>Feature NODE_1_length_345883_cov_22.9161
168 240 tRNA
ID metaerg.pl|00001
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
name tRNA_Asp_gtc;
248 318 tRNA
ID metaerg.pl|00002
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
name tRNA_Gly_tcc;
348 421 tRNA
ID metaerg.pl|00003
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
name tRNA_Ile_gat;
444 534 tRNA
ID metaerg.pl|00004
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
name tRNA_Ser_gct;
555 626 tRNA
ID metaerg.pl|00005
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
name tRNA_Glu_ttc;
650 739 tRNA
ID metaerg.pl|00006
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
name tRNA_Ser_tga;
877 949 tRNA
ID metaerg.pl|00007
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
name tRNA_Asp_gtc;
962 1034 tRNA
ID metaerg.pl|00008
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
name tRNA_Phe_gaa;
1042 1114 tRNA
ID metaerg.pl|00009
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
name tRNA_Gly_tcc;
1761 1258 CDS
ID metaerg.pl|00010
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
tm_num 5;
1761 1258 transmembrane_helix
ID metaerg.pl|00011
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i1282-1341o1354-1422i1456-1551o1579-1647i1660-1728o;
1964 3148 CDS
ID metaerg.pl|00012
allec_ids 2.5.1.6;
allgo_ids GO:0004478; GO:0006556; GO:0005737; GO:0005524; GO:0000287; GO:0006730;
allko_ids K00789;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195319.1 1 390 evalue:3.7e-198 qcov:99.00 identity:89.20;
kegg_pathway_id 00450; 00271;
kegg_pathway_name Selenoamino acid metabolism; Methionine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6151; METHIONINE-DEG1-PWY; PWY-5328; PWY-5041; SAM-PWY; PWY0-781; PWY-6292; MET-SAM-PWY;
metacyc_pathway_name S-adenosyl-L-methionine cycle I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; S-adenosyl-L-methionine cycle II;; S-adenosyl-L-methionine biosynthesis;; aspartate superpathway;; superpathway of L-cysteine biosynthesis (mammalian);; superpathway of S-adenosyl-L-methionine biosynthesis;;
metacyc_pathway_type S-adenosyl-L-methionine-cycle; Super-Pathways;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; S-adenosyl-L-methionine-cycle;; Cofactor-Biosynthesis;; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; Super-Pathways;;
pfam_acc PF02773; PF02772; PF00438;
pfam_desc S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain;
pfam_id S-AdoMet_synt_C; S-AdoMet_synt_M; S-AdoMet_synt_N;
pfam_target db:Pfam-A.hmm|PF02773.16 evalue:1.2e-69 score:231.9 best_domain_score:230.9 name:S-AdoMet_synt_C; db:Pfam-A.hmm|PF02772.16 evalue:2.3e-51 score:172.3 best_domain_score:170.6 name:S-AdoMet_synt_M; db:Pfam-A.hmm|PF00438.20 evalue:3.6e-45 score:151.9 best_domain_score:151.9 name:S-AdoMet_synt_N;
sprot_desc S-adenosylmethionine synthase;
sprot_id sp|A8FGH7|METK_BACP2;
sprot_target db:uniprot_sprot|sp|A8FGH7|METK_BACP2 2 390 evalue:1.3e-162 qcov:98.70 identity:72.10;
tigrfam_acc TIGR01034;
tigrfam_desc methionine adenosyltransferase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name metK;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01034 evalue:1.2e-187 score:622.5 best_domain_score:622.4 name:TIGR01034;
3424 4323 CDS
ID metaerg.pl|00013
allgo_ids GO:0043565;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482396.1 1 298 evalue:2.1e-97 qcov:99.70 identity:68.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13464; PF12844; PF13413;
pfam_desc Domain of unknown function (DUF4115); Helix-turn-helix domain; Helix-turn-helix domain;
pfam_id DUF4115; HTH_19; HTH_25;
pfam_target db:Pfam-A.hmm|PF13464.6 evalue:2.1e-09 score:36.7 best_domain_score:35.6 name:DUF4115; db:Pfam-A.hmm|PF12844.7 evalue:2.6e-08 score:33.0 best_domain_score:31.5 name:HTH_19; db:Pfam-A.hmm|PF13413.6 evalue:1.2e-20 score:72.3 best_domain_score:71.4 name:HTH_25;
tm_num 1;
3424 4323 transmembrane_helix
ID metaerg.pl|00014
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i3760-3828o;
4393 4980 CDS
ID metaerg.pl|00015
allec_ids 2.7.8.5;
allgo_ids GO:0008654; GO:0016020; GO:0016780; GO:0016021; GO:0005886; GO:0008444; GO:0046474; GO:0006655;
allko_ids K00998; K00995;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195313.1 1 195 evalue:3.7e-90 qcov:100.00 identity:88.20;
kegg_pathway_id 00564; 00260;
kegg_pathway_name Glycerophospholipid metabolism; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PHOSLIPSYN2-PWY; PWY-5668; PHOSLIPSYN-PWY; PWY4FS-8; PWY-5269; PWY4FS-7;
metacyc_pathway_name superpathway of phospholipid biosynthesis II (plants);; cardiolipin biosynthesis I;; superpathway of phospholipid biosynthesis I (bacteria);; phosphatidylglycerol biosynthesis II (non-plastidic);; cardiolipin biosynthesis II;; phosphatidylglycerol biosynthesis I (plastidic);;
metacyc_pathway_type Phospholipid-Biosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;;
pfam_acc PF01066;
pfam_desc CDP-alcohol phosphatidyltransferase;
pfam_id CDP-OH_P_transf;
pfam_target db:Pfam-A.hmm|PF01066.21 evalue:1.9e-18 score:66.2 best_domain_score:66.2 name:CDP-OH_P_transf;
sprot_desc CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;
sprot_id sp|P46322|PGSA_BACSU;
sprot_target db:uniprot_sprot|sp|P46322|PGSA_BACSU 2 182 evalue:1.5e-45 qcov:92.80 identity:54.10;
tigrfam_acc TIGR00560;
tigrfam_desc CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name pgsA;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00560 evalue:7.4e-54 score:182.2 best_domain_score:181.9 name:TIGR00560;
tm_num 4;
4393 4980 transmembrane_helix
ID metaerg.pl|00016
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i4411-4470o4513-4581i4642-4710o4861-4929i;
5117 6397 CDS
ID metaerg.pl|00017
allec_ids 3.5.-.-;
allko_ids K03742;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482401.1 1 426 evalue:8.7e-185 qcov:100.00 identity:76.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02464; PF18146; PF00994;
pfam_desc Competence-damaged protein; Damage-inducible protein CinA KH domain; Probable molybdopterin binding domain;
pfam_id CinA; CinA_KH; MoCF_biosynth;
pfam_target db:Pfam-A.hmm|PF02464.17 evalue:3.8e-47 score:159.0 best_domain_score:158.5 name:CinA; db:Pfam-A.hmm|PF18146.1 evalue:2.6e-25 score:87.6 best_domain_score:85.9 name:CinA_KH; db:Pfam-A.hmm|PF00994.24 evalue:2.1e-33 score:114.2 best_domain_score:113.3 name:MoCF_biosynth;
sprot_desc Putative competence-damage inducible protein;
sprot_id sp|A0AIJ9|CINA_LISW6;
sprot_target db:uniprot_sprot|sp|A0AIJ9|CINA_LISW6 3 411 evalue:2.6e-103 qcov:96.00 identity:48.20;
tigrfam_acc TIGR00177; TIGR00199; TIGR00200;
tigrfam_desc molybdenum cofactor synthesis domain; amidohydrolase, PncC family; competence/damage-inducible protein CinA N-terminal domain;
tigrfam_mainrole DNA metabolism; DNA metabolism;
tigrfam_name molyb_syn; PncC_domain; cinA_nterm;
tigrfam_sub1role DNA replication, recombination, and repair; DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00177 evalue:5.3e-27 score:93.7 best_domain_score:92.5 name:TIGR00177; db:TIGRFAMs.hmm|TIGR00199 evalue:3.3e-38 score:130.3 best_domain_score:129.7 name:TIGR00199; db:TIGRFAMs.hmm|TIGR00200 evalue:3e-114 score:381.1 best_domain_score:380.8 name:TIGR00200;
6507 7550 CDS
ID metaerg.pl|00018
allgo_ids GO:0003697; GO:0005524; GO:0006281; GO:0005737; GO:0003684; GO:0008094; GO:0006310; GO:0009432;
allko_ids K03553;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091267217.1 1 347 evalue:2.1e-176 qcov:100.00 identity:93.70;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF06745; PF08423; PF00154;
pfam_desc KaiC; Rad51; recA bacterial DNA recombination protein;
pfam_id ATPase; Rad51; RecA;
pfam_target db:Pfam-A.hmm|PF06745.13 evalue:4.3e-07 score:28.7 best_domain_score:22.8 name:ATPase; db:Pfam-A.hmm|PF08423.11 evalue:3.7e-11 score:42.0 best_domain_score:39.4 name:Rad51; db:Pfam-A.hmm|PF00154.21 evalue:2.9e-143 score:475.3 best_domain_score:475.0 name:RecA;
sprot_desc hypothetical protein;
sprot_id sp|Q6KCJ5|RECA_ENTHA;
sprot_target db:uniprot_sprot|sp|Q6KCJ5|RECA_ENTHA 1 342 evalue:6.7e-150 qcov:98.60 identity:78.70;
tigrfam_acc TIGR02012;
tigrfam_desc protein RecA;
tigrfam_mainrole DNA metabolism;
tigrfam_name tigrfam_recA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02012 evalue:9.3e-170 score:563.2 best_domain_score:563.0 name:TIGR02012;
7795 9357 CDS
ID metaerg.pl|00019
allec_ids 3.1.-.-;
allgo_ids GO:0003723; GO:0016021; GO:0005886; GO:0004521; GO:0006402;
allko_ids K18682;
casgene_acc cd09641_cas3HD_CAS-I;
casgene_name cas3HD;
casgene_target db:casgenes.hmm|cd09641_cas3HD_CAS-I evalue:2.7e-07 score:29.8 best_domain_score:29.8 name:cas3HD;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091267214.1 1 520 evalue:5.0e-259 qcov:100.00 identity:93.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF12072; PF01966; PF08668; PF00013;
pfam_desc Domain of unknown function (DUF3552); HD domain; HDOD domain; KH domain;
pfam_id DUF3552; HD; HDOD; KH_1;
pfam_target db:Pfam-A.hmm|PF12072.8 evalue:4.1e-66 score:221.5 best_domain_score:221.5 name:DUF3552; db:Pfam-A.hmm|PF01966.22 evalue:3.2e-18 score:65.3 best_domain_score:65.3 name:HD; db:Pfam-A.hmm|PF08668.12 evalue:9e-06 score:24.5 best_domain_score:18.5 name:HDOD; db:Pfam-A.hmm|PF00013.29 evalue:4.5e-08 score:32.0 best_domain_score:30.5 name:KH_1;
sprot_desc Ribonuclease Y;
sprot_id sp|A0AIK1|RNY_LISW6;
sprot_target db:uniprot_sprot|sp|A0AIK1|RNY_LISW6 1 520 evalue:1.0e-154 qcov:100.00 identity:67.50;
tigrfam_acc TIGR00277; TIGR03319;
tigrfam_desc HDIG domain; ribonuclease Y;
tigrfam_mainrole Transcription;
tigrfam_name HDIG; RNase_Y;
tigrfam_sub1role Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00277 evalue:1.4e-25 score:88.2 best_domain_score:86.7 name:TIGR00277; db:TIGRFAMs.hmm|TIGR03319 evalue:1e-232 score:772.4 best_domain_score:772.2 name:TIGR03319;
tm_num 1;
7795 9357 transmembrane_helix
ID metaerg.pl|00020
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i7801-7869o;
9497 10303 CDS
ID metaerg.pl|00021
allec_ids 3.1.4.16;
allgo_ids GO:0016787; GO:0005737; GO:0008663; GO:0004113; GO:0046872;
allko_ids K09769;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071847607.1 1 263 evalue:5.4e-116 qcov:98.10 identity:75.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00149; PF13277;
pfam_desc Calcineurin-like phosphoesterase; YmdB-like protein;
pfam_id Metallophos; YmdB;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:1.2e-07 score:31.7 best_domain_score:31.4 name:Metallophos; db:Pfam-A.hmm|PF13277.6 evalue:1.2e-107 score:358.2 best_domain_score:358.0 name:YmdB;
sprot_desc 2',3'-cyclic-nucleotide 2'-phosphodiesterase;
sprot_id sp|O31775|YMDB_BACSU;
sprot_target db:uniprot_sprot|sp|O31775|YMDB_BACSU 1 266 evalue:2.1e-90 qcov:99.30 identity:59.40;
tigrfam_acc TIGR00282;
tigrfam_desc metallophosphoesterase, MG_246/BB_0505 family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00282;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00282 evalue:1.3e-101 score:338.6 best_domain_score:338.4 name:TIGR00282;
10334 12943 CDS
ID metaerg.pl|00022
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0003684;
allko_ids K03555;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195301.1 1 866 evalue:0.0e+00 qcov:99.70 identity:77.30;
kegg_pathway_id 03430;
kegg_pathway_name Mismatch repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01624; PF05188; PF05192; PF05190; PF00488;
pfam_desc MutS domain I; MutS domain II; MutS domain III; MutS family domain IV; MutS domain V;
pfam_id MutS_I; MutS_II; MutS_III; MutS_IV; MutS_V;
pfam_target db:Pfam-A.hmm|PF01624.20 evalue:2.2e-44 score:149.6 best_domain_score:147.9 name:MutS_I; db:Pfam-A.hmm|PF05188.17 evalue:7.2e-12 score:45.0 best_domain_score:45.0 name:MutS_II; db:Pfam-A.hmm|PF05192.18 evalue:1.3e-43 score:148.7 best_domain_score:148.7 name:MutS_III; db:Pfam-A.hmm|PF05190.18 evalue:1.2e-28 score:98.5 best_domain_score:98.5 name:MutS_IV; db:Pfam-A.hmm|PF00488.21 evalue:9.8e-83 score:276.0 best_domain_score:274.3 name:MutS_V;
sprot_desc DNA mismatch repair protein MutS;
sprot_id sp|Q82ZA2|MUTS_ENTFA;
sprot_target db:uniprot_sprot|sp|Q82ZA2|MUTS_ENTFA 1 866 evalue:5.4e-297 qcov:99.70 identity:60.40;
tigrfam_acc TIGR01070;
tigrfam_desc DNA mismatch repair protein MutS;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutS1;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01070 evalue:0 score:1097.1 best_domain_score:1096.9 name:TIGR01070;
12964 14856 CDS
ID metaerg.pl|00023
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0032300; GO:0016887;
allko_ids K06379; K04757; K01768; K02668; K07636; K07653; K07638; K02484; K07642; K08282; K07641; K07646; K03407; K07654;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195298.1 1 630 evalue:5.7e-241 qcov:100.00 identity:67.80;
kegg_pathway_id 02020; 03090; 00230;
kegg_pathway_name Two-component system - General; Type II secretion system; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01119; PF02518; PF13589; PF08676;
pfam_desc DNA mismatch repair protein, C-terminal domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain;
pfam_id DNA_mis_repair; HATPase_c; HATPase_c_3; MutL_C;
pfam_target db:Pfam-A.hmm|PF01119.19 evalue:4.9e-33 score:112.6 best_domain_score:111.4 name:DNA_mis_repair; db:Pfam-A.hmm|PF02518.26 evalue:2.2e-07 score:30.6 best_domain_score:29.0 name:HATPase_c; db:Pfam-A.hmm|PF13589.6 evalue:7.5e-10 score:38.0 best_domain_score:38.0 name:HATPase_c_3; db:Pfam-A.hmm|PF08676.11 evalue:4.9e-46 score:155.4 best_domain_score:152.7 name:MutL_C;
sprot_desc DNA mismatch repair protein MutL;
sprot_id sp|Q03EQ8|MUTL_PEDPA;
sprot_target db:uniprot_sprot|sp|Q03EQ8|MUTL_PEDPA 5 630 evalue:4.8e-178 qcov:99.40 identity:51.40;
tigrfam_acc TIGR00585;
tigrfam_desc DNA mismatch repair protein MutL;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutl;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00585 evalue:4.9e-93 score:311.4 best_domain_score:311.4 name:TIGR00585;
14870 15304 CDS
ID metaerg.pl|00024
allec_ids 1.8.4.12; 1.8.4.-;
allgo_ids GO:0033743; GO:0055114; GO:0030091; GO:0006979;
allko_ids K07304; K07305; K12267;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195296.1 3 143 evalue:2.2e-68 qcov:97.90 identity:87.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01641;
pfam_desc SelR domain;
pfam_id SelR;
pfam_target db:Pfam-A.hmm|PF01641.18 evalue:1.6e-49 score:166.2 best_domain_score:166.0 name:SelR;
sprot_desc Peptide methionine sulfoxide reductase MsrB;
sprot_id sp|P0DM32|MSRB_ENTFA;
sprot_target db:uniprot_sprot|sp|P0DM32|MSRB_ENTFA 5 144 evalue:5.4e-53 qcov:97.20 identity:69.30;
tigrfam_acc TIGR00357;
tigrfam_desc methionine-R-sulfoxide reductase;
tigrfam_mainrole Cellular processes;
tigrfam_name TIGR00357;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00357 evalue:3.3e-60 score:201.1 best_domain_score:200.9 name:TIGR00357;
15402 16016 CDS
ID metaerg.pl|00025
allec_ids 3.6.4.12;
allgo_ids GO:0003677; GO:0009379; GO:0005524; GO:0009378; GO:0006310; GO:0006281; GO:0009432;
allko_ids K03550;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195293.1 1 204 evalue:9.9e-78 qcov:100.00 identity:71.60;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00633; PF14520; PF07499; PF01330;
pfam_desc Helix-hairpin-helix motif; Helix-hairpin-helix domain; RuvA, C-terminal domain; RuvA N terminal domain;
pfam_id HHH; HHH_5; RuvA_C; RuvA_N;
pfam_target db:Pfam-A.hmm|PF00633.23 evalue:5.5e-07 score:28.4 best_domain_score:13.2 name:HHH; db:Pfam-A.hmm|PF14520.6 evalue:6.5e-15 score:54.7 best_domain_score:51.2 name:HHH_5; db:Pfam-A.hmm|PF07499.13 evalue:4.5e-11 score:42.3 best_domain_score:41.3 name:RuvA_C; db:Pfam-A.hmm|PF01330.21 evalue:1e-16 score:60.0 best_domain_score:58.8 name:RuvA_N;
sprot_desc Holliday junction ATP-dependent DNA helicase RuvA;
sprot_id sp|Q38YR0|RUVA_LACSS;
sprot_target db:uniprot_sprot|sp|Q38YR0|RUVA_LACSS 1 204 evalue:8.5e-52 qcov:100.00 identity:53.40;
tigrfam_acc TIGR00084;
tigrfam_desc Holliday junction DNA helicase RuvA;
tigrfam_mainrole DNA metabolism;
tigrfam_name ruvA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00084 evalue:1.5e-51 score:173.8 best_domain_score:173.7 name:TIGR00084;
16056 17069 CDS
ID metaerg.pl|00026
allec_ids 3.6.4.12;
allgo_ids GO:0005524; GO:0003677; GO:0009378; GO:0006310; GO:0006281; GO:0009432;
allko_ids K03551;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195290.1 1 337 evalue:1.6e-165 qcov:100.00 identity:87.50;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00004; PF07728; PF17864; PF01078; PF05491; PF05496; PF00158; PF06068;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); RuvB AAA lid domain; Magnesium chelatase, subunit ChlI; RuvB C-terminal winged helix domain; Holliday junction DNA helicase RuvB P-loop domain; Sigma-54 interaction domain; TIP49 P-loop domain;
pfam_id AAA; AAA_5; AAA_lid_4; Mg_chelatase; RuvB_C; RuvB_N; Sigma54_activat; TIP49;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:7.9e-19 score:67.6 best_domain_score:66.5 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:8.4e-09 score:34.8 best_domain_score:28.8 name:AAA_5; db:Pfam-A.hmm|PF17864.1 evalue:1.4e-33 score:113.7 best_domain_score:111.9 name:AAA_lid_4; db:Pfam-A.hmm|PF01078.21 evalue:1.2e-07 score:30.5 best_domain_score:12.8 name:Mg_chelatase; db:Pfam-A.hmm|PF05491.13 evalue:1.1e-26 score:91.7 best_domain_score:90.6 name:RuvB_C; db:Pfam-A.hmm|PF05496.12 evalue:2e-78 score:260.9 best_domain_score:258.6 name:RuvB_N; db:Pfam-A.hmm|PF00158.26 evalue:5.1e-06 score:25.5 best_domain_score:13.7 name:Sigma54_activat; db:Pfam-A.hmm|PF06068.13 evalue:1.6e-07 score:30.1 best_domain_score:24.7 name:TIP49;
sprot_desc Holliday junction ATP-dependent DNA helicase RuvB;
sprot_id sp|Q839T5|RUVB_ENTFA;
sprot_target db:uniprot_sprot|sp|Q839T5|RUVB_ENTFA 7 334 evalue:3.0e-134 qcov:97.30 identity:70.30;
tigrfam_acc TIGR00635;
tigrfam_desc Holliday junction DNA helicase RuvB;
tigrfam_mainrole DNA metabolism;
tigrfam_name ruvB;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00635 evalue:1.4e-140 score:466.8 best_domain_score:466.6 name:TIGR00635;
17083 18123 CDS
ID metaerg.pl|00027
allec_ids 2.4.99.17;
allgo_ids GO:0008616; GO:0016740; GO:0016853; GO:0005737;
allko_ids K07568;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482417.1 1 345 evalue:4.0e-164 qcov:99.70 identity:84.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02547;
pfam_desc Queuosine biosynthesis protein;
pfam_id Queuosine_synth;
pfam_target db:Pfam-A.hmm|PF02547.15 evalue:3.8e-139 score:462.5 best_domain_score:462.4 name:Queuosine_synth;
sprot_desc S-adenosylmethionine:tRNA ribosyltransferase-isomerase;
sprot_id sp|Q837H2|QUEA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q837H2|QUEA_ENTFA 3 344 evalue:5.3e-147 qcov:98.80 identity:74.30;
tigrfam_acc TIGR00113;
tigrfam_desc S-adenosylmethionine:tRNA ribosyltransferase-isomerase;
tigrfam_mainrole Protein synthesis;
tigrfam_name queA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00113 evalue:2e-140 score:466.8 best_domain_score:466.6 name:TIGR00113;
18141 19286 CDS
ID metaerg.pl|00028
allec_ids 2.4.2.29;
allgo_ids GO:0006400; GO:0016763; GO:0046872; GO:0008479; GO:0008616; GO:0101030;
allko_ids K00773;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195287.1 1 381 evalue:8.0e-214 qcov:100.00 identity:95.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01702;
pfam_desc Queuine tRNA-ribosyltransferase;
pfam_id TGT;
pfam_target db:Pfam-A.hmm|PF01702.18 evalue:3.2e-159 score:529.0 best_domain_score:528.7 name:TGT;
sprot_desc Queuine tRNA-ribosyltransferase;
sprot_id sp|Q837E7|TGT_ENTFA;
sprot_target db:uniprot_sprot|sp|Q837E7|TGT_ENTFA 1 381 evalue:5.6e-190 qcov:100.00 identity:81.10;
tigrfam_acc TIGR00430; TIGR00449;
tigrfam_desc tRNA-guanine transglycosylase; tRNA-guanine family transglycosylase;
tigrfam_mainrole Protein synthesis; Protein synthesis;
tigrfam_name Q_tRNA_tgt; tgt_general;
tigrfam_sub1role tRNA and rRNA base modification; tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00430 evalue:1.6e-178 score:592.4 best_domain_score:592.3 name:TIGR00430; db:TIGRFAMs.hmm|TIGR00449 evalue:4.6e-171 score:567.8 best_domain_score:567.6 name:TIGR00449;
19437 19772 CDS
ID metaerg.pl|00029
allgo_ids GO:0016021; GO:0005886; GO:0015031;
allko_ids K03210;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482421.1 1 111 evalue:4.3e-43 qcov:100.00 identity:88.30;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02699;
pfam_desc Preprotein translocase subunit;
pfam_id YajC;
pfam_target db:Pfam-A.hmm|PF02699.15 evalue:1.5e-27 score:94.5 best_domain_score:94.2 name:YajC;
sp YES;
sprot_desc Sec translocon accessory complex subunit YajC;
sprot_id sp|Q9KDI4|YAJC_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KDI4|YAJC_BACHD 1 85 evalue:6.1e-12 qcov:76.60 identity:43.00;
tigrfam_acc TIGR00739;
tigrfam_desc preprotein translocase, YajC subunit;
tigrfam_mainrole Protein fate;
tigrfam_name yajC;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00739 evalue:5e-21 score:73.8 best_domain_score:73.5 name:TIGR00739;
tm_num 1;
19437 19523 signal_peptide
ID metaerg.pl|00030
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
19437 19772 transmembrane_helix
ID metaerg.pl|00031
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o19446-19502i;
19824 20108 CDS
ID metaerg.pl|00032
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium gilvum;
genomedb_acc GCF_900109085.1;
genomedb_target db:genomedb|GCF_900109085.1|WP_091635769.1 12 94 evalue:4.2e-31 qcov:88.30 identity:72.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13797;
pfam_desc Post-transcriptional regulator;
pfam_id Post_transc_reg;
pfam_target db:Pfam-A.hmm|PF13797.6 evalue:8.7e-23 score:79.2 best_domain_score:79.0 name:Post_transc_reg;
20260 21414 CDS
ID metaerg.pl|00033
allec_ids 2.7.7.7;
allgo_ids GO:0006281; GO:0005737; GO:0003684; GO:0003887; GO:0000287; GO:0006261;
allko_ids K03515; K02346;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195278.1 1 384 evalue:9.3e-178 qcov:100.00 identity:78.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00817; PF11799;
pfam_desc impB/mucB/samB family; impB/mucB/samB family C-terminal domain;
pfam_id IMS; IMS_C;
pfam_target db:Pfam-A.hmm|PF00817.20 evalue:2.6e-52 score:176.1 best_domain_score:172.9 name:IMS; db:Pfam-A.hmm|PF11799.8 evalue:7.1e-18 score:64.6 best_domain_score:63.7 name:IMS_C;
sprot_desc DNA polymerase IV;
sprot_id sp|Q88V07|DPO4_LACPL;
sprot_target db:uniprot_sprot|sp|Q88V07|DPO4_LACPL 14 373 evalue:4.1e-108 qcov:93.80 identity:54.10;
21404 22708 CDS
ID metaerg.pl|00034
allgo_ids GO:0003700; GO:0006355;
allko_ids K00641; K05847; K00088; K00970; K00825; K00974; K02806;
casgene_acc cd09655_casR_CAS-I; cls001593_casR_CAS-I;
casgene_name casR; casR;
casgene_target db:casgenes.hmm|cd09655_casR_CAS-I evalue:2.5e-06 score:26.4 best_domain_score:24.5 name:casR; db:casgenes.hmm|cls001593_casR_CAS-I evalue:3.7e-06 score:25.5 best_domain_score:24.5 name:casR;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195275.1 1 434 evalue:8.5e-204 qcov:100.00 identity:85.70;
kegg_pathway_id 00271; 00920; 00310; 00983; 00230; 02060; 02010; 00300;
kegg_pathway_name Methionine metabolism; Sulfur metabolism; Lysine degradation; Drug metabolism - other enzymes; Purine metabolism; Phosphotransferase system (PTS); ABC transporters - General; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF03061; PF00571; PF07085; PF00392;
pfam_desc Thioesterase superfamily; CBS domain; DRTGG domain; Bacterial regulatory proteins, gntR family;
pfam_id 4HBT; CBS; DRTGG; GntR;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:9.8e-05 score:21.9 best_domain_score:20.7 name:4HBT; db:Pfam-A.hmm|PF00571.28 evalue:4.3e-14 score:51.9 best_domain_score:27.2 name:CBS; db:Pfam-A.hmm|PF07085.12 evalue:1.2e-28 score:98.2 best_domain_score:96.9 name:DRTGG; db:Pfam-A.hmm|PF00392.21 evalue:2.8e-06 score:26.1 best_domain_score:24.2 name:GntR;
sprot_desc hypothetical protein;
sprot_id sp|O34921|YTOI_BACSU;
sprot_target db:uniprot_sprot|sp|O34921|YTOI_BACSU 1 433 evalue:6.5e-110 qcov:99.80 identity:46.60;
22739 23719 CDS
ID metaerg.pl|00035
allec_ids 3.1.-.-;
allgo_ids GO:0003676; GO:0008441; GO:0004527;
allko_ids K06881;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195327.1 7 326 evalue:7.2e-147 qcov:98.20 identity:76.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01368; PF02272;
pfam_desc DHH family; DHHA1 domain;
pfam_id DHH; DHHA1;
pfam_target db:Pfam-A.hmm|PF01368.20 evalue:2.6e-13 score:49.3 best_domain_score:48.3 name:DHH; db:Pfam-A.hmm|PF02272.19 evalue:1.8e-11 score:43.8 best_domain_score:42.3 name:DHHA1;
sprot_desc Probable bifunctional oligoribonuclease and PAP phosphatase NrnA;
sprot_id sp|Q8DTN6|NRNA_STRMU;
sprot_target db:uniprot_sprot|sp|Q8DTN6|NRNA_STRMU 21 318 evalue:2.4e-80 qcov:91.40 identity:50.00;
23791 25908 CDS
ID metaerg.pl|00036
allec_ids 2.4.1.129; 3.4.16.4;
allgo_ids GO:0008658; GO:0016021; GO:0005886; GO:0008144; GO:0008955; GO:0009002; GO:0071555; GO:0009252; GO:0008360; GO:0046677;
allko_ids K05367; K08884; K04478; K05366; K08282; K03587; K12555; K03814; K12556; K05365; K08384; K05364;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195272.1 1 705 evalue:0.0e+00 qcov:100.00 identity:76.60;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6470; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-5265; PWY-6385;
metacyc_pathway_name peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis III (mycobacteria);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00912; PF00905;
pfam_desc Transglycosylase; Penicillin binding protein transpeptidase domain;
pfam_id Transgly; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF00912.22 evalue:5.3e-60 score:201.1 best_domain_score:200.3 name:Transgly; db:Pfam-A.hmm|PF00905.22 evalue:4e-36 score:124.0 best_domain_score:122.1 name:Transpeptidase;
sprot_desc Penicillin-binding protein 1F;
sprot_id sp|P38050|PBPF_BACSU;
sprot_target db:uniprot_sprot|sp|P38050|PBPF_BACSU 45 626 evalue:2.3e-104 qcov:82.60 identity:39.00;
tigrfam_acc TIGR02074;
tigrfam_desc penicillin-binding protein, 1A family;
tigrfam_mainrole Cell envelope;
tigrfam_name PBP_1a_fam;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR02074 evalue:5.5e-179 score:595.5 best_domain_score:595.1 name:TIGR02074;
tm_num 1;
23791 25908 transmembrane_helix
ID metaerg.pl|00037
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i23911-23979o;
26009 26350 CDS
ID metaerg.pl|00038
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034303554.1 1 113 evalue:1.4e-44 qcov:100.00 identity:90.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF06133;
pfam_desc Control of competence regulator ComK, YlbF/YmcA;
pfam_id Com_YlbF;
pfam_target db:Pfam-A.hmm|PF06133.11 evalue:5.8e-26 score:90.4 best_domain_score:90.2 name:Com_YlbF;
sprot_desc hypothetical protein;
sprot_id sp|Q03GD8|Y673_PEDPA;
sprot_target db:uniprot_sprot|sp|Q03GD8|Y673_PEDPA 1 113 evalue:3.5e-23 qcov:100.00 identity:46.00;
26441 27667 CDS
ID metaerg.pl|00039
allgo_ids GO:0016787; GO:0046872;
allko_ids K03547;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195267.1 1 407 evalue:1.1e-123 qcov:99.80 identity:54.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:3.9e-12 score:46.3 best_domain_score:45.4 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:2.8e-09 score:36.6 best_domain_score:34.9 name:Metallophos_2;
sprot_desc Uncharacterized metallophosphoesterase YhaO;
sprot_id sp|O07522|YHAO_BACSU;
sprot_target db:uniprot_sprot|sp|O07522|YHAO_BACSU 4 404 evalue:1.1e-50 qcov:98.30 identity:31.20;
27669 30476 CDS
ID metaerg.pl|00040
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195264.1 1 929 evalue:1.1e-227 qcov:99.40 identity:47.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13514;
pfam_desc AAA domain;
pfam_id AAA_27;
pfam_target db:Pfam-A.hmm|PF13514.6 evalue:4.3e-22 score:78.0 best_domain_score:78.0 name:AAA_27;
sprot_desc hypothetical protein;
sprot_id sp|O08455|YHAN_BACSU;
sprot_target db:uniprot_sprot|sp|O08455|YHAN_BACSU 1 930 evalue:1.7e-38 qcov:99.50 identity:23.50;
tm_num 1;
27669 30476 transmembrane_helix
ID metaerg.pl|00041
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i29007-29075o;
30497 31465 CDS
ID metaerg.pl|00042
allec_ids 3.1.-.-;
allgo_ids GO:0003676; GO:0000175;
allko_ids K03698;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482436.1 2 322 evalue:1.1e-155 qcov:99.70 identity:83.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01966; PF01336;
pfam_desc HD domain; OB-fold nucleic acid binding domain;
pfam_id HD; tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:1e-11 score:44.4 best_domain_score:43.5 name:HD; db:Pfam-A.hmm|PF01336.25 evalue:1.8e-06 score:27.1 best_domain_score:26.1 name:tRNA_anti-codon;
sprot_desc 3'-5' exoribonuclease YhaM;
sprot_id sp|B7IK95|YHAM_BACC2;
sprot_target db:uniprot_sprot|sp|B7IK95|YHAM_BACC2 1 311 evalue:1.1e-85 qcov:96.60 identity:48.60;
31625 32668 CDS
ID metaerg.pl|00043
allgo_ids GO:0003755;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195258.1 1 346 evalue:2.1e-136 qcov:99.70 identity:77.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00639; PF13145; PF13616;
pfam_desc PPIC-type PPIASE domain; PPIC-type PPIASE domain; PPIC-type PPIASE domain;
pfam_id Rotamase; Rotamase_2; Rotamase_3;
pfam_target db:Pfam-A.hmm|PF00639.21 evalue:4.5e-16 score:58.8 best_domain_score:56.7 name:Rotamase; db:Pfam-A.hmm|PF13145.6 evalue:1.6e-06 score:28.2 best_domain_score:28.2 name:Rotamase_2; db:Pfam-A.hmm|PF13616.6 evalue:2.6e-14 score:53.0 best_domain_score:51.4 name:Rotamase_3;
sp YES;
31625 31678 lipoprotein_signal_peptide
ID metaerg.pl|00044
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
33079 32726 CDS
ID metaerg.pl|00045
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195255.1 1 114 evalue:4.0e-39 qcov:97.40 identity:75.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF12732;
pfam_desc YtxH-like protein;
pfam_id YtxH;
pfam_target db:Pfam-A.hmm|PF12732.7 evalue:9.2e-13 score:47.8 best_domain_score:43.5 name:YtxH;
sp YES;
tm_num 1;
32726 32806 signal_peptide
ID metaerg.pl|00046
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
33079 32726 transmembrane_helix
ID metaerg.pl|00047
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o32735-32788i;
33519 33082 CDS
ID metaerg.pl|00048
allgo_ids GO:0003824; GO:0009117;
allko_ids K02503;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264708.1 1 144 evalue:3.5e-61 qcov:99.30 identity:78.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF11969; PF01230;
pfam_desc Scavenger mRNA decapping enzyme C-term binding; HIT domain;
pfam_id DcpS_C; HIT;
pfam_target db:Pfam-A.hmm|PF11969.8 evalue:1.9e-12 score:46.9 best_domain_score:46.5 name:DcpS_C; db:Pfam-A.hmm|PF01230.23 evalue:2.3e-23 score:82.0 best_domain_score:81.6 name:HIT;
sprot_desc hypothetical protein;
sprot_id sp|O07513|HIT_BACSU;
sprot_target db:uniprot_sprot|sp|O07513|HIT_BACSU 4 142 evalue:1.3e-38 qcov:95.90 identity:56.80;
33661 34395 CDS
ID metaerg.pl|00049
allgo_ids GO:0005524; GO:0016887; GO:0030420; GO:0030435;
allko_ids K05816; K02049; K01995; K10111; K11962; K01990; K02023; K05847; K02010; K02006; K02052; K02045; K01996; K06861; K02071;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264706.1 1 244 evalue:2.2e-108 qcov:100.00 identity:78.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.7e-14 score:52.5 best_domain_score:39.2 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:5.3e-30 score:103.9 best_domain_score:103.5 name:ABC_tran;
sprot_desc ABC-type transporter ATP-binding protein EcsA;
sprot_id sp|P55339|ECSA_BACSU;
sprot_target db:uniprot_sprot|sp|P55339|ECSA_BACSU 3 242 evalue:3.4e-79 qcov:98.40 identity:58.80;
34396 35595 CDS
ID metaerg.pl|00050
allgo_ids GO:0016021;
allko_ids K01992;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195247.1 1 398 evalue:2.0e-111 qcov:99.70 identity:54.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF05975;
pfam_desc Bacterial ABC transporter protein EcsB;
pfam_id EcsB;
pfam_target db:Pfam-A.hmm|PF05975.12 evalue:8.2e-89 score:297.3 best_domain_score:297.1 name:EcsB;
tm_num 8;
34396 35595 transmembrane_helix
ID metaerg.pl|00051
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i34456-34524o34567-34635i34702-34770o34798-34866i34924-35019o35221-35289i35302-35370o35509-35577i;
35615 36478 CDS
ID metaerg.pl|00052
allec_ids 2.6.1.21;
allgo_ids GO:0003824; GO:0047810; GO:0030170; GO:0046416;
allko_ids K00826; K00824;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195243.1 1 284 evalue:2.4e-130 qcov:99.00 identity:78.20;
kegg_pathway_id 00290; 00310; 00550; 00280; 00770; 00472; 00330; 00473; 00360;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Lysine degradation; Peptidoglycan biosynthesis; Valine, leucine and isoleucine degradation; Pantothenate and CoA biosynthesis; D-Arginine and D-ornithine metabolism; Arginine and proline metabolism; D-Alanine metabolism; Phenylalanine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01063;
pfam_desc Amino-transferase class IV;
pfam_id Aminotran_4;
pfam_target db:Pfam-A.hmm|PF01063.19 evalue:1.2e-41 score:142.3 best_domain_score:142.0 name:Aminotran_4;
sprot_desc D-alanine aminotransferase;
sprot_id sp|Q71Z49|DAAA_LISMF;
sprot_target db:uniprot_sprot|sp|Q71Z49|DAAA_LISMF 1 284 evalue:1.0e-79 qcov:99.00 identity:50.20;
tigrfam_acc TIGR01121;
tigrfam_desc D-amino-acid transaminase;
tigrfam_mainrole Energy metabolism;
tigrfam_name D_amino_aminoT;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01121 evalue:1.5e-110 score:367.9 best_domain_score:367.7 name:TIGR01121;
36591 37376 CDS
ID metaerg.pl|00053
allec_ids 2.7.-.-;
allgo_ids GO:0005524; GO:0016301;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195240.1 1 259 evalue:2.1e-104 qcov:99.20 identity:69.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01636; PF01633;
pfam_desc Phosphotransferase enzyme family; Choline/ethanolamine kinase;
pfam_id APH; Choline_kinase;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:1.4e-14 score:53.8 best_domain_score:53.3 name:APH; db:Pfam-A.hmm|PF01633.20 evalue:5.2e-07 score:28.7 best_domain_score:23.7 name:Choline_kinase;
sprot_desc Putative phosphotransferase YtmP;
sprot_id sp|C0SPC1|YTMP_BACSU;
sprot_target db:uniprot_sprot|sp|C0SPC1|YTMP_BACSU 61 253 evalue:6.9e-30 qcov:73.90 identity:35.70;
37420 38055 CDS
ID metaerg.pl|00054
allec_ids 2.1.1.33;
allgo_ids GO:0008168; GO:0008176;
allko_ids K03439;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264699.1 1 211 evalue:3.5e-94 qcov:100.00 identity:80.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF08241; PF08242; PF13649; PF13847; PF02390; PF05175;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Putative methyltransferase ; Methyltransferase small domain;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_25; Methyltransf_31; Methyltransf_4; MTS;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:9.8e-05 score:22.2 best_domain_score:21.3 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.6e-09 score:37.6 best_domain_score:31.7 name:Methyltransf_12; db:Pfam-A.hmm|PF13649.6 evalue:1e-08 score:35.0 best_domain_score:33.4 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:4.9e-07 score:28.9 best_domain_score:28.6 name:Methyltransf_31; db:Pfam-A.hmm|PF02390.17 evalue:1.7e-48 score:163.6 best_domain_score:163.3 name:Methyltransf_4; db:Pfam-A.hmm|PF05175.14 evalue:8.8e-05 score:21.3 best_domain_score:21.0 name:MTS;
sprot_desc tRNA (guanine-N(7)-)-methyltransferase;
sprot_id sp|C5D6C2|TRMB_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D6C2|TRMB_GEOSW 1 211 evalue:4.3e-75 qcov:100.00 identity:63.50;
tigrfam_acc TIGR00091;
tigrfam_desc tRNA (guanine-N(7)-)-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00091;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00091 evalue:3.6e-58 score:195.3 best_domain_score:195.1 name:TIGR00091;
38470 38117 CDS
ID metaerg.pl|00055
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034302566.1 1 117 evalue:1.5e-41 qcov:100.00 identity:71.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF03413;
pfam_desc Peptidase propeptide and YPEB domain;
pfam_id PepSY;
pfam_target db:Pfam-A.hmm|PF03413.19 evalue:7.2e-07 score:28.9 best_domain_score:28.6 name:PepSY;
tm_num 1;
38470 38117 transmembrane_helix
ID metaerg.pl|00056
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o38159-38227i;
38664 39734 CDS
ID metaerg.pl|00057
allec_ids 3.4.11.7;
allgo_ids GO:0016787; GO:0004177; GO:0046872;
allko_ids K01179; K01261;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190795.1 1 356 evalue:1.7e-181 qcov:100.00 identity:87.10;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01546; PF04389; PF05343;
pfam_desc Peptidase family M20/M25/M40; Peptidase family M28; M42 glutamyl aminopeptidase;
pfam_id Peptidase_M20; Peptidase_M28; Peptidase_M42;
pfam_target db:Pfam-A.hmm|PF01546.28 evalue:3.1e-08 score:32.8 best_domain_score:31.3 name:Peptidase_M20; db:Pfam-A.hmm|PF04389.17 evalue:1.5e-06 score:27.3 best_domain_score:20.2 name:Peptidase_M28; db:Pfam-A.hmm|PF05343.14 evalue:4.5e-97 score:323.8 best_domain_score:323.6 name:Peptidase_M42;
sprot_desc Glutamyl aminopeptidase;
sprot_id sp|Q48677|PEPA_LACLM;
sprot_target db:uniprot_sprot|sp|Q48677|PEPA_LACLM 4 356 evalue:5.6e-99 qcov:99.20 identity:51.70;
tigrfam_acc TIGR03107;
tigrfam_desc glutamyl aminopeptidase;
tigrfam_mainrole Protein fate;
tigrfam_name glu_aminopep;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR03107 evalue:3.9e-162 score:538.2 best_domain_score:538.0 name:TIGR03107;
39760 40365 CDS
ID metaerg.pl|00058
allgo_ids GO:0000049;
allko_ids K06878;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190793.1 1 199 evalue:1.4e-68 qcov:99.00 identity:66.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF14794; PF01588;
pfam_desc Domain of unknown function (DUF4479); Putative tRNA binding domain;
pfam_id DUF4479; tRNA_bind;
pfam_target db:Pfam-A.hmm|PF14794.6 evalue:4.1e-17 score:61.0 best_domain_score:60.1 name:DUF4479; db:Pfam-A.hmm|PF01588.20 evalue:2.4e-20 score:71.7 best_domain_score:71.0 name:tRNA_bind;
sprot_desc Putative tRNA-binding protein YtpR;
sprot_id sp|O34943|YTPR_BACSU;
sprot_target db:uniprot_sprot|sp|O34943|YTPR_BACSU 6 201 evalue:7.6e-37 qcov:97.50 identity:45.50;
40409 40987 CDS
ID metaerg.pl|00059
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium subtropicum;
genomedb_acc GCF_900112455.1;
genomedb_target db:genomedb|GCF_900112455.1|WP_091527706.1 1 192 evalue:1.6e-37 qcov:100.00 identity:46.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
41086 42414 CDS
ID metaerg.pl|00060
allec_ids 6.3.2.8;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0008763; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01928; K02558; K01925; K01929; K01924;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190788.1 1 441 evalue:8.9e-225 qcov:99.80 identity:86.80;
kegg_pathway_id 00550; 00300; 00471;
kegg_pathway_name Peptidoglycan biosynthesis; Lysine biosynthesis; D-Glutamine and D-glutamate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6387; PWY-6385; PWY-5265; PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6386; PWY-6470;
metacyc_pathway_name UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01225; PF02875; PF08245;
pfam_desc Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase; Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF01225.25 evalue:4.1e-24 score:84.0 best_domain_score:83.1 name:Mur_ligase; db:Pfam-A.hmm|PF02875.21 evalue:3.8e-19 score:68.0 best_domain_score:63.6 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:1.5e-26 score:92.8 best_domain_score:90.1 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramate--L-alanine ligase;
sprot_id sp|Q833N6|MURC_ENTFA;
sprot_target db:uniprot_sprot|sp|Q833N6|MURC_ENTFA 2 442 evalue:2.1e-172 qcov:99.80 identity:65.40;
tigrfam_acc TIGR01082;
tigrfam_desc UDP-N-acetylmuramate--L-alanine ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murC;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01082 evalue:2.3e-126 score:421.6 best_domain_score:421.4 name:TIGR01082;
42555 45218 CDS
ID metaerg.pl|00061
allec_ids 2.7.7.7;
allgo_ids GO:0003677; GO:0003824; GO:0008408; GO:0003887; GO:0006281; GO:0006261;
allko_ids K02349; K02332; K02334; K02335;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190785.1 1 887 evalue:0.0e+00 qcov:100.00 identity:82.50;
kegg_pathway_id 00230; 03030; 00240; 03410; 03440; 03420;
kegg_pathway_name Purine metabolism; DNA replication; Pyrimidine metabolism; Base excision repair; Homologous recombination; Nucleotide excision repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01367; PF02739; PF00476;
pfam_desc 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A;
pfam_id 5_3_exonuc; 5_3_exonuc_N; DNA_pol_A;
pfam_target db:Pfam-A.hmm|PF01367.20 evalue:7.3e-34 score:115.5 best_domain_score:115.5 name:5_3_exonuc; db:Pfam-A.hmm|PF02739.16 evalue:3.6e-51 score:172.4 best_domain_score:170.6 name:5_3_exonuc_N; db:Pfam-A.hmm|PF00476.20 evalue:1.3e-160 score:533.8 best_domain_score:532.6 name:DNA_pol_A;
sprot_desc DNA polymerase I;
sprot_id sp|Q04957|DPO1_BACCA;
sprot_target db:uniprot_sprot|sp|Q04957|DPO1_BACCA 4 887 evalue:1.2e-267 qcov:99.70 identity:54.10;
tigrfam_acc TIGR00593;
tigrfam_desc DNA polymerase I;
tigrfam_mainrole DNA metabolism;
tigrfam_name pola;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00593 evalue:0 score:1093.9 best_domain_score:1093.7 name:TIGR00593;
45285 46109 CDS
ID metaerg.pl|00062
allec_ids 3.2.2.23;
allgo_ids GO:0003684; GO:0003906; GO:0006284; GO:0008270; GO:0016799; GO:0140078; GO:0008534; GO:0006289;
allko_ids K05522; K10563;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091487655.1 1 272 evalue:2.9e-93 qcov:99.30 identity:63.60;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01149; PF06831; PF06827;
pfam_desc Formamidopyrimidine-DNA glycosylase N-terminal domain; Formamidopyrimidine-DNA glycosylase H2TH domain; Zinc finger found in FPG and IleRS;
pfam_id Fapy_DNA_glyco; H2TH; zf-FPG_IleRS;
pfam_target db:Pfam-A.hmm|PF01149.24 evalue:4.6e-33 score:113.5 best_domain_score:112.9 name:Fapy_DNA_glyco; db:Pfam-A.hmm|PF06831.14 evalue:4.6e-29 score:99.5 best_domain_score:98.7 name:H2TH; db:Pfam-A.hmm|PF06827.14 evalue:9.5e-12 score:43.8 best_domain_score:43.0 name:zf-FPG_IleRS;
sprot_desc Formamidopyrimidine-DNA glycosylase;
sprot_id sp|Q837G3|FPG_ENTFA;
sprot_target db:uniprot_sprot|sp|Q837G3|FPG_ENTFA 1 272 evalue:4.5e-72 qcov:99.30 identity:49.30;
tigrfam_acc TIGR00577;
tigrfam_desc DNA-formamidopyrimidine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name fpg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00577 evalue:5.4e-100 score:333.4 best_domain_score:333.2 name:TIGR00577;
46129 46749 CDS
ID metaerg.pl|00063
allec_ids 2.7.1.24;
allgo_ids GO:0004140; GO:0005524; GO:0015937; GO:0005737;
allko_ids K00859;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190781.1 1 198 evalue:8.0e-51 qcov:96.10 identity:52.50;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-4242; PANTOSYN-PWY; COA-PWY; PWY-4221;
metacyc_pathway_name ; superpathway of coenzyme A biosynthesis I (bacteria);; coenzyme A biosynthesis I (prokaryotic);; superpathway of coenzyme A biosynthesis II (plants);;
metacyc_pathway_type ; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; CoA-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;;
pfam_acc PF01121;
pfam_desc Dephospho-CoA kinase;
pfam_id CoaE;
pfam_target db:Pfam-A.hmm|PF01121.20 evalue:1.4e-60 score:203.3 best_domain_score:202.7 name:CoaE;
sprot_desc Dephospho-CoA kinase;
sprot_id sp|Q72ZF3|COAE_BACC1;
sprot_target db:uniprot_sprot|sp|Q72ZF3|COAE_BACC1 1 189 evalue:1.9e-46 qcov:91.70 identity:51.90;
tigrfam_acc TIGR00152;
tigrfam_desc dephospho-CoA kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00152;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00152 evalue:8.6e-60 score:201.0 best_domain_score:200.8 name:TIGR00152;
46785 47258 CDS
ID metaerg.pl|00064
allgo_ids GO:0005524; GO:0003677; GO:0008270; GO:0045892;
allko_ids K00527; K07738;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190778.1 1 155 evalue:2.4e-76 qcov:98.70 identity:92.90;
kegg_pathway_id 00240; 00230;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF03477;
pfam_desc ATP cone domain;
pfam_id ATP-cone;
pfam_target db:Pfam-A.hmm|PF03477.16 evalue:7.2e-22 score:77.0 best_domain_score:76.5 name:ATP-cone;
sprot_desc Transcriptional repressor NrdR;
sprot_id sp|B3WF53|NRDR_LACCB;
sprot_target db:uniprot_sprot|sp|B3WF53|NRDR_LACCB 1 152 evalue:1.4e-54 qcov:96.80 identity:67.10;
tigrfam_acc TIGR00244;
tigrfam_desc transcriptional regulator NrdR;
tigrfam_mainrole Regulatory functions;
tigrfam_name TIGR00244;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00244 evalue:2.4e-64 score:215.0 best_domain_score:214.8 name:TIGR00244;
47274 48659 CDS
ID metaerg.pl|00065
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190776.1 1 461 evalue:2.3e-159 qcov:100.00 identity:63.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF07261;
pfam_desc Replication initiation and membrane attachment;
pfam_id DnaB_2;
pfam_target db:Pfam-A.hmm|PF07261.11 evalue:1e-10 score:40.4 best_domain_score:38.5 name:DnaB_2;
48662 49591 CDS
ID metaerg.pl|00066
allgo_ids GO:0005524; GO:1990077; GO:0006260; GO:0006269; GO:0006271;
allko_ids K11144;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482462.1 1 309 evalue:2.3e-134 qcov:100.00 identity:78.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00004; PF03969; PF00308; PF07319; PF01695; PF00910;
pfam_desc ATPase family associated with various cellular activities (AAA); AFG1-like ATPase; Bacterial dnaA protein; Primosomal protein DnaI N-terminus; IstB-like ATP binding protein; RNA helicase;
pfam_id AAA; AFG1_ATPase; Bac_DnaA; DnaI_N; IstB_IS21; RNA_helicase;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:2.6e-05 score:23.9 best_domain_score:21.6 name:AAA; db:Pfam-A.hmm|PF03969.16 evalue:1.8e-06 score:26.3 best_domain_score:25.6 name:AFG1_ATPase; db:Pfam-A.hmm|PF00308.18 evalue:2.1e-07 score:30.2 best_domain_score:29.1 name:Bac_DnaA; db:Pfam-A.hmm|PF07319.11 evalue:2e-27 score:94.9 best_domain_score:92.2 name:DnaI_N; db:Pfam-A.hmm|PF01695.17 evalue:8.1e-11 score:41.2 best_domain_score:39.8 name:IstB_IS21; db:Pfam-A.hmm|PF00910.22 evalue:6.9e-06 score:25.6 best_domain_score:24.6 name:RNA_helicase;
sprot_desc Primosomal protein DnaI;
sprot_id sp|P06567|DNAI_BACSU;
sprot_target db:uniprot_sprot|sp|P06567|DNAI_BACSU 25 308 evalue:2.5e-63 qcov:91.90 identity:42.80;
49914 51845 CDS
ID metaerg.pl|00067
allec_ids 6.1.1.3;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0046872; GO:0004829; GO:0000049; GO:0006435;
allko_ids K01868;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482464.1 1 643 evalue:0.0e+00 qcov:100.00 identity:89.00;
kegg_pathway_id 00970; 00260;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03129; PF02824; PF00587; PF07973;
pfam_desc Anticodon binding domain; TGS domain; tRNA synthetase class II core domain (G, H, P, S and T); Threonyl and Alanyl tRNA synthetase second additional domain;
pfam_id HGTP_anticodon; TGS; tRNA-synt_2b; tRNA_SAD;
pfam_target db:Pfam-A.hmm|PF03129.20 evalue:1.5e-23 score:81.9 best_domain_score:79.2 name:HGTP_anticodon; db:Pfam-A.hmm|PF02824.21 evalue:4.6e-15 score:54.6 best_domain_score:52.7 name:TGS; db:Pfam-A.hmm|PF00587.25 evalue:2.4e-31 score:108.3 best_domain_score:107.4 name:tRNA-synt_2b; db:Pfam-A.hmm|PF07973.14 evalue:1.2e-16 score:59.8 best_domain_score:58.6 name:tRNA_SAD;
sprot_desc Threonine--tRNA ligase;
sprot_id sp|Q830D0|SYT_ENTFA;
sprot_target db:uniprot_sprot|sp|Q830D0|SYT_ENTFA 4 640 evalue:9.8e-296 qcov:99.10 identity:75.50;
tigrfam_acc TIGR00418;
tigrfam_desc threonine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name thrS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00418 evalue:4.7e-231 score:767.7 best_domain_score:767.4 name:TIGR00418;
52073 52597 CDS
ID metaerg.pl|00068
allgo_ids GO:0006413; GO:0005737; GO:0003743;
allko_ids K02520;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264672.1 1 174 evalue:6.7e-83 qcov:100.00 identity:93.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00707; PF05198;
pfam_desc Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain;
pfam_id IF3_C; IF3_N;
pfam_target db:Pfam-A.hmm|PF00707.22 evalue:6.6e-39 score:131.0 best_domain_score:130.4 name:IF3_C; db:Pfam-A.hmm|PF05198.16 evalue:4.2e-32 score:109.5 best_domain_score:109.5 name:IF3_N;
sprot_desc Translation initiation factor IF-3;
sprot_id sp|Q837C9|IF3_ENTFA;
sprot_target db:uniprot_sprot|sp|Q837C9|IF3_ENTFA 3 174 evalue:3.8e-69 qcov:98.90 identity:76.70;
tigrfam_acc TIGR00168;
tigrfam_desc translation initiation factor IF-3;
tigrfam_mainrole Protein synthesis;
tigrfam_name infC;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00168 evalue:8.5e-72 score:239.3 best_domain_score:239.1 name:TIGR00168;
52659 52859 CDS
ID metaerg.pl|00069
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02916;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264670.1 1 66 evalue:5.0e-23 qcov:100.00 identity:95.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01632;
pfam_desc Ribosomal protein L35;
pfam_id Ribosomal_L35p;
pfam_target db:Pfam-A.hmm|PF01632.19 evalue:1.4e-22 score:79.2 best_domain_score:79.0 name:Ribosomal_L35p;
sprot_desc 50S ribosomal protein L35;
sprot_id sp|B7GGV1|RL35_ANOFW;
sprot_target db:uniprot_sprot|sp|B7GGV1|RL35_ANOFW 1 66 evalue:8.1e-20 qcov:100.00 identity:80.30;
tigrfam_GO GO:0000315;
tigrfam_acc TIGR00001;
tigrfam_desc ribosomal protein bL35;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpmI_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00001 evalue:2.9e-21 score:74.7 best_domain_score:74.5 name:TIGR00001;
52897 53256 CDS
ID metaerg.pl|00070
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843; GO:0000027;
allko_ids K02887;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264668.1 1 118 evalue:7.6e-54 qcov:99.20 identity:95.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00453;
pfam_desc Ribosomal protein L20;
pfam_id Ribosomal_L20;
pfam_target db:Pfam-A.hmm|PF00453.18 evalue:2.5e-48 score:161.8 best_domain_score:161.7 name:Ribosomal_L20;
sprot_desc 50S ribosomal protein L20;
sprot_id sp|Q837C7|RL20_ENTFA;
sprot_target db:uniprot_sprot|sp|Q837C7|RL20_ENTFA 1 118 evalue:5.3e-46 qcov:99.20 identity:81.40;
tigrfam_acc TIGR01032;
tigrfam_desc ribosomal protein bL20;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplT_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01032 evalue:1.3e-48 score:163.1 best_domain_score:163.0 name:TIGR01032;
53504 54904 CDS
ID metaerg.pl|00071
allec_ids 1.3.3.4;
allgo_ids GO:0016491; GO:0055114; GO:0009507; GO:0009941; GO:0005739; GO:0009536; GO:0004729; GO:0015995; GO:0009793; GO:0006782;
allko_ids K00231;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190762.1 1 466 evalue:1.7e-210 qcov:100.00 identity:77.50;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id HEME-BIOSYNTHESIS-II; PWY0-1415; PWY-5920; PWY-5918; CHLOROPHYLL-SYN; PWY-5529; PWY-5531;
metacyc_pathway_name heme b biosynthesis I (aerobic);; superpathway of heme b biosynthesis from uroporphyrinogen-III;; superpathway of b heme biosynthesis from glycine;; superpathay of heme b biosynthesis from glutamate;; 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);; superpathway of bacteriochlorophyll a biosynthesis;; 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);;
metacyc_pathway_type Heme-b-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;;
pfam_acc PF01593; PF01266; PF13450;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; NAD(P)-binding Rossmann-like domain;
pfam_id Amino_oxidase; DAO; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:1.2e-44 score:152.6 best_domain_score:152.4 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:5e-08 score:32.1 best_domain_score:27.9 name:DAO; db:Pfam-A.hmm|PF13450.6 evalue:1.7e-11 score:43.4 best_domain_score:42.6 name:NAD_binding_8;
sprot_desc Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial;
sprot_id sp|Q8S9J1|PPOCM_ARATH;
sprot_target db:uniprot_sprot|sp|Q8S9J1|PPOCM_ARATH 4 464 evalue:2.5e-22 qcov:98.90 identity:20.10;
tigrfam_acc TIGR00562;
tigrfam_desc protoporphyrinogen oxidase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name proto_IX_ox;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00562 evalue:2.3e-68 score:230.1 best_domain_score:228.4 name:TIGR00562;
55037 55780 CDS
ID metaerg.pl|00072
allec_ids 3.-.-.-;
allgo_ids GO:0016787; GO:0046872;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264662.1 1 247 evalue:3.0e-105 qcov:100.00 identity:73.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00753; PF12706;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:5.7e-11 score:42.0 best_domain_score:41.8 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:4.1e-18 score:64.9 best_domain_score:64.4 name:Lactamase_B_2;
sprot_desc Probable metallo-hydrolase YhfI;
sprot_id sp|O07607|YHFI_BACSU;
sprot_target db:uniprot_sprot|sp|O07607|YHFI_BACSU 1 228 evalue:6.0e-52 qcov:92.30 identity:44.50;
55793 56812 CDS
ID metaerg.pl|00073
allec_ids 6.3.1.20;
allgo_ids GO:0006464; GO:0005737; GO:0005524; GO:0016979; GO:0017118; GO:0009249;
allko_ids K03800;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000091.1_14 1 339 evalue:1.9e-166 qcov:100.00 identity:84.70;
kegg_pathway_id 00785;
kegg_pathway_name Lipoic acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF03099; PF10437;
pfam_desc Biotin/lipoate A/B protein ligase family; Bacterial lipoate protein ligase C-terminus;
pfam_id BPL_LplA_LipB; Lip_prot_lig_C;
pfam_target db:Pfam-A.hmm|PF03099.19 evalue:1.3e-10 score:40.5 best_domain_score:39.2 name:BPL_LplA_LipB; db:Pfam-A.hmm|PF10437.9 evalue:7e-29 score:98.9 best_domain_score:97.1 name:Lip_prot_lig_C;
sprot_desc Lipoate-protein ligase LplJ;
sprot_id sp|O07608|LPLJ_BACSU;
sprot_target db:uniprot_sprot|sp|O07608|LPLJ_BACSU 9 339 evalue:5.5e-104 qcov:97.60 identity:54.10;
tigrfam_acc TIGR00545;
tigrfam_desc lipoyltransferase and lipoate-protein ligase;
tigrfam_mainrole Protein fate;
tigrfam_name lipoyltrans;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00545 evalue:2.6e-110 score:367.8 best_domain_score:367.5 name:TIGR00545;
57099 57506 CDS
ID metaerg.pl|00074
allgo_ids GO:0009055; GO:0015035; GO:0045454; GO:0005737; GO:0045892;
allko_ids K16509;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190756.1 1 135 evalue:2.5e-61 qcov:100.00 identity:90.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF03960; PF00462;
pfam_desc ArsC family; Glutaredoxin;
pfam_id ArsC; Glutaredoxin;
pfam_target db:Pfam-A.hmm|PF03960.15 evalue:1.4e-25 score:88.4 best_domain_score:88.0 name:ArsC; db:Pfam-A.hmm|PF00462.24 evalue:1.2e-07 score:31.1 best_domain_score:28.3 name:Glutaredoxin;
sprot_desc Regulatory protein Spx;
sprot_id sp|P60377|SPX_LISIN;
sprot_target db:uniprot_sprot|sp|P60377|SPX_LISIN 1 130 evalue:1.6e-46 qcov:96.30 identity:67.70;
tigrfam_acc TIGR01617;
tigrfam_desc transcriptional regulator, Spx/MgsR family;
tigrfam_mainrole Regulatory functions;
tigrfam_name arsC_related;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01617 evalue:7.8e-36 score:122.1 best_domain_score:121.8 name:TIGR01617;
57717 58367 CDS
ID metaerg.pl|00075
allgo_ids GO:0030674;
allko_ids K16511;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190751.1 1 215 evalue:2.0e-81 qcov:99.50 identity:76.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF05389;
pfam_desc Negative regulator of genetic competence (MecA);
pfam_id MecA;
pfam_target db:Pfam-A.hmm|PF05389.12 evalue:6.1e-44 score:149.6 best_domain_score:149.4 name:MecA;
sprot_desc Adapter protein MecA;
sprot_id sp|Q830U4|MECA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q830U4|MECA_ENTFA 1 215 evalue:1.4e-49 qcov:99.50 identity:52.10;
58471 59547 CDS
ID metaerg.pl|00076
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190749.1 1 353 evalue:2.4e-50 qcov:98.60 identity:34.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF06054;
pfam_desc Competence protein CoiA-like family;
pfam_id CoiA;
pfam_target db:Pfam-A.hmm|PF06054.11 evalue:1.8e-45 score:154.9 best_domain_score:153.5 name:CoiA;
59645 61459 CDS
ID metaerg.pl|00077
allec_ids 3.4.24.-;
allgo_ids GO:0004222; GO:0006508; GO:0046872;
allko_ids K08602;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000091.1_18 1 603 evalue:1.9e-286 qcov:99.80 identity:81.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01432; PF08439;
pfam_desc Peptidase family M3; Oligopeptidase F;
pfam_id Peptidase_M3; Peptidase_M3_N;
pfam_target db:Pfam-A.hmm|PF01432.20 evalue:1.3e-77 score:261.2 best_domain_score:261.2 name:Peptidase_M3; db:Pfam-A.hmm|PF08439.10 evalue:2.3e-22 score:78.3 best_domain_score:77.7 name:Peptidase_M3_N;
sprot_desc Oligoendopeptidase F homolog;
sprot_id sp|O31605|PEPF_BACSU;
sprot_target db:uniprot_sprot|sp|O31605|PEPF_BACSU 4 600 evalue:3.1e-190 qcov:98.80 identity:53.60;
tigrfam_acc TIGR00181;
tigrfam_desc oligoendopeptidase F;
tigrfam_mainrole Protein fate;
tigrfam_name pepF;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00181 evalue:9.7e-197 score:654.6 best_domain_score:654.4 name:TIGR00181;
62126 61503 CDS
ID metaerg.pl|00078
allgo_ids GO:0015035;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190743.1 1 207 evalue:4.7e-75 qcov:100.00 identity:69.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01323; PF13743;
pfam_desc DSBA-like thioredoxin domain; Thioredoxin;
pfam_id DSBA; Thioredoxin_5;
pfam_target db:Pfam-A.hmm|PF01323.20 evalue:6.1e-07 score:28.6 best_domain_score:28.3 name:DSBA; db:Pfam-A.hmm|PF13743.6 evalue:9.9e-51 score:171.3 best_domain_score:171.0 name:Thioredoxin_5;
sprot_desc hypothetical protein;
sprot_id sp|Q5L1S1|Y824_GEOKA;
sprot_target db:uniprot_sprot|sp|Q5L1S1|Y824_GEOKA 4 173 evalue:9.0e-09 qcov:82.10 identity:27.00;
62896 62312 CDS
ID metaerg.pl|00079
allec_ids 3.6.1.-;
allgo_ids GO:0016787;
allko_ids K01768;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190741.1 1 187 evalue:8.6e-47 qcov:96.40 identity:55.10;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id ALL-CHORISMATE-PWY; FOLSYN-PWY; PWY-6383; PWY-6147; PWY-6502; PWY-5354; PWY-6404;
metacyc_pathway_name superpathway of chorismate metabolism;; superpathway of tetrahydrofolate biosynthesis and salvage;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; oxidized GTP and dGTP detoxification;; ; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Super-Pathways;; Folate-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; 6-HM-Dihydropterin-PP-Biosynthesis;; Detoxification; Metabolic-Clusters;; ; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF01928;
pfam_desc CYTH domain;
pfam_id CYTH;
pfam_target db:Pfam-A.hmm|PF01928.21 evalue:2.8e-26 score:91.8 best_domain_score:91.6 name:CYTH;
sprot_desc Putative triphosphatase YjbK;
sprot_id sp|O31609|YJBK_BACSU;
sprot_target db:uniprot_sprot|sp|O31609|YJBK_BACSU 1 188 evalue:1.3e-22 qcov:96.90 identity:38.10;
63003 63626 CDS
ID metaerg.pl|00080
allec_ids 2.7.6.5;
allgo_ids GO:0015969; GO:0005524; GO:0005525; GO:0008728; GO:0016301; GO:0046872; GO:0015970;
allko_ids K00951; K07816;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034302524.1 1 206 evalue:3.4e-102 qcov:99.50 identity:90.80;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PPGPPMET-PWY;
metacyc_pathway_name ppGpp biosynthesis;;
metacyc_pathway_type Metabolic-Regulators;;
pfam_acc PF04607;
pfam_desc Region found in RelA / SpoT proteins;
pfam_id RelA_SpoT;
pfam_target db:Pfam-A.hmm|PF04607.17 evalue:9.8e-35 score:118.6 best_domain_score:118.0 name:RelA_SpoT;
sprot_desc GTP pyrophosphokinase YjbM;
sprot_id sp|O31611|YJBM_BACSU;
sprot_target db:uniprot_sprot|sp|O31611|YJBM_BACSU 2 205 evalue:2.9e-63 qcov:98.60 identity:59.80;
63644 64456 CDS
ID metaerg.pl|00081
allec_ids 2.7.1.23;
allgo_ids GO:0003951; GO:0006741; GO:0005737; GO:0005524; GO:0046872; GO:0019674;
allko_ids K00858;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264639.1 1 270 evalue:4.4e-126 qcov:100.00 identity:79.60;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id NADPHOS-DEPHOS-PWY; PWY-5083;
metacyc_pathway_name NAD phosphorylation and dephosphorylation;; NAD/NADH phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; NAD-Metabolism;;
pfam_acc PF01513;
pfam_desc ATP-NAD kinase;
pfam_id NAD_kinase;
pfam_target db:Pfam-A.hmm|PF01513.21 evalue:1.7e-26 score:92.3 best_domain_score:92.0 name:NAD_kinase;
sprot_desc NAD kinase;
sprot_id sp|Q03AS0|NADK_LACP3;
sprot_target db:uniprot_sprot|sp|Q03AS0|NADK_LACP3 1 265 evalue:1.7e-92 qcov:98.10 identity:58.10;
64446 65342 CDS
ID metaerg.pl|00082
allec_ids 5.4.99.-;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982;
allko_ids K06180;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190733.1 1 298 evalue:2.5e-106 qcov:100.00 identity:61.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6115; PWY-5377; PWY-6005; PWY-112; RIBOKIN-PWY; PWY-5203; PWY-6109; PWY-5992; PWY-5672; PWY-6008;
metacyc_pathway_name ; α-amyrin biosynthesis;; marneral biosynthesis;; lupeol biosynthesis;; ribose phosphorylation;; soybean saponin I biosynthesis;; mangrove triterpenoid biosynthesis;; thalianol and derivatives biosynthesis;; ginsenosides biosynthesis;; baruol biosynthesis;;
metacyc_pathway_type ; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; Sugars-And-Polysaccharides-Degradation;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;;
pfam_acc PF00849;
pfam_desc RNA pseudouridylate synthase;
pfam_id PseudoU_synth_2;
pfam_target db:Pfam-A.hmm|PF00849.22 evalue:1.4e-30 score:105.7 best_domain_score:105.1 name:PseudoU_synth_2;
sprot_desc Uncharacterized RNA pseudouridine synthase YjbO;
sprot_id sp|O31613|YJBO_BACSU;
sprot_target db:uniprot_sprot|sp|O31613|YJBO_BACSU 15 292 evalue:1.6e-59 qcov:93.30 identity:44.20;
tigrfam_acc TIGR00005;
tigrfam_desc pseudouridine synthase, RluA family;
tigrfam_mainrole Protein synthesis;
tigrfam_name rluA_subfam;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00005 evalue:1.6e-72 score:243.5 best_domain_score:243.3 name:TIGR00005;
65793 65350 CDS
ID metaerg.pl|00083
allec_ids 2.3.1.-;
allgo_ids GO:0004343; GO:0016747; GO:0006048;
allko_ids K09994; K00669; K03830; K06957;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034302518.1 1 144 evalue:1.4e-44 qcov:98.00 identity:64.60;
kegg_pathway_id 00380;
kegg_pathway_name Tryptophan metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5313; PWY-6316; CENTBENZCOA-PWY; PWY-6404; PWY-5987; PWY-6411; PWY-5268; PWY0-881; PWY-5140; THREOCAT-PWY; PWY-6438; PWY-84; PWY-5284; ECASYN-PWY; PWY-6515; P3-PWY; PWY-6295; PWY-5405; PWY-5972; PWY-5307; PWY-6318; PWY-6412; KDO-LIPASYN-PWY; PWY-5393; PWY-5965; PWY-5209; PWY-5400; PWY-6413; FASYN-INITIAL-PWY; PWYG-321; PWY-6113; LPSSYN-PWY; PWY-6432; PWY1A0-6325; PWY-5477; PWY-5981; PWY-5437; PWY-5080; PWY-6310; PWY-5139; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-4801; PWY-5184; BENZCOA-PWY; KDO-NAGLIPASYN-PWY; PWY1-3; PWY-6397; PWY-6418; PWY-6312; PWY-6442;
metacyc_pathway_name superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; aromatic polyketides biosynthesis;; benzoyl-CoA degradation II (anaerobic);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; sorgoleone biosynthesis;; ginsenoside degradation I;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; cannabinoid biosynthesis;; superpathway of L-threonine metabolism;; phenylphenalenone biosynthesis;; resveratrol biosynthesis;; shisonin biosynthesis;; enterobacterial common antigen biosynthesis;; phloridzin biosynthesis;; gallate degradation III (anaerobic);; ; superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; gentiodelphin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; raspberry ketone biosynthesis;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; amaranthin biosynthesis;; ginsenoside degradation III;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; curcuminoid biosynthesis;; actinorhodin biosynthesis;; gallotannin biosynthesis;; CDP-diacylglycerol biosynthesis III;; L-threonine degradation I;; very long chain fatty acid biosynthesis I;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; sophorolipid biosynthesis;; aloesone biosynthesis I;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; superpathway of (Kdo)2-lipid A biosynthesis;; polyhydroxybutanoate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;;
metacyc_pathway_type ANTHOCYANIN-SYN; Super-Pathways;; POLYKETIDE-SYN;; Benzoyl-CoA-Degradation;; Cell-Wall-Biosynthesis; Super-Pathways;; QUINONE-SYN;; Ginsenoside-Degradation;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Super-Pathways; THREONINE-DEG;; POLYKETIDE-SYN;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; ANTHOCYANIN-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; FLAVONOID-SYN;; GALLATE-DEG;; ; BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; ANTHOCYANIN-SYN;; PHENYLALANINE-DEG;; Ginsenoside-Degradation;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; Fatty-acid-biosynthesis;; METHANOGENESIS;; BETALAIN-ALKALOIDS;; TERPENOID-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; GALLOTANNINS;; CDP-diacylglycerol-Biosynthesis;; THREONINE-DEG;; Fatty-acid-biosynthesis;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Storage-Compounds-Biosynthesis;; Cell-Wall-Biosynthesis;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;;
pfam_acc PF00583; PF13673; PF13508;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.2e-13 score:50.6 best_domain_score:50.3 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:2.3e-22 score:78.5 best_domain_score:78.3 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:2.4e-12 score:46.3 best_domain_score:46.0 name:Acetyltransf_7;
sprot_desc Putative acetyltransferase SAR1027;
sprot_id sp|Q6GI30|ATSE_STAAR;
sprot_target db:uniprot_sprot|sp|Q6GI30|ATSE_STAAR 3 146 evalue:1.3e-22 qcov:98.00 identity:40.30;
65936 67054 CDS
ID metaerg.pl|00084
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482492.1 1 366 evalue:8.2e-163 qcov:98.40 identity:86.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:7.1e-69 score:231.7 best_domain_score:231.2 name:AI-2E_transport;
sprot_desc Putative transport protein YueF;
sprot_id sp|O32095|YUEF_BACSU;
sprot_target db:uniprot_sprot|sp|O32095|YUEF_BACSU 6 356 evalue:1.1e-54 qcov:94.40 identity:36.00;
tm_num 8;
65936 67054 transmembrane_helix
ID metaerg.pl|00085
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i65954-66022o66050-66118i66155-66223o66419-66487i66590-66658o66701-66769i66788-66856o66899-66967i;
67067 68653 CDS
ID metaerg.pl|00086
allgo_ids GO:0003924; GO:0005525; GO:0005737; GO:0016149; GO:0006449;
allko_ids K00956; K00860; K00955; K02837;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190824.1 3 528 evalue:1.7e-278 qcov:99.60 identity:90.70;
kegg_pathway_id 00450; 00920; 00230;
kegg_pathway_name Selenoamino acid metabolism; Sulfur metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF14492; PF00009; PF03144; PF01926; PF16658;
pfam_desc Elongation Factor G, domain II; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; 50S ribosome-binding GTPase; Class II release factor RF3, C-terminal domain;
pfam_id EFG_II; GTP_EFTU; GTP_EFTU_D2; MMR_HSR1; RF3_C;
pfam_target db:Pfam-A.hmm|PF14492.6 evalue:5.7e-07 score:28.8 best_domain_score:27.4 name:EFG_II; db:Pfam-A.hmm|PF00009.27 evalue:1e-52 score:177.8 best_domain_score:177.3 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:1.9e-08 score:33.8 best_domain_score:32.7 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF01926.23 evalue:6.4e-07 score:28.7 best_domain_score:27.4 name:MMR_HSR1; db:Pfam-A.hmm|PF16658.5 evalue:3e-43 score:146.0 best_domain_score:144.9 name:RF3_C;
sprot_desc Peptide chain release factor 3;
sprot_id sp|Q1WUZ8|RF3_LACS1;
sprot_target db:uniprot_sprot|sp|Q1WUZ8|RF3_LACS1 5 528 evalue:1.6e-227 qcov:99.20 identity:73.30;
tigrfam_acc TIGR00231; TIGR00503;
tigrfam_desc small GTP-binding protein domain; peptide chain release factor 3;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; prfC;
tigrfam_sub1role General; Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:5.9e-22 score:77.3 best_domain_score:76.4 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00503 evalue:2.8e-202 score:671.9 best_domain_score:671.6 name:TIGR00503;
70927 68714 CDS
ID metaerg.pl|00087
allgo_ids GO:0005524; GO:0046872;
allko_ids K03697;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482494.1 1 737 evalue:0.0e+00 qcov:100.00 identity:88.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00004; PF13173; PF13191; PF07724; PF13401; PF07728; PF12775; PF17871; PF10431; PF02562; PF00910; PF00158; PF05621; PF02151;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain; AAA ATPase domain; AAA domain (Cdc48 subfamily); AAA domain; AAA domain (dynein-related subfamily); P-loop containing dynein motor region; AAA lid domain; C-terminal, D2-small domain, of ClpB protein ; PhoH-like protein; RNA helicase; Sigma-54 interaction domain; Bacterial TniB protein; UvrB/uvrC motif;
pfam_id AAA; AAA_14; AAA_16; AAA_2; AAA_22; AAA_5; AAA_7; AAA_lid_9; ClpB_D2-small; PhoH; RNA_helicase; Sigma54_activat; TniB; UVR;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:7.4e-21 score:74.2 best_domain_score:42.3 name:AAA; db:Pfam-A.hmm|PF13173.6 evalue:5.3e-08 score:32.2 best_domain_score:17.0 name:AAA_14; db:Pfam-A.hmm|PF13191.6 evalue:3.8e-11 score:42.9 best_domain_score:26.0 name:AAA_16; db:Pfam-A.hmm|PF07724.14 evalue:4.6e-51 score:172.5 best_domain_score:161.1 name:AAA_2; db:Pfam-A.hmm|PF13401.6 evalue:1.6e-10 score:40.6 best_domain_score:19.8 name:AAA_22; db:Pfam-A.hmm|PF07728.14 evalue:2.6e-14 score:52.7 best_domain_score:36.9 name:AAA_5; db:Pfam-A.hmm|PF12775.7 evalue:5.1e-07 score:28.6 best_domain_score:16.3 name:AAA_7; db:Pfam-A.hmm|PF17871.1 evalue:1.4e-29 score:101.3 best_domain_score:101.3 name:AAA_lid_9; db:Pfam-A.hmm|PF10431.9 evalue:4.8e-24 score:83.5 best_domain_score:81.1 name:ClpB_D2-small; db:Pfam-A.hmm|PF02562.16 evalue:6.8e-05 score:21.6 best_domain_score:8.8 name:PhoH; db:Pfam-A.hmm|PF00910.22 evalue:2.8e-05 score:23.7 best_domain_score:12.5 name:RNA_helicase; db:Pfam-A.hmm|PF00158.26 evalue:1.8e-10 score:40.0 best_domain_score:25.7 name:Sigma54_activat; db:Pfam-A.hmm|PF05621.11 evalue:7.2e-08 score:31.3 best_domain_score:21.7 name:TniB; db:Pfam-A.hmm|PF02151.19 evalue:5.6e-06 score:25.2 best_domain_score:23.3 name:UVR;
sprot_desc ATP-dependent Clp protease ATP-binding subunit ClpE;
sprot_id sp|Q9S5Z2|CLPE_LACLM;
sprot_target db:uniprot_sprot|sp|Q9S5Z2|CLPE_LACLM 1 737 evalue:4.2e-266 qcov:100.00 identity:62.80;
71262 71528 CDS
ID metaerg.pl|00088
allgo_ids GO:0005737; GO:0009401;
allko_ids K02793; K05881; K02744; K11189; K02794; K02812; K02821;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482496.1 1 88 evalue:3.9e-39 qcov:100.00 identity:100.00;
kegg_pathway_id 02060;
kegg_pathway_name Phosphotransferase system (PTS);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00381;
pfam_desc PTS HPr component phosphorylation site;
pfam_id PTS-HPr;
pfam_target db:Pfam-A.hmm|PF00381.19 evalue:1.5e-30 score:104.5 best_domain_score:104.4 name:PTS-HPr;
sprot_desc Phosphocarrier protein HPr;
sprot_id sp|Q9KJV3|PTHP_LACCA;
sprot_target db:uniprot_sprot|sp|Q9KJV3|PTHP_LACCA 1 88 evalue:7.2e-32 qcov:100.00 identity:79.50;
tigrfam_acc TIGR01003;
tigrfam_desc phosphocarrier, HPr family;
tigrfam_mainrole Signal transduction;
tigrfam_name PTS_HPr_family;
tigrfam_sub1role PTS;
tigrfam_target db:TIGRFAMs.hmm|TIGR01003 evalue:7.3e-32 score:108.3 best_domain_score:108.2 name:TIGR01003;
71528 73252 CDS
ID metaerg.pl|00089
allec_ids 2.7.3.9;
allgo_ids GO:0009401; GO:0005737; GO:0016301; GO:0046872; GO:0008965;
allko_ids K08484; K02770; K02768; K02821; K02806; K02812; K08483; K00873; K01006; K02769; K02793; K11183; K05881; K01007; K02744; K11189; K11201; K02794;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190721.1 1 573 evalue:3.4e-285 qcov:99.80 identity:88.50;
kegg_pathway_id 00010; 00710; 02060; 00720; 00620; 00230;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Phosphotransferase system (PTS); Reductive carboxylate cycle (CO2 fixation); Pyruvate metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF05524; PF00391; PF02896;
pfam_desc PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain;
pfam_id PEP-utilisers_N; PEP-utilizers; PEP-utilizers_C;
pfam_target db:Pfam-A.hmm|PF05524.13 evalue:3.8e-32 score:110.1 best_domain_score:110.1 name:PEP-utilisers_N; db:Pfam-A.hmm|PF00391.23 evalue:3.8e-25 score:86.6 best_domain_score:84.9 name:PEP-utilizers; db:Pfam-A.hmm|PF02896.18 evalue:8.7e-128 score:424.8 best_domain_score:424.2 name:PEP-utilizers_C;
sprot_desc Phosphoenolpyruvate-protein phosphotransferase;
sprot_id sp|P23530|PT1_ENTFA;
sprot_target db:uniprot_sprot|sp|P23530|PT1_ENTFA 1 572 evalue:1.2e-233 qcov:99.70 identity:72.50;
tigrfam_acc TIGR01417;
tigrfam_desc phosphoenolpyruvate-protein phosphotransferase;
tigrfam_name PTS_I_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01417 evalue:2.5e-241 score:801.2 best_domain_score:801.0 name:TIGR01417;
73317 74183 CDS
ID metaerg.pl|00090
allec_ids 1.1.-.-;
allgo_ids GO:0051287; GO:0055114; GO:0050661; GO:0016491;
allko_ids K00286; K00020;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_C;s__Enterococcus_C massiliensis;
genomedb_acc GCF_001050095.1;
genomedb_target db:genomedb|GCF_001050095.1|WP_048603053.1 4 288 evalue:3.0e-112 qcov:99.00 identity:69.10;
kegg_pathway_id 00330; 00280;
kegg_pathway_name Arginine and proline metabolism; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id GAMMAHEXCHLORDEG-PWY;
metacyc_pathway_name γ-hexachlorocyclohexane degradation;;
metacyc_pathway_type CHLORINATED-COMPOUNDS-DEG;;
pfam_acc PF02826; PF03807; PF14833; PF03446; PF01488;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; NADP oxidoreductase coenzyme F420-dependent; NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase; NAD binding domain of 6-phosphogluconate dehydrogenase; Shikimate / quinate 5-dehydrogenase;
pfam_id 2-Hacid_dh_C; F420_oxidored; NAD_binding_11; NAD_binding_2; Shikimate_DH;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:2.7e-06 score:26.1 best_domain_score:25.5 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF03807.17 evalue:6.1e-13 score:48.4 best_domain_score:47.6 name:F420_oxidored; db:Pfam-A.hmm|PF14833.6 evalue:5.1e-33 score:113.2 best_domain_score:112.3 name:NAD_binding_11; db:Pfam-A.hmm|PF03446.15 evalue:2.7e-48 score:163.3 best_domain_score:162.6 name:NAD_binding_2; db:Pfam-A.hmm|PF01488.20 evalue:1.1e-08 score:34.5 best_domain_score:33.7 name:Shikimate_DH;
sprot_desc Uncharacterized oxidoreductase YkwC;
sprot_id sp|O34948|YKWC_BACSU;
sprot_target db:uniprot_sprot|sp|O34948|YKWC_BACSU 4 285 evalue:5.5e-81 qcov:97.90 identity:50.40;
75438 74266 CDS
ID metaerg.pl|00091
allec_ids 2.6.1.-;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0008483; GO:0019877; GO:0009089;
allko_ids K14155; K00812; K00825; K14264; K14287; K00837; K00841; K14267; K00818; K00842; K00816; K10907; K01760;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190716.1 7 387 evalue:8.5e-163 qcov:97.70 identity:75.30;
kegg_pathway_id 00380; 00400; 00401; 00271; 00350; 00300; 00330; 00220; 00450; 00272; 00710; 00310; 00920; 00360; 00252; 00251; 00910;
kegg_pathway_name Tryptophan metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Novobiocin biosynthesis; Methionine metabolism; Tyrosine metabolism; Lysine biosynthesis; Arginine and proline metabolism; Urea cycle and metabolism of amino groups; Selenoamino acid metabolism; Cysteine metabolism; Carbon fixation in photosynthetic organisms; Lysine degradation; Sulfur metabolism; Phenylalanine metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id ECASYN-PWY; PWY-6321; P621-PWY; PWYQT-4474; PWYQT-4475; PWY-6456; PWYQT-4471; PWY-5327; PWY-5826; PWYQT-4472; PWY-1186; LYSDEGII-PWY; PWY-6473; PWYQT-4473;
metacyc_pathway_name enterobacterial common antigen biosynthesis;; homotaurine degradation;; nylon-6 oligomer degradation;; glucosinolate biosynthesis from pentahomomethionine;; glucosinolate biosynthesis from hexahomomethionine;; serinol biosynthesis;; glucosinolate biosynthesis from dihomomethionine;; superpathway of L-lysine degradation;; hypoglycin biosynthesis;; glucosinolate biosynthesis from trihomomethionine;; L-homomethionine biosynthesis;; L-lysine degradation III;; 4-aminobutanoate degradation IV;; glucosinolate biosynthesis from tetrahomomethionine;;
metacyc_pathway_type Lipopolysaccharide-Biosynthesis; Super-Pathways;; Sulfur-Metabolism;; Other-Degradation;; GLUCOSINOLATE-SYN;; GLUCOSINOLATE-SYN;; Polyamine-Biosynthesis;; GLUCOSINOLATE-SYN;; LYSINE-DEG; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; Other-Amino-Acid-Biosynthesis;; LYSINE-DEG;; 4-Aminobutyraye-Degradation;; GLUCOSINOLATE-SYN;;
pfam_acc PF00155; PF01041;
pfam_desc Aminotransferase class I and II; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1.3e-64 score:217.9 best_domain_score:217.7 name:Aminotran_1_2; db:Pfam-A.hmm|PF01041.17 evalue:1.3e-08 score:33.8 best_domain_score:33.3 name:DegT_DnrJ_EryC1;
sprot_desc Probable N-acetyl-LL-diaminopimelate aminotransferase;
sprot_id sp|P16524|DAPX_BACSU;
sprot_target db:uniprot_sprot|sp|P16524|DAPX_BACSU 4 383 evalue:3.0e-90 qcov:97.40 identity:45.50;
tm_num 1;
75438 74266 transmembrane_helix
ID metaerg.pl|00092
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i75172-75240o;
75638 75889 CDS
ID metaerg.pl|00093
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000075.1_27 1 83 evalue:3.2e-35 qcov:100.00 identity:95.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF08796;
pfam_desc Protein of unknown function (DUF1797);
pfam_id DUF1797;
pfam_target db:Pfam-A.hmm|PF08796.10 evalue:4.1e-25 score:86.9 best_domain_score:86.7 name:DUF1797;
75980 76525 CDS
ID metaerg.pl|00094
allec_ids 3.1.3.-;
allgo_ids GO:0016791;
allko_ids K07015;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190710.1 1 178 evalue:1.6e-84 qcov:98.30 identity:85.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id NADPHOS-DEPHOS-PWY; PWY-6456; PWY-5491; PWY-882; PWY-5083;
metacyc_pathway_name NAD phosphorylation and dephosphorylation;; serinol biosynthesis;; diethylphosphate degradation;; L-ascorbate biosynthesis I (L-galactose pathway);; NAD/NADH phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; Polyamine-Biosynthesis;; Phosphorus-Compounds;; Ascorbate-Biosynthesis;; NAD-Metabolism;;
pfam_acc PF13419; PF00702; PF08282; PF13242; PF09419;
pfam_desc Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like; Mitochondrial PGP phosphatase;
pfam_id HAD_2; Hydrolase; Hydrolase_3; Hydrolase_like; PGP_phosphatase;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:1.1e-12 score:47.7 best_domain_score:44.3 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:8.3e-11 score:41.8 best_domain_score:39.0 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:1.4e-05 score:24.2 best_domain_score:20.7 name:Hydrolase_3; db:Pfam-A.hmm|PF13242.6 evalue:2.5e-12 score:45.9 best_domain_score:44.7 name:Hydrolase_like; db:Pfam-A.hmm|PF09419.10 evalue:2.4e-09 score:36.3 best_domain_score:21.1 name:PGP_phosphatase;
sprot_desc hypothetical protein;
sprot_id sp|P54452|YQEG_BACSU;
sprot_target db:uniprot_sprot|sp|P54452|YQEG_BACSU 5 170 evalue:3.4e-36 qcov:91.70 identity:44.00;
tigrfam_acc TIGR01549; TIGR01662; TIGR01668;
tigrfam_desc HAD hydrolase, family IA, variant 1; HAD hydrolase, family IIIA; HAD phosphatase, family IIIA;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name HAD-SF-IA-v1; HAD-SF-IIIA; YqeG_hyp_ppase;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01549 evalue:5.8e-09 score:35.7 best_domain_score:33.9 name:TIGR01549; db:TIGRFAMs.hmm|TIGR01662 evalue:2.1e-18 score:65.9 best_domain_score:64.8 name:TIGR01662; db:TIGRFAMs.hmm|TIGR01668 evalue:7.2e-44 score:148.5 best_domain_score:148.3 name:TIGR01668;
76503 77630 CDS
ID metaerg.pl|00095
allgo_ids GO:0005525; GO:0032297;
allko_ids K06948;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034302502.1 1 375 evalue:1.3e-163 qcov:100.00 identity:74.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02421; PF01926; PF00910; PF03193;
pfam_desc Ferrous iron transport protein B; 50S ribosome-binding GTPase; RNA helicase; RsgA GTPase;
pfam_id FeoB_N; MMR_HSR1; RNA_helicase; RsgA_GTPase;
pfam_target db:Pfam-A.hmm|PF02421.18 evalue:1.1e-06 score:27.5 best_domain_score:22.2 name:FeoB_N; db:Pfam-A.hmm|PF01926.23 evalue:3.1e-13 score:49.0 best_domain_score:47.1 name:MMR_HSR1; db:Pfam-A.hmm|PF00910.22 evalue:0.00013 score:21.6 best_domain_score:11.5 name:RNA_helicase; db:Pfam-A.hmm|PF03193.16 evalue:1.1e-09 score:37.6 best_domain_score:36.7 name:RsgA_GTPase;
sprot_desc hypothetical protein;
sprot_id sp|P54453|YQEH_BACSU;
sprot_target db:uniprot_sprot|sp|P54453|YQEH_BACSU 12 375 evalue:3.9e-111 qcov:97.10 identity:51.00;
tigrfam_acc TIGR03597;
tigrfam_desc ribosome biogenesis GTPase YqeH;
tigrfam_mainrole Protein synthesis;
tigrfam_name GTPase_YqeH;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR03597 evalue:6.5e-145 score:482.0 best_domain_score:481.8 name:TIGR03597;
77649 77963 CDS
ID metaerg.pl|00096
allgo_ids GO:0003723;
allko_ids K07574;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190706.1 1 104 evalue:1.5e-42 qcov:100.00 identity:89.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01985;
pfam_desc CRS1 / YhbY (CRM) domain;
pfam_id CRS1_YhbY;
pfam_target db:Pfam-A.hmm|PF01985.21 evalue:4.1e-18 score:64.6 best_domain_score:64.4 name:CRS1_YhbY;
sprot_desc RNA-binding protein HI_1333;
sprot_id sp|P71376|Y1333_HAEIN;
sprot_target db:uniprot_sprot|sp|P71376|Y1333_HAEIN 3 94 evalue:2.9e-08 qcov:88.50 identity:37.00;
tigrfam_acc TIGR00253;
tigrfam_desc putative RNA-binding protein, YhbY family;
tigrfam_mainrole Unknown function;
tigrfam_name RNA_bind_YhbY;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00253 evalue:4.3e-24 score:84.0 best_domain_score:83.8 name:TIGR00253;
77978 78619 CDS
ID metaerg.pl|00097
allec_ids 2.7.7.18;
allgo_ids GO:0003824; GO:0009058; GO:0005524; GO:0004515; GO:0009435;
allko_ids K00969;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190703.1 1 211 evalue:1.1e-76 qcov:99.10 identity:66.70;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5381; PYRIDNUCSYN-PWY; PWY-3502; NADSYN-PWY; PWY0-781; PWY-5653;
metacyc_pathway_name pyridine nucleotide cycling (plants);; NAD de novo biosynthesis I (from aspartate);; superpathway of NAD biosynthesis in eukaryotes;; NAD de novo biosynthesis II (from tryptophan);; aspartate superpathway;; NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde;;
metacyc_pathway_type NAD-Metabolism;; NAD-SYN;; NAD-SYN; Super-Pathways;; NAD-SYN; Super-Pathways;; Super-Pathways;; NAD-SYN;;
pfam_acc PF01467;
pfam_desc Cytidylyltransferase-like;
pfam_id CTP_transf_like;
pfam_target db:Pfam-A.hmm|PF01467.26 evalue:2.1e-36 score:124.5 best_domain_score:124.3 name:CTP_transf_like;
sprot_desc Probable nicotinate-nucleotide adenylyltransferase;
sprot_id sp|Q830B9|NADD_ENTFA;
sprot_target db:uniprot_sprot|sp|Q830B9|NADD_ENTFA 16 211 evalue:2.5e-54 qcov:92.00 identity:48.50;
tigrfam_acc TIGR00125; TIGR00482;
tigrfam_desc cytidyltransferase-like domain; nicotinate (nicotinamide) nucleotide adenylyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cyt_tran_rel; TIGR00482;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00125 evalue:2.1e-09 score:36.6 best_domain_score:35.9 name:TIGR00125; db:TIGRFAMs.hmm|TIGR00482 evalue:7.9e-56 score:188.3 best_domain_score:188.0 name:TIGR00482;
78609 79241 CDS
ID metaerg.pl|00098
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091479020.1 1 210 evalue:7.5e-81 qcov:100.00 identity:71.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01966;
pfam_desc HD domain;
pfam_id HD;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:4.4e-13 score:48.8 best_domain_score:48.0 name:HD;
sprot_desc hypothetical protein;
sprot_id sp|P54456|YQEK_BACSU;
sprot_target db:uniprot_sprot|sp|P54456|YQEK_BACSU 15 199 evalue:2.2e-39 qcov:88.10 identity:43.80;
tigrfam_acc TIGR00277; TIGR00488;
tigrfam_desc HDIG domain; putative HD superfamily hydrolase;
tigrfam_mainrole Unknown function;
tigrfam_name HDIG; TIGR00488;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00277 evalue:8.1e-07 score:28.0 best_domain_score:26.9 name:TIGR00277; db:TIGRFAMs.hmm|TIGR00488 evalue:5.3e-47 score:159.0 best_domain_score:158.8 name:TIGR00488;
79222 79581 CDS
ID metaerg.pl|00099
allgo_ids GO:0005737; GO:0043023; GO:0042256; GO:0090071; GO:0017148;
allko_ids K09710;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190698.1 1 118 evalue:2.1e-48 qcov:99.20 identity:82.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02410;
pfam_desc Ribosomal silencing factor during starvation;
pfam_id RsfS;
pfam_target db:Pfam-A.hmm|PF02410.15 evalue:2.1e-26 score:91.5 best_domain_score:91.3 name:RsfS;
sprot_desc Ribosomal silencing factor RsfS;
sprot_id sp|P54457|IOJAP_BACSU;
sprot_target db:uniprot_sprot|sp|P54457|IOJAP_BACSU 8 114 evalue:1.3e-28 qcov:89.90 identity:53.30;
tigrfam_acc TIGR00090;
tigrfam_desc ribosome silencing factor;
tigrfam_mainrole Protein synthesis;
tigrfam_name rsfS_iojap_ybeB;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00090 evalue:4.2e-34 score:115.8 best_domain_score:115.6 name:TIGR00090;
79581 80303 CDS
ID metaerg.pl|00100
allec_ids 2.1.1.-;
allgo_ids GO:0008168;
allko_ids K00568; K00599;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190696.1 1 240 evalue:2.8e-92 qcov:100.00 identity:67.50;
kegg_pathway_id 00350; 00130; 00380; 00150; 00340; 00626; 00450;
kegg_pathway_name Tyrosine metabolism; Ubiquinone biosynthesis; Tryptophan metabolism; Androgen and estrogen metabolism; Histidine metabolism; Naphthalene and anthracene degradation; Selenoamino acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5876; PWY-1061; PWY-5975; PWY-5864; PWY-5305; PWYG-321; PWY-6113; PWY-5729; PWY-1422; PWY-5467; PWY-6477; PWY-6575; PWY-6442; CODH-PWY; PWY-5041; PWY-4021; PWY-3542; ALL-CHORISMATE-PWY; PWY-6153; CO2FORM-PWY; PWY-5116; PWY-1581; METHIONINE-DEG1-PWY; PWY-5328; PWY-5773; PWY-6519; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6146; PWY-6427; PWY-6395; PWY-5479; PWY-5987; PWY-6292; PWY-5855; PWY-5209; PWY-6151; PWY-5857; PWY-6303; METH-ACETATE-PWY; PWY-5856; PWY-6142; PWY-6154; PWY-6424; UBISYN-PWY;
metacyc_pathway_name magnoflorine biosynthesis;; homogalacturonan biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; vitamin E biosynthesis (tocopherols);; gramine biosynthesis;; gibberellin inactivation II (methylation);; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; choline biosynthesis II;; superpathway of chorismate metabolism;; autoinducer AI-2 biosynthesis I;; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; xanthohumol biosynthesis;; biotin biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; methanogenesis from acetate;; ubiquinol-9 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; autoinducer AI-2 biosynthesis II (Vibrio);; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);;
metacyc_pathway_type ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Autotrophic-CO2-Fixation;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; Choline-Biosynthesis;; Super-Pathways;; Autoinducer-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; CYSTEINE-SYN; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Autoinducer-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;;
pfam_acc PF02353; PF08241; PF08242; PF10294; PF13489; PF13649; PF13847; PF05175; PF05401; PF03848; PF01209;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; Lysine methyltransferase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain; Nodulation protein S (NodS); Tellurite resistance protein TehB; ubiE/COQ5 methyltransferase family;
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_16; Methyltransf_23; Methyltransf_25; Methyltransf_31; MTS; NodS; TehB; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:9.3e-06 score:24.4 best_domain_score:23.7 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:1.8e-12 score:47.0 best_domain_score:46.1 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:4.5e-09 score:36.2 best_domain_score:35.6 name:Methyltransf_12; db:Pfam-A.hmm|PF10294.9 evalue:0.00011 score:21.2 best_domain_score:20.1 name:Methyltransf_16; db:Pfam-A.hmm|PF13489.6 evalue:6.5e-15 score:54.6 best_domain_score:53.9 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:3e-16 score:59.1 best_domain_score:58.3 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:6.4e-11 score:41.5 best_domain_score:41.2 name:Methyltransf_31; db:Pfam-A.hmm|PF05175.14 evalue:6.7e-06 score:25.0 best_domain_score:24.1 name:MTS; db:Pfam-A.hmm|PF05401.11 evalue:6.4e-07 score:28.4 best_domain_score:27.9 name:NodS; db:Pfam-A.hmm|PF03848.14 evalue:5.6e-06 score:25.1 best_domain_score:24.7 name:TehB; db:Pfam-A.hmm|PF01209.18 evalue:4.2e-07 score:28.8 best_domain_score:27.3 name:Ubie_methyltran;
sprot_desc Putative methyltransferase YqeM;
sprot_id sp|P54458|YQEM_BACSU;
sprot_target db:uniprot_sprot|sp|P54458|YQEM_BACSU 1 240 evalue:5.0e-43 qcov:100.00 identity:39.50;
80314 81507 CDS
ID metaerg.pl|00101
allec_ids 6.3.4.-;
allgo_ids GO:0008771; GO:0005737; GO:0005524; GO:0016879; GO:0000049; GO:0006400;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190693.1 1 396 evalue:7.9e-132 qcov:99.70 identity:57.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF08218; PF01467; PF05636;
pfam_desc Citrate lyase ligase C-terminal domain; Cytidylyltransferase-like; HIGH Nucleotidyl Transferase;
pfam_id Citrate_ly_lig; CTP_transf_like; HIGH_NTase1;
pfam_target db:Pfam-A.hmm|PF08218.11 evalue:4.4e-06 score:25.7 best_domain_score:12.0 name:Citrate_ly_lig; db:Pfam-A.hmm|PF01467.26 evalue:4.3e-09 score:35.9 best_domain_score:35.1 name:CTP_transf_like; db:Pfam-A.hmm|PF05636.11 evalue:1.7e-133 score:445.0 best_domain_score:444.8 name:HIGH_NTase1;
sprot_desc tRNA(Met) cytidine acetate ligase;
sprot_id sp|Q830C2|TMCAL_ENTFA;
sprot_target db:uniprot_sprot|sp|Q830C2|TMCAL_ENTFA 1 392 evalue:6.0e-86 qcov:98.70 identity:40.60;
81625 82191 CDS
ID metaerg.pl|00102
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190690.1 1 188 evalue:7.7e-61 qcov:100.00 identity:67.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02620;
pfam_desc Large ribosomal RNA subunit accumulation protein YceD;
pfam_id YceD;
pfam_target db:Pfam-A.hmm|PF02620.17 evalue:2.3e-19 score:68.9 best_domain_score:67.5 name:YceD;
82519 82893 CDS
ID metaerg.pl|00103
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264594.1 13 118 evalue:2.5e-23 qcov:85.50 identity:58.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF11877;
pfam_desc Protein of unknown function (DUF3397);
pfam_id DUF3397;
pfam_target db:Pfam-A.hmm|PF11877.8 evalue:3.6e-13 score:48.9 best_domain_score:48.6 name:DUF3397;
tm_num 4;
82519 82893 transmembrane_helix
ID metaerg.pl|00104
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o82546-82590i82624-82692o82705-82773i82810-82878o;
83078 83509 CDS
ID metaerg.pl|00105
allgo_ids GO:0005737; GO:0009295; GO:0003677; GO:0003700;
allko_ids K03925;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190683.1 1 143 evalue:1.7e-68 qcov:100.00 identity:88.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02381;
pfam_desc MraZ protein, putative antitoxin-like;
pfam_id MraZ;
pfam_target db:Pfam-A.hmm|PF02381.18 evalue:1e-48 score:162.4 best_domain_score:80.6 name:MraZ;
sprot_desc Transcriptional regulator MraZ;
sprot_id sp|O07103|MRAZ_ENTFA;
sprot_target db:uniprot_sprot|sp|O07103|MRAZ_ENTFA 1 143 evalue:6.6e-59 qcov:100.00 identity:69.90;
tigrfam_acc TIGR00242;
tigrfam_desc division/cell wall cluster transcriptional repressor MraZ;
tigrfam_mainrole Regulatory functions;
tigrfam_name TIGR00242;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00242 evalue:3e-51 score:172.3 best_domain_score:172.1 name:TIGR00242;
83525 84475 CDS
ID metaerg.pl|00106
allec_ids 2.1.1.199;
allgo_ids GO:0008168; GO:0005737; GO:0071424; GO:0070475;
allko_ids K03438;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091479009.1 1 316 evalue:2.2e-145 qcov:100.00 identity:80.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01795;
pfam_desc MraW methylase family;
pfam_id Methyltransf_5;
pfam_target db:Pfam-A.hmm|PF01795.19 evalue:7e-132 score:438.8 best_domain_score:438.6 name:Methyltransf_5;
sprot_desc Ribosomal RNA small subunit methyltransferase H;
sprot_id sp|B1HPY0|RSMH_LYSSC;
sprot_target db:uniprot_sprot|sp|B1HPY0|RSMH_LYSSC 4 313 evalue:1.6e-121 qcov:98.10 identity:70.00;
tigrfam_acc TIGR00006;
tigrfam_desc 16S rRNA (cytosine(1402)-N(4))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00006;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00006 evalue:2.2e-124 score:414.1 best_domain_score:413.9 name:TIGR00006;
84508 84888 CDS
ID metaerg.pl|00107
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190678.1 1 126 evalue:6.2e-38 qcov:100.00 identity:70.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
tigrfam_acc TIGR02209;
tigrfam_desc cell division protein FtsL;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsL_broad;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR02209 evalue:3.7e-12 score:45.1 best_domain_score:44.7 name:TIGR02209;
tm_num 1;
84508 84888 transmembrane_helix
ID metaerg.pl|00108
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i84643-84711o;
84885 87065 CDS
ID metaerg.pl|00109
allgo_ids GO:0008658; GO:0005887; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360; GO:0046677; GO:0030435;
allko_ids K08384; K05364; K12556; K03587; K08282; K08884; K08724;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190675.1 1 724 evalue:0.0e+00 qcov:99.70 identity:73.50;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF03793; PF03717; PF00905;
pfam_desc PASTA domain; Penicillin-binding Protein dimerisation domain; Penicillin binding protein transpeptidase domain;
pfam_id PASTA; PBP_dimer; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF03793.19 evalue:1.7e-06 score:27.0 best_domain_score:18.0 name:PASTA; db:Pfam-A.hmm|PF03717.15 evalue:1.6e-26 score:93.0 best_domain_score:92.0 name:PBP_dimer; db:Pfam-A.hmm|PF00905.22 evalue:9.4e-73 score:244.3 best_domain_score:243.8 name:Transpeptidase;
sprot_desc Penicillin-binding protein 2B;
sprot_id sp|Q07868|PBPB_BACSU;
sprot_target db:uniprot_sprot|sp|Q07868|PBPB_BACSU 41 723 evalue:3.3e-122 qcov:94.10 identity:35.40;
tm_num 1;
84885 87065 transmembrane_helix
ID metaerg.pl|00110
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i84942-85010o;
87084 88046 CDS
ID metaerg.pl|00111
allec_ids 2.7.8.13;
allgo_ids GO:0008963; GO:0016021; GO:0005886; GO:0051992; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01000;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190673.1 1 320 evalue:1.4e-131 qcov:100.00 identity:77.20;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6470; PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00953; PF10555;
pfam_desc Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1;
pfam_id Glycos_transf_4; MraY_sig1;
pfam_target db:Pfam-A.hmm|PF00953.21 evalue:1.5e-35 score:121.8 best_domain_score:121.8 name:Glycos_transf_4; db:Pfam-A.hmm|PF10555.9 evalue:3.2e-05 score:22.5 best_domain_score:20.8 name:MraY_sig1;
sprot_desc Phospho-N-acetylmuramoyl-pentapeptide-transferase;
sprot_id sp|O07107|MRAY_ENTFA;
sprot_target db:uniprot_sprot|sp|O07107|MRAY_ENTFA 1 320 evalue:1.6e-89 qcov:100.00 identity:54.10;
tigrfam_acc TIGR00445;
tigrfam_desc phospho-N-acetylmuramoyl-pentapeptide-transferase;
tigrfam_mainrole Cell envelope;
tigrfam_name mraY;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00445 evalue:4.5e-91 score:304.8 best_domain_score:304.0 name:TIGR00445;
tm_num 10;
87084 88046 transmembrane_helix
ID metaerg.pl|00112
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o87096-87164i87246-87305o87315-87374i87435-87503o87531-87584i87603-87671o87681-87740i87759-87827o87837-87905i87966-88034o;
88138 89523 CDS
ID metaerg.pl|00113
allec_ids 6.3.2.9;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0008764; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01924; K01929; K01925; K01928;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190672.1 7 461 evalue:9.1e-172 qcov:98.70 identity:67.00;
kegg_pathway_id 00550; 00300; 00471;
kegg_pathway_name Peptidoglycan biosynthesis; Lysine biosynthesis; D-Glutamine and D-glutamate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6471; PWY-6386; PEPTIDOGLYCANSYN-PWY; PWY-6470; PWY-6385; PWY-5265; PWY-6387;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;;
pfam_acc PF01225; PF02875; PF08245;
pfam_desc Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase; Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF01225.25 evalue:7.3e-05 score:22.3 best_domain_score:19.0 name:Mur_ligase; db:Pfam-A.hmm|PF02875.21 evalue:2.9e-08 score:33.1 best_domain_score:30.8 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:4.9e-37 score:127.0 best_domain_score:127.0 name:Mur_ligase_M;
sp YES;
sprot_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
sprot_id sp|O07108|MURD_ENTFA;
sprot_target db:uniprot_sprot|sp|O07108|MURD_ENTFA 1 456 evalue:1.0e-129 qcov:98.90 identity:53.40;
tigrfam_acc TIGR01087;
tigrfam_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murD;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01087 evalue:7.3e-129 score:429.8 best_domain_score:429.6 name:TIGR01087;
tm_num 1;
88138 88233 signal_peptide
ID metaerg.pl|00114
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
88138 89523 transmembrane_helix
ID metaerg.pl|00115
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i88174-88242o;
89542 90663 CDS
ID metaerg.pl|00116
allec_ids 2.4.1.227;
allgo_ids GO:0005975; GO:0016758; GO:0030259; GO:0005886; GO:0051991; GO:0050511; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K07432; K07441; K03429; K02563;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190670.1 1 373 evalue:5.3e-146 qcov:100.00 identity:69.70;
kegg_pathway_id 01030; 00510; 00561; 00550;
kegg_pathway_name Glycan structures - biosynthesis 1; N-Glycan biosynthesis; Glycerolipid metabolism; Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6385; PWY-5265; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6470;
metacyc_pathway_name peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF03033; PF04101; PF00201;
pfam_desc Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; UDP-glucoronosyl and UDP-glucosyl transferase;
pfam_id Glyco_transf_28; Glyco_tran_28_C; UDPGT;
pfam_target db:Pfam-A.hmm|PF03033.20 evalue:2e-42 score:143.8 best_domain_score:143.4 name:Glyco_transf_28; db:Pfam-A.hmm|PF04101.16 evalue:1.3e-36 score:125.4 best_domain_score:123.4 name:Glyco_tran_28_C; db:Pfam-A.hmm|PF00201.18 evalue:0.00011 score:20.4 best_domain_score:18.9 name:UDPGT;
sprot_desc UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;
sprot_id sp|A8FCY1|MURG_BACP2;
sprot_target db:uniprot_sprot|sp|A8FCY1|MURG_BACP2 1 373 evalue:6.0e-104 qcov:100.00 identity:50.10;
tigrfam_acc TIGR01133;
tigrfam_desc undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;
tigrfam_mainrole Cell envelope;
tigrfam_name murG;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01133 evalue:2.8e-95 score:318.5 best_domain_score:318.3 name:TIGR01133;
90685 91542 CDS
ID metaerg.pl|00117
allgo_ids GO:0032153; GO:0005887; GO:0043093;
allko_ids K03589;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264574.1 1 281 evalue:2.4e-69 qcov:98.60 identity:55.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF03799; PF08478;
pfam_desc Cell division protein FtsQ; POTRA domain, FtsQ-type;
pfam_id FtsQ; POTRA_1;
pfam_target db:Pfam-A.hmm|PF03799.15 evalue:2.2e-05 score:24.5 best_domain_score:23.6 name:FtsQ; db:Pfam-A.hmm|PF08478.10 evalue:4.8e-05 score:22.8 best_domain_score:21.9 name:POTRA_1;
sprot_desc Cell division protein DivIB;
sprot_id sp|F0PBT2|DIVIB_ENTF6;
sprot_target db:uniprot_sprot|sp|F0PBT2|DIVIB_ENTF6 31 281 evalue:1.1e-25 qcov:88.10 identity:27.50;
tm_num 1;
90685 91542 transmembrane_helix
ID metaerg.pl|00118
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i90784-90852o;
91770 93083 CDS
ID metaerg.pl|00119
allgo_ids GO:0000902; GO:0032153; GO:0009898; GO:0043093;
allko_ids K03590;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264571.1 1 437 evalue:8.1e-178 qcov:100.00 identity:74.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF11983; PF14450; PF06723; PF11104; PF02491;
pfam_desc Membrane-attachment and polymerisation-promoting switch; Cell division protein FtsA; MreB/Mbl protein; Type IV pilus assembly protein PilM;; SHS2 domain inserted in FTSA;
pfam_id DUF3484; FtsA; MreB_Mbl; PilM_2; SHS2_FTSA;
pfam_target db:Pfam-A.hmm|PF11983.8 evalue:4.4e-07 score:30.2 best_domain_score:28.9 name:DUF3484; db:Pfam-A.hmm|PF14450.6 evalue:3.2e-26 score:91.0 best_domain_score:61.6 name:FtsA; db:Pfam-A.hmm|PF06723.13 evalue:8e-15 score:53.7 best_domain_score:48.6 name:MreB_Mbl; db:Pfam-A.hmm|PF11104.8 evalue:6.3e-07 score:28.0 best_domain_score:15.6 name:PilM_2; db:Pfam-A.hmm|PF02491.20 evalue:1e-12 score:47.5 best_domain_score:46.8 name:SHS2_FTSA;
sprot_desc Cell division protein FtsA;
sprot_id sp|O07111|FTSA_ENTFA;
sprot_target db:uniprot_sprot|sp|O07111|FTSA_ENTFA 2 437 evalue:3.5e-103 qcov:99.80 identity:44.50;
tigrfam_acc TIGR01174;
tigrfam_desc cell division protein FtsA;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsA;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR01174 evalue:1.1e-84 score:283.8 best_domain_score:283.6 name:TIGR01174;
93113 94327 CDS
ID metaerg.pl|00120
allgo_ids GO:0003924; GO:0032153; GO:0005737; GO:0005525; GO:0000917; GO:0043093; GO:0051258;
allko_ids K03531;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190663.1 1 404 evalue:6.9e-192 qcov:100.00 identity:89.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF12327; PF00091;
pfam_desc FtsZ family, C-terminal domain; Tubulin/FtsZ family, GTPase domain;
pfam_id FtsZ_C; Tubulin;
pfam_target db:Pfam-A.hmm|PF12327.8 evalue:8.3e-33 score:111.8 best_domain_score:110.1 name:FtsZ_C; db:Pfam-A.hmm|PF00091.25 evalue:1.5e-39 score:135.5 best_domain_score:134.5 name:Tubulin;
sprot_desc Cell division protein FtsZ;
sprot_id sp|O08439|FTSZ_ENTFA;
sprot_target db:uniprot_sprot|sp|O08439|FTSZ_ENTFA 1 403 evalue:1.4e-146 qcov:99.80 identity:67.90;
tigrfam_acc TIGR00065;
tigrfam_desc cell division protein FtsZ;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsZ;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR00065 evalue:7.2e-129 score:429.3 best_domain_score:428.8 name:TIGR00065;
94349 94819 CDS
ID metaerg.pl|00121
allgo_ids GO:0090529; GO:0005737; GO:0000917; GO:0043093;
allko_ids K09772;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190660.1 2 156 evalue:1.3e-58 qcov:99.40 identity:76.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF04472;
pfam_desc Cell division protein SepF;
pfam_id SepF;
pfam_target db:Pfam-A.hmm|PF04472.12 evalue:5.3e-26 score:89.9 best_domain_score:89.4 name:SepF;
sprot_desc Cell division protein SepF;
sprot_id sp|Q65JW1|SEPF_BACLD;
sprot_target db:uniprot_sprot|sp|Q65JW1|SEPF_BACLD 2 145 evalue:2.0e-21 qcov:92.30 identity:36.80;
94845 95144 CDS
ID metaerg.pl|00122
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478992.1 1 99 evalue:4.8e-38 qcov:100.00 identity:84.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02325;
pfam_desc YGGT family;
pfam_id YGGT;
pfam_target db:Pfam-A.hmm|PF02325.17 evalue:4.6e-17 score:61.4 best_domain_score:61.4 name:YGGT;
tm_num 2;
94845 95144 transmembrane_helix
ID metaerg.pl|00123
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i94902-94970o95028-95096i;
95152 95937 CDS
ID metaerg.pl|00124
allgo_ids GO:0003723;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478990.1 1 260 evalue:2.5e-118 qcov:99.60 identity:77.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01479; PF17774;
pfam_desc S4 domain; Putative RNA-binding domain in YlmH;
pfam_id S4; YlmH_RBD;
pfam_target db:Pfam-A.hmm|PF01479.25 evalue:3.4e-07 score:29.1 best_domain_score:27.7 name:S4; db:Pfam-A.hmm|PF17774.1 evalue:7.7e-34 score:115.1 best_domain_score:114.0 name:YlmH_RBD;
sprot_desc Putative RNA-binding protein YlmH;
sprot_id sp|P71020|YLMH_BACSU;
sprot_target db:uniprot_sprot|sp|P71020|YLMH_BACSU 1 253 evalue:6.2e-55 qcov:96.90 identity:43.50;
96015 96701 CDS
ID metaerg.pl|00125
allgo_ids GO:0005737; GO:0042802; GO:0000917; GO:0030435;
allko_ids K04074;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091489097.1 1 225 evalue:1.5e-90 qcov:98.70 identity:84.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF05103;
pfam_desc DivIVA protein;
pfam_id DivIVA;
pfam_target db:Pfam-A.hmm|PF05103.13 evalue:3.6e-41 score:139.5 best_domain_score:139.5 name:DivIVA;
sprot_desc Septum site-determining protein DivIVA;
sprot_id sp|P71021|DIV4A_BACSU;
sprot_target db:uniprot_sprot|sp|P71021|DIV4A_BACSU 1 164 evalue:5.4e-23 qcov:71.90 identity:52.40;
tigrfam_acc TIGR03544;
tigrfam_desc DivIVA domain;
tigrfam_name DivI1A_domain;
tigrfam_target db:TIGRFAMs.hmm|TIGR03544 evalue:1.3e-17 score:62.3 best_domain_score:61.4 name:TIGR03544;
96959 99733 CDS
ID metaerg.pl|00126
allec_ids 6.1.1.5;
allgo_ids GO:0004812; GO:0006418; GO:0005737; GO:0002161; GO:0005524; GO:0004822; GO:0000049; GO:0008270; GO:0006428;
allko_ids K01870;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190651.1 1 924 evalue:0.0e+00 qcov:100.00 identity:85.10;
kegg_pathway_id 00290; 00970;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF08264; PF00133; PF01406; PF09334; PF13603;
pfam_desc Anticodon-binding domain of tRNA; tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (C) catalytic domain; tRNA synthetases class I (M); Leucyl-tRNA synthetase, Domain 2;
pfam_id Anticodon_1; tRNA-synt_1; tRNA-synt_1e; tRNA-synt_1g; tRNA-synt_1_2;
pfam_target db:Pfam-A.hmm|PF08264.13 evalue:1.5e-28 score:98.9 best_domain_score:98.8 name:Anticodon_1; db:Pfam-A.hmm|PF00133.22 evalue:3e-216 score:718.6 best_domain_score:718.6 name:tRNA-synt_1; db:Pfam-A.hmm|PF01406.19 evalue:2e-09 score:36.5 best_domain_score:18.7 name:tRNA-synt_1e; db:Pfam-A.hmm|PF09334.11 evalue:6.1e-27 score:93.6 best_domain_score:61.2 name:tRNA-synt_1g; db:Pfam-A.hmm|PF13603.6 evalue:8.5e-08 score:31.1 best_domain_score:30.0 name:tRNA-synt_1_2;
sprot_desc Isoleucine--tRNA ligase;
sprot_id sp|Q836V1|SYI_ENTFA;
sprot_target db:uniprot_sprot|sp|Q836V1|SYI_ENTFA 1 924 evalue:0.0e+00 qcov:100.00 identity:66.10;
tigrfam_acc TIGR00392;
tigrfam_desc isoleucine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name ileS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00392 evalue:1.9e-296 score:984.9 best_domain_score:984.7 name:TIGR00392;
99926 100126 CDS
ID metaerg.pl|00127
allgo_ids GO:0003676; GO:0005737;
allko_ids K03704;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190649.1 1 66 evalue:9.8e-27 qcov:100.00 identity:86.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00313;
pfam_desc 'Cold-shock' DNA-binding domain;
pfam_id CSD;
pfam_target db:Pfam-A.hmm|PF00313.22 evalue:5.8e-31 score:105.4 best_domain_score:105.3 name:CSD;
sprot_desc Cold shock protein CspA;
sprot_id sp|Q5HPE0|CSPA_STAEQ;
sprot_target db:uniprot_sprot|sp|Q5HPE0|CSPA_STAEQ 1 66 evalue:1.3e-25 qcov:100.00 identity:78.80;
100422 100180 CDS
ID metaerg.pl|00128
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264552.1 1 80 evalue:1.4e-32 qcov:100.00 identity:91.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF04226;
pfam_desc Transglycosylase associated protein;
pfam_id Transgly_assoc;
pfam_target db:Pfam-A.hmm|PF04226.13 evalue:5.5e-09 score:35.4 best_domain_score:35.4 name:Transgly_assoc;
sprot_desc hypothetical protein;
sprot_id sp|O32282|YWZA_BACSU;
sprot_target db:uniprot_sprot|sp|O32282|YWZA_BACSU 2 76 evalue:6.8e-13 qcov:93.80 identity:51.30;
tm_num 3;
100422 100180 transmembrane_helix
ID metaerg.pl|00129
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i100183-100242o100255-100323i100342-100410o;
101725 100520 CDS
ID metaerg.pl|00130
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478984.1 1 397 evalue:1.9e-178 qcov:99.00 identity:85.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF05816;
pfam_desc Toxic anion resistance protein (TelA);
pfam_id TelA;
pfam_target db:Pfam-A.hmm|PF05816.11 evalue:1.2e-118 score:395.3 best_domain_score:395.0 name:TelA;
sprot_desc hypothetical protein;
sprot_id sp|Q92A41|Y2081_LISIN;
sprot_target db:uniprot_sprot|sp|Q92A41|Y2081_LISIN 17 392 evalue:1.5e-113 qcov:93.80 identity:57.20;
102432 101752 CDS
ID metaerg.pl|00131
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478983.1 1 220 evalue:1.6e-73 qcov:97.30 identity:67.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF10112;
pfam_desc 5-bromo-4-chloroindolyl phosphate hydrolysis protein;
pfam_id Halogen_Hydrol;
pfam_target db:Pfam-A.hmm|PF10112.9 evalue:3.2e-45 score:153.7 best_domain_score:153.5 name:Halogen_Hydrol;
tm_num 2;
102432 101752 transmembrane_helix
ID metaerg.pl|00132
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i101770-101838o101851-101910i;
102604 103161 CDS
ID metaerg.pl|00133
allec_ids 3.-.-.-;
allgo_ids GO:0016787; GO:0016818; GO:0000287;
allko_ids K01515;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190639.1 1 179 evalue:1.1e-70 qcov:96.80 identity:73.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:3.5e-13 score:49.0 best_domain_score:48.5 name:NUDIX;
sprot_desc Methanol dehydrogenase activator;
sprot_id sp|Q8KP10|ACT_BACMT;
sprot_target db:uniprot_sprot|sp|Q8KP10|ACT_BACMT 3 184 evalue:4.8e-38 qcov:98.40 identity:47.80;
103176 103421 CDS
ID metaerg.pl|00134
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478979.1 1 81 evalue:3.0e-09 qcov:100.00 identity:59.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
tm_num 1;
103176 103421 transmembrane_helix
ID metaerg.pl|00135
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i103353-103412o;
103446 104153 CDS
ID metaerg.pl|00136
allec_ids 3.2.2.9; 3.2.2.16 3.2.2.9;
allgo_ids GO:0003824; GO:0009116; GO:0008782; GO:0008930; GO:0019509; GO:0019284; GO:0009164;
allko_ids K01243;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264539.1 1 228 evalue:2.2e-89 qcov:97.00 identity:75.90;
kegg_pathway_id 00271;
kegg_pathway_name Methionine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6151; PWY-6153; PWY-6154;
metacyc_pathway_name S-adenosyl-L-methionine cycle I;; autoinducer AI-2 biosynthesis I;; autoinducer AI-2 biosynthesis II (Vibrio);;
metacyc_pathway_type S-adenosyl-L-methionine-cycle; Super-Pathways;; Autoinducer-Biosynthesis;; Autoinducer-Biosynthesis;;
pfam_acc PF01048;
pfam_desc Phosphorylase superfamily;
pfam_id PNP_UDP_1;
pfam_target db:Pfam-A.hmm|PF01048.20 evalue:8.5e-49 score:165.1 best_domain_score:165.0 name:PNP_UDP_1;
sprot_desc 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;
sprot_id sp|C4L559|MTNN_EXISA;
sprot_target db:uniprot_sprot|sp|C4L559|MTNN_EXISA 1 223 evalue:1.7e-59 qcov:94.90 identity:52.70;
tigrfam_acc TIGR01704;
tigrfam_desc MTA/SAH nucleosidase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name MTA/SAH-Nsdase;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01704 evalue:4.1e-78 score:261.2 best_domain_score:260.9 name:TIGR01704;
104396 105373 CDS
ID metaerg.pl|00137
allgo_ids GO:0005215; GO:0016020; GO:0005887; GO:0022857; GO:0033214;
allko_ids K02015;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000101.1_4 1 324 evalue:8.2e-127 qcov:99.70 identity:76.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01032;
pfam_desc FecCD transport family;
pfam_id FecCD;
pfam_target db:Pfam-A.hmm|PF01032.18 evalue:2.7e-64 score:216.4 best_domain_score:216.1 name:FecCD;
sprot_desc Petrobactin import system permease protein YclN;
sprot_id sp|P94418|YCLN_BACSU;
sprot_target db:uniprot_sprot|sp|P94418|YCLN_BACSU 15 321 evalue:4.5e-71 qcov:94.50 identity:45.90;
tm_num 10;
104396 105373 transmembrane_helix
ID metaerg.pl|00138
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i104432-104500o104558-104626i104645-104713o104741-104797i104834-104902o104960-105028i105047-105106o105119-105187i105212-105268o105296-105355i;
105370 106326 CDS
ID metaerg.pl|00139
allgo_ids GO:0005215; GO:0016020; GO:0005887; GO:0022857; GO:0033214;
allko_ids K02015;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478977.1 1 317 evalue:9.2e-131 qcov:99.70 identity:77.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01032;
pfam_desc FecCD transport family;
pfam_id FecCD;
pfam_target db:Pfam-A.hmm|PF01032.18 evalue:3.1e-46 score:157.0 best_domain_score:156.6 name:FecCD;
sprot_desc Petrobactin import system permease protein YclO;
sprot_id sp|P94419|YCLO_BACSU;
sprot_target db:uniprot_sprot|sp|P94419|YCLO_BACSU 15 315 evalue:3.3e-50 qcov:94.70 identity:38.50;
tm_num 8;
105370 106326 transmembrane_helix
ID metaerg.pl|00140
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i105388-105456o105499-105552i105571-105636o105679-105747i105766-105834o106054-106122i106159-106227o106255-106308i;
106329 107090 CDS
ID metaerg.pl|00141
allec_ids 7.2.2.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0006811; GO:0055072;
allko_ids K09817; K02010; K05847; K02052; K02006; K02017; K06861; K02071; K01996; K02045; K11072; K02049; K01995; K10111; K02013; K05816; K01990; K02023; K02000;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478975.1 1 253 evalue:3.2e-126 qcov:100.00 identity:89.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.8e-07 score:29.5 best_domain_score:16.4 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:5.6e-31 score:107.1 best_domain_score:106.7 name:ABC_tran;
sprot_desc Petrobactin import ATP-binding protein YclP;
sprot_id sp|P94420|YCLP_BACSU;
sprot_target db:uniprot_sprot|sp|P94420|YCLP_BACSU 1 251 evalue:2.3e-75 qcov:99.20 identity:53.40;
107112 108107 CDS
ID metaerg.pl|00142
allgo_ids GO:0030288; GO:0005886; GO:0055072; GO:0006826;
allko_ids K02016;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000081.1_6 1 331 evalue:8.4e-127 qcov:100.00 identity:70.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01497;
pfam_desc Periplasmic binding protein;
pfam_id Peripla_BP_2;
pfam_target db:Pfam-A.hmm|PF01497.18 evalue:6.8e-26 score:90.5 best_domain_score:90.2 name:Peripla_BP_2;
sp YES;
sprot_desc Petrobactin-binding protein YclQ;
sprot_id sp|P94421|YCLQ_BACSU;
sprot_target db:uniprot_sprot|sp|P94421|YCLQ_BACSU 3 330 evalue:7.1e-48 qcov:99.10 identity:34.20;
107112 107171 lipoprotein_signal_peptide
ID metaerg.pl|00143
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
108271 108825 CDS
ID metaerg.pl|00144
allec_ids 2.3.1.-;
allgo_ids GO:0016407;
allko_ids K02536; K04042; K00640; K00677;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000081.1_8 1 184 evalue:1.3e-76 qcov:100.00 identity:75.00;
kegg_pathway_id 00272; 00530; 00540; 00920;
kegg_pathway_name Cysteine metabolism; Aminosugars metabolism; Lipopolysaccharide biosynthesis; Sulfur metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5080; PWY-6310; PWY-5139; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-4801; PWY-5184; BENZCOA-PWY; KDO-NAGLIPASYN-PWY; PWY1-3; PWY-6397; PWY-6312; PWY-6418; PWY-6442; PWY-6413; PWYG-321; FASYN-INITIAL-PWY; PWY-6113; LPSSYN-PWY; PWY-6432; PWY1A0-6325; PWY-5477; PWY-5437; PWY-5981; PWY-5972; PWY-5405; PWY-5307; PWY-6318; PWY-6412; PWY-5393; KDO-LIPASYN-PWY; PWY-5965; PWY-5209; PWY-5400; PWY-5313; CENTBENZCOA-PWY; PWY-6316; PWY-6404; PWY-6411; PWY-5987; PWY-5268; PWY0-881; PWY-5140; PWY-6438; THREOCAT-PWY; PWY-84; PWY-5284; ECASYN-PWY; P3-PWY; PWY-6515; PWY-6295;
metacyc_pathway_name very long chain fatty acid biosynthesis I;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; sophorolipid biosynthesis;; aloesone biosynthesis I;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; superpathway of (Kdo)2-lipid A biosynthesis;; polyhydroxybutanoate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; barbaloin biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; ginsenoside degradation III;; mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; superpathway of mycolate biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; curcuminoid biosynthesis;; actinorhodin biosynthesis;; gallotannin biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; stearate biosynthesis I (animals and fungi);; superpathway of betalain biosynthesis;; gentiodelphin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; ginsenoside degradation II;; raspberry ketone biosynthesis;; (Kdo)2-lipid A biosynthesis I;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; amaranthin biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ginsenoside degradation I;; sorgoleone biosynthesis;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; cannabinoid biosynthesis;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; resveratrol biosynthesis;; shisonin biosynthesis;; enterobacterial common antigen biosynthesis;; gallate degradation III (anaerobic);; phloridzin biosynthesis;; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Storage-Compounds-Biosynthesis;; Cell-Wall-Biosynthesis;; POLYKETIDE-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; TERPENOID-DEG;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; GALLOTANNINS;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; Stearate-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; ANTHOCYANIN-SYN;; PHENYLALANINE-DEG;; Ginsenoside-Degradation;; POLYKETIDE-SYN;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis;; METHANOGENESIS;; BETALAIN-ALKALOIDS;; ANTHOCYANIN-SYN; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Ginsenoside-Degradation;; QUINONE-SYN;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; ANTHOCYANIN-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; GALLATE-DEG;; FLAVONOID-SYN;; ;
pfam_acc PF00132; PF14602; PF12464;
pfam_desc Bacterial transferase hexapeptide (six repeats); Hexapeptide repeat of succinyl-transferase; Maltose acetyltransferase;
pfam_id Hexapep; Hexapep_2; Mac;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:4.3e-12 score:44.5 best_domain_score:41.9 name:Hexapep; db:Pfam-A.hmm|PF14602.6 evalue:7.2e-16 score:56.9 best_domain_score:52.0 name:Hexapep_2; db:Pfam-A.hmm|PF12464.8 evalue:6.3e-14 score:51.2 best_domain_score:50.7 name:Mac;
sprot_desc Putative acetyltransferase DDB_G0275913;
sprot_id sp|Q552S7|Y5913_DICDI;
sprot_target db:uniprot_sprot|sp|Q552S7|Y5913_DICDI 3 184 evalue:3.8e-51 qcov:98.90 identity:54.40;
108967 110100 CDS
ID metaerg.pl|00145
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478969.1 1 377 evalue:1.6e-169 qcov:100.00 identity:77.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF18845; PF18848; PF18849; PF18851;
pfam_desc Bacterial archaeo-eukaryotic release factor family 3; Bacterial archaeo-eukaryotic release factor family 6; Bacterial archaeo-eukaryotic release factor family 7; Bacterial archaeo-eukaryotic release factor family 8;
pfam_id baeRF_family3; baeRF_family6; baeRF_family7; baeRF_family8;
pfam_target db:Pfam-A.hmm|PF18845.1 evalue:8.2e-22 score:77.5 best_domain_score:76.8 name:baeRF_family3; db:Pfam-A.hmm|PF18848.1 evalue:2.9e-50 score:169.7 best_domain_score:169.2 name:baeRF_family6; db:Pfam-A.hmm|PF18849.1 evalue:8.2e-17 score:61.0 best_domain_score:57.8 name:baeRF_family7; db:Pfam-A.hmm|PF18851.1 evalue:3.1e-18 score:65.4 best_domain_score:59.0 name:baeRF_family8;
110506 111111 CDS
ID metaerg.pl|00146
allgo_ids GO:0005622; GO:0019843; GO:0015935; GO:0003735; GO:0006412;
allko_ids K02986;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478967.1 1 201 evalue:2.9e-106 qcov:100.00 identity:96.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00163; PF01479;
pfam_desc Ribosomal protein S4/S9 N-terminal domain; S4 domain;
pfam_id Ribosomal_S4; S4;
pfam_target db:Pfam-A.hmm|PF00163.19 evalue:7.4e-27 score:93.3 best_domain_score:92.6 name:Ribosomal_S4; db:Pfam-A.hmm|PF01479.25 evalue:3.2e-23 score:80.4 best_domain_score:79.7 name:S4;
sprot_desc 30S ribosomal protein S4;
sprot_id sp|Q82ZI6|RS4_ENTFA;
sprot_target db:uniprot_sprot|sp|Q82ZI6|RS4_ENTFA 1 201 evalue:4.0e-86 qcov:100.00 identity:77.60;
tigrfam_acc TIGR01017;
tigrfam_desc ribosomal protein uS4;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpsD_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01017 evalue:3.3e-77 score:257.9 best_domain_score:257.7 name:TIGR01017;
111766 111290 CDS
ID metaerg.pl|00147
allgo_ids GO:0005515; GO:0005829; GO:0070191;
allko_ids K01768; K08801; K08968;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000035.1_1 1 149 evalue:2.9e-53 qcov:94.30 identity:69.80;
kegg_pathway_id 00271; 00230;
kegg_pathway_name Methionine metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01590; PF13185;
pfam_desc GAF domain; GAF domain;
pfam_id GAF; GAF_2;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:4.3e-08 score:33.1 best_domain_score:32.8 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:1.4e-12 score:47.3 best_domain_score:46.9 name:GAF_2;
sprot_desc hypothetical protein;
sprot_id sp|O34553|YTSP_BACSU;
sprot_target db:uniprot_sprot|sp|O34553|YTSP_BACSU 8 148 evalue:1.3e-36 qcov:89.20 identity:53.20;
111896 113614 CDS
ID metaerg.pl|00148
allgo_ids GO:0000921; GO:0005940; GO:0016021; GO:0005886; GO:0000917;
allko_ids K06286;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190612.1 1 572 evalue:2.3e-185 qcov:100.00 identity:59.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF06160;
pfam_desc Septation ring formation regulator, EzrA;
pfam_id EzrA;
pfam_target db:Pfam-A.hmm|PF06160.12 evalue:5.7e-125 score:416.8 best_domain_score:416.6 name:EzrA;
sprot_desc Septation ring formation regulator EzrA;
sprot_id sp|Q838R5|EZRA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q838R5|EZRA_ENTFA 23 568 evalue:5.0e-57 qcov:95.50 identity:27.80;
tm_num 1;
111896 113614 transmembrane_helix
ID metaerg.pl|00149
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i111908-111967o;
113748 114884 CDS
ID metaerg.pl|00150
allgo_ids GO:0009058; GO:0030170; GO:0003824; GO:0051536; GO:0046872;
allko_ids K00825; K04487; K11717;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091266988.1 1 378 evalue:1.3e-155 qcov:100.00 identity:71.70;
kegg_pathway_id 00310; 00730; 00300;
kegg_pathway_name Lysine degradation; Thiamine metabolism; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00155; PF00266; PF01212;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Beta-eliminating lyase;
pfam_id Aminotran_1_2; Aminotran_5; Beta_elim_lyase;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:3.1e-09 score:35.7 best_domain_score:34.9 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:1.3e-79 score:267.0 best_domain_score:266.8 name:Aminotran_5; db:Pfam-A.hmm|PF01212.21 evalue:1.7e-05 score:23.5 best_domain_score:23.1 name:Beta_elim_lyase;
sprot_desc NifS/IcsS protein homolog;
sprot_id sp|P31672|NIFS_LACDA;
sprot_target db:uniprot_sprot|sp|P31672|NIFS_LACDA 1 378 evalue:9.1e-108 qcov:100.00 identity:53.80;
114895 116112 CDS
ID metaerg.pl|00151
allec_ids 2.8.1.4;
allgo_ids GO:0004810; GO:0005737; GO:0005524; GO:0016783; GO:0000049; GO:0009228; GO:0009229; GO:0034227;
allko_ids K03151;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190607.1 1 405 evalue:5.7e-170 qcov:100.00 identity:75.30;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF06508; PF02568; PF02926;
pfam_desc Queuosine biosynthesis protein QueC; Thiamine biosynthesis protein (ThiI); THUMP domain;
pfam_id QueC; ThiI; THUMP;
pfam_target db:Pfam-A.hmm|PF06508.13 evalue:9.7e-08 score:31.0 best_domain_score:18.1 name:QueC; db:Pfam-A.hmm|PF02568.14 evalue:3e-67 score:225.3 best_domain_score:224.7 name:ThiI; db:Pfam-A.hmm|PF02926.17 evalue:3.5e-21 score:75.0 best_domain_score:74.0 name:THUMP;
sprot_desc Probable tRNA sulfurtransferase;
sprot_id sp|Q1WT71|THII_LACS1;
sprot_target db:uniprot_sprot|sp|Q1WT71|THII_LACS1 1 392 evalue:5.5e-135 qcov:96.80 identity:62.00;
tigrfam_acc TIGR00342;
tigrfam_desc tRNA sulfurtransferase ThiI;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00342;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00342 evalue:4.9e-123 score:410.1 best_domain_score:409.8 name:TIGR00342;
116182 116685 CDS
ID metaerg.pl|00152
allec_ids 1.11.1.15;
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005623; GO:0008379; GO:0045454;
allko_ids K03386; K11185; K11186; K11065; K00430; K13279; K11188; K03564;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091266996.1 1 167 evalue:2.6e-68 qcov:100.00 identity:76.00;
kegg_pathway_id 00940; 00680; 00360; 00480;
kegg_pathway_name Phenylpropanoid biosynthesis; Methane metabolism; Phenylalanine metabolism; Glutathione metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:5.9e-27 score:93.3 best_domain_score:93.0 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:4.4e-22 score:77.6 best_domain_score:77.3 name:Redoxin;
sprot_desc Thiol peroxidase;
sprot_id sp|Q5HNJ2|TPX_STAEQ;
sprot_target db:uniprot_sprot|sp|Q5HNJ2|TPX_STAEQ 3 161 evalue:3.0e-23 qcov:95.20 identity:38.50;
116988 119633 CDS
ID metaerg.pl|00153
allec_ids 6.1.1.9;
allgo_ids GO:0004812; GO:0006418; GO:0005737; GO:0002161; GO:0005524; GO:0004832; GO:0006438;
allko_ids K01873;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190603.1 2 881 evalue:0.0e+00 qcov:99.90 identity:84.00;
kegg_pathway_id 00970; 00290;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Valine, leucine and isoleucine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF08264; PF00133; PF01406; PF09334; PF13603; PF10458;
pfam_desc Anticodon-binding domain of tRNA; tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (C) catalytic domain; tRNA synthetases class I (M); Leucyl-tRNA synthetase, Domain 2; Valyl tRNA synthetase tRNA binding arm;
pfam_id Anticodon_1; tRNA-synt_1; tRNA-synt_1e; tRNA-synt_1g; tRNA-synt_1_2; Val_tRNA-synt_C;
pfam_target db:Pfam-A.hmm|PF08264.13 evalue:7.9e-45 score:151.8 best_domain_score:150.6 name:Anticodon_1; db:Pfam-A.hmm|PF00133.22 evalue:1.4e-226 score:752.6 best_domain_score:743.9 name:tRNA-synt_1; db:Pfam-A.hmm|PF01406.19 evalue:4.9e-07 score:28.6 best_domain_score:20.6 name:tRNA-synt_1e; db:Pfam-A.hmm|PF09334.11 evalue:8.9e-30 score:102.9 best_domain_score:55.8 name:tRNA-synt_1g; db:Pfam-A.hmm|PF13603.6 evalue:3.3e-11 score:42.3 best_domain_score:33.1 name:tRNA-synt_1_2; db:Pfam-A.hmm|PF10458.9 evalue:2.9e-18 score:65.2 best_domain_score:65.2 name:Val_tRNA-synt_C;
sprot_desc Valine--tRNA ligase;
sprot_id sp|Q82ZW6|SYV_ENTFA;
sprot_target db:uniprot_sprot|sp|Q82ZW6|SYV_ENTFA 2 878 evalue:0.0e+00 qcov:99.50 identity:72.80;
tigrfam_acc TIGR00422;
tigrfam_desc valine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name valS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00422 evalue:0 score:1210.4 best_domain_score:1210.1 name:TIGR00422;
119636 120292 CDS
ID metaerg.pl|00154
allec_ids 3.1.3.-;
allgo_ids GO:0016787; GO:0000287; GO:0005975;
allko_ids K01194; K01838; K03731; K05344;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190600.1 1 218 evalue:1.7e-83 qcov:100.00 identity:71.10;
kegg_pathway_id 00010; 00500;
kegg_pathway_name Glycolysis / Gluconeogenesis; Starch and sucrose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id NADPHOS-DEPHOS-PWY; PWY-6456; PWY-5491; PWY-882; PWY-5083;
metacyc_pathway_name NAD phosphorylation and dephosphorylation;; serinol biosynthesis;; diethylphosphate degradation;; L-ascorbate biosynthesis I (L-galactose pathway);; NAD/NADH phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; Polyamine-Biosynthesis;; Phosphorus-Compounds;; Ascorbate-Biosynthesis;; NAD-Metabolism;;
pfam_acc PF12710; PF13419; PF00702;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase;
pfam_id HAD; HAD_2; Hydrolase;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:5e-07 score:29.5 best_domain_score:29.2 name:HAD; db:Pfam-A.hmm|PF13419.6 evalue:1.2e-30 score:106.2 best_domain_score:106.2 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:8.7e-19 score:67.9 best_domain_score:66.9 name:Hydrolase;
sprot_desc Phosphorylated carbohydrates phosphatase TM_1254;
sprot_id sp|Q9X0Y1|P1254_THEMA;
sprot_target db:uniprot_sprot|sp|Q9X0Y1|P1254_THEMA 6 178 evalue:1.3e-18 qcov:79.40 identity:28.30;
tigrfam_acc TIGR01509; TIGR01549;
tigrfam_desc HAD hydrolase, family IA, variant 3; HAD hydrolase, family IA, variant 1;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name HAD-SF-IA-v3; HAD-SF-IA-v1;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:1.8e-14 score:53.3 best_domain_score:40.1 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01549 evalue:8.8e-06 score:25.4 best_domain_score:21.7 name:TIGR01549;
120357 121043 CDS
ID metaerg.pl|00155
allgo_ids GO:0003677; GO:0046872; GO:0008237;
allko_ids K03630;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071847657.1 1 227 evalue:4.9e-102 qcov:99.60 identity:82.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00633; PF04002;
pfam_desc Helix-hairpin-helix motif; RadC-like JAB domain;
pfam_id HHH; RadC;
pfam_target db:Pfam-A.hmm|PF00633.23 evalue:9.4e-07 score:27.6 best_domain_score:26.6 name:HHH; db:Pfam-A.hmm|PF04002.15 evalue:6.4e-43 score:144.8 best_domain_score:144.2 name:RadC;
sprot_desc hypothetical protein;
sprot_id sp|Q82ZX1|Y2926_ENTFA;
sprot_target db:uniprot_sprot|sp|Q82ZX1|Y2926_ENTFA 8 223 evalue:9.2e-63 qcov:94.70 identity:54.60;
tigrfam_acc TIGR00608;
tigrfam_desc DNA repair protein RadC;
tigrfam_mainrole DNA metabolism;
tigrfam_name radc;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00608 evalue:5.4e-70 score:234.7 best_domain_score:234.5 name:TIGR00608;
121230 121430 CDS
ID metaerg.pl|00156
allgo_ids GO:0003676; GO:0005737; GO:0003677;
allko_ids K03704;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_034302391.1 1 66 evalue:2.7e-29 qcov:100.00 identity:98.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00313;
pfam_desc 'Cold-shock' DNA-binding domain;
pfam_id CSD;
pfam_target db:Pfam-A.hmm|PF00313.22 evalue:7e-31 score:105.1 best_domain_score:105.0 name:CSD;
sprot_desc Cold shock-like protein CspLA;
sprot_id sp|P0A356|CSPA_LISIN;
sprot_target db:uniprot_sprot|sp|P0A356|CSPA_LISIN 1 66 evalue:2.6e-26 qcov:100.00 identity:83.30;
121653 122663 CDS
ID metaerg.pl|00157
allgo_ids GO:0000902; GO:0005737; GO:0005524; GO:0008360;
allko_ids K03569;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478951.1 1 336 evalue:1.8e-169 qcov:100.00 identity:92.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00022; PF14450; PF00012; PF06723; PF11104;
pfam_desc Actin; Cell division protein FtsA; Hsp70 protein; MreB/Mbl protein; Type IV pilus assembly protein PilM;;
pfam_id Actin; FtsA; HSP70; MreB_Mbl; PilM_2;
pfam_target db:Pfam-A.hmm|PF00022.19 evalue:5.7e-13 score:47.5 best_domain_score:37.4 name:Actin; db:Pfam-A.hmm|PF14450.6 evalue:2.5e-10 score:39.9 best_domain_score:39.5 name:FtsA; db:Pfam-A.hmm|PF00012.20 evalue:2.2e-14 score:51.8 best_domain_score:51.4 name:HSP70; db:Pfam-A.hmm|PF06723.13 evalue:6.4e-138 score:458.3 best_domain_score:458.0 name:MreB_Mbl; db:Pfam-A.hmm|PF11104.8 evalue:2.2e-07 score:29.5 best_domain_score:13.8 name:PilM_2;
sprot_desc Cell shape-determining protein MreB;
sprot_id sp|Q01465|MREB_BACSU;
sprot_target db:uniprot_sprot|sp|Q01465|MREB_BACSU 1 336 evalue:1.1e-115 qcov:100.00 identity:62.50;
tigrfam_acc TIGR00904;
tigrfam_desc cell shape determining protein, MreB/Mrl family;
tigrfam_mainrole Cell envelope;
tigrfam_name mreB;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00904 evalue:3.4e-142 score:472.5 best_domain_score:472.3 name:TIGR00904;
122817 123668 CDS
ID metaerg.pl|00158
allgo_ids GO:0008360; GO:0005886;
allko_ids K03570;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091267006.1 1 283 evalue:1.1e-132 qcov:100.00 identity:86.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF04085;
pfam_desc rod shape-determining protein MreC;
pfam_id MreC;
pfam_target db:Pfam-A.hmm|PF04085.14 evalue:1.6e-43 score:147.4 best_domain_score:144.9 name:MreC;
sp YES;
sprot_desc Cell shape-determining protein MreC;
sprot_id sp|Q8Y6Y4|MREC_LISMO;
sprot_target db:uniprot_sprot|sp|Q8Y6Y4|MREC_LISMO 1 282 evalue:1.8e-47 qcov:99.60 identity:36.50;
tigrfam_acc TIGR00219;
tigrfam_desc rod shape-determining protein MreC;
tigrfam_mainrole Cell envelope;
tigrfam_name mreC;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00219 evalue:5e-55 score:185.8 best_domain_score:185.7 name:TIGR00219;
tm_num 1;
122817 122906 signal_peptide
ID metaerg.pl|00159
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
122817 123668 transmembrane_helix
ID metaerg.pl|00160
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i122847-122900o;
123671 124234 CDS
ID metaerg.pl|00161
allgo_ids GO:0008360; GO:0016021;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190588.1 1 187 evalue:8.8e-57 qcov:100.00 identity:67.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF04093;
pfam_desc rod shape-determining protein MreD;
pfam_id MreD;
pfam_target db:Pfam-A.hmm|PF04093.12 evalue:1.8e-16 score:59.9 best_domain_score:59.6 name:MreD;
tigrfam_acc TIGR03426;
tigrfam_desc rod shape-determining protein MreD;
tigrfam_mainrole Cell envelope;
tigrfam_name shape_MreD;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR03426 evalue:1.5e-16 score:59.9 best_domain_score:59.5 name:TIGR03426;
tm_num 5;
123671 124234 transmembrane_helix
ID metaerg.pl|00162
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i123689-123757o123800-123868i123887-123952o123980-124048i124085-124153o;
124252 124932 CDS
ID metaerg.pl|00163
allgo_ids GO:0000902; GO:0000917; GO:1901891;
allko_ids K03610;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190586.1 1 226 evalue:4.4e-79 qcov:100.00 identity:66.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF03775;
pfam_desc Septum formation inhibitor MinC, C-terminal domain;
pfam_id MinC_C;
pfam_target db:Pfam-A.hmm|PF03775.16 evalue:3.2e-24 score:84.1 best_domain_score:83.3 name:MinC_C;
sprot_desc Probable septum site-determining protein MinC;
sprot_id sp|Q8EPP3|MINC_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8EPP3|MINC_OCEIH 1 219 evalue:9.5e-20 qcov:96.90 identity:29.00;
124932 125726 CDS
ID metaerg.pl|00164
allgo_ids GO:0005524; GO:0016491; GO:0055114; GO:0009898; GO:0005829; GO:0005886; GO:0016887; GO:0000917; GO:0051782;
allko_ids K03609;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034302380.1 1 264 evalue:3.8e-130 qcov:100.00 identity:90.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13614; PF02374; PF01656; PF06564; PF00142; PF09140; PF10609; PF07015;
pfam_desc AAA domain; Anion-transporting ATPase; CobQ/CobB/MinD/ParA nucleotide binding domain; Cellulose biosynthesis protein BcsQ; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; ATPase MipZ; NUBPL iron-transfer P-loop NTPase; VirC1 protein;
pfam_id AAA_31; ArsA_ATPase; CbiA; CBP_BcsQ; Fer4_NifH; MipZ; ParA; VirC1;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:1.2e-24 score:86.4 best_domain_score:85.6 name:AAA_31; db:Pfam-A.hmm|PF02374.15 evalue:1.3e-08 score:33.6 best_domain_score:26.6 name:ArsA_ATPase; db:Pfam-A.hmm|PF01656.23 evalue:2.9e-24 score:84.8 best_domain_score:84.3 name:CbiA; db:Pfam-A.hmm|PF06564.12 evalue:4.6e-13 score:48.4 best_domain_score:47.4 name:CBP_BcsQ; db:Pfam-A.hmm|PF00142.18 evalue:1.3e-12 score:47.0 best_domain_score:24.1 name:Fer4_NifH; db:Pfam-A.hmm|PF09140.11 evalue:2.6e-11 score:42.6 best_domain_score:41.8 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:5.4e-21 score:74.4 best_domain_score:71.0 name:ParA; db:Pfam-A.hmm|PF07015.11 evalue:4.2e-05 score:22.2 best_domain_score:17.3 name:VirC1;
sprot_desc Septum site-determining protein MinD;
sprot_id sp|Q01464|MIND_BACSU;
sprot_target db:uniprot_sprot|sp|Q01464|MIND_BACSU 1 259 evalue:4.3e-96 qcov:98.10 identity:65.40;
tigrfam_acc TIGR01968;
tigrfam_desc septum site-determining protein MinD;
tigrfam_mainrole Cellular processes;
tigrfam_name minD_bact;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR01968 evalue:2.2e-114 score:380.4 best_domain_score:380.2 name:TIGR01968;
125899 126210 CDS
ID metaerg.pl|00165
allgo_ids GO:0005840; GO:0019843; GO:0003735; GO:0006412;
allko_ids K02888;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190581.1 1 103 evalue:2.3e-46 qcov:100.00 identity:94.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00829;
pfam_desc Ribosomal prokaryotic L21 protein;
pfam_id Ribosomal_L21p;
pfam_target db:Pfam-A.hmm|PF00829.21 evalue:5.8e-39 score:131.7 best_domain_score:131.5 name:Ribosomal_L21p;
sprot_desc 50S ribosomal protein L21;
sprot_id sp|Q1WTI0|RL21_LACS1;
sprot_target db:uniprot_sprot|sp|Q1WTI0|RL21_LACS1 1 102 evalue:5.3e-34 qcov:99.00 identity:67.60;
tigrfam_acc TIGR00061;
tigrfam_desc ribosomal protein bL21;
tigrfam_mainrole Protein synthesis;
tigrfam_name L21;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00061 evalue:6.3e-39 score:131.6 best_domain_score:131.5 name:TIGR00061;
126235 126576 CDS
ID metaerg.pl|00166
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091267017.1 1 113 evalue:9.8e-35 qcov:100.00 identity:69.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF04327;
pfam_desc Cysteine protease Prp;
pfam_id Peptidase_Prp;
pfam_target db:Pfam-A.hmm|PF04327.12 evalue:3.8e-26 score:90.4 best_domain_score:90.2 name:Peptidase_Prp;
126593 126877 CDS
ID metaerg.pl|00167
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02899;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091267019.1 1 94 evalue:4.8e-43 qcov:100.00 identity:96.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01016;
pfam_desc Ribosomal L27 protein;
pfam_id Ribosomal_L27;
pfam_target db:Pfam-A.hmm|PF01016.19 evalue:1.3e-34 score:117.3 best_domain_score:117.2 name:Ribosomal_L27;
sprot_desc 50S ribosomal protein L27;
sprot_id sp|C3P9C8|RL27_BACAA;
sprot_target db:uniprot_sprot|sp|C3P9C8|RL27_BACAA 1 93 evalue:6.5e-39 qcov:98.90 identity:86.00;
tigrfam_acc TIGR00062;
tigrfam_desc ribosomal protein bL27;
tigrfam_mainrole Protein synthesis;
tigrfam_name L27;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00062 evalue:1.8e-38 score:129.6 best_domain_score:129.4 name:TIGR00062;
127068 128102 CDS
ID metaerg.pl|00168
allgo_ids GO:0003677; GO:0006306; GO:0008170;
allko_ids K00571;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190573.1 8 344 evalue:4.3e-126 qcov:98.00 identity:66.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02384;
pfam_desc N-6 DNA Methylase;
pfam_id N6_Mtase;
pfam_target db:Pfam-A.hmm|PF02384.16 evalue:3.8e-10 score:38.7 best_domain_score:38.2 name:N6_Mtase;
sprot_desc hypothetical protein;
sprot_id sp|P37876|YTXK_BACSU;
sprot_target db:uniprot_sprot|sp|P37876|YTXK_BACSU 8 343 evalue:4.8e-39 qcov:97.70 identity:29.80;
128129 129322 CDS
ID metaerg.pl|00169
allec_ids 2.7.2.1;
allgo_ids GO:0005622; GO:0016301; GO:0016310; GO:0016774; GO:0005737; GO:0008776; GO:0005524; GO:0000287; GO:0006085; GO:0006082;
allko_ids K00925;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091267025.1 1 397 evalue:1.1e-210 qcov:100.00 identity:94.20;
kegg_pathway_id 00640; 00430; 00620;
kegg_pathway_name Propanoate metabolism; Taurine and hypotaurine metabolism; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id P164-PWY; PWY-5482; P441-PWY; PWY-5497; ACETATEUTIL-PWY; METH-ACETATE-PWY; P461-PWY; FERMENTATION-PWY; PROPFERM-PWY; PWY-5327; P3-PWY; P124-PWY; PWY0-1312; PWY-5485; P41-PWY; PWY-5676; P161-PWY; P142-PWY; PWY-5600; PWY-5100;
metacyc_pathway_name purine nucleobases degradation I (anaerobic);; pyruvate fermentation to acetate II;; superpathway of N-acetylneuraminate degradation;; purine nucleobases degradation II (anaerobic);; superpathway of acetate utilization and formation;; methanogenesis from acetate;; hexitol fermentation to lactate, formate, ethanol and acetate;; mixed acid fermentation;; L-alanine fermentation to propanoate and acetate;; superpathway of L-lysine degradation;; gallate degradation III (anaerobic);; Bifidobacterium shunt;; acetate and ATP formation from acetyl-CoA I;; pyruvate fermentation to acetate IV;; pyruvate fermentation to acetate and (S)-lactate I;; acetyl-CoA fermentation to butanoate II;; acetylene degradation (anaerobic);; pyruvate fermentation to acetate I;; pyruvate fermentation to acetate VII;; pyruvate fermentation to acetate and lactate II;;
metacyc_pathway_type Fermentation; Purine-Degradation;; Pyruvate-Acetate-Fermentation;; CARBOXYLATES-DEG; Super-Pathways;; Fermentation; Purine-Degradation;; CARBOXYLATES-DEG; Super-Pathways;; METHANOGENESIS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;; LYSINE-DEG; Super-Pathways;; GALLATE-DEG;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Acetate-Formation;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Acetyl-CoA-Butyrate; Super-Pathways;; Acetate-Formation; Pyruvate-Ethanol-Fermentation;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;;
pfam_acc PF00871;
pfam_desc Acetokinase family;
pfam_id Acetate_kinase;
pfam_target db:Pfam-A.hmm|PF00871.17 evalue:3.1e-157 score:522.5 best_domain_score:522.3 name:Acetate_kinase;
sprot_desc Acetate kinase;
sprot_id sp|Q833H0|ACKA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q833H0|ACKA_ENTFA 1 395 evalue:9.4e-156 qcov:99.50 identity:69.40;
tigrfam_acc TIGR00016;
tigrfam_desc acetate kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name ackA;
tigrfam_sub1role Fermentation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00016 evalue:1e-158 score:527.5 best_domain_score:527.3 name:TIGR00016;
129871 129413 CDS
ID metaerg.pl|00170
allgo_ids GO:0005737;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034302368.1 1 150 evalue:4.0e-68 qcov:98.70 identity:91.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1e-39 score:135.5 best_domain_score:135.3 name:Usp;
sprot_desc Putative universal stress protein SSP1056;
sprot_id sp|Q49YE0|Y1056_STAS1;
sprot_target db:uniprot_sprot|sp|Q49YE0|Y1056_STAS1 2 146 evalue:4.6e-34 qcov:95.40 identity:51.70;
131519 130257 CDS
ID metaerg.pl|00171
allgo_ids GO:0005524; GO:0003677; GO:0008047; GO:0009378; GO:0043142; GO:0006310; GO:0006281; GO:0006261; GO:0006282;
allko_ids K02340; K02343; K02341; K07478;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478935.1 1 418 evalue:6.1e-199 qcov:99.50 identity:84.00;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00004; PF07728; PF16193; PF12002; PF05496; PF00158; PF06068;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); AAA C-terminal domain; MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase RuvB P-loop domain; Sigma-54 interaction domain; TIP49 P-loop domain;
pfam_id AAA; AAA_5; AAA_assoc_2; MgsA_C; RuvB_N; Sigma54_activat; TIP49;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:7.5e-15 score:54.8 best_domain_score:53.9 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:1.4e-06 score:27.5 best_domain_score:22.3 name:AAA_5; db:Pfam-A.hmm|PF16193.5 evalue:5e-25 score:86.9 best_domain_score:86.0 name:AAA_assoc_2; db:Pfam-A.hmm|PF12002.8 evalue:1.4e-63 score:213.0 best_domain_score:212.1 name:MgsA_C; db:Pfam-A.hmm|PF05496.12 evalue:4.3e-15 score:55.0 best_domain_score:54.1 name:RuvB_N; db:Pfam-A.hmm|PF00158.26 evalue:5.9e-06 score:25.3 best_domain_score:16.3 name:Sigma54_activat; db:Pfam-A.hmm|PF06068.13 evalue:8.9e-06 score:24.4 best_domain_score:20.4 name:TIP49;
sprot_desc Uncharacterized AAA domain-containing protein YrvN;
sprot_id sp|O34528|YRVN_BACSU;
sprot_target db:uniprot_sprot|sp|O34528|YRVN_BACSU 3 417 evalue:4.2e-162 qcov:98.80 identity:67.70;
131699 133969 CDS
ID metaerg.pl|00172
allec_ids 6.3.2.2; 6.3.2.3; 6.3.2.2 6.3.2.3;
allgo_ids GO:0005524; GO:0046872; GO:0004357; GO:0004363;
allko_ids K01919;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478933.1 1 756 evalue:4.8e-303 qcov:100.00 identity:67.50;
kegg_pathway_id 00480; 00251;
kegg_pathway_name Glutathione metabolism; Glutamate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-4041; GLUTATHIONESYN-PWY;
metacyc_pathway_name γ-glutamyl cycle;; glutathione biosynthesis;;
metacyc_pathway_type Reductants; Super-Pathways;; Reductants;;
pfam_acc PF02655; PF18419; PF07478; PF01071; PF04262; PF08443;
pfam_desc ATP-grasp domain; ATP-grasp-like domain; D-ala D-ala ligase C-terminus; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Glutamate-cysteine ligase ; RimK-like ATP-grasp domain;
pfam_id ATP-grasp_3; ATP-grasp_6; Dala_Dala_lig_C; GARS_A; Glu_cys_ligase; RimK;
pfam_target db:Pfam-A.hmm|PF02655.14 evalue:2.3e-05 score:23.7 best_domain_score:18.1 name:ATP-grasp_3; db:Pfam-A.hmm|PF18419.1 evalue:2.4e-22 score:77.6 best_domain_score:75.9 name:ATP-grasp_6; db:Pfam-A.hmm|PF07478.13 evalue:2.2e-06 score:26.6 best_domain_score:22.9 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF01071.19 evalue:6.2e-06 score:25.3 best_domain_score:24.4 name:GARS_A; db:Pfam-A.hmm|PF04262.14 evalue:8.9e-83 score:277.2 best_domain_score:233.4 name:Glu_cys_ligase; db:Pfam-A.hmm|PF08443.11 evalue:3e-09 score:36.0 best_domain_score:20.3 name:RimK;
sprot_desc Glutathione biosynthesis bifunctional protein GshAB;
sprot_id sp|Q9CM00|GSHAB_PASMU;
sprot_target db:uniprot_sprot|sp|Q9CM00|GSHAB_PASMU 1 754 evalue:1.8e-203 qcov:99.70 identity:48.40;
tigrfam_acc TIGR01435;
tigrfam_desc glutamate--cysteine ligase/glutathione synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name glu_cys_lig_rel;
tigrfam_sub1role Glutathione and analogs;
tigrfam_target db:TIGRFAMs.hmm|TIGR01435 evalue:9.8e-236 score:783.5 best_domain_score:783.4 name:TIGR01435;
133985 135139 CDS
ID metaerg.pl|00173
allec_ids 2.8.1.7;
allgo_ids GO:0031071; GO:0051536; GO:0046872;
allko_ids K04487; K11717;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000153.1_17 1 381 evalue:2.1e-145 qcov:99.20 identity:66.90;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY0-1021; PWY0-1061;
metacyc_pathway_name L-alanine biosynthesis III;; superpathway of L-alanine biosynthesis;;
metacyc_pathway_type ALANINE-SYN;; ALANINE-SYN; Super-Pathways;;
pfam_acc PF00266;
pfam_desc Aminotransferase class-V;
pfam_id Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:1.6e-75 score:253.7 best_domain_score:253.4 name:Aminotran_5;
sprot_desc Putative cysteine desulfurase IscS 1;
sprot_id sp|O34599|ISCS1_BACSU;
sprot_target db:uniprot_sprot|sp|O34599|ISCS1_BACSU 4 378 evalue:1.3e-101 qcov:97.70 identity:49.30;
135177 135518 CDS
ID metaerg.pl|00174
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190558.1 1 113 evalue:1.7e-39 qcov:100.00 identity:76.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF08866;
pfam_desc Putative amino acid metabolism;
pfam_id DUF1831;
pfam_target db:Pfam-A.hmm|PF08866.10 evalue:9.9e-29 score:99.3 best_domain_score:99.1 name:DUF1831;
135718 136839 CDS
ID metaerg.pl|00175
allec_ids 2.8.1.13; 2.1.1.61;
allgo_ids GO:0004810; GO:0005737; GO:0005524; GO:0016783; GO:0000049; GO:0006400;
allko_ids K00566;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190556.1 1 373 evalue:1.0e-197 qcov:100.00 identity:88.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02540; PF02568; PF03054;
pfam_desc NAD synthase; Thiamine biosynthesis protein (ThiI); tRNA methyl transferase;
pfam_id NAD_synthase; ThiI; tRNA_Me_trans;
pfam_target db:Pfam-A.hmm|PF02540.17 evalue:4e-06 score:25.3 best_domain_score:24.2 name:NAD_synthase; db:Pfam-A.hmm|PF02568.14 evalue:0.00014 score:20.7 best_domain_score:18.8 name:ThiI; db:Pfam-A.hmm|PF03054.16 evalue:8.2e-146 score:484.6 best_domain_score:484.4 name:tRNA_Me_trans;
sprot_desc tRNA-specific 2-thiouridylase MnmA;
sprot_id sp|Q820U1|MNMA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q820U1|MNMA_ENTFA 3 373 evalue:4.5e-168 qcov:99.50 identity:74.70;
tigrfam_acc TIGR00420;
tigrfam_desc tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name trmU;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00420 evalue:4.3e-138 score:459.1 best_domain_score:458.9 name:TIGR00420;
136983 137738 CDS
ID metaerg.pl|00176
allgo_ids GO:0006355;
allko_ids K10778; K13530; K00567; K01649;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190553.1 1 249 evalue:1.9e-78 qcov:99.20 identity:57.00;
kegg_pathway_id 00620; 00290;
kegg_pathway_name Pyruvate metabolism; Valine, leucine and isoleucine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02311; PF12833; PF00165;
pfam_desc AraC-like ligand binding domain; Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id AraC_binding; HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF02311.19 evalue:1.2e-06 score:27.7 best_domain_score:27.0 name:AraC_binding; db:Pfam-A.hmm|PF12833.7 evalue:1.6e-19 score:69.2 best_domain_score:69.2 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:1.1e-16 score:59.7 best_domain_score:31.2 name:HTH_AraC;
137778 140174 CDS
ID metaerg.pl|00177
allec_ids 3.6.4.12;
allgo_ids GO:0005524; GO:0043141; GO:0003677;
allko_ids K03581;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478925.1 7 798 evalue:0.0e+00 qcov:99.20 identity:72.40;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13086; PF13245; PF13604; PF14490; PF18335; PF13538; PF01443;
pfam_desc AAA domain; AAA domain; AAA domain; Helix-hairpin-helix containing domain; ATP-dependent RecD-like DNA helicase SH3 domain; UvrD-like helicase C-terminal domain; Viral (Superfamily 1) RNA helicase;
pfam_id AAA_11; AAA_19; AAA_30; HHH_4; SH3_13; UvrD_C_2; Viral_helicase1;
pfam_target db:Pfam-A.hmm|PF13086.6 evalue:9.3e-09 score:34.7 best_domain_score:19.1 name:AAA_11; db:Pfam-A.hmm|PF13245.6 evalue:1.5e-37 score:128.4 best_domain_score:127.3 name:AAA_19; db:Pfam-A.hmm|PF13604.6 evalue:2.5e-50 score:170.1 best_domain_score:169.3 name:AAA_30; db:Pfam-A.hmm|PF14490.6 evalue:6.3e-30 score:102.2 best_domain_score:99.0 name:HHH_4; db:Pfam-A.hmm|PF18335.1 evalue:2.1e-21 score:74.7 best_domain_score:73.6 name:SH3_13; db:Pfam-A.hmm|PF13538.6 evalue:1.8e-14 score:52.5 best_domain_score:50.9 name:UvrD_C_2; db:Pfam-A.hmm|PF01443.18 evalue:2.4e-05 score:23.4 best_domain_score:9.2 name:Viral_helicase1;
sprot_desc ATP-dependent RecD-like DNA helicase;
sprot_id sp|O34481|RECDL_BACSU;
sprot_target db:uniprot_sprot|sp|O34481|RECDL_BACSU 7 753 evalue:4.2e-195 qcov:93.60 identity:46.80;
tigrfam_acc TIGR01448;
tigrfam_desc helicase, RecD/TraA family;
tigrfam_mainrole Unknown function;
tigrfam_name recD_rel;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01448 evalue:1.8e-245 score:815.4 best_domain_score:815.2 name:TIGR01448;
141122 140214 CDS
ID metaerg.pl|00178
allec_ids 2.7.-.-;
allgo_ids GO:0016301; GO:0005739; GO:0005524; GO:0017050; GO:0003951; GO:0006671; GO:0009409;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478923.1 3 302 evalue:4.8e-105 qcov:99.30 identity:60.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00781;
pfam_desc Diacylglycerol kinase catalytic domain;
pfam_id DAGK_cat;
pfam_target db:Pfam-A.hmm|PF00781.24 evalue:6.3e-25 score:86.5 best_domain_score:85.8 name:DAGK_cat;
sprot_desc Sphingoid long-chain bases kinase 2, mitochondrial;
sprot_id sp|O82359|LCKB2_ARATH;
sprot_target db:uniprot_sprot|sp|O82359|LCKB2_ARATH 7 282 evalue:5.5e-15 qcov:91.40 identity:28.00;
141316 142245 CDS
ID metaerg.pl|00179
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478922.1 1 296 evalue:4.7e-140 qcov:95.80 identity:87.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF10035; PF02588;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2179); Uncharacterised 5xTM membrane BCR, YitT family COG1284;
pfam_id DUF2179; YitT_membrane;
pfam_target db:Pfam-A.hmm|PF10035.9 evalue:3.4e-15 score:54.8 best_domain_score:53.5 name:DUF2179; db:Pfam-A.hmm|PF02588.15 evalue:7.4e-65 score:217.4 best_domain_score:217.0 name:YitT_membrane;
sprot_desc hypothetical protein;
sprot_id sp|O34792|YVJA_BACSU;
sprot_target db:uniprot_sprot|sp|O34792|YVJA_BACSU 14 280 evalue:8.1e-54 qcov:86.40 identity:41.90;
tm_num 6;
141316 142245 transmembrane_helix
ID metaerg.pl|00180
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i141349-141417o141490-141549i141568-141636o141646-141699i141757-141825o141838-141906i;
142540 145185 CDS
ID metaerg.pl|00181
allec_ids 6.1.1.7;
allgo_ids GO:0003676; GO:0005737; GO:0004813; GO:0005524; GO:0000049; GO:0008270; GO:0006419;
allko_ids K01872;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190816.1 1 878 evalue:0.0e+00 qcov:99.70 identity:79.20;
kegg_pathway_id 00252; 00970;
kegg_pathway_name Alanine and aspartate metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF02272; PF01411; PF07973;
pfam_desc DHHA1 domain; tRNA synthetases class II (A); Threonyl and Alanyl tRNA synthetase second additional domain;
pfam_id DHHA1; tRNA-synt_2c; tRNA_SAD;
pfam_target db:Pfam-A.hmm|PF02272.19 evalue:8.1e-23 score:80.6 best_domain_score:80.4 name:DHHA1; db:Pfam-A.hmm|PF01411.19 evalue:8.5e-198 score:657.5 best_domain_score:656.6 name:tRNA-synt_2c; db:Pfam-A.hmm|PF07973.14 evalue:7.2e-19 score:66.9 best_domain_score:65.6 name:tRNA_SAD;
sprot_desc Alanine--tRNA ligase;
sprot_id sp|Q835J8|SYA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q835J8|SYA_ENTFA 1 877 evalue:2.3e-295 qcov:99.50 identity:59.20;
tigrfam_acc TIGR00344;
tigrfam_desc alanine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name alaS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00344 evalue:1.7e-301 score:1001.7 best_domain_score:1001.5 name:TIGR00344;
145337 145594 CDS
ID metaerg.pl|00182
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190543.1 1 85 evalue:9.3e-38 qcov:100.00 identity:91.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF06135;
pfam_desc IreB regulatory phosphoprotein;
pfam_id IreB;
pfam_target db:Pfam-A.hmm|PF06135.12 evalue:3e-37 score:125.9 best_domain_score:125.7 name:IreB;
sprot_desc hypothetical protein;
sprot_id sp|Q03B00|Y786_LACP3;
sprot_target db:uniprot_sprot|sp|Q03B00|Y786_LACP3 1 85 evalue:6.7e-27 qcov:100.00 identity:68.20;
145596 146021 CDS
ID metaerg.pl|00183
allec_ids 3.1.-.-;
allgo_ids GO:0006364; GO:0005737; GO:0004518; GO:0000967;
allko_ids K07447;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190540.1 1 141 evalue:8.1e-63 qcov:100.00 identity:86.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF03652;
pfam_desc Holliday junction resolvase;
pfam_id RuvX;
pfam_target db:Pfam-A.hmm|PF03652.15 evalue:2.3e-43 score:147.0 best_domain_score:146.9 name:RuvX;
sprot_desc Putative pre-16S rRNA nuclease;
sprot_id sp|Q836B2|YQGF_ENTFA;
sprot_target db:uniprot_sprot|sp|Q836B2|YQGF_ENTFA 1 139 evalue:3.2e-50 qcov:98.60 identity:70.50;
tigrfam_acc TIGR00250;
tigrfam_desc putative transcription antitermination factor YqgF;
tigrfam_mainrole Unknown function;
tigrfam_name RNAse_H_YqgF;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00250 evalue:2.4e-46 score:156.2 best_domain_score:156.0 name:TIGR00250;
146046 146363 CDS
ID metaerg.pl|00184
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190538.1 1 105 evalue:2.8e-44 qcov:100.00 identity:91.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF06949;
pfam_desc Protein of unknown function (DUF1292);
pfam_id DUF1292;
pfam_target db:Pfam-A.hmm|PF06949.11 evalue:5.6e-16 score:58.5 best_domain_score:58.5 name:DUF1292;
sprot_desc hypothetical protein;
sprot_id sp|Q92BL2|Y1501_LISMO;
sprot_target db:uniprot_sprot|sp|Q92BL2|Y1501_LISMO 24 105 evalue:3.1e-21 qcov:78.10 identity:61.00;
146543 147628 CDS
ID metaerg.pl|00185
allec_ids 4.2.2.-;
allgo_ids GO:0005887; GO:0016829; GO:0008932; GO:0071555; GO:0009252;
allko_ids K07082;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_051503823.1 1 361 evalue:7.4e-177 qcov:100.00 identity:87.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02618;
pfam_desc YceG-like family;
pfam_id YceG;
pfam_target db:Pfam-A.hmm|PF02618.16 evalue:2.8e-79 score:265.8 best_domain_score:265.6 name:YceG;
sprot_desc Endolytic murein transglycosylase;
sprot_id sp|A0A0H2ZLQ1|MLTG_STRP2;
sprot_target db:uniprot_sprot|sp|A0A0H2ZLQ1|MLTG_STRP2 40 352 evalue:4.1e-57 qcov:86.70 identity:36.60;
tigrfam_acc TIGR00247;
tigrfam_desc conserved hypothetical protein, YceG family;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00247;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00247 evalue:9.6e-80 score:267.4 best_domain_score:267.2 name:TIGR00247;
tm_num 1;
146543 147628 transmembrane_helix
ID metaerg.pl|00186
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i146579-146647o;
147708 148346 CDS
ID metaerg.pl|00187
allec_ids 2.7.1.48;
allgo_ids GO:0004140; GO:0005524; GO:0015937; GO:0005737; GO:0016773; GO:0004849; GO:0044211; GO:0044206;
allko_ids K00876;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478916.1 1 212 evalue:3.7e-104 qcov:100.00 identity:90.60;
kegg_pathway_id 00983; 00240;
kegg_pathway_name Drug metabolism - other enzymes; Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY0-163; P1-PWY;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF13238; PF01121; PF00485;
pfam_desc AAA domain; Dephospho-CoA kinase; Phosphoribulokinase / Uridine kinase family;
pfam_id AAA_18; CoaE; PRK;
pfam_target db:Pfam-A.hmm|PF13238.6 evalue:4.5e-08 score:32.9 best_domain_score:32.5 name:AAA_18; db:Pfam-A.hmm|PF01121.20 evalue:1.3e-05 score:24.1 best_domain_score:13.0 name:CoaE; db:Pfam-A.hmm|PF00485.18 evalue:1.1e-45 score:155.1 best_domain_score:154.8 name:PRK;
sprot_desc Uridine kinase;
sprot_id sp|B7GIU0|URK_ANOFW;
sprot_target db:uniprot_sprot|sp|B7GIU0|URK_ANOFW 4 212 evalue:2.7e-85 qcov:98.60 identity:74.20;
tigrfam_acc TIGR00235;
tigrfam_desc uridine kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name udk;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00235 evalue:4.6e-91 score:303.2 best_domain_score:303.0 name:TIGR00235;
148496 148969 CDS
ID metaerg.pl|00188
allgo_ids GO:0003677; GO:0032784; GO:0070063;
allko_ids K03624;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091268695.1 1 157 evalue:6.7e-74 qcov:100.00 identity:93.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01272; PF03449;
pfam_desc Transcription elongation factor, GreA/GreB, C-term; Transcription elongation factor, N-terminal;
pfam_id GreA_GreB; GreA_GreB_N;
pfam_target db:Pfam-A.hmm|PF01272.19 evalue:5e-25 score:86.5 best_domain_score:85.7 name:GreA_GreB; db:Pfam-A.hmm|PF03449.15 evalue:1.6e-29 score:101.1 best_domain_score:100.7 name:GreA_GreB_N;
sprot_desc Transcription elongation factor GreA;
sprot_id sp|A7GT58|GREA_BACCN;
sprot_target db:uniprot_sprot|sp|A7GT58|GREA_BACCN 2 156 evalue:8.8e-57 qcov:98.70 identity:72.30;
tigrfam_acc TIGR01462;
tigrfam_desc transcription elongation factor GreA;
tigrfam_mainrole Transcription;
tigrfam_name greA;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR01462 evalue:8.2e-55 score:184.2 best_domain_score:184.0 name:TIGR01462;
149102 149839 CDS
ID metaerg.pl|00189
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091268690.1 1 245 evalue:5.7e-88 qcov:100.00 identity:62.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF09922;
pfam_desc Cell wall-active antibiotics response 4TMS YvqF;
pfam_id DUF2154;
pfam_target db:Pfam-A.hmm|PF09922.9 evalue:2.5e-34 score:116.8 best_domain_score:116.2 name:DUF2154;
tm_num 2;
149102 149839 transmembrane_helix
ID metaerg.pl|00190
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i149138-149206o149279-149347i;
149836 150888 CDS
ID metaerg.pl|00191
allec_ids 2.7.13.3;
allgo_ids GO:0000155; GO:0000160; GO:0016021; GO:0046983; GO:0005886; GO:0005524;
allko_ids K08282; K07704; K02484; K11640; K07642; K02478; K07718; K11623; K07683; K07778; K07673; K07639; K07646; K07641; K07777; K07682; K07654; K03407; K07680; K07675; K02486; K04757; K11617; K07676; K06379; K02480; K07681; K07636; K07653; K01768; K02668; K07674;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478914.1 1 345 evalue:4.0e-143 qcov:98.60 identity:77.40;
kegg_pathway_id 00230; 02020; 03090;
kegg_pathway_name Purine metabolism; Two-component system - General; Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02518; PF07730;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase;
pfam_id HATPase_c; HisKA_3;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:2e-09 score:37.2 best_domain_score:34.5 name:HATPase_c; db:Pfam-A.hmm|PF07730.13 evalue:4.7e-22 score:77.5 best_domain_score:76.0 name:HisKA_3;
sprot_desc Sensor histidine kinase LiaS;
sprot_id sp|O32198|LIAS_BACSU;
sprot_target db:uniprot_sprot|sp|O32198|LIAS_BACSU 16 345 evalue:1.1e-46 qcov:94.30 identity:35.40;
tm_num 2;
149836 150888 transmembrane_helix
ID metaerg.pl|00192
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i149854-149922o149965-150033i;
150893 151531 CDS
ID metaerg.pl|00193
allgo_ids GO:0006355; GO:0005737; GO:0003677; GO:0000160;
allko_ids K11527; K10715; K07678; K02482; K02480; K07653; K07636; K02489; K07716; K07710; K02668; K03388; K07674; K08479; K10916; K07647; K07675; K07717; K12767; K02486; K11383; K04757; K11357; K07644; K01769; K06379; K07676; K10681; K07679; K07648; K07651; K07718; K07768; K07641; K07646; K07673; K07652; K07654; K03407; K11231; K07677; K07708; K08282; K02484; K11711; K07642; K07694;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091268687.1 1 211 evalue:6.2e-91 qcov:99.50 identity:82.00;
kegg_pathway_id 00230; 05111; 00790; 02020; 04011; 03090;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Folate biosynthesis; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00196; PF00072;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain;
pfam_id GerE; Response_reg;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:8.9e-20 score:69.2 best_domain_score:69.2 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:5.2e-25 score:87.0 best_domain_score:86.2 name:Response_reg;
sprot_desc Response regulator protein VraR;
sprot_id sp|Q4L7J5|VRAR_STAHJ;
sprot_target db:uniprot_sprot|sp|Q4L7J5|VRAR_STAHJ 2 210 evalue:3.3e-59 qcov:98.60 identity:56.90;
153319 151649 CDS
ID metaerg.pl|00194
allec_ids 3.1.-.-;
allgo_ids GO:0005737; GO:0004534; GO:0004521; GO:0042802; GO:0003723; GO:0008270; GO:0006397; GO:0006364;
allko_ids K12574;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478911.1 1 556 evalue:1.3e-300 qcov:100.00 identity:92.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00753; PF12706; PF07521; PF17770;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain; Zn-dependent metallo-hydrolase RNA specificity domain; Ribonuclease J C-terminal domain;
pfam_id Lactamase_B; Lactamase_B_2; RMMBL; RNase_J_C;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:3.6e-15 score:55.7 best_domain_score:54.8 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:3.2e-11 score:42.4 best_domain_score:40.6 name:Lactamase_B_2; db:Pfam-A.hmm|PF07521.12 evalue:5.5e-11 score:41.5 best_domain_score:38.6 name:RMMBL; db:Pfam-A.hmm|PF17770.1 evalue:9e-23 score:80.4 best_domain_score:78.7 name:RNase_J_C;
sprot_desc Ribonuclease J1;
sprot_id sp|Q45493|RNJ1_BACSU;
sprot_target db:uniprot_sprot|sp|Q45493|RNJ1_BACSU 5 554 evalue:7.8e-225 qcov:98.90 identity:67.30;
tigrfam_acc TIGR00649;
tigrfam_desc beta-CASP ribonuclease, RNase J family;
tigrfam_mainrole Transcription;
tigrfam_name MG423;
tigrfam_sub1role Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00649 evalue:1.4e-205 score:683.0 best_domain_score:682.8 name:TIGR00649;
153559 154338 CDS
ID metaerg.pl|00195
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264901.1 1 258 evalue:9.5e-102 qcov:99.60 identity:68.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13419; PF00702; PF08282; PF05116;
pfam_desc Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase;
pfam_id HAD_2; Hydrolase; Hydrolase_3; S6PP;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:3.2e-06 score:26.6 best_domain_score:10.9 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:1.1e-11 score:44.6 best_domain_score:17.9 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:4.2e-60 score:202.9 best_domain_score:202.7 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:4.3e-18 score:65.0 best_domain_score:39.5 name:S6PP;
tigrfam_acc TIGR00099; TIGR01484;
tigrfam_desc Cof-like hydrolase; HAD hydrolase, family IIB;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name Cof-subfamily; HAD-SF-IIB;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00099 evalue:1.2e-60 score:204.4 best_domain_score:204.2 name:TIGR00099; db:TIGRFAMs.hmm|TIGR01484 evalue:2.1e-27 score:95.7 best_domain_score:95.5 name:TIGR01484;
154454 154526 tRNA
ID metaerg.pl|00196
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
name tRNA_Ala_ggc;
154574 155908 CDS
ID metaerg.pl|00197
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_051503822.1 1 444 evalue:1.2e-224 qcov:100.00 identity:90.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF07613;
pfam_desc Protein of unknown function (DUF1576);
pfam_id DUF1576;
pfam_target db:Pfam-A.hmm|PF07613.11 evalue:6.3e-105 score:347.5 best_domain_score:177.7 name:DUF1576;
tm_num 10;
154574 155908 transmembrane_helix
ID metaerg.pl|00198
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i154634-154687o154763-154831i154850-154903o155051-155119i155156-155224o155282-155350i155411-155479o155492-155545i155684-155752o155780-155839i;
156527 155946 CDS
ID metaerg.pl|00199
allec_ids 3.5.1.88;
allgo_ids GO:0046872; GO:0042586; GO:0006412;
allko_ids K01462;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264905.1 1 187 evalue:4.1e-81 qcov:96.90 identity:78.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01327;
pfam_desc Polypeptide deformylase;
pfam_id Pep_deformylase;
pfam_target db:Pfam-A.hmm|PF01327.21 evalue:4.1e-45 score:152.5 best_domain_score:152.2 name:Pep_deformylase;
sprot_desc Peptide deformylase;
sprot_id sp|Q82ZJ0|DEF_ENTFA;
sprot_target db:uniprot_sprot|sp|Q82ZJ0|DEF_ENTFA 1 186 evalue:2.4e-64 qcov:96.40 identity:62.40;
tigrfam_acc TIGR00079;
tigrfam_desc peptide deformylase;
tigrfam_mainrole Protein fate;
tigrfam_name pept_deformyl;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00079 evalue:4.2e-42 score:142.6 best_domain_score:142.3 name:TIGR00079;
156960 158066 CDS
ID metaerg.pl|00200
allec_ids 1.2.4.1;
allgo_ids GO:0016624; GO:0004739; GO:0006096;
allko_ids K00162; K00166; K11381; K00161;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034302321.1 1 368 evalue:8.2e-200 qcov:100.00 identity:94.80;
kegg_pathway_id 00252; 00290; 00620; 00280; 00010; 00020; 00650;
kegg_pathway_name Alanine and aspartate metabolism; Valine, leucine and isoleucine biosynthesis; Pyruvate metabolism; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Butanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5464; PYRUVDEHYD-PWY; PWY-5173;
metacyc_pathway_name superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; pyruvate decarboxylation to acetyl CoA;; superpathway of acetyl-CoA biosynthesis;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Acetyl-CoA-Biosynthesis; Super-Pathways;;
pfam_acc PF00676; PF02775;
pfam_desc Dehydrogenase E1 component; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain;
pfam_id E1_dh; TPP_enzyme_C;
pfam_target db:Pfam-A.hmm|PF00676.20 evalue:6.9e-92 score:306.8 best_domain_score:306.5 name:E1_dh; db:Pfam-A.hmm|PF02775.21 evalue:3.6e-06 score:26.1 best_domain_score:22.6 name:TPP_enzyme_C;
sprot_desc Pyruvate dehydrogenase E1 component subunit alpha;
sprot_id sp|Q5HGZ1|ODPA_STAAC;
sprot_target db:uniprot_sprot|sp|Q5HGZ1|ODPA_STAAC 7 368 evalue:1.2e-120 qcov:98.40 identity:58.30;
tigrfam_acc TIGR03181;
tigrfam_desc pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name PDH_E1_alph_x;
tigrfam_sub1role Pyruvate dehydrogenase;
tigrfam_target db:TIGRFAMs.hmm|TIGR03181 evalue:5.3e-135 score:448.8 best_domain_score:448.6 name:TIGR03181;
158069 159046 CDS
ID metaerg.pl|00201
allec_ids 1.2.4.1;
allgo_ids GO:0004739; GO:0006096;
allko_ids K11381; K00161; K00162; K00615; K00167;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034302319.1 1 325 evalue:1.6e-175 qcov:100.00 identity:97.80;
kegg_pathway_id 00020; 00290; 00710; 00010; 00030; 00280; 00650; 00620; 00252; 01051;
kegg_pathway_name Citrate cycle (TCA cycle); Valine, leucine and isoleucine biosynthesis; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Pentose phosphate pathway; Valine, leucine and isoleucine degradation; Butanoate metabolism; Pyruvate metabolism; Alanine and aspartate metabolism; Biosynthesis of ansamycins;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5173; PYRUVDEHYD-PWY; PWY-5464;
metacyc_pathway_name superpathway of acetyl-CoA biosynthesis;; pyruvate decarboxylation to acetyl CoA;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF02780; PF02779;
pfam_desc Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain;
pfam_id Transketolase_C; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF02780.20 evalue:6e-37 score:125.5 best_domain_score:123.4 name:Transketolase_C; db:Pfam-A.hmm|PF02779.24 evalue:7.8e-42 score:142.2 best_domain_score:141.5 name:Transket_pyr;
sprot_desc Pyruvate dehydrogenase E1 component subunit beta;
sprot_id sp|P0A0A1|ODPB_STAAM;
sprot_target db:uniprot_sprot|sp|P0A0A1|ODPB_STAAM 1 325 evalue:3.1e-133 qcov:100.00 identity:70.80;
159172 160527 CDS
ID metaerg.pl|00202
allec_ids 2.3.1.12;
allgo_ids GO:0016746; GO:0004742; GO:0006096;
allko_ids K11381; K09699; K00658; K00162; K00163; K00382;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190814.1 1 451 evalue:1.8e-209 qcov:100.00 identity:88.40;
kegg_pathway_id 00650; 00252; 00620; 00260; 00020; 00280; 00010; 00310; 00290;
kegg_pathway_name Butanoate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5464; PYRUVDEHYD-PWY; PWY-5173;
metacyc_pathway_name superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; pyruvate decarboxylation to acetyl CoA;; superpathway of acetyl-CoA biosynthesis;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Acetyl-CoA-Biosynthesis; Super-Pathways;;
pfam_acc PF00198; PF00364; PF13533; PF02817; PF13437;
pfam_desc 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme; Biotin-lipoyl like; e3 binding domain; HlyD family secretion protein;
pfam_id 2-oxoacid_dh; Biotin_lipoyl; Biotin_lipoyl_2; E3_binding; HlyD_3;
pfam_target db:Pfam-A.hmm|PF00198.23 evalue:2.8e-83 score:278.1 best_domain_score:277.8 name:2-oxoacid_dh; db:Pfam-A.hmm|PF00364.22 evalue:4.5e-21 score:73.7 best_domain_score:73.7 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:1.1e-10 score:40.5 best_domain_score:20.2 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF02817.17 evalue:8.2e-12 score:44.5 best_domain_score:43.3 name:E3_binding; db:Pfam-A.hmm|PF13437.6 evalue:1.6e-06 score:28.0 best_domain_score:13.3 name:HlyD_3;
sprot_desc Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex;
sprot_id sp|P11961|ODP2_GEOSE;
sprot_target db:uniprot_sprot|sp|P11961|ODP2_GEOSE 1 450 evalue:5.2e-118 qcov:99.80 identity:56.20;
160540 161946 CDS
ID metaerg.pl|00203
allec_ids 1.8.1.4;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0004148; GO:0009055; GO:0050660; GO:0045454; GO:0006096;
allko_ids K03388; K00383; K00658; K00384; K00219; K03885; K00356; K10797; K00529; K00382; K00363; K00362; K00266; K01008;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034302316.1 1 468 evalue:3.6e-248 qcov:100.00 identity:95.90;
kegg_pathway_id 00480; 00240; 00620; 00450; 00790; 00010; 00310; 00280; 00020; 00260; 00251; 00252; 00910; 00071; 00360; 00190;
kegg_pathway_name Glutathione metabolism; Pyrimidine metabolism; Pyruvate metabolism; Selenoamino acid metabolism; Folate biosynthesis; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine degradation; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Nitrogen metabolism; Fatty acid metabolism; Phenylalanine metabolism; Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5464; PYRUVDEHYD-PWY; GLYCLEAV-PWY; PWY-5046; PWY-5173; PWY-5084;
metacyc_pathway_name superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; pyruvate decarboxylation to acetyl CoA;; glycine cleavage;; 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;; superpathway of acetyl-CoA biosynthesis;; 2-oxoglutarate decarboxylation to succinyl-CoA;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; GLYCINE-DEG;; Respiration;; Acetyl-CoA-Biosynthesis; Super-Pathways;; Respiration;;
pfam_acc PF00890; PF12831; PF01134; PF00070; PF07992; PF02852;
pfam_desc FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id FAD_binding_2; FAD_oxidored; GIDA; Pyr_redox; Pyr_redox_2; Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:1.7e-06 score:26.6 best_domain_score:26.6 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:3.4e-07 score:29.2 best_domain_score:29.2 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:3.6e-10 score:38.7 best_domain_score:38.7 name:GIDA; db:Pfam-A.hmm|PF00070.27 evalue:2e-19 score:69.1 best_domain_score:66.8 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:5e-72 score:241.8 best_domain_score:241.4 name:Pyr_redox_2; db:Pfam-A.hmm|PF02852.22 evalue:7.1e-34 score:115.6 best_domain_score:114.1 name:Pyr_redox_dim;
sprot_desc Dihydrolipoyl dehydrogenase;
sprot_id sp|P11959|DLDH1_GEOSE;
sprot_target db:uniprot_sprot|sp|P11959|DLDH1_GEOSE 1 468 evalue:1.3e-175 qcov:100.00 identity:65.40;
tigrfam_acc TIGR01350;
tigrfam_desc dihydrolipoyl dehydrogenase;
tigrfam_name lipoamide_DH;
tigrfam_target db:TIGRFAMs.hmm|TIGR01350 evalue:6.9e-166 score:551.6 best_domain_score:551.5 name:TIGR01350;
162076 162855 CDS
ID metaerg.pl|00204
allec_ids 3.1.3.25;
allgo_ids GO:0046854; GO:0008934; GO:0052832; GO:0052833; GO:0046872; GO:0046855; GO:0007165;
allko_ids K01092;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190502.1 1 258 evalue:8.4e-90 qcov:99.60 identity:63.20;
kegg_pathway_id 00562; 00521;
kegg_pathway_name Inositol phosphate metabolism; Streptomycin biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-2301;
metacyc_pathway_name myo-inositol biosynthesis;;
metacyc_pathway_type Cyclitols-Biosynthesis;;
pfam_acc PF00459;
pfam_desc Inositol monophosphatase family;
pfam_id Inositol_P;
pfam_target db:Pfam-A.hmm|PF00459.25 evalue:9.3e-51 score:172.1 best_domain_score:171.9 name:Inositol_P;
sprot_desc Inositol-1-monophosphatase;
sprot_id sp|Q45499|SUHB_BACSU;
sprot_target db:uniprot_sprot|sp|Q45499|SUHB_BACSU 5 254 evalue:1.8e-43 qcov:96.50 identity:37.20;
163055 164887 CDS
ID metaerg.pl|00205
allgo_ids GO:0003924; GO:0005525; GO:0005829; GO:1990904; GO:0006412;
allko_ids K00955; K00956; K00860; K06207;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478893.1 1 610 evalue:0.0e+00 qcov:100.00 identity:93.60;
kegg_pathway_id 00230; 00920; 00450;
kegg_pathway_name Purine metabolism; Sulfur metabolism; Selenoamino acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00679; PF14492; PF00009; PF03144; PF01926;
pfam_desc Elongation factor G C-terminus; Elongation Factor G, domain II; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; 50S ribosome-binding GTPase;
pfam_id EFG_C; EFG_II; GTP_EFTU; GTP_EFTU_D2; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00679.24 evalue:1.4e-23 score:82.0 best_domain_score:80.7 name:EFG_C; db:Pfam-A.hmm|PF14492.6 evalue:5.5e-08 score:32.0 best_domain_score:30.8 name:EFG_II; db:Pfam-A.hmm|PF00009.27 evalue:1.6e-54 score:183.6 best_domain_score:182.8 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:5.4e-11 score:42.0 best_domain_score:40.3 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF01926.23 evalue:1.8e-07 score:30.5 best_domain_score:29.3 name:MMR_HSR1;
sprot_desc GTP-binding protein TypA/BipA homolog;
sprot_id sp|O07631|TYPA_BACSU;
sprot_target db:uniprot_sprot|sp|O07631|TYPA_BACSU 1 607 evalue:3.9e-270 qcov:99.50 identity:76.40;
tigrfam_acc TIGR00231; TIGR01394;
tigrfam_desc small GTP-binding protein domain; GTP-binding protein TypA/BipA;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; TypA_BipA;
tigrfam_sub1role General; Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:9.5e-23 score:79.9 best_domain_score:79.0 name:TIGR00231; db:TIGRFAMs.hmm|TIGR01394 evalue:4.3e-282 score:935.8 best_domain_score:935.6 name:TIGR01394;
164976 165248 CDS
ID metaerg.pl|00206
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190497.1 1 89 evalue:3.2e-36 qcov:98.90 identity:86.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF07408;
pfam_desc Protein of unknown function (DUF1507);
pfam_id DUF1507;
pfam_target db:Pfam-A.hmm|PF07408.11 evalue:1.9e-28 score:97.4 best_domain_score:97.1 name:DUF1507;
sprot_desc hypothetical protein;
sprot_id sp|Q831P3|Y2458_ENTFA;
sprot_target db:uniprot_sprot|sp|Q831P3|Y2458_ENTFA 9 90 evalue:7.4e-16 qcov:91.10 identity:48.80;
165324 165629 CDS
ID metaerg.pl|00207
allgo_ids GO:0005737;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190494.1 1 95 evalue:4.8e-33 qcov:94.10 identity:72.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF09902;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2129);
pfam_id DUF2129;
pfam_target db:Pfam-A.hmm|PF09902.9 evalue:5.2e-24 score:83.3 best_domain_score:83.1 name:DUF2129;
sprot_desc hypothetical protein;
sprot_id sp|Q831P7|Y2453_ENTFA;
sprot_target db:uniprot_sprot|sp|Q831P7|Y2453_ENTFA 5 77 evalue:3.3e-12 qcov:72.30 identity:42.50;
165648 166211 CDS
ID metaerg.pl|00208
allec_ids 2.1.1.-; 2.1.1.171;
allgo_ids GO:0009007; GO:0032775; GO:0008168; GO:0031167;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264927.1 1 181 evalue:3.2e-59 qcov:96.80 identity:64.10;
kegg_pathway_id 00150; 00380; 00340; 00350; 00450; 00626;
kegg_pathway_name Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism; Tyrosine metabolism; Selenoamino acid metabolism; Naphthalene and anthracene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6153; ALL-CHORISMATE-PWY; PWY-3542; PWY-4021; PWY-5041; CODH-PWY; PWY-6442; PWY-6575; PWY-5467; PWY-6477; PWY-1422; PWY-5729; PWY-6113; PWY-5305; PWYG-321; PWY-5864; PWY-5975; PWY-1061; PWY-5876; PWY-6154; PWY-6424; UBISYN-PWY; PWY-6142; PWY-5856; METH-ACETATE-PWY; PWY-6303; PWY-5857; PWY-6151; PWY-5209; PWY-5855; PWY-6292; PWY-5479; PWY-5987; PWY-6427; PWY-6395; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-6519; PWY-5773; PWY-5328; METHIONINE-DEG1-PWY; PWY-5116; PWY-1581; CO2FORM-PWY;
metacyc_pathway_name autoinducer AI-2 biosynthesis I;; superpathway of chorismate metabolism;; choline biosynthesis II;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; gramine biosynthesis;; gibberellin inactivation II (methylation);; vitamin E biosynthesis (tocopherols);; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; autoinducer AI-2 biosynthesis II (Vibrio);; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; methanogenesis from acetate;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; S-adenosyl-L-methionine cycle I;; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; xanthohumol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;;
metacyc_pathway_type Autoinducer-Biosynthesis;; Super-Pathways;; Choline-Biosynthesis;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Autotrophic-CO2-Fixation;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Autoinducer-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;;
pfam_acc PF03602; PF02086; PF09445; PF13847; PF02475; PF05175; PF06325; PF04378; PF02005;
pfam_desc Conserved hypothetical protein 95; D12 class N6 adenine-specific DNA methyltransferase; RNA cap guanine-N2 methyltransferase; Methyltransferase domain; Met-10+ like-protein; Methyltransferase small domain; Ribosomal protein L11 methyltransferase (PrmA); Ribosomal RNA large subunit methyltransferase D, RlmJ; N2,N2-dimethylguanosine tRNA methyltransferase;
pfam_id Cons_hypoth95; MethyltransfD12; Methyltransf_15; Methyltransf_31; Met_10; MTS; PrmA; RsmJ; TRM;
pfam_target db:Pfam-A.hmm|PF03602.15 evalue:4.8e-60 score:201.6 best_domain_score:201.4 name:Cons_hypoth95; db:Pfam-A.hmm|PF02086.15 evalue:2.1e-08 score:33.4 best_domain_score:20.8 name:MethyltransfD12; db:Pfam-A.hmm|PF09445.10 evalue:9e-08 score:31.1 best_domain_score:30.6 name:Methyltransf_15; db:Pfam-A.hmm|PF13847.6 evalue:2.6e-08 score:33.1 best_domain_score:32.8 name:Methyltransf_31; db:Pfam-A.hmm|PF02475.16 evalue:1.1e-05 score:24.6 best_domain_score:24.3 name:Met_10; db:Pfam-A.hmm|PF05175.14 evalue:1.8e-08 score:33.4 best_domain_score:33.0 name:MTS; db:Pfam-A.hmm|PF06325.13 evalue:1.7e-07 score:30.2 best_domain_score:30.1 name:PrmA; db:Pfam-A.hmm|PF04378.13 evalue:5.6e-05 score:21.7 best_domain_score:21.4 name:RsmJ; db:Pfam-A.hmm|PF02005.16 evalue:3.5e-06 score:25.7 best_domain_score:25.5 name:TRM;
sprot_desc Putative rRNA methyltransferase YlbH;
sprot_id sp|O34331|YLBH_BACSU;
sprot_target db:uniprot_sprot|sp|O34331|YLBH_BACSU 1 182 evalue:5.1e-35 qcov:97.30 identity:40.70;
tigrfam_acc TIGR00095;
tigrfam_desc 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00095;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00095 evalue:3.8e-52 score:175.9 best_domain_score:175.7 name:TIGR00095;
166204 166701 CDS
ID metaerg.pl|00209
allec_ids 2.7.7.3;
allgo_ids GO:0003824; GO:0009058; GO:0005737; GO:0005524; GO:0004595; GO:0015937;
allko_ids K00954;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478887.1 1 162 evalue:2.7e-57 qcov:98.20 identity:70.40;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-4242; PANTOSYN-PWY; PWY-4221; COA-PWY;
metacyc_pathway_name ; superpathway of coenzyme A biosynthesis I (bacteria);; superpathway of coenzyme A biosynthesis II (plants);; coenzyme A biosynthesis I (prokaryotic);;
metacyc_pathway_type ; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis;;
pfam_acc PF01467;
pfam_desc Cytidylyltransferase-like;
pfam_id CTP_transf_like;
pfam_target db:Pfam-A.hmm|PF01467.26 evalue:4.7e-17 score:61.8 best_domain_score:61.3 name:CTP_transf_like;
sprot_desc Phosphopantetheine adenylyltransferase;
sprot_id sp|A5IJ44|COAD_THEP1;
sprot_target db:uniprot_sprot|sp|A5IJ44|COAD_THEP1 3 161 evalue:7.1e-33 qcov:96.40 identity:46.50;
tigrfam_acc TIGR00125; TIGR01510;
tigrfam_desc cytidyltransferase-like domain; pantetheine-phosphate adenylyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cyt_tran_rel; coaD_prev_kdtB;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00125 evalue:1.5e-16 score:59.5 best_domain_score:58.4 name:TIGR00125; db:TIGRFAMs.hmm|TIGR01510 evalue:3.4e-51 score:172.5 best_domain_score:172.3 name:TIGR01510;
166702 167736 CDS
ID metaerg.pl|00210
allgo_ids GO:0004176; GO:0004252; GO:0006508; GO:0016021; GO:0005886; GO:0005524; GO:0030163;
allko_ids K07177;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264931.1 1 342 evalue:6.0e-120 qcov:99.40 identity:64.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF05362; PF13180;
pfam_desc Lon protease (S16) C-terminal proteolytic domain; PDZ domain;
pfam_id Lon_C; PDZ_2;
pfam_target db:Pfam-A.hmm|PF05362.13 evalue:4e-09 score:35.5 best_domain_score:34.6 name:Lon_C; db:Pfam-A.hmm|PF13180.6 evalue:1.3e-08 score:34.3 best_domain_score:32.2 name:PDZ_2;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|O34470|YLBL_BACSU;
sprot_target db:uniprot_sprot|sp|O34470|YLBL_BACSU 1 342 evalue:2.7e-50 qcov:99.40 identity:36.20;
tm_num 1;
166702 166803 signal_peptide
ID metaerg.pl|00211
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
166702 167736 transmembrane_helix
ID metaerg.pl|00212
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i166720-166788o;
167877 168515 CDS
ID metaerg.pl|00213
allgo_ids GO:0003677; GO:0016021; GO:0005886; GO:0006281; GO:0030420;
allko_ids K02237;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus;s__Streptococcus sp900104285;
genomedb_acc GCF_900104285.1;
genomedb_target db:genomedb|GCF_900104285.1|WP_093584937.1 1 212 evalue:1.0e-37 qcov:100.00 identity:40.30;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00633; PF12836; PF14520; PF10531; PF03934;
pfam_desc Helix-hairpin-helix motif; Helix-hairpin-helix motif; Helix-hairpin-helix domain; SLBB domain; Type II secretion system (T2SS), protein K;
pfam_id HHH; HHH_3; HHH_5; SLBB; T2SSK;
pfam_target db:Pfam-A.hmm|PF00633.23 evalue:3.4e-08 score:32.2 best_domain_score:16.0 name:HHH; db:Pfam-A.hmm|PF12836.7 evalue:2.9e-20 score:71.5 best_domain_score:70.8 name:HHH_3; db:Pfam-A.hmm|PF14520.6 evalue:3.4e-09 score:36.4 best_domain_score:28.2 name:HHH_5; db:Pfam-A.hmm|PF10531.9 evalue:1e-10 score:40.6 best_domain_score:39.9 name:SLBB; db:Pfam-A.hmm|PF03934.13 evalue:1.9e-05 score:23.5 best_domain_score:22.7 name:T2SSK;
sprot_desc ComE operon protein 1;
sprot_id sp|P39694|COMEA_BACSU;
sprot_target db:uniprot_sprot|sp|P39694|COMEA_BACSU 13 211 evalue:3.4e-27 qcov:93.90 identity:36.50;
tigrfam_acc TIGR00426;
tigrfam_desc competence protein ComEA helix-hairpin-helix repeat region;
tigrfam_mainrole Cellular processes;
tigrfam_name TIGR00426;
tigrfam_sub1role DNA transformation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00426 evalue:1.2e-20 score:72.5 best_domain_score:71.7 name:TIGR00426;
tm_num 1;
167877 168515 transmembrane_helix
ID metaerg.pl|00214
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i167895-167963o;
168602 169087 CDS
ID metaerg.pl|00215
allec_ids 3.5.-.-;
allgo_ids GO:0002100; GO:0008251; GO:0004132; GO:0008270; GO:0006220;
allko_ids K01493;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034299368.1 1 157 evalue:3.9e-77 qcov:97.50 identity:89.20;
kegg_pathway_id 03090; 00240;
kegg_pathway_name Type II secretion system; Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00383; PF14437;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase;
pfam_id dCMP_cyt_deam_1; MafB19-deam;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:8e-27 score:92.3 best_domain_score:91.6 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:6.9e-16 score:57.5 best_domain_score:57.2 name:MafB19-deam;
sprot_desc ComE operon protein 2;
sprot_id sp|P32393|COMEB_BACSU;
sprot_target db:uniprot_sprot|sp|P32393|COMEB_BACSU 3 142 evalue:1.6e-53 qcov:87.00 identity:63.60;
tigrfam_acc TIGR02571;
tigrfam_desc ComE operon protein 2;
tigrfam_name ComEB;
tigrfam_target db:TIGRFAMs.hmm|TIGR02571 evalue:1.1e-81 score:271.2 best_domain_score:271.0 name:TIGR02571;
169138 171447 CDS
ID metaerg.pl|00216
allgo_ids GO:0016021; GO:0005886; GO:0030420;
allko_ids K02238;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190480.1 3 753 evalue:2.1e-168 qcov:97.70 identity:42.80;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF03772; PF00753;
pfam_desc Competence protein; Metallo-beta-lactamase superfamily;
pfam_id Competence; Lactamase_B;
pfam_target db:Pfam-A.hmm|PF03772.16 evalue:1.2e-47 score:161.7 best_domain_score:161.7 name:Competence; db:Pfam-A.hmm|PF00753.27 evalue:1.7e-11 score:43.7 best_domain_score:40.3 name:Lactamase_B;
sprot_desc ComE operon protein 3;
sprot_id sp|P39695|COMEC_BACSU;
sprot_target db:uniprot_sprot|sp|P39695|COMEC_BACSU 72 744 evalue:6.8e-78 qcov:87.50 identity:29.10;
tigrfam_acc TIGR00360; TIGR00361;
tigrfam_desc ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2;
tigrfam_mainrole Unknown function; Cellular processes;
tigrfam_name ComEC_N-term; ComEC_Rec2;
tigrfam_sub1role General; DNA transformation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00360 evalue:1.7e-28 score:99.2 best_domain_score:99.2 name:TIGR00360; db:TIGRFAMs.hmm|TIGR00361 evalue:8.4e-94 score:314.1 best_domain_score:313.5 name:TIGR00361;
tm_num 7;
169138 171447 transmembrane_helix
ID metaerg.pl|00217
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i169162-169215o169882-169950i170029-170124o170167-170235i170254-170322o170437-170505i170542-170610o;
171444 172469 CDS
ID metaerg.pl|00218
allec_ids 2.7.7.7;
allgo_ids GO:0003677; GO:0003887; GO:0006260; GO:0009360;
allko_ids K02340;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190477.1 1 341 evalue:1.3e-127 qcov:100.00 identity:67.40;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF06144;
pfam_desc DNA polymerase III, delta subunit;
pfam_id DNA_pol3_delta;
pfam_target db:Pfam-A.hmm|PF06144.13 evalue:2.9e-39 score:133.9 best_domain_score:133.9 name:DNA_pol3_delta;
sprot_desc hypothetical protein;
sprot_id sp|P54459|YQEN_BACSU;
sprot_target db:uniprot_sprot|sp|P54459|YQEN_BACSU 9 337 evalue:2.1e-63 qcov:96.50 identity:38.90;
tigrfam_acc TIGR01128;
tigrfam_desc DNA polymerase III, delta subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name holA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01128 evalue:5.2e-78 score:261.7 best_domain_score:261.5 name:TIGR01128;
172630 172881 CDS
ID metaerg.pl|00219
allgo_ids GO:0003723; GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02968;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190475.1 1 83 evalue:5.5e-27 qcov:100.00 identity:81.90;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01649;
pfam_desc Ribosomal protein S20;
pfam_id Ribosomal_S20p;
pfam_target db:Pfam-A.hmm|PF01649.18 evalue:9.2e-23 score:79.9 best_domain_score:79.8 name:Ribosomal_S20p;
sprot_desc 30S ribosomal protein S20;
sprot_id sp|P66504|RS20_LISIN;
sprot_target db:uniprot_sprot|sp|P66504|RS20_LISIN 1 83 evalue:9.2e-13 qcov:100.00 identity:53.00;
tigrfam_acc TIGR00029;
tigrfam_desc ribosomal protein bS20;
tigrfam_mainrole Protein synthesis;
tigrfam_name S20;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00029 evalue:1.3e-19 score:69.6 best_domain_score:69.5 name:TIGR00029;
172971 174962 CDS
ID metaerg.pl|00220
allec_ids 3.1.25.-;
allgo_ids GO:0003677; GO:0005524; GO:0016787; GO:0005737; GO:0009380; GO:0016887; GO:0009381; GO:0006289; GO:0009432;
allko_ids K05591; K10896; K03702;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190472.1 1 661 evalue:0.0e+00 qcov:99.70 identity:91.10;
kegg_pathway_id 03420;
kegg_pathway_name Nucleotide excision repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00271; PF04851; PF02151; PF12344; PF17757;
pfam_desc Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; UvrB/uvrC motif; Ultra-violet resistance protein B; UvrB interaction domain;
pfam_id Helicase_C; ResIII; UVR; UvrB; UvrB_inter;
pfam_target db:Pfam-A.hmm|PF00271.31 evalue:1e-18 score:66.9 best_domain_score:66.9 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:2.4e-12 score:46.4 best_domain_score:46.4 name:ResIII; db:Pfam-A.hmm|PF02151.19 evalue:4.2e-09 score:35.1 best_domain_score:34.3 name:UVR; db:Pfam-A.hmm|PF12344.8 evalue:3.1e-24 score:83.8 best_domain_score:82.1 name:UvrB; db:Pfam-A.hmm|PF17757.1 evalue:7.3e-35 score:118.3 best_domain_score:114.3 name:UvrB_inter;
sprot_desc UvrABC system protein B;
sprot_id sp|Q837R9|UVRB_ENTFA;
sprot_target db:uniprot_sprot|sp|Q837R9|UVRB_ENTFA 5 658 evalue:4.9e-274 qcov:98.60 identity:72.50;
tigrfam_acc TIGR00631;
tigrfam_desc excinuclease ABC subunit B;
tigrfam_mainrole DNA metabolism;
tigrfam_name uvrb;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00631 evalue:0 score:1085.5 best_domain_score:1085.3 name:TIGR00631;
175280 175822 CDS
ID metaerg.pl|00221
allec_ids 2.4.2.9;
allgo_ids GO:0009116; GO:0003723; GO:0004845; GO:0006353;
allko_ids K02825; K00762;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190470.1 1 178 evalue:3.8e-73 qcov:98.90 identity:84.80;
kegg_pathway_id 00983; 00240;
kegg_pathway_name Drug metabolism - other enzymes; Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY0-163; P1-PWY;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:7.6e-23 score:80.0 best_domain_score:79.7 name:Pribosyltran;
sprot_desc Bifunctional protein pyrR;
sprot_id sp|P0DH77|PYRR_ENTFA;
sprot_target db:uniprot_sprot|sp|P0DH77|PYRR_ENTFA 6 178 evalue:5.7e-52 qcov:96.10 identity:60.10;
176091 177011 CDS
ID metaerg.pl|00222
allec_ids 2.1.3.2;
allgo_ids GO:0006520; GO:0016597; GO:0016743; GO:0004070; GO:0006207; GO:0044205;
allko_ids K00609; K11540; K01954; K01956; K00610; K01955; K11541;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190467.1 1 306 evalue:1.7e-153 qcov:100.00 identity:87.90;
kegg_pathway_id 00251; 00252; 00240;
kegg_pathway_name Glutamate metabolism; Alanine and aspartate metabolism; Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PRPP-PWY; PWY-5686; PWY0-162;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;;
metacyc_pathway_type Super-Pathways;; UMP-Biosynthesis;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF00185; PF02729;
pfam_desc Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain;
pfam_id OTCace; OTCace_N;
pfam_target db:Pfam-A.hmm|PF00185.24 evalue:1.3e-20 score:73.3 best_domain_score:70.6 name:OTCace; db:Pfam-A.hmm|PF02729.21 evalue:1.4e-35 score:121.8 best_domain_score:121.1 name:OTCace_N;
sprot_desc Aspartate carbamoyltransferase;
sprot_id sp|Q8DUP5|PYRB_STRMU;
sprot_target db:uniprot_sprot|sp|Q8DUP5|PYRB_STRMU 9 304 evalue:3.0e-101 qcov:96.70 identity:61.30;
tigrfam_acc TIGR00670;
tigrfam_desc aspartate carbamoyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name asp_carb_tr;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00670 evalue:3e-84 score:281.9 best_domain_score:281.6 name:TIGR00670;
177028 178311 CDS
ID metaerg.pl|00223
allec_ids 3.5.2.3;
allgo_ids GO:0016787; GO:0004151; GO:0008270; GO:0044205;
allko_ids K01465;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190464.1 1 427 evalue:4.9e-204 qcov:100.00 identity:82.70;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PRPP-PWY; PWY-5686; PWY0-162;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;;
metacyc_pathway_type Super-Pathways;; UMP-Biosynthesis;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF01979; PF07969; PF12890;
pfam_desc Amidohydrolase family; Amidohydrolase family; Dihydro-orotase-like;
pfam_id Amidohydro_1; Amidohydro_3; DHOase;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:9.5e-44 score:149.3 best_domain_score:148.8 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:6.5e-17 score:61.4 best_domain_score:32.5 name:Amidohydro_3; db:Pfam-A.hmm|PF12890.7 evalue:2.8e-28 score:97.8 best_domain_score:97.3 name:DHOase;
sprot_desc Dihydroorotase;
sprot_id sp|Q834E0|PYRC_ENTFA;
sprot_target db:uniprot_sprot|sp|Q834E0|PYRC_ENTFA 1 427 evalue:1.3e-147 qcov:100.00 identity:60.50;
tigrfam_acc TIGR00857;
tigrfam_desc dihydroorotase, multifunctional complex type;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name pyrC_multi;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00857 evalue:9.6e-130 score:432.4 best_domain_score:432.2 name:TIGR00857;
178308 179399 CDS
ID metaerg.pl|00224
allec_ids 6.3.5.5;
allgo_ids GO:0016787; GO:0005524; GO:0004088; GO:0006207; GO:0044205; GO:0006526; GO:0006541;
allko_ids K01663; K01956; K01656; K02619; K03342; K01657; K11540; K00609; K01954; K01664; K01665; K01951; K01658; K13501; K01955; K11541; K13950; K13497;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190461.1 1 363 evalue:2.3e-202 qcov:100.00 identity:93.70;
kegg_pathway_id 00240; 00230; 00400; 00983; 00790; 00620; 00252; 00251; 02020;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Drug metabolism - other enzymes; Folate biosynthesis; Pyruvate metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id ARGSYN-PWY; PWY-5686; PRPP-PWY; PWY-5154; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; PWY0-162;
metacyc_pathway_name L-arginine biosynthesis I (via L-ornithine);; UMP biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; superpathway of pyrimidine ribonucleotides de novo biosynthesis;;
metacyc_pathway_type ARGININE-SYN; Super-Pathways;; UMP-Biosynthesis;; Super-Pathways;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF00988; PF00117; PF07722;
pfam_desc Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; Peptidase C26;
pfam_id CPSase_sm_chain; GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00988.22 evalue:3.8e-54 score:181.2 best_domain_score:175.8 name:CPSase_sm_chain; db:Pfam-A.hmm|PF00117.28 evalue:2.8e-45 score:153.7 best_domain_score:153.2 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:2.8e-09 score:36.3 best_domain_score:21.9 name:Peptidase_C26;
sprot_desc Carbamoyl-phosphate synthase small chain;
sprot_id sp|Q9CF80|CARA_LACLA;
sprot_target db:uniprot_sprot|sp|Q9CF80|CARA_LACLA 1 357 evalue:9.5e-147 qcov:98.30 identity:68.10;
tigrfam_acc TIGR01368;
tigrfam_desc carbamoyl-phosphate synthase, small subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name CPSaseIIsmall;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01368 evalue:3.3e-146 score:486.0 best_domain_score:485.8 name:TIGR01368;
179392 182571 CDS
ID metaerg.pl|00225
allec_ids 6.3.5.5;
allgo_ids GO:0005524; GO:0046872; GO:0004088; GO:0044205; GO:0006526;
allko_ids K01958; K00609; K01960; K01968; K11540; K01948; K01921; K01954; K01956; K01940; K14541; K01959; K01941; K01457; K01955; K01945; K01965; K11541; K01589; K13713;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190458.1 1 1059 evalue:0.0e+00 qcov:100.00 identity:90.40;
kegg_pathway_id 00473; 00910; 00791; 00620; 00330; 00252; 00220; 00251; 00640; 00550; 00280; 00230; 00240; 00020;
kegg_pathway_name D-Alanine metabolism; Nitrogen metabolism; Atrazine degradation; Pyruvate metabolism; Arginine and proline metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Glutamate metabolism; Propanoate metabolism; Peptidoglycan biosynthesis; Valine, leucine and isoleucine degradation; Purine metabolism; Pyrimidine metabolism; Citrate cycle (TCA cycle);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; PWY0-162; ARGSYN-PWY; PWY-5686; PRPP-PWY; PWY-5154;
metacyc_pathway_name L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; L-arginine biosynthesis I (via L-ornithine);; UMP biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; L-arginine biosynthesis III (via N-acetyl-L-citrulline);;
metacyc_pathway_type ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ARGININE-SYN; Super-Pathways;; UMP-Biosynthesis;; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF02222; PF02655; PF13535; PF15632; PF02786; PF02787; PF07478; PF01071; PF02142; PF08443;
pfam_desc ATP-grasp domain; ATP-grasp domain; ATP-grasp domain; ATP-grasp in the biosynthetic pathway with Ter operon; Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; D-ala D-ala ligase C-terminus; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; MGS-like domain; RimK-like ATP-grasp domain;
pfam_id ATP-grasp; ATP-grasp_3; ATP-grasp_4; ATPgrasp_Ter; CPSase_L_D2; CPSase_L_D3; Dala_Dala_lig_C; GARS_A; MGS; RimK;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:1.7e-17 score:62.8 best_domain_score:35.5 name:ATP-grasp; db:Pfam-A.hmm|PF02655.14 evalue:2e-19 score:69.4 best_domain_score:46.3 name:ATP-grasp_3; db:Pfam-A.hmm|PF13535.6 evalue:7.7e-09 score:34.6 best_domain_score:24.5 name:ATP-grasp_4; db:Pfam-A.hmm|PF15632.6 evalue:7.8e-17 score:60.5 best_domain_score:36.3 name:ATPgrasp_Ter; db:Pfam-A.hmm|PF02786.17 evalue:1.5e-118 score:393.1 best_domain_score:264.5 name:CPSase_L_D2; db:Pfam-A.hmm|PF02787.19 evalue:1e-39 score:134.9 best_domain_score:133.6 name:CPSase_L_D3; db:Pfam-A.hmm|PF07478.13 evalue:2.7e-20 score:72.0 best_domain_score:41.7 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF01071.19 evalue:1.5e-10 score:40.4 best_domain_score:27.8 name:GARS_A; db:Pfam-A.hmm|PF02142.22 evalue:2.6e-19 score:68.4 best_domain_score:64.7 name:MGS; db:Pfam-A.hmm|PF08443.11 evalue:2.4e-05 score:23.2 best_domain_score:11.2 name:RimK;
sprot_desc Carbamoyl-phosphate synthase large chain;
sprot_id sp|Q834E2|CARB_ENTFA;
sprot_target db:uniprot_sprot|sp|Q834E2|CARB_ENTFA 1 1059 evalue:0.0e+00 qcov:100.00 identity:74.30;
tigrfam_acc TIGR01369;
tigrfam_desc carbamoyl-phosphate synthase, large subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name CPSaseII_lrg;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01369 evalue:0 score:1551.1 best_domain_score:1551.0 name:TIGR01369;
182605 183531 CDS
ID metaerg.pl|00226
allec_ids 1.3.98.1; 1.3.-.-;
allgo_ids GO:0005737; GO:0016627; GO:0055114; GO:1990663; GO:0006207; GO:0044205;
allko_ids K00226;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848439.1 1 308 evalue:1.1e-133 qcov:100.00 identity:78.60;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5319; PWY-5140;
metacyc_pathway_name coumarin metabolism (to melilotic acid);; cannabinoid biosynthesis;;
metacyc_pathway_type COUMARIN-SYN; PHENYLPROPANOID-DERIVATIVE-DEG;; TERPENOPHENOLICS-SYN;;
pfam_acc PF01180; PF01207; PF00977; PF03060;
pfam_desc Dihydroorotate dehydrogenase; Dihydrouridine synthase (Dus); Histidine biosynthesis protein; Nitronate monooxygenase;
pfam_id DHO_dh; Dus; His_biosynth; NMO;
pfam_target db:Pfam-A.hmm|PF01180.21 evalue:4.3e-76 score:255.2 best_domain_score:255.0 name:DHO_dh; db:Pfam-A.hmm|PF01207.17 evalue:5e-15 score:54.6 best_domain_score:31.4 name:Dus; db:Pfam-A.hmm|PF00977.21 evalue:9.1e-09 score:34.3 best_domain_score:30.0 name:His_biosynth; db:Pfam-A.hmm|PF03060.15 evalue:1.3e-09 score:37.1 best_domain_score:36.5 name:NMO;
sprot_desc Dihydroorotate dehydrogenase A (fumarate);
sprot_id sp|Q5FJB5|PYRDA_LACAC;
sprot_target db:uniprot_sprot|sp|Q5FJB5|PYRDA_LACAC 1 302 evalue:1.7e-91 qcov:98.10 identity:56.10;
tigrfam_acc TIGR01037;
tigrfam_desc dihydroorotate dehydrogenase family protein;
tigrfam_name pyrD_sub1_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01037 evalue:3.9e-108 score:360.2 best_domain_score:359.9 name:TIGR01037;
183524 184237 CDS
ID metaerg.pl|00227
allec_ids 4.1.1.23;
allgo_ids GO:0004590; GO:0006207; GO:0005829; GO:0044205;
allko_ids K01591; K13421;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848438.1 1 237 evalue:1.8e-94 qcov:100.00 identity:74.30;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY0-162; PRPP-PWY; PWY-5686;
metacyc_pathway_name superpathway of pyrimidine ribonucleotides de novo biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;;
metacyc_pathway_type Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; Super-Pathways;; UMP-Biosynthesis;;
pfam_acc PF00215;
pfam_desc Orotidine 5'-phosphate decarboxylase / HUMPS family;
pfam_id OMPdecase;
pfam_target db:Pfam-A.hmm|PF00215.24 evalue:1.8e-42 score:144.7 best_domain_score:144.5 name:OMPdecase;
sprot_desc Orotidine 5'-phosphate decarboxylase;
sprot_id sp|P58641|PYRF_LISMO;
sprot_target db:uniprot_sprot|sp|P58641|PYRF_LISMO 3 233 evalue:1.4e-69 qcov:97.50 identity:57.60;
tigrfam_acc TIGR01740;
tigrfam_desc orotidine 5'-phosphate decarboxylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name pyrF;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01740 evalue:6.5e-57 score:191.8 best_domain_score:191.7 name:TIGR01740;
184238 184864 CDS
ID metaerg.pl|00228
allec_ids 2.4.2.10;
allgo_ids GO:0009116; GO:0000287; GO:0004588; GO:0044205;
allko_ids K01591; K02035; K13421; K00762;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190451.1 1 208 evalue:1.8e-90 qcov:100.00 identity:80.30;
kegg_pathway_id 02010; 00983; 00240;
kegg_pathway_name ABC transporters - General; Drug metabolism - other enzymes; Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PRPP-PWY; PWY-5686; PWY0-162;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;;
metacyc_pathway_type Super-Pathways;; UMP-Biosynthesis;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:3.8e-13 score:48.5 best_domain_score:48.1 name:Pribosyltran;
sprot_desc Orotate phosphoribosyltransferase;
sprot_id sp|P0DH75|PYRE_ENTFA;
sprot_target db:uniprot_sprot|sp|P0DH75|PYRE_ENTFA 7 207 evalue:1.2e-64 qcov:96.60 identity:60.20;
tigrfam_acc TIGR00336;
tigrfam_desc orotate phosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name pyrE;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00336 evalue:6.1e-40 score:136.0 best_domain_score:135.7 name:TIGR00336;
185001 185270 CDS
ID metaerg.pl|00229
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02956;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264966.1 1 89 evalue:1.2e-40 qcov:100.00 identity:98.90;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00312;
pfam_desc Ribosomal protein S15;
pfam_id Ribosomal_S15;
pfam_target db:Pfam-A.hmm|PF00312.22 evalue:3.7e-36 score:122.4 best_domain_score:122.3 name:Ribosomal_S15;
sprot_desc 30S ribosomal protein S15;
sprot_id sp|Q82ZJ1|RS15_ENTFA;
sprot_target db:uniprot_sprot|sp|Q82ZJ1|RS15_ENTFA 1 89 evalue:3.5e-34 qcov:100.00 identity:80.90;
tigrfam_acc TIGR00952;
tigrfam_desc ribosomal protein uS15;
tigrfam_mainrole Protein synthesis;
tigrfam_name S15_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00952 evalue:1.2e-37 score:127.2 best_domain_score:127.1 name:TIGR00952;
185494 187614 CDS
ID metaerg.pl|00230
allec_ids 2.7.7.8;
allgo_ids GO:0003723; GO:0005737; GO:0000287; GO:0004654; GO:0006402; GO:0006396;
allko_ids K12818; K00962;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264969.1 1 702 evalue:0.0e+00 qcov:99.40 identity:90.20;
kegg_pathway_id 00240; 00230;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00013; PF03726; PF01138; PF03725; PF00575;
pfam_desc KH domain; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; S1 RNA binding domain;
pfam_id KH_1; PNPase; RNase_PH; RNase_PH_C; S1;
pfam_target db:Pfam-A.hmm|PF00013.29 evalue:3.2e-12 score:45.3 best_domain_score:42.4 name:KH_1; db:Pfam-A.hmm|PF03726.14 evalue:5.4e-13 score:48.5 best_domain_score:48.5 name:PNPase; db:Pfam-A.hmm|PF01138.21 evalue:2.1e-38 score:131.0 best_domain_score:65.2 name:RNase_PH; db:Pfam-A.hmm|PF03725.15 evalue:3.4e-26 score:90.3 best_domain_score:57.7 name:RNase_PH_C; db:Pfam-A.hmm|PF00575.23 evalue:1e-18 score:66.7 best_domain_score:66.7 name:S1;
sprot_desc Polyribonucleotide nucleotidyltransferase;
sprot_id sp|Q82ZJ2|PNP_ENTFA;
sprot_target db:uniprot_sprot|sp|Q82ZJ2|PNP_ENTFA 1 705 evalue:1.4e-266 qcov:99.90 identity:68.70;
tigrfam_acc TIGR03591;
tigrfam_desc polyribonucleotide nucleotidyltransferase;
tigrfam_mainrole Transcription;
tigrfam_name polynuc_phos;
tigrfam_sub1role Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR03591 evalue:2.4e-304 score:1010.3 best_domain_score:1010.1 name:TIGR03591;
188655 187675 CDS
ID metaerg.pl|00231
allec_ids 6.3.4.15;
allgo_ids GO:0006464; GO:0017053; GO:0005524; GO:0000984; GO:0009374; GO:0004077; GO:0003677; GO:0042803; GO:0009102; GO:0006768; GO:0009305; GO:0006355;
allko_ids K03524;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190444.1 1 326 evalue:2.8e-82 qcov:100.00 identity:48.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY0-1264;
metacyc_pathway_name biotin-carboxyl carrier protein assembly;;
metacyc_pathway_type Lipid-Biosynthesis;;
pfam_acc PF03099;
pfam_desc Biotin/lipoate A/B protein ligase family;
pfam_id BPL_LplA_LipB;
pfam_target db:Pfam-A.hmm|PF03099.19 evalue:2.1e-15 score:56.0 best_domain_score:55.5 name:BPL_LplA_LipB;
sprot_desc Bifunctional ligase/repressor BirA;
sprot_id sp|P06709|BIRA_ECOLI;
sprot_target db:uniprot_sprot|sp|P06709|BIRA_ECOLI 85 320 evalue:1.9e-16 qcov:72.40 identity:25.60;
tigrfam_acc TIGR00121;
tigrfam_desc biotin--[acetyl-CoA-carboxylase] ligase;
tigrfam_mainrole Protein fate;
tigrfam_name birA_ligase;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00121 evalue:2e-42 score:144.5 best_domain_score:144.1 name:TIGR00121;
188826 190508 CDS
ID metaerg.pl|00232
allec_ids 3.1.-.-;
allgo_ids GO:0005737; GO:0004534; GO:0004521; GO:0003723; GO:0008270; GO:0006397; GO:0006364;
allko_ids K12574;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478858.1 1 560 evalue:1.4e-288 qcov:100.00 identity:89.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00753; PF12706; PF07521; PF17770;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain; Zn-dependent metallo-hydrolase RNA specificity domain; Ribonuclease J C-terminal domain;
pfam_id Lactamase_B; Lactamase_B_2; RMMBL; RNase_J_C;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:9e-12 score:44.6 best_domain_score:43.9 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:2.2e-08 score:33.1 best_domain_score:31.9 name:Lactamase_B_2; db:Pfam-A.hmm|PF07521.12 evalue:3.2e-11 score:42.2 best_domain_score:33.4 name:RMMBL; db:Pfam-A.hmm|PF17770.1 evalue:7.4e-27 score:93.4 best_domain_score:92.0 name:RNase_J_C;
sprot_desc Ribonuclease J 2;
sprot_id sp|Q8K7S6|RNJ2_STRP3;
sprot_target db:uniprot_sprot|sp|Q8K7S6|RNJ2_STRP3 1 552 evalue:4.7e-169 qcov:98.60 identity:53.40;
tigrfam_acc TIGR00649;
tigrfam_desc beta-CASP ribonuclease, RNase J family;
tigrfam_mainrole Transcription;
tigrfam_name MG423;
tigrfam_sub1role Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00649 evalue:2.2e-166 score:553.6 best_domain_score:553.5 name:TIGR00649;
190727 191293 CDS
ID metaerg.pl|00233
allgo_ids GO:0005886; GO:0015234; GO:0015888; GO:0016021;
allko_ids K16789;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478856.1 1 188 evalue:1.1e-80 qcov:100.00 identity:80.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF09515;
pfam_desc Thiamine transporter protein (Thia_YuaJ);
pfam_id Thia_YuaJ;
pfam_target db:Pfam-A.hmm|PF09515.10 evalue:4.3e-51 score:172.6 best_domain_score:172.5 name:Thia_YuaJ;
sprot_desc Thiamine transporter ThiT;
sprot_id sp|A2RI47|THIT_LACLM;
sprot_target db:uniprot_sprot|sp|A2RI47|THIT_LACLM 1 184 evalue:1.9e-18 qcov:97.90 identity:34.90;
tigrfam_acc TIGR02357;
tigrfam_desc energy-coupled thiamine transporter ThiT;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ECF_ThiT_YuaJ;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02357 evalue:1.8e-47 score:160.8 best_domain_score:160.6 name:TIGR02357;
tm_num 5;
190727 191293 transmembrane_helix
ID metaerg.pl|00234
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o190769-190837i190874-190933o190946-191014i191075-191143o191186-191254i;
191380 192834 CDS
ID metaerg.pl|00235
allec_ids 2.7.8.-;
allgo_ids GO:0003824; GO:0016021; GO:0005886; GO:0008808; GO:0032049;
allko_ids K06131;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478854.1 1 484 evalue:2.9e-245 qcov:100.00 identity:87.00;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PHOSLIPSYN-PWY; TEICHOICACID-PWY; PWY4FS-4; PHOSLIPSYN2-PWY; PWY-5668; PWY-6385;
metacyc_pathway_name superpathway of phospholipid biosynthesis I (bacteria);; poly(glycerol phosphate) wall teichoic acid biosynthesis;; phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; cardiolipin biosynthesis I;; peptidoglycan biosynthesis III (mycobacteria);;
metacyc_pathway_type Phospholipid-Biosynthesis; Super-Pathways;; Teichoic-Acids-Biosynthesis;; PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00614; PF13091; PF13396;
pfam_desc Phospholipase D Active site motif; PLD-like domain; Phospholipase_D-nuclease N-terminal;
pfam_id PLDc; PLDc_2; PLDc_N;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:8.1e-15 score:53.6 best_domain_score:27.9 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:1.7e-42 score:143.7 best_domain_score:93.7 name:PLDc_2; db:Pfam-A.hmm|PF13396.6 evalue:1.8e-11 score:43.0 best_domain_score:42.0 name:PLDc_N;
sprot_desc Cardiolipin synthase;
sprot_id sp|A0ALI7|CLS_LISW6;
sprot_target db:uniprot_sprot|sp|A0ALI7|CLS_LISW6 1 484 evalue:2.7e-149 qcov:100.00 identity:53.10;
tigrfam_acc TIGR04265;
tigrfam_desc cardiolipin synthase;
tigrfam_name bac_cardiolipin;
tigrfam_target db:TIGRFAMs.hmm|TIGR04265 evalue:4.3e-167 score:556.0 best_domain_score:555.8 name:TIGR04265;
tm_num 2;
191380 192834 transmembrane_helix
ID metaerg.pl|00236
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o191392-191451i191470-191538o;
193035 194489 CDS
ID metaerg.pl|00237
allec_ids 2.7.8.-;
allgo_ids GO:0003824; GO:0016021; GO:0005886; GO:0008808; GO:0032049;
allko_ids K06131;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091480444.1 1 484 evalue:2.7e-206 qcov:100.00 identity:74.20;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5668; PHOSLIPSYN2-PWY; PWY4FS-4; PWY-6385; PHOSLIPSYN-PWY; TEICHOICACID-PWY;
metacyc_pathway_name cardiolipin biosynthesis I;; superpathway of phospholipid biosynthesis II (plants);; phosphatidylcholine biosynthesis IV;; peptidoglycan biosynthesis III (mycobacteria);; superpathway of phospholipid biosynthesis I (bacteria);; poly(glycerol phosphate) wall teichoic acid biosynthesis;;
metacyc_pathway_type Cardiolipin-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylcholineBiosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; Teichoic-Acids-Biosynthesis;;
pfam_acc PF00614; PF13091; PF13396;
pfam_desc Phospholipase D Active site motif; PLD-like domain; Phospholipase_D-nuclease N-terminal;
pfam_id PLDc; PLDc_2; PLDc_N;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:1.1e-11 score:43.6 best_domain_score:22.9 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:3.1e-39 score:133.1 best_domain_score:85.1 name:PLDc_2; db:Pfam-A.hmm|PF13396.6 evalue:1.1e-08 score:34.1 best_domain_score:34.1 name:PLDc_N;
sprot_desc Cardiolipin synthase;
sprot_id sp|C1KYS0|CLS_LISMC;
sprot_target db:uniprot_sprot|sp|C1KYS0|CLS_LISMC 1 484 evalue:1.3e-130 qcov:100.00 identity:47.90;
tigrfam_acc TIGR04265;
tigrfam_desc cardiolipin synthase;
tigrfam_name bac_cardiolipin;
tigrfam_target db:TIGRFAMs.hmm|TIGR04265 evalue:4.6e-153 score:509.8 best_domain_score:509.6 name:TIGR04265;
tm_num 2;
193035 194489 transmembrane_helix
ID metaerg.pl|00238
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o193047-193106i193125-193193o;
194942 196108 CDS
ID metaerg.pl|00239
allec_ids 7.6.2.9;
allgo_ids GO:0005524; GO:0016020; GO:0016887; GO:0102908; GO:0031460;
allko_ids K02000; K10000; K02023; K02018; K02036; K01990; K10243; K11076; K01697; K10235; K05816; K01998; K10111; K10112; K02031; K02049; K01995; K02065; K02045; K11072; K02806; K00974; K06021; K06861; K00970; K02071; K01996; K02032; K00088; K02017; K11084; K02004; K02006; K02052; K02010; K05847; K01997; K02003;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190434.1 1 388 evalue:8.4e-195 qcov:100.00 identity:90.70;
kegg_pathway_id 00271; 00450; 02060; 00983; 02010; 00260; 00230;
kegg_pathway_name Methionine metabolism; Selenoamino acid metabolism; Phosphotransferase system (PTS); Drug metabolism - other enzymes; ABC transporters - General; Glycine, serine and threonine metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13304; PF00005; PF00571;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; CBS domain;
pfam_id AAA_21; ABC_tran; CBS;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:5.3e-07 score:29.0 best_domain_score:15.1 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.5e-35 score:121.9 best_domain_score:119.4 name:ABC_tran; db:Pfam-A.hmm|PF00571.28 evalue:4.6e-17 score:61.4 best_domain_score:32.9 name:CBS;
sprot_desc Carnitine transport ATP-binding protein OpuCA;
sprot_id sp|G2JZ44|OPUCA_LISM4;
sprot_target db:uniprot_sprot|sp|G2JZ44|OPUCA_LISM4 1 388 evalue:1.2e-123 qcov:100.00 identity:58.70;
tigrfam_acc TIGR01186;
tigrfam_desc glycine betaine/L-proline transport ATP binding subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name proV;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01186 evalue:3e-135 score:450.1 best_domain_score:449.9 name:TIGR01186;
196120 196752 CDS
ID metaerg.pl|00240
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K02001; K05846; K05845;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478851.1 1 210 evalue:1.5e-97 qcov:100.00 identity:89.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:2.6e-26 score:91.7 best_domain_score:91.7 name:BPD_transp_1;
sprot_desc Carnitine transport permease protein OpuCB;
sprot_id sp|G2JZ43|OPUCB_LISM4;
sprot_target db:uniprot_sprot|sp|G2JZ43|OPUCB_LISM4 1 205 evalue:2.8e-66 qcov:97.60 identity:63.40;
tm_num 5;
196120 196752 transmembrane_helix
ID metaerg.pl|00241
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o196177-196245i196264-196332o196342-196401i196549-196617o196645-196713i;
196770 197726 CDS
ID metaerg.pl|00242
allgo_ids GO:0022857; GO:0043190; GO:0055085;
allko_ids K05846; K05845;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190808.1 1 318 evalue:8.5e-153 qcov:100.00 identity:84.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF04069;
pfam_desc Substrate binding domain of ABC-type glycine betaine transport system;
pfam_id OpuAC;
pfam_target db:Pfam-A.hmm|PF04069.12 evalue:8.5e-48 score:162.4 best_domain_score:162.2 name:OpuAC;
sp YES;
sprot_desc Carnitine transport binding protein OpuCC;
sprot_id sp|G2JZ42|OPUCC_LISM4;
sprot_target db:uniprot_sprot|sp|G2JZ42|OPUCC_LISM4 12 306 evalue:1.4e-80 qcov:92.80 identity:49.20;
tm_num 1;
196770 196832 lipoprotein_signal_peptide
ID metaerg.pl|00243
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
196770 197726 transmembrane_helix
ID metaerg.pl|00244
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i196788-196856o;
197728 198417 CDS
ID metaerg.pl|00245
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K05845; K05846; K02001;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190429.1 1 228 evalue:3.2e-109 qcov:99.60 identity:93.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:9e-26 score:90.0 best_domain_score:89.2 name:BPD_transp_1;
sprot_desc Carnitine transport permease protein OpuCD;
sprot_id sp|G2JZ41|OPUCD_LISM4;
sprot_target db:uniprot_sprot|sp|G2JZ41|OPUCD_LISM4 13 229 evalue:9.5e-76 qcov:94.80 identity:65.40;
tm_num 4;
197728 198417 transmembrane_helix
ID metaerg.pl|00246
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i197839-197907o197986-198054i198208-198267o198310-198378i;
198777 198460 CDS
ID metaerg.pl|00247
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264989.1 1 105 evalue:1.1e-32 qcov:100.00 identity:71.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
198925 199794 CDS
ID metaerg.pl|00248
allgo_ids GO:0008289;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190425.1 1 289 evalue:1.1e-130 qcov:100.00 identity:80.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02645;
pfam_desc Uncharacterised protein, DegV family COG1307;
pfam_id DegV;
pfam_target db:Pfam-A.hmm|PF02645.16 evalue:2.6e-71 score:239.4 best_domain_score:239.3 name:DegV;
sprot_desc DegV domain-containing protein CPE0026;
sprot_id sp|Q8XPD7|Y026_CLOPE;
sprot_target db:uniprot_sprot|sp|Q8XPD7|Y026_CLOPE 3 289 evalue:2.2e-61 qcov:99.30 identity:40.80;
tigrfam_acc TIGR00762;
tigrfam_desc EDD domain protein, DegV family;
tigrfam_mainrole Unknown function;
tigrfam_name DegV;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00762 evalue:5.8e-82 score:274.2 best_domain_score:274.0 name:TIGR00762;
199995 200321 CDS
ID metaerg.pl|00249
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190422.1 1 108 evalue:1.3e-23 qcov:100.00 identity:61.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
200308 202263 CDS
ID metaerg.pl|00250
allgo_ids GO:0015078; GO:0033179; GO:0016021; GO:0005886; GO:0015991; GO:0006814;
allko_ids K02123;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478841.1 1 651 evalue:9.9e-281 qcov:100.00 identity:75.90;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01496;
pfam_desc V-type ATPase 116kDa subunit family;
pfam_id V_ATPase_I;
pfam_target db:Pfam-A.hmm|PF01496.19 evalue:1.7e-21 score:75.1 best_domain_score:41.3 name:V_ATPase_I;
sprot_desc V-type sodium ATPase subunit I;
sprot_id sp|P43439|NTPI_ENTHA;
sprot_target db:uniprot_sprot|sp|P43439|NTPI_ENTHA 1 645 evalue:2.7e-107 qcov:99.10 identity:36.50;
tm_num 8;
200308 202263 transmembrane_helix
ID metaerg.pl|00251
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o201436-201504i201538-201606o201649-201717i201751-201819o201829-201897i201916-201984o201997-202065i202078-202146o;
202306 202782 CDS
ID metaerg.pl|00252
allgo_ids GO:0015078; GO:0033177; GO:0016021; GO:0005886; GO:0033179; GO:0042802; GO:0015991; GO:0006814;
allko_ids K03661; K02128; K02155; K02124; K02110; K00872;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264998.1 1 158 evalue:1.3e-72 qcov:100.00 identity:96.80;
kegg_pathway_id 00260; 05012; 00190; 00195;
kegg_pathway_name Glycine, serine and threonine metabolism; Parkinson's disease; Oxidative phosphorylation; Photosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00137;
pfam_desc ATP synthase subunit C;
pfam_id ATP-synt_C;
pfam_target db:Pfam-A.hmm|PF00137.21 evalue:1.3e-27 score:95.1 best_domain_score:50.8 name:ATP-synt_C;
sprot_desc V-type sodium ATPase subunit K;
sprot_id sp|P43457|NTPK_ENTHA;
sprot_target db:uniprot_sprot|sp|P43457|NTPK_ENTHA 11 156 evalue:8.9e-41 qcov:92.40 identity:63.00;
tm_num 4;
202306 202782 transmembrane_helix
ID metaerg.pl|00253
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o202348-202416i202477-202545o202573-202641i202702-202770o;
202890 203468 CDS
ID metaerg.pl|00254
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265000.1 1 192 evalue:2.2e-55 qcov:100.00 identity:62.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
203483 204487 CDS
ID metaerg.pl|00255
allgo_ids GO:0006814;
allko_ids K02119;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190414.1 1 333 evalue:1.3e-156 qcov:99.70 identity:85.00;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01992;
pfam_desc ATP synthase (C/AC39) subunit;
pfam_id vATP-synt_AC39;
pfam_target db:Pfam-A.hmm|PF01992.16 evalue:1.4e-58 score:198.3 best_domain_score:198.1 name:vATP-synt_AC39;
sprot_desc V-type sodium ATPase subunit C;
sprot_id sp|P43456|NTPC_ENTHA;
sprot_target db:uniprot_sprot|sp|P43456|NTPC_ENTHA 6 332 evalue:4.0e-51 qcov:97.90 identity:36.90;
204477 204788 CDS
ID metaerg.pl|00256
allgo_ids GO:0034220; GO:0005524; GO:0046933; GO:0042777; GO:0006814;
allko_ids K02122;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478836.1 1 103 evalue:1.0e-46 qcov:100.00 identity:92.20;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01990;
pfam_desc ATP synthase (F/14-kDa) subunit;
pfam_id ATP-synt_F;
pfam_target db:Pfam-A.hmm|PF01990.17 evalue:3.4e-24 score:84.2 best_domain_score:84.1 name:ATP-synt_F;
sprot_desc V-type sodium ATPase subunit G;
sprot_id sp|P43455|NTPG_ENTHA;
sprot_target db:uniprot_sprot|sp|P43455|NTPG_ENTHA 1 103 evalue:2.1e-27 qcov:100.00 identity:57.30;
204801 206585 CDS
ID metaerg.pl|00257
allec_ids 7.2.2.1;
allgo_ids GO:0005524; GO:0046933; GO:0042777; GO:0006814;
allko_ids K02117;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478834.1 1 594 evalue:5.6e-307 qcov:100.00 identity:90.20;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00006; PF02874; PF16886;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta family, beta-barrel domain; ATPsynthase alpha/beta subunit N-term extension;
pfam_id ATP-synt_ab; ATP-synt_ab_N; ATP-synt_ab_Xtn;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:1.5e-94 score:314.8 best_domain_score:314.2 name:ATP-synt_ab; db:Pfam-A.hmm|PF02874.23 evalue:1.1e-10 score:41.2 best_domain_score:39.6 name:ATP-synt_ab_N; db:Pfam-A.hmm|PF16886.5 evalue:1.5e-44 score:150.0 best_domain_score:148.8 name:ATP-synt_ab_Xtn;
sprot_desc V-type sodium ATPase catalytic subunit A;
sprot_id sp|Q08636|NTPA_ENTHA;
sprot_target db:uniprot_sprot|sp|Q08636|NTPA_ENTHA 1 593 evalue:4.0e-251 qcov:99.80 identity:72.30;
206578 207954 CDS
ID metaerg.pl|00258
allgo_ids GO:0005524; GO:0046933; GO:0042777;
allko_ids K02118;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190408.1 1 458 evalue:7.2e-254 qcov:100.00 identity:96.70;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00006; PF02874;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta family, beta-barrel domain;
pfam_id ATP-synt_ab; ATP-synt_ab_N;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:2e-68 score:229.5 best_domain_score:229.1 name:ATP-synt_ab; db:Pfam-A.hmm|PF02874.23 evalue:1.9e-11 score:43.5 best_domain_score:43.2 name:ATP-synt_ab_N;
sprot_desc V-type ATP synthase beta chain;
sprot_id sp|Q0TPW8|VATB_CLOP1;
sprot_target db:uniprot_sprot|sp|Q0TPW8|VATB_CLOP1 1 458 evalue:2.3e-214 qcov:100.00 identity:80.10;
207960 208592 CDS
ID metaerg.pl|00259
allec_ids 3.6.3.14;
allgo_ids GO:0042626; GO:0005524; GO:0046933; GO:0042777; GO:0006814;
allko_ids K02120;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265010.1 1 209 evalue:2.6e-97 qcov:99.50 identity:90.90;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6126; PRPP-PWY;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF01813;
pfam_desc ATP synthase subunit D;
pfam_id ATP-synt_D;
pfam_target db:Pfam-A.hmm|PF01813.17 evalue:4.9e-55 score:185.6 best_domain_score:185.5 name:ATP-synt_D;
sprot_desc V-type sodium ATPase subunit D;
sprot_id sp|P43435|NTPD_ENTHA;
sprot_target db:uniprot_sprot|sp|P43435|NTPD_ENTHA 3 209 evalue:5.1e-68 qcov:98.60 identity:63.30;
tigrfam_acc TIGR00309;
tigrfam_desc V-type ATPase, D subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name V_ATPase_subD;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR00309 evalue:9.8e-49 score:164.9 best_domain_score:164.6 name:TIGR00309;
208713 210074 CDS
ID metaerg.pl|00260
allgo_ids GO:0006629;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190404.1 1 448 evalue:7.8e-168 qcov:98.90 identity:61.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01734;
pfam_desc Patatin-like phospholipase;
pfam_id Patatin;
pfam_target db:Pfam-A.hmm|PF01734.22 evalue:2.6e-24 score:85.8 best_domain_score:84.5 name:Patatin;
210167 210784 CDS
ID metaerg.pl|00261
allec_ids 2.7.4.8;
allgo_ids GO:0005737; GO:0005524; GO:0004385;
allko_ids K00942;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190402.1 1 205 evalue:5.8e-102 qcov:100.00 identity:92.20;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6125; PRPP-PWY; P1-PWY;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of guanosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; ;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; ;
pfam_acc PF00625;
pfam_desc Guanylate kinase;
pfam_id Guanylate_kin;
pfam_target db:Pfam-A.hmm|PF00625.21 evalue:3.2e-52 score:176.1 best_domain_score:175.8 name:Guanylate_kin;
sprot_desc Guanylate kinase;
sprot_id sp|Q82ZD5|KGUA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q82ZD5|KGUA_ENTFA 1 204 evalue:1.8e-73 qcov:99.50 identity:65.70;
tigrfam_acc TIGR03263;
tigrfam_desc guanylate kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name guanyl_kin;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR03263 evalue:8.3e-71 score:236.5 best_domain_score:236.2 name:TIGR03263;
210784 210996 CDS
ID metaerg.pl|00262
allec_ids 2.7.7.6;
allgo_ids GO:0003677; GO:0003899; GO:0006351;
allko_ids K03055; K03060;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265016.1 1 69 evalue:5.7e-25 qcov:98.60 identity:91.30;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01192;
pfam_desc RNA polymerase Rpb6;
pfam_id RNA_pol_Rpb6;
pfam_target db:Pfam-A.hmm|PF01192.22 evalue:9.5e-13 score:47.1 best_domain_score:46.9 name:RNA_pol_Rpb6;
sprot_desc DNA-directed RNA polymerase subunit omega;
sprot_id sp|Q03FY6|RPOZ_PEDPA;
sprot_target db:uniprot_sprot|sp|Q03FY6|RPOZ_PEDPA 1 66 evalue:6.3e-15 qcov:94.30 identity:59.10;
tigrfam_acc TIGR00690;
tigrfam_desc DNA-directed RNA polymerase, omega subunit;
tigrfam_mainrole Transcription;
tigrfam_name rpoZ;
tigrfam_sub1role DNA-dependent RNA polymerase;
tigrfam_target db:TIGRFAMs.hmm|TIGR00690 evalue:6e-15 score:54.2 best_domain_score:54.1 name:TIGR00690;
211148 212347 CDS
ID metaerg.pl|00263
allec_ids 4.1.1.36; 6.3.2.5; 4.1.1.36 6.3.2.5;
allgo_ids GO:0003824; GO:0010181; GO:0046872; GO:0004632; GO:0004633; GO:0015937; GO:0015941;
allko_ids K13038;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478825.1 1 399 evalue:6.9e-152 qcov:100.00 identity:67.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-4221; COA-PWY; PANTOSYN-PWY; PWY-4242;
metacyc_pathway_name superpathway of coenzyme A biosynthesis II (plants);; coenzyme A biosynthesis I (prokaryotic);; superpathway of coenzyme A biosynthesis I (bacteria);; ;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis;; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; ;
pfam_acc PF04127; PF02441;
pfam_desc DNA / pantothenate metabolism flavoprotein; Flavoprotein;
pfam_id DFP; Flavoprotein;
pfam_target db:Pfam-A.hmm|PF04127.15 evalue:2e-70 score:235.6 best_domain_score:235.6 name:DFP; db:Pfam-A.hmm|PF02441.19 evalue:1.9e-44 score:150.4 best_domain_score:149.8 name:Flavoprotein;
sprot_desc Probable coenzyme A biosynthesis bifunctional protein CoaBC;
sprot_id sp|O35033|COABC_BACSU;
sprot_target db:uniprot_sprot|sp|O35033|COABC_BACSU 1 391 evalue:1.1e-90 qcov:98.00 identity:47.70;
tigrfam_acc TIGR00521;
tigrfam_desc phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name coaBC_dfp;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00521 evalue:1.2e-139 score:464.9 best_domain_score:464.7 name:TIGR00521;
212361 214775 CDS
ID metaerg.pl|00264
allec_ids 3.6.4.-; 3.6.1.-;
allgo_ids GO:0003676; GO:0005524; GO:1990077; GO:0043140; GO:0003677; GO:0008270; GO:0006310; GO:0006270; GO:0006269; GO:0006268; GO:0006302;
allko_ids K05591; K10896; K04066;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190396.1 1 804 evalue:0.0e+00 qcov:100.00 identity:77.10;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5354; PWY-6404; FOLSYN-PWY; PWY-6383; ALL-CHORISMATE-PWY; PWY-6502; PWY-6147;
metacyc_pathway_name ; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of chorismate metabolism;; oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;;
metacyc_pathway_type ; Cell-Wall-Biosynthesis; Super-Pathways;; Folate-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Super-Pathways;; Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;;
pfam_acc PF00270; PF00271; PF17764; PF18074; PF18319; PF04851;
pfam_desc DEAD/DEAH box helicase; Helicase conserved C-terminal domain; 3′ DNA-binding domain (3′BD); Primosomal protein N C-terminal domain; PriA DNA helicase Cys-rich region (CRR) domain; Type III restriction enzyme, res subunit;
pfam_id DEAD; Helicase_C; PriA_3primeBD; PriA_C; PriA_CRR; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:1.6e-16 score:59.8 best_domain_score:58.0 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:8.4e-12 score:44.7 best_domain_score:33.2 name:Helicase_C; db:Pfam-A.hmm|PF17764.1 evalue:1.6e-22 score:78.4 best_domain_score:76.9 name:PriA_3primeBD; db:Pfam-A.hmm|PF18074.1 evalue:2e-18 score:66.2 best_domain_score:63.1 name:PriA_C; db:Pfam-A.hmm|PF18319.1 evalue:9.7e-11 score:40.7 best_domain_score:40.7 name:PriA_CRR; db:Pfam-A.hmm|PF04851.15 evalue:6.9e-21 score:74.2 best_domain_score:72.6 name:ResIII;
sprot_desc Primosomal protein N';
sprot_id sp|P94461|PRIA_BACSU;
sprot_target db:uniprot_sprot|sp|P94461|PRIA_BACSU 5 800 evalue:2.4e-230 qcov:99.00 identity:51.90;
tigrfam_acc TIGR00595;
tigrfam_desc primosomal protein N';
tigrfam_mainrole DNA metabolism;
tigrfam_name priA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00595 evalue:4e-207 score:688.0 best_domain_score:687.6 name:TIGR00595;
214789 215748 CDS
ID metaerg.pl|00265
allec_ids 2.1.2.9;
allgo_ids GO:0009058; GO:0016742; GO:0004479;
allko_ids K11788; K11787; K01933; K11175; K00604;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478821.1 1 314 evalue:1.8e-126 qcov:98.40 identity:74.20;
kegg_pathway_id 00230; 00970; 00670; 00271;
kegg_pathway_name Purine metabolism; Aminoacyl-tRNA biosynthesis; One carbon pool by folate; Methionine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02911; PF00551;
pfam_desc Formyl transferase, C-terminal domain; Formyl transferase;
pfam_id Formyl_trans_C; Formyl_trans_N;
pfam_target db:Pfam-A.hmm|PF02911.18 evalue:4.4e-31 score:106.3 best_domain_score:105.5 name:Formyl_trans_C; db:Pfam-A.hmm|PF00551.19 evalue:9.2e-44 score:148.6 best_domain_score:147.8 name:Formyl_trans_N;
sprot_desc Methionyl-tRNA formyltransferase;
sprot_id sp|Q82ZD8|FMT_ENTFA;
sprot_target db:uniprot_sprot|sp|Q82ZD8|FMT_ENTFA 1 314 evalue:1.3e-91 qcov:98.40 identity:53.80;
tigrfam_acc TIGR00460;
tigrfam_desc methionyl-tRNA formyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name fmt;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00460 evalue:1.1e-103 score:345.9 best_domain_score:345.7 name:TIGR00460;
215726 217084 CDS
ID metaerg.pl|00266
allec_ids 2.1.1.176;
allgo_ids GO:0001510; GO:0008168; GO:0009452; GO:0005829; GO:0003723; GO:0009383; GO:0006355; GO:0070475;
allko_ids K03500;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190806.1 5 451 evalue:2.0e-179 qcov:98.90 identity:70.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF09445; PF13847; PF01189; PF01029;
pfam_desc RNA cap guanine-N2 methyltransferase; Methyltransferase domain; 16S rRNA methyltransferase RsmB/F; NusB family;
pfam_id Methyltransf_15; Methyltransf_31; Methyltr_RsmB-F; NusB;
pfam_target db:Pfam-A.hmm|PF09445.10 evalue:1.3e-05 score:24.1 best_domain_score:23.2 name:Methyltransf_15; db:Pfam-A.hmm|PF13847.6 evalue:1.1e-07 score:30.9 best_domain_score:29.8 name:Methyltransf_31; db:Pfam-A.hmm|PF01189.17 evalue:4.8e-57 score:192.1 best_domain_score:191.4 name:Methyltr_RsmB-F; db:Pfam-A.hmm|PF01029.18 evalue:2.5e-33 score:114.4 best_domain_score:112.9 name:NusB;
sprot_desc Probable ribosomal RNA small subunit methyltransferase B;
sprot_id sp|P94464|RSMB_BACSU;
sprot_target db:uniprot_sprot|sp|P94464|RSMB_BACSU 9 447 evalue:1.5e-104 qcov:97.10 identity:45.50;
tigrfam_acc TIGR00563;
tigrfam_desc 16S rRNA (cytosine(967)-C(5))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name rsmB;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00563 evalue:1.1e-130 score:435.9 best_domain_score:435.7 name:TIGR00563;
217136 217894 CDS
ID metaerg.pl|00267
allec_ids 3.1.3.16;
allgo_ids GO:0003824; GO:0005737; GO:0046872; GO:0004722;
allko_ids K11915; K01090; K20074;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190392.1 1 252 evalue:2.1e-90 qcov:100.00 identity:65.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00481; PF13672; PF07228;
pfam_desc Protein phosphatase 2C; Protein phosphatase 2C; Stage II sporulation protein E (SpoIIE);
pfam_id PP2C; PP2C_2; SpoIIE;
pfam_target db:Pfam-A.hmm|PF00481.21 evalue:5.4e-10 score:38.6 best_domain_score:22.0 name:PP2C; db:Pfam-A.hmm|PF13672.6 evalue:8.9e-20 score:70.4 best_domain_score:70.0 name:PP2C_2; db:Pfam-A.hmm|PF07228.12 evalue:0.00016 score:20.9 best_domain_score:19.1 name:SpoIIE;
sprot_desc hypothetical protein;
sprot_id sp|Q04J42|PHPP_STRP2;
sprot_target db:uniprot_sprot|sp|Q04J42|PHPP_STRP2 12 240 evalue:5.6e-45 qcov:90.90 identity:42.40;
217898 219916 CDS
ID metaerg.pl|00268
allec_ids 2.7.11.1;
allgo_ids GO:0004672; GO:0005524; GO:0006468; GO:0016021; GO:0005886; GO:0042834; GO:0004674; GO:0071224; GO:0007165; GO:0009847;
allko_ids K05098; K05112; K08809; K04373; K08792; K06632; K03587; K08286; K08850; K01768; K02489; K13417; K08805; K04420; K06272; K04421; K04425; K08859; K04445; K07636; K05091; K13416; K02482; K02480; K05096; K07678; K08864; K12776; K05097; K12320; K11527; K08843; K12321; K03114; K04367; K04443; K08847; K01769; K01728; K04372; K08865; K05688; K05121; K13304; K13303; K12323; K02486; K13414; K11383; K08853; K12567; K12767; K04688; K02178; K08841; K07675; K07647; K13986; K03407; K13302; K00924; K04424; K07682; K05743; K02831; K07652; K04426; K07673; K11265; K12324; K08884; K12319; K12318; K05113; K06103; K08810; K07683; K07778; K04427; K11623; K06641; K04442; K05111; K05744; K08846; K05105; K04444; K11889; K08848; K06633; K08897; K11228; K02484; K08844; K11912; K08790; K08854; K02861; K13418; K08282; K08856; K05102; K08333; K05103; K13490; K08860; K08855; K12132;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478816.1 1 672 evalue:7.8e-273 qcov:100.00 identity:75.50;
kegg_pathway_id 02020; 04011; 04010; 04115; 00040; 04530; 00550; 04111; 00230; 04510; 05014; 04110; 04210; 05012; 04150; 04360; 04140; 04640; 04310;
kegg_pathway_name Two-component system - General; MAPK signaling pathway - yeast; MAPK signaling pathway; p53 signaling pathway; Pentose and glucuronate interconversions; Tight junction; Peptidoglycan biosynthesis; Cell cycle - yeast; Purine metabolism; Focal adhesion; Amyotrophic lateral sclerosis (ALS); Cell cycle; Apoptosis; Parkinson's disease; mTOR signaling pathway; Axon guidance; Regulation of autophagy; Hematopoietic cell lineage; Wnt signaling pathway;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF06293; PF03793; PF00069; PF07714; PF01163;
pfam_desc Lipopolysaccharide kinase (Kdo/WaaP) family; PASTA domain; Protein kinase domain; Protein tyrosine kinase; RIO1 family;
pfam_id Kdo; PASTA; Pkinase; Pkinase_Tyr; RIO1;
pfam_target db:Pfam-A.hmm|PF06293.14 evalue:2.1e-05 score:23.2 best_domain_score:22.3 name:Kdo; db:Pfam-A.hmm|PF03793.19 evalue:1.1e-40 score:136.5 best_domain_score:53.9 name:PASTA; db:Pfam-A.hmm|PF00069.25 evalue:4.2e-54 score:182.9 best_domain_score:182.4 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:1.6e-43 score:148.1 best_domain_score:147.7 name:Pkinase_Tyr; db:Pfam-A.hmm|PF01163.22 evalue:9.4e-06 score:24.6 best_domain_score:23.4 name:RIO1;
sprot_desc Serine/threonine-protein kinase PrkC;
sprot_id sp|O34507|PRKC_BACSU;
sprot_target db:uniprot_sprot|sp|O34507|PRKC_BACSU 1 672 evalue:1.0e-133 qcov:100.00 identity:39.80;
tm_num 1;
217898 219916 transmembrane_helix
ID metaerg.pl|00269
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i218900-218968o;
219932 220849 CDS
ID metaerg.pl|00270
allec_ids 3.6.1.-; 3.6.-.-;
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0046872; GO:0019843; GO:0042274;
allko_ids K06949;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190388.1 1 303 evalue:2.2e-129 qcov:99.30 identity:73.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6404; PWY-5354; PWY-6147; PWY-6502; ALL-CHORISMATE-PWY; PWY-6383; FOLSYN-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; oxidized GTP and dGTP detoxification;; superpathway of chorismate metabolism;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; ; 6-HM-Dihydropterin-PP-Biosynthesis;; Detoxification; Metabolic-Clusters;; Super-Pathways;; Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;;
pfam_acc PF01926; PF03193; PF16745;
pfam_desc 50S ribosome-binding GTPase; RsgA GTPase; RsgA N-terminal domain;
pfam_id MMR_HSR1; RsgA_GTPase; RsgA_N;
pfam_target db:Pfam-A.hmm|PF01926.23 evalue:2.5e-05 score:23.6 best_domain_score:21.9 name:MMR_HSR1; db:Pfam-A.hmm|PF03193.16 evalue:4.5e-53 score:178.8 best_domain_score:178.5 name:RsgA_GTPase; db:Pfam-A.hmm|PF16745.5 evalue:2.9e-21 score:74.2 best_domain_score:73.2 name:RsgA_N;
sprot_desc Small ribosomal subunit biogenesis GTPase RsgA;
sprot_id sp|Q82ZE1|RSGA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q82ZE1|RSGA_ENTFA 3 301 evalue:6.7e-85 qcov:98.00 identity:53.80;
tigrfam_acc TIGR00157;
tigrfam_desc ribosome small subunit-dependent GTPase A;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00157;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00157 evalue:1.6e-69 score:233.4 best_domain_score:233.2 name:TIGR00157;
220849 221499 CDS
ID metaerg.pl|00271
allec_ids 5.1.3.1;
allgo_ids GO:0005975; GO:0016857; GO:0005829; GO:0046872; GO:0004750; GO:0044262; GO:0019323; GO:0009052;
allko_ids K01783;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265036.1 1 216 evalue:1.9e-95 qcov:100.00 identity:79.60;
kegg_pathway_id 00710; 00030; 00040;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Pentose phosphate pathway; Pentose and glucuronate interconversions;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id P122-PWY; P21-PWY; PENTOSE-P-PWY; DARABCAT-PWY; CALVIN-PWY; PWY-5723; PHOTOALL-PWY; P185-PWY; NONOXIPENT-PWY; P124-PWY; PWY-1861; RIBITOLUTIL-PWY;
metacyc_pathway_name heterolactic fermentation;; pentose phosphate pathway (partial);; pentose phosphate pathway;; D-arabinose degradation II;; Calvin-Benson-Bassham cycle;; Rubisco shunt;; oxygenic photosynthesis;; formaldehyde assimilation III (dihydroxyacetone cycle);; pentose phosphate pathway (non-oxidative branch);; Bifidobacterium shunt;; formaldehyde assimilation II (assimilatory RuMP Cycle);; ribitol degradation;;
metacyc_pathway_type Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Pentose-Phosphate-Cycle;; Pentose-Phosphate-Cycle; Super-Pathways;; D-Arabinose-Degradation;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; Energy-Metabolism;; Photosynthesis; Super-Pathways;; Formaldehyde-Assimilation;; Pentose-Phosphate-Cycle;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; SUGAR-ALCOHOLS-DEG;;
pfam_acc PF00834;
pfam_desc Ribulose-phosphate 3 epimerase family;
pfam_id Ribul_P_3_epim;
pfam_target db:Pfam-A.hmm|PF00834.19 evalue:8.7e-82 score:272.5 best_domain_score:272.4 name:Ribul_P_3_epim;
sprot_desc Ribulose-phosphate 3-epimerase;
sprot_id sp|O34557|RPE_BACSU;
sprot_target db:uniprot_sprot|sp|O34557|RPE_BACSU 1 214 evalue:2.7e-64 qcov:99.10 identity:57.20;
tigrfam_acc TIGR01163;
tigrfam_desc ribulose-phosphate 3-epimerase;
tigrfam_mainrole Energy metabolism;
tigrfam_name rpe;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR01163 evalue:1.1e-88 score:295.3 best_domain_score:295.1 name:TIGR01163;
221500 222144 CDS
ID metaerg.pl|00272
allec_ids 2.7.6.2;
allgo_ids GO:0009229; GO:0030975; GO:0005524; GO:0016301; GO:0004788; GO:0006772;
allko_ids K00949;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265038.1 1 214 evalue:1.3e-85 qcov:100.00 identity:70.10;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id THISYNARA-PWY;
metacyc_pathway_name superpathway of thiamine diphosphate biosynthesis III (eukaryotes);;
metacyc_pathway_type Super-Pathways; Thiamine-Biosynthesis;;
pfam_acc PF04265; PF04263;
pfam_desc Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain;
pfam_id TPK_B1_binding; TPK_catalytic;
pfam_target db:Pfam-A.hmm|PF04265.14 evalue:4.2e-08 score:32.0 best_domain_score:31.3 name:TPK_B1_binding; db:Pfam-A.hmm|PF04263.16 evalue:3.9e-18 score:64.9 best_domain_score:64.2 name:TPK_catalytic;
sprot_desc Thiamine pyrophosphokinase;
sprot_id sp|O34664|THIN_BACSU;
sprot_target db:uniprot_sprot|sp|O34664|THIN_BACSU 1 214 evalue:3.2e-25 qcov:100.00 identity:34.40;
tigrfam_acc TIGR01378;
tigrfam_desc thiamine pyrophosphokinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name thi_PPkinase;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR01378 evalue:2e-47 score:160.5 best_domain_score:160.3 name:TIGR01378;
222437 222808 CDS
ID metaerg.pl|00273
allgo_ids GO:0035438;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478810.1 3 123 evalue:6.4e-48 qcov:98.40 identity:78.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF07238;
pfam_desc PilZ domain;
pfam_id PilZ;
pfam_target db:Pfam-A.hmm|PF07238.14 evalue:5.4e-15 score:54.8 best_domain_score:54.6 name:PilZ;
223314 223021 CDS
ID metaerg.pl|00274
allgo_ids GO:0003735;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00830;
pfam_desc Ribosomal L28 family;
pfam_id Ribosomal_L28;
pfam_target db:Pfam-A.hmm|PF00830.19 evalue:2.6e-20 score:71.6 best_domain_score:71.3 name:Ribosomal_L28;
tigrfam_acc TIGR00009;
tigrfam_desc ribosomal protein bL28;
tigrfam_mainrole Protein synthesis;
tigrfam_name L28;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00009 evalue:1.4e-22 score:79.1 best_domain_score:78.8 name:TIGR00009;
223598 223963 CDS
ID metaerg.pl|00275
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478809.1 1 121 evalue:1.2e-51 qcov:100.00 identity:87.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF03780;
pfam_desc Asp23 family, cell envelope-related function;
pfam_id Asp23;
pfam_target db:Pfam-A.hmm|PF03780.13 evalue:1e-32 score:112.0 best_domain_score:111.8 name:Asp23;
sprot_desc hypothetical protein;
sprot_id sp|O34318|YLOU_BACSU;
sprot_target db:uniprot_sprot|sp|O34318|YLOU_BACSU 1 119 evalue:4.0e-33 qcov:98.30 identity:55.50;
224009 225658 CDS
ID metaerg.pl|00276
allgo_ids GO:0004371; GO:0006071;
allko_ids K07030;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478807.1 1 549 evalue:7.3e-261 qcov:100.00 identity:84.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13684; PF02734;
pfam_desc Dihydroxyacetone kinase family; DAK2 domain;
pfam_id Dak1_2; Dak2;
pfam_target db:Pfam-A.hmm|PF13684.6 evalue:8.8e-125 score:415.1 best_domain_score:415.1 name:Dak1_2; db:Pfam-A.hmm|PF02734.17 evalue:4.7e-43 score:146.3 best_domain_score:145.2 name:Dak2;
sprot_desc hypothetical protein;
sprot_id sp|Q49X07|Y1546_STAS1;
sprot_target db:uniprot_sprot|sp|Q49X07|Y1546_STAS1 3 549 evalue:6.7e-160 qcov:99.60 identity:52.60;
tigrfam_acc TIGR03599;
tigrfam_desc DAK2 domain fusion protein YloV;
tigrfam_name YloV;
tigrfam_target db:TIGRFAMs.hmm|TIGR03599 evalue:6.5e-213 score:707.2 best_domain_score:707.0 name:TIGR03599;
225740 227782 CDS
ID metaerg.pl|00277
allec_ids 3.6.4.12;
allgo_ids GO:0003676; GO:0005524; GO:0004003; GO:0003677; GO:0006310; GO:0006281;
allko_ids K10896; K05592; K05591; K03655;
casgene_acc cd09639_cas3_CAS-I;
casgene_name cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:3.6e-09 score:35.4 best_domain_score:28.7 name:cas3;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190378.1 1 680 evalue:5.5e-282 qcov:100.00 identity:72.10;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00270; PF00271; PF17191; PF04851;
pfam_desc DEAD/DEAH box helicase; Helicase conserved C-terminal domain; RecG wedge domain; Type III restriction enzyme, res subunit;
pfam_id DEAD; Helicase_C; RecG_wedge; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:1.9e-16 score:59.5 best_domain_score:59.4 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:3.2e-25 score:87.9 best_domain_score:68.3 name:Helicase_C; db:Pfam-A.hmm|PF17191.4 evalue:2.8e-13 score:49.1 best_domain_score:47.6 name:RecG_wedge; db:Pfam-A.hmm|PF04851.15 evalue:7.5e-15 score:54.6 best_domain_score:53.6 name:ResIII;
sprot_desc ATP-dependent DNA helicase RecG;
sprot_id sp|O34942|RECG_BACSU;
sprot_target db:uniprot_sprot|sp|O34942|RECG_BACSU 1 668 evalue:1.2e-187 qcov:98.20 identity:49.90;
tigrfam_acc TIGR00643;
tigrfam_desc ATP-dependent DNA helicase RecG;
tigrfam_mainrole DNA metabolism;
tigrfam_name recG;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00643 evalue:4.7e-229 score:761.4 best_domain_score:761.2 name:TIGR00643;
227807 228814 CDS
ID metaerg.pl|00278
allec_ids 2.3.1.274;
allgo_ids GO:0003824; GO:0006633; GO:0016747; GO:0005737; GO:0043811; GO:0008654;
allko_ids K03621;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190375.1 1 330 evalue:5.6e-155 qcov:98.50 identity:86.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02504;
pfam_desc Fatty acid synthesis protein;
pfam_id FA_synthesis;
pfam_target db:Pfam-A.hmm|PF02504.15 evalue:1.8e-107 score:358.4 best_domain_score:358.2 name:FA_synthesis;
sprot_desc Phosphate acyltransferase;
sprot_id sp|Q82ZE8|PLSX_ENTFA;
sprot_target db:uniprot_sprot|sp|Q82ZE8|PLSX_ENTFA 1 334 evalue:9.8e-106 qcov:99.70 identity:57.50;
tigrfam_acc TIGR00182;
tigrfam_desc fatty acid/phospholipid synthesis protein PlsX;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name plsX;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00182 evalue:3.5e-112 score:374.0 best_domain_score:373.9 name:TIGR00182;
228973 229212 CDS
ID metaerg.pl|00279
allgo_ids GO:0005737; GO:0000036;
allko_ids K01586; K05939; K01909; K03955; K01897; K02078;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265052.1 1 79 evalue:1.3e-30 qcov:100.00 identity:89.90;
kegg_pathway_id 00564; 00071; 05012; 00300; 00190;
kegg_pathway_name Glycerophospholipid metabolism; Fatty acid metabolism; Parkinson's disease; Lysine biosynthesis; Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00550;
pfam_desc Phosphopantetheine attachment site;
pfam_id PP-binding;
pfam_target db:Pfam-A.hmm|PF00550.25 evalue:6.1e-18 score:64.2 best_domain_score:64.0 name:PP-binding;
sprot_desc Acyl carrier protein;
sprot_id sp|Q5HPV9|ACP_STAEQ;
sprot_target db:uniprot_sprot|sp|Q5HPV9|ACP_STAEQ 5 77 evalue:6.1e-22 qcov:92.40 identity:72.60;
tigrfam_acc TIGR00517;
tigrfam_desc acyl carrier protein;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name acyl_carrier;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00517 evalue:3.2e-33 score:112.6 best_domain_score:112.5 name:TIGR00517;
229430 230434 CDS
ID metaerg.pl|00280
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015031;
allko_ids K02000; K02023; K05816; K10111; K02031; K02049; K01995; K02045; K02071; K06861; K01996; K02032; K02034; K02017; K13896; K12371; K02052; K02006; K02010; K05847;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034299229.1 1 334 evalue:1.9e-182 qcov:100.00 identity:95.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13304; PF00005; PF08352;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id AAA_21; ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:6.9e-08 score:31.9 best_domain_score:24.3 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:7.4e-31 score:106.7 best_domain_score:106.2 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:5.7e-16 score:58.0 best_domain_score:56.5 name:oligo_HPY;
sprot_desc Oligopeptide transport ATP-binding protein OppD;
sprot_id sp|P50980|OPPD_LACLS;
sprot_target db:uniprot_sprot|sp|P50980|OPPD_LACLS 6 333 evalue:8.1e-92 qcov:98.20 identity:53.80;
tigrfam_acc TIGR01727;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name oligo_HPY;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:1.2e-22 score:79.0 best_domain_score:77.9 name:TIGR01727;
230436 231428 CDS
ID metaerg.pl|00281
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0015031;
allko_ids K02023; K02000; K02049; K01995; K10112; K10111; K01998; K02031; K05816; K01996; K06861; K02071; K11072; K02045; K05847; K02010; K01997; K02052; K02006; K13896; K02032;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190369.1 1 330 evalue:2.4e-174 qcov:100.00 identity:93.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00005; PF08352;
pfam_desc ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:7.5e-30 score:103.5 best_domain_score:102.8 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:2.5e-07 score:30.3 best_domain_score:29.2 name:oligo_HPY;
sprot_desc Oligopeptide transport ATP-binding protein OppF;
sprot_id sp|P0A2V4|OPPF_LACLA;
sprot_target db:uniprot_sprot|sp|P0A2V4|OPPF_LACLA 4 310 evalue:3.1e-96 qcov:93.00 identity:55.70;
231430 232389 CDS
ID metaerg.pl|00282
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015031;
allko_ids K02033; K13894;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478797.1 1 319 evalue:1.1e-163 qcov:100.00 identity:92.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.8e-37 score:128.1 best_domain_score:128.1 name:BPD_transp_1;
sprot_desc Oligopeptide transport system permease protein OppB;
sprot_id sp|P0A4N7|OPPB_LACLA;
sprot_target db:uniprot_sprot|sp|P0A4N7|OPPB_LACLA 1 318 evalue:1.2e-87 qcov:99.70 identity:51.30;
tm_num 6;
231430 232389 transmembrane_helix
ID metaerg.pl|00283
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i231454-231522o231721-231789i231826-231894o231976-232044i232159-232227o232285-232353i;
232426 233373 CDS
ID metaerg.pl|00284
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015031;
allko_ids K02034;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_051503639.1 1 315 evalue:9.7e-149 qcov:100.00 identity:91.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:2.3e-23 score:82.1 best_domain_score:82.1 name:BPD_transp_1;
sprot_desc Oligopeptide transport system permease protein OppC;
sprot_id sp|P0A4P0|OPPC_LACLS;
sprot_target db:uniprot_sprot|sp|P0A4P0|OPPC_LACLS 25 312 evalue:5.1e-64 qcov:91.40 identity:45.10;
tm_num 6;
232426 233373 transmembrane_helix
ID metaerg.pl|00285
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i232534-232602o232762-232830i232867-232926o232936-232989i233113-233181o233260-233328i;
233392 235287 CDS
ID metaerg.pl|00286
allgo_ids GO:0043190; GO:0030288; GO:1904680; GO:0030420; GO:0015031; GO:0030435;
allko_ids K02035;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190365.1 1 631 evalue:0.0e+00 qcov:100.00 identity:87.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:1.6e-71 score:240.5 best_domain_score:240.0 name:SBP_bac_5;
sp YES;
sprot_desc Oligopeptide-binding protein AppA;
sprot_id sp|P42061|APPA_BACSU;
sprot_target db:uniprot_sprot|sp|P42061|APPA_BACSU 78 623 evalue:4.7e-32 qcov:86.50 identity:21.70;
233392 233457 lipoprotein_signal_peptide
ID metaerg.pl|00287
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
235494 236585 CDS
ID metaerg.pl|00288
allgo_ids GO:0016021; GO:0005886;
allko_ids K02004; K09813;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478794.1 1 362 evalue:1.5e-156 qcov:99.70 identity:81.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
sprot_desc Putative hemin transport system permease protein HrtB;
sprot_id sp|Q8CRA9|HRTB_STAES;
sprot_target db:uniprot_sprot|sp|Q8CRA9|HRTB_STAES 1 362 evalue:1.4e-20 qcov:99.70 identity:23.80;
tm_num 4;
235494 236585 transmembrane_helix
ID metaerg.pl|00289
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i235530-235598o236232-236300i236379-236447o236475-236543i;
236597 237265 CDS
ID metaerg.pl|00290
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887;
allko_ids K02031; K10111; K10112; K02065; K01995; K02049; K05816; K10235; K02013; K02018; K02023; K01990; K11962; K02000; K02006; K02052; K02004; K02003; K05847; K02010; K02017; K02032; K01996; K02071; K06861; K11072; K02045; K09814;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478792.1 1 222 evalue:4.5e-100 qcov:100.00 identity:85.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6188; PWY-6166; PWY-6171; PWY-6135; PWY-6113; PWYG-321;
metacyc_pathway_name ; ; ; ; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.9e-11 score:43.5 best_domain_score:22.3 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.5e-31 score:109.0 best_domain_score:108.5 name:ABC_tran;
sprot_desc Putative hemin import ATP-binding protein HrtA;
sprot_id sp|Q49ZT6|HRTA_STAS1;
sprot_target db:uniprot_sprot|sp|Q49ZT6|HRTA_STAS1 4 219 evalue:5.4e-44 qcov:97.30 identity:44.30;
237282 238772 CDS
ID metaerg.pl|00291
allec_ids 1.3.8.-; 1.14.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0016117; GO:0009405;
allko_ids K03388; K10209;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265069.1 1 496 evalue:9.9e-265 qcov:100.00 identity:90.10;
kegg_pathway_id 00790; 00906;
kegg_pathway_name Folate biosynthesis; Carotenoid biosynthesis - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5987; PWY-5175; PWY-5366; 4TOLCARBDEG-PWY; PWY-5397; CAROTENOID-PWY; PWY-6475; TOLSULFDEG-PWY; PWY-5288; PWY-5942; PWY-5947; PWY-5367; PWY-5362; PWY-762; PWY-6287; PWY-5944; PWY-782;
metacyc_pathway_name sorgoleone biosynthesis;; lactucaxanthin biosynthesis;; palmitoleate biosynthesis II (plants and bacteria);; 4-toluenecarboxylate degradation;; crocetin biosynthesis;; superpathway of carotenoid biosynthesis in plants;; trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria);; 4-toluenesulfonate degradation I;; astaxanthin biosynthesis (bacteria, fungi, algae);; trans-lycopene biosynthesis I;; lutein biosynthesis;; petroselinate biosynthesis;; sapienate biosynthesis;; phospholipid desaturation;; neurosporene biosynthesis;; zeaxanthin biosynthesis;; glycolipid desaturation;;
metacyc_pathway_type QUINONE-SYN;; C40-Carotenoids-Biosynthesis;; Palmitoleate-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; APOCAROTENOID-SYN;; C40-Carotenoids-Biosynthesis; Super-Pathways;; Lycopene-Biosynthesis;; 4-Toluenesulfonate-Degradation;; C40-Carotenoids-Biosynthesis;; Lycopene-Biosynthesis; Super-Pathways;; C40-Carotenoids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Phospholipid-Biosynthesis;; C40-Carotenoids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Glycolipids-Biosynthesis;;
pfam_acc PF01593; PF01266; PF00890; PF03486; PF13450;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; HI0933-like protein; NAD(P)-binding Rossmann-like domain;
pfam_id Amino_oxidase; DAO; FAD_binding_2; HI0933_like; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:2.4e-32 score:112.1 best_domain_score:111.8 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:9.1e-08 score:31.3 best_domain_score:22.8 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.2e-06 score:27.1 best_domain_score:26.0 name:FAD_binding_2; db:Pfam-A.hmm|PF03486.14 evalue:5.1e-06 score:24.7 best_domain_score:22.8 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:5e-14 score:51.5 best_domain_score:50.5 name:NAD_binding_8;
sp YES;
sprot_desc 4,4'-diapophytoene desaturase (4,4'-diaponeurosporene-forming);
sprot_id sp|Q4L975|CRTN_STAHJ;
sprot_target db:uniprot_sprot|sp|Q4L975|CRTN_STAHJ 5 494 evalue:1.8e-135 qcov:98.80 identity:46.80;
tigrfam_acc TIGR02734;
tigrfam_desc phytoene desaturase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name crtI_fam;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02734 evalue:2.3e-131 score:438.1 best_domain_score:437.9 name:TIGR02734;
237282 237335 signal_peptide
ID metaerg.pl|00292
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
239737 238925 CDS
ID metaerg.pl|00293
allec_ids 3.1.3.104;
allgo_ids GO:0005829; GO:0000287; GO:0016791; GO:0009231;
allko_ids K21064;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195524.1 1 270 evalue:8.4e-125 qcov:100.00 identity:79.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF08282; PF05116;
pfam_desc haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase;
pfam_id Hydrolase_3; S6PP;
pfam_target db:Pfam-A.hmm|PF08282.12 evalue:1.2e-55 score:188.3 best_domain_score:188.1 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:4.5e-11 score:42.0 best_domain_score:22.8 name:S6PP;
sprot_desc 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YitU;
sprot_id sp|P70947|YITU_BACSU;
sprot_target db:uniprot_sprot|sp|P70947|YITU_BACSU 5 270 evalue:2.9e-47 qcov:98.50 identity:40.10;
tigrfam_acc TIGR00099; TIGR01484;
tigrfam_desc Cof-like hydrolase; HAD hydrolase, family IIB;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name Cof-subfamily; HAD-SF-IIB;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00099 evalue:1.7e-51 score:174.4 best_domain_score:174.3 name:TIGR00099; db:TIGRFAMs.hmm|TIGR01484 evalue:4.9e-27 score:94.6 best_domain_score:47.4 name:TIGR01484;
239911 240252 CDS
ID metaerg.pl|00294
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195521.1 1 113 evalue:2.0e-51 qcov:100.00 identity:88.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01883;
pfam_desc Iron-sulfur cluster assembly protein;
pfam_id FeS_assembly_P;
pfam_target db:Pfam-A.hmm|PF01883.19 evalue:9.5e-20 score:69.8 best_domain_score:69.5 name:FeS_assembly_P;
sprot_desc Fe-S protein maturation auxiliary factor YitW;
sprot_id sp|P70949|SUFT_BACSU;
sprot_target db:uniprot_sprot|sp|P70949|SUFT_BACSU 14 113 evalue:1.7e-25 qcov:88.50 identity:53.00;
240348 243662 CDS
ID metaerg.pl|00295
allec_ids 2.7.7.7;
allgo_ids GO:0006260; GO:0008408; GO:0005737; GO:0003887; GO:0003676;
allko_ids K14162; K02323; K02337; K03763;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195518.1 1 1100 evalue:0.0e+00 qcov:99.60 identity:60.00;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF07733; PF17657; PF14579; PF02811; PF01336;
pfam_desc Bacterial DNA polymerase III alpha NTPase domain; Bacterial DNA polymerase III alpha subunit finger domain; Helix-hairpin-helix motif; PHP domain; OB-fold nucleic acid binding domain;
pfam_id DNA_pol3_alpha; DNA_pol3_finger; HHH_6; PHP; tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF07733.12 evalue:2.5e-98 score:328.1 best_domain_score:325.8 name:DNA_pol3_alpha; db:Pfam-A.hmm|PF17657.1 evalue:7.4e-58 score:193.8 best_domain_score:192.5 name:DNA_pol3_finger; db:Pfam-A.hmm|PF14579.6 evalue:7.6e-17 score:60.6 best_domain_score:58.9 name:HHH_6; db:Pfam-A.hmm|PF02811.19 evalue:1.3e-23 score:83.4 best_domain_score:80.6 name:PHP; db:Pfam-A.hmm|PF01336.25 evalue:8.9e-07 score:28.1 best_domain_score:26.8 name:tRNA_anti-codon;
sprot_desc DNA polymerase III subunit alpha;
sprot_id sp|O34623|DPO3A_BACSU;
sprot_target db:uniprot_sprot|sp|O34623|DPO3A_BACSU 1 1100 evalue:7.0e-225 qcov:99.60 identity:41.00;
tigrfam_acc TIGR00594;
tigrfam_desc DNA polymerase III, alpha subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name polc;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00594 evalue:1.8e-291 score:969.0 best_domain_score:968.7 name:TIGR00594;
243856 244818 CDS
ID metaerg.pl|00296
allec_ids 2.7.1.11;
allgo_ids GO:0003872; GO:0006096; GO:0005737; GO:0005524; GO:0046872; GO:0006002;
allko_ids K00895; K00850;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478784.1 1 320 evalue:2.6e-173 qcov:100.00 identity:94.70;
kegg_pathway_id 00030; 00051; 00010; 00052;
kegg_pathway_name Pentose phosphate pathway; Fructose and mannose metabolism; Glycolysis / Gluconeogenesis; Galactose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id GLYCOLYSIS; GLYCOLYSIS-E-D; PWY-5484; P461-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAGLYCOLYSIS-PWY; PWY-1861; PWY-5464; P441-PWY; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY;
metacyc_pathway_name glycolysis I (from glucose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis III (from glucose);; formaldehyde assimilation II (assimilatory RuMP Cycle);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of N-acetylneuraminate degradation;; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;;
metacyc_pathway_type GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Formaldehyde-Assimilation;; Energy-Metabolism; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;;
pfam_acc PF00365;
pfam_desc Phosphofructokinase;
pfam_id PFK;
pfam_target db:Pfam-A.hmm|PF00365.20 evalue:3.9e-109 score:363.6 best_domain_score:363.3 name:PFK;
sprot_desc ATP-dependent 6-phosphofructokinase;
sprot_id sp|Q836R3|PFKA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q836R3|PFKA_ENTFA 1 319 evalue:1.2e-140 qcov:99.70 identity:74.60;
tigrfam_acc TIGR02482;
tigrfam_desc 6-phosphofructokinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name PFKA_ATP;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR02482 evalue:1.9e-129 score:430.1 best_domain_score:429.9 name:TIGR02482;
244897 246654 CDS
ID metaerg.pl|00297
allec_ids 2.7.1.40;
allgo_ids GO:0003824; GO:0005524; GO:0016301; GO:0000287; GO:0030955; GO:0004743;
allko_ids K01007; K08484; K12406; K00873; K08483;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195512.1 1 585 evalue:1.2e-309 qcov:100.00 identity:96.20;
kegg_pathway_id 00230; 00710; 00010; 00620; 00720; 02060;
kegg_pathway_name Purine metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Pyruvate metabolism; Reductive carboxylate cycle (CO2 fixation); Phosphotransferase system (PTS);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5484; P461-PWY; P341-PWY; PWY-6142; FERMENTATION-PWY; P441-PWY; PWY-5723; PWY-1042; ANAEROFRUCAT-PWY; PWY-3801; PWY-5464; ANAGLYCOLYSIS-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; GLYCOLYSIS-E-D; PWY-6146; P122-PWY; ANARESP1-PWY; GLYCOLYSIS; PWY-2221; P124-PWY; NPGLUCAT-PWY;
metacyc_pathway_name glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis V (Pyrococcus);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; mixed acid fermentation;; superpathway of N-acetylneuraminate degradation;; Rubisco shunt;; glycolysis IV (plant cytosol);; homolactic fermentation;; sucrose degradation II (sucrose synthase);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; superpathway of glycolysis and the Entner-Doudoroff pathway;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; heterolactic fermentation;; ; glycolysis I (from glucose 6-phosphate);; Entner-Doudoroff pathway III (semi-phosphorylative);; Bifidobacterium shunt;; Entner-Doudoroff pathway II (non-phosphorylative);;
metacyc_pathway_type GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis; Super-Pathways;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; CARBOXYLATES-DEG; Super-Pathways;; Energy-Metabolism;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; SUCROSE-DEG;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Biosynthesis; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; ; GLYCOLYSIS-VARIANTS;; Entner-Duodoroff-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Entner-Duodoroff-Pathways;;
pfam_acc PF03328; PF00391; PF00224; PF02887;
pfam_desc HpcH/HpaI aldolase/citrate lyase family; PEP-utilising enzyme, mobile domain; Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain;
pfam_id HpcH_HpaI; PEP-utilizers; PK; PK_C;
pfam_target db:Pfam-A.hmm|PF03328.14 evalue:3.9e-05 score:22.1 best_domain_score:20.7 name:HpcH_HpaI; db:Pfam-A.hmm|PF00391.23 evalue:1.9e-21 score:74.8 best_domain_score:72.8 name:PEP-utilizers; db:Pfam-A.hmm|PF00224.21 evalue:1.1e-150 score:500.5 best_domain_score:499.9 name:PK; db:Pfam-A.hmm|PF02887.16 evalue:1.1e-34 score:118.4 best_domain_score:117.6 name:PK_C;
sprot_desc Pyruvate kinase;
sprot_id sp|Q02499|KPYK_GEOSE;
sprot_target db:uniprot_sprot|sp|Q02499|KPYK_GEOSE 2 585 evalue:1.0e-203 qcov:99.80 identity:62.40;
tigrfam_acc TIGR01064;
tigrfam_desc pyruvate kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name pyruv_kin;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01064 evalue:1.5e-182 score:606.5 best_domain_score:606.1 name:TIGR01064;
246795 247667 CDS
ID metaerg.pl|00298
allgo_ids GO:0003676;
allko_ids K00243;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091266817.1 1 288 evalue:1.1e-127 qcov:99.30 identity:75.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF17783; PF13509;
pfam_desc CvfB-like winged helix domain; S1 domain;
pfam_id CvfB_WH; S1_2;
pfam_target db:Pfam-A.hmm|PF17783.1 evalue:6.2e-20 score:70.0 best_domain_score:69.2 name:CvfB_WH; db:Pfam-A.hmm|PF13509.6 evalue:9.9e-07 score:28.0 best_domain_score:22.1 name:S1_2;
sprot_desc hypothetical protein;
sprot_id sp|O06747|YITL_BACSU;
sprot_target db:uniprot_sprot|sp|O06747|YITL_BACSU 37 280 evalue:1.3e-45 qcov:84.10 identity:38.50;
247765 248232 CDS
ID metaerg.pl|00299
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0032993; GO:0003677; GO:0001217; GO:0043565; GO:0044212; GO:0000976; GO:0008270; GO:0045892; GO:1900376;
allko_ids K03711;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195506.1 1 155 evalue:4.4e-70 qcov:100.00 identity:87.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01475;
pfam_desc Ferric uptake regulator family;
pfam_id FUR;
pfam_target db:Pfam-A.hmm|PF01475.19 evalue:5.9e-37 score:125.7 best_domain_score:125.4 name:FUR;
sprot_desc Ferric uptake regulation protein;
sprot_id sp|P54574|FUR_BACSU;
sprot_target db:uniprot_sprot|sp|P54574|FUR_BACSU 4 150 evalue:3.7e-47 qcov:94.80 identity:56.50;
248235 249134 CDS
ID metaerg.pl|00300
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0005737; GO:0009037; GO:0007049; GO:0051301; GO:0007059; GO:0006313;
allko_ids K04763;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195503.1 1 299 evalue:2.0e-135 qcov:100.00 identity:78.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00589; PF02899; PF13102;
pfam_desc Phage integrase family; Phage integrase, N-terminal SAM-like domain; Phage integrase SAM-like domain;
pfam_id Phage_integrase; Phage_int_SAM_1; Phage_int_SAM_5;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:4.6e-52 score:175.5 best_domain_score:174.4 name:Phage_integrase; db:Pfam-A.hmm|PF02899.17 evalue:8.8e-18 score:63.6 best_domain_score:63.2 name:Phage_int_SAM_1; db:Pfam-A.hmm|PF13102.6 evalue:3.4e-05 score:23.4 best_domain_score:13.5 name:Phage_int_SAM_5;
sprot_desc Tyrosine recombinase XerD;
sprot_id sp|Q92A53|XERD_LISIN;
sprot_target db:uniprot_sprot|sp|Q92A53|XERD_LISIN 7 299 evalue:1.7e-85 qcov:98.00 identity:51.40;
tigrfam_acc TIGR02225;
tigrfam_desc tyrosine recombinase XerD;
tigrfam_mainrole DNA metabolism;
tigrfam_name recomb_XerD;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02225 evalue:4.9e-116 score:386.2 best_domain_score:386.1 name:TIGR02225;
249249 250418 CDS
ID metaerg.pl|00301
allec_ids 5.4.2.7;
allgo_ids GO:0003824; GO:0046872; GO:0005737; GO:0000287; GO:0030145; GO:0008973; GO:0006015; GO:0043094; GO:0009264;
allko_ids K01839;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478777.1 1 388 evalue:9.7e-191 qcov:99.70 identity:81.40;
kegg_pathway_id 00030; 00230;
kegg_pathway_name Pentose phosphate pathway; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PRPP-PWY; PWY0-1296; PWY0-1297; PWY0-661; PWY0-1295; PWY0-1298;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; purine ribonucleosides degradation;; superpathway of purine deoxyribonucleosides degradation;; ; pyrimidine ribonucleosides degradation;; superpathway of pyrimidine deoxyribonucleosides degradation;;
metacyc_pathway_type Super-Pathways;; Purine-Degradation;; NUCLEO-DEG; Super-Pathways;; ; Pyrimidine-Ribonucleosides-Degradation;; Pyrimidine-Degradation; Super-Pathways;;
pfam_acc PF01676;
pfam_desc Metalloenzyme superfamily;
pfam_id Metalloenzyme;
pfam_target db:Pfam-A.hmm|PF01676.18 evalue:2.7e-37 score:127.7 best_domain_score:126.3 name:Metalloenzyme;
sprot_desc Phosphopentomutase;
sprot_id sp|Q839I2|DEOB_ENTFA;
sprot_target db:uniprot_sprot|sp|Q839I2|DEOB_ENTFA 3 389 evalue:4.1e-172 qcov:99.50 identity:73.10;
tigrfam_acc TIGR01696;
tigrfam_desc phosphopentomutase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name deoB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01696 evalue:1.4e-188 score:625.7 best_domain_score:625.5 name:TIGR01696;
250445 251266 CDS
ID metaerg.pl|00302
allec_ids 2.4.2.1;
allgo_ids GO:0003824; GO:0009116; GO:0004731;
allko_ids K03783;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195495.1 1 273 evalue:4.8e-128 qcov:100.00 identity:83.50;
kegg_pathway_id 00760; 00240; 00230;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Pyrimidine metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id SALVADEHYPOX-PWY; URSIN-PWY; SALVPURINE2-PWY; P121-PWY; PWY-6353; PWY0-1296; PWY-5695; PWY-6579; P1-PWY;
metacyc_pathway_name adenosine nucleotides degradation II;; ureide biosynthesis;; xanthine and xanthosine salvage;; adenine and adenosine salvage I;; purine nucleotides degradation II (aerobic);; purine ribonucleosides degradation;; inosine 5'-phosphate degradation;; superpathway of guanine and guanosine salvage;; ;
metacyc_pathway_type Adenosine-Nucleotides-Degradation;; Polyamine-Biosynthesis; Super-Pathways;; Purine-Nucleotides-Salvage;; Adenine-Adenosine-Salvage;; Purine-Degradation; Super-Pathways;; Purine-Degradation;; Purine-Degradation;; Guanine-Guanosine-Salvage; Super-Pathways;; ;
pfam_acc PF01048;
pfam_desc Phosphorylase superfamily;
pfam_id PNP_UDP_1;
pfam_target db:Pfam-A.hmm|PF01048.20 evalue:1.1e-53 score:181.1 best_domain_score:181.0 name:PNP_UDP_1;
sprot_desc Purine nucleoside phosphorylase 1;
sprot_id sp|P77834|PUNA_GEOSE;
sprot_target db:uniprot_sprot|sp|P77834|PUNA_GEOSE 8 273 evalue:7.0e-94 qcov:97.40 identity:64.80;
tigrfam_acc TIGR01697; TIGR01700;
tigrfam_desc inosine/guanosine/xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name PNPH-PUNA-XAPA; PNPH;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01697 evalue:1.3e-109 score:364.4 best_domain_score:364.2 name:TIGR01697; db:TIGRFAMs.hmm|TIGR01700 evalue:9.2e-110 score:365.1 best_domain_score:364.9 name:TIGR01700;
251490 252839 CDS
ID metaerg.pl|00303
allec_ids 4.1.1.20;
allgo_ids GO:0003824; GO:0008836; GO:0030170; GO:0009089;
allko_ids K01581; K01583; K01586; K01585; K12526;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195539.1 15 443 evalue:6.1e-189 qcov:95.50 identity:75.80;
kegg_pathway_id 00480; 00251; 00220; 00300;
kegg_pathway_name Glutathione metabolism; Glutamate metabolism; Urea cycle and metabolism of amino groups; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY0-781; DAPLYSINESYN-PWY; PWY-724; PWY-2941; P4-PWY; PWY-5097;
metacyc_pathway_name aspartate superpathway;; L-lysine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-lysine biosynthesis II;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; L-lysine biosynthesis VI;;
metacyc_pathway_type Super-Pathways;; LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;;
pfam_acc PF02784; PF00278;
pfam_desc Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Pyridoxal-dependent decarboxylase, C-terminal sheet domain;
pfam_id Orn_Arg_deC_N; Orn_DAP_Arg_deC;
pfam_target db:Pfam-A.hmm|PF02784.16 evalue:1.5e-64 score:216.9 best_domain_score:216.6 name:Orn_Arg_deC_N; db:Pfam-A.hmm|PF00278.22 evalue:7.8e-18 score:63.8 best_domain_score:63.4 name:Orn_DAP_Arg_deC;
sprot_desc Diaminopimelate decarboxylase;
sprot_id sp|P23630|DCDA_BACSU;
sprot_target db:uniprot_sprot|sp|P23630|DCDA_BACSU 21 442 evalue:2.1e-156 qcov:94.00 identity:60.20;
tigrfam_acc TIGR01048;
tigrfam_desc diaminopimelate decarboxylase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name lysA;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01048 evalue:3.2e-149 score:496.1 best_domain_score:496.0 name:TIGR01048;
252854 253219 CDS
ID metaerg.pl|00304
allec_ids 2.3.1.-;
allgo_ids GO:0016746; GO:0009231;
allko_ids K02859;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478774.1 1 120 evalue:1.1e-52 qcov:99.20 identity:83.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5477; PWY-5437; PWY-5981; PWY-6432; PWY1A0-6325; LPSSYN-PWY; PWY-6113; PWY-6413; PWYG-321; FASYN-INITIAL-PWY; PWY-6312; PWY-6442; PWY-6418; PWY1-3; PWY-6397; KDO-NAGLIPASYN-PWY; PWY-5184; PWY-4801; BENZCOA-PWY; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5139; PWY-6310; PWY-5080; ECASYN-PWY; P3-PWY; PWY-6515; PWY-6295; PWY-5284; THREOCAT-PWY; PWY-6438; PWY-84; PWY-5140; PWY0-881; PWY-6411; PWY-5987; PWY-5268; PWY-6316; CENTBENZCOA-PWY; PWY-6404; PWY-5313; PWY-5400; PWY-5209; PWY-5965; PWY-5393; PWY-6412; KDO-LIPASYN-PWY; PWY-5307; PWY-6318; PWY-5405; PWY-5972;
metacyc_pathway_name gallotannin biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; curcuminoid biosynthesis;; actinorhodin biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; superpathway of mycolate biosynthesis;; ginsenoside degradation III;; mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; polyhydroxybutanoate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of (Kdo)2-lipid A biosynthesis;; toluene degradation VI (anaerobic);; aloesone biosynthesis I;; anaerobic aromatic compound degradation (Thauera aromatica);; sophorolipid biosynthesis;; pelargonidin conjugates biosynthesis;; aloesone biosynthesis II;; very long chain fatty acid biosynthesis I;; enterobacterial common antigen biosynthesis;; gallate degradation III (anaerobic);; phloridzin biosynthesis;; ; shisonin biosynthesis;; superpathway of L-threonine metabolism;; phenylphenalenone biosynthesis;; resveratrol biosynthesis;; cannabinoid biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; ginsenoside degradation I;; sorgoleone biosynthesis;; salvianin biosynthesis;; aromatic polyketides biosynthesis;; benzoyl-CoA degradation II (anaerobic);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; amaranthin biosynthesis;; methyl-coenzyme M oxidation to CO2;; fatty acid biosynthesis initiation III;; raspberry ketone biosynthesis;; ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; gentiodelphin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);;
metacyc_pathway_type GALLOTANNINS;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOID-DEG;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; Storage-Compounds-Biosynthesis;; Cell-Wall-Biosynthesis;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; POLYKETIDE-SYN;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Lipid-Biosynthesis;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Fatty-acid-biosynthesis;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; GALLATE-DEG;; FLAVONOID-SYN;; ; ANTHOCYANIN-SYN;; Super-Pathways; THREONINE-DEG;; POLYKETIDE-SYN;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; TERPENOPHENOLICS-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Ginsenoside-Degradation;; QUINONE-SYN;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Benzoyl-CoA-Degradation;; Cell-Wall-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN; Super-Pathways;; BETALAIN-ALKALOIDS;; METHANOGENESIS;; Fatty-acid-biosynthesis;; POLYKETIDE-SYN;; Ginsenoside-Degradation;; Lipid-Biosynthesis;; ANTHOCYANIN-SYN;; PHENYLALANINE-DEG;; BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;;
pfam_acc PF13673;
pfam_desc Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_10;
pfam_target db:Pfam-A.hmm|PF13673.7 evalue:2.9e-07 score:29.7 best_domain_score:29.5 name:Acetyltransf_10;
sprot_desc hypothetical protein;
sprot_id sp|P17622|RIBT_BACSU;
sprot_target db:uniprot_sprot|sp|P17622|RIBT_BACSU 1 120 evalue:1.5e-19 qcov:99.20 identity:39.20;
253235 253978 CDS
ID metaerg.pl|00305
allgo_ids GO:0005737; GO:0007049; GO:0051301; GO:0007059; GO:0006260;
allko_ids K05896;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478772.1 1 244 evalue:4.0e-97 qcov:98.80 identity:71.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02616;
pfam_desc Segregation and condensation protein ScpA;
pfam_id SMC_ScpA;
pfam_target db:Pfam-A.hmm|PF02616.14 evalue:2.4e-45 score:154.5 best_domain_score:154.3 name:SMC_ScpA;
sprot_desc Segregation and condensation protein A;
sprot_id sp|A7Z671|SCPA_BACVZ;
sprot_target db:uniprot_sprot|sp|A7Z671|SCPA_BACVZ 4 243 evalue:4.6e-52 qcov:97.20 identity:47.90;
253997 254551 CDS
ID metaerg.pl|00306
allgo_ids GO:0051304; GO:0005737; GO:0051301; GO:0006260;
allko_ids K06024;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195486.1 1 180 evalue:6.0e-74 qcov:97.80 identity:82.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF04079;
pfam_desc Segregation and condensation complex subunit ScpB;
pfam_id SMC_ScpB;
pfam_target db:Pfam-A.hmm|PF04079.16 evalue:3.9e-52 score:175.3 best_domain_score:175.1 name:SMC_ScpB;
sprot_desc Segregation and condensation protein B;
sprot_id sp|Q834U3|SCPB_ENTFA;
sprot_target db:uniprot_sprot|sp|Q834U3|SCPB_ENTFA 1 183 evalue:6.9e-45 qcov:99.50 identity:51.10;
tigrfam_acc TIGR00281;
tigrfam_desc segregation and condensation protein B;
tigrfam_mainrole DNA metabolism;
tigrfam_name TIGR00281;
tigrfam_sub1role Chromosome-associated proteins;
tigrfam_target db:TIGRFAMs.hmm|TIGR00281 evalue:2.9e-47 score:159.8 best_domain_score:159.5 name:TIGR00281;
254586 255305 CDS
ID metaerg.pl|00307
allec_ids 5.4.99.22; 5.4.99.-;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0005829; GO:0120159; GO:0000455;
allko_ids K06178;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034299169.1 1 239 evalue:7.9e-111 qcov:100.00 identity:84.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5672; PWY-6008; PWY-5992; PWY-6109; PWY-5203; RIBOKIN-PWY; PWY-112; PWY-6005; PWY-5377; PWY-6115;
metacyc_pathway_name ginsenosides biosynthesis;; baruol biosynthesis;; thalianol and derivatives biosynthesis;; mangrove triterpenoid biosynthesis;; soybean saponin I biosynthesis;; ribose phosphorylation;; lupeol biosynthesis;; marneral biosynthesis;; α-amyrin biosynthesis;; ;
metacyc_pathway_type TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; Sugars-And-Polysaccharides-Degradation;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; ;
pfam_acc PF00849; PF01479;
pfam_desc RNA pseudouridylate synthase; S4 domain;
pfam_id PseudoU_synth_2; S4;
pfam_target db:Pfam-A.hmm|PF00849.22 evalue:3.8e-23 score:81.6 best_domain_score:80.9 name:PseudoU_synth_2; db:Pfam-A.hmm|PF01479.25 evalue:1.2e-14 score:53.0 best_domain_score:52.1 name:S4;
sprot_desc Ribosomal large subunit pseudouridine synthase B;
sprot_id sp|P35159|RLUB_BACSU;
sprot_target db:uniprot_sprot|sp|P35159|RLUB_BACSU 1 238 evalue:4.4e-76 qcov:99.60 identity:57.10;
tigrfam_acc TIGR00093;
tigrfam_desc pseudouridine synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00093;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00093 evalue:4.2e-50 score:168.8 best_domain_score:168.2 name:TIGR00093;
255439 256188 CDS
ID metaerg.pl|00308
allgo_ids GO:0000160; GO:0005829; GO:0032993; GO:0001216; GO:0003700; GO:0000156; GO:0000976;
allko_ids K11356; K11640; K00760; K02484; K07642; K11711; K13490; K11231; K10909; K07704; K08282; K01937; K07708; K07645; K07677; K07652; K07646; K07641; K07673; K01120; K08475; K07639; K03407; K07637; K07654; K00936; K07682; K07651; K07718; K02478; K07679; K07648; K08884; K07711; K00873; K11354; K07778; K02575; K07768; K07644; K07709; K07650; K10681; K07676; K06379; K01769; K07717; K07675; K07647; K04757; K11357; K10125; K13761; K02486; K11383; K12767; K07769; K07710; K07640; K01768; K07697; K02489; K07716; K08479; K10916; K02668; K03388; K07678; K10715; K11527; K02030; K07653; K07638; K07636; K14489; K02482; K02480; K07775;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034299390.1 6 249 evalue:3.0e-121 qcov:98.00 identity:90.20;
kegg_pathway_id 00790; 00620; 03090; 02020; 04011; 00240; 05111; 00230; 00983; 00010; 00710;
kegg_pathway_name Folate biosynthesis; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Drug metabolism - other enzymes; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:1.5e-33 score:114.5 best_domain_score:114.0 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:8.4e-28 score:95.5 best_domain_score:94.7 name:Trans_reg_C;
sprot_desc Transcriptional regulatory protein SrrA;
sprot_id sp|Q2FY79|SRRA_STAA8;
sprot_target db:uniprot_sprot|sp|Q2FY79|SRRA_STAA8 12 247 evalue:5.1e-83 qcov:94.80 identity:62.70;
256194 257984 CDS
ID metaerg.pl|00309
allec_ids 2.7.13.3;
allgo_ids GO:0007165; GO:0016021; GO:0005886; GO:0005524; GO:0000156; GO:0000155; GO:0030295; GO:0007234; GO:0006355;
allko_ids K07644; K13532; K07709; K10681; K07676; K06379; K07650; K01769; K07717; K07675; K13040; K10942; K07647; K11357; K10125; K11629; K04757; K14509; K11520; K07769; K02486; K11383; K12767; K01768; K07656; K07710; K07640; K07716; K07697; K02489; K10916; K08479; K07674; K03388; K02668; K07678; K10715; K13587; K11527; K02030; K07636; K07653; K07638; K02480; K14489; K02482; K11640; K11356; K02484; K07642; K11711; K02491; K11231; K07643; K08282; K07704; K10909; K07645; K07677; K07708; K07652; K07673; K08475; K07639; K07646; K13598; K07641; K07637; K03407; K07777; K00936; K07682; K07649; K07654; K07698; K07718; K07651; K07648; K02478; K07679; K11328; K13533; K08884; K00873; K07711; K07768; K11633; K11354; K07778;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195480.1 1 590 evalue:1.7e-271 qcov:99.00 identity:81.40;
kegg_pathway_id 00010; 00710; 05111; 00230; 03090; 00620; 04011; 02020; 00790;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Vibrio cholerae pathogenic cycle; Purine metabolism; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00672; PF02518; PF14501; PF00512;
pfam_desc HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GHKL domain; His Kinase A (phospho-acceptor) domain;
pfam_id HAMP; HATPase_c; HATPase_c_5; HisKA;
pfam_target db:Pfam-A.hmm|PF00672.25 evalue:3.7e-06 score:26.4 best_domain_score:25.1 name:HAMP; db:Pfam-A.hmm|PF02518.26 evalue:1.7e-22 score:79.3 best_domain_score:78.4 name:HATPase_c; db:Pfam-A.hmm|PF14501.6 evalue:1.1e-07 score:30.9 best_domain_score:29.1 name:HATPase_c_5; db:Pfam-A.hmm|PF00512.25 evalue:3.3e-18 score:64.7 best_domain_score:63.5 name:HisKA;
sprot_desc Sensor histidine kinase ResE;
sprot_id sp|P35164|RESE_BACSU;
sprot_target db:uniprot_sprot|sp|P35164|RESE_BACSU 9 592 evalue:1.0e-76 qcov:98.00 identity:33.10;
tm_num 2;
256194 257984 transmembrane_helix
ID metaerg.pl|00310
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o256221-256289i256686-256754o;
257994 258233 CDS
ID metaerg.pl|00311
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
258347 258955 CDS
ID metaerg.pl|00312
allgo_ids GO:0005215; GO:0016021; GO:0005886; GO:0032217; GO:0032218;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195477.1 1 202 evalue:3.7e-85 qcov:100.00 identity:80.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF12822;
pfam_desc ECF transporter, substrate-specific component;
pfam_id ECF_trnsprt;
pfam_target db:Pfam-A.hmm|PF12822.7 evalue:4.1e-19 score:68.5 best_domain_score:68.4 name:ECF_trnsprt;
sprot_desc Riboflavin transporter RibU;
sprot_id sp|Q5M614|RIBU_STRT2;
sprot_target db:uniprot_sprot|sp|Q5M614|RIBU_STRT2 6 184 evalue:1.4e-17 qcov:88.60 identity:33.50;
tm_num 5;
258347 258955 transmembrane_helix
ID metaerg.pl|00313
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o258374-258442i258476-258535o258578-258646i258680-258748o258806-258874i;
259105 260157 CDS
ID metaerg.pl|00314
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195473.1 1 347 evalue:1.4e-68 qcov:99.10 identity:42.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF14493;
pfam_desc Helix-turn-helix domain;
pfam_id HTH_40;
pfam_target db:Pfam-A.hmm|PF14493.6 evalue:1.9e-11 score:43.5 best_domain_score:37.7 name:HTH_40;
260154 261593 CDS
ID metaerg.pl|00315
allec_ids 3.6.4.12;
allgo_ids GO:0003676; GO:0005524; GO:0043590; GO:0005694; GO:0005737; GO:0030894; GO:0043140; GO:0003677; GO:0009378; GO:0032508; GO:0006310; GO:0006281;
allko_ids K13182; K11927; K10896; K12812; K01509; K05591; K13131; K03732; K12614; K05592; K03725; K03654;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034299159.1 1 479 evalue:3.0e-165 qcov:100.00 identity:61.00;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00270; PF00271; PF16124; PF04851;
pfam_desc DEAD/DEAH box helicase; Helicase conserved C-terminal domain; RecQ zinc-binding; Type III restriction enzyme, res subunit;
pfam_id DEAD; Helicase_C; RecQ_Zn_bind; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:4.1e-22 score:78.0 best_domain_score:76.7 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:9.6e-20 score:70.2 best_domain_score:59.7 name:Helicase_C; db:Pfam-A.hmm|PF16124.5 evalue:3.6e-08 score:33.2 best_domain_score:33.2 name:RecQ_Zn_bind; db:Pfam-A.hmm|PF04851.15 evalue:1.1e-12 score:47.5 best_domain_score:46.3 name:ResIII;
sprot_desc Probable ATP-dependent DNA helicase RecS;
sprot_id sp|P50729|RECS_BACSU;
sprot_target db:uniprot_sprot|sp|P50729|RECS_BACSU 17 407 evalue:2.4e-89 qcov:81.60 identity:43.30;
tigrfam_acc TIGR00614;
tigrfam_desc ATP-dependent DNA helicase, RecQ family;
tigrfam_mainrole DNA metabolism;
tigrfam_name recQ_fam;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00614 evalue:4.6e-106 score:354.5 best_domain_score:337.9 name:TIGR00614;
261661 262371 CDS
ID metaerg.pl|00316
allko_ids K01448; K01449;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478761.1 1 236 evalue:5.5e-56 qcov:100.00 identity:65.50;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01476;
pfam_desc LysM domain;
pfam_id LysM;
pfam_target db:Pfam-A.hmm|PF01476.20 evalue:3.4e-10 score:39.1 best_domain_score:38.4 name:LysM;
tm_num 1;
261661 262371 transmembrane_helix
ID metaerg.pl|00317
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i261781-261849o;
262375 263076 CDS
ID metaerg.pl|00318
allec_ids 2.7.4.25; 2.7.4.14;
allgo_ids GO:0004127; GO:0005524; GO:0006139; GO:0005737; GO:0006220;
allko_ids K01918; K13799; K00945;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091485833.1 9 228 evalue:1.1e-88 qcov:94.40 identity:80.90;
kegg_pathway_id 00770; 00240; 00410;
kegg_pathway_name Pantothenate and CoA biosynthesis; Pyrimidine metabolism; beta-Alanine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PRPP-PWY; P1-PWY; PWY0-163; PWY0-162; PWY-5687;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; ; ; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; ;
metacyc_pathway_type Super-Pathways;; ; ; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ;
pfam_acc PF13207; PF13238; PF02224; PF13189;
pfam_desc AAA domain; AAA domain; Cytidylate kinase; Cytidylate kinase-like family;
pfam_id AAA_17; AAA_18; Cytidylate_kin; Cytidylate_kin2;
pfam_target db:Pfam-A.hmm|PF13207.6 evalue:2.2e-07 score:30.6 best_domain_score:23.9 name:AAA_17; db:Pfam-A.hmm|PF13238.6 evalue:6.5e-08 score:32.4 best_domain_score:31.5 name:AAA_18; db:Pfam-A.hmm|PF02224.18 evalue:6e-77 score:257.4 best_domain_score:257.2 name:Cytidylate_kin; db:Pfam-A.hmm|PF13189.6 evalue:2.8e-10 score:39.9 best_domain_score:39.0 name:Cytidylate_kin2;
sprot_desc Cytidylate kinase;
sprot_id sp|Q834T6|KCY_ENTFA;
sprot_target db:uniprot_sprot|sp|Q834T6|KCY_ENTFA 14 231 evalue:1.6e-67 qcov:93.60 identity:63.80;
tigrfam_acc TIGR00017;
tigrfam_desc cytidylate kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name cmk;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00017 evalue:8.4e-82 score:273.2 best_domain_score:273.0 name:TIGR00017;
263174 264571 CDS
ID metaerg.pl|00319
allgo_ids GO:0003676; GO:0005840; GO:0003723;
allko_ids K00962; K03049; K03022; K05366; K12818;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195461.1 1 464 evalue:4.8e-213 qcov:99.80 identity:84.10;
kegg_pathway_id 00240; 00230; 03020;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; RNA polymerase;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00575; PF13509;
pfam_desc S1 RNA binding domain; S1 domain;
pfam_id S1; S1_2;
pfam_target db:Pfam-A.hmm|PF00575.23 evalue:2.6e-70 score:232.0 best_domain_score:86.1 name:S1; db:Pfam-A.hmm|PF13509.6 evalue:1e-07 score:31.1 best_domain_score:17.7 name:S1_2;
sprot_desc 30S ribosomal protein S1;
sprot_id sp|P50889|RS1_LEULA;
sprot_target db:uniprot_sprot|sp|P50889|RS1_LEULA 72 455 evalue:1.3e-95 qcov:82.60 identity:49.00;
264689 266002 CDS
ID metaerg.pl|00320
allgo_ids GO:0005524; GO:0016887; GO:0005525; GO:0042254;
allko_ids K00956; K00860; K00955; K03977;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034299155.1 1 437 evalue:3.2e-235 qcov:100.00 identity:93.60;
kegg_pathway_id 00450; 00920; 00230;
kegg_pathway_name Selenoamino acid metabolism; Sulfur metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00005; PF04548; PF00350; PF02421; PF00009; PF14714; PF01926; PF10662; PF08477; PF03193;
pfam_desc ABC transporter; AIG1 family; Dynamin family; Ferrous iron transport protein B; Elongation factor Tu GTP binding domain; KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; 50S ribosome-binding GTPase; Ethanolamine utilisation - propanediol utilisation; Ras of Complex, Roc, domain of DAPkinase; RsgA GTPase;
pfam_id ABC_tran; AIG1; Dynamin_N; FeoB_N; GTP_EFTU; KH_dom-like; MMR_HSR1; PduV-EutP; Roc; RsgA_GTPase;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:2.5e-06 score:27.3 best_domain_score:13.9 name:ABC_tran; db:Pfam-A.hmm|PF04548.16 evalue:9.4e-19 score:66.8 best_domain_score:34.5 name:AIG1; db:Pfam-A.hmm|PF00350.23 evalue:2e-14 score:53.2 best_domain_score:18.6 name:Dynamin_N; db:Pfam-A.hmm|PF02421.18 evalue:3.5e-27 score:94.1 best_domain_score:48.7 name:FeoB_N; db:Pfam-A.hmm|PF00009.27 evalue:7.5e-22 score:77.1 best_domain_score:40.7 name:GTP_EFTU; db:Pfam-A.hmm|PF14714.6 evalue:1.4e-34 score:117.4 best_domain_score:115.9 name:KH_dom-like; db:Pfam-A.hmm|PF01926.23 evalue:1.3e-52 score:175.9 best_domain_score:88.7 name:MMR_HSR1; db:Pfam-A.hmm|PF10662.9 evalue:2.5e-05 score:23.3 best_domain_score:13.9 name:PduV-EutP; db:Pfam-A.hmm|PF08477.13 evalue:2.1e-07 score:30.4 best_domain_score:14.7 name:Roc; db:Pfam-A.hmm|PF03193.16 evalue:2.5e-11 score:43.0 best_domain_score:20.4 name:RsgA_GTPase;
sprot_desc GTPase Der;
sprot_id sp|Q834T4|DER_ENTFA;
sprot_target db:uniprot_sprot|sp|Q834T4|DER_ENTFA 1 437 evalue:6.2e-193 qcov:100.00 identity:75.30;
tigrfam_acc TIGR00231; TIGR00436; TIGR03594;
tigrfam_desc small GTP-binding protein domain; GTP-binding protein Era; ribosome-associated GTPase EngA;
tigrfam_mainrole Unknown function; Protein synthesis; Protein synthesis;
tigrfam_name small_GTP; era; GTPase_EngA;
tigrfam_sub1role General; Other; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:1.3e-53 score:180.3 best_domain_score:92.6 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00436 evalue:6.1e-47 score:159.4 best_domain_score:80.7 name:TIGR00436; db:TIGRFAMs.hmm|TIGR03594 evalue:5.7e-173 score:575.0 best_domain_score:574.8 name:TIGR03594;
266237 266512 CDS
ID metaerg.pl|00321
allgo_ids GO:0003677; GO:0030261; GO:0009405;
allko_ids K03530;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195455.1 1 91 evalue:2.0e-38 qcov:100.00 identity:97.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00216; PF18291;
pfam_desc Bacterial DNA-binding protein; HU domain fused to wHTH, Ig, or Glycine-rich motif;
pfam_id Bac_DNA_binding; HU-HIG;
pfam_target db:Pfam-A.hmm|PF00216.21 evalue:2.6e-36 score:122.9 best_domain_score:122.8 name:Bac_DNA_binding; db:Pfam-A.hmm|PF18291.1 evalue:5.4e-08 score:32.2 best_domain_score:32.1 name:HU-HIG;
sprot_desc DNA-binding protein HU;
sprot_id sp|P0C0H3|DBH_STRP1;
sprot_target db:uniprot_sprot|sp|P0C0H3|DBH_STRP1 1 91 evalue:3.7e-31 qcov:100.00 identity:79.10;
266718 268058 CDS
ID metaerg.pl|00322
allec_ids 6.3.1.2;
allgo_ids GO:0004356; GO:0006807; GO:0005737; GO:0005524; GO:0046872; GO:0006542;
allko_ids K01915;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478753.1 1 446 evalue:8.9e-241 qcov:100.00 identity:90.40;
kegg_pathway_id 00251; 00550; 02020; 00910;
kegg_pathway_name Glutamate metabolism; Peptidoglycan biosynthesis; Two-component system - General; Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5505; PWY-5675; PWY-381; AMMASSIM-PWY; PWY490-3; PWY-6549; GLNSYN-PWY;
metacyc_pathway_name L-glutamate and L-glutamine biosynthesis;; nitrate reduction V (assimilatory);; nitrate reduction II (assimilatory);; ammonia assimilation cycle III;; nitrate reduction VI (assimilatory);; L-glutamine biosynthesis III;; L-glutamine biosynthesis I;;
metacyc_pathway_type GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;; Nitrate-Reduction;; Nitrate-Reduction;; Ammonia-Assimilation; Super-Pathways;; Nitrate-Reduction;; GLUTAMINE-SYN;; Ammonia-Assimilation; GLUTAMINE-SYN;;
pfam_acc PF00120; PF03951;
pfam_desc Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain;
pfam_id Gln-synt_C; Gln-synt_N;
pfam_target db:Pfam-A.hmm|PF00120.24 evalue:6.3e-133 score:442.3 best_domain_score:442.0 name:Gln-synt_C; db:Pfam-A.hmm|PF03951.19 evalue:1.2e-27 score:94.7 best_domain_score:93.7 name:Gln-synt_N;
sprot_desc Glutamine synthetase;
sprot_id sp|Q5HGC3|GLN1A_STAAC;
sprot_target db:uniprot_sprot|sp|Q5HGC3|GLN1A_STAAC 3 446 evalue:1.5e-181 qcov:99.60 identity:68.00;
tigrfam_acc TIGR00653;
tigrfam_desc glutamine synthetase, type I;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name GlnA;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00653 evalue:5.8e-161 score:535.4 best_domain_score:528.8 name:TIGR00653;
268405 269751 CDS
ID metaerg.pl|00323
allec_ids 6.3.1.2;
allgo_ids GO:0004356; GO:0006807; GO:0005737; GO:0005524; GO:0046872; GO:0006542;
allko_ids K01915;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195449.1 2 448 evalue:9.0e-241 qcov:99.80 identity:89.50;
kegg_pathway_id 00251; 00550; 02020; 00910;
kegg_pathway_name Glutamate metabolism; Peptidoglycan biosynthesis; Two-component system - General; Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6549; GLNSYN-PWY; PWY490-3; PWY-381; AMMASSIM-PWY; PWY-5675; PWY-5505;
metacyc_pathway_name L-glutamine biosynthesis III;; L-glutamine biosynthesis I;; nitrate reduction VI (assimilatory);; nitrate reduction II (assimilatory);; ammonia assimilation cycle III;; nitrate reduction V (assimilatory);; L-glutamate and L-glutamine biosynthesis;;
metacyc_pathway_type GLUTAMINE-SYN;; Ammonia-Assimilation; GLUTAMINE-SYN;; Nitrate-Reduction;; Nitrate-Reduction;; Ammonia-Assimilation; Super-Pathways;; Nitrate-Reduction;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;;
pfam_acc PF00120; PF03951;
pfam_desc Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain;
pfam_id Gln-synt_C; Gln-synt_N;
pfam_target db:Pfam-A.hmm|PF00120.24 evalue:1.7e-136 score:454.0 best_domain_score:453.7 name:Gln-synt_C; db:Pfam-A.hmm|PF03951.19 evalue:2.7e-28 score:96.8 best_domain_score:95.7 name:Gln-synt_N;
sprot_desc Glutamine synthetase;
sprot_id sp|P60890|GLN1A_STAAM;
sprot_target db:uniprot_sprot|sp|P60890|GLN1A_STAAM 6 448 evalue:5.8e-186 qcov:98.90 identity:70.00;
tigrfam_acc TIGR00653;
tigrfam_desc glutamine synthetase, type I;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name GlnA;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00653 evalue:1.3e-169 score:563.9 best_domain_score:557.8 name:TIGR00653;
269926 269853 tRNA
ID metaerg.pl|00324
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
name tRNA_Arg_tct;
270065 270523 CDS
ID metaerg.pl|00325
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195446.1 1 152 evalue:5.3e-44 qcov:100.00 identity:59.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
270747 271307 CDS
ID metaerg.pl|00326
allgo_ids GO:0008654; GO:0016020; GO:0016780;
allko_ids K00998;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091268037.1 1 182 evalue:1.3e-68 qcov:97.80 identity:70.30;
kegg_pathway_id 00260; 00564;
kegg_pathway_name Glycine, serine and threonine metabolism; Glycerophospholipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01066;
pfam_desc CDP-alcohol phosphatidyltransferase;
pfam_id CDP-OH_P_transf;
pfam_target db:Pfam-A.hmm|PF01066.21 evalue:2.3e-16 score:59.6 best_domain_score:59.6 name:CDP-OH_P_transf;
tm_num 4;
270747 271307 transmembrane_helix
ID metaerg.pl|00327
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i270765-270833o270987-271055i271116-271184o271200-271259i;
271422 271862 CDS
ID metaerg.pl|00328
allgo_ids GO:0003700; GO:0006355; GO:0044212;
allko_ids K15973;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195440.1 1 145 evalue:5.4e-62 qcov:99.30 identity:86.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13412; PF13463; PF13601; PF01047; PF12802;
pfam_desc Winged helix-turn-helix DNA-binding; Winged helix DNA-binding domain; Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id HTH_24; HTH_27; HTH_34; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF13412.6 evalue:1.3e-05 score:23.9 best_domain_score:22.9 name:HTH_24; db:Pfam-A.hmm|PF13463.6 evalue:9.6e-09 score:34.9 best_domain_score:33.9 name:HTH_27; db:Pfam-A.hmm|PF13601.6 evalue:1.5e-06 score:27.5 best_domain_score:26.0 name:HTH_34; db:Pfam-A.hmm|PF01047.22 evalue:5.2e-15 score:54.4 best_domain_score:53.4 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:7.5e-08 score:31.4 best_domain_score:30.9 name:MarR_2;
sprot_desc HTH-type transcriptional regulator MhqR;
sprot_id sp|O31672|MHQR_BACSU;
sprot_target db:uniprot_sprot|sp|O31672|MHQR_BACSU 5 141 evalue:1.9e-29 qcov:93.80 identity:48.20;
271959 272306 CDS
ID metaerg.pl|00329
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195437.1 1 115 evalue:2.8e-53 qcov:100.00 identity:94.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF09953;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2187);
pfam_id DUF2187;
pfam_target db:Pfam-A.hmm|PF09953.9 evalue:1.9e-06 score:27.0 best_domain_score:25.9 name:DUF2187;
272449 272904 CDS
ID metaerg.pl|00330
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034299129.1 1 151 evalue:1.4e-68 qcov:100.00 identity:90.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13412; PF13463; PF01047; PF12802;
pfam_desc Winged helix-turn-helix DNA-binding; Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id HTH_24; HTH_27; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF13412.6 evalue:1.7e-05 score:23.5 best_domain_score:20.9 name:HTH_24; db:Pfam-A.hmm|PF13463.6 evalue:1.1e-08 score:34.7 best_domain_score:34.2 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:2.7e-09 score:36.0 best_domain_score:34.4 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:3.4e-07 score:29.3 best_domain_score:28.3 name:MarR_2;
272901 273890 CDS
ID metaerg.pl|00331
allec_ids 2.3.1.180;
allgo_ids GO:0004315; GO:0006633; GO:0005737; GO:0033818;
allko_ids K00648;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106196392.1 3 329 evalue:2.3e-124 qcov:99.40 identity:67.60;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5156; PWY-6519; PWY-6285; PWY-6113; BIOTIN-BIOSYNTHESIS-PWY; FASYN-INITIAL-PWY; PWY-4381; PWY0-881;
metacyc_pathway_name superpathway of fatty acid biosynthesis II (plant);; 8-amino-7-oxononanoate biosynthesis I;; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; biotin biosynthesis I;; superpathway of fatty acid biosynthesis initiation (E. coli);; fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis I (E. coli);;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; 7-Keto-8-aminopelargonate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF08545; PF08541; PF02797; PF08392; PF00108;
pfam_desc 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; Chalcone and stilbene synthases, C-terminal domain; FAE1/Type III polyketide synthase-like protein; Thiolase, N-terminal domain;
pfam_id ACP_syn_III; ACP_syn_III_C; Chal_sti_synt_C; FAE1_CUT1_RppA; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF08545.10 evalue:9.2e-29 score:98.4 best_domain_score:97.3 name:ACP_syn_III; db:Pfam-A.hmm|PF08541.10 evalue:4.8e-31 score:106.0 best_domain_score:104.7 name:ACP_syn_III_C; db:Pfam-A.hmm|PF02797.15 evalue:9e-05 score:21.7 best_domain_score:21.0 name:Chal_sti_synt_C; db:Pfam-A.hmm|PF08392.12 evalue:3.3e-08 score:32.4 best_domain_score:31.6 name:FAE1_CUT1_RppA; db:Pfam-A.hmm|PF00108.23 evalue:1.1e-07 score:30.7 best_domain_score:30.1 name:Thiolase_N;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] synthase 3;
sprot_id sp|C0ME18|FABH_STRS7;
sprot_target db:uniprot_sprot|sp|C0ME18|FABH_STRS7 8 328 evalue:2.8e-89 qcov:97.60 identity:49.50;
tigrfam_acc TIGR00747;
tigrfam_desc 3-oxoacyl-[acyl-carrier-protein] synthase III;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabH;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00747 evalue:1.8e-100 score:335.3 best_domain_score:335.1 name:TIGR00747;
273906 274136 CDS
ID metaerg.pl|00332
allgo_ids GO:0005737; GO:0000036;
allko_ids K02078;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034299126.1 1 76 evalue:3.2e-29 qcov:100.00 identity:96.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00550;
pfam_desc Phosphopantetheine attachment site;
pfam_id PP-binding;
pfam_target db:Pfam-A.hmm|PF00550.25 evalue:7.2e-12 score:44.7 best_domain_score:44.5 name:PP-binding;
sprot_desc Acyl carrier protein;
sprot_id sp|Q9CHF9|ACP_LACLA;
sprot_target db:uniprot_sprot|sp|Q9CHF9|ACP_LACLA 1 71 evalue:7.4e-17 qcov:93.40 identity:66.20;
274156 275106 CDS
ID metaerg.pl|00333
allec_ids 1.13.12.-; 1.3.1.-;
allgo_ids GO:0005737; GO:0016627; GO:0055114; GO:0018580; GO:0000166; GO:0009636;
allko_ids K00459;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091268050.1 1 316 evalue:6.1e-151 qcov:100.00 identity:87.30;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-3481; HCAMHPDEG-PWY; PWY-5393; PWY-6088; PWY1A0-6325; PWY5F9-3233; PWY-5367; PWY-5729; PWY-3461; PWY-5305; PWY-5466; PWY-5972; PWY-5863; PWY-5064; PWY-5063;
metacyc_pathway_name superpathway of L-phenylalanine and L-tyrosine biosynthesis;; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; raspberry ketone biosynthesis;; 3-chlorobenzoate degradation I (via chlorocatechol);; actinorhodin biosynthesis;; phthalate degradation (aerobic);; petroselinate biosynthesis;; vestitol and sativan biosynthesis;; L-tyrosine biosynthesis II;; bixin biosynthesis;; matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);; superpathway of phylloquinol biosynthesis;; chlorophyll a biosynthesis II;; phytyl diphosphate biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Phenolic-Compounds-Degradation;; POLYKETIDE-SYN;; 3-Chlorobenzoate-Degradation;; Antibiotic-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Unsaturated-Fatty-Acids-Biosynthesis;; ISOFLAVONOID-SYN;; TYROSINE-SYN;; APOCAROTENOID-SYN;; LIGNAN-SYN;; Stearate-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; Phytyl-Diphosphate-Biosynthesis;;
pfam_acc PF01180; PF00977; PF00478; PF03060; PF05690;
pfam_desc Dihydroorotate dehydrogenase; Histidine biosynthesis protein; IMP dehydrogenase / GMP reductase domain; Nitronate monooxygenase; Thiazole biosynthesis protein ThiG;
pfam_id DHO_dh; His_biosynth; IMPDH; NMO; ThiG;
pfam_target db:Pfam-A.hmm|PF01180.21 evalue:1e-06 score:27.4 best_domain_score:26.7 name:DHO_dh; db:Pfam-A.hmm|PF00977.21 evalue:2.9e-06 score:26.1 best_domain_score:24.2 name:His_biosynth; db:Pfam-A.hmm|PF00478.25 evalue:5.9e-10 score:37.9 best_domain_score:30.7 name:IMPDH; db:Pfam-A.hmm|PF03060.15 evalue:2.4e-80 score:269.7 best_domain_score:196.0 name:NMO; db:Pfam-A.hmm|PF05690.14 evalue:9.1e-08 score:30.9 best_domain_score:30.2 name:ThiG;
sprot_desc Probable nitronate monooxygenase;
sprot_id sp|Q6GB05|NMO_STAAS;
sprot_target db:uniprot_sprot|sp|Q6GB05|NMO_STAAS 5 310 evalue:5.5e-42 qcov:96.80 identity:34.90;
tigrfam_acc TIGR03151;
tigrfam_desc putative enoyl-[acyl-carrier-protein] reductase II;
tigrfam_name enACPred_II;
tigrfam_target db:TIGRFAMs.hmm|TIGR03151 evalue:1.2e-146 score:487.0 best_domain_score:486.8 name:TIGR03151;
275231 276109 CDS
ID metaerg.pl|00334
allec_ids 2.3.1.39;
allgo_ids GO:0005829; GO:0004314; GO:0006633;
allko_ids K00645;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106196400.1 1 290 evalue:7.2e-106 qcov:99.30 identity:70.00;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id FASYN-INITIAL-PWY; PWY-5156; PWY-6285; PWY-6113; PWY0-881; PWY-4381;
metacyc_pathway_name superpathway of fatty acid biosynthesis initiation (E. coli);; superpathway of fatty acid biosynthesis II (plant);; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; fatty acid biosynthesis initiation I;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00698;
pfam_desc Acyl transferase domain;
pfam_id Acyl_transf_1;
pfam_target db:Pfam-A.hmm|PF00698.21 evalue:1.3e-27 score:96.3 best_domain_score:96.1 name:Acyl_transf_1;
sprot_desc Malonyl CoA-acyl carrier protein transacylase;
sprot_id sp|P71019|FABD_BACSU;
sprot_target db:uniprot_sprot|sp|P71019|FABD_BACSU 1 288 evalue:4.8e-56 qcov:98.60 identity:41.90;
tigrfam_acc TIGR00128;
tigrfam_desc malonyl CoA-acyl carrier protein transacylase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabD;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00128 evalue:8.5e-87 score:290.4 best_domain_score:290.2 name:TIGR00128;
276124 276855 CDS
ID metaerg.pl|00335
allec_ids 1.1.1.100;
allgo_ids GO:0102131; GO:0102132; GO:0004316; GO:0051287; GO:0016616; GO:0030497; GO:0055114;
allko_ids K03366; K12420; K00065; K00022; K08683; K00059;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106196411.1 1 243 evalue:1.4e-110 qcov:100.00 identity:84.40;
kegg_pathway_id 00380; 00930; 00281; 00280; 00310; 00040; 00071; 00650; 00061; 00062; 01040;
kegg_pathway_name Tryptophan metabolism; Caprolactam degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; Pentose and glucuronate interconversions; Fatty acid metabolism; Butanoate metabolism; Fatty acid biosynthesis; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY0-881; PWY-6282; PWY-5973; PWY-5989; BIOTIN-BIOSYNTHESIS-PWY; PWYG-321; PWY-6113; PWY-6285; PWY-5367; FASYN-ELONG-PWY; PWY-6519; PWY-5971; PWY-5156;
metacyc_pathway_name superpathway of fatty acid biosynthesis I (E. coli);; palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate);; cis-vaccenate biosynthesis;; stearate biosynthesis II (bacteria and plants);; biotin biosynthesis I;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; petroselinate biosynthesis;; fatty acid elongation -- saturated;; 8-amino-7-oxononanoate biosynthesis I;; palmitate biosynthesis II (bacteria and plants);; superpathway of fatty acid biosynthesis II (plant);;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Palmitoleate-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Stearate-Biosynthesis;; BIOTIN-SYN; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Unsaturated-Fatty-Acids-Biosynthesis;; Fatty-acid-biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;; Palmitate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:8e-60 score:200.9 best_domain_score:200.6 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:4.7e-61 score:205.5 best_domain_score:205.3 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:5.2e-18 score:64.8 best_domain_score:63.5 name:KR;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] reductase FabG;
sprot_id sp|P51831|FABG_BACSU;
sprot_target db:uniprot_sprot|sp|P51831|FABG_BACSU 1 241 evalue:7.2e-66 qcov:99.20 identity:53.50;
tigrfam_acc TIGR01830;
tigrfam_desc 3-oxoacyl-[acyl-carrier-protein] reductase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name 3oxo_ACP_reduc;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01830 evalue:4.8e-94 score:313.7 best_domain_score:313.5 name:TIGR01830;
276872 278116 CDS
ID metaerg.pl|00336
allec_ids 2.3.1.179;
allgo_ids GO:0005829; GO:0004315; GO:0033817; GO:0006633;
allko_ids K09458;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106196403.1 1 413 evalue:2.0e-202 qcov:99.80 identity:86.70;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6285; PWY-6113; PWYG-321; PWY-5973;
metacyc_pathway_name superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; cis-vaccenate biosynthesis;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;;
pfam_acc PF00109; PF02801;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain;
pfam_id ketoacyl-synt; Ketoacyl-synt_C;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:5.8e-60 score:202.2 best_domain_score:202.2 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:6.3e-38 score:128.7 best_domain_score:127.8 name:Ketoacyl-synt_C;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] synthase 2;
sprot_id sp|O34340|FABF_BACSU;
sprot_target db:uniprot_sprot|sp|O34340|FABF_BACSU 2 411 evalue:4.1e-130 qcov:99.00 identity:57.30;
tigrfam_acc TIGR03150;
tigrfam_desc beta-ketoacyl-acyl-carrier-protein synthase II;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabF;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR03150 evalue:2.1e-184 score:612.0 best_domain_score:611.9 name:TIGR03150;
278113 278589 CDS
ID metaerg.pl|00337
allgo_ids GO:0009317; GO:0003989; GO:0006633;
allko_ids K00658; K01958; K01960; K15037; K00382; K01959; K01571; K01965; K02160;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091268061.1 1 158 evalue:1.8e-39 qcov:100.00 identity:56.50;
kegg_pathway_id 00280; 00010; 00310; 00020; 00260; 00252; 00330; 00620; 00253; 00061; 00640;
kegg_pathway_name Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Lysine degradation; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Alanine and aspartate metabolism; Arginine and proline metabolism; Pyruvate metabolism; Tetracycline biosynthesis; Fatty acid biosynthesis; Propanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00364; PF13533;
pfam_desc Biotin-requiring enzyme; Biotin-lipoyl like;
pfam_id Biotin_lipoyl; Biotin_lipoyl_2;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:3.8e-20 score:70.7 best_domain_score:70.2 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:3.3e-07 score:29.3 best_domain_score:15.5 name:Biotin_lipoyl_2;
sprot_desc Biotin carboxyl carrier protein of acetyl-CoA carboxylase;
sprot_id sp|Q5XAE6|BCCP_STRP6;
sprot_target db:uniprot_sprot|sp|Q5XAE6|BCCP_STRP6 1 158 evalue:6.0e-21 qcov:100.00 identity:39.30;
tigrfam_acc TIGR00531;
tigrfam_desc acetyl-CoA carboxylase, biotin carboxyl carrier protein;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name BCCP;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00531 evalue:6.9e-42 score:142.7 best_domain_score:142.5 name:TIGR00531;
278608 279039 CDS
ID metaerg.pl|00338
allec_ids 4.2.1.59; 4.2.1.-;
allgo_ids GO:0005737; GO:0008659; GO:0047451; GO:0006633; GO:0009245;
allko_ids K02372;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478732.1 1 143 evalue:1.0e-73 qcov:100.00 identity:98.60;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5367; PWY-5972; PWY-6282; PWY-5156; BENZCOA-PWY; PWY-5184; PWY-6007; CENTBENZCOA-PWY; PWY-6113; PWY-6285; PWY-5989; PWYG-321; BIOTIN-BIOSYNTHESIS-PWY; PWY1A0-6325; PWY0-881; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; CARNMET-PWY; PWY-5971; PWY-6519; PWY-5061; FASYN-ELONG-PWY;
metacyc_pathway_name petroselinate biosynthesis;; stearate biosynthesis I (animals and fungi);; palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate);; superpathway of fatty acid biosynthesis II (plant);; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis II;; benzoyl-CoA degradation II (anaerobic);; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; stearate biosynthesis II (bacteria and plants);; mycolate biosynthesis;; biotin biosynthesis I;; actinorhodin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; 4-hydroxyphenylacetate degradation;; L-carnitine degradation I;; palmitate biosynthesis II (bacteria and plants);; 8-amino-7-oxononanoate biosynthesis I;; 6,7,4'-trihydroxyisoflavone biosynthesis;; fatty acid elongation -- saturated;;
metacyc_pathway_type Unsaturated-Fatty-Acids-Biosynthesis;; Stearate-Biosynthesis;; Palmitoleate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; DMNT-Biosynthesis;; Benzoyl-CoA-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Stearate-Biosynthesis;; Fatty-acid-biosynthesis;; BIOTIN-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; CARN-DEG;; Palmitate-Biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis;;
pfam_acc PF07977;
pfam_desc FabA-like domain;
pfam_id FabA;
pfam_target db:Pfam-A.hmm|PF07977.13 evalue:6.4e-33 score:112.5 best_domain_score:112.3 name:FabA;
sprot_desc 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ;
sprot_id sp|Q820V3|FABZ1_ENTFA;
sprot_target db:uniprot_sprot|sp|Q820V3|FABZ1_ENTFA 4 143 evalue:2.0e-52 qcov:97.90 identity:67.90;
tigrfam_acc TIGR01750;
tigrfam_desc beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabZ;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01750 evalue:3.1e-50 score:168.9 best_domain_score:168.7 name:TIGR01750;
279075 280460 CDS
ID metaerg.pl|00339
allec_ids 6.3.4.14;
allgo_ids GO:0005524; GO:0003989; GO:0004075; GO:0046872; GO:0006633; GO:2001295;
allko_ids K11541; K01571; K01965; K01941; K01457; K01955; K01959; K01966; K01954; K11540; K08289; K01958; K00609; K01960; K01968; K03416; K14541; K01964; K01956; K01961;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189868.1 1 461 evalue:1.9e-217 qcov:100.00 identity:82.00;
kegg_pathway_id 00240; 00020; 00670; 00230; 00280; 00253; 00640; 00061; 00252; 00220; 00251; 00620; 00330; 00791;
kegg_pathway_name Pyrimidine metabolism; Citrate cycle (TCA cycle); One carbon pool by folate; Purine metabolism; Valine, leucine and isoleucine degradation; Tetracycline biosynthesis; Propanoate metabolism; Fatty acid biosynthesis; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Glutamate metabolism; Pyruvate metabolism; Arginine and proline metabolism; Atrazine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY0-1264;
metacyc_pathway_name biotin-carboxyl carrier protein assembly;;
metacyc_pathway_type Lipid-Biosynthesis;;
pfam_acc PF02222; PF02785; PF00289; PF02786; PF07478; PF08443;
pfam_desc ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus; RimK-like ATP-grasp domain;
pfam_id ATP-grasp; Biotin_carb_C; Biotin_carb_N; CPSase_L_D2; Dala_Dala_lig_C; RimK;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:5.3e-07 score:28.6 best_domain_score:27.7 name:ATP-grasp; db:Pfam-A.hmm|PF02785.19 evalue:1.5e-36 score:124.0 best_domain_score:122.8 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:6.8e-46 score:154.6 best_domain_score:153.1 name:Biotin_carb_N; db:Pfam-A.hmm|PF02786.17 evalue:5.6e-71 score:237.6 best_domain_score:237.1 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:5.9e-11 score:41.5 best_domain_score:39.8 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF08443.11 evalue:1.1e-05 score:24.4 best_domain_score:22.5 name:RimK;
sprot_desc Biotin carboxylase 1;
sprot_id sp|P49787|ACCC1_BACSU;
sprot_target db:uniprot_sprot|sp|P49787|ACCC1_BACSU 1 439 evalue:8.4e-148 qcov:95.20 identity:58.60;
tigrfam_acc TIGR00514;
tigrfam_desc acetyl-CoA carboxylase, biotin carboxylase subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accC;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00514 evalue:3.9e-196 score:651.4 best_domain_score:651.1 name:TIGR00514;
280447 281316 CDS
ID metaerg.pl|00340
allec_ids 2.1.3.15; 6.4.1.2;
allgo_ids GO:0009317; GO:0003989; GO:0005524; GO:0016743; GO:0008270; GO:0006633; GO:2001295;
allko_ids K01963;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034299102.1 1 289 evalue:2.0e-132 qcov:100.00 identity:82.70;
kegg_pathway_id 00253; 00061; 00640; 00620;
kegg_pathway_name Tetracycline biosynthesis; Fatty acid biosynthesis; Propanoate metabolism; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5743; PWY0-1264; PWY-5156; PWY-5789; PWY-4381; PWY0-881; PWY-6285; PWY-6113; FASYN-INITIAL-PWY;
metacyc_pathway_name 3-hydroxypropanoate cycle;; biotin-carboxyl carrier protein assembly;; superpathway of fatty acid biosynthesis II (plant);; 3-hydroxypropanoate/4-hydroxybutanate cycle;; fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);;
metacyc_pathway_type Autotrophic-CO2-Fixation;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF01039;
pfam_desc Carboxyl transferase domain;
pfam_id Carboxyl_trans;
pfam_target db:Pfam-A.hmm|PF01039.22 evalue:1.3e-18 score:66.1 best_domain_score:65.1 name:Carboxyl_trans;
sprot_desc Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta;
sprot_id sp|Q830B4|ACCD_ENTFA;
sprot_target db:uniprot_sprot|sp|Q830B4|ACCD_ENTFA 1 278 evalue:5.3e-100 qcov:96.20 identity:64.70;
tigrfam_acc TIGR00515;
tigrfam_desc acetyl-CoA carboxylase, carboxyl transferase, beta subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accD;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00515 evalue:1.9e-103 score:344.9 best_domain_score:344.6 name:TIGR00515;
281313 282095 CDS
ID metaerg.pl|00341
allec_ids 2.1.3.15; 6.4.1.2;
allgo_ids GO:0003989; GO:0006633; GO:0009317; GO:0005524; GO:0016743; GO:2001295;
allko_ids K01962;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189874.1 1 260 evalue:1.9e-105 qcov:100.00 identity:74.20;
kegg_pathway_id 00061; 00640; 00253; 00620;
kegg_pathway_name Fatty acid biosynthesis; Propanoate metabolism; Tetracycline biosynthesis; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5743; PWY-5789; PWY0-1264; PWY-5156; PWY0-881; PWY-4381; FASYN-INITIAL-PWY; PWY-6285; PWY-6113;
metacyc_pathway_name 3-hydroxypropanoate cycle;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; biotin-carboxyl carrier protein assembly;; superpathway of fatty acid biosynthesis II (plant);; superpathway of fatty acid biosynthesis I (E. coli);; fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis initiation (E. coli);; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; Autotrophic-CO2-Fixation;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF03255; PF01039;
pfam_desc Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; Carboxyl transferase domain;
pfam_id ACCA; Carboxyl_trans;
pfam_target db:Pfam-A.hmm|PF03255.14 evalue:2.1e-39 score:133.9 best_domain_score:132.9 name:ACCA; db:Pfam-A.hmm|PF01039.22 evalue:1.8e-17 score:62.4 best_domain_score:62.3 name:Carboxyl_trans;
sprot_desc Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha;
sprot_id sp|Q830B5|ACCA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q830B5|ACCA_ENTFA 6 260 evalue:6.1e-87 qcov:98.10 identity:61.60;
tigrfam_acc TIGR00513;
tigrfam_desc acetyl-CoA carboxylase, carboxyl transferase, alpha subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accA;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00513 evalue:1.3e-102 score:342.7 best_domain_score:342.4 name:TIGR00513;
282311 283258 CDS
ID metaerg.pl|00342
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478724.1 1 314 evalue:1.9e-83 qcov:99.70 identity:52.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF14559;
pfam_desc Tetratricopeptide repeat;
pfam_id TPR_19;
pfam_target db:Pfam-A.hmm|PF14559.6 evalue:3.4e-08 score:33.1 best_domain_score:20.7 name:TPR_19;
283411 284721 CDS
ID metaerg.pl|00343
allec_ids 5.2.1.8;
allgo_ids GO:0006457; GO:0015031; GO:0005737; GO:0003755; GO:0007049; GO:0051301;
allko_ids K03545;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478722.1 1 436 evalue:2.5e-203 qcov:100.00 identity:86.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00254; PF05698; PF05697;
pfam_desc FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF) C-terminus; Bacterial trigger factor protein (TF);
pfam_id FKBP_C; Trigger_C; Trigger_N;
pfam_target db:Pfam-A.hmm|PF00254.28 evalue:1.3e-16 score:59.9 best_domain_score:56.3 name:FKBP_C; db:Pfam-A.hmm|PF05698.14 evalue:9.7e-38 score:129.0 best_domain_score:129.0 name:Trigger_C; db:Pfam-A.hmm|PF05697.13 evalue:7.1e-41 score:139.1 best_domain_score:134.4 name:Trigger_N;
sprot_desc Trigger factor;
sprot_id sp|Q837W3|TIG_ENTFA;
sprot_target db:uniprot_sprot|sp|Q837W3|TIG_ENTFA 1 425 evalue:1.3e-142 qcov:97.50 identity:61.70;
tigrfam_acc TIGR00115;
tigrfam_desc trigger factor;
tigrfam_mainrole Protein fate;
tigrfam_name tig;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR00115 evalue:3.1e-130 score:433.9 best_domain_score:433.7 name:TIGR00115;
284822 286075 CDS
ID metaerg.pl|00344
allgo_ids GO:0005524; GO:0046983; GO:0051082; GO:0008270; GO:0006457;
allko_ids K02341; K02343; K03544;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478720.1 1 417 evalue:2.3e-222 qcov:100.00 identity:93.50;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00004; PF07724; PF07728; PF10431; PF00493; PF01078; PF05496; PF06689;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); AAA domain (dynein-related subfamily); C-terminal, D2-small domain, of ClpB protein ; MCM P-loop domain; Magnesium chelatase, subunit ChlI; Holliday junction DNA helicase RuvB P-loop domain; ClpX C4-type zinc finger;
pfam_id AAA; AAA_2; AAA_5; ClpB_D2-small; MCM; Mg_chelatase; RuvB_N; zf-C4_ClpX;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1.9e-15 score:56.7 best_domain_score:55.8 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:3.8e-49 score:166.3 best_domain_score:165.5 name:AAA_2; db:Pfam-A.hmm|PF07728.14 evalue:1.6e-06 score:27.4 best_domain_score:24.1 name:AAA_5; db:Pfam-A.hmm|PF10431.9 evalue:1.9e-17 score:62.3 best_domain_score:60.8 name:ClpB_D2-small; db:Pfam-A.hmm|PF00493.23 evalue:6.1e-06 score:24.7 best_domain_score:23.7 name:MCM; db:Pfam-A.hmm|PF01078.21 evalue:3.8e-06 score:25.7 best_domain_score:15.5 name:Mg_chelatase; db:Pfam-A.hmm|PF05496.12 evalue:1.2e-06 score:27.6 best_domain_score:24.8 name:RuvB_N; db:Pfam-A.hmm|PF06689.13 evalue:4.5e-19 score:67.3 best_domain_score:66.4 name:zf-C4_ClpX;
sprot_desc ATP-dependent Clp protease ATP-binding subunit ClpX;
sprot_id sp|Q833M7|CLPX_ENTFA;
sprot_target db:uniprot_sprot|sp|Q833M7|CLPX_ENTFA 1 406 evalue:3.7e-171 qcov:97.40 identity:73.50;
tigrfam_acc TIGR00382;
tigrfam_desc ATP-dependent Clp protease, ATP-binding subunit ClpX;
tigrfam_mainrole Protein fate;
tigrfam_name clpX;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00382 evalue:1e-200 score:666.2 best_domain_score:666.1 name:TIGR00382;
286392 286997 CDS
ID metaerg.pl|00345
allgo_ids GO:0005525; GO:0046872; GO:0000917;
allko_ids K03978;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189882.1 1 199 evalue:7.7e-91 qcov:99.00 identity:82.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02421; PF01926;
pfam_desc Ferrous iron transport protein B; 50S ribosome-binding GTPase;
pfam_id FeoB_N; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF02421.18 evalue:9.6e-06 score:24.4 best_domain_score:23.8 name:FeoB_N; db:Pfam-A.hmm|PF01926.23 evalue:6.6e-21 score:73.8 best_domain_score:73.3 name:MMR_HSR1;
sprot_desc Probable GTP-binding protein EngB;
sprot_id sp|A7Z7A9|ENGB_BACVZ;
sprot_target db:uniprot_sprot|sp|A7Z7A9|ENGB_BACVZ 5 192 evalue:1.3e-65 qcov:93.50 identity:61.20;
tigrfam_acc TIGR03598;
tigrfam_desc ribosome biogenesis GTP-binding protein YsxC;
tigrfam_mainrole Protein synthesis;
tigrfam_name GTPase_YsxC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR03598 evalue:1.3e-68 score:229.6 best_domain_score:229.4 name:TIGR03598;
286994 288133 CDS
ID metaerg.pl|00346
allgo_ids GO:0008883; GO:0033014; GO:0050661; GO:0055114;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189885.1 1 379 evalue:1.1e-127 qcov:100.00 identity:59.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF05201; PF01488;
pfam_desc Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase;
pfam_id GlutR_N; Shikimate_DH;
pfam_target db:Pfam-A.hmm|PF05201.15 evalue:9.1e-12 score:44.2 best_domain_score:43.3 name:GlutR_N; db:Pfam-A.hmm|PF01488.20 evalue:2.6e-06 score:26.8 best_domain_score:25.0 name:Shikimate_DH;
288363 289664 CDS
ID metaerg.pl|00347
allec_ids 3.6.5.-;
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0000287; GO:0042254;
allko_ids K03979;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091269007.1 3 433 evalue:3.8e-220 qcov:99.50 identity:87.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00025; PF09269; PF02421; PF01018; PF01926;
pfam_desc ADP-ribosylation factor family; Domain of unknown function (DUF1967); Ferrous iron transport protein B; GTP1/OBG; 50S ribosome-binding GTPase;
pfam_id Arf; DUF1967; FeoB_N; GTP1_OBG; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00025.21 evalue:3.6e-05 score:22.5 best_domain_score:20.5 name:Arf; db:Pfam-A.hmm|PF09269.11 evalue:7.6e-26 score:89.1 best_domain_score:88.2 name:DUF1967; db:Pfam-A.hmm|PF02421.18 evalue:1.9e-08 score:33.2 best_domain_score:31.5 name:FeoB_N; db:Pfam-A.hmm|PF01018.22 evalue:7.9e-59 score:196.9 best_domain_score:196.3 name:GTP1_OBG; db:Pfam-A.hmm|PF01926.23 evalue:2.5e-23 score:81.5 best_domain_score:80.7 name:MMR_HSR1;
sprot_desc GTPase Obg;
sprot_id sp|Q834V4|OBG_ENTFA;
sprot_target db:uniprot_sprot|sp|Q834V4|OBG_ENTFA 1 433 evalue:1.2e-185 qcov:100.00 identity:72.60;
tigrfam_acc TIGR02729; TIGR03595;
tigrfam_desc Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension;
tigrfam_mainrole Protein synthesis;
tigrfam_name Obg_CgtA; Obg_CgtA_exten;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02729 evalue:2.1e-139 score:463.2 best_domain_score:462.9 name:TIGR02729; db:TIGRFAMs.hmm|TIGR03595 evalue:2.7e-27 score:93.6 best_domain_score:90.9 name:TIGR03595;
289685 290620 CDS
ID metaerg.pl|00348
allec_ids 3.1.26.11;
allgo_ids GO:0042781; GO:0008270;
allko_ids K00784;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091269006.1 1 310 evalue:1.5e-141 qcov:99.70 identity:79.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00753; PF12706;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:6.1e-11 score:41.9 best_domain_score:41.0 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:2.2e-17 score:62.4 best_domain_score:35.9 name:Lactamase_B_2;
sprot_desc Ribonuclease Z;
sprot_id sp|Q818V3|RNZ_BACCR;
sprot_target db:uniprot_sprot|sp|Q818V3|RNZ_BACCR 1 309 evalue:1.2e-105 qcov:99.40 identity:58.90;
tigrfam_acc TIGR02651;
tigrfam_desc ribonuclease Z;
tigrfam_mainrole Transcription;
tigrfam_name RNase_Z;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR02651 evalue:1.6e-114 score:381.2 best_domain_score:381.0 name:TIGR02651;
290625 291416 CDS
ID metaerg.pl|00349
allec_ids 1.-.-.-;
allgo_ids GO:0016491;
allko_ids K03366; K12420; K00022; K07124;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189890.1 1 263 evalue:1.1e-97 qcov:100.00 identity:65.80;
kegg_pathway_id 00281; 00280; 00310; 00380; 00930; 00062; 00071; 00650;
kegg_pathway_name Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; Tryptophan metabolism; Caprolactam degradation; Fatty acid elongation in mitochondria; Fatty acid metabolism; Butanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-4302; PWY-5271; PWY-5826; PWY-2821; PWY-5469; PWY-5987; PWY-5479; PWY-6113; PWYG-321;
metacyc_pathway_name aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:5.8e-60 score:201.3 best_domain_score:200.9 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:7e-42 score:142.8 best_domain_score:142.6 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:6.7e-16 score:57.9 best_domain_score:57.6 name:KR;
sprot_desc Uncharacterized oxidoreductase YqjQ;
sprot_id sp|P54554|YQJQ_BACSU;
sprot_target db:uniprot_sprot|sp|P54554|YQJQ_BACSU 1 263 evalue:5.3e-54 qcov:100.00 identity:44.10;
291493 291795 CDS
ID metaerg.pl|00350
allgo_ids GO:0005887;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034299072.1 1 83 evalue:4.9e-22 qcov:83.00 identity:75.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF06305;
pfam_desc Lipopolysaccharide assembly protein A domain;
pfam_id LapA_dom;
pfam_target db:Pfam-A.hmm|PF06305.11 evalue:1.9e-13 score:49.3 best_domain_score:49.3 name:LapA_dom;
tm_num 2;
291493 291795 transmembrane_helix
ID metaerg.pl|00351
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i291511-291567o291610-291678i;
291820 292683 CDS
ID metaerg.pl|00352
allgo_ids GO:0008289;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478710.1 1 287 evalue:1.0e-133 qcov:100.00 identity:81.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF13684; PF02645;
pfam_desc Dihydroxyacetone kinase family; Uncharacterised protein, DegV family COG1307;
pfam_id Dak1_2; DegV;
pfam_target db:Pfam-A.hmm|PF13684.6 evalue:1.9e-07 score:29.7 best_domain_score:29.4 name:Dak1_2; db:Pfam-A.hmm|PF02645.16 evalue:5.6e-76 score:254.8 best_domain_score:254.5 name:DegV;
sprot_desc DegV domain-containing protein CA_C1624;
sprot_id sp|Q97IL6|Y1624_CLOAB;
sprot_target db:uniprot_sprot|sp|Q97IL6|Y1624_CLOAB 4 281 evalue:2.6e-54 qcov:96.90 identity:37.40;
tigrfam_acc TIGR00762;
tigrfam_desc EDD domain protein, DegV family;
tigrfam_mainrole Unknown function;
tigrfam_name DegV;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00762 evalue:1.3e-80 score:269.7 best_domain_score:269.5 name:TIGR00762;
292777 295113 CDS
ID metaerg.pl|00353
allec_ids 3.1.-.-;
allgo_ids GO:0003676; GO:0008409; GO:0003677; GO:0006310; GO:0006281;
allko_ids K07462;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189898.1 1 765 evalue:2.6e-280 qcov:98.30 identity:62.50;
kegg_pathway_id 03440; 03430; 03410;
kegg_pathway_name Homologous recombination; Mismatch repair; Base excision repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01368; PF02272; PF17768; PF10141;
pfam_desc DHH family; DHHA1 domain; RecJ OB domain; Single-strand DNA-specific exonuclease, C terminal domain;
pfam_id DHH; DHHA1; RecJ_OB; ssDNA-exonuc_C;
pfam_target db:Pfam-A.hmm|PF01368.20 evalue:1.1e-11 score:44.1 best_domain_score:42.5 name:DHH; db:Pfam-A.hmm|PF02272.19 evalue:5.1e-22 score:78.0 best_domain_score:75.7 name:DHHA1; db:Pfam-A.hmm|PF17768.1 evalue:8.1e-28 score:96.0 best_domain_score:94.2 name:RecJ_OB; db:Pfam-A.hmm|PF10141.9 evalue:7.9e-48 score:162.0 best_domain_score:162.0 name:ssDNA-exonuc_C;
sprot_desc Single-stranded-DNA-specific exonuclease RecJ;
sprot_id sp|O32044|RECJ_BACSU;
sprot_target db:uniprot_sprot|sp|O32044|RECJ_BACSU 1 760 evalue:8.6e-137 qcov:97.70 identity:36.30;
tigrfam_acc TIGR00644;
tigrfam_desc single-stranded-DNA-specific exonuclease RecJ;
tigrfam_mainrole DNA metabolism;
tigrfam_name recJ;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00644 evalue:1e-164 score:547.9 best_domain_score:547.6 name:TIGR00644;
295114 295626 CDS
ID metaerg.pl|00354
allec_ids 2.4.2.7;
allgo_ids GO:0009116; GO:0005737; GO:0003999; GO:0006168; GO:0044209; GO:0006166;
allko_ids K00762; K00759;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478707.1 1 170 evalue:5.5e-82 qcov:100.00 identity:88.20;
kegg_pathway_id 00230; 00240; 00983;
kegg_pathway_name Purine metabolism; Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id SALVADEHYPOX-PWY; P1-PWY; P121-PWY;
metacyc_pathway_name adenosine nucleotides degradation II;; ; adenine and adenosine salvage I;;
metacyc_pathway_type Adenosine-Nucleotides-Degradation;; ; Adenine-Adenosine-Salvage;;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:1.7e-16 score:59.4 best_domain_score:59.1 name:Pribosyltran;
sprot_desc Adenine phosphoribosyltransferase;
sprot_id sp|Q834G6|APT_ENTFA;
sprot_target db:uniprot_sprot|sp|Q834G6|APT_ENTFA 1 170 evalue:2.8e-72 qcov:100.00 identity:77.10;
tigrfam_acc TIGR01090;
tigrfam_desc adenine phosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name apt;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01090 evalue:1.9e-66 score:222.5 best_domain_score:222.3 name:TIGR01090;
296547 295912 CDS
ID metaerg.pl|00355
allec_ids 3.4.21.88;
allgo_ids GO:0004252; GO:0006508; GO:0003677; GO:0006281; GO:0006260; GO:0045892; GO:0009432;
allko_ids K01356;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189903.1 1 210 evalue:4.0e-106 qcov:99.50 identity:92.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01726; PF00717;
pfam_desc LexA DNA binding domain; Peptidase S24-like;
pfam_id LexA_DNA_bind; Peptidase_S24;
pfam_target db:Pfam-A.hmm|PF01726.16 evalue:1.5e-19 score:68.7 best_domain_score:68.1 name:LexA_DNA_bind; db:Pfam-A.hmm|PF00717.23 evalue:5.8e-18 score:63.9 best_domain_score:63.2 name:Peptidase_S24;
sprot_desc LexA repressor;
sprot_id sp|Q834R0|LEXA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q834R0|LEXA_ENTFA 6 210 evalue:8.1e-82 qcov:97.20 identity:73.20;
tigrfam_acc TIGR00498;
tigrfam_desc repressor LexA;
tigrfam_mainrole Regulatory functions;
tigrfam_name lexA;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00498 evalue:2.1e-63 score:212.8 best_domain_score:212.4 name:TIGR00498;
296745 296987 CDS
ID metaerg.pl|00356
allgo_ids GO:0005737;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264505.1 1 80 evalue:3.2e-32 qcov:100.00 identity:93.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF05979;
pfam_desc Bacterial protein of unknown function (DUF896);
pfam_id DUF896;
pfam_target db:Pfam-A.hmm|PF05979.12 evalue:1.9e-30 score:103.7 best_domain_score:103.3 name:DUF896;
sprot_desc hypothetical protein;
sprot_id sp|A3CQ04|Y1878_STRSV;
sprot_target db:uniprot_sprot|sp|A3CQ04|Y1878_STRSV 2 79 evalue:1.7e-19 qcov:97.50 identity:56.40;
297094 299085 CDS
ID metaerg.pl|00357
allec_ids 2.2.1.1;
allgo_ids GO:0008661; GO:0016114; GO:0046872; GO:0004802;
allko_ids K00163; K00615;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106193483.1 1 663 evalue:0.0e+00 qcov:100.00 identity:88.70;
kegg_pathway_id 00650; 00252; 01051; 00620; 00020; 00290; 00010; 00030; 00710;
kegg_pathway_name Butanoate metabolism; Alanine and aspartate metabolism; Biosynthesis of ansamycins; Pyruvate metabolism; Citrate cycle (TCA cycle); Valine, leucine and isoleucine biosynthesis; Glycolysis / Gluconeogenesis; Pentose phosphate pathway; Carbon fixation in photosynthetic organisms;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5723; PHOTOALL-PWY; NONOXIPENT-PWY; PWY-5979; P124-PWY; P185-PWY; PWY-1861; P21-PWY; PENTOSE-P-PWY; PWY-5993; CALVIN-PWY;
metacyc_pathway_name Rubisco shunt;; oxygenic photosynthesis;; pentose phosphate pathway (non-oxidative branch);; 3-amino-5-hydroxybenzoate biosynthesis;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; formaldehyde assimilation II (assimilatory RuMP Cycle);; pentose phosphate pathway (partial);; pentose phosphate pathway;; superpathway of rifamycin B biosynthesis;; Calvin-Benson-Bassham cycle;;
metacyc_pathway_type Energy-Metabolism;; Photosynthesis; Super-Pathways;; Pentose-Phosphate-Cycle;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; Formaldehyde-Assimilation;; Pentose-Phosphate-Cycle;; Pentose-Phosphate-Cycle; Super-Pathways;; Antibiotic-Biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;;
pfam_acc PF13292; PF00676; PF02775; PF02780; PF00456; PF02779;
pfam_desc 1-deoxy-D-xylulose-5-phosphate synthase; Dehydrogenase E1 component; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Transketolase, C-terminal domain; Transketolase, thiamine diphosphate binding domain; Transketolase, pyrimidine binding domain;
pfam_id DXP_synthase_N; E1_dh; TPP_enzyme_C; Transketolase_C; Transketolase_N; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF13292.6 evalue:3e-05 score:22.6 best_domain_score:13.2 name:DXP_synthase_N; db:Pfam-A.hmm|PF00676.20 evalue:7.6e-06 score:24.3 best_domain_score:23.0 name:E1_dh; db:Pfam-A.hmm|PF02775.21 evalue:4.5e-05 score:22.5 best_domain_score:16.8 name:TPP_enzyme_C; db:Pfam-A.hmm|PF02780.20 evalue:1.6e-10 score:40.2 best_domain_score:38.9 name:Transketolase_C; db:Pfam-A.hmm|PF00456.21 evalue:2.9e-151 score:502.4 best_domain_score:498.2 name:Transketolase_N; db:Pfam-A.hmm|PF02779.24 evalue:6.1e-42 score:142.5 best_domain_score:141.4 name:Transket_pyr;
sprot_desc Transketolase;
sprot_id sp|Q5XAK5|TKT_STRP6;
sprot_target db:uniprot_sprot|sp|Q5XAK5|TKT_STRP6 2 663 evalue:4.6e-248 qcov:99.80 identity:63.80;
tigrfam_acc TIGR00232;
tigrfam_desc transketolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tktlase_bact;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00232 evalue:6.9e-287 score:952.3 best_domain_score:951.9 name:TIGR00232;
299267 299506 CDS
ID metaerg.pl|00358
allgo_ids GO:0016021; GO:0005886;
allko_ids K09976;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034299051.1 1 79 evalue:2.3e-30 qcov:100.00 identity:97.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF03672;
pfam_desc Uncharacterised protein family (UPF0154);
pfam_id UPF0154;
pfam_target db:Pfam-A.hmm|PF03672.13 evalue:5.9e-31 score:105.5 best_domain_score:105.2 name:UPF0154;
sprot_desc hypothetical protein;
sprot_id sp|Q49XD7|Y1415_STAS1;
sprot_target db:uniprot_sprot|sp|Q49XD7|Y1415_STAS1 1 56 evalue:1.5e-17 qcov:70.90 identity:80.40;
tm_num 1;
299267 299506 transmembrane_helix
ID metaerg.pl|00359
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o299276-299344i;
299610 301361 CDS
ID metaerg.pl|00360
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887; GO:0046677;
allko_ids K02010; K05847; K02006; K02052; K02017; K06861; K02071; K01996; K02045; K11072; K01995; K10111; K02023; K18889;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478698.1 1 582 evalue:1.7e-284 qcov:99.80 identity:86.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6171; PWY-6135; PWY-6188; PWY-6166; PWYG-321; PWY-6113;
metacyc_pathway_name ; ; ; ; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:8.5e-41 score:139.6 best_domain_score:139.3 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:1.8e-32 score:112.0 best_domain_score:111.0 name:ABC_tran;
sprot_desc Probable multidrug resistance ABC transporter ATP-binding/permease protein YheI;
sprot_id sp|O07550|YHEI_BACSU;
sprot_target db:uniprot_sprot|sp|O07550|YHEI_BACSU 3 581 evalue:3.7e-140 qcov:99.30 identity:44.00;
tm_num 6;
299610 301361 transmembrane_helix
ID metaerg.pl|00361
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i299664-299732o299775-299828i300009-300077o300087-300146i300345-300413o300441-300509i;
301361 303148 CDS
ID metaerg.pl|00362
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887;
allko_ids K01996; K06861; K02006; K01995; K18890;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478697.1 1 595 evalue:3.6e-298 qcov:100.00 identity:90.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:1.3e-38 score:132.5 best_domain_score:132.0 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:1.8e-32 score:111.9 best_domain_score:111.0 name:ABC_tran;
sprot_desc Putative ABC transporter ATP-binding protein exp8;
sprot_id sp|P35598|EXP8_STRPN;
sprot_target db:uniprot_sprot|sp|P35598|EXP8_STRPN 15 589 evalue:1.3e-132 qcov:96.60 identity:46.10;
tm_num 5;
301361 303148 transmembrane_helix
ID metaerg.pl|00363
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i301466-301534o301562-301621i301802-301870o301880-301948i302132-302200o;
303830 303240 CDS
ID metaerg.pl|00364
allec_ids 2.3.1.n4;
allgo_ids GO:0016746; GO:0016021; GO:0005886; GO:0003841; GO:0006654;
allko_ids K13510; K13512; K00655;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189918.1 1 196 evalue:4.7e-85 qcov:100.00 identity:77.60;
kegg_pathway_id 00565; 00561; 00564;
kegg_pathway_name Ether lipid metabolism; Glycerolipid metabolism; Glycerophospholipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01553;
pfam_desc Acyltransferase;
pfam_id Acyltransferase;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:5.2e-24 score:83.6 best_domain_score:83.3 name:Acyltransferase;
sprot_desc 1-acyl-sn-glycerol-3-phosphate acyltransferase;
sprot_id sp|Q8DNY1|PLSC_STRR6;
sprot_target db:uniprot_sprot|sp|Q8DNY1|PLSC_STRR6 1 195 evalue:2.9e-49 qcov:99.50 identity:47.40;
304068 304826 CDS
ID metaerg.pl|00365
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0015935;
allko_ids K02967;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478694.1 1 252 evalue:1.6e-138 qcov:100.00 identity:99.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00318;
pfam_desc Ribosomal protein S2;
pfam_id Ribosomal_S2;
pfam_target db:Pfam-A.hmm|PF00318.20 evalue:5.6e-102 score:338.7 best_domain_score:338.5 name:Ribosomal_S2;
sprot_desc 30S ribosomal protein S2;
sprot_id sp|B3WES8|RS2_LACCB;
sprot_target db:uniprot_sprot|sp|B3WES8|RS2_LACCB 1 252 evalue:1.2e-111 qcov:100.00 identity:76.80;
tigrfam_acc TIGR01011;
tigrfam_desc ribosomal protein uS2;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpsB_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01011 evalue:2.8e-112 score:372.6 best_domain_score:372.4 name:TIGR01011;
304873 305757 CDS
ID metaerg.pl|00366
allgo_ids GO:0003746; GO:0006414; GO:0005737;
allko_ids K02357;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478692.1 1 294 evalue:1.3e-147 qcov:100.00 identity:93.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00889;
pfam_desc Elongation factor TS;
pfam_id EF_TS;
pfam_target db:Pfam-A.hmm|PF00889.19 evalue:6.7e-74 score:247.2 best_domain_score:246.7 name:EF_TS;
sprot_desc Elongation factor Ts;
sprot_id sp|Q831V0|EFTS_ENTFA;
sprot_target db:uniprot_sprot|sp|Q831V0|EFTS_ENTFA 1 291 evalue:4.1e-100 qcov:99.00 identity:64.30;
tigrfam_acc TIGR00116;
tigrfam_desc translation elongation factor Ts;
tigrfam_mainrole Protein synthesis;
tigrfam_name tsf;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00116 evalue:4.7e-106 score:353.4 best_domain_score:353.2 name:TIGR00116;
305899 306630 CDS
ID metaerg.pl|00367
allec_ids 2.7.4.22;
allgo_ids GO:0005737; GO:0005524; GO:0033862; GO:0044210;
allko_ids K00003; K00928; K12524; K12525; K09903;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478689.1 1 240 evalue:2.4e-123 qcov:98.80 identity:95.40;
kegg_pathway_id 00260; 00240; 00300;
kegg_pathway_name Glycine, serine and threonine metabolism; Pyrimidine metabolism; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00696;
pfam_desc Amino acid kinase family;
pfam_id AA_kinase;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:1.3e-30 score:106.0 best_domain_score:105.8 name:AA_kinase;
sprot_desc Uridylate kinase;
sprot_id sp|Q831V1|PYRH_ENTFA;
sprot_target db:uniprot_sprot|sp|Q831V1|PYRH_ENTFA 1 240 evalue:2.2e-107 qcov:98.80 identity:80.00;
tigrfam_acc TIGR02075;
tigrfam_desc UMP kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name pyrH_bact;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02075 evalue:2.9e-99 score:330.5 best_domain_score:330.4 name:TIGR02075;
306623 307171 CDS
ID metaerg.pl|00368
allgo_ids GO:0005737; GO:0006415;
allko_ids K02838;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264482.1 1 182 evalue:2.3e-78 qcov:100.00 identity:83.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01765;
pfam_desc Ribosome recycling factor;
pfam_id RRF;
pfam_target db:Pfam-A.hmm|PF01765.19 evalue:5.5e-60 score:201.2 best_domain_score:201.0 name:RRF;
sprot_desc Ribosome-recycling factor;
sprot_id sp|Q831V2|RRF_ENTFA;
sprot_target db:uniprot_sprot|sp|Q831V2|RRF_ENTFA 1 181 evalue:6.0e-57 qcov:99.50 identity:58.70;
tigrfam_acc TIGR00496;
tigrfam_desc ribosome recycling factor;
tigrfam_mainrole Protein synthesis;
tigrfam_name frr;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00496 evalue:5.3e-64 score:214.2 best_domain_score:214.0 name:TIGR00496;
307469 308275 CDS
ID metaerg.pl|00369
allec_ids 2.5.1.-; 2.5.1.31;
allgo_ids GO:0016765; GO:0000287; GO:0004659;
allko_ids K00806;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189935.1 25 268 evalue:5.6e-113 qcov:91.00 identity:81.10;
kegg_pathway_id 00900;
kegg_pathway_name Terpenoid biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6403; PWY-5817; PWY-5134; PWY-6520; PWY-5785; PWY-5838; PWY-4502; PWY-5064; PWY-5899; PWY-5893; PWY-5027; PWY-6383; PWY-6129; PWY-5133; PWY-5864; PWY-6263; PWY-5132; PWY-5808; PWY-5897; PWY-5805; PWY-5783; POLYISOPRENSYN-PWY; PWY-5861; PWY-724; PWY-6262; PWY-5135; PWY-5806; PWY-6404; PWY-5701; PWY-5140; PWY-5896; PWY-5862; PWY-5845; PWY-5068; PWY-2681; PWY-5898; PWY-5816; PWY-5863;
metacyc_pathway_name carrageenan biosynthesis;; dodecaprenyl diphosphate biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; di-trans,poly-cis-undecaprenyl phosphate biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; wighteone and luteone biosynthesis;; chlorophyll a biosynthesis II;; superpathway of menaquinol-13 biosynthesis;; tridecaprenyl diphosphate biosynthesis;; phylloquinol biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; lupulone and humulone biosynthesis;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; polyisoprenoid biosynthesis (E. coli);; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; demethylmenaquinol-8 biosynthesis II;; xanthohumol biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; shikonin biosynthesis;; cannabinoid biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;; superpathway of menaquinol-12 biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;;
metacyc_pathway_type Polysaccharides-Biosynthesis;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Lipid-Biosynthesis;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; PRENYLFLAVONOID-SYN;; Polyprenyl-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; QUINONE-SYN;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF01255;
pfam_desc Putative undecaprenyl diphosphate synthase;
pfam_id Prenyltransf;
pfam_target db:Pfam-A.hmm|PF01255.19 evalue:2.5e-78 score:261.9 best_domain_score:261.6 name:Prenyltransf;
sprot_desc Isoprenyl transferase;
sprot_id sp|Q831K9|ISPT_ENTFA;
sprot_target db:uniprot_sprot|sp|Q831K9|ISPT_ENTFA 33 268 evalue:1.8e-78 qcov:88.10 identity:58.60;
tigrfam_acc TIGR00055;
tigrfam_desc di-trans,poly-cis-decaprenylcistransferase;
tigrfam_mainrole Cell envelope;
tigrfam_name uppS;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00055 evalue:9.7e-84 score:279.5 best_domain_score:279.3 name:TIGR00055;
308303 309082 CDS
ID metaerg.pl|00370
allec_ids 2.7.7.41;
allgo_ids GO:0016021; GO:0005886; GO:0004605; GO:0016024;
allko_ids K00902; K00981;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189938.1 1 258 evalue:7.3e-86 qcov:99.60 identity:65.50;
kegg_pathway_id 00564; 00510;
kegg_pathway_name Glycerophospholipid metabolism; N-Glycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PHOSLIPSYN2-PWY; PWY-5667; PWY4FS-8; PHOSLIPSYN-PWY; PWY0-1319; PWY4FS-7; PWY-5981;
metacyc_pathway_name superpathway of phospholipid biosynthesis II (plants);; CDP-diacylglycerol biosynthesis I;; phosphatidylglycerol biosynthesis II (non-plastidic);; superpathway of phospholipid biosynthesis I (bacteria);; CDP-diacylglycerol biosynthesis II;; phosphatidylglycerol biosynthesis I (plastidic);; CDP-diacylglycerol biosynthesis III;;
metacyc_pathway_type Phospholipid-Biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;;
pfam_acc PF01148;
pfam_desc Cytidylyltransferase family;
pfam_id CTP_transf_1;
pfam_target db:Pfam-A.hmm|PF01148.20 evalue:3.9e-59 score:199.8 best_domain_score:199.7 name:CTP_transf_1;
sprot_desc Phosphatidate cytidylyltransferase;
sprot_id sp|Q4L5W3|CDSA_STAHJ;
sprot_target db:uniprot_sprot|sp|Q4L5W3|CDSA_STAHJ 4 256 evalue:5.9e-42 qcov:97.70 identity:42.30;
tm_num 6;
308303 309082 transmembrane_helix
ID metaerg.pl|00371
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o308345-308413i308447-308506o308519-308587i308606-308674o308687-308755i308816-308884o;
309110 310378 CDS
ID metaerg.pl|00372
allec_ids 3.4.24.-;
allgo_ids GO:0005515; GO:0016021; GO:0005886; GO:0046872; GO:0004222;
allko_ids K11749;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189940.1 1 422 evalue:8.9e-198 qcov:100.00 identity:83.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00595; PF13180; PF17820; PF02163;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Peptidase family M50;
pfam_id PDZ; PDZ_2; PDZ_6; Peptidase_M50;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:5.5e-07 score:29.1 best_domain_score:27.9 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:4.2e-09 score:35.8 best_domain_score:33.2 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:1e-12 score:47.0 best_domain_score:45.1 name:PDZ_6; db:Pfam-A.hmm|PF02163.22 evalue:1.9e-78 score:262.4 best_domain_score:262.1 name:Peptidase_M50;
sprot_desc Probable protease eep;
sprot_id sp|Q9RPP2|EEP_ENTFA;
sprot_target db:uniprot_sprot|sp|Q9RPP2|EEP_ENTFA 2 420 evalue:3.0e-112 qcov:99.30 identity:53.00;
tigrfam_acc TIGR00054;
tigrfam_desc RIP metalloprotease RseP;
tigrfam_mainrole Protein fate;
tigrfam_name TIGR00054;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00054 evalue:5.8e-91 score:304.6 best_domain_score:304.4 name:TIGR00054;
tm_num 5;
309110 310378 transmembrane_helix
ID metaerg.pl|00373
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o309122-309190i309635-309703o310022-310081i310142-310210o310289-310348i;
310403 312109 CDS
ID metaerg.pl|00374
allec_ids 6.1.1.15;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0002161; GO:0004827; GO:0006433;
allko_ids K01881;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189943.1 1 565 evalue:1.3e-273 qcov:99.50 identity:83.50;
kegg_pathway_id 00970; 00330;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Arginine and proline metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03129; PF00587; PF04073;
pfam_desc Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Aminoacyl-tRNA editing domain;
pfam_id HGTP_anticodon; tRNA-synt_2b; tRNA_edit;
pfam_target db:Pfam-A.hmm|PF03129.20 evalue:9.2e-20 score:69.9 best_domain_score:67.5 name:HGTP_anticodon; db:Pfam-A.hmm|PF00587.25 evalue:7.5e-59 score:197.9 best_domain_score:197.4 name:tRNA-synt_2b; db:Pfam-A.hmm|PF04073.15 evalue:2e-26 score:91.7 best_domain_score:90.9 name:tRNA_edit;
sprot_desc Proline--tRNA ligase;
sprot_id sp|Q831W7|SYP_ENTFA;
sprot_target db:uniprot_sprot|sp|Q831W7|SYP_ENTFA 1 567 evalue:5.6e-202 qcov:99.80 identity:61.90;
tigrfam_acc TIGR00409;
tigrfam_desc proline--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name proS_fam_II;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00409 evalue:6.5e-218 score:724.3 best_domain_score:724.1 name:TIGR00409;
312207 316538 CDS
ID metaerg.pl|00375
allec_ids 2.7.7.7;
allgo_ids GO:0006260; GO:0008408; GO:0005737; GO:0003677; GO:0003887; GO:0006261;
allko_ids K03763; K02323; K02342; K02337; K14162;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:2.7e-44 score:150.3 best_domain_score:149.0 name:DEDDh;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189946.1 1 1443 evalue:0.0e+00 qcov:100.00 identity:84.40;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF07733; PF14480; PF11490; PF17657; PF14579; PF02811; PF13482; PF00929;
pfam_desc Bacterial DNA polymerase III alpha NTPase domain; DNA polymerase III polC-type N-terminus I; DNA polymerase III polC-type N-terminus II; Bacterial DNA polymerase III alpha subunit finger domain; Helix-hairpin-helix motif; PHP domain; RNase_H superfamily; Exonuclease;
pfam_id DNA_pol3_alpha; DNA_pol3_a_NI; DNA_pol3_a_NII; DNA_pol3_finger; HHH_6; PHP; RNase_H_2; RNase_T;
pfam_target db:Pfam-A.hmm|PF07733.12 evalue:1.4e-62 score:210.9 best_domain_score:199.0 name:DNA_pol3_alpha; db:Pfam-A.hmm|PF14480.6 evalue:2.1e-16 score:58.9 best_domain_score:57.4 name:DNA_pol3_a_NI; db:Pfam-A.hmm|PF11490.8 evalue:8.3e-15 score:53.9 best_domain_score:53.9 name:DNA_pol3_a_NII; db:Pfam-A.hmm|PF17657.1 evalue:1e-23 score:82.7 best_domain_score:80.8 name:DNA_pol3_finger; db:Pfam-A.hmm|PF14579.6 evalue:4.2e-10 score:39.0 best_domain_score:37.7 name:HHH_6; db:Pfam-A.hmm|PF02811.19 evalue:2.5e-48 score:163.8 best_domain_score:162.4 name:PHP; db:Pfam-A.hmm|PF13482.6 evalue:2e-06 score:27.1 best_domain_score:23.1 name:RNase_H_2; db:Pfam-A.hmm|PF00929.24 evalue:1.6e-37 score:128.9 best_domain_score:127.8 name:RNase_T;
sprot_desc DNA polymerase III PolC-type;
sprot_id sp|Q88VK2|DPO3_LACPL;
sprot_target db:uniprot_sprot|sp|Q88VK2|DPO3_LACPL 1 1441 evalue:0.0e+00 qcov:99.90 identity:60.10;
tigrfam_acc TIGR00573; TIGR01405;
tigrfam_desc exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, alpha subunit, Gram-positive type;
tigrfam_mainrole DNA metabolism; DNA metabolism;
tigrfam_name dnaq; polC_Gram_pos;
tigrfam_sub1role Degradation of DNA; DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00573 evalue:3.3e-44 score:150.1 best_domain_score:148.9 name:TIGR00573; db:TIGRFAMs.hmm|TIGR01405 evalue:0 score:1850.7 best_domain_score:1850.4 name:TIGR01405;
316702 317172 CDS
ID metaerg.pl|00376
allgo_ids GO:0005737; GO:0042274;
allko_ids K09748;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091479034.1 1 156 evalue:2.2e-61 qcov:100.00 identity:73.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02576; PF17384;
pfam_desc RimP N-terminal domain; RimP C-terminal SH3 domain;
pfam_id DUF150; DUF150_C;
pfam_target db:Pfam-A.hmm|PF02576.17 evalue:3.9e-29 score:100.1 best_domain_score:98.9 name:DUF150; db:Pfam-A.hmm|PF17384.2 evalue:2.3e-15 score:55.7 best_domain_score:54.8 name:DUF150_C;
sprot_desc Ribosome maturation factor RimP;
sprot_id sp|Q835V2|RIMP_ENTFA;
sprot_target db:uniprot_sprot|sp|Q835V2|RIMP_ENTFA 2 156 evalue:1.7e-44 qcov:99.40 identity:52.90;
317210 318634 CDS
ID metaerg.pl|00377
allgo_ids GO:0003723; GO:0005829; GO:0003700; GO:0006353; GO:0031564;
allko_ids K02600;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478679.1 1 471 evalue:1.4e-215 qcov:99.40 identity:84.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF07650; PF13184; PF08529; PF00575;
pfam_desc KH domain; NusA-like KH domain; NusA N-terminal domain; S1 RNA binding domain;
pfam_id KH_2; KH_5; NusA_N; S1;
pfam_target db:Pfam-A.hmm|PF07650.17 evalue:2.7e-05 score:23.1 best_domain_score:18.3 name:KH_2; db:Pfam-A.hmm|PF13184.6 evalue:3e-32 score:109.8 best_domain_score:102.6 name:KH_5; db:Pfam-A.hmm|PF08529.11 evalue:1.3e-42 score:144.2 best_domain_score:144.2 name:NusA_N; db:Pfam-A.hmm|PF00575.23 evalue:2.7e-06 score:26.8 best_domain_score:24.3 name:S1;
sprot_desc Transcription termination/antitermination protein NusA;
sprot_id sp|P32727|NUSA_BACSU;
sprot_target db:uniprot_sprot|sp|P32727|NUSA_BACSU 1 372 evalue:1.9e-123 qcov:78.50 identity:61.80;
tigrfam_acc TIGR01953;
tigrfam_desc transcription termination factor NusA;
tigrfam_mainrole Transcription;
tigrfam_name NusA;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR01953 evalue:1.8e-130 score:434.0 best_domain_score:434.0 name:TIGR01953;
318659 318955 CDS
ID metaerg.pl|00378
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium subtropicum;
genomedb_acc GCF_900112455.1;
genomedb_target db:genomedb|GCF_900112455.1|WP_091528089.1 1 98 evalue:5.9e-36 qcov:100.00 identity:78.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF04296;
pfam_desc Protein of unknown function (DUF448);
pfam_id DUF448;
pfam_target db:Pfam-A.hmm|PF04296.13 evalue:2.5e-26 score:90.5 best_domain_score:90.3 name:DUF448;
318945 319244 CDS
ID metaerg.pl|00379
allgo_ids GO:0005840; GO:0003723;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478676.1 1 99 evalue:2.7e-36 qcov:100.00 identity:79.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01248;
pfam_desc Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;
pfam_id Ribosomal_L7Ae;
pfam_target db:Pfam-A.hmm|PF01248.26 evalue:2.2e-14 score:52.2 best_domain_score:52.0 name:Ribosomal_L7Ae;
sprot_desc Probable ribosomal protein in infB 5'region;
sprot_id sp|P55768|YLXQ_ENTFC;
sprot_target db:uniprot_sprot|sp|P55768|YLXQ_ENTFC 3 99 evalue:1.6e-16 qcov:98.00 identity:43.30;
319266 321650 CDS
ID metaerg.pl|00380
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0003743;
allko_ids K00956; K00860; K00955;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478674.1 1 794 evalue:0.0e+00 qcov:100.00 identity:81.80;
kegg_pathway_id 00920; 00450; 00230;
kegg_pathway_name Sulfur metabolism; Selenoamino acid metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00025; PF00009; PF11987; PF04760; PF01926; PF09439;
pfam_desc ADP-ribosylation factor family; Elongation factor Tu GTP binding domain; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; 50S ribosome-binding GTPase; Signal recognition particle receptor beta subunit;
pfam_id Arf; GTP_EFTU; IF-2; IF2_N; MMR_HSR1; SRPRB;
pfam_target db:Pfam-A.hmm|PF00025.21 evalue:1.7e-05 score:23.6 best_domain_score:19.3 name:Arf; db:Pfam-A.hmm|PF00009.27 evalue:5.4e-37 score:126.5 best_domain_score:120.8 name:GTP_EFTU; db:Pfam-A.hmm|PF11987.8 evalue:8.9e-38 score:127.9 best_domain_score:126.8 name:IF-2; db:Pfam-A.hmm|PF04760.15 evalue:5.4e-27 score:92.6 best_domain_score:53.2 name:IF2_N; db:Pfam-A.hmm|PF01926.23 evalue:1.4e-10 score:40.5 best_domain_score:38.5 name:MMR_HSR1; db:Pfam-A.hmm|PF09439.10 evalue:3.1e-05 score:22.7 best_domain_score:22.7 name:SRPRB;
sprot_desc Translation initiation factor IF-2;
sprot_id sp|P18311|IF2_ENTFC;
sprot_target db:uniprot_sprot|sp|P18311|IF2_ENTFC 200 793 evalue:1.5e-250 qcov:74.80 identity:72.90;
tigrfam_acc TIGR00231; TIGR00487;
tigrfam_desc small GTP-binding protein domain; translation initiation factor IF-2;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; IF-2;
tigrfam_sub1role General; Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:5.1e-38 score:129.6 best_domain_score:127.9 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00487 evalue:6e-262 score:869.8 best_domain_score:869.0 name:TIGR00487;
321678 322034 CDS
ID metaerg.pl|00381
allgo_ids GO:0006364; GO:0005737; GO:0030490;
allko_ids K02834;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091485682.1 1 118 evalue:3.3e-49 qcov:100.00 identity:85.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF02033;
pfam_desc Ribosome-binding factor A;
pfam_id RBFA;
pfam_target db:Pfam-A.hmm|PF02033.18 evalue:1.7e-30 score:104.8 best_domain_score:104.7 name:RBFA;
sprot_desc Ribosome-binding factor A;
sprot_id sp|Q03QT6|RBFA_LACBA;
sprot_target db:uniprot_sprot|sp|Q03QT6|RBFA_LACBA 1 112 evalue:5.3e-38 qcov:94.90 identity:69.60;
tigrfam_acc TIGR00082;
tigrfam_desc ribosome-binding factor A;
tigrfam_mainrole Transcription;
tigrfam_name rbfA;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR00082 evalue:7.6e-29 score:99.7 best_domain_score:99.6 name:TIGR00082;
322153 323076 CDS
ID metaerg.pl|00382
allec_ids 5.4.99.25;
allgo_ids GO:0006396; GO:0003723; GO:0106029; GO:0031119;
allko_ids K03177;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189967.1 1 305 evalue:8.9e-115 qcov:99.30 identity:65.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF16198; PF01509;
pfam_desc tRNA pseudouridylate synthase B C-terminal domain; TruB family pseudouridylate synthase (N terminal domain);
pfam_id TruB_C_2; TruB_N;
pfam_target db:Pfam-A.hmm|PF16198.5 evalue:5.8e-11 score:41.6 best_domain_score:40.5 name:TruB_C_2; db:Pfam-A.hmm|PF01509.18 evalue:8.2e-56 score:187.7 best_domain_score:187.1 name:TruB_N;
sprot_desc tRNA pseudouridine synthase B;
sprot_id sp|A8FDD4|TRUB_BACP2;
sprot_target db:uniprot_sprot|sp|A8FDD4|TRUB_BACP2 1 306 evalue:6.3e-83 qcov:99.70 identity:48.90;
tigrfam_acc TIGR00431;
tigrfam_desc tRNA pseudouridine(55) synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TruB;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00431 evalue:4.6e-75 score:251.0 best_domain_score:250.7 name:TIGR00431;
323080 324036 CDS
ID metaerg.pl|00383
allec_ids 2.7.1.26; 2.7.7.2; 2.7.1.26 2.7.7.2;
allgo_ids GO:0003919; GO:0009231; GO:0005524; GO:0008531; GO:0006747; GO:0009398;
allko_ids K11753;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189970.1 1 318 evalue:1.4e-155 qcov:100.00 identity:81.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY66-366; PWY-6167; RIBOSYN2-PWY; PWY-6168;
metacyc_pathway_name flavin biosynthesis IV (mammalian);; flavin biosynthesis II (archaea);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis III (fungi);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF06574; PF01687;
pfam_desc FAD synthetase; Riboflavin kinase;
pfam_id FAD_syn; Flavokinase;
pfam_target db:Pfam-A.hmm|PF06574.12 evalue:1.8e-45 score:153.9 best_domain_score:152.9 name:FAD_syn; db:Pfam-A.hmm|PF01687.17 evalue:1.9e-35 score:120.8 best_domain_score:119.5 name:Flavokinase;
sprot_desc Bifunctional riboflavin kinase/FMN adenylyltransferase;
sprot_id sp|P54575|RIBC_BACSU;
sprot_target db:uniprot_sprot|sp|P54575|RIBC_BACSU 1 314 evalue:3.0e-64 qcov:98.70 identity:42.60;
tigrfam_acc TIGR00083;
tigrfam_desc riboflavin biosynthesis protein RibF;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribF;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00083 evalue:1.6e-81 score:273.1 best_domain_score:272.9 name:TIGR00083;
324164 325192 CDS
ID metaerg.pl|00384
allgo_ids GO:0003677; GO:0006355; GO:0045892;
allko_ids K03705;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189972.1 1 342 evalue:5.0e-159 qcov:100.00 identity:82.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01628; PF03444;
pfam_desc HrcA protein C terminal domain; Winged helix-turn-helix transcription repressor, HrcA DNA-binding;
pfam_id HrcA; HrcA_DNA-bdg;
pfam_target db:Pfam-A.hmm|PF01628.21 evalue:2.9e-51 score:173.7 best_domain_score:173.3 name:HrcA; db:Pfam-A.hmm|PF03444.15 evalue:2.4e-09 score:35.9 best_domain_score:28.9 name:HrcA_DNA-bdg;
sprot_desc Heat-inducible transcription repressor HrcA;
sprot_id sp|Q38W91|HRCA_LACSS;
sprot_target db:uniprot_sprot|sp|Q38W91|HRCA_LACSS 1 342 evalue:5.2e-86 qcov:100.00 identity:44.50;
tigrfam_acc TIGR00331;
tigrfam_desc heat-inducible transcription repressor HrcA;
tigrfam_mainrole Regulatory functions;
tigrfam_name hrcA;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00331 evalue:3.6e-90 score:302.1 best_domain_score:301.9 name:TIGR00331;
325215 325787 CDS
ID metaerg.pl|00385
allgo_ids GO:0000774; GO:0006457; GO:0042803; GO:0051087; GO:0005737;
allko_ids K03687;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478666.1 1 190 evalue:3.4e-64 qcov:100.00 identity:73.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01025;
pfam_desc GrpE;
pfam_id GrpE;
pfam_target db:Pfam-A.hmm|PF01025.19 evalue:3.6e-49 score:165.8 best_domain_score:165.4 name:GrpE;
sprot_desc hypothetical protein;
sprot_id sp|Q835R8|GRPE_ENTFA;
sprot_target db:uniprot_sprot|sp|Q835R8|GRPE_ENTFA 39 188 evalue:6.3e-33 qcov:78.90 identity:47.30;
325818 327656 CDS
ID metaerg.pl|00386
allgo_ids GO:0000902; GO:0005524; GO:0051082; GO:0006457;
allko_ids K04043;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478665.1 1 612 evalue:0.0e+00 qcov:100.00 identity:94.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00012; PF06723;
pfam_desc Hsp70 protein; MreB/Mbl protein;
pfam_id HSP70; MreB_Mbl;
pfam_target db:Pfam-A.hmm|PF00012.20 evalue:4.4e-248 score:823.6 best_domain_score:732.4 name:HSP70; db:Pfam-A.hmm|PF06723.13 evalue:1.4e-16 score:59.4 best_domain_score:59.4 name:MreB_Mbl;
sprot_desc Chaperone protein DnaK;
sprot_id sp|Q65H54|DNAK_BACLD;
sprot_target db:uniprot_sprot|sp|Q65H54|DNAK_BACLD 1 577 evalue:1.1e-264 qcov:94.30 identity:82.10;
tigrfam_acc TIGR02350;
tigrfam_desc chaperone protein DnaK;
tigrfam_mainrole Protein fate;
tigrfam_name prok_dnaK;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR02350 evalue:3.7e-284 score:942.8 best_domain_score:940.5 name:TIGR02350;
327811 328977 CDS
ID metaerg.pl|00387
allgo_ids GO:0031072; GO:0051082; GO:0005737; GO:0005524; GO:0008270; GO:0006260; GO:0006457; GO:0009408;
allko_ids K09510; K00428; K00122; K03686;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478663.1 1 388 evalue:4.6e-201 qcov:100.00 identity:89.90;
kegg_pathway_id 00680; 00630;
kegg_pathway_name Methane metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00226; PF01556; PF00684;
pfam_desc DnaJ domain; DnaJ C terminal domain; DnaJ central domain;
pfam_id DnaJ; DnaJ_C; DnaJ_CXXCXGXG;
pfam_target db:Pfam-A.hmm|PF00226.31 evalue:1.7e-27 score:94.6 best_domain_score:93.7 name:DnaJ; db:Pfam-A.hmm|PF01556.18 evalue:1.5e-41 score:141.1 best_domain_score:140.4 name:DnaJ_C; db:Pfam-A.hmm|PF00684.19 evalue:5.1e-15 score:54.8 best_domain_score:53.8 name:DnaJ_CXXCXGXG;
sprot_desc Chaperone protein DnaJ;
sprot_id sp|Q835R5|DNAJ_ENTFA;
sprot_target db:uniprot_sprot|sp|Q835R5|DNAJ_ENTFA 1 388 evalue:1.1e-121 qcov:100.00 identity:66.10;
tigrfam_acc TIGR02349;
tigrfam_desc chaperone protein DnaJ;
tigrfam_name DnaJ_bact;
tigrfam_target db:TIGRFAMs.hmm|TIGR02349 evalue:2.6e-139 score:463.7 best_domain_score:463.5 name:TIGR02349;
329174 330997 CDS
ID metaerg.pl|00388
allec_ids 3.6.5.n1; 3.6.5.-;
allgo_ids GO:0003924; GO:0005525; GO:0005886; GO:0043022; GO:0003746; GO:0045727;
allko_ids K00958; K00955; K03018; K13811; K00390; K00956; K00860; K03596;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478661.1 1 607 evalue:0.0e+00 qcov:100.00 identity:94.90;
kegg_pathway_id 00230; 03020; 00450; 00920;
kegg_pathway_name Purine metabolism; RNA polymerase; Selenoamino acid metabolism; Sulfur metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00679; PF14492; PF00009; PF03144; PF06421;
pfam_desc Elongation factor G C-terminus; Elongation Factor G, domain II; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; GTP-binding protein LepA C-terminus;
pfam_id EFG_C; EFG_II; GTP_EFTU; GTP_EFTU_D2; LepA_C;
pfam_target db:Pfam-A.hmm|PF00679.24 evalue:1.6e-22 score:78.5 best_domain_score:77.3 name:EFG_C; db:Pfam-A.hmm|PF14492.6 evalue:1.2e-06 score:27.8 best_domain_score:26.5 name:EFG_II; db:Pfam-A.hmm|PF00009.27 evalue:1.7e-52 score:177.0 best_domain_score:175.9 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:1.7e-11 score:43.6 best_domain_score:42.0 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF06421.12 evalue:9.9e-49 score:163.2 best_domain_score:163.2 name:LepA_C;
sprot_desc Elongation factor 4;
sprot_id sp|Q831Z0|LEPA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q831Z0|LEPA_ENTFA 1 607 evalue:7.6e-282 qcov:100.00 identity:78.40;
tigrfam_acc TIGR00231; TIGR01393;
tigrfam_desc small GTP-binding protein domain; elongation factor 4;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name small_GTP; lepA;
tigrfam_sub1role General; General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:4.7e-18 score:64.7 best_domain_score:61.9 name:TIGR00231; db:TIGRFAMs.hmm|TIGR01393 evalue:0 score:1011.2 best_domain_score:1011.0 name:TIGR01393;
331154 332437 CDS
ID metaerg.pl|00389
allgo_ids GO:0009941; GO:0031969; GO:0016021; GO:0009536; GO:0050660;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478660.1 1 423 evalue:3.8e-204 qcov:99.10 identity:86.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF00571; PF03471; PF01595;
pfam_desc CBS domain; Transporter associated domain; Cyclin M transmembrane N-terminal domain;
pfam_id CBS; CorC_HlyC; DUF21;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:1.3e-10 score:40.8 best_domain_score:23.5 name:CBS; db:Pfam-A.hmm|PF03471.17 evalue:3.6e-16 score:58.2 best_domain_score:57.1 name:CorC_HlyC; db:Pfam-A.hmm|PF01595.20 evalue:3.7e-50 score:169.3 best_domain_score:168.5 name:DUF21;
sp YES;
sprot_desc DUF21 domain-containing protein At1g55930, chloroplastic;
sprot_id sp|Q84R21|Y1559_ARATH;
sprot_target db:uniprot_sprot|sp|Q84R21|Y1559_ARATH 10 391 evalue:4.5e-47 qcov:89.50 identity:32.60;
tm_num 4;
331154 331243 signal_peptide
ID metaerg.pl|00390
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
331154 332437 transmembrane_helix
ID metaerg.pl|00391
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology o331166-331225i331331-331399o331409-331477i331538-331591o;
332456 333079 CDS
ID metaerg.pl|00392
allec_ids 3.2.2.-;
allgo_ids GO:0003677; GO:0003905; GO:0006284;
allko_ids K03652;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848553.1 1 207 evalue:1.5e-70 qcov:100.00 identity:60.90;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5381; PWY-2681;
metacyc_pathway_name pyridine nucleotide cycling (plants);; trans-zeatin biosynthesis;;
metacyc_pathway_type NAD-Metabolism;; CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF02245;
pfam_desc Methylpurine-DNA glycosylase (MPG);
pfam_id Pur_DNA_glyco;
pfam_target db:Pfam-A.hmm|PF02245.16 evalue:2e-51 score:173.2 best_domain_score:172.9 name:Pur_DNA_glyco;
sprot_desc Putative 3-methyladenine DNA glycosylase;
sprot_id sp|Q49ZR8|3MGH_STAS1;
sprot_target db:uniprot_sprot|sp|Q49ZR8|3MGH_STAS1 11 202 evalue:9.9e-48 qcov:92.80 identity:48.50;
tigrfam_acc TIGR00567;
tigrfam_desc DNA-3-methyladenine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name 3mg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00567 evalue:2.7e-54 score:182.8 best_domain_score:182.5 name:TIGR00567;
333093 333644 CDS
ID metaerg.pl|00393
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478656.1 1 183 evalue:4.1e-75 qcov:100.00 identity:73.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF11217;
pfam_desc Protein of unknown function (DUF3013);
pfam_id DUF3013;
pfam_target db:Pfam-A.hmm|PF11217.8 evalue:1.8e-26 score:92.2 best_domain_score:92.2 name:DUF3013;
333622 334575 CDS
ID metaerg.pl|00394
allec_ids 2.1.1.-;
allgo_ids GO:0016429; GO:0030488; GO:0031515; GO:0005737; GO:0008276;
allko_ids K02687;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189994.1 1 317 evalue:1.3e-129 qcov:100.00 identity:73.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-5975; PWY-5864; PWY-5876; PWY-1061; PWY-1422; PWY-5305; PWYG-321; PWY-6113; PWY-5729; PWY-6442; PWY-6575; CODH-PWY; PWY-5467; PWY-6477; PWY-3542; ALL-CHORISMATE-PWY; PWY-6153; PWY-5041; PWY-4021; METHIONINE-DEG1-PWY; PWY-5328; PWY-5773; PWY-6519; CO2FORM-PWY; PWY-5116; PWY-1581; PWY-5987; PWY-5479; PWY-6292; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6146; PWY-6427; PWY-6395; PWY-6303; PWY-5857; PWY-5855; PWY-5209; PWY-6151; PWY-5856; PWY-6142; PWY-6154; UBISYN-PWY; PWY-6424; METH-ACETATE-PWY;
metacyc_pathway_name furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; magnoflorine biosynthesis;; homogalacturonan biosynthesis;; vitamin E biosynthesis (tocopherols);; bixin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; gramine biosynthesis;; gibberellin inactivation II (methylation);; choline biosynthesis II;; superpathway of chorismate metabolism;; autoinducer AI-2 biosynthesis I;; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; xanthohumol biosynthesis;; biotin biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; ubiquinol-9 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ; methanogenesis from acetate;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Autotrophic-CO2-Fixation;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Choline-Biosynthesis;; Super-Pathways;; Autoinducer-Biosynthesis;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; QUINONE-SYN;; LIGNAN-SYN;; CYSTEINE-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Autoinducer-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; ; METHANOGENESIS;;
pfam_acc PF08704; PF12847; PF02475; PF05175; PF06325;
pfam_desc tRNA methyltransferase complex GCD14 subunit; Methyltransferase domain; Met-10+ like-protein; Methyltransferase small domain; Ribosomal protein L11 methyltransferase (PrmA);
pfam_id GCD14; Methyltransf_18; Met_10; MTS; PrmA;
pfam_target db:Pfam-A.hmm|PF08704.10 evalue:3.3e-06 score:26.2 best_domain_score:25.6 name:GCD14; db:Pfam-A.hmm|PF12847.7 evalue:1.7e-08 score:33.8 best_domain_score:33.1 name:Methyltransf_18; db:Pfam-A.hmm|PF02475.16 evalue:1.1e-06 score:27.8 best_domain_score:27.0 name:Met_10; db:Pfam-A.hmm|PF05175.14 evalue:2.2e-13 score:49.3 best_domain_score:48.3 name:MTS; db:Pfam-A.hmm|PF06325.13 evalue:3.4e-93 score:311.5 best_domain_score:311.3 name:PrmA;
sprot_desc Ribosomal protein L11 methyltransferase;
sprot_id sp|A8FFD0|PRMA_BACP2;
sprot_target db:uniprot_sprot|sp|A8FFD0|PRMA_BACP2 4 312 evalue:1.1e-79 qcov:97.50 identity:48.90;
tigrfam_acc TIGR00406;
tigrfam_desc ribosomal protein L11 methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name prmA;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00406 evalue:2e-75 score:253.1 best_domain_score:252.9 name:TIGR00406;
334581 335249 CDS
ID metaerg.pl|00395
allec_ids 4.1.2.4;
allgo_ids GO:0016829; GO:0005737; GO:0004139; GO:0016052; GO:0009264; GO:0046386;
allko_ids K01619;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106189997.1 1 222 evalue:5.7e-103 qcov:100.00 identity:86.90;
kegg_pathway_id 00030;
kegg_pathway_name Pentose phosphate pathway;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY0-1298; PWY0-1297;
metacyc_pathway_name superpathway of pyrimidine deoxyribonucleosides degradation;; superpathway of purine deoxyribonucleosides degradation;;
metacyc_pathway_type Pyrimidine-Degradation; Super-Pathways;; NUCLEO-DEG; Super-Pathways;;
pfam_acc PF01791;
pfam_desc DeoC/LacD family aldolase;
pfam_id DeoC;
pfam_target db:Pfam-A.hmm|PF01791.9 evalue:5.5e-20 score:71.2 best_domain_score:71.0 name:DeoC;
sprot_desc Deoxyribose-phosphate aldolase;
sprot_id sp|A3CMP6|DEOC_STRSV;
sprot_target db:uniprot_sprot|sp|A3CMP6|DEOC_STRSV 3 222 evalue:2.4e-76 qcov:99.10 identity:64.50;
tigrfam_acc TIGR00126;
tigrfam_desc deoxyribose-phosphate aldolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name deoC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00126 evalue:3e-89 score:297.2 best_domain_score:297.0 name:TIGR00126;
335374 337602 CDS
ID metaerg.pl|00396
allec_ids 2.7.6.5;
allgo_ids GO:0015969; GO:0005524; GO:0005525; GO:0008728; GO:0016301; GO:0015970;
allko_ids K01139; K00951;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478652.1 8 742 evalue:0.0e+00 qcov:99.10 identity:90.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PPGPPMET-PWY;
metacyc_pathway_name ppGpp biosynthesis;;
metacyc_pathway_type Metabolic-Regulators;;
pfam_acc PF13291; PF01966; PF13328; PF04607; PF02824;
pfam_desc ACT domain; HD domain; HD domain; Region found in RelA / SpoT proteins; TGS domain;
pfam_id ACT_4; HD; HD_4; RelA_SpoT; TGS;
pfam_target db:Pfam-A.hmm|PF13291.6 evalue:5.3e-20 score:71.0 best_domain_score:69.7 name:ACT_4; db:Pfam-A.hmm|PF01966.22 evalue:4.6e-09 score:35.8 best_domain_score:34.2 name:HD; db:Pfam-A.hmm|PF13328.6 evalue:2e-53 score:179.5 best_domain_score:178.3 name:HD_4; db:Pfam-A.hmm|PF04607.17 evalue:5.7e-40 score:135.5 best_domain_score:135.5 name:RelA_SpoT; db:Pfam-A.hmm|PF02824.21 evalue:2.7e-20 score:71.4 best_domain_score:69.9 name:TGS;
sprot_desc GTP pyrophosphokinase;
sprot_id sp|O54408|RELA_BACSU;
sprot_target db:uniprot_sprot|sp|O54408|RELA_BACSU 13 740 evalue:2.2e-259 qcov:98.10 identity:59.00;
tigrfam_acc TIGR00691;
tigrfam_desc RelA/SpoT family protein;
tigrfam_mainrole Cellular processes;
tigrfam_name spoT_relA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00691 evalue:7.3e-254 score:843.4 best_domain_score:843.2 name:TIGR00691;
337628 338074 CDS
ID metaerg.pl|00397
allec_ids 3.1.1.96; 3.6.1.-;
allgo_ids GO:0002161; GO:0005737; GO:0051499; GO:0106026; GO:0043908; GO:0000049; GO:0019478;
allko_ids K07560;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091489294.1 1 148 evalue:3.6e-53 qcov:100.00 identity:71.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id PWY-6404; PWY-5354; PWY-6502; PWY-6147; PWY-6383; FOLSYN-PWY; ALL-CHORISMATE-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ; oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; ; Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;; Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF02580;
pfam_desc D-Tyr-tRNA(Tyr) deacylase;
pfam_id Tyr_Deacylase;
pfam_target db:Pfam-A.hmm|PF02580.16 evalue:2.2e-59 score:199.3 best_domain_score:199.2 name:Tyr_Deacylase;
sprot_desc D-aminoacyl-tRNA deacylase;
sprot_id sp|Q65GR0|DTD_BACLD;
sprot_target db:uniprot_sprot|sp|Q65GR0|DTD_BACLD 1 146 evalue:1.6e-44 qcov:98.60 identity:62.30;
tigrfam_acc TIGR00256;
tigrfam_desc D-tyrosyl-tRNA(Tyr) deacylase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00256;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00256 evalue:1.6e-61 score:206.2 best_domain_score:206.1 name:TIGR00256;
339494 338172 CDS
ID metaerg.pl|00398
allec_ids 3.5.1.28;
allgo_ids GO:0008745; GO:0009253; GO:0005618; GO:0005576; GO:0046872; GO:0071555;
allko_ids K01227; K01447; K13714; K01119; K08884; K01185; K09693; K01446; K07260; K01448; K08307;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190005.1 5 440 evalue:1.9e-163 qcov:99.10 identity:66.80;
kegg_pathway_id 00240; 00230; 02010; 00550; 01032;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; ABC transporters - General; Peptidoglycan biosynthesis; Glycan structures - degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01520; PF18348; PF08239; PF06347;
pfam_desc N-acetylmuramoyl-L-alanine amidase; Bacterial dipeptidyl-peptidase Sh3 domain; Bacterial SH3 domain; Bacterial SH3 domain;
pfam_id Amidase_3; SH3_16; SH3_3; SH3_4;
pfam_target db:Pfam-A.hmm|PF01520.18 evalue:1.8e-48 score:164.2 best_domain_score:163.4 name:Amidase_3; db:Pfam-A.hmm|PF18348.1 evalue:1.9e-07 score:30.0 best_domain_score:15.5 name:SH3_16; db:Pfam-A.hmm|PF08239.11 evalue:8e-39 score:131.0 best_domain_score:51.0 name:SH3_3; db:Pfam-A.hmm|PF06347.13 evalue:2.6e-15 score:55.2 best_domain_score:19.5 name:SH3_4;
sp YES;
sprot_desc Putative N-acetylmuramoyl-L-alanine amidase YrvJ;
sprot_id sp|O32041|YRVJ_BACSU;
sprot_target db:uniprot_sprot|sp|O32041|YRVJ_BACSU 34 439 evalue:9.7e-45 qcov:92.30 identity:26.80;
tm_num 1;
338172 338270 signal_peptide
ID metaerg.pl|00399
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
339494 338172 transmembrane_helix
ID metaerg.pl|00400
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
topology i338208-338267o;
339985 341292 CDS
ID metaerg.pl|00401
allec_ids 6.1.1.21;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004821; GO:0006427;
allko_ids K01892;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190007.1 1 428 evalue:8.3e-199 qcov:98.40 identity:80.40;
kegg_pathway_id 00340; 00970;
kegg_pathway_name Histidine metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03129; PF00587; PF01409; PF13393;
pfam_desc Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); tRNA synthetases class II core domain (F); Histidyl-tRNA synthetase;
pfam_id HGTP_anticodon; tRNA-synt_2b; tRNA-synt_2d; tRNA-synt_His;
pfam_target db:Pfam-A.hmm|PF03129.20 evalue:3e-14 score:52.2 best_domain_score:51.2 name:HGTP_anticodon; db:Pfam-A.hmm|PF00587.25 evalue:4.7e-18 score:65.0 best_domain_score:59.4 name:tRNA-synt_2b; db:Pfam-A.hmm|PF01409.20 evalue:7.3e-07 score:28.1 best_domain_score:19.7 name:tRNA-synt_2d; db:Pfam-A.hmm|PF13393.6 evalue:5.9e-46 score:156.4 best_domain_score:155.8 name:tRNA-synt_His;
sprot_desc Histidine--tRNA ligase;
sprot_id sp|Q1WTV0|SYH_LACS1;
sprot_target db:uniprot_sprot|sp|Q1WTV0|SYH_LACS1 1 419 evalue:2.1e-148 qcov:96.30 identity:59.80;
tigrfam_acc TIGR00442;
tigrfam_desc histidine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name hisS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00442 evalue:1.7e-153 score:510.5 best_domain_score:510.3 name:TIGR00442;
341294 343075 CDS
ID metaerg.pl|00402
allec_ids 6.1.1.12; 6.1.1.-;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004815; GO:0003676; GO:0006422;
allko_ids K01876;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190010.1 1 593 evalue:3.1e-289 qcov:100.00 identity:83.50;
kegg_pathway_id 00970; 00252;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Alanine and aspartate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
metacyc_pathway_id TRNA-CHARGING-PWY; PWY490-4;
metacyc_pathway_name tRNA charging;; L-asparagine biosynthesis III (tRNA-dependent);;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;; ASPARAGINE-SYN; Aminoacyl-tRNAs-Charging;;
pfam_acc PF02938; PF00152; PF01336;
pfam_desc GAD domain; tRNA synthetases class II (D, K and N) ; OB-fold nucleic acid binding domain;
pfam_id GAD; tRNA-synt_2; tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF02938.14 evalue:1.8e-30 score:104.3 best_domain_score:103.3 name:GAD; db:Pfam-A.hmm|PF00152.20 evalue:3.4e-109 score:364.0 best_domain_score:363.7 name:tRNA-synt_2; db:Pfam-A.hmm|PF01336.25 evalue:1.3e-17 score:62.7 best_domain_score:61.8 name:tRNA_anti-codon;
sprot_desc Aspartate--tRNA ligase;
sprot_id sp|Q833I2|SYD_ENTFA;
sprot_target db:uniprot_sprot|sp|Q833I2|SYD_ENTFA 2 590 evalue:1.6e-220 qcov:99.30 identity:63.30;
tigrfam_acc TIGR00459;
tigrfam_desc aspartate--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name aspS_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00459 evalue:5.6e-242 score:803.4 best_domain_score:803.2 name:TIGR00459;
343077 343976 CDS
ID metaerg.pl|00403
allec_ids 3.1.21.2;
allgo_ids GO:0008833; GO:0003677; GO:0008270; GO:0006281;
allko_ids K01151;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091264286.1 1 299 evalue:1.1e-144 qcov:100.00 identity:85.60;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF01261;
pfam_desc Xylose isomerase-like TIM barrel;
pfam_id AP_endonuc_2;
pfam_target db:Pfam-A.hmm|PF01261.24 evalue:1.6e-35 score:121.7 best_domain_score:121.5 name:AP_endonuc_2;
sprot_desc Probable endonuclease 4;
sprot_id sp|Q834D0|END4_ENTFA;
sprot_target db:uniprot_sprot|sp|Q834D0|END4_ENTFA 2 296 evalue:1.0e-122 qcov:98.70 identity:73.90;
tigrfam_acc TIGR00587;
tigrfam_desc apurinic endonuclease (APN1);
tigrfam_mainrole DNA metabolism;
tigrfam_name nfo;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00587 evalue:1.8e-95 score:318.5 best_domain_score:318.2 name:TIGR00587;
344090 344770 CDS
ID metaerg.pl|00404
allec_ids 5.1.99.6;
allgo_ids GO:0046872; GO:0052856; GO:0000166;
allko_ids K17759;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190014.1 1 219 evalue:4.6e-60 qcov:96.90 identity:55.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF03853;
pfam_desc YjeF-related protein N-terminus;
pfam_id YjeF_N;
pfam_target db:Pfam-A.hmm|PF03853.15 evalue:8.7e-42 score:142.1 best_domain_score:141.9 name:YjeF_N;
sprot_desc NAD(P)H-hydrate epimerase;
sprot_id sp|Q03NP0|NNRE_LACBA;
sprot_target db:uniprot_sprot|sp|Q03NP0|NNRE_LACBA 1 214 evalue:4.0e-34 qcov:94.70 identity:40.00;
tigrfam_acc TIGR00197;
tigrfam_desc YjeF family N-terminal domain;
tigrfam_mainrole Unknown function;
tigrfam_name yjeF_nterm;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00197 evalue:1.3e-46 score:158.0 best_domain_score:157.7 name:TIGR00197;
344757 345692 CDS
ID metaerg.pl|00405
allgo_ids GO:0009976;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478641.1 2 311 evalue:4.1e-107 qcov:99.70 identity:59.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0410172; 38.3176; 2.36593; 0.00169206; 40.7262;
pfam_acc PF14249;
pfam_desc Tocopherol cyclase;
pfam_id Tocopherol_cycl;
pfam_target db:Pfam-A.hmm|PF14249.6 evalue:4.2e-14 score:51.7 best_domain_score:45.4 name:Tocopherol_cycl;
>Feature NODE_2_length_224354_cov_20.305
224 814 CDS
ID metaerg.pl|00406
allgo_ids GO:0006353;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF07498;
pfam_desc Rho termination factor, N-terminal domain;
pfam_id Rho_N;
pfam_target db:Pfam-A.hmm|PF07498.12 evalue:1.5e-09 score:36.8 best_domain_score:36.1 name:Rho_N;
825 2060 CDS
ID metaerg.pl|00407
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF13205;
pfam_desc Bacterial Ig-like domain;
pfam_id Big_5;
pfam_target db:Pfam-A.hmm|PF13205.6 evalue:7.7e-07 score:29.0 best_domain_score:21.7 name:Big_5;
2062 2637 CDS
ID metaerg.pl|00408
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
2642 4291 CDS
ID metaerg.pl|00409
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
4291 4926 CDS
ID metaerg.pl|00410
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
4979 6523 CDS
ID metaerg.pl|00411
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
6584 7222 CDS
ID metaerg.pl|00412
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Anoxybacillaceae;g__Parageobacillus;s__Parageobacillus galactosidasius;
genomedb_acc GCF_002217735.1;
genomedb_target db:genomedb|GCF_002217735.1|WP_089097207.1 11 182 evalue:6.3e-35 qcov:81.10 identity:42.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
7313 8494 CDS
ID metaerg.pl|00413
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00565;
pfam_desc Staphylococcal nuclease homologue;
pfam_id SNase;
pfam_target db:Pfam-A.hmm|PF00565.17 evalue:7.7e-19 score:67.4 best_domain_score:66.4 name:SNase;
8503 9444 CDS
ID metaerg.pl|00414
genomedb_OC d__Bacteria;p__Firmicutes_K;c__Alicyclobacillia;o__Alicyclobacillales;f__Alicyclobacillaceae;g__Alicyclobacillus_G;s__Alicyclobacillus_G shizuokensis;
genomedb_acc GCF_001552255.1;
genomedb_target db:genomedb|GCF_001552255.1|WP_067924197.1 14 252 evalue:1.7e-20 qcov:76.40 identity:29.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
9461 9937 CDS
ID metaerg.pl|00415
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Amphibacillaceae;g__Virgibacillus;s__Virgibacillus massiliensis;
genomedb_acc GCF_000723585.1;
genomedb_target db:genomedb|GCF_000723585.1|WP_038246658.1 32 150 evalue:3.2e-15 qcov:75.30 identity:36.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
10010 10534 CDS
ID metaerg.pl|00416
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
10552 16815 CDS
ID metaerg.pl|00417
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
16833 24590 CDS
ID metaerg.pl|00418
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
24620 32206 CDS
ID metaerg.pl|00419
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 1;
24620 32206 transmembrane_helix
ID metaerg.pl|00420
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology o31901-31969i;
32316 33458 CDS
ID metaerg.pl|00421
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF01551; PF18013;
pfam_desc Peptidase family M23; Phage tail lysozyme;
pfam_id Peptidase_M23; Phage_lysozyme2;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:1.1e-26 score:92.1 best_domain_score:89.2 name:Peptidase_M23; db:Pfam-A.hmm|PF18013.1 evalue:7.2e-34 score:116.1 best_domain_score:114.4 name:Phage_lysozyme2;
33474 34130 CDS
ID metaerg.pl|00422
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
34135 34488 CDS
ID metaerg.pl|00423
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
34503 34940 CDS
ID metaerg.pl|00424
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
34930 35442 CDS
ID metaerg.pl|00425
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
35444 36244 CDS
ID metaerg.pl|00426
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium;s__Clostridium baratii;
genomedb_acc GCF_000789395.1;
genomedb_target db:genomedb|GCF_000789395.1|WP_040113633.1 1 258 evalue:1.1e-17 qcov:97.00 identity:27.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF04865;
pfam_desc Baseplate J-like protein;
pfam_id Baseplate_J;
pfam_target db:Pfam-A.hmm|PF04865.14 evalue:2e-05 score:23.1 best_domain_score:22.4 name:Baseplate_J;
36259 37926 CDS
ID metaerg.pl|00427
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
37926 38153 CDS
ID metaerg.pl|00428
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 2;
37926 38153 transmembrane_helix
ID metaerg.pl|00429
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i37959-38018o38028-38096i;
38150 39199 CDS
ID metaerg.pl|00430
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
39212 41134 CDS
ID metaerg.pl|00431
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
41152 44391 CDS
ID metaerg.pl|00432
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
44445 46259 CDS
ID metaerg.pl|00433
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
46263 50627 CDS
ID metaerg.pl|00434
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
50624 50815 CDS
ID metaerg.pl|00435
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
50832 54707 CDS
ID metaerg.pl|00436
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
54829 60987 CDS
ID metaerg.pl|00437
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00754;
pfam_desc F5/8 type C domain;
pfam_id F5_F8_type_C;
pfam_target db:Pfam-A.hmm|PF00754.25 evalue:1.3e-13 score:50.4 best_domain_score:47.3 name:F5_F8_type_C;
61114 63189 CDS
ID metaerg.pl|00438
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF05895;
pfam_desc Siphovirus protein of unknown function (DUF859);
pfam_id DUF859;
pfam_target db:Pfam-A.hmm|PF05895.12 evalue:1e-33 score:116.0 best_domain_score:115.4 name:DUF859;
63183 63890 CDS
ID metaerg.pl|00439
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Halobacillaceae;g__Halobacillus_A;s__Halobacillus_A sp900240285;
genomedb_acc GCF_900240285.1;
genomedb_target db:genomedb|GCF_900240285.1|WP_101844208.1 3 180 evalue:1.1e-24 qcov:75.70 identity:38.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
64337 64660 CDS
ID metaerg.pl|00440
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
64687 65091 CDS
ID metaerg.pl|00441
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 4;
64687 65091 transmembrane_helix
ID metaerg.pl|00442
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i64741-64800o64843-64911i64930-64998o65026-65085i;
65088 65396 CDS
ID metaerg.pl|00443
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 1;
65088 65396 transmembrane_helix
ID metaerg.pl|00444
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology o65100-65168i;
65485 66801 CDS
ID metaerg.pl|00445
allgo_ids GO:0008745; GO:0009253;
allko_ids K01448;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF01520; PF05036;
pfam_desc N-acetylmuramoyl-L-alanine amidase; Sporulation related domain;
pfam_id Amidase_3; SPOR;
pfam_target db:Pfam-A.hmm|PF01520.18 evalue:4.6e-28 score:97.7 best_domain_score:93.4 name:Amidase_3; db:Pfam-A.hmm|PF05036.13 evalue:7.4e-14 score:51.1 best_domain_score:49.7 name:SPOR;
67196 67999 CDS
ID metaerg.pl|00446
allgo_ids GO:0005524;
genomedb_OC d__Viruses;no__dsDNA viruses, no RNA stage;o__Caudovirales;;
genomedb_acc GCF_002149605.1;
genomedb_target db:genomedb|GCF_002149605.1|YP_009151591.1 10 247 evalue:6.3e-40 qcov:89.10 identity:40.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF13245; PF13401; PF13604; PF02562; PF04851;
pfam_desc AAA domain; AAA domain; AAA domain; PhoH-like protein; Type III restriction enzyme, res subunit;
pfam_id AAA_19; AAA_22; AAA_30; PhoH; ResIII;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:1.5e-06 score:27.9 best_domain_score:26.6 name:AAA_19; db:Pfam-A.hmm|PF13401.6 evalue:1.2e-06 score:28.1 best_domain_score:27.2 name:AAA_22; db:Pfam-A.hmm|PF13604.6 evalue:5.6e-10 score:38.5 best_domain_score:36.5 name:AAA_30; db:Pfam-A.hmm|PF02562.16 evalue:1.3e-31 score:108.9 best_domain_score:108.3 name:PhoH; db:Pfam-A.hmm|PF04851.15 evalue:1.9e-06 score:27.2 best_domain_score:22.8 name:ResIII;
68060 68371 CDS
ID metaerg.pl|00447
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
68382 69152 CDS
ID metaerg.pl|00448
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
69154 70017 CDS
ID metaerg.pl|00449
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
70021 71220 CDS
ID metaerg.pl|00450
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
71231 73033 CDS
ID metaerg.pl|00451
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_G;g__Bacillus_A;s__Bacillus_A thuringiensis_S;
genomedb_acc GCF_000021305.1;
genomedb_target db:genomedb|GCF_000021305.1|WP_000042585.1 23 573 evalue:5.6e-20 qcov:91.80 identity:22.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
73023 75107 CDS
ID metaerg.pl|00452
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
75121 75888 CDS
ID metaerg.pl|00453
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
76031 77275 CDS
ID metaerg.pl|00454
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium_S;s__Clostridium_S felsineum;
genomedb_acc GCF_002006355.1;
genomedb_target db:genomedb|GCF_002006355.1|WP_077893125.1 3 409 evalue:7.0e-06 qcov:98.30 identity:20.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
77288 77686 CDS
ID metaerg.pl|00455
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Trichococcus;s__Trichococcus collinsii;
genomedb_acc GCF_900107505.1;
genomedb_target db:genomedb|GCF_900107505.1|WP_086986370.1 1 101 evalue:1.3e-14 qcov:76.50 identity:44.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF09682;
pfam_desc Bacteriophage holin of superfamily 6 (Holin_LLH);
pfam_id Phage_holin_6_1;
pfam_target db:Pfam-A.hmm|PF09682.10 evalue:9.6e-18 score:63.7 best_domain_score:63.4 name:Phage_holin_6_1;
tigrfam_acc TIGR01673;
tigrfam_desc phage holin, LL-H family;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name holin_LLH;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01673 evalue:2e-09 score:37.0 best_domain_score:36.7 name:TIGR01673;
tm_num 1;
77288 77686 transmembrane_helix
ID metaerg.pl|00456
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i77306-77359o;
78149 77790 CDS
ID metaerg.pl|00457
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
78446 78186 CDS
ID metaerg.pl|00458
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
sp YES;
78186 78260 signal_peptide
ID metaerg.pl|00459
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
78783 78523 CDS
ID metaerg.pl|00460
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
78974 78780 CDS
ID metaerg.pl|00461
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
79194 78967 CDS
ID metaerg.pl|00462
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
79708 79244 CDS
ID metaerg.pl|00463
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Trichococcus;s__Trichococcus collinsii;
genomedb_acc GCF_900107505.1;
genomedb_target db:genomedb|GCF_900107505.1|WP_086986774.1 3 149 evalue:1.1e-23 qcov:95.50 identity:42.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
80834 79719 CDS
ID metaerg.pl|00464
allgo_ids GO:0003678; GO:0005524; GO:0006260;
genomedb_OC d__Bacteria;p__Firmicutes_K;c__Alicyclobacillia;o__Alicyclobacillales;f__Alicyclobacillaceae;g__Alicyclobacillus_G;s__Alicyclobacillus_G shizuokensis;
genomedb_acc GCF_001552255.1;
genomedb_target db:genomedb|GCF_001552255.1|WP_067924198.1 26 369 evalue:2.8e-54 qcov:92.70 identity:37.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF03796;
pfam_desc DnaB-like helicase C terminal domain;
pfam_id DnaB_C;
pfam_target db:Pfam-A.hmm|PF03796.15 evalue:4.1e-15 score:55.0 best_domain_score:54.6 name:DnaB_C;
81940 80837 CDS
ID metaerg.pl|00465
genomedb_OC d__Viruses;no__dsDNA viruses, no RNA stage;o__Caudovirales;f__Myoviridae;no__unclassified Myoviridae;s__Bacillus phage 0305phi8-36;;
genomedb_acc GCF_000871045.1;
genomedb_target db:genomedb|GCF_000871045.1|YP_001429672.1 36 356 evalue:9.9e-36 qcov:87.50 identity:29.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF08708;
pfam_desc Primase C terminal 1 (PriCT-1);
pfam_id PriCT_1;
pfam_target db:Pfam-A.hmm|PF08708.11 evalue:1.1e-06 score:27.5 best_domain_score:26.6 name:PriCT_1;
82628 81906 CDS
ID metaerg.pl|00466
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
83659 82643 CDS
ID metaerg.pl|00467
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF04098;
pfam_desc Rad52/22 family double-strand break repair protein;
pfam_id Rad52_Rad22;
pfam_target db:Pfam-A.hmm|PF04098.15 evalue:2.1e-15 score:56.2 best_domain_score:55.0 name:Rad52_Rad22;
83852 84040 CDS
ID metaerg.pl|00468
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
84120 84941 CDS
ID metaerg.pl|00469
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
84955 85203 CDS
ID metaerg.pl|00470
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
85184 85393 CDS
ID metaerg.pl|00471
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
85432 85911 CDS
ID metaerg.pl|00472
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
85912 86556 CDS
ID metaerg.pl|00473
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
86546 86905 CDS
ID metaerg.pl|00474
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
86902 87381 CDS
ID metaerg.pl|00475
allec_ids 3.1.22.4;
allgo_ids GO:0004520; GO:0006281; GO:0006310; GO:0008821; GO:0000287; GO:0003676;
allko_ids K01159;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Fen-1247;s__Fen-1247 sp003136975;
genomedb_acc GCA_003136975.1;
genomedb_target db:genomedb|GCA_003136975.1|PLEG01000357.1_10 1 152 evalue:9.9e-09 qcov:95.60 identity:29.70;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF02075;
pfam_desc Crossover junction endodeoxyribonuclease RuvC;
pfam_id RuvC;
pfam_target db:Pfam-A.hmm|PF02075.17 evalue:3.6e-13 score:48.9 best_domain_score:48.6 name:RuvC;
sprot_desc Crossover junction endodeoxyribonuclease RuvC;
sprot_id sp|Q8Y233|RUVC_RALSO;
sprot_target db:uniprot_sprot|sp|Q8Y233|RUVC_RALSO 1 149 evalue:9.1e-09 qcov:93.70 identity:30.30;
87371 88147 CDS
ID metaerg.pl|00476
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF12645;
pfam_desc Helix-turn-helix domain;
pfam_id HTH_16;
pfam_target db:Pfam-A.hmm|PF12645.7 evalue:3.7e-06 score:26.1 best_domain_score:19.3 name:HTH_16;
88476 88192 CDS
ID metaerg.pl|00477
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
88804 88445 CDS
ID metaerg.pl|00478
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
89771 88869 CDS
ID metaerg.pl|00479
allgo_ids GO:0006355;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_A;g__Bacillus_V;s__Bacillus_V massiliosenegalensis;
genomedb_acc GCF_000311725.1;
genomedb_target db:genomedb|GCF_000311725.1|WP_019156920.1 4 225 evalue:3.5e-15 qcov:74.00 identity:29.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00196; PF13392; PF08279; PF13384; PF14493; PF02796; PF07638; PF04545; PF08281;
pfam_desc Bacterial regulatory proteins, luxR family; HNH endonuclease; HTH domain; Homeodomain-like domain; Helix-turn-helix domain; Helix-turn-helix domain of resolvase; ECF sigma factor; Sigma-70, region 4; Sigma-70, region 4;
pfam_id GerE; HNH_3; HTH_11; HTH_23; HTH_40; HTH_7; Sigma70_ECF; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:1.7e-11 score:42.8 best_domain_score:22.2 name:GerE; db:Pfam-A.hmm|PF13392.6 evalue:4.7e-06 score:25.5 best_domain_score:24.6 name:HNH_3; db:Pfam-A.hmm|PF08279.12 evalue:4.8e-06 score:25.7 best_domain_score:15.2 name:HTH_11; db:Pfam-A.hmm|PF13384.6 evalue:4e-08 score:32.1 best_domain_score:15.3 name:HTH_23; db:Pfam-A.hmm|PF14493.6 evalue:8.7e-07 score:28.6 best_domain_score:18.3 name:HTH_40; db:Pfam-A.hmm|PF02796.15 evalue:3.7e-06 score:26.1 best_domain_score:13.9 name:HTH_7; db:Pfam-A.hmm|PF07638.11 evalue:2.1e-05 score:23.7 best_domain_score:13.5 name:Sigma70_ECF; db:Pfam-A.hmm|PF04545.16 evalue:2.9e-06 score:25.9 best_domain_score:20.4 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:1e-13 score:49.9 best_domain_score:25.4 name:Sigma70_r4_2;
89995 89768 CDS
ID metaerg.pl|00480
genomedb_OC d__Viruses;no__dsDNA viruses, no RNA stage;o__Caudovirales;f__Myoviridae;g__P100virus;s__Listeria virus A511;;
genomedb_acc GCF_000871125.1;
genomedb_target db:genomedb|GCF_000871125.1|YP_001468628.1 5 69 evalue:9.4e-10 qcov:86.70 identity:43.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF12674;
pfam_desc Putative zinc ribbon domain;
pfam_id Zn_ribbon_2;
pfam_target db:Pfam-A.hmm|PF12674.7 evalue:7.7e-06 score:25.7 best_domain_score:25.5 name:Zn_ribbon_2;
91183 90242 CDS
ID metaerg.pl|00481
allgo_ids GO:0043565;
allko_ids K00891; K00820; K00517; K14260; K00558; K10907; K03041; K01486; K00012;
kegg_pathway_id 00903; 00251; 00040; 00530; 03020; 00626; 00271; 00520; 00500; 00361; 00940; 00400; 00230;
kegg_pathway_name Limonene and pinene degradation; Glutamate metabolism; Pentose and glucuronate interconversions; Aminosugars metabolism; RNA polymerase; Naphthalene and anthracene degradation; Methionine metabolism; Nucleotide sugars metabolism; Starch and sucrose metabolism; gamma-Hexachlorocyclohexane degradation; Phenylpropanoid biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF12844; PF01381; PF13560;
pfam_desc Helix-turn-helix domain; Helix-turn-helix; Helix-turn-helix domain;
pfam_id HTH_19; HTH_3; HTH_31;
pfam_target db:Pfam-A.hmm|PF12844.7 evalue:1e-18 score:66.3 best_domain_score:32.0 name:HTH_19; db:Pfam-A.hmm|PF01381.22 evalue:9.7e-24 score:82.4 best_domain_score:42.7 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:4.3e-21 score:74.3 best_domain_score:40.9 name:HTH_31;
tigrfam_acc TIGR03830;
tigrfam_desc putative zinc finger/helix-turn-helix protein, YgiT family;
tigrfam_name CxxCG_CxxCG_HTH;
tigrfam_target db:TIGRFAMs.hmm|TIGR03830 evalue:1.5e-17 score:62.8 best_domain_score:32.0 name:TIGR03830;
91497 91210 CDS
ID metaerg.pl|00482
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
91691 91500 CDS
ID metaerg.pl|00483
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
92104 91733 CDS
ID metaerg.pl|00484
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
92697 92104 CDS
ID metaerg.pl|00485
allec_ids 2.7.1.21;
allgo_ids GO:0004797; GO:0005524; GO:0005737; GO:0008270; GO:0071897;
allko_ids K00857;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Lactococcus;s__Lactococcus sp002492185;
genomedb_acc GCA_002492185.1;
genomedb_target db:genomedb|GCA_002492185.1|DKXK01000010.1_5 1 189 evalue:7.6e-67 qcov:95.90 identity:67.20;
kegg_pathway_id 00240; 00983;
kegg_pathway_name Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
metacyc_pathway_id PWY0-181; P1-PWY;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF00265;
pfam_desc Thymidine kinase;
pfam_id TK;
pfam_target db:Pfam-A.hmm|PF00265.18 evalue:1.6e-50 score:170.6 best_domain_score:170.4 name:TK;
sprot_desc Thymidine kinase;
sprot_id sp|Q9CHX5|KITH_LACLA;
sprot_target db:uniprot_sprot|sp|Q9CHX5|KITH_LACLA 1 188 evalue:2.6e-66 qcov:95.40 identity:63.80;
93585 92710 CDS
ID metaerg.pl|00486
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
93623 93967 CDS
ID metaerg.pl|00487
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
95160 94000 CDS
ID metaerg.pl|00488
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0005887; GO:0015210;
allko_ids K02824;
genomedb_OC d__Viruses;no__dsDNA viruses, no RNA stage;o__Caudovirales;f__Myoviridae;no__unclassified Myoviridae;s__Clostridium phage c-st;;
genomedb_acc GCF_000865225.1;
genomedb_target db:genomedb|GCF_000865225.1|YP_398521.1 1 385 evalue:1.4e-69 qcov:99.70 identity:38.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00860;
pfam_desc Permease family;
pfam_id Xan_ur_permease;
pfam_target db:Pfam-A.hmm|PF00860.20 evalue:1.7e-43 score:148.0 best_domain_score:148.0 name:Xan_ur_permease;
sprot_desc Probable uracil permease;
sprot_id sp|P45117|URAA_HAEIN;
sprot_target db:uniprot_sprot|sp|P45117|URAA_HAEIN 7 383 evalue:8.9e-34 qcov:97.70 identity:29.20;
tm_num 12;
95160 94000 transmembrane_helix
ID metaerg.pl|00489
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i94018-94077o94087-94155i94168-94221o94234-94302i94321-94389o94402-94470i94489-94548o94579-94647i94708-94767o94837-94905i94924-94992o95062-95130i;
95485 95174 CDS
ID metaerg.pl|00490
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 1;
95485 95174 transmembrane_helix
ID metaerg.pl|00491
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology o95183-95251i;
95752 95528 CDS
ID metaerg.pl|00492
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
95942 95727 CDS
ID metaerg.pl|00493
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
96207 95935 CDS
ID metaerg.pl|00494
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
96424 96197 CDS
ID metaerg.pl|00495
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
96800 96426 CDS
ID metaerg.pl|00496
allgo_ids GO:0043565;
allko_ids K10907; K03041; K14260;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF08667; PF13443; PF01381;
pfam_desc BetR domain; Cro/C1-type HTH DNA-binding domain; Helix-turn-helix;
pfam_id BetR; HTH_26; HTH_3;
pfam_target db:Pfam-A.hmm|PF08667.10 evalue:3.2e-05 score:23.2 best_domain_score:22.1 name:BetR; db:Pfam-A.hmm|PF13443.6 evalue:2e-10 score:40.2 best_domain_score:31.1 name:HTH_26; db:Pfam-A.hmm|PF01381.22 evalue:1.7e-07 score:30.4 best_domain_score:21.2 name:HTH_3;
97432 96845 CDS
ID metaerg.pl|00497
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Bacillales_F;f__Bacillaceae_M;g__Bacillus_BB;s__Bacillus_BB sp001884825;
genomedb_acc GCA_001884825.1;
genomedb_target db:genomedb|GCA_001884825.1|OJF17883.1 10 168 evalue:3.5e-08 qcov:81.50 identity:31.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
98201 97536 CDS
ID metaerg.pl|00498
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091488702.1 25 221 evalue:1.4e-53 qcov:89.10 identity:56.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
sp YES;
97536 97598 lipoprotein_signal_peptide
ID metaerg.pl|00499
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
98646 98275 CDS
ID metaerg.pl|00500
genomedb_OC d__Viruses;no__dsDNA viruses, no RNA stage;o__Caudovirales;f__Myoviridae;g__Silviavirus;s__Staphylococcus virus SA11;;
genomedb_acc GCF_000901915.1;
genomedb_target db:genomedb|GCF_000901915.1|YP_007005482.1 16 119 evalue:2.0e-12 qcov:84.60 identity:39.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00565;
pfam_desc Staphylococcal nuclease homologue;
pfam_id SNase;
pfam_target db:Pfam-A.hmm|PF00565.17 evalue:6.3e-07 score:29.1 best_domain_score:28.7 name:SNase;
99292 98741 CDS
ID metaerg.pl|00501
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
sp YES;
tm_num 1;
98741 98845 signal_peptide
ID metaerg.pl|00502
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
99292 98741 transmembrane_helix
ID metaerg.pl|00503
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i98801-98869o;
102093 99310 CDS
ID metaerg.pl|00504
allgo_ids GO:0003677; GO:0004519; GO:0030908;
allko_ids K01509; K08282;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus indicus;
genomedb_acc GCF_002198095.1;
genomedb_target db:genomedb|GCF_002198095.1|WP_088249746.1 102 910 evalue:2.4e-115 qcov:87.30 identity:34.30;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00271; PF05204; PF14528; PF04851; PF00176;
pfam_desc Helicase conserved C-terminal domain; Homing endonuclease; LAGLIDADG-like domain; Type III restriction enzyme, res subunit; SNF2 family N-terminal domain;
pfam_id Helicase_C; Hom_end; LAGLIDADG_3; ResIII; SNF2_N;
pfam_target db:Pfam-A.hmm|PF00271.31 evalue:1.2e-16 score:60.2 best_domain_score:55.8 name:Helicase_C; db:Pfam-A.hmm|PF05204.14 evalue:4.1e-06 score:26.2 best_domain_score:24.6 name:Hom_end; db:Pfam-A.hmm|PF14528.6 evalue:1.9e-09 score:36.9 best_domain_score:35.0 name:LAGLIDADG_3; db:Pfam-A.hmm|PF04851.15 evalue:8.5e-07 score:28.4 best_domain_score:27.2 name:ResIII; db:Pfam-A.hmm|PF00176.23 evalue:3.3e-36 score:123.9 best_domain_score:123.4 name:SNF2_N;
102324 102112 CDS
ID metaerg.pl|00505
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
102718 102317 CDS
ID metaerg.pl|00506
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
103397 102762 CDS
ID metaerg.pl|00507
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF11753;
pfam_desc Protein of unknwon function (DUF3310);
pfam_id DUF3310;
pfam_target db:Pfam-A.hmm|PF11753.8 evalue:4e-16 score:58.2 best_domain_score:56.8 name:DUF3310;
104538 103408 CDS
ID metaerg.pl|00508
allgo_ids GO:0003697; GO:0005524; GO:0006281; GO:0005737; GO:0003684; GO:0008094; GO:0006310; GO:0009432;
allko_ids K03553;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__CAG-1000;g__CAG-533;s__CAG-533 sp002438065;
genomedb_acc GCA_002438065.1;
genomedb_target db:genomedb|GCA_002438065.1|DJSP01000117.1_9 3 367 evalue:2.6e-68 qcov:97.10 identity:40.80;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF08423; PF00154;
pfam_desc Rad51; recA bacterial DNA recombination protein;
pfam_id Rad51; RecA;
pfam_target db:Pfam-A.hmm|PF08423.11 evalue:6.1e-10 score:38.0 best_domain_score:37.5 name:Rad51; db:Pfam-A.hmm|PF00154.21 evalue:3.3e-73 score:245.6 best_domain_score:245.2 name:RecA;
sprot_desc hypothetical protein;
sprot_id sp|Q5WFX1|RECA_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WFX1|RECA_BACSK 22 365 evalue:4.2e-65 qcov:91.50 identity:40.60;
104863 104540 CDS
ID metaerg.pl|00509
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
105354 104884 CDS
ID metaerg.pl|00510
allgo_ids GO:0003697;
genomedb_OC d__Bacteria;p__Planctomycetota;c__UBA1135;o__UBA1135;f__UBA1135;g__NORP165;s__NORP165 sp002400895;
genomedb_acc GCA_002400895.1;
genomedb_target db:genomedb|GCA_002400895.1|PCH76082.1 2 154 evalue:1.1e-07 qcov:98.10 identity:33.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00436;
pfam_desc Single-strand binding protein family;
pfam_id SSB;
pfam_target db:Pfam-A.hmm|PF00436.25 evalue:1.3e-11 score:43.7 best_domain_score:43.7 name:SSB;
106573 105461 CDS
ID metaerg.pl|00511
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
107103 106597 CDS
ID metaerg.pl|00512
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium_A;s__Carnobacterium_A alterfunditum;
genomedb_acc GCF_000744115.1;
genomedb_target db:genomedb|GCF_000744115.1|WP_034546861.1 2 161 evalue:5.9e-36 qcov:95.20 identity:53.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 4;
107103 106597 transmembrane_helix
ID metaerg.pl|00513
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i106657-106725o106777-106845i106882-106950o107008-107076i;
107503 107120 CDS
ID metaerg.pl|00514
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481475.1 1 127 evalue:4.2e-18 qcov:100.00 identity:42.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF14478;
pfam_desc Domain of unknown function (DUF4430);
pfam_id DUF4430;
pfam_target db:Pfam-A.hmm|PF14478.6 evalue:2.1e-15 score:56.3 best_domain_score:55.4 name:DUF4430;
sp YES;
tm_num 1;
107120 107203 signal_peptide
ID metaerg.pl|00515
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
107503 107120 transmembrane_helix
ID metaerg.pl|00516
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i107138-107206o;
107860 107609 CDS
ID metaerg.pl|00517
allgo_ids GO:0009055; GO:0015035; GO:0045454;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF05768; PF00462; PF00085; PF13098;
pfam_desc Glutaredoxin-like domain (DUF836); Glutaredoxin; Thioredoxin; Thioredoxin-like domain;
pfam_id DUF836; Glutaredoxin; Thioredoxin; Thioredoxin_2;
pfam_target db:Pfam-A.hmm|PF05768.14 evalue:2.7e-06 score:27.0 best_domain_score:26.8 name:DUF836; db:Pfam-A.hmm|PF00462.24 evalue:2e-05 score:23.9 best_domain_score:23.6 name:Glutaredoxin; db:Pfam-A.hmm|PF00085.20 evalue:3.4e-06 score:26.2 best_domain_score:25.8 name:Thioredoxin; db:Pfam-A.hmm|PF13098.6 evalue:3.4e-07 score:29.9 best_domain_score:15.4 name:Thioredoxin_2;
108181 107864 CDS
ID metaerg.pl|00518
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
108472 108236 CDS
ID metaerg.pl|00519
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
109013 108540 CDS
ID metaerg.pl|00520
genomedb_OC d__Viruses;no__dsDNA viruses, no RNA stage;o__Caudovirales;f__Siphoviridae;no__unclassified Siphoviridae;s__Brevibacillus phage Sundance;;
genomedb_acc GCF_001500375.1;
genomedb_target db:genomedb|GCF_001500375.1|YP_009194125.1 1 157 evalue:3.4e-09 qcov:100.00 identity:28.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
109218 109030 CDS
ID metaerg.pl|00521
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
109476 109264 CDS
ID metaerg.pl|00522
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
109773 109492 CDS
ID metaerg.pl|00523
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
110416 109796 CDS
ID metaerg.pl|00524
allgo_ids GO:0003824;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00574; PF00378;
pfam_desc Clp protease; Enoyl-CoA hydratase/isomerase;
pfam_id CLP_protease; ECH_1;
pfam_target db:Pfam-A.hmm|PF00574.23 evalue:1.8e-27 score:95.7 best_domain_score:95.4 name:CLP_protease; db:Pfam-A.hmm|PF00378.20 evalue:8.7e-08 score:31.0 best_domain_score:18.8 name:ECH_1;
111130 110813 CDS
ID metaerg.pl|00525
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
112545 111145 CDS
ID metaerg.pl|00526
allgo_ids GO:0006260; GO:0055114;
allko_ids K10807; K00525;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Erysipelothrix;s__Erysipelothrix sp002359085;
genomedb_acc GCA_002359085.1;
genomedb_target db:genomedb|GCA_002359085.1|DEQB01000070.1_9 2 466 evalue:1.7e-202 qcov:99.80 identity:73.90;
kegg_pathway_id 00230; 00240; 00480;
kegg_pathway_name Purine metabolism; Pyrimidine metabolism; Glutathione metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF02867;
pfam_desc Ribonucleotide reductase, barrel domain;
pfam_id Ribonuc_red_lgC;
pfam_target db:Pfam-A.hmm|PF02867.15 evalue:6e-10 score:37.5 best_domain_score:32.9 name:Ribonuc_red_lgC;
113686 112757 CDS
ID metaerg.pl|00527
allec_ids 1.17.4.2;
allgo_ids GO:0031419; GO:0000166; GO:0004748; GO:0008998; GO:0006260;
allko_ids K00527;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071847545.1 1 302 evalue:8.1e-132 qcov:97.70 identity:73.80;
kegg_pathway_id 00240; 00230;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF17975;
pfam_desc Ribonucleotide reductase alpha domain;
pfam_id RNR_Alpha;
pfam_target db:Pfam-A.hmm|PF17975.1 evalue:1.3e-30 score:105.1 best_domain_score:104.1 name:RNR_Alpha;
sprot_desc Adenosylcobalamin-dependent ribonucleoside-triphosphate reductase;
sprot_id sp|A8YW74|RTPR_LACH4;
sprot_target db:uniprot_sprot|sp|A8YW74|RTPR_LACH4 4 302 evalue:3.2e-26 qcov:96.80 identity:31.20;
113990 113760 CDS
ID metaerg.pl|00528
allgo_ids GO:0009055; GO:0015035; GO:0045454;
allko_ids K03981;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus_G;s__Lactobacillus_G ozensis;
genomedb_acc GCF_001435995.1;
genomedb_target db:genomedb|GCF_001435995.1|WP_056965695.1 1 73 evalue:3.0e-11 qcov:96.10 identity:43.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF05768; PF00462;
pfam_desc Glutaredoxin-like domain (DUF836); Glutaredoxin;
pfam_id DUF836; Glutaredoxin;
pfam_target db:Pfam-A.hmm|PF05768.14 evalue:4.4e-05 score:23.1 best_domain_score:22.8 name:DUF836; db:Pfam-A.hmm|PF00462.24 evalue:2.7e-15 score:55.6 best_domain_score:55.3 name:Glutaredoxin;
tigrfam_acc TIGR02194;
tigrfam_desc glutaredoxin-like protein NrdH;
tigrfam_name GlrX_NrdH;
tigrfam_target db:TIGRFAMs.hmm|TIGR02194 evalue:2e-25 score:87.9 best_domain_score:87.8 name:TIGR02194;
114425 114180 CDS
ID metaerg.pl|00529
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
114933 114604 CDS
ID metaerg.pl|00530
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
118531 114983 CDS
ID metaerg.pl|00531
allec_ids 2.7.7.7;
allgo_ids GO:0006260; GO:0008408; GO:0005737; GO:0003887; GO:0003676;
allko_ids K14162; K02337; K02323; K03763;
genomedb_OC d__Bacteria;p__Firmicutes_D;c__Proteinivoracia;o__Proteinivoracales;f__Proteinivoraceae;g__Anaerobranca;s__Anaerobranca gottschalkii;
genomedb_acc GCF_900111575.1;
genomedb_target db:genomedb|GCF_900111575.1|WP_091350942.1 194 1094 evalue:5.4e-192 qcov:76.20 identity:40.70;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF07733; PF17657; PF14579; PF02811;
pfam_desc Bacterial DNA polymerase III alpha NTPase domain; Bacterial DNA polymerase III alpha subunit finger domain; Helix-hairpin-helix motif; PHP domain;
pfam_id DNA_pol3_alpha; DNA_pol3_finger; HHH_6; PHP;
pfam_target db:Pfam-A.hmm|PF07733.12 evalue:1.5e-83 score:279.6 best_domain_score:277.9 name:DNA_pol3_alpha; db:Pfam-A.hmm|PF17657.1 evalue:6.6e-49 score:164.7 best_domain_score:163.5 name:DNA_pol3_finger; db:Pfam-A.hmm|PF14579.6 evalue:9e-18 score:63.6 best_domain_score:62.4 name:HHH_6; db:Pfam-A.hmm|PF02811.19 evalue:5.9e-35 score:120.3 best_domain_score:117.5 name:PHP;
sprot_desc DNA polymerase III subunit alpha;
sprot_id sp|O51526|DPO3A_BORBU;
sprot_target db:uniprot_sprot|sp|O51526|DPO3A_BORBU 154 1112 evalue:2.7e-174 qcov:81.10 identity:36.70;
tigrfam_acc TIGR00594;
tigrfam_desc DNA polymerase III, alpha subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name polc;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00594 evalue:2.4e-281 score:935.5 best_domain_score:849.3 name:TIGR00594;
119236 118592 CDS
ID metaerg.pl|00532
allgo_ids GO:0003676; GO:0004523;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF13456;
pfam_desc Reverse transcriptase-like;
pfam_id RVT_3;
pfam_target db:Pfam-A.hmm|PF13456.6 evalue:4.9e-11 score:41.8 best_domain_score:41.2 name:RVT_3;
120170 119226 CDS
ID metaerg.pl|00533
allgo_ids GO:0008641;
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Monoglobales;f__UBA1381;g__UBA4716;s__UBA4716 sp002438865;
genomedb_acc GCA_002438865.1;
genomedb_target db:genomedb|GCA_002438865.1|DJRJ01000091.1_3 28 253 evalue:6.7e-33 qcov:72.00 identity:37.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00899;
pfam_desc ThiF family;
pfam_id ThiF;
pfam_target db:Pfam-A.hmm|PF00899.21 evalue:3.1e-16 score:58.7 best_domain_score:58.4 name:ThiF;
120886 120173 CDS
ID metaerg.pl|00534
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
121716 120901 CDS
ID metaerg.pl|00535
allgo_ids GO:0004519;
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptostreptococcaceae;g__Tepidibacter;s__Tepidibacter formicigenes;
genomedb_acc GCF_900142235.1;
genomedb_target db:genomedb|GCF_900142235.1|WP_072886510.1 4 269 evalue:3.3e-20 qcov:98.20 identity:30.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF14528;
pfam_desc LAGLIDADG-like domain;
pfam_id LAGLIDADG_3;
pfam_target db:Pfam-A.hmm|PF14528.6 evalue:3.7e-10 score:39.2 best_domain_score:20.8 name:LAGLIDADG_3;
122639 122013 CDS
ID metaerg.pl|00536
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
123522 122665 CDS
ID metaerg.pl|00537
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF14460;
pfam_desc Prokaryotic E2 family D;
pfam_id Prok-E2_D;
pfam_target db:Pfam-A.hmm|PF14460.6 evalue:2.3e-12 score:46.1 best_domain_score:45.4 name:Prok-E2_D;
125639 123522 CDS
ID metaerg.pl|00538
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
126179 125658 CDS
ID metaerg.pl|00539
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
127047 126202 CDS
ID metaerg.pl|00540
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
128443 127070 CDS
ID metaerg.pl|00541
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
129293 128460 CDS
ID metaerg.pl|00542
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
129716 129366 CDS
ID metaerg.pl|00543
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
130133 129846 CDS
ID metaerg.pl|00544
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
131226 130312 CDS
ID metaerg.pl|00545
genomedb_OC d__Bacteria;p__Thermotogota;c__Thermotogae;o__Petrotogales;f__Petrotogaceae;g__Defluviitoga;s__Defluviitoga tunisiensis;
genomedb_acc GCF_000953715.1;
genomedb_target db:genomedb|GCF_000953715.1|WP_045088066.1 59 275 evalue:3.6e-07 qcov:71.40 identity:23.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
132601 131447 CDS
ID metaerg.pl|00546
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus;s__Staphylococcus microti;
genomedb_acc GCF_000934465.1;
genomedb_target db:genomedb|GCF_000934465.1|WP_044359265.1 108 380 evalue:3.6e-20 qcov:71.10 identity:26.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF10087;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2325);
pfam_id DUF2325;
pfam_target db:Pfam-A.hmm|PF10087.9 evalue:2.7e-10 score:39.5 best_domain_score:37.2 name:DUF2325;
133498 132686 CDS
ID metaerg.pl|00547
allgo_ids GO:0004553; GO:0009254; GO:0019867;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alloiococcus;s__Alloiococcus otitis;
genomedb_acc GCF_000315445.1;
genomedb_target db:genomedb|GCF_000315445.1|WP_003778464.1 74 270 evalue:5.8e-25 qcov:73.00 identity:42.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF06725;
pfam_desc 3D domain;
pfam_id 3D;
pfam_target db:Pfam-A.hmm|PF06725.11 evalue:7.4e-11 score:41.3 best_domain_score:40.4 name:3D;
sp YES;
132686 132751 signal_peptide
ID metaerg.pl|00548
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
133896 133630 CDS
ID metaerg.pl|00549
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
134169 133975 CDS
ID metaerg.pl|00550
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
134567 134169 CDS
ID metaerg.pl|00551
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 3;
134567 134169 transmembrane_helix
ID metaerg.pl|00552
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology o134196-134249i134361-134429o134487-134555i;
135261 134569 CDS
ID metaerg.pl|00553
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
135671 135453 CDS
ID metaerg.pl|00554
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
135922 135668 CDS
ID metaerg.pl|00555
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
136377 135919 CDS
ID metaerg.pl|00556
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
137536 136481 CDS
ID metaerg.pl|00557
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_A;g__Bacillus_W;s__Bacillus_W niacini_B;
genomedb_acc GCF_000759675.1;
genomedb_target db:genomedb|GCF_000759675.1|WP_045520382.1 3 345 evalue:3.6e-128 qcov:97.70 identity:63.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00723;
pfam_desc Glycosyl hydrolases family 15;
pfam_id Glyco_hydro_15;
pfam_target db:Pfam-A.hmm|PF00723.21 evalue:8.4e-18 score:63.6 best_domain_score:63.2 name:Glyco_hydro_15;
138130 137639 CDS
ID metaerg.pl|00558
allec_ids 3.6.1.23;
allgo_ids GO:0004170; GO:0046872; GO:0006226; GO:0046080;
allko_ids K01520;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__CAG-302;g__RUG705;s__RUG705 sp900321645;
genomedb_acc GCA_900321645.1;
genomedb_target db:genomedb|GCA_900321645.1|ONWZ01000088.1_7 1 161 evalue:6.7e-45 qcov:98.80 identity:55.90;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
metacyc_pathway_id PWY-6545; PWY0-166;
metacyc_pathway_name pyrimidine deoxyribonucleotides de novo biosynthesis III;; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);;
metacyc_pathway_type Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF00692;
pfam_desc dUTPase;
pfam_id dUTPase;
pfam_target db:Pfam-A.hmm|PF00692.19 evalue:4.1e-13 score:48.4 best_domain_score:34.1 name:dUTPase;
sprot_desc Deoxyuridine 5'-triphosphate nucleotidohydrolase;
sprot_id sp|Q9CJ30|DUT_LACLA;
sprot_target db:uniprot_sprot|sp|Q9CJ30|DUT_LACLA 1 163 evalue:9.2e-33 qcov:100.00 identity:45.50;
138427 138146 CDS
ID metaerg.pl|00559
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
138772 138488 CDS
ID metaerg.pl|00560
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
139333 138815 CDS
ID metaerg.pl|00561
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Jeotgalibacillaceae;g__Jeotgalibacillus;s__Jeotgalibacillus malaysiensis;
genomedb_acc GCF_000818095.1;
genomedb_target db:genomedb|GCF_000818095.1|WP_040109205.1 5 161 evalue:3.4e-15 qcov:91.30 identity:33.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
139899 139432 CDS
ID metaerg.pl|00562
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
140508 139918 CDS
ID metaerg.pl|00563
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:7.6e-09 score:35.1 best_domain_score:34.0 name:DEDDh;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_G;g__Bacillus_A;s__Bacillus_A cereus_O;
genomedb_acc GCF_000291355.1;
genomedb_target db:genomedb|GCF_000291355.1|WP_002124315.1 3 194 evalue:1.5e-51 qcov:98.00 identity:54.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF16473; PF00929;
pfam_desc 3' exoribonuclease, RNase T-like; Exonuclease;
pfam_id DUF5051; RNase_T;
pfam_target db:Pfam-A.hmm|PF16473.5 evalue:5.6e-32 score:110.3 best_domain_score:110.0 name:DUF5051; db:Pfam-A.hmm|PF00929.24 evalue:3.4e-05 score:23.7 best_domain_score:21.7 name:RNase_T;
141449 140505 CDS
ID metaerg.pl|00564
allec_ids 1.8.1.9;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0004791; GO:0019430;
allko_ids K00383; K00384; K00382;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000167.1_10 3 311 evalue:1.0e-81 qcov:98.40 identity:50.20;
kegg_pathway_id 00252; 00251; 00620; 00240; 00020; 00260; 00280; 00480; 00010;
kegg_pathway_name Alanine and aspartate metabolism; Glutamate metabolism; Pyruvate metabolism; Pyrimidine metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Valine, leucine and isoleucine degradation; Glutathione metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
metacyc_pathway_id THIOREDOX-PWY;
metacyc_pathway_name thioredoxin pathway;;
metacyc_pathway_type Reductants;;
pfam_acc PF00890; PF12831; PF01134; PF03486; PF13434; PF13450; PF00070; PF07992; PF13738; PF01946;
pfam_desc FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; HI0933-like protein; L-lysine 6-monooxygenase (NADPH-requiring); NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Thi4 family;
pfam_id FAD_binding_2; FAD_oxidored; GIDA; HI0933_like; K_oxygenase; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Thi4;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:3.4e-08 score:32.2 best_domain_score:28.6 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:1.1e-06 score:27.5 best_domain_score:26.9 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:3.1e-09 score:35.6 best_domain_score:20.5 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:5e-07 score:28.0 best_domain_score:19.6 name:HI0933_like; db:Pfam-A.hmm|PF13434.6 evalue:2.9e-06 score:25.9 best_domain_score:15.1 name:K_oxygenase; db:Pfam-A.hmm|PF13450.6 evalue:3e-07 score:29.8 best_domain_score:22.3 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:5.5e-15 score:54.9 best_domain_score:45.7 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:9.4e-42 score:142.5 best_domain_score:142.3 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:1.4e-29 score:102.5 best_domain_score:81.6 name:Pyr_redox_3; db:Pfam-A.hmm|PF01946.17 evalue:1.5e-06 score:26.9 best_domain_score:23.6 name:Thi4;
sprot_desc Thioredoxin reductase;
sprot_id sp|P80880|TRXB_BACSU;
sprot_target db:uniprot_sprot|sp|P80880|TRXB_BACSU 3 314 evalue:6.9e-77 qcov:99.40 identity:47.90;
141715 141461 CDS
ID metaerg.pl|00565
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
142205 141708 CDS
ID metaerg.pl|00566
allko_ids K08728;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Dolosigranulum;s__Dolosigranulum pigrum;
genomedb_acc GCF_000245815.1;
genomedb_target db:genomedb|GCF_000245815.1|WP_004636369.1 4 163 evalue:5.8e-52 qcov:97.00 identity:62.50;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF05014; PF15891;
pfam_desc Nucleoside 2-deoxyribosyltransferase; Nucleoside 2-deoxyribosyltransferase like;
pfam_id Nuc_deoxyrib_tr; Nuc_deoxyri_tr2;
pfam_target db:Pfam-A.hmm|PF05014.15 evalue:4e-20 score:71.4 best_domain_score:71.2 name:Nuc_deoxyrib_tr; db:Pfam-A.hmm|PF15891.5 evalue:2.8e-09 score:36.5 best_domain_score:35.9 name:Nuc_deoxyri_tr2;
144229 142241 CDS
ID metaerg.pl|00567
allec_ids 3.6.4.12;
allgo_ids GO:0005524; GO:0005737; GO:0004003; GO:0003677; GO:0006268;
allko_ids K03657;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Marinococcaceae;g__Alteribacillus;s__Alteribacillus persepolensis;
genomedb_acc GCF_900099605.1;
genomedb_target db:genomedb|GCF_900099605.1|WP_091273623.1 12 650 evalue:2.7e-108 qcov:96.50 identity:36.70;
kegg_pathway_id 03420; 03430;
kegg_pathway_name Nucleotide excision repair; Mismatch repair;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF13245; PF13604; PF00580; PF13361; PF13538; PF01443;
pfam_desc AAA domain; AAA domain; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain; UvrD-like helicase C-terminal domain; Viral (Superfamily 1) RNA helicase;
pfam_id AAA_19; AAA_30; UvrD-helicase; UvrD_C; UvrD_C_2; Viral_helicase1;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:2.8e-23 score:82.1 best_domain_score:81.1 name:AAA_19; db:Pfam-A.hmm|PF13604.6 evalue:2.1e-07 score:30.1 best_domain_score:21.6 name:AAA_30; db:Pfam-A.hmm|PF00580.21 evalue:3.8e-47 score:160.6 best_domain_score:158.2 name:UvrD-helicase; db:Pfam-A.hmm|PF13361.6 evalue:1.5e-64 score:217.9 best_domain_score:216.2 name:UvrD_C; db:Pfam-A.hmm|PF13538.6 evalue:3.2e-10 score:38.9 best_domain_score:37.5 name:UvrD_C_2; db:Pfam-A.hmm|PF01443.18 evalue:6.6e-05 score:22.0 best_domain_score:11.1 name:Viral_helicase1;
sprot_desc ATP-dependent DNA helicase PcrA;
sprot_id sp|Q5HN29|PCRA_STAEQ;
sprot_target db:uniprot_sprot|sp|Q5HN29|PCRA_STAEQ 15 659 evalue:3.9e-106 qcov:97.40 identity:36.20;
144498 144316 CDS
ID metaerg.pl|00568
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
144820 144488 CDS
ID metaerg.pl|00569
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
145023 144835 CDS
ID metaerg.pl|00570
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
145377 145036 CDS
ID metaerg.pl|00571
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
145760 145389 CDS
ID metaerg.pl|00572
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
146704 145907 CDS
ID metaerg.pl|00573
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
147553 146807 CDS
ID metaerg.pl|00574
allgo_ids GO:0016020; GO:0034257; GO:0034258; GO:0016021; GO:0005886; GO:0042802; GO:0070207;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium;s__Carnobacterium gallinarum;
genomedb_acc GCF_000744375.1;
genomedb_target db:genomedb|GCF_000744375.1|WP_034560428.1 7 232 evalue:3.3e-67 qcov:91.10 identity:57.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF04973;
pfam_desc Nicotinamide mononucleotide transporter;
pfam_id NMN_transporter;
pfam_target db:Pfam-A.hmm|PF04973.12 evalue:1.2e-48 score:164.7 best_domain_score:164.4 name:NMN_transporter;
sprot_desc Nicotinamide riboside transporter PnuC;
sprot_id sp|D2ZZC1|PNUC_NEIMU;
sprot_target db:uniprot_sprot|sp|D2ZZC1|PNUC_NEIMU 8 230 evalue:1.5e-47 qcov:89.90 identity:44.80;
tigrfam_acc TIGR01528;
tigrfam_desc nicotinamide mononucleotide transporter PnuC;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name NMN_trans_PnuC;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01528 evalue:1.6e-54 score:183.8 best_domain_score:183.5 name:TIGR01528;
tm_num 5;
147553 146807 transmembrane_helix
ID metaerg.pl|00575
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology o146927-146980i146999-147058o147212-147280i147365-147418o147431-147490i;
148741 147575 CDS
ID metaerg.pl|00576
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Amphibacillaceae;g__Amphibacillus_B;s__Amphibacillus_B marinus;
genomedb_acc GCF_900110345.1;
genomedb_target db:genomedb|GCF_900110345.1|WP_091494886.1 1 387 evalue:4.0e-128 qcov:99.70 identity:57.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF13521;
pfam_desc AAA domain;
pfam_id AAA_28;
pfam_target db:Pfam-A.hmm|PF13521.6 evalue:3.7e-22 score:78.6 best_domain_score:77.3 name:AAA_28;
tigrfam_acc TIGR00125;
tigrfam_desc cytidyltransferase-like domain;
tigrfam_name cyt_tran_rel;
tigrfam_target db:TIGRFAMs.hmm|TIGR00125 evalue:7.3e-08 score:31.6 best_domain_score:26.9 name:TIGR00125;
149554 148796 CDS
ID metaerg.pl|00577
allgo_ids GO:0016787;
allko_ids K01515; K00952; K08310; K03574; K01529; K13522;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_B;s__Enterococcus_B sp002140175;
genomedb_acc GCF_002140175.1;
genomedb_target db:genomedb|GCF_002140175.1|WP_086284617.1 2 251 evalue:4.5e-56 qcov:99.20 identity:45.10;
kegg_pathway_id 00760; 00230; 00790;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Purine metabolism; Folate biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:1.2e-14 score:53.7 best_domain_score:52.6 name:NUDIX;
150382 150161 CDS
ID metaerg.pl|00578
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
150870 150559 CDS
ID metaerg.pl|00579
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
150971 150898 tRNA
ID metaerg.pl|00580
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
name tRNA_???_aa;
152303 152221 tRNA
ID metaerg.pl|00581
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
name tRNA_Tyr_gta;
152593 152318 CDS
ID metaerg.pl|00582
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
153210 152878 CDS
ID metaerg.pl|00583
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
154109 153732 CDS
ID metaerg.pl|00584
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 2;
154109 153732 transmembrane_helix
ID metaerg.pl|00585
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i153735-153803o153813-153881i;
154834 154121 CDS
ID metaerg.pl|00586
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
155305 154880 CDS
ID metaerg.pl|00587
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
156023 155676 CDS
ID metaerg.pl|00588
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Bacillus_AR;s__Bacillus_AR clarkii;
genomedb_acc GCF_002019695.1;
genomedb_target db:genomedb|GCF_002019695.1|WP_078598614.1 2 99 evalue:1.3e-29 qcov:85.20 identity:62.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
157127 156036 CDS
ID metaerg.pl|00589
allgo_ids GO:0005524;
genomedb_OC d__Viruses;no__dsDNA viruses, no RNA stage;o__Caudovirales;f__Myoviridae;g__Tsarbombavirus;s__Bacillus virus BCP78;;
genomedb_acc GCF_000898735.1;
genomedb_target db:genomedb|GCF_000898735.1|YP_006907918.1 1 361 evalue:6.2e-99 qcov:99.40 identity:51.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00004;
pfam_desc ATPase family associated with various cellular activities (AAA);
pfam_id AAA;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:7.7e-06 score:25.6 best_domain_score:23.9 name:AAA;
157807 157124 CDS
ID metaerg.pl|00590
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
158711 158163 CDS
ID metaerg.pl|00591
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium_AC;s__Clostridium_AC tepidiprofundi;
genomedb_acc GCF_001594005.1;
genomedb_target db:genomedb|GCF_001594005.1|WP_084365001.1 8 180 evalue:2.4e-19 qcov:95.10 identity:35.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF14025;
pfam_desc Protein of unknown function (DUF4241);
pfam_id DUF4241;
pfam_target db:Pfam-A.hmm|PF14025.6 evalue:5.5e-10 score:39.1 best_domain_score:29.2 name:DUF4241;
159342 158944 CDS
ID metaerg.pl|00592
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Floricoccus;s__Floricoccus tropicus;
genomedb_acc GCF_001832905.1;
genomedb_target db:genomedb|GCF_001832905.1|WP_070792057.1 15 126 evalue:6.3e-33 qcov:84.80 identity:61.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
sp YES;
158944 159003 lipoprotein_signal_peptide
ID metaerg.pl|00593
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
159830 159369 CDS
ID metaerg.pl|00594
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
160191 159841 CDS
ID metaerg.pl|00595
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
sp YES;
159841 159888 lipoprotein_signal_peptide
ID metaerg.pl|00596
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
160502 160191 CDS
ID metaerg.pl|00597
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
160770 160516 CDS
ID metaerg.pl|00598
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
162634 161696 CDS
ID metaerg.pl|00599
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
162837 162631 CDS
ID metaerg.pl|00600
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
163857 163060 CDS
ID metaerg.pl|00601
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Listeriaceae;g__Listeria_A;s__Listeria_A newyorkensis;
genomedb_acc GCF_000766145.1;
genomedb_target db:genomedb|GCF_000766145.1|WP_036091335.1 1 265 evalue:6.4e-45 qcov:100.00 identity:38.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
164274 163888 CDS
ID metaerg.pl|00602
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
164672 164286 CDS
ID metaerg.pl|00603
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
164943 164650 CDS
ID metaerg.pl|00604
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
165185 164943 CDS
ID metaerg.pl|00605
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__Aerococcus;s__Aerococcus sp001809535;
genomedb_acc GCF_001809535.1;
genomedb_target db:genomedb|GCF_001809535.1|WP_070616888.1 7 72 evalue:7.0e-11 qcov:82.50 identity:49.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
165473 165204 CDS
ID metaerg.pl|00606
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
165861 165532 CDS
ID metaerg.pl|00607
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
166125 165928 CDS
ID metaerg.pl|00608
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 2;
166125 165928 transmembrane_helix
ID metaerg.pl|00609
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i165940-166008o166051-166119i;
166495 166139 CDS
ID metaerg.pl|00610
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
167076 166507 CDS
ID metaerg.pl|00611
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
167264 167073 CDS
ID metaerg.pl|00612
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
167496 167278 CDS
ID metaerg.pl|00613
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
167741 167499 CDS
ID metaerg.pl|00614
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 2;
167741 167499 transmembrane_helix
ID metaerg.pl|00615
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i167502-167561o167589-167657i;
168085 167735 CDS
ID metaerg.pl|00616
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
168371 168183 CDS
ID metaerg.pl|00617
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
168634 168437 CDS
ID metaerg.pl|00618
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
169544 168636 CDS
ID metaerg.pl|00619
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 1;
169544 168636 transmembrane_helix
ID metaerg.pl|00620
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i168654-168722o;
170117 169560 CDS
ID metaerg.pl|00621
allec_ids 2.5.1.17;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium gilvum;
genomedb_acc GCF_900109085.1;
genomedb_target db:genomedb|GCF_900109085.1|WP_091631732.1 1 185 evalue:1.8e-46 qcov:100.00 identity:51.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
metacyc_pathway_id P381-PWY; PWY-6268;
metacyc_pathway_name adenosylcobalamin biosynthesis II (aerobic);; adenosylcobalamin salvage from cobalamin;;
metacyc_pathway_type De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;; Cobamide-Salvage;;
pfam_acc PF01923;
pfam_desc Cobalamin adenosyltransferase;
pfam_id Cob_adeno_trans;
pfam_target db:Pfam-A.hmm|PF01923.18 evalue:9.6e-52 score:174.7 best_domain_score:174.5 name:Cob_adeno_trans;
tigrfam_acc TIGR00636;
tigrfam_desc ATP:cob(I)alamin adenosyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name PduO_Nterm;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00636 evalue:2.8e-49 score:166.3 best_domain_score:166.1 name:TIGR00636;
170375 170130 CDS
ID metaerg.pl|00622
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 2;
170375 170130 transmembrane_helix
ID metaerg.pl|00623
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i170163-170231o170274-170336i;
170655 171326 CDS
ID metaerg.pl|00624
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
171317 173746 CDS
ID metaerg.pl|00625
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF01391;
pfam_desc Collagen triple helix repeat (20 copies);
pfam_id Collagen;
pfam_target db:Pfam-A.hmm|PF01391.18 evalue:5.9e-79 score:259.0 best_domain_score:34.7 name:Collagen;
173761 175815 CDS
ID metaerg.pl|00626
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF13385;
pfam_desc Concanavalin A-like lectin/glucanases superfamily;
pfam_id Laminin_G_3;
pfam_target db:Pfam-A.hmm|PF13385.6 evalue:2.1e-15 score:56.4 best_domain_score:56.4 name:Laminin_G_3;
175840 176112 CDS
ID metaerg.pl|00627
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
176115 177872 CDS
ID metaerg.pl|00628
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF13385;
pfam_desc Concanavalin A-like lectin/glucanases superfamily;
pfam_id Laminin_G_3;
pfam_target db:Pfam-A.hmm|PF13385.6 evalue:1.1e-19 score:70.3 best_domain_score:42.1 name:Laminin_G_3;
177893 178663 CDS
ID metaerg.pl|00629
allko_ids K01183;
kegg_pathway_id 00530;
kegg_pathway_name Aminosugars metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
178957 178691 CDS
ID metaerg.pl|00630
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
179184 178960 CDS
ID metaerg.pl|00631
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
179665 179309 CDS
ID metaerg.pl|00632
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 2;
179665 179309 transmembrane_helix
ID metaerg.pl|00633
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i179321-179389o179447-179515i;
179987 181396 CDS
ID metaerg.pl|00634
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium gilvum;
genomedb_acc GCF_900109085.1;
genomedb_target db:genomedb|GCF_900109085.1|WP_091632513.1 22 469 evalue:2.3e-82 qcov:95.50 identity:40.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:5.9e-30 score:102.6 best_domain_score:101.6 name:Peptidase_M23;
sp YES;
179987 180088 signal_peptide
ID metaerg.pl|00635
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
182518 181598 CDS
ID metaerg.pl|00636
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
183138 182530 CDS
ID metaerg.pl|00637
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Lactobacillaceae;g__Lactobacillus_F;s__Lactobacillus_F xiangfangensis;
genomedb_acc GCF_001438845.1;
genomedb_target db:genomedb|GCF_001438845.1|WP_057707585.1 3 193 evalue:5.6e-33 qcov:94.60 identity:41.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:3.5e-06 score:26.9 best_domain_score:26.1 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:3.3e-07 score:29.9 best_domain_score:29.3 name:Metallophos_2;
sprot_desc hypothetical protein;
sprot_id sp|Q58840|Y1445_METJA;
sprot_target db:uniprot_sprot|sp|Q58840|Y1445_METJA 4 188 evalue:9.1e-14 qcov:91.60 identity:32.30;
183403 183149 CDS
ID metaerg.pl|00638
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
183634 183419 CDS
ID metaerg.pl|00639
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Paracaedibacterales;f__UBA11393;g__UBA11393;s__UBA11393 sp003542655;
genomedb_acc GCA_003542655.1;
genomedb_target db:genomedb|GCA_003542655.1|HCU06464.1 1 67 evalue:2.2e-16 qcov:94.40 identity:56.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
184071 183646 CDS
ID metaerg.pl|00640
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
184586 184083 CDS
ID metaerg.pl|00641
allec_ids 3.2.2.-;
allgo_ids GO:0016798; GO:0008152;
genomedb_OC d__Viruses;no__dsDNA viruses, no RNA stage;o__Caudovirales;f__Myoviridae;g__Kayvirus;s__Staphylococcus virus JD7;;
genomedb_acc GCF_000903675.1;
genomedb_target db:genomedb|GCF_000903675.1|YP_007112837.1 1 155 evalue:4.6e-33 qcov:92.80 identity:45.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
metacyc_pathway_id PWY-5381; PWY-2681;
metacyc_pathway_name pyridine nucleotide cycling (plants);; trans-zeatin biosynthesis;;
metacyc_pathway_type NAD-Metabolism;; CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF08719;
pfam_desc Domain of unknown function (DUF1768);
pfam_id DUF1768;
pfam_target db:Pfam-A.hmm|PF08719.11 evalue:7.1e-42 score:142.6 best_domain_score:142.3 name:DUF1768;
sprot_desc N-glycosidase R617;
sprot_id sp|Q5UR67|RIBX_MIMIV;
sprot_target db:uniprot_sprot|sp|Q5UR67|RIBX_MIMIV 7 157 evalue:9.5e-17 qcov:90.40 identity:33.30;
tigrfam_acc TIGR02464;
tigrfam_desc conserved hypothetical protein;
tigrfam_name ribofla_fusion;
tigrfam_target db:TIGRFAMs.hmm|TIGR02464 evalue:7.8e-43 score:145.5 best_domain_score:145.3 name:TIGR02464;
185626 184598 CDS
ID metaerg.pl|00642
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
186165 185641 CDS
ID metaerg.pl|00643
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
186642 186346 CDS
ID metaerg.pl|00644
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
187007 186654 CDS
ID metaerg.pl|00645
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
187222 187004 CDS
ID metaerg.pl|00646
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
187668 187234 CDS
ID metaerg.pl|00647
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF09643;
pfam_desc YopX protein;
pfam_id YopX;
pfam_target db:Pfam-A.hmm|PF09643.10 evalue:3.1e-07 score:29.7 best_domain_score:29.6 name:YopX;
187912 187658 CDS
ID metaerg.pl|00648
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
188127 187897 CDS
ID metaerg.pl|00649
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
188366 188154 CDS
ID metaerg.pl|00650
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
188750 188379 CDS
ID metaerg.pl|00651
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
189124 188765 CDS
ID metaerg.pl|00652
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Weeksellaceae;g__Chryseobacterium;s__Chryseobacterium indologenes_A;
genomedb_acc GCF_001295265.1;
genomedb_target db:genomedb|GCF_001295265.1|WP_062699334.1 3 116 evalue:8.4e-29 qcov:95.80 identity:58.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF10686;
pfam_desc YspA, cpYpsA-related SLOG family;
pfam_id YAcAr;
pfam_target db:Pfam-A.hmm|PF10686.9 evalue:2.8e-20 score:71.3 best_domain_score:70.7 name:YAcAr;
189504 189127 CDS
ID metaerg.pl|00653
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
189918 189517 CDS
ID metaerg.pl|00654
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
190138 189920 CDS
ID metaerg.pl|00655
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
190392 190180 CDS
ID metaerg.pl|00656
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
190969 190688 CDS
ID metaerg.pl|00657
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
191175 190972 CDS
ID metaerg.pl|00658
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 2;
191175 190972 transmembrane_helix
ID metaerg.pl|00659
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i190990-191058o191068-191136i;
191739 191515 CDS
ID metaerg.pl|00660
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
192239 191841 CDS
ID metaerg.pl|00661
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
192575 192255 CDS
ID metaerg.pl|00662
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
193014 192568 CDS
ID metaerg.pl|00663
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
193313 193056 CDS
ID metaerg.pl|00664
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
193566 193330 CDS
ID metaerg.pl|00665
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
194014 193580 CDS
ID metaerg.pl|00666
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
194430 194170 CDS
ID metaerg.pl|00667
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
194732 194445 CDS
ID metaerg.pl|00668
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
194930 194745 CDS
ID metaerg.pl|00669
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
195297 194947 CDS
ID metaerg.pl|00670
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
195692 195300 CDS
ID metaerg.pl|00671
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
195943 195689 CDS
ID metaerg.pl|00672
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
196209 195958 CDS
ID metaerg.pl|00673
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
196436 196224 CDS
ID metaerg.pl|00674
genomedb_OC d__Viruses;no__dsDNA viruses, no RNA stage;o__Caudovirales;f__Myoviridae;g__Bastillevirus;s__Bacillus virus Bastille;;
genomedb_acc GCF_000899475.1;
genomedb_target db:genomedb|GCF_000899475.1|YP_006907498.1 1 70 evalue:2.4e-15 qcov:100.00 identity:54.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
196671 196438 CDS
ID metaerg.pl|00675
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
196928 196689 CDS
ID metaerg.pl|00676
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
197303 196941 CDS
ID metaerg.pl|00677
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
197580 197335 CDS
ID metaerg.pl|00678
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
197907 197704 CDS
ID metaerg.pl|00679
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 2;
197907 197704 transmembrane_helix
ID metaerg.pl|00680
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology o197713-197769i197830-197898o;
198115 197921 CDS
ID metaerg.pl|00681
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 2;
198115 197921 transmembrane_helix
ID metaerg.pl|00682
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i197957-198025o198038-198097i;
199770 199486 CDS
ID metaerg.pl|00683
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
200103 199897 CDS
ID metaerg.pl|00684
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
200802 200260 CDS
ID metaerg.pl|00685
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
202897 201203 CDS
ID metaerg.pl|00686
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
205446 202963 CDS
ID metaerg.pl|00687
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
205972 205514 CDS
ID metaerg.pl|00688
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
207938 205992 CDS
ID metaerg.pl|00689
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF14284;
pfam_desc PcfJ-like protein;
pfam_id PcfJ;
pfam_target db:Pfam-A.hmm|PF14284.6 evalue:2.5e-16 score:59.1 best_domain_score:58.0 name:PcfJ;
208249 207989 CDS
ID metaerg.pl|00690
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
208497 208270 CDS
ID metaerg.pl|00691
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
208864 208523 CDS
ID metaerg.pl|00692
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
209671 209138 CDS
ID metaerg.pl|00693
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
210047 209736 CDS
ID metaerg.pl|00694
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
210495 210244 CDS
ID metaerg.pl|00695
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 2;
210495 210244 transmembrane_helix
ID metaerg.pl|00696
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology i210262-210330o210373-210441i;
210994 211770 CDS
ID metaerg.pl|00697
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Amphibacillaceae;g__Virgibacillus;s__Virgibacillus massiliensis;
genomedb_acc GCF_000723585.1;
genomedb_target db:genomedb|GCF_000723585.1|WP_038246722.1 34 222 evalue:4.6e-32 qcov:73.30 identity:36.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
211819 212151 CDS
ID metaerg.pl|00698
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
tm_num 1;
211819 212151 transmembrane_helix
ID metaerg.pl|00699
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
topology o211876-211944i;
212205 212840 CDS
ID metaerg.pl|00700
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
212855 213253 CDS
ID metaerg.pl|00701
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
sp YES;
212855 213004 signal_peptide
ID metaerg.pl|00702
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
213255 213710 CDS
ID metaerg.pl|00703
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
213850 215514 CDS
ID metaerg.pl|00704
allgo_ids GO:0004519;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Calothrix;s__Calothrix elsteri;
genomedb_acc GCF_002289455.1;
genomedb_target db:genomedb|GCF_002289455.1|WP_095721752.1 43 513 evalue:2.3e-36 qcov:85.00 identity:27.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF14890; PF14528;
pfam_desc Intein splicing domain; LAGLIDADG-like domain;
pfam_id Intein_splicing; LAGLIDADG_3;
pfam_target db:Pfam-A.hmm|PF14890.6 evalue:2.7e-18 score:65.5 best_domain_score:64.7 name:Intein_splicing; db:Pfam-A.hmm|PF14528.6 evalue:1.3e-07 score:31.0 best_domain_score:29.4 name:LAGLIDADG_3;
tigrfam_acc TIGR01443;
tigrfam_desc intein C-terminal splicing region;
tigrfam_name intein_Cterm;
tigrfam_target db:TIGRFAMs.hmm|TIGR01443 evalue:4.1e-05 score:22.8 best_domain_score:21.6 name:TIGR01443;
215566 215949 CDS
ID metaerg.pl|00705
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
216037 216240 CDS
ID metaerg.pl|00706
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
216304 217578 CDS
ID metaerg.pl|00707
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Paenibacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sp000732325;
genomedb_acc GCF_000732325.1;
genomedb_target db:genomedb|GCF_000732325.1|WP_052512176.1 1 424 evalue:2.1e-50 qcov:100.00 identity:31.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
217591 218904 CDS
ID metaerg.pl|00708
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
218911 220680 CDS
ID metaerg.pl|00709
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Anoxybacillaceae;g__Parageobacillus;s__Parageobacillus galactosidasius;
genomedb_acc GCF_002217735.1;
genomedb_target db:genomedb|GCF_002217735.1|WP_089097224.1 7 459 evalue:1.5e-81 qcov:76.90 identity:40.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
pfam_acc PF04860;
pfam_desc Phage portal protein;
pfam_id Phage_portal;
pfam_target db:Pfam-A.hmm|PF04860.12 evalue:5e-11 score:41.6 best_domain_score:41.1 name:Phage_portal;
220673 222073 CDS
ID metaerg.pl|00710
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
222103 223272 CDS
ID metaerg.pl|00711
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Paenibacillales;f__Paenibacillaceae;g__UNC496MF;s__UNC496MF sp900113915;
genomedb_acc GCF_900113915.1;
genomedb_target db:genomedb|GCF_900113915.1|WP_090646044.1 18 389 evalue:1.7e-14 qcov:95.60 identity:27.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
223324 224352 CDS
ID metaerg.pl|00712
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Paenibacillales;f__Paenibacillaceae;g__Paenibacillus;s__Paenibacillus sp000732325;
genomedb_acc GCF_000732325.1;
genomedb_target db:genomedb|GCF_000732325.1|WP_052512180.1 5 343 evalue:8.0e-80 qcov:98.80 identity:46.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.2628; ; 0.00323812; 34.2661; ;
>Feature NODE_3_length_206448_cov_46.9221
77 2146 CDS
ID metaerg.pl|00713
allec_ids 5.6.2.2; 5.99.1.2;
allgo_ids GO:0003677; GO:0003916; GO:0006265; GO:0005694; GO:0003917; GO:0046872;
allko_ids K02316; K03168;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583895.1 1 689 evalue:0.0e+00 qcov:100.00 identity:98.30;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01131; PF01751; PF01396;
pfam_desc DNA topoisomerase; Toprim domain; Topoisomerase DNA binding C4 zinc finger;
pfam_id Topoisom_bac; Toprim; zf-C4_Topoisom;
pfam_target db:Pfam-A.hmm|PF01131.20 evalue:1e-132 score:442.3 best_domain_score:441.8 name:Topoisom_bac; db:Pfam-A.hmm|PF01751.22 evalue:1.3e-29 score:101.7 best_domain_score:99.6 name:Toprim; db:Pfam-A.hmm|PF01396.19 evalue:8.1e-35 score:117.6 best_domain_score:59.1 name:zf-C4_Topoisom;
sprot_desc DNA topoisomerase 1;
sprot_id sp|Q9KA23|TOP1_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA23|TOP1_BACHD 1 689 evalue:0.0e+00 qcov:100.00 identity:76.80;
tigrfam_acc TIGR01051;
tigrfam_desc DNA topoisomerase I;
tigrfam_mainrole DNA metabolism;
tigrfam_name topA_bact;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01051 evalue:3.1e-257 score:854.8 best_domain_score:854.8 name:TIGR01051;
2724 3665 CDS
ID metaerg.pl|00714
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0005737; GO:0009037; GO:0007049; GO:0051301; GO:0007059; GO:0006313;
allko_ids K03733;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583894.1 21 313 evalue:5.1e-158 qcov:93.60 identity:98.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00589; PF02899; PF13495; PF13102;
pfam_desc Phage integrase family; Phage integrase, N-terminal SAM-like domain; Phage integrase, N-terminal SAM-like domain; Phage integrase SAM-like domain;
pfam_id Phage_integrase; Phage_int_SAM_1; Phage_int_SAM_4; Phage_int_SAM_5;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:3.3e-44 score:149.9 best_domain_score:149.1 name:Phage_integrase; db:Pfam-A.hmm|PF02899.17 evalue:4.4e-19 score:67.8 best_domain_score:67.8 name:Phage_int_SAM_1; db:Pfam-A.hmm|PF13495.6 evalue:4.1e-10 score:39.2 best_domain_score:37.0 name:Phage_int_SAM_4; db:Pfam-A.hmm|PF13102.6 evalue:4.9e-05 score:22.8 best_domain_score:21.3 name:Phage_int_SAM_5;
sprot_desc Tyrosine recombinase XerC;
sprot_id sp|Q9KA25|XERC_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA25|XERC_BACHD 18 313 evalue:1.5e-84 qcov:94.60 identity:52.60;
tigrfam_acc TIGR02224;
tigrfam_desc tyrosine recombinase XerC;
tigrfam_mainrole DNA metabolism;
tigrfam_name recomb_XerC;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02224 evalue:9e-104 score:346.1 best_domain_score:345.9 name:TIGR02224;
3683 4246 CDS
ID metaerg.pl|00715
allec_ids 3.4.25.2;
allgo_ids GO:0004298; GO:0005839; GO:0051603; GO:0009376; GO:0046872;
allko_ids K01419;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583893.1 1 187 evalue:4.8e-95 qcov:100.00 identity:98.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00227;
pfam_desc Proteasome subunit;
pfam_id Proteasome;
pfam_target db:Pfam-A.hmm|PF00227.26 evalue:5.4e-25 score:87.2 best_domain_score:86.4 name:Proteasome;
sprot_desc ATP-dependent protease subunit HslV;
sprot_id sp|A7GRG0|HSLV_BACCN;
sprot_target db:uniprot_sprot|sp|A7GRG0|HSLV_BACCN 9 179 evalue:8.3e-70 qcov:91.40 identity:77.30;
tigrfam_acc TIGR03692;
tigrfam_desc ATP-dependent protease HslVU, peptidase subunit;
tigrfam_mainrole Protein fate;
tigrfam_name ATP_dep_HslV;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR03692 evalue:5.8e-81 score:269.4 best_domain_score:269.2 name:TIGR03692;
4248 5648 CDS
ID metaerg.pl|00716
allgo_ids GO:0005524; GO:0009376; GO:0016887; GO:0070011; GO:0043335;
allko_ids K03667;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583892.1 1 466 evalue:1.8e-244 qcov:100.00 identity:98.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00004; PF07724; PF07728; PF10431;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); AAA domain (dynein-related subfamily); C-terminal, D2-small domain, of ClpB protein;
pfam_id AAA; AAA_2; AAA_5; ClpB_D2-small;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:7.3e-17 score:61.3 best_domain_score:30.6 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:1e-46 score:158.4 best_domain_score:133.2 name:AAA_2; db:Pfam-A.hmm|PF07728.14 evalue:4.2e-08 score:32.5 best_domain_score:24.6 name:AAA_5; db:Pfam-A.hmm|PF10431.9 evalue:1.2e-06 score:27.7 best_domain_score:26.4 name:ClpB_D2-small;
sprot_desc ATP-dependent protease ATPase subunit HslU;
sprot_id sp|Q9KA27|HSLU_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA27|HSLU_BACHD 1 466 evalue:9.0e-166 qcov:100.00 identity:69.80;
tigrfam_acc TIGR00390;
tigrfam_desc ATP-dependent protease HslVU, ATPase subunit;
tigrfam_mainrole Protein fate;
tigrfam_name hslU;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR00390 evalue:4.5e-197 score:654.5 best_domain_score:654.3 name:TIGR00390;
5670 6446 CDS
ID metaerg.pl|00717
allgo_ids GO:0003677; GO:0005525; GO:0005737; GO:0003700; GO:0045892;
allko_ids K03706;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583891.1 1 258 evalue:1.0e-132 qcov:100.00 identity:99.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF06018; PF08279; PF08222; PF02082;
pfam_desc CodY GAF-like domain; HTH domain; CodY helix-turn-helix domain; Transcriptional regulator;
pfam_id CodY; HTH_11; HTH_CodY; Rrf2;
pfam_target db:Pfam-A.hmm|PF06018.14 evalue:1.7e-82 score:274.4 best_domain_score:274.1 name:CodY; db:Pfam-A.hmm|PF08279.12 evalue:2.9e-06 score:26.3 best_domain_score:21.3 name:HTH_11; db:Pfam-A.hmm|PF08222.11 evalue:3.1e-38 score:128.4 best_domain_score:127.5 name:HTH_CodY; db:Pfam-A.hmm|PF02082.20 evalue:3.8e-05 score:23.2 best_domain_score:19.1 name:Rrf2;
sprot_desc GTP-sensing transcriptional pleiotropic repressor CodY;
sprot_id sp|Q9KA28|CODY_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA28|CODY_BACHD 1 255 evalue:2.3e-115 qcov:98.80 identity:84.30;
tigrfam_acc TIGR02787;
tigrfam_desc GTP-sensing transcriptional pleiotropic repressor CodY;
tigrfam_mainrole Regulatory functions;
tigrfam_name codY_Gpos;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02787 evalue:5.5e-127 score:421.3 best_domain_score:421.1 name:TIGR02787;
6614 7312 CDS
ID metaerg.pl|00718
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0015935;
allko_ids K02967;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583890.1 1 232 evalue:3.8e-126 qcov:100.00 identity:99.60;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00318;
pfam_desc Ribosomal protein S2;
pfam_id Ribosomal_S2;
pfam_target db:Pfam-A.hmm|PF00318.20 evalue:3.1e-102 score:339.6 best_domain_score:339.4 name:Ribosomal_S2;
sprot_desc 30S ribosomal protein S2;
sprot_id sp|Q9KA63|RS2_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA63|RS2_BACHD 1 232 evalue:1.4e-114 qcov:100.00 identity:84.00;
tigrfam_acc TIGR01011;
tigrfam_desc ribosomal protein uS2;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpsB_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01011 evalue:6.6e-113 score:374.7 best_domain_score:374.5 name:TIGR01011;
7462 8343 CDS
ID metaerg.pl|00719
allgo_ids GO:0003746; GO:0006414; GO:0005737;
allko_ids K02357;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583889.1 1 293 evalue:2.5e-151 qcov:100.00 identity:97.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00889;
pfam_desc Elongation factor TS;
pfam_id EF_TS;
pfam_target db:Pfam-A.hmm|PF00889.19 evalue:9.4e-74 score:246.7 best_domain_score:246.3 name:EF_TS;
sprot_desc Elongation factor Ts;
sprot_id sp|Q9KA64|EFTS_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA64|EFTS_BACHD 1 293 evalue:5.0e-114 qcov:100.00 identity:72.80;
tigrfam_acc TIGR00116;
tigrfam_desc translation elongation factor Ts;
tigrfam_mainrole Protein synthesis;
tigrfam_name tsf;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00116 evalue:1e-109 score:365.4 best_domain_score:365.2 name:TIGR00116;
8425 9150 CDS
ID metaerg.pl|00720
allec_ids 2.7.4.22;
allgo_ids GO:0005737; GO:0005524; GO:0033862; GO:0044210;
allko_ids K12525; K09903; K00003; K00928; K12524;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583888.1 1 241 evalue:7.5e-125 qcov:100.00 identity:98.80;
kegg_pathway_id 00300; 00240; 00260;
kegg_pathway_name Lysine biosynthesis; Pyrimidine metabolism; Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00696;
pfam_desc Amino acid kinase family;
pfam_id AA_kinase;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:1.6e-29 score:102.4 best_domain_score:102.2 name:AA_kinase;
sprot_desc Uridylate kinase;
sprot_id sp|Q9KA65|PYRH_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA65|PYRH_BACHD 6 241 evalue:8.4e-107 qcov:97.90 identity:81.80;
tigrfam_acc TIGR02075;
tigrfam_desc UMP kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name pyrH_bact;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02075 evalue:2.1e-104 score:347.4 best_domain_score:347.2 name:TIGR02075;
9150 9707 CDS
ID metaerg.pl|00721
allgo_ids GO:0005737; GO:0006415;
allko_ids K02838;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583887.1 1 185 evalue:7.1e-91 qcov:100.00 identity:99.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01765;
pfam_desc Ribosome recycling factor;
pfam_id RRF;
pfam_target db:Pfam-A.hmm|PF01765.19 evalue:1.4e-65 score:219.4 best_domain_score:218.8 name:RRF;
sprot_desc Ribosome-recycling factor;
sprot_id sp|A8FDB6|RRF_BACP2;
sprot_target db:uniprot_sprot|sp|A8FDB6|RRF_BACP2 1 145 evalue:1.7e-54 qcov:78.40 identity:72.40;
tigrfam_acc TIGR00496;
tigrfam_desc ribosome recycling factor;
tigrfam_mainrole Protein synthesis;
tigrfam_name frr;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00496 evalue:1e-73 score:245.9 best_domain_score:245.7 name:TIGR00496;
9882 10646 CDS
ID metaerg.pl|00722
allec_ids 2.5.1.-; 2.5.1.31;
allgo_ids GO:0016765; GO:0000287; GO:0004659;
allko_ids K00806;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583886.1 1 254 evalue:2.9e-135 qcov:100.00 identity:94.90;
kegg_pathway_id 00900;
kegg_pathway_name Terpenoid biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-6383; PWY-5027; PWY-5893; PWY-5864; PWY-5133; PWY-6129; PWY-5817; PWY-6403; PWY-5064; PWY-4502; PWY-5838; PWY-5899; PWY-6520; PWY-5134; PWY-5785; PWY-5701; PWY-5140; PWY-5135; PWY-6404; PWY-5806; PWY-5898; PWY-5863; PWY-5816; PWY-5845; PWY-5862; PWY-5896; PWY-2681; PWY-5068; PWY-5897; PWY-5808; PWY-5132; PWY-6263; PWY-6262; PWY-5861; PWY-724; PWY-5783; PWY-5805; POLYISOPRENSYN-PWY;
metacyc_pathway_name mono-trans, poly-cis decaprenyl phosphate biosynthesis;; phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;; superpathway of plastoquinol biosynthesis;; colupulone and cohumulone biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; nonaprenyl diphosphate biosynthesis II;; superpathway of bitter acids biosynthesis;; di-trans,poly-cis-undecaprenyl phosphate biosynthesis;; shikonin biosynthesis;; cannabinoid biosynthesis;; xanthohumol biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of menaquinol-12 biosynthesis;; superpathway of phylloquinol biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; trans-zeatin biosynthesis;; chlorophyll cycle;; superpathway of menaquinol-11 biosynthesis;; hyperforin and adhyperforin biosynthesis;; lupulone and humulone biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; demethylmenaquinol-8 biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; octaprenyl diphosphate biosynthesis;; nonaprenyl diphosphate biosynthesis I;; polyisoprenoid biosynthesis (E. coli);;
metacyc_pathway_type Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Lipid-Biosynthesis;; Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; QUINONE-SYN;; TERPENOPHENOLICS-SYN;; PRENYLFLAVONOID-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; CYTOKININ-BIOSYNTHESIS;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;;
pfam_acc PF01255;
pfam_desc Putative undecaprenyl diphosphate synthase;
pfam_id Prenyltransf;
pfam_target db:Pfam-A.hmm|PF01255.19 evalue:1.1e-83 score:279.4 best_domain_score:279.1 name:Prenyltransf;
sprot_desc Isoprenyl transferase;
sprot_id sp|Q9KA67|ISPT_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA67|ISPT_BACHD 1 254 evalue:4.4e-90 qcov:100.00 identity:62.10;
tigrfam_acc TIGR00055;
tigrfam_desc di-trans,poly-cis-decaprenylcistransferase;
tigrfam_mainrole Cell envelope;
tigrfam_name uppS;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00055 evalue:3.2e-87 score:290.8 best_domain_score:290.6 name:TIGR00055;
10659 11453 CDS
ID metaerg.pl|00723
allec_ids 2.7.7.41;
allgo_ids GO:0016021; GO:0005886; GO:0004605; GO:0016024;
allko_ids K00902; K00981;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583885.1 1 264 evalue:2.1e-136 qcov:100.00 identity:98.50;
kegg_pathway_id 00564; 00510;
kegg_pathway_name Glycerophospholipid metabolism; N-Glycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY0-1319; PWY4FS-8; PHOSLIPSYN-PWY; PWY-5981; PWY4FS-7; PWY-5667; PHOSLIPSYN2-PWY;
metacyc_pathway_name CDP-diacylglycerol biosynthesis II;; phosphatidylglycerol biosynthesis II (non-plastidic);; superpathway of phospholipid biosynthesis I (bacteria);; CDP-diacylglycerol biosynthesis III;; phosphatidylglycerol biosynthesis I (plastidic);; CDP-diacylglycerol biosynthesis I;; superpathway of phospholipid biosynthesis II (plants);;
metacyc_pathway_type CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;;
pfam_acc PF01148;
pfam_desc Cytidylyltransferase family;
pfam_id CTP_transf_1;
pfam_target db:Pfam-A.hmm|PF01148.20 evalue:3.3e-73 score:245.9 best_domain_score:245.8 name:CTP_transf_1;
sprot_desc Phosphatidate cytidylyltransferase;
sprot_id sp|O31752|CDSA_BACSU;
sprot_target db:uniprot_sprot|sp|O31752|CDSA_BACSU 1 258 evalue:2.3e-65 qcov:97.70 identity:50.60;
tm_num 8;
10659 11453 transmembrane_helix
ID metaerg.pl|00724
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i10671-10775o10803-10871i10890-10949o10977-11036i11055-11123o11181-11249i11253-11321o11379-11447i;
11469 12617 CDS
ID metaerg.pl|00725
allec_ids 1.1.1.267;
allgo_ids GO:0005515; GO:0030604; GO:0046872; GO:0070402; GO:0019288; GO:0016114;
allko_ids K00099;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583884.1 1 382 evalue:3.3e-199 qcov:100.00 identity:92.70;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5121; PWY-6270; NONMEVIPP-PWY;
metacyc_pathway_name superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; isoprene biosynthesis I;; methylerythritol phosphate pathway I;;
metacyc_pathway_type DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; ISOPRENOIDS; Super-Pathways;; MEP-Pathways;;
pfam_acc PF13288; PF08436; PF02670;
pfam_desc DXP reductoisomerase C-terminal domain; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain; 1-deoxy-D-xylulose 5-phosphate reductoisomerase;
pfam_id DXPR_C; DXP_redisom_C; DXP_reductoisom;
pfam_target db:Pfam-A.hmm|PF13288.6 evalue:1.2e-41 score:140.8 best_domain_score:140.1 name:DXPR_C; db:Pfam-A.hmm|PF08436.12 evalue:1.5e-41 score:139.6 best_domain_score:138.7 name:DXP_redisom_C; db:Pfam-A.hmm|PF02670.16 evalue:1.8e-38 score:131.4 best_domain_score:130.4 name:DXP_reductoisom;
sprot_desc 1-deoxy-D-xylulose 5-phosphate reductoisomerase;
sprot_id sp|C5D9C1|DXR_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D9C1|DXR_GEOSW 1 377 evalue:2.3e-127 qcov:98.70 identity:61.40;
tigrfam_acc TIGR00243;
tigrfam_desc 1-deoxy-D-xylulose 5-phosphate reductoisomerase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name Dxr;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00243 evalue:1.5e-155 score:517.1 best_domain_score:516.9 name:TIGR00243;
12633 13892 CDS
ID metaerg.pl|00726
allec_ids 3.4.24.-;
allgo_ids GO:0005515; GO:0016021; GO:0005886; GO:0046872; GO:0004222;
allko_ids K11749;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583883.1 1 419 evalue:3.8e-225 qcov:100.00 identity:96.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00595; PF13180; PF17820; PF02163;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Peptidase family M50;
pfam_id PDZ; PDZ_2; PDZ_6; Peptidase_M50;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:9.5e-06 score:25.1 best_domain_score:24.2 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:5.1e-10 score:38.8 best_domain_score:37.7 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:8.9e-10 score:37.5 best_domain_score:36.5 name:PDZ_6; db:Pfam-A.hmm|PF02163.22 evalue:4.9e-79 score:264.3 best_domain_score:263.8 name:Peptidase_M50;
sprot_desc Zinc metalloprotease RasP;
sprot_id sp|Q9KA70|RASP_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA70|RASP_BACHD 1 419 evalue:1.4e-146 qcov:100.00 identity:61.80;
tigrfam_acc TIGR00054;
tigrfam_desc RIP metalloprotease RseP;
tigrfam_mainrole Protein fate;
tigrfam_name TIGR00054;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00054 evalue:8e-105 score:350.2 best_domain_score:349.0 name:TIGR00054;
tm_num 5;
12633 13892 transmembrane_helix
ID metaerg.pl|00727
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology o12642-12710i13146-13214o13542-13610i13644-13712o13806-13865i;
13918 15621 CDS
ID metaerg.pl|00728
allec_ids 6.1.1.15;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0002161; GO:0004827; GO:0006433;
allko_ids K01881;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583882.1 1 566 evalue:9.7e-309 qcov:99.80 identity:93.60;
kegg_pathway_id 00330; 00970;
kegg_pathway_name Arginine and proline metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03129; PF00587; PF04073;
pfam_desc Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Aminoacyl-tRNA editing domain;
pfam_id HGTP_anticodon; tRNA-synt_2b; tRNA_edit;
pfam_target db:Pfam-A.hmm|PF03129.20 evalue:2.9e-18 score:65.1 best_domain_score:65.1 name:HGTP_anticodon; db:Pfam-A.hmm|PF00587.25 evalue:1.6e-50 score:170.8 best_domain_score:170.2 name:tRNA-synt_2b; db:Pfam-A.hmm|PF04073.15 evalue:8.1e-26 score:89.8 best_domain_score:89.0 name:tRNA_edit;
sprot_desc Proline--tRNA ligase;
sprot_id sp|C5D9C3|SYP_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D9C3|SYP_GEOSW 1 567 evalue:8.3e-222 qcov:100.00 identity:65.10;
tigrfam_acc TIGR00409;
tigrfam_desc proline--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name proS_fam_II;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00409 evalue:2.6e-230 score:765.3 best_domain_score:765.1 name:TIGR00409;
15819 20120 CDS
ID metaerg.pl|00729
allec_ids 2.7.7.7;
allgo_ids GO:0006260; GO:0008408; GO:0005737; GO:0003677; GO:0003887; GO:0006261;
allko_ids K03763; K02337; K02342; K02323; K14162; K04486;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:4.8e-48 score:162.5 best_domain_score:160.4 name:DEDDh;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583881.1 1 1433 evalue:0.0e+00 qcov:100.00 identity:98.00;
kegg_pathway_id 03030; 00340;
kegg_pathway_name DNA replication; Histidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF07733; PF14480; PF11490; PF17657; PF14579; PF02811; PF00929;
pfam_desc Bacterial DNA polymerase III alpha NTPase domain; DNA polymerase III polC-type N-terminus I; DNA polymerase III polC-type N-terminus II; Bacterial DNA polymerase III alpha subunit finger domain; Helix-hairpin-helix motif; PHP domain; Exonuclease;
pfam_id DNA_pol3_alpha; DNA_pol3_a_NI; DNA_pol3_a_NII; DNA_pol3_finger; HHH_6; PHP; RNase_T;
pfam_target db:Pfam-A.hmm|PF07733.12 evalue:9.2e-63 score:211.5 best_domain_score:154.8 name:DNA_pol3_alpha; db:Pfam-A.hmm|PF14480.6 evalue:6.3e-17 score:60.6 best_domain_score:58.9 name:DNA_pol3_a_NI; db:Pfam-A.hmm|PF11490.8 evalue:1.5e-18 score:66.0 best_domain_score:64.0 name:DNA_pol3_a_NII; db:Pfam-A.hmm|PF17657.1 evalue:6.5e-25 score:86.6 best_domain_score:84.9 name:DNA_pol3_finger; db:Pfam-A.hmm|PF14579.6 evalue:4.4e-10 score:38.9 best_domain_score:36.9 name:HHH_6; db:Pfam-A.hmm|PF02811.19 evalue:6.6e-52 score:175.4 best_domain_score:174.1 name:PHP; db:Pfam-A.hmm|PF00929.24 evalue:1.9e-41 score:141.6 best_domain_score:140.5 name:RNase_T;
sprot_desc DNA polymerase III PolC-type;
sprot_id sp|Q9KA72|DPO3_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA72|DPO3_BACHD 1 1433 evalue:0.0e+00 qcov:100.00 identity:70.10;
tigrfam_acc TIGR00573; TIGR01405;
tigrfam_desc exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, alpha subunit, Gram-positive type;
tigrfam_mainrole DNA metabolism; DNA metabolism;
tigrfam_name dnaq; polC_Gram_pos;
tigrfam_sub1role Degradation of DNA; DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00573 evalue:3.5e-57 score:192.5 best_domain_score:191.7 name:TIGR00573; db:TIGRFAMs.hmm|TIGR01405 evalue:0 score:1909.7 best_domain_score:1909.4 name:TIGR01405;
20279 20749 CDS
ID metaerg.pl|00730
allgo_ids GO:0005737; GO:0042274;
allko_ids K09748;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583880.1 1 156 evalue:5.4e-76 qcov:100.00 identity:95.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF02576; PF17384;
pfam_desc RimP N-terminal domain; RimP C-terminal SH3 domain;
pfam_id DUF150; DUF150_C;
pfam_target db:Pfam-A.hmm|PF02576.17 evalue:1.7e-29 score:101.3 best_domain_score:100.7 name:DUF150; db:Pfam-A.hmm|PF17384.2 evalue:6.4e-15 score:54.3 best_domain_score:53.0 name:DUF150_C;
sprot_desc Ribosome maturation factor RimP;
sprot_id sp|Q5WFT8|RIMP_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WFT8|RIMP_BACSK 1 154 evalue:1.0e-49 qcov:98.70 identity:61.70;
20774 21922 CDS
ID metaerg.pl|00731
allgo_ids GO:0003723; GO:0005737; GO:0003700; GO:0006353; GO:0031564;
allko_ids K02600;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583879.1 1 382 evalue:1.0e-208 qcov:100.00 identity:99.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00013; PF13184; PF08529; PF00575;
pfam_desc KH domain; NusA-like KH domain; NusA N-terminal domain; S1 RNA binding domain;
pfam_id KH_1; KH_5; NusA_N; S1;
pfam_target db:Pfam-A.hmm|PF00013.29 evalue:8.1e-07 score:28.0 best_domain_score:14.4 name:KH_1; db:Pfam-A.hmm|PF13184.6 evalue:4.3e-30 score:102.8 best_domain_score:97.7 name:KH_5; db:Pfam-A.hmm|PF08529.11 evalue:1.1e-45 score:154.1 best_domain_score:154.1 name:NusA_N; db:Pfam-A.hmm|PF00575.23 evalue:1.6e-09 score:37.2 best_domain_score:37.2 name:S1;
sprot_desc Transcription termination/antitermination protein NusA;
sprot_id sp|Q9KA74|NUSA_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA74|NUSA_BACHD 1 381 evalue:1.9e-169 qcov:99.70 identity:81.40;
tigrfam_acc TIGR01953;
tigrfam_desc transcription termination factor NusA;
tigrfam_mainrole Transcription;
tigrfam_name NusA;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR01953 evalue:2.8e-131 score:436.7 best_domain_score:436.5 name:TIGR01953;
21937 22212 CDS
ID metaerg.pl|00732
allko_ids K07742;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583878.1 1 91 evalue:6.6e-42 qcov:100.00 identity:98.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF04296;
pfam_desc Protein of unknown function (DUF448);
pfam_id DUF448;
pfam_target db:Pfam-A.hmm|PF04296.13 evalue:1.7e-28 score:97.5 best_domain_score:97.3 name:DUF448;
sprot_desc hypothetical protein;
sprot_id sp|P32728|YLXR_BACSU;
sprot_target db:uniprot_sprot|sp|P32728|YLXR_BACSU 2 65 evalue:2.8e-15 qcov:70.30 identity:60.90;
22212 22520 CDS
ID metaerg.pl|00733
allgo_ids GO:0005840; GO:0003723; GO:0042254;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583877.1 1 102 evalue:1.5e-47 qcov:100.00 identity:99.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01248;
pfam_desc Ribosomal protein L7Ae/L30e/S12e/Gadd45 family;
pfam_id Ribosomal_L7Ae;
pfam_target db:Pfam-A.hmm|PF01248.26 evalue:1.4e-19 score:68.8 best_domain_score:68.6 name:Ribosomal_L7Ae;
sprot_desc Probable ribosomal protein YlxQ;
sprot_id sp|P32729|YLXQ_BACSU;
sprot_target db:uniprot_sprot|sp|P32729|YLXQ_BACSU 6 92 evalue:3.0e-21 qcov:85.30 identity:54.00;
22569 24695 CDS
ID metaerg.pl|00734
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0003743;
allko_ids K00955; K00956; K00860; K02519;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583876.1 1 708 evalue:0.0e+00 qcov:100.00 identity:97.60;
kegg_pathway_id 00450; 00920; 00230;
kegg_pathway_name Selenoamino acid metabolism; Sulfur metabolism; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00025; PF00009; PF11987; PF04760; PF01926; PF00071; PF09439;
pfam_desc ADP-ribosylation factor family; Elongation factor Tu GTP binding domain; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; 50S ribosome-binding GTPase; Ras family; Signal recognition particle receptor beta subunit;
pfam_id Arf; GTP_EFTU; IF-2; IF2_N; MMR_HSR1; Ras; SRPRB;
pfam_target db:Pfam-A.hmm|PF00025.21 evalue:1.2e-06 score:27.3 best_domain_score:25.5 name:Arf; db:Pfam-A.hmm|PF00009.27 evalue:2.2e-36 score:124.4 best_domain_score:119.0 name:GTP_EFTU; db:Pfam-A.hmm|PF11987.8 evalue:6e-37 score:125.2 best_domain_score:123.6 name:IF-2; db:Pfam-A.hmm|PF04760.15 evalue:2.6e-31 score:106.5 best_domain_score:55.1 name:IF2_N; db:Pfam-A.hmm|PF01926.23 evalue:8.1e-11 score:41.3 best_domain_score:39.9 name:MMR_HSR1; db:Pfam-A.hmm|PF00071.22 evalue:1.8e-05 score:23.6 best_domain_score:22.4 name:Ras; db:Pfam-A.hmm|PF09439.10 evalue:2.2e-05 score:23.2 best_domain_score:21.1 name:SRPRB;
sprot_desc Translation initiation factor IF-2;
sprot_id sp|Q9KA77|IF2_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA77|IF2_BACHD 2 708 evalue:2.2e-264 qcov:99.90 identity:73.90;
tigrfam_acc TIGR00231; TIGR00487;
tigrfam_desc small GTP-binding protein domain; translation initiation factor IF-2;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; IF-2;
tigrfam_sub1role General; Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:3.3e-39 score:133.4 best_domain_score:132.2 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00487 evalue:1.9e-276 score:917.6 best_domain_score:914.8 name:TIGR00487;
24692 24973 CDS
ID metaerg.pl|00735
allko_ids K09764;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583875.1 1 93 evalue:4.3e-44 qcov:100.00 identity:100.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF04456;
pfam_desc Protein of unknown function (DUF503);
pfam_id DUF503;
pfam_target db:Pfam-A.hmm|PF04456.12 evalue:4.1e-26 score:89.9 best_domain_score:89.7 name:DUF503;
sprot_desc hypothetical protein;
sprot_id sp|P32730|YLXP_BACSU;
sprot_target db:uniprot_sprot|sp|P32730|YLXP_BACSU 3 92 evalue:1.3e-18 qcov:96.80 identity:50.00;
25001 25348 CDS
ID metaerg.pl|00736
allgo_ids GO:0006364; GO:0005737; GO:0030490;
allko_ids K02834;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583874.1 1 115 evalue:3.6e-53 qcov:100.00 identity:99.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF02033;
pfam_desc Ribosome-binding factor A;
pfam_id RBFA;
pfam_target db:Pfam-A.hmm|PF02033.18 evalue:4.1e-36 score:122.9 best_domain_score:122.7 name:RBFA;
sprot_desc Ribosome-binding factor A;
sprot_id sp|C5D9D1|RBFA_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D9D1|RBFA_GEOSW 3 111 evalue:1.0e-38 qcov:94.80 identity:75.20;
tigrfam_acc TIGR00082;
tigrfam_desc ribosome-binding factor A;
tigrfam_mainrole Transcription;
tigrfam_name rbfA;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR00082 evalue:4.7e-41 score:139.1 best_domain_score:138.9 name:TIGR00082;
25390 25608 CDS
ID metaerg.pl|00737
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
25965 26882 CDS
ID metaerg.pl|00738
allec_ids 5.4.99.25;
allgo_ids GO:0006396; GO:0003723; GO:0106029; GO:0031119;
allko_ids K03177;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583873.1 1 305 evalue:1.3e-153 qcov:100.00 identity:90.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF16198; PF01509;
pfam_desc tRNA pseudouridylate synthase B C-terminal domain; TruB family pseudouridylate synthase (N terminal domain);
pfam_id TruB_C_2; TruB_N;
pfam_target db:Pfam-A.hmm|PF16198.5 evalue:3.6e-12 score:45.5 best_domain_score:44.3 name:TruB_C_2; db:Pfam-A.hmm|PF01509.18 evalue:1.3e-55 score:187.1 best_domain_score:185.8 name:TruB_N;
sprot_desc tRNA pseudouridine synthase B;
sprot_id sp|Q9KA80|TRUB_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA80|TRUB_BACHD 6 301 evalue:1.9e-79 qcov:97.00 identity:51.80;
tigrfam_acc TIGR00431;
tigrfam_desc tRNA pseudouridine(55) synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TruB;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00431 evalue:4.3e-74 score:247.9 best_domain_score:247.6 name:TIGR00431;
26900 27847 CDS
ID metaerg.pl|00739
allec_ids 2.7.1.26; 2.7.7.2; 2.7.1.26 2.7.7.2;
allgo_ids GO:0003824; GO:0009058; GO:0005524; GO:0003919; GO:0008531; GO:0006747; GO:0009398; GO:0009231;
allko_ids K11753;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583872.1 1 309 evalue:7.1e-160 qcov:98.10 identity:92.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-6168; RIBOSYN2-PWY; PWY-6167; PWY66-366;
metacyc_pathway_name flavin biosynthesis III (fungi);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis II (archaea);; flavin biosynthesis IV (mammalian);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF01467; PF06574; PF01687;
pfam_desc Cytidylyltransferase-like; FAD synthetase; Riboflavin kinase;
pfam_id CTP_transf_like; FAD_syn; Flavokinase;
pfam_target db:Pfam-A.hmm|PF01467.26 evalue:0.00014 score:21.3 best_domain_score:18.9 name:CTP_transf_like; db:Pfam-A.hmm|PF06574.12 evalue:1.5e-46 score:157.4 best_domain_score:156.7 name:FAD_syn; db:Pfam-A.hmm|PF01687.17 evalue:2.4e-40 score:136.5 best_domain_score:135.5 name:Flavokinase;
sprot_desc Bifunctional riboflavin kinase/FMN adenylyltransferase;
sprot_id sp|P54575|RIBC_BACSU;
sprot_target db:uniprot_sprot|sp|P54575|RIBC_BACSU 1 308 evalue:4.2e-74 qcov:97.80 identity:47.60;
tigrfam_acc TIGR00083;
tigrfam_desc riboflavin biosynthesis protein RibF;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribF;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00083 evalue:1.5e-92 score:309.3 best_domain_score:309.1 name:TIGR00083;
27960 28229 CDS
ID metaerg.pl|00740
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02956;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583871.1 1 89 evalue:5.5e-41 qcov:100.00 identity:100.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00312;
pfam_desc Ribosomal protein S15;
pfam_id Ribosomal_S15;
pfam_target db:Pfam-A.hmm|PF00312.22 evalue:1e-38 score:130.6 best_domain_score:130.5 name:Ribosomal_S15;
sprot_desc 30S ribosomal protein S15;
sprot_id sp|Q9KA82|RS15_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA82|RS15_BACHD 1 89 evalue:2.3e-41 qcov:100.00 identity:95.50;
tigrfam_acc TIGR00952;
tigrfam_desc ribosomal protein uS15;
tigrfam_mainrole Protein synthesis;
tigrfam_name S15_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00952 evalue:2.8e-42 score:142.1 best_domain_score:142.0 name:TIGR00952;
28450 30540 CDS
ID metaerg.pl|00741
allec_ids 2.7.7.8;
allgo_ids GO:0003723; GO:0005737; GO:0000287; GO:0004654; GO:0006402; GO:0006396;
allko_ids K12818; K00962;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583870.1 1 696 evalue:0.0e+00 qcov:100.00 identity:98.70;
kegg_pathway_id 00240; 00230;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00013; PF03726; PF01138; PF03725; PF00575;
pfam_desc KH domain; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; S1 RNA binding domain;
pfam_id KH_1; PNPase; RNase_PH; RNase_PH_C; S1;
pfam_target db:Pfam-A.hmm|PF00013.29 evalue:1.9e-11 score:42.8 best_domain_score:41.5 name:KH_1; db:Pfam-A.hmm|PF03726.14 evalue:5.6e-17 score:61.3 best_domain_score:61.3 name:PNPase; db:Pfam-A.hmm|PF01138.21 evalue:1.3e-38 score:131.8 best_domain_score:69.9 name:RNase_PH; db:Pfam-A.hmm|PF03725.15 evalue:8.8e-22 score:76.2 best_domain_score:49.2 name:RNase_PH_C; db:Pfam-A.hmm|PF00575.23 evalue:6.8e-20 score:70.4 best_domain_score:69.0 name:S1;
sprot_desc Polyribonucleotide nucleotidyltransferase;
sprot_id sp|Q9KA83|PNP_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA83|PNP_BACHD 1 694 evalue:2.4e-300 qcov:99.70 identity:76.80;
tigrfam_acc TIGR03591;
tigrfam_desc polyribonucleotide nucleotidyltransferase;
tigrfam_mainrole Transcription;
tigrfam_name polynuc_phos;
tigrfam_sub1role Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR03591 evalue:0 score:1032.6 best_domain_score:1032.5 name:TIGR03591;
30629 31888 CDS
ID metaerg.pl|00742
allec_ids 3.4.24.-;
allgo_ids GO:0046872; GO:0004222;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583869.1 1 419 evalue:6.3e-220 qcov:100.00 identity:95.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00675; PF05193;
pfam_desc Insulinase (Peptidase family M16); Peptidase M16 inactive domain;
pfam_id Peptidase_M16; Peptidase_M16_C;
pfam_target db:Pfam-A.hmm|PF00675.20 evalue:8.8e-47 score:158.1 best_domain_score:158.1 name:Peptidase_M16; db:Pfam-A.hmm|PF05193.21 evalue:2.2e-40 score:137.9 best_domain_score:135.6 name:Peptidase_M16_C;
sprot_desc Uncharacterized zinc protease YmxG;
sprot_id sp|Q04805|YMXG_BACSU;
sprot_target db:uniprot_sprot|sp|Q04805|YMXG_BACSU 1 406 evalue:1.6e-129 qcov:96.90 identity:55.50;
32004 33047 CDS
ID metaerg.pl|00743
allec_ids 1.2.1.11;
allgo_ids GO:0016620; GO:0051287; GO:0055114; GO:0004073; GO:0050661; GO:0046983; GO:0071266; GO:0019877; GO:0009097; GO:0009089; GO:0009088;
allko_ids K00145; K12659; K00133;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583868.1 1 347 evalue:3.4e-187 qcov:100.00 identity:98.60;
kegg_pathway_id 00300; 00260; 00220;
kegg_pathway_name Lysine biosynthesis; Glycine, serine and threonine metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id METSYN-PWY; HOMOSERSYN-PWY; THRESYN-PWY; PWY-724; PWY-6565; PWY-5097; PWY-6562; PWY0-781; PWY-5345; P4-PWY; P101-PWY; PWY-3001; PWY-5347; PWY-6559; PWY-2941; DAPLYSINESYN-PWY; MET-SAM-PWY;
metacyc_pathway_name superpathway of L-homoserine and L-methionine biosynthesis;; L-homoserine biosynthesis;; superpathway of L-threonine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of polyamine biosynthesis III;; L-lysine biosynthesis VI;; norspermidine biosynthesis;; aspartate superpathway;; superpathway of L-methionine biosynthesis (by sulfhydrylation);; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; ectoine biosynthesis;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-methionine biosynthesis (transsulfuration);; spermidine biosynthesis II;; L-lysine biosynthesis II;; L-lysine biosynthesis I;; superpathway of S-adenosyl-L-methionine biosynthesis;;
metacyc_pathway_type Methionine-De-novo-Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis;; Super-Pathways; THREONINE-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Polyamine-Biosynthesis;; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis;; ISOLEUCINE-SYN; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Spermidine-Biosynthesis;; LYSINE-SYN;; LYSINE-SYN;; Super-Pathways;;
pfam_acc PF01118; PF02774;
pfam_desc Semialdehyde dehydrogenase, NAD binding domain; Semialdehyde dehydrogenase, dimerisation domain;
pfam_id Semialdhyde_dh; Semialdhyde_dhC;
pfam_target db:Pfam-A.hmm|PF01118.24 evalue:4e-35 score:120.1 best_domain_score:118.7 name:Semialdhyde_dh; db:Pfam-A.hmm|PF02774.18 evalue:1.7e-51 score:174.2 best_domain_score:173.6 name:Semialdhyde_dhC;
sprot_desc Aspartate-semialdehyde dehydrogenase;
sprot_id sp|Q04797|DHAS_BACSU;
sprot_target db:uniprot_sprot|sp|Q04797|DHAS_BACSU 1 346 evalue:2.4e-139 qcov:99.70 identity:70.50;
tigrfam_acc TIGR01296;
tigrfam_desc aspartate-semialdehyde dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name asd_B;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01296 evalue:5.4e-151 score:501.6 best_domain_score:501.4 name:TIGR01296;
33069 34280 CDS
ID metaerg.pl|00744
allec_ids 2.7.2.4;
allgo_ids GO:0005829; GO:0004072; GO:0005524; GO:0019877; GO:0009090; GO:0009089; GO:0009088;
allko_ids K12657; K00931; K12526; K12525; K00928; K00003; K12524;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583867.1 2 403 evalue:9.3e-213 qcov:99.80 identity:94.50;
kegg_pathway_id 00220; 00300; 00260;
kegg_pathway_name Urea cycle and metabolism of amino groups; Lysine biosynthesis; Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5097; PWY-6565; PWY0-781; PWY-6562; METSYN-PWY; THRESYN-PWY; PWY-724; HOMOSERSYN-PWY; MET-SAM-PWY; PWY-2941; PWY-6559; PWY-5347; PWY-5345; P4-PWY; PWY-3001; P101-PWY; DAPLYSINESYN-PWY;
metacyc_pathway_name L-lysine biosynthesis VI;; superpathway of polyamine biosynthesis III;; aspartate superpathway;; norspermidine biosynthesis;; superpathway of L-homoserine and L-methionine biosynthesis;; superpathway of L-threonine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-homoserine biosynthesis;; superpathway of S-adenosyl-L-methionine biosynthesis;; L-lysine biosynthesis II;; spermidine biosynthesis II;; superpathway of L-methionine biosynthesis (transsulfuration);; superpathway of L-methionine biosynthesis (by sulfhydrylation);; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-isoleucine biosynthesis I;; ectoine biosynthesis;; L-lysine biosynthesis I;;
metacyc_pathway_type LYSINE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; Super-Pathways;; Polyamine-Biosynthesis;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Super-Pathways; THREONINE-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis;; Super-Pathways;; LYSINE-SYN;; Spermidine-Biosynthesis;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; Polyamine-Biosynthesis;; LYSINE-SYN;;
pfam_acc PF00696; PF13840;
pfam_desc Amino acid kinase family; ACT domain;
pfam_id AA_kinase; ACT_7;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:6.9e-51 score:172.4 best_domain_score:171.8 name:AA_kinase; db:Pfam-A.hmm|PF13840.6 evalue:3.9e-22 score:77.0 best_domain_score:67.9 name:ACT_7;
sprot_desc Aspartokinase 1;
sprot_id sp|Q04795|AK1_BACSU;
sprot_target db:uniprot_sprot|sp|Q04795|AK1_BACSU 2 397 evalue:1.2e-118 qcov:98.30 identity:56.80;
tigrfam_acc TIGR00656; TIGR00657;
tigrfam_desc aspartate kinase, monofunctional class; aspartate kinase;
tigrfam_mainrole Amino acid biosynthesis; Amino acid biosynthesis;
tigrfam_name asp_kin_monofn; asp_kinases;
tigrfam_sub1role Aspartate family; Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00656 evalue:3.4e-125 score:417.4 best_domain_score:417.2 name:TIGR00656; db:TIGRFAMs.hmm|TIGR00657 evalue:2.7e-102 score:342.3 best_domain_score:298.4 name:TIGR00657;
34295 35191 CDS
ID metaerg.pl|00745
allec_ids 4.3.3.7;
allgo_ids GO:0016829; GO:0005737; GO:0008840; GO:0019877; GO:0009089;
allko_ids K01714;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583866.1 1 298 evalue:3.5e-156 qcov:100.00 identity:97.70;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00701;
pfam_desc Dihydrodipicolinate synthetase family;
pfam_id DHDPS;
pfam_target db:Pfam-A.hmm|PF00701.22 evalue:7.7e-99 score:329.3 best_domain_score:329.1 name:DHDPS;
sprot_desc 4-hydroxy-tetrahydrodipicolinate synthase;
sprot_id sp|A7Z4U8|DAPA_BACVZ;
sprot_target db:uniprot_sprot|sp|A7Z4U8|DAPA_BACVZ 1 288 evalue:1.7e-93 qcov:96.60 identity:57.60;
tigrfam_acc TIGR00674;
tigrfam_desc 4-hydroxy-tetrahydrodipicolinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapA;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00674 evalue:1.3e-103 score:344.9 best_domain_score:344.7 name:TIGR00674;
35226 37037 CDS
ID metaerg.pl|00746
allec_ids 3.1.-.-;
allgo_ids GO:0005737; GO:0004534; GO:0004521; GO:0003723; GO:0008270; GO:0006397; GO:0006364;
allko_ids K12574;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584002.1 48 603 evalue:8.0e-311 qcov:92.20 identity:97.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00753; PF12706; PF07521; PF17770;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain; Zn-dependent metallo-hydrolase RNA specificity domain; Ribonuclease J C-terminal domain;
pfam_id Lactamase_B; Lactamase_B_2; RMMBL; RNase_J_C;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:2.1e-12 score:46.7 best_domain_score:45.0 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:4.1e-10 score:38.7 best_domain_score:37.6 name:Lactamase_B_2; db:Pfam-A.hmm|PF07521.12 evalue:1.4e-12 score:46.6 best_domain_score:39.9 name:RMMBL; db:Pfam-A.hmm|PF17770.1 evalue:2e-30 score:104.9 best_domain_score:102.9 name:RNase_J_C;
sprot_desc Ribonuclease J2;
sprot_id sp|O31760|RNJ2_BACSU;
sprot_target db:uniprot_sprot|sp|O31760|RNJ2_BACSU 48 602 evalue:4.9e-172 qcov:92.00 identity:53.30;
tigrfam_acc TIGR00649;
tigrfam_desc beta-CASP ribonuclease, RNase J family;
tigrfam_mainrole Transcription;
tigrfam_name MG423;
tigrfam_sub1role Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00649 evalue:6.2e-198 score:657.7 best_domain_score:657.5 name:TIGR00649;
37624 39966 CDS
ID metaerg.pl|00747
allgo_ids GO:0000166; GO:0003677; GO:0005524; GO:0016021; GO:0005886; GO:0007049; GO:0051301; GO:0007059;
allko_ids K03466;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584001.1 3 775 evalue:0.0e+00 qcov:99.10 identity:93.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF17854; PF09397; PF01580;
pfam_desc FtsK alpha domain; Ftsk gamma domain; FtsK/SpoIIIE family;
pfam_id FtsK_alpha; FtsK_gamma; FtsK_SpoIIIE;
pfam_target db:Pfam-A.hmm|PF17854.1 evalue:2.5e-34 score:116.7 best_domain_score:115.4 name:FtsK_alpha; db:Pfam-A.hmm|PF09397.10 evalue:4.5e-30 score:102.5 best_domain_score:101.2 name:FtsK_gamma; db:Pfam-A.hmm|PF01580.18 evalue:3e-67 score:225.7 best_domain_score:167.5 name:FtsK_SpoIIIE;
sprot_desc DNA translocase FtsK;
sprot_id sp|Q9KA95|FTSK_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA95|FTSK_BACHD 14 776 evalue:5.1e-206 qcov:97.80 identity:54.20;
tm_num 5;
37624 39966 transmembrane_helix
ID metaerg.pl|00748
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i37702-37770o37813-37872i37906-37974o38002-38070i38089-38157o;
40030 40752 CDS
ID metaerg.pl|00749
allgo_ids GO:0003700; GO:0006355; GO:0003677; GO:0045892;
allko_ids K00825; K03710;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583864.1 1 240 evalue:5.9e-130 qcov:100.00 identity:97.50;
kegg_pathway_id 00300; 00310;
kegg_pathway_name Lysine biosynthesis; Lysine degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00392; PF07702;
pfam_desc Bacterial regulatory proteins, gntR family; UTRA domain;
pfam_id GntR; UTRA;
pfam_target db:Pfam-A.hmm|PF00392.21 evalue:3.1e-24 score:83.6 best_domain_score:81.6 name:GntR; db:Pfam-A.hmm|PF07702.13 evalue:2e-29 score:101.5 best_domain_score:100.0 name:UTRA;
sprot_desc Uncharacterized HTH-type transcriptional regulator YmfC;
sprot_id sp|O31761|YMFC_BACSU;
sprot_target db:uniprot_sprot|sp|O31761|YMFC_BACSU 3 238 evalue:9.9e-84 qcov:98.30 identity:63.30;
40868 42142 CDS
ID metaerg.pl|00750
allgo_ids GO:0003824; GO:0046872;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus daliensis;
genomedb_acc GCF_900103955.1;
genomedb_target db:genomedb|GCF_900103955.1|WP_090840060.1 4 420 evalue:1.6e-159 qcov:98.30 identity:64.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF05193;
pfam_desc Peptidase M16 inactive domain;
pfam_id Peptidase_M16_C;
pfam_target db:Pfam-A.hmm|PF05193.21 evalue:6.7e-32 score:110.2 best_domain_score:109.7 name:Peptidase_M16_C;
sprot_desc Probable inactive metalloprotease YmfF;
sprot_id sp|O31764|YMFF_BACSU;
sprot_target db:uniprot_sprot|sp|O31764|YMFF_BACSU 12 422 evalue:5.4e-109 qcov:96.90 identity:48.70;
42142 43437 CDS
ID metaerg.pl|00751
allec_ids 3.4.24.-;
allgo_ids GO:0046872; GO:0008237;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584000.1 1 431 evalue:7.1e-235 qcov:100.00 identity:95.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00675; PF05193;
pfam_desc Insulinase (Peptidase family M16); Peptidase M16 inactive domain;
pfam_id Peptidase_M16; Peptidase_M16_C;
pfam_target db:Pfam-A.hmm|PF00675.20 evalue:9.6e-17 score:60.6 best_domain_score:59.5 name:Peptidase_M16; db:Pfam-A.hmm|PF05193.21 evalue:1.4e-16 score:60.3 best_domain_score:59.4 name:Peptidase_M16_C;
sprot_desc Uncharacterized zinc protease YmfH;
sprot_id sp|O31766|YMFH_BACSU;
sprot_target db:uniprot_sprot|sp|O31766|YMFH_BACSU 1 428 evalue:4.4e-143 qcov:99.30 identity:59.80;
43437 44156 CDS
ID metaerg.pl|00752
allec_ids 1.-.-.-;
allgo_ids GO:0003824; GO:0050662; GO:0016616; GO:0055114;
allko_ids K00059;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583863.1 1 239 evalue:1.1e-117 qcov:100.00 identity:91.20;
kegg_pathway_id 00061; 01040;
kegg_pathway_name Fatty acid biosynthesis; Biosynthesis of unsaturated fatty acids;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5826; PWY-2821; PWY-5271; PWY-4302; PWYG-321; PWY-6113; PWY-5987; PWY-5479; PWY-5469;
metacyc_pathway_name hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sesamin biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; LIGNAN-SYN;;
pfam_acc PF00106; PF13561; PF01370; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain;
pfam_id adh_short; adh_short_C2; Epimerase; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2.2e-36 score:124.4 best_domain_score:124.1 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.3e-41 score:141.1 best_domain_score:140.9 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:4e-07 score:29.0 best_domain_score:28.5 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:1.8e-09 score:37.0 best_domain_score:36.5 name:KR;
sp YES;
sprot_desc Uncharacterized oxidoreductase YmfI;
sprot_id sp|O31767|YMFI_BACSU;
sprot_target db:uniprot_sprot|sp|O31767|YMFI_BACSU 1 238 evalue:3.2e-50 qcov:99.60 identity:46.10;
43437 43493 signal_peptide
ID metaerg.pl|00753
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
44248 45012 CDS
ID metaerg.pl|00754
allko_ids K00058; K00003; K00210; K04517; K01653;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583862.1 1 254 evalue:2.6e-136 qcov:100.00 identity:99.60;
kegg_pathway_id 00290; 00770; 00401; 00260; 00400; 00300; 00660; 00650;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis; Novobiocin biosynthesis; Glycine, serine and threonine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Lysine biosynthesis; C5-Branched dibasic acid metabolism; Butanoate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF11868;
pfam_desc Protein of unknown function (DUF3388);
pfam_id DUF3388;
pfam_target db:Pfam-A.hmm|PF11868.8 evalue:1.1e-95 score:317.6 best_domain_score:317.1 name:DUF3388;
sprot_desc hypothetical protein;
sprot_id sp|O31769|YMFK_BACSU;
sprot_target db:uniprot_sprot|sp|O31769|YMFK_BACSU 1 249 evalue:8.3e-97 qcov:98.00 identity:71.10;
45039 45881 CDS
ID metaerg.pl|00755
allgo_ids GO:0043565; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583861.1 1 280 evalue:5.8e-137 qcov:100.00 identity:91.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF13464; PF12844; PF13413; PF01381;
pfam_desc Domain of unknown function (DUF4115); Helix-turn-helix domain; Helix-turn-helix domain; Helix-turn-helix;
pfam_id DUF4115; HTH_19; HTH_25; HTH_3;
pfam_target db:Pfam-A.hmm|PF13464.6 evalue:9.4e-11 score:41.0 best_domain_score:39.7 name:DUF4115; db:Pfam-A.hmm|PF12844.7 evalue:6.5e-09 score:34.9 best_domain_score:33.9 name:HTH_19; db:Pfam-A.hmm|PF13413.6 evalue:1.9e-22 score:78.1 best_domain_score:77.4 name:HTH_25; db:Pfam-A.hmm|PF01381.22 evalue:8.3e-06 score:25.0 best_domain_score:24.3 name:HTH_3;
sprot_desc Uncharacterized membrane protein YmfM;
sprot_id sp|O31771|YMFM_BACSU;
sprot_target db:uniprot_sprot|sp|O31771|YMFM_BACSU 18 267 evalue:3.7e-13 qcov:89.30 identity:34.60;
tm_num 1;
45039 45881 transmembrane_helix
ID metaerg.pl|00756
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology o45357-45425i;
46130 46708 CDS
ID metaerg.pl|00757
allec_ids 2.7.8.5;
allgo_ids GO:0008654; GO:0016020; GO:0016780; GO:0016021; GO:0005886; GO:0008444; GO:0046474; GO:0006655;
allko_ids K00998; K00995;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583860.1 1 192 evalue:4.7e-98 qcov:100.00 identity:98.40;
kegg_pathway_id 00260; 00564;
kegg_pathway_name Glycine, serine and threonine metabolism; Glycerophospholipid metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY4FS-7; PHOSLIPSYN-PWY; PWY4FS-8; PWY-5269; PHOSLIPSYN2-PWY; PWY-5668;
metacyc_pathway_name phosphatidylglycerol biosynthesis I (plastidic);; superpathway of phospholipid biosynthesis I (bacteria);; phosphatidylglycerol biosynthesis II (non-plastidic);; cardiolipin biosynthesis II;; superpathway of phospholipid biosynthesis II (plants);; cardiolipin biosynthesis I;;
metacyc_pathway_type PhosphatidylglycerolBiosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;;
pfam_acc PF01066;
pfam_desc CDP-alcohol phosphatidyltransferase;
pfam_id CDP-OH_P_transf;
pfam_target db:Pfam-A.hmm|PF01066.21 evalue:2.6e-17 score:62.6 best_domain_score:62.6 name:CDP-OH_P_transf;
sprot_desc CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;
sprot_id sp|P46322|PGSA_BACSU;
sprot_target db:uniprot_sprot|sp|P46322|PGSA_BACSU 2 191 evalue:1.0e-54 qcov:99.00 identity:57.90;
tigrfam_acc TIGR00560;
tigrfam_desc CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name pgsA;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00560 evalue:8e-60 score:201.6 best_domain_score:201.5 name:TIGR00560;
tm_num 4;
46130 46708 transmembrane_helix
ID metaerg.pl|00758
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i46166-46234o46247-46315i46376-46444o46586-46654i;
46722 47969 CDS
ID metaerg.pl|00759
allec_ids 3.5.-.-;
allko_ids K03742;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583859.1 1 415 evalue:2.1e-220 qcov:100.00 identity:93.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF02464; PF18146; PF00994;
pfam_desc Competence-damaged protein; Damage-inducible protein CinA KH domain; Probable molybdopterin binding domain;
pfam_id CinA; CinA_KH; MoCF_biosynth;
pfam_target db:Pfam-A.hmm|PF02464.17 evalue:1.1e-47 score:160.8 best_domain_score:160.1 name:CinA; db:Pfam-A.hmm|PF18146.1 evalue:7.8e-25 score:86.1 best_domain_score:85.1 name:CinA_KH; db:Pfam-A.hmm|PF00994.24 evalue:1.6e-32 score:111.4 best_domain_score:110.6 name:MoCF_biosynth;
sprot_desc Putative competence-damage inducible protein;
sprot_id sp|C5D9G1|CINA_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D9G1|CINA_GEOSW 1 409 evalue:1.1e-109 qcov:98.60 identity:51.00;
tigrfam_acc TIGR00177; TIGR00199; TIGR00200;
tigrfam_desc molybdenum cofactor synthesis domain; amidohydrolase, PncC family; competence/damage-inducible protein CinA N-terminal domain;
tigrfam_mainrole DNA metabolism; DNA metabolism;
tigrfam_name molyb_syn; PncC_domain; cinA_nterm;
tigrfam_sub1role DNA replication, recombination, and repair; DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00177 evalue:2.6e-29 score:101.2 best_domain_score:100.2 name:TIGR00177; db:TIGRFAMs.hmm|TIGR00199 evalue:4.1e-38 score:130.0 best_domain_score:129.2 name:TIGR00199; db:TIGRFAMs.hmm|TIGR00200 evalue:3.1e-124 score:414.0 best_domain_score:413.8 name:TIGR00200;
47974 49566 CDS
ID metaerg.pl|00760
allec_ids 3.6.4.13;
allgo_ids GO:0003676; GO:0005524; GO:0043590; GO:0005737; GO:0004004; GO:0003723; GO:0006401; GO:0010501;
allko_ids K01529; K13982; K13116; K12614; K05592; K03725; K03732; K14635; K13181; K03257; K05591; K13131; K13179; K12858; K12811; K13025; K13178; K13177; K01509; K05590; K13184; K03578; K12812; K12823; K10896; K12835; K03579; K13182; K11594; K11927; K14442; K13185;
casgene_acc cd09639_cas3_CAS-I;
casgene_name cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:2.6e-09 score:35.8 best_domain_score:30.6 name:cas3;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583858.1 1 530 evalue:7.5e-295 qcov:100.00 identity:98.10;
kegg_pathway_id 00230; 00790;
kegg_pathway_name Purine metabolism; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF03880; PF00270; PF00271; PF04851;
pfam_desc DbpA RNA binding domain ; DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit;
pfam_id DbpA; DEAD; Helicase_C; ResIII;
pfam_target db:Pfam-A.hmm|PF03880.15 evalue:7.8e-20 score:69.9 best_domain_score:67.7 name:DbpA; db:Pfam-A.hmm|PF00270.29 evalue:2.6e-52 score:176.4 best_domain_score:175.6 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:4.5e-33 score:113.2 best_domain_score:106.9 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:2.9e-08 score:33.2 best_domain_score:32.4 name:ResIII;
sprot_desc DEAD-box ATP-dependent RNA helicase CshA;
sprot_id sp|Q65N62|CSHA_BACLD;
sprot_target db:uniprot_sprot|sp|Q65N62|CSHA_BACLD 1 432 evalue:1.3e-120 qcov:81.50 identity:51.90;
49817 50884 CDS
ID metaerg.pl|00761
allgo_ids GO:0003697; GO:0005524; GO:0006281; GO:0005737; GO:0003684; GO:0008094; GO:0006310; GO:0009432;
allko_ids K03553;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583857.1 1 355 evalue:7.0e-188 qcov:100.00 identity:98.30;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF06745; PF08423; PF00154;
pfam_desc KaiC; Rad51; recA bacterial DNA recombination protein;
pfam_id ATPase; Rad51; RecA;
pfam_target db:Pfam-A.hmm|PF06745.13 evalue:1.6e-07 score:30.1 best_domain_score:26.5 name:ATPase; db:Pfam-A.hmm|PF08423.11 evalue:5.1e-11 score:41.5 best_domain_score:40.3 name:Rad51; db:Pfam-A.hmm|PF00154.21 evalue:2.9e-147 score:488.4 best_domain_score:488.1 name:RecA;
sprot_desc hypothetical protein;
sprot_id sp|Q9KAA7|RECA_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KAA7|RECA_BACHD 1 347 evalue:6.9e-166 qcov:97.70 identity:86.20;
tigrfam_acc TIGR02012;
tigrfam_desc protein RecA;
tigrfam_mainrole DNA metabolism;
tigrfam_name tigrfam_recA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02012 evalue:6.1e-175 score:580.2 best_domain_score:580.1 name:TIGR02012;
51307 52869 CDS
ID metaerg.pl|00762
allec_ids 3.1.-.-;
allgo_ids GO:0003723; GO:0016021; GO:0005886; GO:0004521; GO:0006402;
allko_ids K18682;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583856.1 1 520 evalue:1.6e-273 qcov:100.00 identity:99.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF12072; PF01966; PF08668; PF00013;
pfam_desc Domain of unknown function (DUF3552); HD domain; HDOD domain; KH domain;
pfam_id DUF3552; HD; HDOD; KH_1;
pfam_target db:Pfam-A.hmm|PF12072.8 evalue:1.4e-70 score:236.0 best_domain_score:236.0 name:DUF3552; db:Pfam-A.hmm|PF01966.22 evalue:1.6e-17 score:63.1 best_domain_score:63.1 name:HD; db:Pfam-A.hmm|PF08668.12 evalue:4.5e-07 score:28.8 best_domain_score:20.7 name:HDOD; db:Pfam-A.hmm|PF00013.29 evalue:1.6e-07 score:30.2 best_domain_score:28.4 name:KH_1;
sprot_desc Ribonuclease Y;
sprot_id sp|Q9KAB2|RNY_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KAB2|RNY_BACHD 144 520 evalue:4.6e-179 qcov:72.50 identity:84.40;
tigrfam_acc TIGR00277; TIGR03319;
tigrfam_desc HDIG domain; ribonuclease Y;
tigrfam_mainrole Transcription;
tigrfam_name HDIG; RNase_Y;
tigrfam_sub1role Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00277 evalue:1.1e-24 score:85.3 best_domain_score:85.3 name:TIGR00277; db:TIGRFAMs.hmm|TIGR03319 evalue:1.9e-245 score:814.3 best_domain_score:814.1 name:TIGR03319;
tm_num 1;
51307 52869 transmembrane_helix
ID metaerg.pl|00763
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i51325-51378o;
52966 53760 CDS
ID metaerg.pl|00764
allec_ids 3.1.4.16;
allgo_ids GO:0016787; GO:0005737; GO:0008663; GO:0004113; GO:0046872;
allko_ids K09769;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583855.1 1 264 evalue:8.4e-146 qcov:100.00 identity:95.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00149; PF13277;
pfam_desc Calcineurin-like phosphoesterase; YmdB-like protein;
pfam_id Metallophos; YmdB;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:1.1e-06 score:28.5 best_domain_score:28.1 name:Metallophos; db:Pfam-A.hmm|PF13277.6 evalue:2.4e-111 score:370.3 best_domain_score:370.1 name:YmdB;
sprot_desc 2',3'-cyclic-nucleotide 2'-phosphodiesterase;
sprot_id sp|O31775|YMDB_BACSU;
sprot_target db:uniprot_sprot|sp|O31775|YMDB_BACSU 1 264 evalue:4.1e-107 qcov:100.00 identity:66.70;
tigrfam_acc TIGR00282;
tigrfam_desc metallophosphoesterase, MG_246/BB_0505 family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00282;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00282 evalue:7.7e-110 score:365.6 best_domain_score:365.4 name:TIGR00282;
53897 54157 CDS
ID metaerg.pl|00765
allgo_ids GO:0003676; GO:0000917; GO:0030435;
allko_ids K06416;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583854.1 1 86 evalue:6.1e-37 qcov:100.00 identity:100.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF04232;
pfam_desc Stage V sporulation protein S (SpoVS);
pfam_id SpoVS;
pfam_target db:Pfam-A.hmm|PF04232.12 evalue:2.6e-40 score:135.3 best_domain_score:135.2 name:SpoVS;
sprot_desc Stage V sporulation protein S;
sprot_id sp|P45693|SP5S_BACSU;
sprot_target db:uniprot_sprot|sp|P45693|SP5S_BACSU 1 86 evalue:2.1e-36 qcov:100.00 identity:91.90;
54444 55484 CDS
ID metaerg.pl|00766
allec_ids 1.1.1.103;
allgo_ids GO:0055114; GO:0005737; GO:0008743; GO:0008270; GO:0019518;
allko_ids K00121; K00001; K00055; K13951; K07538; K13952; K13953; K13980; K00060;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583999.1 5 346 evalue:1.6e-197 qcov:98.80 identity:98.00;
kegg_pathway_id 00071; 00350; 00360; 00680; 00621; 00930; 00120; 00632; 00260; 00641; 00622; 00010; 00624;
kegg_pathway_name Fatty acid metabolism; Tyrosine metabolism; Phenylalanine metabolism; Methane metabolism; Biphenyl degradation; Caprolactam degradation; Bile acid biosynthesis; Benzoate degradation via CoA ligation; Glycine, serine and threonine metabolism; 3-Chloroacrylic acid degradation; Toluene and xylene degradation; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id THREONINE-DEG2-PWY; THREOCAT-PWY; THRDLCTCAT-PWY; PWY-5448;
metacyc_pathway_name L-threonine degradation II;; superpathway of L-threonine metabolism;; L-threonine degradation III (to methylglyoxal);; ;
metacyc_pathway_type THREONINE-DEG;; Super-Pathways; THREONINE-DEG;; THREONINE-DEG;; ;
pfam_acc PF08240; PF00107; PF13602; PF01262; PF16912;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase; Alanine dehydrogenase/PNT, C-terminal domain; Glucose dehydrogenase C-terminus;
pfam_id ADH_N; ADH_zinc_N; ADH_zinc_N_2; AlaDh_PNT_C; Glu_dehyd_C;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:7.3e-34 score:115.2 best_domain_score:115.2 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:5.5e-29 score:100.0 best_domain_score:99.3 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:9.9e-09 score:35.6 best_domain_score:34.5 name:ADH_zinc_N_2; db:Pfam-A.hmm|PF01262.21 evalue:1.1e-05 score:24.1 best_domain_score:23.3 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF16912.5 evalue:3.2e-10 score:39.1 best_domain_score:38.5 name:Glu_dehyd_C;
sprot_desc L-threonine 3-dehydrogenase;
sprot_id sp|Q65JE7|TDH_BACLD;
sprot_target db:uniprot_sprot|sp|Q65JE7|TDH_BACLD 1 346 evalue:2.2e-129 qcov:100.00 identity:62.10;
tigrfam_acc TIGR00692;
tigrfam_desc L-threonine 3-dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tdh;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00692 evalue:9.3e-155 score:513.9 best_domain_score:513.8 name:TIGR00692;
55504 56682 CDS
ID metaerg.pl|00767
allec_ids 2.3.1.47;
allgo_ids GO:0009058; GO:0030170; GO:0008710; GO:0008890; GO:0009102;
allko_ids K00639;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583853.1 1 392 evalue:2.1e-217 qcov:100.00 identity:98.70;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5005; BIOTIN-BIOSYNTHESIS-PWY; PWY-6578; PWY-6519;
metacyc_pathway_name biotin biosynthesis II;; biotin biosynthesis I;; 8-amino-7-oxononanoate biosynthesis III;; 8-amino-7-oxononanoate biosynthesis I;;
metacyc_pathway_type BIOTIN-SYN; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; 7-Keto-8-aminopelargonate-Biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;;
pfam_acc PF00155; PF00266; PF01212; PF01053; PF01041; PF01276;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Beta-eliminating lyase; Cys/Met metabolism PLP-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase family; Orn/Lys/Arg decarboxylase, major domain;
pfam_id Aminotran_1_2; Aminotran_5; Beta_elim_lyase; Cys_Met_Meta_PP; DegT_DnrJ_EryC1; OKR_DC_1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:4.2e-68 score:229.4 best_domain_score:229.2 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:4.1e-10 score:38.4 best_domain_score:37.6 name:Aminotran_5; db:Pfam-A.hmm|PF01212.21 evalue:5.4e-05 score:21.8 best_domain_score:20.4 name:Beta_elim_lyase; db:Pfam-A.hmm|PF01053.20 evalue:7e-09 score:33.9 best_domain_score:33.2 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF01041.17 evalue:2e-05 score:23.3 best_domain_score:21.7 name:DegT_DnrJ_EryC1; db:Pfam-A.hmm|PF01276.20 evalue:1.9e-06 score:26.1 best_domain_score:23.8 name:OKR_DC_1;
sprot_desc 8-amino-7-oxononanoate synthase 1;
sprot_id sp|A7Z4X1|BIOF1_BACVZ;
sprot_target db:uniprot_sprot|sp|A7Z4X1|BIOF1_BACVZ 1 391 evalue:3.5e-155 qcov:99.70 identity:68.30;
tigrfam_acc TIGR00858; TIGR01825;
tigrfam_desc 8-amino-7-oxononanoate synthase; putative pyridoxal phosphate-dependent acyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name bioF; gly_Cac_T_rel;
tigrfam_sub1role Biotin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00858 evalue:1.6e-131 score:437.6 best_domain_score:437.4 name:TIGR00858; db:TIGRFAMs.hmm|TIGR01825 evalue:2.4e-189 score:628.0 best_domain_score:627.9 name:TIGR01825;
57328 58866 CDS
ID metaerg.pl|00768
allec_ids 2.8.4.3; 2.1.1.- 2.8.1.-;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0016740; GO:0006400;
allko_ids K06168;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583852.1 1 511 evalue:1.8e-290 qcov:99.80 identity:97.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF04055; PF01938; PF00919;
pfam_desc Radical SAM superfamily; TRAM domain; Uncharacterized protein family UPF0004;
pfam_id Radical_SAM; TRAM; UPF0004;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:7.7e-34 score:116.7 best_domain_score:116.0 name:Radical_SAM; db:Pfam-A.hmm|PF01938.20 evalue:5.7e-16 score:57.5 best_domain_score:56.3 name:TRAM; db:Pfam-A.hmm|PF00919.20 evalue:5.3e-31 score:105.8 best_domain_score:104.1 name:UPF0004;
sprot_desc tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase;
sprot_id sp|Q9KAB7|MIAB_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KAB7|MIAB_BACHD 1 511 evalue:2.9e-234 qcov:99.80 identity:74.90;
tigrfam_acc TIGR00089; TIGR01574;
tigrfam_desc radical SAM methylthiotransferase, MiaB/RimO family; tRNA-i(6)A37 thiotransferase enzyme MiaB;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00089; miaB-methiolase;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00089 evalue:3.6e-162 score:539.2 best_domain_score:538.9 name:TIGR00089; db:TIGRFAMs.hmm|TIGR01574 evalue:2e-196 score:652.4 best_domain_score:652.2 name:TIGR01574;
58866 59288 CDS
ID metaerg.pl|00769
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583851.1 1 140 evalue:1.4e-67 qcov:100.00 identity:98.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF06133;
pfam_desc Control of competence regulator ComK, YlbF/YmcA;
pfam_id Com_YlbF;
pfam_target db:Pfam-A.hmm|PF06133.11 evalue:2.7e-22 score:78.6 best_domain_score:78.3 name:Com_YlbF;
sprot_desc hypothetical protein;
sprot_id sp|O31779|YMCA_BACSU;
sprot_target db:uniprot_sprot|sp|O31779|YMCA_BACSU 5 131 evalue:5.1e-40 qcov:90.70 identity:68.50;
59473 61995 CDS
ID metaerg.pl|00770
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0003684;
allko_ids K03555;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583850.1 1 840 evalue:0.0e+00 qcov:100.00 identity:96.50;
kegg_pathway_id 03430;
kegg_pathway_name Mismatch repair;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01624; PF05188; PF05192; PF05190; PF00488;
pfam_desc MutS domain I; MutS domain II; MutS domain III; MutS family domain IV; MutS domain V;
pfam_id MutS_I; MutS_II; MutS_III; MutS_IV; MutS_V;
pfam_target db:Pfam-A.hmm|PF01624.20 evalue:7.2e-46 score:154.3 best_domain_score:153.0 name:MutS_I; db:Pfam-A.hmm|PF05188.17 evalue:1.9e-06 score:27.5 best_domain_score:27.4 name:MutS_II; db:Pfam-A.hmm|PF05192.18 evalue:2.1e-36 score:125.2 best_domain_score:124.3 name:MutS_III; db:Pfam-A.hmm|PF05190.18 evalue:3e-30 score:103.6 best_domain_score:102.2 name:MutS_IV; db:Pfam-A.hmm|PF00488.21 evalue:2e-84 score:281.5 best_domain_score:279.8 name:MutS_V;
sprot_desc DNA mismatch repair protein MutS;
sprot_id sp|Q9KAC0|MUTS_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KAC0|MUTS_BACHD 1 840 evalue:7.8e-261 qcov:100.00 identity:55.30;
tigrfam_acc TIGR01070;
tigrfam_desc DNA mismatch repair protein MutS;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutS1;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01070 evalue:0 score:1073.1 best_domain_score:1072.9 name:TIGR01070;
62009 63886 CDS
ID metaerg.pl|00771
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0032300; GO:0016887;
allko_ids K07636; K07653; K01768; K02668; K04757; K06379; K07639; K07641; K07646; K07654; K03407; K08282; K02484; K07642; K03572;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583849.1 1 625 evalue:0.0e+00 qcov:100.00 identity:92.20;
kegg_pathway_id 03430; 02020; 03090; 00230;
kegg_pathway_name Mismatch repair; Two-component system - General; Type II secretion system; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01119; PF02518; PF13589; PF08676;
pfam_desc DNA mismatch repair protein, C-terminal domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain;
pfam_id DNA_mis_repair; HATPase_c; HATPase_c_3; MutL_C;
pfam_target db:Pfam-A.hmm|PF01119.19 evalue:7.3e-36 score:121.7 best_domain_score:120.6 name:DNA_mis_repair; db:Pfam-A.hmm|PF02518.26 evalue:6.1e-08 score:32.4 best_domain_score:27.8 name:HATPase_c; db:Pfam-A.hmm|PF13589.6 evalue:1e-10 score:40.8 best_domain_score:39.7 name:HATPase_c_3; db:Pfam-A.hmm|PF08676.11 evalue:5.8e-46 score:155.1 best_domain_score:154.0 name:MutL_C;
sprot_desc DNA mismatch repair protein MutL;
sprot_id sp|Q5WFY4|MUTL_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WFY4|MUTL_BACSK 1 624 evalue:2.1e-178 qcov:99.80 identity:51.40;
tigrfam_acc TIGR00585;
tigrfam_desc DNA mismatch repair protein MutL;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutl;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00585 evalue:1.7e-95 score:319.4 best_domain_score:318.6 name:TIGR00585;
63886 64692 CDS
ID metaerg.pl|00772
allgo_ids GO:0008990; GO:0031167;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583848.1 1 267 evalue:2.3e-127 qcov:99.60 identity:88.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF04445;
pfam_desc Putative SAM-dependent methyltransferase;
pfam_id SAM_MT;
pfam_target db:Pfam-A.hmm|PF04445.13 evalue:4.1e-15 score:55.0 best_domain_score:54.6 name:SAM_MT;
64689 65624 CDS
ID metaerg.pl|00773
allec_ids 2.5.1.75;
allgo_ids GO:0008033; GO:0005524; GO:0052381;
allko_ids K00791;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583847.1 1 311 evalue:2.1e-148 qcov:100.00 identity:86.50;
kegg_pathway_id 00908;
kegg_pathway_name Zeatin biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-2781;
metacyc_pathway_name cis-zeatin biosynthesis;;
metacyc_pathway_type CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF01715; PF01745;
pfam_desc IPP transferase; Isopentenyl transferase;
pfam_id IPPT; IPT;
pfam_target db:Pfam-A.hmm|PF01715.17 evalue:8.5e-82 score:273.6 best_domain_score:273.3 name:IPPT; db:Pfam-A.hmm|PF01745.16 evalue:1.4e-10 score:40.2 best_domain_score:32.1 name:IPT;
sp YES;
sprot_desc tRNA dimethylallyltransferase;
sprot_id sp|Q65JA9|MIAA_BACLD;
sprot_target db:uniprot_sprot|sp|Q65JA9|MIAA_BACLD 2 306 evalue:1.9e-87 qcov:98.10 identity:53.60;
tigrfam_acc TIGR00174;
tigrfam_desc tRNA dimethylallyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name miaA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00174 evalue:3.9e-100 score:334.0 best_domain_score:333.8 name:TIGR00174;
64689 64760 signal_peptide
ID metaerg.pl|00774
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
65658 65894 CDS
ID metaerg.pl|00775
allgo_ids GO:0003723; GO:0006355;
allko_ids K03666;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583846.1 1 78 evalue:2.3e-35 qcov:100.00 identity:100.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF17209;
pfam_desc Hfq protein;
pfam_id Hfq;
pfam_target db:Pfam-A.hmm|PF17209.3 evalue:3.9e-35 score:118.5 best_domain_score:118.3 name:Hfq;
sprot_desc RNA-binding protein Hfq;
sprot_id sp|Q9KAC4|HFQ_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KAC4|HFQ_BACHD 6 78 evalue:1.9e-28 qcov:93.60 identity:83.80;
tigrfam_acc TIGR02383;
tigrfam_desc RNA chaperone Hfq;
tigrfam_mainrole Regulatory functions;
tigrfam_name Hfq;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02383 evalue:9.7e-34 score:114.2 best_domain_score:113.9 name:TIGR02383;
66092 67336 CDS
ID metaerg.pl|00776
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0046872;
allko_ids K03665;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583845.1 1 414 evalue:4.6e-223 qcov:100.00 identity:97.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00025; PF16360; PF13167; PF01926;
pfam_desc ADP-ribosylation factor family; GTP-binding GTPase Middle Region; GTP-binding GTPase N-terminal; 50S ribosome-binding GTPase;
pfam_id Arf; GTP-bdg_M; GTP-bdg_N; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00025.21 evalue:9.3e-08 score:30.9 best_domain_score:29.4 name:Arf; db:Pfam-A.hmm|PF16360.5 evalue:1.4e-30 score:104.9 best_domain_score:104.9 name:GTP-bdg_M; db:Pfam-A.hmm|PF13167.6 evalue:5.3e-33 score:112.8 best_domain_score:111.1 name:GTP-bdg_N; db:Pfam-A.hmm|PF01926.23 evalue:4.5e-18 score:64.6 best_domain_score:63.6 name:MMR_HSR1;
sprot_desc GTPase HflX;
sprot_id sp|D3FTV4|HFLX_BACPE;
sprot_target db:uniprot_sprot|sp|D3FTV4|HFLX_BACPE 5 414 evalue:5.1e-120 qcov:99.00 identity:55.40;
tigrfam_acc TIGR03156;
tigrfam_desc GTP-binding protein HflX;
tigrfam_mainrole Unknown function;
tigrfam_name GTP_HflX;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR03156 evalue:4.3e-140 score:465.7 best_domain_score:465.5 name:TIGR03156;
67384 68640 CDS
ID metaerg.pl|00777
allgo_ids GO:0030170; GO:0003824;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583844.1 1 418 evalue:5.5e-224 qcov:100.00 identity:92.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01053; PF06838;
pfam_desc Cys/Met metabolism PLP-dependent enzyme; Methionine gamma-lyase;
pfam_id Cys_Met_Meta_PP; Met_gamma_lyase;
pfam_target db:Pfam-A.hmm|PF01053.20 evalue:2.9e-06 score:25.3 best_domain_score:24.4 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF06838.11 evalue:1.1e-191 score:635.9 best_domain_score:635.7 name:Met_gamma_lyase;
sprot_desc hypothetical protein;
sprot_id sp|P94479|YNBB_BACSU;
sprot_target db:uniprot_sprot|sp|P94479|YNBB_BACSU 1 414 evalue:3.7e-142 qcov:99.00 identity:59.20;
68881 70224 CDS
ID metaerg.pl|00778
allec_ids 6.3.1.2;
allgo_ids GO:0004356; GO:0006807; GO:0005737; GO:0005524; GO:0070406; GO:0046872; GO:0008134; GO:0043562; GO:0006542; GO:1904797; GO:0045892; GO:0090295; GO:0006598;
allko_ids K01915;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583843.1 1 447 evalue:9.5e-259 qcov:100.00 identity:98.20;
kegg_pathway_id 00550; 02020; 00910; 00251;
kegg_pathway_name Peptidoglycan biosynthesis; Two-component system - General; Nitrogen metabolism; Glutamate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id GLNSYN-PWY; PWY-6549; AMMASSIM-PWY; PWY-381; PWY490-3; PWY-5505; PWY-5675;
metacyc_pathway_name L-glutamine biosynthesis I;; L-glutamine biosynthesis III;; ammonia assimilation cycle III;; nitrate reduction II (assimilatory);; nitrate reduction VI (assimilatory);; L-glutamate and L-glutamine biosynthesis;; nitrate reduction V (assimilatory);;
metacyc_pathway_type Ammonia-Assimilation; GLUTAMINE-SYN;; GLUTAMINE-SYN;; Ammonia-Assimilation; Super-Pathways;; Nitrate-Reduction;; Nitrate-Reduction;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;; Nitrate-Reduction;;
pfam_acc PF00120; PF03951;
pfam_desc Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain;
pfam_id Gln-synt_C; Gln-synt_N;
pfam_target db:Pfam-A.hmm|PF00120.24 evalue:2.2e-141 score:470.0 best_domain_score:469.7 name:Gln-synt_C; db:Pfam-A.hmm|PF03951.19 evalue:2.8e-32 score:109.5 best_domain_score:108.4 name:Gln-synt_N;
sprot_desc Glutamine synthetase;
sprot_id sp|P12425|GLN1A_BACSU;
sprot_target db:uniprot_sprot|sp|P12425|GLN1A_BACSU 1 447 evalue:1.1e-200 qcov:100.00 identity:74.90;
tigrfam_acc TIGR00653;
tigrfam_desc glutamine synthetase, type I;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name GlnA;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00653 evalue:1.9e-182 score:606.2 best_domain_score:600.2 name:TIGR00653;
70460 70645 CDS
ID metaerg.pl|00779
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583842.1 1 61 evalue:1.9e-24 qcov:100.00 identity:95.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
71495 70872 CDS
ID metaerg.pl|00780
allec_ids 3.4.21.88;
allgo_ids GO:0004252; GO:0006508; GO:0003677; GO:0006281; GO:0006260; GO:0045892; GO:0009432;
allko_ids K01356;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584011.1 1 207 evalue:3.9e-106 qcov:100.00 identity:97.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01726; PF00717;
pfam_desc LexA DNA binding domain; Peptidase S24-like;
pfam_id LexA_DNA_bind; Peptidase_S24;
pfam_target db:Pfam-A.hmm|PF01726.16 evalue:7.1e-29 score:98.6 best_domain_score:98.1 name:LexA_DNA_bind; db:Pfam-A.hmm|PF00717.23 evalue:1.3e-17 score:62.7 best_domain_score:62.1 name:Peptidase_S24;
sprot_desc LexA repressor;
sprot_id sp|C0ZES6|LEXA_BREBN;
sprot_target db:uniprot_sprot|sp|C0ZES6|LEXA_BREBN 1 207 evalue:7.2e-83 qcov:100.00 identity:73.90;
tigrfam_acc TIGR00498;
tigrfam_desc repressor LexA;
tigrfam_mainrole Regulatory functions;
tigrfam_name lexA;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00498 evalue:2.3e-77 score:258.4 best_domain_score:258.2 name:TIGR00498;
71697 71999 CDS
ID metaerg.pl|00781
allgo_ids GO:0005737; GO:0000917; GO:0006281; GO:0051782; GO:0009432;
allko_ids K01449;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584013.1 1 100 evalue:2.2e-46 qcov:100.00 identity:92.00;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01476;
pfam_desc LysM domain;
pfam_id LysM;
pfam_target db:Pfam-A.hmm|PF01476.20 evalue:3.9e-08 score:32.5 best_domain_score:30.0 name:LysM;
sprot_desc Cell division suppressor protein YneA;
sprot_id sp|A7Z553|YNEA_BACVZ;
sprot_target db:uniprot_sprot|sp|A7Z553|YNEA_BACVZ 10 93 evalue:3.5e-06 qcov:84.00 identity:34.50;
71996 72679 CDS
ID metaerg.pl|00782
allgo_ids GO:0000150; GO:0003677; GO:0006310;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584015.1 1 227 evalue:8.1e-113 qcov:100.00 identity:93.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00239;
pfam_desc Resolvase, N terminal domain;
pfam_id Resolvase;
pfam_target db:Pfam-A.hmm|PF00239.21 evalue:2.3e-26 score:91.9 best_domain_score:90.1 name:Resolvase;
sprot_desc Resolvase homolog YneB;
sprot_id sp|Q45057|YNEB_BACSU;
sprot_target db:uniprot_sprot|sp|Q45057|YNEB_BACSU 1 211 evalue:2.9e-61 qcov:93.00 identity:55.90;
72703 72936 CDS
ID metaerg.pl|00783
allgo_ids GO:0005737;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584017.1 1 77 evalue:2.9e-30 qcov:100.00 identity:97.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF05979;
pfam_desc Bacterial protein of unknown function (DUF896);
pfam_id DUF896;
pfam_target db:Pfam-A.hmm|PF05979.12 evalue:1.8e-30 score:103.8 best_domain_score:103.5 name:DUF896;
sprot_desc hypothetical protein;
sprot_id sp|Q8EQM4|Y1671_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8EQM4|Y1671_OCEIH 1 77 evalue:2.1e-19 qcov:100.00 identity:63.60;
73083 75083 CDS
ID metaerg.pl|00784
allec_ids 2.2.1.1;
allgo_ids GO:0008661; GO:0016114; GO:0046872; GO:0004802;
allko_ids K00163; K00615;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584019.1 1 666 evalue:0.0e+00 qcov:100.00 identity:96.80;
kegg_pathway_id 00290; 00010; 00030; 00710; 00020; 00620; 00252; 01051; 00650;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Glycolysis / Gluconeogenesis; Pentose phosphate pathway; Carbon fixation in photosynthetic organisms; Citrate cycle (TCA cycle); Pyruvate metabolism; Alanine and aspartate metabolism; Biosynthesis of ansamycins; Butanoate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id CALVIN-PWY; PWY-5993; PENTOSE-P-PWY; P21-PWY; PWY-1861; P124-PWY; NONOXIPENT-PWY; P185-PWY; PWY-5979; PHOTOALL-PWY; PWY-5723;
metacyc_pathway_name Calvin-Benson-Bassham cycle;; superpathway of rifamycin B biosynthesis;; pentose phosphate pathway;; pentose phosphate pathway (partial);; formaldehyde assimilation II (assimilatory RuMP Cycle);; Bifidobacterium shunt;; pentose phosphate pathway (non-oxidative branch);; formaldehyde assimilation III (dihydroxyacetone cycle);; 3-amino-5-hydroxybenzoate biosynthesis;; oxygenic photosynthesis;; Rubisco shunt;;
metacyc_pathway_type Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; Antibiotic-Biosynthesis; Super-Pathways;; Pentose-Phosphate-Cycle; Super-Pathways;; Pentose-Phosphate-Cycle;; Formaldehyde-Assimilation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Pentose-Phosphate-Cycle;; Formaldehyde-Assimilation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Photosynthesis; Super-Pathways;; Energy-Metabolism;;
pfam_acc PF13292; PF00676; PF02775; PF02780; PF00456; PF02779;
pfam_desc 1-deoxy-D-xylulose-5-phosphate synthase; Dehydrogenase E1 component; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Transketolase, C-terminal domain; Transketolase, thiamine diphosphate binding domain; Transketolase, pyrimidine binding domain;
pfam_id DXP_synthase_N; E1_dh; TPP_enzyme_C; Transketolase_C; Transketolase_N; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF13292.6 evalue:5.9e-05 score:21.6 best_domain_score:14.2 name:DXP_synthase_N; db:Pfam-A.hmm|PF00676.20 evalue:1.3e-05 score:23.5 best_domain_score:22.7 name:E1_dh; db:Pfam-A.hmm|PF02775.21 evalue:3.3e-06 score:26.2 best_domain_score:20.5 name:TPP_enzyme_C; db:Pfam-A.hmm|PF02780.20 evalue:6.4e-09 score:35.0 best_domain_score:33.9 name:Transketolase_C; db:Pfam-A.hmm|PF00456.21 evalue:2.6e-153 score:509.1 best_domain_score:508.7 name:Transketolase_N; db:Pfam-A.hmm|PF02779.24 evalue:7.5e-45 score:152.0 best_domain_score:148.6 name:Transket_pyr;
sprot_desc Transketolase;
sprot_id sp|Q9KAD7|TKT_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KAD7|TKT_BACHD 1 666 evalue:5.6e-286 qcov:100.00 identity:70.60;
tigrfam_acc TIGR00232;
tigrfam_desc transketolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tktlase_bact;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00232 evalue:1.5e-286 score:951.2 best_domain_score:951.0 name:TIGR00232;
75220 75441 CDS
ID metaerg.pl|00785
allgo_ids GO:0016021; GO:0005886;
allko_ids K09976;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584021.1 1 73 evalue:7.5e-28 qcov:100.00 identity:100.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF03672;
pfam_desc Uncharacterised protein family (UPF0154);
pfam_id UPF0154;
pfam_target db:Pfam-A.hmm|PF03672.13 evalue:9.6e-31 score:104.9 best_domain_score:104.7 name:UPF0154;
sprot_desc hypothetical protein;
sprot_id sp|A8FDQ3|Y1692_BACP2;
sprot_target db:uniprot_sprot|sp|A8FDQ3|Y1692_BACP2 1 70 evalue:5.1e-23 qcov:95.90 identity:82.90;
tm_num 1;
75220 75441 transmembrane_helix
ID metaerg.pl|00786
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology o75229-75297i;
75596 76660 CDS
ID metaerg.pl|00787
allec_ids 2.5.1.-; 2.9.1.-;
allgo_ids GO:0016765; GO:0043828; GO:0070329; GO:0002098;
allko_ids K01011; K02439; K01738; K06917;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584023.1 1 354 evalue:4.4e-190 qcov:100.00 identity:94.60;
kegg_pathway_id 00272; 00450; 00920;
kegg_pathway_name Cysteine metabolism; Selenoamino acid metabolism; Sulfur metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id POLYISOPRENSYN-PWY; PWY-5783; PWY-5805; PWY-6262; PWY-5861; PWY-724; PWY-6263; PWY-5808; PWY-5897; PWY-5132; PWY-2681; PWY-5068; PWY-5862; PWY-5845; PWY-5896; PWY-5863; PWY-5816; PWY-5898; PWY-6404; PWY-5806; PWY-5135; PWY-5140; PWY-5701; PWY-6520; PWY-5134; PWY-5899; PWY-5064; PWY-4502; PWY-5838; PWY-6403; PWY-5817; PWY-6129; PWY-5864; PWY-5133; PWY-5893; PWY-5027; PWY-6383;
metacyc_pathway_name polyisoprenoid biosynthesis (E. coli);; octaprenyl diphosphate biosynthesis;; nonaprenyl diphosphate biosynthesis I;; demethylmenaquinol-8 biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of menaquinol-8 biosynthesis II;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; lupulone and humulone biosynthesis;; trans-zeatin biosynthesis;; chlorophyll cycle;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of phylloquinol biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of menaquinol-12 biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; xanthohumol biosynthesis;; cannabinoid biosynthesis;; shikonin biosynthesis;; nonaprenyl diphosphate biosynthesis II;; superpathway of bitter acids biosynthesis;; superpathway of menaquinol-13 biosynthesis;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; carrageenan biosynthesis;; dodecaprenyl diphosphate biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; superpathway of plastoquinol biosynthesis;; colupulone and cohumulone biosynthesis;; tridecaprenyl diphosphate biosynthesis;; phylloquinol biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;;
metacyc_pathway_type Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Demethylmenaquinol-8-Biosynthesis;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; CYTOKININ-BIOSYNTHESIS;; Chlorophyll-a-Biosynthesis;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; PRENYLFLAVONOID-SYN;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Polysaccharides-Biosynthesis;; Polyprenyl-Biosynthesis;; Lipid-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;;
pfam_acc PF00581;
pfam_desc Rhodanese-like domain;
pfam_id Rhodanese;
pfam_target db:Pfam-A.hmm|PF00581.20 evalue:9.6e-09 score:35.0 best_domain_score:31.2 name:Rhodanese;
sprot_desc tRNA 2-selenouridine synthase;
sprot_id sp|Q0AFI5|SELU_NITEC;
sprot_target db:uniprot_sprot|sp|Q0AFI5|SELU_NITEC 5 261 evalue:7.6e-24 qcov:72.60 identity:30.50;
tigrfam_acc TIGR03167;
tigrfam_desc tRNA 2-selenouridine synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name tRNA_sel_U_synt;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03167 evalue:1.2e-86 score:290.1 best_domain_score:289.9 name:TIGR03167;
76664 78415 CDS
ID metaerg.pl|00788
allec_ids 7.6.2.2;
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887;
allko_ids K06861; K02071; K01996; K02045; K11072; K02052; K02006; K02010; K02017; K02023; K02000; K10111; K01995; K18889;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584025.1 1 583 evalue:7.8e-311 qcov:100.00 identity:96.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:3.2e-43 score:147.6 best_domain_score:147.2 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:3.7e-27 score:94.8 best_domain_score:93.9 name:ABC_tran;
sprot_desc Multidrug resistance-like ATP-binding protein MdlA;
sprot_id sp|P77265|MDLA_ECOLI;
sprot_target db:uniprot_sprot|sp|P77265|MDLA_ECOLI 1 582 evalue:1.1e-147 qcov:99.80 identity:47.80;
tm_num 5;
76664 78415 transmembrane_helix
ID metaerg.pl|00789
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i76724-76783o76826-76894i77123-77191o77402-77470i77507-77566o;
78408 80183 CDS
ID metaerg.pl|00790
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887;
allko_ids K01995; K02045; K06861; K01996; K02006; K02052; K18890;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584027.1 1 590 evalue:0.0e+00 qcov:99.80 identity:97.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:1.7e-47 score:161.6 best_domain_score:160.9 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:1.5e-31 score:109.0 best_domain_score:107.9 name:ABC_tran;
sprot_desc Putative ABC transporter ATP-binding protein exp8;
sprot_id sp|P35598|EXP8_STRPN;
sprot_target db:uniprot_sprot|sp|P35598|EXP8_STRPN 14 589 evalue:3.6e-127 qcov:97.50 identity:44.30;
tm_num 5;
78408 80183 transmembrane_helix
ID metaerg.pl|00791
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i78507-78575o78603-78671i78843-78911o78924-78983i79173-79241o;
80430 80924 CDS
ID metaerg.pl|00792
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584029.1 1 164 evalue:3.0e-77 qcov:100.00 identity:97.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF07301;
pfam_desc Protein of unknown function (DUF1453);
pfam_id DUF1453;
pfam_target db:Pfam-A.hmm|PF07301.11 evalue:1.7e-51 score:173.3 best_domain_score:173.1 name:DUF1453;
sprot_desc hypothetical protein;
sprot_id sp|P45710|CCDC_BACSU;
sprot_target db:uniprot_sprot|sp|P45710|CCDC_BACSU 1 156 evalue:6.9e-36 qcov:95.10 identity:50.00;
tm_num 5;
80430 80924 transmembrane_helix
ID metaerg.pl|00793
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology o80439-80492i80529-80582o80595-80654i80715-80783o80793-80861i;
81487 81050 CDS
ID metaerg.pl|00794
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584031.1 1 145 evalue:5.6e-75 qcov:100.00 identity:98.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF11084;
pfam_desc Protein of unknown function (DUF2621);
pfam_id DUF2621;
pfam_target db:Pfam-A.hmm|PF11084.8 evalue:2.9e-72 score:240.3 best_domain_score:240.2 name:DUF2621;
sprot_desc hypothetical protein;
sprot_id sp|P45711|YNEK_BACSU;
sprot_target db:uniprot_sprot|sp|P45711|YNEK_BACSU 1 138 evalue:1.5e-47 qcov:95.20 identity:62.30;
tm_num 1;
81487 81050 transmembrane_helix
ID metaerg.pl|00795
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology o81062-81130i;
81697 81601 tRNA
ID metaerg.pl|00796
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
name tRNA_seC_tca;
81794 83665 CDS
ID metaerg.pl|00797
allgo_ids GO:0003924; GO:0005525; GO:0005737; GO:0003746; GO:0001514;
allko_ids K00860; K00956; K00955;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584033.1 1 623 evalue:0.0e+00 qcov:100.00 identity:90.20;
kegg_pathway_id 00230; 00920; 00450;
kegg_pathway_name Purine metabolism; Sulfur metabolism; Selenoamino acid metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00009; PF03144; PF01926; PF09106; PF09107; PF09439;
pfam_desc Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; 50S ribosome-binding GTPase; Elongation factor SelB, winged helix ; Elongation factor SelB, winged helix ; Signal recognition particle receptor beta subunit;
pfam_id GTP_EFTU; GTP_EFTU_D2; MMR_HSR1; SelB-wing_2; SelB-wing_3; SRPRB;
pfam_target db:Pfam-A.hmm|PF00009.27 evalue:9.9e-30 score:102.8 best_domain_score:100.7 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:9.4e-13 score:47.6 best_domain_score:45.9 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF01926.23 evalue:1.8e-06 score:27.2 best_domain_score:25.3 name:MMR_HSR1; db:Pfam-A.hmm|PF09106.11 evalue:4.1e-06 score:26.1 best_domain_score:24.5 name:SelB-wing_2; db:Pfam-A.hmm|PF09107.11 evalue:6.7e-15 score:53.7 best_domain_score:52.2 name:SelB-wing_3; db:Pfam-A.hmm|PF09439.10 evalue:2.4e-06 score:26.4 best_domain_score:25.1 name:SRPRB;
sprot_desc Selenocysteine-specific elongation factor;
sprot_id sp|Q46455|SELB_MOOTH;
sprot_target db:uniprot_sprot|sp|Q46455|SELB_MOOTH 4 620 evalue:9.1e-113 qcov:99.00 identity:38.80;
tigrfam_acc TIGR00231; TIGR00475;
tigrfam_desc small GTP-binding protein domain; selenocysteine-specific translation elongation factor;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; selB;
tigrfam_sub1role General; Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:4.5e-13 score:48.5 best_domain_score:47.5 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00475 evalue:3.3e-109 score:365.3 best_domain_score:365.1 name:TIGR00475;
84806 83829 CDS
ID metaerg.pl|00798
allec_ids 2.7.9.3;
allgo_ids GO:0005524; GO:0000287; GO:0004756; GO:0016260;
allko_ids K01008;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584035.1 1 325 evalue:2.1e-178 qcov:100.00 identity:95.70;
kegg_pathway_id 00450;
kegg_pathway_name Selenoamino acid metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-6281; PWY0-901;
metacyc_pathway_name L-selenocysteine biosynthesis II (archaea and eukaryotes);; L-selenocysteine biosynthesis I (bacteria);;
metacyc_pathway_type Selenocysteine-Biosynthesis;; Selenocysteine-Biosynthesis;;
pfam_acc PF00586; PF02769;
pfam_desc AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain;
pfam_id AIRS; AIRS_C;
pfam_target db:Pfam-A.hmm|PF00586.24 evalue:1.6e-19 score:69.5 best_domain_score:68.0 name:AIRS; db:Pfam-A.hmm|PF02769.22 evalue:6.7e-27 score:93.8 best_domain_score:92.2 name:AIRS_C;
sprot_desc Selenide, water dikinase;
sprot_id sp|Q8R8W3|SELD_CALS4;
sprot_target db:uniprot_sprot|sp|Q8R8W3|SELD_CALS4 11 318 evalue:7.9e-84 qcov:94.80 identity:54.30;
tigrfam_acc TIGR00476;
tigrfam_desc selenide, water dikinase;
tigrfam_name selD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00476 evalue:1e-112 score:375.5 best_domain_score:375.3 name:TIGR00476;
85452 86870 CDS
ID metaerg.pl|00799
allec_ids 2.9.1.1;
allgo_ids GO:0005737; GO:0004125; GO:0001514; GO:0097056;
allko_ids K01042;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584039.1 1 472 evalue:1.2e-232 qcov:100.00 identity:89.00;
kegg_pathway_id 00450;
kegg_pathway_name Selenoamino acid metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY0-901;
metacyc_pathway_name L-selenocysteine biosynthesis I (bacteria);;
metacyc_pathway_type Selenocysteine-Biosynthesis;;
pfam_acc PF03841;
pfam_desc L-seryl-tRNA selenium transferase;
pfam_id SelA;
pfam_target db:Pfam-A.hmm|PF03841.13 evalue:3.5e-132 score:440.1 best_domain_score:439.8 name:SelA;
sprot_desc L-seryl-tRNA(Sec) selenium transferase;
sprot_id sp|Q0TNJ4|SELA_CLOP1;
sprot_target db:uniprot_sprot|sp|Q0TNJ4|SELA_CLOP1 11 471 evalue:1.3e-92 qcov:97.70 identity:44.20;
tigrfam_acc TIGR00474;
tigrfam_desc L-seryl-tRNA(Sec) selenium transferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name selA;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00474 evalue:4.3e-154 score:512.9 best_domain_score:512.7 name:TIGR00474;
87017 89740 CDS
ID metaerg.pl|00800
allec_ids 4.2.1.-; 4.2.1.3;
allgo_ids GO:0005829; GO:0047456; GO:0051539; GO:0003994; GO:0046872; GO:0003730; GO:0003729; GO:0006101; GO:0019679; GO:0043937; GO:0006099;
allko_ids K01705; K01704; K01703; K01682; K01702; K01681;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584041.1 1 907 evalue:0.0e+00 qcov:100.00 identity:97.90;
kegg_pathway_id 00300; 00020; 00630; 00720; 00290;
kegg_pathway_name Lysine biosynthesis; Citrate cycle (TCA cycle); Glyoxylate and dicarboxylate metabolism; Reductive carboxylate cycle (CO2 fixation); Valine, leucine and isoleucine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5367; GLYOXYLATE-BYPASS; FERMENTATION-PWY; PWY-5392; REDCITCYC; PWY-561; PWY-5184; BENZCOA-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-6007; PWY-5464; P23-PWY; PWY-6113; CENTBENZCOA-PWY; PWY-6549; PWY-5690; P105-PWY; PWYG-321; ANARESP1-PWY; PWY1A0-6325; TCA-GLYOX-BYPASS; PWY0-881; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; CARNMET-PWY; TCA; PWY-5750; PWY-5061; FASYN-ELONG-PWY; PWY-5913;
metacyc_pathway_name petroselinate biosynthesis;; glyoxylate cycle;; mixed acid fermentation;; reductive TCA cycle II;; TCA cycle VIII (Helicobacter);; superpathway of glyoxylate cycle and fatty acid degradation;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis II;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; reductive TCA cycle I;; superpathway of mycolate biosynthesis;; benzoyl-CoA degradation II (anaerobic);; L-glutamine biosynthesis III;; TCA cycle II (plants and fungi);; TCA cycle IV (2-oxoglutarate decarboxylase);; mycolate biosynthesis;; ; actinorhodin biosynthesis;; superpathway of glyoxylate bypass and TCA;; superpathway of fatty acid biosynthesis I (E. coli);; 4-hydroxyphenylacetate degradation;; L-carnitine degradation I;; TCA cycle I (prokaryotic);; itaconate biosynthesis I;; 6,7,4'-trihydroxyisoflavone biosynthesis;; fatty acid elongation -- saturated;; partial TCA cycle (obligate autotrophs);;
metacyc_pathway_type Unsaturated-Fatty-Acids-Biosynthesis;; Energy-Metabolism;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Reductive-TCA-Cycles;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Energy-Metabolism; Super-Pathways;; DMNT-Biosynthesis;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Fatty-acid-biosynthesis; Super-Pathways;; Benzoyl-CoA-Degradation;; GLUTAMINE-SYN;; TCA-VARIANTS;; TCA-VARIANTS;; Fatty-acid-biosynthesis;; ; Antibiotic-Biosynthesis;; Super-Pathways; TCA-VARIANTS;; Fatty-acid-biosynthesis; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; CARN-DEG;; TCA-VARIANTS;; Itaconate-Biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis;; TCA-VARIANTS;;
pfam_acc PF00330; PF00694;
pfam_desc Aconitase family (aconitate hydratase); Aconitase C-terminal domain;
pfam_id Aconitase; Aconitase_C;
pfam_target db:Pfam-A.hmm|PF00330.20 evalue:3e-176 score:586.2 best_domain_score:585.8 name:Aconitase; db:Pfam-A.hmm|PF00694.19 evalue:9.2e-44 score:148.2 best_domain_score:147.2 name:Aconitase_C;
sprot_desc Aconitate/2-methylaconitate hydratase;
sprot_id sp|P09339|ACNA_BACSU;
sprot_target db:uniprot_sprot|sp|P09339|ACNA_BACSU 3 907 evalue:0.0e+00 qcov:99.80 identity:70.80;
tigrfam_acc TIGR01341;
tigrfam_desc aconitate hydratase 1;
tigrfam_mainrole Energy metabolism;
tigrfam_name aconitase_1;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01341 evalue:0 score:1467.2 best_domain_score:1467.0 name:TIGR01341;
90297 90779 CDS
ID metaerg.pl|00801
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584043.1 1 160 evalue:8.9e-74 qcov:100.00 identity:86.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF04892;
pfam_desc VanZ like family;
pfam_id VanZ;
pfam_target db:Pfam-A.hmm|PF04892.12 evalue:1.7e-25 score:89.3 best_domain_score:89.1 name:VanZ;
tm_num 4;
90297 90779 transmembrane_helix
ID metaerg.pl|00802
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i90333-90401o90492-90560i90597-90656o90699-90752i;
91391 90714 CDS
ID metaerg.pl|00803
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584045.1 1 225 evalue:4.8e-110 qcov:100.00 identity:92.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF09335;
pfam_desc SNARE associated Golgi protein;
pfam_id SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF09335.11 evalue:4.9e-17 score:61.8 best_domain_score:61.8 name:SNARE_assoc;
sprot_desc hypothetical protein;
sprot_id sp|P54449|YQED_BACSU;
sprot_target db:uniprot_sprot|sp|P54449|YQED_BACSU 1 203 evalue:8.9e-10 qcov:90.20 identity:25.40;
tm_num 6;
91391 90714 transmembrane_helix
ID metaerg.pl|00804
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i90726-90779o90822-90890i90927-90995o91068-91136i91155-91223o91251-91319i;
91757 94051 CDS
ID metaerg.pl|00805
allgo_ids GO:0005524;
allko_ids K02340; K02343; K00733; K02341;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584047.1 1 764 evalue:0.0e+00 qcov:100.00 identity:89.80;
kegg_pathway_id 03030; 01030;
kegg_pathway_name DNA replication; Glycan structures - biosynthesis 1;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00004; PF13191; PF13238; PF13245; PF07724; PF13401; PF13604; PF07728; PF17866; PF01078; PF03266; PF00910; PF05496; PF00158; PF01443;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA ATPase domain; AAA domain; AAA domain; AAA domain (Cdc48 subfamily); AAA domain; AAA domain; AAA domain (dynein-related subfamily); AAA lid domain; Magnesium chelatase, subunit ChlI; NTPase; RNA helicase; Holliday junction DNA helicase RuvB P-loop domain; Sigma-54 interaction domain; Viral (Superfamily 1) RNA helicase;
pfam_id AAA; AAA_16; AAA_18; AAA_19; AAA_2; AAA_22; AAA_30; AAA_5; AAA_lid_6; Mg_chelatase; NTPase_1; RNA_helicase; RuvB_N; Sigma54_activat; Viral_helicase1;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:2.5e-36 score:124.2 best_domain_score:64.1 name:AAA; db:Pfam-A.hmm|PF13191.6 evalue:2.9e-09 score:36.8 best_domain_score:17.0 name:AAA_16; db:Pfam-A.hmm|PF13238.6 evalue:9.6e-08 score:31.9 best_domain_score:18.5 name:AAA_18; db:Pfam-A.hmm|PF13245.6 evalue:3.9e-09 score:36.2 best_domain_score:20.3 name:AAA_19; db:Pfam-A.hmm|PF07724.14 evalue:3.5e-07 score:29.7 best_domain_score:17.8 name:AAA_2; db:Pfam-A.hmm|PF13401.6 evalue:2e-10 score:40.3 best_domain_score:15.3 name:AAA_22; db:Pfam-A.hmm|PF13604.6 evalue:1e-09 score:37.6 best_domain_score:19.2 name:AAA_30; db:Pfam-A.hmm|PF07728.14 evalue:3.9e-10 score:39.1 best_domain_score:18.8 name:AAA_5; db:Pfam-A.hmm|PF17866.1 evalue:1.6e-10 score:40.2 best_domain_score:30.0 name:AAA_lid_6; db:Pfam-A.hmm|PF01078.21 evalue:6.9e-09 score:34.6 best_domain_score:14.0 name:Mg_chelatase; db:Pfam-A.hmm|PF03266.15 evalue:4.4e-07 score:29.2 best_domain_score:14.4 name:NTPase_1; db:Pfam-A.hmm|PF00910.22 evalue:3e-08 score:33.2 best_domain_score:19.7 name:RNA_helicase; db:Pfam-A.hmm|PF05496.12 evalue:4.1e-09 score:35.6 best_domain_score:19.1 name:RuvB_N; db:Pfam-A.hmm|PF00158.26 evalue:2.3e-09 score:36.4 best_domain_score:22.2 name:Sigma54_activat; db:Pfam-A.hmm|PF01443.18 evalue:4e-05 score:22.7 best_domain_score:13.4 name:Viral_helicase1;
tigrfam_acc TIGR02881;
tigrfam_desc stage V sporulation protein K;
tigrfam_mainrole Cellular processes;
tigrfam_name spore_V_K;
tigrfam_sub1role Sporulation and germination;
tigrfam_target db:TIGRFAMs.hmm|TIGR02881 evalue:2.3e-148 score:491.5 best_domain_score:258.6 name:TIGR02881;
94053 94475 CDS
ID metaerg.pl|00806
allec_ids 3.1.2.-;
allgo_ids GO:0006633; GO:0016790; GO:0016787;
allko_ids K07107;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584049.1 1 140 evalue:8.6e-73 qcov:100.00 identity:95.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY0-1337; ALL-CHORISMATE-PWY; PWY-5897; PWY-5996; PWY-6453; PWY-981; PWY-5791; PWY-5861; PWY-5838; PWY-5850; PWY-5899; PWY-5840; PWY-6320; PWY-5837; PWY-5896; PWY-5845; PWY-5862; PWY-5860; PWY-5898; PWY-5863;
metacyc_pathway_name oleate β-oxidation;; superpathway of chorismate metabolism;; superpathway of menaquinol-11 biosynthesis;; oleate biosynthesis II (animals and fungi);; stigma estolide biosynthesis;; salicylate biosynthesis II;; ; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-8 biosynthesis I;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-7 biosynthesis;; phaselate biosynthesis;; 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-6 biosynthesis I;; superpathway of menaquinol-12 biosynthesis;; superpathway of phylloquinol biosynthesis;;
metacyc_pathway_type Fatty-Acid-Degradation;; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Oleate-Biosynthesis;; Lipid-Biosynthesis;; Salicylate-Biosynthesis;; ; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; AROMATIC-COMPOUNDS-BIOSYN;; DHNA-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF03061; PF13279; PF01643;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily; Acyl-ACP thioesterase;
pfam_id 4HBT; 4HBT_2; Acyl-ACP_TE;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:6.7e-14 score:51.2 best_domain_score:50.9 name:4HBT; db:Pfam-A.hmm|PF13279.6 evalue:2.7e-09 score:36.8 best_domain_score:36.6 name:4HBT_2; db:Pfam-A.hmm|PF01643.17 evalue:2.5e-07 score:29.5 best_domain_score:28.3 name:Acyl-ACP_TE;
sprot_desc Putative acyl-CoA thioesterase YneP;
sprot_id sp|Q45061|YNEP_BACSU;
sprot_target db:uniprot_sprot|sp|Q45061|YNEP_BACSU 7 137 evalue:4.8e-38 qcov:93.60 identity:51.10;
tigrfam_acc TIGR00051;
tigrfam_desc acyl-CoA thioester hydrolase, YbgC/YbaW family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00051;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00051 evalue:1.1e-28 score:99.1 best_domain_score:98.8 name:TIGR00051;
94606 94929 CDS
ID metaerg.pl|00807
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584051.1 1 106 evalue:3.6e-55 qcov:99.10 identity:95.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
sprot_desc hypothetical protein;
sprot_id sp|Q45062|YNEQ_BACSU;
sprot_target db:uniprot_sprot|sp|Q45062|YNEQ_BACSU 1 96 evalue:1.2e-28 qcov:89.70 identity:55.20;
95023 95853 CDS
ID metaerg.pl|00808
allec_ids 6.3.1.5;
allgo_ids GO:0005524; GO:0046872; GO:0003952; GO:0008795; GO:0009435;
allko_ids K01916;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584053.1 1 276 evalue:1.1e-148 qcov:100.00 identity:96.70;
kegg_pathway_id 00910; 00760;
kegg_pathway_name Nitrogen metabolism; Nicotinate and nicotinamide metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY0-781; PYRIDNUCSYN-PWY;
metacyc_pathway_name aspartate superpathway;; NAD de novo biosynthesis I (from aspartate);;
metacyc_pathway_type Super-Pathways;; NAD-SYN;;
pfam_acc PF02540;
pfam_desc NAD synthase;
pfam_id NAD_synthase;
pfam_target db:Pfam-A.hmm|PF02540.17 evalue:1.1e-68 score:230.2 best_domain_score:229.9 name:NAD_synthase;
sprot_desc NH(3)-dependent NAD(+) synthetase;
sprot_id sp|Q9KAK2|NADE_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KAK2|NADE_BACHD 5 275 evalue:8.4e-95 qcov:98.20 identity:63.10;
tigrfam_acc TIGR00552;
tigrfam_desc NAD+ synthetase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name nadE;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00552 evalue:2.5e-74 score:248.8 best_domain_score:248.6 name:TIGR00552;
95853 96701 CDS
ID metaerg.pl|00809
allgo_ids GO:0003824;
allko_ids K02337; K02323; K03763; K04486;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584055.1 1 282 evalue:7.8e-150 qcov:100.00 identity:94.00;
kegg_pathway_id 03030; 00340;
kegg_pathway_name DNA replication; Histidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF02811;
pfam_desc PHP domain;
pfam_id PHP;
pfam_target db:Pfam-A.hmm|PF02811.19 evalue:1.6e-11 score:44.0 best_domain_score:43.4 name:PHP;
96714 97925 CDS
ID metaerg.pl|00810
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584057.1 1 403 evalue:2.3e-219 qcov:100.00 identity:92.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00563; PF10388;
pfam_desc EAL domain; EAL-domain associated signalling protein domain;
pfam_id EAL; YkuI_C;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:4.7e-22 score:77.9 best_domain_score:77.4 name:EAL; db:Pfam-A.hmm|PF10388.9 evalue:9.6e-39 score:132.1 best_domain_score:130.8 name:YkuI_C;
sprot_desc Uncharacterized EAL-domain containing protein YkuI;
sprot_id sp|O35014|YKUI_BACSU;
sprot_target db:uniprot_sprot|sp|O35014|YKUI_BACSU 5 400 evalue:1.3e-59 qcov:98.30 identity:34.40;
97955 99109 CDS
ID metaerg.pl|00811
allgo_ids GO:0005351; GO:0008643; GO:0016020;
allko_ids K05820; K08219; K08217;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584058.1 1 384 evalue:1.4e-205 qcov:100.00 identity:96.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01306; PF07690; PF12832; PF03825;
pfam_desc LacY proton/sugar symporter; Major Facilitator Superfamily; MFS_1 like family; Nucleoside H+ symporter;
pfam_id LacY_symp; MFS_1; MFS_1_like; Nuc_H_symport;
pfam_target db:Pfam-A.hmm|PF01306.19 evalue:2.6e-13 score:48.8 best_domain_score:48.2 name:LacY_symp; db:Pfam-A.hmm|PF07690.16 evalue:1.4e-16 score:59.6 best_domain_score:58.1 name:MFS_1; db:Pfam-A.hmm|PF12832.7 evalue:4.9e-53 score:179.6 best_domain_score:178.7 name:MFS_1_like; db:Pfam-A.hmm|PF03825.16 evalue:8.7e-17 score:60.4 best_domain_score:59.9 name:Nuc_H_symport;
tm_num 12;
97955 99109 transmembrane_helix
ID metaerg.pl|00812
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i97991-98059o98069-98137i98171-98224o98237-98305i98339-98407o98417-98485i98555-98599o98657-98725i98744-98797o98825-98893i98930-98998o99008-99076i;
99500 100165 CDS
ID metaerg.pl|00813
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584060.1 1 221 evalue:4.0e-109 qcov:100.00 identity:92.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF09335;
pfam_desc SNARE associated Golgi protein;
pfam_id SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF09335.11 evalue:6.6e-23 score:80.7 best_domain_score:80.7 name:SNARE_assoc;
tm_num 6;
99500 100165 transmembrane_helix
ID metaerg.pl|00814
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i99518-99571o99662-99730i99743-99811o99902-99970i99989-100057o100070-100138i;
100165 101115 CDS
ID metaerg.pl|00815
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584062.1 1 316 evalue:2.0e-141 qcov:100.00 identity:82.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF09972;
pfam_desc Predicted membrane protein (DUF2207);
pfam_id DUF2207;
pfam_target db:Pfam-A.hmm|PF09972.9 evalue:1.9e-24 score:85.6 best_domain_score:85.3 name:DUF2207;
tm_num 2;
100165 101115 transmembrane_helix
ID metaerg.pl|00816
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology o100174-100227i100642-100695o;
101854 101084 CDS
ID metaerg.pl|00817
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584064.1 1 256 evalue:2.1e-138 qcov:100.00 identity:93.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
101917 102420 CDS
ID metaerg.pl|00818
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584066.1 1 167 evalue:8.9e-85 qcov:100.00 identity:97.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF14183;
pfam_desc YwpF-like protein;
pfam_id YwpF;
pfam_target db:Pfam-A.hmm|PF14183.6 evalue:1.2e-47 score:160.5 best_domain_score:160.1 name:YwpF;
sprot_desc hypothetical protein;
sprot_id sp|P94588|YWPF_BACSU;
sprot_target db:uniprot_sprot|sp|P94588|YWPF_BACSU 1 139 evalue:3.7e-21 qcov:83.20 identity:36.70;
102891 103682 CDS
ID metaerg.pl|00819
allec_ids 3.1.3.-; 5.2.1.8;
allgo_ids GO:0000413; GO:0003755; GO:0016787; GO:0046872;
allko_ids K03768;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584222.1 16 263 evalue:9.3e-121 qcov:94.30 identity:90.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5083; PWY-882; PWY-6456; PWY-5491; NADPHOS-DEPHOS-PWY;
metacyc_pathway_name NAD/NADH phosphorylation and dephosphorylation;; L-ascorbate biosynthesis I (L-galactose pathway);; serinol biosynthesis;; diethylphosphate degradation;; NAD phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; Ascorbate-Biosynthesis;; Polyamine-Biosynthesis;; Phosphorus-Compounds;; NAD-Metabolism;;
pfam_acc PF00160;
pfam_desc Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;
pfam_id Pro_isomerase;
pfam_target db:Pfam-A.hmm|PF00160.21 evalue:1.8e-51 score:173.8 best_domain_score:172.8 name:Pro_isomerase;
sp YES;
sprot_desc Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase;
sprot_id sp|Q5XAQ1|BPPI_STRP6;
sprot_target db:uniprot_sprot|sp|Q5XAQ1|BPPI_STRP6 71 261 evalue:5.4e-51 qcov:72.60 identity:53.40;
102891 102953 lipoprotein_signal_peptide
ID metaerg.pl|00820
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
104053 103859 CDS
ID metaerg.pl|00821
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584070.1 1 64 evalue:4.7e-26 qcov:100.00 identity:98.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
sp YES;
tm_num 2;
103859 103933 signal_peptide
ID metaerg.pl|00822
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
104053 103859 transmembrane_helix
ID metaerg.pl|00823
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i103871-103939o103967-104035i;
104798 105442 CDS
ID metaerg.pl|00824
allko_ids K06950;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584224.1 30 214 evalue:3.1e-82 qcov:86.40 identity:82.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01966;
pfam_desc HD domain;
pfam_id HD;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:1.2e-09 score:37.7 best_domain_score:36.4 name:HD;
sprot_desc hypothetical protein;
sprot_id sp|P54168|YPGQ_BACSU;
sprot_target db:uniprot_sprot|sp|P54168|YPGQ_BACSU 7 212 evalue:4.5e-27 qcov:96.30 identity:35.10;
105511 106035 CDS
ID metaerg.pl|00825
allec_ids 3.5.1.124;
allgo_ids GO:0005737; GO:0008233;
allko_ids K05520;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584074.1 1 173 evalue:8.4e-94 qcov:99.40 identity:96.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01965;
pfam_desc DJ-1/PfpI family;
pfam_id DJ-1_PfpI;
pfam_target db:Pfam-A.hmm|PF01965.24 evalue:8.5e-47 score:158.2 best_domain_score:158.1 name:DJ-1_PfpI;
sprot_desc Deglycase PH1704;
sprot_id sp|O59413|DEGLY_PYRHO;
sprot_target db:uniprot_sprot|sp|O59413|DEGLY_PYRHO 7 172 evalue:7.0e-39 qcov:95.40 identity:48.80;
tigrfam_acc TIGR01382;
tigrfam_desc intracellular protease, PfpI family;
tigrfam_mainrole Protein fate;
tigrfam_name PfpI;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01382 evalue:4.5e-52 score:175.2 best_domain_score:175.0 name:TIGR01382;
106246 107196 CDS
ID metaerg.pl|00826
allko_ids K01048;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584076.1 1 316 evalue:2.7e-167 qcov:100.00 identity:90.50;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:5.9e-11 score:41.7 best_domain_score:35.3 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:1.6e-12 score:47.8 best_domain_score:47.5 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:1.2e-33 score:115.6 best_domain_score:115.2 name:Hydrolase_4;
107352 107978 CDS
ID metaerg.pl|00827
allgo_ids GO:0031419; GO:0046872;
allko_ids K01844; K00548;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584077.1 1 208 evalue:3.3e-105 qcov:100.00 identity:92.80;
kegg_pathway_id 00670; 00271; 00310;
kegg_pathway_name One carbon pool by folate; Methionine metabolism; Lysine degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF02310; PF02607;
pfam_desc B12 binding domain; B12 binding domain;
pfam_id B12-binding; B12-binding_2;
pfam_target db:Pfam-A.hmm|PF02310.19 evalue:1.4e-13 score:50.2 best_domain_score:49.7 name:B12-binding; db:Pfam-A.hmm|PF02607.17 evalue:2.7e-08 score:33.3 best_domain_score:31.6 name:B12-binding_2;
107938 108720 CDS
ID metaerg.pl|00828
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584079.1 1 257 evalue:8.6e-127 qcov:98.80 identity:92.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
108858 109385 CDS
ID metaerg.pl|00829
allec_ids 3.5.1.-;
allgo_ids GO:0005975; GO:0016810;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584081.1 6 175 evalue:2.2e-86 qcov:97.10 identity:90.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-1822; PWY-6548; PWY-0; PWY-5784; LYSDEGII-PWY; PWY-5327;
metacyc_pathway_name indole-3-acetate activation I;; ; putrescine degradation III;; indole-3-acetate inactivation VIII;; L-lysine degradation III;; superpathway of L-lysine degradation;;
metacyc_pathway_type Activation;; ; Putrescine-Degradation;; Indole-3-Acetate-Inactivation;; LYSINE-DEG;; LYSINE-DEG; Super-Pathways;;
pfam_acc PF01522;
pfam_desc Polysaccharide deacetylase;
pfam_id Polysacc_deac_1;
pfam_target db:Pfam-A.hmm|PF01522.21 evalue:1.3e-17 score:63.0 best_domain_score:62.6 name:Polysacc_deac_1;
sprot_desc Uncharacterized 30.6 kDa protein in fumA 3'region;
sprot_id sp|Q04729|YFUM2_GEOSE;
sprot_target db:uniprot_sprot|sp|Q04729|YFUM2_GEOSE 3 158 evalue:1.2e-17 qcov:89.10 identity:30.40;
109549 111834 CDS
ID metaerg.pl|00830
allec_ids 3.6.4.-;
allgo_ids GO:0003676; GO:0005524; GO:0004386;
allko_ids K10896; K01509; K05591; K05592; K03725; K06877;
casgene_acc cd09639_cas3_CAS-I; cd09710_cas3_CAS-I-D; mkCas0139_cas3_CAS-I;
casgene_name cas3; cas3; cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:1.6e-08 score:33.2 best_domain_score:32.5 name:cas3; db:casgenes.hmm|cd09710_cas3_CAS-I-D evalue:9.7e-12 score:43.8 best_domain_score:38.3 name:cas3; db:casgenes.hmm|mkCas0139_cas3_CAS-I evalue:2.1e-11 score:41.8 best_domain_score:36.0 name:cas3;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584083.1 1 759 evalue:0.0e+00 qcov:99.70 identity:98.60;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00270; PF09369; PF00271; PF04851;
pfam_desc DEAD/DEAH box helicase; Domain of unknown function (DUF1998); Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit;
pfam_id DEAD; DUF1998; Helicase_C; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:2.6e-28 score:98.2 best_domain_score:95.8 name:DEAD; db:Pfam-A.hmm|PF09369.10 evalue:1e-19 score:70.3 best_domain_score:69.1 name:DUF1998; db:Pfam-A.hmm|PF00271.31 evalue:2.2e-15 score:56.2 best_domain_score:51.5 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:2e-10 score:40.2 best_domain_score:38.7 name:ResIII;
sprot_desc Uncharacterized ATP-dependent helicase YprA;
sprot_id sp|P50830|YPRA_BACSU;
sprot_target db:uniprot_sprot|sp|P50830|YPRA_BACSU 4 756 evalue:1.2e-287 qcov:98.90 identity:63.90;
111831 113033 CDS
ID metaerg.pl|00831
allko_ids K07502;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584085.1 1 400 evalue:5.2e-208 qcov:100.00 identity:90.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF13482;
pfam_desc RNase_H superfamily;
pfam_id RNase_H_2;
pfam_target db:Pfam-A.hmm|PF13482.6 evalue:3.6e-40 score:136.9 best_domain_score:136.0 name:RNase_H_2;
sprot_desc hypothetical protein;
sprot_id sp|P50837|YPRB_BACSU;
sprot_target db:uniprot_sprot|sp|P50837|YPRB_BACSU 1 394 evalue:5.0e-64 qcov:98.50 identity:39.60;
113023 114927 CDS
ID metaerg.pl|00832
allgo_ids GO:0008773;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584087.1 1 634 evalue:0.0e+00 qcov:100.00 identity:97.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00027; PF03445; PF10335;
pfam_desc Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294; Putative nucleotidyltransferase substrate binding domain;
pfam_id cNMP_binding; DUF294; DUF294_C;
pfam_target db:Pfam-A.hmm|PF00027.29 evalue:8e-15 score:53.9 best_domain_score:53.0 name:cNMP_binding; db:Pfam-A.hmm|PF03445.13 evalue:5e-44 score:148.7 best_domain_score:147.8 name:DUF294; db:Pfam-A.hmm|PF10335.9 evalue:6.8e-34 score:116.0 best_domain_score:115.1 name:DUF294_C;
114930 115670 CDS
ID metaerg.pl|00833
allec_ids 2.7.7.7;
allko_ids K02342;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:2.4e-36 score:124.5 best_domain_score:124.1 name:DEDDh;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584089.1 1 245 evalue:1.1e-115 qcov:99.60 identity:83.30;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00929;
pfam_desc Exonuclease;
pfam_id RNase_T;
pfam_target db:Pfam-A.hmm|PF00929.24 evalue:1e-24 score:87.2 best_domain_score:86.5 name:RNase_T;
tigrfam_acc TIGR00573;
tigrfam_desc exonuclease, DNA polymerase III, epsilon subunit family;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnaq;
tigrfam_sub1role Degradation of DNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00573 evalue:2.5e-22 score:78.6 best_domain_score:77.9 name:TIGR00573;
115805 116362 CDS
ID metaerg.pl|00834
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584226.1 1 185 evalue:7.8e-98 qcov:100.00 identity:95.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF06908;
pfam_desc YspA SLOG family;
pfam_id YpsA;
pfam_target db:Pfam-A.hmm|PF06908.11 evalue:2.6e-57 score:192.7 best_domain_score:192.5 name:YpsA;
sprot_desc hypothetical protein;
sprot_id sp|C5D2K0|Y1907_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D2K0|Y1907_GEOSW 5 179 evalue:3.2e-42 qcov:94.60 identity:47.40;
116410 116715 CDS
ID metaerg.pl|00835
allgo_ids GO:0005737; GO:0007049; GO:0051301; GO:0008360;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584091.1 1 101 evalue:3.6e-49 qcov:100.00 identity:100.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF05103;
pfam_desc DivIVA protein;
pfam_id DivIVA;
pfam_target db:Pfam-A.hmm|PF05103.13 evalue:7e-17 score:61.0 best_domain_score:60.3 name:DivIVA;
sprot_desc Cell cycle protein GpsB;
sprot_id sp|A4IN56|GPSB_GEOTN;
sprot_target db:uniprot_sprot|sp|A4IN56|GPSB_GEOTN 6 101 evalue:2.9e-21 qcov:95.00 identity:60.40;
tigrfam_acc TIGR03544;
tigrfam_desc DivIVA domain;
tigrfam_name DivI1A_domain;
tigrfam_target db:TIGRFAMs.hmm|TIGR03544 evalue:1.8e-13 score:49.0 best_domain_score:48.5 name:TIGR03544;
116725 117132 CDS
ID metaerg.pl|00836
allgo_ids GO:0003676; GO:0004523; GO:0046872;
allko_ids K03469;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584093.1 1 135 evalue:1.8e-64 qcov:100.00 identity:93.30;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00075; PF13456;
pfam_desc RNase H; Reverse transcriptase-like;
pfam_id RNase_H; RVT_3;
pfam_target db:Pfam-A.hmm|PF00075.24 evalue:1.5e-14 score:53.7 best_domain_score:53.4 name:RNase_H; db:Pfam-A.hmm|PF13456.6 evalue:2.4e-18 score:65.3 best_domain_score:65.1 name:RVT_3;
sprot_desc 14.7 kDa ribonuclease H-like protein;
sprot_id sp|P54162|RNHL_BACSU;
sprot_target db:uniprot_sprot|sp|P54162|RNHL_BACSU 3 131 evalue:5.5e-23 qcov:95.60 identity:43.40;
117659 118792 CDS
ID metaerg.pl|00837
allec_ids 2.1.1.-;
allgo_ids GO:0003723; GO:0008990; GO:0070043;
allko_ids K07444;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584095.1 1 377 evalue:9.9e-217 qcov:100.00 identity:98.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5975; PWY-5864; PWY-1061; PWY-5876; PWY-1422; PWYG-321; PWY-5305; PWY-5729; PWY-6113; CODH-PWY; PWY-6442; PWY-6575; PWY-5467; PWY-6477; PWY-3542; ALL-CHORISMATE-PWY; PWY-6153; PWY-5041; PWY-4021; PWY-5328; METHIONINE-DEG1-PWY; PWY-6519; PWY-5773; PWY-5116; PWY-1581; CO2FORM-PWY; PWY-5479; PWY-5987; PWY-6292; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-6427; PWY-6395; PWY-6146; PWY-6303; PWY-5857; PWY-6151; PWY-5209; PWY-5855; PWY-5856; UBISYN-PWY; PWY-6154; PWY-6424; PWY-6142; METH-ACETATE-PWY;
metacyc_pathway_name furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; vitamin E biosynthesis (tocopherols);; mycolate biosynthesis;; bixin biosynthesis;; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; gramine biosynthesis;; gibberellin inactivation II (methylation);; choline biosynthesis II;; superpathway of chorismate metabolism;; autoinducer AI-2 biosynthesis I;; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; biotin biosynthesis I;; xanthohumol biosynthesis;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; S-adenosyl-L-methionine cycle I;; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; ubiquinol-9 biosynthesis (prokaryotic);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; gluconeogenesis II (Methanobacterium thermoautotrophicum);; methanogenesis from acetate;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; Fatty-acid-biosynthesis;; APOCAROTENOID-SYN;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Choline-Biosynthesis;; Super-Pathways;; Autoinducer-Biosynthesis;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; LIGNAN-SYN;; QUINONE-SYN;; CYSTEINE-SYN; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; Gluconeogenesis; Super-Pathways;; METHANOGENESIS;;
pfam_acc PF02926; PF01170;
pfam_desc THUMP domain; Putative RNA methylase family UPF0020;
pfam_id THUMP; UPF0020;
pfam_target db:Pfam-A.hmm|PF02926.17 evalue:2.2e-15 score:56.2 best_domain_score:55.6 name:THUMP; db:Pfam-A.hmm|PF01170.18 evalue:2.8e-61 score:205.9 best_domain_score:205.5 name:UPF0020;
sprot_desc Putative RNA methyltransferase YpsC;
sprot_id sp|P50840|YPSC_BACSU;
sprot_target db:uniprot_sprot|sp|P50840|YPSC_BACSU 2 377 evalue:1.2e-123 qcov:99.70 identity:56.90;
118852 119856 CDS
ID metaerg.pl|00838
allec_ids 4.1.99.22;
allgo_ids GO:0006777; GO:0019008; GO:0051539; GO:0061798; GO:0005525; GO:0046872; GO:1904047;
allko_ids K06941; K01843; K03639;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584097.1 1 334 evalue:4.3e-179 qcov:100.00 identity:94.60;
kegg_pathway_id 00310;
kegg_pathway_name Lysine degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF13353; PF13394; PF06463; PF04055;
pfam_desc 4Fe-4S single cluster domain; 4Fe-4S single cluster domain; Molybdenum Cofactor Synthesis C; Radical SAM superfamily;
pfam_id Fer4_12; Fer4_14; Mob_synth_C; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF13353.6 evalue:1.5e-08 score:34.3 best_domain_score:32.8 name:Fer4_12; db:Pfam-A.hmm|PF13394.6 evalue:1.3e-07 score:31.0 best_domain_score:30.0 name:Fer4_14; db:Pfam-A.hmm|PF06463.13 evalue:3.4e-36 score:123.2 best_domain_score:122.5 name:Mob_synth_C; db:Pfam-A.hmm|PF04055.21 evalue:8.1e-34 score:116.6 best_domain_score:115.7 name:Radical_SAM;
sprot_desc GTP 3',8-cyclase;
sprot_id sp|Q65DY5|MOAA_BACLD;
sprot_target db:uniprot_sprot|sp|Q65DY5|MOAA_BACLD 2 334 evalue:3.3e-109 qcov:99.70 identity:58.20;
tigrfam_acc TIGR02666;
tigrfam_desc molybdenum cofactor biosynthesis protein A;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name moaA;
tigrfam_sub1role Molybdopterin;
tigrfam_target db:TIGRFAMs.hmm|TIGR02666 evalue:1.4e-115 score:385.0 best_domain_score:384.8 name:TIGR02666;
120197 119889 CDS
ID metaerg.pl|00839
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584099.1 1 102 evalue:3.3e-42 qcov:100.00 identity:84.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01521;
pfam_desc Iron-sulphur cluster biosynthesis;
pfam_id Fe-S_biosyn;
pfam_target db:Pfam-A.hmm|PF01521.20 evalue:1.6e-09 score:37.2 best_domain_score:36.9 name:Fe-S_biosyn;
120332 121852 CDS
ID metaerg.pl|00840
allec_ids 3.4.17.19;
allgo_ids GO:0004181; GO:0006508; GO:0008270;
allko_ids K01299;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584100.1 1 506 evalue:1.1e-279 qcov:100.00 identity:91.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF02074;
pfam_desc Carboxypeptidase Taq (M32) metallopeptidase;
pfam_id Peptidase_M32;
pfam_target db:Pfam-A.hmm|PF02074.15 evalue:2.4e-181 score:603.0 best_domain_score:602.8 name:Peptidase_M32;
sprot_desc Carboxypeptidase 1;
sprot_id sp|P50848|CBP1_BACSU;
sprot_target db:uniprot_sprot|sp|P50848|CBP1_BACSU 5 506 evalue:1.8e-167 qcov:99.20 identity:54.60;
121904 122863 CDS
ID metaerg.pl|00841
allec_ids 7.6.2.9;
allgo_ids GO:0005524; GO:0016020; GO:0016887; GO:0102908; GO:0031460;
allko_ids K01990; K10243; K02023; K02000; K11962; K01995; K02065; K02049; K02031; K01998; K10112; K10111; K05816; K10235; K11076; K01996; K06861; K02071; K10199; K11072; K02068; K02045; K02003; K01997; K05847; K02010; K02006; K02052; K02004; K11084; K02074; K02017; K02032;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584102.1 1 319 evalue:6.1e-167 qcov:100.00 identity:93.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:5.3e-08 score:32.2 best_domain_score:15.4 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.7e-36 score:124.3 best_domain_score:122.6 name:ABC_tran;
sprot_desc Carnitine transport ATP-binding protein OpuCA;
sprot_id sp|G2JZ44|OPUCA_LISM4;
sprot_target db:uniprot_sprot|sp|G2JZ44|OPUCA_LISM4 1 295 evalue:2.2e-78 qcov:92.50 identity:50.20;
tigrfam_acc TIGR01186;
tigrfam_desc glycine betaine/L-proline transport ATP binding subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name proV;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01186 evalue:7.5e-102 score:340.3 best_domain_score:339.9 name:TIGR01186;
122860 124419 CDS
ID metaerg.pl|00842
allgo_ids GO:0016020; GO:0055085;
allko_ids K02001; K05846; K05845;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584104.1 1 519 evalue:2.2e-267 qcov:100.00 identity:94.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00528; PF04069;
pfam_desc Binding-protein-dependent transport system inner membrane component; Substrate binding domain of ABC-type glycine betaine transport system;
pfam_id BPD_transp_1; OpuAC;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:8.3e-21 score:73.8 best_domain_score:72.8 name:BPD_transp_1; db:Pfam-A.hmm|PF04069.12 evalue:5.8e-49 score:166.2 best_domain_score:165.9 name:OpuAC;
tm_num 5;
122860 124419 transmembrane_helix
ID metaerg.pl|00843
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i122947-123015o123073-123141i123313-123381o123409-123477i123496-123564o;
124470 124892 CDS
ID metaerg.pl|00844
allgo_ids GO:0005737; GO:0005524;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584106.1 1 140 evalue:2.2e-68 qcov:100.00 identity:95.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:3.1e-32 score:111.2 best_domain_score:111.1 name:Usp;
sprot_desc Universal stress protein MJ0577;
sprot_id sp|Q57997|Y577_METJA;
sprot_target db:uniprot_sprot|sp|Q57997|Y577_METJA 1 140 evalue:4.4e-07 qcov:100.00 identity:25.50;
124908 125315 CDS
ID metaerg.pl|00845
allgo_ids GO:0048037;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584108.1 1 135 evalue:1.5e-66 qcov:100.00 identity:95.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF13380;
pfam_desc CoA binding domain;
pfam_id CoA_binding_2;
pfam_target db:Pfam-A.hmm|PF13380.6 evalue:2.8e-35 score:120.6 best_domain_score:120.4 name:CoA_binding_2;
sprot_desc hypothetical protein;
sprot_id sp|Q45065|YNET_BACSU;
sprot_target db:uniprot_sprot|sp|Q45065|YNET_BACSU 3 131 evalue:3.5e-38 qcov:95.60 identity:59.70;
125625 127592 CDS
ID metaerg.pl|00846
allec_ids 5.6.2.3; 5.99.1.-;
allgo_ids GO:0003677; GO:0003918; GO:0005524; GO:0006265; GO:0005694; GO:0046872; GO:0007059;
allko_ids K02622;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584110.1 1 655 evalue:0.0e+00 qcov:100.00 identity:97.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00204; PF00986; PF02518; PF01751;
pfam_desc DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Toprim domain;
pfam_id DNA_gyraseB; DNA_gyraseB_C; HATPase_c; Toprim;
pfam_target db:Pfam-A.hmm|PF00204.25 evalue:3.1e-55 score:185.6 best_domain_score:184.9 name:DNA_gyraseB; db:Pfam-A.hmm|PF00986.21 evalue:3.7e-30 score:103.1 best_domain_score:102.1 name:DNA_gyraseB_C; db:Pfam-A.hmm|PF02518.26 evalue:7.3e-22 score:77.2 best_domain_score:76.2 name:HATPase_c; db:Pfam-A.hmm|PF01751.22 evalue:1.4e-18 score:66.2 best_domain_score:64.9 name:Toprim;
sprot_desc DNA topoisomerase 4 subunit B;
sprot_id sp|Q59192|PARE_BACSU;
sprot_target db:uniprot_sprot|sp|Q59192|PARE_BACSU 2 653 evalue:1.2e-272 qcov:99.50 identity:73.50;
tigrfam_acc TIGR01058;
tigrfam_desc DNA topoisomerase IV, B subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name parE_Gpos;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01058 evalue:0 score:1052.5 best_domain_score:1052.3 name:TIGR01058;
127596 130013 CDS
ID metaerg.pl|00847
allec_ids 5.6.2.3; 5.99.1.-;
allgo_ids GO:0003677; GO:0003916; GO:0005524; GO:0005694; GO:0006265; GO:0005737; GO:0009330; GO:0019897; GO:0003918; GO:0007059;
allko_ids K02621;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584112.1 1 805 evalue:0.0e+00 qcov:100.00 identity:96.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF03989; PF00521;
pfam_desc DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A;
pfam_id DNA_gyraseA_C; DNA_topoisoIV;
pfam_target db:Pfam-A.hmm|PF03989.13 evalue:5.5e-35 score:117.8 best_domain_score:31.5 name:DNA_gyraseA_C; db:Pfam-A.hmm|PF00521.20 evalue:1.6e-150 score:501.0 best_domain_score:500.4 name:DNA_topoisoIV;
sprot_desc DNA topoisomerase 4 subunit A;
sprot_id sp|Q45066|PARC_BACSU;
sprot_target db:uniprot_sprot|sp|Q45066|PARC_BACSU 1 803 evalue:5.7e-285 qcov:99.80 identity:61.00;
tigrfam_acc TIGR01061;
tigrfam_desc DNA topoisomerase IV, A subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name parC_Gpos;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01061 evalue:0 score:1052.8 best_domain_score:1052.6 name:TIGR01061;
130221 131033 CDS
ID metaerg.pl|00848
allgo_ids GO:0003677; GO:0015074;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584114.1 1 270 evalue:5.6e-137 qcov:100.00 identity:93.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF02899; PF13495;
pfam_desc Phage integrase, N-terminal SAM-like domain; Phage integrase, N-terminal SAM-like domain;
pfam_id Phage_int_SAM_1; Phage_int_SAM_4;
pfam_target db:Pfam-A.hmm|PF02899.17 evalue:3.4e-12 score:45.7 best_domain_score:38.3 name:Phage_int_SAM_1; db:Pfam-A.hmm|PF13495.6 evalue:8e-07 score:28.7 best_domain_score:27.3 name:Phage_int_SAM_4;
131664 131179 CDS
ID metaerg.pl|00849
allec_ids 1.5.1.36;
allgo_ids GO:0010181; GO:0036382; GO:0019439;
allko_ids K00492;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584116.1 1 161 evalue:1.1e-84 qcov:100.00 identity:93.80;
kegg_pathway_id 00903; 00360; 00340; 00350; 00680; 00622; 00626; 00624; 00150; 00120; 00361;
kegg_pathway_name Limonene and pinene degradation; Phenylalanine metabolism; Histidine metabolism; Tyrosine metabolism; Methane metabolism; Toluene and xylene degradation; Naphthalene and anthracene degradation; 1- and 2-Methylnaphthalene degradation; Androgen and estrogen metabolism; Bile acid biosynthesis; gamma-Hexachlorocyclohexane degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01613;
pfam_desc Flavin reductase like domain;
pfam_id Flavin_Reduct;
pfam_target db:Pfam-A.hmm|PF01613.18 evalue:1.5e-39 score:134.8 best_domain_score:134.6 name:Flavin_Reduct;
sprot_desc p-hydroxyphenylacetate 3-hydroxylase, reductase component;
sprot_id sp|Q6Q271|HPAHR_ACIBA;
sprot_target db:uniprot_sprot|sp|Q6Q271|HPAHR_ACIBA 7 155 evalue:3.2e-30 qcov:92.50 identity:40.90;
132736 131744 CDS
ID metaerg.pl|00850
allko_ids K00712; K00749; K13677; K12996; K13668; K03844;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584117.1 1 329 evalue:1.0e-153 qcov:99.70 identity:81.50;
kegg_pathway_id 01030; 00510;
kegg_pathway_name Glycan structures - biosynthesis 1; N-Glycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00534; PF13524; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyl transferases group 1; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_trans_1_2; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:1.5e-23 score:82.5 best_domain_score:81.9 name:Glycos_transf_1; db:Pfam-A.hmm|PF13524.6 evalue:1.7e-10 score:40.4 best_domain_score:39.5 name:Glyco_trans_1_2; db:Pfam-A.hmm|PF13692.6 evalue:1.2e-14 score:54.2 best_domain_score:53.3 name:Glyco_trans_1_4;
133211 132819 CDS
ID metaerg.pl|00851
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584119.1 1 130 evalue:3.2e-66 qcov:100.00 identity:95.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF09969;
pfam_desc Uncharacterized conserved protein (DUF2203);
pfam_id DUF2203;
pfam_target db:Pfam-A.hmm|PF09969.9 evalue:1.5e-35 score:121.8 best_domain_score:121.7 name:DUF2203;
134128 133385 CDS
ID metaerg.pl|00852
allec_ids 3.1.3.104;
allgo_ids GO:0003824; GO:0005992; GO:0005829; GO:0000287; GO:0016791; GO:0009231;
allko_ids K21064;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584121.1 1 247 evalue:1.5e-128 qcov:100.00 identity:94.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF12710; PF13419; PF00702; PF08282; PF05116; PF02358;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase; Trehalose-phosphatase;
pfam_id HAD; HAD_2; Hydrolase; Hydrolase_3; S6PP; Trehalose_PPase;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:2.3e-06 score:27.4 best_domain_score:10.6 name:HAD; db:Pfam-A.hmm|PF13419.6 evalue:2.4e-05 score:23.8 best_domain_score:17.4 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:2.1e-10 score:40.4 best_domain_score:22.5 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:1.5e-55 score:187.9 best_domain_score:103.9 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:9.1e-17 score:60.6 best_domain_score:60.3 name:S6PP; db:Pfam-A.hmm|PF02358.16 evalue:0.00014 score:20.3 best_domain_score:10.3 name:Trehalose_PPase;
sprot_desc 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YcsE;
sprot_id sp|P42962|YCSE_BACSU;
sprot_target db:uniprot_sprot|sp|P42962|YCSE_BACSU 5 246 evalue:7.3e-66 qcov:98.00 identity:51.70;
tigrfam_acc TIGR00099; TIGR01484;
tigrfam_desc Cof-like hydrolase; HAD hydrolase, family IIB;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name Cof-subfamily; HAD-SF-IIB;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00099 evalue:8.3e-55 score:185.3 best_domain_score:102.3 name:TIGR00099; db:TIGRFAMs.hmm|TIGR01484 evalue:1.5e-29 score:102.8 best_domain_score:99.7 name:TIGR01484;
134351 134145 CDS
ID metaerg.pl|00853
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584123.1 1 68 evalue:6.7e-23 qcov:100.00 identity:89.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
sp YES;
tm_num 2;
134145 134201 signal_peptide
ID metaerg.pl|00854
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
134351 134145 transmembrane_helix
ID metaerg.pl|00855
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology o134154-134222i134280-134345o;
137974 134408 CDS
ID metaerg.pl|00856
allgo_ids GO:0005525; GO:0005524; GO:0003924; GO:0090529;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584125.1 1 1188 evalue:0.0e+00 qcov:100.00 identity:94.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00350; PF02421; PF01926; PF03193;
pfam_desc Dynamin family; Ferrous iron transport protein B; 50S ribosome-binding GTPase; RsgA GTPase;
pfam_id Dynamin_N; FeoB_N; MMR_HSR1; RsgA_GTPase;
pfam_target db:Pfam-A.hmm|PF00350.23 evalue:1.5e-65 score:219.5 best_domain_score:132.1 name:Dynamin_N; db:Pfam-A.hmm|PF02421.18 evalue:1.1e-09 score:37.2 best_domain_score:23.1 name:FeoB_N; db:Pfam-A.hmm|PF01926.23 evalue:1.3e-21 score:76.0 best_domain_score:38.9 name:MMR_HSR1; db:Pfam-A.hmm|PF03193.16 evalue:5.5e-10 score:38.6 best_domain_score:19.2 name:RsgA_GTPase;
sprot_desc hypothetical protein;
sprot_id sp|P54159|YPBR_BACSU;
sprot_target db:uniprot_sprot|sp|P54159|YPBR_BACSU 3 1158 evalue:4.1e-106 qcov:97.30 identity:27.50;
tigrfam_acc TIGR00231;
tigrfam_desc small GTP-binding protein domain;
tigrfam_mainrole Unknown function;
tigrfam_name small_GTP;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:3.3e-13 score:48.9 best_domain_score:31.6 name:TIGR00231;
138189 138515 CDS
ID metaerg.pl|00857
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584127.1 2 108 evalue:1.6e-39 qcov:99.10 identity:84.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
tm_num 4;
138189 138515 transmembrane_helix
ID metaerg.pl|00858
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i138207-138266o138279-138347i138351-138410o138423-138491i;
139844 138492 CDS
ID metaerg.pl|00859
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584129.1 1 450 evalue:1.0e-223 qcov:100.00 identity:92.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
tm_num 12;
139844 138492 transmembrane_helix
ID metaerg.pl|00860
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i138510-138578o138636-138704i138723-138791o138876-138944i139005-139073o139086-139154i139215-139283o139293-139361i139428-139496o139554-139622i139659-139727o139770-139838i;
140665 139841 CDS
ID metaerg.pl|00861
allec_ids 1.-.-.-;
allgo_ids GO:0003824; GO:0050662; GO:0016491;
allko_ids K12420; K00022;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584131.1 1 274 evalue:8.2e-136 qcov:100.00 identity:90.10;
kegg_pathway_id 00650; 00071; 00062; 00380; 00930; 00280; 00281; 00310;
kegg_pathway_name Butanoate metabolism; Fatty acid metabolism; Fatty acid elongation in mitochondria; Tryptophan metabolism; Caprolactam degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-5469; PWY-5987; PWY-5479; PWY-5826; PWY-2821; PWY-4302; PWY-5271;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;;
pfam_acc PF00106; PF13561; PF08643; PF01370; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; Fungal family of unknown function (DUF1776); NAD dependent epimerase/dehydratase family; KR domain;
pfam_id adh_short; adh_short_C2; DUF1776; Epimerase; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:1.9e-45 score:154.0 best_domain_score:153.5 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.8e-30 score:104.8 best_domain_score:104.6 name:adh_short_C2; db:Pfam-A.hmm|PF08643.10 evalue:1.7e-05 score:23.6 best_domain_score:23.0 name:DUF1776; db:Pfam-A.hmm|PF01370.21 evalue:2.1e-06 score:26.6 best_domain_score:25.9 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:2.5e-11 score:43.0 best_domain_score:41.3 name:KR;
sprot_desc Uncharacterized oxidoreductase SSP1627;
sprot_id sp|Q49WS9|Y1627_STAS1;
sprot_target db:uniprot_sprot|sp|Q49WS9|Y1627_STAS1 1 227 evalue:5.2e-20 qcov:82.80 identity:26.20;
140719 142086 CDS
ID metaerg.pl|00862
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584133.1 1 455 evalue:5.6e-222 qcov:100.00 identity:92.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
tm_num 12;
140719 142086 transmembrane_helix
ID metaerg.pl|00863
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i140737-140790o140818-140877i140977-141045o141103-141171i141232-141300o141313-141381i141442-141510o141523-141582i141658-141726o141769-141837i141898-141966o142009-142077i;
142377 142171 CDS
ID metaerg.pl|00864
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584134.1 1 68 evalue:5.9e-27 qcov:100.00 identity:97.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
142814 142458 CDS
ID metaerg.pl|00865
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584137.1 20 118 evalue:4.6e-43 qcov:83.90 identity:91.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
145222 142955 CDS
ID metaerg.pl|00866
allec_ids 5.6.2.2; 5.99.1.2;
allgo_ids GO:0003677; GO:0003916; GO:0006265; GO:0003917; GO:0000287;
allko_ids K03169;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584138.1 41 755 evalue:0.0e+00 qcov:94.70 identity:94.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01131; PF01751; PF13342;
pfam_desc DNA topoisomerase; Toprim domain; C-terminal repeat of topoisomerase;
pfam_id Topoisom_bac; Toprim; Toprim_Crpt;
pfam_target db:Pfam-A.hmm|PF01131.20 evalue:2.8e-116 score:388.2 best_domain_score:387.6 name:Topoisom_bac; db:Pfam-A.hmm|PF01751.22 evalue:4.1e-10 score:39.1 best_domain_score:34.8 name:Toprim; db:Pfam-A.hmm|PF13342.6 evalue:5.5e-16 score:57.5 best_domain_score:55.8 name:Toprim_Crpt;
sprot_desc DNA topoisomerase 3;
sprot_id sp|P43704|TOP3_HAEIN;
sprot_target db:uniprot_sprot|sp|P43704|TOP3_HAEIN 41 635 evalue:1.3e-81 qcov:78.80 identity:33.90;
tigrfam_acc TIGR01056;
tigrfam_desc DNA topoisomerase III;
tigrfam_mainrole DNA metabolism;
tigrfam_name topB;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01056 evalue:4.5e-170 score:566.6 best_domain_score:566.4 name:TIGR01056;
146251 145391 CDS
ID metaerg.pl|00867
allgo_ids GO:0003676;
allko_ids K00243;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584140.1 1 286 evalue:4.8e-147 qcov:100.00 identity:91.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF17783; PF00575; PF13509;
pfam_desc CvfB-like winged helix domain; S1 RNA binding domain; S1 domain;
pfam_id CvfB_WH; S1; S1_2;
pfam_target db:Pfam-A.hmm|PF17783.1 evalue:3.8e-26 score:89.9 best_domain_score:86.8 name:CvfB_WH; db:Pfam-A.hmm|PF00575.23 evalue:2.4e-07 score:30.2 best_domain_score:12.9 name:S1; db:Pfam-A.hmm|PF13509.6 evalue:1.3e-11 score:43.6 best_domain_score:34.0 name:S1_2;
sprot_desc hypothetical protein;
sprot_id sp|O06747|YITL_BACSU;
sprot_target db:uniprot_sprot|sp|O06747|YITL_BACSU 2 280 evalue:2.0e-54 qcov:97.60 identity:43.00;
147653 146391 CDS
ID metaerg.pl|00868
allec_ids 4.3.1.19;
allgo_ids GO:0004794; GO:0030170; GO:0009097; GO:0006566;
allko_ids K01754; K13034; K01697; K01733; K12339; K01738; K10150;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584142.1 1 420 evalue:7.9e-239 qcov:100.00 identity:99.00;
kegg_pathway_id 00290; 00450; 00750; 00920; 00271; 00272; 00260;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Selenoamino acid metabolism; Vitamin B6 metabolism; Sulfur metabolism; Methionine metabolism; Cysteine metabolism; Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id ILEUSYN-PWY; PWY-3001; PWY-5826; PWY-5437; THREOCAT-PWY; BRANCHED-CHAIN-AA-SYN-PWY;
metacyc_pathway_name L-isoleucine biosynthesis I (from threonine);; superpathway of L-isoleucine biosynthesis I;; hypoglycin biosynthesis;; L-threonine degradation I;; superpathway of L-threonine metabolism;; superpathway of branched chain amino acid biosynthesis;;
metacyc_pathway_type ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; THREONINE-DEG;; Super-Pathways; THREONINE-DEG;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00291; PF00585;
pfam_desc Pyridoxal-phosphate dependent enzyme; C-terminal regulatory domain of Threonine dehydratase;
pfam_id PALP; Thr_dehydrat_C;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:1.2e-77 score:260.5 best_domain_score:260.2 name:PALP; db:Pfam-A.hmm|PF00585.18 evalue:2e-27 score:94.0 best_domain_score:93.3 name:Thr_dehydrat_C;
sprot_desc L-threonine dehydratase biosynthetic IlvA;
sprot_id sp|Q9KC63|ILVA_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KC63|ILVA_BACHD 9 420 evalue:2.4e-165 qcov:98.10 identity:67.00;
tigrfam_acc TIGR02079;
tigrfam_desc threonine dehydratase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name THD1;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR02079 evalue:3.6e-192 score:637.8 best_domain_score:637.6 name:TIGR02079;
148545 147826 CDS
ID metaerg.pl|00869
allec_ids 2.7.7.7;
allko_ids K02342;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:6.9e-36 score:123.0 best_domain_score:122.6 name:DEDDh;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584144.1 1 239 evalue:2.4e-131 qcov:100.00 identity:96.70;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF16473; PF13482; PF00929;
pfam_desc 3' exoribonuclease, RNase T-like; RNase_H superfamily; Exonuclease;
pfam_id DUF5051; RNase_H_2; RNase_T;
pfam_target db:Pfam-A.hmm|PF16473.5 evalue:1.3e-09 score:37.5 best_domain_score:36.3 name:DUF5051; db:Pfam-A.hmm|PF13482.6 evalue:3.4e-05 score:23.1 best_domain_score:20.7 name:RNase_H_2; db:Pfam-A.hmm|PF00929.24 evalue:1.5e-22 score:80.2 best_domain_score:79.8 name:RNase_T;
tigrfam_acc TIGR00573;
tigrfam_desc exonuclease, DNA polymerase III, epsilon subunit family;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnaq;
tigrfam_sub1role Degradation of DNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00573 evalue:6.5e-22 score:77.2 best_domain_score:76.8 name:TIGR00573;
149483 148542 CDS
ID metaerg.pl|00870
allgo_ids GO:0008773;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584146.1 1 313 evalue:4.0e-163 qcov:100.00 identity:92.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF03445; PF10335;
pfam_desc Putative nucleotidyltransferase DUF294; Putative nucleotidyltransferase substrate binding domain;
pfam_id DUF294; DUF294_C;
pfam_target db:Pfam-A.hmm|PF03445.13 evalue:9.7e-30 score:102.4 best_domain_score:101.4 name:DUF294; db:Pfam-A.hmm|PF10335.9 evalue:2.6e-11 score:42.7 best_domain_score:41.5 name:DUF294_C;
150757 149480 CDS
ID metaerg.pl|00871
allgo_ids GO:0008519; GO:0015696; GO:0016020; GO:0016021; GO:0005886;
allko_ids K03320;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584148.1 1 425 evalue:3.7e-228 qcov:100.00 identity:98.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00909;
pfam_desc Ammonium Transporter Family;
pfam_id Ammonium_transp;
pfam_target db:Pfam-A.hmm|PF00909.21 evalue:5.3e-111 score:370.3 best_domain_score:370.2 name:Ammonium_transp;
sprot_desc Putative ammonium transporter sll0108;
sprot_id sp|P54147|Y108_SYNY3;
sprot_target db:uniprot_sprot|sp|P54147|Y108_SYNY3 7 409 evalue:5.3e-88 qcov:94.80 identity:45.70;
tigrfam_acc TIGR00836;
tigrfam_desc ammonium transporter;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name amt;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR00836 evalue:3.3e-118 score:394.3 best_domain_score:394.1 name:TIGR00836;
tm_num 11;
150757 149480 transmembrane_helix
ID metaerg.pl|00872
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology o149507-149575i149609-149677o149765-149824i149843-149911o149954-150022i150056-150124o150167-150235i150254-150322o150332-150385i150419-150487o150545-150613i;
151921 151019 CDS
ID metaerg.pl|00873
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584152.1 1 300 evalue:3.5e-148 qcov:100.00 identity:95.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.1e-46 score:157.6 best_domain_score:89.0 name:EamA;
tm_num 10;
151921 151019 transmembrane_helix
ID metaerg.pl|00874
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i151037-151102o151130-151183i151220-151285o151295-151363i151382-151435o151478-151537i151556-151624o151652-151720i151757-151810o151820-151888i;
152079 153158 CDS
ID metaerg.pl|00875
allec_ids 2.3.-.-;
allgo_ids GO:0016747; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584154.1 1 358 evalue:9.2e-196 qcov:99.70 identity:96.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5826;
metacyc_pathway_name hypoglycin biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;;
pfam_acc PF01757;
pfam_desc Acyltransferase family;
pfam_id Acyl_transf_3;
pfam_target db:Pfam-A.hmm|PF01757.22 evalue:9.1e-22 score:76.8 best_domain_score:76.5 name:Acyl_transf_3;
sprot_desc Putative membrane-bound acyltransferase YfiQ;
sprot_id sp|O31559|YFIQ_BACSU;
sprot_target db:uniprot_sprot|sp|O31559|YFIQ_BACSU 2 353 evalue:1.1e-49 qcov:98.10 identity:36.60;
tm_num 10;
152079 153158 transmembrane_helix
ID metaerg.pl|00876
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i152091-152159o152202-152270i152328-152396o152439-152495i152520-152588o152631-152699i152733-152801o152829-152873i152910-152978o153006-153074i;
154250 153177 CDS
ID metaerg.pl|00877
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584228.1 2 357 evalue:3.0e-199 qcov:99.70 identity:96.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00144;
pfam_desc Beta-lactamase;
pfam_id Beta-lactamase;
pfam_target db:Pfam-A.hmm|PF00144.24 evalue:1.1e-20 score:73.4 best_domain_score:73.0 name:Beta-lactamase;
tm_num 1;
154250 153177 transmembrane_helix
ID metaerg.pl|00878
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i153195-153254o;
154584 154859 CDS
ID metaerg.pl|00879
allko_ids K00928; K12524; K01079; K07166; K12526; K01653;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584158.1 1 91 evalue:1.2e-38 qcov:100.00 identity:98.90;
kegg_pathway_id 00290; 00650; 00660; 00260; 00300; 00770;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Butanoate metabolism; C5-Branched dibasic acid metabolism; Glycine, serine and threonine metabolism; Lysine biosynthesis; Pantothenate and CoA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01842; PF13291; PF13740; PF13840;
pfam_desc ACT domain; ACT domain; ACT domain; ACT domain;
pfam_id ACT; ACT_4; ACT_6; ACT_7;
pfam_target db:Pfam-A.hmm|PF01842.25 evalue:5.3e-11 score:41.3 best_domain_score:40.9 name:ACT; db:Pfam-A.hmm|PF13291.6 evalue:1.7e-10 score:40.6 best_domain_score:39.9 name:ACT_4; db:Pfam-A.hmm|PF13740.6 evalue:7.5e-16 score:57.1 best_domain_score:56.9 name:ACT_6; db:Pfam-A.hmm|PF13840.6 evalue:1.3e-07 score:30.5 best_domain_score:29.9 name:ACT_7;
sprot_desc hypothetical protein;
sprot_id sp|Q97LS6|Y478_CLOAB;
sprot_target db:uniprot_sprot|sp|Q97LS6|Y478_CLOAB 5 91 evalue:1.6e-13 qcov:95.60 identity:45.50;
154871 156232 CDS
ID metaerg.pl|00880
allko_ids K09157;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584160.1 1 453 evalue:8.2e-242 qcov:100.00 identity:97.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF05167;
pfam_desc Uncharacterised ACR (DUF711);
pfam_id DUF711;
pfam_target db:Pfam-A.hmm|PF05167.12 evalue:7.4e-172 score:571.0 best_domain_score:570.7 name:DUF711;
sprot_desc hypothetical protein;
sprot_id sp|A5D3N0|Y987_PELTS;
sprot_target db:uniprot_sprot|sp|A5D3N0|Y987_PELTS 3 453 evalue:1.2e-159 qcov:99.60 identity:63.40;
156613 157734 CDS
ID metaerg.pl|00881
allec_ids 2.7.2.11;
allgo_ids GO:0003723; GO:0005829; GO:0005524; GO:0004349; GO:0055129; GO:0006561;
allko_ids K00931; K12657; K12524; K00928; K00003; K06969; K12525;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584162.1 3 373 evalue:2.4e-199 qcov:99.50 identity:96.20;
kegg_pathway_id 00220; 00260; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Glycine, serine and threonine metabolism; Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id CITRULBIO-PWY; PROSYN-PWY; PWY-5004;
metacyc_pathway_name L-citrulline biosynthesis;; L-proline biosynthesis I;; superpathway of L-citrulline metabolism;;
metacyc_pathway_type Citrulline-Biosynthesis;; PROLINE-SYN;; Citrulline-Biosynthesis; Super-Pathways;;
pfam_acc PF00696; PF01472;
pfam_desc Amino acid kinase family; PUA domain;
pfam_id AA_kinase; PUA;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:2.4e-44 score:151.0 best_domain_score:149.8 name:AA_kinase; db:Pfam-A.hmm|PF01472.20 evalue:5.5e-16 score:57.5 best_domain_score:56.5 name:PUA;
sprot_desc Glutamate 5-kinase 1;
sprot_id sp|P39820|PROB_BACSU;
sprot_target db:uniprot_sprot|sp|P39820|PROB_BACSU 3 360 evalue:2.5e-94 qcov:96.00 identity:49.60;
tigrfam_acc TIGR01027;
tigrfam_desc glutamate 5-kinase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name proB;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01027 evalue:6.8e-117 score:389.8 best_domain_score:389.5 name:TIGR01027;
157724 158998 CDS
ID metaerg.pl|00882
allec_ids 1.2.1.41;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0004350; GO:0050661; GO:0055129;
allko_ids K00147;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584164.1 1 424 evalue:1.2e-215 qcov:100.00 identity:91.50;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id CITRULBIO-PWY; PROSYN-PWY; PWY-5004;
metacyc_pathway_name L-citrulline biosynthesis;; L-proline biosynthesis I;; superpathway of L-citrulline metabolism;;
metacyc_pathway_type Citrulline-Biosynthesis;; PROLINE-SYN;; Citrulline-Biosynthesis; Super-Pathways;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:1.1e-18 score:66.3 best_domain_score:58.0 name:Aldedh;
sprot_desc Gamma-glutamyl phosphate reductase;
sprot_id sp|B7ILK1|PROA_BACC2;
sprot_target db:uniprot_sprot|sp|B7ILK1|PROA_BACC2 3 415 evalue:1.4e-133 qcov:97.40 identity:57.90;
tigrfam_acc TIGR00407;
tigrfam_desc glutamate-5-semialdehyde dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name proA;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00407 evalue:9e-159 score:527.7 best_domain_score:527.4 name:TIGR00407;
159075 160913 CDS
ID metaerg.pl|00883
allgo_ids GO:0003924; GO:0005525; GO:0005829; GO:1990904; GO:0006412;
allko_ids K00955; K03018; K00956; K00860; K06207;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584166.1 1 612 evalue:0.0e+00 qcov:100.00 identity:98.90;
kegg_pathway_id 00920; 00450; 03020; 00230;
kegg_pathway_name Sulfur metabolism; Selenoamino acid metabolism; RNA polymerase; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00679; PF00009; PF03144; PF01926;
pfam_desc Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; 50S ribosome-binding GTPase;
pfam_id EFG_C; GTP_EFTU; GTP_EFTU_D2; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00679.24 evalue:1.2e-24 score:85.4 best_domain_score:83.1 name:EFG_C; db:Pfam-A.hmm|PF00009.27 evalue:8e-56 score:187.9 best_domain_score:186.9 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:3.6e-16 score:58.5 best_domain_score:57.2 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF01926.23 evalue:2.2e-08 score:33.4 best_domain_score:32.4 name:MMR_HSR1;
sprot_desc GTP-binding protein TypA/BipA homolog;
sprot_id sp|O07631|TYPA_BACSU;
sprot_target db:uniprot_sprot|sp|O07631|TYPA_BACSU 1 607 evalue:1.1e-272 qcov:99.20 identity:75.30;
tigrfam_acc TIGR00231; TIGR01394;
tigrfam_desc small GTP-binding protein domain; GTP-binding protein TypA/BipA;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; TypA_BipA;
tigrfam_sub1role General; Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:3.2e-23 score:81.5 best_domain_score:80.6 name:TIGR00231; db:TIGRFAMs.hmm|TIGR01394 evalue:7.5e-282 score:935.0 best_domain_score:934.8 name:TIGR01394;
161310 161579 CDS
ID metaerg.pl|00884
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
tm_num 2;
161310 161579 transmembrane_helix
ID metaerg.pl|00885
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i161409-161477o161505-161564i;
162559 161849 CDS
ID metaerg.pl|00886
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0075713; GO:0046718; GO:0044826;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584168.1 1 236 evalue:1.1e-107 qcov:100.00 identity:87.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00589;
pfam_desc Phage integrase family;
pfam_id Phage_integrase;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:2.7e-20 score:72.1 best_domain_score:70.8 name:Phage_integrase;
sprot_desc Probable integrase/recombinase YoeC;
sprot_id sp|O35009|YOEC_BACSU;
sprot_target db:uniprot_sprot|sp|O35009|YOEC_BACSU 65 234 evalue:6.0e-33 qcov:72.00 identity:41.10;
162727 163122 CDS
ID metaerg.pl|00887
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584170.1 1 131 evalue:4.3e-58 qcov:100.00 identity:85.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF04134;
pfam_desc Protein of unknown function, DUF393;
pfam_id DUF393;
pfam_target db:Pfam-A.hmm|PF04134.12 evalue:9.9e-30 score:103.4 best_domain_score:103.2 name:DUF393;
sprot_desc hypothetical protein;
sprot_id sp|P40761|YUXK_BACSU;
sprot_target db:uniprot_sprot|sp|P40761|YUXK_BACSU 4 130 evalue:7.2e-28 qcov:96.90 identity:48.40;
163937 163119 CDS
ID metaerg.pl|00888
allgo_ids GO:0005886; GO:0071281;
allko_ids K02016;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584172.1 1 272 evalue:9.2e-148 qcov:100.00 identity:92.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01497;
pfam_desc Periplasmic binding protein;
pfam_id Peripla_BP_2;
pfam_target db:Pfam-A.hmm|PF01497.18 evalue:7.4e-30 score:103.5 best_domain_score:103.3 name:Peripla_BP_2;
sprot_desc Uncharacterized ABC transporter substrate-binding lipoprotein YvrC;
sprot_id sp|O34805|YVRC_BACSU;
sprot_target db:uniprot_sprot|sp|O34805|YVRC_BACSU 2 261 evalue:1.1e-27 qcov:95.60 identity:33.00;
165372 164509 CDS
ID metaerg.pl|00889
allec_ids 3.1.11.-;
allgo_ids GO:0003677; GO:0003824; GO:0017108; GO:0004527; GO:0033567;
allko_ids K02335;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584174.1 1 287 evalue:1.5e-151 qcov:100.00 identity:93.70;
kegg_pathway_id 00240; 03030; 03410; 00230; 03440; 03420;
kegg_pathway_name Pyrimidine metabolism; DNA replication; Base excision repair; Purine metabolism; Homologous recombination; Nucleotide excision repair;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01367; PF02739;
pfam_desc 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain;
pfam_id 5_3_exonuc; 5_3_exonuc_N;
pfam_target db:Pfam-A.hmm|PF01367.20 evalue:4e-27 score:93.9 best_domain_score:92.5 name:5_3_exonuc; db:Pfam-A.hmm|PF02739.16 evalue:1.1e-40 score:138.3 best_domain_score:137.9 name:5_3_exonuc_N;
sprot_desc 5'-3' exonuclease;
sprot_id sp|Q9KAV6|EX53_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KAV6|EX53_BACHD 5 262 evalue:5.3e-84 qcov:89.90 identity:59.80;
165976 165479 CDS
ID metaerg.pl|00890
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584176.1 1 165 evalue:1.8e-77 qcov:100.00 identity:83.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
sprot_desc hypothetical protein;
sprot_id sp|O31547|YFJM_BACSU;
sprot_target db:uniprot_sprot|sp|O31547|YFJM_BACSU 1 144 evalue:3.2e-25 qcov:87.30 identity:41.40;
166282 167529 CDS
ID metaerg.pl|00891
allgo_ids GO:0006629;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584178.1 1 415 evalue:8.9e-219 qcov:100.00 identity:92.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01734;
pfam_desc Patatin-like phospholipase;
pfam_id Patatin;
pfam_target db:Pfam-A.hmm|PF01734.22 evalue:1.5e-17 score:63.7 best_domain_score:61.5 name:Patatin;
168695 167622 CDS
ID metaerg.pl|00892
allec_ids 2.6.1.42;
allgo_ids GO:0003824; GO:0052656; GO:0052654; GO:0052655; GO:0009097; GO:0009098; GO:0009099;
allko_ids K00826;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584179.1 1 357 evalue:3.5e-203 qcov:100.00 identity:98.90;
kegg_pathway_id 00280; 00290; 00770;
kegg_pathway_name Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5108; PWY-3001; ALANINE-VALINESYN-PWY; THREOCAT-PWY; VALDEG-PWY; PWY-5101; ILEUDEG-PWY; ILEUSYN-PWY; PWY-5103; PWY-5104; PWY0-1061; LEUSYN-PWY; PWY-5057; PWY-5078; VALSYN-PWY; PWY-5076; LEU-DEG2-PWY; BRANCHED-CHAIN-AA-SYN-PWY;
metacyc_pathway_name L-isoleucine biosynthesis V;; superpathway of L-isoleucine biosynthesis I;; L-alanine biosynthesis I;; superpathway of L-threonine metabolism;; L-valine degradation I;; L-isoleucine biosynthesis II;; L-isoleucine degradation I;; L-isoleucine biosynthesis I (from threonine);; L-isoleucine biosynthesis III;; L-isoleucine biosynthesis IV;; superpathway of L-alanine biosynthesis;; L-leucine biosynthesis;; L-valine degradation II;; L-isoleucine degradation II;; L-valine biosynthesis;; L-leucine degradation III;; L-leucine degradation I;; superpathway of branched chain amino acid biosynthesis;;
metacyc_pathway_type ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; ALANINE-SYN;; Super-Pathways; THREONINE-DEG;; VALINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ALANINE-SYN; Super-Pathways;; LEUCINE-SYN;; VALINE-DEG;; ISOLEUCINE-DEG;; VALINE-BIOSYNTHESIS;; LEUCINE-DEG;; LEUCINE-DEG;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF01063;
pfam_desc Amino-transferase class IV;
pfam_id Aminotran_4;
pfam_target db:Pfam-A.hmm|PF01063.19 evalue:8.2e-33 score:113.4 best_domain_score:113.0 name:Aminotran_4;
sprot_desc Branched-chain-amino-acid aminotransferase 2;
sprot_id sp|P39576|ILVE2_BACSU;
sprot_target db:uniprot_sprot|sp|P39576|ILVE2_BACSU 4 355 evalue:1.6e-125 qcov:98.60 identity:61.60;
tigrfam_acc TIGR01123;
tigrfam_desc branched-chain amino acid aminotransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ilvE_II;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01123 evalue:1.1e-112 score:375.2 best_domain_score:375.0 name:TIGR01123;
170172 168796 CDS
ID metaerg.pl|00893
allec_ids 4.3.2.1;
allgo_ids GO:0005737; GO:0004056; GO:0042450;
allko_ids K01857; K01756; K01744; K01679; K01755;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584181.1 1 458 evalue:7.2e-254 qcov:100.00 identity:97.60;
kegg_pathway_id 00020; 00230; 00720; 00252; 00220; 00330; 00362; 00910;
kegg_pathway_name Citrate cycle (TCA cycle); Purine metabolism; Reductive carboxylate cycle (CO2 fixation); Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Arginine and proline metabolism; Benzoate degradation via hydroxylation; Nitrogen metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-4983; PWY-5154; ARGSYN-PWY; PWY-5004; PWY-4984; PWY-5; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; ARGININE-SYN4-PWY;
metacyc_pathway_name nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);; superpathway of L-citrulline metabolism;; urea cycle;; canavanine biosynthesis;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis II;;
metacyc_pathway_type ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;; Citrulline-Biosynthesis; Super-Pathways;; NITROGEN-DEG;; NON-PROTEIN-AMINO-ACID-SYN;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; L-Ornithine-Biosynthesis;;
pfam_acc PF14698; PF00206;
pfam_desc Argininosuccinate lyase C-terminal; Lyase;
pfam_id ASL_C2; Lyase_1;
pfam_target db:Pfam-A.hmm|PF14698.6 evalue:9.7e-24 score:83.2 best_domain_score:82.0 name:ASL_C2; db:Pfam-A.hmm|PF00206.20 evalue:2.2e-73 score:246.6 best_domain_score:246.1 name:Lyase_1;
sprot_desc Argininosuccinate lyase;
sprot_id sp|Q9K821|ARLY_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K821|ARLY_BACHD 1 456 evalue:1.5e-176 qcov:99.60 identity:66.70;
tigrfam_acc TIGR00838;
tigrfam_desc argininosuccinate lyase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argH;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00838 evalue:3.4e-200 score:665.0 best_domain_score:664.8 name:TIGR00838;
171663 170443 CDS
ID metaerg.pl|00894
allec_ids 6.3.4.5;
allgo_ids GO:0004055; GO:0005524; GO:0006526; GO:0005737;
allko_ids K01940; K01955;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584185.1 1 406 evalue:3.2e-229 qcov:100.00 identity:98.80;
kegg_pathway_id 00240; 00330; 00251; 00252; 00220;
kegg_pathway_name Pyrimidine metabolism; Arginine and proline metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id ARGSYN-PWY; PWY-4983; PWY-5154; PWY-4984; PWY-5004; ARG+POLYAMINE-SYN; PWY-5; ARGSYNBSUB-PWY; ARGININE-SYN4-PWY;
metacyc_pathway_name L-arginine biosynthesis I (via L-ornithine);; nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; urea cycle;; superpathway of L-citrulline metabolism;; superpathway of arginine and polyamine biosynthesis;; canavanine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis II;;
metacyc_pathway_type ARGININE-SYN; Super-Pathways;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN;; NITROGEN-DEG;; Citrulline-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; ARGININE-SYN;; L-Ornithine-Biosynthesis;;
pfam_acc PF00764;
pfam_desc Arginosuccinate synthase;
pfam_id Arginosuc_synth;
pfam_target db:Pfam-A.hmm|PF00764.19 evalue:5.4e-176 score:584.8 best_domain_score:584.6 name:Arginosuc_synth;
sprot_desc Argininosuccinate synthase;
sprot_id sp|Q8ELT8|ASSY_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8ELT8|ASSY_OCEIH 1 402 evalue:1.0e-152 qcov:99.00 identity:63.60;
tigrfam_acc TIGR00032;
tigrfam_desc argininosuccinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argG;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00032 evalue:4e-165 score:549.0 best_domain_score:548.8 name:TIGR00032;
172671 171742 CDS
ID metaerg.pl|00895
allec_ids 2.1.3.3;
allgo_ids GO:0006520; GO:0016597; GO:0016743; GO:0005737; GO:0004585; GO:0006526;
allko_ids K11540; K00609; K01954; K01956; K00611; K01955; K00610; K11541; K13043;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584187.1 1 309 evalue:1.8e-168 qcov:100.00 identity:95.80;
kegg_pathway_id 00252; 00220; 00251; 00330; 00240;
kegg_pathway_name Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Glutamate metabolism; Arginine and proline metabolism; Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5004; PWY-4984; ARGDEGRAD-PWY; ARG+POLYAMINE-SYN; PWY-5; ARGSYNBSUB-PWY; ARGININE-SYN4-PWY; PWY-4981; ARGORNPROST-PWY; ARGSYN-PWY; CITRULLINE-DEG-PWY; CITRULBIO-PWY;
metacyc_pathway_name superpathway of L-citrulline metabolism;; urea cycle;; L-arginine degradation V (arginine deiminase pathway);; superpathway of arginine and polyamine biosynthesis;; canavanine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis II;; L-proline biosynthesis II (from arginine);; L-arginine degradation (Stickland reaction);; L-arginine biosynthesis I (via L-ornithine);; L-citrulline degradation;; L-citrulline biosynthesis;;
metacyc_pathway_type Citrulline-Biosynthesis; Super-Pathways;; NITROGEN-DEG;; ARGININE-DEG; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; PROLINE-SYN;; ARGININE-DEG; Super-Pathways;; ARGININE-SYN; Super-Pathways;; MISCELLANEOUS-DEG;; Citrulline-Biosynthesis;;
pfam_acc PF00185; PF02729;
pfam_desc Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain;
pfam_id OTCace; OTCace_N;
pfam_target db:Pfam-A.hmm|PF00185.24 evalue:7.4e-54 score:181.3 best_domain_score:180.8 name:OTCace; db:Pfam-A.hmm|PF02729.21 evalue:5e-55 score:184.8 best_domain_score:184.4 name:OTCace_N;
sprot_desc Ornithine carbamoyltransferase;
sprot_id sp|B7GM02|OTC_ANOFW;
sprot_target db:uniprot_sprot|sp|B7GM02|OTC_ANOFW 10 308 evalue:5.9e-97 qcov:96.80 identity:59.80;
tigrfam_acc TIGR00658;
tigrfam_desc ornithine carbamoyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name orni_carb_tr;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00658 evalue:8.4e-126 score:418.4 best_domain_score:418.2 name:TIGR00658;
175847 172668 CDS
ID metaerg.pl|00896
allec_ids 6.3.5.5;
allgo_ids GO:0005524; GO:0046872; GO:0004088; GO:0044205; GO:0006526;
allko_ids K01940; K01956; K01948; K01954; K01921; K01968; K01958; K00609; K01960; K11540; K13713; K01589; K01965; K01945; K11541; K01959; K01955; K01941;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584190.1 1 1059 evalue:0.0e+00 qcov:100.00 identity:92.90;
kegg_pathway_id 00640; 00330; 00620; 00251; 00252; 00220; 00473; 00910; 00240; 00020; 00230; 00280; 00550;
kegg_pathway_name Propanoate metabolism; Arginine and proline metabolism; Pyruvate metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; D-Alanine metabolism; Nitrogen metabolism; Pyrimidine metabolism; Citrate cycle (TCA cycle); Purine metabolism; Valine, leucine and isoleucine degradation; Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5686; PRPP-PWY; PWY-5154; ARGSYN-PWY; PWY0-162; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN;
metacyc_pathway_name UMP biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;;
metacyc_pathway_type UMP-Biosynthesis;; Super-Pathways;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;;
pfam_acc PF02222; PF02655; PF13535; PF15632; PF02786; PF02787; PF07478; PF02142;
pfam_desc ATP-grasp domain; ATP-grasp domain; ATP-grasp domain; ATP-grasp in the biosynthetic pathway with Ter operon; Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; D-ala D-ala ligase C-terminus; MGS-like domain;
pfam_id ATP-grasp; ATP-grasp_3; ATP-grasp_4; ATPgrasp_Ter; CPSase_L_D2; CPSase_L_D3; Dala_Dala_lig_C; MGS;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:4e-14 score:51.8 best_domain_score:29.7 name:ATP-grasp; db:Pfam-A.hmm|PF02655.14 evalue:9.6e-15 score:54.2 best_domain_score:34.3 name:ATP-grasp_3; db:Pfam-A.hmm|PF13535.6 evalue:1.2e-06 score:27.4 best_domain_score:16.1 name:ATP-grasp_4; db:Pfam-A.hmm|PF15632.6 evalue:7.1e-14 score:50.9 best_domain_score:26.8 name:ATPgrasp_Ter; db:Pfam-A.hmm|PF02786.17 evalue:5.7e-115 score:381.4 best_domain_score:261.0 name:CPSase_L_D2; db:Pfam-A.hmm|PF02787.19 evalue:1.4e-36 score:124.8 best_domain_score:122.4 name:CPSase_L_D3; db:Pfam-A.hmm|PF07478.13 evalue:2.2e-14 score:52.7 best_domain_score:31.0 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF02142.22 evalue:9e-11 score:41.1 best_domain_score:36.6 name:MGS;
sprot_desc Carbamoyl-phosphate synthase large chain;
sprot_id sp|B0K4D7|CARB_THEPX;
sprot_target db:uniprot_sprot|sp|B0K4D7|CARB_THEPX 1 1040 evalue:1.1e-312 qcov:98.20 identity:53.50;
tigrfam_acc TIGR01369;
tigrfam_desc carbamoyl-phosphate synthase, large subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name CPSaseII_lrg;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01369 evalue:0 score:1415.4 best_domain_score:1415.2 name:TIGR01369;
176920 175826 CDS
ID metaerg.pl|00897
allec_ids 6.3.5.5;
allgo_ids GO:0016787; GO:0005524; GO:0004088; GO:0006207; GO:0006526; GO:0006541; GO:0006221;
allko_ids K11541; K13950; K13497; K01955; K01658; K13501; K01951; K01954; K01665; K01664; K02619; K03342; K01657; K11540; K00609; K01656; K01663; K01956;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584191.1 1 364 evalue:1.1e-201 qcov:100.00 identity:93.70;
kegg_pathway_id 00983; 00230; 00400; 00240; 02020; 00252; 00251; 00620; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism; Two-component system - General; Alanine and aspartate metabolism; Glutamate metabolism; Pyruvate metabolism; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; PWY0-162; ARGSYN-PWY; PWY-5154; PRPP-PWY; PWY-5686;
metacyc_pathway_name L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;;
metacyc_pathway_type ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; Super-Pathways;; UMP-Biosynthesis;;
pfam_acc PF00988; PF00117; PF07722;
pfam_desc Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; Peptidase C26;
pfam_id CPSase_sm_chain; GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00988.22 evalue:2.4e-47 score:159.2 best_domain_score:158.4 name:CPSase_sm_chain; db:Pfam-A.hmm|PF00117.28 evalue:2.6e-42 score:144.0 best_domain_score:143.5 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:3.9e-06 score:26.0 best_domain_score:14.9 name:Peptidase_C26;
sprot_desc Carbamoyl-phosphate synthase arginine-specific small chain;
sprot_id sp|Q9K8V6|CARX_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K8V6|CARX_BACHD 5 357 evalue:4.8e-98 qcov:97.00 identity:48.90;
tigrfam_acc TIGR01368;
tigrfam_desc carbamoyl-phosphate synthase, small subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name CPSaseIIsmall;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01368 evalue:1e-132 score:441.7 best_domain_score:441.5 name:TIGR01368;
178110 176917 CDS
ID metaerg.pl|00898
allec_ids 2.6.1.11;
allgo_ids GO:0008483; GO:0030170; GO:0005737; GO:0003992; GO:0006526;
allko_ids K00821; K05830; K00818;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584193.1 1 397 evalue:2.0e-215 qcov:100.00 identity:93.50;
kegg_pathway_id 00220; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; GLUTORN-PWY; ARGSYN-PWY; PWY-5154;
metacyc_pathway_name L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; L-ornithine biosynthesis I;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);;
metacyc_pathway_type ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; L-Ornithine-Biosynthesis;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:6.1e-111 score:370.2 best_domain_score:369.8 name:Aminotran_3;
sprot_desc Acetylornithine aminotransferase;
sprot_id sp|Q8CUM9|ARGD_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8CUM9|ARGD_OCEIH 1 388 evalue:3.6e-123 qcov:97.70 identity:55.90;
tigrfam_acc TIGR00707;
tigrfam_desc transaminase, acetylornithine/succinylornithine family;
tigrfam_name argD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00707 evalue:3.2e-140 score:466.4 best_domain_score:466.2 name:TIGR00707;
178903 178103 CDS
ID metaerg.pl|00899
allec_ids 2.7.2.8;
allgo_ids GO:0005737; GO:0003991; GO:0005524; GO:0042450;
allko_ids K00930; K12657; K01438; K00931; K00618; K00619; K00145; K00620; K12659;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584195.1 1 266 evalue:1.2e-139 qcov:100.00 identity:94.70;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id GLUTORN-PWY; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; PWY-5154; ARGSYN-PWY;
metacyc_pathway_name L-ornithine biosynthesis I;; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type L-Ornithine-Biosynthesis;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF00696;
pfam_desc Amino acid kinase family;
pfam_id AA_kinase;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:1.4e-37 score:128.8 best_domain_score:128.6 name:AA_kinase;
sprot_desc Acetylglutamate kinase;
sprot_id sp|Q8CUN0|ARGB_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8CUN0|ARGB_OCEIH 1 265 evalue:5.1e-57 qcov:99.60 identity:43.40;
tigrfam_acc TIGR00761;
tigrfam_desc acetylglutamate kinase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argB;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00761 evalue:8.3e-67 score:224.2 best_domain_score:224.0 name:TIGR00761;
180139 178916 CDS
ID metaerg.pl|00900
allec_ids 2.3.1.35; 2.3.1.1; 2.3.1.35 2.3.1.1;
allgo_ids GO:0004358; GO:0006526; GO:0005737; GO:0004042; GO:0103045;
allko_ids K00620;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584197.1 1 407 evalue:1.2e-220 qcov:100.00 identity:98.30;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; GLUTORN-PWY; ARGSYN-PWY; PWY-5154;
metacyc_pathway_name superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis I;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);;
metacyc_pathway_type Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF01960;
pfam_desc ArgJ family;
pfam_id ArgJ;
pfam_target db:Pfam-A.hmm|PF01960.18 evalue:1.1e-148 score:494.2 best_domain_score:494.0 name:ArgJ;
sprot_desc Arginine biosynthesis bifunctional protein ArgJ;
sprot_id sp|Q8CUN1|ARGJ_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8CUN1|ARGJ_OCEIH 9 407 evalue:6.5e-136 qcov:98.00 identity:60.40;
tigrfam_acc TIGR00120;
tigrfam_desc glutamate N-acetyltransferase/amino-acid acetyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ArgJ;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00120 evalue:1.3e-150 score:500.9 best_domain_score:500.6 name:TIGR00120;
181181 180153 CDS
ID metaerg.pl|00901
allec_ids 1.2.1.38;
allgo_ids GO:0016620; GO:0051287; GO:0055114; GO:0005737; GO:0003942; GO:0046983; GO:0006526;
allko_ids K00133; K12659; K00145; K00618; K00930;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584199.1 1 342 evalue:3.0e-188 qcov:100.00 identity:95.90;
kegg_pathway_id 00220; 00260; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Glycine, serine and threonine metabolism; Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5154; ARGSYN-PWY; GLUTORN-PWY; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN;
metacyc_pathway_name L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);; L-ornithine biosynthesis I;; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;;
metacyc_pathway_type ARGININE-SYN;; ARGININE-SYN; Super-Pathways;; L-Ornithine-Biosynthesis;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;;
pfam_acc PF01118; PF02774;
pfam_desc Semialdehyde dehydrogenase, NAD binding domain; Semialdehyde dehydrogenase, dimerisation domain;
pfam_id Semialdhyde_dh; Semialdhyde_dhC;
pfam_target db:Pfam-A.hmm|PF01118.24 evalue:4.8e-32 score:110.2 best_domain_score:109.2 name:Semialdhyde_dh; db:Pfam-A.hmm|PF02774.18 evalue:3.3e-25 score:88.5 best_domain_score:87.9 name:Semialdhyde_dhC;
sprot_desc N-acetyl-gamma-glutamyl-phosphate reductase;
sprot_id sp|Q8CUN2|ARGC_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8CUN2|ARGC_OCEIH 1 342 evalue:2.0e-106 qcov:100.00 identity:55.00;
tigrfam_acc TIGR01850;
tigrfam_desc N-acetyl-gamma-glutamyl-phosphate reductase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argC;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01850 evalue:3.8e-130 score:433.2 best_domain_score:433.1 name:TIGR01850;
182758 181310 CDS
ID metaerg.pl|00902
allec_ids 2.7.8.-;
allgo_ids GO:0003824; GO:0016021; GO:0005886; GO:0008808; GO:0032049; GO:0043934; GO:0055085;
allko_ids K06131;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584200.1 1 482 evalue:2.8e-272 qcov:100.00 identity:97.90;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY4FS-4; PHOSLIPSYN2-PWY; PWY-5668; PWY-6385; PHOSLIPSYN-PWY; TEICHOICACID-PWY;
metacyc_pathway_name phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; cardiolipin biosynthesis I;; peptidoglycan biosynthesis III (mycobacteria);; superpathway of phospholipid biosynthesis I (bacteria);; poly(glycerol phosphate) wall teichoic acid biosynthesis;;
metacyc_pathway_type PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; Teichoic-Acids-Biosynthesis;;
pfam_acc PF00614; PF13091; PF13396;
pfam_desc Phospholipase D Active site motif; PLD-like domain; Phospholipase_D-nuclease N-terminal;
pfam_id PLDc; PLDc_2; PLDc_N;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:2.2e-11 score:42.7 best_domain_score:22.2 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:6.3e-45 score:151.6 best_domain_score:95.8 name:PLDc_2; db:Pfam-A.hmm|PF13396.6 evalue:4.7e-10 score:38.5 best_domain_score:37.3 name:PLDc_N;
sprot_desc Major cardiolipin synthase ClsA;
sprot_id sp|P71040|CLSA_BACSU;
sprot_target db:uniprot_sprot|sp|P71040|CLSA_BACSU 1 482 evalue:9.6e-179 qcov:100.00 identity:63.70;
tigrfam_acc TIGR04265;
tigrfam_desc cardiolipin synthase;
tigrfam_name bac_cardiolipin;
tigrfam_target db:TIGRFAMs.hmm|TIGR04265 evalue:1.9e-190 score:633.1 best_domain_score:632.9 name:TIGR04265;
tm_num 2;
182758 181310 transmembrane_helix
ID metaerg.pl|00903
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology o181319-181387i181406-181474o;
183884 183030 CDS
ID metaerg.pl|00904
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584202.1 1 284 evalue:7.4e-148 qcov:100.00 identity:90.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00144;
pfam_desc Beta-lactamase;
pfam_id Beta-lactamase;
pfam_target db:Pfam-A.hmm|PF00144.24 evalue:2.5e-16 score:59.1 best_domain_score:58.3 name:Beta-lactamase;
184419 183871 CDS
ID metaerg.pl|00905
allec_ids 1.8.4.11;
allgo_ids GO:0008113; GO:0055114; GO:0006464;
allko_ids K07305; K12267; K07304;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584230.1 1 182 evalue:2.2e-92 qcov:100.00 identity:86.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01625;
pfam_desc Peptide methionine sulfoxide reductase;
pfam_id PMSR;
pfam_target db:Pfam-A.hmm|PF01625.21 evalue:4.9e-56 score:188.4 best_domain_score:188.1 name:PMSR;
sprot_desc Peptide methionine sulfoxide reductase MsrA;
sprot_id sp|Q65ID1|MSRA_BACLD;
sprot_target db:uniprot_sprot|sp|Q65ID1|MSRA_BACLD 1 178 evalue:2.9e-67 qcov:97.80 identity:64.60;
tigrfam_acc TIGR00401;
tigrfam_desc peptide-methionine (S)-S-oxide reductase;
tigrfam_mainrole Cellular processes;
tigrfam_name msrA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00401 evalue:1.8e-56 score:189.9 best_domain_score:189.6 name:TIGR00401;
185581 184433 CDS
ID metaerg.pl|00906
allec_ids 1.8.4.11; 1.8.4.12; 1.8.4.-;
allgo_ids GO:0008113; GO:0055114; GO:0033743; GO:0006464; GO:0034599; GO:0009405; GO:0030091;
allko_ids K12267; K07305; K07304;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584232.1 12 381 evalue:2.4e-202 qcov:96.90 identity:95.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF01625; PF01641;
pfam_desc Peptide methionine sulfoxide reductase; SelR domain;
pfam_id PMSR; SelR;
pfam_target db:Pfam-A.hmm|PF01625.21 evalue:4.4e-60 score:201.5 best_domain_score:200.7 name:PMSR; db:Pfam-A.hmm|PF01641.18 evalue:1.3e-32 score:111.6 best_domain_score:110.1 name:SelR;
sp YES;
sprot_desc Peptide methionine sulfoxide reductase MsrA/MsrB;
sprot_id sp|Q9KLX6|MSRAB_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KLX6|MSRAB_VIBCH 38 378 evalue:2.1e-75 qcov:89.30 identity:42.30;
tigrfam_acc TIGR00357; TIGR00401;
tigrfam_desc methionine-R-sulfoxide reductase; peptide-methionine (S)-S-oxide reductase;
tigrfam_mainrole Cellular processes; Cellular processes;
tigrfam_name TIGR00357; msrA;
tigrfam_sub1role Adaptations to atypical conditions; Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00357 evalue:3.1e-42 score:142.9 best_domain_score:142.1 name:TIGR00357; db:TIGRFAMs.hmm|TIGR00401 evalue:5.5e-60 score:201.3 best_domain_score:200.4 name:TIGR00401;
tm_num 1;
184433 184534 signal_peptide
ID metaerg.pl|00907
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
185581 184433 transmembrane_helix
ID metaerg.pl|00908
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i184451-184519o;
186109 185687 CDS
ID metaerg.pl|00909
allgo_ids GO:0006979;
allko_ids K04063;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584204.1 1 140 evalue:5.0e-65 qcov:100.00 identity:90.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF02566;
pfam_desc OsmC-like protein;
pfam_id OsmC;
pfam_target db:Pfam-A.hmm|PF02566.19 evalue:4.2e-17 score:61.7 best_domain_score:61.3 name:OsmC;
sprot_desc Organic hydroperoxide resistance protein OhrB;
sprot_id sp|P80242|OHRB_BACSU;
sprot_target db:uniprot_sprot|sp|P80242|OHRB_BACSU 5 137 evalue:4.5e-36 qcov:95.00 identity:53.40;
tigrfam_acc TIGR03561;
tigrfam_desc peroxiredoxin, Ohr subfamily;
tigrfam_mainrole Cellular processes;
tigrfam_name organ_hyd_perox;
tigrfam_sub1role Detoxification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03561 evalue:5.5e-50 score:168.3 best_domain_score:168.2 name:TIGR03561;
187367 186297 CDS
ID metaerg.pl|00910
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584206.1 1 350 evalue:2.2e-194 qcov:98.30 identity:94.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF03417; PF02275;
pfam_desc Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; Linear amide C-N hydrolases, choloylglycine hydrolase family;
pfam_id AAT; CBAH;
pfam_target db:Pfam-A.hmm|PF03417.16 evalue:1.7e-55 score:187.4 best_domain_score:186.9 name:AAT; db:Pfam-A.hmm|PF02275.18 evalue:1.9e-06 score:27.0 best_domain_score:20.6 name:CBAH;
188013 188528 CDS
ID metaerg.pl|00911
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584208.1 1 170 evalue:1.3e-94 qcov:99.40 identity:97.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
sprot_desc hypothetical protein;
sprot_id sp|O35042|YOCC_BACSU;
sprot_target db:uniprot_sprot|sp|O35042|YOCC_BACSU 11 166 evalue:4.3e-41 qcov:91.20 identity:47.40;
189448 188612 CDS
ID metaerg.pl|00912
allec_ids 2.3.2.-;
allgo_ids GO:0005829; GO:0061929; GO:0016746; GO:0042219;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584210.1 1 278 evalue:4.3e-132 qcov:100.00 identity:82.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-6462; PWY-6463;
metacyc_pathway_name peptidoglycan cross-bridge biosynthesis III (Enterococcus faecalis);; peptidoglycan cross-bridge biosynthesis IV (Weissella viridescens);;
metacyc_pathway_type Peptidoglycan-Cross-Bridge-Biosynthesis;; Peptidoglycan-Cross-Bridge-Biosynthesis;;
pfam_acc PF13772; PF06094;
pfam_desc AIG2-like family; Gamma-glutamyl cyclotransferase, AIG2-like;
pfam_id AIG2_2; GGACT;
pfam_target db:Pfam-A.hmm|PF13772.6 evalue:8e-15 score:54.3 best_domain_score:44.3 name:AIG2_2; db:Pfam-A.hmm|PF06094.12 evalue:6.3e-32 score:110.0 best_domain_score:80.4 name:GGACT;
sprot_desc Putative gamma-glutamylcyclotransferase YkqA;
sprot_id sp|P39759|YKQA_BACSU;
sprot_target db:uniprot_sprot|sp|P39759|YKQA_BACSU 3 275 evalue:1.2e-43 qcov:98.20 identity:38.70;
190383 189466 CDS
ID metaerg.pl|00913
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584212.1 1 305 evalue:1.8e-136 qcov:100.00 identity:85.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
190691 190470 CDS
ID metaerg.pl|00914
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
191681 191079 CDS
ID metaerg.pl|00915
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584214.1 1 200 evalue:2.0e-99 qcov:100.00 identity:91.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
192080 193681 CDS
ID metaerg.pl|00916
allgo_ids GO:0005524; GO:0016887;
allko_ids K02013; K01995; K01990; K02006; K02052; K02045; K06861; K01996;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584216.1 1 533 evalue:3.7e-302 qcov:100.00 identity:99.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF13304; PF00005; PF12848;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; ABC transporter;
pfam_id AAA_21; ABC_tran; ABC_tran_Xtn;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:6.6e-13 score:48.3 best_domain_score:22.0 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.6e-40 score:138.1 best_domain_score:71.8 name:ABC_tran; db:Pfam-A.hmm|PF12848.7 evalue:8e-20 score:69.9 best_domain_score:69.9 name:ABC_tran_Xtn;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YkpA;
sprot_id sp|O31716|YKPA_BACSU;
sprot_target db:uniprot_sprot|sp|O31716|YKPA_BACSU 1 526 evalue:2.0e-225 qcov:98.70 identity:71.70;
197429 193794 CDS
ID metaerg.pl|00917
allec_ids 3.1.-.-; 3.1.-.- 3.6.4.12;
allgo_ids GO:0005524; GO:0005829; GO:0008408; GO:0043140; GO:0003690; GO:0006281; GO:0000724; GO:0000725;
allko_ids K16898;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584218.1 1 1209 evalue:0.0e+00 qcov:99.80 identity:92.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF13245; PF12705; PF00580; PF13361; PF13538;
pfam_desc AAA domain; PD-(D/E)XK nuclease superfamily; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain; UvrD-like helicase C-terminal domain;
pfam_id AAA_19; PDDEXK_1; UvrD-helicase; UvrD_C; UvrD_C_2;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:3.6e-24 score:85.0 best_domain_score:82.6 name:AAA_19; db:Pfam-A.hmm|PF12705.7 evalue:1.4e-12 score:47.3 best_domain_score:44.6 name:PDDEXK_1; db:Pfam-A.hmm|PF00580.21 evalue:1.1e-83 score:280.5 best_domain_score:278.8 name:UvrD-helicase; db:Pfam-A.hmm|PF13361.6 evalue:2.7e-36 score:124.9 best_domain_score:118.0 name:UvrD_C; db:Pfam-A.hmm|PF13538.6 evalue:3e-12 score:45.4 best_domain_score:23.0 name:UvrD_C_2;
sprot_desc ATP-dependent helicase/nuclease subunit A;
sprot_id sp|P23478|ADDA_BACSU;
sprot_target db:uniprot_sprot|sp|P23478|ADDA_BACSU 3 1202 evalue:9.5e-300 qcov:99.10 identity:46.50;
tigrfam_acc TIGR02785;
tigrfam_desc helicase-exonuclease AddAB, AddA subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name addA_Gpos;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02785 evalue:0 score:1322.8 best_domain_score:1322.6 name:TIGR02785;
200889 197422 CDS
ID metaerg.pl|00918
allec_ids 3.1.-.-; 3.1.-.- 3.6.4.12;
allgo_ids GO:0005524; GO:0016787; GO:0051539; GO:0008409; GO:0004003; GO:0003690; GO:0046872; GO:0000724;
allko_ids K16899;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584220.1 1 1155 evalue:0.0e+00 qcov:100.00 identity:94.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF04257; PF12705; PF13361;
pfam_desc Exodeoxyribonuclease V, gamma subunit ; PD-(D/E)XK nuclease superfamily; UvrD-like helicase C-terminal domain;
pfam_id Exonuc_V_gamma; PDDEXK_1; UvrD_C;
pfam_target db:Pfam-A.hmm|PF04257.14 evalue:3.3e-19 score:67.8 best_domain_score:36.9 name:Exonuc_V_gamma; db:Pfam-A.hmm|PF12705.7 evalue:6.5e-56 score:189.3 best_domain_score:187.7 name:PDDEXK_1; db:Pfam-A.hmm|PF13361.6 evalue:7.5e-11 score:41.2 best_domain_score:41.2 name:UvrD_C;
sprot_desc ATP-dependent helicase/deoxyribonuclease subunit B;
sprot_id sp|Q65LK0|ADDB_BACLD;
sprot_target db:uniprot_sprot|sp|Q65LK0|ADDB_BACLD 1 1154 evalue:4.0e-263 qcov:99.90 identity:41.90;
tigrfam_acc TIGR02773;
tigrfam_desc helicase-exonuclease AddAB, AddB subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name addB_Gpos;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02773 evalue:0 score:1248.4 best_domain_score:1248.2 name:TIGR02773;
202555 201221 CDS
ID metaerg.pl|00919
allec_ids 1.14.13.-;
allgo_ids GO:0016491; GO:0055114; GO:0008682; GO:0071949; GO:0016705; GO:0016709; GO:0006744;
allko_ids K03184;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583497.1 1 444 evalue:9.2e-254 qcov:100.00 identity:95.90;
kegg_pathway_id 00130;
kegg_pathway_name Ubiquinone biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id TOLUENE-DEG-2-OH-PWY; PWY-5168; HISHP-PWY; P601-PWY; PWY-5180; PWY-6544; PWY-5195; P421-PWY; PWY-5469; TOLUENE-DEG-4-OH-PWY; PWY-2821; PWY-5181; PWY-321; PWY-5529; PWY-5701; PWY-5479; PWY-5203; HCAMHPDEG-PWY; PWYQT-4472; TOLUENE-DEG-3-OH-PWY; PWY-3022; PWY-5773; PWYQT-4475; PWY-2582; PWY-5531; PWY-5991; PWY-5473; CAMALEXIN-SYN; PWY-5161; M-CRESOL-DEGRADATION-PWY; PWY-1187; PWY-601; PWYQT-4474; PWY-5990; PWYQT-4473; PWY-6014; PWY-681; PWY-6526; PWY-5992; PWY-5183; PWY-5061; PWY-6197; PWYQT-4471; PWY-699; PWY-6059;
metacyc_pathway_name toluene degradation to 2-hydroxypentadienoate I (via o-cresol);; ferulate and sinapate biosynthesis;; L-histidine degradation VI;; (+)-camphor degradation;; toluene degradation I (aerobic) (via o-cresol);; superpathway of C28 brassinosteroid biosynthesis;; artemisinin and arteannuin B biosynthesis;; 4-nitrotoluene degradation I;; sesamin biosynthesis;; toluene degradation to 4-methylphenol;; glucosinolate biosynthesis from phenylalanine;; toluene degradation III (aerobic) (via p-cresol);; cutin biosynthesis;; superpathway of bacteriochlorophyll a biosynthesis;; shikonin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; soybean saponin I biosynthesis;; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; glucosinolate biosynthesis from trihomomethionine;; toluene degradation to 2-hydroxypentadienoate (via 4-methylcatechol);; linamarin biosynthesis;; gossypol biosynthesis;; glucosinolate biosynthesis from hexahomomethionine;; brassinosteroid biosynthesis II;; 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; superpathway of linamarin and lotaustralin biosynthesis;; hydroxycinnamic acid serotonin amides biosynthesis;; camalexin biosynthesis;; 6'-deoxychalcone metabolism;; m-cresol degradation;; glucosinolate biosynthesis from homomethionine;; glucosinolate biosynthesis from tryptophan;; glucosinolate biosynthesis from pentahomomethionine;; lotaustralin biosynthesis;; glucosinolate biosynthesis from tetrahomomethionine;; vernolate biosynthesis I;; dibenzothiophene desulfurization;; limonene degradation III (to perillate);; thalianol and derivatives biosynthesis;; superpathway of aerobic toluene degradation;; 6,7,4'-trihydroxyisoflavone biosynthesis;; chlorinated phenols degradation;; glucosinolate biosynthesis from dihomomethionine;; brassinosteroid biosynthesis I;; dimethyl sulfide degradation II (oxidation);;
metacyc_pathway_type TOLUENE-DEG;; CINNAMATE-SYN;; HISTIDINE-DEG;; Camphor-Degradation;; Super-Pathways; TOLUENE-DEG;; Super-Pathways;; SESQUITERPENE-LACTONE;; 4-Nitrotoluene-Degradation;; LIGNAN-SYN;; TOLUENE-DEG;; GLUCOSINOLATE-SYN;; Super-Pathways; TOLUENE-DEG;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; TRITERPENOID-SYN;; Phenolic-Compounds-Degradation;; GLUCOSINOLATE-SYN;; TOLUENE-DEG;; CYANOGENIC-GLUCOSIDE-SYN;; SESQUITERPENOID-SYN;; GLUCOSINOLATE-SYN;; Brassinosteroid-Biosynthesis;; Chlorophyllide-a-Biosynthesis;; Super-Pathways;; N-CONTAINING-SECONDARY-CMPD-SYN;; INDOLE-PHYTOALEXIN-SYN;; CHALCONE-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;; GLUCOSINOLATE-SYN;; GLUCOSINOLATE-SYN;; GLUCOSINOLATE-SYN;; CYANOGENIC-GLUCOSIDE-SYN;; GLUCOSINOLATE-SYN;; Vernolate-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Limonene-Degradation;; TRITERPENOID-SYN;; Super-Pathways; TOLUENE-DEG;; ISOFLAVONOID-SYN;; Chloroaromatic-Compounds-Degradation;; GLUCOSINOLATE-SYN;; Brassinosteroid-Biosynthesis;; Dimethylsulfide-Degradation;;
pfam_acc PF01266; PF00890; PF01494; PF13450; PF07992; PF08491; PF04820;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; FAD binding domain; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Squalene epoxidase; Tryptophan halogenase;
pfam_id DAO; FAD_binding_2; FAD_binding_3; NAD_binding_8; Pyr_redox_2; SE; Trp_halogenase;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:2.9e-07 score:29.6 best_domain_score:29.2 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.1e-06 score:27.2 best_domain_score:25.7 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:5.4e-41 score:140.2 best_domain_score:139.9 name:FAD_binding_3; db:Pfam-A.hmm|PF13450.6 evalue:3.3e-07 score:29.7 best_domain_score:28.3 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:1e-07 score:30.7 best_domain_score:30.1 name:Pyr_redox_2; db:Pfam-A.hmm|PF08491.10 evalue:6.2e-09 score:34.5 best_domain_score:34.0 name:SE; db:Pfam-A.hmm|PF04820.14 evalue:2.7e-05 score:22.5 best_domain_score:15.0 name:Trp_halogenase;
sprot_desc 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase;
sprot_id sp|P75728|UBIF_ECOLI;
sprot_target db:uniprot_sprot|sp|P75728|UBIF_ECOLI 5 326 evalue:2.9e-12 qcov:72.50 identity:24.20;
203246 202572 CDS
ID metaerg.pl|00920
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583496.1 1 224 evalue:4.5e-108 qcov:100.00 identity:97.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF09335;
pfam_desc SNARE associated Golgi protein;
pfam_id SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF09335.11 evalue:2.2e-23 score:82.2 best_domain_score:82.2 name:SNARE_assoc;
sprot_desc TVP38/TMEM64 family membrane protein YtxB;
sprot_id sp|P06568|YTXB_BACSU;
sprot_target db:uniprot_sprot|sp|P06568|YTXB_BACSU 9 210 evalue:2.3e-34 qcov:90.20 identity:44.10;
tm_num 6;
203246 202572 transmembrane_helix
ID metaerg.pl|00921
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
topology i202584-202637o202680-202748i202767-202835o202953-203021i203040-203108o203118-203186i;
204402 203281 CDS
ID metaerg.pl|00922
allec_ids 1.-.-.-;
allgo_ids GO:0016491; GO:0055114; GO:0005737;
allko_ids K00285;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583495.1 1 370 evalue:1.2e-203 qcov:99.20 identity:94.30;
kegg_pathway_id 00360; 00910;
kegg_pathway_name Phenylalanine metabolism; Nitrogen metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-5271; PWY-4302; PWY-5826; PWY-2821; PWY-5987; PWY-5479; PWY-5469; PWYG-321; PWY-6113;
metacyc_pathway_name abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sesamin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; QUINONE-SYN;; LIGNAN-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF01266; PF13450;
pfam_desc FAD dependent oxidoreductase; NAD(P)-binding Rossmann-like domain;
pfam_id DAO; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:1.4e-53 score:181.9 best_domain_score:181.8 name:DAO; db:Pfam-A.hmm|PF13450.6 evalue:7.3e-05 score:22.2 best_domain_score:22.2 name:NAD_binding_8;
sp YES;
sprot_desc Uncharacterized oxidoreductase YurR;
sprot_id sp|O32159|YURR_BACSU;
sprot_target db:uniprot_sprot|sp|O32159|YURR_BACSU 5 363 evalue:6.0e-104 qcov:96.20 identity:51.50;
203281 203349 signal_peptide
ID metaerg.pl|00923
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
204871 205761 CDS
ID metaerg.pl|00924
allec_ids 4.3.3.7;
allgo_ids GO:0016829; GO:0005737; GO:0008840; GO:0019877; GO:0009089;
allko_ids K01714;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583493.1 1 296 evalue:8.5e-155 qcov:100.00 identity:97.00;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
pfam_acc PF00701;
pfam_desc Dihydrodipicolinate synthetase family;
pfam_id DHDPS;
pfam_target db:Pfam-A.hmm|PF00701.22 evalue:4.4e-107 score:356.3 best_domain_score:356.1 name:DHDPS;
sprot_desc 4-hydroxy-tetrahydrodipicolinate synthase;
sprot_id sp|Q04796|DAPA_BACSU;
sprot_target db:uniprot_sprot|sp|Q04796|DAPA_BACSU 1 280 evalue:1.1e-95 qcov:94.60 identity:61.80;
tigrfam_acc TIGR00674;
tigrfam_desc 4-hydroxy-tetrahydrodipicolinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapA;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00674 evalue:1.5e-108 score:361.2 best_domain_score:361.0 name:TIGR00674;
206446 206261 CDS
ID metaerg.pl|00925
allec_ids 3.5.1.47;
allgo_ids GO:0050118; GO:0019877; GO:0009089;
allko_ids K05823;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583443.1 1 61 evalue:6.2e-28 qcov:100.00 identity:93.40;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 78.7037; 0.0578144; 7.86219; 70.5352; 0.248548;
metacyc_pathway_id PWY-2941;
metacyc_pathway_name L-lysine biosynthesis II;;
metacyc_pathway_type LYSINE-SYN;;
sprot_desc N-acetyldiaminopimelate deacetylase;
sprot_id sp|Q5WF94|DAPEL_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WF94|DAPEL_BACSK 2 45 evalue:9.4e-15 qcov:72.10 identity:72.70;
>Feature NODE_4_length_188394_cov_35.2671
262 338 tRNA
ID metaerg.pl|00926
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
name tRNA_Val_gac;
652 2577 CDS
ID metaerg.pl|00927
allec_ids 6.1.1.3;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0046872; GO:0004829; GO:0000049; GO:0006435;
allko_ids K01868;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725631.1 1 641 evalue:3.6e-275 qcov:100.00 identity:71.50;
kegg_pathway_id 00260; 00970;
kegg_pathway_name Glycine, serine and threonine metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03129; PF02824; PF00587; PF07973;
pfam_desc Anticodon binding domain; TGS domain; tRNA synthetase class II core domain (G, H, P, S and T); Threonyl and Alanyl tRNA synthetase second additional domain;
pfam_id HGTP_anticodon; TGS; tRNA-synt_2b; tRNA_SAD;
pfam_target db:Pfam-A.hmm|PF03129.20 evalue:4.7e-21 score:74.0 best_domain_score:72.6 name:HGTP_anticodon; db:Pfam-A.hmm|PF02824.21 evalue:8.6e-12 score:44.2 best_domain_score:42.7 name:TGS; db:Pfam-A.hmm|PF00587.25 evalue:1.1e-39 score:135.5 best_domain_score:134.5 name:tRNA-synt_2b; db:Pfam-A.hmm|PF07973.14 evalue:2.2e-16 score:58.9 best_domain_score:58.0 name:tRNA_SAD;
sprot_desc Threonine--tRNA ligase;
sprot_id sp|Q0AAL5|SYT_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0AAL5|SYT_ALKEH 1 636 evalue:3.6e-242 qcov:99.20 identity:61.20;
tigrfam_acc TIGR00418;
tigrfam_desc threonine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name thrS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00418 evalue:2.9e-220 score:732.1 best_domain_score:731.9 name:TIGR00418;
2704 3132 CDS
ID metaerg.pl|00928
allgo_ids GO:0006413; GO:0005829; GO:0016020; GO:0043022; GO:0003743; GO:0032790;
allko_ids K02520;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169573.1 1 142 evalue:3.8e-68 qcov:100.00 identity:93.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00707; PF05198;
pfam_desc Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain;
pfam_id IF3_C; IF3_N;
pfam_target db:Pfam-A.hmm|PF00707.22 evalue:1.6e-38 score:129.8 best_domain_score:129.3 name:IF3_C; db:Pfam-A.hmm|PF05198.16 evalue:4.1e-20 score:71.0 best_domain_score:69.8 name:IF3_N;
sprot_desc Translation initiation factor IF-3;
sprot_id sp|Q8P7Z3|IF3_XANCP;
sprot_target db:uniprot_sprot|sp|Q8P7Z3|IF3_XANCP 5 141 evalue:8.5e-51 qcov:96.50 identity:67.90;
tigrfam_acc TIGR00168;
tigrfam_desc translation initiation factor IF-3;
tigrfam_mainrole Protein synthesis;
tigrfam_name infC;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00168 evalue:2.3e-58 score:195.6 best_domain_score:195.5 name:TIGR00168;
3279 3476 CDS
ID metaerg.pl|00929
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02916;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725630.1 1 65 evalue:7.6e-24 qcov:100.00 identity:96.90;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01632;
pfam_desc Ribosomal protein L35;
pfam_id Ribosomal_L35p;
pfam_target db:Pfam-A.hmm|PF01632.19 evalue:2.5e-27 score:94.4 best_domain_score:94.2 name:Ribosomal_L35p;
sprot_desc 50S ribosomal protein L35;
sprot_id sp|Q0AAL7|RL35_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0AAL7|RL35_ALKEH 1 63 evalue:9.1e-16 qcov:96.90 identity:68.30;
tigrfam_GO GO:0000315;
tigrfam_acc TIGR00001;
tigrfam_desc ribosomal protein bL35;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpmI_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00001 evalue:9.8e-27 score:92.2 best_domain_score:92.1 name:TIGR00001;
3492 3848 CDS
ID metaerg.pl|00930
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843; GO:0000027;
allko_ids K02887;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725629.1 1 118 evalue:4.1e-52 qcov:100.00 identity:96.60;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00453;
pfam_desc Ribosomal protein L20;
pfam_id Ribosomal_L20;
pfam_target db:Pfam-A.hmm|PF00453.18 evalue:2.7e-50 score:168.2 best_domain_score:168.0 name:Ribosomal_L20;
sprot_desc 50S ribosomal protein L20;
sprot_id sp|A7FHG4|RL20_YERP3;
sprot_target db:uniprot_sprot|sp|A7FHG4|RL20_YERP3 1 118 evalue:5.4e-43 qcov:100.00 identity:76.30;
tigrfam_acc TIGR01032;
tigrfam_desc ribosomal protein bL20;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplT_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01032 evalue:3.2e-50 score:168.3 best_domain_score:168.2 name:TIGR01032;
3901 4860 CDS
ID metaerg.pl|00931
allec_ids 6.1.1.20;
allgo_ids GO:0000166; GO:0004826; GO:0005524; GO:0005737; GO:0006432; GO:0000287; GO:0000049;
allko_ids K01889;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725628.1 1 319 evalue:9.1e-155 qcov:100.00 identity:84.30;
kegg_pathway_id 00970; 00400;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF02912; PF01409; PF17759;
pfam_desc Aminoacyl tRNA synthetase class II, N-terminal domain; tRNA synthetases class II core domain (F); Phenylalanyl tRNA synthetase beta chain CLM domain;
pfam_id Phe_tRNA-synt_N; tRNA-synt_2d; tRNA_synthFbeta;
pfam_target db:Pfam-A.hmm|PF02912.18 evalue:5.3e-25 score:86.4 best_domain_score:85.7 name:Phe_tRNA-synt_N; db:Pfam-A.hmm|PF01409.20 evalue:6.4e-104 score:346.0 best_domain_score:345.6 name:tRNA-synt_2d; db:Pfam-A.hmm|PF17759.1 evalue:1.8e-05 score:23.5 best_domain_score:20.9 name:tRNA_synthFbeta;
sprot_desc Phenylalanine--tRNA ligase alpha subunit;
sprot_id sp|B4SQH0|SYFA_STRM5;
sprot_target db:uniprot_sprot|sp|B4SQH0|SYFA_STRM5 2 318 evalue:8.4e-123 qcov:99.40 identity:64.70;
tigrfam_acc TIGR00468;
tigrfam_desc phenylalanine--tRNA ligase, alpha subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name pheS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00468 evalue:2.7e-108 score:361.2 best_domain_score:248.2 name:TIGR00468;
4879 7254 CDS
ID metaerg.pl|00932
allec_ids 6.1.1.20;
allgo_ids GO:0003723; GO:0004826; GO:0005737; GO:0005524; GO:0000287; GO:0000049; GO:0006432;
allko_ids K01890;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725627.1 1 791 evalue:0.0e+00 qcov:100.00 identity:73.60;
kegg_pathway_id 00970; 00400;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03483; PF03484; PF03147; PF01588; PF17759;
pfam_desc B3/4 domain; tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; Phenylalanyl tRNA synthetase beta chain CLM domain;
pfam_id B3_4; B5; FDX-ACB; tRNA_bind; tRNA_synthFbeta;
pfam_target db:Pfam-A.hmm|PF03483.17 evalue:5.4e-65 score:217.5 best_domain_score:217.0 name:B3_4; db:Pfam-A.hmm|PF03484.15 evalue:7.3e-21 score:73.5 best_domain_score:71.7 name:B5; db:Pfam-A.hmm|PF03147.14 evalue:1.6e-24 score:85.4 best_domain_score:84.2 name:FDX-ACB; db:Pfam-A.hmm|PF01588.20 evalue:5.9e-22 score:76.8 best_domain_score:76.1 name:tRNA_bind; db:Pfam-A.hmm|PF17759.1 evalue:3.5e-56 score:189.3 best_domain_score:188.8 name:tRNA_synthFbeta;
sprot_desc Phenylalanine--tRNA ligase beta subunit;
sprot_id sp|Q60AY9|SYFB_METCA;
sprot_target db:uniprot_sprot|sp|Q60AY9|SYFB_METCA 1 790 evalue:1.6e-210 qcov:99.90 identity:48.90;
tigrfam_acc TIGR00472;
tigrfam_desc phenylalanine--tRNA ligase, beta subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name pheT_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00472 evalue:2.5e-245 score:815.6 best_domain_score:815.4 name:TIGR00472;
7259 7558 CDS
ID metaerg.pl|00933
allgo_ids GO:0003677; GO:0006310; GO:0006355; GO:0006417;
allko_ids K04764;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725626.1 1 99 evalue:2.4e-45 qcov:100.00 identity:94.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00216; PF18291;
pfam_desc Bacterial DNA-binding protein; HU domain fused to wHTH, Ig, or Glycine-rich motif;
pfam_id Bac_DNA_binding; HU-HIG;
pfam_target db:Pfam-A.hmm|PF00216.21 evalue:1.7e-31 score:107.5 best_domain_score:107.4 name:Bac_DNA_binding; db:Pfam-A.hmm|PF18291.1 evalue:3.8e-07 score:29.5 best_domain_score:29.2 name:HU-HIG;
sprot_desc Integration host factor subunit alpha;
sprot_id sp|B4SQG8|IHFA_STRM5;
sprot_target db:uniprot_sprot|sp|B4SQG8|IHFA_STRM5 1 99 evalue:2.8e-40 qcov:100.00 identity:80.80;
tigrfam_acc TIGR00987;
tigrfam_desc integration host factor, alpha subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name himA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00987 evalue:1.9e-46 score:155.6 best_domain_score:155.4 name:TIGR00987;
7539 7895 CDS
ID metaerg.pl|00934
allgo_ids GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725625.1 1 118 evalue:3.6e-56 qcov:100.00 identity:94.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00376; PF13411;
pfam_desc MerR family regulatory protein; MerR HTH family regulatory protein;
pfam_id MerR; MerR_1;
pfam_target db:Pfam-A.hmm|PF00376.23 evalue:1.8e-10 score:39.6 best_domain_score:38.8 name:MerR; db:Pfam-A.hmm|PF13411.6 evalue:1.7e-22 score:78.5 best_domain_score:78.0 name:MerR_1;
8014 8090 tRNA
ID metaerg.pl|00935
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
name tRNA_Pro_ggg;
8226 9197 CDS
ID metaerg.pl|00936
allec_ids 3.5.4.16;
allgo_ids GO:0003933; GO:0003934; GO:0035998;
allko_ids K09007;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727029.1 1 321 evalue:4.9e-148 qcov:99.40 identity:78.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-5664; PWY-6147; ALL-CHORISMATE-PWY; PWY-5663; FOLSYN-PWY;
metacyc_pathway_name erythro-tetrahydrobiopterin biosynthesis II;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; superpathway of chorismate metabolism;; erythro-tetrahydrobiopterin biosynthesis I;; superpathway of tetrahydrofolate biosynthesis and salvage;;
metacyc_pathway_type Tetrahydrobiopterin-Biosynthesis;; 6-HM-Dihydropterin-PP-Biosynthesis;; Super-Pathways;; Tetrahydrobiopterin-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;;
pfam_acc PF02649;
pfam_desc Type I GTP cyclohydrolase folE2;
pfam_id GCHY-1;
pfam_target db:Pfam-A.hmm|PF02649.14 evalue:7.9e-75 score:250.9 best_domain_score:250.8 name:GCHY-1;
sprot_desc GTP cyclohydrolase FolE2;
sprot_id sp|Q5R041|GCH4_IDILO;
sprot_target db:uniprot_sprot|sp|Q5R041|GCH4_IDILO 10 311 evalue:1.7e-94 qcov:93.50 identity:55.60;
10057 9194 CDS
ID metaerg.pl|00937
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725624.1 12 282 evalue:2.9e-43 qcov:94.40 identity:40.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
sp YES;
9194 9241 lipoprotein_signal_peptide
ID metaerg.pl|00938
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
10863 10054 CDS
ID metaerg.pl|00939
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727028.1 1 263 evalue:2.6e-102 qcov:97.80 identity:68.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:9.2e-26 score:89.1 best_domain_score:88.1 name:Peptidase_M23;
sp YES;
10054 10107 signal_peptide
ID metaerg.pl|00940
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
12511 10856 CDS
ID metaerg.pl|00941
allec_ids 4.2.2.n1;
allgo_ids GO:0005886; GO:0016829; GO:0008933; GO:0071555; GO:0000270;
allko_ids K04565; K01183; K01081; K01537; K01185; K09693; K01446; K02020; K01448; K08307; K01447; K01119; K01449;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725623.1 24 549 evalue:4.4e-213 qcov:95.50 identity:68.90;
kegg_pathway_id 02010; 05014; 00760; 00550; 00240; 00530; 00230;
kegg_pathway_name ABC transporters - General; Amyotrophic lateral sclerosis (ALS); Nicotinate and nicotinamide metabolism; Peptidoglycan biosynthesis; Pyrimidine metabolism; Aminosugars metabolism; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01476; PF04225; PF01464;
pfam_desc LysM domain; Opacity-associated protein A LysM-like domain; Transglycosylase SLT domain;
pfam_id LysM; OapA; SLT;
pfam_target db:Pfam-A.hmm|PF01476.20 evalue:1.7e-42 score:142.4 best_domain_score:55.4 name:LysM; db:Pfam-A.hmm|PF04225.12 evalue:2.8e-05 score:23.4 best_domain_score:8.4 name:OapA; db:Pfam-A.hmm|PF01464.20 evalue:1.8e-21 score:75.2 best_domain_score:74.3 name:SLT;
sp YES;
sprot_desc Membrane-bound lytic murein transglycosylase D;
sprot_id sp|P0AEZ8|MLTD_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AEZ8|MLTD_ECOL6 92 545 evalue:5.1e-67 qcov:82.40 identity:35.20;
10856 10969 lipoprotein_signal_peptide
ID metaerg.pl|00942
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
12602 14743 CDS
ID metaerg.pl|00943
allec_ids 3.1.13.1;
allgo_ids GO:0003723; GO:0004540; GO:0005737; GO:0008859;
allko_ids K12573;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725622.1 1 707 evalue:0.0e+00 qcov:99.20 identity:76.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY0-1479;
metacyc_pathway_name tRNA processing;;
metacyc_pathway_type Nucleic-Acid-Processing;;
pfam_acc PF17876; PF08206; PF00773; PF00575;
pfam_desc Cold shock domain; Ribonuclease B OB domain; RNB domain; S1 RNA binding domain;
pfam_id CSD2; OB_RNB; RNB; S1;
pfam_target db:Pfam-A.hmm|PF17876.1 evalue:6e-23 score:80.0 best_domain_score:71.6 name:CSD2; db:Pfam-A.hmm|PF08206.11 evalue:4e-25 score:86.5 best_domain_score:73.7 name:OB_RNB; db:Pfam-A.hmm|PF00773.19 evalue:1.6e-100 score:335.9 best_domain_score:335.1 name:RNB; db:Pfam-A.hmm|PF00575.23 evalue:3.5e-12 score:45.7 best_domain_score:43.3 name:S1;
sprot_desc Ribonuclease R;
sprot_id sp|P40611|RNR_VIBPA;
sprot_target db:uniprot_sprot|sp|P40611|RNR_VIBPA 14 706 evalue:4.3e-175 qcov:97.20 identity:44.90;
tigrfam_acc TIGR00358; TIGR02063;
tigrfam_desc VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R;
tigrfam_mainrole Transcription; Transcription;
tigrfam_name 3_prime_RNase; RNase_R;
tigrfam_sub1role Degradation of RNA; Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00358 evalue:5e-202 score:671.9 best_domain_score:671.6 name:TIGR00358; db:TIGRFAMs.hmm|TIGR02063 evalue:2.7e-235 score:782.1 best_domain_score:781.8 name:TIGR02063;
14733 15473 CDS
ID metaerg.pl|00944
allec_ids 2.1.1.185;
allgo_ids GO:0003723; GO:0006396; GO:0008173; GO:0005737; GO:0070039;
allko_ids K03218; K00599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725621.1 1 243 evalue:1.1e-83 qcov:98.80 identity:68.00;
kegg_pathway_id 00450; 00626; 00350; 00340; 00380; 00150;
kegg_pathway_name Selenoamino acid metabolism; Naphthalene and anthracene degradation; Tyrosine metabolism; Histidine metabolism; Tryptophan metabolism; Androgen and estrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00588; PF08032;
pfam_desc SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding;
pfam_id SpoU_methylase; SpoU_sub_bind;
pfam_target db:Pfam-A.hmm|PF00588.19 evalue:8.3e-38 score:129.0 best_domain_score:128.5 name:SpoU_methylase; db:Pfam-A.hmm|PF08032.12 evalue:2.4e-15 score:55.8 best_domain_score:54.9 name:SpoU_sub_bind;
sprot_desc 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB;
sprot_id sp|Q88DE7|RLMB_PSEPK;
sprot_target db:uniprot_sprot|sp|Q88DE7|RLMB_PSEPK 4 245 evalue:3.2e-61 qcov:98.40 identity:53.10;
tigrfam_acc TIGR00186;
tigrfam_desc RNA methyltransferase, TrmH family, group 3;
tigrfam_mainrole Protein synthesis;
tigrfam_name rRNA_methyl_3;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00186 evalue:7.3e-68 score:227.8 best_domain_score:227.6 name:TIGR00186;
15470 16042 CDS
ID metaerg.pl|00945
allgo_ids GO:0002100; GO:0008251;
allko_ids K01489;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725620.1 5 188 evalue:3.2e-70 qcov:96.80 identity:74.50;
kegg_pathway_id 00240; 00983;
kegg_pathway_name Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00383; PF14437;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase;
pfam_id dCMP_cyt_deam_1; MafB19-deam;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:2.9e-14 score:52.0 best_domain_score:51.6 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:1.2e-10 score:40.5 best_domain_score:40.2 name:MafB19-deam;
16515 16138 CDS
ID metaerg.pl|00946
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_C;s__Halomonas_C muralis;
genomedb_acc GCF_900102945.1;
genomedb_target db:genomedb|GCF_900102945.1|WP_089726649.1 8 123 evalue:1.7e-16 qcov:92.80 identity:46.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF13767;
pfam_desc Domain of unknown function (DUF4168);
pfam_id DUF4168;
pfam_target db:Pfam-A.hmm|PF13767.6 evalue:8.5e-20 score:71.0 best_domain_score:70.4 name:DUF4168;
sp YES;
tm_num 1;
16138 16209 signal_peptide
ID metaerg.pl|00947
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
16515 16138 transmembrane_helix
ID metaerg.pl|00948
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology o16150-16209i;
16680 18122 CDS
ID metaerg.pl|00949
allgo_ids GO:0000155; GO:0007165;
allko_ids K12767; K02486; K11383; K07769; K11520; K14509; K04757; K11629; K10125; K11357; K07647; K13040; K10942; K07675; K07717; K01769; K07650; K06379; K07676; K10681; K07709; K13532; K07644; K02482; K08801; K02480; K07653; K07638; K07636; K11527; K02030; K13587; K10715; K07678; K02668; K03388; K08479; K07674; K10916; K02489; K07697; K07716; K07710; K07640; K07656; K01768; K07677; K07708; K07645; K07704; K10909; K08282; K11231; K07643; K02491; K11711; K07642; K02484; K11356; K11640; K07778; K11354; K11633; K07768; K07711; K08884; K13533; K11328; K07679; K02478; K07648; K07651; K07718; K07698; K07654; K07649; K00936; K07682; K07777; K03407; K07637; K13598; K07641; K07646; K07639; K08475; K07673; K07652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Halorhodospiraceae;g__Alkalilimnicola;s__Alkalilimnicola ehrlichii;
genomedb_acc GCF_000014785.1;
genomedb_target db:genomedb|GCF_000014785.1|WP_011629120.1 2 473 evalue:3.8e-88 qcov:98.30 identity:42.30;
kegg_pathway_id 05111; 00230; 00790; 04011; 02020; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Folate biosynthesis; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF02518; PF13581; PF13589; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-like ATPase domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HATPase_c_2; HATPase_c_3; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.4e-20 score:73.1 best_domain_score:72.3 name:HATPase_c; db:Pfam-A.hmm|PF13581.6 evalue:1.5e-07 score:30.7 best_domain_score:29.7 name:HATPase_c_2; db:Pfam-A.hmm|PF13589.6 evalue:1.4e-08 score:33.9 best_domain_score:33.1 name:HATPase_c_3; db:Pfam-A.hmm|PF00512.25 evalue:1.6e-09 score:36.9 best_domain_score:36.9 name:HisKA;
tm_num 2;
16680 18122 transmembrane_helix
ID metaerg.pl|00950
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology o16695-16763i17181-17249o;
18119 19501 CDS
ID metaerg.pl|00951
allgo_ids GO:0005524; GO:0005737; GO:0003700; GO:0008073; GO:0043565; GO:0008134; GO:0000160; GO:0045893; GO:0010967;
allko_ids K00760; K02484; K11640; K11356; K11711; K07642; K11231; K02491; K07677; K07708; K01937; K08282; K07704; K08475; K07639; K01120; K07673; K07641; K07646; K07652; K07682; K07654; K07637; K03407; K07648; K07679; K02478; K07718; K07651; K02575; K07768; K07778; K11354; K07711; K07709; K07644; K06379; K10681; K07676; K07650; K07647; K07675; K07769; K12767; K13761; K02486; K11383; K10125; K11357; K04757; K07716; K02489; K01768; K07710; K03388; K02668; K10916; K08479; K11527; K10715; K07678; K02480; K02482; K07636; K07653; K07714;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A;s__Pseudomonas_A stutzeri_L;
genomedb_acc GCA_002362915.1;
genomedb_target db:genomedb|GCA_002362915.1|DEVN01000077.1_22 6 460 evalue:4.4e-150 qcov:98.90 identity:61.10;
kegg_pathway_id 00790; 04011; 02020; 03090; 05111; 00230; 00240; 00983;
kegg_pathway_name Folate biosynthesis; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00004; PF07728; PF02954; PF01078; PF00072; PF00158; PF14532;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); Bacterial regulatory protein, Fis family; Magnesium chelatase, subunit ChlI; Response regulator receiver domain; Sigma-54 interaction domain; Sigma-54 interaction domain;
pfam_id AAA; AAA_5; HTH_8; Mg_chelatase; Response_reg; Sigma54_activat; Sigma54_activ_2;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:3.1e-06 score:26.9 best_domain_score:25.4 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:3.8e-06 score:26.2 best_domain_score:24.7 name:AAA_5; db:Pfam-A.hmm|PF02954.19 evalue:4.9e-08 score:31.9 best_domain_score:30.7 name:HTH_8; db:Pfam-A.hmm|PF01078.21 evalue:1e-05 score:24.3 best_domain_score:17.6 name:Mg_chelatase; db:Pfam-A.hmm|PF00072.24 evalue:3.7e-27 score:93.9 best_domain_score:93.1 name:Response_reg; db:Pfam-A.hmm|PF00158.26 evalue:1.9e-65 score:218.9 best_domain_score:218.4 name:Sigma54_activat; db:Pfam-A.hmm|PF14532.6 evalue:8.3e-25 score:86.8 best_domain_score:83.9 name:Sigma54_activ_2;
sprot_desc Regulatory protein AtoC;
sprot_id sp|Q06065|ATOC_ECOLI;
sprot_target db:uniprot_sprot|sp|Q06065|ATOC_ECOLI 7 460 evalue:5.5e-91 qcov:98.70 identity:41.00;
19617 20291 CDS
ID metaerg.pl|00952
allgo_ids GO:0019867;
allko_ids K02040;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38345.1 17 223 evalue:1.2e-81 qcov:92.40 identity:74.40;
kegg_pathway_id 02020; 02010;
kegg_pathway_name Two-component system - General; ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF13488; PF13436; PF13441; PF00691; PF05433;
pfam_desc Glycine zipper; Glycine-zipper domain; YMGG-like Gly-zipper; OmpA family; Glycine zipper 2TM domain;
pfam_id Gly-zipper_Omp; Gly-zipper_OmpA; Gly-zipper_YMGG; OmpA; Rick_17kDa_Anti;
pfam_target db:Pfam-A.hmm|PF13488.6 evalue:1.2e-12 score:46.8 best_domain_score:45.9 name:Gly-zipper_Omp; db:Pfam-A.hmm|PF13436.6 evalue:2.7e-08 score:32.7 best_domain_score:21.4 name:Gly-zipper_OmpA; db:Pfam-A.hmm|PF13441.6 evalue:2.1e-11 score:42.6 best_domain_score:41.8 name:Gly-zipper_YMGG; db:Pfam-A.hmm|PF00691.20 evalue:2.3e-20 score:72.0 best_domain_score:71.5 name:OmpA; db:Pfam-A.hmm|PF05433.15 evalue:9.4e-06 score:24.6 best_domain_score:23.5 name:Rick_17kDa_Anti;
sp YES;
tm_num 2;
19617 19685 lipoprotein_signal_peptide
ID metaerg.pl|00953
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
19617 20291 transmembrane_helix
ID metaerg.pl|00954
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i19635-19694o19737-19796i;
21134 20307 CDS
ID metaerg.pl|00955
allec_ids 5.4.99.22; 5.4.99.-;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0005829; GO:0120159; GO:0000455;
allko_ids K06178;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169572.1 1 249 evalue:2.3e-101 qcov:90.50 identity:73.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-5672; PWY-6008; PWY-5203; PWY-6109; PWY-5992; PWY-5377; PWY-6005; PWY-112; RIBOKIN-PWY; PWY-6115;
metacyc_pathway_name ginsenosides biosynthesis;; baruol biosynthesis;; soybean saponin I biosynthesis;; mangrove triterpenoid biosynthesis;; thalianol and derivatives biosynthesis;; α-amyrin biosynthesis;; marneral biosynthesis;; lupeol biosynthesis;; ribose phosphorylation;; ;
metacyc_pathway_type TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; Sugars-And-Polysaccharides-Degradation;; ;
pfam_acc PF00849; PF01479;
pfam_desc RNA pseudouridylate synthase; S4 domain;
pfam_id PseudoU_synth_2; S4;
pfam_target db:Pfam-A.hmm|PF00849.22 evalue:8.8e-15 score:54.4 best_domain_score:50.8 name:PseudoU_synth_2; db:Pfam-A.hmm|PF01479.25 evalue:2.1e-07 score:29.8 best_domain_score:27.9 name:S4;
sprot_desc Ribosomal large subunit pseudouridine synthase B;
sprot_id sp|Q9HZ55|RLUB_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HZ55|RLUB_PSEAE 1 274 evalue:2.4e-73 qcov:99.60 identity:53.60;
tigrfam_acc TIGR00093;
tigrfam_desc pseudouridine synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00093;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00093 evalue:7.3e-51 score:171.3 best_domain_score:170.7 name:TIGR00093;
22020 21160 CDS
ID metaerg.pl|00956
allgo_ids GO:0051304;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169571.1 1 276 evalue:9.2e-90 qcov:96.50 identity:67.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF04079;
pfam_desc Segregation and condensation complex subunit ScpB;
pfam_id SMC_ScpB;
pfam_target db:Pfam-A.hmm|PF04079.16 evalue:1.1e-49 score:167.3 best_domain_score:167.0 name:SMC_ScpB;
tigrfam_acc TIGR00281;
tigrfam_desc segregation and condensation protein B;
tigrfam_mainrole DNA metabolism;
tigrfam_name TIGR00281;
tigrfam_sub1role Chromosome-associated proteins;
tigrfam_target db:TIGRFAMs.hmm|TIGR00281 evalue:6.1e-35 score:119.7 best_domain_score:119.1 name:TIGR00281;
22868 22053 CDS
ID metaerg.pl|00957
allgo_ids GO:0005737; GO:0007049; GO:0051301; GO:0007059;
allko_ids K05896;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169888.1 14 270 evalue:9.0e-119 qcov:94.80 identity:87.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF02616;
pfam_desc Segregation and condensation protein ScpA;
pfam_id SMC_ScpA;
pfam_target db:Pfam-A.hmm|PF02616.14 evalue:2.8e-29 score:102.0 best_domain_score:101.1 name:SMC_ScpA;
sprot_desc Segregation and condensation protein A;
sprot_id sp|Q9PAP4|SCPA_XYLFA;
sprot_target db:uniprot_sprot|sp|Q9PAP4|SCPA_XYLFA 11 268 evalue:1.6e-82 qcov:95.20 identity:61.40;
22995 23513 CDS
ID metaerg.pl|00958
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF03795;
pfam_desc YCII-related domain;
pfam_id YCII;
pfam_target db:Pfam-A.hmm|PF03795.14 evalue:2.8e-23 score:81.4 best_domain_score:81.0 name:YCII;
23510 23782 CDS
ID metaerg.pl|00959
allgo_ids GO:0009507; GO:0051537; GO:0046872;
allko_ids K22066;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727027.1 8 90 evalue:3.7e-29 qcov:92.20 identity:77.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01722;
pfam_desc BolA-like protein;
pfam_id BolA;
pfam_target db:Pfam-A.hmm|PF01722.18 evalue:3.1e-25 score:87.5 best_domain_score:87.3 name:BolA;
sprot_desc hypothetical protein;
sprot_id sp|Q682I1|BOLA1_ARATH;
sprot_target db:uniprot_sprot|sp|Q682I1|BOLA1_ARATH 3 89 evalue:5.1e-09 qcov:96.70 identity:34.40;
23772 24596 CDS
ID metaerg.pl|00960
allgo_ids GO:0003755;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169570.1 1 270 evalue:2.7e-78 qcov:98.50 identity:55.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF13145;
pfam_desc PPIC-type PPIASE domain;
pfam_id Rotamase_2;
pfam_target db:Pfam-A.hmm|PF13145.6 evalue:2.3e-10 score:40.6 best_domain_score:40.0 name:Rotamase_2;
sp YES;
23772 23819 lipoprotein_signal_peptide
ID metaerg.pl|00961
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
25010 24621 CDS
ID metaerg.pl|00962
allec_ids 1.7.1.13;
allgo_ids GO:0008616; GO:0033739; GO:0005737; GO:0046857;
allko_ids K09457;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Thiodiazotropha;s__Thiodiazotropha endoloripes_C;
genomedb_acc GCF_001708965.1;
genomedb_target db:genomedb|GCF_001708965.1|WP_069005700.1 1 129 evalue:2.5e-58 qcov:100.00 identity:81.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF14489;
pfam_desc QueF-like protein;
pfam_id QueF;
pfam_target db:Pfam-A.hmm|PF14489.6 evalue:9.1e-31 score:105.1 best_domain_score:104.8 name:QueF;
sprot_desc NADPH-dependent 7-cyano-7-deazaguanine reductase;
sprot_id sp|B8GTL3|QUEF_THISH;
sprot_target db:uniprot_sprot|sp|B8GTL3|QUEF_THISH 1 129 evalue:8.9e-55 qcov:100.00 identity:76.00;
tigrfam_acc TIGR03139;
tigrfam_desc 7-cyano-7-deazaguanine reductase;
tigrfam_name QueF-II;
tigrfam_target db:TIGRFAMs.hmm|TIGR03139 evalue:4e-49 score:164.4 best_domain_score:164.1 name:TIGR03139;
25081 28566 CDS
ID metaerg.pl|00963
allgo_ids GO:0005524; GO:0005694; GO:0005737; GO:0003677; GO:0030261; GO:0006260; GO:0007062;
allko_ids K03529;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725614.1 1 1161 evalue:0.0e+00 qcov:100.00 identity:77.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF13175; PF13304; PF02463;
pfam_desc AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system; RecF/RecN/SMC N terminal domain;
pfam_id AAA_15; AAA_21; SMC_N;
pfam_target db:Pfam-A.hmm|PF13175.6 evalue:2.2e-15 score:56.5 best_domain_score:41.0 name:AAA_15; db:Pfam-A.hmm|PF13304.6 evalue:3.4e-15 score:55.9 best_domain_score:27.4 name:AAA_21; db:Pfam-A.hmm|PF02463.19 evalue:1e-67 score:227.1 best_domain_score:226.0 name:SMC_N;
sprot_desc Chromosome partition protein Smc;
sprot_id sp|Q5H054|SMC_XANOR;
sprot_target db:uniprot_sprot|sp|Q5H054|SMC_XANOR 1 1161 evalue:1.2e-174 qcov:100.00 identity:48.50;
tigrfam_acc TIGR02168;
tigrfam_desc chromosome segregation protein SMC;
tigrfam_mainrole DNA metabolism;
tigrfam_name SMC_prok_B;
tigrfam_sub1role Chromosome-associated proteins;
tigrfam_target db:TIGRFAMs.hmm|TIGR02168 evalue:0 score:1052.5 best_domain_score:1052.2 name:TIGR02168;
28617 29381 CDS
ID metaerg.pl|00964
allgo_ids GO:0090529; GO:0032153; GO:0005887; GO:0043093;
allko_ids K03528;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169569.1 1 252 evalue:5.0e-79 qcov:99.20 identity:62.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF04354;
pfam_desc ZipA, C-terminal FtsZ-binding domain;
pfam_id ZipA_C;
pfam_target db:Pfam-A.hmm|PF04354.13 evalue:1.1e-39 score:134.5 best_domain_score:134.1 name:ZipA_C;
sp YES;
sprot_desc Cell division protein ZipA;
sprot_id sp|Q4UTA8|ZIPA_XANC8;
sprot_target db:uniprot_sprot|sp|Q4UTA8|ZIPA_XANC8 1 248 evalue:6.9e-35 qcov:97.60 identity:40.60;
tigrfam_acc TIGR02205;
tigrfam_desc cell division protein ZipA;
tigrfam_mainrole Cellular processes;
tigrfam_name septum_zipA;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR02205 evalue:3.3e-48 score:164.3 best_domain_score:158.8 name:TIGR02205;
tm_num 1;
28617 28703 signal_peptide
ID metaerg.pl|00965
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
28617 29381 transmembrane_helix
ID metaerg.pl|00966
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology o28629-28697i;
29388 31403 CDS
ID metaerg.pl|00967
allec_ids 6.5.1.2;
allgo_ids GO:0003911; GO:0003677; GO:0046872; GO:0006281; GO:0006260;
allko_ids K01972;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725612.1 10 669 evalue:7.0e-282 qcov:98.40 identity:76.40;
kegg_pathway_id 03410; 03030; 03420; 03430;
kegg_pathway_name Base excision repair; DNA replication; Nucleotide excision repair; Mismatch repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00533; PF01653; PF03120; PF03119; PF00633; PF12826; PF14520; PF12738;
pfam_desc BRCA1 C Terminus (BRCT) domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase C4 zinc finger domain; Helix-hairpin-helix motif; Helix-hairpin-helix motif; Helix-hairpin-helix domain; twin BRCT domain;
pfam_id BRCT; DNA_ligase_aden; DNA_ligase_OB; DNA_ligase_ZBD; HHH; HHH_2; HHH_5; PTCB-BRCT;
pfam_target db:Pfam-A.hmm|PF00533.26 evalue:1.6e-12 score:46.9 best_domain_score:45.7 name:BRCT; db:Pfam-A.hmm|PF01653.18 evalue:4.2e-125 score:416.3 best_domain_score:415.8 name:DNA_ligase_aden; db:Pfam-A.hmm|PF03120.16 evalue:1.3e-35 score:120.3 best_domain_score:119.3 name:DNA_ligase_OB; db:Pfam-A.hmm|PF03119.16 evalue:7.9e-12 score:44.2 best_domain_score:42.9 name:DNA_ligase_ZBD; db:Pfam-A.hmm|PF00633.23 evalue:5e-07 score:28.5 best_domain_score:26.5 name:HHH; db:Pfam-A.hmm|PF12826.7 evalue:5.8e-26 score:89.6 best_domain_score:84.3 name:HHH_2; db:Pfam-A.hmm|PF14520.6 evalue:1.7e-15 score:56.6 best_domain_score:28.2 name:HHH_5; db:Pfam-A.hmm|PF12738.7 evalue:5.5e-06 score:25.5 best_domain_score:24.2 name:PTCB-BRCT;
sprot_desc DNA ligase;
sprot_id sp|Q604U8|DNLJ_METCA;
sprot_target db:uniprot_sprot|sp|Q604U8|DNLJ_METCA 1 669 evalue:1.2e-230 qcov:99.70 identity:61.50;
tigrfam_acc TIGR00575;
tigrfam_desc DNA ligase, NAD-dependent;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnlj;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00575 evalue:6.9e-252 score:836.7 best_domain_score:836.5 name:TIGR00575;
31513 31953 CDS
ID metaerg.pl|00968
allgo_ids GO:0005737; GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725611.1 1 146 evalue:5.3e-57 qcov:100.00 identity:82.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.2e-28 score:99.6 best_domain_score:99.5 name:Usp;
sprot_desc Universal stress protein MJ0577;
sprot_id sp|Q57997|Y577_METJA;
sprot_target db:uniprot_sprot|sp|Q57997|Y577_METJA 1 145 evalue:1.3e-06 qcov:99.30 identity:25.30;
32182 32106 tRNA
ID metaerg.pl|00969
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
name tRNA_Asn_gtt;
32936 32319 CDS
ID metaerg.pl|00970
allec_ids 3.6.1.1;
allgo_ids GO:0000287; GO:0004427; GO:0005737; GO:0006796;
allko_ids K01507;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727037.1 1 204 evalue:2.1e-99 qcov:99.50 identity:85.30;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00719;
pfam_desc Inorganic pyrophosphatase;
pfam_id Pyrophosphatase;
pfam_target db:Pfam-A.hmm|PF00719.19 evalue:1.9e-46 score:157.0 best_domain_score:156.9 name:Pyrophosphatase;
sprot_desc Inorganic pyrophosphatase;
sprot_id sp|Q9PLF1|IPYR_CHLMU;
sprot_target db:uniprot_sprot|sp|Q9PLF1|IPYR_CHLMU 13 203 evalue:7.5e-48 qcov:93.20 identity:46.70;
34379 33006 CDS
ID metaerg.pl|00971
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF13163;
pfam_desc Protein of unknown function (DUF3999);
pfam_id DUF3999;
pfam_target db:Pfam-A.hmm|PF13163.6 evalue:1.3e-36 score:125.9 best_domain_score:124.8 name:DUF3999;
sp YES;
tm_num 2;
33006 33074 signal_peptide
ID metaerg.pl|00972
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
34379 33006 transmembrane_helix
ID metaerg.pl|00973
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i33018-33077o34296-34364i;
37045 34376 CDS
ID metaerg.pl|00974
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter sp001429785;
genomedb_acc GCF_001429785.1;
genomedb_target db:genomedb|GCF_001429785.1|WP_057163850.1 40 879 evalue:2.3e-147 qcov:94.50 identity:42.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF10101;
pfam_desc Predicted membrane protein (DUF2339);
pfam_id DUF2339;
pfam_target db:Pfam-A.hmm|PF10101.9 evalue:3.9e-116 score:388.5 best_domain_score:388.3 name:DUF2339;
tm_num 28;
37045 34376 transmembrane_helix
ID metaerg.pl|00975
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i34379-34435o34463-34516i34802-34870o34913-34966i34985-35053o35066-35134i35147-35206o35219-35287i35306-35359o35372-35440i35459-35518o35531-35590i35627-35680o35693-35746i35765-35833o35861-35920i35939-36007o36035-36088i36107-36160o36188-36244i36281-36349o36377-36436i36473-36535o36563-36631i36668-36721o36779-36838i36857-36916o36929-36997i;
37225 38145 CDS
ID metaerg.pl|00976
allgo_ids GO:0008146;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__PHEG01;s__PHEG01 sp002842835;
genomedb_acc GCA_002842835.1;
genomedb_target db:genomedb|GCA_002842835.1|PKP84341.1 6 298 evalue:2.9e-65 qcov:95.80 identity:48.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00685; PF13469;
pfam_desc Sulfotransferase domain; Sulfotransferase family;
pfam_id Sulfotransfer_1; Sulfotransfer_3;
pfam_target db:Pfam-A.hmm|PF00685.27 evalue:2.1e-26 score:92.2 best_domain_score:88.3 name:Sulfotransfer_1; db:Pfam-A.hmm|PF13469.6 evalue:5.3e-08 score:32.7 best_domain_score:27.6 name:Sulfotransfer_3;
38152 39507 CDS
ID metaerg.pl|00977
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas halophila;
genomedb_acc GCF_900107165.1;
genomedb_target db:genomedb|GCF_900107165.1|WP_090414245.1 1 449 evalue:3.3e-142 qcov:99.60 identity:57.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
tigrfam_acc TIGR04396;
tigrfam_desc surface carbohydrate biosynthesis protein;
tigrfam_mainrole Cell envelope;
tigrfam_name surf_polysacc;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR04396 evalue:1.3e-88 score:296.5 best_domain_score:296.2 name:TIGR04396;
39598 40662 CDS
ID metaerg.pl|00978
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas halophila;
genomedb_acc GCF_900107165.1;
genomedb_target db:genomedb|GCF_900107165.1|WP_090411304.1 3 353 evalue:2.7e-115 qcov:99.20 identity:56.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF02737; PF03807; PF01408; PF02254;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; NADP oxidoreductase coenzyme F420-dependent; Oxidoreductase family, NAD-binding Rossmann fold; TrkA-N domain;
pfam_id 3HCDH_N; F420_oxidored; GFO_IDH_MocA; TrkA_N;
pfam_target db:Pfam-A.hmm|PF02737.18 evalue:1.4e-05 score:24.3 best_domain_score:23.3 name:3HCDH_N; db:Pfam-A.hmm|PF03807.17 evalue:2.9e-06 score:27.0 best_domain_score:25.9 name:F420_oxidored; db:Pfam-A.hmm|PF01408.22 evalue:9.7e-13 score:48.2 best_domain_score:45.7 name:GFO_IDH_MocA; db:Pfam-A.hmm|PF02254.18 evalue:1.8e-07 score:30.7 best_domain_score:23.3 name:TrkA_N;
40670 41743 CDS
ID metaerg.pl|00979
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas halophila;
genomedb_acc GCF_900107165.1;
genomedb_target db:genomedb|GCF_900107165.1|WP_090411302.1 1 350 evalue:5.0e-109 qcov:98.00 identity:55.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF02348;
pfam_desc Cytidylyltransferase;
pfam_id CTP_transf_3;
pfam_target db:Pfam-A.hmm|PF02348.19 evalue:3.6e-22 score:78.6 best_domain_score:78.1 name:CTP_transf_3;
41807 43303 CDS
ID metaerg.pl|00980
allgo_ids GO:0016051;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas halophila;
genomedb_acc GCF_900107165.1;
genomedb_target db:genomedb|GCF_900107165.1|WP_090411300.1 1 498 evalue:2.0e-193 qcov:100.00 identity:64.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF07883; PF03102;
pfam_desc Cupin domain; NeuB family;
pfam_id Cupin_2; NeuB;
pfam_target db:Pfam-A.hmm|PF07883.11 evalue:5.7e-09 score:34.8 best_domain_score:33.9 name:Cupin_2; db:Pfam-A.hmm|PF03102.14 evalue:1.1e-44 score:151.9 best_domain_score:151.3 name:NeuB;
44611 43427 CDS
ID metaerg.pl|00981
allec_ids 2.3.1.47;
allgo_ids GO:0009058; GO:0030170; GO:0008710; GO:0009102;
allko_ids K00652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725677.1 1 390 evalue:2.6e-175 qcov:99.00 identity:80.00;
kegg_pathway_id 00780;
kegg_pathway_name Biotin metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id BIOTIN-BIOSYNTHESIS-PWY; PWY-5005; PWY-6519; PWY-6578;
metacyc_pathway_name biotin biosynthesis I;; biotin biosynthesis II;; 8-amino-7-oxononanoate biosynthesis I;; 8-amino-7-oxononanoate biosynthesis III;;
metacyc_pathway_type BIOTIN-SYN; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; 7-Keto-8-aminopelargonate-Biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:5.4e-50 score:169.8 best_domain_score:169.6 name:Aminotran_1_2;
sprot_desc 8-amino-7-oxononanoate synthase;
sprot_id sp|B3PI88|BIOF_CELJU;
sprot_target db:uniprot_sprot|sp|B3PI88|BIOF_CELJU 39 393 evalue:5.1e-61 qcov:90.10 identity:39.90;
44865 44611 CDS
ID metaerg.pl|00982
allko_ids K01897;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL39562.1 1 76 evalue:5.8e-16 qcov:90.50 identity:67.10;
kegg_pathway_id 00071;
kegg_pathway_name Fatty acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00550;
pfam_desc Phosphopantetheine attachment site;
pfam_id PP-binding;
pfam_target db:Pfam-A.hmm|PF00550.25 evalue:3.4e-12 score:45.8 best_domain_score:45.5 name:PP-binding;
45836 44862 CDS
ID metaerg.pl|00983
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114;
allko_ids K00329; K00143; K03953; K00356; K01897;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725675.1 20 320 evalue:6.6e-84 qcov:92.90 identity:55.00;
kegg_pathway_id 00310; 00300; 00190; 05012; 00071; 00130;
kegg_pathway_name Lysine degradation; Lysine biosynthesis; Oxidative phosphorylation; Parkinson's disease; Fatty acid metabolism; Ubiquinone biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01073; PF01370; PF16363; PF13460; PF07993; PF05368; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; NAD(P)H-binding ; Male sterility protein; NmrA-like family; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; NAD_binding_10; NAD_binding_4; NmrA; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:4.2e-12 score:44.9 best_domain_score:33.8 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:1.4e-24 score:86.1 best_domain_score:84.0 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:7.5e-10 score:37.9 best_domain_score:35.9 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF13460.6 evalue:2.4e-23 score:82.2 best_domain_score:81.8 name:NAD_binding_10; db:Pfam-A.hmm|PF07993.12 evalue:2.3e-16 score:59.0 best_domain_score:27.5 name:NAD_binding_4; db:Pfam-A.hmm|PF05368.13 evalue:1.1e-06 score:27.6 best_domain_score:27.3 name:NmrA; db:Pfam-A.hmm|PF04321.17 evalue:1.1e-08 score:33.7 best_domain_score:27.8 name:RmlD_sub_bind;
sp YES;
tm_num 1;
44862 44999 signal_peptide
ID metaerg.pl|00984
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
45836 44862 transmembrane_helix
ID metaerg.pl|00985
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology o44919-44978i;
47610 45817 CDS
ID metaerg.pl|00986
allec_ids 2.3.1.-;
allgo_ids GO:0003824; GO:0016874; GO:0031177; GO:0030170; GO:0008483; GO:0017000;
allko_ids K03367; K00143; K01776; K01779; K02364; K00992; K05939; K01586; K01904; K01909; K01897; K01652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725674.1 1 596 evalue:6.3e-282 qcov:99.80 identity:81.50;
kegg_pathway_id 00660; 00471; 00650; 00071; 00300; 00473; 00252; 00251; 00940; 00770; 01053; 00310; 00564; 00290;
kegg_pathway_name C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Butanoate metabolism; Fatty acid metabolism; Lysine biosynthesis; D-Alanine metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Phenylpropanoid biosynthesis; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; Lysine degradation; Glycerophospholipid metabolism; Valine, leucine and isoleucine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-5405; PWY-5972; PWY-6318; PWY-5307; PWY-6412; PWY-5393; KDO-LIPASYN-PWY; PWY-5965; PWY-5209; PWY-5400; PWY-5313; PWY-6404; CENTBENZCOA-PWY; PWY-6316; PWY-5987; PWY-6411; PWY0-881; PWY-5268; PWY-5140; PWY-84; PWY-6438; THREOCAT-PWY; PWY-5284; P3-PWY; PWY-6515; PWY-6295; ECASYN-PWY; PWY-5080; PWY-5139; PWY-6310; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5184; BENZCOA-PWY; PWY-4801; KDO-NAGLIPASYN-PWY; PWY-6397; PWY1-3; PWY-6312; PWY-6418; PWY-6442; FASYN-INITIAL-PWY; PWYG-321; PWY-6413; PWY-6113; LPSSYN-PWY; PWY1A0-6325; PWY-6432; PWY-5437; PWY-5981; PWY-5477;
metacyc_pathway_name superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; L-phenylalanine degradation IV (mammalian, via side chain);; gentiodelphin biosynthesis;; ginsenoside degradation II;; raspberry ketone biosynthesis;; (Kdo)2-lipid A biosynthesis I;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; amaranthin biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; sorgoleone biosynthesis;; ginsenoside degradation I;; superpathway of fatty acid biosynthesis I (E. coli);; salvianin biosynthesis;; cannabinoid biosynthesis;; resveratrol biosynthesis;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; shisonin biosynthesis;; gallate degradation III (anaerobic);; phloridzin biosynthesis;; ; enterobacterial common antigen biosynthesis;; very long chain fatty acid biosynthesis I;; pelargonidin conjugates biosynthesis;; aloesone biosynthesis II;; sophorolipid biosynthesis;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; aloesone biosynthesis I;; superpathway of (Kdo)2-lipid A biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; barbaloin biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; ginsenoside degradation III;; superpathway of mycolate biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; actinorhodin biosynthesis;; curcuminoid biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; gallotannin biosynthesis;;
metacyc_pathway_type BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; Ginsenoside-Degradation;; POLYKETIDE-SYN;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis;; METHANOGENESIS;; BETALAIN-ALKALOIDS;; ANTHOCYANIN-SYN; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; QUINONE-SYN;; Ginsenoside-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; TERPENOPHENOLICS-SYN;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; ANTHOCYANIN-SYN;; GALLATE-DEG;; FLAVONOID-SYN;; ; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Lipid-Biosynthesis;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; POLYKETIDE-SYN;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Cell-Wall-Biosynthesis;; Storage-Compounds-Biosynthesis;; POLYKETIDE-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; TERPENOID-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; GALLOTANNINS;;
pfam_acc PF00501;
pfam_desc AMP-binding enzyme;
pfam_id AMP-binding;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:9.6e-73 score:244.4 best_domain_score:244.0 name:AMP-binding;
sprot_desc Mycosubtilin synthase subunit A;Glutamate-1-semialdehyde aminotransferase;ATP-dependent asparagine adenylase 1;
sprot_id sp|Q9R9J1|MYCA_BACIU;
sprot_target db:uniprot_sprot|sp|Q9R9J1|MYCA_BACIU 15 559 evalue:5.3e-62 qcov:91.30 identity:28.00;
47823 48983 CDS
ID metaerg.pl|00987
allgo_ids GO:0003677; GO:0006355; GO:0006351;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727036.1 26 381 evalue:4.8e-142 qcov:92.20 identity:68.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00583;
pfam_desc Acetyltransferase (GNAT) family;
pfam_id Acetyltransf_1;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:3e-05 score:23.4 best_domain_score:13.1 name:Acetyltransf_1;
sprot_desc hypothetical protein;
sprot_id sp|Q46840|YGHO_ECOLI;
sprot_target db:uniprot_sprot|sp|Q46840|YGHO_ECOLI 21 385 evalue:1.6e-88 qcov:94.60 identity:43.20;
48983 49780 CDS
ID metaerg.pl|00988
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725673.1 7 263 evalue:5.2e-71 qcov:97.00 identity:57.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF12804;
pfam_desc MobA-like NTP transferase domain;
pfam_id NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF12804.7 evalue:1e-13 score:51.2 best_domain_score:50.9 name:NTP_transf_3;
49774 50838 CDS
ID metaerg.pl|00989
allgo_ids GO:0016021; GO:0043190; GO:0055085;
allko_ids K07091;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725672.1 1 354 evalue:1.5e-121 qcov:100.00 identity:66.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF03739;
pfam_desc Lipopolysaccharide export system permease LptF/LptG;
pfam_id LptF_LptG;
pfam_target db:Pfam-A.hmm|PF03739.14 evalue:1e-51 score:175.1 best_domain_score:174.8 name:LptF_LptG;
sprot_desc Lipopolysaccharide export system permease protein LptF;
sprot_id sp|P0AFA0|LPTF_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFA0|LPTF_ECO57 2 307 evalue:5.7e-11 qcov:86.40 identity:23.80;
tigrfam_acc TIGR04407;
tigrfam_desc LPS export ABC transporter permease LptF;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name LptF_YjgP;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04407 evalue:8e-72 score:241.0 best_domain_score:240.8 name:TIGR04407;
tm_num 6;
49774 50838 transmembrane_helix
ID metaerg.pl|00990
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i49810-49878o49948-50007i50068-50136o50572-50625i50659-50715o50743-50811i;
50835 51905 CDS
ID metaerg.pl|00991
allgo_ids GO:0016021;
allko_ids K11720;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169588.1 7 356 evalue:1.3e-125 qcov:98.30 identity:66.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF03739;
pfam_desc Lipopolysaccharide export system permease LptF/LptG;
pfam_id LptF_LptG;
pfam_target db:Pfam-A.hmm|PF03739.14 evalue:7.2e-47 score:159.2 best_domain_score:159.0 name:LptF_LptG;
tigrfam_acc TIGR04408;
tigrfam_desc LPS export ABC transporter permease LptG;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name LptG_lptG;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04408 evalue:3.1e-75 score:252.2 best_domain_score:252.0 name:TIGR04408;
tm_num 6;
50835 51905 transmembrane_helix
ID metaerg.pl|00992
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i50853-50921o51012-51080i51114-51182o51657-51716i51735-51791o51819-51887i;
52314 51979 CDS
ID metaerg.pl|00993
allgo_ids GO:0009055; GO:0019646;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169584.1 1 111 evalue:2.3e-44 qcov:100.00 identity:73.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01355;
pfam_desc High potential iron-sulfur protein;
pfam_id HIPIP;
pfam_target db:Pfam-A.hmm|PF01355.17 evalue:5.1e-24 score:83.6 best_domain_score:83.2 name:HIPIP;
sp YES;
51979 52083 signal_peptide
ID metaerg.pl|00994
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
52383 53030 CDS
ID metaerg.pl|00995
allec_ids 1.14.11.33;
allgo_ids GO:0015630; GO:0005654; GO:0005634; GO:0103053; GO:0051747; GO:0043734; GO:0008198; GO:0006307; GO:0035511;
allko_ids K10859;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727035.1 22 210 evalue:1.2e-54 qcov:87.90 identity:58.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF13532;
pfam_desc 2OG-Fe(II) oxygenase superfamily;
pfam_id 2OG-FeII_Oxy_2;
pfam_target db:Pfam-A.hmm|PF13532.6 evalue:3.6e-32 score:111.4 best_domain_score:111.1 name:2OG-FeII_Oxy_2;
sprot_desc DNA oxidative demethylase ALKBH2;
sprot_id sp|Q58DM4|ALKB2_BOVIN;
sprot_target db:uniprot_sprot|sp|Q58DM4|ALKB2_BOVIN 39 210 evalue:4.8e-29 qcov:80.00 identity:40.70;
53262 53011 CDS
ID metaerg.pl|00996
allec_ids 3.1.11.6;
allgo_ids GO:0006308; GO:0008855; GO:0009318; GO:0005737;
allko_ids K03602;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725669.1 11 76 evalue:1.4e-14 qcov:79.50 identity:65.20;
kegg_pathway_id 03430;
kegg_pathway_name Mismatch repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF02609;
pfam_desc Exonuclease VII small subunit;
pfam_id Exonuc_VII_S;
pfam_target db:Pfam-A.hmm|PF02609.16 evalue:5.8e-19 score:67.1 best_domain_score:66.7 name:Exonuc_VII_S;
sprot_desc Exodeoxyribonuclease 7 small subunit;
sprot_id sp|A6V060|EX7S_PSEA7;
sprot_target db:uniprot_sprot|sp|A6V060|EX7S_PSEA7 1 77 evalue:2.3e-11 qcov:92.80 identity:49.40;
tigrfam_acc TIGR01280;
tigrfam_desc exodeoxyribonuclease VII, small subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name xseB;
tigrfam_sub1role Degradation of DNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR01280 evalue:5.3e-20 score:70.4 best_domain_score:69.9 name:TIGR01280;
54526 53267 CDS
ID metaerg.pl|00997
allec_ids 6.3.4.19; 6.3.4.-;
allgo_ids GO:0000166; GO:0005524; GO:0005737; GO:0008033; GO:0016879; GO:0006400;
allko_ids K00760; K04075;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725668.1 1 406 evalue:1.0e-92 qcov:96.90 identity:47.50;
kegg_pathway_id 00230; 00983;
kegg_pathway_name Purine metabolism; Drug metabolism - other enzymes;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01171; PF09179; PF11734;
pfam_desc PP-loop family; TilS substrate binding domain; TilS substrate C-terminal domain;
pfam_id ATP_bind_3; TilS; TilS_C;
pfam_target db:Pfam-A.hmm|PF01171.20 evalue:1.3e-49 score:167.7 best_domain_score:167.2 name:ATP_bind_3; db:Pfam-A.hmm|PF09179.11 evalue:8.3e-10 score:38.3 best_domain_score:38.3 name:TilS; db:Pfam-A.hmm|PF11734.8 evalue:1.8e-16 score:58.6 best_domain_score:56.9 name:TilS_C;
sprot_desc tRNA(Ile)-lysidine synthase;
sprot_id sp|Q0A7K1|TILS_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0A7K1|TILS_ALKEH 2 395 evalue:6.2e-57 qcov:94.00 identity:36.10;
tigrfam_acc TIGR02432; TIGR02433;
tigrfam_desc tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase, C-terminal domain;
tigrfam_mainrole Protein synthesis; Protein synthesis;
tigrfam_name lysidine_TilS_N; lysidine_TilS_C;
tigrfam_sub1role tRNA and rRNA base modification; tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR02432 evalue:4.3e-50 score:169.4 best_domain_score:169.0 name:TIGR02432; db:TIGRFAMs.hmm|TIGR02433 evalue:3.3e-08 score:32.0 best_domain_score:32.0 name:TIGR02433;
55545 54586 CDS
ID metaerg.pl|00998
allec_ids 2.1.3.15; 6.4.1.2;
allgo_ids GO:0003989; GO:0006633; GO:0009317; GO:0005524; GO:0016743; GO:2001295;
allko_ids K01962;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725667.1 1 317 evalue:9.2e-147 qcov:99.40 identity:82.60;
kegg_pathway_id 00253; 00061; 00640; 00620;
kegg_pathway_name Tetracycline biosynthesis; Fatty acid biosynthesis; Propanoate metabolism; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY0-881; PWY-4381; FASYN-INITIAL-PWY; PWY-6113; PWY-6285; PWY-5743; PWY-5789; PWY-5156; PWY0-1264;
metacyc_pathway_name superpathway of fatty acid biosynthesis I (E. coli);; fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis initiation (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; 3-hydroxypropanoate cycle;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; superpathway of fatty acid biosynthesis II (plant);; biotin-carboxyl carrier protein assembly;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;; Autotrophic-CO2-Fixation;; Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis;;
pfam_acc PF03255; PF01039;
pfam_desc Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; Carboxyl transferase domain;
pfam_id ACCA; Carboxyl_trans;
pfam_target db:Pfam-A.hmm|PF03255.14 evalue:3.1e-64 score:214.4 best_domain_score:213.7 name:ACCA; db:Pfam-A.hmm|PF01039.22 evalue:1.7e-16 score:59.2 best_domain_score:59.0 name:Carboxyl_trans;
sprot_desc Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha;
sprot_id sp|B8GQ68|ACCA_THISH;
sprot_target db:uniprot_sprot|sp|B8GQ68|ACCA_THISH 1 317 evalue:5.3e-125 qcov:99.40 identity:69.10;
tigrfam_acc TIGR00513;
tigrfam_desc acetyl-CoA carboxylase, carboxyl transferase, alpha subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accA;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00513 evalue:2.1e-157 score:522.7 best_domain_score:522.5 name:TIGR00513;
56527 55592 CDS
ID metaerg.pl|00999
allec_ids 6.1.1.-;
allgo_ids GO:0004812; GO:0005524; GO:0043039; GO:0008270; GO:0006400;
allko_ids K01894;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725666.1 23 307 evalue:6.7e-102 qcov:91.60 identity:65.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY490-4;
metacyc_pathway_name L-asparagine biosynthesis III (tRNA-dependent);;
metacyc_pathway_type ASPARAGINE-SYN; Aminoacyl-tRNAs-Charging;;
pfam_acc PF00749;
pfam_desc tRNA synthetases class I (E and Q), catalytic domain;
pfam_id tRNA-synt_1c;
pfam_target db:Pfam-A.hmm|PF00749.21 evalue:1.7e-40 score:138.1 best_domain_score:71.0 name:tRNA-synt_1c;
sprot_desc Glutamyl-Q tRNA(Asp) synthetase;
sprot_id sp|Q7NSJ1|GLUQ_CHRVO;
sprot_target db:uniprot_sprot|sp|Q7NSJ1|GLUQ_CHRVO 24 302 evalue:1.8e-77 qcov:89.70 identity:52.10;
tigrfam_acc TIGR03838;
tigrfam_desc glutamyl-queuosine tRNA(Asp) synthetase;
tigrfam_mainrole Protein synthesis;
tigrfam_name queuosine_YadB;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03838 evalue:1.3e-99 score:332.2 best_domain_score:331.9 name:TIGR03838;
56567 57445 CDS
ID metaerg.pl|01000
allec_ids 3.4.24.-;
allgo_ids GO:0004222; GO:0006508; GO:0016021; GO:0005886; GO:0008270;
allko_ids K03799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725665.1 1 292 evalue:3.1e-125 qcov:100.00 identity:79.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:5.7e-39 score:133.2 best_domain_score:132.5 name:Peptidase_M48;
sprot_desc Protease HtpX;
sprot_id sp|B8GTV4|HTPX_THISH;
sprot_target db:uniprot_sprot|sp|B8GTV4|HTPX_THISH 1 288 evalue:6.4e-93 qcov:98.60 identity:61.00;
tm_num 4;
56567 57445 transmembrane_helix
ID metaerg.pl|01001
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i56585-56653o56681-56749i57038-57106o57149-57217i;
59557 57494 CDS
ID metaerg.pl|01002
allgo_ids GO:0006355;
allko_ids K03388;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725664.1 1 686 evalue:6.7e-288 qcov:99.90 identity:72.40;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00563; PF00990; PF00989; PF13188;
pfam_desc EAL domain; Diguanylate cyclase, GGDEF domain; PAS fold; PAS domain;
pfam_id EAL; GGDEF; PAS; PAS_8;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:6e-31 score:107.0 best_domain_score:105.8 name:EAL; db:Pfam-A.hmm|PF00990.21 evalue:3.2e-19 score:68.5 best_domain_score:66.9 name:GGDEF; db:Pfam-A.hmm|PF00989.25 evalue:6.5e-06 score:25.4 best_domain_score:22.7 name:PAS; db:Pfam-A.hmm|PF13188.7 evalue:1e-05 score:24.7 best_domain_score:22.8 name:PAS_8;
tigrfam_acc TIGR00229; TIGR00254;
tigrfam_desc PAS domain S-box protein; diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Regulatory functions; Signal transduction;
tigrfam_name sensory_box; GGDEF;
tigrfam_sub1role Small molecule interactions; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.1e-09 score:37.6 best_domain_score:36.2 name:TIGR00229; db:TIGRFAMs.hmm|TIGR00254 evalue:1.4e-13 score:50.0 best_domain_score:48.0 name:TIGR00254;
60671 59637 CDS
ID metaerg.pl|01003
allec_ids 5.4.3.-;
allgo_ids GO:0003824; GO:0051536; GO:0051539; GO:0016853; GO:0046872;
allko_ids K01843; K19810;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725663.1 9 344 evalue:6.7e-119 qcov:97.70 identity:64.00;
kegg_pathway_id 00310;
kegg_pathway_name Lysine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF13353; PF13394; PF04055;
pfam_desc 4Fe-4S single cluster domain; 4Fe-4S single cluster domain; Radical SAM superfamily;
pfam_id Fer4_12; Fer4_14; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF13353.6 evalue:1.4e-05 score:24.7 best_domain_score:24.0 name:Fer4_12; db:Pfam-A.hmm|PF13394.6 evalue:2.1e-05 score:23.8 best_domain_score:23.2 name:Fer4_14; db:Pfam-A.hmm|PF04055.21 evalue:3.5e-08 score:33.3 best_domain_score:32.2 name:Radical_SAM;
sprot_desc L-lysine 2,3-aminomutase;
sprot_id sp|Q8ZKB8|EPMB_SALTY;
sprot_target db:uniprot_sprot|sp|Q8ZKB8|EPMB_SALTY 20 343 evalue:2.7e-74 qcov:94.20 identity:45.30;
tigrfam_acc TIGR00238; TIGR03821;
tigrfam_desc KamA family protein; EF-P beta-lysylation protein EpmB;
tigrfam_mainrole Cellular processes; Protein fate;
tigrfam_name TIGR00238; EFP_modif_epmB;
tigrfam_sub1role Adaptations to atypical conditions; Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00238 evalue:1.7e-87 score:292.6 best_domain_score:292.4 name:TIGR00238; db:TIGRFAMs.hmm|TIGR03821 evalue:1.1e-127 score:424.7 best_domain_score:424.5 name:TIGR03821;
60726 61295 CDS
ID metaerg.pl|01004
allgo_ids GO:0003746; GO:0006414; GO:0005737;
allko_ids K02356;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725662.1 1 189 evalue:1.7e-95 qcov:100.00 identity:91.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01132; PF08207; PF09285;
pfam_desc Elongation factor P (EF-P) OB domain; Elongation factor P (EF-P) KOW-like domain; Elongation factor P, C-terminal;
pfam_id EFP; EFP_N; Elong-fact-P_C;
pfam_target db:Pfam-A.hmm|PF01132.20 evalue:6.5e-23 score:79.8 best_domain_score:77.6 name:EFP; db:Pfam-A.hmm|PF08207.12 evalue:1.4e-26 score:91.5 best_domain_score:89.5 name:EFP_N; db:Pfam-A.hmm|PF09285.11 evalue:1.2e-26 score:91.4 best_domain_score:90.1 name:Elong-fact-P_C;
sprot_desc Elongation factor P;
sprot_id sp|Q0AAU9|EFP_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0AAU9|EFP_ALKEH 1 188 evalue:5.2e-80 qcov:99.50 identity:73.90;
tigrfam_acc TIGR00038;
tigrfam_desc translation elongation factor P;
tigrfam_mainrole Protein synthesis;
tigrfam_name efp;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00038 evalue:1.9e-77 score:258.3 best_domain_score:258.1 name:TIGR00038;
61298 62632 CDS
ID metaerg.pl|01005
allec_ids 3.5.4.28;
allgo_ids GO:0016787; GO:0090614; GO:0046872; GO:0050270;
allko_ids K12960;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725661.1 6 435 evalue:1.6e-197 qcov:96.80 identity:78.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:7.8e-73 score:245.0 best_domain_score:244.8 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:1.1e-21 score:77.1 best_domain_score:66.4 name:Amidohydro_3;
sprot_desc 5-methylthioadenosine/S-adenosylhomocysteine deaminase;
sprot_id sp|C5BSJ0|MTAD_TERTT;
sprot_target db:uniprot_sprot|sp|C5BSJ0|MTAD_TERTT 12 435 evalue:2.5e-117 qcov:95.50 identity:47.40;
62629 63363 CDS
ID metaerg.pl|01006
allec_ids 2.1.1.222; 2.1.1.64;
allgo_ids GO:0008168; GO:0008425; GO:0008689; GO:0006744;
allko_ids K00568; K00599; K03183;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725660.1 14 242 evalue:7.1e-99 qcov:93.90 identity:77.70;
kegg_pathway_id 00450; 00626; 00380; 00150; 00340; 00350; 00130;
kegg_pathway_name Selenoamino acid metabolism; Naphthalene and anthracene degradation; Tryptophan metabolism; Androgen and estrogen metabolism; Histidine metabolism; Tyrosine metabolism; Ubiquinone biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-5857; PWY-5856; PWY-5855;
metacyc_pathway_name ubiquinol-10 biosynthesis (prokaryotic);; ubiquinol-9 biosynthesis (prokaryotic);; ubiquinol-7 biosynthesis (prokaryotic);;
metacyc_pathway_type Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;;
pfam_acc PF02353; PF08241; PF08242; PF13489; PF13649; PF13847; PF08003; PF05175; PF05401; PF01209;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Protein of unknown function (DUF1698); Methyltransferase small domain; Nodulation protein S (NodS); ubiE/COQ5 methyltransferase family;
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; Methyltransf_9; MTS; NodS; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:7.5e-07 score:27.9 best_domain_score:27.7 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:6.6e-22 score:77.2 best_domain_score:76.5 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:4.9e-15 score:55.3 best_domain_score:54.8 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:1e-25 score:89.7 best_domain_score:89.4 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.7e-17 score:63.1 best_domain_score:62.5 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:8.5e-15 score:54.1 best_domain_score:53.7 name:Methyltransf_31; db:Pfam-A.hmm|PF08003.11 evalue:1.3e-06 score:26.9 best_domain_score:26.4 name:Methyltransf_9; db:Pfam-A.hmm|PF05175.14 evalue:4.4e-05 score:22.3 best_domain_score:21.7 name:MTS; db:Pfam-A.hmm|PF05401.11 evalue:7e-10 score:38.1 best_domain_score:37.7 name:NodS; db:Pfam-A.hmm|PF01209.18 evalue:8.6e-05 score:21.2 best_domain_score:20.8 name:Ubie_methyltran;
sprot_desc Ubiquinone biosynthesis O-methyltransferase;
sprot_id sp|Q21IR9|UBIG_SACD2;
sprot_target db:uniprot_sprot|sp|Q21IR9|UBIG_SACD2 14 241 evalue:5.9e-76 qcov:93.40 identity:58.10;
tigrfam_acc TIGR01983;
tigrfam_desc 3-demethylubiquinone-9 3-O-methyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name UbiG;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR01983 evalue:8.7e-78 score:259.9 best_domain_score:259.7 name:TIGR01983;
63360 64028 CDS
ID metaerg.pl|01007
allec_ids 3.1.3.18;
allgo_ids GO:0046872; GO:0008967; GO:0005975; GO:0046295;
allko_ids K22292;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169582.1 1 220 evalue:1.1e-61 qcov:99.10 identity:59.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-181;
metacyc_pathway_name photorespiration;;
metacyc_pathway_type Photosynthesis;;
pfam_acc PF12710; PF13419; PF00702; PF13242;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD; HAD_2; Hydrolase; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:1.8e-07 score:31.0 best_domain_score:30.4 name:HAD; db:Pfam-A.hmm|PF13419.6 evalue:2.7e-32 score:111.5 best_domain_score:111.3 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:6.5e-20 score:71.5 best_domain_score:70.3 name:Hydrolase; db:Pfam-A.hmm|PF13242.6 evalue:9.3e-09 score:34.5 best_domain_score:33.8 name:Hydrolase_like;
sprot_desc Phosphoglycolate phosphatase;
sprot_id sp|Q4UVL3|GPH_XANC8;
sprot_target db:uniprot_sprot|sp|Q4UVL3|GPH_XANC8 7 211 evalue:2.7e-43 qcov:92.30 identity:43.90;
tigrfam_acc TIGR01509; TIGR01549;
tigrfam_desc HAD hydrolase, family IA, variant 3; HAD hydrolase, family IA, variant 1;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name HAD-SF-IA-v3; HAD-SF-IA-v1;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:4.1e-15 score:55.4 best_domain_score:38.5 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01549 evalue:7.5e-13 score:48.3 best_domain_score:34.6 name:TIGR01549;
64039 64920 CDS
ID metaerg.pl|01008
allgo_ids GO:0005737; GO:0006457; GO:0051082;
allko_ids K04083;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169581.1 5 293 evalue:2.3e-91 qcov:98.60 identity:59.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01430;
pfam_desc Hsp33 protein;
pfam_id HSP33;
pfam_target db:Pfam-A.hmm|PF01430.19 evalue:3.8e-77 score:258.5 best_domain_score:258.4 name:HSP33;
sprot_desc 33 kDa chaperonin;
sprot_id sp|Q3J9G2|HSLO_NITOC;
sprot_target db:uniprot_sprot|sp|Q3J9G2|HSLO_NITOC 1 278 evalue:2.2e-53 qcov:94.90 identity:43.20;
64920 65762 CDS
ID metaerg.pl|01009
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725658.1 1 278 evalue:1.0e-72 qcov:99.30 identity:53.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00494;
pfam_desc Squalene/phytoene synthase;
pfam_id SQS_PSY;
pfam_target db:Pfam-A.hmm|PF00494.19 evalue:2.6e-21 score:75.5 best_domain_score:75.1 name:SQS_PSY;
66706 66242 CDS
ID metaerg.pl|01010
allgo_ids GO:0019867;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169580.1 5 154 evalue:6.4e-45 qcov:97.40 identity:59.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF03843;
pfam_desc Outer membrane lipoprotein Slp family;
pfam_id Slp;
pfam_target db:Pfam-A.hmm|PF03843.13 evalue:3.4e-35 score:119.9 best_domain_score:119.7 name:Slp;
sp YES;
66242 66292 signal_peptide
ID metaerg.pl|01011
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
67004 66720 CDS
ID metaerg.pl|01012
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725656.1 1 94 evalue:1.7e-32 qcov:100.00 identity:72.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF09723;
pfam_desc Zinc ribbon domain;
pfam_id Zn-ribbon_8;
pfam_target db:Pfam-A.hmm|PF09723.10 evalue:5.2e-13 score:48.1 best_domain_score:47.7 name:Zn-ribbon_8;
tigrfam_acc TIGR02605;
tigrfam_desc putative regulatory protein, FmdB family;
tigrfam_mainrole Regulatory functions;
tigrfam_name CxxC_CxxC_SSSS;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02605 evalue:3e-11 score:42.4 best_domain_score:41.3 name:TIGR02605;
67123 67809 CDS
ID metaerg.pl|01013
allec_ids 1.-.-.-;
allgo_ids GO:0003824; GO:0050662; GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169579.1 1 223 evalue:5.7e-74 qcov:97.80 identity:58.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-5271; PWY-4302; PWY-2821; PWY-5826; PWY-5479; PWY-5987; PWY-5469; PWYG-321; PWY-6113;
metacyc_pathway_name abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; sesamin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00106; PF13561; PF01370; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain;
pfam_id adh_short; adh_short_C2; Epimerase; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:4.3e-26 score:90.8 best_domain_score:90.5 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.1e-21 score:75.8 best_domain_score:75.5 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:3e-06 score:26.1 best_domain_score:25.6 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:9.7e-07 score:28.1 best_domain_score:27.5 name:KR;
sprot_desc Uncharacterized oxidoreductase TM_0019;
sprot_id sp|Q56318|Y019_THEMA;
sprot_target db:uniprot_sprot|sp|Q56318|Y019_THEMA 8 190 evalue:1.2e-09 qcov:80.30 identity:24.20;
67809 68153 CDS
ID metaerg.pl|01014
allec_ids 3.9.1.-;
allgo_ids GO:0016787; GO:0000166;
allko_ids K02503;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725654.1 1 114 evalue:9.5e-46 qcov:100.00 identity:78.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF11969; PF01230;
pfam_desc Scavenger mRNA decapping enzyme C-term binding; HIT domain;
pfam_id DcpS_C; HIT;
pfam_target db:Pfam-A.hmm|PF11969.8 evalue:5.4e-23 score:80.9 best_domain_score:80.8 name:DcpS_C; db:Pfam-A.hmm|PF01230.23 evalue:1.6e-28 score:98.6 best_domain_score:98.4 name:HIT;
sprot_desc Purine nucleoside phosphoramidase;
sprot_id sp|P0ACE8|HINT_ECO57;
sprot_target db:uniprot_sprot|sp|P0ACE8|HINT_ECO57 3 109 evalue:4.2e-32 qcov:93.90 identity:59.80;
68778 68248 CDS
ID metaerg.pl|01015
allec_ids 1.15.1.1;
allgo_ids GO:0006801; GO:0046872; GO:0042597; GO:0004784;
allko_ids K04565;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Aquisalimonadaceae;g__Aquisalimonas;s__Aquisalimonas asiatica;
genomedb_acc GCF_900110585.1;
genomedb_target db:genomedb|GCF_900110585.1|WP_091640277.1 1 176 evalue:1.5e-53 qcov:100.00 identity:60.60;
kegg_pathway_id 05014;
kegg_pathway_name Amyotrophic lateral sclerosis (ALS);
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id DETOX1-PWY;
metacyc_pathway_name superoxide radicals degradation;;
metacyc_pathway_type REACTIVE-OXYGEN-SPECIES-DEGRADATION;;
pfam_acc PF00080;
pfam_desc Copper/zinc superoxide dismutase (SODC);
pfam_id Sod_Cu;
pfam_target db:Pfam-A.hmm|PF00080.20 evalue:1.5e-36 score:124.9 best_domain_score:124.7 name:Sod_Cu;
sp YES;
sprot_desc Superoxide dismutase [Cu-Zn];
sprot_id sp|P20379|SODC_CAUVC;
sprot_target db:uniprot_sprot|sp|P20379|SODC_CAUVC 33 173 evalue:9.0e-34 qcov:80.10 identity:49.70;
68248 68310 signal_peptide
ID metaerg.pl|01016
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
68956 70314 CDS
ID metaerg.pl|01017
allec_ids 2.6.1.76;
allgo_ids GO:0008483; GO:0030170; GO:0005737; GO:0045303; GO:0042400;
allko_ids K15785;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725652.1 1 448 evalue:1.6e-208 qcov:99.10 identity:78.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-6409; PWY-6562; P101-PWY; PWY-6565; PWY-761;
metacyc_pathway_name pyoverdine I biosynthesis;; norspermidine biosynthesis;; ectoine biosynthesis;; superpathway of polyamine biosynthesis III;; rhizobactin 1021 biosynthesis;;
metacyc_pathway_type Siderophores-Biosynthesis;; Polyamine-Biosynthesis;; Polyamine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; Siderophores-Biosynthesis;;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:9.4e-84 score:280.6 best_domain_score:280.3 name:Aminotran_3;
sprot_desc Diaminobutyrate--2-oxoglutarate transaminase;
sprot_id sp|E1V7V7|DOED_HALED;
sprot_target db:uniprot_sprot|sp|E1V7V7|DOED_HALED 14 451 evalue:3.2e-107 qcov:96.90 identity:42.10;
70717 70448 CDS
ID metaerg.pl|01018
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725651.1 1 89 evalue:2.0e-22 qcov:100.00 identity:55.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF14542;
pfam_desc GCN5-related N-acetyl-transferase;
pfam_id Acetyltransf_CG;
pfam_target db:Pfam-A.hmm|PF14542.6 evalue:1.6e-25 score:88.2 best_domain_score:88.0 name:Acetyltransf_CG;
71979 70744 CDS
ID metaerg.pl|01019
allec_ids 1.1.1.95;
allgo_ids GO:0016616; GO:0051287; GO:0055114; GO:0004617; GO:0006564;
allko_ids K00058; K00100; K00018;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725650.1 6 411 evalue:1.6e-183 qcov:98.80 identity:79.30;
kegg_pathway_id 00630; 00625; 00120; 00650; 00260; 00051;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Tetrachloroethene degradation; Bile acid biosynthesis; Butanoate metabolism; Glycine, serine and threonine metabolism; Fructose and mannose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id SER-GLYSYN-PWY; SERSYN-PWY; SULFATE-CYS-PWY;
metacyc_pathway_name superpathway of L-serine and glycine biosynthesis I;; L-serine biosynthesis I;; superpathway of sulfate assimilation and cysteine biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; SERINE-BIOSYNTHESIS;; Sulfur-Metabolism; Super-Pathways;;
pfam_acc PF00389; PF02826; PF03446;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id 2-Hacid_dh; 2-Hacid_dh_C; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF00389.30 evalue:4.1e-36 score:122.8 best_domain_score:122.5 name:2-Hacid_dh; db:Pfam-A.hmm|PF02826.19 evalue:6.3e-50 score:168.2 best_domain_score:167.2 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF03446.15 evalue:0.00016 score:21.1 best_domain_score:19.9 name:NAD_binding_2;
sprot_desc D-3-phosphoglycerate dehydrogenase;
sprot_id sp|P0A9T2|SERA_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9T2|SERA_ECO57 7 411 evalue:3.1e-138 qcov:98.50 identity:60.70;
72071 73435 CDS
ID metaerg.pl|01020
allec_ids 1.1.99.-;
allgo_ids GO:0003824; GO:0050660; GO:0031234; GO:0005739; GO:0051990; GO:0004458; GO:0071949; GO:0019516; GO:0022904;
allko_ids K00102; K03777; K00075; K00004; K18204;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725649.1 7 451 evalue:3.0e-191 qcov:98.00 identity:73.50;
kegg_pathway_id 00530; 00650; 00620;
kegg_pathway_name Aminosugars metabolism; Butanoate metabolism; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id 12DICHLORETHDEG-PWY; P221-PWY; PWY-6509; P421-PWY;
metacyc_pathway_name 1,2-dichloroethane degradation;; octane oxidation;; methanol oxidation to formaldehyde III;; 4-nitrotoluene degradation I;;
metacyc_pathway_type CHLORINATED-COMPOUNDS-DEG;; Other-Degradation;; Methanol-Oxidation;; 4-Nitrotoluene-Degradation;;
pfam_acc PF02913; PF01565;
pfam_desc FAD linked oxidases, C-terminal domain; FAD binding domain;
pfam_id FAD-oxidase_C; FAD_binding_4;
pfam_target db:Pfam-A.hmm|PF02913.19 evalue:8e-56 score:188.7 best_domain_score:188.3 name:FAD-oxidase_C; db:Pfam-A.hmm|PF01565.23 evalue:2e-37 score:127.3 best_domain_score:126.7 name:FAD_binding_4;
sprot_desc D-2-hydroxyglutarate dehydrogenase, mitochondrial;
sprot_id sp|Q1JPD3|D2HDH_BOVIN;
sprot_target db:uniprot_sprot|sp|Q1JPD3|D2HDH_BOVIN 11 451 evalue:3.8e-76 qcov:97.10 identity:38.90;
73515 75584 CDS
ID metaerg.pl|01021
allec_ids 3.4.21.-;
allgo_ids GO:0006508; GO:0004252;
allko_ids K01303; K01730;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725648.1 1 677 evalue:2.1e-265 qcov:98.30 identity:63.30;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00930; PF10647; PF07676; PF02129; PF00326;
pfam_desc Dipeptidyl peptidase IV (DPP IV) N-terminal region; Lipoprotein LpqB beta-propeller domain; WD40-like Beta Propeller Repeat; X-Pro dipeptidyl-peptidase (S15 family); Prolyl oligopeptidase family;
pfam_id DPPIV_N; Gmad1; PD40; Peptidase_S15; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00930.21 evalue:2e-07 score:29.3 best_domain_score:16.6 name:DPPIV_N; db:Pfam-A.hmm|PF10647.9 evalue:0.00014 score:21.0 best_domain_score:9.9 name:Gmad1; db:Pfam-A.hmm|PF07676.12 evalue:1.6e-13 score:49.4 best_domain_score:16.3 name:PD40; db:Pfam-A.hmm|PF02129.18 evalue:1.4e-07 score:30.6 best_domain_score:28.8 name:Peptidase_S15; db:Pfam-A.hmm|PF00326.21 evalue:2.4e-43 score:147.3 best_domain_score:146.8 name:Peptidase_S9;
sp YES;
sprot_desc Uncharacterized peptidase YuxL;
sprot_id sp|P39839|YUXL_BACSU;
sprot_target db:uniprot_sprot|sp|P39839|YUXL_BACSU 24 655 evalue:1.3e-38 qcov:91.70 identity:23.60;
tm_num 1;
73515 73577 signal_peptide
ID metaerg.pl|01022
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
73515 75584 transmembrane_helix
ID metaerg.pl|01023
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i73533-73586o;
75568 75960 CDS
ID metaerg.pl|01024
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Marinobacter;s__Marinobacter segnicrescens;
genomedb_acc GCF_900111555.1;
genomedb_target db:genomedb|GCF_900111555.1|WP_091851871.1 7 125 evalue:1.1e-45 qcov:91.50 identity:72.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF09996;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2237);
pfam_id DUF2237;
pfam_target db:Pfam-A.hmm|PF09996.9 evalue:6.9e-56 score:186.4 best_domain_score:186.2 name:DUF2237;
75960 76391 CDS
ID metaerg.pl|01025
allec_ids 3.1.2.-;
allgo_ids GO:0005829; GO:0061522; GO:0016289;
allko_ids K19222;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725647.1 1 141 evalue:2.1e-42 qcov:98.60 identity:64.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-5996; ALL-CHORISMATE-PWY; PWY-5897; PWY0-1337; PWY-5850; PWY-5899; PWY-5838; PWY-5861; PWY-5791; PWY-6453; PWY-981; PWY-6320; PWY-5837; PWY-5840; PWY-5863; PWY-5898; PWY-5860; PWY-5896; PWY-5845; PWY-5862;
metacyc_pathway_name oleate biosynthesis II (animals and fungi);; superpathway of chorismate metabolism;; superpathway of menaquinol-11 biosynthesis;; oleate β-oxidation;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; superpathway of demethylmenaquinol-8 biosynthesis I;; ; stigma estolide biosynthesis;; salicylate biosynthesis II;; phaselate biosynthesis;; 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of menaquinol-7 biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-12 biosynthesis;; superpathway of demethylmenaquinol-6 biosynthesis I;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;;
metacyc_pathway_type Oleate-Biosynthesis;; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Fatty-Acid-Degradation;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; ; Lipid-Biosynthesis;; Salicylate-Biosynthesis;; AROMATIC-COMPOUNDS-BIOSYN;; DHNA-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF03061; PF13622;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily;
pfam_id 4HBT; 4HBT_3;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:5.2e-16 score:58.0 best_domain_score:57.5 name:4HBT; db:Pfam-A.hmm|PF13622.6 evalue:8.4e-07 score:28.7 best_domain_score:28.5 name:4HBT_3;
sprot_desc Putative esterase PA1618;
sprot_id sp|Q9I3A4|Y1618_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I3A4|Y1618_PSEAE 10 143 evalue:2.0e-31 qcov:93.70 identity:50.00;
tigrfam_acc TIGR00369;
tigrfam_desc uncharacterized domain 1;
tigrfam_name unchar_dom_1;
tigrfam_target db:TIGRFAMs.hmm|TIGR00369 evalue:3.3e-36 score:123.1 best_domain_score:122.8 name:TIGR00369;
76936 76415 CDS
ID metaerg.pl|01026
allgo_ids GO:0019867;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725646.1 1 173 evalue:1.5e-42 qcov:100.00 identity:51.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF05433;
pfam_desc Glycine zipper 2TM domain;
pfam_id Rick_17kDa_Anti;
pfam_target db:Pfam-A.hmm|PF05433.15 evalue:9.1e-10 score:37.5 best_domain_score:36.7 name:Rick_17kDa_Anti;
sp YES;
76415 76474 signal_peptide
ID metaerg.pl|01027
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
77142 79187 CDS
ID metaerg.pl|01028
allgo_ids GO:0005525; GO:0003924; GO:0003746;
allko_ids K02355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725645.1 1 681 evalue:0.0e+00 qcov:100.00 identity:80.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00679; PF14492; PF03764; PF00009;
pfam_desc Elongation factor G C-terminus; Elongation Factor G, domain II; Elongation factor G, domain IV; Elongation factor Tu GTP binding domain;
pfam_id EFG_C; EFG_II; EFG_IV; GTP_EFTU;
pfam_target db:Pfam-A.hmm|PF00679.24 evalue:5.4e-25 score:86.5 best_domain_score:85.6 name:EFG_C; db:Pfam-A.hmm|PF14492.6 evalue:8.1e-26 score:89.2 best_domain_score:88.1 name:EFG_II; db:Pfam-A.hmm|PF03764.18 evalue:2e-36 score:123.6 best_domain_score:122.2 name:EFG_IV; db:Pfam-A.hmm|PF00009.27 evalue:8.5e-36 score:122.5 best_domain_score:122.0 name:GTP_EFTU;
sprot_desc Elongation factor G-like protein;
sprot_id sp|Q9X1Y4|EFGL_THEMA;
sprot_target db:uniprot_sprot|sp|Q9X1Y4|EFGL_THEMA 9 671 evalue:7.6e-121 qcov:97.40 identity:36.40;
tigrfam_acc TIGR00231;
tigrfam_desc small GTP-binding protein domain;
tigrfam_mainrole Unknown function;
tigrfam_name small_GTP;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:9.6e-14 score:50.6 best_domain_score:49.7 name:TIGR00231;
79193 79762 CDS
ID metaerg.pl|01029
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
sp YES;
79193 79255 signal_peptide
ID metaerg.pl|01030
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
79756 80340 CDS
ID metaerg.pl|01031
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
sp YES;
tm_num 1;
79756 79839 signal_peptide
ID metaerg.pl|01032
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
79756 80340 transmembrane_helix
ID metaerg.pl|01033
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i79768-79836o;
80747 81337 CDS
ID metaerg.pl|01034
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
sp YES;
80747 80809 lipoprotein_signal_peptide
ID metaerg.pl|01035
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
82780 81728 CDS
ID metaerg.pl|01036
allgo_ids GO:0003677; GO:0004803; GO:0006313;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726110.1 11 350 evalue:8.2e-149 qcov:97.10 identity:76.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01797;
pfam_desc Transposase IS200 like;
pfam_id Y1_Tnp;
pfam_target db:Pfam-A.hmm|PF01797.16 evalue:9.3e-05 score:21.8 best_domain_score:14.4 name:Y1_Tnp;
83208 82924 CDS
ID metaerg.pl|01037
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
tm_num 3;
83208 82924 transmembrane_helix
ID metaerg.pl|01038
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology o82933-82986i83005-83073o83104-83172i;
84680 85270 CDS
ID metaerg.pl|01039
allgo_ids GO:0003677; GO:0003700; GO:0006352; GO:0006355; GO:0016987;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Aquimonas;s__Aquimonas voraii;
genomedb_acc GCF_900101825.1;
genomedb_target db:genomedb|GCF_900101825.1|WP_091241101.1 8 191 evalue:4.9e-42 qcov:93.90 identity:51.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF07638; PF08281;
pfam_desc ECF sigma factor; Sigma-70, region 4;
pfam_id Sigma70_ECF; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF07638.11 evalue:2.7e-43 score:147.2 best_domain_score:147.1 name:Sigma70_ECF; db:Pfam-A.hmm|PF08281.12 evalue:9.8e-08 score:30.8 best_domain_score:29.6 name:Sigma70_r4_2;
tigrfam_acc TIGR02937; TIGR02999;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor, TIGR02999 family;
tigrfam_name sigma70-ECF; Sig-70_X6;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:1.1e-13 score:50.3 best_domain_score:49.8 name:TIGR02937; db:TIGRFAMs.hmm|TIGR02999 evalue:2.8e-57 score:192.7 best_domain_score:192.4 name:TIGR02999;
85263 87983 CDS
ID metaerg.pl|01040
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K07675; K08841; K02178; K13303; K13304; K05121; K05688; K04688; K08853; K12767; K13414; K02486; K04372; K04367; K01728; K08847; K04443; K05097; K05096; K04445; K02480; K05091; K08850; K01768; K08286; K04421; K04420; K05098; K04373; K08792; K08809; K05112; K05103; K08855; K08856; K08282; K08333; K05102; K08897; K08854; K08790; K11912; K11228; K05105; K04444; K08846; K05744; K08848; K11889; K04442; K11623; K05111; K08810; K05113; K08884; K07778; K07683; K11265; K07673; K03407; K07682; K04424; K05743; K00924; K13302;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas metalli;
genomedb_acc GCF_000747155.1;
genomedb_target db:genomedb|GCF_000747155.1|WP_052575270.1 3 867 evalue:3.9e-102 qcov:95.50 identity:34.40;
kegg_pathway_id 02020; 04011; 04010; 04110; 05012; 00040; 04150; 04360; 04140; 04640; 04530; 04111; 00230; 04510;
kegg_pathway_name Two-component system - General; MAPK signaling pathway - yeast; MAPK signaling pathway; Cell cycle; Parkinson's disease; Pentose and glucuronate interconversions; mTOR signaling pathway; Axon guidance; Regulation of autophagy; Hematopoietic cell lineage; Tight junction; Cell cycle - yeast; Purine metabolism; Focal adhesion;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00069; PF07714; PF00515; PF13424; PF07719; PF17874;
pfam_desc Protein kinase domain; Protein tyrosine kinase; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; MalT-like TPR region;
pfam_id Pkinase; Pkinase_Tyr; TPR_1; TPR_12; TPR_2; TPR_MalT;
pfam_target db:Pfam-A.hmm|PF00069.25 evalue:1e-41 score:142.3 best_domain_score:141.7 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:1.6e-28 score:98.9 best_domain_score:98.3 name:Pkinase_Tyr; db:Pfam-A.hmm|PF00515.28 evalue:2.8e-08 score:32.5 best_domain_score:9.2 name:TPR_1; db:Pfam-A.hmm|PF13424.6 evalue:4.7e-16 score:58.1 best_domain_score:25.7 name:TPR_12; db:Pfam-A.hmm|PF07719.17 evalue:4.1e-09 score:35.1 best_domain_score:14.4 name:TPR_2; db:Pfam-A.hmm|PF17874.1 evalue:1e-08 score:34.2 best_domain_score:17.0 name:TPR_MalT;
88088 90148 CDS
ID metaerg.pl|01041
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725468.1 20 685 evalue:8.2e-185 qcov:97.10 identity:51.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF13229;
pfam_desc Right handed beta helix region;
pfam_id Beta_helix;
pfam_target db:Pfam-A.hmm|PF13229.6 evalue:3e-06 score:26.4 best_domain_score:18.2 name:Beta_helix;
sp YES;
88088 88156 signal_peptide
ID metaerg.pl|01042
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
90505 90167 CDS
ID metaerg.pl|01043
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
91093 92799 CDS
ID metaerg.pl|01044
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725598.1 1 568 evalue:4.8e-239 qcov:100.00 identity:69.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF08811;
pfam_desc Protein of unknown function (DUF1800);
pfam_id DUF1800;
pfam_target db:Pfam-A.hmm|PF08811.11 evalue:2.2e-111 score:372.2 best_domain_score:371.9 name:DUF1800;
92832 94142 CDS
ID metaerg.pl|01045
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725597.1 2 435 evalue:8.6e-188 qcov:99.50 identity:71.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF07394;
pfam_desc Protein of unknown function (DUF1501);
pfam_id DUF1501;
pfam_target db:Pfam-A.hmm|PF07394.12 evalue:5.1e-27 score:94.2 best_domain_score:91.3 name:DUF1501;
94328 95317 CDS
ID metaerg.pl|01046
allec_ids 1.3.1.104;
allgo_ids GO:0055114; GO:0005739; GO:0019166; GO:0006633; GO:0006631;
allko_ids K13953; K00001; K07512;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_M;s__Pseudomonas_M sp002286785;
genomedb_acc GCF_002286785.1;
genomedb_target db:genomedb|GCF_002286785.1|WP_095599275.1 5 329 evalue:5.8e-120 qcov:98.80 identity:66.20;
kegg_pathway_id 00350; 00071; 00120; 00624; 00010; 00062; 00641;
kegg_pathway_name Tyrosine metabolism; Fatty acid metabolism; Bile acid biosynthesis; 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis; Fatty acid elongation in mitochondria; 3-Chloroacrylic acid degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF08240; PF00107; PF13602;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N; ADH_zinc_N_2;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:3.8e-09 score:35.6 best_domain_score:33.9 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:1.3e-19 score:69.7 best_domain_score:69.2 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:1.3e-13 score:51.4 best_domain_score:50.7 name:ADH_zinc_N_2;
sprot_desc Enoyl-[acyl-carrier-protein] reductase, mitochondrial;
sprot_id sp|Q7YS70|MECR_BOVIN;
sprot_target db:uniprot_sprot|sp|Q7YS70|MECR_BOVIN 14 326 evalue:1.0e-51 qcov:95.10 identity:37.80;
95771 98827 CDS
ID metaerg.pl|01047
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter daecheongensis;
genomedb_acc GCF_900141805.1;
genomedb_target db:genomedb|GCF_900141805.1|WP_073111337.1 24 786 evalue:1.7e-141 qcov:75.00 identity:39.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF17164;
pfam_desc Domain of unknown function (DUF5122) beta-propeller;
pfam_id DUF5122;
pfam_target db:Pfam-A.hmm|PF17164.4 evalue:4.7e-12 score:45.2 best_domain_score:20.5 name:DUF5122;
sp YES;
tm_num 1;
95771 95860 signal_peptide
ID metaerg.pl|01048
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
95771 98827 transmembrane_helix
ID metaerg.pl|01049
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i95807-95875o;
99476 98847 CDS
ID metaerg.pl|01050
allec_ids 2.7.1.24;
allgo_ids GO:0004140; GO:0005524; GO:0015937; GO:0005737;
allko_ids K00859;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725610.1 12 209 evalue:2.1e-51 qcov:94.70 identity:58.10;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PANTOSYN-PWY; PWY-4242; COA-PWY; PWY-4221;
metacyc_pathway_name superpathway of coenzyme A biosynthesis I (bacteria);; ; coenzyme A biosynthesis I (prokaryotic);; superpathway of coenzyme A biosynthesis II (plants);;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; ; CoA-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;;
pfam_acc PF13671; PF01121;
pfam_desc AAA domain; Dephospho-CoA kinase;
pfam_id AAA_33; CoaE;
pfam_target db:Pfam-A.hmm|PF13671.6 evalue:3.3e-07 score:29.8 best_domain_score:25.9 name:AAA_33; db:Pfam-A.hmm|PF01121.20 evalue:2.7e-61 score:205.6 best_domain_score:205.4 name:CoaE;
sprot_desc Dephospho-CoA kinase;
sprot_id sp|Q6D0J6|COAE_PECAS;
sprot_target db:uniprot_sprot|sp|Q6D0J6|COAE_PECAS 15 203 evalue:1.8e-41 qcov:90.40 identity:50.30;
tigrfam_acc TIGR00152;
tigrfam_desc dephospho-CoA kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00152;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00152 evalue:6.5e-57 score:191.6 best_domain_score:191.3 name:TIGR00152;
100635 99481 CDS
ID metaerg.pl|01051
allgo_ids GO:0030288; GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B paradoxus;
genomedb_acc GCF_000227685.2;
genomedb_target db:genomedb|GCF_000227685.2|WP_006748700.1 21 382 evalue:1.0e-128 qcov:94.30 identity:59.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF07995;
pfam_desc Glucose / Sorbosone dehydrogenase;
pfam_id GSDH;
pfam_target db:Pfam-A.hmm|PF07995.11 evalue:2.5e-121 score:404.3 best_domain_score:404.1 name:GSDH;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P73001|Y1608_SYNY3;
sprot_target db:uniprot_sprot|sp|P73001|Y1608_SYNY3 7 380 evalue:1.6e-80 qcov:97.40 identity:41.50;
tm_num 1;
99481 99567 signal_peptide
ID metaerg.pl|01052
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
100635 99481 transmembrane_helix
ID metaerg.pl|01053
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i99499-99567o;
101542 100673 CDS
ID metaerg.pl|01054
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas mobilis;
genomedb_acc GCF_900103035.1;
genomedb_target db:genomedb|GCF_900103035.1|WP_090283707.1 8 287 evalue:1.7e-78 qcov:96.90 identity:51.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00561; PF12697; PF12146; PF03096;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33; Ndr family;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4; Ndr;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:1.7e-17 score:63.1 best_domain_score:62.6 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:2.1e-18 score:67.0 best_domain_score:66.6 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:4.8e-21 score:74.3 best_domain_score:74.1 name:Hydrolase_4; db:Pfam-A.hmm|PF03096.14 evalue:4.5e-06 score:24.8 best_domain_score:24.2 name:Ndr;
103693 101549 CDS
ID metaerg.pl|01055
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114;
allko_ids K03885; K00219; K00302; K00356; K00529; K01008; K00266; K00362; K00363; K00382; K00176; K03388; K00383; K00384;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725609.1 8 714 evalue:4.4e-298 qcov:99.00 identity:73.40;
kegg_pathway_id 00071; 00190; 00360; 00910; 00252; 00251; 00260; 00020; 00010; 00280; 00790; 00450; 00620; 00240; 00480; 00720;
kegg_pathway_name Fatty acid metabolism; Oxidative phosphorylation; Phenylalanine metabolism; Nitrogen metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle); Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation; Folate biosynthesis; Selenoamino acid metabolism; Pyruvate metabolism; Pyrimidine metabolism; Glutathione metabolism; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF02737; PF01266; PF00890; PF01134; PF03486; PF13450; PF00070; PF07992; PF13738; PF02852; PF09335;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; FAD dependent oxidoreductase; FAD binding domain; Glucose inhibited division protein A; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; SNARE associated Golgi protein;
pfam_id 3HCDH_N; DAO; FAD_binding_2; GIDA; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Pyr_redox_dim; SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF02737.18 evalue:5.8e-05 score:22.3 best_domain_score:18.3 name:3HCDH_N; db:Pfam-A.hmm|PF01266.24 evalue:9.4e-07 score:27.9 best_domain_score:11.5 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:6e-05 score:21.5 best_domain_score:18.4 name:FAD_binding_2; db:Pfam-A.hmm|PF01134.22 evalue:1.9e-10 score:39.6 best_domain_score:27.2 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:5.8e-06 score:24.5 best_domain_score:14.7 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:2e-06 score:27.2 best_domain_score:18.7 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:4.3e-22 score:77.7 best_domain_score:72.6 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.2e-57 score:194.6 best_domain_score:193.8 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:4e-09 score:35.4 best_domain_score:25.7 name:Pyr_redox_3; db:Pfam-A.hmm|PF02852.22 evalue:1.9e-28 score:98.2 best_domain_score:97.5 name:Pyr_redox_dim; db:Pfam-A.hmm|PF09335.11 evalue:4.3e-23 score:81.3 best_domain_score:81.3 name:SNARE_assoc;
tm_num 7;
103693 101549 transmembrane_helix
ID metaerg.pl|01056
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i101573-101641o101708-101776i101795-101863o101954-102022i102041-102097o102140-102208i102269-102328o;
103815 104918 CDS
ID metaerg.pl|01057
allec_ids 3.6.-.-;
allgo_ids GO:0005829; GO:0005525; GO:0003924; GO:0042802; GO:0046914; GO:0006974;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiohalocapsa;s__Thiohalocapsa sp001469165;
genomedb_acc GCF_001469165.1;
genomedb_target db:genomedb|GCF_001469165.1|WP_058555143.1 11 366 evalue:2.0e-113 qcov:97.00 identity:57.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF02492; PF07683;
pfam_desc CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain;
pfam_id cobW; CobW_C;
pfam_target db:Pfam-A.hmm|PF02492.19 evalue:6.2e-46 score:155.4 best_domain_score:155.1 name:cobW; db:Pfam-A.hmm|PF07683.14 evalue:6.5e-19 score:66.9 best_domain_score:63.0 name:CobW_C;
sprot_desc P-loop guanosine triphosphatase YjiA;
sprot_id sp|P24203|YJIA_ECOLI;
sprot_target db:uniprot_sprot|sp|P24203|YJIA_ECOLI 10 353 evalue:9.0e-36 qcov:93.70 identity:31.70;
104986 107205 CDS
ID metaerg.pl|01058
allgo_ids GO:0009279; GO:0016021;
allko_ids K02014;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__Methylophaga;s__Methylophaga muralis;
genomedb_acc GCF_001720165.1;
genomedb_target db:genomedb|GCF_001720165.1|WP_069296378.1 2 737 evalue:3.8e-212 qcov:99.60 identity:52.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF07715; PF00593;
pfam_desc TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:5.5e-20 score:71.2 best_domain_score:70.1 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:7.4e-28 score:97.9 best_domain_score:96.4 name:TonB_dep_Rec;
sp YES;
sprot_desc Probable TonB-dependent receptor NMB0964;
sprot_id sp|Q9JZN9|Y964_NEIMB;
sprot_target db:uniprot_sprot|sp|Q9JZN9|Y964_NEIMB 1 735 evalue:5.1e-62 qcov:99.50 identity:26.20;
104986 105063 signal_peptide
ID metaerg.pl|01059
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
108038 107220 CDS
ID metaerg.pl|01060
allec_ids 2.1.1.297; 2.1.1.-;
allgo_ids GO:0008168; GO:0003676; GO:0102559; GO:0036009; GO:0018364;
allko_ids K02493; K00599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL39594.1 4 270 evalue:2.2e-77 qcov:98.20 identity:58.40;
kegg_pathway_id 00350; 00150; 00380; 00340; 00450; 00860; 00626;
kegg_pathway_name Tyrosine metabolism; Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism; Selenoamino acid metabolism; Porphyrin and chlorophyll metabolism; Naphthalene and anthracene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-6519; PWY-5773; PWY-5328; METHIONINE-DEG1-PWY; PWY-5116; PWY-1581; CO2FORM-PWY; PWY-6292; PWY-5479; PWY-5987; PWY-6427; PWY-6395; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-5857; PWY-6303; PWY-6151; PWY-5855; PWY-5209; PWY-6424; PWY-6154; UBISYN-PWY; PWY-6142; PWY-5856; METH-ACETATE-PWY; PWY-5864; PWY-5975; PWY-5876; PWY-1061; PWY-1422; PWY-5729; PWY-6113; PWY-5305; PWYG-321; CODH-PWY; PWY-6575; PWY-6442; PWY-6477; PWY-5467; PWY-6153; PWY-3542; ALL-CHORISMATE-PWY; PWY-4021; PWY-5041;
metacyc_pathway_name 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; xanthohumol biosynthesis;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; S-adenosyl-L-methionine cycle I;; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; ; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; methanogenesis from acetate;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; magnoflorine biosynthesis;; homogalacturonan biosynthesis;; vitamin E biosynthesis (tocopherols);; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; gibberellin inactivation II (methylation);; gramine biosynthesis;; autoinducer AI-2 biosynthesis I;; choline biosynthesis II;; superpathway of chorismate metabolism;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;;
metacyc_pathway_type 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; ; Autoinducer-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Autotrophic-CO2-Fixation;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; Autoinducer-Biosynthesis;; Choline-Biosynthesis;; Super-Pathways;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;;
pfam_acc PF05971; PF08241; PF08242; PF13649; PF13847; PF02390; PF05175; PF06325; PF17827;
pfam_desc RNA methyltransferase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Putative methyltransferase ; Methyltransferase small domain; Ribosomal protein L11 methyltransferase (PrmA); PrmC N-terminal domain;
pfam_id Methyltransf_10; Methyltransf_11; Methyltransf_12; Methyltransf_25; Methyltransf_31; Methyltransf_4; MTS; PrmA; PrmC_N;
pfam_target db:Pfam-A.hmm|PF05971.12 evalue:8e-06 score:24.6 best_domain_score:23.8 name:Methyltransf_10; db:Pfam-A.hmm|PF08241.12 evalue:2.5e-07 score:30.5 best_domain_score:28.8 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:2.2e-07 score:30.8 best_domain_score:27.6 name:Methyltransf_12; db:Pfam-A.hmm|PF13649.6 evalue:1.8e-08 score:34.2 best_domain_score:32.8 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:2.9e-13 score:49.1 best_domain_score:48.5 name:Methyltransf_31; db:Pfam-A.hmm|PF02390.17 evalue:1.4e-05 score:23.9 best_domain_score:22.7 name:Methyltransf_4; db:Pfam-A.hmm|PF05175.14 evalue:9.5e-19 score:66.8 best_domain_score:60.8 name:MTS; db:Pfam-A.hmm|PF06325.13 evalue:1.6e-07 score:30.3 best_domain_score:28.9 name:PrmA; db:Pfam-A.hmm|PF17827.1 evalue:1.5e-14 score:53.6 best_domain_score:53.5 name:PrmC_N;
sprot_desc Release factor glutamine methyltransferase;
sprot_id sp|Q87DF7|PRMC_XYLFT;
sprot_target db:uniprot_sprot|sp|Q87DF7|PRMC_XYLFT 1 272 evalue:2.1e-58 qcov:100.00 identity:48.00;
tigrfam_acc TIGR00536; TIGR03534;
tigrfam_desc methyltransferase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific;
tigrfam_mainrole Protein fate; Protein fate;
tigrfam_name hemK_fam; RF_mod_PrmC;
tigrfam_sub1role Protein modification and repair; Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00536 evalue:3e-76 score:255.4 best_domain_score:255.3 name:TIGR00536; db:TIGRFAMs.hmm|TIGR03534 evalue:4.3e-89 score:297.4 best_domain_score:297.3 name:TIGR03534;
108148 108073 tRNA
ID metaerg.pl|01061
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
name tRNA_Phe_gaa;
108309 108743 CDS
ID metaerg.pl|01062
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725608.1 1 138 evalue:2.5e-19 qcov:95.80 identity:39.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
sp YES;
108309 108356 lipoprotein_signal_peptide
ID metaerg.pl|01063
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
109025 108750 CDS
ID metaerg.pl|01064
allgo_ids GO:0005506;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725607.1 1 91 evalue:7.9e-35 qcov:100.00 identity:74.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF04362;
pfam_desc Bacterial Fe(2+) trafficking;
pfam_id Iron_traffic;
pfam_target db:Pfam-A.hmm|PF04362.14 evalue:4.5e-41 score:137.7 best_domain_score:137.5 name:Iron_traffic;
sprot_desc Probable Fe(2+)-trafficking protein;
sprot_id sp|Q2SXI2|FETP_BURTA;
sprot_target db:uniprot_sprot|sp|Q2SXI2|FETP_BURTA 1 91 evalue:2.6e-29 qcov:100.00 identity:62.60;
110128 109085 CDS
ID metaerg.pl|01065
allec_ids 3.2.2.31; 3.2.2.-;
allgo_ids GO:0003677; GO:0051539; GO:0019104; GO:0016787; GO:0046872; GO:0006284;
allko_ids K10773; K03575; K10801; K03660;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725603.1 15 346 evalue:5.3e-116 qcov:95.70 identity:59.10;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-5381; PWY-2681;
metacyc_pathway_name pyridine nucleotide cycling (plants);; trans-zeatin biosynthesis;;
metacyc_pathway_type NAD-Metabolism;; CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF00633; PF00730; PF14815;
pfam_desc Helix-hairpin-helix motif; HhH-GPD superfamily base excision DNA repair protein; NUDIX domain;
pfam_id HHH; HhH-GPD; NUDIX_4;
pfam_target db:Pfam-A.hmm|PF00633.23 evalue:4.6e-07 score:28.6 best_domain_score:27.4 name:HHH; db:Pfam-A.hmm|PF00730.25 evalue:1.9e-17 score:62.9 best_domain_score:62.2 name:HhH-GPD; db:Pfam-A.hmm|PF14815.6 evalue:7.3e-21 score:73.5 best_domain_score:72.4 name:NUDIX_4;
sprot_desc Adenine DNA glycosylase;
sprot_id sp|P17802|MUTY_ECOLI;
sprot_target db:uniprot_sprot|sp|P17802|MUTY_ECOLI 16 346 evalue:1.2e-74 qcov:95.40 identity:43.80;
tigrfam_acc TIGR01084;
tigrfam_desc A/G-specific adenine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutY;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01084 evalue:3.5e-102 score:340.8 best_domain_score:340.5 name:TIGR01084;
111117 110125 CDS
ID metaerg.pl|01066
allgo_ids GO:0005525; GO:0006614; GO:0005737; GO:0031226; GO:0016020; GO:0005886; GO:0003924; GO:0005047; GO:0006605;
allko_ids K03110;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725602.1 1 328 evalue:1.2e-157 qcov:99.40 identity:87.80;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00448; PF02881; PF06414;
pfam_desc SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Zeta toxin;
pfam_id SRP54; SRP54_N; Zeta_toxin;
pfam_target db:Pfam-A.hmm|PF00448.22 evalue:1.7e-76 score:255.5 best_domain_score:255.1 name:SRP54; db:Pfam-A.hmm|PF02881.19 evalue:4.6e-12 score:45.2 best_domain_score:43.9 name:SRP54_N; db:Pfam-A.hmm|PF06414.12 evalue:5.6e-06 score:25.0 best_domain_score:24.3 name:Zeta_toxin;
sprot_desc Signal recognition particle receptor FtsY;
sprot_id sp|P44870|FTSY_HAEIN;
sprot_target db:uniprot_sprot|sp|P44870|FTSY_HAEIN 17 329 evalue:1.5e-90 qcov:94.80 identity:55.30;
tigrfam_acc TIGR00064;
tigrfam_desc signal recognition particle-docking protein FtsY;
tigrfam_mainrole Protein fate;
tigrfam_name ftsY;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00064 evalue:2.7e-107 score:357.3 best_domain_score:357.1 name:TIGR00064;
111210 111791 CDS
ID metaerg.pl|01067
allec_ids 2.1.1.171;
allgo_ids GO:0008168; GO:0052913; GO:0003676;
allko_ids K08316;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38306.1 1 184 evalue:2.9e-47 qcov:95.30 identity:52.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF03602; PF05175;
pfam_desc Conserved hypothetical protein 95; Methyltransferase small domain;
pfam_id Cons_hypoth95; MTS;
pfam_target db:Pfam-A.hmm|PF03602.15 evalue:2.2e-49 score:166.8 best_domain_score:166.6 name:Cons_hypoth95; db:Pfam-A.hmm|PF05175.14 evalue:1.3e-06 score:27.3 best_domain_score:26.8 name:MTS;
sprot_desc Ribosomal RNA small subunit methyltransferase D;
sprot_id sp|P0ADY0|RSMD_ECOL6;
sprot_target db:uniprot_sprot|sp|P0ADY0|RSMD_ECOL6 2 185 evalue:9.5e-37 qcov:95.30 identity:49.50;
tigrfam_acc TIGR00095;
tigrfam_desc 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00095;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00095 evalue:1.2e-45 score:154.7 best_domain_score:154.5 name:TIGR00095;
111821 112321 CDS
ID metaerg.pl|01068
allec_ids 2.7.7.3;
allgo_ids GO:0003824; GO:0009058; GO:0005737; GO:0005524; GO:0004595; GO:0015937;
allko_ids K00954;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725600.1 1 165 evalue:8.1e-70 qcov:99.40 identity:82.40;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-4242; PANTOSYN-PWY; PWY-4221; COA-PWY;
metacyc_pathway_name ; superpathway of coenzyme A biosynthesis I (bacteria);; superpathway of coenzyme A biosynthesis II (plants);; coenzyme A biosynthesis I (prokaryotic);;
metacyc_pathway_type ; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis;;
pfam_acc PF01467;
pfam_desc Cytidylyltransferase-like;
pfam_id CTP_transf_like;
pfam_target db:Pfam-A.hmm|PF01467.26 evalue:7.4e-21 score:74.1 best_domain_score:73.8 name:CTP_transf_like;
sprot_desc Phosphopantetheine adenylyltransferase;
sprot_id sp|Q9PEP8|COAD_XYLFA;
sprot_target db:uniprot_sprot|sp|Q9PEP8|COAD_XYLFA 8 164 evalue:5.7e-54 qcov:94.60 identity:66.90;
tigrfam_acc TIGR00125; TIGR01510;
tigrfam_desc cytidyltransferase-like domain; pantetheine-phosphate adenylyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cyt_tran_rel; coaD_prev_kdtB;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00125 evalue:4.9e-15 score:54.6 best_domain_score:52.9 name:TIGR00125; db:TIGRFAMs.hmm|TIGR01510 evalue:6.4e-55 score:184.6 best_domain_score:184.4 name:TIGR01510;
112348 114168 CDS
ID metaerg.pl|01069
allec_ids 3.4.19.13; 2.3.2.2;
allgo_ids GO:0042597; GO:0036374; GO:0102953; GO:0103068; GO:0006750; GO:0006751;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725599.1 61 600 evalue:2.4e-241 qcov:89.10 identity:77.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-5826; PWY-4041;
metacyc_pathway_name hypoglycin biosynthesis;; γ-glutamyl cycle;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; Reductants; Super-Pathways;;
pfam_acc PF01019;
pfam_desc Gamma-glutamyltranspeptidase;
pfam_id G_glu_transpept;
pfam_target db:Pfam-A.hmm|PF01019.21 evalue:3.4e-166 score:553.2 best_domain_score:553.0 name:G_glu_transpept;
sp YES;
sprot_desc Glutathione hydrolase proenzyme;
sprot_id sp|P36267|GGT_PSEUA;
sprot_target db:uniprot_sprot|sp|P36267|GGT_PSEUA 71 594 evalue:1.3e-108 qcov:86.50 identity:44.10;
tigrfam_acc TIGR00066;
tigrfam_desc gamma-glutamyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name g_glut_trans;
tigrfam_sub1role Glutathione and analogs;
tigrfam_target db:TIGRFAMs.hmm|TIGR00066 evalue:9e-145 score:482.2 best_domain_score:481.9 name:TIGR00066;
112348 112536 signal_peptide
ID metaerg.pl|01070
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
114283 114546 CDS
ID metaerg.pl|01071
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02959;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725596.1 1 85 evalue:2.8e-37 qcov:97.70 identity:90.60;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00886;
pfam_desc Ribosomal protein S16;
pfam_id Ribosomal_S16;
pfam_target db:Pfam-A.hmm|PF00886.19 evalue:9.2e-25 score:85.7 best_domain_score:85.3 name:Ribosomal_S16;
sprot_desc 30S ribosomal protein S16;
sprot_id sp|A1S3Z0|RS16_SHEAM;
sprot_target db:uniprot_sprot|sp|A1S3Z0|RS16_SHEAM 1 81 evalue:1.3e-28 qcov:93.10 identity:70.40;
tigrfam_acc TIGR00002;
tigrfam_desc ribosomal protein bS16;
tigrfam_mainrole Protein synthesis;
tigrfam_name S16;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00002 evalue:1.6e-29 score:100.9 best_domain_score:100.7 name:TIGR00002;
114546 115091 CDS
ID metaerg.pl|01072
allgo_ids GO:0006364; GO:0005840; GO:0043022; GO:0042274;
allko_ids K02860;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725595.1 1 174 evalue:2.1e-55 qcov:96.10 identity:58.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF05239; PF01782;
pfam_desc PRC-barrel domain; RimM N-terminal domain;
pfam_id PRC; RimM;
pfam_target db:Pfam-A.hmm|PF05239.16 evalue:2.4e-09 score:36.4 best_domain_score:35.5 name:PRC; db:Pfam-A.hmm|PF01782.18 evalue:1.9e-20 score:72.1 best_domain_score:71.6 name:RimM;
sprot_desc Ribosome maturation factor RimM;
sprot_id sp|Q3J8X9|RIMM_NITOC;
sprot_target db:uniprot_sprot|sp|Q3J8X9|RIMM_NITOC 4 168 evalue:1.2e-36 qcov:91.20 identity:44.60;
tigrfam_acc TIGR02273;
tigrfam_desc 16S rRNA processing protein RimM;
tigrfam_mainrole Transcription;
tigrfam_name 16S_RimM;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR02273 evalue:7.1e-45 score:151.6 best_domain_score:151.4 name:TIGR02273;
115075 115851 CDS
ID metaerg.pl|01073
allec_ids 2.1.1.228;
allgo_ids GO:0005737; GO:0052906;
allko_ids K00554;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725594.1 2 245 evalue:2.1e-101 qcov:94.60 identity:70.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01746;
pfam_desc tRNA (Guanine-1)-methyltransferase;
pfam_id tRNA_m1G_MT;
pfam_target db:Pfam-A.hmm|PF01746.21 evalue:2.1e-64 score:216.0 best_domain_score:215.8 name:tRNA_m1G_MT;
sprot_desc tRNA (guanine-N(1)-)-methyltransferase;
sprot_id sp|A7MEG4|TRMD_CROS8;
sprot_target db:uniprot_sprot|sp|A7MEG4|TRMD_CROS8 5 253 evalue:3.5e-79 qcov:96.50 identity:57.20;
tigrfam_acc TIGR00088;
tigrfam_desc tRNA (guanine(37)-N(1))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name trmD;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00088 evalue:2.9e-90 score:300.8 best_domain_score:300.5 name:TIGR00088;
115910 116269 CDS
ID metaerg.pl|01074
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02884;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725593.1 1 119 evalue:8.7e-50 qcov:100.00 identity:86.60;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01245;
pfam_desc Ribosomal protein L19;
pfam_id Ribosomal_L19;
pfam_target db:Pfam-A.hmm|PF01245.20 evalue:1.2e-48 score:162.9 best_domain_score:162.7 name:Ribosomal_L19;
sprot_desc 50S ribosomal protein L19;
sprot_id sp|C1DSZ9|RL19_AZOVD;
sprot_target db:uniprot_sprot|sp|C1DSZ9|RL19_AZOVD 1 115 evalue:6.7e-41 qcov:96.60 identity:75.00;
tigrfam_acc TIGR01024;
tigrfam_desc ribosomal protein bL19;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplS_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01024 evalue:4.5e-48 score:161.3 best_domain_score:161.1 name:TIGR01024;
116342 116812 CDS
ID metaerg.pl|01075
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725592.1 1 149 evalue:5.1e-50 qcov:95.50 identity:62.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF14539;
pfam_desc Domain of unknown function (DUF4442);
pfam_id DUF4442;
pfam_target db:Pfam-A.hmm|PF14539.6 evalue:7.6e-22 score:77.1 best_domain_score:76.9 name:DUF4442;
117073 116846 CDS
ID metaerg.pl|01076
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Spongiibacteraceae;g__UBA5047;s__UBA5047 sp002415025;
genomedb_acc GCA_002415025.1;
genomedb_target db:genomedb|GCA_002415025.1|DIBR01000065.1_52 1 57 evalue:6.5e-11 qcov:76.00 identity:64.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF04519;
pfam_desc Polymer-forming cytoskeletal;
pfam_id Bactofilin;
pfam_target db:Pfam-A.hmm|PF04519.13 evalue:2.1e-09 score:36.8 best_domain_score:36.5 name:Bactofilin;
118137 117184 CDS
ID metaerg.pl|01077
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169567.1 1 317 evalue:9.8e-133 qcov:100.00 identity:75.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:2e-31 score:107.3 best_domain_score:106.3 name:Peptidase_M23;
tm_num 1;
118137 117184 transmembrane_helix
ID metaerg.pl|01078
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i117265-117333o;
118486 120405 CDS
ID metaerg.pl|01079
allgo_ids GO:0005524; GO:0006457; GO:0051082; GO:0005737;
allko_ids K04079;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725589.1 1 637 evalue:5.0e-269 qcov:99.70 identity:74.20;
kegg_pathway_id 04612;
kegg_pathway_name Antigen processing and presentation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF02518; PF13589; PF00183;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein;
pfam_id HATPase_c; HATPase_c_3; HSP90;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:3.2e-11 score:43.0 best_domain_score:42.2 name:HATPase_c; db:Pfam-A.hmm|PF13589.6 evalue:3.1e-13 score:48.9 best_domain_score:48.2 name:HATPase_c_3; db:Pfam-A.hmm|PF00183.18 evalue:1.9e-116 score:389.2 best_domain_score:380.3 name:HSP90;
sprot_desc Chaperone protein HtpG;
sprot_id sp|Q21IX0|HTPG_SACD2;
sprot_target db:uniprot_sprot|sp|Q21IX0|HTPG_SACD2 1 618 evalue:6.1e-189 qcov:96.70 identity:53.20;
120389 121222 CDS
ID metaerg.pl|01080
allgo_ids GO:0005216; GO:0006811; GO:0016020; GO:0055085; GO:0005737; GO:0005886; GO:0005891; GO:0008332; GO:0097110; GO:0086056; GO:0086059; GO:0086016; GO:0086027; GO:0070509; GO:0070588; GO:0086002; GO:0007268; GO:0086010; GO:0086045; GO:0086046; GO:0019228; GO:0045956; GO:0060371; GO:0086091; GO:0034765; GO:0042391; GO:0010045; GO:0086015; GO:0086018;
allko_ids K04854;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169566.1 3 275 evalue:5.2e-106 qcov:98.60 identity:75.90;
kegg_pathway_id 04010; 04020;
kegg_pathway_name MAPK signaling pathway; Calcium signaling pathway;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00520; PF08016;
pfam_desc Ion transport protein; Polycystin cation channel;
pfam_id Ion_trans; PKD_channel;
pfam_target db:Pfam-A.hmm|PF00520.31 evalue:8.2e-45 score:152.2 best_domain_score:151.8 name:Ion_trans; db:Pfam-A.hmm|PF08016.12 evalue:1e-11 score:43.4 best_domain_score:35.9 name:PKD_channel;
sprot_desc Voltage-dependent T-type calcium channel subunit alpha-1G;
sprot_id sp|O43497|CAC1G_HUMAN;
sprot_target db:uniprot_sprot|sp|O43497|CAC1G_HUMAN 30 234 evalue:2.3e-07 qcov:74.00 identity:28.60;
tm_num 5;
120389 121222 transmembrane_helix
ID metaerg.pl|01081
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology o120473-120532i120551-120619o120662-120730i120827-120895o121013-121081i;
121215 121598 CDS
ID metaerg.pl|01082
allgo_ids GO:0003723; GO:0003677; GO:0043023; GO:0003727; GO:0034605;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Salinisphaeraceae;g__Salinisphaera;s__Salinisphaera hydrothermalis;
genomedb_acc GCF_000732535.1;
genomedb_target db:genomedb|GCF_000732535.1|WP_037333143.1 4 124 evalue:5.8e-28 qcov:95.30 identity:57.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01479;
pfam_desc S4 domain;
pfam_id S4;
pfam_target db:Pfam-A.hmm|PF01479.25 evalue:3e-14 score:51.7 best_domain_score:51.0 name:S4;
sprot_desc Heat shock protein 15 homolog;
sprot_id sp|Q44264|HSLR_AERSA;
sprot_target db:uniprot_sprot|sp|Q44264|HSLR_AERSA 2 125 evalue:2.3e-23 qcov:97.60 identity:50.00;
125189 121773 CDS
ID metaerg.pl|01083
allec_ids 2.7.7.7;
allgo_ids GO:0006260; GO:0008408; GO:0005737; GO:0003887; GO:0003676;
allko_ids K14162; K03763; K02337; K02323;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725587.1 2 1138 evalue:0.0e+00 qcov:99.90 identity:82.00;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF07733; PF17657; PF14579; PF02811; PF01336;
pfam_desc Bacterial DNA polymerase III alpha NTPase domain; Bacterial DNA polymerase III alpha subunit finger domain; Helix-hairpin-helix motif; PHP domain; OB-fold nucleic acid binding domain;
pfam_id DNA_pol3_alpha; DNA_pol3_finger; HHH_6; PHP; tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF07733.12 evalue:1e-101 score:339.1 best_domain_score:338.5 name:DNA_pol3_alpha; db:Pfam-A.hmm|PF17657.1 evalue:2.8e-65 score:217.9 best_domain_score:217.3 name:DNA_pol3_finger; db:Pfam-A.hmm|PF14579.6 evalue:2e-27 score:94.5 best_domain_score:92.9 name:HHH_6; db:Pfam-A.hmm|PF02811.19 evalue:3.8e-29 score:101.4 best_domain_score:100.3 name:PHP; db:Pfam-A.hmm|PF01336.25 evalue:2e-09 score:36.5 best_domain_score:35.5 name:tRNA_anti-codon;
sprot_desc DNA polymerase III subunit alpha;
sprot_id sp|P14567|DPO3A_SALTY;
sprot_target db:uniprot_sprot|sp|P14567|DPO3A_SALTY 7 1138 evalue:0.0e+00 qcov:99.50 identity:50.70;
tigrfam_acc TIGR00594;
tigrfam_desc DNA polymerase III, alpha subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name polc;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00594 evalue:0 score:1197.9 best_domain_score:1197.7 name:TIGR00594;
127980 125290 CDS
ID metaerg.pl|01084
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725585.1 1 895 evalue:1.1e-229 qcov:99.90 identity:51.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF03993;
pfam_desc Domain of Unknown Function (DUF349);
pfam_id DUF349;
pfam_target db:Pfam-A.hmm|PF03993.12 evalue:1.1e-18 score:66.5 best_domain_score:32.5 name:DUF349;
128527 128054 CDS
ID metaerg.pl|01085
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__PGZG01;s__PGZG01 sp002840115;
genomedb_acc GCA_002840115.1;
genomedb_target db:genomedb|GCA_002840115.1|PKM21637.1 1 156 evalue:4.6e-59 qcov:99.40 identity:71.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF14539;
pfam_desc Domain of unknown function (DUF4442);
pfam_id DUF4442;
pfam_target db:Pfam-A.hmm|PF14539.6 evalue:2.9e-51 score:172.3 best_domain_score:172.1 name:DUF4442;
128674 130143 CDS
ID metaerg.pl|01086
allgo_ids GO:0016021; GO:0005886; GO:0015297; GO:0006814;
allko_ids K03315;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Idiomarina;s__Idiomarina maris;
genomedb_acc GCF_003259445.1;
genomedb_target db:genomedb|GCF_003259445.1|WP_111569033.1 1 483 evalue:4.9e-184 qcov:98.80 identity:70.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF03553;
pfam_desc Na+/H+ antiporter family;
pfam_id Na_H_antiporter;
pfam_target db:Pfam-A.hmm|PF03553.14 evalue:2.1e-53 score:180.8 best_domain_score:173.3 name:Na_H_antiporter;
sprot_desc Malate-2H(+)/Na(+)-lactate antiporter;
sprot_id sp|P54571|MLEN_BACSU;
sprot_target db:uniprot_sprot|sp|P54571|MLEN_BACSU 57 467 evalue:1.8e-60 qcov:84.00 identity:34.20;
tigrfam_acc TIGR00931;
tigrfam_desc Na+/H+ antiporter NhaC;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name antiport_nhaC;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR00931 evalue:1.8e-127 score:425.0 best_domain_score:424.8 name:TIGR00931;
tm_num 12;
128674 130143 transmembrane_helix
ID metaerg.pl|01087
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i128710-128769o128797-128853i128890-128958o129016-129075i129094-129162o129259-129327i129385-129444o129454-129513i129550-129606o129664-129732i129769-129828o130009-130077i;
130554 130219 CDS
ID metaerg.pl|01088
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Algoriphagus;s__Algoriphagus resistens;
genomedb_acc GCF_001442615.1;
genomedb_target db:genomedb|GCF_001442615.1|WP_057938204.1 1 108 evalue:9.3e-22 qcov:97.30 identity:53.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF09685;
pfam_desc Domain of unknown function (DUF4870);
pfam_id DUF4870;
pfam_target db:Pfam-A.hmm|PF09685.10 evalue:2.6e-05 score:23.5 best_domain_score:23.3 name:DUF4870;
tm_num 3;
130554 130219 transmembrane_helix
ID metaerg.pl|01089
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology o130231-130287i130345-130404o130414-130482i;
130746 131159 CDS
ID metaerg.pl|01090
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
tm_num 4;
130746 131159 transmembrane_helix
ID metaerg.pl|01091
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i130764-130823o130893-130961i130980-131048o131076-131135i;
131343 131930 CDS
ID metaerg.pl|01092
allgo_ids GO:0003700; GO:0006352; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37105.1 13 195 evalue:6.8e-52 qcov:93.80 identity:58.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF04542; PF04545; PF08281;
pfam_desc Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF04542.14 evalue:1.8e-11 score:42.9 best_domain_score:42.2 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:1e-07 score:30.6 best_domain_score:29.5 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:4.9e-16 score:57.4 best_domain_score:56.7 name:Sigma70_r4_2;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:2.7e-17 score:62.0 best_domain_score:60.4 name:TIGR02937;
131927 132406 CDS
ID metaerg.pl|01093
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37106.1 3 145 evalue:8.6e-21 qcov:89.90 identity:46.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
tm_num 1;
131927 132406 transmembrane_helix
ID metaerg.pl|01094
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i132050-132118o;
132409 133305 CDS
ID metaerg.pl|01095
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37107.1 1 298 evalue:8.2e-57 qcov:100.00 identity:42.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF13349;
pfam_desc Putative adhesin;
pfam_id DUF4097;
pfam_target db:Pfam-A.hmm|PF13349.6 evalue:6.5e-20 score:70.8 best_domain_score:67.2 name:DUF4097;
sp YES;
132409 132468 signal_peptide
ID metaerg.pl|01096
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
133454 133864 CDS
ID metaerg.pl|01097
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5704;f__UBA5704;g__UBA5704;s__UBA5704 sp002420005;
genomedb_acc GCA_002420005.1;
genomedb_target db:genomedb|GCA_002420005.1|DIHE01000049.1_54 9 136 evalue:1.7e-33 qcov:94.10 identity:50.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF08695;
pfam_desc Cytochrome oxidase complex assembly protein 1;
pfam_id Coa1;
pfam_target db:Pfam-A.hmm|PF08695.10 evalue:1.3e-21 score:75.7 best_domain_score:75.5 name:Coa1;
tm_num 1;
133454 133864 transmembrane_helix
ID metaerg.pl|01098
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology o133511-133579i;
136320 133909 CDS
ID metaerg.pl|01099
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5704;f__UBA5704;g__UBA5704;s__UBA5704 sp002420005;
genomedb_acc GCA_002420005.1;
genomedb_target db:genomedb|GCA_002420005.1|DIHE01000115.1_16 23 787 evalue:2.0e-129 qcov:95.30 identity:37.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
tm_num 5;
136320 133909 transmembrane_helix
ID metaerg.pl|01100
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i134047-134115o134125-134193i134212-134280o134290-134358i134377-134445o;
136626 137195 CDS
ID metaerg.pl|01101
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pararheinheimera;s__Pararheinheimera sp000217935;
genomedb_acc GCF_000217935.1;
genomedb_target db:genomedb|GCF_000217935.1|WP_050801185.1 21 183 evalue:6.9e-33 qcov:86.20 identity:42.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
sp YES;
tm_num 1;
136626 136697 signal_peptide
ID metaerg.pl|01102
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
136626 137195 transmembrane_helix
ID metaerg.pl|01103
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i136644-136700o;
137348 141574 CDS
ID metaerg.pl|01104
allgo_ids GO:0016491; GO:0055114;
allko_ids K00428;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726771.1 10 1400 evalue:0.0e+00 qcov:98.80 identity:63.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF13205; PF03150; PF00801;
pfam_desc Bacterial Ig-like domain; Di-haem cytochrome c peroxidase; PKD domain;
pfam_id Big_5; CCP_MauG; PKD;
pfam_target db:Pfam-A.hmm|PF13205.6 evalue:2.4e-11 score:43.5 best_domain_score:42.0 name:Big_5; db:Pfam-A.hmm|PF03150.14 evalue:5.5e-06 score:26.3 best_domain_score:13.1 name:CCP_MauG; db:Pfam-A.hmm|PF00801.20 evalue:6.1e-07 score:28.4 best_domain_score:27.0 name:PKD;
sp YES;
137348 137416 signal_peptide
ID metaerg.pl|01105
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
141840 142628 CDS
ID metaerg.pl|01106
allec_ids 3.5.2.6;
allgo_ids GO:0008658; GO:0008800; GO:0017001; GO:0046677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thiorhodospira;s__Thiorhodospira sibirica;
genomedb_acc GCF_000227725.1;
genomedb_target db:genomedb|GCF_000227725.1|WP_006786917.1 1 262 evalue:2.3e-103 qcov:100.00 identity:66.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00905;
pfam_desc Penicillin binding protein transpeptidase domain;
pfam_id Transpeptidase;
pfam_target db:Pfam-A.hmm|PF00905.22 evalue:3.9e-33 score:114.2 best_domain_score:113.7 name:Transpeptidase;
sp YES;
sprot_desc Beta-lactamase OXA-2;
sprot_id sp|P0A1V9|BLO2_ECOLX;
sprot_target db:uniprot_sprot|sp|P0A1V9|BLO2_ECOLX 23 260 evalue:2.2e-100 qcov:90.80 identity:69.30;
141840 141902 signal_peptide
ID metaerg.pl|01107
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
142786 142971 CDS
ID metaerg.pl|01108
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
tm_num 2;
142786 142971 transmembrane_helix
ID metaerg.pl|01109
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i142843-142896o142906-142959i;
151651 143165 CDS
ID metaerg.pl|01110
allec_ids 2.4.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0030246; GO:0016757; GO:0005975; GO:0009877;
allko_ids K00702; K13688;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__Microbulbifer;s__Microbulbifer thermotolerans;
genomedb_acc GCF_900112305.1;
genomedb_target db:genomedb|GCF_900112305.1|WP_083421063.1 26 2816 evalue:0.0e+00 qcov:98.70 identity:48.00;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-5759; PWY-5286; PWY-5774; PWY-5339; PWY-5398; PWY-5926; PWY-2021; PWY-5797; PWY-5672; PWY-4421; PWY-6397; PWY-5666; PWY-5800; PWY-5161; PWY-5139; PWY-5160; PWY-5756; PWY-5272; PWY-5284; ECASYN-PWY; PWY-5784; PWY-83; PWY-5379; PWY-5268; PWY-881; PWY-5313; PWY-5380; PWY-5397; PWY-2901; PWY-6404; PWY-5793; PWY-5400; PWY-5338; PWY-6297; PWY-2881; PWY-5343; PWY-5342; PWY-5405; PWY-5399; PWY-5307;
metacyc_pathway_name saponin biosynthesis III;; anthocyanidin sophoroside metabolism;; saponin biosynthesis IV;; chalcone 2'-O-glucoside biosynthesis;; crocetin esters biosynthesis;; afrormosin conjugates interconversion;; indole-3-acetate inactivation IV;; indole-3-acetate inactivation VI;; ginsenosides biosynthesis;; curcumin glucoside biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; α-solanine/α-chaconine biosynthesis;; xylan biosynthesis;; 6'-deoxychalcone metabolism;; pelargonidin conjugates biosynthesis;; rose anthocyanin biosynthesis I (via cyanidin 5-O-β-D-glucoside);; saponin biosynthesis II;; abscisic acid degradation by glucosylation;; shisonin biosynthesis;; enterobacterial common antigen biosynthesis;; indole-3-acetate inactivation VIII;; monolignol glucosides biosynthesis;; B series fagopyritols biosynthesis;; salvianin biosynthesis;; trehalose biosynthesis II;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; A series fagopyritols biosynthesis;; crocetin biosynthesis;; cytokinins 9-N-glucoside biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; maysin biosynthesis;; amaranthin biosynthesis;; galactosylcyclitol biosynthesis;; tuberonate glucoside biosynthesis;; cytokinins 7-N-glucoside biosynthesis;; ajugose biosynthesis II (galactinol-independent);; ajugose biosynthesis I (galactinol-dependent);; superpathway of betalain biosynthesis;; betacyanin biosynthesis;; gentiodelphin biosynthesis;;
metacyc_pathway_type TRITERPENOID-SYN;; ANTHOCYANIN-SYN; Metabolic-Clusters;; TRITERPENOID-SYN;; CHALCONE-SYN;; APOCAROTENOID-SYN;; ISOFLAVONOID-SYN; Interconversion;; Indole-3-Acetate-Inactivation;; Indole-3-Acetate-Inactivation;; TRITERPENOID-SYN;; PHENYLPROPANOID-SYN; POLYKETIDE-SYN;; Cell-Wall-Biosynthesis;; ALKALOIDS-SYN;; SECONDARY-CELL-WALL;; CHALCONE-SYN;; ANTHOCYANIN-SYN;; ANTHOCYANIN-SYN;; TRITERPENOID-SYN;; Abscisic-Acid-Degradation; Interconversion;; ANTHOCYANIN-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Indole-3-Acetate-Inactivation;; LIGNIN-SYN; Metabolic-Clusters;; CYCLITOLS-DEG; SUGAR-DERIVS;; ANTHOCYANIN-SYN;; Trehalose-biosynthesis;; ANTHOCYANIN-SYN; Super-Pathways;; CYCLITOLS-DEG; SUGAR-DERIVS;; APOCAROTENOID-SYN;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Cell-Wall-Biosynthesis; Super-Pathways;; FLAVONE-SYN;; BETALAIN-ALKALOIDS;; Cyclitols-Biosynthesis;; Inactivation;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; BETALAIN-ALKALOIDS;; ANTHOCYANIN-SYN;;
pfam_acc PF10091; PF17167; PF06165; PF13632;
pfam_desc Putative glucoamylase; Glycosyl hydrolase 36 superfamily, catalytic domain; Glycosyltransferase family 36; Glycosyl transferase family group 2;
pfam_id Glycoamylase; Glyco_hydro_36; Glyco_transf_36; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF10091.9 evalue:4.1e-16 score:58.5 best_domain_score:57.4 name:Glycoamylase; db:Pfam-A.hmm|PF17167.4 evalue:5e-108 score:360.7 best_domain_score:360.2 name:Glyco_hydro_36; db:Pfam-A.hmm|PF06165.11 evalue:4.3e-110 score:366.2 best_domain_score:221.2 name:Glyco_transf_36; db:Pfam-A.hmm|PF13632.6 evalue:1.3e-06 score:27.7 best_domain_score:27.7 name:Glyco_trans_2_3;
sprot_desc Cyclic beta-(1,2)-glucan synthase NdvB;
sprot_id sp|P20471|NDVB_RHIME;
sprot_target db:uniprot_sprot|sp|P20471|NDVB_RHIME 31 2778 evalue:0.0e+00 qcov:97.20 identity:33.70;
tm_num 6;
151651 143165 transmembrane_helix
ID metaerg.pl|01111
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology o143990-144043i144104-144172o144215-144283i145316-145372o145385-145453i145772-145840o;
152561 151659 CDS
ID metaerg.pl|01112
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__GCA-002840015;s__GCA-002840015 sp002840015;
genomedb_acc GCA_002840015.1;
genomedb_target db:genomedb|GCA_002840015.1|PKM15960.1 1 296 evalue:3.7e-49 qcov:98.70 identity:40.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.7e-38 score:131.5 best_domain_score:80.0 name:Usp;
153404 152664 CDS
ID metaerg.pl|01113
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725574.1 1 246 evalue:2.7e-106 qcov:100.00 identity:81.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
155551 153407 CDS
ID metaerg.pl|01114
allec_ids 1.17.4.1;
allgo_ids GO:0006260; GO:0055114; GO:0005524; GO:0004748; GO:0009263;
allko_ids K00525; K10807; K00527;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725573.1 1 714 evalue:0.0e+00 qcov:100.00 identity:89.10;
kegg_pathway_id 00240; 00230; 00480;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Glutathione metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6126; PRPP-PWY; PWY-6545; PWY-6125; PWY0-166;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; pyrimidine deoxyribonucleotides de novo biosynthesis III;; superpathway of guanosine nucleotides de novo biosynthesis II;; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF02867; PF00317;
pfam_desc Ribonucleotide reductase, barrel domain; Ribonucleotide reductase, all-alpha domain;
pfam_id Ribonuc_red_lgC; Ribonuc_red_lgN;
pfam_target db:Pfam-A.hmm|PF02867.15 evalue:6e-141 score:469.8 best_domain_score:469.5 name:Ribonuc_red_lgC; db:Pfam-A.hmm|PF00317.21 evalue:1.1e-07 score:31.0 best_domain_score:29.8 name:Ribonuc_red_lgN;
sprot_desc Ribonucleoside-diphosphate reductase large chain;
sprot_id sp|Q8SR37|RIR1_ENCCU;
sprot_target db:uniprot_sprot|sp|Q8SR37|RIR1_ENCCU 111 671 evalue:6.4e-30 qcov:78.60 identity:22.40;
tigrfam_acc TIGR02504;
tigrfam_desc ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name NrdJ_Z;
tigrfam_sub1role 2'-Deoxyribonucleotide metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR02504 evalue:3.9e-173 score:576.4 best_domain_score:576.1 name:TIGR02504;
155779 156243 CDS
ID metaerg.pl|01115
allec_ids 2.1.1.207;
allgo_ids GO:0003723; GO:0006396; GO:0008173; GO:0005737; GO:0008757; GO:0008175;
allko_ids K03216;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E sp003097135;
genomedb_acc GCA_003097135.1;
genomedb_target db:genomedb|GCA_003097135.1|PVZ10303.1 2 151 evalue:5.0e-50 qcov:97.40 identity:63.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00588;
pfam_desc SpoU rRNA Methylase family;
pfam_id SpoU_methylase;
pfam_target db:Pfam-A.hmm|PF00588.19 evalue:7.8e-30 score:103.1 best_domain_score:102.8 name:SpoU_methylase;
sprot_desc tRNA (cytidine(34)-2'-O)-methyltransferase;
sprot_id sp|C6X9I5|TRML_METGS;
sprot_target db:uniprot_sprot|sp|C6X9I5|TRML_METGS 2 151 evalue:1.8e-46 qcov:97.40 identity:55.30;
157267 156266 CDS
ID metaerg.pl|01116
allec_ids 1.1.1.94;
allgo_ids GO:0050661; GO:0009331; GO:0047952; GO:0004367; GO:0051287; GO:0005975; GO:0046167; GO:0046168; GO:0006650; GO:0008654;
allko_ids K00006; K00057;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725572.1 1 333 evalue:1.4e-145 qcov:100.00 identity:80.20;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-5667; PHOSLIPSYN2-PWY; PWY-5981; PWY4FS-7; PWY0-1319; PWY4FS-8; PHOSLIPSYN-PWY;
metacyc_pathway_name CDP-diacylglycerol biosynthesis I;; superpathway of phospholipid biosynthesis II (plants);; CDP-diacylglycerol biosynthesis III;; phosphatidylglycerol biosynthesis I (plastidic);; CDP-diacylglycerol biosynthesis II;; phosphatidylglycerol biosynthesis II (non-plastidic);; superpathway of phospholipid biosynthesis I (bacteria);;
metacyc_pathway_type CDP-diacylglycerol-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;;
pfam_acc PF02558; PF03807; PF03446; PF07479; PF01210;
pfam_desc Ketopantoate reductase PanE/ApbA; NADP oxidoreductase coenzyme F420-dependent; NAD binding domain of 6-phosphogluconate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus;
pfam_id ApbA; F420_oxidored; NAD_binding_2; NAD_Gly3P_dh_C; NAD_Gly3P_dh_N;
pfam_target db:Pfam-A.hmm|PF02558.16 evalue:4.6e-08 score:32.1 best_domain_score:31.1 name:ApbA; db:Pfam-A.hmm|PF03807.17 evalue:3.4e-06 score:26.8 best_domain_score:25.4 name:F420_oxidored; db:Pfam-A.hmm|PF03446.15 evalue:7.3e-05 score:22.2 best_domain_score:21.0 name:NAD_binding_2; db:Pfam-A.hmm|PF07479.14 evalue:6.1e-51 score:171.7 best_domain_score:171.0 name:NAD_Gly3P_dh_C; db:Pfam-A.hmm|PF01210.23 evalue:3.3e-48 score:162.9 best_domain_score:162.3 name:NAD_Gly3P_dh_N;
sprot_desc Glycerol-3-phosphate dehydrogenase [NAD(P)+];
sprot_id sp|B4SSF9|GPDA_STRM5;
sprot_target db:uniprot_sprot|sp|B4SSF9|GPDA_STRM5 5 331 evalue:2.3e-99 qcov:98.20 identity:56.60;
157770 157264 CDS
ID metaerg.pl|01117
allgo_ids GO:0015031; GO:0051082; GO:0051262; GO:0005737; GO:0006457;
allko_ids K03071;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725571.1 1 166 evalue:3.0e-64 qcov:98.80 identity:74.10;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF02556;
pfam_desc Preprotein translocase subunit SecB;
pfam_id SecB;
pfam_target db:Pfam-A.hmm|PF02556.14 evalue:1.7e-43 score:147.1 best_domain_score:146.8 name:SecB;
sprot_desc Protein-export protein SecB;
sprot_id sp|Q0A5H6|SECB_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0A5H6|SECB_ALKEH 1 159 evalue:1.2e-30 qcov:94.60 identity:41.60;
tigrfam_acc TIGR00809;
tigrfam_desc protein-export chaperone SecB;
tigrfam_mainrole Protein fate;
tigrfam_name secB;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00809 evalue:8.9e-41 score:138.3 best_domain_score:137.9 name:TIGR00809;
158409 157867 CDS
ID metaerg.pl|01118
allko_ids K01802; K02439; K01738; K01011; K01007; K04564;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725570.1 18 175 evalue:2.0e-50 qcov:87.80 identity:61.90;
kegg_pathway_id 00920; 00450; 00720; 00620; 00272;
kegg_pathway_name Sulfur metabolism; Selenoamino acid metabolism; Reductive carboxylate cycle (CO2 fixation); Pyruvate metabolism; Cysteine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00581;
pfam_desc Rhodanese-like domain;
pfam_id Rhodanese;
pfam_target db:Pfam-A.hmm|PF00581.20 evalue:7.5e-16 score:57.8 best_domain_score:57.4 name:Rhodanese;
sprot_desc hypothetical protein;
sprot_id sp|P0AG29|YIBN_ECO57;
sprot_target db:uniprot_sprot|sp|P0AG29|YIBN_ECO57 18 159 evalue:2.7e-17 qcov:78.90 identity:34.30;
tm_num 1;
158409 157867 transmembrane_helix
ID metaerg.pl|01119
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i157927-157995o;
158490 160022 CDS
ID metaerg.pl|01120
allec_ids 5.4.2.12;
allgo_ids GO:0004619; GO:0005737; GO:0006007; GO:0030145; GO:0005829; GO:0046537; GO:0044262; GO:0006096;
allko_ids K01834; K15633;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725569.1 1 505 evalue:4.3e-207 qcov:99.00 identity:71.30;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF06415; PF01676;
pfam_desc BPG-independent PGAM N-terminus (iPGM_N); Metalloenzyme superfamily;
pfam_id iPGM_N; Metalloenzyme;
pfam_target db:Pfam-A.hmm|PF06415.13 evalue:1e-74 score:249.8 best_domain_score:249.4 name:iPGM_N; db:Pfam-A.hmm|PF01676.18 evalue:8.7e-80 score:266.9 best_domain_score:266.7 name:Metalloenzyme;
sprot_desc 2,3-bisphosphoglycerate-independent phosphoglycerate mutase;
sprot_id sp|Q9HU53|GPMI_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HU53|GPMI_PSEAE 1 506 evalue:7.5e-166 qcov:99.20 identity:58.00;
tigrfam_acc TIGR01307;
tigrfam_desc phosphoglycerate mutase (2,3-diphosphoglycerate-independent);
tigrfam_mainrole Energy metabolism;
tigrfam_name pgm_bpd_ind;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01307 evalue:1.5e-210 score:699.1 best_domain_score:699.0 name:TIGR01307;
160006 161169 CDS
ID metaerg.pl|01121
allgo_ids GO:0032153; GO:0030288; GO:0042597; GO:0005886; GO:0016787; GO:0001896; GO:0007049; GO:0009273; GO:0051345; GO:0042493; GO:0009314; GO:0000920;
allko_ids K22719;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725568.1 9 386 evalue:2.7e-108 qcov:97.70 identity:56.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:8.1e-24 score:82.9 best_domain_score:82.0 name:Peptidase_M23;
sp YES;
sprot_desc Murein hydrolase activator EnvC;
sprot_id sp|P37690|ENVC_ECOLI;
sprot_target db:uniprot_sprot|sp|P37690|ENVC_ECOLI 39 387 evalue:1.9e-28 qcov:90.20 identity:27.60;
tm_num 1;
160006 160089 signal_peptide
ID metaerg.pl|01122
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
160006 161169 transmembrane_helix
ID metaerg.pl|01123
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i160024-160083o;
161226 162410 CDS
ID metaerg.pl|01124
allec_ids 3.4.21.102; 3.4.21.-;
allgo_ids GO:0005515; GO:0005576; GO:0008236;
allko_ids K03797;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylomonadaceae;g__WM-3-3;s__WM-3-3 sp002928995;
genomedb_acc GCA_002928995.1;
genomedb_target db:genomedb|GCA_002928995.1|PPD34174.1 4 372 evalue:3.1e-88 qcov:93.70 identity:46.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF13180; PF17820; PF03572;
pfam_desc PDZ domain; PDZ domain; Peptidase family S41;
pfam_id PDZ_2; PDZ_6; Peptidase_S41;
pfam_target db:Pfam-A.hmm|PF13180.6 evalue:2.4e-12 score:46.2 best_domain_score:45.2 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:3.5e-11 score:42.0 best_domain_score:40.8 name:PDZ_6; db:Pfam-A.hmm|PF03572.18 evalue:1.1e-46 score:157.6 best_domain_score:157.2 name:Peptidase_S41;
sp YES;
sprot_desc Carboxy-terminal-processing protease;
sprot_id sp|Q44879|CTPA_BARBK;
sprot_target db:uniprot_sprot|sp|Q44879|CTPA_BARBK 1 362 evalue:2.1e-70 qcov:91.90 identity:39.10;
tigrfam_acc TIGR00225;
tigrfam_desc C-terminal processing peptidase;
tigrfam_mainrole Protein fate;
tigrfam_name prc;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00225 evalue:3.8e-85 score:285.0 best_domain_score:284.7 name:TIGR00225;
161226 161291 signal_peptide
ID metaerg.pl|01125
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
162418 163209 CDS
ID metaerg.pl|01126
allgo_ids GO:0003824; GO:0005975;
allko_ids K09798;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169564.1 7 249 evalue:7.5e-70 qcov:92.40 identity:58.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF04748;
pfam_desc Divergent polysaccharide deacetylase;
pfam_id Polysacc_deac_2;
pfam_target db:Pfam-A.hmm|PF04748.13 evalue:5.4e-63 score:211.3 best_domain_score:211.1 name:Polysacc_deac_2;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P44863|Y755_HAEIN;
sprot_target db:uniprot_sprot|sp|P44863|Y755_HAEIN 25 241 evalue:1.3e-31 qcov:82.50 identity:37.80;
162418 162480 signal_peptide
ID metaerg.pl|01127
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
164117 163158 CDS
ID metaerg.pl|01128
allec_ids 2.8.2.-;
allgo_ids GO:0008146; GO:0005737;
allko_ids K13270;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__PHEG01;s__PHEG01 sp002842835;
genomedb_acc GCA_002842835.1;
genomedb_target db:genomedb|GCA_002842835.1|PKP85591.1 4 305 evalue:1.2e-85 qcov:94.70 identity:52.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWYQT-4473; PWY-6558; PWY-6235; PWYQT-4472; PWY-2821; PWYQT-4471; PWYQT-4475; PWYQT-4474; PWY-601; PWY-1187;
metacyc_pathway_name glucosinolate biosynthesis from tetrahomomethionine;; heparan sulfate biosynthesis (late stages);; ; glucosinolate biosynthesis from trihomomethionine;; glucosinolate biosynthesis from phenylalanine;; glucosinolate biosynthesis from dihomomethionine;; glucosinolate biosynthesis from hexahomomethionine;; glucosinolate biosynthesis from pentahomomethionine;; glucosinolate biosynthesis from tryptophan;; glucosinolate biosynthesis from homomethionine;;
metacyc_pathway_type GLUCOSINOLATE-SYN;; Glycosaminoglycans-Biosynthesis;; ; GLUCOSINOLATE-SYN;; GLUCOSINOLATE-SYN;; GLUCOSINOLATE-SYN;; GLUCOSINOLATE-SYN;; GLUCOSINOLATE-SYN;; GLUCOSINOLATE-SYN;; GLUCOSINOLATE-SYN;;
pfam_acc PF00685; PF13469;
pfam_desc Sulfotransferase domain; Sulfotransferase family;
pfam_id Sulfotransfer_1; Sulfotransfer_3;
pfam_target db:Pfam-A.hmm|PF00685.27 evalue:3.6e-20 score:71.8 best_domain_score:69.0 name:Sulfotransfer_1; db:Pfam-A.hmm|PF13469.6 evalue:3.4e-09 score:36.6 best_domain_score:27.8 name:Sulfotransfer_3;
sprot_desc Flavonol 3-sulfotransferase;
sprot_id sp|P52835|F3ST_FLABI;
sprot_target db:uniprot_sprot|sp|P52835|F3ST_FLABI 46 298 evalue:9.0e-08 qcov:79.30 identity:21.50;
165764 164133 CDS
ID metaerg.pl|01129
allgo_ids GO:0015558; GO:1902604; GO:0016021; GO:0005886; GO:0015291; GO:0006865; GO:0015814;
allko_ids K12942;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725565.1 3 538 evalue:5.2e-243 qcov:98.70 identity:81.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF03806; PF03606;
pfam_desc AbgT putative transporter family; C4-dicarboxylate anaerobic carrier;
pfam_id ABG_transport; DcuC;
pfam_target db:Pfam-A.hmm|PF03806.13 evalue:3.1e-191 score:635.2 best_domain_score:635.0 name:ABG_transport; db:Pfam-A.hmm|PF03606.15 evalue:6.3e-08 score:30.7 best_domain_score:29.9 name:DcuC;
sprot_desc p-aminobenzoyl-glutamate transport protein;
sprot_id sp|P46133|ABGT_ECOLI;
sprot_target db:uniprot_sprot|sp|P46133|ABGT_ECOLI 38 531 evalue:6.7e-80 qcov:91.00 identity:36.80;
tm_num 13;
165764 164133 transmembrane_helix
ID metaerg.pl|01130
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i164277-164345o164433-164501i164538-164606o164616-164669i164682-164750o164817-164885i164985-165053o165135-165203i165264-165332o165375-165431i165450-165509o165552-165611i165648-165716o;
166398 165808 CDS
ID metaerg.pl|01131
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37950.1 22 196 evalue:3.3e-78 qcov:89.30 identity:75.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
sp YES;
165808 165876 signal_peptide
ID metaerg.pl|01132
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
166801 166487 CDS
ID metaerg.pl|01133
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725564.1 1 103 evalue:1.6e-36 qcov:99.00 identity:70.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF08850;
pfam_desc Domain of unknown function (DUF1820);
pfam_id DUF1820;
pfam_target db:Pfam-A.hmm|PF08850.11 evalue:3.1e-35 score:119.8 best_domain_score:119.7 name:DUF1820;
167511 166804 CDS
ID metaerg.pl|01134
allgo_ids GO:0004252; GO:0016021;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF01694;
pfam_desc Rhomboid family;
pfam_id Rhomboid;
pfam_target db:Pfam-A.hmm|PF01694.22 evalue:2.6e-30 score:104.6 best_domain_score:104.6 name:Rhomboid;
tm_num 6;
167511 166804 transmembrane_helix
ID metaerg.pl|01135
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i166858-166926o167059-167112i167131-167199o167209-167277i167296-167364o167407-167475i;
168464 167508 CDS
ID metaerg.pl|01136
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725563.1 17 318 evalue:4.7e-34 qcov:95.00 identity:36.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF16537;
pfam_desc Type II secretion system protein B;
pfam_id T2SSB;
pfam_target db:Pfam-A.hmm|PF16537.5 evalue:1.6e-16 score:58.9 best_domain_score:58.1 name:T2SSB;
tm_num 1;
168464 167508 transmembrane_helix
ID metaerg.pl|01137
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i167631-167699o;
170023 168470 CDS
ID metaerg.pl|01138
allgo_ids GO:0005524; GO:0005737; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725562.1 1 517 evalue:3.2e-197 qcov:100.00 identity:68.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00004; PF13191; PF13401; PF01471;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA ATPase domain; AAA domain; Putative peptidoglycan binding domain;
pfam_id AAA; AAA_16; AAA_22; PG_binding_1;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:2.2e-07 score:30.6 best_domain_score:28.2 name:AAA; db:Pfam-A.hmm|PF13191.6 evalue:1.2e-08 score:34.8 best_domain_score:30.9 name:AAA_16; db:Pfam-A.hmm|PF13401.6 evalue:4.8e-23 score:81.2 best_domain_score:80.1 name:AAA_22; db:Pfam-A.hmm|PF01471.18 evalue:5.1e-08 score:32.2 best_domain_score:25.4 name:PG_binding_1;
sprot_desc General secretion pathway protein A;
sprot_id sp|P45754|GSPA_AERHY;
sprot_target db:uniprot_sprot|sp|P45754|GSPA_AERHY 1 515 evalue:1.4e-74 qcov:99.60 identity:36.90;
173214 170053 CDS
ID metaerg.pl|01139
allec_ids 1.5.5.2; 1.2.1.88;
allgo_ids GO:0016491; GO:0055114; GO:0003842; GO:0003677; GO:0003700; GO:0016620; GO:0004657; GO:0006561; GO:0010133;
allko_ids K00294; K13821; K00318;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169880.1 1 1053 evalue:0.0e+00 qcov:100.00 identity:74.80;
kegg_pathway_id 00251; 00330;
kegg_pathway_name Glutamate metabolism; Arginine and proline metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00171; PF18327; PF01619; PF14850;
pfam_desc Aldehyde dehydrogenase family; Proline utilization A proline dehydrogenase N-terminal domain ; Proline dehydrogenase; DNA-binding domain of Proline dehydrogenase;
pfam_id Aldedh; PRODH; Pro_dh; Pro_dh-DNA_bdg;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:1.4e-110 score:369.2 best_domain_score:368.7 name:Aldedh; db:Pfam-A.hmm|PF18327.1 evalue:3.9e-09 score:35.8 best_domain_score:35.8 name:PRODH; db:Pfam-A.hmm|PF01619.18 evalue:2.9e-92 score:308.6 best_domain_score:308.1 name:Pro_dh; db:Pfam-A.hmm|PF14850.6 evalue:3.2e-46 score:155.7 best_domain_score:154.4 name:Pro_dh-DNA_bdg;
sprot_desc Bifunctional protein PutA;
sprot_id sp|O52485|PUTA_KLEAE;
sprot_target db:uniprot_sprot|sp|O52485|PUTA_KLEAE 22 1032 evalue:1.0e-294 qcov:96.00 identity:52.50;
tigrfam_acc TIGR01238;
tigrfam_desc delta-1-pyrroline-5-carboxylate dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name D1pyr5carbox3;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01238 evalue:2e-210 score:698.7 best_domain_score:698.3 name:TIGR01238;
173462 173974 CDS
ID metaerg.pl|01140
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725561.1 1 170 evalue:1.6e-52 qcov:100.00 identity:61.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF10003;
pfam_desc Integral membrane protein (DUF2244);
pfam_id DUF2244;
pfam_target db:Pfam-A.hmm|PF10003.9 evalue:1e-25 score:89.3 best_domain_score:89.1 name:DUF2244;
tm_num 2;
173462 173974 transmembrane_helix
ID metaerg.pl|01141
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i173546-173614o173624-173683i;
173977 175119 CDS
ID metaerg.pl|01142
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0005507; GO:0016020;
allko_ids K05301; K00405; K00368; K02275; K15864; K05601;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725560.1 1 380 evalue:4.7e-190 qcov:100.00 identity:83.20;
kegg_pathway_id 00190; 00920; 00910;
kegg_pathway_name Oxidative phosphorylation; Sulfur metabolism; Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metabolic_acc TIGR02866;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, caa3-type;gene:CoxB;;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00116; PF02790; PF13442; PF00034;
pfam_desc Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c;
pfam_id COX2; COX2_TM; Cytochrome_CBB3; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF00116.20 evalue:1.1e-37 score:127.8 best_domain_score:126.6 name:COX2; db:Pfam-A.hmm|PF02790.15 evalue:2.8e-16 score:58.7 best_domain_score:58.7 name:COX2_TM; db:Pfam-A.hmm|PF13442.6 evalue:1.6e-11 score:43.6 best_domain_score:42.2 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:1.3e-05 score:25.5 best_domain_score:22.0 name:Cytochrom_C;
tigrfam_acc TIGR02866;
tigrfam_desc cytochrome c oxidase, subunit II;
tigrfam_mainrole Energy metabolism;
tigrfam_name CoxB;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02866 evalue:1.2e-54 score:184.1 best_domain_score:184.1 name:TIGR02866;
tm_num 3;
173977 175119 transmembrane_helix
ID metaerg.pl|01143
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i173995-174060o174118-174186i174244-174312o;
175157 176770 CDS
ID metaerg.pl|01144
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0009060; GO:0016021; GO:0020037; GO:0055114; GO:0005886; GO:0045277; GO:0046872; GO:0015990; GO:0006119;
allko_ids K02274;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725559.1 1 537 evalue:1.1e-296 qcov:100.00 identity:92.90;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metabolic_acc TIGR02891;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, caa3-type;gene:CoxA;;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00115;
pfam_desc Cytochrome C and Quinol oxidase polypeptide I;
pfam_id COX1;
pfam_target db:Pfam-A.hmm|PF00115.20 evalue:1.3e-155 score:517.7 best_domain_score:517.5 name:COX1;
sprot_desc Probable cytochrome c oxidase subunit 1;
sprot_id sp|Q92I67|COX1_RICCN;
sprot_target db:uniprot_sprot|sp|Q92I67|COX1_RICCN 1 526 evalue:1.5e-169 qcov:98.00 identity:56.70;
tigrfam_acc TIGR02891;
tigrfam_desc cytochrome c oxidase, subunit I;
tigrfam_mainrole Energy metabolism;
tigrfam_name CtaD_CoxA;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02891 evalue:8.5e-216 score:716.6 best_domain_score:716.4 name:TIGR02891;
tm_num 12;
175157 176770 transmembrane_helix
ID metaerg.pl|01145
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology i175250-175318o175376-175444i175502-175570o175628-175696i175757-175825o175904-175972i175991-176059o176102-176170i176207-176275o176318-176386i176420-176488o176546-176614i;
176931 177485 CDS
ID metaerg.pl|01146
allgo_ids GO:0005507; GO:0016021; GO:0005886; GO:0008535;
allko_ids K02258;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725558.1 1 184 evalue:7.8e-74 qcov:100.00 identity:73.40;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF04442;
pfam_desc Cytochrome c oxidase assembly protein CtaG/Cox11;
pfam_id CtaG_Cox11;
pfam_target db:Pfam-A.hmm|PF04442.14 evalue:1.2e-49 score:167.4 best_domain_score:167.2 name:CtaG_Cox11;
sprot_desc Cytochrome c oxidase assembly protein CtaG;
sprot_id sp|A4WQ59|COXZ_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WQ59|COXZ_RHOS5 9 182 evalue:4.4e-31 qcov:94.60 identity:42.50;
tm_num 1;
176931 177485 transmembrane_helix
ID metaerg.pl|01147
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology o176958-177026i;
177502 178362 CDS
ID metaerg.pl|01148
allec_ids 1.9.3.1;
allgo_ids GO:0015002; GO:0016020; GO:0016021; GO:0005743; GO:0045277; GO:0004129; GO:0019646;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725557.1 1 286 evalue:2.2e-139 qcov:100.00 identity:82.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00510;
pfam_desc Cytochrome c oxidase subunit III;
pfam_id COX3;
pfam_target db:Pfam-A.hmm|PF00510.18 evalue:7.1e-60 score:202.2 best_domain_score:195.9 name:COX3;
sprot_desc Cytochrome c oxidase subunit 3;
sprot_id sp|P55777|COX3_GADMO;
sprot_target db:uniprot_sprot|sp|P55777|COX3_GADMO 5 284 evalue:2.5e-49 qcov:97.90 identity:41.30;
tm_num 8;
177502 178362 transmembrane_helix
ID metaerg.pl|01149
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
topology o177544-177603i177616-177684o177742-177810i177829-177897o177940-178008i178045-178113o178171-178239i178297-178356o;
181571 178509 CDS
ID metaerg.pl|01150
allec_ids 3.6.4.-;
allgo_ids GO:0003676; GO:0005524; GO:0004386;
allko_ids K13182; K01509; K12812; K05591; K13131; K12614; K05592; K03725; K03724;
casgene_acc cd09639_cas3_CAS-I;
casgene_name cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:1.1e-08 score:33.8 best_domain_score:32.8 name:cas3;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725556.1 10 1014 evalue:0.0e+00 qcov:98.50 identity:59.30;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00270; PF08494; PF00271; PF04851;
pfam_desc DEAD/DEAH box helicase; DEAD/H associated; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit;
pfam_id DEAD; DEAD_assoc; Helicase_C; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:3.2e-29 score:101.2 best_domain_score:99.2 name:DEAD; db:Pfam-A.hmm|PF08494.11 evalue:2e-51 score:173.8 best_domain_score:172.7 name:DEAD_assoc; db:Pfam-A.hmm|PF00271.31 evalue:7.3e-13 score:48.1 best_domain_score:47.0 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:1.7e-08 score:33.9 best_domain_score:32.9 name:ResIII;
sprot_desc Probable ATP-dependent helicase lhr;
sprot_id sp|P30015|LHR_ECOLI;
sprot_target db:uniprot_sprot|sp|P30015|LHR_ECOLI 12 1000 evalue:3.6e-127 qcov:97.00 identity:32.10;
182020 181571 CDS
ID metaerg.pl|01151
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725555.1 1 149 evalue:1.8e-44 qcov:100.00 identity:59.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
sp YES;
181571 181630 lipoprotein_signal_peptide
ID metaerg.pl|01152
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
183951 182017 CDS
ID metaerg.pl|01153
allgo_ids GO:0004357; GO:0042398;
allko_ids K00031; K02000; K11527; K01697; K00974; K00970; K02806; K00641; K05847; K00088;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725554.1 1 639 evalue:0.0e+00 qcov:99.20 identity:86.10;
kegg_pathway_id 00450; 02010; 02060; 00230; 00260; 00020; 00271; 00480; 00920; 00983; 00720;
kegg_pathway_name Selenoamino acid metabolism; ABC transporters - General; Phosphotransferase system (PTS); Purine metabolism; Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle); Methionine metabolism; Glutathione metabolism; Sulfur metabolism; Drug metabolism - other enzymes; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00571; PF04107;
pfam_desc CBS domain; Glutamate-cysteine ligase family 2(GCS2);
pfam_id CBS; GCS2;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:4.7e-27 score:93.4 best_domain_score:52.7 name:CBS; db:Pfam-A.hmm|PF04107.13 evalue:4.4e-06 score:25.5 best_domain_score:19.7 name:GCS2;
184097 185785 CDS
ID metaerg.pl|01154
allec_ids 6.2.1.3;
allgo_ids GO:0003824; GO:0016020; GO:0003996; GO:0005524; GO:0102391; GO:0004467;
allko_ids K01904; K01909; K01784; K01895; K01897; K01652; K00666; K03367; K00143; K01776; K01779; K01912; K00992; K02364; K05939; K01586; K01913;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725553.1 1 562 evalue:5.5e-280 qcov:100.00 identity:83.80;
kegg_pathway_id 00720; 00520; 00632; 00940; 00620; 00903; 00960; 00300; 00650; 00640; 00290; 00310; 00010; 00281; 00564; 00770; 01053; 00930; 00252; 00251; 00473; 00071; 00360; 00052; 00061; 00660; 00471;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Nucleotide sugars metabolism; Benzoate degradation via CoA ligation; Phenylpropanoid biosynthesis; Pyruvate metabolism; Limonene and pinene degradation; Alkaloid biosynthesis II; Lysine biosynthesis; Butanoate metabolism; Propanoate metabolism; Valine, leucine and isoleucine biosynthesis; Lysine degradation; Glycolysis / Gluconeogenesis; Geraniol degradation; Glycerophospholipid metabolism; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; Caprolactam degradation; Alanine and aspartate metabolism; Glutamate metabolism; D-Alanine metabolism; Fatty acid metabolism; Phenylalanine metabolism; Galactose metabolism; Fatty acid biosynthesis; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY-5972; PWY-5143; P221-PWY; FAO-PWY; PWY-6001; PWY-6000; PWY-5136; PWY-5995; PWY-561;
metacyc_pathway_name stearate biosynthesis I (animals and fungi);; long-chain fatty acid activation;; octane oxidation;; fatty acid β-oxidation I;; linoleate biosynthesis II (animals);; γ-linolenate biosynthesis II (animals);; fatty acid β-oxidation II (peroxisome);; linoleate biosynthesis I (plants);; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Stearate-Biosynthesis;; Activation; Lipid-Biosynthesis;; Other-Degradation;; Fatty-Acid-Degradation;; Linoleate-Biosynthesis;; Gamma-linolenate-Biosynthesis;; Fatty-Acid-Degradation;; Linoleate-Biosynthesis;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:5.3e-113 score:377.0 best_domain_score:376.4 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:2.3e-21 score:75.8 best_domain_score:74.8 name:AMP-binding_C;
sprot_desc Long-chain-fatty-acid--CoA ligase;
sprot_id sp|P69452|LCFA_ECOL6;
sprot_target db:uniprot_sprot|sp|P69452|LCFA_ECOL6 3 553 evalue:1.1e-199 qcov:98.00 identity:60.70;
187038 185854 CDS
ID metaerg.pl|01155
allec_ids 2.7.7.7;
allgo_ids GO:0006281; GO:0005737; GO:0003684; GO:0003887; GO:0000287; GO:0006261;
allko_ids K03515; K02346;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725552.1 51 393 evalue:4.3e-138 qcov:87.10 identity:74.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
pfam_acc PF00817; PF11799; PF11798;
pfam_desc impB/mucB/samB family; impB/mucB/samB family C-terminal domain; IMS family HHH motif;
pfam_id IMS; IMS_C; IMS_HHH;
pfam_target db:Pfam-A.hmm|PF00817.20 evalue:1.1e-48 score:164.3 best_domain_score:163.1 name:IMS; db:Pfam-A.hmm|PF11799.8 evalue:9.2e-21 score:74.0 best_domain_score:72.9 name:IMS_C; db:Pfam-A.hmm|PF11798.8 evalue:9.1e-10 score:37.6 best_domain_score:36.5 name:IMS_HHH;
sprot_desc DNA polymerase IV;
sprot_id sp|P58965|DPO4_CALS4;
sprot_target db:uniprot_sprot|sp|P58965|DPO4_CALS4 42 384 evalue:9.9e-73 qcov:87.10 identity:42.60;
187141 188172 CDS
ID metaerg.pl|01156
allec_ids 2.8.1.7;
allgo_ids GO:0031071;
allko_ids K01556; K01766;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL36947.1 1 343 evalue:2.9e-98 qcov:100.00 identity:54.50;
kegg_pathway_id 00380;
kegg_pathway_name Tryptophan metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.118872; 59.4134; 0.0231561; ; 59.2714;
metacyc_pathway_id PWY0-1061; PWY0-1021;
metacyc_pathway_name superpathway of L-alanine biosynthesis;; L-alanine biosynthesis III;;
metacyc_pathway_type ALANINE-SYN; Super-Pathways;; ALANINE-SYN;;
pfam_acc PF00266;
pfam_desc Aminotransferase class-V;
pfam_id Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:1.6e-46 score:158.2 best_domain_score:157.8 name:Aminotran_5;
sprot_desc Probable cysteine desulfurase;
sprot_id sp|P57989|CSD_PASMU;
sprot_target db:uniprot_sprot|sp|P57989|CSD_PASMU 27 310 evalue:2.5e-16 qcov:82.80 identity:25.80;
>Feature NODE_5_length_167708_cov_10.8636
2 1777 CDS
ID metaerg.pl|01157
allko_ids K01448; K01183; K01728;
kegg_pathway_id 00550; 00040; 00530;
kegg_pathway_name Peptidoglycan biosynthesis; Pentose and glucuronate interconversions; Aminosugars metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00801; PF00415; PF13540;
pfam_desc PKD domain; Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1) repeat;
pfam_id PKD; RCC1; RCC1_2;
pfam_target db:Pfam-A.hmm|PF00801.20 evalue:4.4e-31 score:105.8 best_domain_score:44.0 name:PKD; db:Pfam-A.hmm|PF00415.18 evalue:2.4e-63 score:209.8 best_domain_score:49.4 name:RCC1; db:Pfam-A.hmm|PF13540.6 evalue:2.6e-53 score:176.1 best_domain_score:41.9 name:RCC1_2;
2569 1982 CDS
ID metaerg.pl|01158
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
3392 2880 CDS
ID metaerg.pl|01159
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
3966 3478 CDS
ID metaerg.pl|01160
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
4126 4572 CDS
ID metaerg.pl|01161
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
4707 5309 CDS
ID metaerg.pl|01162
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
6075 5353 CDS
ID metaerg.pl|01163
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
6596 6072 CDS
ID metaerg.pl|01164
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp000720305;
genomedb_acc GCA_000720305.1;
genomedb_target db:genomedb|GCA_000720305.1|JOJI01000043.1_14 8 172 evalue:3.6e-44 qcov:94.80 identity:54.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
6826 7425 CDS
ID metaerg.pl|01165
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
6826 6876 lipoprotein_signal_peptide
ID metaerg.pl|01166
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
7611 7871 CDS
ID metaerg.pl|01167
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
7611 7655 lipoprotein_signal_peptide
ID metaerg.pl|01168
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
7990 8667 CDS
ID metaerg.pl|01169
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 4;
7990 8667 transmembrane_helix
ID metaerg.pl|01170
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i8182-8250o8308-8376i8455-8523o8551-8619i;
9195 8740 CDS
ID metaerg.pl|01171
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
9362 10345 CDS
ID metaerg.pl|01172
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
10749 10159 CDS
ID metaerg.pl|01173
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
11861 11121 CDS
ID metaerg.pl|01174
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
12268 11813 CDS
ID metaerg.pl|01175
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
tm_num 1;
11813 11935 signal_peptide
ID metaerg.pl|01176
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
12268 11813 transmembrane_helix
ID metaerg.pl|01177
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i11846-11914o;
13013 12510 CDS
ID metaerg.pl|01178
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
15489 13090 CDS
ID metaerg.pl|01179
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF14311; PF04480; PF03457;
pfam_desc Probable Zinc-ribbon domain; Protein of unknown function (DUF559); Helicase associated domain;
pfam_id DUF4379; DUF559; HA;
pfam_target db:Pfam-A.hmm|PF14311.6 evalue:7.4e-39 score:131.1 best_domain_score:58.3 name:DUF4379; db:Pfam-A.hmm|PF04480.12 evalue:9.6e-07 score:27.9 best_domain_score:26.7 name:DUF559; db:Pfam-A.hmm|PF03457.14 evalue:1.3e-88 score:290.5 best_domain_score:56.5 name:HA;
15644 16324 CDS
ID metaerg.pl|01180
genomedb_OC d__Bacteria;p__Eremiobacterota;c__UBP9;o__UBA4705;f__UBA4705;g__UBA1432;s__UBA1432 sp002423485;
genomedb_acc GCA_002423485.1;
genomedb_target db:genomedb|GCA_002423485.1|DIWH01000004.1_2 1 226 evalue:1.2e-23 qcov:100.00 identity:34.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
16480 17202 CDS
ID metaerg.pl|01181
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
17715 18152 CDS
ID metaerg.pl|01182
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
19814 18312 CDS
ID metaerg.pl|01183
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
20354 19953 CDS
ID metaerg.pl|01184
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
21656 20412 CDS
ID metaerg.pl|01185
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
22064 21723 CDS
ID metaerg.pl|01186
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium sp900176395;
genomedb_acc GCF_900176395.1;
genomedb_target db:genomedb|GCF_900176395.1|WP_084277435.1 2 98 evalue:7.3e-06 qcov:85.80 identity:38.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
22362 23513 CDS
ID metaerg.pl|01187
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
23930 24241 CDS
ID metaerg.pl|01188
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
24283 24594 CDS
ID metaerg.pl|01189
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
25305 24715 CDS
ID metaerg.pl|01190
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
25503 25763 CDS
ID metaerg.pl|01191
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
26210 26992 CDS
ID metaerg.pl|01192
allko_ids K01181; K01179; K01183; K01448; K01225;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Aeromicrobium;s__Aeromicrobium marinum;
genomedb_acc GCF_000160775.2;
genomedb_target db:genomedb|GCF_000160775.2|WP_083789024.1 51 247 evalue:2.8e-21 qcov:75.80 identity:38.10;
kegg_pathway_id 00500; 00530; 00550;
kegg_pathway_name Starch and sucrose metabolism; Aminosugars metabolism; Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00395;
pfam_desc S-layer homology domain;
pfam_id SLH;
pfam_target db:Pfam-A.hmm|PF00395.20 evalue:1.5e-29 score:101.0 best_domain_score:35.2 name:SLH;
sp YES;
26210 26281 signal_peptide
ID metaerg.pl|01193
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
27136 27435 CDS
ID metaerg.pl|01194
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
27552 27367 CDS
ID metaerg.pl|01195
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
29281 27662 CDS
ID metaerg.pl|01196
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF07963;
pfam_desc Prokaryotic N-terminal methylation motif;
pfam_id N_methyl;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:6.1e-08 score:31.1 best_domain_score:30.1 name:N_methyl;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:1.7e-07 score:29.9 best_domain_score:28.9 name:TIGR02532;
tm_num 1;
29281 27662 transmembrane_helix
ID metaerg.pl|01197
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i27698-27766o;
29787 29560 CDS
ID metaerg.pl|01198
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
30166 29882 CDS
ID metaerg.pl|01199
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
30166 29882 transmembrane_helix
ID metaerg.pl|01200
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o29891-29950i;
31200 30343 CDS
ID metaerg.pl|01201
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus saharensis;
genomedb_acc GCF_900188205.1;
genomedb_target db:genomedb|GCF_900188205.1|WP_089405498.1 67 284 evalue:2.5e-63 qcov:76.50 identity:59.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
31236 31754 CDS
ID metaerg.pl|01202
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
33244 32096 CDS
ID metaerg.pl|01203
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
33589 33819 CDS
ID metaerg.pl|01204
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
33589 33819 transmembrane_helix
ID metaerg.pl|01205
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o33670-33738i;
34768 33887 CDS
ID metaerg.pl|01206
allgo_ids GO:0003910; GO:0005524; GO:0006281; GO:0006310;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF01068;
pfam_desc ATP dependent DNA ligase domain;
pfam_id DNA_ligase_A_M;
pfam_target db:Pfam-A.hmm|PF01068.21 evalue:1.1e-20 score:73.3 best_domain_score:72.7 name:DNA_ligase_A_M;
35367 35092 CDS
ID metaerg.pl|01207
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
35622 35963 CDS
ID metaerg.pl|01208
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
36079 36369 CDS
ID metaerg.pl|01209
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
36595 36783 CDS
ID metaerg.pl|01210
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
37174 37488 CDS
ID metaerg.pl|01211
allgo_ids GO:0003677; GO:0004803; GO:0006313;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Haloechinothrix;s__Haloechinothrix alba;
genomedb_acc GCF_900188115.1;
genomedb_target db:genomedb|GCF_900188115.1|WP_089300810.1 9 104 evalue:2.3e-22 qcov:92.30 identity:60.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF01527; PF13542;
pfam_desc Transposase; Helix-turn-helix domain of transposase family ISL3;
pfam_id HTH_Tnp_1; HTH_Tnp_ISL3;
pfam_target db:Pfam-A.hmm|PF01527.20 evalue:1.1e-16 score:60.1 best_domain_score:59.4 name:HTH_Tnp_1; db:Pfam-A.hmm|PF13542.6 evalue:6.5e-08 score:31.1 best_domain_score:30.3 name:HTH_Tnp_ISL3;
37485 38390 CDS
ID metaerg.pl|01212
allgo_ids GO:0015074; GO:0003676;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__Bog-756;s__Bog-756 sp003138855;
genomedb_acc GCA_003138855.1;
genomedb_target db:genomedb|GCA_003138855.1|PLHF01000080.1_1 1 293 evalue:8.0e-76 qcov:97.30 identity:51.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF13610; PF13276; PF13384; PF00665; PF13333; PF13683;
pfam_desc domain; HTH-like domain; Homeodomain-like domain; Integrase core domain; Integrase core domain; Integrase core domain;
pfam_id DDE_Tnp_IS240; HTH_21; HTH_23; rve; rve_2; rve_3;
pfam_target db:Pfam-A.hmm|PF13610.6 evalue:2e-09 score:37.1 best_domain_score:36.5 name:DDE_Tnp_IS240; db:Pfam-A.hmm|PF13276.6 evalue:6.9e-18 score:63.8 best_domain_score:62.9 name:HTH_21; db:Pfam-A.hmm|PF13384.6 evalue:4.2e-06 score:25.7 best_domain_score:20.3 name:HTH_23; db:Pfam-A.hmm|PF00665.26 evalue:6.9e-31 score:106.1 best_domain_score:104.9 name:rve; db:Pfam-A.hmm|PF13333.6 evalue:9.4e-09 score:34.6 best_domain_score:33.7 name:rve_2; db:Pfam-A.hmm|PF13683.6 evalue:5.3e-15 score:54.2 best_domain_score:52.2 name:rve_3;
sprot_desc Insertion element IS600 uncharacterized 31 kDa protein;
sprot_id sp|P16940|YIS2_SHISO;
sprot_target db:uniprot_sprot|sp|P16940|YIS2_SHISO 21 291 evalue:8.4e-40 qcov:90.00 identity:34.90;
38856 39791 CDS
ID metaerg.pl|01213
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
41243 39603 CDS
ID metaerg.pl|01214
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 10;
41243 39603 transmembrane_helix
ID metaerg.pl|01215
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i39774-39842o39915-39983i40044-40112o40170-40238i40314-40382o40392-40460i40479-40547o40560-40628i40665-40733o40746-40814i;
42059 41334 CDS
ID metaerg.pl|01216
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF10708;
pfam_desc Protein of unknown function (DUF2510);
pfam_id DUF2510;
pfam_target db:Pfam-A.hmm|PF10708.9 evalue:1.8e-08 score:33.2 best_domain_score:33.2 name:DUF2510;
tm_num 1;
42059 41334 transmembrane_helix
ID metaerg.pl|01217
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i41538-41606o;
42592 44106 CDS
ID metaerg.pl|01218
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea carbonis;
genomedb_acc GCF_000767175.1;
genomedb_target db:genomedb|GCF_000767175.1|WP_043604170.1 68 428 evalue:1.7e-22 qcov:71.60 identity:31.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
42592 44106 transmembrane_helix
ID metaerg.pl|01219
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o43864-43917i;
45955 44153 CDS
ID metaerg.pl|01220
allgo_ids GO:0003677;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF17764;
pfam_desc 3′ DNA-binding domain (3′BD);
pfam_id PriA_3primeBD;
pfam_target db:Pfam-A.hmm|PF17764.1 evalue:1.6e-08 score:33.6 best_domain_score:32.3 name:PriA_3primeBD;
45982 46170 CDS
ID metaerg.pl|01221
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
tm_num 1;
45982 46092 signal_peptide
ID metaerg.pl|01222
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
45982 46170 transmembrane_helix
ID metaerg.pl|01223
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i46018-46086o;
47433 46213 CDS
ID metaerg.pl|01224
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
48924 47533 CDS
ID metaerg.pl|01225
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 4;
48924 47533 transmembrane_helix
ID metaerg.pl|01226
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i47803-47871o47950-48018i48037-48105o48115-48168i;
49110 49619 CDS
ID metaerg.pl|01227
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
50129 49599 CDS
ID metaerg.pl|01228
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 4;
50129 49599 transmembrane_helix
ID metaerg.pl|01229
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i49656-49709o49737-49796i49833-49901o49944-50012i;
50246 50740 CDS
ID metaerg.pl|01230
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
50246 50740 transmembrane_helix
ID metaerg.pl|01231
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i50279-50347o;
50782 51255 CDS
ID metaerg.pl|01232
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
50782 51255 transmembrane_helix
ID metaerg.pl|01233
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i50788-50856o;
51577 51275 CDS
ID metaerg.pl|01234
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
51721 52503 CDS
ID metaerg.pl|01235
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 3;
51721 52503 transmembrane_helix
ID metaerg.pl|01236
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o51805-51873i52045-52113o52234-52302i;
53634 52558 CDS
ID metaerg.pl|01237
allgo_ids GO:0003677; GO:0003887; GO:0006260; GO:0008408; GO:0009360;
allko_ids K02338;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Labraceae;g__Labrys;s__Labrys sp001676615;
genomedb_acc GCF_001676615.1;
genomedb_target db:genomedb|GCF_001676615.1|WP_068285739.1 10 355 evalue:7.9e-14 qcov:96.60 identity:22.80;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00712; PF02768;
pfam_desc DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, C-terminal domain;
pfam_id DNA_pol3_beta; DNA_pol3_beta_3;
pfam_target db:Pfam-A.hmm|PF00712.19 evalue:4e-10 score:39.1 best_domain_score:30.9 name:DNA_pol3_beta; db:Pfam-A.hmm|PF02768.15 evalue:1.3e-13 score:50.0 best_domain_score:46.0 name:DNA_pol3_beta_3;
54595 53684 CDS
ID metaerg.pl|01238
casgene_acc cd09637_cas4_CAS-I:CAS-II:CAS-V;
casgene_name cas4;
casgene_target db:casgenes.hmm|cd09637_cas4_CAS-I:CAS-II:CAS-V evalue:2.6e-07 score:30.2 best_domain_score:22.7 name:cas4;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA5794;g__UBA6912;s__UBA6912 sp002450985;
genomedb_acc GCA_002450985.1;
genomedb_target db:genomedb|GCA_002450985.1|DKBA01000264.1_2 3 283 evalue:1.3e-36 qcov:92.70 identity:35.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF12705;
pfam_desc PD-(D/E)XK nuclease superfamily;
pfam_id PDDEXK_1;
pfam_target db:Pfam-A.hmm|PF12705.7 evalue:3.3e-22 score:78.8 best_domain_score:76.8 name:PDDEXK_1;
54760 55314 CDS
ID metaerg.pl|01239
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
56292 55300 CDS
ID metaerg.pl|01240
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
58136 56289 CDS
ID metaerg.pl|01241
allgo_ids GO:0000166; GO:0003677; GO:0005524;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora;s__Spirillospora sp001942465;
genomedb_acc GCF_001942465.1;
genomedb_target db:genomedb|GCF_001942465.1|WP_075895851.1 17 607 evalue:6.0e-86 qcov:96.10 identity:35.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF05872; PF01935; PF01580; PF12696; PF10412;
pfam_desc Bacterial protein of unknown function (DUF853); Helicase HerA, central domain; FtsK/SpoIIIE family; TraM recognition site of TraD and TraG; Type IV secretion-system coupling protein DNA-binding domain;
pfam_id DUF853; DUF87; FtsK_SpoIIIE; TraG-D_C; TrwB_AAD_bind;
pfam_target db:Pfam-A.hmm|PF05872.12 evalue:1.3e-05 score:23.2 best_domain_score:19.8 name:DUF853; db:Pfam-A.hmm|PF01935.17 evalue:1.9e-06 score:27.4 best_domain_score:26.3 name:DUF87; db:Pfam-A.hmm|PF01580.18 evalue:1.8e-06 score:26.7 best_domain_score:20.4 name:FtsK_SpoIIIE; db:Pfam-A.hmm|PF12696.7 evalue:1.5e-12 score:46.8 best_domain_score:46.0 name:TraG-D_C; db:Pfam-A.hmm|PF10412.9 evalue:7.1e-17 score:60.6 best_domain_score:44.0 name:TrwB_AAD_bind;
tm_num 3;
58136 56289 transmembrane_helix
ID metaerg.pl|01242
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o56331-56399i56457-56513o56556-56624i;
58238 59218 CDS
ID metaerg.pl|01243
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
58238 59218 transmembrane_helix
ID metaerg.pl|01244
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i58298-58366o;
59265 59576 CDS
ID metaerg.pl|01245
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 2;
59265 59576 transmembrane_helix
ID metaerg.pl|01246
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o59349-59417i59454-59522o;
59673 60017 CDS
ID metaerg.pl|01247
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 2;
59673 60017 transmembrane_helix
ID metaerg.pl|01248
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o59772-59840i59859-59927o;
60014 60772 CDS
ID metaerg.pl|01249
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
60014 60772 transmembrane_helix
ID metaerg.pl|01250
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o60176-60244i;
60839 63457 CDS
ID metaerg.pl|01251
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora;s__Spirillospora mexicana;
genomedb_acc GCF_900188105.1;
genomedb_target db:genomedb|GCF_900188105.1|WP_089311447.1 15 841 evalue:1.8e-184 qcov:94.80 identity:43.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF12846;
pfam_desc AAA-like domain;
pfam_id AAA_10;
pfam_target db:Pfam-A.hmm|PF12846.7 evalue:1.1e-22 score:79.6 best_domain_score:78.2 name:AAA_10;
63519 65171 CDS
ID metaerg.pl|01252
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
tm_num 7;
63519 63611 signal_peptide
ID metaerg.pl|01253
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
63519 65171 transmembrane_helix
ID metaerg.pl|01254
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i63552-63620o63882-63950i64011-64070o64098-64151i64869-64937o64947-65015i65076-65144o;
65174 67162 CDS
ID metaerg.pl|01255
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
65174 67162 transmembrane_helix
ID metaerg.pl|01256
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i65186-65254o;
67297 67944 CDS
ID metaerg.pl|01257
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
67297 67944 transmembrane_helix
ID metaerg.pl|01258
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i67357-67425o;
67946 72526 CDS
ID metaerg.pl|01259
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00877;
pfam_desc NlpC/P60 family;
pfam_id NLPC_P60;
pfam_target db:Pfam-A.hmm|PF00877.19 evalue:2.2e-13 score:49.4 best_domain_score:48.4 name:NLPC_P60;
tm_num 1;
67946 72526 transmembrane_helix
ID metaerg.pl|01260
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i69050-69118o;
72526 73326 CDS
ID metaerg.pl|01261
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
72526 72615 lipoprotein_signal_peptide
ID metaerg.pl|01262
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
74325 73330 CDS
ID metaerg.pl|01263
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Ilumatobacteraceae;g__Ilumatobacter_A;s__Ilumatobacter_A coccineus;
genomedb_acc GCA_002748455.1;
genomedb_target db:genomedb|GCA_002748455.1|PIE31903.1 35 330 evalue:1.4e-28 qcov:89.40 identity:33.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF12705;
pfam_desc PD-(D/E)XK nuclease superfamily;
pfam_id PDDEXK_1;
pfam_target db:Pfam-A.hmm|PF12705.7 evalue:3.9e-10 score:39.3 best_domain_score:38.9 name:PDDEXK_1;
74746 76062 CDS
ID metaerg.pl|01264
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
76129 76986 CDS
ID metaerg.pl|01265
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 3;
76129 76986 transmembrane_helix
ID metaerg.pl|01266
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i76288-76356o76366-76434i76468-76536o;
77082 78920 CDS
ID metaerg.pl|01267
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
78975 79157 CDS
ID metaerg.pl|01268
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
78975 79157 transmembrane_helix
ID metaerg.pl|01269
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o79017-79085i;
79188 79943 CDS
ID metaerg.pl|01270
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 4;
79188 79943 transmembrane_helix
ID metaerg.pl|01271
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i79476-79544o79572-79640i79677-79745o79788-79856i;
80547 79993 CDS
ID metaerg.pl|01272
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
80583 81170 CDS
ID metaerg.pl|01273
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF13302;
pfam_desc Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_3;
pfam_target db:Pfam-A.hmm|PF13302.7 evalue:2.7e-06 score:27.4 best_domain_score:26.8 name:Acetyltransf_3;
81163 82041 CDS
ID metaerg.pl|01274
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
82094 86749 CDS
ID metaerg.pl|01275
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
86944 88251 CDS
ID metaerg.pl|01276
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF16976;
pfam_desc Flp pilus assembly protein RcpC/CpaB;
pfam_id RcpC;
pfam_target db:Pfam-A.hmm|PF16976.5 evalue:9.1e-11 score:41.1 best_domain_score:39.2 name:RcpC;
tm_num 1;
86944 88251 transmembrane_helix
ID metaerg.pl|01277
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i87163-87216o;
88333 90420 CDS
ID metaerg.pl|01278
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF13614; PF01656; PF09140; PF10609;
pfam_desc AAA domain; CobQ/CobB/MinD/ParA nucleotide binding domain; ATPase MipZ; NUBPL iron-transfer P-loop NTPase;
pfam_id AAA_31; CbiA; MipZ; ParA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:1.1e-14 score:54.0 best_domain_score:52.8 name:AAA_31; db:Pfam-A.hmm|PF01656.23 evalue:6e-10 score:38.5 best_domain_score:37.2 name:CbiA; db:Pfam-A.hmm|PF09140.11 evalue:6.2e-05 score:21.6 best_domain_score:19.9 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:2e-07 score:30.0 best_domain_score:28.1 name:ParA;
sp YES;
88333 88383 signal_peptide
ID metaerg.pl|01279
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
90423 92210 CDS
ID metaerg.pl|01280
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00437;
pfam_desc Type II/IV secretion system protein;
pfam_id T2SSE;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:2.3e-60 score:203.2 best_domain_score:202.6 name:T2SSE;
92207 93145 CDS
ID metaerg.pl|01281
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00482;
pfam_desc Type II secretion system (T2SS), protein F;
pfam_id T2SSF;
pfam_target db:Pfam-A.hmm|PF00482.23 evalue:7.5e-12 score:44.5 best_domain_score:44.5 name:T2SSF;
tm_num 5;
92207 93145 transmembrane_helix
ID metaerg.pl|01282
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o92234-92302i92444-92512o92522-92590i92957-93016o93044-93112i;
93145 94035 CDS
ID metaerg.pl|01283
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Caenispirillum;s__Caenispirillum salinarum;
genomedb_acc GCF_000315795.1;
genomedb_target db:genomedb|GCF_000315795.1|WP_009541533.1 65 288 evalue:2.9e-06 qcov:75.70 identity:24.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00482;
pfam_desc Type II secretion system (T2SS), protein F;
pfam_id T2SSF;
pfam_target db:Pfam-A.hmm|PF00482.23 evalue:2.5e-09 score:36.4 best_domain_score:36.4 name:T2SSF;
sp YES;
tm_num 5;
93145 93183 lipoprotein_signal_peptide
ID metaerg.pl|01284
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
93145 94035 transmembrane_helix
ID metaerg.pl|01285
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i93148-93201o93406-93474i93487-93555o93613-93681i93949-94017o;
94035 94559 CDS
ID metaerg.pl|01286
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF07811;
pfam_desc TadE-like protein;
pfam_id TadE;
pfam_target db:Pfam-A.hmm|PF07811.12 evalue:5.9e-10 score:38.5 best_domain_score:37.7 name:TadE;
tm_num 1;
94035 94559 transmembrane_helix
ID metaerg.pl|01287
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i94146-94214o;
94556 95101 CDS
ID metaerg.pl|01288
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
94556 95101 transmembrane_helix
ID metaerg.pl|01289
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i94625-94693o;
95344 96096 CDS
ID metaerg.pl|01290
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Root1293;s__Root1293 sp001425325;
genomedb_acc GCF_001425325.1;
genomedb_target db:genomedb|GCF_001425325.1|WP_082513643.1 38 231 evalue:4.2e-22 qcov:77.60 identity:36.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 4;
95344 96096 transmembrane_helix
ID metaerg.pl|01291
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i95467-95535o95572-95640i95734-95802o95935-96003i;
96265 96876 CDS
ID metaerg.pl|01292
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
96873 97970 CDS
ID metaerg.pl|01293
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
98130 99221 CDS
ID metaerg.pl|01294
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Alcaligenes;s__Alcaligenes sp003521065;
genomedb_acc GCA_003521065.1;
genomedb_target db:genomedb|GCA_003521065.1|HCA18960.1 21 337 evalue:3.5e-41 qcov:87.30 identity:38.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00437;
pfam_desc Type II/IV secretion system protein;
pfam_id T2SSE;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:2.2e-46 score:157.4 best_domain_score:157.0 name:T2SSE;
99392 100315 CDS
ID metaerg.pl|01295
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
tm_num 1;
99392 99466 signal_peptide
ID metaerg.pl|01296
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
99392 100315 transmembrane_helix
ID metaerg.pl|01297
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i99410-99478o;
100312 101697 CDS
ID metaerg.pl|01298
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
tm_num 1;
100312 100410 signal_peptide
ID metaerg.pl|01299
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
100312 101697 transmembrane_helix
ID metaerg.pl|01300
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i100345-100413o;
101812 103254 CDS
ID metaerg.pl|01301
allgo_ids GO:0006508; GO:0008233;
allko_ids K07260; K01286;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF01464; PF02557;
pfam_desc Transglycosylase SLT domain; D-alanyl-D-alanine carboxypeptidase;
pfam_id SLT; VanY;
pfam_target db:Pfam-A.hmm|PF01464.20 evalue:9.4e-09 score:34.2 best_domain_score:33.3 name:SLT; db:Pfam-A.hmm|PF02557.17 evalue:5.3e-12 score:44.9 best_domain_score:43.5 name:VanY;
sp YES;
101812 101859 signal_peptide
ID metaerg.pl|01302
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
103747 103340 CDS
ID metaerg.pl|01303
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
103747 103340 transmembrane_helix
ID metaerg.pl|01304
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o103367-103435i;
103901 105085 CDS
ID metaerg.pl|01305
allgo_ids GO:0003700; GO:0006352; GO:0006355;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF04545;
pfam_desc Sigma-70, region 4;
pfam_id Sigma70_r4;
pfam_target db:Pfam-A.hmm|PF04545.16 evalue:1.4e-11 score:43.0 best_domain_score:41.6 name:Sigma70_r4;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:3.7e-14 score:51.8 best_domain_score:50.4 name:TIGR02937;
105225 106274 CDS
ID metaerg.pl|01306
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00497;
pfam_desc Bacterial extracellular solute-binding proteins, family 3;
pfam_id SBP_bac_3;
pfam_target db:Pfam-A.hmm|PF00497.20 evalue:6.9e-15 score:54.3 best_domain_score:32.0 name:SBP_bac_3;
sp YES;
105225 105284 lipoprotein_signal_peptide
ID metaerg.pl|01307
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
107257 106574 CDS
ID metaerg.pl|01308
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
107257 106574 transmembrane_helix
ID metaerg.pl|01309
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o106601-106669i;
107653 108189 CDS
ID metaerg.pl|01310
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
108189 108899 CDS
ID metaerg.pl|01311
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
tm_num 1;
108189 108245 lipoprotein_signal_peptide
ID metaerg.pl|01312
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
108189 108899 transmembrane_helix
ID metaerg.pl|01313
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o108804-108872i;
108896 109330 CDS
ID metaerg.pl|01314
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
108896 109330 transmembrane_helix
ID metaerg.pl|01315
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i108956-109024o;
111318 109339 CDS
ID metaerg.pl|01316
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
111486 112295 CDS
ID metaerg.pl|01317
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
112372 113223 CDS
ID metaerg.pl|01318
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
113435 114496 CDS
ID metaerg.pl|01319
allgo_ids GO:0003697; GO:0005524; GO:0006281; GO:0005737; GO:0003684; GO:0008094; GO:0006310; GO:0009432;
allko_ids K03553;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Kitasatospora;s__Kitasatospora sp002813365;
genomedb_acc GCF_002813365.1;
genomedb_target db:genomedb|GCF_002813365.1|WP_100888332.1 8 353 evalue:1.9e-76 qcov:98.00 identity:49.30;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF06745; PF08423; PF00154;
pfam_desc KaiC; Rad51; recA bacterial DNA recombination protein;
pfam_id ATPase; Rad51; RecA;
pfam_target db:Pfam-A.hmm|PF06745.13 evalue:4.5e-07 score:28.7 best_domain_score:25.9 name:ATPase; db:Pfam-A.hmm|PF08423.11 evalue:2.9e-09 score:35.8 best_domain_score:19.5 name:Rad51; db:Pfam-A.hmm|PF00154.21 evalue:4.2e-96 score:320.7 best_domain_score:320.3 name:RecA;
sprot_desc hypothetical protein;
sprot_id sp|C1B381|RECA_RHOOB;
sprot_target db:uniprot_sprot|sp|C1B381|RECA_RHOOB 4 297 evalue:7.7e-77 qcov:83.30 identity:52.70;
tigrfam_acc TIGR02012;
tigrfam_desc protein RecA;
tigrfam_mainrole DNA metabolism;
tigrfam_name tigrfam_recA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02012 evalue:3.8e-101 score:337.8 best_domain_score:337.5 name:TIGR02012;
115291 114599 CDS
ID metaerg.pl|01320
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
116450 115437 CDS
ID metaerg.pl|01321
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora;s__Spirillospora mexicana;
genomedb_acc GCF_900188105.1;
genomedb_target db:genomedb|GCF_900188105.1|WP_089311443.1 8 322 evalue:1.9e-46 qcov:93.50 identity:39.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
118296 116518 CDS
ID metaerg.pl|01322
allgo_ids GO:0005524;
allko_ids K02343; K02340; K02341;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__Coriobacteriales;f__Coriobacteriaceae;g__Collinsella;s__Collinsella phocaeensis;
genomedb_acc GCF_900119895.1;
genomedb_target db:genomedb|GCF_900119895.1|WP_072414951.1 30 580 evalue:2.9e-37 qcov:93.10 identity:31.10;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00004; PF13177; PF05496;
pfam_desc ATPase family associated with various cellular activities (AAA); DNA polymerase III, delta subunit; Holliday junction DNA helicase RuvB P-loop domain;
pfam_id AAA; DNA_pol3_delta2; RuvB_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:2.2e-06 score:27.4 best_domain_score:26.2 name:AAA; db:Pfam-A.hmm|PF13177.6 evalue:6.1e-27 score:93.6 best_domain_score:93.2 name:DNA_pol3_delta2; db:Pfam-A.hmm|PF05496.12 evalue:9.1e-07 score:28.0 best_domain_score:26.2 name:RuvB_N;
118395 120305 CDS
ID metaerg.pl|01323
allko_ids K01183; K05366; K01448; K01728;
kegg_pathway_id 00040; 00530; 00550;
kegg_pathway_name Pentose and glucuronate interconversions; Aminosugars metabolism; Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF07963; PF13540;
pfam_desc Prokaryotic N-terminal methylation motif; Regulator of chromosome condensation (RCC1) repeat;
pfam_id N_methyl; RCC1_2;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:4.3e-06 score:25.3 best_domain_score:24.2 name:N_methyl; db:Pfam-A.hmm|PF13540.6 evalue:3e-29 score:99.4 best_domain_score:28.5 name:RCC1_2;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:0.00012 score:20.9 best_domain_score:19.8 name:TIGR02532;
tm_num 1;
118395 120305 transmembrane_helix
ID metaerg.pl|01324
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i118455-118523o;
120397 121050 CDS
ID metaerg.pl|01325
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Microtrichaceae;g__UBA11034;s__UBA11034 sp003514205;
genomedb_acc GCA_003514205.1;
genomedb_target db:genomedb|GCA_003514205.1|HBX77012.1 8 193 evalue:1.9e-18 qcov:85.70 identity:32.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
tm_num 1;
120397 120447 lipoprotein_signal_peptide
ID metaerg.pl|01326
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
120397 121050 transmembrane_helix
ID metaerg.pl|01327
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i120409-120477o;
121104 121373 CDS
ID metaerg.pl|01328
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
121443 122525 CDS
ID metaerg.pl|01329
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
122622 123014 CDS
ID metaerg.pl|01330
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 3;
122622 123014 transmembrane_helix
ID metaerg.pl|01331
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology o122679-122738i122772-122840o122943-123002i;
123069 123629 CDS
ID metaerg.pl|01332
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
124356 123652 CDS
ID metaerg.pl|01333
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
123652 123720 signal_peptide
ID metaerg.pl|01334
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
124445 125389 CDS
ID metaerg.pl|01335
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__UBA8156;s__UBA8156 sp003456125;
genomedb_acc GCA_003456125.1;
genomedb_target db:genomedb|GCA_003456125.1|HAN45826.1 31 311 evalue:3.1e-14 qcov:89.50 identity:28.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
125680 127614 CDS
ID metaerg.pl|01336
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__PCC-7502;s__PCC-7502 sp000317085;
genomedb_acc GCF_000317085.1;
genomedb_target db:genomedb|GCF_000317085.1|WP_015167826.1 92 605 evalue:1.0e-64 qcov:79.80 identity:32.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
128510 127668 CDS
ID metaerg.pl|01337
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
128912 128607 CDS
ID metaerg.pl|01338
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
130710 129304 CDS
ID metaerg.pl|01339
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
tm_num 1;
130710 129304 transmembrane_helix
ID metaerg.pl|01340
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i129691-129759o;
132013 131006 CDS
ID metaerg.pl|01341
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
132728 132075 CDS
ID metaerg.pl|01342
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
132075 132131 lipoprotein_signal_peptide
ID metaerg.pl|01343
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
133748 132783 CDS
ID metaerg.pl|01344
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Demequinaceae;g__Demequina;s__Demequina iriomotensis;
genomedb_acc GCF_000971395.1;
genomedb_target db:genomedb|GCF_000971395.1|WP_062384533.1 1 242 evalue:8.1e-26 qcov:75.40 identity:31.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:1.1e-08 score:35.1 best_domain_score:34.2 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:3.8e-11 score:42.7 best_domain_score:29.3 name:Metallophos_2;
134782 133859 CDS
ID metaerg.pl|01345
allko_ids K00966;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__RAAP-2;s__RAAP-2 sp003133665;
genomedb_acc GCA_003133665.1;
genomedb_target db:genomedb|GCA_003133665.1|PKYK01000068.1_3 1 295 evalue:1.7e-28 qcov:96.10 identity:31.60;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
136187 134898 CDS
ID metaerg.pl|01346
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptacidiphilus;s__Streptacidiphilus jiangxiensis;
genomedb_acc GCF_900109465.1;
genomedb_target db:genomedb|GCF_900109465.1|WP_042441730.1 2 425 evalue:1.6e-24 qcov:98.80 identity:29.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF13671; PF08433; PF00149;
pfam_desc AAA domain; Chromatin associated protein KTI12 ; Calcineurin-like phosphoesterase;
pfam_id AAA_33; KTI12; Metallophos;
pfam_target db:Pfam-A.hmm|PF13671.6 evalue:2.3e-24 score:85.4 best_domain_score:84.3 name:AAA_33; db:Pfam-A.hmm|PF08433.10 evalue:2.2e-06 score:26.6 best_domain_score:26.0 name:KTI12; db:Pfam-A.hmm|PF00149.28 evalue:0.00014 score:21.7 best_domain_score:19.7 name:Metallophos;
136633 137304 CDS
ID metaerg.pl|01347
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
137408 137770 CDS
ID metaerg.pl|01348
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
137817 138395 CDS
ID metaerg.pl|01349
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp003054165;
genomedb_acc GCF_003054165.1;
genomedb_target db:genomedb|GCF_003054165.1|WP_107779278.1 32 189 evalue:1.0e-55 qcov:82.30 identity:63.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF07799;
pfam_desc Protein of unknown function (DUF1643);
pfam_id DUF1643;
pfam_target db:Pfam-A.hmm|PF07799.12 evalue:2.9e-43 score:146.5 best_domain_score:146.3 name:DUF1643;
138557 138955 CDS
ID metaerg.pl|01350
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
139342 139007 CDS
ID metaerg.pl|01351
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
141069 139465 CDS
ID metaerg.pl|01352
allgo_ids GO:0003676; GO:0005524; GO:0003677; GO:0016787;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Ga0077560;f__Ga0077560;g__Ga0077541;s__Ga0077541 sp001464995;
genomedb_acc GCA_001464995.1;
genomedb_target db:genomedb|GCA_001464995.1|LNEQ01000224.1_5 3 533 evalue:3.3e-117 qcov:99.40 identity:48.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF13604; PF00270; PF04851;
pfam_desc AAA domain; DEAD/DEAH box helicase; Type III restriction enzyme, res subunit;
pfam_id AAA_30; DEAD; ResIII;
pfam_target db:Pfam-A.hmm|PF13604.6 evalue:3.9e-07 score:29.2 best_domain_score:29.2 name:AAA_30; db:Pfam-A.hmm|PF00270.29 evalue:4.7e-08 score:32.2 best_domain_score:30.1 name:DEAD; db:Pfam-A.hmm|PF04851.15 evalue:1e-12 score:47.6 best_domain_score:45.6 name:ResIII;
sprot_desc hypothetical protein;
sprot_id sp|P9WL20|Y2917_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WL20|Y2917_MYCTO 6 530 evalue:8.1e-86 qcov:98.30 identity:39.30;
141659 141162 CDS
ID metaerg.pl|01353
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
141162 141215 lipoprotein_signal_peptide
ID metaerg.pl|01354
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
141814 142089 CDS
ID metaerg.pl|01355
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF18683;
pfam_desc Chitinase W immunoglobulin-like domain;
pfam_id ChiW_Ig_like;
pfam_target db:Pfam-A.hmm|PF18683.1 evalue:0.15 score:11.5 best_domain_score:12.7 name:ChiW_Ig_like;
143756 142212 CDS
ID metaerg.pl|01356
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Xylanimicrobium;s__Xylanimicrobium pachnodae;
genomedb_acc GCA_001592145.1;
genomedb_target db:genomedb|GCA_001592145.1|BCWJ01000043.1_6 3 510 evalue:3.2e-93 qcov:98.80 identity:41.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF13589;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;
pfam_id HATPase_c_3;
pfam_target db:Pfam-A.hmm|PF13589.6 evalue:7.2e-09 score:34.8 best_domain_score:34.0 name:HATPase_c_3;
143908 144315 CDS
ID metaerg.pl|01357
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
144485 146890 CDS
ID metaerg.pl|01358
allgo_ids GO:0005524;
allko_ids K05591; K08282; K05592; K10896; K01509;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00271; PF00176;
pfam_desc Helicase conserved C-terminal domain; SNF2 family N-terminal domain;
pfam_id Helicase_C; SNF2_N;
pfam_target db:Pfam-A.hmm|PF00271.31 evalue:4.6e-18 score:64.8 best_domain_score:64.0 name:Helicase_C; db:Pfam-A.hmm|PF00176.23 evalue:5.5e-16 score:57.4 best_domain_score:56.8 name:SNF2_N;
147023 148270 CDS
ID metaerg.pl|01359
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
149113 148715 CDS
ID metaerg.pl|01360
allgo_ids GO:0000160;
allko_ids K07677; K02484; K07642; K07651; K07648; K07778; K07673; K07641; K07646; K03407; K07682; K07654; K07675; K07647; K04757; K12767; K10681; K07676; K10715; K07636; K07653; K02480; K02482; K07710; K03388; K02668;
kegg_pathway_id 03090; 02020; 00790;
kegg_pathway_name Type II secretion system; Two-component system - General; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:1.4e-17 score:63.1 best_domain_score:62.8 name:Response_reg;
150634 149288 CDS
ID metaerg.pl|01361
allko_ids K01183; K01179; K01225; K01448; K01181;
kegg_pathway_id 00530; 00500; 00550;
kegg_pathway_name Aminosugars metabolism; Starch and sucrose metabolism; Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00188; PF00395;
pfam_desc Cysteine-rich secretory protein family; S-layer homology domain;
pfam_id CAP; SLH;
pfam_target db:Pfam-A.hmm|PF00188.26 evalue:4.2e-14 score:52.7 best_domain_score:51.7 name:CAP; db:Pfam-A.hmm|PF00395.20 evalue:8e-24 score:82.6 best_domain_score:44.6 name:SLH;
tm_num 1;
150634 149288 transmembrane_helix
ID metaerg.pl|01362
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i149435-149494o;
150719 151945 CDS
ID metaerg.pl|01363
genomedb_OC d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__UBA2391;s__UBA2391 sp002343825;
genomedb_acc GCA_002343825.1;
genomedb_target db:genomedb|GCA_002343825.1|DDSL01000150.1_3 12 403 evalue:5.8e-37 qcov:96.10 identity:33.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:4.2e-35 score:119.1 best_domain_score:118.3 name:Peptidase_M23;
sp YES;
tm_num 1;
150719 150796 signal_peptide
ID metaerg.pl|01364
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
150719 151945 transmembrane_helix
ID metaerg.pl|01365
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i150737-150796o;
152154 153695 CDS
ID metaerg.pl|01366
allgo_ids GO:0000160;
allko_ids K11527; K10715; K07678; K02480; K02482; K07636; K07653; K07716; K02489; K07710; K07640; K03388; K02668; K10916; K08479; K07647; K07675; K07769; K12767; K02486; K13761; K11383; K10125; K11357; K04757; K07709; K07644; K06379; K10681; K07676; K07648; K07679; K02478; K07651; K07768; K07778; K11354; K07711; K07639; K08475; K07673; K01120; K07641; K07646; K07652; K07682; K07654; K07637; K03407; K11231; K07645; K07708; K07677; K01937; K08282; K07704; K02484; K00760; K11640; K11356; K11711; K07642;
genomedb_OC d__Bacteria;p__Chloroflexota_A;c__Ellin6529;o__CSP1-4;f__CSP1-4;g__GWC2-73-18;s__GWC2-73-18 sp001794945;
genomedb_acc GCA_001794945.1;
genomedb_target db:genomedb|GCA_001794945.1|OGN87281.1 19 506 evalue:1.4e-83 qcov:95.10 identity:39.50;
kegg_pathway_id 00983; 00240; 00230; 05111; 03090; 02020; 04011; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00563; PF00072;
pfam_desc EAL domain; Response regulator receiver domain;
pfam_id EAL; Response_reg;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:2.4e-43 score:147.6 best_domain_score:146.1 name:EAL; db:Pfam-A.hmm|PF00072.24 evalue:4.8e-25 score:87.1 best_domain_score:86.2 name:Response_reg;
153682 157524 CDS
ID metaerg.pl|01367
allgo_ids GO:0000155; GO:0007165;
allko_ids K08801; K02482; K14489; K02480; K07653; K07638; K07636; K11527; K02030; K13587; K07701; K10715; K07678; K02668; K03388; K08479; K07674; K10916; K02489; K07697; K11614; K07716; K07710; K07640; K07656; K01768; K12767; K13761; K02486; K11383; K11520; K14509; K07769; K11617; K04757; K11629; K10125; K02342; K11357; K02476; K07680; K07647; K13040; K10942; K11637; K07675; K07717; K04518; K01769; K07650; K06379; K07676; K10681; K07709; K13532; K07644; K07778; K11354; K07683; K11633; K02575; K07768; K00873; K07711; K13533; K11328; K07679; K02478; K07648; K07651; K07718; K07698; K07654; K07682; K00936; K07649; K07777; K03407; K07637; K13598; K07641; K07646; K08475; K07639; K01120; K04093; K07673; K07652; K07708; K07645; K07677; K10909; K07704; K01937; K08282; K11231; K07643; K02491; K13490; K01090; K11711; K07642; K02484; K11356; K04486; K11640;
kegg_pathway_id 02020; 04011; 00620; 03090; 00790; 00340; 00710; 00010; 05111; 00400; 00230; 03030; 00240;
kegg_pathway_name Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system; Folate biosynthesis; Histidine metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Vibrio cholerae pathogenic cycle; Phenylalanine, tyrosine and tryptophan biosynthesis; Purine metabolism; DNA replication; Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF02518; PF00512; PF05231; PF00989; PF08447; PF08448; PF12860; PF13188; PF13426; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; MASE1; PAS fold; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; MASE1; PAS; PAS_3; PAS_4; PAS_7; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:3.2e-21 score:75.2 best_domain_score:74.2 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:9.9e-07 score:27.9 best_domain_score:25.8 name:HisKA; db:Pfam-A.hmm|PF05231.14 evalue:1.8e-13 score:49.5 best_domain_score:48.9 name:MASE1; db:Pfam-A.hmm|PF00989.25 evalue:6.1e-38 score:128.5 best_domain_score:44.5 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:7.5e-19 score:67.1 best_domain_score:33.0 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:1.1e-37 score:127.9 best_domain_score:44.3 name:PAS_4; db:Pfam-A.hmm|PF12860.7 evalue:8.3e-11 score:41.3 best_domain_score:19.1 name:PAS_7; db:Pfam-A.hmm|PF13188.7 evalue:1.4e-24 score:84.8 best_domain_score:34.0 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:1.2e-35 score:121.2 best_domain_score:46.2 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:6.8e-23 score:80.2 best_domain_score:79.4 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:2.1e-47 score:159.5 best_domain_score:62.2 name:TIGR00229;
tm_num 9;
153682 157524 transmembrane_helix
ID metaerg.pl|01368
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i153739-153807o153817-153885i153904-153957o153967-154035i154069-154137o154180-154239i154276-154335o154393-154461i154522-154575o;
157487 157966 CDS
ID metaerg.pl|01369
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF14216;
pfam_desc Domain of unknown function (DUF4326);
pfam_id DUF4326;
pfam_target db:Pfam-A.hmm|PF14216.6 evalue:5.7e-15 score:55.0 best_domain_score:54.5 name:DUF4326;
158272 158030 CDS
ID metaerg.pl|01370
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
tm_num 1;
158030 158107 signal_peptide
ID metaerg.pl|01371
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
158272 158030 transmembrane_helix
ID metaerg.pl|01372
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i158048-158107o;
158454 158990 CDS
ID metaerg.pl|01373
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
tm_num 1;
158454 158567 lipoprotein_signal_peptide
ID metaerg.pl|01374
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
158454 158990 transmembrane_helix
ID metaerg.pl|01375
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i158517-158585o;
159061 159576 CDS
ID metaerg.pl|01376
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
160038 159592 CDS
ID metaerg.pl|01377
allec_ids 3.1.26.4;
allgo_ids GO:0003676; GO:0004523; GO:0005737; GO:0000287; GO:0006401;
allko_ids K03469;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__UBA10347;g__UBA10347;s__UBA10347 sp003485885;
genomedb_acc GCA_003485885.1;
genomedb_target db:genomedb|GCA_003485885.1|HAY69761.1 1 140 evalue:4.4e-35 qcov:94.60 identity:54.60;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00075;
pfam_desc RNase H;
pfam_id RNase_H;
pfam_target db:Pfam-A.hmm|PF00075.24 evalue:4e-41 score:139.8 best_domain_score:139.6 name:RNase_H;
sprot_desc Ribonuclease H;
sprot_id sp|Q2ND39|RNH_ERYLH;
sprot_target db:uniprot_sprot|sp|Q2ND39|RNH_ERYLH 1 145 evalue:9.3e-32 qcov:98.00 identity:48.30;
160149 161459 CDS
ID metaerg.pl|01378
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
161542 161889 CDS
ID metaerg.pl|01379
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
tm_num 1;
161542 161595 lipoprotein_signal_peptide
ID metaerg.pl|01380
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
161542 161889 transmembrane_helix
ID metaerg.pl|01381
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i161560-161619o;
162169 163683 CDS
ID metaerg.pl|01382
allgo_ids GO:0003677; GO:0006355;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF00356;
pfam_desc Bacterial regulatory proteins, lacI family;
pfam_id LacI;
pfam_target db:Pfam-A.hmm|PF00356.21 evalue:7.4e-05 score:21.7 best_domain_score:20.2 name:LacI;
163918 164295 CDS
ID metaerg.pl|01383
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
pfam_acc PF12957;
pfam_desc Domain of unknown function (DUF3846);
pfam_id DUF3846;
pfam_target db:Pfam-A.hmm|PF12957.7 evalue:9.7e-11 score:41.1 best_domain_score:40.7 name:DUF3846;
164911 165150 CDS
ID metaerg.pl|01384
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
165331 166464 CDS
ID metaerg.pl|01385
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
166557 167114 CDS
ID metaerg.pl|01386
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
167202 167672 CDS
ID metaerg.pl|01387
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
sp YES;
tm_num 2;
167202 167297 signal_peptide
ID metaerg.pl|01388
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
167202 167672 transmembrane_helix
ID metaerg.pl|01389
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00611728; 18.0347; ; 0.00174865; 18.0426;
topology i167238-167306o167490-167558i;
>Feature NODE_6_length_164987_cov_91.9681
787 2 CDS
ID metaerg.pl|01390
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799066.1 1 262 evalue:2.9e-114 qcov:100.00 identity:83.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF05816;
pfam_desc Toxic anion resistance protein (TelA);
pfam_id TelA;
pfam_target db:Pfam-A.hmm|PF05816.11 evalue:1.9e-62 score:210.5 best_domain_score:210.0 name:TelA;
sprot_desc hypothetical protein;
sprot_id sp|Q8Y5T8|Y1967_LISMO;
sprot_target db:uniprot_sprot|sp|Q8Y5T8|Y1967_LISMO 51 262 evalue:7.1e-27 qcov:80.90 identity:34.00;
1694 828 CDS
ID metaerg.pl|01391
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468965.1 1 288 evalue:5.8e-108 qcov:100.00 identity:73.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF10112;
pfam_desc 5-bromo-4-chloroindolyl phosphate hydrolysis protein;
pfam_id Halogen_Hydrol;
pfam_target db:Pfam-A.hmm|PF10112.9 evalue:7.8e-23 score:80.7 best_domain_score:79.8 name:Halogen_Hydrol;
tm_num 3;
1694 828 transmembrane_helix
ID metaerg.pl|01392
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i909-977o987-1055i1113-1181o;
2773 1940 CDS
ID metaerg.pl|01393
allec_ids 5.4.99.-;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982;
allko_ids K06178;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799062.1 1 272 evalue:8.3e-120 qcov:98.20 identity:83.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-5377; PWY-6005; RIBOKIN-PWY; PWY-112; PWY-6115; PWY-5672; PWY-6008; PWY-6109; PWY-5203; PWY-5992;
metacyc_pathway_name α-amyrin biosynthesis;; marneral biosynthesis;; ribose phosphorylation;; lupeol biosynthesis;; ; ginsenosides biosynthesis;; baruol biosynthesis;; mangrove triterpenoid biosynthesis;; soybean saponin I biosynthesis;; thalianol and derivatives biosynthesis;;
metacyc_pathway_type TRITERPENOID-SYN;; TRITERPENOID-SYN;; Sugars-And-Polysaccharides-Degradation;; TRITERPENOID-SYN;; ; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;;
pfam_acc PF00849; PF01479;
pfam_desc RNA pseudouridylate synthase; S4 domain;
pfam_id PseudoU_synth_2; S4;
pfam_target db:Pfam-A.hmm|PF00849.22 evalue:1.7e-12 score:46.9 best_domain_score:42.5 name:PseudoU_synth_2; db:Pfam-A.hmm|PF01479.25 evalue:1.7e-15 score:55.7 best_domain_score:49.4 name:S4;
sprot_desc Uncharacterized RNA pseudouridine synthase RF_0863;
sprot_id sp|Q4UL59|Y544_RICFE;
sprot_target db:uniprot_sprot|sp|Q4UL59|Y544_RICFE 10 236 evalue:9.8e-51 qcov:81.90 identity:46.70;
tigrfam_acc TIGR00093;
tigrfam_desc pseudouridine synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00093;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00093 evalue:1.1e-43 score:147.9 best_domain_score:147.6 name:TIGR00093;
3470 2832 CDS
ID metaerg.pl|01394
allec_ids 4.3.2.10; 2.4.2.-;
allgo_ids GO:0016787; GO:0005737; GO:0004359; GO:0000107; GO:0016829; GO:0006541; GO:0000105;
allko_ids K02501;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799059.1 1 212 evalue:8.3e-104 qcov:100.00 identity:87.30;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PRPP-PWY; PWY-5381; PWY-5800; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; pyridine nucleotide cycling (plants);; xylan biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; NAD-Metabolism;; SECONDARY-CELL-WALL;; HISTIDINE-SYN;;
pfam_acc PF00117; PF07722; PF01174;
pfam_desc Glutamine amidotransferase class-I; Peptidase C26; SNO glutamine amidotransferase family;
pfam_id GATase; Peptidase_C26; SNO;
pfam_target db:Pfam-A.hmm|PF00117.28 evalue:1.8e-17 score:62.9 best_domain_score:62.7 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:8e-06 score:25.0 best_domain_score:21.4 name:Peptidase_C26; db:Pfam-A.hmm|PF01174.19 evalue:7.4e-05 score:21.9 best_domain_score:12.6 name:SNO;
sprot_desc Imidazole glycerol phosphate synthase subunit HisH;
sprot_id sp|O33565|HIS5_RHOS4;
sprot_target db:uniprot_sprot|sp|O33565|HIS5_RHOS4 1 212 evalue:1.0e-84 qcov:100.00 identity:68.90;
tigrfam_acc TIGR01855;
tigrfam_desc imidazole glycerol phosphate synthase, glutamine amidotransferase subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name IMP_synth_hisH;
tigrfam_sub1role Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01855 evalue:1.4e-57 score:193.9 best_domain_score:193.7 name:TIGR01855;
4059 3472 CDS
ID metaerg.pl|01395
allec_ids 4.2.1.19;
allgo_ids GO:0000105; GO:0004424; GO:0005737;
allko_ids K01089; K01693;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799057.1 1 195 evalue:2.5e-94 qcov:100.00 identity:87.20;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PRPP-PWY; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; HISTIDINE-SYN;;
pfam_acc PF00475;
pfam_desc Imidazoleglycerol-phosphate dehydratase;
pfam_id IGPD;
pfam_target db:Pfam-A.hmm|PF00475.18 evalue:1e-68 score:229.4 best_domain_score:229.0 name:IGPD;
sprot_desc Imidazoleglycerol-phosphate dehydratase;
sprot_id sp|Q5LU92|HIS7_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LU92|HIS7_RUEPO 1 195 evalue:2.0e-90 qcov:100.00 identity:80.50;
4160 4867 CDS
ID metaerg.pl|01396
allec_ids 2.4.2.1;
allgo_ids GO:0003824; GO:0009116; GO:0004731; GO:0042278;
allko_ids K01243; K03784;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799300.1 1 233 evalue:1.6e-111 qcov:99.10 identity:85.00;
kegg_pathway_id 00271; 00760; 00230; 00240;
kegg_pathway_name Methionine metabolism; Nicotinate and nicotinamide metabolism; Purine metabolism; Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id P121-PWY; PWY-6353; PWY0-1296; PWY-6579; P1-PWY; PWY-5695; SALVADEHYPOX-PWY; SALVPURINE2-PWY; URSIN-PWY;
metacyc_pathway_name adenine and adenosine salvage I;; purine nucleotides degradation II (aerobic);; purine ribonucleosides degradation;; superpathway of guanine and guanosine salvage;; ; inosine 5'-phosphate degradation;; adenosine nucleotides degradation II;; xanthine and xanthosine salvage;; ureide biosynthesis;;
metacyc_pathway_type Adenine-Adenosine-Salvage;; Purine-Degradation; Super-Pathways;; Purine-Degradation;; Guanine-Guanosine-Salvage; Super-Pathways;; ; Purine-Degradation;; Adenosine-Nucleotides-Degradation;; Purine-Nucleotides-Salvage;; Polyamine-Biosynthesis; Super-Pathways;;
pfam_acc PF01048;
pfam_desc Phosphorylase superfamily;
pfam_id PNP_UDP_1;
pfam_target db:Pfam-A.hmm|PF01048.20 evalue:5.7e-36 score:123.2 best_domain_score:123.0 name:PNP_UDP_1;
sprot_desc Purine nucleoside phosphorylase DeoD-type;
sprot_id sp|Q28U96|DEOD_JANSC;
sprot_target db:uniprot_sprot|sp|Q28U96|DEOD_JANSC 1 233 evalue:1.0e-101 qcov:99.10 identity:74.70;
tigrfam_acc TIGR00107;
tigrfam_desc purine nucleoside phosphorylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name deoD;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00107 evalue:3.7e-87 score:290.8 best_domain_score:290.5 name:TIGR00107;
4857 5588 CDS
ID metaerg.pl|01397
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799055.1 21 242 evalue:3.5e-66 qcov:91.40 identity:59.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
5743 6522 CDS
ID metaerg.pl|01398
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0015935;
allko_ids K02967;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799053.1 1 259 evalue:3.7e-130 qcov:100.00 identity:91.10;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00318;
pfam_desc Ribosomal protein S2;
pfam_id Ribosomal_S2;
pfam_target db:Pfam-A.hmm|PF00318.20 evalue:2.7e-94 score:313.6 best_domain_score:313.4 name:Ribosomal_S2;
sprot_desc 30S ribosomal protein S2;
sprot_id sp|A1B8E9|RS2_PARDP;
sprot_target db:uniprot_sprot|sp|A1B8E9|RS2_PARDP 1 259 evalue:1.3e-121 qcov:100.00 identity:84.20;
tigrfam_acc TIGR01011;
tigrfam_desc ribosomal protein uS2;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpsB_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01011 evalue:1.3e-97 score:324.6 best_domain_score:324.4 name:TIGR01011;
6601 7494 CDS
ID metaerg.pl|01399
allgo_ids GO:0003746; GO:0006414; GO:0005737;
allko_ids K02357;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799299.1 1 297 evalue:2.9e-147 qcov:100.00 identity:96.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00889;
pfam_desc Elongation factor TS;
pfam_id EF_TS;
pfam_target db:Pfam-A.hmm|PF00889.19 evalue:2.3e-61 score:206.3 best_domain_score:205.7 name:EF_TS;
sprot_desc Elongation factor Ts;
sprot_id sp|A4WSP1|EFTS_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WSP1|EFTS_RHOS5 1 294 evalue:1.5e-113 qcov:99.00 identity:74.50;
tigrfam_acc TIGR00116;
tigrfam_desc translation elongation factor Ts;
tigrfam_mainrole Protein synthesis;
tigrfam_name tsf;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00116 evalue:1.2e-91 score:306.2 best_domain_score:306.0 name:TIGR00116;
8622 7564 CDS
ID metaerg.pl|01400
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_E;s__Rhodobacter_E sp900105075;
genomedb_acc GCF_900105075.1;
genomedb_target db:genomedb|GCF_900105075.1|WP_092901205.1 86 347 evalue:2.6e-70 qcov:74.40 identity:54.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF13640;
pfam_desc 2OG-Fe(II) oxygenase superfamily;
pfam_id 2OG-FeII_Oxy_3;
pfam_target db:Pfam-A.hmm|PF13640.6 evalue:4.2e-10 score:39.6 best_domain_score:38.7 name:2OG-FeII_Oxy_3;
10524 8764 CDS
ID metaerg.pl|01401
allgo_ids GO:0008272; GO:0015116; GO:0016021; GO:0005887; GO:0005886; GO:0015301; GO:0008271; GO:0015293;
allko_ids K18059;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657707.1 1 583 evalue:6.4e-255 qcov:99.50 identity:81.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01740; PF00916;
pfam_desc STAS domain; Sulfate permease family;
pfam_id STAS; Sulfate_transp;
pfam_target db:Pfam-A.hmm|PF01740.21 evalue:2.9e-17 score:61.6 best_domain_score:60.9 name:STAS; db:Pfam-A.hmm|PF00916.20 evalue:1.4e-96 score:322.8 best_domain_score:322.3 name:Sulfate_transp;
sprot_desc Proton/sulfate cotransporter 2;
sprot_id sp|A8J6J0|SULT2_CHLRE;
sprot_target db:uniprot_sprot|sp|A8J6J0|SULT2_CHLRE 2 562 evalue:2.1e-66 qcov:95.70 identity:31.80;
tigrfam_acc TIGR00815;
tigrfam_desc sulfate permease;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name sulP;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00815 evalue:1.5e-129 score:432.2 best_domain_score:431.9 name:TIGR00815;
tm_num 11;
10524 8764 transmembrane_helix
ID metaerg.pl|01402
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o8836-8904i8941-9009o9052-9120i9133-9201o9277-9345i9406-9474o9547-9615i9676-9744o9787-9855i9868-9921o9979-10047i;
12752 10734 CDS
ID metaerg.pl|01403
allgo_ids GO:0007165; GO:0016020;
allko_ids K08282; K07704; K10909; K07677; K07645; K07708; K01090; K02491; K11231; K07643; K07642; K11711; K04486; K11356; K02484; K13533; K07711; K02575; K07768; K07778; K07683; K11354; K07718; K07698; K07651; K07648; K07679; K03407; K07682; K00936; K07777; K07654; K07652; K08475; K07673; K04093; K01120; K07641; K13598; K07646; K10125; K02342; K02476; K11357; K11617; K04757; K07769; K14509; K02486; K11383; K07675; K07717; K11637; K10942; K13040; K07647; K07680; K06379; K07676; K10681; K04518; K01769; K07644; K07709; K07636; K07653; K02480; K08801; K02482; K14489; K10715; K07678; K07701; K02030; K11527; K13587; K08479; K07674; K03388; K02668; K01768; K07710; K11614; K07716; K07697; K02489;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus tibetensis;
genomedb_acc GCF_900102505.1;
genomedb_target db:genomedb|GCF_900102505.1|WP_090746311.1 7 670 evalue:2.2e-214 qcov:98.80 identity:60.80;
kegg_pathway_id 03030; 05111; 00400; 00230; 00340; 00790; 03090; 02020; 04011;
kegg_pathway_name DNA replication; Vibrio cholerae pathogenic cycle; Phenylalanine, tyrosine and tryptophan biosynthesis; Purine metabolism; Histidine metabolism; Folate biosynthesis; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00015; PF00989; PF13596; PF08447; PF08448; PF12860; PF13188; PF13426;
pfam_desc Methyl-accepting chemotaxis protein (MCP) signalling domain; PAS fold; PAS domain; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain;
pfam_id MCPsignal; PAS; PAS_10; PAS_3; PAS_4; PAS_7; PAS_8; PAS_9;
pfam_target db:Pfam-A.hmm|PF00015.21 evalue:4.7e-31 score:107.1 best_domain_score:107.1 name:MCPsignal; db:Pfam-A.hmm|PF00989.25 evalue:5.3e-44 score:148.1 best_domain_score:46.8 name:PAS; db:Pfam-A.hmm|PF13596.6 evalue:4e-09 score:36.3 best_domain_score:17.6 name:PAS_10; db:Pfam-A.hmm|PF08447.12 evalue:2.4e-14 score:52.6 best_domain_score:28.9 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:2.7e-34 score:117.0 best_domain_score:37.1 name:PAS_4; db:Pfam-A.hmm|PF12860.7 evalue:7.2e-12 score:44.7 best_domain_score:16.2 name:PAS_7; db:Pfam-A.hmm|PF13188.7 evalue:1.2e-20 score:72.4 best_domain_score:24.7 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:4.7e-49 score:164.2 best_domain_score:66.4 name:PAS_9;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:5.2e-64 score:213.2 best_domain_score:91.8 name:TIGR00229;
12934 14235 CDS
ID metaerg.pl|01404
allec_ids 4.3.2.2;
allgo_ids GO:0070626; GO:0004018; GO:0044208; GO:0006189; GO:0006167;
allko_ids K01679; K01744; K01756; K01857;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245935.1 1 433 evalue:3.8e-228 qcov:100.00 identity:92.80;
kegg_pathway_id 00720; 00252; 00910; 00362; 00020; 00230;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Alanine and aspartate metabolism; Nitrogen metabolism; Benzoate degradation via hydroxylation; Citrate cycle (TCA cycle); Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id P121-PWY; DENOVOPURINE2-PWY; PWY-6124; PWY-841; PWY-6123; PRPP-PWY; PWY-6126;
metacyc_pathway_name adenine and adenosine salvage I;; superpathway of purine nucleotides de novo biosynthesis II;; inosine-5'-phosphate biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis I;; inosine-5'-phosphate biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Adenine-Adenosine-Salvage;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF10397; PF00206;
pfam_desc Adenylosuccinate lyase C-terminus; Lyase;
pfam_id ADSL_C; Lyase_1;
pfam_target db:Pfam-A.hmm|PF10397.9 evalue:1.9e-27 score:94.8 best_domain_score:93.2 name:ADSL_C; db:Pfam-A.hmm|PF00206.20 evalue:8.9e-53 score:178.9 best_domain_score:178.2 name:Lyase_1;
sprot_desc Adenylosuccinate lyase;
sprot_id sp|P12047|PUR8_BACSU;
sprot_target db:uniprot_sprot|sp|P12047|PUR8_BACSU 1 431 evalue:4.1e-128 qcov:99.50 identity:53.10;
tigrfam_acc TIGR00928;
tigrfam_desc adenylosuccinate lyase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purB;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00928 evalue:9.6e-151 score:501.6 best_domain_score:501.4 name:TIGR00928;
14620 15732 CDS
ID metaerg.pl|01405
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657706.1 2 365 evalue:6.3e-107 qcov:98.40 identity:59.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01706; PF14841; PF14842;
pfam_desc FliG C-terminal domain; FliG middle domain; FliG N-terminal domain;
pfam_id FliG_C; FliG_M; FliG_N;
pfam_target db:Pfam-A.hmm|PF01706.16 evalue:1.3e-26 score:92.1 best_domain_score:84.2 name:FliG_C; db:Pfam-A.hmm|PF14841.6 evalue:2.9e-12 score:45.9 best_domain_score:43.1 name:FliG_M; db:Pfam-A.hmm|PF14842.6 evalue:2.9e-19 score:68.8 best_domain_score:43.9 name:FliG_N;
16504 15977 CDS
ID metaerg.pl|01406
allko_ids K00677; K04042; K02536;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799149.1 1 171 evalue:3.3e-82 qcov:97.70 identity:86.50;
kegg_pathway_id 00530; 00540;
kegg_pathway_name Aminosugars metabolism; Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00132; PF14602;
pfam_desc Bacterial transferase hexapeptide (six repeats); Hexapeptide repeat of succinyl-transferase;
pfam_id Hexapep; Hexapep_2;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:1e-19 score:68.7 best_domain_score:38.5 name:Hexapep; db:Pfam-A.hmm|PF14602.6 evalue:5.5e-10 score:38.1 best_domain_score:24.7 name:Hexapep_2;
sprot_desc hypothetical protein;
sprot_id sp|P40882|Y3753_PSEAE;
sprot_target db:uniprot_sprot|sp|P40882|Y3753_PSEAE 1 175 evalue:3.8e-32 qcov:100.00 identity:58.30;
17382 16504 CDS
ID metaerg.pl|01407
allec_ids 1.1.-.-;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0051287; GO:0050661;
allko_ids K00020; K00042;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480551.1 1 291 evalue:4.9e-139 qcov:99.70 identity:82.80;
kegg_pathway_id 00280; 00630;
kegg_pathway_name Valine, leucine and isoleucine degradation; Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id GAMMAHEXCHLORDEG-PWY;
metacyc_pathway_name γ-hexachlorocyclohexane degradation;;
metacyc_pathway_type CHLORINATED-COMPOUNDS-DEG;;
pfam_acc PF02737; PF03807; PF14833; PF03446;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; NADP oxidoreductase coenzyme F420-dependent; NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id 3HCDH_N; F420_oxidored; NAD_binding_11; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF02737.18 evalue:3.6e-05 score:23.0 best_domain_score:21.9 name:3HCDH_N; db:Pfam-A.hmm|PF03807.17 evalue:3.6e-10 score:39.5 best_domain_score:38.5 name:F420_oxidored; db:Pfam-A.hmm|PF14833.6 evalue:1.2e-35 score:121.7 best_domain_score:120.5 name:NAD_binding_11; db:Pfam-A.hmm|PF03446.15 evalue:1.8e-48 score:164.0 best_domain_score:163.3 name:NAD_binding_2;
sprot_desc Uncharacterized oxidoreductase Sfri_1503;
sprot_id sp|O33730|Y1503_SHEFN;
sprot_target db:uniprot_sprot|sp|O33730|Y1503_SHEFN 1 288 evalue:2.7e-99 qcov:98.60 identity:61.50;
17479 19941 CDS
ID metaerg.pl|01408
allec_ids 3.5.1.11;
allgo_ids GO:0016787; GO:0017000; GO:0008953; GO:0046677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799154.1 1 820 evalue:0.0e+00 qcov:100.00 identity:84.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01804;
pfam_desc Penicillin amidase;
pfam_id Penicil_amidase;
pfam_target db:Pfam-A.hmm|PF01804.18 evalue:5.9e-192 score:639.4 best_domain_score:639.2 name:Penicil_amidase;
sprot_desc Penicillin acylase 2 proenzyme;
sprot_id sp|P15558|PAC2_PSES3;
sprot_target db:uniprot_sprot|sp|P15558|PAC2_PSES3 30 817 evalue:2.1e-56 qcov:96.10 identity:27.00;
tm_num 1;
17479 19941 transmembrane_helix
ID metaerg.pl|01409
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i17497-17565o;
20072 21148 CDS
ID metaerg.pl|01410
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480549.1 3 358 evalue:3.4e-150 qcov:99.40 identity:77.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
sp YES;
20072 20131 signal_peptide
ID metaerg.pl|01411
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
21271 22128 CDS
ID metaerg.pl|01412
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480548.1 1 284 evalue:9.1e-138 qcov:99.60 identity:81.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
22140 23057 CDS
ID metaerg.pl|01413
allec_ids 2.3.1.31; 2.3.1.46;
allgo_ids GO:0005737; GO:0004414; GO:0008899; GO:0019281;
allko_ids K00651;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799160.1 1 305 evalue:1.1e-160 qcov:100.00 identity:88.20;
kegg_pathway_id 00920; 00271;
kegg_pathway_name Sulfur metabolism; Methionine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-6293; METSYN-PWY; PWY-5347; PWY-5345; HOMOSER-METSYN-PWY; P4-PWY; MET-SAM-PWY; PWY-821; PWY0-781; PWY-5344;
metacyc_pathway_name superpathway of L-cysteine biosynthesis (fungi);; superpathway of L-homoserine and L-methionine biosynthesis;; superpathway of L-methionine biosynthesis (transsulfuration);; superpathway of L-methionine biosynthesis (by sulfhydrylation);; L-methionine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of S-adenosyl-L-methionine biosynthesis;; superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae);; aspartate superpathway;; L-homocysteine biosynthesis;;
metacyc_pathway_type CYSTEINE-SYN; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; Other-Amino-Acid-Biosynthesis;;
pfam_acc PF04204;
pfam_desc Homoserine O-succinyltransferase;
pfam_id HTS;
pfam_target db:Pfam-A.hmm|PF04204.16 evalue:1.8e-127 score:423.6 best_domain_score:423.4 name:HTS;
sprot_desc Homoserine O-acetyltransferase;
sprot_id sp|Q165M8|METAA_ROSDO;
sprot_target db:uniprot_sprot|sp|Q165M8|METAA_ROSDO 1 305 evalue:1.3e-149 qcov:100.00 identity:79.30;
tigrfam_acc TIGR01001;
tigrfam_desc homoserine O-succinyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name metA;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01001 evalue:1.2e-106 score:355.9 best_domain_score:355.7 name:TIGR01001;
23122 23988 CDS
ID metaerg.pl|01414
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657713.1 1 284 evalue:9.5e-119 qcov:98.60 identity:75.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00561; PF12697; PF12146; PF06821;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33; Serine hydrolase;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4; Ser_hydrolase;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:6.2e-22 score:77.7 best_domain_score:72.7 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:2.8e-22 score:79.7 best_domain_score:79.4 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:1.6e-17 score:62.8 best_domain_score:60.0 name:Hydrolase_4; db:Pfam-A.hmm|PF06821.13 evalue:7.8e-05 score:21.8 best_domain_score:17.8 name:Ser_hydrolase;
25854 24046 CDS
ID metaerg.pl|01415
allec_ids 3.4.24.-;
allgo_ids GO:0004222; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799161.1 1 600 evalue:0.0e+00 qcov:99.70 identity:90.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01432; PF08439;
pfam_desc Peptidase family M3; Oligopeptidase F;
pfam_id Peptidase_M3; Peptidase_M3_N;
pfam_target db:Pfam-A.hmm|PF01432.20 evalue:8.5e-34 score:116.8 best_domain_score:109.0 name:Peptidase_M3; db:Pfam-A.hmm|PF08439.10 evalue:1.7e-18 score:65.9 best_domain_score:64.5 name:Peptidase_M3_N;
tigrfam_acc TIGR02290;
tigrfam_desc oligoendopeptidase, pepF/M3 family;
tigrfam_name M3_fam_3;
tigrfam_target db:TIGRFAMs.hmm|TIGR02290 evalue:2e-186 score:620.6 best_domain_score:620.4 name:TIGR02290;
26202 25912 CDS
ID metaerg.pl|01416
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657714.1 1 96 evalue:2.0e-33 qcov:100.00 identity:71.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF14333;
pfam_desc Domain of unknown function (DUF4389);
pfam_id DUF4389;
pfam_target db:Pfam-A.hmm|PF14333.6 evalue:8.9e-25 score:85.7 best_domain_score:85.5 name:DUF4389;
tm_num 1;
26202 25912 transmembrane_helix
ID metaerg.pl|01417
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o25984-26052i;
27307 26216 CDS
ID metaerg.pl|01418
allec_ids 2.7.1.170;
allgo_ids GO:0005524; GO:0006040; GO:0009254; GO:0016773; GO:0016301; GO:0097175; GO:0005975;
allko_ids K09001;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799162.1 1 363 evalue:2.1e-179 qcov:100.00 identity:85.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF03702;
pfam_desc Anhydro-N-acetylmuramic acid kinase;
pfam_id AnmK;
pfam_target db:Pfam-A.hmm|PF03702.14 evalue:1.5e-67 score:227.5 best_domain_score:225.9 name:AnmK;
sprot_desc Anhydro-N-acetylmuramic acid kinase;
sprot_id sp|Q3J3I2|ANMK_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J3I2|ANMK_RHOS4 1 363 evalue:4.9e-119 qcov:100.00 identity:60.70;
27373 28623 CDS
ID metaerg.pl|01419
allec_ids 6.1.1.1;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0003723; GO:0004831; GO:0006437;
allko_ids K01866;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799163.1 1 415 evalue:2.1e-220 qcov:99.80 identity:91.60;
kegg_pathway_id 00970; 00400;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00579;
pfam_desc tRNA synthetases class I (W and Y);
pfam_id tRNA-synt_1b;
pfam_target db:Pfam-A.hmm|PF00579.25 evalue:2.2e-75 score:253.0 best_domain_score:252.6 name:tRNA-synt_1b;
sprot_desc Tyrosine--tRNA ligase;
sprot_id sp|A8LQM0|SYY_DINSH;
sprot_target db:uniprot_sprot|sp|A8LQM0|SYY_DINSH 1 416 evalue:1.0e-200 qcov:100.00 identity:81.00;
tigrfam_acc TIGR00234;
tigrfam_desc tyrosine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name tyrS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00234 evalue:4.7e-107 score:357.7 best_domain_score:357.4 name:TIGR00234;
29406 28630 CDS
ID metaerg.pl|01420
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799094.1 1 258 evalue:7.3e-110 qcov:100.00 identity:83.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01925;
pfam_desc Sulfite exporter TauE/SafE;
pfam_id TauE;
pfam_target db:Pfam-A.hmm|PF01925.19 evalue:1.8e-25 score:89.2 best_domain_score:88.9 name:TauE;
tm_num 8;
29406 28630 transmembrane_helix
ID metaerg.pl|01421
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o28672-28740i28759-28824o28867-28935i28948-29007o29065-29133i29152-29220o29248-29307i29326-29382o;
30854 29406 CDS
ID metaerg.pl|01422
allec_ids 1.1.1.205;
allgo_ids GO:0003824; GO:0055114; GO:0003938; GO:0046872; GO:0000166; GO:0006177;
allko_ids K00088; K05847; K00970; K00974; K01697; K00364;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799097.1 1 482 evalue:2.5e-252 qcov:100.00 identity:95.40;
kegg_pathway_id 00983; 02010; 00450; 00271; 00230; 00260;
kegg_pathway_name Drug metabolism - other enzymes; ABC transporters - General; Selenoamino acid metabolism; Methionine metabolism; Purine metabolism; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-841; PWY-6353; PWY-5695; PRPP-PWY; PWY-5044; P121-PWY; PWY-6125; URSIN-PWY; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis I;; purine nucleotides degradation II (aerobic);; inosine 5'-phosphate degradation;; superpathway of histidine, purine, and pyrimidine biosynthesis;; purine nucleotides degradation I (plants);; adenine and adenosine salvage I;; superpathway of guanosine nucleotides de novo biosynthesis II;; ureide biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Degradation; Super-Pathways;; Purine-Degradation;; Super-Pathways;; Purine-Degradation; Super-Pathways;; Adenine-Adenosine-Salvage;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00571; PF00478; PF03060;
pfam_desc CBS domain; IMP dehydrogenase / GMP reductase domain; Nitronate monooxygenase;
pfam_id CBS; IMPDH; NMO;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:1.4e-18 score:66.3 best_domain_score:40.8 name:CBS; db:Pfam-A.hmm|PF00478.25 evalue:1.1e-154 score:513.9 best_domain_score:513.7 name:IMPDH; db:Pfam-A.hmm|PF03060.15 evalue:2.5e-13 score:49.4 best_domain_score:33.5 name:NMO;
sprot_desc Inosine-5'-monophosphate dehydrogenase;
sprot_id sp|Q9KH33|IMDH_RHITR;
sprot_target db:uniprot_sprot|sp|Q9KH33|IMDH_RHITR 5 473 evalue:1.3e-156 qcov:97.30 identity:61.70;
tigrfam_acc TIGR01302;
tigrfam_desc inosine-5'-monophosphate dehydrogenase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name IMP_dehydrog;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01302 evalue:1.2e-179 score:597.1 best_domain_score:596.9 name:TIGR01302;
31881 30928 CDS
ID metaerg.pl|01423
allgo_ids GO:0016021; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480858.1 1 317 evalue:2.3e-118 qcov:100.00 identity:72.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF03595;
pfam_desc Voltage-dependent anion channel;
pfam_id SLAC1;
pfam_target db:Pfam-A.hmm|PF03595.17 evalue:3.4e-15 score:55.3 best_domain_score:54.8 name:SLAC1;
tm_num 10;
31881 30928 transmembrane_helix
ID metaerg.pl|01424
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o30970-31038i31057-31113o31156-31224i31243-31311o31339-31407i31426-31479o31522-31581i31594-31662o31672-31740i31759-31827o;
32581 31922 CDS
ID metaerg.pl|01425
allec_ids 3.1.3.18;
allgo_ids GO:0046872; GO:0008967; GO:0046295; GO:0019253;
allko_ids K01838; K01091;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799101.1 1 211 evalue:5.1e-88 qcov:96.30 identity:75.80;
kegg_pathway_id 00500; 00630;
kegg_pathway_name Starch and sucrose metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-181;
metacyc_pathway_name photorespiration;;
metacyc_pathway_type Photosynthesis;;
pfam_acc PF12710; PF13419; PF00702; PF08282; PF13242;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD; HAD_2; Hydrolase; Hydrolase_3; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:3.5e-14 score:52.9 best_domain_score:51.9 name:HAD; db:Pfam-A.hmm|PF13419.6 evalue:1.8e-34 score:118.6 best_domain_score:118.3 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:4.7e-21 score:75.3 best_domain_score:74.7 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:5.2e-05 score:22.3 best_domain_score:9.3 name:Hydrolase_3; db:Pfam-A.hmm|PF13242.6 evalue:2e-05 score:23.8 best_domain_score:22.7 name:Hydrolase_like;
sprot_desc Phosphoglycolate phosphatase;
sprot_id sp|A3PNX3|GPH_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PNX3|GPH_RHOS1 4 216 evalue:4.2e-41 qcov:97.30 identity:43.70;
tigrfam_acc TIGR01449; TIGR01509; TIGR01549;
tigrfam_desc phosphoglycolate phosphatase, bacterial; HAD hydrolase, family IA, variant 3; HAD hydrolase, family IA, variant 1;
tigrfam_mainrole Energy metabolism; Unknown function; Unknown function;
tigrfam_name PGP_bact; HAD-SF-IA-v3; HAD-SF-IA-v1;
tigrfam_sub1role Sugars; Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01449 evalue:2.2e-59 score:199.7 best_domain_score:199.5 name:TIGR01449; db:TIGRFAMs.hmm|TIGR01509 evalue:3.7e-09 score:36.1 best_domain_score:23.5 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01549 evalue:4.7e-12 score:45.7 best_domain_score:33.5 name:TIGR01549;
33276 32578 CDS
ID metaerg.pl|01426
allec_ids 5.1.3.1;
allgo_ids GO:0005975; GO:0016857; GO:0046872; GO:0004750; GO:0006098; GO:0019253;
allko_ids K01783;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799103.1 1 232 evalue:4.5e-119 qcov:100.00 identity:90.10;
kegg_pathway_id 00030; 00710; 00040;
kegg_pathway_name Pentose phosphate pathway; Carbon fixation in photosynthetic organisms; Pentose and glucuronate interconversions;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id CALVIN-PWY; DARABCAT-PWY; PENTOSE-P-PWY; P21-PWY; P122-PWY; RIBITOLUTIL-PWY; PWY-1861; P185-PWY; NONOXIPENT-PWY; P124-PWY; PHOTOALL-PWY; PWY-5723;
metacyc_pathway_name Calvin-Benson-Bassham cycle;; D-arabinose degradation II;; pentose phosphate pathway;; pentose phosphate pathway (partial);; heterolactic fermentation;; ribitol degradation;; formaldehyde assimilation II (assimilatory RuMP Cycle);; formaldehyde assimilation III (dihydroxyacetone cycle);; pentose phosphate pathway (non-oxidative branch);; Bifidobacterium shunt;; oxygenic photosynthesis;; Rubisco shunt;;
metacyc_pathway_type Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; D-Arabinose-Degradation;; Pentose-Phosphate-Cycle; Super-Pathways;; Pentose-Phosphate-Cycle;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; SUGAR-ALCOHOLS-DEG;; Formaldehyde-Assimilation;; Formaldehyde-Assimilation;; Pentose-Phosphate-Cycle;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Photosynthesis; Super-Pathways;; Energy-Metabolism;;
pfam_acc PF00834;
pfam_desc Ribulose-phosphate 3 epimerase family;
pfam_id Ribul_P_3_epim;
pfam_target db:Pfam-A.hmm|PF00834.19 evalue:7e-74 score:246.7 best_domain_score:246.5 name:Ribul_P_3_epim;
sprot_desc Ribulose-phosphate 3-epimerase;
sprot_id sp|P51012|RPE_RHOCA;
sprot_target db:uniprot_sprot|sp|P51012|RPE_RHOCA 1 228 evalue:3.0e-93 qcov:98.30 identity:70.20;
tigrfam_acc TIGR01163;
tigrfam_desc ribulose-phosphate 3-epimerase;
tigrfam_mainrole Energy metabolism;
tigrfam_name rpe;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR01163 evalue:9.7e-78 score:259.5 best_domain_score:259.2 name:TIGR01163;
34355 33411 CDS
ID metaerg.pl|01427
allec_ids 2.8.1.8;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0016992; GO:0046872; GO:0009249;
allko_ids K03644;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468954.1 1 314 evalue:4.3e-173 qcov:100.00 identity:93.60;
kegg_pathway_id 00785;
kegg_pathway_name Lipoic acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY0-501; PWY0-1275;
metacyc_pathway_name lipoate biosynthesis and incorporation I;; lipoate biosynthesis and incorporation II;;
metacyc_pathway_type Lipoate-Biosynthesis;; Lipoate-Biosynthesis;;
pfam_acc PF16881; PF04055;
pfam_desc N-terminal domain of lipoyl synthase of Radical_SAM family; Radical SAM superfamily;
pfam_id LIAS_N; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF16881.5 evalue:5.3e-07 score:29.3 best_domain_score:28.5 name:LIAS_N; db:Pfam-A.hmm|PF04055.21 evalue:1.2e-10 score:41.2 best_domain_score:39.7 name:Radical_SAM;
sprot_desc Lipoyl synthase;
sprot_id sp|Q1GGW2|LIPA_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GGW2|LIPA_RUEST 1 313 evalue:7.2e-167 qcov:99.70 identity:88.20;
tigrfam_acc TIGR00510;
tigrfam_desc lipoyl synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name lipA;
tigrfam_sub1role Lipoate;
tigrfam_target db:TIGRFAMs.hmm|TIGR00510 evalue:1e-109 score:365.6 best_domain_score:365.4 name:TIGR00510;
35397 34447 CDS
ID metaerg.pl|01428
allgo_ids GO:0003700; GO:0006355; GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799107.1 2 312 evalue:1.0e-129 qcov:98.40 identity:79.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:1.1e-22 score:79.0 best_domain_score:79.0 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:5e-29 score:100.4 best_domain_score:99.8 name:LysR_substrate;
sprot_desc Probable hydrogen peroxide-inducible genes activator;
sprot_id sp|Q9X5P2|OXYR_STRVD;
sprot_target db:uniprot_sprot|sp|Q9X5P2|OXYR_STRVD 5 294 evalue:2.7e-41 qcov:91.80 identity:41.30;
35601 36482 CDS
ID metaerg.pl|01429
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480969.1 1 243 evalue:6.7e-19 qcov:82.90 identity:38.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
39988 36551 CDS
ID metaerg.pl|01430
allec_ids 3.6.4.-; 3.6.1.-;
allgo_ids GO:0003676; GO:0005524; GO:0005737; GO:0003684; GO:0004386; GO:0006355; GO:0000716;
allko_ids K05591; K10896; K03723;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799111.1 1 1144 evalue:0.0e+00 qcov:99.90 identity:89.90;
kegg_pathway_id 03420;
kegg_pathway_name Nucleotide excision repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-6404; PWY-5354; PWY-6502; PWY-6147; PWY-6383; FOLSYN-PWY; ALL-CHORISMATE-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ; oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; ; Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;; Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF02559; PF00270; PF00271; PF04851; PF03461; PF17757;
pfam_desc CarD-like/TRCF domain; DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TRCF domain; UvrB interaction domain;
pfam_id CarD_CdnL_TRCF; DEAD; Helicase_C; ResIII; TRCF; UvrB_inter;
pfam_target db:Pfam-A.hmm|PF02559.16 evalue:6.4e-26 score:90.1 best_domain_score:88.8 name:CarD_CdnL_TRCF; db:Pfam-A.hmm|PF00270.29 evalue:1.1e-15 score:57.1 best_domain_score:56.0 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:3.7e-17 score:61.9 best_domain_score:60.0 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:2.8e-07 score:29.9 best_domain_score:29.0 name:ResIII; db:Pfam-A.hmm|PF03461.15 evalue:1.1e-25 score:89.1 best_domain_score:87.9 name:TRCF; db:Pfam-A.hmm|PF17757.1 evalue:4e-16 score:58.2 best_domain_score:57.2 name:UvrB_inter;
sprot_desc Transcription-repair-coupling factor;
sprot_id sp|Q1RI82|MFD_RICBR;
sprot_target db:uniprot_sprot|sp|Q1RI82|MFD_RICBR 33 1118 evalue:3.8e-234 qcov:94.80 identity:41.00;
tigrfam_acc TIGR00580;
tigrfam_desc transcription-repair coupling factor;
tigrfam_mainrole DNA metabolism;
tigrfam_name mfd;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00580 evalue:3.3e-300 score:997.8 best_domain_score:997.6 name:TIGR00580;
40539 40045 CDS
ID metaerg.pl|01431
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657711.1 1 164 evalue:1.1e-58 qcov:100.00 identity:72.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
sp YES;
tm_num 4;
40045 40122 signal_peptide
ID metaerg.pl|01432
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
40539 40045 transmembrane_helix
ID metaerg.pl|01433
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o40057-40125i40237-40305o40318-40386i40447-40515o;
40805 41809 CDS
ID metaerg.pl|01434
allec_ids 1.2.1.12; 1.2.1.-;
allgo_ids GO:0016620; GO:0055114; GO:0005737; GO:0004365; GO:0051287; GO:0050661; GO:0006006; GO:0006096;
allko_ids K10705; K00134;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799113.1 1 334 evalue:1.2e-186 qcov:100.00 identity:97.00;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-5195; P461-PWY; PWY-5484; GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAGLYCOLYSIS-PWY; PWY-5464; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; P441-PWY; PWY-5482; ANARESP1-PWY; GLYCOLYSIS; PWY-321; P105-PWY; P41-PWY; PWY-6537; PWY-5305; GLYCOLYSIS-E-D; P122-PWY; 4TOLCARBDEG-PWY; PWY-5537; P124-PWY; P185-PWY; TOLSULFDEG-PWY; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; GLUCONEO-PWY;
metacyc_pathway_name artemisinin and arteannuin B biosynthesis;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; superpathway of N-acetylneuraminate degradation;; pyruvate fermentation to acetate II;; ; glycolysis I (from glucose 6-phosphate);; cutin biosynthesis;; TCA cycle IV (2-oxoglutarate decarboxylase);; pyruvate fermentation to acetate and (S)-lactate I;; 4-aminobutanoate degradation II;; bixin biosynthesis;; superpathway of glycolysis and the Entner-Doudoroff pathway;; heterolactic fermentation;; 4-toluenecarboxylate degradation;; pyruvate fermentation to acetate V;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; 4-toluenesulfonate degradation I;; 4-hydroxyphenylacetate degradation;; gluconeogenesis I;;
metacyc_pathway_type SESQUITERPENE-LACTONE;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; Pyruvate-Acetate-Fermentation;; ; GLYCOLYSIS-VARIANTS;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; TCA-VARIANTS;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; 4-Aminobutyraye-Degradation;; APOCAROTENOID-SYN;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; AROMATIC-COMPOUNDS-DEGRADATION;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; 4-Toluenesulfonate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; Gluconeogenesis;;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:2.4e-61 score:205.2 best_domain_score:204.7 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:3.6e-32 score:110.0 best_domain_score:109.0 name:Gp_dh_N;
sprot_desc Glyceraldehyde-3-phosphate dehydrogenase;
sprot_id sp|P51009|G3P_XANFL;
sprot_target db:uniprot_sprot|sp|P51009|G3P_XANFL 1 332 evalue:2.9e-126 qcov:99.40 identity:66.50;
tigrfam_acc TIGR01534;
tigrfam_desc glyceraldehyde-3-phosphate dehydrogenase, type I;
tigrfam_mainrole Energy metabolism;
tigrfam_name GAPDH-I;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01534 evalue:1.3e-121 score:405.0 best_domain_score:404.8 name:TIGR01534;
41978 42355 CDS
ID metaerg.pl|01435
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246512.1 2 125 evalue:3.7e-35 qcov:99.20 identity:62.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00581;
pfam_desc Rhodanese-like domain;
pfam_id Rhodanese;
pfam_target db:Pfam-A.hmm|PF00581.20 evalue:6.1e-09 score:35.6 best_domain_score:35.3 name:Rhodanese;
42443 43444 CDS
ID metaerg.pl|01436
allec_ids 1.2.1.12; 1.2.1.-;
allgo_ids GO:0016620; GO:0055114; GO:0005737; GO:0004365; GO:0051287; GO:0050661; GO:0006006; GO:0006096;
allko_ids K00134; K10705;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246513.1 1 333 evalue:2.4e-166 qcov:100.00 identity:87.70;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id GLYCOLYSIS; ANARESP1-PWY; P122-PWY; GLYCOLYSIS-E-D; 4TOLCARBDEG-PWY; P105-PWY; P41-PWY; PWY-5305; PWY-6537; PWY-321; TOLSULFDEG-PWY; P124-PWY; P185-PWY; PWY-5537; GLUCONEO-PWY; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; PWY-5195; PWY-5484; P461-PWY; ANAGLYCOLYSIS-PWY; PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5482; P441-PWY; ANAEROFRUCAT-PWY; PWY-1042; PWY-3801;
metacyc_pathway_name glycolysis I (from glucose 6-phosphate);; ; heterolactic fermentation;; superpathway of glycolysis and the Entner-Doudoroff pathway;; 4-toluenecarboxylate degradation;; TCA cycle IV (2-oxoglutarate decarboxylase);; pyruvate fermentation to acetate and (S)-lactate I;; bixin biosynthesis;; 4-aminobutanoate degradation II;; cutin biosynthesis;; 4-toluenesulfonate degradation I;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; pyruvate fermentation to acetate V;; gluconeogenesis I;; 4-hydroxyphenylacetate degradation;; artemisinin and arteannuin B biosynthesis;; glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; pyruvate fermentation to acetate II;; superpathway of N-acetylneuraminate degradation;; homolactic fermentation;; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);;
metacyc_pathway_type GLYCOLYSIS-VARIANTS;; ; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; TCA-VARIANTS;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; APOCAROTENOID-SYN;; 4-Aminobutyraye-Degradation;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; 4-Toluenesulfonate-Degradation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Gluconeogenesis;; AROMATIC-COMPOUNDS-DEGRADATION;; SESQUITERPENE-LACTONE;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Pyruvate-Acetate-Fermentation;; CARBOXYLATES-DEG; Super-Pathways;; Fermentation-to-Lactate; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:4.1e-66 score:220.7 best_domain_score:220.3 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:3.6e-33 score:113.2 best_domain_score:112.1 name:Gp_dh_N;
sprot_desc Glyceraldehyde-3-phosphate dehydrogenase;
sprot_id sp|P29272|G3P_RHOSH;
sprot_target db:uniprot_sprot|sp|P29272|G3P_RHOSH 1 331 evalue:3.2e-141 qcov:99.40 identity:73.80;
tigrfam_acc TIGR01534;
tigrfam_desc glyceraldehyde-3-phosphate dehydrogenase, type I;
tigrfam_mainrole Energy metabolism;
tigrfam_name GAPDH-I;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01534 evalue:8.8e-127 score:422.0 best_domain_score:421.8 name:TIGR01534;
43947 43567 CDS
ID metaerg.pl|01437
allgo_ids GO:0000160;
allko_ids K14489; K02482; K02480; K07638; K07653; K07636; K11527; K07678; K10715; K02668; K03388; K07674; K08479; K10916; K07697; K02489; K07716; K07710; K11383; K13761; K02486; K12767; K07769; K04757; K11357; K10125; K07647; K07717; K07675; K01769; K07676; K10681; K06379; K07709; K07644; K11354; K07778; K07768; K00873; K07711; K02478; K07679; K07648; K07651; K07718; K07654; K07682; K00936; K03407; K07637; K07646; K07641; K01120; K07673; K08475; K07639; K07652; K07645; K07708; K07677; K07704; K10909; K08282; K01937; K11231; K11711; K07642; K02484; K11356; K11640;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sp000787695;
genomedb_acc GCF_000787695.1;
genomedb_target db:genomedb|GCF_000787695.1|WP_042251226.1 6 118 evalue:1.6e-33 qcov:89.70 identity:65.50;
kegg_pathway_id 00710; 00010; 00240; 05111; 00230; 00620; 03090; 02020; 04011; 00790;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:3.3e-28 score:97.3 best_domain_score:97.2 name:Response_reg;
sprot_desc Uncharacterized 14.6 kDa protein in sodA1 3'region;
sprot_id sp|P51586|YSO1_LEPBY;
sprot_target db:uniprot_sprot|sp|P51586|YSO1_LEPBY 1 108 evalue:6.1e-08 qcov:85.70 identity:34.90;
45571 43961 CDS
ID metaerg.pl|01438
allgo_ids GO:0000155; GO:0007165;
allko_ids K07717; K07675; K10942; K13040; K07647; K11357; K10125; K11629; K04757; K11520; K07769; K14509; K11383; K02486; K12767; K07644; K13532; K07709; K10681; K07676; K06379; K07650; K01769; K07678; K10715; K13587; K02030; K11527; K07636; K07653; K07638; K02480; K14489; K02482; K08801; K01768; K07656; K07640; K07710; K07716; K07697; K02489; K10916; K08479; K07674; K03388; K02668; K02491; K07643; K11231; K08282; K10909; K07704; K07645; K07708; K07677; K11640; K11356; K02484; K07642; K11711; K07698; K07718; K07651; K07648; K02478; K07679; K11328; K13533; K07711; K00873; K07768; K11633; K11354; K07778; K07652; K07673; K07639; K08475; K07646; K13598; K07641; K07637; K03407; K07649; K07682; K00936; K07654;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sp000787695;
genomedb_acc GCF_000787695.1;
genomedb_target db:genomedb|GCF_000787695.1|WP_052650347.1 12 523 evalue:1.0e-137 qcov:95.50 identity:52.50;
kegg_pathway_id 05111; 00230; 00010; 00710; 00790; 03090; 00620; 04011; 02020;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Folate biosynthesis; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF02518; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:7.8e-26 score:90.0 best_domain_score:89.2 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:6.4e-16 score:57.4 best_domain_score:56.2 name:HisKA;
tm_num 2;
45571 43961 transmembrane_helix
ID metaerg.pl|01439
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o44003-44071i44723-44791o;
46526 45870 CDS
ID metaerg.pl|01440
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796341.1 1 217 evalue:1.9e-103 qcov:99.50 identity:91.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:4.8e-20 score:71.5 best_domain_score:71.5 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:1.4e-14 score:52.7 best_domain_score:51.0 name:GntR;
46681 47850 CDS
ID metaerg.pl|01441
allec_ids 1.1.-.-;
allgo_ids GO:0016491; GO:0005886; GO:0010181; GO:0004457; GO:0019516;
allko_ids K00101;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796339.1 1 389 evalue:1.4e-210 qcov:100.00 identity:92.50;
kegg_pathway_id 00620;
kegg_pathway_name Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id GAMMAHEXCHLORDEG-PWY;
metacyc_pathway_name γ-hexachlorocyclohexane degradation;;
metacyc_pathway_type CHLORINATED-COMPOUNDS-DEG;;
pfam_acc PF01070; PF01645; PF03060;
pfam_desc FMN-dependent dehydrogenase; Conserved region in glutamate synthase; Nitronate monooxygenase;
pfam_id FMN_dh; Glu_synthase; NMO;
pfam_target db:Pfam-A.hmm|PF01070.18 evalue:1.6e-127 score:424.5 best_domain_score:424.4 name:FMN_dh; db:Pfam-A.hmm|PF01645.17 evalue:0.00011 score:20.7 best_domain_score:19.9 name:Glu_synthase; db:Pfam-A.hmm|PF03060.15 evalue:5e-07 score:28.7 best_domain_score:27.3 name:NMO;
sprot_desc L-lactate dehydrogenase;
sprot_id sp|Q7VPI9|LLDD_HAEDU;
sprot_target db:uniprot_sprot|sp|Q7VPI9|LLDD_HAEDU 3 371 evalue:5.2e-90 qcov:94.90 identity:44.30;
48010 48624 CDS
ID metaerg.pl|01442
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0008097;
allko_ids K02897;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480798.1 1 202 evalue:1.1e-97 qcov:99.00 identity:90.60;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01386; PF14693;
pfam_desc Ribosomal L25p family; Ribosomal protein TL5, C-terminal domain;
pfam_id Ribosomal_L25p; Ribosomal_TL5_C;
pfam_target db:Pfam-A.hmm|PF01386.19 evalue:2.9e-20 score:71.8 best_domain_score:71.1 name:Ribosomal_L25p; db:Pfam-A.hmm|PF14693.6 evalue:5.7e-22 score:77.1 best_domain_score:76.3 name:Ribosomal_TL5_C;
sprot_desc 50S ribosomal protein L25;
sprot_id sp|Q1GK67|RL25_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GK67|RL25_RUEST 1 203 evalue:9.0e-78 qcov:99.50 identity:73.20;
tigrfam_acc TIGR00731;
tigrfam_desc ribosomal protein bL25, Ctc-form;
tigrfam_mainrole Protein synthesis;
tigrfam_name bL25_bact_ctc;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00731 evalue:1.6e-35 score:121.6 best_domain_score:121.4 name:TIGR00731;
49000 48680 CDS
ID metaerg.pl|01443
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796337.1 1 104 evalue:4.2e-48 qcov:98.10 identity:86.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF03992;
pfam_desc Antibiotic biosynthesis monooxygenase;
pfam_id ABM;
pfam_target db:Pfam-A.hmm|PF03992.16 evalue:2.6e-18 score:65.1 best_domain_score:64.9 name:ABM;
49220 49897 CDS
ID metaerg.pl|01444
allec_ids 3.1.1.29;
allgo_ids GO:0004045; GO:0005737; GO:0006412;
allko_ids K01056;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__GCA-2747325;s__GCA-2747325 sp002747325;
genomedb_acc GCA_002747325.1;
genomedb_target db:genomedb|GCA_002747325.1|PID36155.1 1 225 evalue:3.9e-91 qcov:100.00 identity:74.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01195;
pfam_desc Peptidyl-tRNA hydrolase;
pfam_id Pept_tRNA_hydro;
pfam_target db:Pfam-A.hmm|PF01195.19 evalue:5.7e-54 score:181.9 best_domain_score:181.6 name:Pept_tRNA_hydro;
sprot_desc Peptidyl-tRNA hydrolase;
sprot_id sp|B9KMG1|PTH_RHOSK;
sprot_target db:uniprot_sprot|sp|B9KMG1|PTH_RHOSK 1 225 evalue:1.1e-76 qcov:100.00 identity:70.70;
tigrfam_acc TIGR00447;
tigrfam_desc aminoacyl-tRNA hydrolase;
tigrfam_mainrole Protein synthesis;
tigrfam_name pth;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00447 evalue:2.8e-54 score:182.8 best_domain_score:182.5 name:TIGR00447;
49894 50931 CDS
ID metaerg.pl|01445
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657523.1 1 345 evalue:1.9e-113 qcov:100.00 identity:59.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF10094;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2332);
pfam_id DUF2332;
pfam_target db:Pfam-A.hmm|PF10094.9 evalue:1.3e-71 score:241.1 best_domain_score:240.9 name:DUF2332;
50994 51377 CDS
ID metaerg.pl|01446
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796334.1 1 125 evalue:6.2e-54 qcov:98.40 identity:80.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF09996;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2237);
pfam_id DUF2237;
pfam_target db:Pfam-A.hmm|PF09996.9 evalue:4.9e-52 score:174.0 best_domain_score:173.8 name:DUF2237;
51883 51356 CDS
ID metaerg.pl|01447
allgo_ids GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796333.1 1 166 evalue:3.1e-64 qcov:94.90 identity:81.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00196;
pfam_desc Bacterial regulatory proteins, luxR family;
pfam_id GerE;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:1.5e-07 score:30.1 best_domain_score:29.3 name:GerE;
tm_num 2;
51883 51356 transmembrane_helix
ID metaerg.pl|01448
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i51368-51436o51494-51547i;
52312 51947 CDS
ID metaerg.pl|01449
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796332.1 9 121 evalue:8.3e-32 qcov:93.40 identity:67.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
sp YES;
51947 52033 signal_peptide
ID metaerg.pl|01450
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
53888 52662 CDS
ID metaerg.pl|01451
allec_ids 4.2.1.20;
allgo_ids GO:0004834;
allko_ids K06001; K01817; K01754; K01694; K01696; K01695;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480803.1 1 408 evalue:1.2e-239 qcov:100.00 identity:97.50;
kegg_pathway_id 02020; 00290; 00260; 00400;
kegg_pathway_name Two-component system - General; Valine, leucine and isoleucine biosynthesis; Glycine, serine and threonine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; TRPSYN-PWY;
metacyc_pathway_name superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; L-tryptophan biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; TRYPTOPHAN-BIOSYNTHESIS;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:3.4e-44 score:150.7 best_domain_score:150.4 name:PALP;
sprot_desc Tryptophan synthase beta chain;
sprot_id sp|Q161H9|TRPB_ROSDO;
sprot_target db:uniprot_sprot|sp|Q161H9|TRPB_ROSDO 1 407 evalue:6.1e-219 qcov:99.80 identity:87.20;
tigrfam_acc TIGR00263;
tigrfam_desc tryptophan synthase, beta subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpB;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00263 evalue:8.1e-197 score:653.0 best_domain_score:652.9 name:TIGR00263;
54555 53965 CDS
ID metaerg.pl|01452
allec_ids 3.4.23.-;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796330.1 1 196 evalue:8.3e-74 qcov:100.00 identity:70.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF13650; PF13975;
pfam_desc Aspartyl protease; gag-polyprotein putative aspartyl protease;
pfam_id Asp_protease_2; gag-asp_proteas;
pfam_target db:Pfam-A.hmm|PF13650.6 evalue:3.9e-15 score:55.5 best_domain_score:54.9 name:Asp_protease_2; db:Pfam-A.hmm|PF13975.6 evalue:2.2e-18 score:65.9 best_domain_score:65.4 name:gag-asp_proteas;
tigrfam_acc TIGR02281;
tigrfam_desc clan AA aspartic protease, TIGR02281 family;
tigrfam_mainrole Protein fate;
tigrfam_name clan_AA_DTGA;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02281 evalue:7.9e-32 score:109.1 best_domain_score:108.7 name:TIGR02281;
tm_num 2;
54555 53965 transmembrane_helix
ID metaerg.pl|01453
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o53992-54045i54082-54135o;
55785 54619 CDS
ID metaerg.pl|01454
allec_ids 1.14.13.24;
allgo_ids GO:0016491; GO:0055114; GO:0018669; GO:0071949; GO:0019439;
allko_ids K00480; K22270;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796329.1 1 388 evalue:2.0e-172 qcov:100.00 identity:79.10;
kegg_pathway_id 00624; 00626;
kegg_pathway_name 1- and 2-Methylnaphthalene degradation; Naphthalene and anthracene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-6228; M-CRESOL-DEGRADATION-PWY;
metacyc_pathway_name 3-chlorobenzoate degradation III (via gentisate);; m-cresol degradation;;
metacyc_pathway_type 3-Chlorobenzoate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;;
pfam_acc PF01266; PF00890; PF01494; PF01134; PF13450; PF07992;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; FAD binding domain; Glucose inhibited division protein A; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id DAO; FAD_binding_2; FAD_binding_3; GIDA; NAD_binding_8; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:1e-06 score:27.8 best_domain_score:26.7 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.3e-06 score:27.0 best_domain_score:27.0 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:1.8e-28 score:99.0 best_domain_score:98.5 name:FAD_binding_3; db:Pfam-A.hmm|PF01134.22 evalue:2.2e-05 score:22.9 best_domain_score:22.5 name:GIDA; db:Pfam-A.hmm|PF13450.6 evalue:2.5e-06 score:26.9 best_domain_score:26.9 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:1.4e-07 score:30.3 best_domain_score:22.9 name:Pyr_redox_2;
sprot_desc 3-hydroxybenzoate 6-hydroxylase;
sprot_id sp|Q3S4B7|3HBH_POLNA;
sprot_target db:uniprot_sprot|sp|Q3S4B7|3HBH_POLNA 6 349 evalue:5.2e-34 qcov:88.70 identity:32.30;
tm_num 1;
55785 54619 transmembrane_helix
ID metaerg.pl|01455
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i54631-54690o;
56328 55858 CDS
ID metaerg.pl|01456
allgo_ids GO:0008270; GO:0005737; GO:0010468;
allko_ids K06204;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796403.1 17 156 evalue:4.6e-67 qcov:89.70 identity:95.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01258;
pfam_desc Prokaryotic dksA/traR C4-type zinc finger;
pfam_id zf-dskA_traR;
pfam_target db:Pfam-A.hmm|PF01258.17 evalue:1.5e-07 score:30.5 best_domain_score:29.5 name:zf-dskA_traR;
sprot_desc RNA polymerase-binding transcription factor DksA;
sprot_id sp|P0CAU3|DKSA_CAUVC;
sprot_target db:uniprot_sprot|sp|P0CAU3|DKSA_CAUVC 26 156 evalue:8.2e-47 qcov:84.00 identity:69.50;
tigrfam_acc TIGR02420;
tigrfam_desc RNA polymerase-binding protein DksA;
tigrfam_mainrole Regulatory functions;
tigrfam_name dksA;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02420 evalue:8.4e-42 score:141.2 best_domain_score:140.9 name:TIGR02420;
56520 57362 CDS
ID metaerg.pl|01457
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796328.1 1 280 evalue:3.1e-146 qcov:100.00 identity:92.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00004; PF07724; PF13401; PF07728; PF00158;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); AAA domain; AAA domain (dynein-related subfamily); Sigma-54 interaction domain;
pfam_id AAA; AAA_2; AAA_22; AAA_5; Sigma54_activat;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1.6e-14 score:53.7 best_domain_score:53.0 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:1.5e-06 score:27.7 best_domain_score:27.2 name:AAA_2; db:Pfam-A.hmm|PF13401.6 evalue:1.3e-06 score:27.9 best_domain_score:26.1 name:AAA_22; db:Pfam-A.hmm|PF07728.14 evalue:5.4e-12 score:45.1 best_domain_score:44.2 name:AAA_5; db:Pfam-A.hmm|PF00158.26 evalue:9.8e-07 score:27.9 best_domain_score:12.9 name:Sigma54_activat;
57364 57816 CDS
ID metaerg.pl|01458
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796327.1 4 149 evalue:5.0e-63 qcov:97.30 identity:76.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00583; PF13673; PF13508;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.6e-13 score:50.1 best_domain_score:49.9 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:5.2e-06 score:25.7 best_domain_score:25.2 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:9.9e-08 score:31.6 best_domain_score:31.1 name:Acetyltransf_7;
57813 59174 CDS
ID metaerg.pl|01459
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796326.1 8 452 evalue:1.7e-186 qcov:98.20 identity:74.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF11150;
pfam_desc Protein of unknown function (DUF2927);
pfam_id DUF2927;
pfam_target db:Pfam-A.hmm|PF11150.8 evalue:2.8e-40 score:137.9 best_domain_score:137.4 name:DUF2927;
sp YES;
57813 57857 lipoprotein_signal_peptide
ID metaerg.pl|01460
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
59369 60553 CDS
ID metaerg.pl|01461
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796325.1 1 394 evalue:7.2e-218 qcov:100.00 identity:90.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF05762;
pfam_desc VWA domain containing CoxE-like protein;
pfam_id VWA_CoxE;
pfam_target db:Pfam-A.hmm|PF05762.14 evalue:2.5e-09 score:36.1 best_domain_score:33.8 name:VWA_CoxE;
60694 61089 CDS
ID metaerg.pl|01462
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468885.1 1 126 evalue:1.9e-29 qcov:96.20 identity:63.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF13767;
pfam_desc Domain of unknown function (DUF4168);
pfam_id DUF4168;
pfam_target db:Pfam-A.hmm|PF13767.6 evalue:4.5e-09 score:36.6 best_domain_score:36.2 name:DUF4168;
sp YES;
tm_num 1;
60694 60777 signal_peptide
ID metaerg.pl|01463
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
60694 61089 transmembrane_helix
ID metaerg.pl|01464
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i60712-60780o;
61767 61153 CDS
ID metaerg.pl|01465
allec_ids 5.2.1.8;
allgo_ids GO:0000413; GO:0003755; GO:0042597; GO:0006457;
allko_ids K01802;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657522.1 1 204 evalue:1.9e-97 qcov:100.00 identity:86.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00160;
pfam_desc Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;
pfam_id Pro_isomerase;
pfam_target db:Pfam-A.hmm|PF00160.21 evalue:4.1e-43 score:146.6 best_domain_score:146.4 name:Pro_isomerase;
sp YES;
sprot_desc Probable peptidyl-prolyl cis-trans isomerase;
sprot_id sp|Q8YHB5|PPI1_BRUME;
sprot_target db:uniprot_sprot|sp|Q8YHB5|PPI1_BRUME 52 204 evalue:1.2e-37 qcov:75.00 identity:52.30;
tm_num 1;
61153 61242 signal_peptide
ID metaerg.pl|01466
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
61767 61153 transmembrane_helix
ID metaerg.pl|01467
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i61165-61221o;
62266 61760 CDS
ID metaerg.pl|01468
allec_ids 5.2.1.8;
allgo_ids GO:0000413; GO:0003755; GO:0042597; GO:0006457;
allko_ids K01802;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796323.1 1 168 evalue:2.5e-87 qcov:100.00 identity:95.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00160;
pfam_desc Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;
pfam_id Pro_isomerase;
pfam_target db:Pfam-A.hmm|PF00160.21 evalue:1.2e-43 score:148.4 best_domain_score:148.2 name:Pro_isomerase;
sprot_desc Probable peptidyl-prolyl cis-trans isomerase;
sprot_id sp|Q8YHB5|PPI1_BRUME;
sprot_target db:uniprot_sprot|sp|Q8YHB5|PPI1_BRUME 2 167 evalue:4.7e-48 qcov:98.80 identity:56.70;
62407 63600 CDS
ID metaerg.pl|01469
allec_ids 2.7.2.3;
allgo_ids GO:0004618; GO:0006096; GO:0005737; GO:0005524;
allko_ids K00927;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796401.1 1 397 evalue:7.6e-183 qcov:100.00 identity:84.60;
kegg_pathway_id 00710; 00010;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PHOTOALL-PWY; GLUCONEO-PWY; P124-PWY; P185-PWY; GLYCOLYSIS-E-D; P122-PWY; GLYCOLYSIS; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; P441-PWY; ANAGLYCOLYSIS-PWY; PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; P461-PWY; PWY-5484; CALVIN-PWY;
metacyc_pathway_name oxygenic photosynthesis;; gluconeogenesis I;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; superpathway of glycolysis and the Entner-Doudoroff pathway;; heterolactic fermentation;; glycolysis I (from glucose 6-phosphate);; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; superpathway of N-acetylneuraminate degradation;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; Calvin-Benson-Bassham cycle;;
metacyc_pathway_type Photosynthesis; Super-Pathways;; Gluconeogenesis;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;;
pfam_acc PF00162;
pfam_desc Phosphoglycerate kinase;
pfam_id PGK;
pfam_target db:Pfam-A.hmm|PF00162.19 evalue:3e-142 score:473.3 best_domain_score:473.1 name:PGK;
sprot_desc Phosphoglycerate kinase;
sprot_id sp|A4WRI4|PGK_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WRI4|PGK_RHOS5 1 394 evalue:1.6e-155 qcov:99.20 identity:72.40;
63606 63821 CDS
ID metaerg.pl|01470
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246610.1 1 71 evalue:3.6e-19 qcov:100.00 identity:67.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
tm_num 2;
63606 63821 transmembrane_helix
ID metaerg.pl|01471
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o63615-63683i63744-63812o;
63921 64217 CDS
ID metaerg.pl|01472
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796321.1 1 98 evalue:4.8e-38 qcov:100.00 identity:84.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF04977;
pfam_desc Septum formation initiator;
pfam_id DivIC;
pfam_target db:Pfam-A.hmm|PF04977.15 evalue:1.1e-10 score:40.4 best_domain_score:40.1 name:DivIC;
tm_num 1;
63921 64217 transmembrane_helix
ID metaerg.pl|01473
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i63939-64007o;
64523 64771 CDS
ID metaerg.pl|01474
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796320.1 2 82 evalue:7.6e-13 qcov:98.80 identity:56.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
65722 65246 CDS
ID metaerg.pl|01475
allec_ids 3.1.-.-;
allgo_ids GO:0006364; GO:0005737; GO:0004518; GO:0000967;
allko_ids K07447;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798932.1 1 157 evalue:2.9e-69 qcov:99.40 identity:88.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF03652;
pfam_desc Holliday junction resolvase;
pfam_id RuvX;
pfam_target db:Pfam-A.hmm|PF03652.15 evalue:3.2e-42 score:143.4 best_domain_score:143.1 name:RuvX;
sprot_desc Putative pre-16S rRNA nuclease;
sprot_id sp|Q1GI16|YQGF_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GI16|YQGF_RUEST 3 156 evalue:1.2e-56 qcov:97.50 identity:73.40;
tigrfam_acc TIGR00250;
tigrfam_desc putative transcription antitermination factor YqgF;
tigrfam_mainrole Unknown function;
tigrfam_name RNAse_H_YqgF;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00250 evalue:3e-34 score:117.0 best_domain_score:116.8 name:TIGR00250;
66996 65722 CDS
ID metaerg.pl|01476
allgo_ids GO:0016021; GO:0005886; GO:0017004;
allko_ids K02200;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798929.1 1 424 evalue:1.1e-179 qcov:100.00 identity:78.30;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
sprot_desc Cytochrome c-type biogenesis protein CycH;
sprot_id sp|P45399|CYCH_BRADU;
sprot_target db:uniprot_sprot|sp|P45399|CYCH_BRADU 10 421 evalue:2.9e-30 qcov:97.20 identity:28.70;
tigrfam_acc TIGR03142;
tigrfam_desc cytochrome c-type biogenesis protein CcmI;
tigrfam_mainrole Energy metabolism;
tigrfam_name cytochro_ccmI;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR03142 evalue:7.5e-19 score:67.3 best_domain_score:66.0 name:TIGR03142;
tm_num 2;
66996 65722 transmembrane_helix
ID metaerg.pl|01477
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o65731-65799i66001-66069o;
67212 68459 CDS
ID metaerg.pl|01478
allec_ids 1.5.3.1;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0008115; GO:0046653;
allko_ids K00303;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798927.1 1 415 evalue:4.4e-226 qcov:100.00 identity:92.50;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-3661; CRNFORCAT-PWY;
metacyc_pathway_name glycine betaine degradation I;; creatinine degradation I;;
metacyc_pathway_type Glycine-Betaine-Degradation;; Creatinine-Degradation;;
pfam_acc PF01266; PF13450; PF01946; PF04820;
pfam_desc FAD dependent oxidoreductase; NAD(P)-binding Rossmann-like domain; Thi4 family; Tryptophan halogenase;
pfam_id DAO; NAD_binding_8; Thi4; Trp_halogenase;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:5.5e-59 score:199.7 best_domain_score:199.5 name:DAO; db:Pfam-A.hmm|PF13450.6 evalue:1.1e-05 score:24.8 best_domain_score:23.8 name:NAD_binding_8; db:Pfam-A.hmm|PF01946.17 evalue:1.2e-06 score:27.2 best_domain_score:26.2 name:Thi4; db:Pfam-A.hmm|PF04820.14 evalue:9.4e-05 score:20.7 best_domain_score:11.2 name:Trp_halogenase;
sprot_desc Sarcosine oxidase subunit beta;
sprot_id sp|Q52671|SOXB_RHOCB;
sprot_target db:uniprot_sprot|sp|Q52671|SOXB_RHOCB 1 415 evalue:3.1e-186 qcov:100.00 identity:75.40;
tigrfam_acc TIGR01373;
tigrfam_desc sarcosine oxidase, beta subunit family;
tigrfam_mainrole Energy metabolism;
tigrfam_name soxB;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01373 evalue:2.9e-189 score:628.3 best_domain_score:628.1 name:TIGR01373;
68566 68751 CDS
ID metaerg.pl|01479
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469699.1 1 61 evalue:5.1e-14 qcov:100.00 identity:62.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
tm_num 1;
68566 68751 transmembrane_helix
ID metaerg.pl|01480
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i68620-68688o;
68902 69225 CDS
ID metaerg.pl|01481
allgo_ids GO:0008115; GO:0046653;
allko_ids K00304;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481008.1 1 106 evalue:6.6e-49 qcov:99.10 identity:85.80;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF04267;
pfam_desc Sarcosine oxidase, delta subunit family;
pfam_id SoxD;
pfam_target db:Pfam-A.hmm|PF04267.12 evalue:3e-29 score:100.2 best_domain_score:99.9 name:SoxD;
69222 72224 CDS
ID metaerg.pl|01482
allec_ids 1.5.3.1;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0008115; GO:0046653;
allko_ids K03388; K00605; K00314; K00302;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798921.1 1 1000 evalue:0.0e+00 qcov:100.00 identity:82.70;
kegg_pathway_id 00790; 00260; 00670; 00910;
kegg_pathway_name Folate biosynthesis; Glycine, serine and threonine metabolism; One carbon pool by folate; Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id CRNFORCAT-PWY; PWY-3661;
metacyc_pathway_name creatinine degradation I;; glycine betaine degradation I;;
metacyc_pathway_type Creatinine-Degradation;; Glycine-Betaine-Degradation;;
pfam_acc PF00890; PF12831; PF13510; PF01571; PF08669; PF01134; PF13450; PF07992; PF17806;
pfam_desc FAD binding domain; FAD dependent oxidoreductase; 2Fe-2S iron-sulfur cluster binding domain; Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; Glucose inhibited division protein A; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Sarcosine oxidase A3 domain;
pfam_id FAD_binding_2; FAD_oxidored; Fer2_4; GCV_T; GCV_T_C; GIDA; NAD_binding_8; Pyr_redox_2; SO_alpha_A3;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:1.3e-07 score:30.3 best_domain_score:30.3 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:4.2e-10 score:38.8 best_domain_score:37.9 name:FAD_oxidored; db:Pfam-A.hmm|PF13510.6 evalue:2.6e-25 score:87.5 best_domain_score:84.7 name:Fer2_4; db:Pfam-A.hmm|PF01571.21 evalue:7e-75 score:250.9 best_domain_score:250.4 name:GCV_T; db:Pfam-A.hmm|PF08669.11 evalue:4.2e-15 score:54.7 best_domain_score:53.2 name:GCV_T_C; db:Pfam-A.hmm|PF01134.22 evalue:4.6e-06 score:25.2 best_domain_score:24.6 name:GIDA; db:Pfam-A.hmm|PF13450.6 evalue:4.6e-07 score:29.2 best_domain_score:27.6 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:4.1e-12 score:45.2 best_domain_score:44.5 name:Pyr_redox_2; db:Pfam-A.hmm|PF17806.1 evalue:3.5e-33 score:113.0 best_domain_score:111.9 name:SO_alpha_A3;
sprot_desc Sarcosine oxidase subunit alpha;
sprot_id sp|O87386|SOXA_RHIME;
sprot_target db:uniprot_sprot|sp|O87386|SOXA_RHIME 2 1000 evalue:5.7e-218 qcov:99.90 identity:43.90;
tigrfam_acc TIGR01372;
tigrfam_desc sarcosine oxidase, alpha subunit family;
tigrfam_mainrole Energy metabolism;
tigrfam_name soxA;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01372 evalue:0 score:1283.5 best_domain_score:1283.4 name:TIGR01372;
72217 72783 CDS
ID metaerg.pl|01483
allko_ids K00305;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798919.1 1 188 evalue:6.5e-60 qcov:100.00 identity:64.40;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF04268;
pfam_desc Sarcosine oxidase, gamma subunit family;
pfam_id SoxG;
pfam_target db:Pfam-A.hmm|PF04268.12 evalue:4.4e-19 score:68.3 best_domain_score:68.1 name:SoxG;
72872 73471 CDS
ID metaerg.pl|01484
allec_ids 1.15.1.1;
allgo_ids GO:0004784; GO:0006801; GO:0046872; GO:0055114;
allko_ids K04564; K00518;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246070.1 1 199 evalue:5.1e-111 qcov:100.00 identity:94.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id DETOX1-PWY;
metacyc_pathway_name superoxide radicals degradation;;
metacyc_pathway_type REACTIVE-OXYGEN-SPECIES-DEGRADATION;;
pfam_acc PF02777; PF00081;
pfam_desc Iron/manganese superoxide dismutases, C-terminal domain; Iron/manganese superoxide dismutases, alpha-hairpin domain;
pfam_id Sod_Fe_C; Sod_Fe_N;
pfam_target db:Pfam-A.hmm|PF02777.18 evalue:8.7e-36 score:121.4 best_domain_score:120.6 name:Sod_Fe_C; db:Pfam-A.hmm|PF00081.22 evalue:1e-25 score:89.2 best_domain_score:88.4 name:Sod_Fe_N;
sprot_desc Superoxide dismutase [Fe];
sprot_id sp|O30970|SODF_RHOCA;
sprot_target db:uniprot_sprot|sp|O30970|SODF_RHOCA 1 199 evalue:5.5e-104 qcov:100.00 identity:87.50;
73678 74454 CDS
ID metaerg.pl|01485
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter sp000526275;
genomedb_acc GCF_000526275.1;
genomedb_target db:genomedb|GCF_000526275.1|WP_024810559.1 1 256 evalue:7.1e-81 qcov:99.20 identity:59.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01841;
pfam_desc Transglutaminase-like superfamily;
pfam_id Transglut_core;
pfam_target db:Pfam-A.hmm|PF01841.19 evalue:9.9e-22 score:76.8 best_domain_score:76.1 name:Transglut_core;
75633 74458 CDS
ID metaerg.pl|01486
allec_ids 2.3.1.16;
allgo_ids GO:0016747; GO:0003985;
allko_ids K07513; K07823; K07508; K00626; K00632; K07509; K02615; K07550;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798915.1 1 391 evalue:1.9e-186 qcov:100.00 identity:87.70;
kegg_pathway_id 00632; 00120; 00380; 00620; 00062; 01040; 00362; 00592; 00640; 00650; 00310; 00280; 00281; 00072; 02020; 00071;
kegg_pathway_name Benzoate degradation via CoA ligation; Bile acid biosynthesis; Tryptophan metabolism; Pyruvate metabolism; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation; alpha-Linolenic acid metabolism; Propanoate metabolism; Butanoate metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Synthesis and degradation of ketone bodies; Two-component system - General; Fatty acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-5136; PWY-6435; FAO-PWY; PWY-561;
metacyc_pathway_name fatty acid β-oxidation II (peroxisome);; 4-hydroxybenzoate biosynthesis III (plants);; fatty acid β-oxidation I;; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Fatty-Acid-Degradation;; 4-Hydroxybenzoate-Biosynthesis;; Fatty-Acid-Degradation;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF02803; PF00108;
pfam_desc Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF02803.18 evalue:3.9e-44 score:148.5 best_domain_score:147.1 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:5.2e-86 score:287.4 best_domain_score:287.1 name:Thiolase_N;
sprot_desc Beta-ketothiolase BktB;
sprot_id sp|Q0KBP1|BKTB_CUPNH;
sprot_target db:uniprot_sprot|sp|Q0KBP1|BKTB_CUPNH 3 391 evalue:1.9e-124 qcov:99.50 identity:60.40;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:4.7e-130 score:433.1 best_domain_score:432.9 name:TIGR01930;
77943 75706 CDS
ID metaerg.pl|01487
allec_ids 3.1.13.1;
allgo_ids GO:0003723; GO:0004540; GO:0005829; GO:0008859;
allko_ids K12573;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798913.1 1 744 evalue:0.0e+00 qcov:99.90 identity:88.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY0-1479;
metacyc_pathway_name tRNA processing;;
metacyc_pathway_type Nucleic-Acid-Processing;;
pfam_acc PF17876; PF00773; PF00575;
pfam_desc Cold shock domain; RNB domain; S1 RNA binding domain;
pfam_id CSD2; RNB; S1;
pfam_target db:Pfam-A.hmm|PF17876.1 evalue:3.3e-09 score:36.0 best_domain_score:29.1 name:CSD2; db:Pfam-A.hmm|PF00773.19 evalue:8.7e-94 score:313.7 best_domain_score:313.3 name:RNB; db:Pfam-A.hmm|PF00575.23 evalue:4.8e-10 score:38.9 best_domain_score:37.5 name:S1;
sprot_desc Ribonuclease R;
sprot_id sp|P44907|RNR_HAEIN;
sprot_target db:uniprot_sprot|sp|P44907|RNR_HAEIN 4 718 evalue:9.8e-98 qcov:96.00 identity:36.10;
tigrfam_acc TIGR00358; TIGR02063;
tigrfam_desc VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R;
tigrfam_mainrole Transcription; Transcription;
tigrfam_name 3_prime_RNase; RNase_R;
tigrfam_sub1role Degradation of RNA; Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00358 evalue:5.5e-142 score:473.5 best_domain_score:473.1 name:TIGR00358; db:TIGRFAMs.hmm|TIGR02063 evalue:1.8e-189 score:630.7 best_domain_score:630.4 name:TIGR02063;
78522 78091 CDS
ID metaerg.pl|01488
allgo_ids GO:0016747; GO:0004343; GO:0006048;
allko_ids K01207;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798911.1 2 139 evalue:3.1e-54 qcov:96.50 identity:75.40;
kegg_pathway_id 00530; 01032;
kegg_pathway_name Aminosugars metabolism; Glycan structures - degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00583; PF13673; PF13444; PF13508; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_5; Acetyltransf_7; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.6e-14 score:53.4 best_domain_score:52.6 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:1e-20 score:73.2 best_domain_score:73.0 name:Acetyltransf_10; db:Pfam-A.hmm|PF13444.6 evalue:7.8e-05 score:22.6 best_domain_score:15.4 name:Acetyltransf_5; db:Pfam-A.hmm|PF13508.7 evalue:1.7e-13 score:50.1 best_domain_score:49.4 name:Acetyltransf_7; db:Pfam-A.hmm|PF08445.10 evalue:8.2e-06 score:25.0 best_domain_score:24.2 name:FR47;
sprot_desc hypothetical protein;
sprot_id sp|P37504|YYAT_BACSU;
sprot_target db:uniprot_sprot|sp|P37504|YYAT_BACSU 9 139 evalue:5.3e-16 qcov:91.60 identity:35.10;
79676 78519 CDS
ID metaerg.pl|01489
allec_ids 3.5.1.18;
allgo_ids GO:0016787; GO:0050897; GO:0008237; GO:0009014; GO:0008270; GO:0019877; GO:0009089;
allko_ids K01439;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799286.1 9 383 evalue:1.2e-185 qcov:97.40 identity:86.10;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id P4-PWY; DAPLYSINESYN-PWY; PWY0-781;
metacyc_pathway_name superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; L-lysine biosynthesis I;; aspartate superpathway;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Super-Pathways;;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:1.4e-20 score:72.4 best_domain_score:71.8 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:1.2e-39 score:135.5 best_domain_score:135.2 name:Peptidase_M20;
sprot_desc Succinyl-diaminopimelate desuccinylase;
sprot_id sp|A4WNJ6|DAPE_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WNJ6|DAPE_RHOS5 7 383 evalue:3.1e-156 qcov:97.90 identity:71.40;
tigrfam_acc TIGR01246;
tigrfam_desc succinyl-diaminopimelate desuccinylase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapE_proteo;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01246 evalue:1e-112 score:376.0 best_domain_score:375.8 name:TIGR01246;
80013 79663 CDS
ID metaerg.pl|01490
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480823.1 3 116 evalue:1.2e-40 qcov:98.30 identity:79.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
80740 80042 CDS
ID metaerg.pl|01491
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657701.1 2 227 evalue:2.2e-65 qcov:97.40 identity:64.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF13472;
pfam_desc GDSL-like Lipase/Acylhydrolase family;
pfam_id Lipase_GDSL_2;
pfam_target db:Pfam-A.hmm|PF13472.6 evalue:1.3e-19 score:70.5 best_domain_score:70.3 name:Lipase_GDSL_2;
80842 81939 CDS
ID metaerg.pl|01492
allec_ids 2.3.1.-; 2.3.1.191;
allgo_ids GO:0016410; GO:0009245;
allko_ids K02536; K04042; K13006; K00640; K00677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798905.1 1 359 evalue:6.1e-179 qcov:98.40 identity:89.70;
kegg_pathway_id 00920; 00272; 00530; 00540;
kegg_pathway_name Sulfur metabolism; Cysteine metabolism; Aminosugars metabolism; Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY1-3; PWY-6397; PWY-6312; PWY-6418; PWY-6442; PWY-4801; PWY-5184; BENZCOA-PWY; KDO-NAGLIPASYN-PWY; PWY-6310; PWY-5139; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5080; PWY-5477; PWY-5981; PWY-5437; LPSSYN-PWY; NAGLIPASYN-PWY; PWY-6432; PWY1A0-6325; PWY-6413; PWYG-321; FASYN-INITIAL-PWY; PWY-6113; PWY-5400; PWY-5209; PWY-5965; PWY-6412; KDO-LIPASYN-PWY; PWY-5393; PWY-5972; PWY-5405; PWY-5307; PWY-6318; PWY-5284; ECASYN-PWY; PWY-6295; P3-PWY; PWY-6515; THREOCAT-PWY; PWY-6438; PWY-84; PWY-5268; PWY-6411; PWY-5987; PWY0-881; PWY-5140; PWY-5313; CENTBENZCOA-PWY; PWY-6316; PWY-6404;
metacyc_pathway_name polyhydroxybutanoate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; barbaloin biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; aloesone biosynthesis I;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; superpathway of (Kdo)2-lipid A biosynthesis;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; sophorolipid biosynthesis;; very long chain fatty acid biosynthesis I;; gallotannin biosynthesis;; CDP-diacylglycerol biosynthesis III;; L-threonine degradation I;; superpathway of lipopolysaccharide biosynthesis;; lipid IVA biosynthesis;; curcuminoid biosynthesis;; actinorhodin biosynthesis;; ginsenoside degradation III;; mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; superpathway of mycolate biosynthesis;; amaranthin biosynthesis;; methyl-coenzyme M oxidation to CO2;; fatty acid biosynthesis initiation III;; ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; raspberry ketone biosynthesis;; stearate biosynthesis I (animals and fungi);; superpathway of betalain biosynthesis;; gentiodelphin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; shisonin biosynthesis;; enterobacterial common antigen biosynthesis;; ; gallate degradation III (anaerobic);; phloridzin biosynthesis;; superpathway of L-threonine metabolism;; phenylphenalenone biosynthesis;; resveratrol biosynthesis;; salvianin biosynthesis;; ginsenoside degradation I;; sorgoleone biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; cannabinoid biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Storage-Compounds-Biosynthesis;; Cell-Wall-Biosynthesis;; POLYKETIDE-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; POLYKETIDE-SYN;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis;; GALLOTANNINS;; CDP-diacylglycerol-Biosynthesis;; THREONINE-DEG;; Lipid-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; TERPENOID-DEG;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; BETALAIN-ALKALOIDS;; METHANOGENESIS;; Fatty-acid-biosynthesis;; Ginsenoside-Degradation;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; Stearate-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; ANTHOCYANIN-SYN;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ; GALLATE-DEG;; FLAVONOID-SYN;; Super-Pathways; THREONINE-DEG;; POLYKETIDE-SYN;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; ANTHOCYANIN-SYN;; Ginsenoside-Degradation;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF00132;
pfam_desc Bacterial transferase hexapeptide (six repeats);
pfam_id Hexapep;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:3.3e-23 score:79.7 best_domain_score:33.2 name:Hexapep;
sprot_desc UDP-3-O-acylglucosamine N-acyltransferase;
sprot_id sp|Q5LS40|LPXD_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LS40|LPXD_RUEPO 1 356 evalue:2.8e-53 qcov:97.50 identity:69.10;
tigrfam_acc TIGR01853;
tigrfam_desc UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD;
tigrfam_mainrole Cell envelope;
tigrfam_name lipid_A_lpxD;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01853 evalue:5.6e-80 score:267.9 best_domain_score:154.6 name:TIGR01853;
82006 82518 CDS
ID metaerg.pl|01493
allec_ids 1.5.1.42;
allgo_ids GO:0010181; GO:0016491;
allko_ids K00492; K20146;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799285.1 6 170 evalue:9.7e-71 qcov:97.10 identity:79.40;
kegg_pathway_id 00626; 00622; 00624; 00120; 00150; 00361; 00903; 00350; 00360; 00340; 00680;
kegg_pathway_name Naphthalene and anthracene degradation; Toluene and xylene degradation; 1- and 2-Methylnaphthalene degradation; Bile acid biosynthesis; Androgen and estrogen metabolism; gamma-Hexachlorocyclohexane degradation; Limonene and pinene degradation; Tyrosine metabolism; Phenylalanine metabolism; Histidine metabolism; Methane metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01613;
pfam_desc Flavin reductase like domain;
pfam_id Flavin_Reduct;
pfam_target db:Pfam-A.hmm|PF01613.18 evalue:1.4e-26 score:92.6 best_domain_score:92.4 name:Flavin_Reduct;
sprot_desc FMN reductase (NADH) NtaB;
sprot_id sp|P54990|NTAB_AMIAI;
sprot_target db:uniprot_sprot|sp|P54990|NTAB_AMIAI 19 168 evalue:2.6e-30 qcov:88.20 identity:47.40;
82585 83544 CDS
ID metaerg.pl|01494
allec_ids 1.3.1.75;
allgo_ids GO:0003824; GO:0050662; GO:0009941; GO:0009534; GO:0016020; GO:0051744; GO:0033728; GO:0015995;
allko_ids K03953; K00329; K00356; K19073;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468918.1 6 319 evalue:1.4e-115 qcov:98.40 identity:66.80;
kegg_pathway_id 00130; 05012; 00190;
kegg_pathway_name Ubiquinone biosynthesis; Parkinson's disease; Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-5529; PWY-5531; CHLOROPHYLL-SYN;
metacyc_pathway_name superpathway of bacteriochlorophyll a biosynthesis;; 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);;
metacyc_pathway_type Chlorophyll-a-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; Chlorophyllide-a-Biosynthesis;;
pfam_acc PF01370; PF13460; PF05368;
pfam_desc NAD dependent epimerase/dehydratase family; NAD(P)H-binding ; NmrA-like family;
pfam_id Epimerase; NAD_binding_10; NmrA;
pfam_target db:Pfam-A.hmm|PF01370.21 evalue:2.2e-11 score:42.9 best_domain_score:41.6 name:Epimerase; db:Pfam-A.hmm|PF13460.6 evalue:4.7e-26 score:91.0 best_domain_score:90.4 name:NAD_binding_10; db:Pfam-A.hmm|PF05368.13 evalue:9.4e-09 score:34.4 best_domain_score:30.9 name:NmrA;
sprot_desc Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic;
sprot_id sp|B6SZW0|DCVR_MAIZE;
sprot_target db:uniprot_sprot|sp|B6SZW0|DCVR_MAIZE 8 319 evalue:2.4e-77 qcov:97.80 identity:48.30;
86267 83625 CDS
ID metaerg.pl|01495
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798904.1 1 880 evalue:0.0e+00 qcov:100.00 identity:89.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF06808; PF11874;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component; Domain of unknown function (DUF3394);
pfam_id DctM; DUF3394;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:2.8e-73 score:246.4 best_domain_score:245.6 name:DctM; db:Pfam-A.hmm|PF11874.8 evalue:3e-58 score:195.7 best_domain_score:194.2 name:DUF3394;
tigrfam_acc TIGR02123;
tigrfam_desc TRAP transporter, 4TM/12TM fusion protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TRAP_fused;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR02123 evalue:4e-191 score:636.0 best_domain_score:635.3 name:TIGR02123;
tm_num 20;
86267 83625 transmembrane_helix
ID metaerg.pl|01496
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i83727-83786o83856-83909i83928-83996o84024-84083i84102-84170o84246-84314i84402-84470o84549-84617i84636-84695o84753-84818i84837-84905o84978-85031i85206-85274o85302-85370i85389-85457o85485-85553i85590-85658o85701-85769i85788-85841o86181-86234i;
87331 86366 CDS
ID metaerg.pl|01497
allko_ids K07080;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482129.1 1 321 evalue:3.9e-169 qcov:100.00 identity:91.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF09084; PF16868;
pfam_desc NMT1/THI5 like; NMT1-like family;
pfam_id NMT1; NMT1_3;
pfam_target db:Pfam-A.hmm|PF09084.11 evalue:7.4e-06 score:25.3 best_domain_score:24.5 name:NMT1; db:Pfam-A.hmm|PF16868.5 evalue:1.1e-91 score:306.5 best_domain_score:306.3 name:NMT1_3;
sp YES;
sprot_desc 31 kDa immunogenic protein;
sprot_id sp|P0A3T3|BCSP_BRUAB;
sprot_target db:uniprot_sprot|sp|P0A3T3|BCSP_BRUAB 3 321 evalue:1.1e-45 qcov:99.40 identity:35.20;
tigrfam_acc TIGR02122;
tigrfam_desc TRAP transporter solute receptor, TAXI family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TRAP_TAXI;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR02122 evalue:1.4e-104 score:348.6 best_domain_score:348.4 name:TIGR02122;
86366 86431 signal_peptide
ID metaerg.pl|01498
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
88803 87643 CDS
ID metaerg.pl|01499
allec_ids 3.-.-.-;
allgo_ids GO:0016787;
allko_ids K21613;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468920.1 1 386 evalue:2.0e-188 qcov:100.00 identity:81.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:1.5e-07 score:30.6 best_domain_score:29.4 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:4e-34 score:117.4 best_domain_score:116.5 name:Peptidase_M20;
sprot_desc Uncharacterized hydrolase YtnL;
sprot_id sp|O34980|YTNL_BACSU;
sprot_target db:uniprot_sprot|sp|O34980|YTNL_BACSU 13 384 evalue:5.7e-65 qcov:96.40 identity:38.30;
tigrfam_acc TIGR01891;
tigrfam_desc amidohydrolase;
tigrfam_mainrole Protein fate;
tigrfam_name amidohydrolases;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01891 evalue:3.9e-99 score:331.4 best_domain_score:331.2 name:TIGR01891;
89521 88871 CDS
ID metaerg.pl|01500
allgo_ids GO:0051304; GO:0005737; GO:0051301; GO:0006260;
allko_ids K06024;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798900.1 4 216 evalue:3.7e-91 qcov:98.60 identity:84.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF04079;
pfam_desc Segregation and condensation complex subunit ScpB;
pfam_id SMC_ScpB;
pfam_target db:Pfam-A.hmm|PF04079.16 evalue:2.8e-47 score:159.5 best_domain_score:159.2 name:SMC_ScpB;
sprot_desc Segregation and condensation protein B;
sprot_id sp|Q67NF6|SCPB_SYMTH;
sprot_target db:uniprot_sprot|sp|Q67NF6|SCPB_SYMTH 23 199 evalue:6.3e-21 qcov:81.90 identity:37.40;
tigrfam_acc TIGR00281;
tigrfam_desc segregation and condensation protein B;
tigrfam_mainrole DNA metabolism;
tigrfam_name TIGR00281;
tigrfam_sub1role Chromosome-associated proteins;
tigrfam_target db:TIGRFAMs.hmm|TIGR00281 evalue:7.5e-29 score:99.8 best_domain_score:99.5 name:TIGR00281;
90309 89527 CDS
ID metaerg.pl|01501
allgo_ids GO:0005737; GO:0007049; GO:0051301; GO:0007059;
allko_ids K05896;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468921.1 1 260 evalue:8.6e-127 qcov:100.00 identity:90.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF02616;
pfam_desc Segregation and condensation protein ScpA;
pfam_id SMC_ScpA;
pfam_target db:Pfam-A.hmm|PF02616.14 evalue:1.9e-12 score:46.9 best_domain_score:34.0 name:SMC_ScpA;
sprot_desc Segregation and condensation protein A;
sprot_id sp|Q83CP8|SCPA_COXBU;
sprot_target db:uniprot_sprot|sp|Q83CP8|SCPA_COXBU 18 257 evalue:1.2e-21 qcov:92.30 identity:33.60;
90959 90366 CDS
ID metaerg.pl|01502
allec_ids 2.5.1.9;
allgo_ids GO:1902444; GO:0004746; GO:0070207; GO:0009231;
allko_ids K00793;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796941.1 1 196 evalue:4.7e-93 qcov:99.50 identity:86.70;
kegg_pathway_id 00740;
kegg_pathway_name Riboflavin metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-6167; RIBOSYN2-PWY; PWY-6168;
metacyc_pathway_name flavin biosynthesis II (archaea);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis III (fungi);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00677;
pfam_desc Lumazine binding domain;
pfam_id Lum_binding;
pfam_target db:Pfam-A.hmm|PF00677.17 evalue:6.8e-48 score:159.8 best_domain_score:80.4 name:Lum_binding;
sprot_desc Riboflavin synthase;
sprot_id sp|Q2YN92|RISA_BRUA2;
sprot_target db:uniprot_sprot|sp|Q2YN92|RISA_BRUA2 1 196 evalue:1.6e-55 qcov:99.50 identity:55.90;
tigrfam_acc TIGR00187;
tigrfam_desc riboflavin synthase, alpha subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribE;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00187 evalue:1.7e-55 score:186.5 best_domain_score:186.3 name:TIGR00187;
91137 92426 CDS
ID metaerg.pl|01503
allgo_ids GO:0000271; GO:0015774;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796940.1 1 429 evalue:2.4e-235 qcov:100.00 identity:89.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF05159;
pfam_desc Capsule polysaccharide biosynthesis protein;
pfam_id Capsule_synth;
pfam_target db:Pfam-A.hmm|PF05159.14 evalue:2.9e-48 score:164.1 best_domain_score:163.7 name:Capsule_synth;
sprot_desc Capsule polysaccharide export protein KpsS;
sprot_id sp|P42218|KPSS5_ECOLX;
sprot_target db:uniprot_sprot|sp|P42218|KPSS5_ECOLX 8 388 evalue:2.4e-48 qcov:88.80 identity:29.60;
92519 93658 CDS
ID metaerg.pl|01504
allgo_ids GO:0015159; GO:0015774; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797084.1 13 377 evalue:2.3e-176 qcov:96.30 identity:86.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF02563;
pfam_desc Polysaccharide biosynthesis/export protein;
pfam_id Poly_export;
pfam_target db:Pfam-A.hmm|PF02563.16 evalue:1.4e-14 score:53.3 best_domain_score:51.4 name:Poly_export;
sp YES;
92519 92587 lipoprotein_signal_peptide
ID metaerg.pl|01505
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
93667 95673 CDS
ID metaerg.pl|01506
allgo_ids GO:0000271; GO:0015774; GO:0005737;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797083.1 30 668 evalue:1.2e-305 qcov:95.70 identity:78.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF05159;
pfam_desc Capsule polysaccharide biosynthesis protein;
pfam_id Capsule_synth;
pfam_target db:Pfam-A.hmm|PF05159.14 evalue:6.5e-74 score:248.4 best_domain_score:109.4 name:Capsule_synth;
sprot_desc Capsule polysaccharide export protein KpsC;
sprot_id sp|P42217|KPSC5_ECOLX;
sprot_target db:uniprot_sprot|sp|P42217|KPSC5_ECOLX 48 647 evalue:2.0e-110 qcov:89.80 identity:41.70;
97352 95679 CDS
ID metaerg.pl|01507
allec_ids 3.1.-.-;
allgo_ids GO:0005737; GO:0004534; GO:0004521; GO:0003723; GO:0008270; GO:0006364;
allko_ids K12574;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796939.1 1 557 evalue:2.4e-283 qcov:100.00 identity:86.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00753; PF12706; PF07521;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain; Zn-dependent metallo-hydrolase RNA specificity domain;
pfam_id Lactamase_B; Lactamase_B_2; RMMBL;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:1e-15 score:57.5 best_domain_score:56.8 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:5.4e-12 score:44.9 best_domain_score:43.1 name:Lactamase_B_2; db:Pfam-A.hmm|PF07521.12 evalue:4.3e-09 score:35.4 best_domain_score:33.5 name:RMMBL;
sprot_desc Ribonuclease J;
sprot_id sp|M4MR97|RNJ_SINM2;
sprot_target db:uniprot_sprot|sp|M4MR97|RNJ_SINM2 4 554 evalue:3.8e-110 qcov:98.90 identity:39.80;
98137 97355 CDS
ID metaerg.pl|01508
allec_ids 2.7.1.33;
allgo_ids GO:0004594; GO:0005737; GO:0005524; GO:0046872; GO:0015937;
allko_ids K03525;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796938.1 1 260 evalue:6.0e-128 qcov:100.00 identity:86.20;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-4242; PANTOSYN-PWY; PWY-4221; COA-PWY;
metacyc_pathway_name ; superpathway of coenzyme A biosynthesis I (bacteria);; superpathway of coenzyme A biosynthesis II (plants);; coenzyme A biosynthesis I (prokaryotic);;
metacyc_pathway_type ; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis;;
pfam_acc PF03309;
pfam_desc Type III pantothenate kinase;
pfam_id Pan_kinase;
pfam_target db:Pfam-A.hmm|PF03309.14 evalue:6.7e-64 score:214.8 best_domain_score:214.5 name:Pan_kinase;
sprot_desc Type III pantothenate kinase;
sprot_id sp|Q28T47|COAX_JANSC;
sprot_target db:uniprot_sprot|sp|Q28T47|COAX_JANSC 1 253 evalue:1.3e-102 qcov:97.30 identity:73.10;
tigrfam_acc TIGR00671;
tigrfam_desc pantothenate kinase, type III;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name baf;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00671 evalue:1.8e-60 score:203.9 best_domain_score:203.7 name:TIGR00671;
98875 98153 CDS
ID metaerg.pl|01509
allec_ids 6.3.4.15;
allgo_ids GO:0006464; GO:0005524; GO:0004077;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797082.1 3 240 evalue:4.1e-91 qcov:99.20 identity:72.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY0-1264;
metacyc_pathway_name biotin-carboxyl carrier protein assembly;;
metacyc_pathway_type Lipid-Biosynthesis;;
pfam_acc PF02237; PF03099; PF16917;
pfam_desc Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; Biotin/lipoate A/B protein ligase family;
pfam_id BPL_C; BPL_LplA_LipB; BPL_LplA_LipB_2;
pfam_target db:Pfam-A.hmm|PF02237.17 evalue:1.7e-08 score:33.5 best_domain_score:32.6 name:BPL_C; db:Pfam-A.hmm|PF03099.19 evalue:1.1e-15 score:57.0 best_domain_score:56.6 name:BPL_LplA_LipB; db:Pfam-A.hmm|PF16917.5 evalue:7.3e-10 score:37.9 best_domain_score:37.4 name:BPL_LplA_LipB_2;
sprot_desc Biotin--[acetyl-CoA-carboxylase] ligase;
sprot_id sp|P29906|BIRA_PARDE;
sprot_target db:uniprot_sprot|sp|P29906|BIRA_PARDE 5 239 evalue:1.1e-66 qcov:97.90 identity:58.00;
tigrfam_acc TIGR00121;
tigrfam_desc biotin--[acetyl-CoA-carboxylase] ligase;
tigrfam_mainrole Protein fate;
tigrfam_name birA_ligase;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00121 evalue:4.4e-40 score:136.9 best_domain_score:136.7 name:TIGR00121;
100328 98889 CDS
ID metaerg.pl|01510
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0042717; GO:0008137; GO:0048038; GO:0042773;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468928.1 1 479 evalue:5.1e-226 qcov:100.00 identity:89.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:9.6e-87 score:290.1 best_domain_score:290.1 name:Proton_antipo_M;
sprot_desc NADH-quinone oxidoreductase subunit N;
sprot_id sp|P50973|NUON_RHOCA;
sprot_target db:uniprot_sprot|sp|P50973|NUON_RHOCA 1 478 evalue:1.3e-167 qcov:99.80 identity:66.10;
tigrfam_acc TIGR01770;
tigrfam_desc proton-translocating NADH-quinone oxidoreductase, chain N;
tigrfam_mainrole Energy metabolism;
tigrfam_name NDH_I_N;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01770 evalue:2.2e-140 score:468.0 best_domain_score:467.7 name:TIGR01770;
tm_num 13;
100328 98889 transmembrane_helix
ID metaerg.pl|01511
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i98907-98975o99018-99086i99123-99182o99210-99278i99393-99461o99489-99557i99594-99662o99690-99758i99777-99845o99855-99923i99984-100052o100095-100163i100230-100298o;
101881 100340 CDS
ID metaerg.pl|01512
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796936.1 1 513 evalue:5.1e-264 qcov:100.00 identity:94.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:1.9e-90 score:302.3 best_domain_score:302.3 name:Proton_antipo_M;
sprot_desc NADH-quinone oxidoreductase chain 13;
sprot_id sp|P29925|NQO13_PARDE;
sprot_target db:uniprot_sprot|sp|P29925|NQO13_PARDE 1 513 evalue:2.6e-214 qcov:100.00 identity:76.20;
tigrfam_acc TIGR01972;
tigrfam_desc proton-translocating NADH-quinone oxidoreductase, chain M;
tigrfam_mainrole Energy metabolism;
tigrfam_name NDH_I_M;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01972 evalue:3.2e-186 score:618.9 best_domain_score:618.7 name:TIGR01972;
tm_num 14;
101881 100340 transmembrane_helix
ID metaerg.pl|01513
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o100349-100408i100445-100513o100589-100657i100676-100732o100742-100801i100835-100903o100961-101029i101090-101158o101186-101254i101273-101326o101354-101422i101459-101527o101585-101653i101729-101797o;
103845 101881 CDS
ID metaerg.pl|01514
allec_ids 7.1.1.-; 1.6.-.-;
allgo_ids GO:0008137; GO:0042773; GO:0055114; GO:0016021; GO:0005886; GO:0048038;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797081.1 1 654 evalue:0.0e+00 qcov:100.00 identity:90.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF06455; PF00361; PF00662;
pfam_desc NADH dehydrogenase subunit 5 C-terminus; Proton-conducting membrane transporter; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus;
pfam_id NADH5_C; Proton_antipo_M; Proton_antipo_N;
pfam_target db:Pfam-A.hmm|PF06455.11 evalue:3.3e-08 score:32.6 best_domain_score:21.0 name:NADH5_C; db:Pfam-A.hmm|PF00361.20 evalue:2.6e-90 score:301.8 best_domain_score:301.8 name:Proton_antipo_M; db:Pfam-A.hmm|PF00662.20 evalue:2.4e-22 score:78.0 best_domain_score:78.0 name:Proton_antipo_N;
sprot_desc NADH-quinone oxidoreductase chain 12;
sprot_id sp|P29924|NQO12_PARDE;
sprot_target db:uniprot_sprot|sp|P29924|NQO12_PARDE 5 651 evalue:8.5e-263 qcov:98.90 identity:66.20;
tigrfam_acc TIGR01974;
tigrfam_desc proton-translocating NADH-quinone oxidoreductase, chain L;
tigrfam_mainrole Energy metabolism;
tigrfam_name NDH_I_L;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01974 evalue:1.2e-243 score:809.8 best_domain_score:809.6 name:TIGR01974;
tm_num 16;
103845 101881 transmembrane_helix
ID metaerg.pl|01515
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o101890-101949i101968-102027o102115-102183i102220-102279o102292-102360i102397-102465o102556-102624i102643-102711o102739-102807i102826-102894o102904-102972i103033-103101o103144-103212i103297-103365o103456-103524i103762-103830o;
104155 103850 CDS
ID metaerg.pl|01516
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0050136; GO:0048038; GO:0042773;
allko_ids K00340;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246396.1 1 101 evalue:2.1e-41 qcov:100.00 identity:97.00;
kegg_pathway_id 00130; 00190;
kegg_pathway_name Ubiquinone biosynthesis; Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00420;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
pfam_id Oxidored_q2;
pfam_target db:Pfam-A.hmm|PF00420.24 evalue:4.1e-26 score:89.9 best_domain_score:89.7 name:Oxidored_q2;
sprot_desc NADH-quinone oxidoreductase subunit K;
sprot_id sp|Q5LPT3|NUOK_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LPT3|NUOK_RUEPO 1 101 evalue:2.6e-41 qcov:100.00 identity:90.10;
tm_num 3;
104155 103850 transmembrane_helix
ID metaerg.pl|01517
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o103862-103921i103934-104002o104030-104098i;
104849 104232 CDS
ID metaerg.pl|01518
allec_ids 7.1.1.-;
allgo_ids GO:0008137; GO:0055114; GO:0016021; GO:0005886; GO:0048038;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468932.1 1 205 evalue:6.4e-85 qcov:100.00 identity:82.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00499;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 6;
pfam_id Oxidored_q3;
pfam_target db:Pfam-A.hmm|PF00499.20 evalue:6.4e-38 score:128.9 best_domain_score:128.6 name:Oxidored_q3;
sprot_desc NADH-quinone oxidoreductase chain 10;
sprot_id sp|P29922|NQO10_PARDE;
sprot_target db:uniprot_sprot|sp|P29922|NQO10_PARDE 6 204 evalue:1.7e-60 qcov:97.10 identity:61.80;
tm_num 5;
104849 104232 transmembrane_helix
ID metaerg.pl|01519
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o104247-104306i104325-104378o104388-104456i104493-104561o104673-104741i;
105392 104901 CDS
ID metaerg.pl|01520
allec_ids 7.1.1.-;
allgo_ids GO:0005886; GO:0051539; GO:0005506; GO:0050136; GO:0048038;
allko_ids K00171; K00441; K00336; K00205; K00226; K00335; K00125; K00338; K00265; K00533; K00436; K00124; K00172; K05580; K11181; K03388; K00207; K05588; K00170; K00176; K08264; K00390; K08349; K00266; K03047; K00532; K00443; K03390; K00123; K00246; K00395; K00240; K00204; K00337; K00873; K00235; K00245; K03941; K00380; K00122; K11260; K04014;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796933.1 1 163 evalue:1.3e-91 qcov:100.00 identity:96.30;
kegg_pathway_id 00230; 00020; 00770; 00920; 00710; 00010; 00680; 00410; 00190; 00130; 02020; 00910; 00633; 00251; 00240; 00632; 00720; 00983; 03020; 00650; 00640; 00790; 00630; 05012; 00450; 00620;
kegg_pathway_name Purine metabolism; Citrate cycle (TCA cycle); Pantothenate and CoA biosynthesis; Sulfur metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Methane metabolism; beta-Alanine metabolism; Oxidative phosphorylation; Ubiquinone biosynthesis; Two-component system - General; Nitrogen metabolism; Trinitrotoluene degradation; Glutamate metabolism; Pyrimidine metabolism; Benzoate degradation via CoA ligation; Reductive carboxylate cycle (CO2 fixation); Drug metabolism - other enzymes; RNA polymerase; Butanoate metabolism; Propanoate metabolism; Folate biosynthesis; Glyoxylate and dicarboxylate metabolism; Parkinson's disease; Selenoamino acid metabolism; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00037; PF13237; PF13484; PF12797; PF14697; PF12800; PF12837; PF12838; PF13183; PF13187;
pfam_desc 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S double cluster binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id Fer4; Fer4_10; Fer4_16; Fer4_2; Fer4_21; Fer4_4; Fer4_6; Fer4_7; Fer4_8; Fer4_9;
pfam_target db:Pfam-A.hmm|PF00037.27 evalue:1.2e-14 score:52.7 best_domain_score:34.5 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:1.6e-09 score:37.0 best_domain_score:27.9 name:Fer4_10; db:Pfam-A.hmm|PF13484.6 evalue:2.3e-11 score:43.7 best_domain_score:24.9 name:Fer4_16; db:Pfam-A.hmm|PF12797.7 evalue:2.9e-07 score:29.4 best_domain_score:18.3 name:Fer4_2; db:Pfam-A.hmm|PF14697.6 evalue:5.2e-10 score:38.6 best_domain_score:26.4 name:Fer4_21; db:Pfam-A.hmm|PF12800.7 evalue:9.7e-07 score:28.1 best_domain_score:21.8 name:Fer4_4; db:Pfam-A.hmm|PF12837.7 evalue:9e-08 score:31.1 best_domain_score:21.0 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:1.1e-13 score:50.8 best_domain_score:50.3 name:Fer4_7; db:Pfam-A.hmm|PF13183.6 evalue:1.3e-09 score:37.6 best_domain_score:22.0 name:Fer4_8; db:Pfam-A.hmm|PF13187.6 evalue:1.7e-09 score:36.9 best_domain_score:36.4 name:Fer4_9;
sprot_desc NADH-quinone oxidoreductase subunit 9;
sprot_id sp|P29921|NQO9_PARDE;
sprot_target db:uniprot_sprot|sp|P29921|NQO9_PARDE 1 163 evalue:1.0e-60 qcov:100.00 identity:87.70;
tigrfam_acc TIGR01971;
tigrfam_desc NADH-quinone oxidoreductase, chain I;
tigrfam_mainrole Energy metabolism;
tigrfam_name NuoI;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01971 evalue:1.2e-51 score:172.5 best_domain_score:172.3 name:TIGR01971;
106433 105396 CDS
ID metaerg.pl|01521
allec_ids 7.1.1.-;
allgo_ids GO:0016020; GO:0055114; GO:0016021; GO:0005886; GO:0016655; GO:0048038;
allko_ids K00337;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796932.1 1 345 evalue:8.3e-186 qcov:100.00 identity:95.90;
kegg_pathway_id 00190; 00130;
kegg_pathway_name Oxidative phosphorylation; Ubiquinone biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00146;
pfam_desc NADH dehydrogenase;
pfam_id NADHdh;
pfam_target db:Pfam-A.hmm|PF00146.21 evalue:4.3e-121 score:403.1 best_domain_score:402.8 name:NADHdh;
sprot_desc NADH-quinone oxidoreductase subunit H 1;
sprot_id sp|Q3J3F1|NUOH1_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J3F1|NUOH1_RHOS4 1 345 evalue:5.8e-162 qcov:100.00 identity:82.60;
tm_num 8;
106433 105396 transmembrane_helix
ID metaerg.pl|01522
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o105438-105506i105642-105701o105744-105812i105870-105938o105966-106025i106113-106181o106224-106292i106311-106379o;
106862 106449 CDS
ID metaerg.pl|01523
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796931.1 1 137 evalue:2.0e-50 qcov:100.00 identity:75.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
sp YES;
106449 106508 lipoprotein_signal_peptide
ID metaerg.pl|01524
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
108887 106869 CDS
ID metaerg.pl|01525
allec_ids 7.1.1.-; 1.6.99.5;
allgo_ids GO:0009055; GO:0051536; GO:0005886; GO:0051537; GO:0051539; GO:0046872; GO:0008137; GO:0048038; GO:0042773;
allko_ids K03934; K00122; K05299; K00201; K00532; K00123; K00202; K02035; K00369; K00338; K05580; K00203; K00436; K00176; K05588; K03388; K08348; K00205; K00336; K02567; K00372;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796930.1 1 672 evalue:0.0e+00 qcov:100.00 identity:90.20;
kegg_pathway_id 02010; 00910; 02020; 00190; 05012; 00630; 00130; 00680; 00790; 00720; 00020;
kegg_pathway_name ABC transporters - General; Nitrogen metabolism; Two-component system - General; Oxidative phosphorylation; Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Ubiquinone biosynthesis; Methane metabolism; Folate biosynthesis; Reductive carboxylate cycle (CO2 fixation); Citrate cycle (TCA cycle);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00111; PF13510; PF00384; PF10588; PF09326;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; NADH-ubiquinone oxidoreductase subunit G, C-terminal;
pfam_id Fer2; Fer2_4; Molybdopterin; NADH-G_4Fe-4S_3; NADH_dhqG_C;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:6.6e-11 score:41.2 best_domain_score:41.2 name:Fer2; db:Pfam-A.hmm|PF13510.6 evalue:1.9e-12 score:46.3 best_domain_score:44.4 name:Fer2_4; db:Pfam-A.hmm|PF00384.22 evalue:2.8e-56 score:190.5 best_domain_score:99.8 name:Molybdopterin; db:Pfam-A.hmm|PF10588.9 evalue:3.1e-18 score:64.2 best_domain_score:64.2 name:NADH-G_4Fe-4S_3; db:Pfam-A.hmm|PF09326.11 evalue:4.1e-11 score:42.6 best_domain_score:41.4 name:NADH_dhqG_C;
sprot_desc NADH-quinone oxidoreductase chain 3;
sprot_id sp|P29915|NQO3_PARDE;
sprot_target db:uniprot_sprot|sp|P29915|NQO3_PARDE 1 672 evalue:1.6e-296 qcov:100.00 identity:75.70;
tigrfam_acc TIGR01973;
tigrfam_desc NADH dehydrogenase (quinone), G subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name NuoG;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01973 evalue:4.2e-193 score:642.6 best_domain_score:642.4 name:TIGR01973;
109331 108891 CDS
ID metaerg.pl|01526
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796929.1 16 146 evalue:5.3e-49 qcov:89.70 identity:77.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF17267;
pfam_desc Family of unknown function (DUF5333);
pfam_id DUF5333;
pfam_target db:Pfam-A.hmm|PF17267.2 evalue:1.9e-22 score:78.7 best_domain_score:78.5 name:DUF5333;
sp YES;
108891 108965 signal_peptide
ID metaerg.pl|01527
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
110134 109328 CDS
ID metaerg.pl|01528
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tabrizicola;s__Tabrizicola sp002280405;
genomedb_acc GCA_002280405.1;
genomedb_target db:genomedb|GCA_002280405.1|OYX18300.1 42 254 evalue:7.9e-75 qcov:79.50 identity:59.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF13578;
pfam_desc Methyltransferase domain;
pfam_id Methyltransf_24;
pfam_target db:Pfam-A.hmm|PF13578.6 evalue:4.5e-07 score:30.1 best_domain_score:29.1 name:Methyltransf_24;
110636 110139 CDS
ID metaerg.pl|01529
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCA08;s__HLUCCA08 sp001314655;
genomedb_acc GCA_001314655.1;
genomedb_target db:genomedb|GCA_001314655.1|KPP87116.1 7 161 evalue:2.4e-66 qcov:93.90 identity:74.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF11695;
pfam_desc Domain of unknown function (DUF3291);
pfam_id DUF3291;
pfam_target db:Pfam-A.hmm|PF11695.8 evalue:4e-45 score:152.2 best_domain_score:151.9 name:DUF3291;
111937 110639 CDS
ID metaerg.pl|01530
allec_ids 7.1.1.-; 1.6.99.5;
allgo_ids GO:0051539; GO:0005886; GO:0010181; GO:0046872; GO:0051287; GO:0008137; GO:0048038;
allko_ids K03943; K00122; K00356; K05586; K00329; K00334; K03942; K00335; K05587; K00436; K00124;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796927.1 1 432 evalue:6.0e-250 qcov:100.00 identity:94.40;
kegg_pathway_id 00190; 05012; 00130; 00630; 00680;
kegg_pathway_name Oxidative phosphorylation; Parkinson's disease; Ubiquinone biosynthesis; Glyoxylate and dicarboxylate metabolism; Methane metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01512; PF10589; PF10531;
pfam_desc Respiratory-chain NADH dehydrogenase 51 Kd subunit; NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; SLBB domain;
pfam_id Complex1_51K; NADH_4Fe-4S; SLBB;
pfam_target db:Pfam-A.hmm|PF01512.17 evalue:2e-53 score:179.6 best_domain_score:179.1 name:Complex1_51K; db:Pfam-A.hmm|PF10589.9 evalue:6.1e-30 score:102.4 best_domain_score:101.4 name:NADH_4Fe-4S; db:Pfam-A.hmm|PF10531.9 evalue:7.2e-08 score:31.4 best_domain_score:30.5 name:SLBB;
sprot_desc NADH-quinone oxidoreductase chain 1;
sprot_id sp|P29913|NQO1_PARDE;
sprot_target db:uniprot_sprot|sp|P29913|NQO1_PARDE 1 432 evalue:5.7e-215 qcov:100.00 identity:80.80;
tigrfam_acc TIGR01959;
tigrfam_desc NADH oxidoreductase (quinone), F subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name nuoF_fam;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01959 evalue:1.1e-194 score:645.7 best_domain_score:645.5 name:TIGR01959;
112186 111959 CDS
ID metaerg.pl|01531
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796926.1 1 75 evalue:2.7e-25 qcov:100.00 identity:78.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF17272;
pfam_desc Family of unknown function (DUF5337);
pfam_id DUF5337;
pfam_target db:Pfam-A.hmm|PF17272.2 evalue:2.3e-28 score:97.0 best_domain_score:96.9 name:DUF5337;
tm_num 2;
112186 111959 transmembrane_helix
ID metaerg.pl|01532
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i112007-112066o112094-112162i;
113346 112204 CDS
ID metaerg.pl|01533
allko_ids K03942; K00334; K00335; K00329; K00436; K05587; K03943; K00356; K05586;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796925.1 1 380 evalue:2.2e-179 qcov:100.00 identity:82.40;
kegg_pathway_id 00680; 05012; 00630; 00130; 00190;
kegg_pathway_name Methane metabolism; Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Ubiquinone biosynthesis; Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01257;
pfam_desc Thioredoxin-like [2Fe-2S] ferredoxin;
pfam_id 2Fe-2S_thioredx;
pfam_target db:Pfam-A.hmm|PF01257.19 evalue:1.8e-52 score:176.3 best_domain_score:175.8 name:2Fe-2S_thioredx;
tigrfam_acc TIGR01958;
tigrfam_desc NADH-quinone oxidoreductase, E subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name nuoE_fam;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01958 evalue:3.8e-51 score:172.3 best_domain_score:171.9 name:TIGR01958;
114569 113346 CDS
ID metaerg.pl|01534
allec_ids 7.1.1.-; 1.6.99.5;
allgo_ids GO:0016651; GO:0048038; GO:0051287; GO:0055114; GO:0005886; GO:0050136;
allko_ids K13380; K00329; K13378; K05579; K03935; K00333;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468942.1 1 407 evalue:2.6e-223 qcov:100.00 identity:90.40;
kegg_pathway_id 00130; 05012; 00190;
kegg_pathway_name Ubiquinone biosynthesis; Parkinson's disease; Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00346;
pfam_desc Respiratory-chain NADH dehydrogenase, 49 Kd subunit;
pfam_id Complex1_49kDa;
pfam_target db:Pfam-A.hmm|PF00346.19 evalue:4.5e-118 score:392.5 best_domain_score:392.1 name:Complex1_49kDa;
sprot_desc NADH-quinone oxidoreductase subunit D;
sprot_id sp|Q163Q5|NUOD_ROSDO;
sprot_target db:uniprot_sprot|sp|Q163Q5|NUOD_ROSDO 1 407 evalue:1.2e-214 qcov:100.00 identity:85.30;
tigrfam_acc TIGR01962;
tigrfam_desc NADH dehydrogenase (quinone), D subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name NuoD;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01962 evalue:1.6e-172 score:572.8 best_domain_score:572.6 name:TIGR01962;
115542 114688 CDS
ID metaerg.pl|01535
allgo_ids GO:0008146;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter sp003509785;
genomedb_acc GCA_003509785.1;
genomedb_target db:genomedb|GCA_003509785.1|HBU14843.1 1 278 evalue:4.1e-66 qcov:97.90 identity:50.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00685; PF13469;
pfam_desc Sulfotransferase domain; Sulfotransferase family;
pfam_id Sulfotransfer_1; Sulfotransfer_3;
pfam_target db:Pfam-A.hmm|PF00685.27 evalue:1.9e-06 score:26.8 best_domain_score:25.1 name:Sulfotransfer_1; db:Pfam-A.hmm|PF13469.6 evalue:4.9e-09 score:36.1 best_domain_score:35.6 name:Sulfotransfer_3;
116171 115572 CDS
ID metaerg.pl|01536
allec_ids 7.1.1.-;
allgo_ids GO:0008137; GO:0055114; GO:0005886; GO:0048038;
allko_ids K00332; K05581; K13378; K13380;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468943.1 1 197 evalue:2.7e-96 qcov:99.00 identity:86.30;
kegg_pathway_id 00190; 00130;
kegg_pathway_name Oxidative phosphorylation; Ubiquinone biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00329;
pfam_desc Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
pfam_id Complex1_30kDa;
pfam_target db:Pfam-A.hmm|PF00329.19 evalue:2.3e-43 score:146.9 best_domain_score:146.4 name:Complex1_30kDa;
sprot_desc NADH-quinone oxidoreductase subunit C;
sprot_id sp|A4WU32|NUOC_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WU32|NUOC_RHOS5 1 197 evalue:1.9e-80 qcov:99.00 identity:71.60;
tigrfam_acc TIGR01961;
tigrfam_desc NADH (or F420H2) dehydrogenase, subunit C;
tigrfam_mainrole Energy metabolism;
tigrfam_name NuoC_fam;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01961 evalue:2.1e-42 score:143.6 best_domain_score:143.2 name:TIGR01961;
116715 116182 CDS
ID metaerg.pl|01537
allec_ids 7.1.1.-;
allgo_ids GO:0051536; GO:0055114; GO:0005886; GO:0051539; GO:0005506; GO:0008137; GO:0048038;
allko_ids K13380; K05582; K03940; K00331;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797079.1 4 177 evalue:4.1e-96 qcov:98.30 identity:97.70;
kegg_pathway_id 00130; 05012; 00190;
kegg_pathway_name Ubiquinone biosynthesis; Parkinson's disease; Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01058;
pfam_desc NADH ubiquinone oxidoreductase, 20 Kd subunit;
pfam_id Oxidored_q6;
pfam_target db:Pfam-A.hmm|PF01058.22 evalue:3e-23 score:81.3 best_domain_score:80.9 name:Oxidored_q6;
sprot_desc NADH-quinone oxidoreductase subunit B;
sprot_id sp|Q163Q1|NUOB_ROSDO;
sprot_target db:uniprot_sprot|sp|Q163Q1|NUOB_ROSDO 1 177 evalue:4.6e-94 qcov:100.00 identity:91.00;
tigrfam_acc TIGR01957;
tigrfam_desc NADH-quinone oxidoreductase, B subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name nuoB_fam;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01957 evalue:2.6e-72 score:240.6 best_domain_score:240.4 name:TIGR01957;
117116 116706 CDS
ID metaerg.pl|01538
allec_ids 7.1.1.-;
allgo_ids GO:0008137; GO:0055114; GO:0016021; GO:0005886; GO:0048038;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657573.1 10 136 evalue:3.0e-54 qcov:93.40 identity:87.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00507;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
pfam_id Oxidored_q4;
pfam_target db:Pfam-A.hmm|PF00507.19 evalue:4.1e-38 score:128.8 best_domain_score:128.8 name:Oxidored_q4;
sprot_desc NADH-quinone oxidoreductase subunit 7;
sprot_id sp|P29919|NQO7_PARDE;
sprot_target db:uniprot_sprot|sp|P29919|NQO7_PARDE 23 135 evalue:1.5e-44 qcov:83.10 identity:78.80;
tm_num 3;
117116 116706 transmembrane_helix
ID metaerg.pl|01539
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology o116781-116849i116937-117005o117033-117089i;
118088 117303 CDS
ID metaerg.pl|01540
allec_ids 4.2.1.116;
allgo_ids GO:0003824; GO:0043956; GO:0006631;
allko_ids K07514; K07515; K10527; K01825; K00022; K01692; K07516; K01782; K15016; K13766; K13767; K15019;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796922.1 2 259 evalue:1.8e-103 qcov:98.90 identity:79.10;
kegg_pathway_id 00650; 00640; 00071; 00410; 00592; 01040; 00903; 00062; 00632; 00930; 00380; 00310; 00281; 00280;
kegg_pathway_name Butanoate metabolism; Propanoate metabolism; Fatty acid metabolism; beta-Alanine metabolism; alpha-Linolenic acid metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-3941; PWY-5743; PWY-5789; PWY-4221;
metacyc_pathway_name β-alanine biosynthesis II;; 3-hydroxypropanoate cycle;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; superpathway of coenzyme A biosynthesis II (plants);;
metacyc_pathway_type Beta-Alanine-Biosynthesis;; Autotrophic-CO2-Fixation;; Autotrophic-CO2-Fixation;; CoA-Biosynthesis; Super-Pathways;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:5.9e-47 score:159.3 best_domain_score:159.0 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:6.5e-31 score:107.3 best_domain_score:106.8 name:ECH_2;
sprot_desc 3-hydroxypropionyl-coenzyme A dehydratase;
sprot_id sp|A4YI89|HPCD_METS5;
sprot_target db:uniprot_sprot|sp|A4YI89|HPCD_METS5 1 260 evalue:1.1e-22 qcov:99.60 identity:31.80;
118942 118085 CDS
ID metaerg.pl|01541
allec_ids 4.1.3.4;
allgo_ids GO:0003824; GO:0005829; GO:0004419; GO:0046872;
allko_ids K01649; K01640;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797078.1 1 283 evalue:1.4e-117 qcov:99.30 identity:74.90;
kegg_pathway_id 00650; 00072; 00620; 00290; 00280;
kegg_pathway_name Butanoate metabolism; Synthesis and degradation of ketone bodies; Pyruvate metabolism; Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-5074; LEU-DEG2-PWY;
metacyc_pathway_name mevalonate degradation;; L-leucine degradation I;;
metacyc_pathway_type CARBOXYLATES-DEG;; LEUCINE-DEG;;
pfam_acc PF00682;
pfam_desc HMGL-like;
pfam_id HMGL-like;
pfam_target db:Pfam-A.hmm|PF00682.19 evalue:3.5e-49 score:167.0 best_domain_score:166.8 name:HMGL-like;
sprot_desc Hydroxymethylglutaryl-CoA lyase;
sprot_id sp|P13703|HMGCL_PSEMV;
sprot_target db:uniprot_sprot|sp|P13703|HMGCL_PSEMV 1 272 evalue:1.0e-79 qcov:95.40 identity:56.60;
119578 118946 CDS
ID metaerg.pl|01542
allgo_ids GO:0005515;
allko_ids K00799; K04097;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657572.1 1 209 evalue:2.6e-81 qcov:99.50 identity:74.60;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF02798; PF13409; PF13417;
pfam_desc Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_N; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF02798.20 evalue:1.5e-15 score:56.5 best_domain_score:55.9 name:GST_N; db:Pfam-A.hmm|PF13409.6 evalue:4.1e-07 score:29.4 best_domain_score:28.6 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:2.1e-10 score:40.1 best_domain_score:39.5 name:GST_N_3;
121586 119658 CDS
ID metaerg.pl|01543
allec_ids 6.4.1.4;
allgo_ids GO:0005524; GO:0002169; GO:1905202; GO:0005743; GO:0005759; GO:0005739; GO:0046872; GO:0004485; GO:0006552;
allko_ids K01941; K01457; K01955; K01959; K11541; K01571; K01965; K01966; K08289; K01960; K01958; K01968; K03416; K14541; K01964; K00658;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796920.1 1 642 evalue:5.5e-284 qcov:100.00 identity:79.30;
kegg_pathway_id 00310; 00280; 00230; 00670; 00240; 00020; 00791; 00330; 00620; 00252; 00220; 00251; 00640;
kegg_pathway_name Lysine degradation; Valine, leucine and isoleucine degradation; Purine metabolism; One carbon pool by folate; Pyrimidine metabolism; Citrate cycle (TCA cycle); Atrazine degradation; Arginine and proline metabolism; Pyruvate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Glutamate metabolism; Propanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id LEU-DEG2-PWY;
metacyc_pathway_name L-leucine degradation I;;
metacyc_pathway_type LEUCINE-DEG;;
pfam_acc PF02222; PF02785; PF00289; PF00364; PF13533; PF02786; PF07478;
pfam_desc ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Biotin-requiring enzyme; Biotin-lipoyl like; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus;
pfam_id ATP-grasp; Biotin_carb_C; Biotin_carb_N; Biotin_lipoyl; Biotin_lipoyl_2; CPSase_L_D2; Dala_Dala_lig_C;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:6.8e-07 score:28.2 best_domain_score:27.5 name:ATP-grasp; db:Pfam-A.hmm|PF02785.19 evalue:3.2e-32 score:110.1 best_domain_score:108.7 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:1.2e-44 score:150.6 best_domain_score:147.0 name:Biotin_carb_N; db:Pfam-A.hmm|PF00364.22 evalue:3e-15 score:55.0 best_domain_score:53.9 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:2.9e-07 score:29.4 best_domain_score:20.0 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF02786.17 evalue:4.9e-73 score:244.3 best_domain_score:243.6 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:8.7e-09 score:34.4 best_domain_score:32.7 name:Dala_Dala_lig_C;
sprot_desc Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial;
sprot_id sp|Q99MR8|MCCA_MOUSE;
sprot_target db:uniprot_sprot|sp|Q99MR8|MCCA_MOUSE 4 641 evalue:3.0e-151 qcov:99.40 identity:47.40;
123330 121714 CDS
ID metaerg.pl|01544
allec_ids 6.4.1.4;
allgo_ids GO:1905202; GO:0005759; GO:0005739; GO:0005524; GO:0004485; GO:0015936; GO:0006552;
allko_ids K01963; K03416; K15052; K01959; K01571; K01966; K15036; K01969;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796919.1 1 538 evalue:3.9e-267 qcov:100.00 identity:87.00;
kegg_pathway_id 00020; 00280; 00253; 00640; 00061; 00252; 00620; 00330;
kegg_pathway_name Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation; Tetracycline biosynthesis; Propanoate metabolism; Fatty acid biosynthesis; Alanine and aspartate metabolism; Pyruvate metabolism; Arginine and proline metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id LEU-DEG2-PWY;
metacyc_pathway_name L-leucine degradation I;;
metacyc_pathway_type LEUCINE-DEG;;
pfam_acc PF01039;
pfam_desc Carboxyl transferase domain;
pfam_id Carboxyl_trans;
pfam_target db:Pfam-A.hmm|PF01039.22 evalue:1.2e-141 score:471.9 best_domain_score:471.6 name:Carboxyl_trans;
sprot_desc Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial;
sprot_id sp|Q3ULD5|MCCB_MOUSE;
sprot_target db:uniprot_sprot|sp|Q3ULD5|MCCB_MOUSE 9 538 evalue:2.1e-190 qcov:98.50 identity:64.20;
123834 123340 CDS
ID metaerg.pl|01545
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480853.1 4 164 evalue:5.2e-53 qcov:98.20 identity:62.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF07007;
pfam_desc Lysozyme inhibitor LprI;
pfam_id LprI;
pfam_target db:Pfam-A.hmm|PF07007.12 evalue:4.4e-19 score:68.3 best_domain_score:67.8 name:LprI;
sp YES;
123340 123396 signal_peptide
ID metaerg.pl|01546
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
124994 123831 CDS
ID metaerg.pl|01547
allec_ids 1.3.8.4;
allgo_ids GO:0016627; GO:0055114; GO:0005759; GO:0005739; GO:0005524; GO:0050660; GO:0008470; GO:0009083; GO:0006552;
allko_ids K14448; K00248; K11410; K00253; K06446; K00252; K00232; K00120; K09478; K11538; K11731; K08098; K00249;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796918.1 1 387 evalue:3.5e-209 qcov:100.00 identity:94.80;
kegg_pathway_id 00592; 00640; 00650; 00903; 01040; 00632; 00380; 00361; 00071; 00410; 00930; 00626; 00310; 00624; 01031; 00280;
kegg_pathway_name alpha-Linolenic acid metabolism; Propanoate metabolism; Butanoate metabolism; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; Benzoate degradation via CoA ligation; Tryptophan metabolism; gamma-Hexachlorocyclohexane degradation; Fatty acid metabolism; beta-Alanine metabolism; Caprolactam degradation; Naphthalene and anthracene degradation; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Glycan structures - biosynthesis 2; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:4.7e-43 score:146.2 best_domain_score:145.1 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:6.9e-16 score:58.0 best_domain_score:58.0 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:3.6e-25 score:87.2 best_domain_score:86.2 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:2.4e-38 score:130.5 best_domain_score:129.1 name:Acyl-CoA_dh_N;
sprot_desc Isovaleryl-CoA dehydrogenase, mitochondrial;
sprot_id sp|Q9SWG0|IVD_ARATH;
sprot_target db:uniprot_sprot|sp|Q9SWG0|IVD_ARATH 3 382 evalue:1.6e-128 qcov:98.20 identity:61.00;
126394 125927 CDS
ID metaerg.pl|01548
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798760.1 1 154 evalue:4.3e-41 qcov:99.40 identity:59.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
sp YES;
tm_num 1;
125927 125986 signal_peptide
ID metaerg.pl|01549
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
126394 125927 transmembrane_helix
ID metaerg.pl|01550
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i125945-125998o;
127150 126422 CDS
ID metaerg.pl|01551
allgo_ids GO:0003774; GO:0009427; GO:0071973; GO:0009279;
allko_ids K02393;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798758.1 1 242 evalue:6.2e-103 qcov:100.00 identity:79.80;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF02107;
pfam_desc Flagellar L-ring protein;
pfam_id FlgH;
pfam_target db:Pfam-A.hmm|PF02107.16 evalue:3.8e-51 score:172.3 best_domain_score:172.0 name:FlgH;
sp YES;
sprot_desc Flagellar L-ring protein;
sprot_id sp|Q5LWX7|FLGH_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LWX7|FLGH_RUEPO 5 242 evalue:1.5e-71 qcov:98.30 identity:59.20;
126422 126469 lipoprotein_signal_peptide
ID metaerg.pl|01552
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
127632 127195 CDS
ID metaerg.pl|01553
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657696.1 1 143 evalue:3.9e-44 qcov:98.60 identity:73.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF13144; PF08666;
pfam_desc Chaperone for flagella basal body P-ring formation; SAF domain;
pfam_id ChapFlgA; SAF;
pfam_target db:Pfam-A.hmm|PF13144.6 evalue:3.6e-24 score:84.4 best_domain_score:84.2 name:ChapFlgA; db:Pfam-A.hmm|PF08666.12 evalue:5.7e-06 score:26.1 best_domain_score:25.4 name:SAF;
sp YES;
tigrfam_acc TIGR03170;
tigrfam_desc flagella basal body P-ring formation protein FlgA;
tigrfam_mainrole Cellular processes;
tigrfam_name flgA_cterm;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR03170 evalue:1.3e-30 score:105.3 best_domain_score:105.1 name:TIGR03170;
127195 127251 signal_peptide
ID metaerg.pl|01554
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
128417 127632 CDS
ID metaerg.pl|01555
allgo_ids GO:0071973; GO:0009426;
allko_ids K02392;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798754.1 1 261 evalue:1.0e-127 qcov:100.00 identity:89.70;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF06429; PF00460;
pfam_desc Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein;
pfam_id Flg_bbr_C; Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF06429.13 evalue:1.4e-24 score:85.3 best_domain_score:82.2 name:Flg_bbr_C; db:Pfam-A.hmm|PF00460.20 evalue:1.7e-11 score:43.1 best_domain_score:41.5 name:Flg_bb_rod;
sprot_desc Flagellar basal-body rod protein FlgG;
sprot_id sp|Q06172|FLGG_CAUVC;
sprot_target db:uniprot_sprot|sp|Q06172|FLGG_CAUVC 1 261 evalue:3.4e-69 qcov:100.00 identity:52.10;
tigrfam_acc TIGR02488; TIGR03506;
tigrfam_desc flagellar basal-body rod protein FlgG; flagellar hook-basal body protein;
tigrfam_mainrole Cellular processes;
tigrfam_name flgG_G_neg; FlgEFG_subfam;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR02488 evalue:5.9e-96 score:320.1 best_domain_score:319.9 name:TIGR02488; db:TIGRFAMs.hmm|TIGR03506 evalue:5.8e-70 score:235.9 best_domain_score:137.6 name:TIGR03506;
129153 128437 CDS
ID metaerg.pl|01556
allgo_ids GO:0071973; GO:0030694;
allko_ids K02391;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798752.1 1 238 evalue:8.5e-105 qcov:100.00 identity:79.80;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF06429; PF00460;
pfam_desc Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein;
pfam_id Flg_bbr_C; Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF06429.13 evalue:1.1e-12 score:47.1 best_domain_score:45.9 name:Flg_bbr_C; db:Pfam-A.hmm|PF00460.20 evalue:2.1e-06 score:26.8 best_domain_score:26.0 name:Flg_bb_rod;
sprot_desc Flagellar basal-body rod protein FlgF;
sprot_id sp|Q06171|FLGF_CAUVC;
sprot_target db:uniprot_sprot|sp|Q06171|FLGF_CAUVC 1 238 evalue:1.1e-37 qcov:100.00 identity:36.50;
tigrfam_acc TIGR03506;
tigrfam_desc flagellar hook-basal body protein;
tigrfam_name FlgEFG_subfam;
tigrfam_target db:TIGRFAMs.hmm|TIGR03506 evalue:3.6e-48 score:164.2 best_domain_score:120.0 name:TIGR03506;
129423 129157 CDS
ID metaerg.pl|01557
allgo_ids GO:0009306; GO:0016020; GO:0009425; GO:0016021; GO:0005886; GO:0044780;
allko_ids K02420;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798750.1 1 87 evalue:1.5e-30 qcov:98.90 identity:85.10;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01313;
pfam_desc Bacterial export proteins, family 3;
pfam_id Bac_export_3;
pfam_target db:Pfam-A.hmm|PF01313.19 evalue:6.1e-26 score:89.4 best_domain_score:89.2 name:Bac_export_3;
sprot_desc Flagellar biosynthetic protein FliQ;
sprot_id sp|P74931|FLIQ_TREPA;
sprot_target db:uniprot_sprot|sp|P74931|FLIQ_TREPA 1 86 evalue:6.1e-07 qcov:97.70 identity:37.50;
tm_num 2;
129423 129157 transmembrane_helix
ID metaerg.pl|01558
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i129193-129261o129319-129387i;
129717 129427 CDS
ID metaerg.pl|01559
allgo_ids GO:0003774; GO:0005198; GO:0009288; GO:0071973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798748.1 1 96 evalue:2.6e-28 qcov:100.00 identity:81.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF02049;
pfam_desc Flagellar hook-basal body complex protein FliE;
pfam_id FliE;
pfam_target db:Pfam-A.hmm|PF02049.18 evalue:1.8e-14 score:52.9 best_domain_score:52.6 name:FliE;
130137 129745 CDS
ID metaerg.pl|01560
allgo_ids GO:0071973; GO:0009425; GO:0030694;
allko_ids K02388;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798746.1 1 130 evalue:1.6e-57 qcov:100.00 identity:87.70;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF06429; PF00460;
pfam_desc Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein;
pfam_id Flg_bbr_C; Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF06429.13 evalue:6.1e-06 score:25.5 best_domain_score:24.8 name:Flg_bbr_C; db:Pfam-A.hmm|PF00460.20 evalue:2.5e-08 score:32.9 best_domain_score:32.2 name:Flg_bb_rod;
sprot_desc Flagellar basal-body rod protein FlgC;
sprot_id sp|Q44336|FLGC_AGRFC;
sprot_target db:uniprot_sprot|sp|Q44336|FLGC_AGRFC 1 129 evalue:1.4e-23 qcov:99.20 identity:45.60;
130529 130149 CDS
ID metaerg.pl|01561
allgo_ids GO:0071973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798742.1 1 126 evalue:1.7e-40 qcov:100.00 identity:71.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00460;
pfam_desc Flagella basal body rod protein;
pfam_id Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF00460.20 evalue:1.8e-06 score:27.0 best_domain_score:25.7 name:Flg_bb_rod;
130618 131970 CDS
ID metaerg.pl|01562
allec_ids 7.1.2.2; 3.6.3.14;
allgo_ids GO:0005524; GO:0009288; GO:0005737; GO:0030257; GO:0016887; GO:0006754; GO:0044780; GO:0030254; GO:1902600;
allko_ids K02412;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799271.1 4 442 evalue:1.1e-211 qcov:97.60 identity:84.10;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id DENOVOPURINE2-PWY; PRPP-PWY; PWY-6126;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00006; PF18269;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; T3SS EscN ATPase C-terminal domain;
pfam_id ATP-synt_ab; T3SS_ATPase_C;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:2.9e-64 score:215.8 best_domain_score:215.5 name:ATP-synt_ab; db:Pfam-A.hmm|PF18269.1 evalue:1.5e-11 score:43.2 best_domain_score:42.3 name:T3SS_ATPase_C;
sprot_desc Flagellum-specific ATP synthase;
sprot_id sp|P0CAT8|FLII_CAUVC;
sprot_target db:uniprot_sprot|sp|P0CAT8|FLII_CAUVC 9 417 evalue:1.9e-96 qcov:90.90 identity:45.70;
tigrfam_acc TIGR01026;
tigrfam_desc ATPase, FliI/YscN family;
tigrfam_mainrole Energy metabolism;
tigrfam_name fliI_yscN;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01026 evalue:6e-130 score:433.0 best_domain_score:432.8 name:TIGR01026;
132038 133753 CDS
ID metaerg.pl|01563
allec_ids 6.1.1.10;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0046872; GO:0004825; GO:0006431;
allko_ids K01874;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799270.1 1 571 evalue:0.0e+00 qcov:100.00 identity:90.50;
kegg_pathway_id 00970; 00450; 00271;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Selenoamino acid metabolism; Methionine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00133; PF09334;
pfam_desc tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M);
pfam_id tRNA-synt_1; tRNA-synt_1g;
pfam_target db:Pfam-A.hmm|PF00133.22 evalue:4.6e-08 score:31.0 best_domain_score:17.2 name:tRNA-synt_1; db:Pfam-A.hmm|PF09334.11 evalue:3.6e-142 score:472.9 best_domain_score:472.7 name:tRNA-synt_1g;
sprot_desc Methionine--tRNA ligase;
sprot_id sp|A8LIJ9|SYM_DINSH;
sprot_target db:uniprot_sprot|sp|A8LIJ9|SYM_DINSH 1 571 evalue:3.2e-282 qcov:100.00 identity:79.30;
tigrfam_acc TIGR00398;
tigrfam_desc methionine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name metG;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00398 evalue:3.6e-136 score:454.1 best_domain_score:453.9 name:TIGR00398;
134117 133758 CDS
ID metaerg.pl|01564
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798738.1 1 118 evalue:8.7e-34 qcov:99.20 identity:60.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
sp YES;
133758 133814 signal_peptide
ID metaerg.pl|01565
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
134244 134498 CDS
ID metaerg.pl|01566
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798737.1 1 81 evalue:3.4e-32 qcov:96.40 identity:92.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
134609 135985 CDS
ID metaerg.pl|01567
allec_ids 2.6.1.76;
allgo_ids GO:0008483; GO:0030170; GO:0005737; GO:0045303; GO:0042400;
allko_ids K15785;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798735.1 1 457 evalue:1.4e-241 qcov:99.80 identity:88.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-761; PWY-6565; P101-PWY; PWY-6409; PWY-6562;
metacyc_pathway_name rhizobactin 1021 biosynthesis;; superpathway of polyamine biosynthesis III;; ectoine biosynthesis;; pyoverdine I biosynthesis;; norspermidine biosynthesis;;
metacyc_pathway_type Siderophores-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis;; Siderophores-Biosynthesis;; Polyamine-Biosynthesis;;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:7.7e-79 score:264.4 best_domain_score:264.2 name:Aminotran_3;
sprot_desc Diaminobutyrate--2-oxoglutarate transaminase;
sprot_id sp|E1V7V7|DOED_HALED;
sprot_target db:uniprot_sprot|sp|E1V7V7|DOED_HALED 1 455 evalue:1.7e-148 qcov:99.30 identity:55.10;
136042 137223 CDS
ID metaerg.pl|01568
allec_ids 3.5.4.44;
allgo_ids GO:0016787; GO:0005737; GO:0016812; GO:0042400;
allko_ids K15783;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246121.1 1 393 evalue:1.5e-220 qcov:100.00 identity:91.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01321; PF00557;
pfam_desc Creatinase/Prolidase N-terminal domain; Metallopeptidase family M24;
pfam_id Creatinase_N; Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF01321.18 evalue:3.1e-19 score:69.2 best_domain_score:68.4 name:Creatinase_N; db:Pfam-A.hmm|PF00557.24 evalue:6.5e-30 score:103.6 best_domain_score:103.0 name:Peptidase_M24;
sprot_desc Ectoine hydrolase;
sprot_id sp|E1V7W1|DOEA_HALED;
sprot_target db:uniprot_sprot|sp|E1V7W1|DOEA_HALED 8 393 evalue:2.0e-129 qcov:98.20 identity:57.80;
137771 137331 CDS
ID metaerg.pl|01569
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798728.1 1 139 evalue:9.0e-41 qcov:95.20 identity:60.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF06073;
pfam_desc Bacterial protein of unknown function (DUF934);
pfam_id DUF934;
pfam_target db:Pfam-A.hmm|PF06073.12 evalue:1.7e-19 score:68.9 best_domain_score:68.6 name:DUF934;
138502 137768 CDS
ID metaerg.pl|01570
allec_ids 1.8.4.8;
allgo_ids GO:0003824; GO:0005737; GO:0004604; GO:0070814; GO:0019379;
allko_ids K00390;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798727.1 1 244 evalue:4.0e-102 qcov:100.00 identity:75.00;
kegg_pathway_id 00920;
kegg_pathway_name Sulfur metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-5345; SULFATE-CYS-PWY; PWY-821;
metacyc_pathway_name superpathway of L-methionine biosynthesis (by sulfhydrylation);; superpathway of sulfate assimilation and cysteine biosynthesis;; superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae);;
metacyc_pathway_type Methionine-De-novo-Biosynthesis; Super-Pathways;; Sulfur-Metabolism; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF01507;
pfam_desc Phosphoadenosine phosphosulfate reductase family;
pfam_id PAPS_reduct;
pfam_target db:Pfam-A.hmm|PF01507.19 evalue:3.2e-39 score:134.0 best_domain_score:133.7 name:PAPS_reduct;
sprot_desc Phosphoadenosine phosphosulfate reductase;
sprot_id sp|Q11B66|CYSH_CHESB;
sprot_target db:uniprot_sprot|sp|Q11B66|CYSH_CHESB 34 232 evalue:1.3e-54 qcov:81.60 identity:53.50;
tigrfam_acc TIGR00434;
tigrfam_desc phosophoadenylyl-sulfate reductase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name cysH;
tigrfam_sub1role Sulfur metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR00434 evalue:7.9e-53 score:178.6 best_domain_score:178.4 name:TIGR00434;
140153 138492 CDS
ID metaerg.pl|01571
allec_ids 1.8.7.1;
allgo_ids GO:0016491; GO:0020037; GO:0051536; GO:0055114; GO:0051539; GO:0046872; GO:0050311;
allko_ids K11180; K00381; K00366; K00392; K00363; K00362; K11181; K00441;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798725.1 1 553 evalue:1.9e-285 qcov:100.00 identity:87.90;
kegg_pathway_id 00790; 00633; 00920; 00910; 00450;
kegg_pathway_name Folate biosynthesis; Trinitrotoluene degradation; Sulfur metabolism; Nitrogen metabolism; Selenoamino acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id SULFMETII-PWY;
metacyc_pathway_name assimilatory sulfate reduction II;;
metacyc_pathway_type Assimilatory-Sulfate-Reduction;;
pfam_acc PF01077; PF03460;
pfam_desc Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain;
pfam_id NIR_SIR; NIR_SIR_ferr;
pfam_target db:Pfam-A.hmm|PF01077.22 evalue:7.3e-53 score:177.6 best_domain_score:142.8 name:NIR_SIR; db:Pfam-A.hmm|PF03460.17 evalue:4.2e-36 score:121.9 best_domain_score:61.0 name:NIR_SIR_ferr;
sprot_desc Sulfite reductase [ferredoxin] 2;
sprot_id sp|Q73XV0|SIR2_MYCPA;
sprot_target db:uniprot_sprot|sp|Q73XV0|SIR2_MYCPA 1 527 evalue:3.6e-36 qcov:95.30 identity:25.90;
140508 140203 CDS
ID metaerg.pl|01572
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798723.1 1 101 evalue:1.1e-37 qcov:100.00 identity:79.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF11011;
pfam_desc Protein of unknown function (DUF2849);
pfam_id DUF2849;
pfam_target db:Pfam-A.hmm|PF11011.8 evalue:7.5e-29 score:99.5 best_domain_score:99.3 name:DUF2849;
141884 140505 CDS
ID metaerg.pl|01573
allec_ids 2.1.1.107; 1.3.1.76; 4.99.1.4;
allgo_ids GO:0006779; GO:0055114; GO:0051287; GO:0043115; GO:0051266; GO:0004851; GO:0009236; GO:0019354;
allko_ids K02302;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798721.1 1 457 evalue:9.0e-196 qcov:99.60 identity:79.00;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-5196; PWY-5194; P381-PWY;
metacyc_pathway_name factor 430 biosynthesis;; siroheme biosynthesis;; adenosylcobalamin biosynthesis II (aerobic);;
metacyc_pathway_type Cofactor-Biosynthesis;; Porphyrin-Compounds-Biosynthesis;; De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;;
pfam_acc PF10414; PF13241; PF00590;
pfam_desc Sirohaem synthase dimerisation region; Putative NAD(P)-binding; Tetrapyrrole (Corrin/Porphyrin) Methylases;
pfam_id CysG_dimeriser; NAD_binding_7; TP_methylase;
pfam_target db:Pfam-A.hmm|PF10414.9 evalue:2.9e-10 score:38.9 best_domain_score:37.6 name:CysG_dimeriser; db:Pfam-A.hmm|PF13241.6 evalue:1.3e-20 score:73.0 best_domain_score:69.3 name:NAD_binding_7; db:Pfam-A.hmm|PF00590.20 evalue:3.8e-41 score:140.6 best_domain_score:140.6 name:TP_methylase;
sprot_desc Siroheme synthase;
sprot_id sp|Q7NZV7|CYSG_CHRVO;
sprot_target db:uniprot_sprot|sp|Q7NZV7|CYSG_CHRVO 1 451 evalue:3.3e-80 qcov:98.30 identity:41.20;
tigrfam_acc TIGR01469; TIGR01470;
tigrfam_desc uroporphyrinogen-III C-methyltransferase; siroheme synthase, N-terminal domain;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cobA_cysG_Cterm; cysG_Nterm;
tigrfam_sub1role Heme, porphyrin, and cobalamin; Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01469 evalue:5e-71 score:238.4 best_domain_score:237.8 name:TIGR01469; db:TIGRFAMs.hmm|TIGR01470 evalue:3.1e-50 score:169.9 best_domain_score:168.7 name:TIGR01470;
142879 142106 CDS
ID metaerg.pl|01574
allgo_ids GO:0016020; GO:0055085;
allko_ids K02050;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481151.1 1 257 evalue:4.6e-133 qcov:100.00 identity:93.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:5.6e-17 score:61.3 best_domain_score:61.3 name:BPD_transp_1;
tm_num 6;
142879 142106 transmembrane_helix
ID metaerg.pl|01575
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i142124-142192o142298-142366i142385-142453o142481-142549i142640-142708o142766-142834i;
143673 142876 CDS
ID metaerg.pl|01576
allgo_ids GO:0005524; GO:0016887;
allko_ids K11076; K05816; K10112; K01998; K10111; K02031; K02049; K02065; K01995; K11962; K02000; K02023; K01990; K02017; K02032; K02006; K02052; K05847; K02010; K02003; K01997; K02045; K11072; K02062; K01996; K02071; K06861;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470727.1 1 265 evalue:8.4e-138 qcov:100.00 identity:91.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.1e-31 score:109.4 best_domain_score:108.9 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein MJ0412;
sprot_id sp|Q57855|Y412_METJA;
sprot_target db:uniprot_sprot|sp|Q57855|Y412_METJA 5 230 evalue:1.5e-48 qcov:85.30 identity:41.20;
144729 143725 CDS
ID metaerg.pl|01577
allko_ids K02051;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798716.1 1 334 evalue:8.9e-169 qcov:100.00 identity:89.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF09084;
pfam_desc NMT1/THI5 like;
pfam_id NMT1;
pfam_target db:Pfam-A.hmm|PF09084.11 evalue:2.3e-43 score:147.9 best_domain_score:147.5 name:NMT1;
sp YES;
143725 143787 signal_peptide
ID metaerg.pl|01578
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
145031 146260 CDS
ID metaerg.pl|01579
allec_ids 2.3.1.41;
allgo_ids GO:0005737; GO:0004315; GO:0006633;
allko_ids K00647;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480472.1 1 409 evalue:5.5e-221 qcov:100.00 identity:94.90;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-5989; BIOTIN-BIOSYNTHESIS-PWY; PWYG-321; FASYN-INITIAL-PWY; PWY-6113; PWY-6285; PWY-6282; PWY0-881; PWY-5965; PWY-5966; PWY-5971; PWY-5156; FASYN-ELONG-PWY; PWY-6519;
metacyc_pathway_name stearate biosynthesis II (bacteria and plants);; biotin biosynthesis I;; mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate);; superpathway of fatty acid biosynthesis I (E. coli);; fatty acid biosynthesis initiation III;; fatty acid biosynthesis initiation II;; palmitate biosynthesis II (bacteria and plants);; superpathway of fatty acid biosynthesis II (plant);; fatty acid elongation -- saturated;; 8-amino-7-oxononanoate biosynthesis I;;
metacyc_pathway_type Stearate-Biosynthesis;; BIOTIN-SYN; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Palmitoleate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis;; Palmitate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;;
pfam_acc PF00109; PF02801;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain;
pfam_id ketoacyl-synt; Ketoacyl-synt_C;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:1.4e-43 score:148.6 best_domain_score:147.7 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:4.3e-29 score:100.2 best_domain_score:97.3 name:Ketoacyl-synt_C;
sp YES;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] synthase 1;
sprot_id sp|Q02K94|FABB_PSEAB;
sprot_target db:uniprot_sprot|sp|Q02K94|FABB_PSEAB 1 408 evalue:2.0e-145 qcov:99.80 identity:64.20;
145031 145090 signal_peptide
ID metaerg.pl|01580
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
146271 147059 CDS
ID metaerg.pl|01581
allec_ids 1.3.1.9;
allgo_ids GO:0005886; GO:0004318; GO:0016631; GO:0006633;
allko_ids K00208;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798625.1 1 262 evalue:9.6e-134 qcov:100.00 identity:93.50;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-5971; PWY-5989; PWY-5156; PWY-6113; PWY-6285; PWY0-881; FASYN-ELONG-PWY;
metacyc_pathway_name palmitate biosynthesis II (bacteria and plants);; stearate biosynthesis II (bacteria and plants);; superpathway of fatty acid biosynthesis II (plant);; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; superpathway of fatty acid biosynthesis I (E. coli);; fatty acid elongation -- saturated;;
metacyc_pathway_type Palmitate-Biosynthesis;; Stearate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00106; PF13561;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase;
pfam_id adh_short; adh_short_C2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:4.7e-19 score:67.8 best_domain_score:67.1 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:1.6e-81 score:272.6 best_domain_score:272.4 name:adh_short_C2;
sprot_desc Enoyl-[acyl-carrier-protein] reductase [NADH] 2;
sprot_id sp|P58381|FABI2_RHIME;
sprot_target db:uniprot_sprot|sp|P58381|FABI2_RHIME 1 260 evalue:5.7e-85 qcov:99.20 identity:61.20;
147508 147107 CDS
ID metaerg.pl|01582
allgo_ids GO:0016021; GO:0005887; GO:0015103;
allko_ids K06199;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798623.1 10 119 evalue:8.8e-35 qcov:82.70 identity:72.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF02537;
pfam_desc CrcB-like protein, Camphor Resistance (CrcB);
pfam_id CRCB;
pfam_target db:Pfam-A.hmm|PF02537.15 evalue:6.1e-19 score:67.4 best_domain_score:67.1 name:CRCB;
sprot_desc Putative fluoride ion transporter CrcB;
sprot_id sp|A1BJH0|CRCB_CHLPD;
sprot_target db:uniprot_sprot|sp|A1BJH0|CRCB_CHLPD 8 118 evalue:1.5e-09 qcov:83.50 identity:40.20;
tm_num 4;
147508 147107 transmembrane_helix
ID metaerg.pl|01583
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i147125-147193o147203-147271i147305-147373o147386-147454i;
147891 147508 CDS
ID metaerg.pl|01584
allgo_ids GO:0016021; GO:0005887; GO:0015103;
allko_ids K06199;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798622.1 1 124 evalue:5.6e-23 qcov:97.60 identity:58.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF02537;
pfam_desc CrcB-like protein, Camphor Resistance (CrcB);
pfam_id CRCB;
pfam_target db:Pfam-A.hmm|PF02537.15 evalue:1.6e-15 score:56.4 best_domain_score:56.0 name:CRCB;
sprot_desc Putative fluoride ion transporter CrcB;
sprot_id sp|B6J723|CRCB_COXB1;
sprot_target db:uniprot_sprot|sp|B6J723|CRCB_COXB1 7 127 evalue:9.8e-06 qcov:95.30 identity:38.80;
tm_num 4;
147891 147508 transmembrane_helix
ID metaerg.pl|01585
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i147526-147585o147613-147681i147700-147768o147811-147879i;
147991 148707 CDS
ID metaerg.pl|01586
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798620.1 4 236 evalue:3.1e-67 qcov:97.90 identity:56.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01636; PF06293;
pfam_desc Phosphotransferase enzyme family; Lipopolysaccharide kinase (Kdo/WaaP) family;
pfam_id APH; Kdo;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:3.3e-07 score:29.7 best_domain_score:29.4 name:APH; db:Pfam-A.hmm|PF06293.14 evalue:7.3e-08 score:31.2 best_domain_score:24.9 name:Kdo;
150946 148781 CDS
ID metaerg.pl|01587
allec_ids 1.11.1.21; 1.11.1.6;
allgo_ids GO:0004601; GO:0006979; GO:0020037; GO:0055114; GO:0004096; GO:0046872; GO:0042744;
allko_ids K03782;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482039.1 1 721 evalue:0.0e+00 qcov:100.00 identity:89.70;
kegg_pathway_id 00380; 00680;
kegg_pathway_name Tryptophan metabolism; Methane metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id DETOX1-PWY; PWY-5506;
metacyc_pathway_name superoxide radicals degradation;; methanol oxidation to formaldehyde IV;;
metacyc_pathway_type REACTIVE-OXYGEN-SPECIES-DEGRADATION;; Methanol-Oxidation;;
pfam_acc PF00141;
pfam_desc Peroxidase;
pfam_id peroxidase;
pfam_target db:Pfam-A.hmm|PF00141.23 evalue:1.9e-84 score:282.1 best_domain_score:157.8 name:peroxidase;
sprot_desc Catalase-peroxidase;
sprot_id sp|B8GPM6|KATG_THISH;
sprot_target db:uniprot_sprot|sp|B8GPM6|KATG_THISH 6 720 evalue:0.0e+00 qcov:99.20 identity:79.20;
tigrfam_acc TIGR00198;
tigrfam_desc catalase/peroxidase HPI;
tigrfam_mainrole Cellular processes;
tigrfam_name cat_per_HPI;
tigrfam_sub1role Detoxification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00198 evalue:0 score:1159.3 best_domain_score:1159.1 name:TIGR00198;
152073 151081 CDS
ID metaerg.pl|01588
allec_ids 1.-.-.-;
allgo_ids GO:0055114; GO:0005829; GO:0070402; GO:0003960; GO:0042803; GO:0048038; GO:0006739; GO:0042981;
allko_ids K00001; K13953; K10133;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799259.1 1 330 evalue:7.5e-160 qcov:100.00 identity:88.20;
kegg_pathway_id 00071; 04115; 00350; 00120; 00010; 00624; 00641;
kegg_pathway_name Fatty acid metabolism; p53 signaling pathway; Tyrosine metabolism; Bile acid biosynthesis; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; 3-Chloroacrylic acid degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY-5271; PWY-4302; PWY-2821; PWY-5826; PWY-5479; PWY-5987; PWY-5469; PWYG-321; PWY-6113;
metacyc_pathway_name abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; sesamin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF08240; PF00107; PF13602;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N; ADH_zinc_N_2;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:3.4e-09 score:35.8 best_domain_score:32.2 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:3e-26 score:91.2 best_domain_score:90.6 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:3.5e-23 score:82.3 best_domain_score:80.7 name:ADH_zinc_N_2;
sprot_desc Quinone oxidoreductase PIG3;
sprot_id sp|Q53FA7|QORX_HUMAN;
sprot_target db:uniprot_sprot|sp|Q53FA7|QORX_HUMAN 7 328 evalue:9.5e-61 qcov:97.60 identity:39.00;
tigrfam_acc TIGR02824;
tigrfam_desc putative NAD(P)H quinone oxidoreductase, PIG3 family;
tigrfam_mainrole Unknown function;
tigrfam_name quinone_pig3;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR02824 evalue:8.1e-141 score:467.9 best_domain_score:467.7 name:TIGR02824;
153014 152151 CDS
ID metaerg.pl|01589
allec_ids 2.6.1.42;
allgo_ids GO:0003824; GO:0052656; GO:0052654; GO:0052655; GO:0009097; GO:0009098; GO:0009099;
allko_ids K00826;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798607.1 1 286 evalue:5.2e-141 qcov:99.70 identity:87.10;
kegg_pathway_id 00280; 00290; 00770;
kegg_pathway_name Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id LEU-DEG2-PWY; BRANCHED-CHAIN-AA-SYN-PWY; PWY0-1061; LEUSYN-PWY; PWY-5057; PWY-5078; VALSYN-PWY; PWY-5076; ILEUDEG-PWY; ILEUSYN-PWY; PWY-5103; PWY-5104; PWY-3001; PWY-5108; ALANINE-VALINESYN-PWY; THREOCAT-PWY; VALDEG-PWY; PWY-5101;
metacyc_pathway_name L-leucine degradation I;; superpathway of branched chain amino acid biosynthesis;; superpathway of L-alanine biosynthesis;; L-leucine biosynthesis;; L-valine degradation II;; L-isoleucine degradation II;; L-valine biosynthesis;; L-leucine degradation III;; L-isoleucine degradation I;; L-isoleucine biosynthesis I (from threonine);; L-isoleucine biosynthesis III;; L-isoleucine biosynthesis IV;; superpathway of L-isoleucine biosynthesis I;; L-isoleucine biosynthesis V;; L-alanine biosynthesis I;; superpathway of L-threonine metabolism;; L-valine degradation I;; L-isoleucine biosynthesis II;;
metacyc_pathway_type LEUCINE-DEG;; Amino-Acid-Biosynthesis; Super-Pathways;; ALANINE-SYN; Super-Pathways;; LEUCINE-SYN;; VALINE-DEG;; ISOLEUCINE-DEG;; VALINE-BIOSYNTHESIS;; LEUCINE-DEG;; ISOLEUCINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; ISOLEUCINE-SYN;; ALANINE-SYN;; Super-Pathways; THREONINE-DEG;; VALINE-DEG;; ISOLEUCINE-SYN;;
pfam_acc PF01063;
pfam_desc Amino-transferase class IV;
pfam_id Aminotran_4;
pfam_target db:Pfam-A.hmm|PF01063.19 evalue:1.8e-41 score:141.7 best_domain_score:141.5 name:Aminotran_4;
sprot_desc Probable branched-chain-amino-acid aminotransferase;
sprot_id sp|Q1RIJ2|ILVE_RICBR;
sprot_target db:uniprot_sprot|sp|Q1RIJ2|ILVE_RICBR 10 257 evalue:2.8e-24 qcov:86.40 identity:28.70;
153762 153073 CDS
ID metaerg.pl|01590
allgo_ids GO:0005743; GO:0005739; GO:0008289; GO:0042803; GO:0006120; GO:0006744;
allko_ids K18587;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482036.1 1 229 evalue:2.6e-103 qcov:100.00 identity:79.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF08511;
pfam_desc COQ9;
pfam_id COQ9;
pfam_target db:Pfam-A.hmm|PF08511.11 evalue:2.5e-32 score:109.7 best_domain_score:109.0 name:COQ9;
sprot_desc Ubiquinone biosynthesis protein COQ9, mitochondrial;
sprot_id sp|Q8K1Z0|COQ9_MOUSE;
sprot_target db:uniprot_sprot|sp|Q8K1Z0|COQ9_MOUSE 7 179 evalue:1.2e-17 qcov:75.50 identity:32.10;
tigrfam_acc TIGR02396;
tigrfam_desc rpsU-divergently transcribed protein;
tigrfam_mainrole Unknown function;
tigrfam_name diverge_rpsU;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR02396 evalue:1.1e-54 score:184.3 best_domain_score:184.1 name:TIGR02396;
153871 154077 CDS
ID metaerg.pl|01591
allgo_ids GO:0003735; GO:0005840; GO:0006412;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470372.1 1 68 evalue:4.7e-24 qcov:100.00 identity:98.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01165;
pfam_desc Ribosomal protein S21;
pfam_id Ribosomal_S21;
pfam_target db:Pfam-A.hmm|PF01165.20 evalue:1.7e-20 score:71.7 best_domain_score:71.7 name:Ribosomal_S21;
tigrfam_acc TIGR00030;
tigrfam_desc ribosomal protein bS21;
tigrfam_mainrole Protein synthesis;
tigrfam_name S21p;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00030 evalue:1.3e-19 score:68.9 best_domain_score:68.9 name:TIGR00030;
154893 154204 CDS
ID metaerg.pl|01592
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470373.1 1 228 evalue:2.5e-82 qcov:99.60 identity:69.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00565;
pfam_desc Staphylococcal nuclease homologue;
pfam_id SNase;
pfam_target db:Pfam-A.hmm|PF00565.17 evalue:2.2e-10 score:40.2 best_domain_score:39.5 name:SNase;
sp YES;
154204 154260 signal_peptide
ID metaerg.pl|01593
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
156613 154949 CDS
ID metaerg.pl|01594
allec_ids 1.1.99.1;
allgo_ids GO:0016614; GO:0055114; GO:0008802; GO:0008812; GO:0050660; GO:0019285;
allko_ids K00120; K00108;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470375.1 1 536 evalue:9.3e-272 qcov:96.80 identity:84.30;
kegg_pathway_id 00903; 00626; 00624; 00632; 00260; 00361;
kegg_pathway_name Limonene and pinene degradation; Naphthalene and anthracene degradation; 1- and 2-Methylnaphthalene degradation; Benzoate degradation via CoA ligation; Glycine, serine and threonine metabolism; gamma-Hexachlorocyclohexane degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id BETSYN-PWY; CHOLINE-BETAINE-ANA-PWY; P542-PWY;
metacyc_pathway_name glycine betaine biosynthesis I (Gram-negative bacteria);; choline degradation I;; choline-O-sulfate degradation;;
metacyc_pathway_type Betaine-Biosynthesis;; Choline-Degradation;; Choline-Degradation; Super-Pathways;;
pfam_acc PF00890; PF05199; PF00732;
pfam_desc FAD binding domain; GMC oxidoreductase; GMC oxidoreductase;
pfam_id FAD_binding_2; GMC_oxred_C; GMC_oxred_N;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:2e-05 score:23.1 best_domain_score:20.6 name:FAD_binding_2; db:Pfam-A.hmm|PF05199.13 evalue:3.5e-41 score:140.3 best_domain_score:139.7 name:GMC_oxred_C; db:Pfam-A.hmm|PF00732.19 evalue:3.1e-82 score:275.5 best_domain_score:275.1 name:GMC_oxred_N;
sprot_desc Oxygen-dependent choline dehydrogenase;
sprot_id sp|A6X2G7|BETA_OCHA4;
sprot_target db:uniprot_sprot|sp|A6X2G7|BETA_OCHA4 3 527 evalue:1.9e-202 qcov:94.80 identity:64.70;
tigrfam_acc TIGR01810;
tigrfam_desc choline dehydrogenase;
tigrfam_mainrole Cellular processes;
tigrfam_name betA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01810 evalue:2.2e-227 score:755.1 best_domain_score:754.8 name:TIGR01810;
158160 156709 CDS
ID metaerg.pl|01595
allec_ids 1.2.1.8;
allgo_ids GO:0016491; GO:0055114; GO:0008802; GO:0046872; GO:0019285;
allko_ids K10217; K13821; K00155; K00318; K00130; K00149; K00151; K00128; K00294; K14085; K09472;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798598.1 1 483 evalue:8.5e-229 qcov:100.00 identity:84.10;
kegg_pathway_id 00251; 00410; 00631; 00340; 00071; 00622; 00626; 00281; 00280; 00310; 00624; 00010; 00260; 00903; 00220; 00620; 00330; 00362; 00561; 00350; 00650; 00640; 00641; 00380; 00120;
kegg_pathway_name Glutamate metabolism; beta-Alanine metabolism; 1,2-Dichloroethane degradation; Histidine metabolism; Fatty acid metabolism; Toluene and xylene degradation; Naphthalene and anthracene degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis; Glycine, serine and threonine metabolism; Limonene and pinene degradation; Urea cycle and metabolism of amino groups; Pyruvate metabolism; Arginine and proline metabolism; Benzoate degradation via hydroxylation; Glycerolipid metabolism; Tyrosine metabolism; Butanoate metabolism; Propanoate metabolism; 3-Chloroacrylic acid degradation; Tryptophan metabolism; Bile acid biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
metacyc_pathway_id PWY1F-353; BETSYN-PWY; CHOLINE-BETAINE-ANA-PWY; P542-PWY; PWY-3722;
metacyc_pathway_name glycine betaine biosynthesis III (plants);; glycine betaine biosynthesis I (Gram-negative bacteria);; choline degradation I;; choline-O-sulfate degradation;; glycine betaine biosynthesis II (Gram-positive bacteria);;
metacyc_pathway_type Betaine-Biosynthesis;; Betaine-Biosynthesis;; Choline-Degradation;; Choline-Degradation; Super-Pathways;; Betaine-Biosynthesis;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:1.3e-169 score:563.8 best_domain_score:563.6 name:Aldedh;
sprot_desc NAD/NADP-dependent betaine aldehyde dehydrogenase;
sprot_id sp|A3PI00|BETB_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PI00|BETB_RHOS1 1 483 evalue:2.0e-192 qcov:100.00 identity:70.00;
tigrfam_acc TIGR01804;
tigrfam_desc betaine-aldehyde dehydrogenase;
tigrfam_mainrole Cellular processes;
tigrfam_name BADH;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01804 evalue:3.6e-210 score:697.5 best_domain_score:697.3 name:TIGR01804;
158741 158157 CDS
ID metaerg.pl|01596
allgo_ids GO:0003677; GO:0003700; GO:0019285; GO:0045892;
allko_ids K02167;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480460.1 1 191 evalue:1.4e-78 qcov:98.50 identity:83.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF13977; PF00440;
pfam_desc BetI-type transcriptional repressor, C-terminal; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_6; TetR_N;
pfam_target db:Pfam-A.hmm|PF13977.6 evalue:4e-23 score:81.1 best_domain_score:80.3 name:TetR_C_6; db:Pfam-A.hmm|PF00440.23 evalue:1.3e-12 score:46.5 best_domain_score:46.5 name:TetR_N;
sprot_desc HTH-type transcriptional regulator BetI;
sprot_id sp|A6X2G6|BETI_OCHA4;
sprot_target db:uniprot_sprot|sp|A6X2G6|BETI_OCHA4 1 191 evalue:2.8e-44 qcov:98.50 identity:51.60;
tigrfam_acc TIGR03384;
tigrfam_desc transcriptional repressor BetI;
tigrfam_mainrole Regulatory functions;
tigrfam_name betaine_BetI;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR03384 evalue:2.6e-66 score:222.1 best_domain_score:221.9 name:TIGR03384;
158844 159773 CDS
ID metaerg.pl|01597
allgo_ids GO:0022857; GO:0043190; GO:0055085;
allko_ids K02001; K02002;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482034.1 5 309 evalue:6.8e-147 qcov:98.70 identity:85.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF04069;
pfam_desc Substrate binding domain of ABC-type glycine betaine transport system;
pfam_id OpuAC;
pfam_target db:Pfam-A.hmm|PF04069.12 evalue:2.4e-49 score:167.5 best_domain_score:167.3 name:OpuAC;
sp YES;
tigrfam_acc TIGR03414;
tigrfam_desc choline ABC transporter, periplasmic binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ABC_choline_bnd;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR03414 evalue:6.5e-127 score:421.9 best_domain_score:421.7 name:TIGR03414;
158844 158912 signal_peptide
ID metaerg.pl|01598
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
159830 160681 CDS
ID metaerg.pl|01599
allgo_ids GO:0016020; GO:0055085; GO:0043190; GO:0005887; GO:1902495; GO:0005275; GO:0015226; GO:0006865; GO:1902603; GO:0015871; GO:0031460;
allko_ids K02033; K02001;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480459.1 1 283 evalue:3.4e-129 qcov:100.00 identity:89.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.1e-24 score:86.4 best_domain_score:86.4 name:BPD_transp_1;
sprot_desc Glycine betaine transport system permease protein OpuAB;
sprot_id sp|P46921|OPUAB_BACSU;
sprot_target db:uniprot_sprot|sp|P46921|OPUAB_BACSU 13 283 evalue:1.7e-42 qcov:95.80 identity:41.90;
tigrfam_acc TIGR03416;
tigrfam_desc choline ABC transporter, permease protein;
tigrfam_name ABC_choXWV_perm;
tigrfam_target db:TIGRFAMs.hmm|TIGR03416 evalue:1e-114 score:381.7 best_domain_score:381.5 name:TIGR03416;
tm_num 5;
159830 160681 transmembrane_helix
ID metaerg.pl|01600
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
topology i160055-160123o160133-160201i160262-160330o160502-160570i160589-160648o;
160678 161715 CDS
ID metaerg.pl|01601
allgo_ids GO:0005524; GO:0043190; GO:0005275; GO:0016887; GO:0005034; GO:0006865; GO:0031460; GO:0006972;
allko_ids K02000; K10243; K02023; K10235; K05816; K11076; K02065; K01995; K02049; K10111; K01998; K10112; K11072; K02068; K02045; K02071; K06861; K01996; K11084; K02017; K02010; K05847; K02006; K02052;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798588.1 1 343 evalue:6.2e-157 qcov:99.40 identity:83.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:4.2e-10 score:39.2 best_domain_score:24.4 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.6e-28 score:99.1 best_domain_score:98.6 name:ABC_tran;
sprot_desc Glycine betaine/proline betaine transport system ATP-binding protein ProV;
sprot_id sp|P14175|PROV_ECOLI;
sprot_target db:uniprot_sprot|sp|P14175|PROV_ECOLI 6 343 evalue:3.8e-68 qcov:98.00 identity:44.10;
tigrfam_acc TIGR03415;
tigrfam_desc choline ABC transporter, ATP-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ABC_choXWV_ATP;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR03415 evalue:1.6e-152 score:507.0 best_domain_score:497.4 name:TIGR03415;
162570 161779 CDS
ID metaerg.pl|01602
allgo_ids GO:0003824; GO:0005739;
allko_ids K15016; K13767; K01692; K00022; K01782; K07516; K10527; K01825; K07515; K07514;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798586.1 1 262 evalue:5.5e-113 qcov:99.60 identity:81.30;
kegg_pathway_id 00380; 00632; 00930; 00280; 00281; 00310; 00640; 00650; 00592; 00410; 00071; 01040; 00062; 00903;
kegg_pathway_name Tryptophan metabolism; Benzoate degradation via CoA ligation; Caprolactam degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; Propanoate metabolism; Butanoate metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Biosynthesis of unsaturated fatty acids; Fatty acid elongation in mitochondria; Limonene and pinene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:9.2e-52 score:175.1 best_domain_score:174.9 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:3.3e-33 score:114.8 best_domain_score:112.7 name:ECH_2;
sprot_desc Enoyl-CoA hydratase domain-containing protein 3, mitochondrial;
sprot_id sp|A9JS71|ECHD3_XENLA;
sprot_target db:uniprot_sprot|sp|A9JS71|ECHD3_XENLA 13 261 evalue:1.1e-56 qcov:94.70 identity:45.80;
162647 163063 CDS
ID metaerg.pl|01603
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480456.1 3 137 evalue:1.6e-55 qcov:97.80 identity:83.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF03061;
pfam_desc Thioesterase superfamily;
pfam_id 4HBT;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:7.8e-11 score:41.4 best_domain_score:40.9 name:4HBT;
164026 163070 CDS
ID metaerg.pl|01604
allgo_ids GO:0003677; GO:0006355; GO:0019521;
allko_ids K06146;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482100.1 1 316 evalue:1.4e-158 qcov:99.40 identity:91.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF00356; PF00532; PF13377; PF13407;
pfam_desc Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of LacI family; Periplasmic binding protein-like domain; Periplasmic binding protein domain;
pfam_id LacI; Peripla_BP_1; Peripla_BP_3; Peripla_BP_4;
pfam_target db:Pfam-A.hmm|PF00356.21 evalue:5e-11 score:41.4 best_domain_score:40.6 name:LacI; db:Pfam-A.hmm|PF00532.21 evalue:6.4e-24 score:84.1 best_domain_score:83.6 name:Peripla_BP_1; db:Pfam-A.hmm|PF13377.6 evalue:3.4e-17 score:62.5 best_domain_score:59.4 name:Peripla_BP_3; db:Pfam-A.hmm|PF13407.6 evalue:4.9e-16 score:58.3 best_domain_score:57.7 name:Peripla_BP_4;
sprot_desc HTH-type transcriptional regulator IdnR;
sprot_id sp|P39343|IDNR_ECOLI;
sprot_target db:uniprot_sprot|sp|P39343|IDNR_ECOLI 1 315 evalue:1.6e-41 qcov:99.10 identity:32.60;
164809 164486 CDS
ID metaerg.pl|01605
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sedimentitalea;s__Sedimentitalea nanhaiensis;
genomedb_acc GCF_000473225.1;
genomedb_target db:genomedb|GCF_000473225.1|WP_027260364.1 32 107 evalue:1.9e-32 qcov:71.00 identity:96.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.338905; 190.553; 0.00644273; 0.402531; 191.3;
pfam_acc PF01695;
pfam_desc IstB-like ATP binding protein;
pfam_id IstB_IS21;
pfam_target db:Pfam-A.hmm|PF01695.17 evalue:1.8e-17 score:62.8 best_domain_score:62.3 name:IstB_IS21;
>Feature NODE_7_length_156761_cov_90.1325
424 53 CDS
ID metaerg.pl|01606
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium;s__Sphingobium sp002312805;
genomedb_acc GCF_002312805.1;
genomedb_target db:genomedb|GCF_002312805.1|WP_096063019.1 2 123 evalue:5.8e-49 qcov:99.20 identity:79.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
1177 803 CDS
ID metaerg.pl|01607
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger;s__Salipiger sp002300555;
genomedb_acc GCF_002300555.1;
genomedb_target db:genomedb|GCF_002300555.1|WP_095880504.1 1 123 evalue:5.0e-48 qcov:99.20 identity:74.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
1442 1191 CDS
ID metaerg.pl|01608
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
1693 1442 CDS
ID metaerg.pl|01609
allgo_ids GO:0043565;
allko_ids K00012; K01486;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Jannaschia;s__Jannaschia rubra;
genomedb_acc GCF_001403735.1;
genomedb_target db:genomedb|GCF_001403735.1|WP_074962800.1 1 83 evalue:7.7e-21 qcov:100.00 identity:68.70;
kegg_pathway_id 00230; 00040; 00500; 00520;
kegg_pathway_name Purine metabolism; Pentose and glucuronate interconversions; Starch and sucrose metabolism; Nucleotide sugars metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01381;
pfam_desc Helix-turn-helix;
pfam_id HTH_3;
pfam_target db:Pfam-A.hmm|PF01381.22 evalue:4.5e-10 score:38.7 best_domain_score:38.2 name:HTH_3;
1799 2572 CDS
ID metaerg.pl|01610
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF09140;
pfam_desc ATPase MipZ;
pfam_id MipZ;
pfam_target db:Pfam-A.hmm|PF09140.11 evalue:6.1e-06 score:24.9 best_domain_score:23.8 name:MipZ;
2569 3147 CDS
ID metaerg.pl|01611
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
tm_num 2;
2569 3147 transmembrane_helix
ID metaerg.pl|01612
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i2911-2970o2983-3051i;
3456 4040 CDS
ID metaerg.pl|01613
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
4304 4229 tRNA
ID metaerg.pl|01614
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
name tRNA_Lys_ttt;
4362 5264 CDS
ID metaerg.pl|01615
allec_ids 5.1.1.7;
allgo_ids GO:0008837; GO:0009089; GO:0005737;
allko_ids K01778;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794951.1 24 297 evalue:6.2e-129 qcov:91.30 identity:81.40;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-2941; PWY-5097; P4-PWY; PWY0-781; PWY-724; DAPLYSINESYN-PWY;
metacyc_pathway_name L-lysine biosynthesis II;; L-lysine biosynthesis VI;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; aspartate superpathway;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-lysine biosynthesis I;;
metacyc_pathway_type LYSINE-SYN;; LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;;
pfam_acc PF01678;
pfam_desc Diaminopimelate epimerase;
pfam_id DAP_epimerase;
pfam_target db:Pfam-A.hmm|PF01678.19 evalue:2e-49 score:166.0 best_domain_score:90.3 name:DAP_epimerase;
sprot_desc Diaminopimelate epimerase;
sprot_id sp|Q3IZB6|DAPF_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IZB6|DAPF_RHOS4 31 299 evalue:1.0e-101 qcov:89.70 identity:68.50;
tigrfam_acc TIGR00652;
tigrfam_desc diaminopimelate epimerase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name DapF;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00652 evalue:4.4e-72 score:241.9 best_domain_score:241.7 name:TIGR00652;
5261 6511 CDS
ID metaerg.pl|01616
allec_ids 2.8.4.5; 2.1.1.- 2.8.1.-;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0061712; GO:0006400;
allko_ids K18707;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794950.1 1 416 evalue:5.5e-208 qcov:100.00 identity:88.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF04055; PF00919;
pfam_desc Radical SAM superfamily; Uncharacterized protein family UPF0004;
pfam_id Radical_SAM; UPF0004;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:2.9e-20 score:72.6 best_domain_score:71.4 name:Radical_SAM; db:Pfam-A.hmm|PF00919.20 evalue:1.4e-16 score:59.6 best_domain_score:58.1 name:UPF0004;
sprot_desc Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB;
sprot_id sp|Q9ZDB6|MTAB_RICPR;
sprot_target db:uniprot_sprot|sp|Q9ZDB6|MTAB_RICPR 8 414 evalue:2.3e-112 qcov:97.80 identity:49.00;
tigrfam_acc TIGR00089; TIGR01579;
tigrfam_desc radical SAM methylthiotransferase, MiaB/RimO family; MiaB-like tRNA modifying enzyme;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00089; MiaB-like-C;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00089 evalue:7.5e-99 score:330.6 best_domain_score:330.4 name:TIGR00089; db:TIGRFAMs.hmm|TIGR01579 evalue:2.4e-132 score:441.2 best_domain_score:441.1 name:TIGR01579;
7218 6526 CDS
ID metaerg.pl|01617
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016021; GO:0005886; GO:0016887; GO:0048502; GO:0015888;
allko_ids K02071; K06861; K01996; K02045; K11072; K02062; K02052; K02006; K02010; K05847; K02032; K02017; K11084; K02023; K02018; K10243; K02000; K01998; K10112; K10111; K02049; K02065; K01995; K11076; K02193; K02013; K10235; K05816;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794949.1 1 230 evalue:6.3e-89 qcov:100.00 identity:76.50;
kegg_pathway_id 02010; 00910;
kegg_pathway_name ABC transporters - General; Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6166; PWY-6188; PWY-6171; PWY-6135; PWY-6113; PWYG-321;
metacyc_pathway_name ; ; ; ; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.1e-08 score:34.5 best_domain_score:16.5 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.9e-31 score:108.0 best_domain_score:107.6 name:ABC_tran;
sprot_desc Thiamine import ATP-binding protein ThiQ;
sprot_id sp|Q3IY12|THIQ_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IY12|THIQ_RHOS4 1 230 evalue:5.8e-73 qcov:100.00 identity:63.00;
8779 7205 CDS
ID metaerg.pl|01618
allgo_ids GO:0016021; GO:0005886; GO:0015888; GO:0055085;
allko_ids K02063;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794948.1 1 524 evalue:2.3e-240 qcov:100.00 identity:85.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
sprot_desc Thiamine transport system permease protein ThiP;
sprot_id sp|Q2YLW7|THIP_BRUA2;
sprot_target db:uniprot_sprot|sp|Q2YLW7|THIP_BRUA2 40 521 evalue:3.0e-77 qcov:92.00 identity:38.90;
tm_num 12;
8779 7205 transmembrane_helix
ID metaerg.pl|01619
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i7241-7309o7367-7426i7463-7531o7574-7642i7772-7840o7919-7987i8057-8125o8195-8263i8282-8350o8378-8446i8555-8623o8690-8746i;
9750 8776 CDS
ID metaerg.pl|01620
allgo_ids GO:0030288; GO:0030975; GO:0030976; GO:0015888; GO:0055085;
allko_ids K02064;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794947.1 1 324 evalue:2.5e-160 qcov:100.00 identity:83.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01547; PF13531; PF13343; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_11; SBP_bac_6; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:3.3e-11 score:42.9 best_domain_score:40.1 name:SBP_bac_1; db:Pfam-A.hmm|PF13531.6 evalue:2.9e-13 score:49.3 best_domain_score:48.9 name:SBP_bac_11; db:Pfam-A.hmm|PF13343.6 evalue:1.4e-19 score:69.7 best_domain_score:69.3 name:SBP_bac_6; db:Pfam-A.hmm|PF13416.6 evalue:4.1e-11 score:42.4 best_domain_score:42.2 name:SBP_bac_8;
sp YES;
sprot_desc Thiamine-binding periplasmic protein;
sprot_id sp|P31550|THIB_ECOLI;
sprot_target db:uniprot_sprot|sp|P31550|THIB_ECOLI 12 324 evalue:1.1e-69 qcov:96.60 identity:43.30;
tigrfam_acc TIGR01254;
tigrfam_desc ABC transporter periplasmic binding protein, thiB subfamily;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name sfuA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01254 evalue:4.1e-84 score:281.6 best_domain_score:281.3 name:TIGR01254;
8776 8832 signal_peptide
ID metaerg.pl|01621
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
9995 11104 CDS
ID metaerg.pl|01622
allec_ids 4.2.3.5;
allgo_ids GO:0004107; GO:0009073; GO:0009423;
allko_ids K01736;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794946.1 1 368 evalue:3.3e-196 qcov:99.70 identity:92.70;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id COMPLETE-ARO-PWY; PWY-6163; ALL-CHORISMATE-PWY; PWY-6165; ARO-PWY;
metacyc_pathway_name superpathway of aromatic amino acid biosynthesis;; chorismate biosynthesis from 3-dehydroquinate;; superpathway of chorismate metabolism;; chorismate biosynthesis II (archaea);; chorismate biosynthesis I;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis;; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;;
pfam_acc PF01264;
pfam_desc Chorismate synthase;
pfam_id Chorismate_synt;
pfam_target db:Pfam-A.hmm|PF01264.21 evalue:2.2e-132 score:440.0 best_domain_score:439.8 name:Chorismate_synt;
sprot_desc Chorismate synthase;
sprot_id sp|Q5LX60|AROC_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LX60|AROC_RUEPO 1 359 evalue:1.9e-163 qcov:97.30 identity:77.70;
tigrfam_acc TIGR00033;
tigrfam_desc chorismate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name aroC;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00033 evalue:1.3e-131 score:437.9 best_domain_score:437.7 name:TIGR00033;
12671 11220 CDS
ID metaerg.pl|01623
allgo_ids GO:0005525; GO:0042254;
allko_ids K03977;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794944.1 1 483 evalue:1.9e-260 qcov:100.00 identity:93.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF13479; PF04548; PF00025; PF00350; PF02421; PF00009; PF14714; PF03308; PF01926; PF00071; PF08477; PF03193; PF05621;
pfam_desc AAA domain; AIG1 family; ADP-ribosylation factor family; Dynamin family; Ferrous iron transport protein B; Elongation factor Tu GTP binding domain; KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; Methylmalonyl Co-A mutase-associated GTPase MeaB; 50S ribosome-binding GTPase; Ras family; Ras of Complex, Roc, domain of DAPkinase; RsgA GTPase; Bacterial TniB protein;
pfam_id AAA_24; AIG1; Arf; Dynamin_N; FeoB_N; GTP_EFTU; KH_dom-like; MeaB; MMR_HSR1; Ras; Roc; RsgA_GTPase; TniB;
pfam_target db:Pfam-A.hmm|PF13479.6 evalue:1.8e-06 score:27.1 best_domain_score:14.7 name:AAA_24; db:Pfam-A.hmm|PF04548.16 evalue:2.2e-12 score:46.0 best_domain_score:22.9 name:AIG1; db:Pfam-A.hmm|PF00025.21 evalue:6.4e-08 score:31.5 best_domain_score:18.1 name:Arf; db:Pfam-A.hmm|PF00350.23 evalue:3.3e-15 score:55.8 best_domain_score:27.1 name:Dynamin_N; db:Pfam-A.hmm|PF02421.18 evalue:3.3e-25 score:87.7 best_domain_score:43.5 name:FeoB_N; db:Pfam-A.hmm|PF00009.27 evalue:3e-17 score:62.0 best_domain_score:29.0 name:GTP_EFTU; db:Pfam-A.hmm|PF14714.6 evalue:5.6e-32 score:109.1 best_domain_score:108.2 name:KH_dom-like; db:Pfam-A.hmm|PF03308.16 evalue:4.6e-08 score:31.6 best_domain_score:12.5 name:MeaB; db:Pfam-A.hmm|PF01926.23 evalue:9e-48 score:160.3 best_domain_score:88.2 name:MMR_HSR1; db:Pfam-A.hmm|PF00071.22 evalue:2.2e-08 score:33.1 best_domain_score:17.4 name:Ras; db:Pfam-A.hmm|PF08477.13 evalue:9.4e-07 score:28.3 best_domain_score:15.6 name:Roc; db:Pfam-A.hmm|PF03193.16 evalue:6.3e-10 score:38.4 best_domain_score:12.0 name:RsgA_GTPase; db:Pfam-A.hmm|PF05621.11 evalue:2.4e-05 score:23.1 best_domain_score:14.4 name:TniB;
sprot_desc GTPase Der;
sprot_id sp|A4WUI6|DER_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WUI6|DER_RHOS5 1 478 evalue:1.6e-229 qcov:99.00 identity:81.40;
tigrfam_acc TIGR00231; TIGR00436; TIGR03594;
tigrfam_desc small GTP-binding protein domain; GTP-binding protein Era; ribosome-associated GTPase EngA;
tigrfam_mainrole Unknown function; Protein synthesis; Protein synthesis;
tigrfam_name small_GTP; era; GTPase_EngA;
tigrfam_sub1role General; Other; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:8.7e-49 score:164.6 best_domain_score:89.4 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00436 evalue:6.4e-35 score:120.0 best_domain_score:61.4 name:TIGR00436; db:TIGRFAMs.hmm|TIGR03594 evalue:2.9e-160 score:533.1 best_domain_score:533.0 name:TIGR03594;
14060 12744 CDS
ID metaerg.pl|01624
allko_ids K08852; K14028; K08860; K11715;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795106.1 1 438 evalue:2.9e-204 qcov:100.00 identity:81.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01011; PF13360; PF13570;
pfam_desc PQQ enzyme repeat; PQQ-like domain; PQQ-like domain;
pfam_id PQQ; PQQ_2; PQQ_3;
pfam_target db:Pfam-A.hmm|PF01011.21 evalue:4.4e-20 score:69.8 best_domain_score:19.2 name:PQQ; db:Pfam-A.hmm|PF13360.6 evalue:1.8e-57 score:193.9 best_domain_score:170.5 name:PQQ_2; db:Pfam-A.hmm|PF13570.6 evalue:2e-32 score:110.1 best_domain_score:30.9 name:PQQ_3;
sp YES;
12744 12800 lipoprotein_signal_peptide
ID metaerg.pl|01625
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
14752 14108 CDS
ID metaerg.pl|01626
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468099.1 1 213 evalue:1.2e-81 qcov:99.50 identity:77.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
tm_num 1;
14752 14108 transmembrane_helix
ID metaerg.pl|01627
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i14168-14236o;
14973 16070 CDS
ID metaerg.pl|01628
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794942.1 1 365 evalue:1.5e-153 qcov:100.00 identity:78.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF13437; PF16576;
pfam_desc HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF13437.6 evalue:3.7e-16 score:59.0 best_domain_score:47.1 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:1.2e-20 score:72.9 best_domain_score:56.3 name:HlyD_D23;
sp YES;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:2.3e-42 score:144.2 best_domain_score:144.0 name:TIGR01730;
14973 15062 signal_peptide
ID metaerg.pl|01629
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
16067 19774 CDS
ID metaerg.pl|01630
allgo_ids GO:0016020; GO:0022857; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794941.1 1 1235 evalue:0.0e+00 qcov:100.00 identity:85.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00873;
pfam_desc AcrB/AcrD/AcrF family;
pfam_id ACR_tran;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:7.7e-145 score:483.2 best_domain_score:284.4 name:ACR_tran;
sp YES;
tm_num 14;
16067 16153 signal_peptide
ID metaerg.pl|01631
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
16067 19774 transmembrane_helix
ID metaerg.pl|01632
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i16100-16168o17063-17131i17150-17218o17228-17296i17357-17425o17468-17536i17597-17665o17708-17776i17846-17914o19043-19096i19115-19183o19196-19264i19352-19420o19478-19546i;
20725 20099 CDS
ID metaerg.pl|01633
allgo_ids GO:0005737; GO:0005525; GO:0003924; GO:0016151; GO:0006807;
allko_ids K03189;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_A;s__Rhodobacter_A johrii;
genomedb_acc GCF_001720585.1;
genomedb_target db:genomedb|GCF_001720585.1|WP_069333684.1 1 203 evalue:9.1e-95 qcov:97.60 identity:88.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF02492; PF03308;
pfam_desc CobW/HypB/UreG, nucleotide-binding domain; Methylmalonyl Co-A mutase-associated GTPase MeaB;
pfam_id cobW; MeaB;
pfam_target db:Pfam-A.hmm|PF02492.19 evalue:2.9e-34 score:117.4 best_domain_score:117.2 name:cobW; db:Pfam-A.hmm|PF03308.16 evalue:1.9e-06 score:26.3 best_domain_score:25.0 name:MeaB;
sprot_desc Urease accessory protein UreG;
sprot_id sp|B9KK42|UREG_RHOSK;
sprot_target db:uniprot_sprot|sp|B9KK42|UREG_RHOSK 1 203 evalue:5.2e-97 qcov:97.60 identity:88.70;
tigrfam_acc TIGR00101;
tigrfam_desc urease accessory protein UreG;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name ureG;
tigrfam_sub1role Nitrogen metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR00101 evalue:2e-88 score:294.5 best_domain_score:294.3 name:TIGR00101;
21104 20718 CDS
ID metaerg.pl|01634
allgo_ids GO:0051920; GO:0055114; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794939.1 1 127 evalue:1.3e-56 qcov:99.20 identity:87.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF02627;
pfam_desc Carboxymuconolactone decarboxylase family;
pfam_id CMD;
pfam_target db:Pfam-A.hmm|PF02627.20 evalue:8.4e-13 score:47.4 best_domain_score:47.1 name:CMD;
sprot_desc Uncharacterized 13.8 kDa protein in nqo9-nqo10 intergenic region;
sprot_id sp|P29911|YNQ5_PARDE;
sprot_target db:uniprot_sprot|sp|P29911|YNQ5_PARDE 5 124 evalue:6.8e-31 qcov:93.80 identity:58.70;
21739 21101 CDS
ID metaerg.pl|01635
allgo_ids GO:0006807; GO:0016151; GO:0005737;
allko_ids K03188;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657365.1 2 212 evalue:1.3e-83 qcov:99.50 identity:76.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01730;
pfam_desc UreF;
pfam_id UreF;
pfam_target db:Pfam-A.hmm|PF01730.16 evalue:4e-21 score:75.2 best_domain_score:74.7 name:UreF;
sprot_desc Urease accessory protein UreF;
sprot_id sp|A4WR78|UREF_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WR78|UREF_RHOS5 2 212 evalue:8.3e-50 qcov:99.50 identity:51.20;
22243 21743 CDS
ID metaerg.pl|01636
allgo_ids GO:0016151; GO:0019627; GO:0065003; GO:0005737; GO:0051082; GO:0018307; GO:0006457;
allko_ids K03187;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470254.1 1 166 evalue:3.4e-76 qcov:100.00 identity:84.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF05194; PF02814;
pfam_desc UreE urease accessory protein, C-terminal domain; UreE urease accessory protein, N-terminal domain;
pfam_id UreE_C; UreE_N;
pfam_target db:Pfam-A.hmm|PF05194.12 evalue:4.5e-26 score:90.4 best_domain_score:89.7 name:UreE_C; db:Pfam-A.hmm|PF02814.15 evalue:4.3e-08 score:31.9 best_domain_score:30.9 name:UreE_N;
sprot_desc Urease accessory protein UreE;
sprot_id sp|Q3J156|UREE_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J156|UREE_RHOS4 1 147 evalue:9.0e-44 qcov:88.60 identity:59.70;
22473 22240 CDS
ID metaerg.pl|01637
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794936.1 1 77 evalue:1.5e-23 qcov:100.00 identity:72.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
sp YES;
22240 22359 signal_peptide
ID metaerg.pl|01638
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
24319 22598 CDS
ID metaerg.pl|01639
allec_ids 3.5.1.5;
allgo_ids GO:0016787; GO:0005737; GO:0016151; GO:0009039; GO:0043419;
allko_ids K01427; K14048; K01429; K01430; K01428;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794935.1 1 573 evalue:0.0e+00 qcov:100.00 identity:94.80;
kegg_pathway_id 00220; 00791; 00230;
kegg_pathway_name Urea cycle and metabolism of amino groups; Atrazine degradation; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metabolic_acc TIGR01792;
metabolic_process compound:Urea;process:Urease;gene:ureC;;
metabolic_target db:metabolic.hmm|TIGR01792 evalue:5.3e-292 score:968.8 best_domain_score:968.6 name:TIGR01792;
metacyc_pathway_id URDEGR-PWY; PWY-5704;
metacyc_pathway_name superpathway of allantoin degradation in plants;; urea degradation II;;
metacyc_pathway_type Allantoin-degradation; Super-Pathways;; Urea-Degradation;;
pfam_acc PF01979; PF07969; PF00449;
pfam_desc Amidohydrolase family; Amidohydrolase family; Urease alpha-subunit, N-terminal domain;
pfam_id Amidohydro_1; Amidohydro_3; Urease_alpha;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:2.8e-75 score:253.0 best_domain_score:252.6 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:5.1e-11 score:41.9 best_domain_score:31.3 name:Amidohydro_3; db:Pfam-A.hmm|PF00449.20 evalue:2.9e-54 score:181.8 best_domain_score:180.5 name:Urease_alpha;
sprot_desc Urease subunit alpha;
sprot_id sp|Q5LSQ2|URE1_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LSQ2|URE1_RUEPO 1 573 evalue:7.4e-271 qcov:100.00 identity:79.20;
tigrfam_acc TIGR01792;
tigrfam_desc urease, alpha subunit;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name urease_alph;
tigrfam_sub1role Nitrogen metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR01792 evalue:5.3e-292 score:968.8 best_domain_score:968.6 name:TIGR01792;
24632 24321 CDS
ID metaerg.pl|01640
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter sp003509785;
genomedb_acc GCA_003509785.1;
genomedb_target db:genomedb|GCA_003509785.1|HBU13806.1 5 98 evalue:3.5e-15 qcov:91.30 identity:53.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
sp YES;
24321 24380 signal_peptide
ID metaerg.pl|01641
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
24950 24645 CDS
ID metaerg.pl|01642
allec_ids 3.5.1.5;
allgo_ids GO:0005737; GO:0009039; GO:0043419;
allko_ids K14048; K01429; K01430;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795105.1 1 101 evalue:3.9e-43 qcov:100.00 identity:85.10;
kegg_pathway_id 00230; 00220; 00791;
kegg_pathway_name Purine metabolism; Urea cycle and metabolism of amino groups; Atrazine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metabolic_acc TIGR00192;
metabolic_process compound:Urea;process:Urease;gene:ureB;;
metabolic_target db:metabolic.hmm|TIGR00192 evalue:6.2e-42 score:141.1 best_domain_score:141.0 name:TIGR00192;
metacyc_pathway_id URDEGR-PWY; PWY-5704;
metacyc_pathway_name superpathway of allantoin degradation in plants;; urea degradation II;;
metacyc_pathway_type Allantoin-degradation; Super-Pathways;; Urea-Degradation;;
pfam_acc PF00699;
pfam_desc Urease beta subunit;
pfam_id Urease_beta;
pfam_target db:Pfam-A.hmm|PF00699.20 evalue:3.1e-44 score:148.2 best_domain_score:148.1 name:Urease_beta;
sprot_desc Urease subunit beta;
sprot_id sp|A6UC38|URE2_SINMW;
sprot_target db:uniprot_sprot|sp|A6UC38|URE2_SINMW 1 101 evalue:2.0e-38 qcov:100.00 identity:74.30;
tigrfam_acc TIGR00192;
tigrfam_desc urease, beta subunit;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name urease_beta;
tigrfam_sub1role Nitrogen metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR00192 evalue:6.2e-42 score:141.1 best_domain_score:141.0 name:TIGR00192;
25515 24961 CDS
ID metaerg.pl|01643
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter aquatilis;
genomedb_acc GCF_900110025.1;
genomedb_target db:genomedb|GCF_900110025.1|WP_091295729.1 1 183 evalue:3.8e-36 qcov:99.50 identity:53.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF04955;
pfam_desc HupE / UreJ protein;
pfam_id HupE_UreJ;
pfam_target db:Pfam-A.hmm|PF04955.12 evalue:2.6e-46 score:156.6 best_domain_score:156.3 name:HupE_UreJ;
sp YES;
tm_num 6;
24961 25011 signal_peptide
ID metaerg.pl|01644
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
25515 24961 transmembrane_helix
ID metaerg.pl|01645
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology o25066-25134i25138-25197o25210-25269i25282-25335o25363-25431i25450-25509o;
25830 25528 CDS
ID metaerg.pl|01646
allec_ids 3.5.1.5;
allgo_ids GO:0016151; GO:0043419; GO:0005737; GO:0009039;
allko_ids K01430; K14048; K01429;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter_A;s__Pseudorhodobacter_A sp001828855;
genomedb_acc GCA_001828855.1;
genomedb_target db:genomedb|GCA_001828855.1|OHC57520.1 1 100 evalue:1.1e-45 qcov:100.00 identity:94.00;
kegg_pathway_id 00220; 00791; 00230;
kegg_pathway_name Urea cycle and metabolism of amino groups; Atrazine degradation; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metabolic_acc TIGR00193;
metabolic_process compound:Urea;process:Urease;gene:ureA;;
metabolic_target db:metabolic.hmm|TIGR00193 evalue:2.4e-45 score:152.0 best_domain_score:151.9 name:TIGR00193;
metacyc_pathway_id PWY-5704; URDEGR-PWY;
metacyc_pathway_name urea degradation II;; superpathway of allantoin degradation in plants;;
metacyc_pathway_type Urea-Degradation;; Allantoin-degradation; Super-Pathways;;
pfam_acc PF00547;
pfam_desc Urease, gamma subunit;
pfam_id Urease_gamma;
pfam_target db:Pfam-A.hmm|PF00547.18 evalue:2.6e-46 score:155.2 best_domain_score:155.1 name:Urease_gamma;
sprot_desc Urease subunit gamma;
sprot_id sp|A8LRS4|URE3_DINSH;
sprot_target db:uniprot_sprot|sp|A8LRS4|URE3_DINSH 1 100 evalue:4.5e-46 qcov:100.00 identity:91.00;
tigrfam_acc TIGR00193;
tigrfam_desc urease, gamma subunit;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name urease_gam;
tigrfam_sub1role Nitrogen metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR00193 evalue:2.4e-45 score:152.0 best_domain_score:151.9 name:TIGR00193;
26646 25840 CDS
ID metaerg.pl|01647
allgo_ids GO:0006807; GO:0016151; GO:0005737;
allko_ids K03190;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794933.1 1 267 evalue:3.0e-106 qcov:99.60 identity:78.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01774;
pfam_desc UreD urease accessory protein;
pfam_id UreD;
pfam_target db:Pfam-A.hmm|PF01774.17 evalue:6.6e-39 score:133.3 best_domain_score:133.0 name:UreD;
sprot_desc Urease accessory protein UreD;
sprot_id sp|A4WR71|URED_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WR71|URED_RHOS5 11 268 evalue:1.3e-68 qcov:96.30 identity:58.00;
26897 27706 CDS
ID metaerg.pl|01648
allec_ids 3.1.11.2;
allko_ids K10772; K01741;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470265.1 1 269 evalue:8.6e-138 qcov:100.00 identity:88.80;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF03372;
pfam_desc Endonuclease/Exonuclease/phosphatase family;
pfam_id Exo_endo_phos;
pfam_target db:Pfam-A.hmm|PF03372.23 evalue:3e-20 score:72.0 best_domain_score:71.8 name:Exo_endo_phos;
tigrfam_acc TIGR00195; TIGR00633;
tigrfam_desc exodeoxyribonuclease III; exodeoxyribonuclease III (xth);
tigrfam_mainrole DNA metabolism; DNA metabolism;
tigrfam_name exoDNase_III; xth;
tigrfam_sub1role DNA replication, recombination, and repair; DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00195 evalue:5.9e-68 score:228.4 best_domain_score:228.1 name:TIGR00195; db:TIGRFAMs.hmm|TIGR00633 evalue:1.7e-62 score:210.4 best_domain_score:210.1 name:TIGR00633;
27803 28150 CDS
ID metaerg.pl|01649
allgo_ids GO:0035438;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794929.1 6 108 evalue:7.9e-24 qcov:89.60 identity:51.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF07238;
pfam_desc PilZ domain;
pfam_id PilZ;
pfam_target db:Pfam-A.hmm|PF07238.14 evalue:2.9e-07 score:30.0 best_domain_score:29.6 name:PilZ;
28459 29940 CDS
ID metaerg.pl|01650
allec_ids 3.4.16.4;
allgo_ids GO:0004185; GO:0006508;
allko_ids K07259;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386505.1 3 492 evalue:1.8e-210 qcov:99.40 identity:75.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-5265; PEPTIDOGLYCANSYN-PWY; PWY-6471;
metacyc_pathway_name peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF02113;
pfam_desc D-Ala-D-Ala carboxypeptidase 3 (S13) family;
pfam_id Peptidase_S13;
pfam_target db:Pfam-A.hmm|PF02113.15 evalue:1.3e-46 score:158.5 best_domain_score:156.5 name:Peptidase_S13;
sp YES;
tigrfam_acc TIGR00666;
tigrfam_desc D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;
tigrfam_mainrole Cell envelope;
tigrfam_name PBP4;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00666 evalue:5.6e-39 score:133.1 best_domain_score:132.2 name:TIGR00666;
28459 28542 signal_peptide
ID metaerg.pl|01651
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
31037 30159 CDS
ID metaerg.pl|01652
allec_ids 2.3.1.12;
allgo_ids GO:0016746; GO:0005737; GO:0045254; GO:0016407; GO:0004742; GO:0031405; GO:0006086; GO:0006096;
allko_ids K09699; K00658; K00162; K00163; K00382; K00627;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCO07;s__HLUCCO07 sp001314705;
genomedb_acc GCA_001314705.1;
genomedb_target db:genomedb|GCA_001314705.1|KPP86787.1 1 292 evalue:4.9e-131 qcov:100.00 identity:80.80;
kegg_pathway_id 00290; 00280; 00310; 00010; 00020; 00260; 00252; 00620; 00650;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Lysine degradation; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Butanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PYRUVDEHYD-PWY; PWY-5173; PWY-5464;
metacyc_pathway_name pyruvate decarboxylation to acetyl CoA;; superpathway of acetyl-CoA biosynthesis;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Acetyl-CoA-Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00198;
pfam_desc 2-oxoacid dehydrogenases acyltransferase (catalytic domain);
pfam_id 2-oxoacid_dh;
pfam_target db:Pfam-A.hmm|PF00198.23 evalue:4.6e-72 score:241.5 best_domain_score:241.3 name:2-oxoacid_dh;
sprot_desc Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex;
sprot_id sp|Q59638|ODP2_PSEAE;
sprot_target db:uniprot_sprot|sp|Q59638|ODP2_PSEAE 61 292 evalue:1.3e-56 qcov:79.50 identity:49.60;
32475 31051 CDS
ID metaerg.pl|01653
allec_ids 1.2.1.16;
allgo_ids GO:0016491; GO:0055114; GO:0009013; GO:0019608;
allko_ids K13821; K00139; K00318; K00135; K00131; K00128; K00294;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469279.1 1 474 evalue:1.1e-249 qcov:100.00 identity:91.80;
kegg_pathway_id 00251; 00631; 00410; 00340; 00071; 00280; 00310; 00010; 00561; 00220; 00903; 00330; 00620; 00650; 00640; 00350; 00641; 00380; 00120;
kegg_pathway_name Glutamate metabolism; 1,2-Dichloroethane degradation; beta-Alanine metabolism; Histidine metabolism; Fatty acid metabolism; Valine, leucine and isoleucine degradation; Lysine degradation; Glycolysis / Gluconeogenesis; Glycerolipid metabolism; Urea cycle and metabolism of amino groups; Limonene and pinene degradation; Arginine and proline metabolism; Pyruvate metabolism; Butanoate metabolism; Propanoate metabolism; Tyrosine metabolism; 3-Chloroacrylic acid degradation; Tryptophan metabolism; Bile acid biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6536;
metacyc_pathway_name 4-aminobutanoate degradation III;;
metacyc_pathway_type 4-Aminobutyraye-Degradation;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:3.3e-158 score:526.2 best_domain_score:526.0 name:Aldedh;
sprot_desc Succinate-semialdehyde dehydrogenase;
sprot_id sp|Q8GAI8|SSDH_PAENI;
sprot_target db:uniprot_sprot|sp|Q8GAI8|SSDH_PAENI 29 470 evalue:5.1e-132 qcov:93.20 identity:53.80;
33804 32491 CDS
ID metaerg.pl|01654
allko_ids K00382; K01571; K00162; K00658; K09699; K00164; K11381; K01958;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCO07;s__HLUCCO07 sp003258925;
genomedb_acc GCF_003258925.1;
genomedb_target db:genomedb|GCF_003258925.1|WP_111365464.1 11 437 evalue:6.7e-140 qcov:97.70 identity:65.20;
kegg_pathway_id 00290; 00280; 00010; 00310; 00020; 00380; 00260; 00252; 00620; 00330; 00650;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Lysine degradation; Citrate cycle (TCA cycle); Tryptophan metabolism; Glycine, serine and threonine metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Arginine and proline metabolism; Butanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00364; PF13533; PF01597; PF13437;
pfam_desc Biotin-requiring enzyme; Biotin-lipoyl like; Glycine cleavage H-protein; HlyD family secretion protein;
pfam_id Biotin_lipoyl; Biotin_lipoyl_2; GCV_H; HlyD_3;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:3.2e-38 score:128.7 best_domain_score:70.5 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:1.4e-08 score:33.7 best_domain_score:14.0 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF01597.19 evalue:6.8e-06 score:25.2 best_domain_score:13.6 name:GCV_H; db:Pfam-A.hmm|PF13437.6 evalue:2.3e-05 score:24.3 best_domain_score:9.7 name:HlyD_3;
34789 33794 CDS
ID metaerg.pl|01655
allec_ids 1.1.1.-;
allgo_ids GO:0016491; GO:0045150;
allko_ids K11381; K00161; K00167; K00615; K00162; K21417;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092891568.1 1 331 evalue:1.6e-173 qcov:100.00 identity:95.50;
kegg_pathway_id 00020; 00710; 00010; 00030; 00280; 00290; 00650; 00620; 01051; 00252;
kegg_pathway_name Citrate cycle (TCA cycle); Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Pentose phosphate pathway; Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Butanoate metabolism; Pyruvate metabolism; Biosynthesis of ansamycins; Alanine and aspartate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6577; PWY-5048; ECASYN-PWY; TOLSULFDEG-PWY; PWY-481; PWY-5789; PWY-5327; PWY-882; PWY-1186; SUCROSEUTIL2-PWY; PWY-6419; PWY-6516; PWY1A0-6325; PWY-321; 4TOLCARBDEG-PWY; CENTBENZCOA-PWY; LYSDEGII-PWY; PWY-6575; PWY-5197; BENZCOA-PWY; PWY-5184; PWY-6501; PWY-5392; PWY-5516; P302-PWY; PWY-5195; PWY-5972; PWY-5466;
metacyc_pathway_name farnesylcysteine salvage pathway;; rosmarinic acid biosynthesis I;; enterobacterial common antigen biosynthesis;; 4-toluenesulfonate degradation I;; ethylbenzene degradation (anaerobic);; 3-hydroxypropanoate/4-hydroxybutanate cycle;; superpathway of L-lysine degradation;; L-ascorbate biosynthesis I (L-galactose pathway);; L-homomethionine biosynthesis;; sucrose degradation VII (sucrose 3-dehydrogenase);; shikimate degradation II;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; actinorhodin biosynthesis;; cutin biosynthesis;; 4-toluenecarboxylate degradation;; benzoyl-CoA degradation II (anaerobic);; L-lysine degradation III;; juvenile hormone III biosynthesis I;; lactate biosynthesis (archaea);; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; D-glucuronate degradation II;; reductive TCA cycle II;; D-xylose degradation II;; L-sorbose degradation;; artemisinin and arteannuin B biosynthesis;; stearate biosynthesis I (animals and fungi);; matairesinol biosynthesis;;
metacyc_pathway_type All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Rosmarinate-Biosynthesis;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; 4-Toluenesulfonate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; Autotrophic-CO2-Fixation;; LYSINE-DEG; Super-Pathways;; Ascorbate-Biosynthesis;; Other-Amino-Acid-Biosynthesis;; SUCROSE-DEG;; Shikimate-Degradation;; Sugar-Derivatives; Super-Pathways;; Antibiotic-Biosynthesis;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Benzoyl-CoA-Degradation;; LYSINE-DEG;; HORMONE-SYN; JH-III-Biosynthesis;; Energy-Metabolism;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; D-Glucuronate-Degradation;; Reductive-TCA-Cycles;; Xylose-Degradation;; Sugars-And-Polysaccharides-Degradation;; SESQUITERPENE-LACTONE;; Stearate-Biosynthesis;; LIGNAN-SYN;;
pfam_acc PF02780; PF02779;
pfam_desc Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain;
pfam_id Transketolase_C; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF02780.20 evalue:1.2e-41 score:140.7 best_domain_score:139.7 name:Transketolase_C; db:Pfam-A.hmm|PF02779.24 evalue:1.1e-49 score:167.7 best_domain_score:167.3 name:Transket_pyr;
sprot_desc Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta;
sprot_id sp|O34591|ACOB_BACSU;
sprot_target db:uniprot_sprot|sp|O34591|ACOB_BACSU 2 317 evalue:2.0e-82 qcov:95.50 identity:50.60;
35779 34802 CDS
ID metaerg.pl|01656
allec_ids 1.1.1.-;
allgo_ids GO:0008661; GO:0016114; GO:0016624; GO:0045150;
allko_ids K00162; K00166; K11381; K00161; K21416;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469276.1 1 325 evalue:1.1e-171 qcov:100.00 identity:92.30;
kegg_pathway_id 00650; 00020; 00280; 00010; 00252; 00290; 00620;
kegg_pathway_name Butanoate metabolism; Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Alanine and aspartate metabolism; Valine, leucine and isoleucine biosynthesis; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-5972; PWY-5466; PWY-5195; PWY-6501; PWY-5184; PWY-5197; BENZCOA-PWY; P302-PWY; PWY-5392; PWY-5516; PWY-6575; PWY-321; CENTBENZCOA-PWY; 4TOLCARBDEG-PWY; LYSDEGII-PWY; PWY-6419; SUCROSEUTIL2-PWY; PWY-1186; PWY1A0-6325; PWY-6516; PWY-5789; PWY-481; PWY-882; PWY-5327; PWY-6577; TOLSULFDEG-PWY; ECASYN-PWY; PWY-5048;
metacyc_pathway_name stearate biosynthesis I (animals and fungi);; matairesinol biosynthesis;; artemisinin and arteannuin B biosynthesis;; D-glucuronate degradation II;; toluene degradation VI (anaerobic);; lactate biosynthesis (archaea);; anaerobic aromatic compound degradation (Thauera aromatica);; L-sorbose degradation;; reductive TCA cycle II;; D-xylose degradation II;; juvenile hormone III biosynthesis I;; cutin biosynthesis;; benzoyl-CoA degradation II (anaerobic);; 4-toluenecarboxylate degradation;; L-lysine degradation III;; shikimate degradation II;; sucrose degradation VII (sucrose 3-dehydrogenase);; L-homomethionine biosynthesis;; actinorhodin biosynthesis;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; ethylbenzene degradation (anaerobic);; L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of L-lysine degradation;; farnesylcysteine salvage pathway;; 4-toluenesulfonate degradation I;; enterobacterial common antigen biosynthesis;; rosmarinic acid biosynthesis I;;
metacyc_pathway_type Stearate-Biosynthesis;; LIGNAN-SYN;; SESQUITERPENE-LACTONE;; D-Glucuronate-Degradation;; Super-Pathways; TOLUENE-DEG;; Energy-Metabolism;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Sugars-And-Polysaccharides-Degradation;; Reductive-TCA-Cycles;; Xylose-Degradation;; HORMONE-SYN; JH-III-Biosynthesis;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; Benzoyl-CoA-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; LYSINE-DEG;; Shikimate-Degradation;; SUCROSE-DEG;; Other-Amino-Acid-Biosynthesis;; Antibiotic-Biosynthesis;; Sugar-Derivatives; Super-Pathways;; Autotrophic-CO2-Fixation;; AROMATIC-COMPOUNDS-DEGRADATION;; Ascorbate-Biosynthesis;; LYSINE-DEG; Super-Pathways;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; 4-Toluenesulfonate-Degradation;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Rosmarinate-Biosynthesis;;
pfam_acc PF13292; PF00676; PF02775; PF00456;
pfam_desc 1-deoxy-D-xylulose-5-phosphate synthase; Dehydrogenase E1 component; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Transketolase, thiamine diphosphate binding domain;
pfam_id DXP_synthase_N; E1_dh; TPP_enzyme_C; Transketolase_N;
pfam_target db:Pfam-A.hmm|PF13292.6 evalue:2e-05 score:23.2 best_domain_score:22.5 name:DXP_synthase_N; db:Pfam-A.hmm|PF00676.20 evalue:1.2e-79 score:266.7 best_domain_score:266.5 name:E1_dh; db:Pfam-A.hmm|PF02775.21 evalue:1.9e-07 score:30.2 best_domain_score:27.7 name:TPP_enzyme_C; db:Pfam-A.hmm|PF00456.21 evalue:0.00012 score:20.4 best_domain_score:19.8 name:Transketolase_N;
sprot_desc Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha;
sprot_id sp|O31404|ACOA_BACSU;
sprot_target db:uniprot_sprot|sp|O31404|ACOA_BACSU 9 325 evalue:1.3e-75 qcov:97.50 identity:46.90;
37159 35861 CDS
ID metaerg.pl|01657
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479817.1 1 432 evalue:7.8e-250 qcov:100.00 identity:96.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00557;
pfam_desc Metallopeptidase family M24;
pfam_id Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF00557.24 evalue:1.3e-32 score:112.4 best_domain_score:112.0 name:Peptidase_M24;
38045 37236 CDS
ID metaerg.pl|01658
allec_ids 1.1.1.304;
allgo_ids GO:0052588; GO:0045150;
allko_ids K03366;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_074444007.1 1 269 evalue:5.2e-135 qcov:100.00 identity:91.80;
kegg_pathway_id 00650;
kegg_pathway_name Butanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6389; PWY-6396;
metacyc_pathway_name pyruvate fermentation to (S)-acetoin;; superpathway of 2,3-butanediol biosynthesis;;
metacyc_pathway_type Acetoin-Biosynthesis;; Butanediol-Biosynthesis; Super-Pathways;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:1e-41 score:141.8 best_domain_score:141.5 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.8e-46 score:157.2 best_domain_score:156.7 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:7.9e-07 score:28.4 best_domain_score:27.7 name:KR;
sprot_desc Diacetyl reductase [(S)-acetoin forming];
sprot_id sp|Q8CQD2|BUTA_STAES;
sprot_target db:uniprot_sprot|sp|Q8CQD2|BUTA_STAES 9 267 evalue:1.6e-34 qcov:96.30 identity:36.70;
39873 38068 CDS
ID metaerg.pl|01659
allko_ids K02027;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469273.1 16 601 evalue:2.7e-285 qcov:97.50 identity:82.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01547; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:1.2e-23 score:83.8 best_domain_score:83.1 name:SBP_bac_1; db:Pfam-A.hmm|PF13416.6 evalue:1.9e-19 score:69.8 best_domain_score:68.9 name:SBP_bac_8;
40086 41027 CDS
ID metaerg.pl|01660
allgo_ids GO:0005886; GO:0030246; GO:0008643; GO:0071322;
allko_ids K10439;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_100319231.1 5 313 evalue:1.5e-162 qcov:98.70 identity:93.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00532; PF13407;
pfam_desc Periplasmic binding proteins and sugar binding domain of LacI family; Periplasmic binding protein domain;
pfam_id Peripla_BP_1; Peripla_BP_4;
pfam_target db:Pfam-A.hmm|PF00532.21 evalue:2.5e-14 score:52.6 best_domain_score:52.1 name:Peripla_BP_1; db:Pfam-A.hmm|PF13407.6 evalue:4e-55 score:186.4 best_domain_score:186.2 name:Peripla_BP_4;
sp YES;
sprot_desc Xylitol-binding protein;
sprot_id sp|A0QYB3|XYPA_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QYB3|XYPA_MYCS2 19 306 evalue:7.2e-34 qcov:92.00 identity:34.60;
40086 40151 signal_peptide
ID metaerg.pl|01661
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
41144 42112 CDS
ID metaerg.pl|01662
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0008643;
allko_ids K10441; K02057; K02056; K10440; K10562; K10551;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479815.1 1 322 evalue:1.2e-154 qcov:100.00 identity:91.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:2.4e-39 score:134.3 best_domain_score:134.3 name:BPD_transp_2;
sprot_desc Ribose import permease protein RbsC;
sprot_id sp|P36948|RBSC_BACSU;
sprot_target db:uniprot_sprot|sp|P36948|RBSC_BACSU 13 309 evalue:1.7e-38 qcov:92.20 identity:36.50;
tm_num 9;
41144 42112 transmembrane_helix
ID metaerg.pl|01663
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology o41171-41230i41267-41335o41420-41488i41492-41560o41618-41686i41777-41845o41888-41947i41951-42004o42014-42067i;
42120 43109 CDS
ID metaerg.pl|01664
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0008643;
allko_ids K10441; K02056; K02057; K10440; K01995; K10551; K01998; K10562;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481912.1 14 329 evalue:1.6e-157 qcov:96.00 identity:91.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:3.4e-48 score:163.4 best_domain_score:163.0 name:BPD_transp_2;
sprot_desc Ribose import permease protein RbsC;
sprot_id sp|P36948|RBSC_BACSU;
sprot_target db:uniprot_sprot|sp|P36948|RBSC_BACSU 17 318 evalue:2.1e-39 qcov:91.80 identity:36.50;
tm_num 8;
42120 43109 transmembrane_helix
ID metaerg.pl|01665
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i42153-42212o42255-42323i42336-42404o42417-42485i42504-42563o42621-42689i42777-42845o42996-43064i;
43106 44620 CDS
ID metaerg.pl|01666
allec_ids 7.5.2.7;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015407; GO:0015591;
allko_ids K02000; K10539; K02023; K10542; K01990; K02013; K05816; K10545; K01998; K10111; K10562; K10551; K02049; K01995; K02065; K02045; K11072; K10441; K06861; K02071; K01996; K10820; K02032; K02017; K02052; K02006; K02010; K02056; K10558; K05847; K01997; K02003;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479814.1 1 500 evalue:6.1e-238 qcov:99.20 identity:85.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:6.5e-07 score:28.7 best_domain_score:15.4 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.8e-51 score:172.9 best_domain_score:105.3 name:ABC_tran;
sprot_desc Ribose import ATP-binding protein RbsA;
sprot_id sp|Q28P50|RBSA_JANSC;
sprot_target db:uniprot_sprot|sp|Q28P50|RBSA_JANSC 4 498 evalue:2.1e-128 qcov:98.20 identity:47.10;
44790 44581 CDS
ID metaerg.pl|01667
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
45405 44950 CDS
ID metaerg.pl|01668
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Actibacterium;s__Actibacterium ureilyticum;
genomedb_acc GCF_002285435.1;
genomedb_target db:genomedb|GCF_002285435.1|WP_095590125.1 1 146 evalue:1.3e-50 qcov:96.70 identity:71.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
46651 45395 CDS
ID metaerg.pl|01669
allec_ids 3.5.3.11;
allgo_ids GO:0046872; GO:0008783; GO:0009446;
allko_ids K01480;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudooceanicola;s__Pseudooceanicola atlanticus;
genomedb_acc GCF_000768315.1;
genomedb_target db:genomedb|GCF_000768315.1|WP_052418508.1 9 417 evalue:7.1e-224 qcov:97.80 identity:89.70;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6305; PWY0-823; POLYAMSYN-PWY; ARG+POLYAMINE-SYN; PWY-40;
metacyc_pathway_name putrescine biosynthesis IV;; L-arginine degradation III (arginine decarboxylase/agmatinase pathway);; superpathway of polyamine biosynthesis I;; superpathway of arginine and polyamine biosynthesis;; putrescine biosynthesis I;;
metacyc_pathway_type Putrescine-Biosynthesis;; ARGININE-DEG;; Polyamine-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; Putrescine-Biosynthesis;;
pfam_acc PF00491;
pfam_desc Arginase family;
pfam_id Arginase;
pfam_target db:Pfam-A.hmm|PF00491.21 evalue:9.8e-76 score:254.1 best_domain_score:253.5 name:Arginase;
sprot_desc Probable agmatinase 2;
sprot_id sp|P73270|SPEB2_SYNY3;
sprot_target db:uniprot_sprot|sp|P73270|SPEB2_SYNY3 40 391 evalue:1.3e-139 qcov:84.20 identity:65.30;
47399 46626 CDS
ID metaerg.pl|01670
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0008509; GO:0016887;
allko_ids K11072; K02045; K02071; K06861; K01996; K11084; K02017; K01997; K02010; K05847; K02052; K02006; K02000; K01990; K02023; K05816; K11076; K02065; K01995; K02049; K01998; K10112; K10111; K15555;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicimonas;s__Tropicimonas isoalkanivorans;
genomedb_acc GCF_900112335.1;
genomedb_target db:genomedb|GCF_900112335.1|WP_093360532.1 1 255 evalue:3.2e-110 qcov:99.20 identity:76.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6188; PWY-6166; PWY-6135; PWY-6171; PWY-6113; PWYG-321;
metacyc_pathway_name ; ; ; ; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:9.5e-08 score:31.4 best_domain_score:17.6 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:9.8e-30 score:103.1 best_domain_score:102.7 name:ABC_tran;
sprot_desc Aliphatic sulfonates import ATP-binding protein SsuB 1;
sprot_id sp|Q1MFL8|SSUB1_RHIL3;
sprot_target db:uniprot_sprot|sp|Q1MFL8|SSUB1_RHIL3 4 216 evalue:1.1e-37 qcov:82.90 identity:39.00;
48208 47396 CDS
ID metaerg.pl|01671
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K02050;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Maritimibacter;s__Maritimibacter alkaliphilus;
genomedb_acc GCF_000152805.1;
genomedb_target db:genomedb|GCF_000152805.1|WP_008330580.1 1 270 evalue:6.6e-106 qcov:100.00 identity:77.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.3e-19 score:68.2 best_domain_score:68.2 name:BPD_transp_1;
sp YES;
sprot_desc Probable ABC transporter permease protein BRA1188/BS1330_II1179;
sprot_id sp|Q8FUN2|Y4188_BRUSU;
sprot_target db:uniprot_sprot|sp|Q8FUN2|Y4188_BRUSU 44 267 evalue:1.6e-21 qcov:83.00 identity:32.60;
tm_num 4;
47396 47482 signal_peptide
ID metaerg.pl|01672
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
48208 47396 transmembrane_helix
ID metaerg.pl|01673
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i47429-47488o47645-47713i47732-47800o48101-48169i;
49306 48236 CDS
ID metaerg.pl|01674
allko_ids K02051;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Mangrovicoccus;s__Mangrovicoccus ximenensis;
genomedb_acc GCF_003056725.1;
genomedb_target db:genomedb|GCF_003056725.1|WP_108257905.1 6 356 evalue:6.2e-152 qcov:98.60 identity:79.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF09084; PF13379; PF00497;
pfam_desc NMT1/THI5 like; NMT1-like family; Bacterial extracellular solute-binding proteins, family 3;
pfam_id NMT1; NMT1_2; SBP_bac_3;
pfam_target db:Pfam-A.hmm|PF09084.11 evalue:1.7e-05 score:24.1 best_domain_score:23.2 name:NMT1; db:Pfam-A.hmm|PF13379.6 evalue:8.1e-08 score:31.5 best_domain_score:28.7 name:NMT1_2; db:Pfam-A.hmm|PF00497.20 evalue:1.7e-06 score:26.9 best_domain_score:24.6 name:SBP_bac_3;
sp YES;
tigrfam_acc TIGR03427;
tigrfam_desc ABC transporter periplasmic binding protein, urea carboxylase region;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ABC_peri_uca;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR03427 evalue:3.9e-153 score:508.5 best_domain_score:508.3 name:TIGR03427;
48236 48316 signal_peptide
ID metaerg.pl|01675
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
49746 50294 CDS
ID metaerg.pl|01676
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__XJSP;s__XJSP sp002900965;
genomedb_acc GCF_002900965.1;
genomedb_target db:genomedb|GCF_002900965.1|WP_103332963.1 1 180 evalue:7.2e-64 qcov:98.90 identity:72.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF13305; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_33; TetR_N;
pfam_target db:Pfam-A.hmm|PF13305.6 evalue:3.9e-13 score:49.3 best_domain_score:48.4 name:TetR_C_33; db:Pfam-A.hmm|PF00440.23 evalue:4.1e-05 score:22.5 best_domain_score:21.5 name:TetR_N;
51930 50917 CDS
ID metaerg.pl|01677
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
sp YES;
50917 50973 signal_peptide
ID metaerg.pl|01678
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
52230 53516 CDS
ID metaerg.pl|01679
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799305.1 1 428 evalue:5.4e-195 qcov:100.00 identity:82.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF11902;
pfam_desc Protein of unknown function (DUF3422);
pfam_id DUF3422;
pfam_target db:Pfam-A.hmm|PF11902.8 evalue:3.5e-144 score:480.2 best_domain_score:480.1 name:DUF3422;
tm_num 2;
52230 53516 transmembrane_helix
ID metaerg.pl|01680
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i53340-53408o53421-53489i;
55326 53539 CDS
ID metaerg.pl|01681
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0016887; GO:0006935; GO:0031154; GO:0006972;
allko_ids K10111; K02023; K02006; K02052; K01996; K02071; K06861; K02045;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469011.1 1 595 evalue:1.1e-275 qcov:100.00 identity:87.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:1.6e-39 score:135.5 best_domain_score:135.1 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:1.7e-32 score:112.0 best_domain_score:110.8 name:ABC_tran;
sprot_desc ABC transporter B family member 1;
sprot_id sp|Q54BU4|ABCB1_DICDI;
sprot_target db:uniprot_sprot|sp|Q54BU4|ABCB1_DICDI 20 592 evalue:7.6e-93 qcov:96.30 identity:35.70;
tigrfam_acc TIGR02204;
tigrfam_desc ABC transporter, permease/ATP-binding protein;
tigrfam_name MsbA_rel;
tigrfam_target db:TIGRFAMs.hmm|TIGR02204 evalue:4.6e-262 score:870.0 best_domain_score:869.8 name:TIGR02204;
tm_num 5;
55326 53539 transmembrane_helix
ID metaerg.pl|01682
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology o53635-53703i53740-53808o54040-54108i54301-54369o54412-54480i;
55569 56003 CDS
ID metaerg.pl|01683
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799139.1 1 144 evalue:3.0e-57 qcov:100.00 identity:81.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.8e-28 score:99.1 best_domain_score:98.9 name:Usp;
56024 57550 CDS
ID metaerg.pl|01684
allgo_ids GO:0006814; GO:0015655; GO:0016020; GO:0032328; GO:0016021; GO:0005886;
allko_ids K03310;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799138.1 1 508 evalue:7.0e-258 qcov:100.00 identity:91.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01235;
pfam_desc Sodium:alanine symporter family;
pfam_id Na_Ala_symp;
pfam_target db:Pfam-A.hmm|PF01235.17 evalue:7.3e-129 score:429.7 best_domain_score:429.1 name:Na_Ala_symp;
sp YES;
sprot_desc Sodium/alanine symporter AgcS;
sprot_id sp|Q6LX42|AGCS_METMP;
sprot_target db:uniprot_sprot|sp|Q6LX42|AGCS_METMP 51 495 evalue:7.2e-68 qcov:87.60 identity:37.40;
tigrfam_acc TIGR00835;
tigrfam_desc amino acid carrier protein;
tigrfam_name agcS;
tigrfam_target db:TIGRFAMs.hmm|TIGR00835 evalue:1.1e-117 score:392.6 best_domain_score:392.3 name:TIGR00835;
tm_num 11;
56024 56083 signal_peptide
ID metaerg.pl|01685
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
56024 57550 transmembrane_helix
ID metaerg.pl|01686
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology o56081-56149i56168-56236o56372-56440i56561-56629o56672-56740i56777-56836o56864-56932i57044-57112o57218-57286i57344-57412o57425-57487i;
58228 57611 CDS
ID metaerg.pl|01687
allec_ids 2.1.1.17;
allgo_ids GO:0008168; GO:0004608; GO:0006656;
allko_ids K00599; K00568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799134.1 1 205 evalue:1.2e-99 qcov:100.00 identity:86.80;
kegg_pathway_id 00350; 00130; 00380; 00340; 00150; 00626; 00450;
kegg_pathway_name Tyrosine metabolism; Ubiquinone biosynthesis; Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism; Naphthalene and anthracene degradation; Selenoamino acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF02353; PF08241; PF08242; PF13489; PF13649; PF13847; PF07021; PF01209;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methionine biosynthesis protein MetW; ubiE/COQ5 methyltransferase family;
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; MetW; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:1.6e-06 score:26.8 best_domain_score:26.6 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:1.3e-24 score:85.9 best_domain_score:85.4 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:8.7e-17 score:60.9 best_domain_score:60.4 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:8.9e-20 score:70.4 best_domain_score:70.1 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.8e-22 score:79.1 best_domain_score:78.5 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:3.2e-16 score:58.7 best_domain_score:58.5 name:Methyltransf_31; db:Pfam-A.hmm|PF07021.12 evalue:4.6e-07 score:28.8 best_domain_score:28.3 name:MetW; db:Pfam-A.hmm|PF01209.18 evalue:1.5e-14 score:53.2 best_domain_score:52.9 name:Ubie_methyltran;
sprot_desc Phosphatidylethanolamine N-methyltransferase;
sprot_id sp|Q05197|PMTA_RHOSH;
sprot_target db:uniprot_sprot|sp|Q05197|PMTA_RHOSH 1 203 evalue:5.0e-60 qcov:99.00 identity:56.70;
58669 58337 CDS
ID metaerg.pl|01688
allgo_ids GO:0005506; GO:0051536; GO:0005198; GO:0016226; GO:0097428;
allko_ids K15724;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482160.1 3 110 evalue:3.6e-50 qcov:98.20 identity:89.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01521;
pfam_desc Iron-sulphur cluster biosynthesis;
pfam_id Fe-S_biosyn;
pfam_target db:Pfam-A.hmm|PF01521.20 evalue:1.5e-17 score:63.1 best_domain_score:63.0 name:Fe-S_biosyn;
sprot_desc Iron-sulfur cluster insertion protein ErpA;
sprot_id sp|Q4UZE2|ERPA_XANC8;
sprot_target db:uniprot_sprot|sp|Q4UZE2|ERPA_XANC8 6 110 evalue:2.6e-23 qcov:95.50 identity:50.50;
tigrfam_acc TIGR00049;
tigrfam_desc iron-sulfur cluster assembly accessory protein;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00049;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00049 evalue:1.8e-31 score:107.6 best_domain_score:107.4 name:TIGR00049;
58752 59954 CDS
ID metaerg.pl|01689
allec_ids 3.1.5.1;
allgo_ids GO:0016793;
allko_ids K01129;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246073.1 1 387 evalue:1.4e-197 qcov:96.80 identity:91.20;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01966; PF13286;
pfam_desc HD domain; Phosphohydrolase-associated domain;
pfam_id HD; HD_assoc;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:5.7e-16 score:58.1 best_domain_score:56.8 name:HD; db:Pfam-A.hmm|PF13286.6 evalue:8.5e-27 score:92.8 best_domain_score:90.1 name:HD_assoc;
sprot_desc Deoxyguanosinetriphosphate triphosphohydrolase-like protein;
sprot_id sp|A4WRT4|DGTL1_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WRT4|DGTL1_RHOS5 1 387 evalue:5.4e-167 qcov:96.80 identity:77.00;
tigrfam_acc TIGR00277; TIGR01353;
tigrfam_desc HDIG domain; putative dGTPase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name HDIG; dGTP_triPase;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00277 evalue:8.5e-07 score:27.9 best_domain_score:26.7 name:TIGR00277; db:TIGRFAMs.hmm|TIGR01353 evalue:1.9e-99 score:333.0 best_domain_score:332.8 name:TIGR01353;
60050 60484 CDS
ID metaerg.pl|01690
allgo_ids GO:0016021;
allko_ids K00088; K00641; K05847; K02806; K00970; K00974; K01697; K02000; K11527; K00031;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799127.1 1 144 evalue:4.0e-57 qcov:100.00 identity:82.60;
kegg_pathway_id 00450; 02010; 02060; 00920; 00271; 00480; 00983; 00720; 00230; 00260; 00020;
kegg_pathway_name Selenoamino acid metabolism; ABC transporters - General; Phosphotransferase system (PTS); Sulfur metabolism; Methionine metabolism; Glutathione metabolism; Drug metabolism - other enzymes; Reductive carboxylate cycle (CO2 fixation); Purine metabolism; Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00571;
pfam_desc CBS domain;
pfam_id CBS;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:3.5e-20 score:71.5 best_domain_score:40.0 name:CBS;
sprot_desc CBS domain-containing protein CBSCBSPB2;
sprot_id sp|Q9SJQ5|Y2650_ARATH;
sprot_target db:uniprot_sprot|sp|Q9SJQ5|Y2650_ARATH 17 131 evalue:2.3e-11 qcov:79.90 identity:32.20;
60562 61062 CDS
ID metaerg.pl|01691
allec_ids 2.7.7.3;
allgo_ids GO:0003824; GO:0009058; GO:0005737; GO:0005524; GO:0004595; GO:0015937;
allko_ids K00954;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799125.1 1 166 evalue:1.6e-78 qcov:100.00 identity:91.60;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-4221; COA-PWY; PWY-4242; PANTOSYN-PWY;
metacyc_pathway_name superpathway of coenzyme A biosynthesis II (plants);; coenzyme A biosynthesis I (prokaryotic);; ; superpathway of coenzyme A biosynthesis I (bacteria);;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis;; ; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;;
pfam_acc PF01467;
pfam_desc Cytidylyltransferase-like;
pfam_id CTP_transf_like;
pfam_target db:Pfam-A.hmm|PF01467.26 evalue:7.2e-16 score:57.9 best_domain_score:57.5 name:CTP_transf_like;
sprot_desc Phosphopantetheine adenylyltransferase;
sprot_id sp|Q1GHM4|COAD_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GHM4|COAD_RUEST 1 165 evalue:1.0e-71 qcov:99.40 identity:83.60;
tigrfam_acc TIGR00125; TIGR01510;
tigrfam_desc cytidyltransferase-like domain; pantetheine-phosphate adenylyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cyt_tran_rel; coaD_prev_kdtB;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00125 evalue:3.7e-19 score:67.8 best_domain_score:66.7 name:TIGR00125; db:TIGRFAMs.hmm|TIGR01510 evalue:1.1e-56 score:190.3 best_domain_score:190.1 name:TIGR01510;
61462 61387 tRNA
ID metaerg.pl|01692
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
name tRNA_Trp_cca;
61495 62373 CDS
ID metaerg.pl|01693
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799194.1 1 292 evalue:1.6e-73 qcov:100.00 identity:50.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
62453 62659 CDS
ID metaerg.pl|01694
allgo_ids GO:0006605; GO:0006886; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799193.1 4 68 evalue:5.2e-23 qcov:95.60 identity:93.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00584;
pfam_desc SecE/Sec61-gamma subunits of protein translocation complex;
pfam_id SecE;
pfam_target db:Pfam-A.hmm|PF00584.20 evalue:4e-17 score:61.1 best_domain_score:60.8 name:SecE;
tigrfam_acc TIGR00964;
tigrfam_desc preprotein translocase, SecE subunit;
tigrfam_mainrole Protein fate;
tigrfam_name secE_bact;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00964 evalue:2.7e-16 score:58.4 best_domain_score:58.2 name:TIGR00964;
tm_num 1;
62453 62659 transmembrane_helix
ID metaerg.pl|01695
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i62540-62608o;
62842 63375 CDS
ID metaerg.pl|01696
allgo_ids GO:0006355; GO:0005829; GO:0006354; GO:0006353; GO:0032784; GO:0031564;
allko_ids K02601;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468800.1 1 177 evalue:3.8e-86 qcov:100.00 identity:93.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00467; PF02357;
pfam_desc KOW motif; Transcription termination factor nusG;
pfam_id KOW; NusG;
pfam_target db:Pfam-A.hmm|PF00467.29 evalue:3.8e-07 score:29.1 best_domain_score:27.7 name:KOW; db:Pfam-A.hmm|PF02357.19 evalue:1.1e-23 score:82.8 best_domain_score:82.4 name:NusG;
sprot_desc Transcription termination/antitermination protein NusG;
sprot_id sp|Q9KV35|NUSG_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KV35|NUSG_VIBCH 3 175 evalue:2.2e-48 qcov:97.70 identity:55.70;
tigrfam_acc TIGR00922;
tigrfam_desc transcription termination/antitermination factor NusG;
tigrfam_mainrole Transcription;
tigrfam_name nusG;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00922 evalue:7.3e-63 score:210.6 best_domain_score:210.4 name:TIGR00922;
63490 63942 CDS
ID metaerg.pl|01697
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0070180;
allko_ids K02867;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799191.1 1 150 evalue:1.3e-74 qcov:100.00 identity:96.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00298; PF03946;
pfam_desc Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain;
pfam_id Ribosomal_L11; Ribosomal_L11_N;
pfam_target db:Pfam-A.hmm|PF00298.19 evalue:7.5e-26 score:89.7 best_domain_score:88.8 name:Ribosomal_L11; db:Pfam-A.hmm|PF03946.14 evalue:1.3e-30 score:104.3 best_domain_score:103.2 name:Ribosomal_L11_N;
sprot_desc 50S ribosomal protein L11;
sprot_id sp|A1B011|RL11_PARDP;
sprot_target db:uniprot_sprot|sp|A1B011|RL11_PARDP 1 150 evalue:5.3e-59 qcov:100.00 identity:76.70;
tigrfam_acc TIGR01632;
tigrfam_desc ribosomal protein uL11;
tigrfam_mainrole Protein synthesis;
tigrfam_name L11_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01632 evalue:1.3e-56 score:189.6 best_domain_score:189.2 name:TIGR01632;
63947 64645 CDS
ID metaerg.pl|01698
allgo_ids GO:0015934; GO:0019843; GO:0003735; GO:0000049; GO:0006417; GO:0006412;
allko_ids K02863;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799190.1 1 231 evalue:3.2e-109 qcov:99.60 identity:91.30;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00687;
pfam_desc Ribosomal protein L1p/L10e family;
pfam_id Ribosomal_L1;
pfam_target db:Pfam-A.hmm|PF00687.21 evalue:4.6e-57 score:192.3 best_domain_score:192.1 name:Ribosomal_L1;
sprot_desc 50S ribosomal protein L1;
sprot_id sp|Q5LMQ0|RL1_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LMQ0|RL1_RUEPO 1 230 evalue:5.2e-106 qcov:99.10 identity:85.20;
tigrfam_acc TIGR01169;
tigrfam_desc ribosomal protein uL1;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplA_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01169 evalue:1e-100 score:335.0 best_domain_score:334.8 name:TIGR01169;
66313 65102 CDS
ID metaerg.pl|01699
allko_ids K05777;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481127.1 1 403 evalue:2.2e-198 qcov:100.00 identity:83.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01547; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:8.8e-06 score:25.1 best_domain_score:23.0 name:SBP_bac_1; db:Pfam-A.hmm|PF13416.6 evalue:1.3e-21 score:76.9 best_domain_score:76.4 name:SBP_bac_8;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P76223|YNJB_ECOLI;
sprot_target db:uniprot_sprot|sp|P76223|YNJB_ECOLI 27 401 evalue:3.8e-80 qcov:93.10 identity:39.20;
65102 65161 signal_peptide
ID metaerg.pl|01700
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
67000 66446 CDS
ID metaerg.pl|01701
allec_ids 3.2.2.-;
allgo_ids GO:0005829; GO:0016799; GO:0009691;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797916.1 5 183 evalue:1.2e-74 qcov:97.30 identity:79.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-5381; PWY-2681;
metacyc_pathway_name pyridine nucleotide cycling (plants);; trans-zeatin biosynthesis;;
metacyc_pathway_type NAD-Metabolism;; CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF18306; PF03641;
pfam_desc SLOG cluster4 family; Possible lysine decarboxylase;
pfam_id LDcluster4; Lysine_decarbox;
pfam_target db:Pfam-A.hmm|PF18306.1 evalue:5.2e-18 score:64.4 best_domain_score:64.1 name:LDcluster4; db:Pfam-A.hmm|PF03641.14 evalue:1.9e-37 score:127.5 best_domain_score:127.3 name:Lysine_decarbox;
sprot_desc Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase;
sprot_id sp|P48636|LOGH_PSEAE;
sprot_target db:uniprot_sprot|sp|P48636|LOGH_PSEAE 6 181 evalue:3.1e-37 qcov:95.70 identity:46.00;
tigrfam_acc TIGR00730;
tigrfam_desc TIGR00730 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00730;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00730 evalue:2.5e-53 score:179.6 best_domain_score:179.5 name:TIGR00730;
67105 68301 CDS
ID metaerg.pl|01702
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797918.1 1 396 evalue:4.5e-135 qcov:99.50 identity:66.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01476;
pfam_desc LysM domain;
pfam_id LysM;
pfam_target db:Pfam-A.hmm|PF01476.20 evalue:4.4e-07 score:29.1 best_domain_score:28.2 name:LysM;
tm_num 1;
67105 68301 transmembrane_helix
ID metaerg.pl|01703
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i67141-67200o;
68367 70193 CDS
ID metaerg.pl|01704
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887; GO:0046689;
allko_ids K01996; K02071; K06861; K02045; K05847; K02010; K02006; K02052; K02017; K02023; K02000; K10111; K06147;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797923.1 1 608 evalue:5.2e-300 qcov:100.00 identity:89.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:3.1e-31 score:108.3 best_domain_score:107.9 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:7.7e-33 score:113.1 best_domain_score:112.3 name:ABC_tran;
sprot_desc ATM1-type heavy metal exporter;
sprot_id sp|Q2G506|ATM1_NOVAD;
sprot_target db:uniprot_sprot|sp|Q2G506|ATM1_NOVAD 11 607 evalue:8.1e-167 qcov:98.20 identity:53.30;
tm_num 5;
68367 70193 transmembrane_helix
ID metaerg.pl|01705
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i68502-68570o68598-68666i68856-68924o68934-69002i69180-69248o;
70236 71507 CDS
ID metaerg.pl|01706
allgo_ids GO:0016491; GO:0055114; GO:0005829;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797925.1 33 423 evalue:1.5e-176 qcov:92.40 identity:79.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01266; PF00890; PF12831; PF01134; PF03486; PF13450; PF07992; PF13738;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id DAO; FAD_binding_2; FAD_oxidored; GIDA; HI0933_like; NAD_binding_8; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:1.2e-09 score:37.4 best_domain_score:26.0 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:5.6e-12 score:44.7 best_domain_score:37.0 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:8.1e-08 score:31.2 best_domain_score:30.7 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:1.8e-08 score:33.1 best_domain_score:20.7 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:9.2e-140 score:465.2 best_domain_score:465.0 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:3.5e-06 score:26.4 best_domain_score:25.0 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:3.5e-08 score:32.2 best_domain_score:21.1 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:1.6e-07 score:30.1 best_domain_score:15.0 name:Pyr_redox_3;
sprot_desc hypothetical protein;
sprot_id sp|P37631|YHIN_ECOLI;
sprot_target db:uniprot_sprot|sp|P37631|YHIN_ECOLI 33 423 evalue:3.5e-116 qcov:92.40 identity:53.30;
tigrfam_acc TIGR00275;
tigrfam_desc flavoprotein, HI0933 family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00275;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00275 evalue:2.4e-119 score:397.9 best_domain_score:397.7 name:TIGR00275;
71634 73919 CDS
ID metaerg.pl|01707
allec_ids 2.7.13.3;
allgo_ids GO:0007165; GO:0016021; GO:0005886; GO:0005524; GO:0000155; GO:0009399; GO:0006355;
allko_ids K10681; K07676; K06379; K07650; K01769; K07644; K13532; K07709; K11357; K10125; K11629; K04757; K07769; K11520; K11383; K02486; K07717; K07675; K10942; K13040; K07680; K07647; K10916; K08479; K07674; K03388; K02668; K01768; K07656; K07710; K07640; K07716; K07697; K02489; K07636; K07653; K07638; K02480; K08801; K02482; K07655; K07678; K10715; K13587; K02030; K11527; K07642; K11711; K11640; K02484; K08282; K07704; K07645; K07708; K07677; K02491; K07643; K03407; K07649; K00936; K07654; K07652; K07673; K07639; K08475; K07646; K07641; K13598; K11328; K13533; K08884; K07711; K07768; K11633; K11354; K07778; K07698; K07718; K07651; K07648; K02478; K07679;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798020.1 24 758 evalue:0.0e+00 qcov:96.60 identity:82.60;
kegg_pathway_id 03090; 02020; 05111; 00230; 00790;
kegg_pathway_name Type II secretion system; Two-component system - General; Vibrio cholerae pathogenic cycle; Purine metabolism; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00672; PF02518; PF00512; PF13188;
pfam_desc HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain;
pfam_id HAMP; HATPase_c; HisKA; PAS_8;
pfam_target db:Pfam-A.hmm|PF00672.25 evalue:4.7e-14 score:51.7 best_domain_score:51.7 name:HAMP; db:Pfam-A.hmm|PF02518.26 evalue:5.9e-15 score:55.0 best_domain_score:53.9 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:2.4e-10 score:39.5 best_domain_score:37.6 name:HisKA; db:Pfam-A.hmm|PF13188.7 evalue:5.1e-06 score:25.6 best_domain_score:23.8 name:PAS_8;
sprot_desc Nitrogen regulation protein NtrY;
sprot_id sp|Q04850|NTRY_AZOC5;
sprot_target db:uniprot_sprot|sp|Q04850|NTRY_AZOC5 34 724 evalue:5.7e-125 qcov:90.80 identity:41.90;
tm_num 4;
71634 73919 transmembrane_helix
ID metaerg.pl|01708
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology o71718-71786i71805-71873o71949-72017i72522-72590o;
73916 75301 CDS
ID metaerg.pl|01709
allgo_ids GO:0043565; GO:0005524; GO:0008134; GO:0009399; GO:0000160; GO:0006355;
allko_ids K07642; K11711; K11356; K11640; K00760; K02484; K07704; K08282; K01937; K07708; K07645; K07677; K11231; K03407; K07637; K07654; K07682; K07652; K07646; K07641; K01120; K07673; K07639; K08475; K07711; K11354; K07778; K07768; K07651; K07718; K02478; K07679; K07648; K10681; K07676; K06379; K01769; K07644; K07709; K04757; K11357; K10125; K02486; K13761; K11383; K12767; K07769; K07717; K07675; K07647; K08479; K10916; K02668; K03388; K07710; K01768; K02489; K07716; K07653; K07636; K02482; K02480; K07678; K10715; K11527; K13599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797927.1 1 460 evalue:2.5e-230 qcov:99.80 identity:89.10;
kegg_pathway_id 00790; 03090; 04011; 02020; 00240; 05111; 00230; 00983;
kegg_pathway_name Folate biosynthesis; Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Drug metabolism - other enzymes;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF02954; PF00072; PF00158; PF14532;
pfam_desc Bacterial regulatory protein, Fis family; Response regulator receiver domain; Sigma-54 interaction domain; Sigma-54 interaction domain;
pfam_id HTH_8; Response_reg; Sigma54_activat; Sigma54_activ_2;
pfam_target db:Pfam-A.hmm|PF02954.19 evalue:1.4e-10 score:40.0 best_domain_score:38.1 name:HTH_8; db:Pfam-A.hmm|PF00072.24 evalue:8.4e-28 score:96.0 best_domain_score:95.0 name:Response_reg; db:Pfam-A.hmm|PF00158.26 evalue:6.9e-43 score:145.5 best_domain_score:144.8 name:Sigma54_activat; db:Pfam-A.hmm|PF14532.6 evalue:8.1e-22 score:77.1 best_domain_score:76.3 name:Sigma54_activ_2;
sprot_desc Nitrogen assimilation regulatory protein NtrX;
sprot_id sp|Q04849|NTRX_AZOC5;
sprot_target db:uniprot_sprot|sp|Q04849|NTRX_AZOC5 3 451 evalue:6.2e-127 qcov:97.40 identity:54.00;
75387 76763 CDS
ID metaerg.pl|01710
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0005886; GO:0015079;
allko_ids K03499;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797929.1 1 458 evalue:1.7e-234 qcov:100.00 identity:91.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF02737; PF01262; PF01266; PF03807; PF01494; PF00056; PF13241; PF13450; PF00070; PF07992; PF03435; PF01488; PF02080; PF02254; PF13478;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Alanine dehydrogenase/PNT, C-terminal domain; FAD dependent oxidoreductase; NADP oxidoreductase coenzyme F420-dependent; FAD binding domain; lactate/malate dehydrogenase, NAD binding domain; Putative NAD(P)-binding; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Saccharopine dehydrogenase NADP binding domain; Shikimate / quinate 5-dehydrogenase; TrkA-C domain; TrkA-N domain; XdhC Rossmann domain;
pfam_id 3HCDH_N; AlaDh_PNT_C; DAO; F420_oxidored; FAD_binding_3; Ldh_1_N; NAD_binding_7; NAD_binding_8; Pyr_redox; Pyr_redox_2; Sacchrp_dh_NADP; Shikimate_DH; TrkA_C; TrkA_N; XdhC_C;
pfam_target db:Pfam-A.hmm|PF02737.18 evalue:1e-07 score:31.2 best_domain_score:20.5 name:3HCDH_N; db:Pfam-A.hmm|PF01262.21 evalue:4.4e-06 score:25.4 best_domain_score:13.8 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF01266.24 evalue:4.3e-08 score:32.3 best_domain_score:17.5 name:DAO; db:Pfam-A.hmm|PF03807.17 evalue:9.9e-05 score:22.1 best_domain_score:10.0 name:F420_oxidored; db:Pfam-A.hmm|PF01494.19 evalue:3.6e-06 score:25.7 best_domain_score:20.5 name:FAD_binding_3; db:Pfam-A.hmm|PF00056.23 evalue:1.6e-05 score:24.3 best_domain_score:12.6 name:Ldh_1_N; db:Pfam-A.hmm|PF13241.6 evalue:4.9e-12 score:45.4 best_domain_score:24.0 name:NAD_binding_7; db:Pfam-A.hmm|PF13450.6 evalue:2e-05 score:23.9 best_domain_score:12.4 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:1.3e-10 score:40.9 best_domain_score:20.1 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:9.5e-09 score:34.1 best_domain_score:18.0 name:Pyr_redox_2; db:Pfam-A.hmm|PF03435.18 evalue:7.1e-08 score:32.0 best_domain_score:17.0 name:Sacchrp_dh_NADP; db:Pfam-A.hmm|PF01488.20 evalue:2.7e-10 score:39.7 best_domain_score:20.1 name:Shikimate_DH; db:Pfam-A.hmm|PF02080.21 evalue:1.5e-23 score:81.6 best_domain_score:42.5 name:TrkA_C; db:Pfam-A.hmm|PF02254.18 evalue:5.6e-47 score:158.0 best_domain_score:87.1 name:TrkA_N; db:Pfam-A.hmm|PF13478.6 evalue:2.7e-08 score:33.6 best_domain_score:16.8 name:XdhC_C;
sprot_desc Trk system potassium uptake protein TrkA;
sprot_id sp|Q04856|TRKA_AZOC5;
sprot_target db:uniprot_sprot|sp|Q04856|TRKA_AZOC5 1 458 evalue:5.1e-121 qcov:100.00 identity:46.70;
76844 78337 CDS
ID metaerg.pl|01711
allgo_ids GO:0006812; GO:0008324; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797931.1 1 492 evalue:4.6e-169 qcov:99.00 identity:68.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF02386;
pfam_desc Cation transport protein;
pfam_id TrkH;
pfam_target db:Pfam-A.hmm|PF02386.16 evalue:8.9e-08 score:30.2 best_domain_score:15.9 name:TrkH;
tm_num 12;
76844 78337 transmembrane_helix
ID metaerg.pl|01712
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i76847-76906o76934-76993i77030-77098o77219-77287i77405-77473o77531-77599i77678-77737o77765-77833i77852-77920o78062-78130i78149-78217o78245-78313i;
78482 78715 CDS
ID metaerg.pl|01713
allgo_ids GO:0003723; GO:0006355;
allko_ids K03666;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797933.1 1 77 evalue:5.4e-37 qcov:100.00 identity:100.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF17209;
pfam_desc Hfq protein;
pfam_id Hfq;
pfam_target db:Pfam-A.hmm|PF17209.3 evalue:2.7e-34 score:115.9 best_domain_score:115.7 name:Hfq;
sprot_desc RNA-binding protein Hfq;
sprot_id sp|A1B9J4|HFQ_PARDP;
sprot_target db:uniprot_sprot|sp|A1B9J4|HFQ_PARDP 1 77 evalue:2.9e-37 qcov:100.00 identity:94.80;
tigrfam_acc TIGR02383;
tigrfam_desc RNA chaperone Hfq;
tigrfam_mainrole Regulatory functions;
tigrfam_name Hfq;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02383 evalue:3.6e-34 score:115.6 best_domain_score:115.4 name:TIGR02383;
78850 80043 CDS
ID metaerg.pl|01714
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0046872;
allko_ids K03665;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797935.1 1 392 evalue:6.2e-177 qcov:98.70 identity:84.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF02421; PF16360; PF13167; PF01926;
pfam_desc Ferrous iron transport protein B; GTP-binding GTPase Middle Region; GTP-binding GTPase N-terminal; 50S ribosome-binding GTPase;
pfam_id FeoB_N; GTP-bdg_M; GTP-bdg_N; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF02421.18 evalue:8.9e-05 score:21.3 best_domain_score:20.4 name:FeoB_N; db:Pfam-A.hmm|PF16360.5 evalue:4.6e-26 score:90.5 best_domain_score:90.5 name:GTP-bdg_M; db:Pfam-A.hmm|PF13167.6 evalue:2.5e-21 score:75.4 best_domain_score:73.8 name:GTP-bdg_N; db:Pfam-A.hmm|PF01926.23 evalue:9.7e-20 score:70.0 best_domain_score:68.2 name:MMR_HSR1;
sprot_desc GTPase HflX;
sprot_id sp|A0L4B2|HFLX_MAGMM;
sprot_target db:uniprot_sprot|sp|A0L4B2|HFLX_MAGMM 9 363 evalue:1.4e-90 qcov:89.40 identity:52.10;
tigrfam_acc TIGR03156;
tigrfam_desc GTP-binding protein HflX;
tigrfam_mainrole Unknown function;
tigrfam_name GTP_HflX;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR03156 evalue:1e-125 score:418.5 best_domain_score:418.3 name:TIGR03156;
80182 81102 CDS
ID metaerg.pl|01715
allec_ids 3.5.1.108; 3.5.1.-;
allgo_ids GO:0008759; GO:0009245; GO:0046872; GO:0103117;
allko_ids K02535;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797937.1 1 306 evalue:3.4e-130 qcov:100.00 identity:77.10;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6548; PWY-5784; KDO-NAGLIPASYN-PWY; PWY-5327; PWY-1822; LPSSYN-PWY; NAGLIPASYN-PWY; PWY-0; LYSDEGII-PWY;
metacyc_pathway_name ; indole-3-acetate inactivation VIII;; superpathway of (Kdo)2-lipid A biosynthesis;; superpathway of L-lysine degradation;; indole-3-acetate activation I;; superpathway of lipopolysaccharide biosynthesis;; lipid IVA biosynthesis;; putrescine degradation III;; L-lysine degradation III;;
metacyc_pathway_type ; Indole-3-Acetate-Inactivation;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; LYSINE-DEG; Super-Pathways;; Activation;; Lipid-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis;; Putrescine-Degradation;; LYSINE-DEG;;
pfam_acc PF03331;
pfam_desc UDP-3-O-acyl N-acetylglycosamine deacetylase;
pfam_id LpxC;
pfam_target db:Pfam-A.hmm|PF03331.13 evalue:3.2e-94 score:314.6 best_domain_score:314.4 name:LpxC;
sprot_desc UDP-3-O-acyl-N-acetylglucosamine deacetylase;
sprot_id sp|B4RFF2|LPXC_PHEZH;
sprot_target db:uniprot_sprot|sp|B4RFF2|LPXC_PHEZH 2 287 evalue:3.8e-64 qcov:93.50 identity:47.60;
tigrfam_acc TIGR00325;
tigrfam_desc UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;
tigrfam_mainrole Cell envelope;
tigrfam_name lpxC;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00325 evalue:5.5e-85 score:284.4 best_domain_score:284.1 name:TIGR00325;
81203 82042 CDS
ID metaerg.pl|01716
allgo_ids GO:0005515; GO:0009279; GO:0043165; GO:0051205;
allko_ids K05807;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798022.1 1 279 evalue:8.6e-141 qcov:100.00 identity:88.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF13428; PF13512; PF14559; PF13174; PF13525;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Outer membrane lipoprotein;
pfam_id TPR_14; TPR_18; TPR_19; TPR_6; YfiO;
pfam_target db:Pfam-A.hmm|PF13428.6 evalue:4.1e-07 score:29.5 best_domain_score:13.2 name:TPR_14; db:Pfam-A.hmm|PF13512.6 evalue:7e-13 score:48.2 best_domain_score:43.9 name:TPR_18; db:Pfam-A.hmm|PF14559.6 evalue:4.1e-08 score:32.9 best_domain_score:18.0 name:TPR_19; db:Pfam-A.hmm|PF13174.6 evalue:4e-14 score:51.5 best_domain_score:24.5 name:TPR_6; db:Pfam-A.hmm|PF13525.6 evalue:1.2e-44 score:151.7 best_domain_score:151.4 name:YfiO;
sp YES;
sprot_desc Outer membrane protein assembly factor BamD;
sprot_id sp|Q9A6U9|BAMD_CAUVC;
sprot_target db:uniprot_sprot|sp|Q9A6U9|BAMD_CAUVC 55 258 evalue:4.0e-52 qcov:73.10 identity:47.50;
tigrfam_acc TIGR03302;
tigrfam_desc outer membrane assembly lipoprotein YfiO;
tigrfam_mainrole Protein fate;
tigrfam_name OM_YfiO;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR03302 evalue:4.1e-74 score:248.2 best_domain_score:248.0 name:TIGR03302;
81203 81265 lipoprotein_signal_peptide
ID metaerg.pl|01717
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
82075 83757 CDS
ID metaerg.pl|01718
allgo_ids GO:0005524; GO:0006310; GO:0006281;
allko_ids K03631;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797939.1 1 548 evalue:1.3e-249 qcov:97.90 identity:85.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF13476; PF02463;
pfam_desc AAA domain; RecF/RecN/SMC N terminal domain;
pfam_id AAA_23; SMC_N;
pfam_target db:Pfam-A.hmm|PF13476.6 evalue:1.8e-09 score:37.6 best_domain_score:37.0 name:AAA_23; db:Pfam-A.hmm|PF02463.19 evalue:4.2e-16 score:58.3 best_domain_score:57.7 name:SMC_N;
sprot_desc DNA repair protein RecN;
sprot_id sp|Q9PB02|RECN_XYLFA;
sprot_target db:uniprot_sprot|sp|Q9PB02|RECN_XYLFA 1 547 evalue:4.7e-60 qcov:97.70 identity:33.20;
tigrfam_acc TIGR00634;
tigrfam_desc DNA repair protein RecN;
tigrfam_mainrole DNA metabolism;
tigrfam_name recN;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00634 evalue:1.3e-136 score:456.0 best_domain_score:455.8 name:TIGR00634;
83799 84206 CDS
ID metaerg.pl|01719
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797941.1 28 135 evalue:4.6e-23 qcov:80.00 identity:65.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
sp YES;
tm_num 1;
83799 83873 lipoprotein_signal_peptide
ID metaerg.pl|01720
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
83799 84206 transmembrane_helix
ID metaerg.pl|01721
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology o83826-83894i;
84530 84321 CDS
ID metaerg.pl|01722
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798024.1 1 69 evalue:1.1e-23 qcov:100.00 identity:84.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
84718 84642 tRNA
ID metaerg.pl|01723
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
name tRNA_His_gtg;
84798 85430 CDS
ID metaerg.pl|01724
allec_ids 2.7.7.18;
allgo_ids GO:0003824; GO:0009058; GO:0005524; GO:0004515; GO:0009435;
allko_ids K00969;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482047.1 1 210 evalue:1.4e-82 qcov:100.00 identity:70.50;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY0-781; PWY-5653; NADSYN-PWY; PWY-3502; PWY-5381; PYRIDNUCSYN-PWY;
metacyc_pathway_name aspartate superpathway;; NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde;; NAD de novo biosynthesis II (from tryptophan);; superpathway of NAD biosynthesis in eukaryotes;; pyridine nucleotide cycling (plants);; NAD de novo biosynthesis I (from aspartate);;
metacyc_pathway_type Super-Pathways;; NAD-SYN;; NAD-SYN; Super-Pathways;; NAD-SYN; Super-Pathways;; NAD-Metabolism;; NAD-SYN;;
pfam_acc PF01467;
pfam_desc Cytidylyltransferase-like;
pfam_id CTP_transf_like;
pfam_target db:Pfam-A.hmm|PF01467.26 evalue:4.6e-22 score:78.0 best_domain_score:77.6 name:CTP_transf_like;
sprot_desc Probable nicotinate-nucleotide adenylyltransferase;
sprot_id sp|Q5LW93|NADD_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LW93|NADD_RUEPO 6 209 evalue:4.5e-64 qcov:97.10 identity:58.00;
85572 86681 CDS
ID metaerg.pl|01725
allgo_ids GO:0055085; GO:0042597; GO:0031317; GO:0046872; GO:0043177; GO:0042803; GO:0015849; GO:0071702;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795895.1 1 369 evalue:7.7e-198 qcov:100.00 identity:93.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:4.9e-37 score:127.1 best_domain_score:126.7 name:DctP;
sp YES;
sprot_desc Alpha-keto acid-binding periplasmic protein TakP;
sprot_id sp|Q3J1R2|TAKP_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J1R2|TAKP_RHOS4 1 331 evalue:9.3e-57 qcov:89.70 identity:36.30;
tigrfam_acc TIGR01409;
tigrfam_desc Tat (twin-arginine translocation) pathway signal sequence;
tigrfam_mainrole Protein fate;
tigrfam_name TAT_signal_seq;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01409 evalue:0.00028 score:20.3 best_domain_score:18.9 name:TIGR01409;
85572 85655 signal_peptide
ID metaerg.pl|01726
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
86758 87315 CDS
ID metaerg.pl|01727
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795896.1 1 185 evalue:5.8e-93 qcov:100.00 identity:91.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:8.1e-16 score:57.4 best_domain_score:56.9 name:DctQ;
tm_num 4;
86758 87315 transmembrane_helix
ID metaerg.pl|01728
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i86818-86871o86914-86970i87031-87099o87181-87249i;
87317 88705 CDS
ID metaerg.pl|01729
allgo_ids GO:0016021; GO:0005886; GO:0022857;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470492.1 1 462 evalue:4.9e-234 qcov:100.00 identity:95.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:8.6e-89 score:297.4 best_domain_score:296.4 name:DctM;
sprot_desc hypothetical protein;
sprot_id sp|P40800|YGIK_SALTY;
sprot_target db:uniprot_sprot|sp|P40800|YGIK_SALTY 1 460 evalue:1.5e-24 qcov:99.60 identity:27.30;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:2.2e-94 score:315.6 best_domain_score:315.4 name:TIGR00786;
tm_num 12;
87317 88705 transmembrane_helix
ID metaerg.pl|01730
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology o87359-87463i87497-87565o87623-87727i87761-87829o87914-87982i88061-88129o88142-88198i88232-88300o88343-88411i88424-88492o88505-88573i88610-88678o;
88992 89786 CDS
ID metaerg.pl|01731
allec_ids 2.7.7.38;
allgo_ids GO:0005737; GO:0008690; GO:0033468; GO:0009103;
allko_ids K00979;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796003.1 1 262 evalue:1.2e-123 qcov:99.20 identity:83.60;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id KDO-NAGLIPASYN-PWY; PWY-5111; PWY-1269; LPSSYN-PWY;
metacyc_pathway_name superpathway of (Kdo)2-lipid A biosynthesis;; ; CMP-3-deoxy-D-manno-octulosonate biosynthesis;; superpathway of lipopolysaccharide biosynthesis;;
metacyc_pathway_type Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ; CMP-KDO-Biosynthesis; CMP-Sugar-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;;
pfam_acc PF02348; PF12804;
pfam_desc Cytidylyltransferase; MobA-like NTP transferase domain;
pfam_id CTP_transf_3; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF02348.19 evalue:1.1e-28 score:99.9 best_domain_score:99.1 name:CTP_transf_3; db:Pfam-A.hmm|PF12804.7 evalue:1.6e-06 score:27.8 best_domain_score:25.9 name:NTP_transf_3;
sprot_desc 3-deoxy-manno-octulosonate cytidylyltransferase;
sprot_id sp|Q0AST1|KDSB_MARMM;
sprot_target db:uniprot_sprot|sp|Q0AST1|KDSB_MARMM 1 262 evalue:2.5e-56 qcov:99.20 identity:43.20;
89783 90601 CDS
ID metaerg.pl|01732
allec_ids 2.5.1.55;
allgo_ids GO:0009058; GO:0005737; GO:0008676; GO:0019294;
allko_ids K01850; K01626; K01713; K04518; K04516; K04093; K03856; K04092; K14187; K14170; K01627; K13853;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657478.1 1 270 evalue:1.5e-126 qcov:99.30 identity:83.70;
kegg_pathway_id 00540; 00400;
kegg_pathway_name Lipopolysaccharide biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-1269; LPSSYN-PWY; PWY-5111; KDO-NAGLIPASYN-PWY;
metacyc_pathway_name CMP-3-deoxy-D-manno-octulosonate biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; ; superpathway of (Kdo)2-lipid A biosynthesis;;
metacyc_pathway_type CMP-KDO-Biosynthesis; CMP-Sugar-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;; ; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;;
pfam_acc PF00793;
pfam_desc DAHP synthetase I family;
pfam_id DAHP_synth_1;
pfam_target db:Pfam-A.hmm|PF00793.20 evalue:8.5e-69 score:230.7 best_domain_score:230.4 name:DAHP_synth_1;
sprot_desc 2-dehydro-3-deoxyphosphooctonate aldolase;
sprot_id sp|Q0BTX5|KDSA_GRABC;
sprot_target db:uniprot_sprot|sp|Q0BTX5|KDSA_GRABC 3 272 evalue:9.8e-104 qcov:99.30 identity:66.70;
tigrfam_acc TIGR01362;
tigrfam_desc 3-deoxy-8-phosphooctulonate synthase;
tigrfam_mainrole Cell envelope;
tigrfam_name KDO8P_synth;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01362 evalue:9.4e-121 score:401.0 best_domain_score:400.8 name:TIGR01362;
91675 90611 CDS
ID metaerg.pl|01733
allec_ids 4.1.1.37;
allgo_ids GO:0004853; GO:0006779; GO:0005737; GO:0006782;
allko_ids K01599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469887.1 7 353 evalue:1.3e-181 qcov:98.00 identity:90.80;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-5531; HEMESYN2-PWY; PWY-5529; PWY-5918; PWY-5920; CHLOROPHYLL-SYN; PWY0-1415; HEME-BIOSYNTHESIS-II;
metacyc_pathway_name 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; heme b biosynthesis II (anaerobic);; superpathway of bacteriochlorophyll a biosynthesis;; superpathay of heme b biosynthesis from glutamate;; superpathway of b heme biosynthesis from glycine;; 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);; superpathway of heme b biosynthesis from uroporphyrinogen-III;; heme b biosynthesis I (aerobic);;
metacyc_pathway_type Chlorophyllide-a-Biosynthesis;; Heme-b-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis;;
pfam_acc PF01208;
pfam_desc Uroporphyrinogen decarboxylase (URO-D);
pfam_id URO-D;
pfam_target db:Pfam-A.hmm|PF01208.17 evalue:1.7e-110 score:368.7 best_domain_score:368.5 name:URO-D;
sprot_desc Uroporphyrinogen decarboxylase;
sprot_id sp|Q5LMB5|DCUP_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LMB5|DCUP_RUEPO 13 350 evalue:1.1e-166 qcov:95.50 identity:83.70;
tigrfam_acc TIGR01464;
tigrfam_desc uroporphyrinogen decarboxylase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemE;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01464 evalue:6.3e-124 score:412.5 best_domain_score:412.3 name:TIGR01464;
91780 92742 CDS
ID metaerg.pl|01734
allec_ids 2.5.1.61;
allgo_ids GO:0004418; GO:0033014; GO:0018160; GO:0006782;
allko_ids K01749;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469886.1 3 320 evalue:6.8e-158 qcov:99.40 identity:89.30;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-5529; PWY-5189; PWY-5188; PWY-5918; PWY-5920;
metacyc_pathway_name superpathway of bacteriochlorophyll a biosynthesis;; tetrapyrrole biosynthesis II (from glycine);; tetrapyrrole biosynthesis I (from glutamate);; superpathay of heme b biosynthesis from glutamate;; superpathway of b heme biosynthesis from glycine;;
metacyc_pathway_type Chlorophyll-a-Biosynthesis; Super-Pathways;; Tetrapyrrole-Biosynthesis;; Tetrapyrrole-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF01379; PF03900;
pfam_desc Porphobilinogen deaminase, dipyromethane cofactor binding domain; Porphobilinogen deaminase, C-terminal domain;
pfam_id Porphobil_deam; Porphobil_deamC;
pfam_target db:Pfam-A.hmm|PF01379.20 evalue:1e-75 score:252.9 best_domain_score:252.7 name:Porphobil_deam; db:Pfam-A.hmm|PF03900.15 evalue:3.5e-16 score:58.6 best_domain_score:57.7 name:Porphobil_deamC;
sprot_desc Porphobilinogen deaminase;
sprot_id sp|A1B853|HEM3_PARDP;
sprot_target db:uniprot_sprot|sp|A1B853|HEM3_PARDP 8 319 evalue:3.2e-114 qcov:97.50 identity:68.30;
tigrfam_acc TIGR00212;
tigrfam_desc hydroxymethylbilane synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemC;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00212 evalue:2.4e-103 score:344.3 best_domain_score:344.2 name:TIGR00212;
92798 94222 CDS
ID metaerg.pl|01735
allgo_ids GO:0005524;
allko_ids K06918;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796008.1 1 473 evalue:1.3e-226 qcov:99.80 identity:83.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF04317;
pfam_desc YcjX-like family, DUF463;
pfam_id DUF463;
pfam_target db:Pfam-A.hmm|PF04317.12 evalue:1e-154 score:515.0 best_domain_score:514.8 name:DUF463;
sprot_desc hypothetical protein;
sprot_id sp|P76046|YCJX_ECOLI;
sprot_target db:uniprot_sprot|sp|P76046|YCJX_ECOLI 34 474 evalue:8.0e-69 qcov:93.00 identity:35.70;
94219 95205 CDS
ID metaerg.pl|01736
allgo_ids GO:0016021; GO:0005886;
allko_ids K08990;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796009.1 1 327 evalue:3.7e-127 qcov:99.70 identity:77.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF05128;
pfam_desc Domain of unknown function (DUF697);
pfam_id DUF697;
pfam_target db:Pfam-A.hmm|PF05128.12 evalue:1.1e-46 score:157.8 best_domain_score:155.6 name:DUF697;
sprot_desc hypothetical protein;
sprot_id sp|Q92PF5|Y1807_RHIME;
sprot_target db:uniprot_sprot|sp|Q92PF5|Y1807_RHIME 43 323 evalue:1.4e-43 qcov:85.70 identity:42.20;
tigrfam_acc TIGR01620;
tigrfam_desc TIGR01620 family protein;
tigrfam_name hyp_HI0043;
tigrfam_target db:TIGRFAMs.hmm|TIGR01620 evalue:3.8e-55 score:186.3 best_domain_score:185.9 name:TIGR01620;
tm_num 3;
94219 95205 transmembrane_helix
ID metaerg.pl|01737
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i94360-94428o94459-94527i94810-94878o;
95876 95310 CDS
ID metaerg.pl|01738
allgo_ids GO:0051920; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796085.1 1 188 evalue:1.1e-83 qcov:100.00 identity:86.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF02627;
pfam_desc Carboxymuconolactone decarboxylase family;
pfam_id CMD;
pfam_target db:Pfam-A.hmm|PF02627.20 evalue:1.4e-15 score:56.4 best_domain_score:39.0 name:CMD;
tigrfam_acc TIGR00778; TIGR01926;
tigrfam_desc alkylhydroperoxidase AhpD family core domain; uncharacterized peroxidase-related enzyme;
tigrfam_mainrole Unknown function;
tigrfam_name ahpD_dom; peroxid_rel;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00778 evalue:7.4e-11 score:40.5 best_domain_score:38.9 name:TIGR00778; db:TIGRFAMs.hmm|TIGR01926 evalue:1.7e-59 score:199.8 best_domain_score:199.6 name:TIGR01926;
96593 95880 CDS
ID metaerg.pl|01739
allgo_ids GO:0016747;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796119.1 10 235 evalue:1.1e-77 qcov:95.40 identity:67.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00583; PF13673; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.4e-08 score:34.3 best_domain_score:33.7 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:5.4e-06 score:25.6 best_domain_score:25.1 name:Acetyltransf_10; db:Pfam-A.hmm|PF08445.10 evalue:4.3e-06 score:25.8 best_domain_score:24.9 name:FR47;
sp YES;
95880 95942 signal_peptide
ID metaerg.pl|01740
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
97321 96590 CDS
ID metaerg.pl|01741
allec_ids 2.7.7.2;
allgo_ids GO:0005829; GO:0005886; GO:0005524; GO:0003919; GO:0006747;
allko_ids K00953;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479026.1 1 243 evalue:1.6e-111 qcov:100.00 identity:86.80;
kegg_pathway_id 00740;
kegg_pathway_name Riboflavin metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6167; RIBOSYN2-PWY; PWY66-366; PWY-6168;
metacyc_pathway_name flavin biosynthesis II (archaea);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis IV (mammalian);; flavin biosynthesis III (fungi);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00994;
pfam_desc Probable molybdopterin binding domain;
pfam_id MoCF_biosynth;
pfam_target db:Pfam-A.hmm|PF00994.24 evalue:4.6e-30 score:103.4 best_domain_score:103.0 name:MoCF_biosynth;
sprot_desc FAD synthase;Molybdenum cofactor biosynthesis protein-like region;FAD synthase region;
sprot_id sp|Q8R123|FAD1_MOUSE;
sprot_target db:uniprot_sprot|sp|Q8R123|FAD1_MOUSE 5 240 evalue:6.4e-22 qcov:97.10 identity:30.90;
97933 97391 CDS
ID metaerg.pl|01742
allec_ids 1.-.-.-;
allgo_ids GO:0016491; GO:0005829; GO:0010181; GO:0052873; GO:0042802; GO:0003955; GO:0016655; GO:0042803; GO:0055114;
allko_ids K19784;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469954.1 1 180 evalue:2.1e-76 qcov:100.00 identity:78.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-5987; PWY-5479; PWY-5469; PWYG-321; PWY-6113; PWY-5271; PWY-4302; PWY-5826; PWY-2821;
metacyc_pathway_name sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sesamin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;;
metacyc_pathway_type QUINONE-SYN;; LIGNAN-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;;
pfam_acc PF02525; PF03358;
pfam_desc Flavodoxin-like fold; NADPH-dependent FMN reductase;
pfam_id Flavodoxin_2; FMN_red;
pfam_target db:Pfam-A.hmm|PF02525.17 evalue:4.8e-06 score:25.6 best_domain_score:25.2 name:Flavodoxin_2; db:Pfam-A.hmm|PF03358.15 evalue:4.5e-34 score:116.7 best_domain_score:116.2 name:FMN_red;
sprot_desc NAD(P)H-dependent FMN reductase PA1204;
sprot_id sp|Q9I4D4|FMNRE_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I4D4|FMNRE_PSEAE 3 173 evalue:9.2e-26 qcov:95.00 identity:39.70;
98041 99696 CDS
ID metaerg.pl|01743
allec_ids 2.2.1.6;
allgo_ids GO:0003824; GO:0030976; GO:0003984; GO:0050660; GO:0000287; GO:0009097; GO:0009099;
allko_ids K01568; K04103; K01576; K12253; K01652; K12732; K01637; K03852;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469879.1 1 551 evalue:4.3e-285 qcov:100.00 identity:86.20;
kegg_pathway_id 00290; 00622; 00010; 00430; 00770; 00380; 00362; 00630; 00660; 00650;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Toluene and xylene degradation; Glycolysis / Gluconeogenesis; Taurine and hypotaurine metabolism; Pantothenate and CoA biosynthesis; Tryptophan metabolism; Benzoate degradation via hydroxylation; Glyoxylate and dicarboxylate metabolism; C5-Branched dibasic acid metabolism; Butanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id VALSYN-PWY; PWY-5101; PWY-3001; PWY-5938; THREOCAT-PWY; PWY-5103; PWY-6396; BRANCHED-CHAIN-AA-SYN-PWY; PWY-6389; PWY-5104; ILEUSYN-PWY; PWY-5939;
metacyc_pathway_name L-valine biosynthesis;; L-isoleucine biosynthesis II;; superpathway of L-isoleucine biosynthesis I;; pyruvate fermentation to (R)-acetoin I;; superpathway of L-threonine metabolism;; L-isoleucine biosynthesis III;; superpathway of 2,3-butanediol biosynthesis;; superpathway of branched chain amino acid biosynthesis;; pyruvate fermentation to (S)-acetoin;; L-isoleucine biosynthesis IV;; L-isoleucine biosynthesis I (from threonine);; pyruvate fermentation to (R)-acetoin II;;
metacyc_pathway_type VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; Acetoin-Biosynthesis;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN;; Butanediol-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;;
pfam_acc PF02775; PF00205; PF02776;
pfam_desc Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain;
pfam_id TPP_enzyme_C; TPP_enzyme_M; TPP_enzyme_N;
pfam_target db:Pfam-A.hmm|PF02775.21 evalue:7.4e-44 score:148.4 best_domain_score:146.6 name:TPP_enzyme_C; db:Pfam-A.hmm|PF00205.22 evalue:9.3e-30 score:102.4 best_domain_score:101.4 name:TPP_enzyme_M; db:Pfam-A.hmm|PF02776.18 evalue:6.5e-58 score:194.4 best_domain_score:177.3 name:TPP_enzyme_N;
sprot_desc Acetolactate synthase large subunit;
sprot_id sp|P42463|ILVB_CORGL;
sprot_target db:uniprot_sprot|sp|P42463|ILVB_CORGL 6 536 evalue:5.4e-69 qcov:96.40 identity:32.10;
100408 99761 CDS
ID metaerg.pl|01744
allec_ids 3.1.3.-;
allgo_ids GO:0009507; GO:0009570; GO:0009534; GO:0009535; GO:0016021; GO:0042651; GO:0016787; GO:0046872; GO:0061630; GO:0045454; GO:0010196; GO:0043161; GO:0000209;
allko_ids K03731; K01838; K01194;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246874.1 1 215 evalue:3.7e-91 qcov:100.00 identity:76.30;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6456; PWY-5491; NADPHOS-DEPHOS-PWY; PWY-5083; PWY-882;
metacyc_pathway_name serinol biosynthesis;; diethylphosphate degradation;; NAD phosphorylation and dephosphorylation;; NAD/NADH phosphorylation and dephosphorylation;; L-ascorbate biosynthesis I (L-galactose pathway);;
metacyc_pathway_type Polyamine-Biosynthesis;; Phosphorus-Compounds;; NAD-Metabolism;; NAD-Metabolism;; Ascorbate-Biosynthesis;;
pfam_acc PF13419; PF00702; PF13242;
pfam_desc Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD_2; Hydrolase; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:9.7e-20 score:70.6 best_domain_score:70.4 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:3.7e-14 score:52.8 best_domain_score:48.1 name:Hydrolase; db:Pfam-A.hmm|PF13242.6 evalue:8.1e-06 score:25.1 best_domain_score:23.9 name:Hydrolase_like;
sprot_desc hypothetical protein;
sprot_id sp|Q8VZ10|SOQ1_ARATH;
sprot_target db:uniprot_sprot|sp|Q8VZ10|SOQ1_ARATH 6 183 evalue:6.9e-12 qcov:82.80 identity:29.90;
tigrfam_acc TIGR01509;
tigrfam_desc HAD hydrolase, family IA, variant 3;
tigrfam_mainrole Unknown function;
tigrfam_name HAD-SF-IA-v3;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:1.4e-17 score:63.4 best_domain_score:50.6 name:TIGR01509;
100970 100398 CDS
ID metaerg.pl|01745
allec_ids 2.1.1.171;
allgo_ids GO:0008168; GO:0052913; GO:0003676;
allko_ids K08316;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479031.1 1 183 evalue:6.4e-79 qcov:96.30 identity:81.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF03602; PF05175;
pfam_desc Conserved hypothetical protein 95; Methyltransferase small domain;
pfam_id Cons_hypoth95; MTS;
pfam_target db:Pfam-A.hmm|PF03602.15 evalue:2.4e-47 score:160.2 best_domain_score:160.0 name:Cons_hypoth95; db:Pfam-A.hmm|PF05175.14 evalue:7.2e-06 score:24.9 best_domain_score:24.4 name:MTS;
sprot_desc Ribosomal RNA small subunit methyltransferase D;
sprot_id sp|P0ADY0|RSMD_ECOL6;
sprot_target db:uniprot_sprot|sp|P0ADY0|RSMD_ECOL6 1 187 evalue:5.7e-18 qcov:98.40 identity:34.70;
tigrfam_acc TIGR00095;
tigrfam_desc 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00095;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00095 evalue:1e-40 score:138.6 best_domain_score:138.4 name:TIGR00095;
102169 100967 CDS
ID metaerg.pl|01746
allec_ids 1.18.1.3;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0008860; GO:0050660;
allko_ids K00360; K00372; K00176; K03388; K00369; K00529; K00382; K00362; K00363; K00266; K01008; K03885; K00356;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796090.1 1 400 evalue:5.7e-178 qcov:100.00 identity:80.50;
kegg_pathway_id 00450; 00910; 00251; 00252; 00620; 00790; 00190; 00360; 00071; 00280; 00010; 00720; 00260; 00020;
kegg_pathway_name Selenoamino acid metabolism; Nitrogen metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Folate biosynthesis; Oxidative phosphorylation; Phenylalanine metabolism; Fatty acid metabolism; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Reductive carboxylate cycle (CO2 fixation); Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF02737; PF01262; PF01266; PF00890; PF01134; PF13241; PF13450; PF00070; PF07992; PF14759; PF03721;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Alanine dehydrogenase/PNT, C-terminal domain; FAD dependent oxidoreductase; FAD binding domain; Glucose inhibited division protein A; Putative NAD(P)-binding; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Reductase C-terminal; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain;
pfam_id 3HCDH_N; AlaDh_PNT_C; DAO; FAD_binding_2; GIDA; NAD_binding_7; NAD_binding_8; Pyr_redox; Pyr_redox_2; Reductase_C; UDPG_MGDP_dh_N;
pfam_target db:Pfam-A.hmm|PF02737.18 evalue:4e-05 score:22.8 best_domain_score:20.2 name:3HCDH_N; db:Pfam-A.hmm|PF01262.21 evalue:2e-05 score:23.3 best_domain_score:23.3 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF01266.24 evalue:3.2e-07 score:29.5 best_domain_score:29.5 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:7.7e-05 score:21.2 best_domain_score:21.2 name:FAD_binding_2; db:Pfam-A.hmm|PF01134.22 evalue:1.7e-05 score:23.3 best_domain_score:21.3 name:GIDA; db:Pfam-A.hmm|PF13241.6 evalue:2.4e-05 score:23.9 best_domain_score:19.5 name:NAD_binding_7; db:Pfam-A.hmm|PF13450.6 evalue:2.3e-07 score:30.2 best_domain_score:25.9 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:1e-18 score:66.9 best_domain_score:55.7 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:4.7e-56 score:189.4 best_domain_score:189.2 name:Pyr_redox_2; db:Pfam-A.hmm|PF14759.6 evalue:5.4e-28 score:96.6 best_domain_score:95.4 name:Reductase_C; db:Pfam-A.hmm|PF03721.14 evalue:1.9e-05 score:23.6 best_domain_score:19.7 name:UDPG_MGDP_dh_N;
sprot_desc Chloroacetanilide N-alkylformylase, ferredoxin reductase component;
sprot_id sp|X5CY81|CNDC1_SPHSD;
sprot_target db:uniprot_sprot|sp|X5CY81|CNDC1_SPHSD 4 400 evalue:3.6e-78 qcov:99.20 identity:41.90;
102252 102740 CDS
ID metaerg.pl|01747
allec_ids 1.11.1.15;
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0009570; GO:0005737; GO:0008379; GO:0045454; GO:0034599; GO:0042744;
allko_ids K00540; K00428; K03386; K11187; K14171;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469875.1 1 162 evalue:3.1e-74 qcov:100.00 identity:86.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:2.3e-12 score:46.1 best_domain_score:46.0 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:4.4e-32 score:110.0 best_domain_score:109.9 name:Redoxin;
sprot_desc Peroxiredoxin-2E-2, chloroplastic;
sprot_id sp|Q7F8S5|PR2E2_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q7F8S5|PR2E2_ORYSJ 3 162 evalue:1.8e-36 qcov:98.80 identity:52.40;
102740 103921 CDS
ID metaerg.pl|01748
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469874.1 1 393 evalue:2.7e-193 qcov:100.00 identity:80.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF13480; PF04339;
pfam_desc Acetyltransferase (GNAT) domain; Peptidogalycan biosysnthesis/recognition;
pfam_id Acetyltransf_6; FemAB_like;
pfam_target db:Pfam-A.hmm|PF13480.7 evalue:1.8e-10 score:40.4 best_domain_score:40.4 name:Acetyltransf_6; db:Pfam-A.hmm|PF04339.12 evalue:5.5e-153 score:508.7 best_domain_score:508.5 name:FemAB_like;
103914 104201 CDS
ID metaerg.pl|01749
allec_ids 4.2.1.96;
allgo_ids GO:0006729; GO:0008124;
allko_ids K01724;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469953.1 1 93 evalue:1.8e-34 qcov:97.90 identity:74.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PHENYLALANINE-DEG1-PWY;
metacyc_pathway_name L-phenylalanine degradation I (aerobic);;
metacyc_pathway_type PHENYLALANINE-DEG;;
pfam_acc PF01329;
pfam_desc Pterin 4 alpha carbinolamine dehydratase;
pfam_id Pterin_4a;
pfam_target db:Pfam-A.hmm|PF01329.19 evalue:9e-29 score:98.7 best_domain_score:98.6 name:Pterin_4a;
sprot_desc Putative pterin-4-alpha-carbinolamine dehydratase;
sprot_id sp|Q28VA7|PHS_JANSC;
sprot_target db:uniprot_sprot|sp|Q28VA7|PHS_JANSC 1 94 evalue:3.8e-31 qcov:98.90 identity:69.10;
104256 105425 CDS
ID metaerg.pl|01750
allec_ids 2.1.1.173;
allgo_ids GO:0005737; GO:0052915; GO:0003723; GO:0016423; GO:0030488;
allko_ids K07444;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469952.1 23 389 evalue:4.2e-162 qcov:94.30 identity:76.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01170;
pfam_desc Putative RNA methylase family UPF0020;
pfam_id UPF0020;
pfam_target db:Pfam-A.hmm|PF01170.18 evalue:1.8e-35 score:121.6 best_domain_score:121.2 name:UPF0020;
sprot_desc Ribosomal RNA large subunit methyltransferase L;
sprot_id sp|Q9K0V4|RLML_NEIMB;
sprot_target db:uniprot_sprot|sp|Q9K0V4|RLML_NEIMB 25 384 evalue:1.5e-52 qcov:92.50 identity:35.60;
105649 105422 CDS
ID metaerg.pl|01751
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479045.1 1 72 evalue:3.0e-24 qcov:96.00 identity:79.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF11003;
pfam_desc Protein of unknown function (DUF2842);
pfam_id DUF2842;
pfam_target db:Pfam-A.hmm|PF11003.8 evalue:1.3e-18 score:66.3 best_domain_score:66.1 name:DUF2842;
tm_num 2;
105649 105422 transmembrane_helix
ID metaerg.pl|01752
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i105455-105523o105533-105592i;
106941 105649 CDS
ID metaerg.pl|01753
allec_ids 6.3.4.4;
allgo_ids GO:0004019; GO:0005525; GO:0006164; GO:0005737; GO:0000287; GO:0044208;
allko_ids K01939;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469872.1 1 430 evalue:3.5e-242 qcov:100.00 identity:95.10;
kegg_pathway_id 00252; 00230;
kegg_pathway_name Alanine and aspartate metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id DENOVOPURINE2-PWY; P121-PWY; PWY-841; PWY-6126; PRPP-PWY;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; adenine and adenosine salvage I;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Adenine-Adenosine-Salvage;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF00709;
pfam_desc Adenylosuccinate synthetase;
pfam_id Adenylsucc_synt;
pfam_target db:Pfam-A.hmm|PF00709.21 evalue:9.7e-172 score:570.8 best_domain_score:570.6 name:Adenylsucc_synt;
sprot_desc Adenylosuccinate synthetase;
sprot_id sp|Q5LTU4|PURA_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LTU4|PURA_RUEPO 1 430 evalue:1.3e-235 qcov:100.00 identity:91.60;
tigrfam_acc TIGR00184;
tigrfam_desc adenylosuccinate synthase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purA;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00184 evalue:1.1e-158 score:527.7 best_domain_score:527.5 name:TIGR00184;
107110 107472 CDS
ID metaerg.pl|01754
allgo_ids GO:0009306; GO:0015450; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796097.1 1 120 evalue:1.2e-43 qcov:100.00 identity:87.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF03840;
pfam_desc Preprotein translocase SecG subunit;
pfam_id SecG;
pfam_target db:Pfam-A.hmm|PF03840.14 evalue:1.4e-16 score:59.6 best_domain_score:59.1 name:SecG;
tigrfam_acc TIGR00810;
tigrfam_desc preprotein translocase, SecG subunit;
tigrfam_mainrole Protein fate;
tigrfam_name secG;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00810 evalue:9e-18 score:63.3 best_domain_score:62.9 name:TIGR00810;
tm_num 2;
107110 107472 transmembrane_helix
ID metaerg.pl|01755
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i107122-107175o107263-107322i;
107625 109268 CDS
ID metaerg.pl|01756
allec_ids 6.3.4.2;
allgo_ids GO:0003883; GO:0006221; GO:0005524; GO:0046872; GO:0044210; GO:0006541;
allko_ids K01937;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796098.1 1 547 evalue:3.0e-307 qcov:100.00 identity:94.90;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY0-162; PWY-5687; PRPP-PWY;
metacyc_pathway_name superpathway of pyrimidine ribonucleotides de novo biosynthesis;; ; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ; Super-Pathways;;
pfam_acc PF06418; PF00117; PF07722;
pfam_desc CTP synthase N-terminus; Glutamine amidotransferase class-I; Peptidase C26;
pfam_id CTP_synth_N; GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF06418.14 evalue:3.1e-116 score:386.6 best_domain_score:385.8 name:CTP_synth_N; db:Pfam-A.hmm|PF00117.28 evalue:1.5e-55 score:187.2 best_domain_score:186.7 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:2.6e-10 score:39.6 best_domain_score:38.6 name:Peptidase_C26;
sprot_desc CTP synthase;
sprot_id sp|Q5LTV0|PYRG_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LTV0|PYRG_RUEPO 1 547 evalue:2.0e-281 qcov:100.00 identity:85.00;
tigrfam_acc TIGR00337;
tigrfam_desc CTP synthase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name PyrG;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00337 evalue:4.3e-221 score:734.2 best_domain_score:734.0 name:TIGR00337;
109332 110021 CDS
ID metaerg.pl|01757
allec_ids 4.4.1.3;
allgo_ids GO:0047869; GO:0046872;
allko_ids K16953;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479041.1 12 225 evalue:2.9e-102 qcov:93.40 identity:86.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6049; PWY-6046;
metacyc_pathway_name superpathway of dimethylsulfoniopropanoate degradation;; dimethylsulfoniopropanoate degradation I (cleavage);;
metacyc_pathway_type Dimethylsulfoniopropionate-Degradation; Super-Pathways;; Dimethylsulfoniopropionate-Degradation;;
pfam_acc PF12973; PF16867;
pfam_desc ChrR Cupin-like domain; Dimethlysulfonioproprionate lyase;
pfam_id Cupin_7; DMSP_lyase;
pfam_target db:Pfam-A.hmm|PF12973.7 evalue:2.3e-07 score:29.9 best_domain_score:28.8 name:Cupin_7; db:Pfam-A.hmm|PF16867.5 evalue:5.8e-34 score:116.3 best_domain_score:115.9 name:DMSP_lyase;
sprot_desc Putative dimethlysulfonioproprionate lyase DddL;
sprot_id sp|Q3J6L0|DDDL_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J6L0|DDDL_RHOS4 13 227 evalue:7.8e-54 qcov:93.90 identity:48.80;
110085 110549 CDS
ID metaerg.pl|01758
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796102.1 1 154 evalue:1.2e-70 qcov:100.00 identity:87.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01042; PF14588;
pfam_desc Endoribonuclease L-PSP; YjgF/chorismate_mutase-like, putative endoribonuclease;
pfam_id Ribonuc_L-PSP; YjgF_endoribonc;
pfam_target db:Pfam-A.hmm|PF01042.21 evalue:1.3e-20 score:72.8 best_domain_score:72.6 name:Ribonuc_L-PSP; db:Pfam-A.hmm|PF14588.6 evalue:6.7e-37 score:126.1 best_domain_score:126.0 name:YjgF_endoribonc;
111246 110602 CDS
ID metaerg.pl|01759
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469867.1 5 204 evalue:8.8e-77 qcov:93.50 identity:75.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF14246; PF00440;
pfam_desc AefR-like transcriptional repressor, C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_7; TetR_N;
pfam_target db:Pfam-A.hmm|PF14246.6 evalue:3.3e-38 score:129.6 best_domain_score:128.7 name:TetR_C_7; db:Pfam-A.hmm|PF00440.23 evalue:2.6e-17 score:61.6 best_domain_score:59.3 name:TetR_N;
111345 112274 CDS
ID metaerg.pl|01760
allgo_ids GO:0016021; GO:0055085; GO:0005886;
allko_ids K07088;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469866.1 1 309 evalue:4.1e-128 qcov:100.00 identity:81.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF03547;
pfam_desc Membrane transport protein;
pfam_id Mem_trans;
pfam_target db:Pfam-A.hmm|PF03547.18 evalue:3.5e-32 score:110.5 best_domain_score:61.1 name:Mem_trans;
sprot_desc Putative malonate transporter;
sprot_id sp|P56949|MDCF_RHIME;
sprot_target db:uniprot_sprot|sp|P56949|MDCF_RHIME 1 299 evalue:1.3e-22 qcov:96.80 identity:30.50;
tm_num 10;
111345 112274 transmembrane_helix
ID metaerg.pl|01761
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology o111354-111422i111456-111515o111543-111602i111639-111707o111720-111788i111825-111893o111921-111989i112026-112094o112107-112175i112194-112262o;
112318 113148 CDS
ID metaerg.pl|01762
allec_ids 3.1.2.12;
allgo_ids GO:0005576; GO:0016787; GO:0052689; GO:0018738; GO:0046294;
allko_ids K01070;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479089.1 1 275 evalue:4.1e-135 qcov:99.60 identity:83.60;
kegg_pathway_id 00680;
kegg_pathway_name Methane metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metabolic_acc TIGR02821;
metabolic_process compound:C1 compounds;process:Formaldehyde oxidation;gene:S-formylglutathione hydrolase;;
metabolic_target db:metabolic.hmm|TIGR02821 evalue:1.6e-125 score:417.4 best_domain_score:417.2 name:TIGR02821;
metacyc_pathway_id PWY-1801; PWY-1882;
metacyc_pathway_name formaldehyde oxidation II (glutathione-dependent);; superpathway of C1 compounds oxidation to CO2;;
metacyc_pathway_type Formaldehyde-Oxidation;; C1-COMPOUNDS; Super-Pathways;;
pfam_acc PF00756; PF10503; PF00326;
pfam_desc Putative esterase; Esterase PHB depolymerase; Prolyl oligopeptidase family;
pfam_id Esterase; Esterase_phd; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00756.20 evalue:3.8e-56 score:189.7 best_domain_score:189.5 name:Esterase; db:Pfam-A.hmm|PF10503.9 evalue:2.7e-12 score:45.9 best_domain_score:24.6 name:Esterase_phd; db:Pfam-A.hmm|PF00326.21 evalue:4.5e-06 score:25.5 best_domain_score:24.8 name:Peptidase_S9;
sprot_desc S-formylglutathione hydrolase;
sprot_id sp|A1AXZ2|SFGH_PARDP;
sprot_target db:uniprot_sprot|sp|A1AXZ2|SFGH_PARDP 2 274 evalue:7.1e-118 qcov:98.90 identity:72.90;
tigrfam_acc TIGR02821;
tigrfam_desc S-formylglutathione hydrolase;
tigrfam_mainrole Cellular processes;
tigrfam_name fghA_ester_D;
tigrfam_sub1role Detoxification;
tigrfam_target db:TIGRFAMs.hmm|TIGR02821 evalue:1.6e-125 score:417.4 best_domain_score:417.2 name:TIGR02821;
113191 114123 CDS
ID metaerg.pl|01763
allec_ids 1.5.1.49;
allgo_ids GO:0016491;
allko_ids K01750;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796107.1 1 302 evalue:4.9e-113 qcov:97.40 identity:66.60;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF02423; PF01488;
pfam_desc Ornithine cyclodeaminase/mu-crystallin family; Shikimate / quinate 5-dehydrogenase;
pfam_id OCD_Mu_crystall; Shikimate_DH;
pfam_target db:Pfam-A.hmm|PF02423.15 evalue:6.4e-53 score:179.0 best_domain_score:178.7 name:OCD_Mu_crystall; db:Pfam-A.hmm|PF01488.20 evalue:2e-08 score:33.6 best_domain_score:33.0 name:Shikimate_DH;
sprot_desc Delta(1)-pyrroline-2-carboxylate reductase;
sprot_id sp|A1B196|PY2CR_PARDP;
sprot_target db:uniprot_sprot|sp|A1B196|PY2CR_PARDP 3 298 evalue:4.0e-77 qcov:95.50 identity:50.80;
114178 114486 CDS
ID metaerg.pl|01764
allgo_ids GO:0003677; GO:0005622; GO:0006355; GO:0005737; GO:0009295;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071471012.1 2 102 evalue:1.3e-33 qcov:99.00 identity:71.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00816;
pfam_desc H-NS histone family;
pfam_id Histone_HNS;
pfam_target db:Pfam-A.hmm|PF00816.21 evalue:3.4e-24 score:84.7 best_domain_score:84.6 name:Histone_HNS;
sprot_desc Trans-acting regulatory protein HvrA;
sprot_id sp|P42505|HVRA_RHOCA;
sprot_target db:uniprot_sprot|sp|P42505|HVRA_RHOCA 1 102 evalue:4.9e-24 qcov:100.00 identity:54.90;
114546 115388 CDS
ID metaerg.pl|01765
allgo_ids GO:0016021; GO:0005886; GO:0004527;
allko_ids K07058;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071471013.1 1 279 evalue:8.7e-109 qcov:99.60 identity:73.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF03631;
pfam_desc Virulence factor BrkB;
pfam_id Virul_fac_BrkB;
pfam_target db:Pfam-A.hmm|PF03631.15 evalue:1.2e-48 score:165.3 best_domain_score:165.1 name:Virul_fac_BrkB;
sprot_desc Putative ribonuclease-like protein YfkH;
sprot_id sp|O34437|YFKH_BACSU;
sprot_target db:uniprot_sprot|sp|O34437|YFKH_BACSU 10 251 evalue:1.5e-19 qcov:86.40 identity:33.10;
tigrfam_acc TIGR00765;
tigrfam_desc YihY family inner membrane protein;
tigrfam_mainrole Unknown function;
tigrfam_name yihY_not_rbn;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00765 evalue:9.6e-28 score:96.8 best_domain_score:96.7 name:TIGR00765;
tm_num 6;
114546 115388 transmembrane_helix
ID metaerg.pl|01766
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i114582-114650o114762-114815i114894-114962o115020-115073i115110-115178o115221-115289i;
116157 115345 CDS
ID metaerg.pl|01767
allec_ids 3.4.11.18;
allgo_ids GO:0046872; GO:0070006; GO:0070084;
allko_ids K01265;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481506.1 1 269 evalue:1.6e-139 qcov:99.60 identity:89.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00557;
pfam_desc Metallopeptidase family M24;
pfam_id Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF00557.24 evalue:1.9e-46 score:157.7 best_domain_score:157.5 name:Peptidase_M24;
sprot_desc Methionine aminopeptidase;
sprot_id sp|Q9ZCD3|MAP1_RICPR;
sprot_target db:uniprot_sprot|sp|Q9ZCD3|MAP1_RICPR 14 269 evalue:4.4e-80 qcov:94.80 identity:56.40;
tigrfam_acc TIGR00500;
tigrfam_desc methionine aminopeptidase, type I;
tigrfam_mainrole Protein fate;
tigrfam_name met_pdase_I;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00500 evalue:1.6e-87 score:292.3 best_domain_score:292.1 name:TIGR00500;
116352 119174 CDS
ID metaerg.pl|01768
allgo_ids GO:0005515;
allko_ids K11711; K07642; K02484; K11356; K11640; K04486; K07708; K07645; K07677; K07704; K10909; K08282; K01937; K07643; K11231; K02491; K07654; K07777; K00936; K07649; K07682; K03407; K07637; K07646; K07641; K13598; K07673; K01120; K07639; K08475; K07652; K07683; K11354; K07778; K11633; K07768; K02575; K07711; K13533; K02478; K07679; K07648; K07651; K07698; K07718; K01769; K07650; K10681; K07676; K06379; K13532; K07709; K07644; K11383; K02486; K12767; K14509; K07769; K04757; K11357; K11629; K10125; K02342; K07647; K07680; K13040; K10942; K07717; K07675; K02668; K03388; K08479; K07674; K10916; K02489; K07697; K07716; K07710; K07640; K01768; K07656; K14489; K02482; K08801; K02480; K07638; K07653; K07636; K13587; K02030; K11527; K07678; K10715;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796110.1 11 939 evalue:4.9e-249 qcov:98.80 identity:50.70;
kegg_pathway_id 00240; 03030; 00230; 05111; 00340; 00790; 03090; 02020; 04011;
kegg_pathway_name Pyrimidine metabolism; DNA replication; Purine metabolism; Vibrio cholerae pathogenic cycle; Histidine metabolism; Folate biosynthesis; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01590; PF02518; PF00989; PF08448; PF13426; PF00072;
pfam_desc GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; PAS fold; PAS domain; Response regulator receiver domain;
pfam_id GAF; HATPase_c; PAS; PAS_4; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:5.3e-06 score:26.3 best_domain_score:24.7 name:GAF; db:Pfam-A.hmm|PF02518.26 evalue:6.4e-17 score:61.3 best_domain_score:60.2 name:HATPase_c; db:Pfam-A.hmm|PF00989.25 evalue:1.9e-14 score:52.9 best_domain_score:38.4 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:1.2e-24 score:85.9 best_domain_score:38.8 name:PAS_4; db:Pfam-A.hmm|PF13426.7 evalue:8.7e-16 score:57.3 best_domain_score:35.2 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:3.5e-12 score:45.7 best_domain_score:44.5 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:5.9e-15 score:54.7 best_domain_score:29.5 name:TIGR00229;
119196 119834 CDS
ID metaerg.pl|01769
allgo_ids GO:0006355; GO:0003677; GO:0009405; GO:0000160;
allko_ids K11231; K07677; K07708; K08282; K02484; K11356; K11640; K07642; K07679; K07648; K07651; K07778; K07711; K07646; K07641; K07673; K07639; K07652; K07654; K07682; K03407; K07647; K07717; K07675; K02486; K11383; K12767; K04757; K11357; K10125; K07709; K07644; K07676; K06379; K02030; K07678; K10715; K02482; K02480; K07653; K07636; K02489; K07716; K07710; K02668; K03388; K10916; K07690;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796121.1 1 211 evalue:3.0e-69 qcov:99.50 identity:69.30;
kegg_pathway_id 05111; 00790; 03090; 04011; 02020;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Folate biosynthesis; Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00196; PF00072; PF08281;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain; Sigma-70, region 4;
pfam_id GerE; Response_reg; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:1.6e-19 score:68.4 best_domain_score:67.7 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:4e-22 score:77.7 best_domain_score:77.3 name:Response_reg; db:Pfam-A.hmm|PF08281.12 evalue:2e-07 score:29.8 best_domain_score:28.2 name:Sigma70_r4_2;
sprot_desc Virulence factors putative positive transcription regulator BvgA;
sprot_id sp|P0A4H3|BVGA_BORBR;
sprot_target db:uniprot_sprot|sp|P0A4H3|BVGA_BORBR 2 211 evalue:1.8e-12 qcov:99.10 identity:26.20;
119962 121002 CDS
ID metaerg.pl|01770
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796111.1 1 346 evalue:6.3e-109 qcov:100.00 identity:60.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF13403;
pfam_desc Hint domain;
pfam_id Hint_2;
pfam_target db:Pfam-A.hmm|PF13403.6 evalue:2.3e-47 score:160.1 best_domain_score:159.1 name:Hint_2;
121189 121809 CDS
ID metaerg.pl|01771
allgo_ids GO:0005622; GO:0019843; GO:0015935; GO:0003735; GO:0006412;
allko_ids K02986;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796112.1 1 206 evalue:1.1e-108 qcov:100.00 identity:96.60;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00163; PF01479;
pfam_desc Ribosomal protein S4/S9 N-terminal domain; S4 domain;
pfam_id Ribosomal_S4; S4;
pfam_target db:Pfam-A.hmm|PF00163.19 evalue:8.2e-26 score:90.0 best_domain_score:89.4 name:Ribosomal_S4; db:Pfam-A.hmm|PF01479.25 evalue:1.6e-20 score:71.8 best_domain_score:70.8 name:S4;
sprot_desc 30S ribosomal protein S4;
sprot_id sp|A1BA23|RS4_PARDP;
sprot_target db:uniprot_sprot|sp|A1BA23|RS4_PARDP 1 206 evalue:1.5e-104 qcov:100.00 identity:89.80;
tigrfam_acc TIGR01017;
tigrfam_desc ribosomal protein uS4;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpsD_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01017 evalue:1.4e-71 score:239.5 best_domain_score:239.3 name:TIGR01017;
126048 122608 CDS
ID metaerg.pl|01772
allec_ids 6.4.1.1;
allgo_ids GO:0005524; GO:0005737; GO:0009374; GO:0046872; GO:0004736; GO:0006094; GO:0006090;
allko_ids K11381; K01954; K01968; K00609; K01958; K01960; K08289; K11540; K01964; K03416; K14541; K01956; K01965; K01571; K11541; K01959; K01457; K01955; K01941; K15037; K01966;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798110.1 1 1146 evalue:0.0e+00 qcov:100.00 identity:90.50;
kegg_pathway_id 00791; 00220; 00252; 00251; 00620; 00330; 00640; 00280; 00670; 00230; 00240; 00020;
kegg_pathway_name Atrazine degradation; Urea cycle and metabolism of amino groups; Alanine and aspartate metabolism; Glutamate metabolism; Pyruvate metabolism; Arginine and proline metabolism; Propanoate metabolism; Valine, leucine and isoleucine degradation; One carbon pool by folate; Purine metabolism; Pyrimidine metabolism; Citrate cycle (TCA cycle);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6142; P42-PWY; PWY-6146; PWY-5750;
metacyc_pathway_name gluconeogenesis II (Methanobacterium thermoautotrophicum);; incomplete reductive TCA cycle;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; itaconate biosynthesis I;;
metacyc_pathway_type Gluconeogenesis; Super-Pathways;; Reductive-TCA-Cycles;; Biosynthesis; Super-Pathways;; Itaconate-Biosynthesis;;
pfam_acc PF02222; PF02785; PF00289; PF00364; PF02786; PF07478; PF00682; PF02436;
pfam_desc ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Biotin-requiring enzyme; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus; HMGL-like; Conserved carboxylase domain;
pfam_id ATP-grasp; Biotin_carb_C; Biotin_carb_N; Biotin_lipoyl; CPSase_L_D2; Dala_Dala_lig_C; HMGL-like; PYC_OADA;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:2e-07 score:30.0 best_domain_score:29.0 name:ATP-grasp; db:Pfam-A.hmm|PF02785.19 evalue:2.7e-32 score:110.3 best_domain_score:108.9 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:4.2e-39 score:132.7 best_domain_score:130.6 name:Biotin_carb_N; db:Pfam-A.hmm|PF00364.22 evalue:1.2e-11 score:43.5 best_domain_score:41.7 name:Biotin_lipoyl; db:Pfam-A.hmm|PF02786.17 evalue:3.1e-70 score:235.2 best_domain_score:235.0 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:1.8e-07 score:30.1 best_domain_score:28.8 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF00682.19 evalue:5.1e-27 score:94.3 best_domain_score:93.3 name:HMGL-like; db:Pfam-A.hmm|PF02436.18 evalue:5.6e-73 score:244.2 best_domain_score:243.4 name:PYC_OADA;
sprot_desc Pyruvate carboxylase;
sprot_id sp|Q9KWU4|PYC_BACSU;
sprot_target db:uniprot_sprot|sp|Q9KWU4|PYC_BACSU 5 1146 evalue:0.0e+00 qcov:99.70 identity:51.70;
tigrfam_acc TIGR01235;
tigrfam_desc pyruvate carboxylase;
tigrfam_mainrole Energy metabolism;
tigrfam_name pyruv_carbox;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01235 evalue:0 score:1755.9 best_domain_score:1755.7 name:TIGR01235;
127301 126138 CDS
ID metaerg.pl|01773
allec_ids 1.1.-.-;
allgo_ids GO:0005737; GO:0016627; GO:0055114; GO:0005886; GO:0010181; GO:0004457; GO:0019516;
allko_ids K00101;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481248.1 1 376 evalue:8.4e-179 qcov:97.20 identity:79.30;
kegg_pathway_id 00620;
kegg_pathway_name Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id GAMMAHEXCHLORDEG-PWY;
metacyc_pathway_name γ-hexachlorocyclohexane degradation;;
metacyc_pathway_type CHLORINATED-COMPOUNDS-DEG;;
pfam_acc PF01180; PF01070;
pfam_desc Dihydroorotate dehydrogenase; FMN-dependent dehydrogenase;
pfam_id DHO_dh; FMN_dh;
pfam_target db:Pfam-A.hmm|PF01180.21 evalue:9.7e-06 score:24.2 best_domain_score:23.5 name:DHO_dh; db:Pfam-A.hmm|PF01070.18 evalue:4.9e-112 score:373.6 best_domain_score:373.4 name:FMN_dh;
sprot_desc L-lactate dehydrogenase;
sprot_id sp|Q4ZY06|LLDD_PSEU2;
sprot_target db:uniprot_sprot|sp|Q4ZY06|LLDD_PSEU2 11 379 evalue:1.0e-61 qcov:95.30 identity:35.30;
127641 127441 CDS
ID metaerg.pl|01774
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
127940 130318 CDS
ID metaerg.pl|01775
allec_ids 3.6.4.12;
allgo_ids GO:0005524; GO:0005737; GO:0004003; GO:0003677; GO:0006281; GO:0006268;
allko_ids K03657;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798113.1 1 792 evalue:0.0e+00 qcov:100.00 identity:91.40;
kegg_pathway_id 03430; 03420;
kegg_pathway_name Mismatch repair; Nucleotide excision repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF13245; PF13604; PF00580; PF13361; PF13538;
pfam_desc AAA domain; AAA domain; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain; UvrD-like helicase C-terminal domain;
pfam_id AAA_19; AAA_30; UvrD-helicase; UvrD_C; UvrD_C_2;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:9.9e-28 score:96.5 best_domain_score:95.2 name:AAA_19; db:Pfam-A.hmm|PF13604.6 evalue:2.5e-08 score:33.1 best_domain_score:19.2 name:AAA_30; db:Pfam-A.hmm|PF00580.21 evalue:4.4e-74 score:249.1 best_domain_score:247.6 name:UvrD-helicase; db:Pfam-A.hmm|PF13361.6 evalue:8.5e-59 score:198.9 best_domain_score:197.1 name:UvrD_C; db:Pfam-A.hmm|PF13538.6 evalue:1.1e-08 score:34.0 best_domain_score:32.0 name:UvrD_C_2;
sprot_desc Probable DNA helicase II homolog;
sprot_id sp|Q4ULN5|UVRD_RICFE;
sprot_target db:uniprot_sprot|sp|Q4ULN5|UVRD_RICFE 22 672 evalue:8.7e-169 qcov:82.20 identity:47.50;
130386 130697 CDS
ID metaerg.pl|01776
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
130906 130694 CDS
ID metaerg.pl|01777
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386474.1 1 67 evalue:3.2e-12 qcov:95.70 identity:62.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF06568;
pfam_desc Domain of unknown function (DUF1127);
pfam_id DUF1127;
pfam_target db:Pfam-A.hmm|PF06568.11 evalue:1.1e-11 score:43.4 best_domain_score:43.0 name:DUF1127;
131229 131528 CDS
ID metaerg.pl|01778
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
131637 132746 CDS
ID metaerg.pl|01779
allgo_ids GO:0005524; GO:0016887; GO:0051536; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798120.1 14 369 evalue:9.5e-172 qcov:96.50 identity:88.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF13614; PF01656; PF01883; PF09140; PF10609;
pfam_desc AAA domain; CobQ/CobB/MinD/ParA nucleotide binding domain; Iron-sulfur cluster assembly protein; ATPase MipZ; NUBPL iron-transfer P-loop NTPase;
pfam_id AAA_31; CbiA; FeS_assembly_P; MipZ; ParA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:6.2e-09 score:35.3 best_domain_score:31.9 name:AAA_31; db:Pfam-A.hmm|PF01656.23 evalue:6.4e-15 score:54.6 best_domain_score:54.0 name:CbiA; db:Pfam-A.hmm|PF01883.19 evalue:1.2e-14 score:53.5 best_domain_score:52.3 name:FeS_assembly_P; db:Pfam-A.hmm|PF09140.11 evalue:2.3e-08 score:32.9 best_domain_score:32.4 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:2.7e-96 score:321.0 best_domain_score:320.7 name:ParA;
sprot_desc Iron-sulfur cluster carrier protein;
sprot_id sp|P72190|APBC_PSEFR;
sprot_target db:uniprot_sprot|sp|P72190|APBC_PSEFR 75 362 evalue:5.1e-71 qcov:78.00 identity:48.30;
133791 133699 tRNA
ID metaerg.pl|01780
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
name tRNA_Arg_ccg;
133978 134967 CDS
ID metaerg.pl|01781
allec_ids 2.1.1.199;
allgo_ids GO:0008168; GO:0005737; GO:0071424; GO:0070475;
allko_ids K03438;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798124.1 1 329 evalue:3.0e-145 qcov:100.00 identity:81.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF08241; PF13649; PF01795;
pfam_desc Methyltransferase domain; Methyltransferase domain; MraW methylase family;
pfam_id Methyltransf_11; Methyltransf_25; Methyltransf_5;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:5.9e-06 score:26.1 best_domain_score:19.8 name:Methyltransf_11; db:Pfam-A.hmm|PF13649.6 evalue:7.8e-07 score:29.0 best_domain_score:24.9 name:Methyltransf_25; db:Pfam-A.hmm|PF01795.19 evalue:4.3e-90 score:301.6 best_domain_score:301.4 name:Methyltransf_5;
sprot_desc Ribosomal RNA small subunit methyltransferase H;
sprot_id sp|A4WQC5|RSMH_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WQC5|RSMH_RHOS5 3 329 evalue:5.1e-123 qcov:99.40 identity:69.10;
tigrfam_acc TIGR00006;
tigrfam_desc 16S rRNA (cytosine(1402)-N(4))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00006;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00006 evalue:1.1e-82 score:277.1 best_domain_score:276.8 name:TIGR00006;
134975 135358 CDS
ID metaerg.pl|01782
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798127.1 1 111 evalue:2.4e-45 qcov:87.40 identity:82.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
sp YES;
134975 135034 signal_peptide
ID metaerg.pl|01783
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
135355 137136 CDS
ID metaerg.pl|01784
allec_ids 3.4.16.4;
allgo_ids GO:0008658; GO:0016021; GO:0005886; GO:0009002; GO:0071555; GO:0000917; GO:0009252; GO:0008360;
allko_ids K05364; K08384; K12556; K03587; K08884;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798130.1 1 593 evalue:3.2e-294 qcov:100.00 identity:88.20;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-5265; PWY-6471; PEPTIDOGLYCANSYN-PWY;
metacyc_pathway_name peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF03717; PF00905;
pfam_desc Penicillin-binding Protein dimerisation domain; Penicillin binding protein transpeptidase domain;
pfam_id PBP_dimer; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF03717.15 evalue:2.4e-14 score:53.3 best_domain_score:52.6 name:PBP_dimer; db:Pfam-A.hmm|PF00905.22 evalue:1.2e-53 score:181.5 best_domain_score:181.1 name:Transpeptidase;
sprot_desc Probable peptidoglycan D,D-transpeptidase FtsI;
sprot_id sp|B8H0A0|FTSI_CAUVN;
sprot_target db:uniprot_sprot|sp|B8H0A0|FTSI_CAUVN 35 578 evalue:4.9e-76 qcov:91.70 identity:33.10;
tm_num 1;
135355 137136 transmembrane_helix
ID metaerg.pl|01785
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i135496-135564o;
137197 138681 CDS
ID metaerg.pl|01786
allec_ids 6.3.2.13;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0000287; GO:0008765; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01928; K01924; K01929; K01925; K05362;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799202.1 5 494 evalue:3.9e-245 qcov:99.20 identity:90.00;
kegg_pathway_id 00550; 00471; 00300;
kegg_pathway_name Peptidoglycan biosynthesis; D-Glutamine and D-glutamate metabolism; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PEPTIDOGLYCANSYN-PWY; PWY-6387; PWY-6385;
metacyc_pathway_name peptidoglycan biosynthesis I (meso-diaminopimelate containing);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis III (mycobacteria);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01225; PF02875; PF08245;
pfam_desc Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase; Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF01225.25 evalue:2.1e-12 score:46.4 best_domain_score:44.6 name:Mur_ligase; db:Pfam-A.hmm|PF02875.21 evalue:5.2e-22 score:77.2 best_domain_score:74.2 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:1.1e-51 score:174.8 best_domain_score:174.3 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase;
sprot_id sp|Q9A595|MURE_CAUVC;
sprot_target db:uniprot_sprot|sp|Q9A595|MURE_CAUVC 24 492 evalue:3.3e-118 qcov:94.90 identity:50.00;
tigrfam_acc TIGR01085;
tigrfam_desc UDP-N-acetylmuramyl-tripeptide synthetase;
tigrfam_mainrole Cell envelope;
tigrfam_name murE;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01085 evalue:2.2e-137 score:457.9 best_domain_score:457.7 name:TIGR01085;
138678 140093 CDS
ID metaerg.pl|01787
allec_ids 6.3.2.10;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0047480; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01925; K01929; K01928;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798132.1 1 468 evalue:2.3e-202 qcov:99.40 identity:79.10;
kegg_pathway_id 00471; 00300; 00550;
kegg_pathway_name D-Glutamine and D-glutamate metabolism; Lysine biosynthesis; Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6387; PWY-5265; PWY-6385; PWY-6470; PWY-6386; PWY-6471; PEPTIDOGLYCANSYN-PWY;
metacyc_pathway_name UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis V (β-lactam resistance);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01225; PF02875; PF08245;
pfam_desc Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase; Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF01225.25 evalue:1.2e-08 score:34.4 best_domain_score:33.1 name:Mur_ligase; db:Pfam-A.hmm|PF02875.21 evalue:2.1e-08 score:33.6 best_domain_score:29.6 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:3.4e-38 score:130.8 best_domain_score:130.4 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;
sprot_id sp|Q92H60|MURF_RICCN;
sprot_target db:uniprot_sprot|sp|Q92H60|MURF_RICCN 3 461 evalue:4.2e-54 qcov:97.50 identity:31.90;
tigrfam_acc TIGR01143;
tigrfam_desc UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murF;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01143 evalue:2.1e-108 score:362.1 best_domain_score:361.9 name:TIGR01143;
140112 141197 CDS
ID metaerg.pl|01788
allec_ids 2.7.8.13;
allgo_ids GO:0008963; GO:0016021; GO:0005886; GO:0051992; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01000;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798135.1 1 361 evalue:7.4e-185 qcov:100.00 identity:93.60;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-6470; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00953;
pfam_desc Glycosyl transferase family 4;
pfam_id Glycos_transf_4;
pfam_target db:Pfam-A.hmm|PF00953.21 evalue:4.1e-35 score:120.3 best_domain_score:120.3 name:Glycos_transf_4;
sprot_desc Phospho-N-acetylmuramoyl-pentapeptide-transferase;
sprot_id sp|A8LSB0|MRAY_DINSH;
sprot_target db:uniprot_sprot|sp|A8LSB0|MRAY_DINSH 1 361 evalue:5.2e-153 qcov:100.00 identity:77.00;
tigrfam_acc TIGR00445;
tigrfam_desc phospho-N-acetylmuramoyl-pentapeptide-transferase;
tigrfam_mainrole Cell envelope;
tigrfam_name mraY;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00445 evalue:2e-123 score:411.1 best_domain_score:410.9 name:TIGR00445;
tm_num 10;
140112 141197 transmembrane_helix
ID metaerg.pl|01789
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology o140169-140228i140334-140393o140403-140456i140514-140582o140625-140693i140712-140780o140808-140876i140895-140963o140976-141044i141126-141185o;
142461 141259 CDS
ID metaerg.pl|01790
allec_ids 2.6.1.1;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0004069;
allko_ids K00842; K00818; K00816; K10907; K14267; K01760; K14155; K00825; K00812; K00841; K14287; K00837; K14264;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798138.1 1 400 evalue:6.2e-217 qcov:100.00 identity:94.80;
kegg_pathway_id 00330; 00220; 00450; 00350; 00300; 00271; 00380; 00400; 00401; 00252; 00251; 00910; 00360; 00710; 00310; 00920; 00272;
kegg_pathway_name Arginine and proline metabolism; Urea cycle and metabolism of amino groups; Selenoamino acid metabolism; Tyrosine metabolism; Lysine biosynthesis; Methionine metabolism; Tryptophan metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Novobiocin biosynthesis; Alanine and aspartate metabolism; Glutamate metabolism; Nitrogen metabolism; Phenylalanine metabolism; Carbon fixation in photosynthetic organisms; Lysine degradation; Sulfur metabolism; Cysteine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-5347; PWY-5345; PWY-3001; P4-PWY; PWY-5328; GLUTDEG-PWY; PWY-5913; ASPARTATE-DEG1-PWY; ASPASN-PWY; PWY-6146; CYSTEINE-DEG-PWY; THRESYN-PWY; MALATE-ASPARTATE-SHUTTLE-PWY; PWY-6318; ASPARTATESYN-PWY; PWY0-781;
metacyc_pathway_name superpathway of L-methionine biosynthesis (transsulfuration);; superpathway of L-methionine biosynthesis (by sulfhydrylation);; superpathway of L-isoleucine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-methionine salvage and degradation;; L-glutamate degradation II;; partial TCA cycle (obligate autotrophs);; L-aspartate degradation I;; superpathway of L-aspartate and L-asparagine biosynthesis;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; L-cysteine degradation I;; superpathway of L-threonine biosynthesis;; L-aspartate degradation II;; L-phenylalanine degradation IV (mammalian, via side chain);; L-aspartate biosynthesis;; aspartate superpathway;;
metacyc_pathway_type Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; METHIONINE-DEG; Super-Pathways;; ASPARTATE-SYN; GLUTAMATE-DEG;; TCA-VARIANTS;; ASPARTATE-DEG;; Amino-Acid-Biosynthesis; Metabolic-Clusters; Super-Pathways;; Biosynthesis; Super-Pathways;; CYSTEINE-DEG;; Super-Pathways; THREONINE-BIOSYNTHESIS;; ASPARTATE-DEG;; PHENYLALANINE-DEG;; ASPARTATE-SYN;; Super-Pathways;;
pfam_acc PF00155; PF01041;
pfam_desc Aminotransferase class I and II; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1e-76 score:257.7 best_domain_score:257.5 name:Aminotran_1_2; db:Pfam-A.hmm|PF01041.17 evalue:3.3e-09 score:35.8 best_domain_score:35.3 name:DegT_DnrJ_EryC1;
sprot_desc Aspartate aminotransferase A;
sprot_id sp|Q02635|AATA_RHIME;
sprot_target db:uniprot_sprot|sp|Q02635|AATA_RHIME 1 400 evalue:3.4e-161 qcov:100.00 identity:69.50;
142552 142953 CDS
ID metaerg.pl|01791
allgo_ids GO:0043565;
allko_ids K00012; K01486; K10907; K14260;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481239.1 1 131 evalue:1.2e-47 qcov:98.50 identity:74.00;
kegg_pathway_id 00520; 00500; 00040; 00230;
kegg_pathway_name Nucleotide sugars metabolism; Starch and sucrose metabolism; Pentose and glucuronate interconversions; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF12844; PF01381; PF13560;
pfam_desc Helix-turn-helix domain; Helix-turn-helix; Helix-turn-helix domain;
pfam_id HTH_19; HTH_3; HTH_31;
pfam_target db:Pfam-A.hmm|PF12844.7 evalue:8.9e-12 score:44.1 best_domain_score:43.7 name:HTH_19; db:Pfam-A.hmm|PF01381.22 evalue:6.6e-12 score:44.5 best_domain_score:44.4 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:1.9e-09 score:37.0 best_domain_score:37.0 name:HTH_31;
142953 143228 CDS
ID metaerg.pl|01792
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481238.1 3 87 evalue:2.3e-26 qcov:93.40 identity:68.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF03937;
pfam_desc Flavinator of succinate dehydrogenase;
pfam_id Sdh5;
pfam_target db:Pfam-A.hmm|PF03937.16 evalue:2.9e-24 score:84.0 best_domain_score:83.8 name:Sdh5;
143303 143800 CDS
ID metaerg.pl|01793
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482195.1 1 165 evalue:9.8e-68 qcov:100.00 identity:73.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF13463; PF12802;
pfam_desc Winged helix DNA-binding domain; MarR family;
pfam_id HTH_27; MarR_2;
pfam_target db:Pfam-A.hmm|PF13463.6 evalue:7e-16 score:57.7 best_domain_score:56.5 name:HTH_27; db:Pfam-A.hmm|PF12802.7 evalue:5.6e-10 score:38.2 best_domain_score:36.8 name:MarR_2;
144982 143963 CDS
ID metaerg.pl|01794
allgo_ids GO:0030288; GO:0006865;
allko_ids K09969;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481234.1 1 339 evalue:1.8e-132 qcov:100.00 identity:69.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00497;
pfam_desc Bacterial extracellular solute-binding proteins, family 3;
pfam_id SBP_bac_3;
pfam_target db:Pfam-A.hmm|PF00497.20 evalue:7.2e-22 score:77.1 best_domain_score:76.8 name:SBP_bac_3;
sp YES;
sprot_desc Glutamate/glutamine/aspartate/asparagine-binding protein BztA;
sprot_id sp|Q52663|BZTA_RHOCB;
sprot_target db:uniprot_sprot|sp|Q52663|BZTA_RHOCB 1 339 evalue:4.8e-108 qcov:100.00 identity:56.60;
143963 144028 signal_peptide
ID metaerg.pl|01795
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
145363 146151 CDS
ID metaerg.pl|01796
allec_ids 2.7.1.50;
allgo_ids GO:0004417; GO:0009228; GO:0005524; GO:0000287; GO:0009229;
allko_ids K00878;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rubellimicrobium;s__Rubellimicrobium thermophilum;
genomedb_acc GCF_000442315.1;
genomedb_target db:genomedb|GCF_000442315.1|WP_021099069.1 1 262 evalue:4.9e-106 qcov:100.00 identity:79.80;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id THISYN-PWY;
metacyc_pathway_name superpathway of thiamine diphosphate biosynthesis I;;
metacyc_pathway_type Super-Pathways; Thiamine-Biosynthesis;;
pfam_acc PF02110;
pfam_desc Hydroxyethylthiazole kinase family;
pfam_id HK;
pfam_target db:Pfam-A.hmm|PF02110.15 evalue:2e-83 score:278.8 best_domain_score:278.6 name:HK;
sp YES;
sprot_desc Hydroxyethylthiazole kinase;
sprot_id sp|A4WQ25|THIM_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WQ25|THIM_RHOS5 1 262 evalue:1.8e-75 qcov:100.00 identity:60.70;
tigrfam_acc TIGR00694;
tigrfam_desc hydroxyethylthiazole kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name thiM;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00694 evalue:9.4e-85 score:283.2 best_domain_score:283.1 name:TIGR00694;
tm_num 1;
145363 145500 signal_peptide
ID metaerg.pl|01797
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
145363 146151 transmembrane_helix
ID metaerg.pl|01798
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology i145423-145491o;
146148 146759 CDS
ID metaerg.pl|01799
allec_ids 2.5.1.3;
allgo_ids GO:0000287; GO:0004789; GO:0009228; GO:0009229;
allko_ids K00788;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rubellimicrobium;s__Rubellimicrobium thermophilum;
genomedb_acc GCF_000442315.1;
genomedb_target db:genomedb|GCF_000442315.1|WP_021099068.1 1 203 evalue:8.9e-71 qcov:100.00 identity:70.00;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id THISYN-PWY; THISYNARA-PWY;
metacyc_pathway_name superpathway of thiamine diphosphate biosynthesis I;; superpathway of thiamine diphosphate biosynthesis III (eukaryotes);;
metacyc_pathway_type Super-Pathways; Thiamine-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;;
pfam_acc PF02581;
pfam_desc Thiamine monophosphate synthase;
pfam_id TMP-TENI;
pfam_target db:Pfam-A.hmm|PF02581.17 evalue:3.5e-51 score:172.3 best_domain_score:172.2 name:TMP-TENI;
sprot_desc Thiamine-phosphate synthase;
sprot_id sp|A6W6A2|THIE_KINRD;
sprot_target db:uniprot_sprot|sp|A6W6A2|THIE_KINRD 5 200 evalue:3.4e-37 qcov:96.60 identity:47.70;
tigrfam_acc TIGR00693;
tigrfam_desc thiamine-phosphate diphosphorylase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name thiE;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00693 evalue:3.7e-51 score:172.4 best_domain_score:172.2 name:TIGR00693;
146756 147556 CDS
ID metaerg.pl|01800
allec_ids 2.7.1.49; 2.7.1.49 2.7.4.7;
allgo_ids GO:0052855; GO:0005829; GO:0005524; GO:0008902; GO:0008972; GO:0016310; GO:0009228; GO:0009229;
allko_ids K00941;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_C;s__Rhodobacter_C vinaykumarii;
genomedb_acc GCF_900156695.1;
genomedb_target db:genomedb|GCF_900156695.1|WP_076363193.1 1 261 evalue:9.5e-97 qcov:98.10 identity:74.70;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id THISYNARA-PWY; THISYN-PWY;
metacyc_pathway_name superpathway of thiamine diphosphate biosynthesis III (eukaryotes);; superpathway of thiamine diphosphate biosynthesis I;;
metacyc_pathway_type Super-Pathways; Thiamine-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;;
pfam_acc PF01256; PF08543;
pfam_desc Carbohydrate kinase; Phosphomethylpyrimidine kinase;
pfam_id Carb_kinase; Phos_pyr_kin;
pfam_target db:Pfam-A.hmm|PF01256.17 evalue:5.8e-05 score:21.9 best_domain_score:21.3 name:Carb_kinase; db:Pfam-A.hmm|PF08543.12 evalue:4.2e-89 score:297.4 best_domain_score:297.2 name:Phos_pyr_kin;
sprot_desc Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;
sprot_id sp|P76422|THID_ECOLI;
sprot_target db:uniprot_sprot|sp|P76422|THID_ECOLI 4 261 evalue:7.7e-61 qcov:97.00 identity:52.70;
tigrfam_acc TIGR00097;
tigrfam_desc hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name HMP-P_kinase;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00097 evalue:3.6e-87 score:291.0 best_domain_score:290.8 name:TIGR00097;
147553 148224 CDS
ID metaerg.pl|01801
allec_ids 2.5.1.3; 2.7.1.49; 2.7.4.7; 3.5.99.2;
allgo_ids GO:0005524; GO:0008902; GO:0000287; GO:0008972; GO:0004789; GO:0009228; GO:0009229;
allko_ids K14153;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072244209.1 1 223 evalue:1.0e-67 qcov:100.00 identity:59.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id THISYN-PWY; THISYNARA-PWY;
metacyc_pathway_name superpathway of thiamine diphosphate biosynthesis I;; superpathway of thiamine diphosphate biosynthesis III (eukaryotes);;
metacyc_pathway_type Super-Pathways; Thiamine-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;;
pfam_acc PF03070;
pfam_desc TENA/THI-4/PQQC family;
pfam_id TENA_THI-4;
pfam_target db:Pfam-A.hmm|PF03070.16 evalue:1e-39 score:135.8 best_domain_score:135.5 name:TENA_THI-4;
sprot_desc Thiamine biosynthesis multifunctional protein ThiED;
sprot_id sp|Q8FTH8|THIED_COREF;
sprot_target db:uniprot_sprot|sp|Q8FTH8|THIED_COREF 3 215 evalue:5.1e-26 qcov:95.50 identity:37.40;
tigrfam_acc TIGR04306;
tigrfam_desc thiaminase II;
tigrfam_name salvage_TenA;
tigrfam_target db:TIGRFAMs.hmm|TIGR04306 evalue:1.2e-39 score:135.4 best_domain_score:135.1 name:TIGR04306;
148929 148225 CDS
ID metaerg.pl|01802
allec_ids 2.1.1.222; 2.1.1.64;
allgo_ids GO:0008168; GO:0008425; GO:0008689; GO:0006744;
allko_ids K03183; K00599; K00568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius tolerans;
genomedb_acc GCF_900109855.1;
genomedb_target db:genomedb|GCF_900109855.1|WP_074787554.1 1 231 evalue:5.8e-106 qcov:98.70 identity:82.30;
kegg_pathway_id 00450; 00626; 00380; 00150; 00340; 00350; 00130;
kegg_pathway_name Selenoamino acid metabolism; Naphthalene and anthracene degradation; Tryptophan metabolism; Androgen and estrogen metabolism; Histidine metabolism; Tyrosine metabolism; Ubiquinone biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id PWY-5855; PWY-5856; PWY-5857;
metacyc_pathway_name ubiquinol-7 biosynthesis (prokaryotic);; ubiquinol-9 biosynthesis (prokaryotic);; ubiquinol-10 biosynthesis (prokaryotic);;
metacyc_pathway_type Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;;
pfam_acc PF02353; PF08241; PF08242; PF13489; PF13649; PF03141; PF13847; PF08003; PF07021; PF05175; PF05401; PF01209;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Putative S-adenosyl-L-methionine-dependent methyltransferase; Methyltransferase domain; Protein of unknown function (DUF1698); Methionine biosynthesis protein MetW; Methyltransferase small domain; Nodulation protein S (NodS); ubiE/COQ5 methyltransferase family;
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_29; Methyltransf_31; Methyltransf_9; MetW; MTS; NodS; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:6.9e-08 score:31.3 best_domain_score:30.9 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:6.5e-27 score:93.3 best_domain_score:92.8 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.2e-16 score:60.5 best_domain_score:60.0 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:1.6e-20 score:72.8 best_domain_score:72.6 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:5.5e-23 score:80.7 best_domain_score:80.3 name:Methyltransf_25; db:Pfam-A.hmm|PF03141.16 evalue:7.6e-05 score:20.7 best_domain_score:20.4 name:Methyltransf_29; db:Pfam-A.hmm|PF13847.6 evalue:1.6e-19 score:69.4 best_domain_score:69.1 name:Methyltransf_31; db:Pfam-A.hmm|PF08003.11 evalue:1.3e-07 score:30.0 best_domain_score:29.5 name:Methyltransf_9; db:Pfam-A.hmm|PF07021.12 evalue:1e-07 score:31.0 best_domain_score:30.4 name:MetW; db:Pfam-A.hmm|PF05175.14 evalue:4.6e-06 score:25.5 best_domain_score:25.0 name:MTS; db:Pfam-A.hmm|PF05401.11 evalue:1.6e-09 score:36.9 best_domain_score:36.5 name:NodS; db:Pfam-A.hmm|PF01209.18 evalue:3.3e-10 score:38.9 best_domain_score:38.7 name:Ubie_methyltran;
sprot_desc Ubiquinone biosynthesis O-methyltransferase;
sprot_id sp|Q3SK91|UBIG_THIDA;
sprot_target db:uniprot_sprot|sp|Q3SK91|UBIG_THIDA 4 208 evalue:1.0e-37 qcov:87.60 identity:40.30;
tigrfam_acc TIGR01983;
tigrfam_desc 3-demethylubiquinone-9 3-O-methyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name UbiG;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR01983 evalue:4.7e-47 score:159.3 best_domain_score:159.1 name:TIGR01983;
149734 148919 CDS
ID metaerg.pl|01803
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481471.1 1 263 evalue:9.9e-118 qcov:97.00 identity:82.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
tm_num 4;
149734 148919 transmembrane_helix
ID metaerg.pl|01804
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
topology o149033-149101i149120-149188o149231-149299i149336-149389o;
150668 149724 CDS
ID metaerg.pl|01805
allec_ids 1.6.3.5;
allgo_ids GO:0016491; GO:0055114; GO:0005576; GO:0016651;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481472.1 6 311 evalue:8.0e-95 qcov:97.50 identity:58.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01593; PF01266; PF00890; PF13450; PF07992;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; DAO; FAD_binding_2; NAD_binding_8; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:1.2e-21 score:76.8 best_domain_score:38.4 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:5.1e-07 score:28.8 best_domain_score:23.3 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:4.1e-07 score:28.7 best_domain_score:27.8 name:FAD_binding_2; db:Pfam-A.hmm|PF13450.6 evalue:1.4e-14 score:53.3 best_domain_score:52.2 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:8.7e-07 score:27.7 best_domain_score:26.9 name:Pyr_redox_2;
sp YES;
sprot_desc Renalase;
sprot_id sp|A7RDN6|RNLS_MOUSE;
sprot_target db:uniprot_sprot|sp|A7RDN6|RNLS_MOUSE 8 264 evalue:5.8e-07 qcov:81.80 identity:24.60;
149724 149795 signal_peptide
ID metaerg.pl|01806
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
150793 151005 CDS
ID metaerg.pl|01807
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087210006.1 3 70 evalue:4.2e-20 qcov:97.10 identity:76.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF10985;
pfam_desc Protein of unknown function (DUF2805);
pfam_id DUF2805;
pfam_target db:Pfam-A.hmm|PF10985.8 evalue:8.6e-16 score:57.3 best_domain_score:57.1 name:DUF2805;
151002 151571 CDS
ID metaerg.pl|01808
allgo_ids GO:0010181;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072244175.1 1 189 evalue:1.0e-65 qcov:100.00 identity:64.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF01243; PF12766;
pfam_desc Pyridoxamine 5'-phosphate oxidase; Pyridoxamine 5'-phosphate oxidase;
pfam_id Putative_PNPOx; Pyridox_oxase_2;
pfam_target db:Pfam-A.hmm|PF01243.20 evalue:1.6e-11 score:43.5 best_domain_score:42.6 name:Putative_PNPOx; db:Pfam-A.hmm|PF12766.7 evalue:6.6e-13 score:48.4 best_domain_score:47.2 name:Pyridox_oxase_2;
151648 152031 CDS
ID metaerg.pl|01809
allec_ids 2.7.13.3;
allgo_ids GO:0006355; GO:0005524; GO:0009881; GO:0004673; GO:0009405; GO:0018298; GO:0050896;
allko_ids K07644; K06379; K10942; K04757; K07710; K03388; K11527; K02482; K07636; K02484; K08282;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479277.1 1 127 evalue:4.4e-52 qcov:100.00 identity:79.50;
kegg_pathway_id 05111; 00790; 02020;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Folate biosynthesis; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00989; PF08447; PF13426;
pfam_desc PAS fold; PAS fold; PAS domain;
pfam_id PAS; PAS_3; PAS_9;
pfam_target db:Pfam-A.hmm|PF00989.25 evalue:2.8e-06 score:26.5 best_domain_score:26.0 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:2.1e-09 score:36.8 best_domain_score:36.4 name:PAS_3; db:Pfam-A.hmm|PF13426.7 evalue:7.2e-15 score:54.4 best_domain_score:53.9 name:PAS_9;
sprot_desc Blue-light-activated histidine kinase;
sprot_id sp|B2SB67|LOVHK_BRUA1;
sprot_target db:uniprot_sprot|sp|B2SB67|LOVHK_BRUA1 22 124 evalue:3.6e-24 qcov:81.10 identity:49.50;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.9e-10 score:40.1 best_domain_score:39.9 name:TIGR00229;
152570 152034 CDS
ID metaerg.pl|01810
allgo_ids GO:0008168;
allko_ids K00568; K03183; K00599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468119.1 1 174 evalue:5.6e-61 qcov:97.80 identity:68.40;
kegg_pathway_id 00150; 00380; 00340; 00130; 00350; 00626; 00450;
kegg_pathway_name Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism; Ubiquinone biosynthesis; Tyrosine metabolism; Naphthalene and anthracene degradation; Selenoamino acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF05219; PF08241; PF08242; PF13489; PF13649; PF13847; PF01209;
pfam_desc DREV methyltransferase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; ubiE/COQ5 methyltransferase family;
pfam_id DREV; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF05219.12 evalue:7.4e-09 score:34.3 best_domain_score:33.9 name:DREV; db:Pfam-A.hmm|PF08241.12 evalue:5.2e-16 score:58.3 best_domain_score:57.2 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:8.6e-15 score:54.5 best_domain_score:53.9 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:2.8e-17 score:62.3 best_domain_score:61.9 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.4e-17 score:63.4 best_domain_score:62.6 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:3.1e-15 score:55.5 best_domain_score:55.4 name:Methyltransf_31; db:Pfam-A.hmm|PF01209.18 evalue:9.3e-06 score:24.4 best_domain_score:23.4 name:Ubie_methyltran;
152832 153812 CDS
ID metaerg.pl|01811
allec_ids 1.2.1.12;
allgo_ids GO:0016620; GO:0055114; GO:0005737; GO:0004365; GO:0051287; GO:0050661; GO:0006006; GO:0006096;
allko_ids K10705; K00134;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798003.1 2 324 evalue:2.1e-146 qcov:99.10 identity:81.40;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
metacyc_pathway_id P461-PWY; PWY-5484; P122-PWY; GLYCOLYSIS-E-D; GLYCOLYSIS; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; P441-PWY; GLUCONEO-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; P185-PWY; P124-PWY; ANAGLYCOLYSIS-PWY; PWY-5464;
metacyc_pathway_name hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; heterolactic fermentation;; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis I (from glucose 6-phosphate);; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; superpathway of N-acetylneuraminate degradation;; gluconeogenesis I;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; formaldehyde assimilation III (dihydroxyacetone cycle);; Bifidobacterium shunt;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; Gluconeogenesis;; Energy-Metabolism; Super-Pathways;; Formaldehyde-Assimilation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:1.6e-40 score:137.6 best_domain_score:136.2 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:5e-27 score:93.4 best_domain_score:92.8 name:Gp_dh_N;
sprot_desc Glyceraldehyde-3-phosphate dehydrogenase;
sprot_id sp|P51009|G3P_XANFL;
sprot_target db:uniprot_sprot|sp|P51009|G3P_XANFL 2 320 evalue:6.7e-75 qcov:97.90 identity:45.60;
153977 154183 CDS
ID metaerg.pl|01812
allgo_ids GO:0003676; GO:0005737; GO:0003677;
allko_ids K03704;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797773.1 1 68 evalue:8.8e-31 qcov:100.00 identity:100.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00313; PF08206;
pfam_desc 'Cold-shock' DNA-binding domain; Ribonuclease B OB domain;
pfam_id CSD; OB_RNB;
pfam_target db:Pfam-A.hmm|PF00313.22 evalue:4.2e-26 score:89.8 best_domain_score:89.7 name:CSD; db:Pfam-A.hmm|PF08206.11 evalue:1.4e-05 score:23.9 best_domain_score:23.4 name:OB_RNB;
sprot_desc Probable cold shock protein y4cH;
sprot_id sp|P55390|Y4CH_SINFN;
sprot_target db:uniprot_sprot|sp|P55390|Y4CH_SINFN 1 65 evalue:1.5e-21 qcov:95.60 identity:77.30;
154331 155110 CDS
ID metaerg.pl|01813
allec_ids 2.4.1.213;
allgo_ids GO:0033828; GO:0051473; GO:0005992;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470476.1 16 256 evalue:2.6e-99 qcov:93.10 identity:72.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF08282; PF05116;
pfam_desc haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase;
pfam_id Hydrolase_3; S6PP;
pfam_target db:Pfam-A.hmm|PF08282.12 evalue:2.1e-19 score:69.5 best_domain_score:49.6 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:1.4e-41 score:141.9 best_domain_score:141.7 name:S6PP;
sprot_desc Glucosylglycerol-phosphate synthase;
sprot_id sp|Q93JY3|GGPS_PSEAG;
sprot_target db:uniprot_sprot|sp|Q93JY3|GGPS_PSEAG 16 244 evalue:7.5e-37 qcov:88.40 identity:40.30;
tigrfam_acc TIGR01484;
tigrfam_desc HAD hydrolase, family IIB;
tigrfam_mainrole Unknown function;
tigrfam_name HAD-SF-IIB;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01484 evalue:1.5e-14 score:53.7 best_domain_score:46.9 name:TIGR01484;
155107 156624 CDS
ID metaerg.pl|01814
allec_ids 2.4.1.213;
allgo_ids GO:0003824; GO:0005992; GO:0005737; GO:0005829; GO:0047260; GO:0033828; GO:0030145; GO:0006974; GO:0016311; GO:0051473; GO:0006970; GO:0070415; GO:0070413;
allko_ids K00697; K01087; K03692;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480361.1 1 505 evalue:2.6e-236 qcov:100.00 identity:79.80;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.330322; 194.833; 0.00650657; 0.421841; 195.592;
pfam_acc PF00982;
pfam_desc Glycosyltransferase family 20;
pfam_id Glyco_transf_20;
pfam_target db:Pfam-A.hmm|PF00982.21 evalue:3.1e-125 score:417.8 best_domain_score:417.6 name:Glyco_transf_20;
sprot_desc Glucosylglycerol-phosphate synthase;
sprot_id sp|P74258|GGPS_SYNY3;
sprot_target db:uniprot_sprot|sp|P74258|GGPS_SYNY3 1 480 evalue:4.3e-129 qcov:95.00 identity:47.70;
tigrfam_acc TIGR02398;
tigrfam_desc glucosylglycerol-phosphate synthase;
tigrfam_name gluc_glyc_Psyn;
tigrfam_target db:TIGRFAMs.hmm|TIGR02398 evalue:5e-180 score:598.4 best_domain_score:598.1 name:TIGR02398;
>Feature NODE_8_length_148846_cov_51.2398
91 167 tRNA
ID metaerg.pl|01815
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
name tRNA_Met_cat;
176 268 tRNA
ID metaerg.pl|01816
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
name tRNA_Ser_tga;
370 717 CDS
ID metaerg.pl|01817
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583054.1 1 115 evalue:4.0e-52 qcov:100.00 identity:87.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01521;
pfam_desc Iron-sulphur cluster biosynthesis;
pfam_id Fe-S_biosyn;
pfam_target db:Pfam-A.hmm|PF01521.20 evalue:3.6e-12 score:45.7 best_domain_score:45.5 name:Fe-S_biosyn;
824 1432 CDS
ID metaerg.pl|01818
allec_ids 1.15.1.1;
allgo_ids GO:0004784; GO:0006801; GO:0046872; GO:0055114;
allko_ids K00518; K04564;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583052.1 1 202 evalue:1.5e-115 qcov:100.00 identity:98.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id DETOX1-PWY;
metacyc_pathway_name superoxide radicals degradation;;
metacyc_pathway_type REACTIVE-OXYGEN-SPECIES-DEGRADATION;;
pfam_acc PF02777; PF00081;
pfam_desc Iron/manganese superoxide dismutases, C-terminal domain; Iron/manganese superoxide dismutases, alpha-hairpin domain;
pfam_id Sod_Fe_C; Sod_Fe_N;
pfam_target db:Pfam-A.hmm|PF02777.18 evalue:2.4e-43 score:145.7 best_domain_score:145.1 name:Sod_Fe_C; db:Pfam-A.hmm|PF00081.22 evalue:2e-32 score:110.7 best_domain_score:110.0 name:Sod_Fe_N;
sprot_desc Superoxide dismutase [Mn];
sprot_id sp|Q9KD10|SODM_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KD10|SODM_BACHD 1 202 evalue:2.9e-92 qcov:100.00 identity:74.80;
1922 4027 CDS
ID metaerg.pl|01819
allgo_ids GO:0008658; GO:0005887; GO:0071972; GO:0071555; GO:0009252; GO:0008360; GO:0046677;
allko_ids K03587; K00687; K12556; K05364; K08384; K08884; K21466;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583050.1 1 701 evalue:0.0e+00 qcov:100.00 identity:95.60;
kegg_pathway_id 00550; 00590;
kegg_pathway_name Peptidoglycan biosynthesis; Arachidonic acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF03717; PF00905;
pfam_desc Penicillin-binding Protein dimerisation domain; Penicillin binding protein transpeptidase domain;
pfam_id PBP_dimer; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF03717.15 evalue:7.9e-38 score:129.8 best_domain_score:128.9 name:PBP_dimer; db:Pfam-A.hmm|PF00905.22 evalue:1.1e-59 score:201.3 best_domain_score:201.0 name:Transpeptidase;
sprot_desc Penicillin-binding protein H;
sprot_id sp|Q796K8|PBPH_BACSU;
sprot_target db:uniprot_sprot|sp|Q796K8|PBPH_BACSU 14 662 evalue:6.0e-113 qcov:92.60 identity:37.60;
tm_num 1;
1922 4027 transmembrane_helix
ID metaerg.pl|01820
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i1958-2026o;
4689 4411 CDS
ID metaerg.pl|01821
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583045.1 1 92 evalue:4.2e-44 qcov:100.00 identity:98.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
5655 5191 CDS
ID metaerg.pl|01822
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583043.1 1 154 evalue:2.4e-76 qcov:100.00 identity:96.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
6001 6564 CDS
ID metaerg.pl|01823
allec_ids 6.3.3.2;
allgo_ids GO:0030272; GO:0005524; GO:0009396; GO:0035999;
allko_ids K01934;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583041.1 1 185 evalue:5.7e-88 qcov:98.90 identity:87.00;
kegg_pathway_id 00670;
kegg_pathway_name One carbon pool by folate;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-2201; PWY-3841;
metacyc_pathway_name folate transformations I;; folate transformations II;;
metacyc_pathway_type Folate-Transformations;; Folate-Transformations;;
pfam_acc PF01812;
pfam_desc 5-formyltetrahydrofolate cyclo-ligase family;
pfam_id 5-FTHF_cyc-lig;
pfam_target db:Pfam-A.hmm|PF01812.20 evalue:7e-42 score:142.6 best_domain_score:142.5 name:5-FTHF_cyc-lig;
sprot_desc hypothetical protein;
sprot_id sp|P54491|YQGN_BACSU;
sprot_target db:uniprot_sprot|sp|P54491|YQGN_BACSU 3 178 evalue:8.1e-33 qcov:94.10 identity:39.80;
tigrfam_acc TIGR02727;
tigrfam_desc 5-formyltetrahydrofolate cyclo-ligase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name MTHFS_bact;
tigrfam_sub1role One-carbon metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR02727 evalue:2.6e-46 score:157.0 best_domain_score:156.8 name:TIGR02727;
6566 7357 CDS
ID metaerg.pl|01824
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583039.1 1 259 evalue:4.6e-112 qcov:98.50 identity:84.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01940;
pfam_desc Integral membrane protein DUF92;
pfam_id DUF92;
pfam_target db:Pfam-A.hmm|PF01940.16 evalue:8.7e-50 score:168.6 best_domain_score:168.3 name:DUF92;
tm_num 4;
6566 7357 transmembrane_helix
ID metaerg.pl|01825
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i6626-6694o6842-6910i7085-7153o7283-7351i;
7448 8404 CDS
ID metaerg.pl|01826
allec_ids 1.1.1.27;
allgo_ids GO:0016616; GO:0055114; GO:0005737; GO:0004459; GO:0006096;
allko_ids K00016; K00025; K00026; K00024;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583037.1 1 318 evalue:7.9e-175 qcov:100.00 identity:96.50;
kegg_pathway_id 00272; 00020; 00720; 00010; 00710; 00630; 00640; 00620;
kegg_pathway_name Cysteine metabolism; Citrate cycle (TCA cycle); Reductive carboxylate cycle (CO2 fixation); Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Glyoxylate and dicarboxylate metabolism; Propanoate metabolism; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id P124-PWY; ANAEROFRUCAT-PWY; PWY-3801; PWY-5481; P461-PWY; P41-PWY; PWY-5100; P122-PWY;
metacyc_pathway_name Bifidobacterium shunt;; homolactic fermentation;; sucrose degradation II (sucrose synthase);; pyruvate fermentation to (S)-lactate;; hexitol fermentation to lactate, formate, ethanol and acetate;; pyruvate fermentation to acetate and (S)-lactate I;; pyruvate fermentation to acetate and lactate II;; heterolactic fermentation;;
metacyc_pathway_type Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Fermentation-to-Lactate; Super-Pathways;; SUCROSE-DEG;; Pyruvate-Lactate-Fermentation;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;;
pfam_acc PF02866; PF00056;
pfam_desc lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain;
pfam_id Ldh_1_C; Ldh_1_N;
pfam_target db:Pfam-A.hmm|PF02866.18 evalue:4.9e-35 score:120.1 best_domain_score:119.3 name:Ldh_1_C; db:Pfam-A.hmm|PF00056.23 evalue:6.4e-48 score:161.7 best_domain_score:160.9 name:Ldh_1_N;
sp YES;
sprot_desc L-lactate dehydrogenase 1;
sprot_id sp|P14561|LDH1_BACPS;
sprot_target db:uniprot_sprot|sp|P14561|LDH1_BACPS 9 316 evalue:1.4e-117 qcov:96.90 identity:66.30;
tigrfam_acc TIGR01771;
tigrfam_desc L-lactate dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name L-LDH-NAD;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01771 evalue:8.6e-130 score:431.6 best_domain_score:431.4 name:TIGR01771;
7448 7516 signal_peptide
ID metaerg.pl|01827
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
8518 10116 CDS
ID metaerg.pl|01828
allec_ids 3.4.21.105;
allgo_ids GO:0004252; GO:0016021; GO:0005886;
allko_ids K01802; K05864; K08884; K09571; K19225;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583035.1 1 532 evalue:6.2e-289 qcov:100.00 identity:96.60;
kegg_pathway_id 04020; 05012;
kegg_pathway_name Calcium signaling pathway; Parkinson's disease;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF12895; PF01694; PF00515; PF13374; PF13424; PF13431; PF14559; PF07719; PF13181;
pfam_desc Anaphase-promoting complex, cyclosome, subunit 3; Rhomboid family; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id ANAPC3; Rhomboid; TPR_1; TPR_10; TPR_12; TPR_17; TPR_19; TPR_2; TPR_8;
pfam_target db:Pfam-A.hmm|PF12895.7 evalue:2.5e-07 score:30.0 best_domain_score:23.3 name:ANAPC3; db:Pfam-A.hmm|PF01694.22 evalue:5.1e-37 score:126.4 best_domain_score:126.4 name:Rhomboid; db:Pfam-A.hmm|PF00515.28 evalue:1.4e-10 score:39.8 best_domain_score:32.5 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:9.2e-07 score:27.8 best_domain_score:23.1 name:TPR_10; db:Pfam-A.hmm|PF13424.6 evalue:4.7e-09 score:35.7 best_domain_score:29.5 name:TPR_12; db:Pfam-A.hmm|PF13431.6 evalue:2e-06 score:27.1 best_domain_score:18.5 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:7.1e-07 score:28.9 best_domain_score:18.7 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:3.4e-10 score:38.5 best_domain_score:30.3 name:TPR_2; db:Pfam-A.hmm|PF13181.6 evalue:1.4e-08 score:33.5 best_domain_score:21.2 name:TPR_8;
sprot_desc Rhomboid protease GluP;
sprot_id sp|P54493|GLUP_BACSU;
sprot_target db:uniprot_sprot|sp|P54493|GLUP_BACSU 7 497 evalue:5.3e-61 qcov:92.30 identity:34.00;
tm_num 7;
8518 10116 transmembrane_helix
ID metaerg.pl|01829
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i9067-9135o9238-9306i9325-9393o9403-9471i9490-9558o9568-9627i9652-9705o;
10539 10138 CDS
ID metaerg.pl|01830
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583032.1 1 133 evalue:1.3e-67 qcov:100.00 identity:97.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF07997;
pfam_desc Protein of unknown function (DUF1694);
pfam_id DUF1694;
pfam_target db:Pfam-A.hmm|PF07997.11 evalue:2e-35 score:120.6 best_domain_score:120.4 name:DUF1694;
10706 10918 CDS
ID metaerg.pl|01831
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583030.1 2 69 evalue:3.9e-26 qcov:97.10 identity:92.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF06014;
pfam_desc Bacterial protein of unknown function (DUF910);
pfam_id DUF910;
pfam_target db:Pfam-A.hmm|PF06014.11 evalue:7.2e-15 score:54.0 best_domain_score:53.7 name:DUF910;
11333 12577 CDS
ID metaerg.pl|01832
allec_ids 2.7.1.2;
allgo_ids GO:0005737; GO:0005524; GO:0004340; GO:0006096;
allko_ids K16018; K00845;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583028.1 94 414 evalue:2.6e-170 qcov:77.50 identity:96.30;
kegg_pathway_id 00010; 00500; 00521; 00052;
kegg_pathway_name Glycolysis / Gluconeogenesis; Starch and sucrose metabolism; Streptomycin biosynthesis; Galactose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id GLYCOCAT-PWY; PWY-5661; P122-PWY; ANAGLYCOLYSIS-PWY; TREDEGLOW-PWY; P124-PWY; PWY-2722; PWY0-1182; ANAEROFRUCAT-PWY;
metacyc_pathway_name glycogen degradation I;; GDP-glucose biosynthesis;; heterolactic fermentation;; glycolysis III (from glucose);; trehalose degradation I (low osmolarity);; Bifidobacterium shunt;; trehalose degradation IV;; trehalose degradation II (cytosolic);; homolactic fermentation;;
metacyc_pathway_type Glycan-Degradation; Glycogen-Degradation;; GDP-Sugar-Biosynthesis;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; GLYCOLYSIS-VARIANTS;; Trehalose-Degradation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Trehalose-Degradation;; Trehalose-Degradation;; Fermentation-to-Lactate; Super-Pathways;;
pfam_acc PF01869; PF00480;
pfam_desc BadF/BadG/BcrA/BcrD ATPase family; ROK family;
pfam_id BcrAD_BadFG; ROK;
pfam_target db:Pfam-A.hmm|PF01869.20 evalue:1.1e-08 score:34.1 best_domain_score:27.6 name:BcrAD_BadFG; db:Pfam-A.hmm|PF00480.20 evalue:7.6e-75 score:251.3 best_domain_score:251.0 name:ROK;
sprot_desc Glucokinase;
sprot_id sp|Q9KCZ4|GLK_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KCZ4|GLK_BACHD 94 407 evalue:1.3e-94 qcov:75.80 identity:54.10;
tigrfam_acc TIGR00744;
tigrfam_desc ROK family protein (putative glucokinase);
tigrfam_mainrole Unknown function;
tigrfam_name ROK_glcA_fam;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00744 evalue:1.8e-102 score:342.0 best_domain_score:341.8 name:TIGR00744;
12581 13099 CDS
ID metaerg.pl|01833
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583026.1 1 172 evalue:2.8e-89 qcov:100.00 identity:93.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
sp YES;
tm_num 1;
12581 12673 signal_peptide
ID metaerg.pl|01834
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
12581 13099 transmembrane_helix
ID metaerg.pl|01835
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i12599-12658o;
13137 13802 CDS
ID metaerg.pl|01836
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583024.1 1 216 evalue:2.5e-90 qcov:97.70 identity:79.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF07136;
pfam_desc Protein of unknown function (DUF1385);
pfam_id DUF1385;
pfam_target db:Pfam-A.hmm|PF07136.11 evalue:1.1e-12 score:47.0 best_domain_score:46.8 name:DUF1385;
tm_num 4;
13137 13802 transmembrane_helix
ID metaerg.pl|01837
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i13221-13289o13317-13385i13512-13571o13584-13643i;
14158 13973 CDS
ID metaerg.pl|01838
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583022.1 1 61 evalue:1.3e-22 qcov:100.00 identity:98.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF10958;
pfam_desc Protein of unknown function (DUF2759);
pfam_id DUF2759;
pfam_target db:Pfam-A.hmm|PF10958.8 evalue:1.9e-17 score:61.9 best_domain_score:61.7 name:DUF2759;
tm_num 2;
14158 13973 transmembrane_helix
ID metaerg.pl|01839
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o13982-14035i14054-14122o;
14359 14997 CDS
ID metaerg.pl|01840
allec_ids 3.-.-.-;
allgo_ids GO:0016787; GO:0046872;
allko_ids K01069; K01180; K01011;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583020.1 1 212 evalue:1.9e-116 qcov:100.00 identity:92.90;
kegg_pathway_id 00272; 00620;
kegg_pathway_name Cysteine metabolism; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:2.6e-28 score:98.6 best_domain_score:98.4 name:Lactamase_B;
sprot_desc Probable metallo-hydrolase YqgX;
sprot_id sp|P54501|YQGX_BACSU;
sprot_target db:uniprot_sprot|sp|P54501|YQGX_BACSU 1 210 evalue:8.5e-63 qcov:99.10 identity:52.90;
15299 15054 CDS
ID metaerg.pl|01841
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583018.1 1 81 evalue:8.3e-36 qcov:100.00 identity:100.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF11117;
pfam_desc Protein of unknown function (DUF2626);
pfam_id DUF2626;
pfam_target db:Pfam-A.hmm|PF11117.8 evalue:5.2e-38 score:128.9 best_domain_score:128.7 name:DUF2626;
sprot_desc hypothetical protein;
sprot_id sp|P54502|YQGY_BACSU;
sprot_target db:uniprot_sprot|sp|P54502|YQGY_BACSU 1 81 evalue:2.4e-26 qcov:100.00 identity:69.10;
tm_num 3;
15299 15054 transmembrane_helix
ID metaerg.pl|01842
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i15072-15119o15132-15185i15204-15272o;
15857 16399 CDS
ID metaerg.pl|01843
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583016.1 1 180 evalue:8.7e-78 qcov:100.00 identity:93.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF12732;
pfam_desc YtxH-like protein;
pfam_id YtxH;
pfam_target db:Pfam-A.hmm|PF12732.7 evalue:2.4e-22 score:78.5 best_domain_score:61.3 name:YtxH;
sp YES;
tm_num 1;
15857 15928 signal_peptide
ID metaerg.pl|01844
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
15857 16399 transmembrane_helix
ID metaerg.pl|01845
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i15881-15940o;
16628 17695 CDS
ID metaerg.pl|01846
allgo_ids GO:0005886; GO:0005524; GO:0016887; GO:0030420;
allko_ids K02243;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583014.1 1 355 evalue:8.5e-186 qcov:100.00 identity:96.30;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00437;
pfam_desc Type II/IV secretion system protein;
pfam_id T2SSE;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:5.3e-66 score:221.7 best_domain_score:221.1 name:T2SSE;
sprot_desc ComG operon protein 1;
sprot_id sp|P25953|COMGA_BACSU;
sprot_target db:uniprot_sprot|sp|P25953|COMGA_BACSU 8 349 evalue:1.2e-82 qcov:96.30 identity:44.30;
17692 18717 CDS
ID metaerg.pl|01847
allgo_ids GO:0016021; GO:0005886; GO:0030420; GO:0009306;
allko_ids K02244;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583012.1 1 341 evalue:1.1e-174 qcov:100.00 identity:93.50;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00482;
pfam_desc Type II secretion system (T2SS), protein F;
pfam_id T2SSF;
pfam_target db:Pfam-A.hmm|PF00482.23 evalue:6e-26 score:90.1 best_domain_score:54.8 name:T2SSF;
sprot_desc ComG operon protein 2;
sprot_id sp|P25954|COMGB_BACSU;
sprot_target db:uniprot_sprot|sp|P25954|COMGB_BACSU 25 338 evalue:1.2e-34 qcov:92.10 identity:29.00;
tm_num 3;
17692 18717 transmembrane_helix
ID metaerg.pl|01848
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i18019-18087o18163-18231i18628-18696o;
18958 19281 CDS
ID metaerg.pl|01849
allgo_ids GO:0009986; GO:0016021; GO:0005886; GO:0015627; GO:0030420; GO:0015628;
allko_ids K02245;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583256.1 4 107 evalue:4.4e-45 qcov:97.20 identity:97.10;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF07963;
pfam_desc Prokaryotic N-terminal methylation motif;
pfam_id N_methyl;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:4.1e-10 score:38.0 best_domain_score:37.3 name:N_methyl;
sprot_desc ComG operon protein 3 homolog;
sprot_id sp|Q8VQ71|COMGC_BACLD;
sprot_target db:uniprot_sprot|sp|Q8VQ71|COMGC_BACLD 10 104 evalue:3.0e-16 qcov:88.80 identity:49.00;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:3.2e-09 score:35.4 best_domain_score:34.7 name:TIGR02532;
tm_num 1;
18958 19281 transmembrane_helix
ID metaerg.pl|01850
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o19000-19068i;
19274 19705 CDS
ID metaerg.pl|01851
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583010.1 1 143 evalue:5.5e-67 qcov:100.00 identity:93.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF07963;
pfam_desc Prokaryotic N-terminal methylation motif;
pfam_id N_methyl;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:9.9e-06 score:24.2 best_domain_score:23.6 name:N_methyl;
sp YES;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:5.4e-06 score:25.2 best_domain_score:24.7 name:TIGR02532;
tm_num 1;
19274 19345 signal_peptide
ID metaerg.pl|01852
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
19274 19705 transmembrane_helix
ID metaerg.pl|01853
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i19286-19354o;
19728 20009 CDS
ID metaerg.pl|01854
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583008.1 1 93 evalue:1.5e-41 qcov:100.00 identity:94.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
tm_num 1;
19728 20009 transmembrane_helix
ID metaerg.pl|01855
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i19740-19808o;
20029 20481 CDS
ID metaerg.pl|01856
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583006.1 1 150 evalue:5.4e-73 qcov:100.00 identity:90.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF15980;
pfam_desc Putative Competence protein ComGF;
pfam_id ComGF;
pfam_target db:Pfam-A.hmm|PF15980.5 evalue:8.5e-15 score:54.2 best_domain_score:53.8 name:ComGF;
tm_num 1;
20029 20481 transmembrane_helix
ID metaerg.pl|01857
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o20038-20106i;
20465 20851 CDS
ID metaerg.pl|01858
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583004.1 1 128 evalue:2.8e-54 qcov:100.00 identity:83.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
tm_num 1;
20465 20851 transmembrane_helix
ID metaerg.pl|01859
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o20492-20560i;
21241 22329 CDS
ID metaerg.pl|01860
allec_ids 2.1.2.10;
allgo_ids GO:0004047; GO:0008483; GO:0019464;
allko_ids K00302; K00314; K00282; K00605;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583002.1 1 362 evalue:3.4e-198 qcov:100.00 identity:93.60;
kegg_pathway_id 00910; 00670; 00260;
kegg_pathway_name Nitrogen metabolism; One carbon pool by folate; Glycine, serine and threonine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id GLYCLEAV-PWY;
metacyc_pathway_name glycine cleavage;;
metacyc_pathway_type GLYCINE-DEG;;
pfam_acc PF01571; PF08669; PF04268;
pfam_desc Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; Sarcosine oxidase, gamma subunit family;
pfam_id GCV_T; GCV_T_C; SoxG;
pfam_target db:Pfam-A.hmm|PF01571.21 evalue:1.6e-92 score:308.7 best_domain_score:308.4 name:GCV_T; db:Pfam-A.hmm|PF08669.11 evalue:7.3e-24 score:82.7 best_domain_score:81.2 name:GCV_T_C; db:Pfam-A.hmm|PF04268.12 evalue:9.3e-08 score:31.6 best_domain_score:26.5 name:SoxG;
sprot_desc Aminomethyltransferase;
sprot_id sp|C5D4A2|GCST_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D4A2|GCST_GEOSW 1 361 evalue:2.4e-134 qcov:99.70 identity:64.40;
tigrfam_acc TIGR00528;
tigrfam_desc glycine cleavage system T protein;
tigrfam_mainrole Energy metabolism;
tigrfam_name gcvT;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00528 evalue:8e-142 score:471.6 best_domain_score:471.3 name:TIGR00528;
22349 23695 CDS
ID metaerg.pl|01861
allec_ids 1.4.4.2;
allgo_ids GO:0009058; GO:0030170; GO:0004375; GO:0019464; GO:0009116;
allko_ids K00283; K00281; K00282;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583000.1 1 448 evalue:1.9e-246 qcov:100.00 identity:96.00;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id GLYCLEAV-PWY;
metacyc_pathway_name glycine cleavage;;
metacyc_pathway_type GLYCINE-DEG;;
pfam_acc PF00155; PF00266; PF02347;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Glycine cleavage system P-protein;
pfam_id Aminotran_1_2; Aminotran_5; GDC-P;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:2.3e-05 score:23.0 best_domain_score:18.1 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:1.3e-07 score:30.1 best_domain_score:28.9 name:Aminotran_5; db:Pfam-A.hmm|PF02347.16 evalue:1.2e-153 score:511.3 best_domain_score:511.1 name:GDC-P;
sprot_desc Probable glycine dehydrogenase (decarboxylating) subunit 1;
sprot_id sp|A7GSN7|GCSPA_BACCN;
sprot_target db:uniprot_sprot|sp|A7GSN7|GCSPA_BACCN 5 444 evalue:6.0e-175 qcov:98.20 identity:68.00;
23692 25155 CDS
ID metaerg.pl|01862
allec_ids 1.4.4.2;
allgo_ids GO:0004375; GO:0006546; GO:0055114; GO:0019464;
allko_ids K00282; K00281; K00283;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582998.1 1 487 evalue:1.1e-279 qcov:100.00 identity:96.70;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id GLYCLEAV-PWY;
metacyc_pathway_name glycine cleavage;;
metacyc_pathway_type GLYCINE-DEG;;
pfam_acc PF02347;
pfam_desc Glycine cleavage system P-protein;
pfam_id GDC-P;
pfam_target db:Pfam-A.hmm|PF02347.16 evalue:4.8e-15 score:54.5 best_domain_score:48.0 name:GDC-P;
sprot_desc Probable glycine dehydrogenase (decarboxylating) subunit 2;
sprot_id sp|Q9K936|GCSPB_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K936|GCSPB_BACHD 1 485 evalue:7.5e-240 qcov:99.60 identity:81.00;
25618 25244 CDS
ID metaerg.pl|01863
allgo_ids GO:0016021; GO:0005886;
allko_ids K14165; K01802; K02439; K01069; K01738; K01007; K01011; K04564;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582996.1 1 124 evalue:3.3e-60 qcov:100.00 identity:96.80;
kegg_pathway_id 00272; 00450; 00920; 00620; 00720;
kegg_pathway_name Cysteine metabolism; Selenoamino acid metabolism; Sulfur metabolism; Pyruvate metabolism; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00581;
pfam_desc Rhodanese-like domain;
pfam_id Rhodanese;
pfam_target db:Pfam-A.hmm|PF00581.20 evalue:2.4e-17 score:62.7 best_domain_score:62.2 name:Rhodanese;
sprot_desc hypothetical protein;
sprot_id sp|P54510|YQHL_BACSU;
sprot_target db:uniprot_sprot|sp|P54510|YQHL_BACSU 7 123 evalue:8.0e-29 qcov:94.40 identity:57.00;
tm_num 1;
25618 25244 transmembrane_helix
ID metaerg.pl|01864
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o25253-25306i;
25756 26586 CDS
ID metaerg.pl|01865
allec_ids 2.3.1.181;
allgo_ids GO:0006464; GO:0033819; GO:0102555; GO:0009107; GO:0009249;
allko_ids K03800;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583255.1 1 276 evalue:1.1e-143 qcov:100.00 identity:92.00;
kegg_pathway_id 00785;
kegg_pathway_name Lipoic acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY0-501;
metacyc_pathway_name lipoate biosynthesis and incorporation I;;
metacyc_pathway_type Lipoate-Biosynthesis;;
pfam_acc PF03099;
pfam_desc Biotin/lipoate A/B protein ligase family;
pfam_id BPL_LplA_LipB;
pfam_target db:Pfam-A.hmm|PF03099.19 evalue:1.5e-24 score:85.6 best_domain_score:84.9 name:BPL_LplA_LipB;
sprot_desc Octanoyltransferase LipM;
sprot_id sp|Q9K938|LIPM_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K938|LIPM_BACHD 1 275 evalue:1.3e-103 qcov:99.60 identity:62.90;
26872 29439 CDS
ID metaerg.pl|01866
allec_ids 1.17.4.1;
allgo_ids GO:0006260; GO:0055114;
allko_ids K00525; K10807; K00527;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582994.1 1 855 evalue:0.0e+00 qcov:100.00 identity:97.90;
kegg_pathway_id 00230; 00240; 00480;
kegg_pathway_name Purine metabolism; Pyrimidine metabolism; Glutathione metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6126; PWY-6545; PRPP-PWY; PWY-6125; PWY0-166;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of adenosine nucleotides de novo biosynthesis II;; pyrimidine deoxyribonucleotides de novo biosynthesis III;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of guanosine nucleotides de novo biosynthesis II;; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF02867;
pfam_desc Ribonucleotide reductase, barrel domain;
pfam_id Ribonuc_red_lgC;
pfam_target db:Pfam-A.hmm|PF02867.15 evalue:2.3e-122 score:408.4 best_domain_score:407.9 name:Ribonuc_red_lgC;
tigrfam_acc TIGR02504;
tigrfam_desc ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name NrdJ_Z;
tigrfam_sub1role 2'-Deoxyribonucleotide metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR02504 evalue:3.9e-177 score:589.6 best_domain_score:587.4 name:TIGR02504;
29775 30209 CDS
ID metaerg.pl|01867
allgo_ids GO:0003677; GO:0005737; GO:0003700; GO:0030145; GO:0046983; GO:0030026;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582991.1 1 144 evalue:4.0e-73 qcov:100.00 identity:99.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01325; PF02742; PF09339;
pfam_desc Iron dependent repressor, N-terminal DNA binding domain; Iron dependent repressor, metal binding and dimerisation domain; IclR helix-turn-helix domain;
pfam_id Fe_dep_repress; Fe_dep_repr_C; HTH_IclR;
pfam_target db:Pfam-A.hmm|PF01325.19 evalue:9.7e-25 score:85.8 best_domain_score:85.2 name:Fe_dep_repress; db:Pfam-A.hmm|PF02742.15 evalue:1.5e-19 score:69.1 best_domain_score:67.8 name:Fe_dep_repr_C; db:Pfam-A.hmm|PF09339.10 evalue:5.5e-05 score:22.1 best_domain_score:17.3 name:HTH_IclR;
sprot_desc HTH-type transcriptional regulator MntR;
sprot_id sp|C3P8B4|MNTR_BACAA;
sprot_target db:uniprot_sprot|sp|C3P8B4|MNTR_BACAA 1 139 evalue:2.2e-62 qcov:96.50 identity:84.20;
31163 30366 CDS
ID metaerg.pl|01868
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582989.1 1 265 evalue:2.5e-137 qcov:100.00 identity:95.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
tm_num 7;
31163 30366 transmembrane_helix
ID metaerg.pl|01869
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o30393-30452i30471-30539o30567-30626i30687-30755o30798-30902i30963-31031o31059-31127i;
31631 31221 CDS
ID metaerg.pl|01870
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582987.1 1 136 evalue:1.8e-59 qcov:100.00 identity:91.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
tm_num 2;
31631 31221 transmembrane_helix
ID metaerg.pl|01871
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i31233-31301o31311-31370i;
32114 33175 CDS
ID metaerg.pl|01872
allec_ids 3.4.-.-;
allgo_ids GO:0016787; GO:0046872;
allko_ids K01262;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582985.1 1 353 evalue:7.0e-180 qcov:100.00 identity:90.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01321; PF00557;
pfam_desc Creatinase/Prolidase N-terminal domain; Metallopeptidase family M24;
pfam_id Creatinase_N; Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF01321.18 evalue:3.1e-29 score:101.5 best_domain_score:100.7 name:Creatinase_N; db:Pfam-A.hmm|PF00557.24 evalue:1e-66 score:223.8 best_domain_score:223.2 name:Peptidase_M24;
sp YES;
sprot_desc Uncharacterized peptidase YqhT;
sprot_id sp|P54518|YQHT_BACSU;
sprot_target db:uniprot_sprot|sp|P54518|YQHT_BACSU 3 353 evalue:2.6e-109 qcov:99.40 identity:57.40;
32114 32254 signal_peptide
ID metaerg.pl|01873
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
33240 33797 CDS
ID metaerg.pl|01874
allgo_ids GO:0003746; GO:0006414; GO:0005737;
allko_ids K02356;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582983.1 1 185 evalue:6.0e-98 qcov:100.00 identity:98.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01132; PF08207; PF09285;
pfam_desc Elongation factor P (EF-P) OB domain; Elongation factor P (EF-P) KOW-like domain; Elongation factor P, C-terminal;
pfam_id EFP; EFP_N; Elong-fact-P_C;
pfam_target db:Pfam-A.hmm|PF01132.20 evalue:4.1e-20 score:70.8 best_domain_score:70.0 name:EFP; db:Pfam-A.hmm|PF08207.12 evalue:2.3e-28 score:97.2 best_domain_score:96.1 name:EFP_N; db:Pfam-A.hmm|PF09285.11 evalue:7.9e-30 score:101.6 best_domain_score:100.4 name:Elong-fact-P_C;
sprot_desc Elongation factor P;
sprot_id sp|Q8EQ28|EFP_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8EQ28|EFP_OCEIH 1 185 evalue:1.6e-81 qcov:100.00 identity:79.50;
tigrfam_acc TIGR00038;
tigrfam_desc translation elongation factor P;
tigrfam_mainrole Protein synthesis;
tigrfam_name efp;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00038 evalue:3.5e-81 score:270.4 best_domain_score:270.3 name:TIGR00038;
33837 34172 CDS
ID metaerg.pl|01875
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582981.1 1 111 evalue:1.1e-51 qcov:100.00 identity:93.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
34518 35015 CDS
ID metaerg.pl|01876
allgo_ids GO:0009317; GO:0003989; GO:0006633;
allko_ids K00658; K01965; K02160;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582979.1 1 165 evalue:7.5e-68 qcov:100.00 identity:86.70;
kegg_pathway_id 00310; 00280; 00620; 00061; 00640; 00020; 00253;
kegg_pathway_name Lysine degradation; Valine, leucine and isoleucine degradation; Pyruvate metabolism; Fatty acid biosynthesis; Propanoate metabolism; Citrate cycle (TCA cycle); Tetracycline biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00364;
pfam_desc Biotin-requiring enzyme;
pfam_id Biotin_lipoyl;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:1.1e-21 score:75.7 best_domain_score:74.9 name:Biotin_lipoyl;
sprot_desc Biotin carboxyl carrier protein of acetyl-CoA carboxylase;
sprot_id sp|P49786|BCCP_BACSU;
sprot_target db:uniprot_sprot|sp|P49786|BCCP_BACSU 1 165 evalue:6.5e-34 qcov:100.00 identity:55.70;
tigrfam_acc TIGR00531;
tigrfam_desc acetyl-CoA carboxylase, biotin carboxyl carrier protein;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name BCCP;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00531 evalue:3.4e-53 score:179.4 best_domain_score:179.2 name:TIGR00531;
35025 36383 CDS
ID metaerg.pl|01877
allec_ids 6.3.4.14;
allgo_ids GO:0005524; GO:0046872; GO:0003989; GO:0004075; GO:0006633; GO:2001295;
allko_ids K11541; K01571; K01965; K01941; K01955; K01457; K01959; K01589; K01966; K01954; K11540; K08289; K01968; K00609; K01960; K01958; K14541; K03416; K01964; K01956; K01961;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582977.1 1 452 evalue:1.4e-257 qcov:100.00 identity:99.10;
kegg_pathway_id 00280; 00670; 00230; 00240; 00020; 00791; 00251; 00252; 00220; 00330; 00620; 00640; 00061; 00253;
kegg_pathway_name Valine, leucine and isoleucine degradation; One carbon pool by folate; Purine metabolism; Pyrimidine metabolism; Citrate cycle (TCA cycle); Atrazine degradation; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Arginine and proline metabolism; Pyruvate metabolism; Propanoate metabolism; Fatty acid biosynthesis; Tetracycline biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY0-1264;
metacyc_pathway_name biotin-carboxyl carrier protein assembly;;
metacyc_pathway_type Lipid-Biosynthesis;;
pfam_acc PF02222; PF02655; PF02785; PF00289; PF02786; PF07478; PF08443;
pfam_desc ATP-grasp domain; ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus; RimK-like ATP-grasp domain;
pfam_id ATP-grasp; ATP-grasp_3; Biotin_carb_C; Biotin_carb_N; CPSase_L_D2; Dala_Dala_lig_C; RimK;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:7.1e-09 score:34.7 best_domain_score:32.6 name:ATP-grasp; db:Pfam-A.hmm|PF02655.14 evalue:2.6e-05 score:23.6 best_domain_score:22.5 name:ATP-grasp_3; db:Pfam-A.hmm|PF02785.19 evalue:8.4e-46 score:153.8 best_domain_score:152.5 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:1.4e-46 score:156.8 best_domain_score:149.5 name:Biotin_carb_N; db:Pfam-A.hmm|PF02786.17 evalue:1.2e-81 score:272.5 best_domain_score:271.7 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:5.1e-11 score:41.7 best_domain_score:40.0 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF08443.11 evalue:1.2e-08 score:34.1 best_domain_score:32.3 name:RimK;
sprot_desc Biotin carboxylase 1;
sprot_id sp|P49787|ACCC1_BACSU;
sprot_target db:uniprot_sprot|sp|P49787|ACCC1_BACSU 1 447 evalue:3.1e-195 qcov:98.90 identity:72.90;
tigrfam_acc TIGR00514;
tigrfam_desc acetyl-CoA carboxylase, biotin carboxylase subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accC;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00514 evalue:6.4e-234 score:775.9 best_domain_score:775.6 name:TIGR00514;
36386 36796 CDS
ID metaerg.pl|01878
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582975.1 1 136 evalue:6.8e-67 qcov:100.00 identity:98.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF03780;
pfam_desc Asp23 family, cell envelope-related function;
pfam_id Asp23;
pfam_target db:Pfam-A.hmm|PF03780.13 evalue:5.7e-33 score:112.8 best_domain_score:112.6 name:Asp23;
sprot_desc hypothetical protein;
sprot_id sp|P54519|YQHY_BACSU;
sprot_target db:uniprot_sprot|sp|P54519|YQHY_BACSU 1 129 evalue:2.7e-30 qcov:94.90 identity:49.60;
37004 37405 CDS
ID metaerg.pl|01879
allgo_ids GO:0003723; GO:0006355; GO:0006353; GO:0031564;
allko_ids K03625;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582973.1 1 133 evalue:1.6e-60 qcov:100.00 identity:96.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01029;
pfam_desc NusB family;
pfam_id NusB;
pfam_target db:Pfam-A.hmm|PF01029.18 evalue:3.1e-35 score:120.6 best_domain_score:120.4 name:NusB;
sprot_desc Transcription antitermination protein NusB;
sprot_id sp|Q9K965|NUSB_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K965|NUSB_BACHD 1 125 evalue:1.7e-29 qcov:94.00 identity:52.00;
tigrfam_acc TIGR01951;
tigrfam_desc transcription antitermination factor NusB;
tigrfam_mainrole Transcription;
tigrfam_name nusB;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR01951 evalue:5.5e-40 score:135.8 best_domain_score:135.6 name:TIGR01951;
37437 38300 CDS
ID metaerg.pl|01880
allec_ids 1.5.1.5; 3.5.4.9;
allgo_ids GO:0004488; GO:0055114; GO:0004477; GO:0000105; GO:0009086; GO:0006164; GO:0035999;
allko_ids K01491; K13402; K01938; K13403; K00288;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582971.1 1 287 evalue:1.6e-153 qcov:100.00 identity:96.90;
kegg_pathway_id 00630; 00670;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; One carbon pool by folate;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-3841; P164-PWY; PWY-5030; PWY-2201; CODH-PWY; PWY-1882; PWY-5497; PWY-6146; PWY-6142; ALL-CHORISMATE-PWY; 1CMET2-PWY; FOLSYN-PWY; PWY-1722;
metacyc_pathway_name folate transformations II;; purine nucleobases degradation I (anaerobic);; L-histidine degradation III;; folate transformations I;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; superpathway of C1 compounds oxidation to CO2;; purine nucleobases degradation II (anaerobic);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; superpathway of chorismate metabolism;; N10-formyl-tetrahydrofolate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; formate assimilation into 5,10-methylenetetrahydrofolate;;
metacyc_pathway_type Folate-Transformations;; Fermentation; Purine-Degradation;; HISTIDINE-DEG;; Folate-Transformations;; Autotrophic-CO2-Fixation;; C1-COMPOUNDS; Super-Pathways;; Fermentation; Purine-Degradation;; Biosynthesis; Super-Pathways;; Gluconeogenesis; Super-Pathways;; Super-Pathways;; Folate-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; C1-COMPOUNDS;;
pfam_acc PF00763; PF02882;
pfam_desc Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain;
pfam_id THF_DHG_CYH; THF_DHG_CYH_C;
pfam_target db:Pfam-A.hmm|PF00763.23 evalue:2.2e-41 score:140.0 best_domain_score:139.2 name:THF_DHG_CYH; db:Pfam-A.hmm|PF02882.19 evalue:8.2e-73 score:242.2 best_domain_score:241.7 name:THF_DHG_CYH_C;
sprot_desc Bifunctional protein FolD;
sprot_id sp|A7GSJ9|FOLD_BACCN;
sprot_target db:uniprot_sprot|sp|A7GSJ9|FOLD_BACCN 1 281 evalue:5.5e-105 qcov:97.90 identity:65.50;
38302 39657 CDS
ID metaerg.pl|01881
allec_ids 3.1.11.6;
allgo_ids GO:0008855; GO:0005737; GO:0009318; GO:0003676; GO:0006308;
allko_ids K03601;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582969.1 1 451 evalue:6.7e-236 qcov:100.00 identity:96.50;
kegg_pathway_id 03430;
kegg_pathway_name Mismatch repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF02601; PF01336; PF13742;
pfam_desc Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; OB-fold nucleic acid binding domain;
pfam_id Exonuc_VII_L; tRNA_anti-codon; tRNA_anti_2;
pfam_target db:Pfam-A.hmm|PF02601.15 evalue:3.8e-100 score:334.6 best_domain_score:334.2 name:Exonuc_VII_L; db:Pfam-A.hmm|PF01336.25 evalue:1e-08 score:34.2 best_domain_score:27.4 name:tRNA_anti-codon; db:Pfam-A.hmm|PF13742.6 evalue:3.2e-30 score:103.4 best_domain_score:102.2 name:tRNA_anti_2;
sprot_desc Exodeoxyribonuclease 7 large subunit;
sprot_id sp|Q75TC0|EX7L_GEOKA;
sprot_target db:uniprot_sprot|sp|Q75TC0|EX7L_GEOKA 1 440 evalue:7.7e-114 qcov:97.60 identity:51.60;
tigrfam_acc TIGR00237;
tigrfam_desc exodeoxyribonuclease VII, large subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name xseA;
tigrfam_sub1role Degradation of DNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00237 evalue:3.4e-156 score:519.4 best_domain_score:458.4 name:TIGR00237;
39657 39887 CDS
ID metaerg.pl|01882
allec_ids 3.1.11.6;
allgo_ids GO:0006308; GO:0008855; GO:0009318; GO:0005737;
allko_ids K03602;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582967.1 1 76 evalue:5.2e-32 qcov:100.00 identity:98.70;
kegg_pathway_id 03430;
kegg_pathway_name Mismatch repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF02609;
pfam_desc Exonuclease VII small subunit;
pfam_id Exonuc_VII_S;
pfam_target db:Pfam-A.hmm|PF02609.16 evalue:1.3e-23 score:82.0 best_domain_score:81.7 name:Exonuc_VII_S;
sprot_desc Exodeoxyribonuclease 7 small subunit;
sprot_id sp|A4IQR9|EX7S_GEOTN;
sprot_target db:uniprot_sprot|sp|A4IQR9|EX7S_GEOTN 1 75 evalue:9.6e-17 qcov:98.70 identity:60.00;
tigrfam_acc TIGR01280;
tigrfam_desc exodeoxyribonuclease VII, small subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name xseB;
tigrfam_sub1role Degradation of DNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR01280 evalue:2.2e-24 score:84.4 best_domain_score:84.2 name:TIGR01280;
39889 40776 CDS
ID metaerg.pl|01883
allec_ids 2.5.1.10;
allgo_ids GO:0008299; GO:0005737; GO:0004337; GO:0046872;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583254.1 38 295 evalue:6.3e-134 qcov:87.50 identity:95.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5123; PWY-5121; PWY-5910; POLYISOPRENSYN-PWY; PWY-6146;
metacyc_pathway_name trans, trans-farnesyl diphosphate biosynthesis;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; polyisoprenoid biosynthesis (E. coli);; Methanobacterium thermoautotrophicum biosynthetic metabolism;;
metacyc_pathway_type All-Trans-Farnesyl-PP-Biosynthesis;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis; Super-Pathways;; Biosynthesis; Super-Pathways;;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:1.8e-58 score:196.9 best_domain_score:196.6 name:polyprenyl_synt;
sprot_desc Farnesyl diphosphate synthase;
sprot_id sp|Q08291|ISPA_GEOSE;
sprot_target db:uniprot_sprot|sp|Q08291|ISPA_GEOSE 6 294 evalue:1.6e-80 qcov:98.00 identity:52.20;
41426 42034 CDS
ID metaerg.pl|01884
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582963.1 1 202 evalue:4.7e-96 qcov:100.00 identity:100.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
tm_num 4;
41426 42034 transmembrane_helix
ID metaerg.pl|01885
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i41459-41527o41555-41623i41729-41797o41825-41893i;
42044 43933 CDS
ID metaerg.pl|01886
allec_ids 2.2.1.7;
allgo_ids GO:0008661; GO:0016114; GO:0000287; GO:0030976; GO:0052865; GO:0009228;
allko_ids K00615; K00163; K00161; K01662;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582961.1 1 629 evalue:0.0e+00 qcov:100.00 identity:97.90;
kegg_pathway_id 00650; 00620; 01051; 00252; 00020; 00100; 00710; 00030; 00010; 00290;
kegg_pathway_name Butanoate metabolism; Pyruvate metabolism; Biosynthesis of ansamycins; Alanine and aspartate metabolism; Citrate cycle (TCA cycle); Biosynthesis of steroids; Carbon fixation in photosynthetic organisms; Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5121; PWY0-845; THISYN-PWY; PWY-6270; NONMEVIPP-PWY; PYRIDOXSYN-PWY;
metacyc_pathway_name superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;; superpathway of thiamine diphosphate biosynthesis I;; isoprene biosynthesis I;; methylerythritol phosphate pathway I;; pyridoxal 5'-phosphate biosynthesis I;;
metacyc_pathway_type DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; Super-Pathways; Vitamin-B6-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;; ISOPRENOIDS; Super-Pathways;; MEP-Pathways;; Vitamin-B6-Biosynthesis;;
pfam_acc PF13292; PF02775; PF02780; PF00456; PF02779;
pfam_desc 1-deoxy-D-xylulose-5-phosphate synthase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Transketolase, C-terminal domain; Transketolase, thiamine diphosphate binding domain; Transketolase, pyrimidine binding domain;
pfam_id DXP_synthase_N; TPP_enzyme_C; Transketolase_C; Transketolase_N; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF13292.6 evalue:6.1e-114 score:379.1 best_domain_score:376.7 name:DXP_synthase_N; db:Pfam-A.hmm|PF02775.21 evalue:7.1e-09 score:34.9 best_domain_score:27.8 name:TPP_enzyme_C; db:Pfam-A.hmm|PF02780.20 evalue:3.8e-33 score:113.3 best_domain_score:107.3 name:Transketolase_C; db:Pfam-A.hmm|PF00456.21 evalue:2.2e-06 score:26.1 best_domain_score:14.3 name:Transketolase_N; db:Pfam-A.hmm|PF02779.24 evalue:1.1e-38 score:132.0 best_domain_score:131.1 name:Transket_pyr;
sprot_desc 1-deoxy-D-xylulose-5-phosphate synthase;
sprot_id sp|Q9K971|DXS_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K971|DXS_BACHD 1 629 evalue:1.7e-284 qcov:100.00 identity:72.20;
tigrfam_acc TIGR00204;
tigrfam_desc 1-deoxy-D-xylulose-5-phosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name dxs;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00204 evalue:4.6e-276 score:916.4 best_domain_score:916.2 name:TIGR00204;
43936 44742 CDS
ID metaerg.pl|01887
allec_ids 2.1.1.-;
allgo_ids GO:0008168; GO:0032259; GO:0003723; GO:0006364;
allko_ids K06442;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582959.1 1 268 evalue:1.7e-138 qcov:100.00 identity:94.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-6292; PWY-5479; PWY-5987; PWY-6146; PWY-6427; PWY-6395; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-5773; PWY-6519; METHIONINE-DEG1-PWY; PWY-5328; CO2FORM-PWY; PWY-5116; PWY-1581; PWY-6142; PWY-6154; UBISYN-PWY; PWY-6424; PWY-5856; METH-ACETATE-PWY; PWY-5857; PWY-6303; PWY-5209; PWY-5855; PWY-6151; PWY-1422; PWY-6113; PWY-5729; PWY-5305; PWYG-321; PWY-5864; PWY-5975; PWY-5876; PWY-1061; PWY-6153; PWY-3542; ALL-CHORISMATE-PWY; PWY-4021; PWY-5041; PWY-6442; PWY-6575; CODH-PWY; PWY-6477; PWY-5467;
metacyc_pathway_name superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; xanthohumol biosynthesis;; biotin biosynthesis I;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ; ubiquinol-9 biosynthesis (prokaryotic);; methanogenesis from acetate;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; S-adenosyl-L-methionine cycle I;; vitamin E biosynthesis (tocopherols);; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; magnoflorine biosynthesis;; homogalacturonan biosynthesis;; autoinducer AI-2 biosynthesis I;; choline biosynthesis II;; superpathway of chorismate metabolism;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; gibberellin inactivation II (methylation);; gramine biosynthesis;;
metacyc_pathway_type CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Autoinducer-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; ; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; Autoinducer-Biosynthesis;; Choline-Biosynthesis;; Super-Pathways;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Autotrophic-CO2-Fixation;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;;
pfam_acc PF01728; PF01479;
pfam_desc FtsJ-like methyltransferase; S4 domain;
pfam_id FtsJ; S4;
pfam_target db:Pfam-A.hmm|PF01728.19 evalue:3.3e-20 score:72.1 best_domain_score:71.8 name:FtsJ; db:Pfam-A.hmm|PF01479.25 evalue:2e-09 score:36.3 best_domain_score:35.4 name:S4;
sprot_desc Putative rRNA methyltransferase YqxC;
sprot_id sp|P19672|YQXC_BACSU;
sprot_target db:uniprot_sprot|sp|P19672|YQXC_BACSU 2 263 evalue:2.8e-87 qcov:97.80 identity:62.00;
tigrfam_acc TIGR00478;
tigrfam_desc TlyA family rRNA methyltransferase/putative hemolysin;
tigrfam_mainrole Unknown function;
tigrfam_name tly;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00478 evalue:2.3e-85 score:284.7 best_domain_score:284.5 name:TIGR00478;
44768 45217 CDS
ID metaerg.pl|01888
allgo_ids GO:0003700; GO:0006355; GO:0006525; GO:0005737; GO:0034618; GO:0003677; GO:0006526; GO:0051259;
allko_ids K03402;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582957.1 1 149 evalue:9.4e-78 qcov:100.00 identity:98.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01316; PF02863;
pfam_desc Arginine repressor, DNA binding domain; Arginine repressor, C-terminal domain;
pfam_id Arg_repressor; Arg_repressor_C;
pfam_target db:Pfam-A.hmm|PF01316.21 evalue:1.8e-30 score:103.8 best_domain_score:103.3 name:Arg_repressor; db:Pfam-A.hmm|PF02863.18 evalue:8.4e-30 score:101.7 best_domain_score:101.0 name:Arg_repressor_C;
sprot_desc Arginine repressor;
sprot_id sp|Q9K973|ARGR_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K973|ARGR_BACHD 1 149 evalue:6.2e-68 qcov:100.00 identity:83.90;
tigrfam_acc TIGR01529;
tigrfam_desc arginine repressor;
tigrfam_mainrole Regulatory functions;
tigrfam_name argR_whole;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01529 evalue:2.1e-54 score:182.6 best_domain_score:182.5 name:TIGR01529;
45616 47340 CDS
ID metaerg.pl|01889
allgo_ids GO:0005524; GO:0006310; GO:0006281;
allko_ids K03631;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582955.1 1 574 evalue:2.2e-308 qcov:100.00 identity:98.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF13304; PF13476; PF13555; PF02463;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; P-loop containing region of AAA domain; RecF/RecN/SMC N terminal domain;
pfam_id AAA_21; AAA_23; AAA_29; SMC_N;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:9.6e-07 score:28.1 best_domain_score:15.3 name:AAA_21; db:Pfam-A.hmm|PF13476.6 evalue:1.1e-14 score:54.7 best_domain_score:48.0 name:AAA_23; db:Pfam-A.hmm|PF13555.6 evalue:5.9e-07 score:28.4 best_domain_score:27.3 name:AAA_29; db:Pfam-A.hmm|PF02463.19 evalue:4.4e-18 score:64.8 best_domain_score:64.4 name:SMC_N;
sprot_desc DNA repair protein RecN;
sprot_id sp|Q9K974|RECN_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K974|RECN_BACHD 1 574 evalue:1.6e-151 qcov:100.00 identity:51.00;
tigrfam_acc TIGR00634;
tigrfam_desc DNA repair protein RecN;
tigrfam_mainrole DNA metabolism;
tigrfam_name recN;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00634 evalue:1.9e-183 score:610.6 best_domain_score:610.4 name:TIGR00634;
47644 48423 CDS
ID metaerg.pl|01890
allgo_ids GO:0000160; GO:0005737; GO:0005509; GO:0003677; GO:0003700; GO:0008356; GO:0090529; GO:0051606; GO:0045881; GO:0090606; GO:0030435;
allko_ids K07644; K07676; K10681; K06379; K07647; K07717; K07675; K13761; K11383; K02486; K12767; K11357; K10125; K04757; K07716; K02489; K01768; K07710; K03388; K02668; K10916; K08479; K11527; K07678; K10715; K02480; K02482; K07636; K07653; K02484; K00760; K11640; K11711; K07642; K11231; K07708; K07677; K08282; K01120; K07673; K07639; K07646; K07641; K07652; K07682; K07654; K03407; K07648; K07679; K07651; K07768; K11354; K07778; K07711; K07699;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582954.1 1 259 evalue:8.8e-140 qcov:100.00 identity:97.70;
kegg_pathway_id 02020; 04011; 00983; 03090; 00790; 05111; 00230;
kegg_pathway_name Two-component system - General; MAPK signaling pathway - yeast; Drug metabolism - other enzymes; Type II secretion system; Folate biosynthesis; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00072; PF08769;
pfam_desc Response regulator receiver domain; Sporulation initiation factor Spo0A C terminal;
pfam_id Response_reg; Spo0A_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:1e-27 score:95.8 best_domain_score:95.1 name:Response_reg; db:Pfam-A.hmm|PF08769.11 evalue:2.1e-45 score:152.3 best_domain_score:151.7 name:Spo0A_C;
sprot_desc Stage 0 sporulation protein A;
sprot_id sp|P06534|SP0A_BACSU;
sprot_target db:uniprot_sprot|sp|P06534|SP0A_BACSU 1 257 evalue:3.7e-100 qcov:99.20 identity:69.70;
tigrfam_acc TIGR02875;
tigrfam_desc sporulation transcription factor Spo0A;
tigrfam_mainrole Cellular processes;
tigrfam_name spore_0_A;
tigrfam_sub1role Sporulation and germination;
tigrfam_target db:TIGRFAMs.hmm|TIGR02875 evalue:1.9e-122 score:406.7 best_domain_score:406.5 name:TIGR02875;
48710 48441 CDS
ID metaerg.pl|01891
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583253.1 3 89 evalue:6.1e-40 qcov:97.80 identity:96.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF11118;
pfam_desc Protein of unknown function (DUF2627);
pfam_id DUF2627;
pfam_target db:Pfam-A.hmm|PF11118.8 evalue:3.5e-36 score:122.8 best_domain_score:122.7 name:DUF2627;
tm_num 2;
48710 48441 transmembrane_helix
ID metaerg.pl|01892
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i48453-48521o48564-48632i;
48870 50840 CDS
ID metaerg.pl|01893
allgo_ids GO:0005524; GO:0016021; GO:0005886; GO:0043565; GO:0008134; GO:0000160; GO:0006355;
allko_ids K08282; K07704; K07708; K07645; K01090; K02491; K11231; K07642; K11711; K04486; K02484; K13533; K07711; K02575; K07768; K07778; K07718; K07651; K07679; K03407; K07682; K00936; K07654; K07652; K01120; K13598; K07641; K07646; K10125; K02342; K11357; K02476; K11617; K04757; K07769; K14509; K02486; K11383; K07675; K11637; K07680; K06379; K07676; K01769; K07709; K07636; K07653; K02480; K02482; K08801; K07701; K11527; K02030; K13587; K03388; K02668; K01768; K07710; K07716; K11614; K02489;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582952.1 1 656 evalue:0.0e+00 qcov:100.00 identity:93.00;
kegg_pathway_id 00230; 00790; 03030; 00340; 04011; 02020; 03090;
kegg_pathway_name Purine metabolism; Folate biosynthesis; DNA replication; Histidine metabolism; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00004; PF07724; PF07726; PF07728; PF02954; PF00989; PF08448; PF13188; PF13426; PF00158; PF14532;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); Bacterial regulatory protein, Fis family; PAS fold; PAS fold; PAS domain; PAS domain; Sigma-54 interaction domain; Sigma-54 interaction domain;
pfam_id AAA; AAA_2; AAA_3; AAA_5; HTH_8; PAS; PAS_4; PAS_8; PAS_9; Sigma54_activat; Sigma54_activ_2;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:7.7e-09 score:35.3 best_domain_score:33.8 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:1.7e-06 score:27.5 best_domain_score:25.1 name:AAA_2; db:Pfam-A.hmm|PF07726.11 evalue:4.2e-05 score:22.6 best_domain_score:14.1 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:3.2e-06 score:26.4 best_domain_score:24.7 name:AAA_5; db:Pfam-A.hmm|PF02954.19 evalue:1e-11 score:43.6 best_domain_score:43.6 name:HTH_8; db:Pfam-A.hmm|PF00989.25 evalue:2.1e-28 score:97.8 best_domain_score:48.3 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:9.1e-17 score:60.5 best_domain_score:31.3 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:9.5e-15 score:53.5 best_domain_score:30.0 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:4.2e-13 score:48.7 best_domain_score:23.7 name:PAS_9; db:Pfam-A.hmm|PF00158.26 evalue:2.1e-67 score:225.3 best_domain_score:224.3 name:Sigma54_activat; db:Pfam-A.hmm|PF14532.6 evalue:1.5e-19 score:69.8 best_domain_score:64.8 name:Sigma54_activ_2;
sprot_desc Putative sigma L-dependent transcriptional regulator YqiR;
sprot_id sp|P54529|YQIR_BACSU;
sprot_target db:uniprot_sprot|sp|P54529|YQIR_BACSU 62 656 evalue:2.5e-185 qcov:90.70 identity:58.30;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:8e-31 score:106.0 best_domain_score:53.7 name:TIGR00229;
50986 51891 CDS
ID metaerg.pl|01894
allec_ids 2.3.1.19;
allgo_ids GO:0016746; GO:0050182; GO:0019605;
allko_ids K00634; K13788; K00625;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582950.1 1 300 evalue:3.0e-147 qcov:99.70 identity:92.70;
kegg_pathway_id 00430; 00650; 00640; 00620;
kegg_pathway_name Taurine and hypotaurine metabolism; Butanoate metabolism; Propanoate metabolism; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id GLUDEG-II-PWY; CENTFERM-PWY;
metacyc_pathway_name L-glutamate degradation VII (to butanoate);; pyruvate fermentation to butanoate;;
metacyc_pathway_type Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;;
pfam_acc PF01515;
pfam_desc Phosphate acetyl/butaryl transferase;
pfam_id PTA_PTB;
pfam_target db:Pfam-A.hmm|PF01515.19 evalue:1.7e-53 score:181.3 best_domain_score:168.7 name:PTA_PTB;
sprot_desc Probable phosphate butyryltransferase;
sprot_id sp|P54530|PTB_BACSU;
sprot_target db:uniprot_sprot|sp|P54530|PTB_BACSU 19 295 evalue:4.0e-66 qcov:92.00 identity:52.00;
52027 53124 CDS
ID metaerg.pl|01895
allec_ids 1.4.1.9;
allgo_ids GO:0006520; GO:0016491; GO:0055114; GO:0050049; GO:0006552;
allko_ids K00263; K00270; K00261;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582948.1 1 365 evalue:1.8e-202 qcov:100.00 identity:97.00;
kegg_pathway_id 00280; 00290; 00400; 00910; 00251; 00330; 00471; 00360;
kegg_pathway_name Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Nitrogen metabolism; Glutamate metabolism; Arginine and proline metabolism; D-Glutamine and D-glutamate metabolism; Phenylalanine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00208; PF02812;
pfam_desc Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF00208.21 evalue:4.1e-21 score:75.0 best_domain_score:45.4 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:2.2e-27 score:94.7 best_domain_score:94.1 name:ELFV_dehydrog_N;
sprot_desc Leucine dehydrogenase;
sprot_id sp|P13154|DHLE_GEOSE;
sprot_target db:uniprot_sprot|sp|P13154|DHLE_GEOSE 1 365 evalue:1.3e-172 qcov:100.00 identity:80.80;
53139 54245 CDS
ID metaerg.pl|01896
allec_ids 2.7.2.7;
allgo_ids GO:0005622; GO:0016301; GO:0016310; GO:0016774; GO:0005737; GO:0005524; GO:0047761;
allko_ids K00929;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582946.1 1 368 evalue:4.2e-196 qcov:100.00 identity:94.80;
kegg_pathway_id 00650;
kegg_pathway_name Butanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id GLUDEG-II-PWY; CENTFERM-PWY;
metacyc_pathway_name L-glutamate degradation VII (to butanoate);; pyruvate fermentation to butanoate;;
metacyc_pathway_type Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;;
pfam_acc PF00871;
pfam_desc Acetokinase family;
pfam_id Acetate_kinase;
pfam_target db:Pfam-A.hmm|PF00871.17 evalue:2e-71 score:240.0 best_domain_score:239.7 name:Acetate_kinase;
sprot_desc Probable butyrate kinase;
sprot_id sp|Q818T1|BUK_BACCR;
sprot_target db:uniprot_sprot|sp|Q818T1|BUK_BACCR 6 365 evalue:5.3e-137 qcov:97.80 identity:65.80;
tigrfam_acc TIGR02707;
tigrfam_desc butyrate kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name butyr_kinase;
tigrfam_sub1role Fermentation;
tigrfam_target db:TIGRFAMs.hmm|TIGR02707 evalue:1.3e-162 score:540.0 best_domain_score:539.8 name:TIGR02707;
54248 55675 CDS
ID metaerg.pl|01897
allec_ids 1.8.1.4;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0005737; GO:0004148; GO:0009055; GO:0050660; GO:0045454; GO:0006096;
allko_ids K00382; K00362; K00266; K01008; K00529; K00356; K03885; K00384; K00658; K00383; K03388;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582944.1 1 475 evalue:1.4e-255 qcov:100.00 identity:95.40;
kegg_pathway_id 00360; 00190; 00071; 00251; 00252; 00910; 00020; 00260; 00280; 00010; 00310; 00790; 00620; 00450; 00240; 00480;
kegg_pathway_name Phenylalanine metabolism; Oxidative phosphorylation; Fatty acid metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Nitrogen metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Lysine degradation; Folate biosynthesis; Pyruvate metabolism; Selenoamino acid metabolism; Pyrimidine metabolism; Glutathione metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5084; PWY-5173; GLYCLEAV-PWY; PYRUVDEHYD-PWY; PWY-5046; PWY-5464;
metacyc_pathway_name 2-oxoglutarate decarboxylation to succinyl-CoA;; superpathway of acetyl-CoA biosynthesis;; glycine cleavage;; pyruvate decarboxylation to acetyl CoA;; 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Respiration;; Acetyl-CoA-Biosynthesis; Super-Pathways;; GLYCINE-DEG;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Respiration;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF02737; PF00890; PF01134; PF13450; PF00070; PF07992; PF02852;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; FAD binding domain; Glucose inhibited division protein A; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id 3HCDH_N; FAD_binding_2; GIDA; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF02737.18 evalue:5.4e-07 score:28.9 best_domain_score:23.8 name:3HCDH_N; db:Pfam-A.hmm|PF00890.24 evalue:1.7e-05 score:23.4 best_domain_score:23.2 name:FAD_binding_2; db:Pfam-A.hmm|PF01134.22 evalue:6.4e-09 score:34.6 best_domain_score:28.0 name:GIDA; db:Pfam-A.hmm|PF13450.6 evalue:5.7e-05 score:22.5 best_domain_score:16.4 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:1.4e-18 score:66.5 best_domain_score:62.1 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1e-59 score:201.5 best_domain_score:201.1 name:Pyr_redox_2; db:Pfam-A.hmm|PF02852.22 evalue:7.2e-36 score:122.0 best_domain_score:118.3 name:Pyr_redox_dim;
sprot_desc Dihydrolipoyl dehydrogenase;
sprot_id sp|P54533|DLDH2_BACSU;
sprot_target db:uniprot_sprot|sp|P54533|DLDH2_BACSU 1 474 evalue:1.8e-182 qcov:99.80 identity:67.90;
tigrfam_acc TIGR01350;
tigrfam_desc dihydrolipoyl dehydrogenase;
tigrfam_name lipoamide_DH;
tigrfam_target db:TIGRFAMs.hmm|TIGR01350 evalue:8.5e-170 score:564.5 best_domain_score:564.4 name:TIGR01350;
55698 56693 CDS
ID metaerg.pl|01898
allec_ids 1.2.4.4;
allgo_ids GO:0016624; GO:0003863; GO:0003826; GO:0046872; GO:0009083;
allko_ids K00162; K00167; K00161; K00166; K11381;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582942.1 1 331 evalue:6.7e-185 qcov:100.00 identity:99.10;
kegg_pathway_id 00010; 00280; 00290; 00620; 00252; 00650; 00020;
kegg_pathway_name Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Pyruvate metabolism; Alanine and aspartate metabolism; Butanoate metabolism; Citrate cycle (TCA cycle);
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5046;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF00676;
pfam_desc Dehydrogenase E1 component;
pfam_id E1_dh;
pfam_target db:Pfam-A.hmm|PF00676.20 evalue:1e-100 score:335.8 best_domain_score:335.6 name:E1_dh;
sprot_desc 2-oxoisovalerate dehydrogenase subunit alpha;
sprot_id sp|P37940|ODBA_BACSU;
sprot_target db:uniprot_sprot|sp|P37940|ODBA_BACSU 1 328 evalue:1.1e-130 qcov:99.10 identity:70.10;
56698 57681 CDS
ID metaerg.pl|01899
allec_ids 1.2.4.4;
allgo_ids GO:0003863; GO:0003826; GO:0009083; GO:0007584;
allko_ids K00162; K00615; K00167; K00166; K11381; K00161;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582940.1 1 327 evalue:2.2e-180 qcov:100.00 identity:98.50;
kegg_pathway_id 01051; 00252; 00620; 00650; 00290; 00280; 00710; 00010; 00030; 00020;
kegg_pathway_name Biosynthesis of ansamycins; Alanine and aspartate metabolism; Pyruvate metabolism; Butanoate metabolism; Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Pentose phosphate pathway; Citrate cycle (TCA cycle);
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5046;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF17147; PF02780; PF02779;
pfam_desc Pyruvate:ferredoxin oxidoreductase core domain II; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain;
pfam_id PFOR_II; Transketolase_C; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF17147.4 evalue:1.1e-07 score:31.4 best_domain_score:30.4 name:PFOR_II; db:Pfam-A.hmm|PF02780.20 evalue:5.2e-38 score:129.0 best_domain_score:127.5 name:Transketolase_C; db:Pfam-A.hmm|PF02779.24 evalue:1.1e-52 score:177.5 best_domain_score:173.4 name:Transket_pyr;
sprot_desc 2-oxoisovalerate dehydrogenase subunit beta;
sprot_id sp|P37941|ODBB_BACSU;
sprot_target db:uniprot_sprot|sp|P37941|ODBB_BACSU 1 327 evalue:6.1e-153 qcov:100.00 identity:79.20;
57709 58980 CDS
ID metaerg.pl|01900
allec_ids 2.3.1.168;
allgo_ids GO:0016746; GO:0043754; GO:0006096;
allko_ids K00382; K00162; K00163; K00658; K11381; K09699;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582938.1 1 423 evalue:9.2e-203 qcov:100.00 identity:87.60;
kegg_pathway_id 00252; 00620; 00650; 00280; 00310; 00010; 00290; 00260; 00020;
kegg_pathway_name Alanine and aspartate metabolism; Pyruvate metabolism; Butanoate metabolism; Valine, leucine and isoleucine degradation; Lysine degradation; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine biosynthesis; Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle);
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5046;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF00198; PF00364; PF02817;
pfam_desc 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme; e3 binding domain;
pfam_id 2-oxoacid_dh; Biotin_lipoyl; E3_binding;
pfam_target db:Pfam-A.hmm|PF00198.23 evalue:3.8e-80 score:267.9 best_domain_score:267.6 name:2-oxoacid_dh; db:Pfam-A.hmm|PF00364.22 evalue:1.4e-23 score:81.8 best_domain_score:80.3 name:Biotin_lipoyl; db:Pfam-A.hmm|PF02817.17 evalue:9.6e-13 score:47.5 best_domain_score:47.3 name:E3_binding;
sprot_desc Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex;
sprot_id sp|P37942|ODB2_BACSU;
sprot_target db:uniprot_sprot|sp|P37942|ODB2_BACSU 4 423 evalue:2.0e-127 qcov:99.30 identity:57.80;
59120 59371 CDS
ID metaerg.pl|01901
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
59410 59838 CDS
ID metaerg.pl|01902
allec_ids 1.-.-.-;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582935.1 1 142 evalue:5.1e-73 qcov:100.00 identity:97.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5826; PWY-2821; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987;
metacyc_pathway_name hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;;
pfam_acc PF06491;
pfam_desc Disulphide isomerase;
pfam_id Disulph_isomer;
pfam_target db:Pfam-A.hmm|PF06491.11 evalue:5.2e-57 score:191.0 best_domain_score:190.8 name:Disulph_isomer;
sprot_desc hypothetical protein;
sprot_id sp|Q5WF77|Y2448_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WF77|Y2448_BACSK 2 141 evalue:7.5e-55 qcov:98.60 identity:74.30;
tigrfam_acc TIGR04191;
tigrfam_desc putative bacilliredoxin, YphP/YqiW family;
tigrfam_name YphP_YqiW;
tigrfam_target db:TIGRFAMs.hmm|TIGR04191 evalue:3.3e-58 score:194.8 best_domain_score:194.7 name:TIGR04191;
60019 60384 CDS
ID metaerg.pl|01903
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582933.1 1 121 evalue:5.5e-60 qcov:100.00 identity:99.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
60454 60528 tRNA
ID metaerg.pl|01904
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
name tRNA_Arg_tcg;
61050 62027 CDS
ID metaerg.pl|01905
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582931.1 1 324 evalue:1.7e-164 qcov:99.70 identity:96.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF06081; PF11728;
pfam_desc Aromatic acid exporter family member 1; Putative aromatic acid exporter C-terminal domain;
pfam_id ArAE_1; ArAE_1_C;
pfam_target db:Pfam-A.hmm|PF06081.11 evalue:2.7e-48 score:163.0 best_domain_score:162.5 name:ArAE_1; db:Pfam-A.hmm|PF11728.8 evalue:7.5e-55 score:184.7 best_domain_score:184.4 name:ArAE_1_C;
sprot_desc hypothetical protein;
sprot_id sp|P54538|YQJA_BACSU;
sprot_target db:uniprot_sprot|sp|P54538|YQJA_BACSU 4 316 evalue:2.0e-87 qcov:96.30 identity:54.00;
tm_num 4;
61050 62027 transmembrane_helix
ID metaerg.pl|01906
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o61092-61160i61221-61325o61335-61388i61407-61475o;
62377 64020 CDS
ID metaerg.pl|01907
allec_ids 5.4.99.2; 5.4.99.-;
allgo_ids GO:0016866; GO:0031419; GO:0046872; GO:0004494;
allko_ids K01849; K01848; K11942; K01847; K14447;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582929.1 1 547 evalue:1.5e-301 qcov:100.00 identity:98.20;
kegg_pathway_id 00280; 00640;
kegg_pathway_name Valine, leucine and isoleucine degradation; Propanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id RIBOKIN-PWY; PWY-5743; PROPIONMET-PWY; PWY-6008; PWY-112; PWY-6005; PWY-5789; PWY-5377; PWY-5328; P108-PWY; PWY-6115; PWY-5672; PWY-5992; PWY0-43; PWY-5130; PWY-6109; PWY-5203;
metacyc_pathway_name ribose phosphorylation;; 3-hydroxypropanoate cycle;; propanoyl CoA degradation I;; baruol biosynthesis;; lupeol biosynthesis;; marneral biosynthesis;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; α-amyrin biosynthesis;; superpathway of L-methionine salvage and degradation;; pyruvate fermentation to propanoate I;; ; ginsenosides biosynthesis;; thalianol and derivatives biosynthesis;; conversion of succinate to propanoate;; 2-oxobutanoate degradation I;; mangrove triterpenoid biosynthesis;; soybean saponin I biosynthesis;;
metacyc_pathway_type Sugars-And-Polysaccharides-Degradation;; Autotrophic-CO2-Fixation;; Propionate-Degradation;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; Autotrophic-CO2-Fixation;; TRITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; Pyruvate-Propanoate-Fermentation;; ; TRITERPENOID-SYN;; TRITERPENOID-SYN;; SUCC-DEG;; 2-Oxobutanoate-Degradation; Super-Pathways;; TRITERPENOID-SYN;; TRITERPENOID-SYN;;
pfam_acc PF01642;
pfam_desc Methylmalonyl-CoA mutase;
pfam_id MM_CoA_mutase;
pfam_target db:Pfam-A.hmm|PF01642.22 evalue:3.5e-225 score:747.6 best_domain_score:747.4 name:MM_CoA_mutase;
sprot_desc Methylmalonyl-CoA mutase;
sprot_id sp|P27253|SCPA_ECOLI;
sprot_target db:uniprot_sprot|sp|P27253|SCPA_ECOLI 11 545 evalue:4.3e-135 qcov:97.80 identity:49.20;
tigrfam_acc TIGR00641;
tigrfam_desc methylmalonyl-CoA mutase N-terminal domain;
tigrfam_name acid_CoA_mut_N;
tigrfam_target db:TIGRFAMs.hmm|TIGR00641 evalue:1.2e-239 score:795.1 best_domain_score:794.9 name:TIGR00641;
64035 64880 CDS
ID metaerg.pl|01908
allec_ids 5.1.99.1;
allgo_ids GO:0031419; GO:0046872;
allko_ids K14447; K01844; K01847; K01759; K11942; K00548; K01849; K01848;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582927.1 1 281 evalue:9.9e-153 qcov:100.00 identity:98.60;
kegg_pathway_id 00670; 00640; 00620; 00310; 04011; 00280; 00271;
kegg_pathway_name One carbon pool by folate; Propanoate metabolism; Pyruvate metabolism; Lysine degradation; MAPK signaling pathway - yeast; Valine, leucine and isoleucine degradation; Methionine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5789; PWY-5130; PWY-5743; P108-PWY; PROPIONMET-PWY; PWY-5328;
metacyc_pathway_name 3-hydroxypropanoate/4-hydroxybutanate cycle;; 2-oxobutanoate degradation I;; 3-hydroxypropanoate cycle;; pyruvate fermentation to propanoate I;; propanoyl CoA degradation I;; superpathway of L-methionine salvage and degradation;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; 2-Oxobutanoate-Degradation; Super-Pathways;; Autotrophic-CO2-Fixation;; Pyruvate-Propanoate-Fermentation;; Propionate-Degradation;; METHIONINE-DEG; Super-Pathways;;
pfam_acc PF02310; PF00903; PF13468; PF13669;
pfam_desc B12 binding domain; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase-like domain; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id B12-binding; Glyoxalase; Glyoxalase_3; Glyoxalase_4;
pfam_target db:Pfam-A.hmm|PF02310.19 evalue:6.3e-22 score:77.1 best_domain_score:76.3 name:B12-binding; db:Pfam-A.hmm|PF00903.25 evalue:2.2e-10 score:40.0 best_domain_score:38.9 name:Glyoxalase; db:Pfam-A.hmm|PF13468.6 evalue:5.3e-08 score:32.4 best_domain_score:31.4 name:Glyoxalase_3; db:Pfam-A.hmm|PF13669.6 evalue:2.8e-22 score:78.3 best_domain_score:76.2 name:Glyoxalase_4;
tigrfam_acc TIGR00640; TIGR03081;
tigrfam_desc methylmalonyl-CoA mutase C-terminal domain; methylmalonyl-CoA epimerase;
tigrfam_name acid_CoA_mut_C; metmalonyl_epim;
tigrfam_target db:TIGRFAMs.hmm|TIGR00640 evalue:1.1e-48 score:163.6 best_domain_score:162.9 name:TIGR00640; db:TIGRFAMs.hmm|TIGR03081 evalue:6.5e-46 score:155.2 best_domain_score:154.0 name:TIGR03081;
64867 66414 CDS
ID metaerg.pl|01909
allec_ids 6.4.1.3;
allgo_ids GO:0009317; GO:0003989; GO:0005524; GO:0004658; GO:0006633;
allko_ids K01959; K01571; K01966; K15036; K01963; K03416;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582925.1 1 515 evalue:2.6e-292 qcov:100.00 identity:99.00;
kegg_pathway_id 00061; 00640; 00253; 00252; 00330; 00620; 00020; 00280;
kegg_pathway_name Fatty acid biosynthesis; Propanoate metabolism; Tetracycline biosynthesis; Alanine and aspartate metabolism; Arginine and proline metabolism; Pyruvate metabolism; Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5743; PWY-5130; PWY-5328; PROPIONMET-PWY; PWY-6113; PWYG-321; PWY-5789;
metacyc_pathway_name 3-hydroxypropanoate cycle;; 2-oxobutanoate degradation I;; superpathway of L-methionine salvage and degradation;; propanoyl CoA degradation I;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; 3-hydroxypropanoate/4-hydroxybutanate cycle;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; 2-Oxobutanoate-Degradation; Super-Pathways;; METHIONINE-DEG; Super-Pathways;; Propionate-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Autotrophic-CO2-Fixation;;
pfam_acc PF01039;
pfam_desc Carboxyl transferase domain;
pfam_id Carboxyl_trans;
pfam_target db:Pfam-A.hmm|PF01039.22 evalue:8.7e-195 score:647.3 best_domain_score:647.1 name:Carboxyl_trans;
sprot_desc Putative propionyl-CoA carboxylase beta chain;
sprot_id sp|P54541|PCCB_BACSU;
sprot_target db:uniprot_sprot|sp|P54541|PCCB_BACSU 3 515 evalue:5.8e-182 qcov:99.60 identity:61.60;
66470 67582 CDS
ID metaerg.pl|01910
allgo_ids GO:0016787; GO:0046872; GO:0008237;
allko_ids K01258;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582923.1 1 369 evalue:4.7e-187 qcov:99.70 identity:93.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF07687; PF01546; PF04389; PF05343;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40; Peptidase family M28; M42 glutamyl aminopeptidase;
pfam_id M20_dimer; Peptidase_M20; Peptidase_M28; Peptidase_M42;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:1.3e-15 score:56.4 best_domain_score:56.4 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:1.5e-24 score:86.1 best_domain_score:85.4 name:Peptidase_M20; db:Pfam-A.hmm|PF04389.17 evalue:5.7e-13 score:48.2 best_domain_score:42.7 name:Peptidase_M28; db:Pfam-A.hmm|PF05343.14 evalue:7.2e-16 score:57.3 best_domain_score:31.9 name:Peptidase_M42;
sprot_desc hypothetical protein;
sprot_id sp|P54542|YQJE_BACSU;
sprot_target db:uniprot_sprot|sp|P54542|YQJE_BACSU 1 368 evalue:1.2e-133 qcov:99.50 identity:66.80;
tigrfam_acc TIGR01883;
tigrfam_desc peptidase T-like protein;
tigrfam_name PepT-like;
tigrfam_target db:TIGRFAMs.hmm|TIGR01883 evalue:1.5e-147 score:490.5 best_domain_score:490.3 name:TIGR01883;
67966 67772 CDS
ID metaerg.pl|01911
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582920.1 1 64 evalue:5.2e-25 qcov:100.00 identity:92.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
68156 69343 CDS
ID metaerg.pl|01912
allec_ids 2.7.7.7;
allgo_ids GO:0006281; GO:0005737; GO:0003684; GO:0003887; GO:0000287; GO:0006261; GO:0042276; GO:0009432; GO:0019985;
allko_ids K03515; K02346;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582917.1 1 391 evalue:4.2e-210 qcov:99.00 identity:93.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00817; PF11799;
pfam_desc impB/mucB/samB family; impB/mucB/samB family C-terminal domain;
pfam_id IMS; IMS_C;
pfam_target db:Pfam-A.hmm|PF00817.20 evalue:2.2e-46 score:156.8 best_domain_score:156.2 name:IMS; db:Pfam-A.hmm|PF11799.8 evalue:5.8e-20 score:71.4 best_domain_score:70.4 name:IMS_C;
sprot_desc DNA polymerase IV 1;
sprot_id sp|P54545|DPO41_BACSU;
sprot_target db:uniprot_sprot|sp|P54545|DPO41_BACSU 4 385 evalue:1.4e-111 qcov:96.70 identity:54.70;
69488 69916 CDS
ID metaerg.pl|01913
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582915.1 1 142 evalue:1.8e-70 qcov:100.00 identity:88.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
70571 70125 CDS
ID metaerg.pl|01914
allko_ids K01697; K05847; K00088; K02806;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582913.1 1 147 evalue:3.4e-72 qcov:99.30 identity:96.60;
kegg_pathway_id 00260; 00230; 02060; 00983; 02010; 00271; 00450;
kegg_pathway_name Glycine, serine and threonine metabolism; Purine metabolism; Phosphotransferase system (PTS); Drug metabolism - other enzymes; ABC transporters - General; Methionine metabolism; Selenoamino acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00571;
pfam_desc CBS domain;
pfam_id CBS;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:5.1e-15 score:54.9 best_domain_score:27.6 name:CBS;
sprot_desc CBS domain-containing protein YkuL;
sprot_id sp|O31698|YKUL_BACSU;
sprot_target db:uniprot_sprot|sp|O31698|YKUL_BACSU 8 146 evalue:5.4e-24 qcov:93.90 identity:44.60;
71097 70792 CDS
ID metaerg.pl|01915
allgo_ids GO:0003677; GO:0006355; GO:0005886; GO:0001047; GO:0043562; GO:0090294;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582911.1 1 101 evalue:1.7e-46 qcov:100.00 identity:98.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00376; PF13411;
pfam_desc MerR family regulatory protein; MerR HTH family regulatory protein;
pfam_id MerR; MerR_1;
pfam_target db:Pfam-A.hmm|PF00376.23 evalue:2.9e-11 score:42.2 best_domain_score:41.5 name:MerR; db:Pfam-A.hmm|PF13411.6 evalue:3.6e-14 score:51.9 best_domain_score:51.4 name:MerR_1;
sprot_desc HTH-type transcriptional regulator TnrA;
sprot_id sp|Q45666|TNRA_BACSU;
sprot_target db:uniprot_sprot|sp|Q45666|TNRA_BACSU 6 100 evalue:3.2e-28 qcov:94.10 identity:68.60;
72007 71198 CDS
ID metaerg.pl|01916
allgo_ids GO:0005216; GO:0006811; GO:0016020; GO:0055085; GO:0005891; GO:0046872; GO:0005245; GO:0034765;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582909.1 1 269 evalue:2.1e-136 qcov:100.00 identity:96.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00520; PF08016;
pfam_desc Ion transport protein; Polycystin cation channel;
pfam_id Ion_trans; PKD_channel;
pfam_target db:Pfam-A.hmm|PF00520.31 evalue:4.6e-45 score:153.0 best_domain_score:152.8 name:Ion_trans; db:Pfam-A.hmm|PF08016.12 evalue:3.8e-06 score:25.1 best_domain_score:24.5 name:PKD_channel;
sprot_desc Muscle calcium channel subunit alpha-1;
sprot_id sp|Q25452|CAC1M_MUSDO;
sprot_target db:uniprot_sprot|sp|Q25452|CAC1M_MUSDO 5 227 evalue:7.3e-11 qcov:82.90 identity:24.90;
tm_num 5;
72007 71198 transmembrane_helix
ID metaerg.pl|01917
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o71255-71311i71372-71440o71468-71536i71615-71683o71801-71869i;
73127 72297 CDS
ID metaerg.pl|01918
allec_ids 1.5.1.2;
allgo_ids GO:0005737; GO:0004735; GO:0055129;
allko_ids K00286;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582907.1 1 276 evalue:2.2e-136 qcov:100.00 identity:92.80;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-4981; PWY-3341; ARGORNPROST-PWY; ARG-PRO-PWY; PROSYN-PWY;
metacyc_pathway_name L-proline biosynthesis II (from arginine);; L-proline biosynthesis III;; L-arginine degradation (Stickland reaction);; L-arginine degradation VI (arginase 2 pathway);; L-proline biosynthesis I;;
metacyc_pathway_type PROLINE-SYN;; PROLINE-SYN;; ARGININE-DEG; Super-Pathways;; ARGININE-DEG; PROLINE-SYN;; PROLINE-SYN;;
pfam_acc PF02558; PF03807; PF14748;
pfam_desc Ketopantoate reductase PanE/ApbA; NADP oxidoreductase coenzyme F420-dependent; Pyrroline-5-carboxylate reductase dimerisation;
pfam_id ApbA; F420_oxidored; P5CR_dimer;
pfam_target db:Pfam-A.hmm|PF02558.16 evalue:4.6e-06 score:25.6 best_domain_score:24.6 name:ApbA; db:Pfam-A.hmm|PF03807.17 evalue:5.6e-19 score:67.8 best_domain_score:66.6 name:F420_oxidored; db:Pfam-A.hmm|PF14748.6 evalue:6.6e-32 score:109.1 best_domain_score:109.1 name:P5CR_dimer;
sprot_desc Pyrroline-5-carboxylate reductase 2;
sprot_id sp|P54552|P5CR2_BACSU;
sprot_target db:uniprot_sprot|sp|P54552|P5CR2_BACSU 2 264 evalue:8.2e-50 qcov:95.30 identity:41.70;
tigrfam_acc TIGR00112;
tigrfam_desc pyrroline-5-carboxylate reductase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name proC;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00112 evalue:7.6e-79 score:264.2 best_domain_score:264.0 name:TIGR00112;
73270 74058 CDS
ID metaerg.pl|01919
allec_ids 1.-.-.-;
allgo_ids GO:0016491;
allko_ids K12420; K07124;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582905.1 1 262 evalue:3.5e-128 qcov:100.00 identity:90.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987; PWY-2821; PWY-5826; PWY-4302; PWY-5271;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;;
pfam_acc PF00106; PF13561; PF08643; PF08659; PF02719;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; Fungal family of unknown function (DUF1776); KR domain; Polysaccharide biosynthesis protein;
pfam_id adh_short; adh_short_C2; DUF1776; KR; Polysacc_synt_2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:6.4e-53 score:178.3 best_domain_score:177.9 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:1.3e-38 score:132.1 best_domain_score:131.7 name:adh_short_C2; db:Pfam-A.hmm|PF08643.10 evalue:8.2e-06 score:24.6 best_domain_score:23.3 name:DUF1776; db:Pfam-A.hmm|PF08659.10 evalue:1.6e-16 score:59.9 best_domain_score:59.5 name:KR; db:Pfam-A.hmm|PF02719.15 evalue:9.4e-07 score:27.5 best_domain_score:26.8 name:Polysacc_synt_2;
sprot_desc Uncharacterized oxidoreductase YqjQ;
sprot_id sp|P54554|YQJQ_BACSU;
sprot_target db:uniprot_sprot|sp|P54554|YQJQ_BACSU 3 262 evalue:4.6e-58 qcov:99.20 identity:47.70;
74081 74548 CDS
ID metaerg.pl|01920
allec_ids 3.1.3.48;
allgo_ids GO:0004725;
allko_ids K01104;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582903.1 1 155 evalue:2.9e-74 qcov:100.00 identity:89.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01451;
pfam_desc Low molecular weight phosphotyrosine protein phosphatase;
pfam_id LMWPc;
pfam_target db:Pfam-A.hmm|PF01451.21 evalue:3.2e-33 score:114.3 best_domain_score:114.2 name:LMWPc;
sprot_desc Low molecular weight protein-tyrosine-phosphatase YfkJ;
sprot_id sp|O35016|YFKJ_BACSU;
sprot_target db:uniprot_sprot|sp|O35016|YFKJ_BACSU 1 155 evalue:3.4e-37 qcov:100.00 identity:49.40;
74692 75681 CDS
ID metaerg.pl|01921
allgo_ids GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582901.1 1 329 evalue:2.2e-175 qcov:100.00 identity:93.60;
kegg_pathway_id 00380; 00150; 00340; 00350; 00450; 00626;
kegg_pathway_name Tryptophan metabolism; Androgen and estrogen metabolism; Histidine metabolism; Tyrosine metabolism; Selenoamino acid metabolism; Naphthalene and anthracene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01739; PF02353; PF08241; PF08242; PF00891; PF13489; PF13649; PF13847; PF02390; PF05401;
pfam_desc CheR methyltransferase, SAM binding domain; Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; O-methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Putative methyltransferase ; Nodulation protein S (NodS);
pfam_id CheR; CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_2; Methyltransf_23; Methyltransf_25; Methyltransf_31; Methyltransf_4; NodS;
pfam_target db:Pfam-A.hmm|PF01739.18 evalue:4e-08 score:32.2 best_domain_score:30.4 name:CheR; db:Pfam-A.hmm|PF02353.20 evalue:1.1e-09 score:37.2 best_domain_score:35.7 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:2.4e-12 score:46.5 best_domain_score:44.8 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:7.9e-11 score:41.8 best_domain_score:40.9 name:Methyltransf_12; db:Pfam-A.hmm|PF00891.18 evalue:3.6e-11 score:42.0 best_domain_score:41.4 name:Methyltransf_2; db:Pfam-A.hmm|PF13489.6 evalue:1.3e-11 score:43.8 best_domain_score:41.3 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:2.9e-14 score:52.8 best_domain_score:51.6 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:2.3e-12 score:46.2 best_domain_score:45.4 name:Methyltransf_31; db:Pfam-A.hmm|PF02390.17 evalue:3.9e-06 score:25.7 best_domain_score:23.0 name:Methyltransf_4; db:Pfam-A.hmm|PF05401.11 evalue:0.00016 score:20.6 best_domain_score:19.9 name:NodS;
75832 77322 CDS
ID metaerg.pl|01922
allec_ids 1.3.8.2; 1.14.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0102223; GO:0016117;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582899.1 1 496 evalue:3.9e-277 qcov:100.00 identity:94.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5944; PWY-762; PWY-6287; PWY-782; PWY-5947; PWY-5942; PWY-5362; PWY-5367; TOLSULFDEG-PWY; PWY-5288; PWY-5175; PWY-5366; PWY-5987; CAROTENOID-PWY; PWY-6475; PWY-5397; 4TOLCARBDEG-PWY;
metacyc_pathway_name zeaxanthin biosynthesis;; phospholipid desaturation;; neurosporene biosynthesis;; glycolipid desaturation;; lutein biosynthesis;; trans-lycopene biosynthesis I;; sapienate biosynthesis;; petroselinate biosynthesis;; 4-toluenesulfonate degradation I;; astaxanthin biosynthesis (bacteria, fungi, algae);; lactucaxanthin biosynthesis;; palmitoleate biosynthesis II (plants and bacteria);; sorgoleone biosynthesis;; superpathway of carotenoid biosynthesis in plants;; trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria);; crocetin biosynthesis;; 4-toluenecarboxylate degradation;;
metacyc_pathway_type C40-Carotenoids-Biosynthesis;; Phospholipid-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Glycolipids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Lycopene-Biosynthesis; Super-Pathways;; Unsaturated-Fatty-Acids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; 4-Toluenesulfonate-Degradation;; C40-Carotenoids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Palmitoleate-Biosynthesis;; QUINONE-SYN;; C40-Carotenoids-Biosynthesis; Super-Pathways;; Lycopene-Biosynthesis;; APOCAROTENOID-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;;
pfam_acc PF01593; PF01266; PF00890; PF01494; PF03486; PF13450; PF00070; PF07992;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; FAD binding domain; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; DAO; FAD_binding_2; FAD_binding_3; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:1e-25 score:90.2 best_domain_score:89.7 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:2.7e-10 score:39.6 best_domain_score:34.6 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:8e-05 score:21.1 best_domain_score:19.8 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:1.9e-05 score:23.3 best_domain_score:22.4 name:FAD_binding_3; db:Pfam-A.hmm|PF03486.14 evalue:2e-07 score:29.3 best_domain_score:20.4 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:2.2e-17 score:62.3 best_domain_score:60.8 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:8.2e-05 score:22.3 best_domain_score:10.5 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:3.4e-09 score:35.6 best_domain_score:22.2 name:Pyr_redox_2;
sp YES;
sprot_desc 4,4'-diapophytoene desaturase (4,4'-diapolycopene-forming);
sprot_id sp|Q4VKV1|CRTN_METSP;
sprot_target db:uniprot_sprot|sp|Q4VKV1|CRTN_METSP 4 486 evalue:1.1e-134 qcov:97.40 identity:46.20;
tigrfam_acc TIGR02734;
tigrfam_desc phytoene desaturase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name crtI_fam;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02734 evalue:1.7e-144 score:481.4 best_domain_score:481.2 name:TIGR02734;
75832 75903 signal_peptide
ID metaerg.pl|01923
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
77319 78776 CDS
ID metaerg.pl|01924
allec_ids 1.2.99.10; 1.14.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0016117;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582897.1 1 485 evalue:1.8e-266 qcov:100.00 identity:94.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5367; PWY-5362; PWY-5942; PWY-5947; PWY-782; PWY-762; PWY-6287; PWY-5944; PWY-5397; 4TOLCARBDEG-PWY; CAROTENOID-PWY; PWY-6475; PWY-5175; PWY-5987; PWY-5366; PWY-5288; TOLSULFDEG-PWY;
metacyc_pathway_name petroselinate biosynthesis;; sapienate biosynthesis;; trans-lycopene biosynthesis I;; lutein biosynthesis;; glycolipid desaturation;; phospholipid desaturation;; neurosporene biosynthesis;; zeaxanthin biosynthesis;; crocetin biosynthesis;; 4-toluenecarboxylate degradation;; superpathway of carotenoid biosynthesis in plants;; trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria);; lactucaxanthin biosynthesis;; sorgoleone biosynthesis;; palmitoleate biosynthesis II (plants and bacteria);; astaxanthin biosynthesis (bacteria, fungi, algae);; 4-toluenesulfonate degradation I;;
metacyc_pathway_type Unsaturated-Fatty-Acids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Lycopene-Biosynthesis; Super-Pathways;; C40-Carotenoids-Biosynthesis;; Glycolipids-Biosynthesis;; Phospholipid-Biosynthesis;; C40-Carotenoids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; APOCAROTENOID-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;; C40-Carotenoids-Biosynthesis; Super-Pathways;; Lycopene-Biosynthesis;; C40-Carotenoids-Biosynthesis;; QUINONE-SYN;; Palmitoleate-Biosynthesis;; C40-Carotenoids-Biosynthesis;; 4-Toluenesulfonate-Degradation;;
pfam_acc PF01593; PF01266; PF00890; PF03486; PF13450; PF00070; PF07992;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; DAO; FAD_binding_2; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:4e-23 score:81.6 best_domain_score:79.3 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:1.2e-07 score:30.9 best_domain_score:29.4 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:7.3e-09 score:34.4 best_domain_score:16.5 name:FAD_binding_2; db:Pfam-A.hmm|PF03486.14 evalue:5.2e-06 score:24.6 best_domain_score:15.2 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:1.7e-08 score:33.8 best_domain_score:32.7 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:4.5e-05 score:23.2 best_domain_score:18.6 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:9e-07 score:27.6 best_domain_score:13.4 name:Pyr_redox_2;
sprot_desc 4,4'-diapolycopen-4-al dehydrogenase;
sprot_id sp|P0DPE9|CRTNC_BACID;
sprot_target db:uniprot_sprot|sp|P0DPE9|CRTNC_BACID 1 474 evalue:3.6e-125 qcov:97.70 identity:47.30;
tigrfam_acc TIGR02734;
tigrfam_desc phytoene desaturase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name crtI_fam;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02734 evalue:2.5e-92 score:309.3 best_domain_score:309.1 name:TIGR02734;
78836 79678 CDS
ID metaerg.pl|01925
allec_ids 2.5.1.32;
allgo_ids GO:0004310; GO:0016767; GO:0046872; GO:0051996; GO:0016117; GO:0006696;
allko_ids K02291;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583252.1 1 280 evalue:4.9e-152 qcov:100.00 identity:94.60;
kegg_pathway_id 00906;
kegg_pathway_name Carotenoid biosynthesis - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id CAROTENOID-PWY; PWY-6475; PWY-5942; PWY-6287;
metacyc_pathway_name superpathway of carotenoid biosynthesis in plants;; trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria);; trans-lycopene biosynthesis I;; neurosporene biosynthesis;;
metacyc_pathway_type C40-Carotenoids-Biosynthesis; Super-Pathways;; Lycopene-Biosynthesis;; Lycopene-Biosynthesis; Super-Pathways;; C40-Carotenoids-Biosynthesis;;
pfam_acc PF00494;
pfam_desc Squalene/phytoene synthase;
pfam_id SQS_PSY;
pfam_target db:Pfam-A.hmm|PF00494.19 evalue:8.4e-70 score:234.5 best_domain_score:234.3 name:SQS_PSY;
sprot_desc 15-cis-phytoene synthase;
sprot_id sp|P37294|CRTB_SYNY3;
sprot_target db:uniprot_sprot|sp|P37294|CRTB_SYNY3 3 269 evalue:1.1e-44 qcov:95.40 identity:38.10;
81455 79986 CDS
ID metaerg.pl|01926
allec_ids 1.14.99.44; 1.14.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0016117;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582893.1 1 489 evalue:9.8e-257 qcov:100.00 identity:90.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-782; PWY-762; PWY-6287; PWY-5944; PWY-5367; PWY-5362; PWY-5942; PWY-5947; PWY-5288; TOLSULFDEG-PWY; PWY-5397; 4TOLCARBDEG-PWY; PWY-6475; CAROTENOID-PWY; PWY-5175; PWY-5366; PWY-5987;
metacyc_pathway_name glycolipid desaturation;; phospholipid desaturation;; neurosporene biosynthesis;; zeaxanthin biosynthesis;; petroselinate biosynthesis;; sapienate biosynthesis;; trans-lycopene biosynthesis I;; lutein biosynthesis;; astaxanthin biosynthesis (bacteria, fungi, algae);; 4-toluenesulfonate degradation I;; crocetin biosynthesis;; 4-toluenecarboxylate degradation;; trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria);; superpathway of carotenoid biosynthesis in plants;; lactucaxanthin biosynthesis;; palmitoleate biosynthesis II (plants and bacteria);; sorgoleone biosynthesis;;
metacyc_pathway_type Glycolipids-Biosynthesis;; Phospholipid-Biosynthesis;; C40-Carotenoids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Lycopene-Biosynthesis; Super-Pathways;; C40-Carotenoids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; 4-Toluenesulfonate-Degradation;; APOCAROTENOID-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;; Lycopene-Biosynthesis;; C40-Carotenoids-Biosynthesis; Super-Pathways;; C40-Carotenoids-Biosynthesis;; Palmitoleate-Biosynthesis;; QUINONE-SYN;;
pfam_acc PF01593; PF01266; PF00890; PF03486; PF13450; PF00070; PF07992;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; DAO; FAD_binding_2; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:1.4e-20 score:73.2 best_domain_score:71.5 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:1e-10 score:41.0 best_domain_score:24.9 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:4.1e-09 score:35.2 best_domain_score:32.5 name:FAD_binding_2; db:Pfam-A.hmm|PF03486.14 evalue:6.5e-07 score:27.6 best_domain_score:22.1 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:3.7e-14 score:51.9 best_domain_score:49.1 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:1.4e-06 score:28.0 best_domain_score:17.3 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:5e-09 score:35.0 best_domain_score:27.5 name:Pyr_redox_2;
sprot_desc 4,4'-diapolycopene oxygenase;
sprot_id sp|Q4VKU9|CRTP_METSP;
sprot_target db:uniprot_sprot|sp|Q4VKU9|CRTP_METSP 3 484 evalue:8.8e-71 qcov:98.60 identity:32.60;
tigrfam_acc TIGR02734;
tigrfam_desc phytoene desaturase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name crtI_fam;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02734 evalue:9.2e-101 score:337.1 best_domain_score:337.0 name:TIGR02734;
82543 81452 CDS
ID metaerg.pl|01927
allgo_ids GO:0016757;
allko_ids K00698; K12997; K00721; K00694; K00729;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582891.1 1 363 evalue:7.9e-187 qcov:100.00 identity:91.20;
kegg_pathway_id 00530; 00500; 00510;
kegg_pathway_name Aminosugars metabolism; Starch and sucrose metabolism; N-Glycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00535; PF13641; PF13506;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family 21;
pfam_id Glycos_transf_2; Glyco_tranf_2_3; Glyco_transf_21;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.6e-19 score:69.6 best_domain_score:69.1 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:1.3e-15 score:57.2 best_domain_score:56.3 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13506.6 evalue:1.6e-19 score:69.3 best_domain_score:68.7 name:Glyco_transf_21;
sp YES;
tm_num 3;
81452 81514 signal_peptide
ID metaerg.pl|01928
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
82543 81452 transmembrane_helix
ID metaerg.pl|01929
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o82268-82336i82355-82414o82427-82495i;
83256 82540 CDS
ID metaerg.pl|01930
allgo_ids GO:0016746;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582889.1 1 238 evalue:4.6e-127 qcov:100.00 identity:92.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01553;
pfam_desc Acyltransferase;
pfam_id Acyltransferase;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:1.1e-11 score:43.8 best_domain_score:43.2 name:Acyltransferase;
84041 83253 CDS
ID metaerg.pl|01931
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582887.1 1 262 evalue:1.7e-135 qcov:100.00 identity:94.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF04240;
pfam_desc Carotenoid biosynthesis protein;
pfam_id Caroten_synth;
pfam_target db:Pfam-A.hmm|PF04240.12 evalue:1.4e-42 score:145.1 best_domain_score:145.1 name:Caroten_synth;
tm_num 8;
84041 83253 transmembrane_helix
ID metaerg.pl|01932
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i83271-83339o83349-83417i83436-83504o83547-83615i83652-83720o83784-83843i83892-83945o83955-84008i;
84290 85174 CDS
ID metaerg.pl|01933
allec_ids 3.1.3.-;
allgo_ids GO:0005829; GO:0000287; GO:0016791;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582884.1 1 294 evalue:9.1e-141 qcov:100.00 identity:90.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id NADPHOS-DEPHOS-PWY; PWY-6456; PWY-5491; PWY-882; PWY-5083;
metacyc_pathway_name NAD phosphorylation and dephosphorylation;; serinol biosynthesis;; diethylphosphate degradation;; L-ascorbate biosynthesis I (L-galactose pathway);; NAD/NADH phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; Polyamine-Biosynthesis;; Phosphorus-Compounds;; Ascorbate-Biosynthesis;; NAD-Metabolism;;
pfam_acc PF00702; PF08282; PF05116;
pfam_desc haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase;
pfam_id Hydrolase; Hydrolase_3; S6PP;
pfam_target db:Pfam-A.hmm|PF00702.26 evalue:1e-09 score:38.2 best_domain_score:29.3 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:1.3e-60 score:204.5 best_domain_score:204.1 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:1.4e-15 score:56.8 best_domain_score:28.9 name:S6PP;
sprot_desc Phosphatase YwpJ;
sprot_id sp|P94592|YWPJ_BACSU;
sprot_target db:uniprot_sprot|sp|P94592|YWPJ_BACSU 5 286 evalue:4.7e-35 qcov:95.90 identity:34.00;
tigrfam_acc TIGR00099; TIGR01484;
tigrfam_desc Cof-like hydrolase; HAD hydrolase, family IIB;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name Cof-subfamily; HAD-SF-IIB;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00099 evalue:1.1e-53 score:181.6 best_domain_score:181.0 name:TIGR00099; db:TIGRFAMs.hmm|TIGR01484 evalue:1e-24 score:87.0 best_domain_score:84.1 name:TIGR01484;
85373 85849 CDS
ID metaerg.pl|01934
allgo_ids GO:0009401; GO:0005737; GO:0016301; GO:0046872;
allko_ids K02755; K02808; K02753; K02777; K02818; K02819; K02756; K02749; K01803; K02757; K11191; K02803; K02763; K02804; K02765; K02809; K02802; K02768; K02764; K02779; K11192; K02791; K02817; K02752; K02750; K02790; K02778; K02810; K08483;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582882.1 1 158 evalue:1.6e-80 qcov:100.00 identity:98.70;
kegg_pathway_id 02060; 00010; 00710; 00051;
kegg_pathway_name Phosphotransferase system (PTS); Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Fructose and mannose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00358;
pfam_desc phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1;
pfam_id PTS_EIIA_1;
pfam_target db:Pfam-A.hmm|PF00358.20 evalue:2.6e-53 score:178.4 best_domain_score:178.4 name:PTS_EIIA_1;
sprot_desc PTS system glucose-specific EIIA component;
sprot_id sp|Q9KCQ4|PTGA_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KCQ4|PTGA_BACHD 7 155 evalue:2.2e-47 qcov:94.30 identity:60.40;
tigrfam_acc TIGR00830;
tigrfam_desc PTS system, glucose subfamily, IIA component;
tigrfam_mainrole Signal transduction;
tigrfam_name PTBA;
tigrfam_sub1role PTS;
tigrfam_target db:TIGRFAMs.hmm|TIGR00830 evalue:1.2e-47 score:160.0 best_domain_score:160.0 name:TIGR00830;
86956 86126 CDS
ID metaerg.pl|01935
allec_ids 3.6.1.27;
allgo_ids GO:0016020; GO:0016311; GO:0050380; GO:0016021; GO:0005886; GO:0071555; GO:0009252; GO:0008360; GO:0046677;
allko_ids K06153;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582880.1 1 276 evalue:1.7e-141 qcov:100.00 identity:97.50;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF02673;
pfam_desc Bacitracin resistance protein BacA;
pfam_id BacA;
pfam_target db:Pfam-A.hmm|PF02673.18 evalue:2e-71 score:240.0 best_domain_score:239.7 name:BacA;
sprot_desc Undecaprenyl-diphosphatase 2;
sprot_id sp|Q9KCP8|UPPP2_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KCP8|UPPP2_BACHD 1 276 evalue:8.7e-84 qcov:100.00 identity:60.30;
tm_num 7;
86956 86126 transmembrane_helix
ID metaerg.pl|01936
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i86144-86212o86270-86338i86372-86440o86468-86524i86681-86749o86792-86860i86879-86947o;
87087 87287 CDS
ID metaerg.pl|01937
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
87360 88007 CDS
ID metaerg.pl|01938
allgo_ids GO:0016209; GO:0016491; GO:0055114;
allko_ids K11065; K03564; K03386; K12267;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582878.1 1 215 evalue:5.8e-113 qcov:100.00 identity:94.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00578; PF08534; PF00085; PF13905;
pfam_desc AhpC/TSA family; Redoxin; Thioredoxin; Thioredoxin-like;
pfam_id AhpC-TSA; Redoxin; Thioredoxin; Thioredoxin_8;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:5.2e-27 score:93.5 best_domain_score:93.0 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:1.1e-20 score:73.1 best_domain_score:72.6 name:Redoxin; db:Pfam-A.hmm|PF00085.20 evalue:1.2e-07 score:30.9 best_domain_score:28.5 name:Thioredoxin; db:Pfam-A.hmm|PF13905.6 evalue:6.9e-14 score:51.2 best_domain_score:50.6 name:Thioredoxin_8;
sp YES;
tm_num 1;
87360 87416 signal_peptide
ID metaerg.pl|01939
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
87360 88007 transmembrane_helix
ID metaerg.pl|01940
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i87372-87431o;
89251 88340 CDS
ID metaerg.pl|01941
allec_ids 1.-.-.-;
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582876.1 1 303 evalue:5.6e-162 qcov:100.00 identity:94.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5826; PWY-2821; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5987; PWY-5479;
metacyc_pathway_name hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;;
pfam_acc PF00248;
pfam_desc Aldo/keto reductase family;
pfam_id Aldo_ket_red;
pfam_target db:Pfam-A.hmm|PF00248.21 evalue:5.5e-66 score:222.0 best_domain_score:221.8 name:Aldo_ket_red;
sp YES;
sprot_desc Uncharacterized oxidoreductase YqkF;
sprot_id sp|P54569|YQKF_BACSU;
sprot_target db:uniprot_sprot|sp|P54569|YQKF_BACSU 1 302 evalue:3.5e-86 qcov:99.70 identity:51.80;
88340 88396 lipoprotein_signal_peptide
ID metaerg.pl|01942
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
89408 89965 CDS
ID metaerg.pl|01943
allec_ids 3.6.1.13;
allgo_ids GO:0016787; GO:0005829; GO:0047631; GO:0046872; GO:0006753; GO:0019693;
allko_ids K03574; K08310; K01515;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582874.1 1 178 evalue:1.2e-87 qcov:96.20 identity:92.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:2.3e-19 score:68.9 best_domain_score:68.5 name:NUDIX;
sprot_desc ADP-ribose pyrophosphatase;
sprot_id sp|P54570|ADPP_BACSU;
sprot_target db:uniprot_sprot|sp|P54570|ADPP_BACSU 3 179 evalue:5.0e-51 qcov:95.70 identity:57.50;
90091 90528 CDS
ID metaerg.pl|01944
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0032993; GO:0003677; GO:0001217; GO:0043565; GO:0044212; GO:0000976; GO:0008270; GO:0045892; GO:1900376;
allko_ids K03711;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582872.1 1 145 evalue:1.6e-77 qcov:100.00 identity:98.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01475;
pfam_desc Ferric uptake regulator family;
pfam_id FUR;
pfam_target db:Pfam-A.hmm|PF01475.19 evalue:2.7e-39 score:133.3 best_domain_score:133.0 name:FUR;
sprot_desc Ferric uptake regulation protein;
sprot_id sp|P54574|FUR_BACSU;
sprot_target db:uniprot_sprot|sp|P54574|FUR_BACSU 1 143 evalue:2.7e-68 qcov:98.60 identity:86.00;
90806 91693 CDS
ID metaerg.pl|01945
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0005737; GO:0009037; GO:0007049; GO:0051301; GO:0007059; GO:0006313;
allko_ids K04763;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582870.1 1 295 evalue:1.4e-157 qcov:100.00 identity:95.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00589; PF02899; PF13495;
pfam_desc Phage integrase family; Phage integrase, N-terminal SAM-like domain; Phage integrase, N-terminal SAM-like domain;
pfam_id Phage_integrase; Phage_int_SAM_1; Phage_int_SAM_4;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:2.3e-56 score:189.5 best_domain_score:188.9 name:Phage_integrase; db:Pfam-A.hmm|PF02899.17 evalue:7.7e-21 score:73.4 best_domain_score:73.1 name:Phage_int_SAM_1; db:Pfam-A.hmm|PF13495.6 evalue:3.3e-08 score:33.1 best_domain_score:30.2 name:Phage_int_SAM_4;
sprot_desc Tyrosine recombinase XerD;
sprot_id sp|Q9KCP0|XERD_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KCP0|XERD_BACHD 5 295 evalue:5.6e-97 qcov:98.60 identity:58.90;
tigrfam_acc TIGR02225;
tigrfam_desc tyrosine recombinase XerD;
tigrfam_mainrole DNA metabolism;
tigrfam_name recomb_XerD;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02225 evalue:1.3e-117 score:391.4 best_domain_score:391.2 name:TIGR02225;
91801 92985 CDS
ID metaerg.pl|01946
allec_ids 5.4.2.7;
allgo_ids GO:0003824; GO:0046872; GO:0005737; GO:0000287; GO:0030145; GO:0008973; GO:0006015; GO:0043094; GO:0009264;
allko_ids K01839;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582868.1 1 394 evalue:7.2e-226 qcov:100.00 identity:97.20;
kegg_pathway_id 00230; 00030;
kegg_pathway_name Purine metabolism; Pentose phosphate pathway;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY0-1298; PWY0-1295; PWY0-661; PRPP-PWY; PWY0-1297; PWY0-1296;
metacyc_pathway_name superpathway of pyrimidine deoxyribonucleosides degradation;; pyrimidine ribonucleosides degradation;; ; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine deoxyribonucleosides degradation;; purine ribonucleosides degradation;;
metacyc_pathway_type Pyrimidine-Degradation; Super-Pathways;; Pyrimidine-Ribonucleosides-Degradation;; ; Super-Pathways;; NUCLEO-DEG; Super-Pathways;; Purine-Degradation;;
pfam_acc PF01676;
pfam_desc Metalloenzyme superfamily;
pfam_id Metalloenzyme;
pfam_target db:Pfam-A.hmm|PF01676.18 evalue:1.5e-36 score:125.2 best_domain_score:122.8 name:Metalloenzyme;
sprot_desc Phosphopentomutase;
sprot_id sp|A0RI91|DEOB_BACAH;
sprot_target db:uniprot_sprot|sp|A0RI91|DEOB_BACAH 5 394 evalue:7.3e-177 qcov:99.00 identity:75.70;
tigrfam_acc TIGR01696;
tigrfam_desc phosphopentomutase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name deoB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01696 evalue:7.3e-192 score:636.4 best_domain_score:636.3 name:TIGR01696;
93000 93812 CDS
ID metaerg.pl|01947
allec_ids 2.4.2.1;
allgo_ids GO:0003824; GO:0009116; GO:0004731;
allko_ids K03783;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582866.1 1 270 evalue:1.9e-140 qcov:100.00 identity:94.40;
kegg_pathway_id 00760; 00240; 00230;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Pyrimidine metabolism; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id SALVPURINE2-PWY; URSIN-PWY; SALVADEHYPOX-PWY; P121-PWY; PWY-6579; PWY0-1296; PWY-5695; P1-PWY; PWY-6353;
metacyc_pathway_name xanthine and xanthosine salvage;; ureide biosynthesis;; adenosine nucleotides degradation II;; adenine and adenosine salvage I;; superpathway of guanine and guanosine salvage;; purine ribonucleosides degradation;; inosine 5'-phosphate degradation;; ; purine nucleotides degradation II (aerobic);;
metacyc_pathway_type Purine-Nucleotides-Salvage;; Polyamine-Biosynthesis; Super-Pathways;; Adenosine-Nucleotides-Degradation;; Adenine-Adenosine-Salvage;; Guanine-Guanosine-Salvage; Super-Pathways;; Purine-Degradation;; Purine-Degradation;; ; Purine-Degradation; Super-Pathways;;
pfam_acc PF01048;
pfam_desc Phosphorylase superfamily;
pfam_id PNP_UDP_1;
pfam_target db:Pfam-A.hmm|PF01048.20 evalue:9.7e-55 score:184.6 best_domain_score:184.4 name:PNP_UDP_1;
sprot_desc Purine nucleoside phosphorylase 1;
sprot_id sp|P77834|PUNA_GEOSE;
sprot_target db:uniprot_sprot|sp|P77834|PUNA_GEOSE 2 270 evalue:1.8e-102 qcov:99.60 identity:68.00;
tigrfam_acc TIGR01697; TIGR01700;
tigrfam_desc inosine/guanosine/xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name PNPH-PUNA-XAPA; PNPH;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01697 evalue:6.5e-106 score:352.3 best_domain_score:352.1 name:TIGR01697; db:TIGRFAMs.hmm|TIGR01700 evalue:2.8e-111 score:370.0 best_domain_score:369.9 name:TIGR01700;
93972 95276 CDS
ID metaerg.pl|01948
allec_ids 2.4.2.2;
allgo_ids GO:0016757; GO:0046872; GO:0004645; GO:0016154; GO:0009032; GO:0006206; GO:0006213;
allko_ids K00766; K00758; K00756; K13497;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582864.1 1 434 evalue:2.1e-231 qcov:100.00 identity:96.10;
kegg_pathway_id 00230; 00400; 00240; 02020; 00983;
kegg_pathway_name Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism; Two-component system - General; Drug metabolism - other enzymes;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00591; PF02885; PF07831;
pfam_desc Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; Pyrimidine nucleoside phosphorylase C-terminal domain;
pfam_id Glycos_transf_3; Glycos_trans_3N; PYNP_C;
pfam_target db:Pfam-A.hmm|PF00591.21 evalue:3.1e-40 score:137.6 best_domain_score:137.2 name:Glycos_transf_3; db:Pfam-A.hmm|PF02885.17 evalue:9.1e-25 score:85.5 best_domain_score:83.9 name:Glycos_trans_3N; db:Pfam-A.hmm|PF07831.13 evalue:1.8e-25 score:87.6 best_domain_score:86.5 name:PYNP_C;
sprot_desc Pyrimidine-nucleoside phosphorylase;
sprot_id sp|P77836|PDP_GEOSE;
sprot_target db:uniprot_sprot|sp|P77836|PDP_GEOSE 1 432 evalue:5.7e-146 qcov:99.50 identity:62.30;
tigrfam_acc TIGR02644;
tigrfam_desc pyrimidine-nucleoside phosphorylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name Y_phosphoryl;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02644 evalue:4.5e-177 score:588.1 best_domain_score:588.0 name:TIGR02644;
95597 96934 CDS
ID metaerg.pl|01949
allec_ids 4.1.1.20;
allgo_ids GO:0003824; GO:0008836; GO:0030170; GO:0009089;
allko_ids K12526; K01585; K01583; K01586; K01581;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582862.1 1 445 evalue:8.0e-250 qcov:100.00 identity:96.60;
kegg_pathway_id 00300; 00480; 00251; 00220;
kegg_pathway_name Lysine biosynthesis; Glutathione metabolism; Glutamate metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5097; P4-PWY; PWY-2941; PWY-724; DAPLYSINESYN-PWY; PWY0-781;
metacyc_pathway_name L-lysine biosynthesis VI;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; L-lysine biosynthesis II;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-lysine biosynthesis I;; aspartate superpathway;;
metacyc_pathway_type LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Super-Pathways;;
pfam_acc PF02784; PF00278;
pfam_desc Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Pyridoxal-dependent decarboxylase, C-terminal sheet domain;
pfam_id Orn_Arg_deC_N; Orn_DAP_Arg_deC;
pfam_target db:Pfam-A.hmm|PF02784.16 evalue:2e-64 score:216.5 best_domain_score:216.1 name:Orn_Arg_deC_N; db:Pfam-A.hmm|PF00278.22 evalue:1.4e-18 score:66.2 best_domain_score:65.8 name:Orn_DAP_Arg_deC;
sprot_desc Diaminopimelate decarboxylase;
sprot_id sp|P23630|DCDA_BACSU;
sprot_target db:uniprot_sprot|sp|P23630|DCDA_BACSU 1 426 evalue:8.9e-155 qcov:95.70 identity:61.00;
tigrfam_acc TIGR01048;
tigrfam_desc diaminopimelate decarboxylase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name lysA;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01048 evalue:5.2e-150 score:498.7 best_domain_score:498.5 name:TIGR01048;
97196 97630 CDS
ID metaerg.pl|01950
allec_ids 5.2.1.8;
allgo_ids GO:0000413; GO:0003755; GO:0005737; GO:0006457;
allko_ids K03768;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582860.1 1 144 evalue:1.6e-77 qcov:100.00 identity:96.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00160;
pfam_desc Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;
pfam_id Pro_isomerase;
pfam_target db:Pfam-A.hmm|PF00160.21 evalue:9.6e-41 score:138.9 best_domain_score:138.6 name:Pro_isomerase;
sprot_desc Peptidyl-prolyl cis-trans isomerase B;
sprot_id sp|P35137|PPIB_BACSU;
sprot_target db:uniprot_sprot|sp|P35137|PPIB_BACSU 1 141 evalue:4.7e-57 qcov:97.90 identity:72.30;
98027 99115 CDS
ID metaerg.pl|01951
allec_ids 3.5.4.26; 1.1.1.193; 3.5.4.-;
allgo_ids GO:0002100; GO:0008251; GO:0008703; GO:0008835; GO:0050661; GO:0008270; GO:0009231;
allko_ids K11752;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582858.1 1 362 evalue:2.7e-195 qcov:100.00 identity:96.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-6168; PWY-6167; RIBOSYN2-PWY; PWY-5354; PWY-5209;
metacyc_pathway_name flavin biosynthesis III (fungi);; flavin biosynthesis II (archaea);; flavin biosynthesis I (bacteria and plants);; ; methyl-coenzyme M oxidation to CO2;;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;; ; METHANOGENESIS;;
pfam_acc PF00383; PF18785; PF14437; PF01872;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; Invertebrate-AID/APOBEC-deaminase; MafB19-like deaminase; RibD C-terminal domain;
pfam_id dCMP_cyt_deam_1; Inv-AAD; MafB19-deam; RibD_C;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:1e-20 score:72.7 best_domain_score:72.1 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF18785.1 evalue:2e-06 score:26.9 best_domain_score:22.9 name:Inv-AAD; db:Pfam-A.hmm|PF14437.6 evalue:7.7e-13 score:47.6 best_domain_score:47.0 name:MafB19-deam; db:Pfam-A.hmm|PF01872.17 evalue:2.4e-56 score:189.9 best_domain_score:189.4 name:RibD_C;
sprot_desc Riboflavin biosynthesis protein RibD;
sprot_id sp|P17618|RIBD_BACSU;
sprot_target db:uniprot_sprot|sp|P17618|RIBD_BACSU 1 352 evalue:1.8e-105 qcov:97.20 identity:52.10;
tigrfam_acc TIGR00227; TIGR00326;
tigrfam_desc riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribD_Cterm; eubact_ribD;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00227 evalue:2e-68 score:229.3 best_domain_score:228.5 name:TIGR00227; db:TIGRFAMs.hmm|TIGR00326 evalue:2.8e-119 score:397.5 best_domain_score:397.3 name:TIGR00326;
99115 99768 CDS
ID metaerg.pl|01952
allec_ids 2.5.1.9;
allgo_ids GO:0005829; GO:0004746; GO:0009231;
allko_ids K00793;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582857.1 1 217 evalue:1.2e-113 qcov:100.00 identity:96.80;
kegg_pathway_id 00740;
kegg_pathway_name Riboflavin metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-6168; RIBOSYN2-PWY; PWY-6167;
metacyc_pathway_name flavin biosynthesis III (fungi);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis II (archaea);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00677;
pfam_desc Lumazine binding domain;
pfam_id Lum_binding;
pfam_target db:Pfam-A.hmm|PF00677.17 evalue:3.3e-49 score:164.1 best_domain_score:83.3 name:Lum_binding;
sprot_desc Riboflavin synthase;
sprot_id sp|P16440|RISA_BACSU;
sprot_target db:uniprot_sprot|sp|P16440|RISA_BACSU 1 216 evalue:7.1e-65 qcov:99.50 identity:57.40;
tigrfam_acc TIGR00187;
tigrfam_desc riboflavin synthase, alpha subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribE;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00187 evalue:6e-75 score:250.1 best_domain_score:249.8 name:TIGR00187;
99859 101058 CDS
ID metaerg.pl|01953
allec_ids 4.1.99.12; 3.5.4.25;
allgo_ids GO:0008686; GO:0009231; GO:0005525; GO:0003935; GO:0000287; GO:0030145; GO:0008270;
allko_ids K14652;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582856.1 1 399 evalue:4.1e-229 qcov:100.00 identity:99.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id RIBOSYN2-PWY; PWY-6167; PWY-6168;
metacyc_pathway_name flavin biosynthesis I (bacteria and plants);; flavin biosynthesis II (archaea);; flavin biosynthesis III (fungi);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00926; PF00925;
pfam_desc 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II;
pfam_id DHBP_synthase; GTP_cyclohydro2;
pfam_target db:Pfam-A.hmm|PF00926.19 evalue:6.5e-87 score:289.3 best_domain_score:288.9 name:DHBP_synthase; db:Pfam-A.hmm|PF00925.20 evalue:2.8e-76 score:253.9 best_domain_score:253.0 name:GTP_cyclohydro2;
sprot_desc Riboflavin biosynthesis protein RibBA;
sprot_id sp|C5D3N0|RIBBA_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D3N0|RIBBA_GEOSW 4 398 evalue:4.7e-179 qcov:99.00 identity:75.20;
tigrfam_acc TIGR00505; TIGR00506;
tigrfam_desc GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone-4-phosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribA; ribB;
tigrfam_sub1role Riboflavin, FMN, and FAD; Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00505 evalue:9.3e-79 score:262.5 best_domain_score:261.9 name:TIGR00505; db:TIGRFAMs.hmm|TIGR00506 evalue:7e-80 score:266.5 best_domain_score:266.1 name:TIGR00506;
101116 101580 CDS
ID metaerg.pl|01954
allec_ids 2.5.1.78;
allgo_ids GO:0009231; GO:0009349; GO:0000906;
allko_ids K00794;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582854.1 1 154 evalue:1.1e-81 qcov:100.00 identity:100.00;
kegg_pathway_id 00740;
kegg_pathway_name Riboflavin metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-6168; PWY-6167; RIBOSYN2-PWY;
metacyc_pathway_name flavin biosynthesis III (fungi);; flavin biosynthesis II (archaea);; flavin biosynthesis I (bacteria and plants);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00885;
pfam_desc 6,7-dimethyl-8-ribityllumazine synthase;
pfam_id DMRL_synthase;
pfam_target db:Pfam-A.hmm|PF00885.19 evalue:1.1e-58 score:196.3 best_domain_score:196.1 name:DMRL_synthase;
sprot_desc 6,7-dimethyl-8-ribityllumazine synthase;
sprot_id sp|Q9KCL4|RISB_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KCL4|RISB_BACHD 1 151 evalue:8.1e-63 qcov:98.10 identity:72.80;
tigrfam_acc TIGR00114;
tigrfam_desc 6,7-dimethyl-8-ribityllumazine synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name lumazine-synth;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00114 evalue:4.2e-59 score:197.7 best_domain_score:197.5 name:TIGR00114;
102426 101887 CDS
ID metaerg.pl|01955
allko_ids K09763;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582852.1 1 179 evalue:1.2e-87 qcov:100.00 identity:91.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF03745;
pfam_desc Domain of unknown function (DUF309);
pfam_id DUF309;
pfam_target db:Pfam-A.hmm|PF03745.14 evalue:5e-17 score:60.6 best_domain_score:60.6 name:DUF309;
sprot_desc hypothetical protein;
sprot_id sp|P17617|YPUF_BACSU;
sprot_target db:uniprot_sprot|sp|P17617|YPUF_BACSU 9 177 evalue:8.3e-27 qcov:94.40 identity:37.80;
102554 103315 CDS
ID metaerg.pl|01956
allgo_ids GO:0005737; GO:0007049; GO:0051301; GO:0007059; GO:0006260;
allko_ids K05896;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582850.1 1 253 evalue:3.8e-127 qcov:100.00 identity:95.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF02616;
pfam_desc Segregation and condensation protein ScpA;
pfam_id SMC_ScpA;
pfam_target db:Pfam-A.hmm|PF02616.14 evalue:1.5e-44 score:151.9 best_domain_score:151.7 name:SMC_ScpA;
sprot_desc Segregation and condensation protein A;
sprot_id sp|A8FEQ8|SCPA_BACP2;
sprot_target db:uniprot_sprot|sp|A8FEQ8|SCPA_BACP2 3 245 evalue:2.1e-55 qcov:96.00 identity:50.60;
103312 103896 CDS
ID metaerg.pl|01957
allgo_ids GO:0051304; GO:0005737; GO:0051301; GO:0006260;
allko_ids K06024;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582847.1 1 194 evalue:8.2e-90 qcov:100.00 identity:91.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF04079;
pfam_desc Segregation and condensation complex subunit ScpB;
pfam_id SMC_ScpB;
pfam_target db:Pfam-A.hmm|PF04079.16 evalue:1e-53 score:180.5 best_domain_score:180.2 name:SMC_ScpB;
sprot_desc Segregation and condensation protein B;
sprot_id sp|A4IQG3|SCPB_GEOTN;
sprot_target db:uniprot_sprot|sp|A4IQG3|SCPB_GEOTN 7 194 evalue:2.0e-50 qcov:96.90 identity:54.20;
tigrfam_acc TIGR00281;
tigrfam_desc segregation and condensation protein B;
tigrfam_mainrole DNA metabolism;
tigrfam_name TIGR00281;
tigrfam_sub1role Chromosome-associated proteins;
tigrfam_target db:TIGRFAMs.hmm|TIGR00281 evalue:5.8e-51 score:171.9 best_domain_score:171.6 name:TIGR00281;
105104 104304 CDS
ID metaerg.pl|01958
allec_ids 1.1.1.36;
allgo_ids GO:0003824; GO:0050662; GO:0005737; GO:0018454; GO:0042619;
allko_ids K12420;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582844.1 1 266 evalue:3.3e-134 qcov:100.00 identity:94.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY1-3; PWY-5676; PWY-5080;
metacyc_pathway_name polyhydroxybutanoate biosynthesis;; acetyl-CoA fermentation to butanoate II;; very long chain fatty acid biosynthesis I;;
metacyc_pathway_type Storage-Compounds-Biosynthesis;; Acetyl-CoA-Butyrate; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00106; PF13561; PF01370; PF08659; PF13460; PF05368;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain; NAD(P)H-binding ; NmrA-like family;
pfam_id adh_short; adh_short_C2; Epimerase; KR; NAD_binding_10; NmrA;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2.2e-58 score:196.2 best_domain_score:195.8 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:3.1e-52 score:176.7 best_domain_score:176.2 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:2.3e-06 score:26.5 best_domain_score:25.7 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:1.4e-19 score:70.0 best_domain_score:69.3 name:KR; db:Pfam-A.hmm|PF13460.6 evalue:5.5e-07 score:28.9 best_domain_score:27.8 name:NAD_binding_10; db:Pfam-A.hmm|PF05368.13 evalue:1.8e-06 score:26.9 best_domain_score:26.4 name:NmrA;
sprot_desc Acetoacetyl-CoA reductase;
sprot_id sp|P50203|PHAB_ACISR;
sprot_target db:uniprot_sprot|sp|P50203|PHAB_ACISR 15 265 evalue:7.5e-32 qcov:94.40 identity:34.40;
105574 106989 CDS
ID metaerg.pl|01959
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582842.1 1 471 evalue:1.5e-241 qcov:100.00 identity:89.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF13091;
pfam_desc PLD-like domain;
pfam_id PLDc_2;
pfam_target db:Pfam-A.hmm|PF13091.6 evalue:2.6e-25 score:88.1 best_domain_score:69.6 name:PLDc_2;
sp YES;
tm_num 1;
105574 105651 signal_peptide
ID metaerg.pl|01960
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
105574 106989 transmembrane_helix
ID metaerg.pl|01961
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i105592-105651o;
108412 107591 CDS
ID metaerg.pl|01962
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582840.1 1 273 evalue:4.0e-135 qcov:100.00 identity:85.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF05448; PF12146;
pfam_desc Acetyl xylan esterase (AXE1); Serine aminopeptidase, S33;
pfam_id AXE1; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF05448.12 evalue:1e-09 score:36.8 best_domain_score:31.9 name:AXE1; db:Pfam-A.hmm|PF12146.8 evalue:7.4e-09 score:34.5 best_domain_score:22.3 name:Hydrolase_4;
sp YES;
107591 107662 signal_peptide
ID metaerg.pl|01963
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
108583 109302 CDS
ID metaerg.pl|01964
allec_ids 5.4.99.22; 5.4.99.-;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0005829; GO:0120159; GO:0000455;
allko_ids K06178;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582838.1 1 239 evalue:7.9e-127 qcov:100.00 identity:97.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5992; PWY-5203; PWY-6109; PWY-6008; PWY-5672; PWY-6115; PWY-5377; RIBOKIN-PWY; PWY-112; PWY-6005;
metacyc_pathway_name thalianol and derivatives biosynthesis;; soybean saponin I biosynthesis;; mangrove triterpenoid biosynthesis;; baruol biosynthesis;; ginsenosides biosynthesis;; ; α-amyrin biosynthesis;; ribose phosphorylation;; lupeol biosynthesis;; marneral biosynthesis;;
metacyc_pathway_type TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; ; TRITERPENOID-SYN;; Sugars-And-Polysaccharides-Degradation;; TRITERPENOID-SYN;; TRITERPENOID-SYN;;
pfam_acc PF00849; PF01479;
pfam_desc RNA pseudouridylate synthase; S4 domain;
pfam_id PseudoU_synth_2; S4;
pfam_target db:Pfam-A.hmm|PF00849.22 evalue:1.1e-24 score:86.6 best_domain_score:86.0 name:PseudoU_synth_2; db:Pfam-A.hmm|PF01479.25 evalue:1.6e-12 score:46.2 best_domain_score:44.5 name:S4;
sprot_desc Ribosomal large subunit pseudouridine synthase B;
sprot_id sp|P35159|RLUB_BACSU;
sprot_target db:uniprot_sprot|sp|P35159|RLUB_BACSU 1 237 evalue:5.2e-85 qcov:99.20 identity:65.10;
tigrfam_acc TIGR00093;
tigrfam_desc pseudouridine synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00093;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00093 evalue:1.2e-51 score:173.8 best_domain_score:173.5 name:TIGR00093;
109403 109930 CDS
ID metaerg.pl|01965
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0016021; GO:0005886; GO:0015036; GO:0045454; GO:0017004;
allko_ids K03564; K11065; K12267; K03386;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582836.1 1 175 evalue:2.9e-94 qcov:100.00 identity:97.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00578; PF00255; PF08534; PF00085; PF13098; PF13905;
pfam_desc AhpC/TSA family; Glutathione peroxidase; Redoxin; Thioredoxin; Thioredoxin-like domain; Thioredoxin-like;
pfam_id AhpC-TSA; GSHPx; Redoxin; Thioredoxin; Thioredoxin_2; Thioredoxin_8;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:7.8e-27 score:92.9 best_domain_score:92.6 name:AhpC-TSA; db:Pfam-A.hmm|PF00255.19 evalue:6.7e-05 score:21.7 best_domain_score:20.7 name:GSHPx; db:Pfam-A.hmm|PF08534.10 evalue:2.6e-22 score:78.3 best_domain_score:76.7 name:Redoxin; db:Pfam-A.hmm|PF00085.20 evalue:1.9e-08 score:33.4 best_domain_score:23.6 name:Thioredoxin; db:Pfam-A.hmm|PF13098.6 evalue:2.6e-06 score:27.1 best_domain_score:26.5 name:Thioredoxin_2; db:Pfam-A.hmm|PF13905.6 evalue:1.7e-09 score:37.1 best_domain_score:36.6 name:Thioredoxin_8;
sprot_desc Thiol-disulfide oxidoreductase ResA;
sprot_id sp|Q9KCJ4|RESA_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KCJ4|RESA_BACHD 2 174 evalue:1.7e-40 qcov:98.90 identity:44.50;
tm_num 1;
109403 109930 transmembrane_helix
ID metaerg.pl|01966
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i109421-109477o;
109943 111613 CDS
ID metaerg.pl|01967
allgo_ids GO:0016021; GO:0005886; GO:0017004;
allko_ids K07399;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582834.1 1 556 evalue:0.0e+00 qcov:100.00 identity:96.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF05140;
pfam_desc ResB-like family;
pfam_id ResB;
pfam_target db:Pfam-A.hmm|PF05140.14 evalue:2e-90 score:303.1 best_domain_score:298.0 name:ResB;
sprot_desc Cytochrome c biogenesis protein ResB;
sprot_id sp|P35161|RESB_BACSU;
sprot_target db:uniprot_sprot|sp|P35161|RESB_BACSU 1 547 evalue:1.4e-160 qcov:98.40 identity:51.40;
tm_num 4;
109943 111613 transmembrane_helix
ID metaerg.pl|01968
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i110108-110176o110303-110371i110567-110635o111344-111412i;
111615 112799 CDS
ID metaerg.pl|01969
allgo_ids GO:0017004; GO:0020037; GO:0016021; GO:0005886; GO:0015886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582831.1 1 394 evalue:5.2e-216 qcov:100.00 identity:98.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01578;
pfam_desc Cytochrome C assembly protein;
pfam_id Cytochrom_C_asm;
pfam_target db:Pfam-A.hmm|PF01578.20 evalue:1.4e-34 score:119.0 best_domain_score:95.4 name:Cytochrom_C_asm;
sprot_desc Cytochrome c biogenesis protein ResC;
sprot_id sp|P35162|RESC_BACSU;
sprot_target db:uniprot_sprot|sp|P35162|RESC_BACSU 1 394 evalue:1.3e-117 qcov:100.00 identity:54.80;
tigrfam_acc TIGR03144;
tigrfam_desc cytochrome c-type biogenesis protein CcsB;
tigrfam_mainrole Protein fate;
tigrfam_name cytochr_II_ccsB;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR03144 evalue:4.4e-74 score:248.5 best_domain_score:245.9 name:TIGR03144;
tm_num 10;
111615 112799 transmembrane_helix
ID metaerg.pl|01970
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o111624-111692i111747-111815o111843-111902i111921-111980o112023-112091i112152-112220o112386-112445i112518-112586o112629-112682i112716-112784o;
112877 113599 CDS
ID metaerg.pl|01971
allgo_ids GO:0000160; GO:0005829; GO:0032993; GO:0001216; GO:0003700; GO:0000156; GO:0000976;
allko_ids K01768; K07640; K07710; K07716; K02489; K10916; K08479; K03388; K02668; K07678; K10715; K02030; K11527; K07636; K07653; K07638; K02480; K02482; K07644; K07709; K07676; K10681; K06379; K07650; K01769; K07717; K07675; K07647; K11357; K10125; K04757; K07769; K02486; K13761; K11383; K12767; K07652; K07673; K01120; K08475; K07639; K07646; K07641; K07637; K03407; K07682; K07654; K07718; K07651; K07648; K02478; K07679; K08884; K00873; K07711; K07768; K02575; K11354; K07778; K11640; K11356; K02484; K00760; K07642; K11711; K13490; K02491; K11231; K08282; K01937; K07704; K10909; K07677; K07645; K07708; K07775;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582829.1 1 240 evalue:7.7e-130 qcov:100.00 identity:98.80;
kegg_pathway_id 00983; 00710; 00010; 00240; 00230; 05111; 03090; 00620; 04011; 02020; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:1.5e-34 score:117.7 best_domain_score:117.2 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:7.7e-28 score:95.6 best_domain_score:94.6 name:Trans_reg_C;
sprot_desc Transcriptional regulatory protein ResD;
sprot_id sp|P35163|RESD_BACSU;
sprot_target db:uniprot_sprot|sp|P35163|RESD_BACSU 6 236 evalue:2.8e-94 qcov:96.20 identity:72.30;
113596 115410 CDS
ID metaerg.pl|01972
allec_ids 2.7.13.3;
allgo_ids GO:0007165; GO:0016021; GO:0005886; GO:0005524; GO:0000156; GO:0000155; GO:0030295; GO:0007234; GO:0006355;
allko_ids K02480; K14489; K02482; K08801; K07636; K07638; K07653; K07701; K13587; K02030; K11527; K07655; K07678; K10715; K03388; K02668; K10916; K07674; K08479; K07716; K11614; K07697; K02489; K01768; K07656; K07640; K07710; K14509; K11520; K07769; K11383; K02486; K12767; K11357; K02476; K11629; K10125; K04757; K10942; K13040; K07680; K07647; K07717; K07675; K11637; K01769; K10681; K07676; K06379; K07650; K13532; K07709; K07644; K07768; K11633; K11354; K07778; K11328; K13533; K08884; K00873; K07711; K07648; K02478; K07679; K07698; K07718; K07651; K07777; K00936; K07682; K07649; K07654; K07637; K03407; K07673; K07639; K08475; K07646; K13598; K07641; K07652; K07677; K07708; K07645; K08282; K10909; K07704; K07643; K11231; K02491; K11711; K07642; K02484; K11640; K11356;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582827.1 2 604 evalue:0.0e+00 qcov:99.80 identity:95.90;
kegg_pathway_id 00790; 00620; 03090; 02020; 04011; 05111; 00230; 00010; 00710;
kegg_pathway_name Folate biosynthesis; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Vibrio cholerae pathogenic cycle; Purine metabolism; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00672; PF02518; PF13589; PF00512; PF18698;
pfam_desc HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Histidine kinase sensor domain;
pfam_id HAMP; HATPase_c; HATPase_c_3; HisKA; HisK_sensor;
pfam_target db:Pfam-A.hmm|PF00672.25 evalue:9.6e-18 score:63.6 best_domain_score:62.4 name:HAMP; db:Pfam-A.hmm|PF02518.26 evalue:1.2e-28 score:99.1 best_domain_score:97.9 name:HATPase_c; db:Pfam-A.hmm|PF13589.6 evalue:7.6e-07 score:28.3 best_domain_score:25.9 name:HATPase_c_3; db:Pfam-A.hmm|PF00512.25 evalue:9.9e-19 score:66.4 best_domain_score:66.4 name:HisKA; db:Pfam-A.hmm|PF18698.1 evalue:2.9e-27 score:94.8 best_domain_score:89.6 name:HisK_sensor;
sprot_desc Sensor histidine kinase ResE;
sprot_id sp|P35164|RESE_BACSU;
sprot_target db:uniprot_sprot|sp|P35164|RESE_BACSU 1 585 evalue:1.1e-174 qcov:96.90 identity:54.40;
tm_num 2;
113596 115410 transmembrane_helix
ID metaerg.pl|01973
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o113626-113685i114118-114186o;
115430 115987 CDS
ID metaerg.pl|01974
allec_ids 2.5.1.17;
allgo_ids GO:0005737; GO:0005524; GO:0008817; GO:0009236; GO:0006779;
allko_ids K00798;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582825.1 1 185 evalue:4.1e-99 qcov:100.00 identity:97.80;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-6268; P381-PWY;
metacyc_pathway_name adenosylcobalamin salvage from cobalamin;; adenosylcobalamin biosynthesis II (aerobic);;
metacyc_pathway_type Cobamide-Salvage;; De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;;
pfam_acc PF01923;
pfam_desc Cobalamin adenosyltransferase;
pfam_id Cob_adeno_trans;
pfam_target db:Pfam-A.hmm|PF01923.18 evalue:4.1e-54 score:182.4 best_domain_score:182.2 name:Cob_adeno_trans;
sprot_desc Corrinoid adenosyltransferase;
sprot_id sp|O34899|PDUO_BACSU;
sprot_target db:uniprot_sprot|sp|O34899|PDUO_BACSU 1 185 evalue:6.7e-48 qcov:100.00 identity:53.20;
tigrfam_acc TIGR00636;
tigrfam_desc ATP:cob(I)alamin adenosyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name PduO_Nterm;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00636 evalue:3e-56 score:188.9 best_domain_score:188.8 name:TIGR00636;
116988 116188 CDS
ID metaerg.pl|01975
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582822.1 1 266 evalue:1.8e-116 qcov:100.00 identity:91.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF09312; PF13623; PF13624;
pfam_desc SurA N-terminal domain; SurA N-terminal domain; SurA N-terminal domain;
pfam_id SurA_N; SurA_N_2; SurA_N_3;
pfam_target db:Pfam-A.hmm|PF09312.11 evalue:4e-11 score:42.3 best_domain_score:42.3 name:SurA_N; db:Pfam-A.hmm|PF13623.6 evalue:1.3e-12 score:47.0 best_domain_score:47.0 name:SurA_N_2; db:Pfam-A.hmm|PF13624.6 evalue:2.4e-19 score:68.9 best_domain_score:68.9 name:SurA_N_3;
sp YES;
116188 116253 lipoprotein_signal_peptide
ID metaerg.pl|01976
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
119460 117847 CDS
ID metaerg.pl|01977
allec_ids 1.1.1.95;
allgo_ids GO:0016616; GO:0051287; GO:0055114; GO:0004617; GO:0006520; GO:0006564;
allko_ids K00058; K00018; K00122; K04496; K01752; K03778;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582820.1 1 537 evalue:1.6e-297 qcov:100.00 identity:98.90;
kegg_pathway_id 00630; 00272; 00680; 04310; 00260; 00620;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Cysteine metabolism; Methane metabolism; Wnt signaling pathway; Glycine, serine and threonine metabolism; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id SER-GLYSYN-PWY; SERSYN-PWY; SULFATE-CYS-PWY;
metacyc_pathway_name superpathway of L-serine and glycine biosynthesis I;; L-serine biosynthesis I;; superpathway of sulfate assimilation and cysteine biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; SERINE-BIOSYNTHESIS;; Sulfur-Metabolism; Super-Pathways;;
pfam_acc PF00389; PF02826; PF01842; PF07991;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; Acetohydroxy acid isomeroreductase, NADPH-binding domain;
pfam_id 2-Hacid_dh; 2-Hacid_dh_C; ACT; IlvN;
pfam_target db:Pfam-A.hmm|PF00389.30 evalue:2.3e-34 score:117.2 best_domain_score:116.0 name:2-Hacid_dh; db:Pfam-A.hmm|PF02826.19 evalue:2.9e-65 score:218.2 best_domain_score:217.4 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF01842.25 evalue:2.9e-09 score:35.8 best_domain_score:34.3 name:ACT; db:Pfam-A.hmm|PF07991.12 evalue:9.9e-05 score:21.2 best_domain_score:19.6 name:IlvN;
sprot_desc D-3-phosphoglycerate dehydrogenase;
sprot_id sp|P35136|SERA_BACSU;
sprot_target db:uniprot_sprot|sp|P35136|SERA_BACSU 15 537 evalue:1.2e-161 qcov:97.40 identity:54.30;
tigrfam_acc TIGR01327;
tigrfam_desc phosphoglycerate dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name PGDH;
tigrfam_sub1role Serine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01327 evalue:5.9e-206 score:684.4 best_domain_score:684.3 name:TIGR01327;
120042 119794 CDS
ID metaerg.pl|01978
allgo_ids GO:0051539; GO:0009055; GO:0005506;
allko_ids K11260; K00124; K00533; K00205; K00171; K05337;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582818.1 1 82 evalue:6.6e-41 qcov:100.00 identity:100.00;
kegg_pathway_id 00790; 00650; 00680; 00640; 00630; 00620; 00633; 00020; 00010; 00720;
kegg_pathway_name Folate biosynthesis; Butanoate metabolism; Methane metabolism; Propanoate metabolism; Glyoxylate and dicarboxylate metabolism; Pyruvate metabolism; Trinitrotoluene degradation; Citrate cycle (TCA cycle); Glycolysis / Gluconeogenesis; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF13370; PF13459;
pfam_desc 4Fe-4S single cluster domain of Ferredoxin I; 4Fe-4S single cluster domain;
pfam_id Fer4_13; Fer4_15;
pfam_target db:Pfam-A.hmm|PF13370.6 evalue:1.6e-22 score:79.0 best_domain_score:78.8 name:Fer4_13; db:Pfam-A.hmm|PF13459.6 evalue:5.1e-14 score:52.0 best_domain_score:51.7 name:Fer4_15;
sprot_desc Ferredoxin;
sprot_id sp|P50727|FER_BACSU;
sprot_target db:uniprot_sprot|sp|P50727|FER_BACSU 1 82 evalue:9.3e-34 qcov:100.00 identity:80.50;
120388 121440 CDS
ID metaerg.pl|01979
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582816.1 1 350 evalue:1.8e-167 qcov:100.00 identity:86.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF14493;
pfam_desc Helix-turn-helix domain;
pfam_id HTH_40;
pfam_target db:Pfam-A.hmm|PF14493.6 evalue:2.6e-22 score:78.3 best_domain_score:74.6 name:HTH_40;
sprot_desc hypothetical protein;
sprot_id sp|P50728|YPBB_BACSU;
sprot_target db:uniprot_sprot|sp|P50728|YPBB_BACSU 2 336 evalue:7.0e-38 qcov:95.70 identity:32.70;
121433 122956 CDS
ID metaerg.pl|01980
allec_ids 3.6.4.12;
allgo_ids GO:0003676; GO:0005524; GO:0043590; GO:0005694; GO:0005737; GO:0030894; GO:0043140; GO:0003677; GO:0009378; GO:0032508; GO:0006310; GO:0006281;
allko_ids K12614; K05592; K03725; K05591; K13131; K01509; K12812; K10896; K13182; K03654;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582814.1 1 502 evalue:9.1e-266 qcov:99.00 identity:90.60;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00270; PF00271; PF04851;
pfam_desc DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit;
pfam_id DEAD; Helicase_C; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:2.7e-22 score:78.6 best_domain_score:77.6 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:3e-22 score:78.3 best_domain_score:69.8 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:6.3e-09 score:35.3 best_domain_score:34.1 name:ResIII;
sprot_desc Probable ATP-dependent DNA helicase RecS;
sprot_id sp|P50729|RECS_BACSU;
sprot_target db:uniprot_sprot|sp|P50729|RECS_BACSU 4 486 evalue:2.5e-97 qcov:95.30 identity:41.20;
tigrfam_acc TIGR00614;
tigrfam_desc ATP-dependent DNA helicase, RecQ family;
tigrfam_mainrole DNA metabolism;
tigrfam_name recQ_fam;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00614 evalue:1.7e-112 score:375.7 best_domain_score:359.8 name:TIGR00614;
122916 123485 CDS
ID metaerg.pl|01981
allgo_ids GO:0016020; GO:0016021; GO:0005886;
allko_ids K07052;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582811.1 1 189 evalue:8.0e-90 qcov:100.00 identity:92.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF02517;
pfam_desc CPBP intramembrane metalloprotease;
pfam_id CPBP;
pfam_target db:Pfam-A.hmm|PF02517.16 evalue:3.3e-12 score:45.8 best_domain_score:45.8 name:CPBP;
sprot_desc hypothetical protein;
sprot_id sp|P50730|YPBD_BACSU;
sprot_target db:uniprot_sprot|sp|P50730|YPBD_BACSU 22 188 evalue:1.1e-26 qcov:88.40 identity:42.90;
tm_num 5;
122916 123485 transmembrane_helix
ID metaerg.pl|01982
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o122994-123062i123081-123149o123255-123323i123342-123401o123411-123467i;
123553 123777 CDS
ID metaerg.pl|01983
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582809.1 2 74 evalue:2.8e-30 qcov:98.60 identity:95.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
tm_num 1;
123553 123777 transmembrane_helix
ID metaerg.pl|01984
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i123703-123771o;
123914 124276 CDS
ID metaerg.pl|01985
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
125721 124282 CDS
ID metaerg.pl|01986
allec_ids 4.1.99.3;
allgo_ids GO:0003904; GO:0003677; GO:0006281; GO:0018298;
allko_ids K01669;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582807.1 1 478 evalue:3.2e-252 qcov:99.80 identity:86.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00875; PF03441;
pfam_desc DNA photolyase; FAD binding domain of DNA photolyase;
pfam_id DNA_photolyase; FAD_binding_7;
pfam_target db:Pfam-A.hmm|PF00875.18 evalue:1.8e-33 score:115.1 best_domain_score:113.5 name:DNA_photolyase; db:Pfam-A.hmm|PF03441.14 evalue:9.2e-89 score:295.5 best_domain_score:295.1 name:FAD_binding_7;
sprot_desc Deoxyribodipyrimidine photo-lyase;
sprot_id sp|Q04449|PHR_BACPE;
sprot_target db:uniprot_sprot|sp|Q04449|PHR_BACPE 8 478 evalue:5.2e-116 qcov:98.30 identity:43.20;
126195 127868 CDS
ID metaerg.pl|01987
allec_ids 6.3.4.3;
allgo_ids GO:0004329; GO:0005524; GO:0035999;
allko_ids K01938; K13402; K01491; K00288; K13403;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582805.1 1 557 evalue:7.4e-311 qcov:100.00 identity:96.40;
kegg_pathway_id 00630; 00670;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; One carbon pool by folate;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-6142; 1CMET2-PWY; PWY-2161; PWY-1722; PWY-6146; PWY-2201; CODH-PWY; PWY-1882; PWY-5497; P164-PWY; PWY-3841;
metacyc_pathway_name gluconeogenesis II (Methanobacterium thermoautotrophicum);; N10-formyl-tetrahydrofolate biosynthesis;; folate polyglutamylation;; formate assimilation into 5,10-methylenetetrahydrofolate;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; folate transformations I;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; superpathway of C1 compounds oxidation to CO2;; purine nucleobases degradation II (anaerobic);; purine nucleobases degradation I (anaerobic);; folate transformations II;;
metacyc_pathway_type Gluconeogenesis; Super-Pathways;; Folate-Biosynthesis;; Folate-Biosynthesis;; C1-COMPOUNDS;; Biosynthesis; Super-Pathways;; Folate-Transformations;; Autotrophic-CO2-Fixation;; C1-COMPOUNDS; Super-Pathways;; Fermentation; Purine-Degradation;; Fermentation; Purine-Degradation;; Folate-Transformations;;
pfam_acc PF01268;
pfam_desc Formate--tetrahydrofolate ligase;
pfam_id FTHFS;
pfam_target db:Pfam-A.hmm|PF01268.19 evalue:1.9e-269 score:893.8 best_domain_score:893.6 name:FTHFS;
sprot_desc Formate--tetrahydrofolate ligase;
sprot_id sp|B7HP29|FTHS_BACC7;
sprot_target db:uniprot_sprot|sp|B7HP29|FTHS_BACC7 3 557 evalue:4.6e-233 qcov:99.60 identity:70.50;
127893 128828 CDS
ID metaerg.pl|01988
allgo_ids GO:0016787; GO:0005524; GO:0008758; GO:0009245;
allko_ids K01120;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582803.1 63 311 evalue:6.0e-119 qcov:80.10 identity:87.60;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:4.2e-10 score:39.7 best_domain_score:39.0 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:7.8e-10 score:38.4 best_domain_score:37.4 name:Metallophos_2;
sprot_desc hypothetical protein;
sprot_id sp|P50733|YPBG_BACSU;
sprot_target db:uniprot_sprot|sp|P50733|YPBG_BACSU 73 304 evalue:2.7e-41 qcov:74.60 identity:39.90;
tm_num 1;
127893 128828 transmembrane_helix
ID metaerg.pl|01989
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i128079-128147o;
128904 129803 CDS
ID metaerg.pl|01990
allgo_ids GO:0031419; GO:0046872;
allko_ids K01844; K00548;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582801.1 1 299 evalue:5.5e-162 qcov:100.00 identity:94.60;
kegg_pathway_id 00670; 00271; 00310;
kegg_pathway_name One carbon pool by folate; Methionine metabolism; Lysine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF02310; PF02607; PF00376; PF13411;
pfam_desc B12 binding domain; B12 binding domain; MerR family regulatory protein; MerR HTH family regulatory protein;
pfam_id B12-binding; B12-binding_2; MerR; MerR_1;
pfam_target db:Pfam-A.hmm|PF02310.19 evalue:8.8e-10 score:37.9 best_domain_score:36.9 name:B12-binding; db:Pfam-A.hmm|PF02607.17 evalue:1.9e-07 score:30.7 best_domain_score:29.9 name:B12-binding_2; db:Pfam-A.hmm|PF00376.23 evalue:6.7e-11 score:41.0 best_domain_score:39.7 name:MerR; db:Pfam-A.hmm|PF13411.6 evalue:3.3e-16 score:58.3 best_domain_score:57.6 name:MerR_1;
129963 131255 CDS
ID metaerg.pl|01991
allec_ids 1.4.1.2;
allgo_ids GO:0006520; GO:0016491; GO:0055114; GO:0004352;
allko_ids K00263; K00261; K00260; K00262;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582798.1 1 430 evalue:1.2e-237 qcov:100.00 identity:96.50;
kegg_pathway_id 00910; 00280; 00290; 00330; 00251; 00471;
kegg_pathway_name Nitrogen metabolism; Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Arginine and proline metabolism; Glutamate metabolism; D-Glutamine and D-glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id GLUTAMATE-DEG1-PWY; PROPFERM-PWY;
metacyc_pathway_name L-glutamate degradation I;; L-alanine fermentation to propanoate and acetate;;
metacyc_pathway_type GLUTAMATE-DEG;; Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;;
pfam_acc PF00208; PF02812;
pfam_desc Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF00208.21 evalue:2.3e-75 score:252.7 best_domain_score:252.1 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:7.9e-53 score:177.0 best_domain_score:176.2 name:ELFV_dehydrog_N;
sprot_desc Cryptic catabolic NAD-specific glutamate dehydrogenase GudB;
sprot_id sp|P50735|GUDB_BACSU;
sprot_target db:uniprot_sprot|sp|P50735|GUDB_BACSU 18 430 evalue:3.9e-200 qcov:96.00 identity:80.00;
131462 132460 CDS
ID metaerg.pl|01992
allec_ids 1.8.-.-;
allgo_ids GO:0016491; GO:0055114;
allko_ids K03388; K00384; K00266;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583251.1 1 332 evalue:7.0e-174 qcov:100.00 identity:90.70;
kegg_pathway_id 00790; 00240; 00910; 00251;
kegg_pathway_name Folate biosynthesis; Pyrimidine metabolism; Nitrogen metabolism; Glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01266; PF00890; PF01494; PF00743; PF01134; PF03486; PF13434; PF13241; PF13450; PF00070; PF07992; PF13738;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; FAD binding domain; Flavin-binding monooxygenase-like; Glucose inhibited division protein A; HI0933-like protein; L-lysine 6-monooxygenase (NADPH-requiring); Putative NAD(P)-binding; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id DAO; FAD_binding_2; FAD_binding_3; FMO-like; GIDA; HI0933_like; K_oxygenase; NAD_binding_7; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:6.6e-08 score:31.7 best_domain_score:15.1 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:3.8e-06 score:25.5 best_domain_score:24.7 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:7.2e-08 score:31.3 best_domain_score:25.8 name:FAD_binding_3; db:Pfam-A.hmm|PF00743.19 evalue:3.1e-06 score:25.1 best_domain_score:13.9 name:FMO-like; db:Pfam-A.hmm|PF01134.22 evalue:9.4e-07 score:27.5 best_domain_score:14.8 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:7.8e-10 score:37.2 best_domain_score:22.1 name:HI0933_like; db:Pfam-A.hmm|PF13434.6 evalue:1.7e-09 score:36.5 best_domain_score:24.7 name:K_oxygenase; db:Pfam-A.hmm|PF13241.6 evalue:6.4e-05 score:22.6 best_domain_score:12.8 name:NAD_binding_7; db:Pfam-A.hmm|PF13450.6 evalue:1.4e-06 score:27.7 best_domain_score:20.8 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:7.1e-11 score:41.8 best_domain_score:26.3 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.6e-32 score:112.2 best_domain_score:111.9 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:5.7e-97 score:323.9 best_domain_score:323.7 name:Pyr_redox_3;
sprot_desc hypothetical protein;
sprot_id sp|P50736|YPDA_BACSU;
sprot_target db:uniprot_sprot|sp|P50736|YPDA_BACSU 1 325 evalue:1.4e-104 qcov:97.90 identity:57.40;
tigrfam_acc TIGR04018;
tigrfam_desc putative bacillithiol system oxidoreductase, YpdA family;
tigrfam_mainrole Unknown function;
tigrfam_name Bthiol_YpdA;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR04018 evalue:1.2e-138 score:460.4 best_domain_score:460.2 name:TIGR04018;
132548 133507 CDS
ID metaerg.pl|01993
allec_ids 3.5.1.1;
allgo_ids GO:0005737; GO:0004067; GO:0006528;
allko_ids K01424; K13278;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582796.1 1 319 evalue:8.8e-166 qcov:100.00 identity:93.10;
kegg_pathway_id 00252; 00910; 00460;
kegg_pathway_name Alanine and aspartate metabolism; Nitrogen metabolism; Cyanoamino acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id ASPARAGINE-DEG1-PWY; ASPASN-PWY;
metacyc_pathway_name L-asparagine degradation I;; superpathway of L-aspartate and L-asparagine biosynthesis;;
metacyc_pathway_type ASPARAGINE-DEG;; Amino-Acid-Biosynthesis; Metabolic-Clusters; Super-Pathways;;
pfam_acc PF00710; PF17763;
pfam_desc Asparaginase, N-terminal; Glutaminase/Asparaginase C-terminal domain;
pfam_id Asparaginase; Asparaginase_C;
pfam_target db:Pfam-A.hmm|PF00710.20 evalue:8.3e-50 score:168.2 best_domain_score:167.4 name:Asparaginase; db:Pfam-A.hmm|PF17763.1 evalue:3.2e-19 score:68.5 best_domain_score:67.1 name:Asparaginase_C;
sprot_desc L-asparaginase;
sprot_id sp|P30363|ASPG_BACLI;
sprot_target db:uniprot_sprot|sp|P30363|ASPG_BACLI 2 309 evalue:1.2e-92 qcov:96.60 identity:52.90;
133553 134227 CDS
ID metaerg.pl|01994
allec_ids 3.4.-.-;
allgo_ids GO:0008233; GO:0016021; GO:0005886; GO:0007165;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582794.1 1 224 evalue:9.1e-109 qcov:100.00 identity:93.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF13367;
pfam_desc PrsW family intramembrane metalloprotease;
pfam_id PrsW-protease;
pfam_target db:Pfam-A.hmm|PF13367.6 evalue:1.8e-33 score:114.9 best_domain_score:114.5 name:PrsW-protease;
sprot_desc Protease PrsW;
sprot_id sp|P50738|PRSW_BACSU;
sprot_target db:uniprot_sprot|sp|P50738|PRSW_BACSU 1 208 evalue:1.4e-52 qcov:92.90 identity:50.00;
tm_num 7;
133553 134227 transmembrane_helix
ID metaerg.pl|01995
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o133562-133615i133649-133717o133760-133828i133847-133915o133928-133996i134030-134098o134108-134161i;
134619 135302 CDS
ID metaerg.pl|01996
allec_ids 2.7.4.25; 2.7.4.14;
allgo_ids GO:0005524; GO:0016887; GO:0005737; GO:0004127; GO:0006220;
allko_ids K13799; K00945; K01918;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582792.1 1 227 evalue:1.3e-110 qcov:100.00 identity:90.70;
kegg_pathway_id 00770; 00240; 00410;
kegg_pathway_name Pantothenate and CoA biosynthesis; Pyrimidine metabolism; beta-Alanine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY0-163; PWY0-162; PWY-5687; P1-PWY; PRPP-PWY;
metacyc_pathway_name ; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; ; ; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type ; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ; ; Super-Pathways;;
pfam_acc PF13207; PF13238; PF13671; PF00005; PF02224; PF13189; PF01202;
pfam_desc AAA domain; AAA domain; AAA domain; ABC transporter; Cytidylate kinase; Cytidylate kinase-like family; Shikimate kinase;
pfam_id AAA_17; AAA_18; AAA_33; ABC_tran; Cytidylate_kin; Cytidylate_kin2; SKI;
pfam_target db:Pfam-A.hmm|PF13207.6 evalue:1.9e-06 score:27.6 best_domain_score:24.1 name:AAA_17; db:Pfam-A.hmm|PF13238.6 evalue:5.2e-07 score:29.5 best_domain_score:25.5 name:AAA_18; db:Pfam-A.hmm|PF13671.6 evalue:2.1e-06 score:27.2 best_domain_score:25.2 name:AAA_33; db:Pfam-A.hmm|PF00005.27 evalue:1e-05 score:25.3 best_domain_score:21.2 name:ABC_tran; db:Pfam-A.hmm|PF02224.18 evalue:5.9e-71 score:237.8 best_domain_score:237.6 name:Cytidylate_kin; db:Pfam-A.hmm|PF13189.6 evalue:2.4e-09 score:36.8 best_domain_score:35.2 name:Cytidylate_kin2; db:Pfam-A.hmm|PF01202.22 evalue:4.4e-06 score:26.1 best_domain_score:20.1 name:SKI;
sprot_desc Cytidylate kinase;
sprot_id sp|B7GHN1|KCY_ANOFW;
sprot_target db:uniprot_sprot|sp|B7GHN1|KCY_ANOFW 1 223 evalue:3.1e-63 qcov:98.20 identity:55.60;
tigrfam_acc TIGR00017;
tigrfam_desc cytidylate kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name cmk;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00017 evalue:2.4e-75 score:252.1 best_domain_score:251.9 name:TIGR00017;
135295 135885 CDS
ID metaerg.pl|01997
allec_ids 2.3.1.n4;
allgo_ids GO:0016746; GO:0005886; GO:0003841; GO:0006654;
allko_ids K13512; K13510; K00655;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583250.1 5 196 evalue:1.9e-102 qcov:98.00 identity:98.40;
kegg_pathway_id 00561; 00564; 00565;
kegg_pathway_name Glycerolipid metabolism; Glycerophospholipid metabolism; Ether lipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF01553;
pfam_desc Acyltransferase;
pfam_id Acyltransferase;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:4.1e-24 score:84.0 best_domain_score:83.6 name:Acyltransferase;
sprot_desc 1-acyl-sn-glycerol-3-phosphate acyltransferase;
sprot_id sp|O07584|PLSC_BACSU;
sprot_target db:uniprot_sprot|sp|O07584|PLSC_BACSU 23 193 evalue:2.9e-17 qcov:87.20 identity:36.10;
135973 137127 CDS
ID metaerg.pl|01998
allgo_ids GO:0003676; GO:0022627; GO:0003729; GO:0003735; GO:0006412;
allko_ids K00962; K03049; K03022; K12818; K02945;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582790.1 1 384 evalue:1.7e-203 qcov:100.00 identity:98.70;
kegg_pathway_id 03020; 00230; 00240; 03010;
kegg_pathway_name RNA polymerase; Purine metabolism; Pyrimidine metabolism; Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF09883; PF00575; PF13509;
pfam_desc Uncharacterized protein conserved in archaea (DUF2110); S1 RNA binding domain; S1 domain;
pfam_id DUF2110; S1; S1_2;
pfam_target db:Pfam-A.hmm|PF09883.9 evalue:2.1e-06 score:26.7 best_domain_score:14.3 name:DUF2110; db:Pfam-A.hmm|PF00575.23 evalue:1.6e-73 score:242.3 best_domain_score:85.0 name:S1; db:Pfam-A.hmm|PF13509.6 evalue:6.4e-06 score:25.4 best_domain_score:12.6 name:S1_2;
sprot_desc 30S ribosomal protein S1 homolog;
sprot_id sp|P38494|RS1H_BACSU;
sprot_target db:uniprot_sprot|sp|P38494|RS1H_BACSU 1 383 evalue:6.1e-128 qcov:99.70 identity:62.80;
137401 138717 CDS
ID metaerg.pl|01999
allgo_ids GO:0005524; GO:0016887; GO:0005525; GO:0042254;
allko_ids K00860; K00956; K00955; K03977;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582788.1 1 438 evalue:2.6e-245 qcov:100.00 identity:97.90;
kegg_pathway_id 00920; 00450; 00230;
kegg_pathway_name Sulfur metabolism; Selenoamino acid metabolism; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00005; PF04548; PF02492; PF00350; PF02421; PF00009; PF14714; PF01926; PF10662; PF08477; PF03193;
pfam_desc ABC transporter; AIG1 family; CobW/HypB/UreG, nucleotide-binding domain; Dynamin family; Ferrous iron transport protein B; Elongation factor Tu GTP binding domain; KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; 50S ribosome-binding GTPase; Ethanolamine utilisation - propanediol utilisation; Ras of Complex, Roc, domain of DAPkinase; RsgA GTPase;
pfam_id ABC_tran; AIG1; cobW; Dynamin_N; FeoB_N; GTP_EFTU; KH_dom-like; MMR_HSR1; PduV-EutP; Roc; RsgA_GTPase;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:8.3e-06 score:25.6 best_domain_score:12.9 name:ABC_tran; db:Pfam-A.hmm|PF04548.16 evalue:2.7e-15 score:55.5 best_domain_score:31.3 name:AIG1; db:Pfam-A.hmm|PF02492.19 evalue:1.5e-06 score:27.2 best_domain_score:21.4 name:cobW; db:Pfam-A.hmm|PF00350.23 evalue:7.8e-15 score:54.6 best_domain_score:19.5 name:Dynamin_N; db:Pfam-A.hmm|PF02421.18 evalue:1.5e-27 score:95.2 best_domain_score:52.1 name:FeoB_N; db:Pfam-A.hmm|PF00009.27 evalue:6.4e-21 score:74.0 best_domain_score:35.8 name:GTP_EFTU; db:Pfam-A.hmm|PF14714.6 evalue:1e-34 score:117.9 best_domain_score:113.5 name:KH_dom-like; db:Pfam-A.hmm|PF01926.23 evalue:6.6e-55 score:183.3 best_domain_score:91.9 name:MMR_HSR1; db:Pfam-A.hmm|PF10662.9 evalue:5.9e-06 score:25.3 best_domain_score:14.9 name:PduV-EutP; db:Pfam-A.hmm|PF08477.13 evalue:1.2e-06 score:28.0 best_domain_score:12.6 name:Roc; db:Pfam-A.hmm|PF03193.16 evalue:3.8e-12 score:45.7 best_domain_score:16.3 name:RsgA_GTPase;
sprot_desc GTPase Der;
sprot_id sp|Q9KCD4|DER_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KCD4|DER_BACHD 1 438 evalue:5.6e-202 qcov:100.00 identity:77.20;
tigrfam_acc TIGR00231; TIGR00436; TIGR03594;
tigrfam_desc small GTP-binding protein domain; GTP-binding protein Era; ribosome-associated GTPase EngA;
tigrfam_mainrole Unknown function; Protein synthesis; Protein synthesis;
tigrfam_name small_GTP; era; GTPase_EngA;
tigrfam_sub1role General; Other; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:3.4e-50 score:169.2 best_domain_score:87.0 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00436 evalue:1.8e-49 score:167.7 best_domain_score:82.9 name:TIGR00436; db:TIGRFAMs.hmm|TIGR03594 evalue:7.6e-178 score:591.1 best_domain_score:590.9 name:TIGR03594;
138753 139376 CDS
ID metaerg.pl|02000
allec_ids 2.3.1.275; 2.3.1.-;
allgo_ids GO:0005886; GO:0008654; GO:0043772; GO:0016021;
allko_ids K08591;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582786.1 1 207 evalue:4.5e-102 qcov:100.00 identity:95.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5405; PWY-5972; PWY-6318; PWY-5307; PWY-6412; KDO-LIPASYN-PWY; PWY-5393; PWY-5209; PWY-5965; PWY-5400; PWY-5313; PWY-6404; CENTBENZCOA-PWY; PWY-6316; PWY-6411; PWY-5987; PWY-5268; PWY0-881; PWY-5140; PWY-84; THREOCAT-PWY; PWY-6438; PWY-5284; P3-PWY; PWY-6515; PWY-6295; ECASYN-PWY; PWY-5080; PWY-6310; PWY-5139; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; BENZCOA-PWY; PWY-5184; PWY-4801; KDO-NAGLIPASYN-PWY; PWY-6397; PWY1-3; PWY-6312; PWY-6442; PWY-6418; FASYN-INITIAL-PWY; PWYG-321; PWY-6413; PWY-6113; LPSSYN-PWY; PWY1A0-6325; PWY-6432; PWY-5437; PWY-5981; PWY-5477;
metacyc_pathway_name superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; L-phenylalanine degradation IV (mammalian, via side chain);; gentiodelphin biosynthesis;; ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; raspberry ketone biosynthesis;; methyl-coenzyme M oxidation to CO2;; fatty acid biosynthesis initiation III;; amaranthin biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; ginsenoside degradation I;; sorgoleone biosynthesis;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; cannabinoid biosynthesis;; resveratrol biosynthesis;; superpathway of L-threonine metabolism;; phenylphenalenone biosynthesis;; shisonin biosynthesis;; gallate degradation III (anaerobic);; phloridzin biosynthesis;; ; enterobacterial common antigen biosynthesis;; very long chain fatty acid biosynthesis I;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; sophorolipid biosynthesis;; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; aloesone biosynthesis I;; superpathway of (Kdo)2-lipid A biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; ginsenoside degradation III;; superpathway of mycolate biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; actinorhodin biosynthesis;; curcuminoid biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; gallotannin biosynthesis;;
metacyc_pathway_type BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; Ginsenoside-Degradation;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; METHANOGENESIS;; Fatty-acid-biosynthesis;; BETALAIN-ALKALOIDS;; ANTHOCYANIN-SYN; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; Ginsenoside-Degradation;; QUINONE-SYN;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; Super-Pathways; THREONINE-DEG;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; GALLATE-DEG;; FLAVONOID-SYN;; ; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; Lipid-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; POLYKETIDE-SYN;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Cell-Wall-Biosynthesis;; Storage-Compounds-Biosynthesis;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; TERPENOID-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; GALLOTANNINS;;
pfam_acc PF02660;
pfam_desc Glycerol-3-phosphate acyltransferase;
pfam_id G3P_acyltransf;
pfam_target db:Pfam-A.hmm|PF02660.15 evalue:4.3e-50 score:169.2 best_domain_score:169.0 name:G3P_acyltransf;
sprot_desc Glycerol-3-phosphate acyltransferase;
sprot_id sp|Q5WGU3|PLSY_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WGU3|PLSY_BACSK 3 199 evalue:2.1e-58 qcov:95.20 identity:60.60;
tigrfam_acc TIGR00023;
tigrfam_desc acyl-phosphate glycerol 3-phosphate acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name TIGR00023;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00023 evalue:4.2e-52 score:176.0 best_domain_score:175.8 name:TIGR00023;
tm_num 6;
138753 139376 transmembrane_helix
ID metaerg.pl|02001
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i138756-138824o138867-138935i138954-139022o139080-139148i139161-139220o139230-139289i;
139381 140436 CDS
ID metaerg.pl|02002
allec_ids 1.1.1.94;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0009331; GO:0047952; GO:0004367; GO:0051287; GO:0005975; GO:0046167; GO:0046168; GO:0006650; GO:0008654;
allko_ids K00006; K00057;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582784.1 1 351 evalue:6.5e-186 qcov:100.00 identity:96.30;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5667; PHOSLIPSYN2-PWY; PWY-5981; PWY4FS-7; PWY0-1319; PWY4FS-8; PHOSLIPSYN-PWY;
metacyc_pathway_name CDP-diacylglycerol biosynthesis I;; superpathway of phospholipid biosynthesis II (plants);; CDP-diacylglycerol biosynthesis III;; phosphatidylglycerol biosynthesis I (plastidic);; CDP-diacylglycerol biosynthesis II;; phosphatidylglycerol biosynthesis II (non-plastidic);; superpathway of phospholipid biosynthesis I (bacteria);;
metacyc_pathway_type CDP-diacylglycerol-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;;
pfam_acc PF02737; PF02558; PF03807; PF07991; PF03446; PF07479; PF01210;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Ketopantoate reductase PanE/ApbA; NADP oxidoreductase coenzyme F420-dependent; Acetohydroxy acid isomeroreductase, NADPH-binding domain; NAD binding domain of 6-phosphogluconate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus;
pfam_id 3HCDH_N; ApbA; F420_oxidored; IlvN; NAD_binding_2; NAD_Gly3P_dh_C; NAD_Gly3P_dh_N;
pfam_target db:Pfam-A.hmm|PF02737.18 evalue:2.5e-05 score:23.4 best_domain_score:22.3 name:3HCDH_N; db:Pfam-A.hmm|PF02558.16 evalue:1e-11 score:43.9 best_domain_score:43.2 name:ApbA; db:Pfam-A.hmm|PF03807.17 evalue:5.7e-12 score:45.3 best_domain_score:43.4 name:F420_oxidored; db:Pfam-A.hmm|PF07991.12 evalue:2.8e-07 score:29.5 best_domain_score:27.0 name:IlvN; db:Pfam-A.hmm|PF03446.15 evalue:1.7e-12 score:47.0 best_domain_score:44.9 name:NAD_binding_2; db:Pfam-A.hmm|PF07479.14 evalue:1.8e-55 score:186.4 best_domain_score:185.3 name:NAD_Gly3P_dh_C; db:Pfam-A.hmm|PF01210.23 evalue:1.1e-56 score:190.4 best_domain_score:189.7 name:NAD_Gly3P_dh_N;
sp YES;
sprot_desc Glycerol-3-phosphate dehydrogenase [NAD(P)+];
sprot_id sp|Q5WGU2|GPDA_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WGU2|GPDA_BACSK 1 333 evalue:1.7e-116 qcov:94.90 identity:65.00;
139381 139443 signal_peptide
ID metaerg.pl|02003
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
140612 140815 CDS
ID metaerg.pl|02004
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582782.1 1 67 evalue:2.4e-25 qcov:100.00 identity:100.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF10966;
pfam_desc Protein of unknown function (DUF2768);
pfam_id DUF2768;
pfam_target db:Pfam-A.hmm|PF10966.8 evalue:1e-19 score:70.0 best_domain_score:69.8 name:DUF2768;
tm_num 2;
140612 140815 transmembrane_helix
ID metaerg.pl|02005
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology o140639-140695i140732-140800o;
140846 141571 CDS
ID metaerg.pl|02006
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582780.1 1 241 evalue:3.3e-133 qcov:100.00 identity:97.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P39911|YPHF_BACSU;
sprot_target db:uniprot_sprot|sp|P39911|YPHF_BACSU 6 239 evalue:3.5e-44 qcov:97.10 identity:41.80;
140846 140899 lipoprotein_signal_peptide
ID metaerg.pl|02007
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
141785 142057 CDS
ID metaerg.pl|02008
allgo_ids GO:0003677; GO:0030261;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582778.1 1 90 evalue:9.5e-41 qcov:100.00 identity:100.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF00216; PF18291;
pfam_desc Bacterial DNA-binding protein; HU domain fused to wHTH, Ig, or Glycine-rich motif;
pfam_id Bac_DNA_binding; HU-HIG;
pfam_target db:Pfam-A.hmm|PF00216.21 evalue:4.6e-39 score:131.8 best_domain_score:131.6 name:Bac_DNA_binding; db:Pfam-A.hmm|PF18291.1 evalue:4.9e-08 score:32.3 best_domain_score:32.2 name:HU-HIG;
sprot_desc DNA-binding protein HU;
sprot_id sp|P0A3H2|DBH_BACCA;
sprot_target db:uniprot_sprot|sp|P0A3H2|DBH_BACCA 1 90 evalue:3.8e-36 qcov:100.00 identity:87.80;
142496 143170 CDS
ID metaerg.pl|02009
allec_ids 3.5.4.16;
allgo_ids GO:0005525; GO:0003934; GO:0008270; GO:0035998; GO:0006730; GO:0046654;
allko_ids K01495;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583249.1 38 224 evalue:6.1e-97 qcov:83.50 identity:96.30;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5664; PWY-6147; ALL-CHORISMATE-PWY; PWY-5663; FOLSYN-PWY;
metacyc_pathway_name erythro-tetrahydrobiopterin biosynthesis II;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; superpathway of chorismate metabolism;; erythro-tetrahydrobiopterin biosynthesis I;; superpathway of tetrahydrofolate biosynthesis and salvage;;
metacyc_pathway_type Tetrahydrobiopterin-Biosynthesis;; 6-HM-Dihydropterin-PP-Biosynthesis;; Super-Pathways;; Tetrahydrobiopterin-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;;
pfam_acc PF01227;
pfam_desc GTP cyclohydrolase I;
pfam_id GTP_cyclohydroI;
pfam_target db:Pfam-A.hmm|PF01227.22 evalue:6.6e-82 score:272.5 best_domain_score:272.0 name:GTP_cyclohydroI;
sprot_desc GTP cyclohydrolase 1;
sprot_id sp|Q9KCC7|GCH1_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KCC7|GCH1_BACHD 38 224 evalue:2.0e-86 qcov:83.50 identity:81.30;
tigrfam_acc TIGR00063;
tigrfam_desc GTP cyclohydrolase I;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name folE;
tigrfam_sub1role Folic acid;
tigrfam_target db:TIGRFAMs.hmm|TIGR00063 evalue:5.6e-79 score:263.0 best_domain_score:262.7 name:TIGR00063;
143285 143503 CDS
ID metaerg.pl|02010
allgo_ids GO:0003723; GO:0006353; GO:0006355;
allko_ids K06285;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582775.1 1 72 evalue:1.7e-32 qcov:100.00 identity:100.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF02081;
pfam_desc Tryptophan RNA-binding attenuator protein;
pfam_id TrpBP;
pfam_target db:Pfam-A.hmm|PF02081.15 evalue:3.7e-40 score:134.8 best_domain_score:134.7 name:TrpBP;
sprot_desc Transcription attenuation protein MtrB;
sprot_id sp|P19466|MTRB_BACSU;
sprot_target db:uniprot_sprot|sp|P19466|MTRB_BACSU 4 70 evalue:1.6e-24 qcov:93.10 identity:77.60;
143674 144402 CDS
ID metaerg.pl|02011
allgo_ids GO:0009234;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582773.1 1 242 evalue:1.2e-119 qcov:100.00 identity:93.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF07307;
pfam_desc Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1;
pfam_id HEPPP_synt_1;
pfam_target db:Pfam-A.hmm|PF07307.11 evalue:3.3e-41 score:140.4 best_domain_score:140.1 name:HEPPP_synt_1;
144407 145111 CDS
ID metaerg.pl|02012
allec_ids 2.1.1.163; 2.1.1.-;
allgo_ids GO:0008168; GO:0102955; GO:0009234;
allko_ids K00568; K00599; K03183;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582771.1 1 234 evalue:1.4e-128 qcov:100.00 identity:97.90;
kegg_pathway_id 00626; 00450; 00380; 00340; 00150; 00130; 00350;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism; Ubiquinone biosynthesis; Tyrosine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5844; PWY-6151; PWY-5855; PWY-5209; PWY-6303; PWY-5857; METH-ACETATE-PWY; PWY-6263; PWY-6154; MENAQUINONESYN-PWY; PWY-6424; UBISYN-PWY; PWY-6142; PWY-5856; PWY-5897; PWY-1581; PWY-5116; CO2FORM-PWY; PWY-5896; PWY-5891; PWY-5845; PWY-5849; PWY-6519; PWY-5773; PWY-5328; PWY-5898; METHIONINE-DEG1-PWY; PWY-6427; PWY-6395; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-5840; PWY-6292; PWY-5479; PWY-5987; PWY-6477; PWY-5467; PWY-5839; CODH-PWY; PWY-6575; PWY-6442; PWY-5850; PWY-5899; PWY-5838; PWY-4021; PWY-5041; PWY-5892; PWY-6153; PWY-3542; ALL-CHORISMATE-PWY; PWY-5876; PWY-5890; PWY-1061; PWY-5864; PWY-5895; PWY-5975; PWY-5729; PWY-6113; PWYG-321; PWY-5305; PWY-1422;
metacyc_pathway_name menaquinol-9 biosynthesis;; S-adenosyl-L-methionine cycle I;; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; methanogenesis from acetate;; superpathway of menaquinol-8 biosynthesis II;; autoinducer AI-2 biosynthesis II (Vibrio);; menaquinol-8 biosynthesis;; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; superpathway of menaquinol-11 biosynthesis;; plastoquinol-9 biosynthesis I;; sakuranetin biosynthesis;; methanogenesis from methanol;; superpathway of menaquinol-10 biosynthesis;; menaquinol-11 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; menaquinol-6 biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; superpathway of menaquinol-12 biosynthesis;; L-methionine degradation I (to L-homocysteine);; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; xanthohumol biosynthesis;; superpathway of menaquinol-7 biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; gibberellin inactivation II (methylation);; gramine biosynthesis;; menaquinol-7 biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; menaquinol-12 biosynthesis;; autoinducer AI-2 biosynthesis I;; choline biosynthesis II;; superpathway of chorismate metabolism;; magnoflorine biosynthesis;; menaquinol-10 biosynthesis;; homogalacturonan biosynthesis;; superpathway of plastoquinol biosynthesis;; menaquinol-13 biosynthesis;; furaneol and mesifurane biosynthesis;; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; bixin biosynthesis;; vitamin E biosynthesis (tocopherols);;
metacyc_pathway_type Menaquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Autoinducer-Biosynthesis;; Menaquinone-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Plastoquinone-Biosynthesis;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; C1-COMPOUNDS; METHANOGENESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; METHIONINE-DEG;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; Menaquinone-Biosynthesis;; Autotrophic-CO2-Fixation;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Menaquinone-Biosynthesis;; Autoinducer-Biosynthesis;; Choline-Biosynthesis;; Super-Pathways;; ISOQUINOLINE-ALKALOIDS;; Menaquinone-Biosynthesis;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis;; SECONDARY-METABOLITE-BIOSYNTHESIS;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; APOCAROTENOID-SYN;; Quinone-Biosynthesis; Vitamin-Biosynthesis;;
pfam_acc PF08241; PF08242; PF13489; PF13649; PF13847; PF07021; PF01135; PF01209;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methionine biosynthesis protein MetW; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); ubiE/COQ5 methyltransferase family;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; MetW; PCMT; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:1.1e-20 score:73.3 best_domain_score:72.6 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.5e-11 score:44.1 best_domain_score:43.3 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:1.5e-14 score:53.4 best_domain_score:52.9 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:7.9e-24 score:83.4 best_domain_score:82.1 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:2.9e-15 score:55.6 best_domain_score:55.2 name:Methyltransf_31; db:Pfam-A.hmm|PF07021.12 evalue:4.2e-05 score:22.5 best_domain_score:21.9 name:MetW; db:Pfam-A.hmm|PF01135.19 evalue:0.00011 score:21.2 best_domain_score:20.8 name:PCMT; db:Pfam-A.hmm|PF01209.18 evalue:2.1e-93 score:311.1 best_domain_score:311.0 name:Ubie_methyltran;
sprot_desc Demethylmenaquinone methyltransferase;
sprot_id sp|B1HTA6|MENG_LYSSC;
sprot_target db:uniprot_sprot|sp|B1HTA6|MENG_LYSSC 1 231 evalue:1.2e-89 qcov:98.70 identity:68.40;
tigrfam_acc TIGR01934;
tigrfam_desc ubiquinone/menaquinone biosynthesis methyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name MenG_MenH_UbiE;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR01934 evalue:3.6e-79 score:264.3 best_domain_score:264.2 name:TIGR01934;
145121 145987 CDS
ID metaerg.pl|02013
allec_ids 2.5.1.-;
allgo_ids GO:0016021; GO:0016765;
allko_ids K03179;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582769.1 1 288 evalue:2.7e-145 qcov:100.00 identity:95.80;
kegg_pathway_id 00130;
kegg_pathway_name Ubiquinone biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5027; PWY-5893; PWY-6383; PWY-6129; PWY-5133; PWY-5864; PWY-6403; PWY-5817; PWY-5134; PWY-6520; PWY-5899; PWY-5838; PWY-5064; PWY-4502; PWY-5806; PWY-6404; PWY-5135; PWY-5140; PWY-5701; PWY-5068; PWY-2681; PWY-5896; PWY-5862; PWY-5845; PWY-5816; PWY-5863; PWY-5898; PWY-6263; PWY-5132; PWY-5897; PWY-5808; POLYISOPRENSYN-PWY; PWY-5805; PWY-5783; PWY-5861; PWY-724; PWY-6262;
metacyc_pathway_name phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; carrageenan biosynthesis;; dodecaprenyl diphosphate biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; xanthohumol biosynthesis;; cannabinoid biosynthesis;; shikonin biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-12 biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; lupulone and humulone biosynthesis;; superpathway of menaquinol-11 biosynthesis;; hyperforin and adhyperforin biosynthesis;; polyisoprenoid biosynthesis (E. coli);; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; demethylmenaquinol-8 biosynthesis II;;
metacyc_pathway_type Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Lipid-Biosynthesis;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Polysaccharides-Biosynthesis;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Polyprenyl-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; PRENYLFLAVONOID-SYN;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;;
pfam_acc PF01040;
pfam_desc UbiA prenyltransferase family;
pfam_id UbiA;
pfam_target db:Pfam-A.hmm|PF01040.18 evalue:8.7e-54 score:181.7 best_domain_score:181.2 name:UbiA;
tigrfam_acc TIGR01475;
tigrfam_desc putative 4-hydroxybenzoate polyprenyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ubiA_other;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR01475 evalue:1.1e-96 score:322.7 best_domain_score:322.5 name:TIGR01475;
tm_num 8;
145121 145987 transmembrane_helix
ID metaerg.pl|02014
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
topology i145169-145237o145250-145303i145361-145429o145439-145507i145520-145588o145598-145666i145760-145855o145913-145981i;
146009 146875 CDS
ID metaerg.pl|02015
allec_ids 4.2.1.151;
allgo_ids GO:0016836; GO:0009234;
allko_ids K11782;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582767.1 1 288 evalue:8.5e-152 qcov:100.00 identity:94.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
pfam_acc PF02621;
pfam_desc Menaquinone biosynthesis;
pfam_id VitK2_biosynth;
pfam_target db:Pfam-A.hmm|PF02621.14 evalue:8.6e-65 score:218.1 best_domain_score:217.9 name:VitK2_biosynth;
sprot_desc Chorismate dehydratase;
sprot_id sp|Q9L0T8|MQNA_STRCO;
sprot_target db:uniprot_sprot|sp|Q9L0T8|MQNA_STRCO 5 242 evalue:3.1e-31 qcov:82.60 identity:32.80;
146872 147843 CDS
ID metaerg.pl|02016
allec_ids 2.5.1.30;
allgo_ids GO:0008299; GO:0036422; GO:0046872; GO:0016765; GO:0009234; GO:0030435;
allko_ids K02523; K00805;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582765.1 1 323 evalue:1.1e-171 qcov:100.00 identity:96.60;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY-5807; PWY-5840;
metacyc_pathway_name heptaprenyl diphosphate biosynthesis;; superpathway of menaquinol-7 biosynthesis;;
metacyc_pathway_type Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:7.2e-68 score:227.6 best_domain_score:227.3 name:polyprenyl_synt;
sprot_desc Heptaprenyl diphosphate synthase component 2;
sprot_id sp|P31114|HEPS2_BACSU;
sprot_target db:uniprot_sprot|sp|P31114|HEPS2_BACSU 1 323 evalue:3.2e-93 qcov:100.00 identity:53.30;
tigrfam_acc TIGR02748;
tigrfam_desc heptaprenyl diphosphate synthase component II;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name GerC3_HepT;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR02748 evalue:2.2e-141 score:469.7 best_domain_score:469.5 name:TIGR02748;
147959 148396 CDS
ID metaerg.pl|02017
allec_ids 2.7.4.6;
allgo_ids GO:0005737; GO:0005524; GO:0046872; GO:0004550; GO:0006241; GO:0006183; GO:0006228;
allko_ids K00940;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107582762.1 1 145 evalue:2.0e-72 qcov:100.00 identity:97.90;
kegg_pathway_id 00240; 00230;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
metacyc_pathway_id PWY0-166; PRPP-PWY; PWY-6545; PWY0-163; PWY-5687; PWY-6125; PPGPPMET-PWY; PWY-6126; DENOVOPURINE2-PWY; PWY0-162;
metacyc_pathway_name superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);; superpathway of histidine, purine, and pyrimidine biosynthesis;; pyrimidine deoxyribonucleotides de novo biosynthesis III;; ; ; superpathway of guanosine nucleotides de novo biosynthesis II;; ppGpp biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;;
metacyc_pathway_type Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;; Super-Pathways;; Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;; ; ; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Metabolic-Regulators;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF00334;
pfam_desc Nucleoside diphosphate kinase;
pfam_id NDK;
pfam_target db:Pfam-A.hmm|PF00334.19 evalue:1.6e-56 score:189.3 best_domain_score:189.1 name:NDK;
sprot_desc Nucleoside diphosphate kinase;
sprot_id sp|Q5KXU2|NDK_GEOKA;
sprot_target db:uniprot_sprot|sp|Q5KXU2|NDK_GEOKA 2 144 evalue:7.9e-52 qcov:98.60 identity:67.80;
148845 148639 CDS
ID metaerg.pl|02018
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0541709; 86.596; 0.243611; 8.12694; 78.1713;
>Feature NODE_9_length_146778_cov_15.8091
337 2 CDS
ID metaerg.pl|02019
allec_ids 5.4.99.18; 4.1.1.21;
allgo_ids GO:0006189; GO:0034023; GO:0004638; GO:0009152;
allko_ids K01588;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Poseidonocella;s__Poseidonocella pacifica;
genomedb_acc GCF_900111875.1;
genomedb_target db:genomedb|GCF_900111875.1|WP_092064376.1 1 112 evalue:5.3e-49 qcov:100.00 identity:88.40;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-841; PWY-6123; PRPP-PWY; DENOVOPURINE2-PWY; PWY-6124;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis I;; inosine-5'-phosphate biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;; inosine-5'-phosphate biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;;
pfam_acc PF00731;
pfam_desc AIR carboxylase;
pfam_id AIRC;
pfam_target db:Pfam-A.hmm|PF00731.20 evalue:9.5e-50 score:167.3 best_domain_score:167.1 name:AIRC;
sprot_desc N5-carboxyaminoimidazole ribonucleotide mutase;
sprot_id sp|Q9KVT7|PURE_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KVT7|PURE_VIBCH 6 112 evalue:2.1e-36 qcov:95.50 identity:70.10;
tigrfam_acc TIGR01162;
tigrfam_desc phosphoribosylaminoimidazole carboxylase, catalytic subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purE;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01162 evalue:1.2e-47 score:160.5 best_domain_score:160.3 name:TIGR01162;
869 444 CDS
ID metaerg.pl|02020
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479183.1 17 141 evalue:3.2e-43 qcov:88.70 identity:64.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF14347;
pfam_desc Domain of unknown function (DUF4399);
pfam_id DUF4399;
pfam_target db:Pfam-A.hmm|PF14347.6 evalue:9.6e-34 score:114.9 best_domain_score:114.6 name:DUF4399;
sp YES;
444 506 signal_peptide
ID metaerg.pl|02021
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
1219 1001 CDS
ID metaerg.pl|02022
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06304.1 1 72 evalue:8.7e-21 qcov:100.00 identity:77.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF04325;
pfam_desc Protein of unknown function (DUF465);
pfam_id DUF465;
pfam_target db:Pfam-A.hmm|PF04325.13 evalue:6e-16 score:57.5 best_domain_score:56.9 name:DUF465;
1397 1810 CDS
ID metaerg.pl|02023
allgo_ids GO:0005737; GO:0050821;
allko_ids K04081;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068306850.1 1 136 evalue:7.4e-53 qcov:99.30 identity:75.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00011;
pfam_desc Hsp20/alpha crystallin family;
pfam_id HSP20;
pfam_target db:Pfam-A.hmm|PF00011.21 evalue:2.5e-15 score:55.7 best_domain_score:55.4 name:HSP20;
sprot_desc Small heat shock protein IbpB;
sprot_id sp|A8ACJ9|IBPB_CITK8;
sprot_target db:uniprot_sprot|sp|A8ACJ9|IBPB_CITK8 10 125 evalue:7.5e-20 qcov:84.70 identity:41.20;
1847 2068 CDS
ID metaerg.pl|02024
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06306.1 1 73 evalue:2.0e-20 qcov:100.00 identity:69.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF06620;
pfam_desc Protein of unknown function (DUF1150);
pfam_id DUF1150;
pfam_target db:Pfam-A.hmm|PF06620.11 evalue:1.7e-18 score:65.8 best_domain_score:65.5 name:DUF1150;
2162 3259 CDS
ID metaerg.pl|02025
allec_ids 4.1.1.96;
allgo_ids GO:0003824; GO:0005737; GO:0016831; GO:0042803; GO:0030170; GO:0045312; GO:0008295;
allko_ids K01586; K13747;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06300.1 1 365 evalue:1.7e-189 qcov:100.00 identity:88.50;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00278;
pfam_desc Pyridoxal-dependent decarboxylase, C-terminal sheet domain;
pfam_id Orn_DAP_Arg_deC;
pfam_target db:Pfam-A.hmm|PF00278.22 evalue:9.3e-08 score:31.5 best_domain_score:31.2 name:Orn_DAP_Arg_deC;
sprot_desc Carboxynorspermidine/carboxyspermidine decarboxylase;
sprot_id sp|Q5QCP2|NSPC_HERAR;
sprot_target db:uniprot_sprot|sp|Q5QCP2|NSPC_HERAR 1 365 evalue:4.6e-141 qcov:100.00 identity:63.80;
3275 4513 CDS
ID metaerg.pl|02026
allec_ids 1.5.1.43;
allgo_ids GO:0016491; GO:0055114; GO:0006596;
allko_ids K13746;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06299.1 1 412 evalue:2.3e-219 qcov:100.00 identity:88.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF16653; PF03435;
pfam_desc Saccharopine dehydrogenase C-terminal domain; Saccharopine dehydrogenase NADP binding domain;
pfam_id Sacchrp_dh_C; Sacchrp_dh_NADP;
pfam_target db:Pfam-A.hmm|PF16653.5 evalue:7.5e-23 score:81.2 best_domain_score:80.8 name:Sacchrp_dh_C; db:Pfam-A.hmm|PF03435.18 evalue:5.7e-34 score:116.4 best_domain_score:115.7 name:Sacchrp_dh_NADP;
sp YES;
sprot_desc Carboxynorspermidine synthase;
sprot_id sp|P0DPE4|CANSD_VIBAX;
sprot_target db:uniprot_sprot|sp|P0DPE4|CANSD_VIBAX 5 403 evalue:2.1e-102 qcov:96.80 identity:46.20;
3275 3328 signal_peptide
ID metaerg.pl|02027
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
4681 5337 CDS
ID metaerg.pl|02028
allgo_ids GO:0003700; GO:0006355; GO:0003677; GO:0045892;
allko_ids K13654;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28124.1 1 218 evalue:1.4e-90 qcov:100.00 identity:79.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:1.5e-18 score:66.7 best_domain_score:66.7 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:5.2e-14 score:50.9 best_domain_score:49.6 name:GntR;
sprot_desc HTH-type transcriptional regulator McbR;
sprot_id sp|P76114|MCBR_ECOLI;
sprot_target db:uniprot_sprot|sp|P76114|MCBR_ECOLI 14 218 evalue:7.5e-14 qcov:94.00 identity:26.90;
5866 5393 CDS
ID metaerg.pl|02029
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07351.1 5 138 evalue:2.7e-19 qcov:85.40 identity:47.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
tm_num 2;
5866 5393 transmembrane_helix
ID metaerg.pl|02030
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i5483-5551o5579-5647i;
6195 5863 CDS
ID metaerg.pl|02031
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07352.1 14 110 evalue:4.9e-15 qcov:88.20 identity:55.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
tm_num 1;
6195 5863 transmembrane_helix
ID metaerg.pl|02032
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i6118-6186o;
7116 6298 CDS
ID metaerg.pl|02033
allec_ids 1.17.1.8;
allgo_ids GO:0008839; GO:0009089; GO:0055114; GO:0005737; GO:0051287; GO:0050661; GO:0016726; GO:0019877;
allko_ids K00215;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Mangrovicoccus;s__Mangrovicoccus sp003254465;
genomedb_acc GCF_003254465.1;
genomedb_target db:genomedb|GCF_003254465.1|WP_111404942.1 1 270 evalue:7.9e-99 qcov:99.30 identity:71.50;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF05173; PF01113;
pfam_desc Dihydrodipicolinate reductase, C-terminus; Dihydrodipicolinate reductase, N-terminus;
pfam_id DapB_C; DapB_N;
pfam_target db:Pfam-A.hmm|PF05173.14 evalue:1.6e-40 score:137.2 best_domain_score:136.7 name:DapB_C; db:Pfam-A.hmm|PF01113.20 evalue:1.5e-31 score:108.3 best_domain_score:106.8 name:DapB_N;
sprot_desc 4-hydroxy-tetrahydrodipicolinate reductase;
sprot_id sp|Q1GKJ6|DAPB_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GKJ6|DAPB_RUEST 1 270 evalue:2.4e-94 qcov:99.30 identity:65.90;
tigrfam_acc TIGR00036;
tigrfam_desc 4-hydroxy-tetrahydrodipicolinate reductase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapB;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00036 evalue:5.8e-75 score:251.4 best_domain_score:251.3 name:TIGR00036;
7182 7667 CDS
ID metaerg.pl|02034
allgo_ids GO:0006364; GO:0005737; GO:0030490;
allko_ids K02834;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246638.1 17 147 evalue:4.2e-47 qcov:81.40 identity:74.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF02033;
pfam_desc Ribosome-binding factor A;
pfam_id RBFA;
pfam_target db:Pfam-A.hmm|PF02033.18 evalue:2.6e-24 score:84.9 best_domain_score:84.7 name:RBFA;
sprot_desc Ribosome-binding factor A;
sprot_id sp|A1B5T9|RBFA_PARDP;
sprot_target db:uniprot_sprot|sp|A1B5T9|RBFA_PARDP 17 153 evalue:2.3e-44 qcov:85.10 identity:65.70;
tigrfam_acc TIGR00082;
tigrfam_desc ribosome-binding factor A;
tigrfam_mainrole Transcription;
tigrfam_name rbfA;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR00082 evalue:1.6e-14 score:53.6 best_domain_score:53.2 name:TIGR00082;
7664 8479 CDS
ID metaerg.pl|02035
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH27928.1 27 264 evalue:6.9e-95 qcov:87.80 identity:71.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF09992;
pfam_desc Phosphodiester glycosidase;
pfam_id NAGPA;
pfam_target db:Pfam-A.hmm|PF09992.9 evalue:3.6e-18 score:65.6 best_domain_score:65.2 name:NAGPA;
sp YES;
7664 7777 signal_peptide
ID metaerg.pl|02036
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
8576 10027 CDS
ID metaerg.pl|02037
allec_ids 2.7.7.-;
allgo_ids GO:0005524; GO:0000287; GO:0016779;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07311.1 1 483 evalue:1.5e-185 qcov:100.00 identity:68.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-5354; PWY-882; THISYN-PWY; PHOSLIPSYN2-PWY; PWY4FS-4; PWY-6476;
metacyc_pathway_name ; L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of thiamine diphosphate biosynthesis I;; superpathway of phospholipid biosynthesis II (plants);; phosphatidylcholine biosynthesis IV;; cytidylyl molybdenum cofactor biosynthesis;;
metacyc_pathway_type ; Ascorbate-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylcholineBiosynthesis;; Cofactor-Biosynthesis;;
pfam_acc PF02696;
pfam_desc Uncharacterized ACR, YdiU/UPF0061 family;
pfam_id UPF0061;
pfam_target db:Pfam-A.hmm|PF02696.14 evalue:2.3e-109 score:365.5 best_domain_score:365.3 name:UPF0061;
sprot_desc hypothetical protein;
sprot_id sp|A3PII0|SELO_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PII0|SELO_RHOS1 2 483 evalue:1.8e-156 qcov:99.80 identity:60.70;
11119 10034 CDS
ID metaerg.pl|02038
allgo_ids GO:0008641;
allko_ids K03148;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07407.1 1 349 evalue:6.3e-136 qcov:96.70 identity:70.80;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00899;
pfam_desc ThiF family;
pfam_id ThiF;
pfam_target db:Pfam-A.hmm|PF00899.21 evalue:9.4e-62 score:207.8 best_domain_score:207.4 name:ThiF;
tm_num 4;
11119 10034 transmembrane_helix
ID metaerg.pl|02039
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology o10043-10099i10112-10180o10208-10267i10424-10492o;
11590 11126 CDS
ID metaerg.pl|02040
allec_ids 3.6.1.23;
allgo_ids GO:0004170; GO:0000287; GO:0006226; GO:0046080;
allko_ids K01520;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07408.1 2 153 evalue:5.4e-60 qcov:98.70 identity:75.00;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY0-166; PWY-6545;
metacyc_pathway_name superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);; pyrimidine deoxyribonucleotides de novo biosynthesis III;;
metacyc_pathway_type Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;; Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;;
pfam_acc PF00692;
pfam_desc dUTPase;
pfam_id dUTPase;
pfam_target db:Pfam-A.hmm|PF00692.19 evalue:1.6e-26 score:91.8 best_domain_score:91.2 name:dUTPase;
sprot_desc Deoxyuridine 5'-triphosphate nucleotidohydrolase;
sprot_id sp|Q3J0B2|DUT_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J0B2|DUT_RHOS4 4 152 evalue:1.7e-57 qcov:96.80 identity:71.10;
tigrfam_acc TIGR00576;
tigrfam_desc dUTP diphosphatase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name dut;
tigrfam_sub1role 2'-Deoxyribonucleotide metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR00576 evalue:2e-49 score:166.2 best_domain_score:165.9 name:TIGR00576;
12786 11587 CDS
ID metaerg.pl|02041
allec_ids 4.1.1.36; 6.3.2.5; 4.1.1.36 6.3.2.5;
allgo_ids GO:0003824; GO:0010181; GO:0046872; GO:0004632; GO:0004633; GO:0015937; GO:0015941;
allko_ids K13038;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE44946.1 1 395 evalue:2.4e-181 qcov:99.00 identity:83.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-4221; COA-PWY; PANTOSYN-PWY; PWY-4242;
metacyc_pathway_name superpathway of coenzyme A biosynthesis II (plants);; coenzyme A biosynthesis I (prokaryotic);; superpathway of coenzyme A biosynthesis I (bacteria);; ;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis;; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; ;
pfam_acc PF04127; PF02441;
pfam_desc DNA / pantothenate metabolism flavoprotein; Flavoprotein;
pfam_id DFP; Flavoprotein;
pfam_target db:Pfam-A.hmm|PF04127.15 evalue:2.5e-66 score:222.3 best_domain_score:219.0 name:DFP; db:Pfam-A.hmm|PF02441.19 evalue:1.3e-41 score:141.2 best_domain_score:140.5 name:Flavoprotein;
sp YES;
sprot_desc Coenzyme A biosynthesis bifunctional protein CoaBC;
sprot_id sp|Q8DDX8|COABC_VIBVU;
sprot_target db:uniprot_sprot|sp|Q8DDX8|COABC_VIBVU 2 396 evalue:7.4e-84 qcov:99.00 identity:44.80;
tigrfam_acc TIGR00521;
tigrfam_desc phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name coaBC_dfp;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00521 evalue:7.9e-115 score:383.2 best_domain_score:383.0 name:TIGR00521;
11587 11715 signal_peptide
ID metaerg.pl|02042
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
12852 13259 CDS
ID metaerg.pl|02043
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
sp YES;
tm_num 2;
12852 12959 signal_peptide
ID metaerg.pl|02044
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
12852 13259 transmembrane_helix
ID metaerg.pl|02045
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i12888-12956o13029-13097i;
14558 13161 CDS
ID metaerg.pl|02046
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06962.1 1 463 evalue:1.3e-149 qcov:99.60 identity:58.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF13469;
pfam_desc Sulfotransferase family;
pfam_id Sulfotransfer_3;
pfam_target db:Pfam-A.hmm|PF13469.6 evalue:1.2e-06 score:28.4 best_domain_score:12.2 name:Sulfotransfer_3;
16269 14563 CDS
ID metaerg.pl|02047
allgo_ids GO:0008375; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE45575.1 9 565 evalue:1.2e-237 qcov:98.10 identity:72.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF02485;
pfam_desc Core-2/I-Branching enzyme;
pfam_id Branch;
pfam_target db:Pfam-A.hmm|PF02485.21 evalue:4.6e-19 score:68.1 best_domain_score:67.4 name:Branch;
17243 16266 CDS
ID metaerg.pl|02048
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06964.1 1 325 evalue:3.4e-141 qcov:100.00 identity:74.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF13704;
pfam_desc Glycosyl transferase family 2;
pfam_id Glyco_tranf_2_4;
pfam_target db:Pfam-A.hmm|PF13704.6 evalue:1.6e-28 score:98.3 best_domain_score:97.5 name:Glyco_tranf_2_4;
18384 17359 CDS
ID metaerg.pl|02049
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06965.1 1 341 evalue:3.9e-143 qcov:100.00 identity:71.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF13704;
pfam_desc Glycosyl transferase family 2;
pfam_id Glyco_tranf_2_4;
pfam_target db:Pfam-A.hmm|PF13704.6 evalue:3e-27 score:94.2 best_domain_score:92.8 name:Glyco_tranf_2_4;
19403 18510 CDS
ID metaerg.pl|02050
allec_ids 2.7.7.9;
allgo_ids GO:0009058; GO:0016779; GO:0003983; GO:0006011;
allko_ids K00975; K00677; K01835; K00640; K00674; K00963; K02536; K04042; K01840; K00966; K11528; K05822; K00972;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06966.1 1 297 evalue:3.6e-137 qcov:100.00 identity:82.50;
kegg_pathway_id 00272; 00500; 00521; 00540; 00920; 00520; 00030; 00010; 00530; 00300; 00040; 00052; 00051;
kegg_pathway_name Cysteine metabolism; Starch and sucrose metabolism; Streptomycin biosynthesis; Lipopolysaccharide biosynthesis; Sulfur metabolism; Nucleotide sugars metabolism; Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Aminosugars metabolism; Lysine biosynthesis; Pentose and glucuronate interconversions; Galactose metabolism; Fructose and mannose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id SUCSYN-PWY; PWY-3821; PWY-5067; COLANSYN-PWY; PWY-3801; PWY-621; PWY-5114;
metacyc_pathway_name sucrose biosynthesis I (from photosynthesis);; D-galactose detoxification;; glycogen biosynthesis II (from UDP-D-Glucose);; colanic acid building blocks biosynthesis;; sucrose degradation II (sucrose synthase);; sucrose degradation III (sucrose invertase);; UDP-sugars interconversion;;
metacyc_pathway_type Sucrose-Biosynthesis; Super-Pathways;; Detoxification;; GLYCOGEN-BIOSYN;; Carbohydrates-Biosynthesis; Super-Pathways;; SUCROSE-DEG;; SUCROSE-DEG;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;;
pfam_acc PF00483; PF12804;
pfam_desc Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF00483.23 evalue:1.7e-23 score:82.7 best_domain_score:82.2 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:2.2e-07 score:30.6 best_domain_score:30.0 name:NTP_transf_3;
sprot_desc UTP--glucose-1-phosphate uridylyltransferase;
sprot_id sp|P27897|CELA_KOMXY;
sprot_target db:uniprot_sprot|sp|P27897|CELA_KOMXY 1 261 evalue:4.1e-79 qcov:87.90 identity:57.10;
tigrfam_acc TIGR01099;
tigrfam_desc UTP--glucose-1-phosphate uridylyltransferase;
tigrfam_mainrole Cell envelope;
tigrfam_name galU;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01099 evalue:1e-99 score:332.5 best_domain_score:332.3 name:TIGR01099;
20341 19547 CDS
ID metaerg.pl|02051
allec_ids 3.1.3.7;
allgo_ids GO:0046854; GO:0005886; GO:0008441; GO:0000287; GO:0050427; GO:0000103;
allko_ids K01082;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105318843.1 7 263 evalue:5.0e-106 qcov:97.30 identity:76.00;
kegg_pathway_id 00920;
kegg_pathway_name Sulfur metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00459;
pfam_desc Inositol monophosphatase family;
pfam_id Inositol_P;
pfam_target db:Pfam-A.hmm|PF00459.25 evalue:1.9e-46 score:158.0 best_domain_score:157.7 name:Inositol_P;
sprot_desc 3'(2'),5'-bisphosphate nucleotidase CysQ;
sprot_id sp|P26264|CYSQ_SALTY;
sprot_target db:uniprot_sprot|sp|P26264|CYSQ_SALTY 8 256 evalue:1.1e-43 qcov:94.30 identity:47.60;
tigrfam_acc TIGR01331;
tigrfam_desc 3'(2'),5'-bisphosphate nucleotidase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name bisphos_cysQ;
tigrfam_sub1role Sulfur metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR01331 evalue:9.7e-79 score:263.6 best_domain_score:263.4 name:TIGR01331;
20493 21305 CDS
ID metaerg.pl|02052
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06968.1 4 269 evalue:2.1e-107 qcov:98.50 identity:74.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01061;
pfam_desc ABC-2 type transporter;
pfam_id ABC2_membrane;
pfam_target db:Pfam-A.hmm|PF01061.24 evalue:3.2e-08 score:32.5 best_domain_score:31.8 name:ABC2_membrane;
tm_num 6;
20493 21305 transmembrane_helix
ID metaerg.pl|02053
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i20589-20657o20700-20768i20838-20906o20934-21002i21063-21122o21180-21248i;
21302 21952 CDS
ID metaerg.pl|02054
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06969.1 29 215 evalue:3.7e-67 qcov:86.60 identity:63.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF08239;
pfam_desc Bacterial SH3 domain;
pfam_id SH3_3;
pfam_target db:Pfam-A.hmm|PF08239.11 evalue:3.8e-07 score:29.5 best_domain_score:29.0 name:SH3_3;
sp YES;
tm_num 1;
21302 21403 signal_peptide
ID metaerg.pl|02055
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
21302 21952 transmembrane_helix
ID metaerg.pl|02056
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i21314-21382o;
22076 23005 CDS
ID metaerg.pl|02057
allgo_ids GO:0016020; GO:0016021; GO:0005886; GO:0006865;
allko_ids K15270;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE45502.1 9 306 evalue:3.8e-97 qcov:96.40 identity:62.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:6.7e-24 score:83.8 best_domain_score:57.3 name:EamA;
sprot_desc S-adenosylmethionine uptake transporter;
sprot_id sp|Q9ZE70|SAM_RICPR;
sprot_target db:uniprot_sprot|sp|Q9ZE70|SAM_RICPR 21 309 evalue:6.9e-21 qcov:93.50 identity:24.40;
tm_num 10;
22076 23005 transmembrane_helix
ID metaerg.pl|02058
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i22088-22156o22193-22261i22295-22363o22373-22432i22451-22510o22523-22591i22610-22678o22754-22822i22841-22909o22922-22975i;
23106 23414 CDS
ID metaerg.pl|02059
allgo_ids GO:0003677; GO:0005622; GO:0006355; GO:0005737; GO:0009295;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE45501.1 1 102 evalue:2.2e-33 qcov:100.00 identity:74.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00816;
pfam_desc H-NS histone family;
pfam_id Histone_HNS;
pfam_target db:Pfam-A.hmm|PF00816.21 evalue:1.5e-23 score:82.7 best_domain_score:82.5 name:Histone_HNS;
sprot_desc Trans-acting regulatory protein HvrA;
sprot_id sp|P42505|HVRA_RHOCA;
sprot_target db:uniprot_sprot|sp|P42505|HVRA_RHOCA 2 102 evalue:1.5e-20 qcov:99.00 identity:49.00;
23430 24329 CDS
ID metaerg.pl|02060
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06973.1 3 282 evalue:3.2e-77 qcov:93.60 identity:55.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF03631;
pfam_desc Virulence factor BrkB;
pfam_id Virul_fac_BrkB;
pfam_target db:Pfam-A.hmm|PF03631.15 evalue:7.6e-51 score:172.4 best_domain_score:172.2 name:Virul_fac_BrkB;
tigrfam_acc TIGR00765;
tigrfam_desc YihY family inner membrane protein;
tigrfam_mainrole Unknown function;
tigrfam_name yihY_not_rbn;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00765 evalue:3.3e-29 score:101.7 best_domain_score:101.4 name:TIGR00765;
tm_num 7;
23430 24329 transmembrane_helix
ID metaerg.pl|02061
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology o23496-23564i23694-23753o23811-23870i23889-23957o23967-24026i24060-24128o24171-24239i;
25183 24311 CDS
ID metaerg.pl|02062
allec_ids 3.4.11.18;
allgo_ids GO:0046872; GO:0070006; GO:0070084;
allko_ids K01265;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105319247.1 9 287 evalue:1.0e-128 qcov:96.20 identity:77.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00557;
pfam_desc Metallopeptidase family M24;
pfam_id Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF00557.24 evalue:1.2e-44 score:151.8 best_domain_score:151.5 name:Peptidase_M24;
sprot_desc Methionine aminopeptidase;
sprot_id sp|Q9ZCD3|MAP1_RICPR;
sprot_target db:uniprot_sprot|sp|Q9ZCD3|MAP1_RICPR 20 287 evalue:7.5e-78 qcov:92.40 identity:52.80;
tigrfam_acc TIGR00500;
tigrfam_desc methionine aminopeptidase, type I;
tigrfam_mainrole Protein fate;
tigrfam_name met_pdase_I;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00500 evalue:2.1e-80 score:269.0 best_domain_score:266.7 name:TIGR00500;
25301 26029 CDS
ID metaerg.pl|02063
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06975.1 1 240 evalue:2.1e-103 qcov:99.20 identity:79.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00994;
pfam_desc Probable molybdopterin binding domain;
pfam_id MoCF_biosynth;
pfam_target db:Pfam-A.hmm|PF00994.24 evalue:4.6e-30 score:103.4 best_domain_score:103.1 name:MoCF_biosynth;
26026 26823 CDS
ID metaerg.pl|02064
allgo_ids GO:0016747;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06976.1 7 254 evalue:3.9e-66 qcov:93.60 identity:60.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00583; PF13673; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.2e-10 score:40.9 best_domain_score:40.2 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:1.6e-06 score:27.3 best_domain_score:26.7 name:Acetyltransf_10; db:Pfam-A.hmm|PF08445.10 evalue:3.1e-06 score:26.3 best_domain_score:25.6 name:FR47;
26820 27389 CDS
ID metaerg.pl|02065
allgo_ids GO:0051920; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06977.1 1 189 evalue:2.9e-84 qcov:100.00 identity:84.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF02627;
pfam_desc Carboxymuconolactone decarboxylase family;
pfam_id CMD;
pfam_target db:Pfam-A.hmm|PF02627.20 evalue:6.9e-15 score:54.1 best_domain_score:40.4 name:CMD;
tigrfam_acc TIGR00778; TIGR01926;
tigrfam_desc alkylhydroperoxidase AhpD family core domain; uncharacterized peroxidase-related enzyme;
tigrfam_mainrole Unknown function;
tigrfam_name ahpD_dom; peroxid_rel;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00778 evalue:7.7e-11 score:40.5 best_domain_score:38.1 name:TIGR00778; db:TIGRFAMs.hmm|TIGR01926 evalue:1.7e-62 score:209.5 best_domain_score:209.4 name:TIGR01926;
28572 27400 CDS
ID metaerg.pl|02066
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109531543.1 1 390 evalue:3.0e-107 qcov:100.00 identity:52.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00534; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:1.8e-09 score:36.6 best_domain_score:36.1 name:Glycos_transf_1; db:Pfam-A.hmm|PF13692.6 evalue:6.7e-09 score:35.5 best_domain_score:34.9 name:Glyco_trans_1_4;
28708 29694 CDS
ID metaerg.pl|02067
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06982.1 13 326 evalue:1.0e-100 qcov:95.70 identity:58.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
sp YES;
tm_num 1;
28708 28779 signal_peptide
ID metaerg.pl|02068
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
28708 29694 transmembrane_helix
ID metaerg.pl|02069
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i28726-28794o;
29691 31442 CDS
ID metaerg.pl|02070
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06983.1 9 583 evalue:5.0e-199 qcov:98.60 identity:59.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
sp YES;
tm_num 1;
29691 29813 signal_peptide
ID metaerg.pl|02071
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
29691 31442 transmembrane_helix
ID metaerg.pl|02072
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i29709-29777o;
31442 32350 CDS
ID metaerg.pl|02073
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06984.1 31 302 evalue:6.3e-97 qcov:90.10 identity:67.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00535; PF13641;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:3.2e-13 score:49.1 best_domain_score:48.5 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:4.6e-08 score:32.5 best_domain_score:31.4 name:Glyco_tranf_2_3;
33543 32323 CDS
ID metaerg.pl|02074
allec_ids 2.4.-.-;
allgo_ids GO:0016757; GO:0009103; GO:0045228;
allko_ids K13657; K03844; K00688; K02844; K03429; K13668; K12996; K03857; K02840; K00703; K13003; K00749; K13677; K08256; K12989; K00712; K16703;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068299062.1 1 405 evalue:3.0e-142 qcov:99.80 identity:65.40;
kegg_pathway_id 01031; 00561; 00540; 01030; 00510; 00500;
kegg_pathway_name Glycan structures - biosynthesis 2; Glycerolipid metabolism; Lipopolysaccharide biosynthesis; Glycan structures - biosynthesis 1; N-Glycan biosynthesis; Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id LPSSYN-PWY; LIPA-CORESYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF00534; PF13524; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyl transferases group 1; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_trans_1_2; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:7.2e-30 score:103.0 best_domain_score:102.5 name:Glycos_transf_1; db:Pfam-A.hmm|PF13524.6 evalue:2.1e-07 score:30.5 best_domain_score:29.0 name:Glyco_trans_1_2; db:Pfam-A.hmm|PF13692.6 evalue:1.4e-31 score:109.0 best_domain_score:108.0 name:Glyco_trans_1_4;
sprot_desc Putative colanic acid biosynthesis glycosyltransferase WcaL;
sprot_id sp|P26388|WCAL_SALTY;
sprot_target db:uniprot_sprot|sp|P26388|WCAL_SALTY 1 390 evalue:1.5e-20 qcov:96.10 identity:26.70;
33642 35099 CDS
ID metaerg.pl|02075
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06986.1 48 485 evalue:5.3e-122 qcov:90.30 identity:55.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01943; PF13440;
pfam_desc Polysaccharide biosynthesis protein; Polysaccharide biosynthesis protein;
pfam_id Polysacc_synt; Polysacc_synt_3;
pfam_target db:Pfam-A.hmm|PF01943.17 evalue:6.5e-23 score:80.7 best_domain_score:79.5 name:Polysacc_synt; db:Pfam-A.hmm|PF13440.6 evalue:1.4e-46 score:158.3 best_domain_score:158.3 name:Polysacc_synt_3;
tm_num 12;
33642 35099 transmembrane_helix
ID metaerg.pl|02076
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology o33888-33956i34017-34085o34113-34181i34218-34286o34296-34364i34401-34469o34512-34580i34653-34721o34749-34817i34854-34922o34935-34994i35028-35087o;
35228 36157 CDS
ID metaerg.pl|02077
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28337.1 1 309 evalue:2.8e-52 qcov:100.00 identity:42.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
36176 37477 CDS
ID metaerg.pl|02078
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28338.1 1 424 evalue:1.0e-87 qcov:97.90 identity:46.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
sp YES;
tm_num 3;
36176 36307 signal_peptide
ID metaerg.pl|02079
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
36176 37477 transmembrane_helix
ID metaerg.pl|02080
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology o36233-36286i37229-37297o37403-37471i;
37577 38647 CDS
ID metaerg.pl|02081
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter_A;s__Pseudorhodobacter_A sp001828855;
genomedb_acc GCA_001828855.1;
genomedb_target db:genomedb|GCA_001828855.1|OHC59684.1 19 349 evalue:4.2e-100 qcov:93.00 identity:60.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00535; PF13641;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.9e-13 score:49.8 best_domain_score:47.8 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:6.9e-07 score:28.6 best_domain_score:27.4 name:Glyco_tranf_2_3;
tm_num 2;
37577 38647 transmembrane_helix
ID metaerg.pl|02082
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i38324-38392o38402-38461i;
38652 40793 CDS
ID metaerg.pl|02083
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114;
allko_ids K00356; K13016; K03953; K00035; K00329;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797321.1 1 713 evalue:7.1e-256 qcov:100.00 identity:64.40;
kegg_pathway_id 00052; 00130; 05012; 00190;
kegg_pathway_name Galactose metabolism; Ubiquinone biosynthesis; Parkinson's disease; Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01073; PF01370; PF16363; PF01408; PF13460; PF07993; PF05368; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; Oxidoreductase family, NAD-binding Rossmann fold; NAD(P)H-binding ; Male sterility protein; NmrA-like family; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; GFO_IDH_MocA; NAD_binding_10; NAD_binding_4; NmrA; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:1.3e-14 score:53.1 best_domain_score:52.6 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:2.7e-31 score:108.1 best_domain_score:107.5 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:2.5e-11 score:42.8 best_domain_score:40.9 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF01408.22 evalue:3.9e-26 score:91.5 best_domain_score:89.1 name:GFO_IDH_MocA; db:Pfam-A.hmm|PF13460.6 evalue:2.9e-17 score:62.4 best_domain_score:61.7 name:NAD_binding_10; db:Pfam-A.hmm|PF07993.12 evalue:7.6e-10 score:37.6 best_domain_score:21.9 name:NAD_binding_4; db:Pfam-A.hmm|PF05368.13 evalue:4.2e-13 score:48.6 best_domain_score:48.0 name:NmrA; db:Pfam-A.hmm|PF04321.17 evalue:6.7e-05 score:21.3 best_domain_score:20.6 name:RmlD_sub_bind;
41572 40787 CDS
ID metaerg.pl|02084
allec_ids 2.4.1.180; 2.4.1.-;
allgo_ids GO:0009058; GO:0047241; GO:0009246;
allko_ids K02852;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068298985.1 1 248 evalue:1.6e-88 qcov:95.00 identity:71.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-5759; PWY-5286; PWY-5398; PWY-5339; PWY-5926; PWY-5774; PWY-5797; PWY-2021; PWY-5672; PWY-6397; PWY-4421; PWY-5666; PWY-5800; PWY-5161; PWY-5139; PWY-5756; PWY-5160; PWY-5284; PWY-5272; ECASYN-PWY; PWY-5379; PWY-83; PWY-5784; PWY-5268; PWY-881; PWY-5313; PWY-5793; PWY-5380; PWY-5397; PWY-2901; PWY-6404; PWY-5400; PWY-5338; PWY-6297; PWY-2881; PWY-5343; PWY-5399; PWY-5405; PWY-5342; PWY-5307;
metacyc_pathway_name saponin biosynthesis III;; anthocyanidin sophoroside metabolism;; crocetin esters biosynthesis;; chalcone 2'-O-glucoside biosynthesis;; afrormosin conjugates interconversion;; saponin biosynthesis IV;; indole-3-acetate inactivation VI;; indole-3-acetate inactivation IV;; ginsenosides biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; curcumin glucoside biosynthesis;; α-solanine/α-chaconine biosynthesis;; xylan biosynthesis;; 6'-deoxychalcone metabolism;; pelargonidin conjugates biosynthesis;; saponin biosynthesis II;; rose anthocyanin biosynthesis I (via cyanidin 5-O-β-D-glucoside);; shisonin biosynthesis;; abscisic acid degradation by glucosylation;; enterobacterial common antigen biosynthesis;; B series fagopyritols biosynthesis;; monolignol glucosides biosynthesis;; indole-3-acetate inactivation VIII;; salvianin biosynthesis;; trehalose biosynthesis II;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; maysin biosynthesis;; A series fagopyritols biosynthesis;; crocetin biosynthesis;; cytokinins 9-N-glucoside biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; amaranthin biosynthesis;; galactosylcyclitol biosynthesis;; tuberonate glucoside biosynthesis;; cytokinins 7-N-glucoside biosynthesis;; ajugose biosynthesis II (galactinol-independent);; betacyanin biosynthesis;; superpathway of betalain biosynthesis;; ajugose biosynthesis I (galactinol-dependent);; gentiodelphin biosynthesis;;
metacyc_pathway_type TRITERPENOID-SYN;; ANTHOCYANIN-SYN; Metabolic-Clusters;; APOCAROTENOID-SYN;; CHALCONE-SYN;; ISOFLAVONOID-SYN; Interconversion;; TRITERPENOID-SYN;; Indole-3-Acetate-Inactivation;; Indole-3-Acetate-Inactivation;; TRITERPENOID-SYN;; Cell-Wall-Biosynthesis;; PHENYLPROPANOID-SYN; POLYKETIDE-SYN;; ALKALOIDS-SYN;; SECONDARY-CELL-WALL;; CHALCONE-SYN;; ANTHOCYANIN-SYN;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN;; ANTHOCYANIN-SYN;; Abscisic-Acid-Degradation; Interconversion;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; CYCLITOLS-DEG; SUGAR-DERIVS;; LIGNIN-SYN; Metabolic-Clusters;; Indole-3-Acetate-Inactivation;; ANTHOCYANIN-SYN;; Trehalose-biosynthesis;; ANTHOCYANIN-SYN; Super-Pathways;; FLAVONE-SYN;; CYCLITOLS-DEG; SUGAR-DERIVS;; APOCAROTENOID-SYN;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Cell-Wall-Biosynthesis; Super-Pathways;; BETALAIN-ALKALOIDS;; Cyclitols-Biosynthesis;; Inactivation;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; BETALAIN-ALKALOIDS;; BETALAIN-ALKALOIDS; Super-Pathways;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; ANTHOCYANIN-SYN;;
pfam_acc PF03808;
pfam_desc Glycosyl transferase WecB/TagA/CpsF family;
pfam_id Glyco_tran_WecB;
pfam_target db:Pfam-A.hmm|PF03808.13 evalue:3.3e-42 score:143.5 best_domain_score:143.1 name:Glyco_tran_WecB;
sprot_desc UDP-N-acetyl-D-mannosaminuronic acid transferase;
sprot_id sp|B5FN88|WECG_SALDC;
sprot_target db:uniprot_sprot|sp|B5FN88|WECG_SALDC 36 232 evalue:1.1e-11 qcov:75.50 identity:31.20;
tigrfam_acc TIGR00696;
tigrfam_desc glycosyltransferase, WecB/TagA/CpsF family;
tigrfam_mainrole Cell envelope;
tigrfam_name wecG_tagA_cpsF;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00696 evalue:3.3e-28 score:97.7 best_domain_score:97.3 name:TIGR00696;
41794 43362 CDS
ID metaerg.pl|02085
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06992.1 4 490 evalue:1.1e-146 qcov:93.30 identity:55.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
tm_num 10;
41794 43362 transmembrane_helix
ID metaerg.pl|02086
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i41812-41880o41890-41958i41977-42036o42049-42117i42307-42375o42475-42543i42562-42630o42673-42741i42961-43029o43102-43170i;
43463 49882 CDS
ID metaerg.pl|02087
allgo_ids GO:0009058; GO:0016788;
allko_ids K02364; K00992; K01779; K01776; K03367; K00143; K01652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06993.1 19 2116 evalue:0.0e+00 qcov:98.10 identity:69.40;
kegg_pathway_id 01053; 00770; 00290; 00310; 00300; 00650; 00660; 00471; 00252; 00251; 00473;
kegg_pathway_name Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine biosynthesis; Lysine degradation; Lysine biosynthesis; Butanoate metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Alanine and aspartate metabolism; Glutamate metabolism; D-Alanine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00698; PF00106; PF16197; PF00109; PF02801; PF08659; PF00550; PF14765; PF00975;
pfam_desc Acyl transferase domain; short chain dehydrogenase; Ketoacyl-synthetase C-terminal extension; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; KR domain; Phosphopantetheine attachment site; Polyketide synthase dehydratase; Thioesterase domain;
pfam_id Acyl_transf_1; adh_short; KAsynt_C_assoc; ketoacyl-synt; Ketoacyl-synt_C; KR; PP-binding; PS-DH; Thioesterase;
pfam_target db:Pfam-A.hmm|PF00698.21 evalue:3.9e-44 score:150.7 best_domain_score:150.1 name:Acyl_transf_1; db:Pfam-A.hmm|PF00106.25 evalue:1.5e-10 score:40.1 best_domain_score:33.8 name:adh_short; db:Pfam-A.hmm|PF16197.5 evalue:7.1e-17 score:61.1 best_domain_score:59.0 name:KAsynt_C_assoc; db:Pfam-A.hmm|PF00109.26 evalue:8.2e-67 score:224.7 best_domain_score:223.7 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:3.4e-40 score:136.0 best_domain_score:134.8 name:Ketoacyl-synt_C; db:Pfam-A.hmm|PF08659.10 evalue:3.2e-47 score:160.0 best_domain_score:158.0 name:KR; db:Pfam-A.hmm|PF00550.25 evalue:2e-14 score:52.9 best_domain_score:51.1 name:PP-binding; db:Pfam-A.hmm|PF14765.6 evalue:1e-39 score:135.8 best_domain_score:134.4 name:PS-DH; db:Pfam-A.hmm|PF00975.20 evalue:7.1e-19 score:68.1 best_domain_score:64.3 name:Thioesterase;
49879 50826 CDS
ID metaerg.pl|02088
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE45479.1 2 315 evalue:3.4e-117 qcov:99.70 identity:69.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00535; PF13641;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:3.8e-12 score:45.6 best_domain_score:44.9 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:5.3e-11 score:42.1 best_domain_score:41.3 name:Glyco_tranf_2_3;
50828 55447 CDS
ID metaerg.pl|02089
allec_ids 1.-.-.-;
allgo_ids GO:0003824;
allko_ids K01652; K01897; K01895; K01904; K01909; K01586; K05939; K01912; K00992; K02364; K01779; K01776; K03367; K00143;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06995.1 1 1539 evalue:0.0e+00 qcov:100.00 identity:63.60;
kegg_pathway_id 00620; 00300; 00640; 00650; 00720; 00940; 00252; 00251; 00473; 00360; 00071; 00660; 00471; 00290; 00564; 00010; 00310; 00770; 01053;
kegg_pathway_name Pyruvate metabolism; Lysine biosynthesis; Propanoate metabolism; Butanoate metabolism; Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis; Alanine and aspartate metabolism; Glutamate metabolism; D-Alanine metabolism; Phenylalanine metabolism; Fatty acid metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Valine, leucine and isoleucine biosynthesis; Glycerophospholipid metabolism; Glycolysis / Gluconeogenesis; Lysine degradation; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-5469; PWY-5479; PWY-5987; PWY-6113; PWYG-321; PWY-4302; PWY-5271; PWY-2821; PWY-5826;
metacyc_pathway_name sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;;
metacyc_pathway_type LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;;
pfam_acc PF00501; PF13193; PF00296; PF02911; PF00551; PF00550;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain; Luciferase-like monooxygenase; Formyl transferase, C-terminal domain; Formyl transferase; Phosphopantetheine attachment site;
pfam_id AMP-binding; AMP-binding_C; Bac_luciferase; Formyl_trans_C; Formyl_trans_N; PP-binding;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:7.9e-102 score:340.2 best_domain_score:186.0 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:3.5e-10 score:40.0 best_domain_score:39.4 name:AMP-binding_C; db:Pfam-A.hmm|PF00296.20 evalue:5.2e-43 score:146.9 best_domain_score:146.1 name:Bac_luciferase; db:Pfam-A.hmm|PF02911.18 evalue:4.7e-07 score:29.2 best_domain_score:26.5 name:Formyl_trans_C; db:Pfam-A.hmm|PF00551.19 evalue:3e-13 score:49.1 best_domain_score:48.1 name:Formyl_trans_N; db:Pfam-A.hmm|PF00550.25 evalue:3.8e-10 score:39.2 best_domain_score:37.3 name:PP-binding;
tigrfam_acc TIGR01733; TIGR04020;
tigrfam_desc amino acid adenylation domain; natural product biosynthesis luciferase-like monooxygenase domain;
tigrfam_name AA-adenyl-dom; seco_metab_LLM;
tigrfam_target db:TIGRFAMs.hmm|TIGR01733 evalue:1.1e-125 score:418.8 best_domain_score:215.9 name:TIGR01733; db:TIGRFAMs.hmm|TIGR04020 evalue:6.2e-141 score:468.6 best_domain_score:468.1 name:TIGR04020;
55454 56179 CDS
ID metaerg.pl|02090
allec_ids 2.7.8.7;
allgo_ids GO:0000287; GO:0008897; GO:0009366; GO:0009239;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria_E;s__Ruegeria_E mediterranea;
genomedb_acc GCF_900302455.1;
genomedb_target db:genomedb|GCF_900302455.1|WP_108786392.1 16 226 evalue:2.5e-32 qcov:87.60 identity:36.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-6012;
metacyc_pathway_name acyl carrier protein metabolism;;
metacyc_pathway_type Cofactor-Biosynthesis; Interconversion;;
pfam_acc PF17837; PF01648;
pfam_desc 4'-phosphopantetheinyl transferase N-terminal domain; 4'-phosphopantetheinyl transferase superfamily;
pfam_id 4PPT_N; ACPS;
pfam_target db:Pfam-A.hmm|PF17837.1 evalue:1.7e-22 score:78.5 best_domain_score:77.9 name:4PPT_N; db:Pfam-A.hmm|PF01648.20 evalue:6.2e-09 score:35.2 best_domain_score:34.2 name:ACPS;
sprot_desc 4'-phosphopantetheinyl transferase Svp;
sprot_id sp|Q9F0Q6|PPTA_STRMB;
sprot_target db:uniprot_sprot|sp|Q9F0Q6|PPTA_STRMB 44 226 evalue:5.2e-24 qcov:75.90 identity:34.60;
57177 56146 CDS
ID metaerg.pl|02091
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_D;s__Rhodobacter_D veldkampii;
genomedb_acc GCF_003034995.1;
genomedb_target db:genomedb|GCF_003034995.1|WP_107325047.1 1 340 evalue:2.1e-112 qcov:99.10 identity:59.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF03486;
pfam_desc HI0933-like protein;
pfam_id HI0933_like;
pfam_target db:Pfam-A.hmm|PF03486.14 evalue:2.4e-67 score:226.7 best_domain_score:226.5 name:HI0933_like;
tigrfam_acc TIGR00275; TIGR03862;
tigrfam_desc flavoprotein, HI0933 family; flavoprotein, TIGR03862 family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00275; flavo_PP4765;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00275 evalue:1.9e-56 score:190.8 best_domain_score:190.3 name:TIGR00275; db:TIGRFAMs.hmm|TIGR03862 evalue:1.4e-123 score:411.7 best_domain_score:411.5 name:TIGR03862;
58040 57327 CDS
ID metaerg.pl|02092
allec_ids 2.7.7.7;
allgo_ids GO:0003677; GO:0003887; GO:0004527; GO:0046872; GO:0006260;
allko_ids K02337; K02342;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:7.9e-41 score:139.1 best_domain_score:138.7 name:DEDDh;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06998.1 1 230 evalue:5.9e-74 qcov:97.00 identity:57.80;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF16473; PF00929;
pfam_desc 3' exoribonuclease, RNase T-like; Exonuclease;
pfam_id DUF5051; RNase_T;
pfam_target db:Pfam-A.hmm|PF16473.5 evalue:6.4e-07 score:28.7 best_domain_score:28.0 name:DUF5051; db:Pfam-A.hmm|PF00929.24 evalue:2.5e-36 score:124.9 best_domain_score:124.6 name:RNase_T;
sprot_desc DNA polymerase III subunit epsilon;
sprot_id sp|Q9ZCJ9|DPO3E_RICPR;
sprot_target db:uniprot_sprot|sp|Q9ZCJ9|DPO3E_RICPR 1 220 evalue:6.8e-53 qcov:92.80 identity:48.90;
tigrfam_acc TIGR00573; TIGR01406;
tigrfam_desc exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit;
tigrfam_mainrole DNA metabolism; DNA metabolism;
tigrfam_name dnaq; dnaQ_proteo;
tigrfam_sub1role Degradation of DNA; DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00573 evalue:1.2e-45 score:154.8 best_domain_score:154.4 name:TIGR00573; db:TIGRFAMs.hmm|TIGR01406 evalue:1.7e-81 score:272.3 best_domain_score:272.2 name:TIGR01406;
58642 58040 CDS
ID metaerg.pl|02093
allec_ids 2.7.1.24;
allgo_ids GO:0004140; GO:0005524; GO:0015937; GO:0005737;
allko_ids K00859;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06999.1 1 194 evalue:8.0e-56 qcov:97.00 identity:57.70;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PANTOSYN-PWY; PWY-4242; PWY-4221; COA-PWY;
metacyc_pathway_name superpathway of coenzyme A biosynthesis I (bacteria);; ; superpathway of coenzyme A biosynthesis II (plants);; coenzyme A biosynthesis I (prokaryotic);;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; ; CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis;;
pfam_acc PF01121;
pfam_desc Dephospho-CoA kinase;
pfam_id CoaE;
pfam_target db:Pfam-A.hmm|PF01121.20 evalue:4.6e-41 score:139.7 best_domain_score:139.5 name:CoaE;
sprot_desc Dephospho-CoA kinase;
sprot_id sp|Q3IYG8|COAE_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IYG8|COAE_RHOS4 3 190 evalue:1.7e-49 qcov:94.00 identity:55.90;
tigrfam_acc TIGR00152;
tigrfam_desc dephospho-CoA kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00152;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00152 evalue:8.8e-36 score:122.7 best_domain_score:122.4 name:TIGR00152;
59451 58639 CDS
ID metaerg.pl|02094
allec_ids 1.1.1.25;
allgo_ids GO:0004764; GO:0055114; GO:0050661; GO:0009073; GO:0009423; GO:0019632;
allko_ids K13832; K00891; K00014;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Jannaschia;s__Jannaschia seosinensis;
genomedb_acc GCF_001408515.1;
genomedb_target db:genomedb|GCF_001408515.1|WP_055663603.1 2 269 evalue:1.1e-71 qcov:99.30 identity:52.40;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; PWY-6163; PWY-6165; ARO-PWY;
metacyc_pathway_name superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; chorismate biosynthesis from 3-dehydroquinate;; chorismate biosynthesis II (archaea);; chorismate biosynthesis I;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; Chorismate-Biosynthesis;; Chorismate-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;;
pfam_acc PF03807; PF18317; PF01488; PF08501;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; Shikimate 5'-dehydrogenase C-terminal domain; Shikimate / quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain;
pfam_id F420_oxidored; SDH_C; Shikimate_DH; Shikimate_dh_N;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:9.3e-05 score:22.2 best_domain_score:21.4 name:F420_oxidored; db:Pfam-A.hmm|PF18317.1 evalue:2.1e-07 score:29.9 best_domain_score:28.5 name:SDH_C; db:Pfam-A.hmm|PF01488.20 evalue:1e-10 score:41.1 best_domain_score:40.4 name:Shikimate_DH; db:Pfam-A.hmm|PF08501.11 evalue:1e-21 score:76.2 best_domain_score:75.3 name:Shikimate_dh_N;
sprot_desc Shikimate dehydrogenase (NADP(+));
sprot_id sp|A8LPB8|AROE_DINSH;
sprot_target db:uniprot_sprot|sp|A8LPB8|AROE_DINSH 3 269 evalue:2.8e-66 qcov:98.90 identity:48.90;
tigrfam_acc TIGR00507;
tigrfam_desc shikimate dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name aroE;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00507 evalue:3.5e-67 score:225.6 best_domain_score:225.4 name:TIGR00507;
60080 61351 CDS
ID metaerg.pl|02095
allec_ids 3.6.4.-;
allgo_ids GO:0005524; GO:0004386; GO:0003723; GO:0008186; GO:0006353;
allko_ids K03628;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE45471.1 1 423 evalue:5.9e-210 qcov:100.00 identity:88.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00006; PF07498; PF07497;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain;
pfam_id ATP-synt_ab; Rho_N; Rho_RNA_bind;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:5.1e-24 score:84.3 best_domain_score:83.8 name:ATP-synt_ab; db:Pfam-A.hmm|PF07498.12 evalue:2.2e-15 score:55.6 best_domain_score:54.0 name:Rho_N; db:Pfam-A.hmm|PF07497.12 evalue:3.3e-28 score:96.6 best_domain_score:95.7 name:Rho_RNA_bind;
sprot_desc Transcription termination factor Rho;
sprot_id sp|P52156|RHO_RHOS4;
sprot_target db:uniprot_sprot|sp|P52156|RHO_RHOS4 6 423 evalue:6.6e-208 qcov:98.80 identity:87.60;
tigrfam_acc TIGR00767;
tigrfam_desc transcription termination factor Rho;
tigrfam_mainrole Transcription;
tigrfam_name rho;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00767 evalue:1.7e-206 score:685.1 best_domain_score:684.9 name:TIGR00767;
61417 62646 CDS
ID metaerg.pl|02096
allec_ids 3.6.-.-;
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0046872; GO:0006400;
allko_ids K03650;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28351.1 1 409 evalue:5.3e-115 qcov:100.00 identity:52.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF04548; PF00350; PF02421; PF01926; PF12631; PF10396;
pfam_desc AIG1 family; Dynamin family; Ferrous iron transport protein B; 50S ribosome-binding GTPase; MnmE helical domain; GTP-binding protein TrmE N-terminus;
pfam_id AIG1; Dynamin_N; FeoB_N; MMR_HSR1; MnmE_helical; TrmE_N;
pfam_target db:Pfam-A.hmm|PF04548.16 evalue:1.1e-06 score:27.4 best_domain_score:22.0 name:AIG1; db:Pfam-A.hmm|PF00350.23 evalue:1e-07 score:31.4 best_domain_score:30.5 name:Dynamin_N; db:Pfam-A.hmm|PF02421.18 evalue:4.2e-07 score:28.9 best_domain_score:28.2 name:FeoB_N; db:Pfam-A.hmm|PF01926.23 evalue:1.3e-19 score:69.6 best_domain_score:68.3 name:MMR_HSR1; db:Pfam-A.hmm|PF12631.7 evalue:4.9e-46 score:156.7 best_domain_score:156.4 name:MnmE_helical; db:Pfam-A.hmm|PF10396.9 evalue:1.3e-28 score:98.9 best_domain_score:97.4 name:TrmE_N;
sprot_desc tRNA modification GTPase MnmE;
sprot_id sp|A3PNS7|MNME_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PNS7|MNME_RHOS1 1 409 evalue:2.5e-95 qcov:100.00 identity:47.70;
tigrfam_acc TIGR00231; TIGR00450;
tigrfam_desc small GTP-binding protein domain; tRNA modification GTPase TrmE;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; mnmE_trmE_thdF;
tigrfam_sub1role General; tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:1.6e-20 score:72.7 best_domain_score:71.3 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00450 evalue:1.8e-78 score:263.7 best_domain_score:260.8 name:TIGR00450;
62657 64552 CDS
ID metaerg.pl|02097
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0050660; GO:0002098;
allko_ids K03495;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Albidovulum_A;s__Albidovulum_A xiamenense;
genomedb_acc GCF_900102905.1;
genomedb_target db:genomedb|GCF_900102905.1|WP_092498278.1 2 617 evalue:8.0e-195 qcov:97.60 identity:57.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00890; PF12831; PF01134; PF13932; PF07992;
pfam_desc FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; GidA associated domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id FAD_binding_2; FAD_oxidored; GIDA; GIDA_assoc; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:2.3e-06 score:26.2 best_domain_score:24.9 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:3.5e-08 score:32.5 best_domain_score:31.7 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:1.9e-151 score:503.9 best_domain_score:503.4 name:GIDA; db:Pfam-A.hmm|PF13932.6 evalue:1e-62 score:211.3 best_domain_score:210.6 name:GIDA_assoc; db:Pfam-A.hmm|PF07992.14 evalue:5.2e-07 score:28.4 best_domain_score:26.6 name:Pyr_redox_2;
sprot_desc tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;
sprot_id sp|A4WVY9|MNMG_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WVY9|MNMG_RHOS5 1 621 evalue:4.3e-195 qcov:98.40 identity:56.50;
tigrfam_acc TIGR00136;
tigrfam_desc tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA;
tigrfam_mainrole Protein synthesis;
tigrfam_name gidA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00136 evalue:6.7e-232 score:770.3 best_domain_score:770.1 name:TIGR00136;
64506 65141 CDS
ID metaerg.pl|02098
allec_ids 2.1.1.170;
allgo_ids GO:0005737; GO:0006364; GO:0008649; GO:0070043;
allko_ids K03501;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Defluviimonas_A;s__Defluviimonas_A indica;
genomedb_acc GCF_900106675.1;
genomedb_target db:genomedb|GCF_900106675.1|WP_035842707.1 13 208 evalue:5.1e-53 qcov:92.90 identity:57.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF02527;
pfam_desc rRNA small subunit methyltransferase G;
pfam_id GidB;
pfam_target db:Pfam-A.hmm|PF02527.15 evalue:6.2e-38 score:129.2 best_domain_score:128.9 name:GidB;
sprot_desc Ribosomal RNA small subunit methyltransferase G;
sprot_id sp|Q16CZ7|RSMG_ROSDO;
sprot_target db:uniprot_sprot|sp|Q16CZ7|RSMG_ROSDO 17 209 evalue:3.7e-42 qcov:91.50 identity:47.20;
tigrfam_acc TIGR00138;
tigrfam_desc 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;
tigrfam_mainrole Protein synthesis;
tigrfam_name rsmG_gidB;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00138 evalue:1e-35 score:122.2 best_domain_score:121.9 name:TIGR00138;
65151 65945 CDS
ID metaerg.pl|02099
allec_ids 3.6.-.-;
allgo_ids GO:0005524; GO:0016491; GO:0055114; GO:0016787; GO:0030435;
allko_ids K03496;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28354.1 1 260 evalue:1.4e-92 qcov:98.50 identity:68.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF13614; PF02374; PF01656; PF06564; PF00142; PF09140; PF10609; PF07015;
pfam_desc AAA domain; Anion-transporting ATPase; CobQ/CobB/MinD/ParA nucleotide binding domain; Cellulose biosynthesis protein BcsQ; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; ATPase MipZ; NUBPL iron-transfer P-loop NTPase; VirC1 protein;
pfam_id AAA_31; ArsA_ATPase; CbiA; CBP_BcsQ; Fer4_NifH; MipZ; ParA; VirC1;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:6.5e-59 score:198.0 best_domain_score:196.3 name:AAA_31; db:Pfam-A.hmm|PF02374.15 evalue:3.9e-06 score:25.5 best_domain_score:25.0 name:ArsA_ATPase; db:Pfam-A.hmm|PF01656.23 evalue:2.7e-27 score:94.6 best_domain_score:94.0 name:CbiA; db:Pfam-A.hmm|PF06564.12 evalue:1.9e-10 score:39.9 best_domain_score:38.8 name:CBP_BcsQ; db:Pfam-A.hmm|PF00142.18 evalue:3.2e-11 score:42.4 best_domain_score:26.3 name:Fer4_NifH; db:Pfam-A.hmm|PF09140.11 evalue:1.7e-10 score:39.8 best_domain_score:33.4 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:5e-10 score:38.5 best_domain_score:35.1 name:ParA; db:Pfam-A.hmm|PF07015.11 evalue:9.5e-06 score:24.3 best_domain_score:21.6 name:VirC1;
sprot_desc Sporulation initiation inhibitor protein Soj;
sprot_id sp|Q9K5N0|SOJ_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K5N0|SOJ_BACHD 2 254 evalue:3.0e-65 qcov:95.80 identity:53.00;
65942 66844 CDS
ID metaerg.pl|02100
allgo_ids GO:0003677; GO:0007059;
allko_ids K03497;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07008.1 1 298 evalue:2.0e-87 qcov:99.30 identity:58.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF17762; PF02195;
pfam_desc HTH domain found in ParB protein; ParB-like nuclease domain;
pfam_id HTH_ParB; ParBc;
pfam_target db:Pfam-A.hmm|PF17762.1 evalue:8.9e-14 score:50.3 best_domain_score:48.8 name:HTH_ParB; db:Pfam-A.hmm|PF02195.18 evalue:1.9e-26 score:91.4 best_domain_score:90.4 name:ParBc;
sprot_desc Chromosome-partitioning protein ParB;
sprot_id sp|P0CAV8|PARB_CAUVC;
sprot_target db:uniprot_sprot|sp|P0CAV8|PARB_CAUVC 6 298 evalue:2.6e-73 qcov:97.70 identity:51.70;
tigrfam_acc TIGR00180;
tigrfam_desc ParB/RepB/Spo0J family partition protein;
tigrfam_name parB_part;
tigrfam_target db:TIGRFAMs.hmm|TIGR00180 evalue:6.7e-59 score:197.9 best_domain_score:197.3 name:TIGR00180;
68084 66885 CDS
ID metaerg.pl|02101
allec_ids 1.3.99.22;
allgo_ids GO:0003824; GO:0051536; GO:0005739; GO:0051539; GO:0004109; GO:0046872; GO:0006779;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_A;s__Rhodobacter_A ovatus;
genomedb_acc GCF_900207575.1;
genomedb_target db:genomedb|GCF_900207575.1|WP_097030055.1 18 399 evalue:3.1e-128 qcov:95.70 identity:57.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY0-1415; HEMESYN2-PWY;
metacyc_pathway_name superpathway of heme b biosynthesis from uroporphyrinogen-III;; heme b biosynthesis II (anaerobic);;
metacyc_pathway_type Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis;;
pfam_acc PF06969; PF04055;
pfam_desc HemN C-terminal domain; Radical SAM superfamily;
pfam_id HemN_C; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF06969.16 evalue:3.9e-09 score:35.7 best_domain_score:34.3 name:HemN_C; db:Pfam-A.hmm|PF04055.21 evalue:4.1e-16 score:59.0 best_domain_score:58.4 name:Radical_SAM;
sprot_desc Radical S-adenosyl methionine domain-containing protein 1, mitochondrial;
sprot_id sp|Q9HA92|RSAD1_HUMAN;
sprot_target db:uniprot_sprot|sp|Q9HA92|RSAD1_HUMAN 10 395 evalue:4.2e-71 qcov:96.70 identity:39.00;
tigrfam_acc TIGR00539;
tigrfam_desc putative oxygen-independent coproporphyrinogen III oxidase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemN_rel;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00539 evalue:5.8e-83 score:278.1 best_domain_score:277.8 name:TIGR00539;
68695 68060 CDS
ID metaerg.pl|02102
allec_ids 3.6.1.66; 3.6.1.-;
allgo_ids GO:0009143; GO:0047429; GO:0046872; GO:0017111; GO:0000166; GO:0009117; GO:0009146;
allko_ids K01516; K02428;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius mucosus_A;
genomedb_acc GCF_002080415.1;
genomedb_target db:genomedb|GCF_002080415.1|WP_008282744.1 8 203 evalue:2.1e-75 qcov:92.90 identity:73.00;
kegg_pathway_id 00240; 00730; 00230;
kegg_pathway_name Pyrimidine metabolism; Thiamine metabolism; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-6502; PWY-6147; PWY-6383; FOLSYN-PWY; ALL-CHORISMATE-PWY; PWY-6404; PWY-5354;
metacyc_pathway_name oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ;
metacyc_pathway_type Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;; Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; ;
pfam_acc PF01725;
pfam_desc Ham1 family;
pfam_id Ham1p_like;
pfam_target db:Pfam-A.hmm|PF01725.16 evalue:1.5e-58 score:197.0 best_domain_score:196.9 name:Ham1p_like;
sprot_desc dITP/XTP pyrophosphatase;
sprot_id sp|Q5LWF7|IXTPA_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LWF7|IXTPA_RUEPO 3 203 evalue:3.8e-71 qcov:95.30 identity:68.70;
tigrfam_acc TIGR00042;
tigrfam_desc non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family;
tigrfam_mainrole DNA metabolism;
tigrfam_name TIGR00042;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00042 evalue:6.6e-43 score:145.4 best_domain_score:144.9 name:TIGR00042;
69420 68695 CDS
ID metaerg.pl|02103
allec_ids 2.7.7.56;
allgo_ids GO:0000175; GO:0000049; GO:0009022; GO:0016075; GO:0006364; GO:0008033;
allko_ids K01516; K00962; K00989;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07011.1 1 236 evalue:1.0e-97 qcov:97.90 identity:77.50;
kegg_pathway_id 00240; 00730; 00230;
kegg_pathway_name Pyrimidine metabolism; Thiamine metabolism; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY0-1479;
metacyc_pathway_name tRNA processing;;
metacyc_pathway_type Nucleic-Acid-Processing;;
pfam_acc PF01138; PF03725;
pfam_desc 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2;
pfam_id RNase_PH; RNase_PH_C;
pfam_target db:Pfam-A.hmm|PF01138.21 evalue:1.5e-23 score:83.0 best_domain_score:82.3 name:RNase_PH; db:Pfam-A.hmm|PF03725.15 evalue:3.4e-08 score:32.6 best_domain_score:32.1 name:RNase_PH_C;
sprot_desc Ribonuclease PH;
sprot_id sp|A3PNR8|RNPH_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PNR8|RNPH_RHOS1 1 236 evalue:1.9e-95 qcov:97.90 identity:73.30;
tigrfam_acc TIGR01966;
tigrfam_desc ribonuclease PH;
tigrfam_mainrole Transcription;
tigrfam_name RNasePH;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR01966 evalue:9.6e-101 score:335.1 best_domain_score:334.9 name:TIGR01966;
69518 70585 CDS
ID metaerg.pl|02104
allgo_ids GO:0003677; GO:0006355; GO:0045892;
allko_ids K03705;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07012.1 1 355 evalue:1.5e-153 qcov:100.00 identity:80.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01628;
pfam_desc HrcA protein C terminal domain;
pfam_id HrcA;
pfam_target db:Pfam-A.hmm|PF01628.21 evalue:2.9e-53 score:180.3 best_domain_score:179.7 name:HrcA;
sprot_desc Heat-inducible transcription repressor HrcA;
sprot_id sp|B9J7U0|HRCA_AGRRK;
sprot_target db:uniprot_sprot|sp|B9J7U0|HRCA_AGRRK 8 348 evalue:7.5e-96 qcov:96.10 identity:54.80;
tigrfam_acc TIGR00331;
tigrfam_desc heat-inducible transcription repressor HrcA;
tigrfam_mainrole Regulatory functions;
tigrfam_name hrcA;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00331 evalue:1.3e-86 score:290.4 best_domain_score:290.2 name:TIGR00331;
70598 71221 CDS
ID metaerg.pl|02105
allgo_ids GO:0000774; GO:0006457; GO:0042803; GO:0051087;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07013.1 18 202 evalue:2.7e-59 qcov:89.40 identity:68.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01025;
pfam_desc GrpE;
pfam_id GrpE;
pfam_target db:Pfam-A.hmm|PF01025.19 evalue:4e-46 score:155.9 best_domain_score:155.7 name:GrpE;
73913 71250 CDS
ID metaerg.pl|02106
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0003684;
allko_ids K03555;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07014.1 4 886 evalue:0.0e+00 qcov:99.50 identity:75.50;
kegg_pathway_id 03430;
kegg_pathway_name Mismatch repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01624; PF05188; PF05192; PF05190; PF00488;
pfam_desc MutS domain I; MutS domain II; MutS domain III; MutS family domain IV; MutS domain V;
pfam_id MutS_I; MutS_II; MutS_III; MutS_IV; MutS_V;
pfam_target db:Pfam-A.hmm|PF01624.20 evalue:4.5e-41 score:138.9 best_domain_score:137.6 name:MutS_I; db:Pfam-A.hmm|PF05188.17 evalue:6.2e-17 score:61.4 best_domain_score:60.6 name:MutS_II; db:Pfam-A.hmm|PF05192.18 evalue:2e-35 score:122.0 best_domain_score:120.9 name:MutS_III; db:Pfam-A.hmm|PF05190.18 evalue:4e-23 score:80.8 best_domain_score:80.0 name:MutS_IV; db:Pfam-A.hmm|PF00488.21 evalue:2.5e-84 score:281.2 best_domain_score:280.5 name:MutS_V;
sprot_desc DNA mismatch repair protein MutS;
sprot_id sp|A1B095|MUTS_PARDP;
sprot_target db:uniprot_sprot|sp|A1B095|MUTS_PARDP 2 884 evalue:0.0e+00 qcov:99.50 identity:69.70;
tigrfam_acc TIGR01070;
tigrfam_desc DNA mismatch repair protein MutS;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutS1;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01070 evalue:5.6e-257 score:854.4 best_domain_score:854.2 name:TIGR01070;
74035 76296 CDS
ID metaerg.pl|02107
allec_ids 1.1.1.40;
allgo_ids GO:0004471; GO:0055114; GO:0004473; GO:0046872; GO:0051287; GO:0008948; GO:0016746; GO:0006108;
allko_ids K06873; K00029; K13788; K00625;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07015.1 1 752 evalue:0.0e+00 qcov:99.90 identity:88.40;
kegg_pathway_id 00710; 00620; 00640; 00430;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Pyruvate metabolism; Propanoate metabolism; Taurine and hypotaurine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id GLUCONEO-PWY; PWY-241;
metacyc_pathway_name gluconeogenesis I;; C4 photosynthetic carbon assimilation cycle, NADP-ME type;;
metacyc_pathway_type Gluconeogenesis;; Photosynthesis;;
pfam_acc PF00390; PF03949; PF01515;
pfam_desc Malic enzyme, N-terminal domain; Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase;
pfam_id malic; Malic_M; PTA_PTB;
pfam_target db:Pfam-A.hmm|PF00390.19 evalue:4.7e-29 score:100.7 best_domain_score:94.0 name:malic; db:Pfam-A.hmm|PF03949.15 evalue:8.3e-23 score:80.2 best_domain_score:78.9 name:Malic_M; db:Pfam-A.hmm|PF01515.19 evalue:3.4e-74 score:249.3 best_domain_score:248.9 name:PTA_PTB;
sprot_desc NADP-dependent malic enzyme;
sprot_id sp|O30808|MAO2_RHIME;
sprot_target db:uniprot_sprot|sp|O30808|MAO2_RHIME 5 752 evalue:3.3e-258 qcov:99.30 identity:60.50;
76937 76293 CDS
ID metaerg.pl|02108
allec_ids 1.8.4.11;
allgo_ids GO:0008113; GO:0055114; GO:0006464;
allko_ids K07304; K07305; K12267;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06936.1 4 209 evalue:3.3e-76 qcov:96.30 identity:67.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01625;
pfam_desc Peptide methionine sulfoxide reductase;
pfam_id PMSR;
pfam_target db:Pfam-A.hmm|PF01625.21 evalue:2.3e-47 score:160.2 best_domain_score:159.8 name:PMSR;
sp YES;
sprot_desc Peptide methionine sulfoxide reductase MsrA 2;
sprot_id sp|Q92LI5|MSRA2_RHIME;
sprot_target db:uniprot_sprot|sp|Q92LI5|MSRA2_RHIME 20 207 evalue:5.4e-41 qcov:87.90 identity:46.00;
tigrfam_acc TIGR00401;
tigrfam_desc peptide-methionine (S)-S-oxide reductase;
tigrfam_mainrole Cellular processes;
tigrfam_name msrA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00401 evalue:4.4e-40 score:136.7 best_domain_score:136.1 name:TIGR00401;
76293 76364 signal_peptide
ID metaerg.pl|02109
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
78826 77591 CDS
ID metaerg.pl|02110
allec_ids 6.3.4.5;
allgo_ids GO:0004055; GO:0005524; GO:0006526; GO:0005737;
allko_ids K01940; K01955;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06934.1 5 410 evalue:3.4e-218 qcov:98.80 identity:93.30;
kegg_pathway_id 00330; 00252; 00220; 00251; 00240;
kegg_pathway_name Arginine and proline metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Glutamate metabolism; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-4984; PWY-5004; ARGININE-SYN4-PWY; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; PWY-5; ARGSYN-PWY; PWY-5154; PWY-4983;
metacyc_pathway_name urea cycle;; superpathway of L-citrulline metabolism;; L-ornithine biosynthesis II;; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; canavanine biosynthesis;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; nitric oxide biosynthesis II (mammals);;
metacyc_pathway_type NITROGEN-DEG;; Citrulline-Biosynthesis; Super-Pathways;; L-Ornithine-Biosynthesis;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;;
pfam_acc PF00764;
pfam_desc Arginosuccinate synthase;
pfam_id Arginosuc_synth;
pfam_target db:Pfam-A.hmm|PF00764.19 evalue:1.4e-148 score:494.6 best_domain_score:494.4 name:Arginosuc_synth;
sprot_desc Argininosuccinate synthase;
sprot_id sp|Q5LWG3|ASSY_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LWG3|ASSY_RUEPO 5 411 evalue:1.7e-213 qcov:99.00 identity:89.20;
tigrfam_acc TIGR00032;
tigrfam_desc argininosuccinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argG;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00032 evalue:2.6e-138 score:460.8 best_domain_score:460.6 name:TIGR00032;
78955 79746 CDS
ID metaerg.pl|02111
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06933.1 1 261 evalue:2.0e-38 qcov:99.20 identity:40.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
tm_num 6;
78955 79746 transmembrane_helix
ID metaerg.pl|02112
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i79012-79080o79138-79206i79297-79365o79393-79461i79543-79611o79654-79722i;
79739 80191 CDS
ID metaerg.pl|02113
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06932.1 1 146 evalue:4.9e-50 qcov:97.30 identity:65.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF03061; PF13279;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily;
pfam_id 4HBT; 4HBT_2;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:1.8e-05 score:24.3 best_domain_score:23.7 name:4HBT; db:Pfam-A.hmm|PF13279.6 evalue:4.8e-11 score:42.5 best_domain_score:42.2 name:4HBT_2;
81551 80250 CDS
ID metaerg.pl|02114
allgo_ids GO:0005524; GO:0009376; GO:0016887; GO:0070011; GO:0043335;
allko_ids K03667;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06922.1 1 433 evalue:2.8e-199 qcov:100.00 identity:82.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00004; PF07724; PF07728;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); AAA domain (dynein-related subfamily);
pfam_id AAA; AAA_2; AAA_5;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1.1e-14 score:54.3 best_domain_score:26.5 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:7.6e-46 score:155.6 best_domain_score:127.9 name:AAA_2; db:Pfam-A.hmm|PF07728.14 evalue:9.9e-08 score:31.3 best_domain_score:21.4 name:AAA_5;
sprot_desc ATP-dependent protease ATPase subunit HslU;
sprot_id sp|A8LPA9|HSLU_DINSH;
sprot_target db:uniprot_sprot|sp|A8LPA9|HSLU_DINSH 1 433 evalue:9.2e-181 qcov:100.00 identity:76.00;
tigrfam_acc TIGR00390;
tigrfam_desc ATP-dependent protease HslVU, ATPase subunit;
tigrfam_mainrole Protein fate;
tigrfam_name hslU;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR00390 evalue:3.4e-183 score:608.7 best_domain_score:608.2 name:TIGR00390;
82778 81630 CDS
ID metaerg.pl|02115
allec_ids 1.1.1.1;
allgo_ids GO:0016491; GO:0046872; GO:0055114; GO:0005739; GO:0004022;
allko_ids K00001; K13954;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_C;s__Rhodobacter_C vinaykumarii;
genomedb_acc GCF_900156695.1;
genomedb_target db:genomedb|GCF_900156695.1|WP_076366902.1 1 382 evalue:3.0e-176 qcov:100.00 identity:79.60;
kegg_pathway_id 00624; 00010; 00641; 00350; 00071; 00120;
kegg_pathway_name 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis; 3-Chloroacrylic acid degradation; Tyrosine metabolism; Fatty acid metabolism; Bile acid biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-3801; P441-PWY; PWY-5057; PWY-5079; PWY-5078; PWY-5076; PWY-6028; P461-PWY; P601-PWY; PWY3O-4108; PWY-5082; FERMENTATION-PWY; PWY-3722; PWY-6333; PWY-5486; P161-PWY; ETOH-ACETYLCOA-ANA-PWY; P122-PWY; PWY66-21;
metacyc_pathway_name sucrose degradation II (sucrose synthase);; superpathway of N-acetylneuraminate degradation;; L-valine degradation II;; L-phenylalanine degradation III;; L-isoleucine degradation II;; L-leucine degradation III;; acetoin degradation;; hexitol fermentation to lactate, formate, ethanol and acetate;; (+)-camphor degradation;; L-tyrosine degradation III;; L-methionine degradation III;; mixed acid fermentation;; glycine betaine biosynthesis II (Gram-positive bacteria);; acetaldehyde biosynthesis I;; pyruvate fermentation to ethanol II;; acetylene degradation (anaerobic);; ethanol degradation I;; heterolactic fermentation;; ethanol degradation II;;
metacyc_pathway_type SUCROSE-DEG;; CARBOXYLATES-DEG; Super-Pathways;; VALINE-DEG;; PHENYLALANINE-DEG;; ISOLEUCINE-DEG;; LEUCINE-DEG;; Carbohydrates-Degradation;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Camphor-Degradation;; TYROSINE-DEG;; METHIONINE-DEG;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Betaine-Biosynthesis;; Acetaldehyde-Biosynthesis;; Pyruvate-Ethanol-Fermentation;; Acetate-Formation; Pyruvate-Ethanol-Fermentation;; Ethanol-Degradation;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Ethanol-Degradation;;
pfam_acc PF00465; PF13685;
pfam_desc Iron-containing alcohol dehydrogenase ; Iron-containing alcohol dehydrogenase;
pfam_id Fe-ADH; Fe-ADH_2;
pfam_target db:Pfam-A.hmm|PF00465.19 evalue:7.1e-113 score:376.3 best_domain_score:376.2 name:Fe-ADH; db:Pfam-A.hmm|PF13685.6 evalue:6.2e-17 score:61.4 best_domain_score:31.3 name:Fe-ADH_2;
sprot_desc Alcohol dehydrogenase 4;
sprot_id sp|A6ZTT5|ADH4_YEAS7;
sprot_target db:uniprot_sprot|sp|A6ZTT5|ADH4_YEAS7 16 378 evalue:1.8e-50 qcov:95.00 identity:33.70;
84154 82775 CDS
ID metaerg.pl|02116
allec_ids 1.2.1.16;
allgo_ids GO:0016491; GO:0055114; GO:0009013; GO:0006099;
allko_ids K00155;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07428.1 2 458 evalue:3.3e-214 qcov:99.60 identity:81.00;
kegg_pathway_id 00281; 00624; 00903; 00626; 00380;
kegg_pathway_name Geraniol degradation; 1- and 2-Methylnaphthalene degradation; Limonene and pinene degradation; Naphthalene and anthracene degradation; Tryptophan metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-6536;
metacyc_pathway_name 4-aminobutanoate degradation III;;
metacyc_pathway_type 4-Aminobutyraye-Degradation;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:4.4e-115 score:384.1 best_domain_score:383.9 name:Aldedh;
sprot_desc Succinate-semialdehyde dehydrogenase [NADP(+)] 1;
sprot_id sp|Q7U2I0|GABD1_MYCBO;
sprot_target db:uniprot_sprot|sp|Q7U2I0|GABD1_MYCBO 2 451 evalue:4.1e-54 qcov:98.00 identity:31.90;
85534 84167 CDS
ID metaerg.pl|02117
allec_ids 6.3.1.2;
allgo_ids GO:0004356; GO:0006807; GO:0005737; GO:0005524; GO:0046872; GO:0006542;
allko_ids K01915;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07429.1 1 455 evalue:2.3e-207 qcov:100.00 identity:77.60;
kegg_pathway_id 02020; 00910; 00550; 00251;
kegg_pathway_name Two-component system - General; Nitrogen metabolism; Peptidoglycan biosynthesis; Glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-6549; GLNSYN-PWY; PWY490-3; AMMASSIM-PWY; PWY-381; PWY-5675; PWY-5505;
metacyc_pathway_name L-glutamine biosynthesis III;; L-glutamine biosynthesis I;; nitrate reduction VI (assimilatory);; ammonia assimilation cycle III;; nitrate reduction II (assimilatory);; nitrate reduction V (assimilatory);; L-glutamate and L-glutamine biosynthesis;;
metacyc_pathway_type GLUTAMINE-SYN;; Ammonia-Assimilation; GLUTAMINE-SYN;; Nitrate-Reduction;; Ammonia-Assimilation; Super-Pathways;; Nitrate-Reduction;; Nitrate-Reduction;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;;
pfam_acc PF00120;
pfam_desc Glutamine synthetase, catalytic domain;
pfam_id Gln-synt_C;
pfam_target db:Pfam-A.hmm|PF00120.24 evalue:1.8e-103 score:345.4 best_domain_score:345.1 name:Gln-synt_C;
sprot_desc Glutamine synthetase;
sprot_id sp|P10656|GLN1A_CLOSA;
sprot_target db:uniprot_sprot|sp|P10656|GLN1A_CLOSA 81 449 evalue:6.3e-47 qcov:81.10 identity:34.90;
85975 85550 CDS
ID metaerg.pl|02118
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245732.1 1 138 evalue:1.0e-36 qcov:97.90 identity:57.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:6.8e-24 score:84.2 best_domain_score:84.0 name:Usp;
86164 88032 CDS
ID metaerg.pl|02119
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887;
allko_ids K02045; K06861; K02071; K01996; K02017; K02052; K02006; K02010; K05847; K02000; K02023; K10111; K01995; K18893;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06905.1 8 622 evalue:7.0e-292 qcov:98.90 identity:83.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00664; PF00005; PF01926;
pfam_desc ABC transporter transmembrane region; ABC transporter; 50S ribosome-binding GTPase;
pfam_id ABC_membrane; ABC_tran; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:1.5e-18 score:66.6 best_domain_score:66.0 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:3.6e-36 score:123.9 best_domain_score:123.3 name:ABC_tran; db:Pfam-A.hmm|PF01926.23 evalue:2.6e-05 score:23.5 best_domain_score:20.1 name:MMR_HSR1;
sprot_desc Uncharacterized ABC transporter ATP-binding protein HI_1051;
sprot_id sp|Q57180|Y1051_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57180|Y1051_HAEIN 12 619 evalue:3.5e-141 qcov:97.70 identity:44.90;
tm_num 5;
86164 88032 transmembrane_helix
ID metaerg.pl|02120
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i86299-86367o86410-86478i86653-86721o86737-86796i86995-87063o;
88492 88043 CDS
ID metaerg.pl|02121
allgo_ids GO:0043565; GO:0003700;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06252.1 1 149 evalue:2.6e-59 qcov:100.00 identity:74.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01037; PF08279; PF12840; PF13412; PF13404; PF13545; PF09339; PF01047;
pfam_desc Lrp/AsnC ligand binding domain; HTH domain; Helix-turn-helix domain; Winged helix-turn-helix DNA-binding; AsnC-type helix-turn-helix domain; Crp-like helix-turn-helix domain; IclR helix-turn-helix domain; MarR family;
pfam_id AsnC_trans_reg; HTH_11; HTH_20; HTH_24; HTH_AsnC-type; HTH_Crp_2; HTH_IclR; MarR;
pfam_target db:Pfam-A.hmm|PF01037.21 evalue:1.2e-20 score:72.5 best_domain_score:72.0 name:AsnC_trans_reg; db:Pfam-A.hmm|PF08279.12 evalue:2.1e-06 score:26.8 best_domain_score:26.1 name:HTH_11; db:Pfam-A.hmm|PF12840.7 evalue:5.4e-08 score:32.0 best_domain_score:27.0 name:HTH_20; db:Pfam-A.hmm|PF13412.6 evalue:2.3e-20 score:71.1 best_domain_score:70.0 name:HTH_24; db:Pfam-A.hmm|PF13404.6 evalue:1.7e-16 score:59.0 best_domain_score:58.1 name:HTH_AsnC-type; db:Pfam-A.hmm|PF13545.6 evalue:1.2e-06 score:27.7 best_domain_score:26.9 name:HTH_Crp_2; db:Pfam-A.hmm|PF09339.10 evalue:7.1e-07 score:28.2 best_domain_score:25.2 name:HTH_IclR; db:Pfam-A.hmm|PF01047.22 evalue:8.7e-06 score:24.8 best_domain_score:24.2 name:MarR;
sprot_desc Uncharacterized HTH-type transcriptional regulator y4sM;
sprot_id sp|P50337|Y4SM_SINFN;
sprot_target db:uniprot_sprot|sp|P50337|Y4SM_SINFN 30 144 evalue:7.7e-18 qcov:77.20 identity:38.30;
88633 92034 CDS
ID metaerg.pl|02122
allgo_ids GO:0016903; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06251.1 1 1132 evalue:0.0e+00 qcov:99.90 identity:81.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01558;
pfam_desc Pyruvate ferredoxin/flavodoxin oxidoreductase;
pfam_id POR;
pfam_target db:Pfam-A.hmm|PF01558.18 evalue:1.4e-18 score:66.8 best_domain_score:66.1 name:POR;
92508 92140 CDS
ID metaerg.pl|02123
allgo_ids GO:0003700; GO:0006355;
casgene_acc COG0640_csa3_CAS-I-A;
casgene_name csa3;
casgene_target db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:1.5e-13 score:50.3 best_domain_score:50.2 name:csa3;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Mangrovicoccus;s__Mangrovicoccus sp003254465;
genomedb_acc GCF_003254465.1;
genomedb_target db:genomedb|GCF_003254465.1|WP_111404204.1 5 114 evalue:3.3e-44 qcov:90.20 identity:88.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF12840; PF01022;
pfam_desc Helix-turn-helix domain; Bacterial regulatory protein, arsR family;
pfam_id HTH_20; HTH_5;
pfam_target db:Pfam-A.hmm|PF12840.7 evalue:2.7e-13 score:49.0 best_domain_score:48.6 name:HTH_20; db:Pfam-A.hmm|PF01022.20 evalue:1.8e-10 score:39.8 best_domain_score:39.4 name:HTH_5;
92713 93060 CDS
ID metaerg.pl|02124
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28406.1 1 111 evalue:3.4e-27 qcov:96.50 identity:58.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF09527;
pfam_desc Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter;
pfam_id ATPase_gene1;
pfam_target db:Pfam-A.hmm|PF09527.10 evalue:8.3e-14 score:50.7 best_domain_score:50.3 name:ATPase_gene1;
tm_num 2;
92713 93060 transmembrane_helix
ID metaerg.pl|02125
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i92827-92895o92923-92976i;
93032 93799 CDS
ID metaerg.pl|02126
allec_ids 3.6.3.14;
allgo_ids GO:0015078; GO:0015986; GO:0045263; GO:0016021; GO:0005886; GO:0046933;
allko_ids K12524; K02108; K02126;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092885291.1 6 255 evalue:5.7e-99 qcov:98.00 identity:76.80;
kegg_pathway_id 00195; 05012; 00190;
kegg_pathway_name Photosynthesis; Parkinson's disease; Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-6126; PRPP-PWY; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00119;
pfam_desc ATP synthase A chain;
pfam_id ATP-synt_A;
pfam_target db:Pfam-A.hmm|PF00119.20 evalue:1.3e-53 score:181.4 best_domain_score:181.1 name:ATP-synt_A;
sprot_desc ATP synthase subunit a;
sprot_id sp|Q16AM8|ATP6_ROSDO;
sprot_target db:uniprot_sprot|sp|Q16AM8|ATP6_ROSDO 7 255 evalue:3.4e-82 qcov:97.60 identity:67.90;
tigrfam_acc TIGR01131;
tigrfam_desc ATP synthase F0, A subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATP_synt_6_or_A;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01131 evalue:8.1e-60 score:201.7 best_domain_score:201.5 name:TIGR01131;
tm_num 5;
93032 93799 transmembrane_helix
ID metaerg.pl|02127
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology o93140-93208i93311-93379o93407-93475i93635-93703o93716-93772i;
93861 94097 CDS
ID metaerg.pl|02128
allgo_ids GO:0015078; GO:0033177; GO:0016021; GO:0005886; GO:0045263; GO:0008289; GO:0046933; GO:0015991; GO:0015986;
allko_ids K02124; K00872; K02110; K03661; K02155; K02128;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470100.1 1 78 evalue:6.1e-28 qcov:100.00 identity:93.60;
kegg_pathway_id 00190; 05012; 00260; 00195;
kegg_pathway_name Oxidative phosphorylation; Parkinson's disease; Glycine, serine and threonine metabolism; Photosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00137;
pfam_desc ATP synthase subunit C;
pfam_id ATP-synt_C;
pfam_target db:Pfam-A.hmm|PF00137.21 evalue:5e-09 score:35.6 best_domain_score:35.3 name:ATP-synt_C;
sprot_desc ATP synthase subunit c;
sprot_id sp|Q28UC7|ATPL_JANSC;
sprot_target db:uniprot_sprot|sp|Q28UC7|ATPL_JANSC 1 78 evalue:9.5e-20 qcov:100.00 identity:83.30;
tm_num 2;
93861 94097 transmembrane_helix
ID metaerg.pl|02129
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i93894-93962o94020-94088i;
94189 94710 CDS
ID metaerg.pl|02130
allgo_ids GO:0015078; GO:0015986; GO:0045263;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109531668.1 10 173 evalue:2.7e-52 qcov:94.80 identity:74.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00430; PF02326;
pfam_desc ATP synthase B/B' CF(0); Plant ATP synthase F0;
pfam_id ATP-synt_B; YMF19;
pfam_target db:Pfam-A.hmm|PF00430.18 evalue:2e-18 score:66.0 best_domain_score:65.5 name:ATP-synt_B; db:Pfam-A.hmm|PF02326.15 evalue:4.7e-10 score:39.4 best_domain_score:39.1 name:YMF19;
tm_num 1;
94189 94710 transmembrane_helix
ID metaerg.pl|02131
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology o94246-94314i;
94710 95282 CDS
ID metaerg.pl|02132
allgo_ids GO:0015078; GO:0015986; GO:0045263;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06877.1 6 190 evalue:1.4e-49 qcov:97.40 identity:66.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00430; PF05405;
pfam_desc ATP synthase B/B' CF(0); Mitochondrial ATP synthase B chain precursor (ATP-synt_B);
pfam_id ATP-synt_B; Mt_ATP-synt_B;
pfam_target db:Pfam-A.hmm|PF00430.18 evalue:2.4e-20 score:72.2 best_domain_score:72.2 name:ATP-synt_B; db:Pfam-A.hmm|PF05405.14 evalue:1.9e-08 score:33.3 best_domain_score:33.0 name:Mt_ATP-synt_B;
sp YES;
tm_num 2;
94710 94775 signal_peptide
ID metaerg.pl|02133
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
94710 95282 transmembrane_helix
ID metaerg.pl|02134
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i94722-94778o94821-94889i;
96274 95369 CDS
ID metaerg.pl|02135
allec_ids 2.1.2.9;
allgo_ids GO:0009058; GO:0016742; GO:0004479;
allko_ids K11175; K11788; K01933; K11787; K00604;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796061.1 1 291 evalue:6.0e-116 qcov:96.70 identity:73.20;
kegg_pathway_id 00271; 00230; 00670; 00970;
kegg_pathway_name Methionine metabolism; Purine metabolism; One carbon pool by folate; Aminoacyl-tRNA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF02911; PF00551;
pfam_desc Formyl transferase, C-terminal domain; Formyl transferase;
pfam_id Formyl_trans_C; Formyl_trans_N;
pfam_target db:Pfam-A.hmm|PF02911.18 evalue:2.9e-22 score:78.0 best_domain_score:77.3 name:Formyl_trans_C; db:Pfam-A.hmm|PF00551.19 evalue:7.6e-44 score:148.8 best_domain_score:148.4 name:Formyl_trans_N;
sprot_desc Methionyl-tRNA formyltransferase;
sprot_id sp|Q5LNI8|FMT_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LNI8|FMT_RUEPO 1 300 evalue:2.8e-112 qcov:99.70 identity:68.40;
tigrfam_acc TIGR00460;
tigrfam_desc methionyl-tRNA formyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name fmt;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00460 evalue:6.5e-82 score:274.3 best_domain_score:274.0 name:TIGR00460;
96451 96759 CDS
ID metaerg.pl|02136
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
tm_num 3;
96451 96759 transmembrane_helix
ID metaerg.pl|02137
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i96469-96537o96604-96672i96685-96753o;
97295 96756 CDS
ID metaerg.pl|02138
allec_ids 3.5.1.88;
allgo_ids GO:0046872; GO:0042586; GO:0006412;
allko_ids K01462;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger;s__Salipiger mucosus;
genomedb_acc GCF_000442255.1;
genomedb_target db:genomedb|GCF_000442255.1|WP_020040662.1 1 167 evalue:1.3e-68 qcov:93.30 identity:80.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01327;
pfam_desc Polypeptide deformylase;
pfam_id Pep_deformylase;
pfam_target db:Pfam-A.hmm|PF01327.21 evalue:3.2e-36 score:123.6 best_domain_score:123.4 name:Pep_deformylase;
sprot_desc Peptide deformylase;
sprot_id sp|B6JJP8|DEF_OLICO;
sprot_target db:uniprot_sprot|sp|B6JJP8|DEF_OLICO 1 169 evalue:1.8e-29 qcov:94.40 identity:42.70;
tigrfam_acc TIGR00079;
tigrfam_desc peptide deformylase;
tigrfam_mainrole Protein fate;
tigrfam_name pept_deformyl;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00079 evalue:2.7e-36 score:123.7 best_domain_score:123.5 name:TIGR00079;
97820 97299 CDS
ID metaerg.pl|02139
allec_ids 3.5.1.88;
allgo_ids GO:0046872; GO:0042586; GO:0006412;
allko_ids K01462;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07313.1 1 173 evalue:2.4e-72 qcov:100.00 identity:75.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01327;
pfam_desc Polypeptide deformylase;
pfam_id Pep_deformylase;
pfam_target db:Pfam-A.hmm|PF01327.21 evalue:5.5e-50 score:168.3 best_domain_score:168.1 name:Pep_deformylase;
sprot_desc Peptide deformylase;
sprot_id sp|Q07TX0|DEF_RHOP5;
sprot_target db:uniprot_sprot|sp|Q07TX0|DEF_RHOP5 1 165 evalue:1.6e-46 qcov:95.40 identity:54.80;
tigrfam_acc TIGR00079;
tigrfam_desc peptide deformylase;
tigrfam_mainrole Protein fate;
tigrfam_name pept_deformyl;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00079 evalue:1.7e-46 score:156.9 best_domain_score:156.6 name:TIGR00079;
97946 98566 CDS
ID metaerg.pl|02140
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sediminimonas;s__Sediminimonas qiaohouensis;
genomedb_acc GCF_000423645.1;
genomedb_target db:genomedb|GCF_000423645.1|WP_051203031.1 1 205 evalue:4.5e-62 qcov:99.50 identity:58.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF08241; PF13489; PF13649;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain;
pfam_id Methyltransf_11; Methyltransf_23; Methyltransf_25;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:1.1e-05 score:25.3 best_domain_score:24.2 name:Methyltransf_11; db:Pfam-A.hmm|PF13489.6 evalue:5.1e-08 score:32.2 best_domain_score:31.8 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.5e-08 score:34.5 best_domain_score:33.4 name:Methyltransf_25;
98665 99837 CDS
ID metaerg.pl|02141
allec_ids 4.4.1.13; 4.4.-.-;
allgo_ids GO:0009058; GO:0030170; GO:0047804; GO:0009086;
allko_ids K01760; K00842; K00837; K14155; K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07314.1 1 390 evalue:2.0e-172 qcov:100.00 identity:74.40;
kegg_pathway_id 00300; 00272; 00920; 00271; 00310; 00910; 00450;
kegg_pathway_name Lysine biosynthesis; Cysteine metabolism; Sulfur metabolism; Methionine metabolism; Lysine degradation; Nitrogen metabolism; Selenoamino acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:4.7e-36 score:123.9 best_domain_score:123.7 name:Aminotran_1_2;
sprot_desc Cystathionine beta-lyase PatB;
sprot_id sp|Q08432|CBL_BACSU;
sprot_target db:uniprot_sprot|sp|Q08432|CBL_BACSU 1 387 evalue:1.0e-77 qcov:99.20 identity:39.20;
tigrfam_acc TIGR04350;
tigrfam_desc putative C-S lyase;
tigrfam_name C_S_lyase_PatB;
tigrfam_target db:TIGRFAMs.hmm|TIGR04350 evalue:2.6e-120 score:401.0 best_domain_score:400.8 name:TIGR04350;
99877 101670 CDS
ID metaerg.pl|02142
allgo_ids GO:0016829;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07304.1 12 590 evalue:2.7e-176 qcov:97.00 identity:57.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF07940;
pfam_desc Heparinase II/III-like protein;
pfam_id Hepar_II_III;
pfam_target db:Pfam-A.hmm|PF07940.13 evalue:4e-58 score:196.1 best_domain_score:195.5 name:Hepar_II_III;
101692 103278 CDS
ID metaerg.pl|02143
allec_ids 2.1.2.3; 3.5.4.10; 2.1.2.3 3.5.4.10;
allgo_ids GO:0003937; GO:0004643; GO:0006164; GO:0006189;
allko_ids K00602; K01492;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245452.1 1 528 evalue:7.8e-244 qcov:100.00 identity:83.60;
kegg_pathway_id 00230; 00670;
kegg_pathway_name Purine metabolism; One carbon pool by folate;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PRPP-PWY; PWY-841; PWY-6123; DENOVOPURINE2-PWY; PWY-6124;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; inosine-5'-phosphate biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis II;; inosine-5'-phosphate biosynthesis II;;
metacyc_pathway_type Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;;
pfam_acc PF01808; PF02142;
pfam_desc AICARFT/IMPCHase bienzyme; MGS-like domain;
pfam_id AICARFT_IMPCHas; MGS;
pfam_target db:Pfam-A.hmm|PF01808.18 evalue:6.2e-118 score:392.8 best_domain_score:392.5 name:AICARFT_IMPCHas; db:Pfam-A.hmm|PF02142.22 evalue:2.8e-25 score:87.6 best_domain_score:86.6 name:MGS;
sprot_desc Bifunctional purine biosynthesis protein PurH;
sprot_id sp|A3PNE9|PUR9_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PNE9|PUR9_RHOS1 1 528 evalue:1.8e-226 qcov:100.00 identity:78.40;
tigrfam_acc TIGR00355;
tigrfam_desc phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purH;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00355 evalue:6.1e-207 score:687.6 best_domain_score:687.5 name:TIGR00355;
103280 103765 CDS
ID metaerg.pl|02144
allec_ids 3.4.23.36;
allgo_ids GO:0004190; GO:0006508; GO:0016020; GO:0016021; GO:0005886;
allko_ids K03101;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07302.1 1 153 evalue:3.0e-53 qcov:95.00 identity:68.60;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01252;
pfam_desc Signal peptidase (SPase) II;
pfam_id Peptidase_A8;
pfam_target db:Pfam-A.hmm|PF01252.18 evalue:3.9e-32 score:110.7 best_domain_score:110.4 name:Peptidase_A8;
sp YES;
sprot_desc Lipoprotein signal peptidase;
sprot_id sp|A9W565|LSPA_METEP;
sprot_target db:uniprot_sprot|sp|A9W565|LSPA_METEP 2 155 evalue:3.1e-17 qcov:95.70 identity:39.00;
tigrfam_acc TIGR00077;
tigrfam_desc signal peptidase II;
tigrfam_mainrole Protein fate;
tigrfam_name lspA;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00077 evalue:4.5e-26 score:90.8 best_domain_score:90.6 name:TIGR00077;
tm_num 3;
103280 103336 signal_peptide
ID metaerg.pl|02145
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
103280 103765 transmembrane_helix
ID metaerg.pl|02146
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology o103463-103522i103559-103627o103655-103723i;
103851 104366 CDS
ID metaerg.pl|02147
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07301.1 2 169 evalue:2.5e-50 qcov:98.20 identity:65.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF11233;
pfam_desc Protein of unknown function (DUF3035);
pfam_id DUF3035;
pfam_target db:Pfam-A.hmm|PF11233.8 evalue:1.8e-41 score:141.0 best_domain_score:140.7 name:DUF3035;
sp YES;
103851 103898 lipoprotein_signal_peptide
ID metaerg.pl|02148
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
104470 105861 CDS
ID metaerg.pl|02149
allec_ids 3.4.24.-;
allgo_ids GO:0016021; GO:0005886; GO:0046872; GO:0004222;
allko_ids K07263;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07300.1 11 453 evalue:2.8e-144 qcov:95.70 identity:61.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00675; PF05193;
pfam_desc Insulinase (Peptidase family M16); Peptidase M16 inactive domain;
pfam_id Peptidase_M16; Peptidase_M16_C;
pfam_target db:Pfam-A.hmm|PF00675.20 evalue:1.3e-26 score:92.6 best_domain_score:91.9 name:Peptidase_M16; db:Pfam-A.hmm|PF05193.21 evalue:3.1e-27 score:95.0 best_domain_score:94.4 name:Peptidase_M16_C;
sp YES;
sprot_desc Uncharacterized zinc protease y4wA;
sprot_id sp|P55679|Y4WA_SINFN;
sprot_target db:uniprot_sprot|sp|P55679|Y4WA_SINFN 10 459 evalue:6.6e-76 qcov:97.20 identity:38.20;
tm_num 1;
104470 104553 signal_peptide
ID metaerg.pl|02150
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
104470 105861 transmembrane_helix
ID metaerg.pl|02151
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i104503-104571o;
105858 107186 CDS
ID metaerg.pl|02152
allgo_ids GO:0003824; GO:0046872;
allko_ids K07263;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07299.1 18 438 evalue:3.3e-155 qcov:95.20 identity:66.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00675; PF05193;
pfam_desc Insulinase (Peptidase family M16); Peptidase M16 inactive domain;
pfam_id Peptidase_M16; Peptidase_M16_C;
pfam_target db:Pfam-A.hmm|PF00675.20 evalue:4.2e-06 score:26.0 best_domain_score:25.5 name:Peptidase_M16; db:Pfam-A.hmm|PF05193.21 evalue:1.4e-20 score:73.3 best_domain_score:68.3 name:Peptidase_M16_C;
sp YES;
sprot_desc Uncharacterized zinc protease-like protein y4wB;
sprot_id sp|P55680|Y4WB_SINFN;
sprot_target db:uniprot_sprot|sp|P55680|Y4WB_SINFN 11 424 evalue:1.8e-59 qcov:93.70 identity:33.90;
105858 105929 signal_peptide
ID metaerg.pl|02153
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
107804 107202 CDS
ID metaerg.pl|02154
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068297584.1 1 199 evalue:2.1e-88 qcov:99.50 identity:79.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF06938;
pfam_desc Protein of unknown function (DUF1285);
pfam_id DUF1285;
pfam_target db:Pfam-A.hmm|PF06938.11 evalue:1.2e-60 score:203.0 best_domain_score:202.8 name:DUF1285;
107931 108935 CDS
ID metaerg.pl|02155
allgo_ids GO:0005524; GO:0016887;
allko_ids K03924;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109535350.1 1 334 evalue:9.6e-147 qcov:100.00 identity:83.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF07726; PF07728; PF17863; PF05496; PF00158;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); AAA lid domain; Holliday junction DNA helicase RuvB P-loop domain; Sigma-54 interaction domain;
pfam_id AAA_3; AAA_5; AAA_lid_2; RuvB_N; Sigma54_activat;
pfam_target db:Pfam-A.hmm|PF07726.11 evalue:4e-59 score:197.4 best_domain_score:196.6 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:7.7e-14 score:51.1 best_domain_score:50.1 name:AAA_5; db:Pfam-A.hmm|PF17863.1 evalue:8.8e-11 score:40.7 best_domain_score:40.7 name:AAA_lid_2; db:Pfam-A.hmm|PF05496.12 evalue:8.2e-05 score:21.6 best_domain_score:15.1 name:RuvB_N; db:Pfam-A.hmm|PF00158.26 evalue:2.7e-05 score:23.2 best_domain_score:21.3 name:Sigma54_activat;
sprot_desc hypothetical protein;
sprot_id sp|P94474|YEAC_BACSU;
sprot_target db:uniprot_sprot|sp|P94474|YEAC_BACSU 10 334 evalue:1.6e-47 qcov:97.30 identity:39.30;
108976 109872 CDS
ID metaerg.pl|02156
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07413.1 1 291 evalue:5.8e-103 qcov:97.70 identity:67.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01882;
pfam_desc Protein of unknown function DUF58;
pfam_id DUF58;
pfam_target db:Pfam-A.hmm|PF01882.18 evalue:1.7e-12 score:46.7 best_domain_score:45.2 name:DUF58;
sp YES;
108976 109071 signal_peptide
ID metaerg.pl|02157
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
109872 112658 CDS
ID metaerg.pl|02158
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07414.1 2 928 evalue:0.0e+00 qcov:99.90 identity:67.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF07584; PF13709;
pfam_desc Aerotolerance regulator N-terminal; Domain of unknown function (DUF4159);
pfam_id BatA; DUF4159;
pfam_target db:Pfam-A.hmm|PF07584.11 evalue:2.5e-16 score:59.1 best_domain_score:59.1 name:BatA; db:Pfam-A.hmm|PF13709.6 evalue:7.3e-54 score:181.5 best_domain_score:179.1 name:DUF4159;
tigrfam_acc TIGR02226;
tigrfam_desc N-terminal double-transmembrane domain;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name two_anch;
tigrfam_sub1role Domain;
tigrfam_target db:TIGRFAMs.hmm|TIGR02226 evalue:9.5e-18 score:63.4 best_domain_score:63.4 name:TIGR02226;
tm_num 2;
109872 112658 transmembrane_helix
ID metaerg.pl|02159
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology o109881-109949i110043-110111o;
112655 114736 CDS
ID metaerg.pl|02160
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07415.1 1 693 evalue:2.0e-284 qcov:100.00 identity:70.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
tm_num 3;
112655 114736 transmembrane_helix
ID metaerg.pl|02161
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology o112682-112750i112769-112828o114650-114718i;
115925 114945 CDS
ID metaerg.pl|02162
allec_ids 1.1.1.94;
allgo_ids GO:0004367; GO:0005975; GO:0055114; GO:0009331; GO:0047952; GO:0051287; GO:0046167; GO:0046168; GO:0006650; GO:0008654;
allko_ids K00006; K00057;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28174.1 1 324 evalue:1.0e-105 qcov:99.40 identity:67.90;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PHOSLIPSYN-PWY; PWY4FS-8; PWY0-1319; PWY4FS-7; PWY-5981; PHOSLIPSYN2-PWY; PWY-5667;
metacyc_pathway_name superpathway of phospholipid biosynthesis I (bacteria);; phosphatidylglycerol biosynthesis II (non-plastidic);; CDP-diacylglycerol biosynthesis II;; phosphatidylglycerol biosynthesis I (plastidic);; CDP-diacylglycerol biosynthesis III;; superpathway of phospholipid biosynthesis II (plants);; CDP-diacylglycerol biosynthesis I;;
metacyc_pathway_type Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;;
pfam_acc PF03807; PF07479; PF01210; PF10727;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; Rossmann-like domain;
pfam_id F420_oxidored; NAD_Gly3P_dh_C; NAD_Gly3P_dh_N; Rossmann-like;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:5e-08 score:32.7 best_domain_score:31.4 name:F420_oxidored; db:Pfam-A.hmm|PF07479.14 evalue:1.6e-35 score:121.7 best_domain_score:121.2 name:NAD_Gly3P_dh_C; db:Pfam-A.hmm|PF01210.23 evalue:9.4e-41 score:138.6 best_domain_score:137.8 name:NAD_Gly3P_dh_N; db:Pfam-A.hmm|PF10727.9 evalue:2.9e-07 score:29.6 best_domain_score:29.6 name:Rossmann-like;
sp YES;
sprot_desc Glycerol-3-phosphate dehydrogenase [NAD(P)+];
sprot_id sp|Q5LLR6|GPDA_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LLR6|GPDA_RUEPO 6 324 evalue:4.9e-78 qcov:97.90 identity:55.00;
114945 115019 signal_peptide
ID metaerg.pl|02163
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
116087 117379 CDS
ID metaerg.pl|02164
allec_ids 6.3.4.21;
allgo_ids GO:0004516; GO:0004514; GO:0009435; GO:0019357;
allko_ids K00763;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05522.1 1 430 evalue:9.0e-222 qcov:100.00 identity:86.50;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF04095; PF17767;
pfam_desc Nicotinate phosphoribosyltransferase (NAPRTase) family; Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain;
pfam_id NAPRTase; NAPRTase_N;
pfam_target db:Pfam-A.hmm|PF04095.16 evalue:8.5e-61 score:204.8 best_domain_score:204.5 name:NAPRTase; db:Pfam-A.hmm|PF17767.1 evalue:4.8e-24 score:84.4 best_domain_score:83.7 name:NAPRTase_N;
sprot_desc Nicotinate phosphoribosyltransferase;
sprot_id sp|B9JYR4|PNCB_AGRVS;
sprot_target db:uniprot_sprot|sp|B9JYR4|PNCB_AGRVS 3 419 evalue:9.2e-157 qcov:97.00 identity:61.80;
tigrfam_acc TIGR01514;
tigrfam_desc nicotinate phosphoribosyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name NAPRTase;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01514 evalue:1.5e-84 score:283.5 best_domain_score:283.3 name:TIGR01514;
117891 117451 CDS
ID metaerg.pl|02165
allgo_ids GO:0016787;
allko_ids K08310; K01515; K01529; K03574;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE48183.1 1 141 evalue:4.8e-58 qcov:96.60 identity:74.60;
kegg_pathway_id 00230; 00790;
kegg_pathway_name Purine metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:4.8e-17 score:61.5 best_domain_score:61.2 name:NUDIX;
118036 119094 CDS
ID metaerg.pl|02166
allgo_ids GO:0005737; GO:0006457; GO:0051082;
allko_ids K04083;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06902.1 1 324 evalue:6.1e-144 qcov:92.00 identity:78.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01430;
pfam_desc Hsp33 protein;
pfam_id HSP33;
pfam_target db:Pfam-A.hmm|PF01430.19 evalue:6.2e-75 score:251.3 best_domain_score:251.1 name:HSP33;
sprot_desc 33 kDa chaperonin;
sprot_id sp|P58097|HSLO_CAUVC;
sprot_target db:uniprot_sprot|sp|P58097|HSLO_CAUVC 10 317 evalue:1.1e-54 qcov:87.50 identity:35.70;
119078 119716 CDS
ID metaerg.pl|02167
allec_ids 3.6.1.-;
allgo_ids GO:0016787; GO:0016818; GO:0000287; GO:0030145; GO:0009132;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06903.1 1 200 evalue:2.4e-71 qcov:94.30 identity:68.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-6383; FOLSYN-PWY; ALL-CHORISMATE-PWY; PWY-6147; PWY-6502; PWY-5354; PWY-6404;
metacyc_pathway_name mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; oxidized GTP and dGTP detoxification;; ; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;; 6-HM-Dihydropterin-PP-Biosynthesis;; Detoxification; Metabolic-Clusters;; ; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:4.4e-17 score:61.6 best_domain_score:61.2 name:NUDIX;
sprot_desc Uncharacterized Nudix hydrolase NudL;
sprot_id sp|A4WBH1|NUDL_ENT38;
sprot_target db:uniprot_sprot|sp|A4WBH1|NUDL_ENT38 40 196 evalue:1.9e-25 qcov:74.10 identity:44.10;
119742 120920 CDS
ID metaerg.pl|02168
allgo_ids GO:0003723; GO:0006396; GO:0016779;
allko_ids K00970; K00974;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06904.1 1 381 evalue:2.0e-119 qcov:97.20 identity:63.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01743; PF12627;
pfam_desc Poly A polymerase head domain; Probable RNA and SrmB- binding site of polymerase A;
pfam_id PolyA_pol; PolyA_pol_RNAbd;
pfam_target db:Pfam-A.hmm|PF01743.20 evalue:5.2e-26 score:90.8 best_domain_score:90.2 name:PolyA_pol; db:Pfam-A.hmm|PF12627.7 evalue:2.9e-07 score:29.4 best_domain_score:27.1 name:PolyA_pol_RNAbd;
123304 121175 CDS
ID metaerg.pl|02169
allec_ids 2.7.7.8;
allgo_ids GO:0003723; GO:0005737; GO:0000287; GO:0004654; GO:0006402; GO:0006396;
allko_ids K03049; K00962; K03022; K12818;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07481.1 1 709 evalue:0.0e+00 qcov:100.00 identity:91.40;
kegg_pathway_id 00230; 03020; 00240;
kegg_pathway_name Purine metabolism; RNA polymerase; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00013; PF03726; PF01138; PF03725; PF00575;
pfam_desc KH domain; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; S1 RNA binding domain;
pfam_id KH_1; PNPase; RNase_PH; RNase_PH_C; S1;
pfam_target db:Pfam-A.hmm|PF00013.29 evalue:1.8e-10 score:39.7 best_domain_score:37.5 name:KH_1; db:Pfam-A.hmm|PF03726.14 evalue:1.5e-14 score:53.5 best_domain_score:52.6 name:PNPase; db:Pfam-A.hmm|PF01138.21 evalue:1.8e-45 score:153.9 best_domain_score:78.8 name:RNase_PH; db:Pfam-A.hmm|PF03725.15 evalue:2.1e-15 score:55.7 best_domain_score:32.0 name:RNase_PH_C; db:Pfam-A.hmm|PF00575.23 evalue:3.9e-17 score:61.6 best_domain_score:60.6 name:S1;
sprot_desc Polyribonucleotide nucleotidyltransferase;
sprot_id sp|A4WWP0|PNP_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WWP0|PNP_RHOS5 1 709 evalue:0.0e+00 qcov:100.00 identity:86.00;
tigrfam_acc TIGR03591;
tigrfam_desc polyribonucleotide nucleotidyltransferase;
tigrfam_mainrole Transcription;
tigrfam_name polynuc_phos;
tigrfam_sub1role Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR03591 evalue:0 score:1025.8 best_domain_score:1025.6 name:TIGR03591;
124237 123488 CDS
ID metaerg.pl|02170
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Marinibacterium;s__Marinibacterium sp003217735;
genomedb_acc GCF_003217735.1;
genomedb_target db:genomedb|GCF_003217735.1|WP_111776376.1 1 245 evalue:1.9e-78 qcov:98.40 identity:61.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF13469; PF09037;
pfam_desc Sulfotransferase family; Stf0 sulphotransferase;
pfam_id Sulfotransfer_3; Sulphotransf;
pfam_target db:Pfam-A.hmm|PF13469.6 evalue:1.3e-07 score:31.5 best_domain_score:18.8 name:Sulfotransfer_3; db:Pfam-A.hmm|PF09037.10 evalue:1.7e-83 score:279.1 best_domain_score:279.0 name:Sulphotransf;
125426 124308 CDS
ID metaerg.pl|02171
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481625.1 1 372 evalue:1.6e-134 qcov:100.00 identity:66.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF18855; PF18845; PF18848; PF18849; PF18851;
pfam_desc Bacterial archaeo-eukaryotic release factor family 11; Bacterial archaeo-eukaryotic release factor family 3; Bacterial archaeo-eukaryotic release factor family 6; Bacterial archaeo-eukaryotic release factor family 7; Bacterial archaeo-eukaryotic release factor family 8;
pfam_id baeRF_family11; baeRF_family3; baeRF_family6; baeRF_family7; baeRF_family8;
pfam_target db:Pfam-A.hmm|PF18855.1 evalue:8.7e-53 score:177.6 best_domain_score:176.8 name:baeRF_family11; db:Pfam-A.hmm|PF18845.1 evalue:1e-24 score:86.9 best_domain_score:85.8 name:baeRF_family3; db:Pfam-A.hmm|PF18848.1 evalue:3.3e-19 score:69.0 best_domain_score:66.8 name:baeRF_family6; db:Pfam-A.hmm|PF18849.1 evalue:2.6e-12 score:46.4 best_domain_score:44.2 name:baeRF_family7; db:Pfam-A.hmm|PF18851.1 evalue:3.6e-47 score:159.2 best_domain_score:158.5 name:baeRF_family8;
125598 126524 CDS
ID metaerg.pl|02172
allgo_ids GO:0016021; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07267.1 1 305 evalue:8.4e-113 qcov:99.00 identity:76.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF03547;
pfam_desc Membrane transport protein;
pfam_id Mem_trans;
pfam_target db:Pfam-A.hmm|PF03547.18 evalue:3.2e-25 score:87.6 best_domain_score:52.1 name:Mem_trans;
tm_num 10;
125598 126524 transmembrane_helix
ID metaerg.pl|02173
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology o125607-125660i125694-125762o125790-125858i125895-125963o125973-126041i126078-126146o126174-126242i126279-126338o126366-126434i126447-126515o;
126702 128627 CDS
ID metaerg.pl|02174
allgo_ids GO:0000902; GO:0005524; GO:0051082; GO:0006457;
allko_ids K04043;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07268.1 1 638 evalue:0.0e+00 qcov:99.50 identity:92.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00012; PF06723;
pfam_desc Hsp70 protein; MreB/Mbl protein;
pfam_id HSP70; MreB_Mbl;
pfam_target db:Pfam-A.hmm|PF00012.20 evalue:2.5e-272 score:903.7 best_domain_score:903.5 name:HSP70; db:Pfam-A.hmm|PF06723.13 evalue:3.3e-17 score:61.5 best_domain_score:55.5 name:MreB_Mbl;
sprot_desc Chaperone protein DnaK;
sprot_id sp|Q3IYM7|DNAK_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IYM7|DNAK_RHOS4 1 638 evalue:0.0e+00 qcov:99.50 identity:89.80;
tigrfam_acc TIGR02350;
tigrfam_desc chaperone protein DnaK;
tigrfam_mainrole Protein fate;
tigrfam_name prok_dnaK;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR02350 evalue:1.7e-292 score:970.3 best_domain_score:970.1 name:TIGR02350;
128700 129860 CDS
ID metaerg.pl|02175
allgo_ids GO:0031072; GO:0051082; GO:0005737; GO:0005524; GO:0008270; GO:0006260; GO:0006457; GO:0009408;
allko_ids K09510; K00428; K03686;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07269.1 1 385 evalue:5.8e-188 qcov:99.70 identity:84.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF00226; PF01556; PF00684;
pfam_desc DnaJ domain; DnaJ C terminal domain; DnaJ central domain;
pfam_id DnaJ; DnaJ_C; DnaJ_CXXCXGXG;
pfam_target db:Pfam-A.hmm|PF00226.31 evalue:1.1e-26 score:92.0 best_domain_score:91.2 name:DnaJ; db:Pfam-A.hmm|PF01556.18 evalue:2.1e-41 score:140.7 best_domain_score:140.4 name:DnaJ_C; db:Pfam-A.hmm|PF00684.19 evalue:2.4e-12 score:46.2 best_domain_score:45.5 name:DnaJ_CXXCXGXG;
sprot_desc Chaperone protein DnaJ;
sprot_id sp|A4WW88|DNAJ_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WW88|DNAJ_RHOS5 1 385 evalue:4.0e-135 qcov:99.70 identity:82.10;
tigrfam_acc TIGR02349;
tigrfam_desc chaperone protein DnaJ;
tigrfam_name DnaJ_bact;
tigrfam_target db:TIGRFAMs.hmm|TIGR02349 evalue:5.9e-131 score:436.2 best_domain_score:436.0 name:TIGR02349;
129937 130740 CDS
ID metaerg.pl|02176
allgo_ids GO:0046872; GO:0008237;
allko_ids K03630;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07270.1 1 267 evalue:7.0e-100 qcov:100.00 identity:71.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF04002;
pfam_desc RadC-like JAB domain;
pfam_id RadC;
pfam_target db:Pfam-A.hmm|PF04002.15 evalue:2.1e-43 score:146.4 best_domain_score:145.9 name:RadC;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|A1B4F1|Y2304_PARDP;
sprot_target db:uniprot_sprot|sp|A1B4F1|Y2304_PARDP 6 267 evalue:1.1e-94 qcov:98.10 identity:68.70;
tigrfam_acc TIGR00608;
tigrfam_desc DNA repair protein RadC;
tigrfam_mainrole DNA metabolism;
tigrfam_name radc;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00608 evalue:4.2e-76 score:254.7 best_domain_score:254.4 name:TIGR00608;
129937 130023 signal_peptide
ID metaerg.pl|02177
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
131877 130882 CDS
ID metaerg.pl|02178
allec_ids 1.3.1.84;
allgo_ids GO:0055114; GO:0005737; GO:0043957;
allko_ids K00001; K19745;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudooceanicola;s__Pseudooceanicola sp002210105;
genomedb_acc GCF_002210105.1;
genomedb_target db:genomedb|GCF_002210105.1|WP_088625557.1 3 331 evalue:1.2e-144 qcov:99.40 identity:78.70;
kegg_pathway_id 00350; 00120; 00071; 00641; 00010; 00624;
kegg_pathway_name Tyrosine metabolism; Bile acid biosynthesis; Fatty acid metabolism; 3-Chloroacrylic acid degradation; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-5789; PWY-5743;
metacyc_pathway_name 3-hydroxypropanoate/4-hydroxybutanate cycle;; 3-hydroxypropanoate cycle;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; Autotrophic-CO2-Fixation;;
pfam_acc PF00107;
pfam_desc Zinc-binding dehydrogenase;
pfam_id ADH_zinc_N;
pfam_target db:Pfam-A.hmm|PF00107.26 evalue:1.4e-12 score:47.0 best_domain_score:46.2 name:ADH_zinc_N;
sprot_desc Acrylyl-CoA reductase AcuI;
sprot_id sp|Q5LS56|ACUI_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LS56|ACUI_RUEPO 3 331 evalue:4.8e-137 qcov:99.40 identity:75.20;
tigrfam_acc TIGR02823;
tigrfam_desc putative quinone oxidoreductase, YhdH/YhfP family;
tigrfam_mainrole Unknown function;
tigrfam_name oxido_YhdH;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR02823 evalue:4e-133 score:442.4 best_domain_score:442.2 name:TIGR02823;
tm_num 3;
131877 130882 transmembrane_helix
ID metaerg.pl|02179
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i131254-131307o131335-131403i131596-131664o;
132500 132000 CDS
ID metaerg.pl|02180
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068300515.1 6 155 evalue:2.0e-44 qcov:90.40 identity:65.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01047; PF12802;
pfam_desc MarR family; MarR family;
pfam_id MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF01047.22 evalue:2e-09 score:36.5 best_domain_score:35.2 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:2.1e-08 score:33.1 best_domain_score:32.1 name:MarR_2;
132586 133620 CDS
ID metaerg.pl|02181
allec_ids 1.13.11.4;
allgo_ids GO:0006355; GO:0047922; GO:0019439;
allko_ids K00971; K00450;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068300513.1 4 344 evalue:3.0e-167 qcov:99.10 identity:81.80;
kegg_pathway_id 00350; 00051;
kegg_pathway_name Tyrosine metabolism; Fructose and mannose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-6223;
metacyc_pathway_name gentisate degradation I;;
metacyc_pathway_type Gentisate-Degradation;;
pfam_acc PF02311; PF07883;
pfam_desc AraC-like ligand binding domain; Cupin domain;
pfam_id AraC_binding; Cupin_2;
pfam_target db:Pfam-A.hmm|PF02311.19 evalue:7.9e-06 score:25.0 best_domain_score:19.6 name:AraC_binding; db:Pfam-A.hmm|PF07883.11 evalue:6.2e-25 score:86.0 best_domain_score:68.8 name:Cupin_2;
sprot_desc Gentisate 1,2-dioxygenase;
sprot_id sp|O86041|GNTDO_RALSP;
sprot_target db:uniprot_sprot|sp|O86041|GNTDO_RALSP 1 342 evalue:2.3e-94 qcov:99.40 identity:51.90;
133617 134315 CDS
ID metaerg.pl|02182
allec_ids 3.7.1.20;
allgo_ids GO:0003824; GO:0034545; GO:0016823; GO:0046872; GO:0019439;
allko_ids K16165;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodosalinus;s__Rhodosalinus sp003298775;
genomedb_acc GCA_003298775.1;
genomedb_target db:genomedb|GCA_003298775.1|RBI85429.1 1 232 evalue:1.7e-94 qcov:100.00 identity:74.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01557;
pfam_desc Fumarylacetoacetate (FAA) hydrolase family;
pfam_id FAA_hydrolase;
pfam_target db:Pfam-A.hmm|PF01557.18 evalue:1.2e-47 score:161.7 best_domain_score:161.4 name:FAA_hydrolase;
sprot_desc Fumarylpyruvate hydrolase;
sprot_id sp|O86042|NAGK_RALSP;
sprot_target db:uniprot_sprot|sp|O86042|NAGK_RALSP 44 232 evalue:6.3e-51 qcov:81.50 identity:54.20;
134312 135523 CDS
ID metaerg.pl|02183
allec_ids 1.14.13.24;
allgo_ids GO:0016491; GO:0055114; GO:0018669; GO:0071949; GO:0019439;
allko_ids K00480;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Aestuariivita;s__Aestuariivita boseongensis;
genomedb_acc GCF_001262635.1;
genomedb_target db:genomedb|GCF_001262635.1|WP_050931786.1 1 403 evalue:4.5e-191 qcov:100.00 identity:81.10;
kegg_pathway_id 00626; 00624;
kegg_pathway_name Naphthalene and anthracene degradation; 1- and 2-Methylnaphthalene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id M-CRESOL-DEGRADATION-PWY; PWY-6228;
metacyc_pathway_name m-cresol degradation;; 3-chlorobenzoate degradation III (via gentisate);;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;; 3-Chlorobenzoate-Degradation;;
pfam_acc PF01266; PF01494;
pfam_desc FAD dependent oxidoreductase; FAD binding domain;
pfam_id DAO; FAD_binding_3;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:1e-07 score:31.1 best_domain_score:27.6 name:DAO; db:Pfam-A.hmm|PF01494.19 evalue:2.3e-25 score:88.8 best_domain_score:88.2 name:FAD_binding_3;
sprot_desc 3-hydroxybenzoate 6-hydroxylase 1;
sprot_id sp|Q9F131|3HBH1_PSEAC;
sprot_target db:uniprot_sprot|sp|Q9F131|3HBH1_PSEAC 1 387 evalue:3.7e-123 qcov:96.00 identity:55.80;
tm_num 1;
134312 135523 transmembrane_helix
ID metaerg.pl|02184
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i134324-134377o;
135965 135552 CDS
ID metaerg.pl|02185
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sediminimonas;s__Sediminimonas qiaohouensis;
genomedb_acc GCF_000423645.1;
genomedb_target db:genomedb|GCF_000423645.1|WP_026758504.1 13 135 evalue:9.7e-29 qcov:89.80 identity:53.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF03061;
pfam_desc Thioesterase superfamily;
pfam_id 4HBT;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:2.1e-05 score:24.0 best_domain_score:23.3 name:4HBT;
tigrfam_acc TIGR00369;
tigrfam_desc uncharacterized domain 1;
tigrfam_name unchar_dom_1;
tigrfam_target db:TIGRFAMs.hmm|TIGR00369 evalue:8.3e-15 score:54.1 best_domain_score:53.9 name:TIGR00369;
136786 136037 CDS
ID metaerg.pl|02186
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07446.1 12 241 evalue:7.6e-72 qcov:92.40 identity:62.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
sp YES;
tm_num 8;
136037 136138 signal_peptide
ID metaerg.pl|02187
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
136786 136037 transmembrane_helix
ID metaerg.pl|02188
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i136073-136141o136211-136279i136316-136369o136379-136447i136484-136552o136565-136618i136637-136696o136709-136762i;
137918 136779 CDS
ID metaerg.pl|02189
allec_ids 1.1.5.-;
allgo_ids GO:0009279; GO:0030288; GO:0005509; GO:0016901; GO:0070968;
allko_ids K21430;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797537.1 1 377 evalue:3.1e-149 qcov:99.50 identity:66.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF07995;
pfam_desc Glucose / Sorbosone dehydrogenase;
pfam_id GSDH;
pfam_target db:Pfam-A.hmm|PF07995.11 evalue:2.7e-103 score:345.0 best_domain_score:344.8 name:GSDH;
sp YES;
sprot_desc Aldose sugar dehydrogenase YliI;
sprot_id sp|P75804|YLII_ECOLI;
sprot_target db:uniprot_sprot|sp|P75804|YLII_ECOLI 27 379 evalue:1.2e-70 qcov:93.10 identity:40.80;
136779 136844 signal_peptide
ID metaerg.pl|02190
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
138899 138120 CDS
ID metaerg.pl|02191
allec_ids 1.3.5.1;
allgo_ids GO:0009055; GO:0051536; GO:0051537; GO:0051538; GO:0051539; GO:0046872; GO:0008177; GO:0006099;
allko_ids K00125; K00240; K00246; K03390; K00122; K00245; K00235;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481223.1 1 259 evalue:2.7e-149 qcov:100.00 identity:92.70;
kegg_pathway_id 00020; 00632; 00720; 00680; 00650; 00790; 00190; 00630; 05012; 02020;
kegg_pathway_name Citrate cycle (TCA cycle); Benzoate degradation via CoA ligation; Reductive carboxylate cycle (CO2 fixation); Methane metabolism; Butanoate metabolism; Folate biosynthesis; Oxidative phosphorylation; Glyoxylate and dicarboxylate metabolism; Parkinson's disease; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY0-1329; PWY-3781; PWY-5690; TCA-GLYOX-BYPASS; TCA; PWY-561; PWY-5913; PWY-5464; PWY-4302; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY0-1353;
metacyc_pathway_name succinate to cytochrome bo oxidase electron transfer;; aerobic respiration I (cytochrome c);; TCA cycle II (plants and fungi);; superpathway of glyoxylate bypass and TCA;; TCA cycle I (prokaryotic);; superpathway of glyoxylate cycle and fatty acid degradation;; partial TCA cycle (obligate autotrophs);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; aerobic respiration III (alternative oxidase pathway);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; succinate to cytochrome bd oxidase electron transfer;;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; AEROBIC-RESPIRATION; Electron-Transfer;; TCA-VARIANTS;; Super-Pathways; TCA-VARIANTS;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; AEROBIC-RESPIRATION; Electron-Transfer;; Energy-Metabolism; Super-Pathways;; AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF13085; PF13237; PF13534; PF13183;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id Fer2_3; Fer4_10; Fer4_17; Fer4_8;
pfam_target db:Pfam-A.hmm|PF13085.6 evalue:4.6e-32 score:109.5 best_domain_score:108.7 name:Fer2_3; db:Pfam-A.hmm|PF13237.6 evalue:3.9e-08 score:32.5 best_domain_score:32.5 name:Fer4_10; db:Pfam-A.hmm|PF13534.6 evalue:3.4e-09 score:36.3 best_domain_score:36.3 name:Fer4_17; db:Pfam-A.hmm|PF13183.6 evalue:4.5e-10 score:39.1 best_domain_score:20.2 name:Fer4_8;
sprot_desc Succinate dehydrogenase iron-sulfur subunit;
sprot_id sp|Q59662|SDHB_PARDE;
sprot_target db:uniprot_sprot|sp|Q59662|SDHB_PARDE 1 259 evalue:6.2e-140 qcov:100.00 identity:86.10;
tigrfam_acc TIGR00384;
tigrfam_desc succinate dehydrogenase and fumarate reductase iron-sulfur protein;
tigrfam_mainrole Energy metabolism;
tigrfam_name dhsB;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR00384 evalue:1.1e-81 score:272.6 best_domain_score:272.4 name:TIGR00384;
139222 138911 CDS
ID metaerg.pl|02192
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470794.1 1 102 evalue:4.7e-28 qcov:99.00 identity:66.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
sp YES;
138911 138952 lipoprotein_signal_peptide
ID metaerg.pl|02193
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
141065 139260 CDS
ID metaerg.pl|02194
allec_ids 1.3.5.1;
allgo_ids GO:0016491; GO:0055114; GO:0005886; GO:0050660; GO:0008177; GO:0022900; GO:0006099;
allko_ids K00234; K00244; K00239; K00394; K00278;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07029.1 1 601 evalue:0.0e+00 qcov:100.00 identity:89.50;
kegg_pathway_id 00632; 00020; 00720; 00920; 05012; 00190; 00650; 00252; 02020; 00450; 00760;
kegg_pathway_name Benzoate degradation via CoA ligation; Citrate cycle (TCA cycle); Reductive carboxylate cycle (CO2 fixation); Sulfur metabolism; Parkinson's disease; Oxidative phosphorylation; Butanoate metabolism; Alanine and aspartate metabolism; Two-component system - General; Selenoamino acid metabolism; Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY0-1329; PWY-3781; PWY-5690; TCA-GLYOX-BYPASS; PWY-561; TCA; PWY-4302; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY0-1353; PWY-5464; PWY-5913;
metacyc_pathway_name succinate to cytochrome bo oxidase electron transfer;; aerobic respiration I (cytochrome c);; TCA cycle II (plants and fungi);; superpathway of glyoxylate bypass and TCA;; superpathway of glyoxylate cycle and fatty acid degradation;; TCA cycle I (prokaryotic);; aerobic respiration III (alternative oxidase pathway);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; succinate to cytochrome bd oxidase electron transfer;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; partial TCA cycle (obligate autotrophs);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; AEROBIC-RESPIRATION; Electron-Transfer;; TCA-VARIANTS;; Super-Pathways; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; TCA-VARIANTS;; AEROBIC-RESPIRATION; Electron-Transfer;; Energy-Metabolism; Super-Pathways;; AEROBIC-RESPIRATION; Electron-Transfer;; Energy-Metabolism; Super-Pathways;; TCA-VARIANTS;;
pfam_acc PF00890; PF01134; PF07992; PF02910;
pfam_desc FAD binding domain; Glucose inhibited division protein A; Pyridine nucleotide-disulphide oxidoreductase; Fumarate reductase flavoprotein C-term;
pfam_id FAD_binding_2; GIDA; Pyr_redox_2; Succ_DH_flav_C;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:5.3e-124 score:413.7 best_domain_score:413.3 name:FAD_binding_2; db:Pfam-A.hmm|PF01134.22 evalue:7.1e-07 score:27.9 best_domain_score:13.8 name:GIDA; db:Pfam-A.hmm|PF07992.14 evalue:2e-06 score:26.5 best_domain_score:22.7 name:Pyr_redox_2; db:Pfam-A.hmm|PF02910.20 evalue:8.5e-43 score:144.6 best_domain_score:144.0 name:Succ_DH_flav_C;
sprot_desc Succinate dehydrogenase flavoprotein subunit;
sprot_id sp|Q59661|SDHA_PARDE;
sprot_target db:uniprot_sprot|sp|Q59661|SDHA_PARDE 1 601 evalue:1.6e-300 qcov:100.00 identity:83.40;
tigrfam_acc TIGR01812; TIGR01816;
tigrfam_desc succinate dehydrogenase or fumarate reductase, flavoprotein subunit; succinate dehydrogenase, flavoprotein subunit;
tigrfam_mainrole Energy metabolism; Energy metabolism;
tigrfam_name sdhA_frdA_Gneg; sdhA_forward;
tigrfam_sub1role TCA cycle; TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01812 evalue:1.7e-236 score:785.3 best_domain_score:785.2 name:TIGR01812; db:TIGRFAMs.hmm|TIGR01816 evalue:8.2e-284 score:941.3 best_domain_score:941.2 name:TIGR01816;
141459 141079 CDS
ID metaerg.pl|02195
allgo_ids GO:0016627;
allko_ids K00242;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07030.1 1 126 evalue:3.5e-49 qcov:100.00 identity:75.40;
kegg_pathway_id 00632; 00020; 00190; 00650; 00720;
kegg_pathway_name Benzoate degradation via CoA ligation; Citrate cycle (TCA cycle); Oxidative phosphorylation; Butanoate metabolism; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF05328; PF01127;
pfam_desc CybS, succinate dehydrogenase cytochrome B small subunit; Succinate dehydrogenase/Fumarate reductase transmembrane subunit;
pfam_id CybS; Sdh_cyt;
pfam_target db:Pfam-A.hmm|PF05328.12 evalue:1.3e-05 score:24.1 best_domain_score:22.7 name:CybS; db:Pfam-A.hmm|PF01127.22 evalue:9.3e-13 score:47.5 best_domain_score:47.3 name:Sdh_cyt;
tigrfam_acc TIGR02968;
tigrfam_desc succinate dehydrogenase, hydrophobic membrane anchor protein;
tigrfam_mainrole Energy metabolism;
tigrfam_name succ_dehyd_anc;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR02968 evalue:2.6e-20 score:71.8 best_domain_score:71.5 name:TIGR02968;
tm_num 3;
141459 141079 transmembrane_helix
ID metaerg.pl|02196
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i141160-141228o141241-141309i141370-141438o;
141854 141471 CDS
ID metaerg.pl|02197
allgo_ids GO:0016627; GO:0016021; GO:0005886; GO:0045281; GO:0009055; GO:0046872; GO:0000104; GO:0006099;
allko_ids K00241;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07031.1 1 125 evalue:3.3e-47 qcov:98.40 identity:73.60;
kegg_pathway_id 00720; 00020; 00190; 00632; 00650;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Citrate cycle (TCA cycle); Oxidative phosphorylation; Benzoate degradation via CoA ligation; Butanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01127;
pfam_desc Succinate dehydrogenase/Fumarate reductase transmembrane subunit;
pfam_id Sdh_cyt;
pfam_target db:Pfam-A.hmm|PF01127.22 evalue:1.5e-30 score:104.9 best_domain_score:104.8 name:Sdh_cyt;
sprot_desc Succinate dehydrogenase cytochrome b556 subunit;
sprot_id sp|Q59659|DHSC_PARDE;
sprot_target db:uniprot_sprot|sp|Q59659|DHSC_PARDE 1 126 evalue:1.1e-33 qcov:99.20 identity:57.10;
tigrfam_acc TIGR02970;
tigrfam_desc succinate dehydrogenase, cytochrome b556 subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name succ_dehyd_cytB;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR02970 evalue:8.3e-37 score:125.2 best_domain_score:125.1 name:TIGR02970;
tm_num 3;
141854 141471 transmembrane_helix
ID metaerg.pl|02198
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology i141549-141617o141660-141728i141789-141848o;
143132 142095 CDS
ID metaerg.pl|02199
allec_ids 4.2.1.148;
allgo_ids GO:0016833; GO:0045733;
allko_ids K14449;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Nioella;s__Nioella sp002783145;
genomedb_acc GCA_002783145.1;
genomedb_target db:genomedb|GCA_002783145.1|PIV73595.1 2 344 evalue:2.0e-163 qcov:99.40 identity:81.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF01575;
pfam_desc MaoC like domain;
pfam_id MaoC_dehydratas;
pfam_target db:Pfam-A.hmm|PF01575.19 evalue:1e-06 score:27.5 best_domain_score:16.9 name:MaoC_dehydratas;
sprot_desc Mesaconyl-CoA hydratase;
sprot_id sp|Q3IZ78|MCH_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IZ78|MCH_RHOS4 1 344 evalue:8.5e-153 qcov:99.70 identity:75.70;
143439 143236 CDS
ID metaerg.pl|02200
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Confluentimicrobium;s__Confluentimicrobium sp001305615;
genomedb_acc GCF_001305615.1;
genomedb_target db:genomedb|GCF_001305615.1|WP_037209631.1 1 66 evalue:7.8e-24 qcov:98.50 identity:81.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF08410;
pfam_desc Domain of unknown function (DUF1737);
pfam_id DUF1737;
pfam_target db:Pfam-A.hmm|PF08410.10 evalue:3.3e-29 score:99.7 best_domain_score:99.5 name:DUF1737;
143995 143444 CDS
ID metaerg.pl|02201
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07034.1 1 183 evalue:1.2e-66 qcov:100.00 identity:70.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF07298;
pfam_desc NnrU protein;
pfam_id NnrU;
pfam_target db:Pfam-A.hmm|PF07298.11 evalue:1.2e-39 score:135.3 best_domain_score:135.1 name:NnrU;
tm_num 5;
143995 143444 transmembrane_helix
ID metaerg.pl|02202
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
topology o143453-143512i143549-143602o143630-143698i143789-143857o143915-143983i;
144869 143997 CDS
ID metaerg.pl|02203
allec_ids 3.1.2.30;
allgo_ids GO:0003824; GO:0016787; GO:0046872;
allko_ids K14451;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07035.1 1 290 evalue:1.9e-127 qcov:100.00 identity:81.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
pfam_acc PF15617; PF03328;
pfam_desc C-C_Bond_Lyase of the TIM-Barrel fold; HpcH/HpaI aldolase/citrate lyase family;
pfam_id C-C_Bond_Lyase; HpcH_HpaI;
pfam_target db:Pfam-A.hmm|PF15617.6 evalue:6e-09 score:34.7 best_domain_score:21.1 name:C-C_Bond_Lyase; db:Pfam-A.hmm|PF03328.14 evalue:3.6e-49 score:166.1 best_domain_score:165.7 name:HpcH_HpaI;
sprot_desc (3S)-malyl-CoA thioesterase;
sprot_id sp|A3PN16|MCTE_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PN16|MCTE_RHOS1 2 283 evalue:6.1e-104 qcov:97.20 identity:69.90;
145070 145375 CDS
ID metaerg.pl|02204
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE45563.1 15 100 evalue:1.4e-24 qcov:85.10 identity:66.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
sp YES;
145070 145135 signal_peptide
ID metaerg.pl|02205
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
145475 146437 CDS
ID metaerg.pl|02206
allec_ids 1.1.1.37;
allgo_ids GO:0016616; GO:0055114; GO:0030060; GO:0005975; GO:0019752; GO:0006099;
allko_ids K00025; K00026; K00024; K00016;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07036.1 1 320 evalue:1.4e-166 qcov:100.00 identity:90.90;
kegg_pathway_id 00630; 00640; 00620; 00272; 00020; 00720; 00010; 00710;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Propanoate metabolism; Pyruvate metabolism; Cysteine metabolism; Citrate cycle (TCA cycle); Reductive carboxylate cycle (CO2 fixation); Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.51738; 30.9288; 0.841313; 0.0280642; 26.5421;
metacyc_pathway_id PWY-5913; P42-PWY; P108-PWY; TCA; GLUCONEO-PWY; TCA-GLYOX-BYPASS; ANARESP1-PWY; PWY-5690; P105-PWY; PWY-6146; P23-PWY; PWY-5464; MALATE-ASPARTATE-SHUTTLE-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-561; PWY-1622; PWY-5392; FERMENTATION-PWY; GLYOXYLATE-BYPASS;
metacyc_pathway_name partial TCA cycle (obligate autotrophs);; incomplete reductive TCA cycle;; pyruvate fermentation to propanoate I;; TCA cycle I (prokaryotic);; gluconeogenesis I;; superpathway of glyoxylate bypass and TCA;; ; TCA cycle II (plants and fungi);; TCA cycle IV (2-oxoglutarate decarboxylase);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; reductive TCA cycle I;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; L-aspartate degradation II;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; superpathway of glyoxylate cycle and fatty acid degradation;; formaldehyde assimilation I (serine pathway);; reductive TCA cycle II;; mixed acid fermentation;; glyoxylate cycle;;
metacyc_pathway_type TCA-VARIANTS;; Reductive-TCA-Cycles;; Pyruvate-Propanoate-Fermentation;; TCA-VARIANTS;; Gluconeogenesis;; Super-Pathways; TCA-VARIANTS;; ; TCA-VARIANTS;; TCA-VARIANTS;; Biosynthesis; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; ASPARTATE-DEG;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Formaldehyde-Assimilation;; Reductive-TCA-Cycles;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism;;
pfam_acc PF02866; PF00056;
pfam_desc lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain;
pfam_id Ldh_1_C; Ldh_1_N;
pfam_target db:Pfam-A.hmm|PF02866.18 evalue:3.4e-24 score:84.9 best_domain_score:84.5 name:Ldh_1_C; db:Pfam-A.hmm|PF00056.23 evalue:1.1e-36 score:125.3 best_domain_score:124.7 name:Ldh_1_N;
sprot_desc Malate dehydrogenase;
sprot_id sp|A4WNM7|MDH_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WNM7|MDH_RHOS5 1 320 evalue:3.5e-161 qcov:100.00 identity:86.60;
tigrfam_acc TIGR01763;
tigrfam_desc malate dehydrogenase, NAD-dependent;
tigrfam_mainrole Energy metabolism;
tigrfam_name MalateDH_bact;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01763 evalue:1.3e-124 score:414.5 best_domain_score:414.3 name:TIGR01763;
>Feature NODE_10_length_136080_cov_23.017
595 1713 CDS
ID metaerg.pl|02207
allec_ids 2.1.1.192;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0070040; GO:0019843; GO:0002935; GO:0000049; GO:0070475;
allko_ids K06941;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC07995.1 9 356 evalue:2.4e-138 qcov:93.50 identity:69.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF04055;
pfam_desc Radical SAM superfamily;
pfam_id Radical_SAM;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:1e-18 score:67.5 best_domain_score:66.7 name:Radical_SAM;
sprot_desc Probable dual-specificity RNA methyltransferase RlmN;
sprot_id sp|C1A949|RLMN_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A949|RLMN_GEMAT 8 351 evalue:8.1e-85 qcov:92.50 identity:51.20;
tigrfam_acc TIGR00048;
tigrfam_desc 23S rRNA (adenine(2503)-C(2))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name rRNA_mod_RlmN;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00048 evalue:1.5e-107 score:358.8 best_domain_score:358.4 name:TIGR00048;
3158 1746 CDS
ID metaerg.pl|02208
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter halophilus;
genomedb_acc GCF_001715195.1;
genomedb_target db:genomedb|GCF_001715195.1|WP_069130962.1 44 463 evalue:2.7e-131 qcov:89.40 identity:54.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:8.5e-10 score:37.7 best_domain_score:37.0 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:1.5e-07 score:30.5 best_domain_score:24.1 name:Amidohydro_3;
sp YES;
tm_num 1;
1746 1913 signal_peptide
ID metaerg.pl|02209
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
3158 1746 transmembrane_helix
ID metaerg.pl|02210
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i1857-1925o;
6157 3155 CDS
ID metaerg.pl|02211
allgo_ids GO:0016787;
allko_ids K01468;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter sp001564065;
genomedb_acc GCA_001564065.1;
genomedb_target db:genomedb|GCA_001564065.1|LKNA01000036.1_4 1 994 evalue:0.0e+00 qcov:99.40 identity:55.80;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:5.5e-28 score:97.5 best_domain_score:48.3 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:5.6e-29 score:101.2 best_domain_score:49.4 name:Amidohydro_3;
sp YES;
tm_num 1;
3155 3223 signal_peptide
ID metaerg.pl|02212
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
6157 3155 transmembrane_helix
ID metaerg.pl|02213
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i3173-3241o;
7055 6237 CDS
ID metaerg.pl|02214
allec_ids 3.4.21.89;
allgo_ids GO:0005887; GO:0008233; GO:0004252; GO:0006465;
allko_ids K03100;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000029.1_42 52 271 evalue:1.0e-77 qcov:80.90 identity:62.90;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF00717; PF10502;
pfam_desc Peptidase S24-like; Signal peptidase, peptidase S26;
pfam_id Peptidase_S24; Peptidase_S26;
pfam_target db:Pfam-A.hmm|PF00717.23 evalue:7e-12 score:44.4 best_domain_score:43.7 name:Peptidase_S24; db:Pfam-A.hmm|PF10502.9 evalue:1.2e-08 score:34.0 best_domain_score:20.1 name:Peptidase_S26;
sprot_desc Signal peptidase I;
sprot_id sp|Q9I5G7|LEP_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I5G7|LEP_PSEAE 52 248 evalue:8.2e-26 qcov:72.40 identity:36.20;
tigrfam_acc TIGR02227;
tigrfam_desc signal peptidase I;
tigrfam_mainrole Protein fate;
tigrfam_name sigpep_I_bact;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02227 evalue:3.2e-41 score:140.1 best_domain_score:139.7 name:TIGR02227;
tm_num 1;
7055 6237 transmembrane_helix
ID metaerg.pl|02215
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i6405-6473o;
7601 7068 CDS
ID metaerg.pl|02216
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF13399;
pfam_desc LytR cell envelope-related transcriptional attenuator;
pfam_id LytR_C;
pfam_target db:Pfam-A.hmm|PF13399.6 evalue:1.1e-18 score:67.2 best_domain_score:66.9 name:LytR_C;
tm_num 1;
7601 7068 transmembrane_helix
ID metaerg.pl|02217
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i7125-7193o;
7664 8308 CDS
ID metaerg.pl|02218
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
9162 8197 CDS
ID metaerg.pl|02219
allec_ids 6.3.2.1;
allgo_ids GO:0004592; GO:0015940; GO:0005737; GO:0005524;
allko_ids K01918; K13799; K00945;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__HRBIN33;s__HRBIN33 sp002923375;
genomedb_acc GCA_002923375.1;
genomedb_target db:genomedb|GCA_002923375.1|GBD33132.1 36 320 evalue:1.2e-74 qcov:88.80 identity:55.10;
kegg_pathway_id 00240; 00410; 00770;
kegg_pathway_name Pyrimidine metabolism; beta-Alanine metabolism; Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PANTO-PWY; PWY-3961; PWY-4242; PANTOSYN-PWY; PWY-4221;
metacyc_pathway_name phosphopantothenate biosynthesis I;; phosphopantothenate biosynthesis II;; ; superpathway of coenzyme A biosynthesis I (bacteria);; superpathway of coenzyme A biosynthesis II (plants);;
metacyc_pathway_type Pantothenate-Biosynthesis;; Pantothenate-Biosynthesis;; ; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;;
pfam_acc PF02569;
pfam_desc Pantoate-beta-alanine ligase;
pfam_id Pantoate_ligase;
pfam_target db:Pfam-A.hmm|PF02569.15 evalue:1.5e-90 score:302.2 best_domain_score:302.1 name:Pantoate_ligase;
sprot_desc Pantothenate synthetase;
sprot_id sp|A1SDW7|PANC_NOCSJ;
sprot_target db:uniprot_sprot|sp|A1SDW7|PANC_NOCSJ 21 320 evalue:1.3e-67 qcov:93.50 identity:51.90;
tigrfam_acc TIGR00018; TIGR00125;
tigrfam_desc pantoate--beta-alanine ligase; cytidyltransferase-like domain;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name panC; cyt_tran_rel;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00018 evalue:6.5e-88 score:293.5 best_domain_score:293.3 name:TIGR00018; db:TIGRFAMs.hmm|TIGR00125 evalue:1e-09 score:37.6 best_domain_score:36.3 name:TIGR00125;
9944 9159 CDS
ID metaerg.pl|02220
allec_ids 2.1.2.11;
allgo_ids GO:0003864; GO:0015940; GO:0005737; GO:0046872;
allko_ids K00606;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000001.1_79 1 258 evalue:8.4e-90 qcov:98.90 identity:67.10;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PANTO-PWY; PWY-4221; PANTOSYN-PWY;
metacyc_pathway_name phosphopantothenate biosynthesis I;; superpathway of coenzyme A biosynthesis II (plants);; superpathway of coenzyme A biosynthesis I (bacteria);;
metacyc_pathway_type Pantothenate-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;;
pfam_acc PF02548;
pfam_desc Ketopantoate hydroxymethyltransferase;
pfam_id Pantoate_transf;
pfam_target db:Pfam-A.hmm|PF02548.15 evalue:1.8e-106 score:354.5 best_domain_score:354.4 name:Pantoate_transf;
sprot_desc 3-methyl-2-oxobutanoate hydroxymethyltransferase;
sprot_id sp|Q2LTJ5|PANB_SYNAS;
sprot_target db:uniprot_sprot|sp|Q2LTJ5|PANB_SYNAS 1 255 evalue:4.0e-78 qcov:97.70 identity:56.10;
tigrfam_acc TIGR00222;
tigrfam_desc 3-methyl-2-oxobutanoate hydroxymethyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name panB;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00222 evalue:6.2e-97 score:323.4 best_domain_score:323.2 name:TIGR00222;
10170 11834 CDS
ID metaerg.pl|02221
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC07999.1 1 549 evalue:1.8e-102 qcov:99.10 identity:43.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF05833; PF05670;
pfam_desc Fibronectin-binding protein A N-terminus (FbpA); NFACT protein RNA binding domain;
pfam_id FbpA; NFACT-R_1;
pfam_target db:Pfam-A.hmm|PF05833.11 evalue:1e-17 score:63.3 best_domain_score:51.5 name:FbpA; db:Pfam-A.hmm|PF05670.13 evalue:2.6e-11 score:43.3 best_domain_score:42.6 name:NFACT-R_1;
12690 11815 CDS
ID metaerg.pl|02222
allec_ids 4.2.1.20;
allgo_ids GO:0004834; GO:0006568;
allko_ids K01694; K01817; K06001; K01695; K01696;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000098.1_28 17 272 evalue:1.3e-86 qcov:88.00 identity:65.60;
kegg_pathway_id 00400; 02020;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id TRPSYN-PWY; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00290;
pfam_desc Tryptophan synthase alpha chain;
pfam_id Trp_syntA;
pfam_target db:Pfam-A.hmm|PF00290.20 evalue:1.1e-84 score:282.5 best_domain_score:282.3 name:Trp_syntA;
sprot_desc Tryptophan synthase alpha chain;
sprot_id sp|A6UX98|TRPA_PSEA7;
sprot_target db:uniprot_sprot|sp|A6UX98|TRPA_PSEA7 29 259 evalue:7.8e-59 qcov:79.40 identity:51.30;
tigrfam_acc TIGR00262;
tigrfam_desc tryptophan synthase, alpha subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpA;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00262 evalue:1.3e-73 score:246.2 best_domain_score:245.9 name:TIGR00262;
14164 12740 CDS
ID metaerg.pl|02223
allko_ids K01120;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_53 10 474 evalue:2.3e-170 qcov:98.10 identity:62.40;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01966;
pfam_desc HD domain;
pfam_id HD;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:9.8e-09 score:34.7 best_domain_score:34.0 name:HD;
15969 14161 CDS
ID metaerg.pl|02224
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_52 17 594 evalue:2.5e-121 qcov:96.00 identity:44.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF13646;
pfam_desc HEAT repeats;
pfam_id HEAT_2;
pfam_target db:Pfam-A.hmm|PF13646.6 evalue:2.1e-19 score:68.9 best_domain_score:30.2 name:HEAT_2;
17270 16047 CDS
ID metaerg.pl|02225
allec_ids 4.2.1.20;
allgo_ids GO:0005737; GO:0004834; GO:0000162;
allko_ids K01694; K01817; K06001; K01695; K01696;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2982;s__UBA2982 sp002347035;
genomedb_acc GCA_002347035.1;
genomedb_target db:genomedb|GCA_002347035.1|DEAM01000019.1_102 9 407 evalue:9.2e-176 qcov:98.00 identity:77.70;
kegg_pathway_id 00400; 02020;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id TRPSYN-PWY; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:4e-45 score:153.7 best_domain_score:153.4 name:PALP;
sprot_desc Tryptophan synthase beta chain;
sprot_id sp|Q7NGX9|TRPB_GLOVI;
sprot_target db:uniprot_sprot|sp|Q7NGX9|TRPB_GLOVI 18 404 evalue:3.9e-149 qcov:95.10 identity:67.20;
tigrfam_acc TIGR00263;
tigrfam_desc tryptophan synthase, beta subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpB;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00263 evalue:5.1e-187 score:620.8 best_domain_score:620.6 name:TIGR00263;
18072 17332 CDS
ID metaerg.pl|02226
allec_ids 5.3.1.24;
allgo_ids GO:0004640; GO:0006568; GO:0000162;
allko_ids K01817;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV24888.1 23 225 evalue:1.9e-43 qcov:82.50 identity:47.30;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id TRPSYN-PWY; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00697;
pfam_desc N-(5'phosphoribosyl)anthranilate (PRA) isomerase;
pfam_id PRAI;
pfam_target db:Pfam-A.hmm|PF00697.22 evalue:1.5e-33 score:115.4 best_domain_score:115.3 name:PRAI;
sprot_desc N-(5'-phosphoribosyl)anthranilate isomerase;
sprot_id sp|Q8DGP3|TRPF_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DGP3|TRPF_THEEB 18 227 evalue:3.5e-28 qcov:85.40 identity:38.50;
18986 18069 CDS
ID metaerg.pl|02227
allec_ids 4.1.1.48;
allgo_ids GO:0016491; GO:0004425; GO:0000162;
allko_ids K01609; K13498; K01817;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_49 40 294 evalue:1.8e-67 qcov:83.60 identity:58.40;
kegg_pathway_id 00400; 02020;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY; TRPSYN-PWY;
metacyc_pathway_name superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;; L-tryptophan biosynthesis;;
metacyc_pathway_type Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; TRYPTOPHAN-BIOSYNTHESIS;;
pfam_acc PF01070; PF00218; PF01729;
pfam_desc FMN-dependent dehydrogenase; Indole-3-glycerol phosphate synthase; Quinolinate phosphoribosyl transferase, C-terminal domain;
pfam_id FMN_dh; IGPS; QRPTase_C;
pfam_target db:Pfam-A.hmm|PF01070.18 evalue:1.1e-07 score:30.4 best_domain_score:29.8 name:FMN_dh; db:Pfam-A.hmm|PF00218.21 evalue:4.1e-84 score:281.0 best_domain_score:280.8 name:IGPS; db:Pfam-A.hmm|PF01729.19 evalue:8.6e-06 score:24.9 best_domain_score:24.2 name:QRPTase_C;
sprot_desc Indole-3-glycerol phosphate synthase;
sprot_id sp|B1MBV4|TRPC_MYCA9;
sprot_target db:uniprot_sprot|sp|B1MBV4|TRPC_MYCA9 42 293 evalue:8.0e-54 qcov:82.60 identity:50.00;
19127 19735 CDS
ID metaerg.pl|02228
allec_ids 3.4.21.88;
allgo_ids GO:0004252; GO:0006508; GO:0003677; GO:0006281; GO:0006260; GO:0045892; GO:0009432;
allko_ids K01356;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_48 1 202 evalue:6.3e-77 qcov:100.00 identity:73.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01726; PF00717;
pfam_desc LexA DNA binding domain; Peptidase S24-like;
pfam_id LexA_DNA_bind; Peptidase_S24;
pfam_target db:Pfam-A.hmm|PF01726.16 evalue:5.5e-21 score:73.3 best_domain_score:72.7 name:LexA_DNA_bind; db:Pfam-A.hmm|PF00717.23 evalue:6.3e-16 score:57.3 best_domain_score:56.7 name:Peptidase_S24;
sprot_desc LexA repressor;
sprot_id sp|Q1IU64|LEXA_KORVE;
sprot_target db:uniprot_sprot|sp|Q1IU64|LEXA_KORVE 3 202 evalue:3.2e-43 qcov:99.00 identity:45.70;
tigrfam_acc TIGR00498;
tigrfam_desc repressor LexA;
tigrfam_mainrole Regulatory functions;
tigrfam_name lexA;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00498 evalue:4.8e-61 score:205.1 best_domain_score:204.9 name:TIGR00498;
19763 20026 CDS
ID metaerg.pl|02229
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
21054 20011 CDS
ID metaerg.pl|02230
allec_ids 2.4.2.18;
allgo_ids GO:0016757; GO:0004048; GO:0000287; GO:0000162;
allko_ids K00766; K00758; K13497; K01658;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV24885.1 2 342 evalue:5.5e-105 qcov:98.30 identity:64.20;
kegg_pathway_id 00230; 00400; 00240; 02020; 00983;
kegg_pathway_name Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism; Two-component system - General; Drug metabolism - other enzymes;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id TRPSYN-PWY; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00591; PF02885;
pfam_desc Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain;
pfam_id Glycos_transf_3; Glycos_trans_3N;
pfam_target db:Pfam-A.hmm|PF00591.21 evalue:9.8e-91 score:303.1 best_domain_score:302.7 name:Glycos_transf_3; db:Pfam-A.hmm|PF02885.17 evalue:2.7e-17 score:61.6 best_domain_score:61.1 name:Glycos_trans_3N;
sprot_desc Anthranilate phosphoribosyltransferase;
sprot_id sp|A7NL64|TRPD_ROSCS;
sprot_target db:uniprot_sprot|sp|A7NL64|TRPD_ROSCS 1 337 evalue:5.6e-80 qcov:97.10 identity:50.30;
tigrfam_acc TIGR01245;
tigrfam_desc anthranilate phosphoribosyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpD;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01245 evalue:1e-114 score:382.4 best_domain_score:382.2 name:TIGR01245;
21195 22160 CDS
ID metaerg.pl|02231
allec_ids 5.4.99.12;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0106029; GO:0031119;
allko_ids K06173;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90382.1 4 263 evalue:1.9e-67 qcov:81.00 identity:54.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01416;
pfam_desc tRNA pseudouridine synthase;
pfam_id PseudoU_synth_1;
pfam_target db:Pfam-A.hmm|PF01416.20 evalue:5.9e-26 score:90.3 best_domain_score:53.1 name:PseudoU_synth_1;
sprot_desc tRNA pseudouridine synthase A;
sprot_id sp|Q2S4S9|TRUA_SALRD;
sprot_target db:uniprot_sprot|sp|Q2S4S9|TRUA_SALRD 8 275 evalue:4.2e-37 qcov:83.50 identity:37.90;
22135 22791 CDS
ID metaerg.pl|02232
allec_ids 2.2.1.2; 4.1.2.-;
allgo_ids GO:0005975; GO:0005737; GO:0016832; GO:0004801; GO:0006098;
allko_ids K00616;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_45 1 218 evalue:2.9e-83 qcov:100.00 identity:68.80;
kegg_pathway_id 00030;
kegg_pathway_name Pentose phosphate pathway;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id CALVIN-PWY; PENTOSE-P-PWY; NPGLUCAT-PWY; PWY-1861; P185-PWY; NONOXIPENT-PWY; P124-PWY; PHOTOALL-PWY; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; PWY-5723;
metacyc_pathway_name Calvin-Benson-Bassham cycle;; pentose phosphate pathway;; Entner-Doudoroff pathway II (non-phosphorylative);; formaldehyde assimilation II (assimilatory RuMP Cycle);; formaldehyde assimilation III (dihydroxyacetone cycle);; pentose phosphate pathway (non-oxidative branch);; Bifidobacterium shunt;; oxygenic photosynthesis;; 4-hydroxyphenylacetate degradation;; Rubisco shunt;;
metacyc_pathway_type Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; Pentose-Phosphate-Cycle; Super-Pathways;; Entner-Duodoroff-Pathways;; Formaldehyde-Assimilation;; Formaldehyde-Assimilation;; Pentose-Phosphate-Cycle;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Photosynthesis; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; Energy-Metabolism;;
pfam_acc PF00923;
pfam_desc Transaldolase/Fructose-6-phosphate aldolase;
pfam_id TAL_FSA;
pfam_target db:Pfam-A.hmm|PF00923.19 evalue:3.3e-61 score:206.4 best_domain_score:203.5 name:TAL_FSA;
sprot_desc Probable transaldolase;
sprot_id sp|B4S6D0|TAL_PROA2;
sprot_target db:uniprot_sprot|sp|B4S6D0|TAL_PROA2 1 210 evalue:2.3e-71 qcov:96.30 identity:59.30;
tigrfam_acc TIGR00875;
tigrfam_desc fructose-6-phosphate aldolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name fsa_talC_mipB;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00875 evalue:7.2e-89 score:296.0 best_domain_score:295.7 name:TIGR00875;
22797 24383 CDS
ID metaerg.pl|02233
allec_ids 3.4.21.107;
allgo_ids GO:0005515; GO:0030288; GO:0004252;
allko_ids K04771;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_44 29 528 evalue:4.9e-129 qcov:94.70 identity:52.60;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF00595; PF13180; PF17820; PF14685; PF00089; PF13365;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Tricorn protease PDZ domain; Trypsin; Trypsin-like peptidase domain;
pfam_id PDZ; PDZ_2; PDZ_6; Tricorn_PDZ; Trypsin; Trypsin_2;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:2.2e-13 score:49.6 best_domain_score:26.6 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:7.8e-17 score:60.6 best_domain_score:37.5 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:1.4e-10 score:40.1 best_domain_score:26.9 name:PDZ_6; db:Pfam-A.hmm|PF14685.6 evalue:5.7e-06 score:25.5 best_domain_score:11.3 name:Tricorn_PDZ; db:Pfam-A.hmm|PF00089.26 evalue:7.8e-12 score:44.7 best_domain_score:43.5 name:Trypsin; db:Pfam-A.hmm|PF13365.6 evalue:2.4e-33 score:115.4 best_domain_score:115.4 name:Trypsin_2;
sp YES;
sprot_desc Probable periplasmic serine endoprotease DegP-like;
sprot_id sp|E1V4H2|DEGPL_HALED;
sprot_target db:uniprot_sprot|sp|E1V4H2|DEGPL_HALED 112 516 evalue:6.2e-62 qcov:76.70 identity:36.80;
22797 22955 lipoprotein_signal_peptide
ID metaerg.pl|02234
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
24488 25939 CDS
ID metaerg.pl|02235
allec_ids 4.3.2.2;
allgo_ids GO:0005829; GO:0070626; GO:0004018; GO:0044208; GO:0006189;
allko_ids K01756; K01857; K01679; K01744;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_43 10 483 evalue:2.7e-198 qcov:98.10 identity:74.90;
kegg_pathway_id 00230; 00020; 00362; 00910; 00720; 00252;
kegg_pathway_name Purine metabolism; Citrate cycle (TCA cycle); Benzoate degradation via hydroxylation; Nitrogen metabolism; Reductive carboxylate cycle (CO2 fixation); Alanine and aspartate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id P121-PWY; PWY-6124; DENOVOPURINE2-PWY; PWY-841; PWY-6123; PRPP-PWY; PWY-6126;
metacyc_pathway_name adenine and adenosine salvage I;; inosine-5'-phosphate biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis I;; inosine-5'-phosphate biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Adenine-Adenosine-Salvage;; IMP-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF10397; PF00206;
pfam_desc Adenylosuccinate lyase C-terminus; Lyase;
pfam_id ADSL_C; Lyase_1;
pfam_target db:Pfam-A.hmm|PF10397.9 evalue:4.7e-16 score:58.3 best_domain_score:56.6 name:ADSL_C; db:Pfam-A.hmm|PF00206.20 evalue:4.3e-22 score:78.1 best_domain_score:77.4 name:Lyase_1;
sprot_desc Adenylosuccinate lyase;
sprot_id sp|P21265|PUR8_CHICK;
sprot_target db:uniprot_sprot|sp|P21265|PUR8_CHICK 10 466 evalue:8.8e-140 qcov:94.60 identity:55.00;
tigrfam_acc TIGR00928;
tigrfam_desc adenylosuccinate lyase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purB;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00928 evalue:2.4e-114 score:381.6 best_domain_score:381.4 name:TIGR00928;
25942 26931 CDS
ID metaerg.pl|02236
allec_ids 6.3.2.6;
allgo_ids GO:0005524; GO:0004639; GO:0006189;
allko_ids K01945; K13713; K01923;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002313925;
genomedb_acc GCA_002313925.1;
genomedb_target db:genomedb|GCA_002313925.1|DCAZ01000104.1_18 13 325 evalue:2.6e-104 qcov:95.10 identity:60.10;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PWY-6124; DENOVOPURINE2-PWY; PRPP-PWY; PWY-841; PWY-6123;
metacyc_pathway_name inosine-5'-phosphate biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; inosine-5'-phosphate biosynthesis I;;
metacyc_pathway_type IMP-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;;
pfam_acc PF01259;
pfam_desc SAICAR synthetase;
pfam_id SAICAR_synt;
pfam_target db:Pfam-A.hmm|PF01259.18 evalue:6.2e-87 score:290.6 best_domain_score:290.4 name:SAICAR_synt;
sprot_desc Putative phosphoribosylaminoimidazole-succinocarboxamide synthase B;
sprot_id sp|Q89W81|PUR72_BRADU;
sprot_target db:uniprot_sprot|sp|Q89W81|PUR72_BRADU 13 317 evalue:2.5e-77 qcov:92.70 identity:50.60;
tigrfam_acc TIGR00081;
tigrfam_desc phosphoribosylaminoimidazolesuccinocarboxamide synthase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purC;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00081 evalue:6.7e-61 score:205.3 best_domain_score:204.9 name:TIGR00081;
26933 27853 CDS
ID metaerg.pl|02237
allec_ids 2.7.8.8;
allgo_ids GO:0008654; GO:0016020; GO:0016780; GO:0005576; GO:0016021; GO:0005886; GO:0003882;
allko_ids K00998; K17103;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000040.1_10 23 300 evalue:2.8e-84 qcov:90.80 identity:58.60;
kegg_pathway_id 00564; 00260;
kegg_pathway_name Glycerophospholipid metabolism; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PHOSLIPSYN-PWY; PHOSLIPSYN2-PWY; PWY-5669;
metacyc_pathway_name superpathway of phospholipid biosynthesis I (bacteria);; superpathway of phospholipid biosynthesis II (plants);; phosphatidylserine and phosphatidylethanolamine biosynthesis I;;
metacyc_pathway_type Phospholipid-Biosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylethanolamineBiosynthesis; Phosphatidylserine-Biosynthesis;;
pfam_acc PF01066;
pfam_desc CDP-alcohol phosphatidyltransferase;
pfam_id CDP-OH_P_transf;
pfam_target db:Pfam-A.hmm|PF01066.21 evalue:1.3e-13 score:50.7 best_domain_score:50.7 name:CDP-OH_P_transf;
sprot_desc CDP-diacylglycerol--serine O-phosphatidyltransferase;
sprot_id sp|P9WPG1|PSS_MYCTU;
sprot_target db:uniprot_sprot|sp|P9WPG1|PSS_MYCTU 27 250 evalue:4.0e-21 qcov:73.20 identity:33.60;
tigrfam_acc TIGR00473;
tigrfam_desc CDP-diacylglycerol-serine O-phosphatidyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name pssA;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00473 evalue:3.2e-36 score:123.9 best_domain_score:123.2 name:TIGR00473;
tm_num 5;
26933 27853 transmembrane_helix
ID metaerg.pl|02238
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i27035-27103o27293-27352i27389-27457o27485-27553i27611-27679o;
27850 28116 CDS
ID metaerg.pl|02239
allec_ids 6.3.5.3;
allgo_ids GO:0005737; GO:0005524; GO:0004642; GO:0006189;
allko_ids K01952; K23264;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000001.1_96 1 83 evalue:6.0e-24 qcov:94.30 identity:69.90;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6121; PWY-6122; PRPP-PWY; PWY-6277; PWY-841;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis I;; 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; AIR-Biosynthesis;; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF02700;
pfam_desc Phosphoribosylformylglycinamidine (FGAM) synthase;
pfam_id PurS;
pfam_target db:Pfam-A.hmm|PF02700.14 evalue:4e-30 score:103.0 best_domain_score:102.9 name:PurS;
sprot_desc Phosphoribosylformylglycinamidine synthase subunit PurS;
sprot_id sp|Q55842|PURS_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55842|PURS_SYNY3 4 80 evalue:9.8e-13 qcov:87.50 identity:46.80;
tigrfam_acc TIGR00302;
tigrfam_desc phosphoribosylformylglycinamidine synthase, purS protein;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name TIGR00302;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00302 evalue:2.3e-25 score:87.8 best_domain_score:87.6 name:TIGR00302;
28113 28826 CDS
ID metaerg.pl|02240
allec_ids 6.3.5.3;
allgo_ids GO:0003824; GO:0009236; GO:0005737; GO:0005524; GO:0004359; GO:0004642; GO:0006189; GO:0006541;
allko_ids K01952; K23265;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90379.1 1 233 evalue:1.7e-81 qcov:98.30 identity:64.40;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PRPP-PWY; PWY-6277; PWY-841; PWY-6121; DENOVOPURINE2-PWY; PWY-6122;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; 5-aminoimidazole ribonucleotide biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis II;;
metacyc_pathway_type Super-Pathways;; AIR-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;;
pfam_acc PF01965; PF00117; PF07685; PF13507;
pfam_desc DJ-1/PfpI family; Glutamine amidotransferase class-I; CobB/CobQ-like glutamine amidotransferase domain; CobB/CobQ-like glutamine amidotransferase domain;
pfam_id DJ-1_PfpI; GATase; GATase_3; GATase_5;
pfam_target db:Pfam-A.hmm|PF01965.24 evalue:2.7e-08 score:33.0 best_domain_score:32.4 name:DJ-1_PfpI; db:Pfam-A.hmm|PF00117.28 evalue:3.4e-05 score:22.9 best_domain_score:22.3 name:GATase; db:Pfam-A.hmm|PF07685.14 evalue:5.1e-09 score:35.2 best_domain_score:34.2 name:GATase_3; db:Pfam-A.hmm|PF13507.6 evalue:8.2e-42 score:142.3 best_domain_score:142.0 name:GATase_5;
sprot_desc Phosphoribosylformylglycinamidine synthase subunit PurQ;
sprot_id sp|Q89IB6|PURQ_BRADU;
sprot_target db:uniprot_sprot|sp|Q89IB6|PURQ_BRADU 1 228 evalue:1.2e-73 qcov:96.20 identity:57.20;
tigrfam_acc TIGR01737;
tigrfam_desc phosphoribosylformylglycinamidine synthase I;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name FGAM_synth_I;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01737 evalue:2e-91 score:304.5 best_domain_score:304.4 name:TIGR01737;
28823 31168 CDS
ID metaerg.pl|02241
allec_ids 6.3.5.3;
allgo_ids GO:0005737; GO:0005524; GO:0000287; GO:0004642; GO:0006189;
allko_ids K01952; K23269;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_37 9 772 evalue:0.0e+00 qcov:97.80 identity:72.30;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6121; PWY-6122; PRPP-PWY; PWY-6277; PWY-841;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis I;; 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; AIR-Biosynthesis;; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00586; PF02769; PF18072;
pfam_desc AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; Formylglycinamide ribonucleotide amidotransferase linker domain;
pfam_id AIRS; AIRS_C; FGAR-AT_linker;
pfam_target db:Pfam-A.hmm|PF00586.24 evalue:1.4e-47 score:159.5 best_domain_score:85.5 name:AIRS; db:Pfam-A.hmm|PF02769.22 evalue:1.4e-54 score:183.7 best_domain_score:111.8 name:AIRS_C; db:Pfam-A.hmm|PF18072.1 evalue:3.9e-13 score:49.0 best_domain_score:47.9 name:FGAR-AT_linker;
sprot_desc Phosphoribosylformylglycinamidine synthase subunit PurL;
sprot_id sp|Q2RGU5|PURL_MOOTA;
sprot_target db:uniprot_sprot|sp|Q2RGU5|PURL_MOOTA 33 774 evalue:2.1e-236 qcov:95.00 identity:55.30;
tigrfam_acc TIGR01736;
tigrfam_desc phosphoribosylformylglycinamidine synthase II;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name FGAM_synth_II;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01736 evalue:1.3e-276 score:918.8 best_domain_score:918.6 name:TIGR01736;
31168 32715 CDS
ID metaerg.pl|02242
allec_ids 2.4.2.14;
allgo_ids GO:0009116; GO:0005618; GO:0009570; GO:0005829; GO:0009536; GO:0009532; GO:0004044; GO:0051536; GO:0046872; GO:0006189; GO:0006541; GO:0009113;
allko_ids K00764;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000008.1_123 25 504 evalue:1.4e-200 qcov:93.20 identity:72.30;
kegg_pathway_id 00251; 00230;
kegg_pathway_name Glutamate metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6121; PWY-6122; PRPP-PWY; PWY-841; PWY-6277;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis I;; 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; AIR-Biosynthesis;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;;
pfam_acc PF13230; PF13522; PF13537; PF00156;
pfam_desc Glutamine amidotransferases class-II; Glutamine amidotransferase domain; Glutamine amidotransferase domain; Phosphoribosyl transferase domain;
pfam_id GATase_4; GATase_6; GATase_7; Pribosyltran;
pfam_target db:Pfam-A.hmm|PF13230.6 evalue:3.6e-07 score:28.6 best_domain_score:26.4 name:GATase_4; db:Pfam-A.hmm|PF13522.6 evalue:2.2e-19 score:69.2 best_domain_score:68.5 name:GATase_6; db:Pfam-A.hmm|PF13537.6 evalue:1.4e-22 score:79.2 best_domain_score:78.6 name:GATase_7; db:Pfam-A.hmm|PF00156.27 evalue:2.4e-06 score:26.4 best_domain_score:24.3 name:Pribosyltran;
sprot_desc Amidophosphoribosyltransferase 1, chloroplastic;
sprot_id sp|Q9SI61|ASE1_ARATH;
sprot_target db:uniprot_sprot|sp|Q9SI61|ASE1_ARATH 46 509 evalue:2.5e-132 qcov:90.10 identity:51.70;
tigrfam_acc TIGR01134;
tigrfam_desc amidophosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purF;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01134 evalue:9.8e-156 score:518.6 best_domain_score:518.4 name:TIGR01134;
32720 33772 CDS
ID metaerg.pl|02243
allec_ids 3.5.4.4;
allgo_ids GO:0019239; GO:0005829; GO:0004000; GO:0008270; GO:0006154; GO:0043103; GO:0046103; GO:0009117; GO:0009168;
allko_ids K01488;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_35 6 342 evalue:3.1e-95 qcov:96.30 identity:56.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id P121-PWY; SALVADEHYPOX-PWY; PWY-6353; PWY0-1296;
metacyc_pathway_name adenine and adenosine salvage I;; adenosine nucleotides degradation II;; purine nucleotides degradation II (aerobic);; purine ribonucleosides degradation;;
metacyc_pathway_type Adenine-Adenosine-Salvage;; Adenosine-Nucleotides-Degradation;; Purine-Degradation; Super-Pathways;; Purine-Degradation;;
pfam_acc PF00962;
pfam_desc Adenosine/AMP deaminase;
pfam_id A_deaminase;
pfam_target db:Pfam-A.hmm|PF00962.22 evalue:1.7e-76 score:256.9 best_domain_score:256.7 name:A_deaminase;
sprot_desc Adenosine deaminase 2;
sprot_id sp|Q9X7T2|ADD2_STRCO;
sprot_target db:uniprot_sprot|sp|Q9X7T2|ADD2_STRCO 13 336 evalue:3.0e-65 qcov:92.60 identity:44.80;
tigrfam_acc TIGR01430;
tigrfam_desc adenosine deaminase;
tigrfam_name aden_deam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01430 evalue:9.2e-94 score:313.2 best_domain_score:313.1 name:TIGR01430;
36706 33794 CDS
ID metaerg.pl|02244
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF13715; PF13620; PF17210;
pfam_desc CarboxypepD_reg-like domain; Carboxypeptidase regulatory-like domain; SdrD B-like domain;
pfam_id CarbopepD_reg_2; CarboxypepD_reg; SdrD_B;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:1.7e-10 score:40.0 best_domain_score:21.4 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF13620.6 evalue:1.5e-18 score:66.1 best_domain_score:40.8 name:CarboxypepD_reg; db:Pfam-A.hmm|PF17210.3 evalue:1.8e-11 score:43.5 best_domain_score:22.7 name:SdrD_B;
sp YES;
tm_num 1;
33794 33910 lipoprotein_signal_peptide
ID metaerg.pl|02245
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
36706 33794 transmembrane_helix
ID metaerg.pl|02246
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i33860-33928o;
37745 36750 CDS
ID metaerg.pl|02247
allec_ids 3.1.3.11;
allgo_ids GO:0005737; GO:0042132; GO:0000287; GO:0019253;
allko_ids K03841;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002348465;
genomedb_acc GCA_002348465.1;
genomedb_target db:genomedb|GCA_002348465.1|DEBI01000111.1_11 1 331 evalue:1.1e-121 qcov:100.00 identity:63.40;
kegg_pathway_id 00010; 00710; 00051; 00030;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Fructose and mannose metabolism; Pentose phosphate pathway;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id GLYCOLYSIS-TCA-GLYOX-BYPASS; P185-PWY; GLUCONEO-PWY; P441-PWY; ANAEROFRUCAT-PWY; PHOTOALL-PWY; GLYCOLYSIS; CALVIN-PWY; GLYCOLYSIS-E-D; PWY-5484; P461-PWY;
metacyc_pathway_name superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; formaldehyde assimilation III (dihydroxyacetone cycle);; gluconeogenesis I;; superpathway of N-acetylneuraminate degradation;; homolactic fermentation;; oxygenic photosynthesis;; glycolysis I (from glucose 6-phosphate);; Calvin-Benson-Bassham cycle;; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Formaldehyde-Assimilation;; Gluconeogenesis;; CARBOXYLATES-DEG; Super-Pathways;; Fermentation-to-Lactate; Super-Pathways;; Photosynthesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;;
pfam_acc PF00316;
pfam_desc Fructose-1-6-bisphosphatase, N-terminal domain;
pfam_id FBPase;
pfam_target db:Pfam-A.hmm|PF00316.20 evalue:6.3e-70 score:233.7 best_domain_score:233.4 name:FBPase;
sprot_desc Fructose-1,6-bisphosphatase class 1;
sprot_id sp|B3QWF5|F16PA_CHLT3;
sprot_target db:uniprot_sprot|sp|B3QWF5|F16PA_CHLT3 6 324 evalue:5.5e-101 qcov:96.40 identity:56.40;
40252 37844 CDS
ID metaerg.pl|02248
allgo_ids GO:0016021; GO:0005886; GO:0030420;
allko_ids K02238;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000018.1_11 47 802 evalue:2.6e-134 qcov:94.30 identity:44.30;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF03772; PF00753; PF12706;
pfam_desc Competence protein; Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain;
pfam_id Competence; Lactamase_B; Lactamase_B_2;
pfam_target db:Pfam-A.hmm|PF03772.16 evalue:2.3e-48 score:164.1 best_domain_score:164.1 name:Competence; db:Pfam-A.hmm|PF00753.27 evalue:3e-12 score:46.2 best_domain_score:45.0 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:1e-07 score:30.9 best_domain_score:30.1 name:Lactamase_B_2;
sprot_desc Recombination protein 2;
sprot_id sp|P44408|REC2_HAEIN;
sprot_target db:uniprot_sprot|sp|P44408|REC2_HAEIN 211 788 evalue:1.2e-21 qcov:72.10 identity:28.30;
tigrfam_acc TIGR00360; TIGR00361;
tigrfam_desc ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2;
tigrfam_mainrole Unknown function; Cellular processes;
tigrfam_name ComEC_N-term; ComEC_Rec2;
tigrfam_sub1role General; DNA transformation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00360 evalue:1.7e-17 score:63.4 best_domain_score:61.6 name:TIGR00360; db:TIGRFAMs.hmm|TIGR00361 evalue:8.3e-67 score:224.9 best_domain_score:222.6 name:TIGR00361;
tm_num 9;
40252 37844 transmembrane_helix
ID metaerg.pl|02249
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i37877-37945o37973-38032i38540-38608o38651-38719i38753-38821o39062-39130i39143-39211o39254-39322i39359-39418o;
40660 40346 CDS
ID metaerg.pl|02250
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000018.1_10 8 88 evalue:8.2e-12 qcov:77.90 identity:55.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
tm_num 1;
40660 40346 transmembrane_helix
ID metaerg.pl|02251
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology o40439-40507i;
42180 40684 CDS
ID metaerg.pl|02252
allec_ids 2.8.4.3; 2.1.1.- 2.8.1.-;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0016740; GO:0006400;
allko_ids K06168;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06725.1 8 482 evalue:2.2e-171 qcov:95.40 identity:65.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF04055; PF01938; PF00919;
pfam_desc Radical SAM superfamily; TRAM domain; Uncharacterized protein family UPF0004;
pfam_id Radical_SAM; TRAM; UPF0004;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:8e-33 score:113.4 best_domain_score:112.7 name:Radical_SAM; db:Pfam-A.hmm|PF01938.20 evalue:3.7e-05 score:22.9 best_domain_score:21.9 name:TRAM; db:Pfam-A.hmm|PF00919.20 evalue:4.6e-31 score:106.0 best_domain_score:105.2 name:UPF0004;
sprot_desc tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase;
sprot_id sp|B3EGT4|MIAB_CHLL2;
sprot_target db:uniprot_sprot|sp|B3EGT4|MIAB_CHLL2 8 482 evalue:3.4e-94 qcov:95.40 identity:39.60;
tigrfam_acc TIGR00089; TIGR01574;
tigrfam_desc radical SAM methylthiotransferase, MiaB/RimO family; tRNA-i(6)A37 thiotransferase enzyme MiaB;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00089; miaB-methiolase;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00089 evalue:5.5e-127 score:423.2 best_domain_score:311.4 name:TIGR00089; db:TIGRFAMs.hmm|TIGR01574 evalue:1e-128 score:429.2 best_domain_score:305.4 name:TIGR01574;
43323 42262 CDS
ID metaerg.pl|02253
allgo_ids GO:0009116;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__FEN-1250;s__FEN-1250 sp003142495;
genomedb_acc GCA_003142495.1;
genomedb_target db:genomedb|GCA_003142495.1|PLMM01000184.1_8 1 300 evalue:4.4e-65 qcov:85.00 identity:44.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:2.2e-07 score:29.8 best_domain_score:26.7 name:Pribosyltran;
43900 43403 CDS
ID metaerg.pl|02254
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000004.1_2 2 135 evalue:6.4e-35 qcov:81.20 identity:65.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
sp YES;
43403 43492 signal_peptide
ID metaerg.pl|02255
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
44325 44879 CDS
ID metaerg.pl|02256
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
45182 44922 CDS
ID metaerg.pl|02257
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__GCA-2400775;f__GCA-2400775;g__GCA-2400775;s__GCA-2400775 sp002400775;
genomedb_acc GCA_002400775.1;
genomedb_target db:genomedb|GCA_002400775.1|PCH60762.1 1 80 evalue:7.5e-11 qcov:93.00 identity:71.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
47684 45504 CDS
ID metaerg.pl|02258
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Zetaproteobacteria;o__Mariprofundales;f__Mariprofundaceae;g__Mariprofundus;s__Mariprofundus ferrooxydans;
genomedb_acc GCF_000153765.1;
genomedb_target db:genomedb|GCF_000153765.1|WP_050754733.1 1 726 evalue:1.5e-144 qcov:100.00 identity:38.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF13166; PF13304;
pfam_desc AAA domain; AAA domain, putative AbiEii toxin, Type IV TA system;
pfam_id AAA_13; AAA_21;
pfam_target db:Pfam-A.hmm|PF13166.6 evalue:3.3e-153 score:511.2 best_domain_score:511.0 name:AAA_13; db:Pfam-A.hmm|PF13304.6 evalue:1e-06 score:28.0 best_domain_score:18.5 name:AAA_21;
50705 47721 CDS
ID metaerg.pl|02259
allgo_ids GO:0003677; GO:0005524; GO:0016787;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__OPB41;f__UBA912;g__UBA912;s__UBA912 sp002293965;
genomedb_acc GCA_002293965.1;
genomedb_target db:genomedb|GCA_002293965.1|DBEG01000077.1_15 4 989 evalue:0.0e+00 qcov:99.20 identity:66.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF04851;
pfam_desc Type III restriction enzyme, res subunit;
pfam_id ResIII;
pfam_target db:Pfam-A.hmm|PF04851.15 evalue:3.9e-13 score:49.0 best_domain_score:47.4 name:ResIII;
52605 50707 CDS
ID metaerg.pl|02260
allec_ids 2.1.1.72;
allgo_ids GO:0003677; GO:0006306; GO:0008170; GO:0005737; GO:0008168; GO:0009007; GO:0009307;
allko_ids K07316;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E aeruginosa;
genomedb_acc GCF_002927165.1;
genomedb_target db:genomedb|GCF_002927165.1|WP_054890536.1 12 632 evalue:2.9e-213 qcov:98.30 identity:60.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01555;
pfam_desc DNA methylase;
pfam_id N6_N4_Mtase;
pfam_target db:Pfam-A.hmm|PF01555.18 evalue:6.9e-35 score:120.0 best_domain_score:119.3 name:N6_N4_Mtase;
sprot_desc Type III restriction-modification system StyLTI enzyme mod;
sprot_id sp|P40814|T3MO_SALTY;
sprot_target db:uniprot_sprot|sp|P40814|T3MO_SALTY 53 496 evalue:6.1e-56 qcov:70.30 identity:33.30;
53401 52643 CDS
ID metaerg.pl|02261
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Thermomonas;s__Thermomonas hydrothermalis;
genomedb_acc GCF_900129205.1;
genomedb_target db:genomedb|GCF_900129205.1|WP_072756442.1 1 252 evalue:2.5e-54 qcov:100.00 identity:50.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF14335;
pfam_desc Domain of unknown function (DUF4391);
pfam_id DUF4391;
pfam_target db:Pfam-A.hmm|PF14335.6 evalue:9.7e-59 score:198.2 best_domain_score:198.0 name:DUF4391;
56589 53398 CDS
ID metaerg.pl|02262
allgo_ids GO:0003677; GO:0005524; GO:0016787;
allko_ids K01509;
genomedb_OC d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira;s__Nitrospira nitrificans;
genomedb_acc GCF_001458775.1;
genomedb_target db:genomedb|GCF_001458775.1|WP_090899449.1 1 1061 evalue:0.0e+00 qcov:99.80 identity:70.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF00271; PF04851; PF00176;
pfam_desc Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; SNF2 family N-terminal domain;
pfam_id Helicase_C; ResIII; SNF2_N;
pfam_target db:Pfam-A.hmm|PF00271.31 evalue:1.2e-12 score:47.4 best_domain_score:45.8 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:9.3e-06 score:25.0 best_domain_score:19.6 name:ResIII; db:Pfam-A.hmm|PF00176.23 evalue:1.3e-13 score:49.6 best_domain_score:29.0 name:SNF2_N;
57305 56802 CDS
ID metaerg.pl|02263
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
58168 58668 CDS
ID metaerg.pl|02264
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
tm_num 3;
58168 58668 transmembrane_helix
ID metaerg.pl|02265
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i58345-58413o58441-58509i58528-58596o;
58721 59119 CDS
ID metaerg.pl|02266
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
sp YES;
58721 58798 signal_peptide
ID metaerg.pl|02267
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
59294 60373 CDS
ID metaerg.pl|02268
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
61156 61467 CDS
ID metaerg.pl|02269
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Microvirga;s__Microvirga sp003151255;
genomedb_acc GCF_003151255.1;
genomedb_target db:genomedb|GCF_003151255.1|WP_109596732.1 1 103 evalue:7.6e-18 qcov:100.00 identity:45.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
62301 61849 CDS
ID metaerg.pl|02270
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
62648 64192 CDS
ID metaerg.pl|02271
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Verrucomicrobiaceae;g__Verrucomicrobium;s__Verrucomicrobium spinosum;
genomedb_acc GCF_000172155.1;
genomedb_target db:genomedb|GCF_000172155.1|WP_081452600.1 36 406 evalue:4.0e-19 qcov:72.20 identity:25.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
tigrfam_acc TIGR01613;
tigrfam_desc phage/plasmid primase, P4 family, C-terminal domain;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name primase_Cterm;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01613 evalue:3.4e-32 score:110.7 best_domain_score:110.3 name:TIGR01613;
64611 65213 CDS
ID metaerg.pl|02272
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
65183 66661 CDS
ID metaerg.pl|02273
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
68195 67632 CDS
ID metaerg.pl|02274
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
tm_num 5;
68195 67632 transmembrane_helix
ID metaerg.pl|02275
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i67725-67784o67827-67895i67932-68000o68028-68081i68106-68174o;
69883 68192 CDS
ID metaerg.pl|02276
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
70224 70015 CDS
ID metaerg.pl|02277
genomedb_OC d__Bacteria;p__Desulfuromonadota;c__Desulfuromonadia;o__Geobacterales;f__Geobacteraceae;g__OR-1;s__OR-1 sp000813145;
genomedb_acc GCF_000813145.1;
genomedb_target db:genomedb|GCF_000813145.1|WP_041975012.1 3 51 evalue:3.8e-13 qcov:71.00 identity:69.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
70695 70309 CDS
ID metaerg.pl|02278
allgo_ids GO:0015074;
genomedb_OC d__Bacteria;p__Desulfuromonadota;c__Desulfuromonadia;o__Geobacterales;f__Geobacteraceae;g__OR-1;s__OR-1 sp000813145;
genomedb_acc GCF_000813145.1;
genomedb_target db:genomedb|GCF_000813145.1|WP_041975012.1 6 128 evalue:3.7e-38 qcov:96.10 identity:62.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF00665;
pfam_desc Integrase core domain;
pfam_id rve;
pfam_target db:Pfam-A.hmm|PF00665.26 evalue:1.8e-11 score:43.5 best_domain_score:42.9 name:rve;
72322 71051 CDS
ID metaerg.pl|02279
allec_ids 2.8.4.5; 2.1.1.- 2.8.1.-;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0035598; GO:0061712; GO:0035600;
allko_ids K18707;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000004.1_2 1 400 evalue:4.8e-127 qcov:94.60 identity:61.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF04055; PF00919;
pfam_desc Radical SAM superfamily; Uncharacterized protein family UPF0004;
pfam_id Radical_SAM; UPF0004;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:8.3e-18 score:64.5 best_domain_score:62.9 name:Radical_SAM; db:Pfam-A.hmm|PF00919.20 evalue:2.7e-23 score:81.1 best_domain_score:80.5 name:UPF0004;
sprot_desc Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB;
sprot_id sp|P54462|MTAB_BACSU;
sprot_target db:uniprot_sprot|sp|P54462|MTAB_BACSU 3 395 evalue:3.4e-55 qcov:92.90 identity:33.30;
tigrfam_acc TIGR00089;
tigrfam_desc radical SAM methylthiotransferase, MiaB/RimO family;
tigrfam_name TIGR00089;
tigrfam_target db:TIGRFAMs.hmm|TIGR00089 evalue:2.9e-95 score:318.7 best_domain_score:318.5 name:TIGR00089;
73574 72354 CDS
ID metaerg.pl|02280
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06727.1 23 404 evalue:8.9e-54 qcov:94.10 identity:35.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
sp YES;
72354 72476 signal_peptide
ID metaerg.pl|02281
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
74962 73571 CDS
ID metaerg.pl|02282
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_28 42 463 evalue:8.5e-69 qcov:91.10 identity:38.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
sp YES;
tm_num 1;
73571 73705 lipoprotein_signal_peptide
ID metaerg.pl|02283
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
74962 73571 transmembrane_helix
ID metaerg.pl|02284
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i73631-73699o;
75534 75112 CDS
ID metaerg.pl|02285
allec_ids 3.5.4.5;
allgo_ids GO:0004126; GO:0008270; GO:0009972;
allko_ids K01489;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000018.1_7 6 123 evalue:7.8e-34 qcov:84.30 identity:64.40;
kegg_pathway_id 00240; 00983;
kegg_pathway_name Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PWY0-1295; PWY0-163; P1-PWY; PWY-6556;
metacyc_pathway_name pyrimidine ribonucleosides degradation;; ; ; pyrimidine ribonucleosides salvage II;;
metacyc_pathway_type Pyrimidine-Ribonucleosides-Degradation;; ; ; Pyrimidine-Nucleotide-Salvage; Pyrimidine-Ribonucleosides-Degradation;;
pfam_acc PF00383; PF08211;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; Cytidine and deoxycytidylate deaminase zinc-binding region;
pfam_id dCMP_cyt_deam_1; dCMP_cyt_deam_2;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:1.5e-14 score:52.9 best_domain_score:52.6 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF08211.12 evalue:3.7e-09 score:36.1 best_domain_score:36.1 name:dCMP_cyt_deam_2;
sprot_desc Cytidine deaminase;
sprot_id sp|Q9KD53|CDD_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KD53|CDD_BACHD 1 126 evalue:4.2e-18 qcov:90.00 identity:41.40;
tigrfam_acc TIGR01354;
tigrfam_desc cytidine deaminase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name cyt_deam_tetra;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01354 evalue:7.4e-38 score:128.8 best_domain_score:128.6 name:TIGR01354;
76649 75573 CDS
ID metaerg.pl|02286
allec_ids 5.1.1.1;
allgo_ids GO:0008784; GO:0030170; GO:0030632;
allko_ids K01775;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000004.1_6 1 358 evalue:3.2e-79 qcov:100.00 identity:50.80;
kegg_pathway_id 00252; 00473;
kegg_pathway_name Alanine and aspartate metabolism; D-Alanine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id ALADEG-PWY; ALANINE-VALINESYN-PWY; PWY0-1061;
metacyc_pathway_name L-alanine degradation I;; L-alanine biosynthesis I;; superpathway of L-alanine biosynthesis;;
metacyc_pathway_type ALANINE-DEG;; ALANINE-SYN;; ALANINE-SYN; Super-Pathways;;
pfam_acc PF00842; PF01168;
pfam_desc Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain;
pfam_id Ala_racemase_C; Ala_racemase_N;
pfam_target db:Pfam-A.hmm|PF00842.21 evalue:6.5e-39 score:131.8 best_domain_score:131.3 name:Ala_racemase_C; db:Pfam-A.hmm|PF01168.20 evalue:9.7e-40 score:135.8 best_domain_score:135.4 name:Ala_racemase_N;
sprot_desc Alanine racemase;
sprot_id sp|A8ZRV0|ALR_DESOH;
sprot_target db:uniprot_sprot|sp|A8ZRV0|ALR_DESOH 1 355 evalue:1.4e-46 qcov:99.20 identity:35.80;
tigrfam_acc TIGR00492;
tigrfam_desc alanine racemase;
tigrfam_mainrole Cell envelope;
tigrfam_name alr;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00492 evalue:5.7e-64 score:215.5 best_domain_score:215.2 name:TIGR00492;
76913 77863 CDS
ID metaerg.pl|02287
allec_ids 3.6.1.8;
allgo_ids GO:0005524; GO:0047693; GO:0046872; GO:0047429; GO:0046061; GO:0006203; GO:0046076; GO:0046081; GO:0046047; GO:0046052;
allko_ids K02428; K04765;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90201.1 39 302 evalue:4.9e-68 qcov:83.50 identity:56.10;
kegg_pathway_id 00240; 00230;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF03819; PF01503;
pfam_desc MazG nucleotide pyrophosphohydrolase domain; Phosphoribosyl-ATP pyrophosphohydrolase;
pfam_id MazG; PRA-PH;
pfam_target db:Pfam-A.hmm|PF03819.17 evalue:8.6e-32 score:108.4 best_domain_score:73.8 name:MazG; db:Pfam-A.hmm|PF01503.17 evalue:3.7e-08 score:32.9 best_domain_score:17.7 name:PRA-PH;
sprot_desc Nucleoside triphosphate pyrophosphohydrolase;
sprot_id sp|P44723|MAZG_HAEIN;
sprot_target db:uniprot_sprot|sp|P44723|MAZG_HAEIN 57 304 evalue:1.2e-39 qcov:78.50 identity:39.30;
tigrfam_acc TIGR00444;
tigrfam_desc MazG family protein;
tigrfam_mainrole Unknown function;
tigrfam_name mazG;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00444 evalue:1.4e-64 score:217.2 best_domain_score:216.8 name:TIGR00444;
79292 78243 CDS
ID metaerg.pl|02288
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
80288 79395 CDS
ID metaerg.pl|02289
allec_ids 1.1.1.95;
allgo_ids GO:0051287; GO:0055114; GO:0004617; GO:0006520; GO:0006564;
allko_ids K00058; K00018; K12972;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_24 7 297 evalue:2.5e-82 qcov:98.00 identity:53.80;
kegg_pathway_id 00630; 00260;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id SER-GLYSYN-PWY; SERSYN-PWY; SULFATE-CYS-PWY;
metacyc_pathway_name superpathway of L-serine and glycine biosynthesis I;; L-serine biosynthesis I;; superpathway of sulfate assimilation and cysteine biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; SERINE-BIOSYNTHESIS;; Sulfur-Metabolism; Super-Pathways;;
pfam_acc PF02826;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain;
pfam_id 2-Hacid_dh_C;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:2.9e-50 score:169.3 best_domain_score:169.0 name:2-Hacid_dh_C;
sprot_desc D-3-phosphoglycerate dehydrogenase;
sprot_id sp|Q58424|SERA_METJA;
sprot_target db:uniprot_sprot|sp|Q58424|SERA_METJA 7 293 evalue:4.6e-30 qcov:96.60 identity:29.60;
81323 80466 CDS
ID metaerg.pl|02290
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__QGGB01;s__QGGB01 sp003150675;
genomedb_acc GCF_003150675.1;
genomedb_target db:genomedb|GCF_003150675.1|WP_109647733.1 8 283 evalue:4.1e-82 qcov:96.80 identity:54.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
82840 81470 CDS
ID metaerg.pl|02291
allec_ids 6.1.1.22;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004816; GO:0003676; GO:0006421;
allko_ids K01893;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_23 30 456 evalue:7.3e-190 qcov:93.60 identity:74.70;
kegg_pathway_id 00970; 00252;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Alanine and aspartate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00152; PF01336;
pfam_desc tRNA synthetases class II (D, K and N) ; OB-fold nucleic acid binding domain;
pfam_id tRNA-synt_2; tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF00152.20 evalue:1.3e-80 score:270.1 best_domain_score:269.8 name:tRNA-synt_2; db:Pfam-A.hmm|PF01336.25 evalue:5.1e-15 score:54.5 best_domain_score:53.7 name:tRNA_anti-codon;
sprot_desc Asparagine--tRNA ligase;
sprot_id sp|A9WA97|SYN_CHLAA;
sprot_target db:uniprot_sprot|sp|A9WA97|SYN_CHLAA 31 456 evalue:3.2e-139 qcov:93.40 identity:56.60;
tigrfam_acc TIGR00457;
tigrfam_desc asparagine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name asnS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00457 evalue:2.3e-143 score:477.4 best_domain_score:477.1 name:TIGR00457;
85117 82952 CDS
ID metaerg.pl|02292
allec_ids 3.6.4.12;
allgo_ids GO:0003676; GO:0005524; GO:0004003; GO:0003677; GO:0006310; GO:0006281;
allko_ids K10896; K05592; K05591; K03655;
casgene_acc cd09639_cas3_CAS-I;
casgene_name cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:4.8e-06 score:25.1 best_domain_score:23.1 name:cas3;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_22 23 721 evalue:4.8e-268 qcov:96.90 identity:68.50;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF00270; PF00271; PF17191; PF04851; PF01336;
pfam_desc DEAD/DEAH box helicase; Helicase conserved C-terminal domain; RecG wedge domain; Type III restriction enzyme, res subunit; OB-fold nucleic acid binding domain;
pfam_id DEAD; Helicase_C; RecG_wedge; ResIII; tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:3e-17 score:62.2 best_domain_score:61.4 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:2.6e-21 score:75.3 best_domain_score:62.4 name:Helicase_C; db:Pfam-A.hmm|PF17191.4 evalue:2.5e-17 score:62.2 best_domain_score:61.7 name:RecG_wedge; db:Pfam-A.hmm|PF04851.15 evalue:9.3e-06 score:25.0 best_domain_score:23.4 name:ResIII; db:Pfam-A.hmm|PF01336.25 evalue:3.8e-07 score:29.2 best_domain_score:28.1 name:tRNA_anti-codon;
sprot_desc ATP-dependent DNA helicase RecG;
sprot_id sp|Q55681|RECG_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55681|RECG_SYNY3 25 704 evalue:2.2e-139 qcov:94.30 identity:43.30;
tigrfam_acc TIGR00643;
tigrfam_desc ATP-dependent DNA helicase RecG;
tigrfam_mainrole DNA metabolism;
tigrfam_name recG;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00643 evalue:2.7e-209 score:696.1 best_domain_score:695.9 name:TIGR00643;
86102 85125 CDS
ID metaerg.pl|02293
allgo_ids GO:0005525; GO:0006614; GO:0005737; GO:0031226; GO:0016020; GO:0005886; GO:0003924; GO:0005047; GO:0006605;
allko_ids K03110;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_21 2 323 evalue:1.2e-109 qcov:99.10 identity:67.40;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF13604; PF00448; PF02881;
pfam_desc AAA domain; SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain;
pfam_id AAA_30; SRP54; SRP54_N;
pfam_target db:Pfam-A.hmm|PF13604.6 evalue:2.4e-07 score:29.9 best_domain_score:29.2 name:AAA_30; db:Pfam-A.hmm|PF00448.22 evalue:2.4e-73 score:245.2 best_domain_score:244.9 name:SRP54; db:Pfam-A.hmm|PF02881.19 evalue:9.9e-08 score:31.3 best_domain_score:30.4 name:SRP54_N;
sprot_desc Signal recognition particle receptor FtsY;
sprot_id sp|P51835|FTSY_BACSU;
sprot_target db:uniprot_sprot|sp|P51835|FTSY_BACSU 8 321 evalue:1.3e-65 qcov:96.60 identity:46.00;
tigrfam_acc TIGR00064;
tigrfam_desc signal recognition particle-docking protein FtsY;
tigrfam_mainrole Protein fate;
tigrfam_name ftsY;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00064 evalue:3.6e-97 score:324.1 best_domain_score:323.6 name:TIGR00064;
88025 86232 CDS
ID metaerg.pl|02294
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000004.1_11 5 597 evalue:1.7e-45 qcov:99.30 identity:31.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
sp YES;
tm_num 2;
86232 86303 signal_peptide
ID metaerg.pl|02295
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
88025 86232 transmembrane_helix
ID metaerg.pl|02296
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology o86241-86300i86319-86387o;
89388 88081 CDS
ID metaerg.pl|02297
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2982;s__UBA2982 sp002347035;
genomedb_acc GCA_002347035.1;
genomedb_target db:genomedb|GCA_002347035.1|DEAM01000019.1_132 13 395 evalue:1.5e-123 qcov:88.00 identity:58.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:2e-33 score:113.7 best_domain_score:112.9 name:Peptidase_M23;
90854 89586 CDS
ID metaerg.pl|02298
allgo_ids GO:0003924; GO:0032153; GO:0005737; GO:0005525; GO:0051301; GO:0000917; GO:0043093; GO:0051258;
allko_ids K03531;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_18 1 422 evalue:1.5e-165 qcov:100.00 identity:75.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF12327; PF00091;
pfam_desc FtsZ family, C-terminal domain; Tubulin/FtsZ family, GTPase domain;
pfam_id FtsZ_C; Tubulin;
pfam_target db:Pfam-A.hmm|PF12327.8 evalue:1.7e-35 score:120.5 best_domain_score:119.7 name:FtsZ_C; db:Pfam-A.hmm|PF00091.25 evalue:8.4e-42 score:142.8 best_domain_score:142.1 name:Tubulin;
sprot_desc Cell division protein FtsZ;
sprot_id sp|Q2FZ89|FTSZ_STAA8;
sprot_target db:uniprot_sprot|sp|Q2FZ89|FTSZ_STAA8 3 319 evalue:6.4e-102 qcov:75.10 identity:60.60;
tigrfam_acc TIGR00065;
tigrfam_desc cell division protein FtsZ;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsZ;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR00065 evalue:1.6e-128 score:428.2 best_domain_score:427.7 name:TIGR00065;
92181 90949 CDS
ID metaerg.pl|02299
allgo_ids GO:0000902; GO:0032153; GO:0009898; GO:0051301; GO:0043093;
allko_ids K03590;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06738.1 1 410 evalue:9.9e-162 qcov:100.00 identity:69.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF14450; PF06723; PF02491;
pfam_desc Cell division protein FtsA; MreB/Mbl protein; SHS2 domain inserted in FTSA;
pfam_id FtsA; MreB_Mbl; SHS2_FTSA;
pfam_target db:Pfam-A.hmm|PF14450.6 evalue:1.6e-29 score:101.6 best_domain_score:68.7 name:FtsA; db:Pfam-A.hmm|PF06723.13 evalue:1.4e-06 score:26.6 best_domain_score:25.6 name:MreB_Mbl; db:Pfam-A.hmm|PF02491.20 evalue:1.2e-29 score:101.7 best_domain_score:99.6 name:SHS2_FTSA;
sprot_desc Cell division protein FtsA;
sprot_id sp|P47203|FTSA_PSEAE;
sprot_target db:uniprot_sprot|sp|P47203|FTSA_PSEAE 5 410 evalue:1.6e-86 qcov:99.00 identity:40.80;
tigrfam_acc TIGR01174;
tigrfam_desc cell division protein FtsA;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsA;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR01174 evalue:3.3e-116 score:387.5 best_domain_score:387.3 name:TIGR01174;
92921 92184 CDS
ID metaerg.pl|02300
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000004.1_16 1 239 evalue:3.4e-40 qcov:97.60 identity:42.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF08478;
pfam_desc POTRA domain, FtsQ-type;
pfam_id POTRA_1;
pfam_target db:Pfam-A.hmm|PF08478.10 evalue:1.3e-08 score:34.2 best_domain_score:33.1 name:POTRA_1;
sp YES;
92184 92243 signal_peptide
ID metaerg.pl|02301
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
94398 92914 CDS
ID metaerg.pl|02302
allec_ids 6.3.2.8;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0008763; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01928; K01924; K01929; K01925; K02558;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_15 13 474 evalue:4.1e-146 qcov:93.50 identity:59.90;
kegg_pathway_id 00471; 00300; 00550;
kegg_pathway_name D-Glutamine and D-glutamate metabolism; Lysine biosynthesis; Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PWY-6385; PWY-5265; PWY-6387; PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6386; PWY-6470;
metacyc_pathway_name peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01225; PF02875; PF08245;
pfam_desc Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase; Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF01225.25 evalue:1.2e-17 score:63.3 best_domain_score:61.9 name:Mur_ligase; db:Pfam-A.hmm|PF02875.21 evalue:2e-26 score:91.3 best_domain_score:86.7 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:1.9e-23 score:82.7 best_domain_score:82.3 name:Mur_ligase_M;
sp YES;
sprot_desc UDP-N-acetylmuramate--L-alanine ligase;
sprot_id sp|A1K3U7|MURC_AZOSB;
sprot_target db:uniprot_sprot|sp|A1K3U7|MURC_AZOSB 22 463 evalue:8.8e-87 qcov:89.50 identity:43.20;
tigrfam_acc TIGR01082;
tigrfam_desc UDP-N-acetylmuramate--L-alanine ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murC;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01082 evalue:6.4e-130 score:433.3 best_domain_score:433.2 name:TIGR01082;
92914 93039 signal_peptide
ID metaerg.pl|02303
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
95615 94395 CDS
ID metaerg.pl|02304
allec_ids 2.4.1.227;
allgo_ids GO:0005975; GO:0016758; GO:0030259; GO:0005886; GO:0051991; GO:0050511; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K02563;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000004.1_18 23 402 evalue:6.5e-97 qcov:93.60 identity:55.80;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PWY-6470; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-5265; PWY-6385;
metacyc_pathway_name peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis III (mycobacteria);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF03033; PF04101;
pfam_desc Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain;
pfam_id Glyco_transf_28; Glyco_tran_28_C;
pfam_target db:Pfam-A.hmm|PF03033.20 evalue:3.3e-27 score:94.5 best_domain_score:93.5 name:Glyco_transf_28; db:Pfam-A.hmm|PF04101.16 evalue:9.1e-34 score:116.1 best_domain_score:115.6 name:Glyco_tran_28_C;
sprot_desc UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;
sprot_id sp|A1BJX8|MURG_CHLPD;
sprot_target db:uniprot_sprot|sp|A1BJX8|MURG_CHLPD 25 395 evalue:7.1e-58 qcov:91.40 identity:40.30;
96810 95608 CDS
ID metaerg.pl|02305
allgo_ids GO:0016021; GO:0051301; GO:0032153; GO:0005887; GO:0015648; GO:0009252; GO:0008360; GO:0030435;
allko_ids K03588;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002724575;
genomedb_acc GCA_002724575.1;
genomedb_target db:genomedb|GCA_002724575.1|MBO76122.1 1 384 evalue:2.8e-129 qcov:96.00 identity:60.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01098;
pfam_desc Cell cycle protein;
pfam_id FTSW_RODA_SPOVE;
pfam_target db:Pfam-A.hmm|PF01098.19 evalue:2.2e-93 score:312.3 best_domain_score:312.0 name:FTSW_RODA_SPOVE;
sprot_desc Stage V sporulation protein E;
sprot_id sp|P07373|SP5E_BACSU;
sprot_target db:uniprot_sprot|sp|P07373|SP5E_BACSU 30 381 evalue:8.2e-59 qcov:88.00 identity:38.70;
tm_num 9;
96810 95608 transmembrane_helix
ID metaerg.pl|02306
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology o95689-95757i95791-95859o95887-95955i96094-96147o96157-96216i96220-96279o96481-96549i96568-96636o96679-96747i;
98333 96807 CDS
ID metaerg.pl|02307
allec_ids 6.3.2.9;
allgo_ids GO:0005524; GO:0009058; GO:0016874; GO:0005737; GO:0008764; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01928; K01925; K01924;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06743.1 22 506 evalue:6.0e-132 qcov:95.50 identity:56.30;
kegg_pathway_id 00550; 00471; 00300;
kegg_pathway_name Peptidoglycan biosynthesis; D-Glutamine and D-glutamate metabolism; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6386; PWY-6470; PWY-6385; PWY-5265; PWY-6387;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;;
pfam_acc PF02875; PF08245;
pfam_desc Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF02875.21 evalue:1.7e-08 score:33.8 best_domain_score:32.6 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:4.5e-26 score:91.3 best_domain_score:89.9 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
sprot_id sp|Q1IKG8|MURD_KORVE;
sprot_target db:uniprot_sprot|sp|Q1IKG8|MURD_KORVE 22 505 evalue:9.8e-73 qcov:95.30 identity:37.70;
tigrfam_acc TIGR01087;
tigrfam_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murD;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01087 evalue:2e-110 score:369.1 best_domain_score:368.9 name:TIGR01087;
99463 98330 CDS
ID metaerg.pl|02308
allec_ids 2.7.8.13;
allgo_ids GO:0008963; GO:0016021; GO:0005886; GO:0051992; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01000;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000099.1_11 1 377 evalue:6.6e-136 qcov:100.00 identity:68.80;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PWY-6470; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00953; PF10555;
pfam_desc Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1;
pfam_id Glycos_transf_4; MraY_sig1;
pfam_target db:Pfam-A.hmm|PF00953.21 evalue:7.2e-37 score:126.1 best_domain_score:124.9 name:Glycos_transf_4; db:Pfam-A.hmm|PF10555.9 evalue:1.1e-06 score:27.0 best_domain_score:25.5 name:MraY_sig1;
sprot_desc Phospho-N-acetylmuramoyl-pentapeptide-transferase;
sprot_id sp|C1A8A7|MRAY_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A8A7|MRAY_GEMAT 1 377 evalue:8.5e-82 qcov:100.00 identity:48.00;
tigrfam_acc TIGR00445;
tigrfam_desc phospho-N-acetylmuramoyl-pentapeptide-transferase;
tigrfam_mainrole Cell envelope;
tigrfam_name mraY;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00445 evalue:3.5e-104 score:347.9 best_domain_score:347.6 name:TIGR00445;
tm_num 10;
99463 98330 transmembrane_helix
ID metaerg.pl|02309
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology o98405-98473i98534-98602o98615-98668i98729-98788o98831-98899i98933-98992o99035-99103i99122-99187o99200-99268i99392-99451o;
100944 99463 CDS
ID metaerg.pl|02310
allec_ids 6.3.2.10;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0047480; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01929; K01925; K01928;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2982;s__UBA2982 sp002347035;
genomedb_acc GCA_002347035.1;
genomedb_target db:genomedb|GCA_002347035.1|DEAM01000019.1_141 10 460 evalue:1.3e-107 qcov:91.50 identity:50.30;
kegg_pathway_id 00300; 00471; 00550;
kegg_pathway_name Lysine biosynthesis; D-Glutamine and D-glutamate metabolism; Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PWY-6387; PWY-6385; PWY-5265; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6386; PWY-6470;
metacyc_pathway_name UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01225; PF02875; PF08245;
pfam_desc Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase; Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF01225.25 evalue:6.8e-09 score:35.2 best_domain_score:32.4 name:Mur_ligase; db:Pfam-A.hmm|PF02875.21 evalue:3.8e-10 score:39.1 best_domain_score:36.5 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:7.4e-30 score:103.6 best_domain_score:103.3 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;
sprot_id sp|P96613|MURF_BACSU;
sprot_target db:uniprot_sprot|sp|P96613|MURF_BACSU 24 463 evalue:4.9e-61 qcov:89.20 identity:34.70;
tigrfam_acc TIGR01143;
tigrfam_desc UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murF;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01143 evalue:7.4e-104 score:347.1 best_domain_score:347.0 name:TIGR01143;
102557 100941 CDS
ID metaerg.pl|02311
allec_ids 6.3.2.13;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0000287; GO:0004326; GO:0008765; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01928; K01925; K05362; K01924; K01929;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25442.1 52 533 evalue:2.4e-131 qcov:89.60 identity:54.10;
kegg_pathway_id 00550; 00471; 00300;
kegg_pathway_name Peptidoglycan biosynthesis; D-Glutamine and D-glutamate metabolism; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PEPTIDOGLYCANSYN-PWY; PWY-6385; PWY-6387;
metacyc_pathway_name peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis III (mycobacteria);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;;
pfam_acc PF01225; PF02875; PF08245;
pfam_desc Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase; Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF01225.25 evalue:1.8e-07 score:30.6 best_domain_score:27.6 name:Mur_ligase; db:Pfam-A.hmm|PF02875.21 evalue:1.8e-21 score:75.5 best_domain_score:73.8 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:6e-43 score:146.3 best_domain_score:145.8 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase;
sprot_id sp|Q8DJI4|MURE_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DJI4|MURE_THEEB 70 532 evalue:7.4e-79 qcov:86.10 identity:42.20;
tigrfam_acc TIGR01085;
tigrfam_desc UDP-N-acetylmuramyl-tripeptide synthetase;
tigrfam_mainrole Cell envelope;
tigrfam_name murE;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01085 evalue:4.6e-128 score:427.2 best_domain_score:426.9 name:TIGR01085;
104767 102554 CDS
ID metaerg.pl|02312
allgo_ids GO:0008658;
allko_ids K05366; K08282; K08884; K12556; K05364; K08384; K03587;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000004.1_24 1 689 evalue:2.9e-180 qcov:93.50 identity:53.00;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF03793; PF03717; PF00905;
pfam_desc PASTA domain; Penicillin-binding Protein dimerisation domain; Penicillin binding protein transpeptidase domain;
pfam_id PASTA; PBP_dimer; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF03793.19 evalue:6.3e-06 score:25.2 best_domain_score:24.1 name:PASTA; db:Pfam-A.hmm|PF03717.15 evalue:3.1e-17 score:62.7 best_domain_score:53.1 name:PBP_dimer; db:Pfam-A.hmm|PF00905.22 evalue:3.4e-65 score:219.5 best_domain_score:219.2 name:Transpeptidase;
105177 104824 CDS
ID metaerg.pl|02313
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90184.1 1 91 evalue:1.6e-11 qcov:77.80 identity:49.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
sp YES;
tm_num 1;
104824 104919 signal_peptide
ID metaerg.pl|02314
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
105177 104824 transmembrane_helix
ID metaerg.pl|02315
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology o104836-104904i;
106175 105174 CDS
ID metaerg.pl|02316
allec_ids 2.1.1.199;
allgo_ids GO:0008168; GO:0005737; GO:0071424; GO:0070475;
allko_ids K03438;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90183.1 33 333 evalue:2.8e-82 qcov:90.40 identity:57.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01795;
pfam_desc MraW methylase family;
pfam_id Methyltransf_5;
pfam_target db:Pfam-A.hmm|PF01795.19 evalue:1e-90 score:303.6 best_domain_score:303.5 name:Methyltransf_5;
sprot_desc Ribosomal RNA small subunit methyltransferase H;
sprot_id sp|C1A8A2|RSMH_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A8A2|RSMH_GEMAT 28 332 evalue:1.4e-67 qcov:91.60 identity:47.90;
tigrfam_acc TIGR00006;
tigrfam_desc 16S rRNA (cytosine(1402)-N(4))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00006;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00006 evalue:7.1e-80 score:267.9 best_domain_score:267.7 name:TIGR00006;
106629 106189 CDS
ID metaerg.pl|02317
allgo_ids GO:0005737; GO:0009295; GO:0003677; GO:0003700;
allko_ids K03925;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000029.1_88 1 146 evalue:3.5e-37 qcov:100.00 identity:52.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF02381;
pfam_desc MraZ protein, putative antitoxin-like;
pfam_id MraZ;
pfam_target db:Pfam-A.hmm|PF02381.18 evalue:1.9e-23 score:81.5 best_domain_score:41.5 name:MraZ;
sprot_desc Transcriptional regulator MraZ;
sprot_id sp|B0K8J8|MRAZ_THEP3;
sprot_target db:uniprot_sprot|sp|B0K8J8|MRAZ_THEP3 5 139 evalue:7.8e-15 qcov:92.50 identity:34.10;
108611 106863 CDS
ID metaerg.pl|02318
allgo_ids GO:0005515;
allko_ids K01768; K09571; K05864; K08884; K01802;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002348465;
genomedb_acc GCA_002348465.1;
genomedb_target db:genomedb|GCA_002348465.1|DEBI01000114.1_19 1 581 evalue:1.3e-101 qcov:99.80 identity:37.00;
kegg_pathway_id 04020; 00230; 05012;
kegg_pathway_name Calcium signaling pathway; Purine metabolism; Parkinson's disease;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF00515; PF13414; PF13424; PF13428; PF13429; PF13432; PF13431; PF14559; PF07719; PF13174; PF13176; PF13181; PF13371;
pfam_desc Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_11; TPR_12; TPR_14; TPR_15; TPR_16; TPR_17; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8; TPR_9;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:3.7e-20 score:70.1 best_domain_score:20.1 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:6.2e-10 score:37.8 best_domain_score:21.3 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:7.5e-13 score:47.8 best_domain_score:20.0 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:4.8e-24 score:82.2 best_domain_score:18.1 name:TPR_14; db:Pfam-A.hmm|PF13429.6 evalue:2.4e-07 score:29.5 best_domain_score:20.6 name:TPR_15; db:Pfam-A.hmm|PF13432.6 evalue:2.2e-17 score:62.6 best_domain_score:27.5 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:7.1e-09 score:34.7 best_domain_score:7.9 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:2.6e-17 score:62.3 best_domain_score:24.3 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:1.5e-21 score:74.0 best_domain_score:20.3 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:1.9e-07 score:30.5 best_domain_score:15.7 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:2e-10 score:39.2 best_domain_score:13.6 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:1.1e-16 score:58.8 best_domain_score:21.0 name:TPR_8; db:Pfam-A.hmm|PF13371.6 evalue:1.4e-14 score:53.2 best_domain_score:35.1 name:TPR_9;
sp YES;
106863 106955 signal_peptide
ID metaerg.pl|02319
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
109318 108809 CDS
ID metaerg.pl|02320
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000014.1_65 23 161 evalue:7.7e-36 qcov:82.20 identity:59.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF03061; PF13279;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily;
pfam_id 4HBT; 4HBT_2;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:6.8e-11 score:41.6 best_domain_score:41.6 name:4HBT; db:Pfam-A.hmm|PF13279.6 evalue:2.7e-12 score:46.5 best_domain_score:46.2 name:4HBT_2;
109482 110591 CDS
ID metaerg.pl|02321
allec_ids 1.4.3.19; 2.8.1.10;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0050660; GO:0043799; GO:0016783; GO:0009228; GO:0009229;
allko_ids K00285; K03149;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000004.1_30 1 353 evalue:8.6e-64 qcov:95.70 identity:43.50;
kegg_pathway_id 00360; 00730; 00910;
kegg_pathway_name Phenylalanine metabolism; Thiamine metabolism; Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01266; PF00890;
pfam_desc FAD dependent oxidoreductase; FAD binding domain;
pfam_id DAO; FAD_binding_2;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:1.4e-52 score:178.7 best_domain_score:178.5 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:2e-05 score:23.1 best_domain_score:19.8 name:FAD_binding_2;
sp YES;
sprot_desc Bifunctional protein ThiO/ThiG;
sprot_id sp|Q55710|THIOG_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55710|THIOG_SYNY3 1 353 evalue:1.2e-40 qcov:95.70 identity:36.20;
tigrfam_acc TIGR02352;
tigrfam_desc glycine oxidase ThiO;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name thiamin_ThiO;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR02352 evalue:1e-78 score:264.1 best_domain_score:263.9 name:TIGR02352;
109482 109601 signal_peptide
ID metaerg.pl|02322
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
110595 111254 CDS
ID metaerg.pl|02323
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-320;s__SZUA-320 sp003246755;
genomedb_acc GCA_003246755.1;
genomedb_target db:genomedb|GCA_003246755.1|QKDC01000029.1_2 51 215 evalue:1.2e-36 qcov:75.30 identity:46.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF11138;
pfam_desc Protein of unknown function (DUF2911);
pfam_id DUF2911;
pfam_target db:Pfam-A.hmm|PF11138.8 evalue:3e-33 score:113.9 best_domain_score:113.7 name:DUF2911;
sp YES;
110595 110681 signal_peptide
ID metaerg.pl|02324
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
111461 112315 CDS
ID metaerg.pl|02325
allec_ids 3.1.4.46;
allgo_ids GO:0006629; GO:0008081; GO:0008889; GO:0046872; GO:0006071;
allko_ids K01126;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25436.1 5 261 evalue:1.3e-46 qcov:90.50 identity:43.20;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PWY0-381;
metacyc_pathway_name glycerol and glycerophosphodiester degradation;;
metacyc_pathway_type GLYCEROL-DEG; Super-Pathways;;
pfam_acc PF03009;
pfam_desc Glycerophosphoryl diester phosphodiesterase family;
pfam_id GDPD;
pfam_target db:Pfam-A.hmm|PF03009.17 evalue:3e-30 score:105.0 best_domain_score:104.6 name:GDPD;
sprot_desc Glycerophosphodiester phosphodiesterase;
sprot_id sp|P37965|GLPQ_BACSU;
sprot_target db:uniprot_sprot|sp|P37965|GLPQ_BACSU 24 257 evalue:9.5e-17 qcov:82.40 identity:29.80;
112405 113553 CDS
ID metaerg.pl|02326
allec_ids 7.6.2.11;
allgo_ids GO:0005524; GO:0016887; GO:0043190; GO:0015594; GO:0015595;
allko_ids K02003; K01997; K05847; K02010; K02052; K02006; K11084; K02017; K02032; K01996; K06861; K02071; K10199; K02062; K02028; K11072; K02045; K01995; K02065; K02049; K02031; K01998; K10111; K10112; K06857; K05816; K10235; K11076; K01990; K10243; K02018; K02023; K10000; K10230; K02000; K11962;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25435.1 2 362 evalue:7.6e-148 qcov:94.50 identity:69.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF00005; PF08402;
pfam_desc ABC transporter; TOBE domain;
pfam_id ABC_tran; TOBE_2;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:2.4e-32 score:111.6 best_domain_score:111.1 name:ABC_tran; db:Pfam-A.hmm|PF08402.10 evalue:6.1e-08 score:32.0 best_domain_score:29.3 name:TOBE_2;
sprot_desc Spermidine/putrescine import ATP-binding protein PotA;
sprot_id sp|Q47T99|POTA_THEFY;
sprot_target db:uniprot_sprot|sp|Q47T99|POTA_THEFY 6 309 evalue:1.2e-67 qcov:79.60 identity:43.90;
115142 113481 CDS
ID metaerg.pl|02327
allgo_ids GO:0015321; GO:0016020; GO:0044341; GO:0016021; GO:0005886; GO:0005315; GO:0035435;
allko_ids K03324;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2979;f__UBA2979;g__W-Chloroflexi-9;s__W-Chloroflexi-9 sp002840675;
genomedb_acc GCA_002840675.1;
genomedb_target db:genomedb|GCA_002840675.1|PKN81333.1 1 510 evalue:8.5e-116 qcov:92.20 identity:51.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF02690;
pfam_desc Na+/Pi-cotransporter;
pfam_id Na_Pi_cotrans;
pfam_target db:Pfam-A.hmm|PF02690.15 evalue:2.2e-51 score:172.8 best_domain_score:137.6 name:Na_Pi_cotrans;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P0AF43|YJBB_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AF43|YJBB_ECOLI 2 471 evalue:2.6e-18 qcov:85.00 identity:27.20;
tigrfam_acc TIGR00704;
tigrfam_desc Na/Pi-cotransporter II-related protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name NaPi_cotrn_rel;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR00704 evalue:2.7e-63 score:213.6 best_domain_score:213.3 name:TIGR00704;
tm_num 8;
113481 113561 signal_peptide
ID metaerg.pl|02328
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
115142 113481 transmembrane_helix
ID metaerg.pl|02329
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i113484-113537o113634-113702i113721-113789o113802-113855i113874-113927o113970-114038i114219-114287o114315-114374i;
116023 115139 CDS
ID metaerg.pl|02330
allgo_ids GO:0003824; GO:0050662; GO:0005524;
genomedb_OC d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__CSP1-5;g__CSP1-5;s__CSP1-5 sp001443495;
genomedb_acc GCA_001443495.1;
genomedb_target db:genomedb|GCA_001443495.1|KRT70808.1 15 294 evalue:9.9e-71 qcov:95.20 identity:50.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01370;
pfam_desc NAD dependent epimerase/dehydratase family;
pfam_id Epimerase;
pfam_target db:Pfam-A.hmm|PF01370.21 evalue:7.7e-07 score:28.0 best_domain_score:25.6 name:Epimerase;
sprot_desc hypothetical protein;
sprot_id sp|P0AD13|YEEZ_ECO57;
sprot_target db:uniprot_sprot|sp|P0AD13|YEEZ_ECO57 14 279 evalue:2.9e-13 qcov:90.50 identity:29.60;
116460 116020 CDS
ID metaerg.pl|02331
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
sp YES;
116020 116100 lipoprotein_signal_peptide
ID metaerg.pl|02332
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
116679 116604 tRNA
ID metaerg.pl|02333
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
name tRNA_Val_tac;
116963 116688 CDS
ID metaerg.pl|02334
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
tm_num 2;
116963 116688 transmembrane_helix
ID metaerg.pl|02335
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology o116814-116882i116901-116957o;
118132 117044 CDS
ID metaerg.pl|02336
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000014.1_19 37 360 evalue:1.6e-78 qcov:89.50 identity:47.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
sp YES;
tm_num 2;
117044 117202 signal_peptide
ID metaerg.pl|02337
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
118132 117044 transmembrane_helix
ID metaerg.pl|02338
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i117104-117172o117971-118039i;
119757 118129 CDS
ID metaerg.pl|02339
allgo_ids GO:0005515;
allko_ids K01802; K09667; K05864; K03040; K08884; K09571;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000324.1_10 1 534 evalue:1.8e-139 qcov:98.50 identity:51.60;
kegg_pathway_id 04020; 03020; 01030; 05012;
kegg_pathway_name Calcium signaling pathway; RNA polymerase; Glycan structures - biosynthesis 1; Parkinson's disease;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF14332; PF00515; PF13414; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF13174; PF13176; PF13181;
pfam_desc Domain of unknown function (DUF4388); Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id DUF4388; TPR_1; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8;
pfam_target db:Pfam-A.hmm|PF14332.6 evalue:6e-28 score:96.2 best_domain_score:94.3 name:DUF4388; db:Pfam-A.hmm|PF00515.28 evalue:8.4e-23 score:78.4 best_domain_score:28.0 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:2.2e-11 score:42.5 best_domain_score:21.3 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:4.1e-16 score:58.3 best_domain_score:16.1 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:9.9e-17 score:59.5 best_domain_score:17.1 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:8.3e-15 score:54.4 best_domain_score:30.9 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:2.8e-10 score:39.1 best_domain_score:14.9 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:2.7e-13 score:49.4 best_domain_score:15.6 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:2.7e-27 score:91.9 best_domain_score:29.3 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:1.3e-07 score:31.0 best_domain_score:12.8 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:2.3e-07 score:29.6 best_domain_score:7.8 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:1.7e-12 score:45.7 best_domain_score:14.9 name:TPR_8;
121618 119777 CDS
ID metaerg.pl|02340
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000324.1_11 14 612 evalue:5.6e-161 qcov:97.70 identity:53.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF00004; PF00308; PF01695;
pfam_desc ATPase family associated with various cellular activities (AAA); Bacterial dnaA protein; IstB-like ATP binding protein;
pfam_id AAA; Bac_DnaA; IstB_IS21;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:2e-05 score:24.2 best_domain_score:15.1 name:AAA; db:Pfam-A.hmm|PF00308.18 evalue:2e-92 score:308.2 best_domain_score:212.3 name:Bac_DnaA; db:Pfam-A.hmm|PF01695.17 evalue:1.8e-11 score:43.3 best_domain_score:40.1 name:IstB_IS21;
122034 121615 CDS
ID metaerg.pl|02341
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF03259;
pfam_desc Roadblock/LC7 domain;
pfam_id Robl_LC7;
pfam_target db:Pfam-A.hmm|PF03259.17 evalue:7.1e-09 score:34.6 best_domain_score:34.2 name:Robl_LC7;
123017 122031 CDS
ID metaerg.pl|02342
allec_ids 5.4.99.-;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0000455;
allko_ids K06180;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000018.1_7 7 321 evalue:3.6e-106 qcov:96.00 identity:61.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id PWY-6115; PWY-5377; PWY-112; RIBOKIN-PWY; PWY-6005; PWY-5992; PWY-5203; PWY-6109; PWY-6008; PWY-5672;
metacyc_pathway_name ; α-amyrin biosynthesis;; lupeol biosynthesis;; ribose phosphorylation;; marneral biosynthesis;; thalianol and derivatives biosynthesis;; soybean saponin I biosynthesis;; mangrove triterpenoid biosynthesis;; baruol biosynthesis;; ginsenosides biosynthesis;;
metacyc_pathway_type ; TRITERPENOID-SYN;; TRITERPENOID-SYN;; Sugars-And-Polysaccharides-Degradation;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;;
pfam_acc PF00849;
pfam_desc RNA pseudouridylate synthase;
pfam_id PseudoU_synth_2;
pfam_target db:Pfam-A.hmm|PF00849.22 evalue:1.6e-27 score:95.8 best_domain_score:95.3 name:PseudoU_synth_2;
sprot_desc Uncharacterized RNA pseudouridine synthase YlyB;
sprot_id sp|Q45480|YLYB_BACSU;
sprot_target db:uniprot_sprot|sp|Q45480|YLYB_BACSU 6 312 evalue:2.7e-60 qcov:93.60 identity:43.20;
tigrfam_acc TIGR00005;
tigrfam_desc pseudouridine synthase, RluA family;
tigrfam_mainrole Protein synthesis;
tigrfam_name rluA_subfam;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00005 evalue:3.2e-83 score:278.6 best_domain_score:278.3 name:TIGR00005;
126268 123050 CDS
ID metaerg.pl|02343
allec_ids 6.1.1.5;
allgo_ids GO:0004812; GO:0006418; GO:0005737; GO:0002161; GO:0005524; GO:0004822; GO:0000049; GO:0008270; GO:0006428;
allko_ids K01870;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000324.1_13 1 1067 evalue:0.0e+00 qcov:99.50 identity:65.30;
kegg_pathway_id 00290; 00970;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF08264; PF00133; PF09334;
pfam_desc Anticodon-binding domain of tRNA; tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M);
pfam_id Anticodon_1; tRNA-synt_1; tRNA-synt_1g;
pfam_target db:Pfam-A.hmm|PF08264.13 evalue:5.9e-28 score:97.0 best_domain_score:96.3 name:Anticodon_1; db:Pfam-A.hmm|PF00133.22 evalue:5.9e-174 score:578.9 best_domain_score:578.0 name:tRNA-synt_1; db:Pfam-A.hmm|PF09334.11 evalue:5.2e-21 score:74.1 best_domain_score:33.6 name:tRNA-synt_1g;
sprot_desc Isoleucine--tRNA ligase;
sprot_id sp|P56690|SYI_THET8;
sprot_target db:uniprot_sprot|sp|P56690|SYI_THET8 9 1043 evalue:3.7e-255 qcov:96.50 identity:45.30;
tigrfam_acc TIGR00392;
tigrfam_desc isoleucine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name ileS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00392 evalue:2.4e-261 score:868.8 best_domain_score:868.4 name:TIGR00392;
127152 126364 CDS
ID metaerg.pl|02344
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04830.1 1 241 evalue:1.9e-33 qcov:92.00 identity:45.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF05103;
pfam_desc DivIVA protein;
pfam_id DivIVA;
pfam_target db:Pfam-A.hmm|PF05103.13 evalue:1.7e-28 score:98.5 best_domain_score:95.8 name:DivIVA;
tigrfam_acc TIGR03544;
tigrfam_desc DivIVA domain;
tigrfam_name DivI1A_domain;
tigrfam_target db:TIGRFAMs.hmm|TIGR03544 evalue:1.7e-11 score:42.7 best_domain_score:41.6 name:TIGR03544;
127850 127149 CDS
ID metaerg.pl|02345
allgo_ids GO:0030170;
allko_ids K06997;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000014.1_15 1 231 evalue:1.5e-61 qcov:99.10 identity:57.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01168;
pfam_desc Alanine racemase, N-terminal domain;
pfam_id Ala_racemase_N;
pfam_target db:Pfam-A.hmm|PF01168.20 evalue:1e-25 score:89.9 best_domain_score:89.7 name:Ala_racemase_N;
sprot_desc Pyridoxal phosphate homeostasis protein;
sprot_id sp|P24562|PLPHP_PSEAE;
sprot_target db:uniprot_sprot|sp|P24562|PLPHP_PSEAE 12 232 evalue:3.5e-33 qcov:94.80 identity:38.90;
tigrfam_acc TIGR00044;
tigrfam_desc pyridoxal phosphate enzyme, YggS family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00044;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00044 evalue:7.5e-54 score:181.9 best_domain_score:181.7 name:TIGR00044;
128708 128013 CDS
ID metaerg.pl|02346
allgo_ids GO:0055085;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002313925;
genomedb_acc GCA_002313925.1;
genomedb_target db:genomedb|GCA_002313925.1|DCAZ01000018.1_18 9 231 evalue:1.0e-75 qcov:96.50 identity:62.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF03544;
pfam_desc Gram-negative bacterial TonB protein C-terminal;
pfam_id TonB_C;
pfam_target db:Pfam-A.hmm|PF03544.14 evalue:7.7e-16 score:57.6 best_domain_score:56.8 name:TonB_C;
tigrfam_acc TIGR01352;
tigrfam_desc TonB family C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name tonB_Cterm;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01352 evalue:1e-14 score:53.7 best_domain_score:52.9 name:TIGR01352;
tm_num 1;
128708 128013 transmembrane_helix
ID metaerg.pl|02347
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i128097-128165o;
129154 128705 CDS
ID metaerg.pl|02348
allgo_ids GO:0022857; GO:0055085;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000014.1_13 1 149 evalue:7.0e-41 qcov:100.00 identity:60.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF02472;
pfam_desc Biopolymer transport protein ExbD/TolR;
pfam_id ExbD;
pfam_target db:Pfam-A.hmm|PF02472.16 evalue:2.1e-23 score:82.1 best_domain_score:81.9 name:ExbD;
tm_num 1;
129154 128705 transmembrane_helix
ID metaerg.pl|02349
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i128765-128824o;
129583 129158 CDS
ID metaerg.pl|02350
allgo_ids GO:0022857; GO:0055085;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000324.1_19 1 139 evalue:4.5e-45 qcov:98.60 identity:69.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF02472;
pfam_desc Biopolymer transport protein ExbD/TolR;
pfam_id ExbD;
pfam_target db:Pfam-A.hmm|PF02472.16 evalue:8.3e-19 score:67.3 best_domain_score:67.1 name:ExbD;
tm_num 1;
129583 129158 transmembrane_helix
ID metaerg.pl|02351
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology i129194-129262o;
130484 129693 CDS
ID metaerg.pl|02352
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA6934;s__UBA6934 sp002346625;
genomedb_acc GCA_002346625.1;
genomedb_target db:genomedb|GCA_002346625.1|DEAF01000001.1_81 8 213 evalue:8.5e-82 qcov:78.30 identity:79.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01618;
pfam_desc MotA/TolQ/ExbB proton channel family;
pfam_id MotA_ExbB;
pfam_target db:Pfam-A.hmm|PF01618.16 evalue:7.7e-30 score:102.5 best_domain_score:101.6 name:MotA_ExbB;
tm_num 3;
130484 129693 transmembrane_helix
ID metaerg.pl|02353
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology o129750-129818i130065-130133o130191-130259i;
131432 130629 CDS
ID metaerg.pl|02354
allec_ids 2.7.7.85;
allgo_ids GO:0016021; GO:0005886; GO:0004016; GO:0005524; GO:0016779; GO:0006171; GO:0019932;
allko_ids K18672;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000324.1_21 2 262 evalue:2.2e-85 qcov:97.80 identity:64.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF02457;
pfam_desc DisA bacterial checkpoint controller nucleotide-binding;
pfam_id DisA_N;
pfam_target db:Pfam-A.hmm|PF02457.16 evalue:1.8e-40 score:136.4 best_domain_score:135.8 name:DisA_N;
sprot_desc Diadenylate cyclase;
sprot_id sp|A0A0H3GM48|DACA_LISM4;
sprot_target db:uniprot_sprot|sp|A0A0H3GM48|DACA_LISM4 17 250 evalue:1.2e-45 qcov:87.60 identity:39.20;
tigrfam_acc TIGR00159;
tigrfam_desc TIGR00159 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00159;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00159 evalue:1.1e-65 score:220.7 best_domain_score:220.4 name:TIGR00159;
tm_num 2;
131432 130629 transmembrane_helix
ID metaerg.pl|02355
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology o130671-130739i130758-130826o;
133620 131470 CDS
ID metaerg.pl|02356
allec_ids 3.4.24.-;
allgo_ids GO:0005524; GO:0016021; GO:0005886; GO:0016887; GO:0004222; GO:0008270; GO:0030163;
allko_ids K01509; K00733; K13254; K07767; K03798;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000324.1_23 1 687 evalue:2.1e-255 qcov:95.90 identity:67.80;
kegg_pathway_id 00230; 01030;
kegg_pathway_name Purine metabolism; Glycan structures - biosynthesis 1;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF00004; PF07728; PF17862; PF01434; PF05496;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); AAA+ lid domain; Peptidase family M41; Holliday junction DNA helicase RuvB P-loop domain;
pfam_id AAA; AAA_5; AAA_lid_3; Peptidase_M41; RuvB_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:6.7e-45 score:152.0 best_domain_score:150.3 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:6.4e-08 score:31.9 best_domain_score:26.1 name:AAA_5; db:Pfam-A.hmm|PF17862.1 evalue:1.2e-13 score:49.8 best_domain_score:48.8 name:AAA_lid_3; db:Pfam-A.hmm|PF01434.18 evalue:8.3e-73 score:243.5 best_domain_score:242.9 name:Peptidase_M41; db:Pfam-A.hmm|PF05496.12 evalue:7.3e-05 score:21.8 best_domain_score:17.9 name:RuvB_N;
sprot_desc ATP-dependent zinc metalloprotease FtsH;
sprot_id sp|C1F8X6|FTSH_ACIC5;
sprot_target db:uniprot_sprot|sp|C1F8X6|FTSH_ACIC5 21 625 evalue:2.1e-190 qcov:84.50 identity:55.80;
tigrfam_acc TIGR01241;
tigrfam_desc ATP-dependent metallopeptidase HflB;
tigrfam_mainrole Protein fate;
tigrfam_name FtsH_fam;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01241 evalue:3.1e-230 score:764.2 best_domain_score:763.9 name:TIGR01241;
tm_num 2;
133620 131470 transmembrane_helix
ID metaerg.pl|02357
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
topology o131536-131589i131839-131907o;
134224 133667 CDS
ID metaerg.pl|02358
allec_ids 2.4.2.8;
allgo_ids GO:0009116; GO:0005737; GO:0052657; GO:0004422; GO:0046872; GO:0000166; GO:0032264; GO:0006166;
allko_ids K00762; K00760;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__AG41;s__AG41 sp003220855;
genomedb_acc GCA_003220855.1;
genomedb_target db:genomedb|GCA_003220855.1|PYO29036.1 11 185 evalue:2.4e-59 qcov:94.60 identity:65.90;
kegg_pathway_id 00240; 00230; 00983;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Drug metabolism - other enzymes;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
metacyc_pathway_id P121-PWY; SALVADEHYPOX-PWY; PWY-6579; SALVPURINE2-PWY; P1-PWY;
metacyc_pathway_name adenine and adenosine salvage I;; adenosine nucleotides degradation II;; superpathway of guanine and guanosine salvage;; xanthine and xanthosine salvage;; ;
metacyc_pathway_type Adenine-Adenosine-Salvage;; Adenosine-Nucleotides-Degradation;; Guanine-Guanosine-Salvage; Super-Pathways;; Purine-Nucleotides-Salvage;; ;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:2e-20 score:72.1 best_domain_score:71.9 name:Pribosyltran;
sprot_desc Hypoxanthine-guanine phosphoribosyltransferase;
sprot_id sp|P37171|HPRT_RHOCB;
sprot_target db:uniprot_sprot|sp|P37171|HPRT_RHOCB 22 185 evalue:2.7e-44 qcov:88.60 identity:51.50;
tigrfam_acc TIGR01203;
tigrfam_desc hypoxanthine phosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name HGPRTase;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01203 evalue:1.1e-55 score:187.0 best_domain_score:186.9 name:TIGR01203;
135752 134205 CDS
ID metaerg.pl|02359
allec_ids 6.3.4.19; 6.3.4.-;
allgo_ids GO:0000166; GO:0005524; GO:0005737; GO:0008033; GO:0016879; GO:0006400;
allko_ids K04075;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90143.1 42 491 evalue:2.0e-74 qcov:87.40 identity:44.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF01171; PF11734;
pfam_desc PP-loop family; TilS substrate C-terminal domain;
pfam_id ATP_bind_3; TilS_C;
pfam_target db:Pfam-A.hmm|PF01171.20 evalue:2.7e-48 score:163.4 best_domain_score:163.0 name:ATP_bind_3; db:Pfam-A.hmm|PF11734.8 evalue:7.4e-10 score:37.4 best_domain_score:35.8 name:TilS_C;
sprot_desc tRNA(Ile)-lysidine synthase;
sprot_id sp|Q5L3T3|TILS_GEOKA;
sprot_target db:uniprot_sprot|sp|Q5L3T3|TILS_GEOKA 40 496 evalue:6.3e-35 qcov:88.70 identity:30.00;
tigrfam_acc TIGR02432;
tigrfam_desc tRNA(Ile)-lysidine synthetase;
tigrfam_mainrole Protein synthesis;
tigrfam_name lysidine_TilS_N;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR02432 evalue:3e-49 score:166.7 best_domain_score:166.3 name:TIGR02432;
136078 135749 CDS
ID metaerg.pl|02360
allgo_ids GO:0006629; GO:0008081;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000324.1_26 1 107 evalue:2.8e-39 qcov:98.20 identity:72.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.175127; 36.0916; 0.90746; 0.0558376; 37.23;
pfam_acc PF03009; PF13653;
pfam_desc Glycerophosphoryl diester phosphodiesterase family; Glycerophosphoryl diester phosphodiesterase family;
pfam_id GDPD; GDPD_2;
pfam_target db:Pfam-A.hmm|PF03009.17 evalue:1.4e-12 score:47.2 best_domain_score:47.2 name:GDPD; db:Pfam-A.hmm|PF13653.6 evalue:1.2e-08 score:34.4 best_domain_score:34.4 name:GDPD_2;
>Feature NODE_11_length_135388_cov_46.012
3 203 CDS
ID metaerg.pl|02361
allgo_ids GO:0003676; GO:0003723;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092955.1 1 66 evalue:3.1e-25 qcov:100.00 identity:98.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00076;
pfam_desc RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);
pfam_id RRM_1;
pfam_target db:Pfam-A.hmm|PF00076.22 evalue:1.1e-05 score:24.4 best_domain_score:24.0 name:RRM_1;
sprot_desc Putative RNA-binding protein RbpF;
sprot_id sp|Q9WX39|RBPF_NOSS1;
sprot_target db:uniprot_sprot|sp|Q9WX39|RBPF_NOSS1 1 48 evalue:2.2e-17 qcov:72.70 identity:87.50;
502 2550 CDS
ID metaerg.pl|02362
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092954.1 1 682 evalue:0.0e+00 qcov:100.00 identity:94.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF12831;
pfam_desc FAD dependent oxidoreductase;
pfam_id FAD_oxidored;
pfam_target db:Pfam-A.hmm|PF12831.7 evalue:3.6e-56 score:190.6 best_domain_score:95.7 name:FAD_oxidored;
sp YES;
tm_num 1;
502 597 signal_peptide
ID metaerg.pl|02363
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
502 2550 transmembrane_helix
ID metaerg.pl|02364
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology i520-579o;
2728 3054 CDS
ID metaerg.pl|02365
allgo_ids GO:0030163; GO:0006508;
allko_ids K06891;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196047.1 1 108 evalue:5.8e-53 qcov:100.00 identity:94.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF02617;
pfam_desc ATP-dependent Clp protease adaptor protein ClpS;
pfam_id ClpS;
pfam_target db:Pfam-A.hmm|PF02617.17 evalue:1.1e-19 score:69.2 best_domain_score:69.0 name:ClpS;
sprot_desc ATP-dependent Clp protease adapter protein ClpS;
sprot_id sp|Q8YZQ3|CLPS_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YZQ3|CLPS_NOSS1 13 108 evalue:7.4e-47 qcov:88.90 identity:87.50;
3060 3380 CDS
ID metaerg.pl|02366
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196048.1 1 106 evalue:5.7e-53 qcov:100.00 identity:98.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF09876;
pfam_desc Predicted metal-binding protein (DUF2103);
pfam_id DUF2103;
pfam_target db:Pfam-A.hmm|PF09876.9 evalue:4e-25 score:86.9 best_domain_score:86.7 name:DUF2103;
3740 3420 CDS
ID metaerg.pl|02367
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092951.1 4 106 evalue:4.1e-51 qcov:97.20 identity:97.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
tm_num 3;
3740 3420 transmembrane_helix
ID metaerg.pl|02368
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology o3447-3503i3564-3617o3630-3698i;
4293 4039 CDS
ID metaerg.pl|02369
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc commune;
genomedb_acc GCF_003113895.1;
genomedb_target db:genomedb|GCF_003113895.1|WP_109007431.1 1 84 evalue:1.2e-34 qcov:100.00 identity:92.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF02604;
pfam_desc Antitoxin Phd_YefM, type II toxin-antitoxin system;
pfam_id PhdYeFM_antitox;
pfam_target db:Pfam-A.hmm|PF02604.19 evalue:6.9e-23 score:79.5 best_domain_score:79.3 name:PhdYeFM_antitox;
sprot_desc Antitoxin YefM;
sprot_id sp|P58235|YEFM_SYNY3;
sprot_target db:uniprot_sprot|sp|P58235|YEFM_SYNY3 1 83 evalue:2.1e-09 qcov:98.80 identity:36.10;
tigrfam_acc TIGR01552;
tigrfam_desc prevent-host-death family protein;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name phd_fam;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01552 evalue:1.7e-08 score:32.9 best_domain_score:32.4 name:TIGR01552;
4948 4520 CDS
ID metaerg.pl|02370
allec_ids 3.1.-.-;
allgo_ids GO:0003677; GO:0000287; GO:0004540; GO:0044001;
allko_ids K07062;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Dolichospermum_A;s__Dolichospermum_A compactum;
genomedb_acc GCF_002368115.1;
genomedb_target db:genomedb|GCF_002368115.1|WP_096663765.1 1 142 evalue:2.4e-70 qcov:100.00 identity:95.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01850;
pfam_desc PIN domain;
pfam_id PIN;
pfam_target db:Pfam-A.hmm|PF01850.21 evalue:8.8e-13 score:48.1 best_domain_score:47.7 name:PIN;
sprot_desc Toxin FitB;
sprot_id sp|Q5F882|FITB_NEIG1;
sprot_target db:uniprot_sprot|sp|Q5F882|FITB_NEIG1 4 139 evalue:1.3e-14 qcov:95.80 identity:31.90;
5175 4945 CDS
ID metaerg.pl|02371
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Dolichospermum_A;s__Dolichospermum_A compactum;
genomedb_acc GCF_002368115.1;
genomedb_target db:genomedb|GCF_002368115.1|WP_096663762.1 1 76 evalue:4.4e-31 qcov:100.00 identity:97.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF09957;
pfam_desc Bacterial antitoxin of type II TA system, VapB;
pfam_id VapB_antitoxin;
pfam_target db:Pfam-A.hmm|PF09957.9 evalue:2.3e-06 score:26.7 best_domain_score:26.2 name:VapB_antitoxin;
5841 5371 CDS
ID metaerg.pl|02372
allec_ids 2.8.1.12;
allgo_ids GO:0006777; GO:0030366;
allko_ids K03635;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196052.1 1 156 evalue:6.0e-83 qcov:100.00 identity:99.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF02391;
pfam_desc MoaE protein;
pfam_id MoaE;
pfam_target db:Pfam-A.hmm|PF02391.17 evalue:3.5e-39 score:132.8 best_domain_score:132.6 name:MoaE;
sprot_desc Molybdopterin synthase catalytic subunit;
sprot_id sp|Q8YWH5|MOAE_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YWH5|MOAE_NOSS1 1 155 evalue:3.1e-70 qcov:99.40 identity:81.90;
6824 5883 CDS
ID metaerg.pl|02373
allec_ids 1.1.1.169; 1.1.1.-;
allgo_ids GO:0005737; GO:0008677; GO:0015940;
allko_ids K00077;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196053.1 3 312 evalue:7.1e-168 qcov:99.00 identity:94.20;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PWY-5327; PWY-882; PWY-481; PWY-5789; PWY-5048; ECASYN-PWY; TOLSULFDEG-PWY; PWY-6577; LYSDEGII-PWY; CENTBENZCOA-PWY; 4TOLCARBDEG-PWY; PWY-321; PWY-6516; PWY1A0-6325; PWY-1186; SUCROSEUTIL2-PWY; PWY-6419; PWY-5392; PWY-5516; P302-PWY; PWY-5184; PWY-5197; PANTOSYN-PWY; BENZCOA-PWY; PWY-6501; PWY-6575; PANTO-PWY; PWY-5466; PWY-4221; PWY-5972; PWY-5195;
metacyc_pathway_name superpathway of L-lysine degradation;; L-ascorbate biosynthesis I (L-galactose pathway);; ethylbenzene degradation (anaerobic);; 3-hydroxypropanoate/4-hydroxybutanate cycle;; rosmarinic acid biosynthesis I;; enterobacterial common antigen biosynthesis;; 4-toluenesulfonate degradation I;; farnesylcysteine salvage pathway;; L-lysine degradation III;; benzoyl-CoA degradation II (anaerobic);; 4-toluenecarboxylate degradation;; cutin biosynthesis;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; actinorhodin biosynthesis;; L-homomethionine biosynthesis;; sucrose degradation VII (sucrose 3-dehydrogenase);; shikimate degradation II;; reductive TCA cycle II;; D-xylose degradation II;; L-sorbose degradation;; toluene degradation VI (anaerobic);; lactate biosynthesis (archaea);; superpathway of coenzyme A biosynthesis I (bacteria);; anaerobic aromatic compound degradation (Thauera aromatica);; D-glucuronate degradation II;; juvenile hormone III biosynthesis I;; phosphopantothenate biosynthesis I;; matairesinol biosynthesis;; superpathway of coenzyme A biosynthesis II (plants);; stearate biosynthesis I (animals and fungi);; artemisinin and arteannuin B biosynthesis;;
metacyc_pathway_type LYSINE-DEG; Super-Pathways;; Ascorbate-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Autotrophic-CO2-Fixation;; Rosmarinate-Biosynthesis;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; 4-Toluenesulfonate-Degradation;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; LYSINE-DEG;; Benzoyl-CoA-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; Sugar-Derivatives; Super-Pathways;; Antibiotic-Biosynthesis;; Other-Amino-Acid-Biosynthesis;; SUCROSE-DEG;; Shikimate-Degradation;; Reductive-TCA-Cycles;; Xylose-Degradation;; Sugars-And-Polysaccharides-Degradation;; Super-Pathways; TOLUENE-DEG;; Energy-Metabolism;; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; D-Glucuronate-Degradation;; HORMONE-SYN; JH-III-Biosynthesis;; Pantothenate-Biosynthesis;; LIGNAN-SYN;; CoA-Biosynthesis; Super-Pathways;; Stearate-Biosynthesis;; SESQUITERPENE-LACTONE;;
pfam_acc PF02558; PF08546;
pfam_desc Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal;
pfam_id ApbA; ApbA_C;
pfam_target db:Pfam-A.hmm|PF02558.16 evalue:5.6e-38 score:129.2 best_domain_score:128.7 name:ApbA; db:Pfam-A.hmm|PF08546.11 evalue:3.6e-27 score:94.3 best_domain_score:93.7 name:ApbA_C;
sprot_desc Putative 2-dehydropantoate 2-reductase;
sprot_id sp|Q8YX96|PANE_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YX96|PANE_NOSS1 1 310 evalue:7.4e-140 qcov:99.00 identity:79.40;
tigrfam_acc TIGR00745;
tigrfam_desc 2-dehydropantoate 2-reductase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name apbA_panE;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00745 evalue:2e-84 score:282.6 best_domain_score:282.4 name:TIGR00745;
7169 7504 CDS
ID metaerg.pl|02374
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092945.1 1 111 evalue:1.1e-43 qcov:100.00 identity:84.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
tm_num 3;
7169 7504 transmembrane_helix
ID metaerg.pl|02375
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology o7211-7279i7313-7381o7391-7459i;
11393 7725 CDS
ID metaerg.pl|02376
allgo_ids GO:0005515;
allko_ids K09571; K01768; K00568; K01802; K09667; K01090; K04460; K09574; K05864; K03040; K08884;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092944.1 1 1221 evalue:0.0e+00 qcov:99.90 identity:82.20;
kegg_pathway_id 04010; 05012; 00130; 01030; 00230; 04020; 03020;
kegg_pathway_name MAPK signaling pathway; Parkinson's disease; Ubiquinone biosynthesis; Glycan structures - biosynthesis 1; Purine metabolism; Calcium signaling pathway; RNA polymerase;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF12895; PF03704; PF12770; PF00515; PF13414; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF13174; PF13176; PF13181; PF13371;
pfam_desc Anaphase-promoting complex, cyclosome, subunit 3; Bacterial transcriptional activator domain; CHAT domain; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id ANAPC3; BTAD; CHAT; TPR_1; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8; TPR_9;
pfam_target db:Pfam-A.hmm|PF12895.7 evalue:1e-09 score:37.7 best_domain_score:20.9 name:ANAPC3; db:Pfam-A.hmm|PF03704.17 evalue:4.3e-05 score:23.2 best_domain_score:14.4 name:BTAD; db:Pfam-A.hmm|PF12770.7 evalue:1.7e-43 score:148.3 best_domain_score:147.5 name:CHAT; db:Pfam-A.hmm|PF00515.28 evalue:1.7e-55 score:181.9 best_domain_score:32.4 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:2.1e-49 score:164.2 best_domain_score:27.4 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:3.2e-16 score:58.6 best_domain_score:22.8 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:7.8e-25 score:84.7 best_domain_score:21.1 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:1.8e-32 score:111.0 best_domain_score:32.9 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:1.8e-25 score:86.7 best_domain_score:17.4 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:4.5e-19 score:68.0 best_domain_score:27.5 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:1e-50 score:165.1 best_domain_score:29.5 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:1.9e-07 score:30.5 best_domain_score:9.3 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:2.6e-11 score:42.0 best_domain_score:10.6 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:5e-34 score:112.9 best_domain_score:21.7 name:TPR_8; db:Pfam-A.hmm|PF13371.6 evalue:7.5e-27 score:92.5 best_domain_score:25.6 name:TPR_9;
12222 11557 CDS
ID metaerg.pl|02377
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092942.1 1 219 evalue:1.3e-110 qcov:99.10 identity:88.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
12390 14387 CDS
ID metaerg.pl|02378
allec_ids 2.7.7.7;
allgo_ids GO:0005524;
allko_ids K02341; K02343; K02340;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198767.1 1 665 evalue:0.0e+00 qcov:100.00 identity:87.90;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00004; PF13401; PF13177; PF12169; PF05496;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain; DNA polymerase III, delta subunit; DNA polymerase III subunits gamma and tau domain III; Holliday junction DNA helicase RuvB P-loop domain;
pfam_id AAA; AAA_22; DNA_pol3_delta2; DNA_pol3_gamma3; RuvB_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:3.8e-13 score:49.2 best_domain_score:48.2 name:AAA; db:Pfam-A.hmm|PF13401.6 evalue:2e-06 score:27.3 best_domain_score:22.5 name:AAA_22; db:Pfam-A.hmm|PF13177.6 evalue:1.5e-43 score:147.6 best_domain_score:147.0 name:DNA_pol3_delta2; db:Pfam-A.hmm|PF12169.8 evalue:3.5e-17 score:61.9 best_domain_score:60.9 name:DNA_pol3_gamma3; db:Pfam-A.hmm|PF05496.12 evalue:7.3e-06 score:25.1 best_domain_score:22.2 name:RuvB_N;
tigrfam_acc TIGR02397;
tigrfam_desc DNA polymerase III, subunit gamma and tau;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnaX_nterm;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02397 evalue:2.1e-132 score:440.8 best_domain_score:440.5 name:TIGR02397;
16197 14788 CDS
ID metaerg.pl|02379
allec_ids 2.4.1.336;
allgo_ids GO:0016757; GO:0016021; GO:0000287; GO:0016758; GO:0006071; GO:0046467;
allko_ids K00721; K00729; K00694; K03429; K12997; K00698; K19003;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092936.1 1 469 evalue:3.6e-256 qcov:100.00 identity:95.70;
kegg_pathway_id 00510; 00530; 00500; 00561;
kegg_pathway_name N-Glycan biosynthesis; Aminosugars metabolism; Starch and sucrose metabolism; Glycerolipid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00535; PF13641; PF13506; PF13632;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family 21; Glycosyl transferase family group 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3; Glyco_transf_21; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.5e-28 score:99.0 best_domain_score:98.4 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:1.8e-35 score:122.1 best_domain_score:121.5 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13506.6 evalue:1.1e-15 score:56.8 best_domain_score:50.3 name:Glyco_transf_21; db:Pfam-A.hmm|PF13632.6 evalue:9.5e-24 score:83.6 best_domain_score:83.6 name:Glyco_trans_2_3;
sprot_desc Beta-monoglucosyldiacylglycerol synthase;
sprot_id sp|Q3MB01|BMGDS_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MB01|BMGDS_ANAVT 1 469 evalue:1.1e-224 qcov:100.00 identity:81.00;
tm_num 5;
16197 14788 transmembrane_helix
ID metaerg.pl|02380
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology i14941-14994o15007-15066i15865-15933o15943-16011i16048-16116o;
16732 17106 CDS
ID metaerg.pl|02381
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092935.1 1 124 evalue:2.3e-61 qcov:100.00 identity:96.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
17686 18780 CDS
ID metaerg.pl|02382
allko_ids K00625; K13788; K06873;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196309.1 1 363 evalue:6.5e-181 qcov:99.70 identity:93.10;
kegg_pathway_id 00620; 00640; 00430;
kegg_pathway_name Pyruvate metabolism; Propanoate metabolism; Taurine and hypotaurine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF13500; PF07085;
pfam_desc AAA domain; DRTGG domain;
pfam_id AAA_26; DRTGG;
pfam_target db:Pfam-A.hmm|PF13500.6 evalue:1.5e-27 score:96.0 best_domain_score:95.3 name:AAA_26; db:Pfam-A.hmm|PF07085.12 evalue:1.7e-31 score:107.4 best_domain_score:104.4 name:DRTGG;
sprot_desc hypothetical protein;
sprot_id sp|Q55458|Y039_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55458|Y039_SYNY3 1 348 evalue:9.1e-97 qcov:95.60 identity:54.60;
19418 19921 CDS
ID metaerg.pl|02383
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092933.1 1 167 evalue:1.5e-84 qcov:100.00 identity:99.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
20055 20474 CDS
ID metaerg.pl|02384
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196311.1 1 138 evalue:3.5e-58 qcov:99.30 identity:95.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF01124;
pfam_desc MAPEG family;
pfam_id MAPEG;
pfam_target db:Pfam-A.hmm|PF01124.18 evalue:3.7e-28 score:97.3 best_domain_score:97.1 name:MAPEG;
tm_num 4;
20055 20474 transmembrane_helix
ID metaerg.pl|02385
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology o20082-20150i20247-20306o20319-20387i20391-20459o;
20592 21083 CDS
ID metaerg.pl|02386
allko_ids K09767;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196312.1 1 163 evalue:1.1e-76 qcov:100.00 identity:96.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF04461;
pfam_desc Protein of unknown function (DUF520);
pfam_id DUF520;
pfam_target db:Pfam-A.hmm|PF04461.13 evalue:2.8e-59 score:199.1 best_domain_score:198.9 name:DUF520;
sprot_desc hypothetical protein;
sprot_id sp|B2IYY1|Y4736_NOSP7;
sprot_target db:uniprot_sprot|sp|B2IYY1|Y4736_NOSP7 1 163 evalue:1.0e-60 qcov:100.00 identity:77.30;
21137 22222 CDS
ID metaerg.pl|02387
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc punctiforme;
genomedb_acc GCF_000020025.1;
genomedb_target db:genomedb|GCF_000020025.1|WP_012413380.1 20 361 evalue:4.5e-126 qcov:94.70 identity:65.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF01436; PF08450;
pfam_desc NHL repeat; SMP-30/Gluconolactonase/LRE-like region;
pfam_id NHL; SGL;
pfam_target db:Pfam-A.hmm|PF01436.21 evalue:2.4e-05 score:23.4 best_domain_score:8.8 name:NHL; db:Pfam-A.hmm|PF08450.12 evalue:8.4e-11 score:41.1 best_domain_score:40.5 name:SGL;
sp YES;
21137 21277 signal_peptide
ID metaerg.pl|02388
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
23299 22742 CDS
ID metaerg.pl|02389
allec_ids 2.5.1.18;
allgo_ids GO:0005515; GO:0004364;
allko_ids K01800; K00799; K04097;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196313.1 1 185 evalue:6.8e-94 qcov:100.00 identity:91.90;
kegg_pathway_id 00480; 00643; 00350;
kegg_pathway_name Glutathione metabolism; Styrene degradation; Tyrosine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PWY-4061;
metacyc_pathway_name glutathione-mediated detoxification I;;
metacyc_pathway_type Detoxification; Other-Degradation;;
pfam_acc PF00043; PF13410; PF14497; PF02798; PF13409; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_2; GST_C_3; GST_N; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:3.8e-09 score:35.9 best_domain_score:35.2 name:GST_C; db:Pfam-A.hmm|PF13410.6 evalue:1.1e-06 score:27.8 best_domain_score:26.4 name:GST_C_2; db:Pfam-A.hmm|PF14497.6 evalue:2.6e-09 score:36.4 best_domain_score:35.7 name:GST_C_3; db:Pfam-A.hmm|PF02798.20 evalue:3.4e-21 score:74.6 best_domain_score:74.0 name:GST_N; db:Pfam-A.hmm|PF13409.6 evalue:3.1e-09 score:36.2 best_domain_score:35.7 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:1.2e-13 score:50.5 best_domain_score:49.9 name:GST_N_3;
sprot_desc Glutathione S-transferase 1;
sprot_id sp|P28338|GSTT1_MUSDO;
sprot_target db:uniprot_sprot|sp|P28338|GSTT1_MUSDO 30 183 evalue:1.7e-22 qcov:83.20 identity:35.70;
23776 23312 CDS
ID metaerg.pl|02390
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196314.1 1 154 evalue:1.1e-76 qcov:100.00 identity:96.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
24198 24920 CDS
ID metaerg.pl|02391
allgo_ids GO:0005515;
allko_ids K09571; K01768; K09667; K01802; K01090; K04460; K09574; K05864; K08884;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092920.1 1 240 evalue:4.6e-127 qcov:100.00 identity:93.30;
kegg_pathway_id 00230; 04020; 05012; 01030; 04010;
kegg_pathway_name Purine metabolism; Calcium signaling pathway; Parkinson's disease; Glycan structures - biosynthesis 1; MAPK signaling pathway;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00515; PF13374; PF13414; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF13174; PF13176; PF13181; PF13371;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_10; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8; TPR_9;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:4.7e-28 score:95.1 best_domain_score:35.6 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:8.4e-07 score:27.9 best_domain_score:16.1 name:TPR_10; db:Pfam-A.hmm|PF13414.6 evalue:1.3e-22 score:78.4 best_domain_score:37.3 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:2.6e-14 score:52.5 best_domain_score:28.7 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:3.8e-08 score:32.7 best_domain_score:13.9 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:7.3e-11 score:41.8 best_domain_score:17.9 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:2.1e-13 score:48.9 best_domain_score:20.4 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:4.3e-07 score:29.6 best_domain_score:17.9 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:8e-23 score:77.9 best_domain_score:27.6 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:1.7e-06 score:27.5 best_domain_score:12.7 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:5.2e-10 score:37.9 best_domain_score:9.7 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:1.9e-15 score:55.0 best_domain_score:14.9 name:TPR_8; db:Pfam-A.hmm|PF13371.6 evalue:4e-16 score:58.2 best_domain_score:27.4 name:TPR_9;
25859 25449 CDS
ID metaerg.pl|02392
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092919.1 1 136 evalue:1.7e-62 qcov:100.00 identity:94.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
26784 28118 CDS
ID metaerg.pl|02393
allec_ids 2.7.1.47;
allgo_ids GO:0005975; GO:0016773; GO:0009507; GO:0005737; GO:0009536; GO:0005524; GO:0019150; GO:0016310;
allko_ids K00854; K22935;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196320.1 26 444 evalue:7.1e-222 qcov:94.40 identity:93.30;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id RIBITOLUTIL-PWY; DARABCAT-PWY;
metacyc_pathway_name ribitol degradation;; D-arabinose degradation II;;
metacyc_pathway_type SUGAR-ALCOHOLS-DEG;; D-Arabinose-Degradation;;
pfam_acc PF02782; PF00370;
pfam_desc FGGY family of carbohydrate kinases, C-terminal domain; FGGY family of carbohydrate kinases, N-terminal domain;
pfam_id FGGY_C; FGGY_N;
pfam_target db:Pfam-A.hmm|PF02782.16 evalue:5.6e-07 score:28.7 best_domain_score:25.8 name:FGGY_C; db:Pfam-A.hmm|PF00370.21 evalue:4.8e-18 score:64.8 best_domain_score:64.4 name:FGGY_N;
sprot_desc D-ribulose kinase;
sprot_id sp|Q8L794|XK1_ARATH;
sprot_target db:uniprot_sprot|sp|Q8L794|XK1_ARATH 29 440 evalue:5.8e-114 qcov:92.80 identity:52.80;
28580 28191 CDS
ID metaerg.pl|02394
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196321.1 1 129 evalue:1.1e-63 qcov:100.00 identity:97.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF13366;
pfam_desc PD-(D/E)XK nuclease superfamily;
pfam_id PDDEXK_3;
pfam_target db:Pfam-A.hmm|PF13366.6 evalue:5.5e-40 score:135.6 best_domain_score:135.5 name:PDDEXK_3;
tigrfam_acc TIGR04256;
tigrfam_desc GxxExxY protein;
tigrfam_name GxxExxY;
tigrfam_target db:TIGRFAMs.hmm|TIGR04256 evalue:6.7e-41 score:138.5 best_domain_score:138.3 name:TIGR04256;
28689 31745 CDS
ID metaerg.pl|02395
allec_ids 6.1.1.9;
allgo_ids GO:0004812; GO:0006418; GO:0005737; GO:0002161; GO:0005524; GO:0004832; GO:0006438;
allko_ids K01873;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196322.1 1 1018 evalue:0.0e+00 qcov:100.00 identity:93.00;
kegg_pathway_id 00970; 00290;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Valine, leucine and isoleucine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF08264; PF14159; PF00133; PF09334; PF13603; PF10458;
pfam_desc Anticodon-binding domain of tRNA; CAAD domains of cyanobacterial aminoacyl-tRNA synthetase; tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Leucyl-tRNA synthetase, Domain 2; Valyl tRNA synthetase tRNA binding arm;
pfam_id Anticodon_1; CAAD; tRNA-synt_1; tRNA-synt_1g; tRNA-synt_1_2; Val_tRNA-synt_C;
pfam_target db:Pfam-A.hmm|PF08264.13 evalue:2.8e-43 score:146.7 best_domain_score:143.9 name:Anticodon_1; db:Pfam-A.hmm|PF14159.6 evalue:3.7e-21 score:74.0 best_domain_score:72.8 name:CAAD; db:Pfam-A.hmm|PF00133.22 evalue:1.5e-210 score:699.7 best_domain_score:695.9 name:tRNA-synt_1; db:Pfam-A.hmm|PF09334.11 evalue:6.8e-21 score:73.7 best_domain_score:25.1 name:tRNA-synt_1g; db:Pfam-A.hmm|PF13603.6 evalue:1.6e-10 score:40.1 best_domain_score:31.6 name:tRNA-synt_1_2; db:Pfam-A.hmm|PF10458.9 evalue:4.6e-21 score:74.1 best_domain_score:72.5 name:Val_tRNA-synt_C;
sprot_desc Valine--tRNA ligase;
sprot_id sp|Q8YX97|SYV_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YX97|SYV_NOSS1 1 1018 evalue:0.0e+00 qcov:100.00 identity:78.20;
tigrfam_acc TIGR00422;
tigrfam_desc valine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name valS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00422 evalue:0 score:1157.0 best_domain_score:1136.1 name:TIGR00422;
tm_num 2;
28689 31745 transmembrane_helix
ID metaerg.pl|02396
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology o31236-31304i31323-31382o;
32141 32584 CDS
ID metaerg.pl|02397
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092916.1 1 147 evalue:4.8e-66 qcov:100.00 identity:94.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
34803 32785 CDS
ID metaerg.pl|02398
allgo_ids GO:0005524; GO:0004672;
allko_ids K02486; K07675; K07683;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092913.1 1 672 evalue:0.0e+00 qcov:100.00 identity:94.90;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF03109; PF01163;
pfam_desc ABC1 family; RIO1 family;
pfam_id ABC1; RIO1;
pfam_target db:Pfam-A.hmm|PF03109.16 evalue:1.2e-36 score:124.7 best_domain_score:123.6 name:ABC1; db:Pfam-A.hmm|PF01163.22 evalue:1.7e-05 score:23.7 best_domain_score:21.1 name:RIO1;
sprot_desc hypothetical protein;
sprot_id sp|Q55680|Y005_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55680|Y005_SYNY3 7 655 evalue:1.1e-228 qcov:96.60 identity:60.10;
35342 37090 CDS
ID metaerg.pl|02399
allgo_ids GO:0005524; GO:0000724; GO:0009314; GO:0009432;
allko_ids K03631;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092912.1 1 581 evalue:1.0e-297 qcov:99.80 identity:94.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF13175; PF13304; PF13476; PF02463;
pfam_desc AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; RecF/RecN/SMC N terminal domain;
pfam_id AAA_15; AAA_21; AAA_23; SMC_N;
pfam_target db:Pfam-A.hmm|PF13175.6 evalue:2.3e-09 score:36.7 best_domain_score:34.9 name:AAA_15; db:Pfam-A.hmm|PF13304.6 evalue:2.1e-10 score:40.1 best_domain_score:21.6 name:AAA_21; db:Pfam-A.hmm|PF13476.6 evalue:8e-16 score:58.4 best_domain_score:55.3 name:AAA_23; db:Pfam-A.hmm|PF02463.19 evalue:1e-16 score:60.3 best_domain_score:59.6 name:SMC_N;
sprot_desc DNA repair protein RecN;
sprot_id sp|P74374|RECN_SYNY3;
sprot_target db:uniprot_sprot|sp|P74374|RECN_SYNY3 1 578 evalue:1.1e-163 qcov:99.30 identity:54.30;
tigrfam_acc TIGR00634;
tigrfam_desc DNA repair protein RecN;
tigrfam_mainrole DNA metabolism;
tigrfam_name recN;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00634 evalue:8e-173 score:575.5 best_domain_score:575.3 name:TIGR00634;
38000 37083 CDS
ID metaerg.pl|02400
allec_ids 2.7.7.53;
allgo_ids GO:0003877; GO:0005737; GO:0005634; GO:0005524; GO:0016787; GO:0004780; GO:0009117;
allko_ids K00988;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094074.1 9 301 evalue:5.7e-146 qcov:96.10 identity:87.00;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF09830;
pfam_desc ATP adenylyltransferase;
pfam_id ATP_transf;
pfam_target db:Pfam-A.hmm|PF09830.9 evalue:5.1e-23 score:80.2 best_domain_score:78.9 name:ATP_transf;
sprot_desc Diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase 2;
sprot_id sp|P49348|APA2_KLULA;
sprot_target db:uniprot_sprot|sp|P49348|APA2_KLULA 73 287 evalue:8.9e-21 qcov:70.50 identity:31.80;
39352 38282 CDS
ID metaerg.pl|02401
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093190.1 1 356 evalue:1.4e-159 qcov:100.00 identity:83.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
39492 39848 CDS
ID metaerg.pl|02402
allgo_ids GO:0016491; GO:0051537; GO:0055114;
allko_ids K00362; K00363; K02636; K05710;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093191.1 1 118 evalue:3.3e-57 qcov:100.00 identity:89.00;
kegg_pathway_id 00195; 00910; 00360;
kegg_pathway_name Photosynthesis; Nitrogen metabolism; Phenylalanine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00355; PF13806;
pfam_desc Rieske [2Fe-2S] domain; Rieske-like [2Fe-2S] domain;
pfam_id Rieske; Rieske_2;
pfam_target db:Pfam-A.hmm|PF00355.26 evalue:6.9e-18 score:63.6 best_domain_score:63.5 name:Rieske; db:Pfam-A.hmm|PF13806.6 evalue:2.5e-21 score:74.8 best_domain_score:74.7 name:Rieske_2;
40016 40621 CDS
ID metaerg.pl|02403
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093192.1 1 201 evalue:5.5e-105 qcov:100.00 identity:97.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF07002; PF00092; PF10138; PF13519;
pfam_desc Copine; von Willebrand factor type A domain; vWA found in TerF C terminus ; von Willebrand factor type A domain;
pfam_id Copine; VWA; vWA-TerF-like; VWA_2;
pfam_target db:Pfam-A.hmm|PF07002.16 evalue:1.1e-05 score:24.2 best_domain_score:23.8 name:Copine; db:Pfam-A.hmm|PF00092.28 evalue:5.3e-08 score:32.5 best_domain_score:32.2 name:VWA; db:Pfam-A.hmm|PF10138.9 evalue:1.9e-10 score:40.4 best_domain_score:40.0 name:vWA-TerF-like; db:Pfam-A.hmm|PF13519.6 evalue:3.9e-09 score:36.4 best_domain_score:35.8 name:VWA_2;
40718 41113 CDS
ID metaerg.pl|02404
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093193.1 1 131 evalue:6.4e-46 qcov:100.00 identity:81.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
41487 41149 CDS
ID metaerg.pl|02405
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093194.1 1 112 evalue:2.6e-48 qcov:100.00 identity:89.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF01638;
pfam_desc HxlR-like helix-turn-helix;
pfam_id HxlR;
pfam_target db:Pfam-A.hmm|PF01638.17 evalue:8.8e-37 score:124.1 best_domain_score:123.9 name:HxlR;
sprot_desc Uncharacterized HTH-type transcriptional regulator YdeP;
sprot_id sp|P96673|YDEP_BACSU;
sprot_target db:uniprot_sprot|sp|P96673|YDEP_BACSU 13 106 evalue:8.3e-25 qcov:83.90 identity:55.30;
41634 42257 CDS
ID metaerg.pl|02406
allec_ids 1.7.1.17;
allgo_ids GO:0016491; GO:0009055; GO:0010181; GO:0016652; GO:0016661;
allko_ids K01118;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Anabaenopsis;s__Anabaenopsis sp000316625;
genomedb_acc GCF_000316625.1;
genomedb_target db:genomedb|GCF_000316625.1|WP_015112585.1 1 207 evalue:1.5e-97 qcov:100.00 identity:82.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF02525; PF03358;
pfam_desc Flavodoxin-like fold; NADPH-dependent FMN reductase;
pfam_id Flavodoxin_2; FMN_red;
pfam_target db:Pfam-A.hmm|PF02525.17 evalue:1.7e-47 score:160.9 best_domain_score:160.8 name:Flavodoxin_2; db:Pfam-A.hmm|PF03358.15 evalue:2.8e-08 score:32.9 best_domain_score:32.4 name:FMN_red;
sprot_desc FMN-dependent NADH-azoreductase;
sprot_id sp|Q8YV76|AZOR_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YV76|AZOR_NOSS1 1 207 evalue:1.8e-94 qcov:100.00 identity:78.70;
42910 42407 CDS
ID metaerg.pl|02407
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093195.1 1 167 evalue:9.9e-84 qcov:100.00 identity:94.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF13239;
pfam_desc 2TM domain;
pfam_id 2TM;
pfam_target db:Pfam-A.hmm|PF13239.6 evalue:3.8e-14 score:52.0 best_domain_score:51.5 name:2TM;
tm_num 1;
42910 42407 transmembrane_helix
ID metaerg.pl|02408
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology i42680-42748o;
43855 43052 CDS
ID metaerg.pl|02409
allko_ids K01470;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093196.1 1 267 evalue:1.2e-147 qcov:100.00 identity:98.10;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF02633;
pfam_desc Creatinine amidohydrolase;
pfam_id Creatininase;
pfam_target db:Pfam-A.hmm|PF02633.14 evalue:1.4e-71 score:240.0 best_domain_score:239.9 name:Creatininase;
43957 44664 CDS
ID metaerg.pl|02410
allec_ids 2.7.1.63;
allgo_ids GO:0005524; GO:0004340; GO:0047330;
allko_ids K00845; K00886;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093197.1 1 235 evalue:1.2e-122 qcov:100.00 identity:93.20;
kegg_pathway_id 00010; 00052; 00500; 00521;
kegg_pathway_name Glycolysis / Gluconeogenesis; Galactose metabolism; Starch and sucrose metabolism; Streptomycin biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00480;
pfam_desc ROK family;
pfam_id ROK;
pfam_target db:Pfam-A.hmm|PF00480.20 evalue:4.7e-20 score:71.5 best_domain_score:67.7 name:ROK;
sprot_desc Polyphosphate glucokinase;
sprot_id sp|Q49988|PPGK_MYCLE;
sprot_target db:uniprot_sprot|sp|Q49988|PPGK_MYCLE 9 231 evalue:2.2e-27 qcov:94.90 identity:34.30;
44832 45851 CDS
ID metaerg.pl|02411
allko_ids K12420;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Cylindrospermum;s__Cylindrospermum stagnale;
genomedb_acc GCF_000317535.1;
genomedb_target db:genomedb|GCF_000317535.1|WP_015207848.1 1 338 evalue:4.2e-158 qcov:99.70 identity:82.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:6.7e-49 score:165.2 best_domain_score:164.9 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.6e-38 score:131.1 best_domain_score:130.6 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:2.3e-13 score:49.7 best_domain_score:49.0 name:KR;
46058 46375 CDS
ID metaerg.pl|02412
allec_ids 3.1.-.-;
allgo_ids GO:0009372; GO:0017148; GO:0044010; GO:0004521; GO:0045892; GO:2000145; GO:0043488;
allko_ids K13651;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingopyxis;s__Sphingopyxis flava;
genomedb_acc GCF_900168005.1;
genomedb_target db:genomedb|GCF_900168005.1|WP_079640163.1 1 105 evalue:1.5e-37 qcov:100.00 identity:73.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF15723;
pfam_desc Motility quorum-sensing regulator, toxin of MqsA;
pfam_id MqsR_toxin;
pfam_target db:Pfam-A.hmm|PF15723.5 evalue:1.6e-30 score:104.6 best_domain_score:104.4 name:MqsR_toxin;
sprot_desc mRNA interferase toxin MqsR;
sprot_id sp|Q46865|MQSR_ECOLI;
sprot_target db:uniprot_sprot|sp|Q46865|MQSR_ECOLI 3 102 evalue:8.6e-08 qcov:95.20 identity:37.00;
46368 46793 CDS
ID metaerg.pl|02413
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales;f__Syntrophobacteraceae;g__SbD1;s__SbD1 sp003165235;
genomedb_acc GCA_003165235.1;
genomedb_target db:genomedb|GCA_003165235.1|PLSV01000205.1_22 6 139 evalue:5.4e-51 qcov:95.00 identity:73.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF15731;
pfam_desc Antitoxin component of bacterial toxin-antitoxin system, MqsA;
pfam_id MqsA_antitoxin;
pfam_target db:Pfam-A.hmm|PF15731.5 evalue:2e-22 score:79.0 best_domain_score:78.7 name:MqsA_antitoxin;
tigrfam_acc TIGR03830; TIGR03831;
tigrfam_desc putative zinc finger/helix-turn-helix protein, YgiT family; YgiT-type zinc finger domain;
tigrfam_name CxxCG_CxxCG_HTH; YgiT_finger;
tigrfam_target db:TIGRFAMs.hmm|TIGR03830 evalue:2.8e-34 score:116.8 best_domain_score:116.6 name:TIGR03830; db:TIGRFAMs.hmm|TIGR03831 evalue:4.9e-06 score:25.9 best_domain_score:25.3 name:TIGR03831;
47014 48537 CDS
ID metaerg.pl|02414
allec_ids 2.1.2.3; 3.5.4.10; 2.1.2.3 3.5.4.10;
allgo_ids GO:0003937; GO:0004643; GO:0006164; GO:0006189;
allko_ids K01492; K00602;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093200.1 1 507 evalue:1.8e-274 qcov:100.00 identity:95.70;
kegg_pathway_id 00230; 00670;
kegg_pathway_name Purine metabolism; One carbon pool by folate;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PRPP-PWY; PWY-6123; PWY-841; DENOVOPURINE2-PWY; PWY-6124;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; inosine-5'-phosphate biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis II;; inosine-5'-phosphate biosynthesis II;;
metacyc_pathway_type Super-Pathways;; IMP-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;;
pfam_acc PF01808; PF02142;
pfam_desc AICARFT/IMPCHase bienzyme; MGS-like domain;
pfam_id AICARFT_IMPCHas; MGS;
pfam_target db:Pfam-A.hmm|PF01808.18 evalue:2.9e-118 score:393.9 best_domain_score:393.5 name:AICARFT_IMPCHas; db:Pfam-A.hmm|PF02142.22 evalue:5.1e-28 score:96.4 best_domain_score:95.4 name:MGS;
sprot_desc Bifunctional purine biosynthesis protein PurH;
sprot_id sp|B2IX54|PUR9_NOSP7;
sprot_target db:uniprot_sprot|sp|B2IX54|PUR9_NOSP7 1 507 evalue:4.6e-256 qcov:100.00 identity:87.00;
tigrfam_acc TIGR00355;
tigrfam_desc phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purH;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00355 evalue:4.4e-225 score:747.5 best_domain_score:747.3 name:TIGR00355;
48717 49940 CDS
ID metaerg.pl|02415
allgo_ids GO:0030288; GO:0016491;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092999.1 1 407 evalue:1.6e-220 qcov:100.00 identity:90.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF07995;
pfam_desc Glucose / Sorbosone dehydrogenase;
pfam_id GSDH;
pfam_target db:Pfam-A.hmm|PF07995.11 evalue:2.5e-88 score:295.8 best_domain_score:295.4 name:GSDH;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P73001|Y1608_SYNY3;
sprot_target db:uniprot_sprot|sp|P73001|Y1608_SYNY3 41 392 evalue:1.1e-50 qcov:86.50 identity:33.60;
48717 48776 lipoprotein_signal_peptide
ID metaerg.pl|02416
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
50815 50219 CDS
ID metaerg.pl|02417
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093001.1 1 182 evalue:1.4e-84 qcov:91.90 identity:89.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
51367 51068 CDS
ID metaerg.pl|02418
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093002.1 1 99 evalue:2.5e-42 qcov:100.00 identity:94.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF17195;
pfam_desc Protein of unknown function (DUF5132);
pfam_id DUF5132;
pfam_target db:Pfam-A.hmm|PF17195.4 evalue:4.1e-18 score:64.4 best_domain_score:63.7 name:DUF5132;
tm_num 1;
51367 51068 transmembrane_helix
ID metaerg.pl|02419
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology o51110-51178i;
53724 51451 CDS
ID metaerg.pl|02420
allec_ids 7.2.2.8; 3.6.3.-;
allgo_ids GO:0016021; GO:0005886; GO:0005524; GO:0019829; GO:0046872; GO:0006825;
allko_ids K05850; K01537; K17686;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093003.1 1 757 evalue:0.0e+00 qcov:100.00 identity:89.30;
kegg_pathway_id 04020;
kegg_pathway_name Calcium signaling pathway;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PWY-6135; PWY-6171; PWY-6166; PWY-6188; PWYG-321; PWY-6113;
metacyc_pathway_name ; ; ; ; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00122; PF00702; PF08282;
pfam_desc E1-E2 ATPase; haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase;
pfam_id E1-E2_ATPase; Hydrolase; Hydrolase_3;
pfam_target db:Pfam-A.hmm|PF00122.20 evalue:5e-33 score:113.4 best_domain_score:113.2 name:E1-E2_ATPase; db:Pfam-A.hmm|PF00702.26 evalue:2.4e-34 score:118.7 best_domain_score:117.7 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:3.6e-05 score:22.9 best_domain_score:21.0 name:Hydrolase_3;
sprot_desc Probable copper-transporting ATPase PacS;
sprot_id sp|P37279|ATCS_SYNE7;
sprot_target db:uniprot_sprot|sp|P37279|ATCS_SYNE7 171 749 evalue:1.1e-77 qcov:76.50 identity:33.30;
tigrfam_acc TIGR01494; TIGR01512; TIGR01525;
tigrfam_desc HAD ATPase, P-type, family IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ATPase_P-type; ATPase-IB2_Cd; ATPase-IB_hvy;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01494 evalue:2.2e-72 score:243.1 best_domain_score:239.5 name:TIGR01494; db:TIGRFAMs.hmm|TIGR01512 evalue:1.2e-106 score:356.6 best_domain_score:199.0 name:TIGR01512; db:TIGRFAMs.hmm|TIGR01525 evalue:1.4e-155 score:518.5 best_domain_score:518.2 name:TIGR01525;
54873 53917 CDS
ID metaerg.pl|02421
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194447.1 1 318 evalue:5.1e-113 qcov:100.00 identity:69.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
tm_num 1;
54873 53917 transmembrane_helix
ID metaerg.pl|02422
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology i54349-54417o;
55490 54969 CDS
ID metaerg.pl|02423
allec_ids 3.5.1.88;
allgo_ids GO:0046872; GO:0042586; GO:0006412;
allko_ids K01462;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093004.1 2 173 evalue:5.1e-83 qcov:99.40 identity:89.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF01327;
pfam_desc Polypeptide deformylase;
pfam_id Pep_deformylase;
pfam_target db:Pfam-A.hmm|PF01327.21 evalue:5.7e-50 score:168.3 best_domain_score:168.0 name:Pep_deformylase;
sprot_desc Peptide deformylase 2;
sprot_id sp|Q8YVH1|DEF2_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YVH1|DEF2_NOSS1 1 173 evalue:1.8e-71 qcov:100.00 identity:74.60;
tigrfam_acc TIGR00079;
tigrfam_desc peptide deformylase;
tigrfam_mainrole Protein fate;
tigrfam_name pept_deformyl;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00079 evalue:1.6e-40 score:137.4 best_domain_score:137.2 name:TIGR00079;
56787 55513 CDS
ID metaerg.pl|02424
allgo_ids GO:0005515; GO:0009279; GO:0016021; GO:0004252;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093005.1 1 424 evalue:4.7e-207 qcov:100.00 identity:89.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00595; PF13180; PF17820; PF00089; PF13365;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Trypsin; Trypsin-like peptidase domain;
pfam_id PDZ; PDZ_2; PDZ_6; Trypsin; Trypsin_2;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:1.8e-07 score:30.7 best_domain_score:30.7 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:8.2e-14 score:50.9 best_domain_score:49.9 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:7.3e-09 score:34.6 best_domain_score:33.1 name:PDZ_6; db:Pfam-A.hmm|PF00089.26 evalue:1.7e-14 score:53.4 best_domain_score:52.5 name:Trypsin; db:Pfam-A.hmm|PF13365.6 evalue:1.6e-34 score:119.2 best_domain_score:119.2 name:Trypsin_2;
sp YES;
sprot_desc Putative serine protease HtrA;
sprot_id sp|P73354|HTRA_SYNY3;
sprot_target db:uniprot_sprot|sp|P73354|HTRA_SYNY3 62 420 evalue:9.9e-103 qcov:84.70 identity:54.10;
tm_num 1;
55513 55641 lipoprotein_signal_peptide
ID metaerg.pl|02425
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
56787 55513 transmembrane_helix
ID metaerg.pl|02426
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology i55600-55668o;
56958 58337 CDS
ID metaerg.pl|02427
allgo_ids GO:0005524; GO:0005737; GO:0003688; GO:0006270; GO:0006275;
allko_ids K02313;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194444.1 1 459 evalue:5.8e-243 qcov:100.00 identity:92.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00004; PF00308; PF08299; PF11638; PF01695;
pfam_desc ATPase family associated with various cellular activities (AAA); Bacterial dnaA protein; Bacterial dnaA protein helix-turn-helix; DnaA N-terminal domain; IstB-like ATP binding protein;
pfam_id AAA; Bac_DnaA; Bac_DnaA_C; DnaA_N; IstB_IS21;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:6.8e-05 score:22.5 best_domain_score:21.2 name:AAA; db:Pfam-A.hmm|PF00308.18 evalue:2.1e-91 score:304.9 best_domain_score:304.0 name:Bac_DnaA; db:Pfam-A.hmm|PF08299.11 evalue:1.8e-30 score:104.0 best_domain_score:97.2 name:Bac_DnaA_C; db:Pfam-A.hmm|PF11638.8 evalue:3.2e-17 score:61.3 best_domain_score:61.3 name:DnaA_N; db:Pfam-A.hmm|PF01695.17 evalue:2e-12 score:46.4 best_domain_score:45.5 name:IstB_IS21;
sprot_desc Chromosomal replication initiator protein DnaA;
sprot_id sp|Q8YVG9|DNAA_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YVG9|DNAA_NOSS1 1 458 evalue:1.3e-222 qcov:99.80 identity:84.10;
tigrfam_acc TIGR00362;
tigrfam_desc chromosomal replication initiator protein DnaA;
tigrfam_mainrole DNA metabolism;
tigrfam_name DnaA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00362 evalue:6.6e-162 score:538.7 best_domain_score:538.5 name:TIGR00362;
58708 59871 CDS
ID metaerg.pl|02428
allec_ids 2.7.7.7;
allgo_ids GO:0003677; GO:0003887; GO:0006260; GO:0008408; GO:0009360; GO:0005737;
allko_ids K02338;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093009.1 1 387 evalue:1.9e-202 qcov:100.00 identity:97.70;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00712; PF02767; PF02768;
pfam_desc DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; DNA polymerase III beta subunit, C-terminal domain;
pfam_id DNA_pol3_beta; DNA_pol3_beta_2; DNA_pol3_beta_3;
pfam_target db:Pfam-A.hmm|PF00712.19 evalue:1.4e-41 score:140.7 best_domain_score:88.8 name:DNA_pol3_beta; db:Pfam-A.hmm|PF02767.16 evalue:2.8e-34 score:117.0 best_domain_score:114.2 name:DNA_pol3_beta_2; db:Pfam-A.hmm|PF02768.15 evalue:1.7e-32 score:111.0 best_domain_score:106.4 name:DNA_pol3_beta_3;
sprot_desc Beta sliding clamp;
sprot_id sp|P52023|DPO3B_SYNE7;
sprot_target db:uniprot_sprot|sp|P52023|DPO3B_SYNE7 1 387 evalue:3.0e-122 qcov:100.00 identity:60.80;
tigrfam_acc TIGR00663;
tigrfam_desc DNA polymerase III, beta subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnan;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00663 evalue:1.9e-106 score:355.3 best_domain_score:355.1 name:TIGR00663;
62620 59861 CDS
ID metaerg.pl|02429
allgo_ids GO:0005515;
allko_ids K06379; K10681; K01769; K07644; K07709; K13532; K10125; K11629; K11357; K04757; K07769; K11520; K14509; K12767; K02486; K11383; K07675; K07717; K10942; K13040; K07647; K10916; K08479; K03388; K02668; K07656; K01768; K07710; K07640; K07716; K02489; K07697; K07636; K07638; K07653; K02480; K02482; K08801; K10715; K07678; K02030; K11527; K13587; K07642; K11711; K11640; K11356; K02484; K00760; K08282; K07704; K07677; K07645; K07708; K02491; K07643; K11231; K03407; K00936; K07649; K07654; K07652; K07639; K08475; K13598; K07641; K07646; K13533; K11328; K07711; K07768; K11633; K07778; K11354; K07698; K07651; K07648; K07679; K02478;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093010.1 1 919 evalue:0.0e+00 qcov:100.00 identity:90.20;
kegg_pathway_id 00983; 03090; 02020; 04011; 00790; 05111; 00230;
kegg_pathway_name Drug metabolism - other enzymes; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Folate biosynthesis; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF01590; PF13185; PF13492; PF02518; PF00512; PF00360;
pfam_desc GAF domain; GAF domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Phytochrome region;
pfam_id GAF; GAF_2; GAF_3; HATPase_c; HisKA; PHY;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:5.8e-49 score:165.4 best_domain_score:76.3 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:4.4e-16 score:58.7 best_domain_score:22.2 name:GAF_2; db:Pfam-A.hmm|PF13492.6 evalue:1.8e-12 score:47.0 best_domain_score:20.0 name:GAF_3; db:Pfam-A.hmm|PF02518.26 evalue:9.1e-22 score:76.9 best_domain_score:76.0 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:5.2e-13 score:48.1 best_domain_score:47.3 name:HisKA; db:Pfam-A.hmm|PF00360.20 evalue:2.2e-09 score:36.1 best_domain_score:33.5 name:PHY;
64400 63213 CDS
ID metaerg.pl|02430
allec_ids 7.3.2.7; 3.6.1.-;
allgo_ids GO:0005524; GO:0016887; GO:0015446; GO:0046685;
allko_ids K01551;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194442.1 1 395 evalue:7.7e-220 qcov:100.00 identity:97.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PWY-6404; PWY-5354; PWY-6147; PWY-6502; ALL-CHORISMATE-PWY; FOLSYN-PWY; PWY-6383;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; oxidized GTP and dGTP detoxification;; superpathway of chorismate metabolism;; superpathway of tetrahydrofolate biosynthesis and salvage;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; ; 6-HM-Dihydropterin-PP-Biosynthesis;; Detoxification; Metabolic-Clusters;; Super-Pathways;; Folate-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;;
pfam_acc PF13614; PF02374; PF17886; PF01656; PF06564;
pfam_desc AAA domain; Anion-transporting ATPase; HSP20-like domain found in ArsA; CobQ/CobB/MinD/ParA nucleotide binding domain; Cellulose biosynthesis protein BcsQ;
pfam_id AAA_31; ArsA_ATPase; ArsA_HSP20; CbiA; CBP_BcsQ;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:7.7e-07 score:28.4 best_domain_score:26.5 name:AAA_31; db:Pfam-A.hmm|PF02374.15 evalue:6.3e-110 score:366.4 best_domain_score:366.1 name:ArsA_ATPase; db:Pfam-A.hmm|PF17886.1 evalue:1.1e-20 score:72.2 best_domain_score:70.6 name:ArsA_HSP20; db:Pfam-A.hmm|PF01656.23 evalue:2.9e-07 score:29.8 best_domain_score:28.8 name:CbiA; db:Pfam-A.hmm|PF06564.12 evalue:1.3e-05 score:24.0 best_domain_score:20.8 name:CBP_BcsQ;
sprot_desc Putative arsenical pump-driving ATPase;
sprot_id sp|Q55794|ARSA_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55794|ARSA_SYNY3 1 394 evalue:4.9e-197 qcov:99.70 identity:85.30;
tigrfam_acc TIGR00345;
tigrfam_desc transport-energizing ATPase, TRC40/GET3/ArsA family;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name GET3_arsA_TRC40;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00345 evalue:1.6e-110 score:368.5 best_domain_score:368.1 name:TIGR00345;
68025 64528 CDS
ID metaerg.pl|02431
allgo_ids GO:0005515;
allko_ids K07644; K13532; K07709; K07676; K10681; K06379; K07650; K01769; K07717; K07675; K11637; K10942; K13040; K07647; K07680; K11357; K02476; K11629; K02342; K10125; K04757; K11617; K14509; K11520; K07769; K11383; K00384; K13761; K02486; K12767; K01768; K07656; K07710; K07640; K07716; K11614; K02489; K07697; K10916; K08479; K07674; K03388; K02668; K07678; K10715; K07701; K13587; K02030; K11527; K07636; K07638; K07653; K02480; K14489; K08801; K02482; K11640; K04486; K11356; K02484; K00760; K07642; K11711; K01090; K13490; K02491; K11231; K07643; K08282; K01937; K10909; K07704; K07708; K07645; K07677; K07652; K07673; K01120; K07639; K08475; K07646; K07641; K13598; K07637; K03407; K07777; K07682; K07649; K00936; K07654; K07698; K07718; K07651; K07648; K02478; K07679; K11328; K13533; K08884; K00873; K07711; K07768; K11633; K02575; K07683; K11354; K07778;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira sp002154695;
genomedb_acc GCF_002154695.1;
genomedb_target db:genomedb|GCF_002154695.1|WP_086692119.1 3 1163 evalue:0.0e+00 qcov:99.70 identity:63.80;
kegg_pathway_id 00710; 00010; 00983; 00230; 05111; 00240; 03030; 02020; 04011; 00620; 03090; 00790; 00340;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Drug metabolism - other enzymes; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; DNA replication; Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system; Folate biosynthesis; Histidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF01590; PF13185; PF13492; PF02518; PF00512; PF00989; PF08447; PF08448; PF12860; PF13188; PF13426; PF00072;
pfam_desc GAF domain; GAF domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id GAF; GAF_2; GAF_3; HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_7; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:2.5e-17 score:63.0 best_domain_score:30.8 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:4e-21 score:75.0 best_domain_score:42.5 name:GAF_2; db:Pfam-A.hmm|PF13492.6 evalue:1.2e-12 score:47.5 best_domain_score:30.3 name:GAF_3; db:Pfam-A.hmm|PF02518.26 evalue:3.6e-29 score:100.8 best_domain_score:99.5 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:2.2e-13 score:49.2 best_domain_score:49.2 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:4.2e-28 score:96.8 best_domain_score:58.4 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:1.4e-17 score:62.9 best_domain_score:56.4 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:4.3e-26 score:90.6 best_domain_score:36.5 name:PAS_4; db:Pfam-A.hmm|PF12860.7 evalue:5.5e-07 score:29.0 best_domain_score:21.2 name:PAS_7; db:Pfam-A.hmm|PF13188.7 evalue:1.9e-13 score:49.3 best_domain_score:16.1 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:8.8e-20 score:70.1 best_domain_score:39.4 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:1.2e-26 score:92.3 best_domain_score:89.9 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:3.3e-47 score:158.9 best_domain_score:87.4 name:TIGR00229;
68579 68196 CDS
ID metaerg.pl|02432
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093014.1 1 123 evalue:3.0e-64 qcov:96.90 identity:92.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF10184;
pfam_desc Uncharacterized conserved protein (DUF2358);
pfam_id DUF2358;
pfam_target db:Pfam-A.hmm|PF10184.9 evalue:4.5e-38 score:129.2 best_domain_score:129.0 name:DUF2358;
69214 68636 CDS
ID metaerg.pl|02433
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093015.1 1 192 evalue:3.2e-94 qcov:100.00 identity:91.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
69694 69948 CDS
ID metaerg.pl|02434
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093016.1 1 84 evalue:2.5e-27 qcov:100.00 identity:87.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
70300 71418 CDS
ID metaerg.pl|02435
allgo_ids GO:0009294;
allko_ids K04096;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093036.1 1 372 evalue:1.2e-203 qcov:100.00 identity:95.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF02481; PF17782;
pfam_desc DNA recombination-mediator protein A; DprA winged helix domain;
pfam_id DNA_processg_A; DprA_WH;
pfam_target db:Pfam-A.hmm|PF02481.15 evalue:2.1e-78 score:261.6 best_domain_score:261.1 name:DNA_processg_A; db:Pfam-A.hmm|PF17782.1 evalue:8.5e-15 score:53.9 best_domain_score:52.3 name:DprA_WH;
sprot_desc hypothetical protein;
sprot_id sp|P73345|SMF_SYNY3;
sprot_target db:uniprot_sprot|sp|P73345|SMF_SYNY3 4 371 evalue:1.2e-112 qcov:98.90 identity:52.80;
tigrfam_acc TIGR00732;
tigrfam_desc DNA protecting protein DprA;
tigrfam_mainrole Cellular processes;
tigrfam_name dprA;
tigrfam_sub1role DNA transformation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00732 evalue:8.8e-81 score:269.4 best_domain_score:268.7 name:TIGR00732;
72321 71509 CDS
ID metaerg.pl|02436
allec_ids 3.5.1.128;
allgo_ids GO:0006807; GO:0016787;
allko_ids K12251; K03820; K01501; K11206;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092998.1 1 270 evalue:1.1e-148 qcov:100.00 identity:97.80;
kegg_pathway_id 00643; 00632; 00380; 00460; 00910; 00480;
kegg_pathway_name Styrene degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Cyanoamino acid metabolism; Nitrogen metabolism; Glutathione metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00795;
pfam_desc Carbon-nitrogen hydrolase;
pfam_id CN_hydrolase;
pfam_target db:Pfam-A.hmm|PF00795.22 evalue:9.6e-65 score:217.7 best_domain_score:217.6 name:CN_hydrolase;
sprot_desc Deaminated glutathione amidase;
sprot_id sp|P55175|NIT1_SYNY3;
sprot_target db:uniprot_sprot|sp|P55175|NIT1_SYNY3 1 270 evalue:3.9e-113 qcov:100.00 identity:73.10;
72449 73900 CDS
ID metaerg.pl|02437
allec_ids 1.14.99.n4;
allgo_ids GO:0016702; GO:0055114; GO:0009507; GO:0009570; GO:0005737; GO:0005794; GO:0005886; GO:0009506; GO:0005774; GO:0005773; GO:0045549; GO:0010436; GO:0046872; GO:0016121; GO:0016118; GO:0016124;
allko_ids K00465;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804480.1 1 474 evalue:1.9e-236 qcov:98.10 identity:82.90;
kegg_pathway_id 00362; 00590; 00626; 00351; 00623; 00643;
kegg_pathway_name Benzoate degradation via hydroxylation; Arachidonic acid metabolism; Naphthalene and anthracene degradation; 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation; 2,4-Dichlorobenzoate degradation; Styrene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF03055;
pfam_desc Retinal pigment epithelial membrane protein;
pfam_id RPE65;
pfam_target db:Pfam-A.hmm|PF03055.15 evalue:2.5e-103 score:346.0 best_domain_score:345.8 name:RPE65;
sprot_desc Carotenoid 9,10(9',10')-cleavage dioxygenase 1;
sprot_id sp|O65572|CCD1_ARATH;
sprot_target db:uniprot_sprot|sp|O65572|CCD1_ARATH 25 480 evalue:2.8e-21 qcov:94.40 identity:26.60;
75164 73989 CDS
ID metaerg.pl|02438
allgo_ids GO:0016020;
allko_ids K02004;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_C;s__Tolypothrix_C sp002218085;
genomedb_acc GCF_002218085.1;
genomedb_target db:genomedb|GCF_002218085.1|WP_089129919.1 1 391 evalue:2.6e-167 qcov:100.00 identity:76.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF02687;
pfam_desc FtsX-like permease family;
pfam_id FtsX;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:1.1e-06 score:28.2 best_domain_score:28.2 name:FtsX;
tigrfam_acc TIGR01185;
tigrfam_desc ABC exporter transmembrane subunit, DevC protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name devC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01185 evalue:8.7e-159 score:527.7 best_domain_score:527.5 name:TIGR01185;
tm_num 4;
75164 73989 transmembrane_helix
ID metaerg.pl|02439
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology o74046-74105i74796-74864o74955-75023i75057-75125o;
76589 75174 CDS
ID metaerg.pl|02440
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_C;s__Tolypothrix_C sp002218085;
genomedb_acc GCF_002218085.1;
genomedb_target db:genomedb|GCF_002218085.1|WP_089129920.1 33 462 evalue:4.1e-135 qcov:91.30 identity:65.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF13533; PF13437; PF16576;
pfam_desc Biotin-lipoyl like; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF13533.6 evalue:6.5e-12 score:44.3 best_domain_score:44.3 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:1.1e-08 score:35.0 best_domain_score:35.0 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:4.5e-08 score:31.8 best_domain_score:28.9 name:HlyD_D23;
tigrfam_acc TIGR02971;
tigrfam_desc ABC exporter membrane fusion protein, DevB family;
tigrfam_name heterocyst_DevB;
tigrfam_target db:TIGRFAMs.hmm|TIGR02971 evalue:3.1e-100 score:334.9 best_domain_score:326.9 name:TIGR02971;
78746 77061 CDS
ID metaerg.pl|02441
allgo_ids GO:0005515;
allko_ids K01768; K09571; K05864; K08884; K01802; K09667; K06269; K01090; K09574; K04460;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804478.1 1 561 evalue:1.0e-281 qcov:100.00 identity:86.70;
kegg_pathway_id 04010; 00230; 04020; 04510; 05012; 01030;
kegg_pathway_name MAPK signaling pathway; Purine metabolism; Calcium signaling pathway; Focal adhesion; Parkinson's disease; Glycan structures - biosynthesis 1;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF03704; PF10516; PF00515; PF13374; PF13414; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF13174; PF13176; PF13181; PF13371;
pfam_desc Bacterial transcriptional activator domain; SHNi-TPR; Tetratricopeptide repeat; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id BTAD; SHNi-TPR; TPR_1; TPR_10; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8; TPR_9;
pfam_target db:Pfam-A.hmm|PF03704.17 evalue:2.9e-05 score:23.8 best_domain_score:14.1 name:BTAD; db:Pfam-A.hmm|PF10516.9 evalue:9.2e-08 score:30.7 best_domain_score:7.4 name:SHNi-TPR; db:Pfam-A.hmm|PF00515.28 evalue:3e-57 score:187.5 best_domain_score:42.9 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:1.8e-11 score:42.8 best_domain_score:19.7 name:TPR_10; db:Pfam-A.hmm|PF13414.6 evalue:2e-53 score:177.0 best_domain_score:49.8 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:2.5e-28 score:97.4 best_domain_score:38.6 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:5.2e-13 score:47.9 best_domain_score:14.3 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:1e-32 score:111.7 best_domain_score:41.3 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:8.1e-30 score:100.3 best_domain_score:28.9 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:2.6e-13 score:49.5 best_domain_score:18.4 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:2e-48 score:157.9 best_domain_score:35.3 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:1.5e-15 score:56.0 best_domain_score:15.5 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:6.9e-21 score:71.9 best_domain_score:17.7 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:1.6e-38 score:127.0 best_domain_score:30.3 name:TPR_8; db:Pfam-A.hmm|PF13371.6 evalue:3e-23 score:81.0 best_domain_score:21.0 name:TPR_9;
80289 78877 CDS
ID metaerg.pl|02442
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092984.1 1 470 evalue:8.8e-239 qcov:100.00 identity:89.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF13399; PF03816;
pfam_desc LytR cell envelope-related transcriptional attenuator; Cell envelope-related transcriptional attenuator domain;
pfam_id LytR_C; LytR_cpsA_psr;
pfam_target db:Pfam-A.hmm|PF13399.6 evalue:1.3e-05 score:25.3 best_domain_score:23.4 name:LytR_C; db:Pfam-A.hmm|PF03816.14 evalue:8.4e-42 score:142.1 best_domain_score:141.2 name:LytR_cpsA_psr;
tigrfam_acc TIGR00350;
tigrfam_desc cell envelope-related function transcriptional attenuator common domain;
tigrfam_mainrole Regulatory functions;
tigrfam_name lytR_cpsA_psr;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00350 evalue:2.7e-45 score:153.5 best_domain_score:152.9 name:TIGR00350;
tm_num 1;
80289 78877 transmembrane_helix
ID metaerg.pl|02443
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology i78970-79038o;
80968 80576 CDS
ID metaerg.pl|02444
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092983.1 1 130 evalue:3.6e-57 qcov:100.00 identity:90.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
tm_num 3;
80968 80576 transmembrane_helix
ID metaerg.pl|02445
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology o80639-80698i80723-80791o80819-80887i;
81077 82237 CDS
ID metaerg.pl|02446
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092982.1 1 386 evalue:3.6e-198 qcov:100.00 identity:97.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:1.5e-66 score:224.1 best_domain_score:223.9 name:AI-2E_transport;
sprot_desc Putative transport protein sll0063;
sprot_id sp|Q55147|Y063_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55147|Y063_SYNY3 6 349 evalue:6.0e-107 qcov:89.10 identity:60.90;
tm_num 8;
81077 82237 transmembrane_helix
ID metaerg.pl|02447
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology o81119-81187i81200-81268o81311-81379i81554-81622o81728-81796i81815-81883o81968-82036i82049-82117o;
83601 82273 CDS
ID metaerg.pl|02448
allgo_ids GO:0005737; GO:0005615; GO:0004867; GO:0010951; GO:0050713; GO:0042176;
allko_ids K13963;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196005.1 1 442 evalue:7.0e-230 qcov:100.00 identity:91.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00079;
pfam_desc Serpin (serine protease inhibitor);
pfam_id Serpin;
pfam_target db:Pfam-A.hmm|PF00079.20 evalue:2.2e-120 score:401.6 best_domain_score:401.4 name:Serpin;
sp YES;
sprot_desc Leukocyte elastase inhibitor B;
sprot_id sp|Q8VHP7|ILEUB_MOUSE;
sprot_target db:uniprot_sprot|sp|Q8VHP7|ILEUB_MOUSE 73 441 evalue:4.8e-52 qcov:83.50 identity:36.40;
82273 82410 signal_peptide
ID metaerg.pl|02449
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
85101 84109 CDS
ID metaerg.pl|02450
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092979.1 1 330 evalue:1.8e-174 qcov:100.00 identity:91.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00534; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:1.1e-11 score:43.8 best_domain_score:43.0 name:Glycos_transf_1; db:Pfam-A.hmm|PF13692.6 evalue:2.1e-06 score:27.5 best_domain_score:25.4 name:Glyco_trans_1_4;
sp YES;
84109 84156 lipoprotein_signal_peptide
ID metaerg.pl|02451
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
85854 85201 CDS
ID metaerg.pl|02452
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092978.1 1 217 evalue:2.3e-109 qcov:100.00 identity:93.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
sprot_desc hypothetical protein;
sprot_id sp|P31972|Y1392_SYNP2;
sprot_target db:uniprot_sprot|sp|P31972|Y1392_SYNP2 16 217 evalue:1.6e-53 qcov:93.10 identity:53.00;
86317 86054 CDS
ID metaerg.pl|02453
allgo_ids GO:0006355;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092977.1 1 87 evalue:1.3e-39 qcov:100.00 identity:95.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00196; PF13384; PF08281;
pfam_desc Bacterial regulatory proteins, luxR family; Homeodomain-like domain; Sigma-70, region 4;
pfam_id GerE; HTH_23; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:1.5e-19 score:68.5 best_domain_score:68.3 name:GerE; db:Pfam-A.hmm|PF13384.6 evalue:3e-06 score:26.1 best_domain_score:25.3 name:HTH_23; db:Pfam-A.hmm|PF08281.12 evalue:3.7e-06 score:25.8 best_domain_score:25.3 name:Sigma70_r4_2;
86675 87652 CDS
ID metaerg.pl|02454
allec_ids 2.7.1.4;
allgo_ids GO:0009507; GO:0009570; GO:0005829; GO:0005524; GO:0019200; GO:0008865; GO:0016051; GO:0006633; GO:0006000; GO:0019252;
allko_ids K00847;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092976.1 1 325 evalue:3.5e-178 qcov:100.00 identity:94.50;
kegg_pathway_id 00500; 00051;
kegg_pathway_name Starch and sucrose metabolism; Fructose and mannose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PWY-621; PWY-3801; P122-PWY; PWY-5384; SUCUTIL-PWY;
metacyc_pathway_name sucrose degradation III (sucrose invertase);; sucrose degradation II (sucrose synthase);; heterolactic fermentation;; sucrose degradation IV (sucrose phosphorylase);; sucrose degradation I (sucrose phosphotransferase);;
metacyc_pathway_type SUCROSE-DEG;; SUCROSE-DEG;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; SUCROSE-DEG;; SUCROSE-DEG;;
pfam_acc PF00294;
pfam_desc pfkB family carbohydrate kinase;
pfam_id PfkB;
pfam_target db:Pfam-A.hmm|PF00294.24 evalue:4.5e-58 score:196.2 best_domain_score:196.0 name:PfkB;
sprot_desc Probable fructokinase-6, chloroplastic;
sprot_id sp|Q9C524|SCRK6_ARATH;
sprot_target db:uniprot_sprot|sp|Q9C524|SCRK6_ARATH 3 312 evalue:1.1e-42 qcov:95.40 identity:34.10;
88413 87649 CDS
ID metaerg.pl|02455
allgo_ids GO:0003676; GO:0008270; GO:0016818;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc calcicola;
genomedb_acc GCF_001904715.1;
genomedb_target db:genomedb|GCF_001904715.1|WP_073644790.1 1 254 evalue:2.8e-122 qcov:100.00 identity:79.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF08797;
pfam_desc HIRAN domain;
pfam_id HIRAN;
pfam_target db:Pfam-A.hmm|PF08797.11 evalue:1.7e-06 score:27.1 best_domain_score:26.6 name:HIRAN;
89309 88416 CDS
ID metaerg.pl|02456
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp001712795;
genomedb_acc GCF_001712795.1;
genomedb_target db:genomedb|GCF_001712795.1|WP_069073629.1 1 295 evalue:8.9e-112 qcov:99.30 identity:68.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
89792 89322 CDS
ID metaerg.pl|02457
allec_ids 2.7.1.12; 2.7.1.-;
allgo_ids GO:0005524; GO:0046316; GO:0046177;
allko_ids K00851;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092975.1 1 156 evalue:6.0e-75 qcov:100.00 identity:90.40;
kegg_pathway_id 00030;
kegg_pathway_name Pentose phosphate pathway;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PLPSAL-PWY; PWY-5107; LIPA-CORESYN-PWY; PWY0-1261; PWY-6577; PWY-5530; PWY-5381; P1-PWY; PWY0-163; PWY0-845; LPSSYN-PWY; GLUCONSUPER-PWY;
metacyc_pathway_name pyridoxal 5'-phosphate salvage I;; phytol salvage pathway;; lipid A-core biosynthesis (E. coli K-12);; anhydromuropeptides recycling I;; farnesylcysteine salvage pathway;; sorbitol biosynthesis II;; pyridine nucleotide cycling (plants);; ; ; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;; superpathway of lipopolysaccharide biosynthesis;; D-gluconate degradation;;
metacyc_pathway_type Vitamin-B6-Biosynthesis;; DITERPENOID-SYN;; Glycan-Biosynthesis; Lipid-Biosynthesis;; Anhydromuropeptides-Recycling;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Sorbitol-Biosynthesis;; NAD-Metabolism;; ; ; Super-Pathways; Vitamin-B6-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;; CARBOXYLATES-DEG;;
pfam_acc PF13238; PF01202;
pfam_desc AAA domain; Shikimate kinase;
pfam_id AAA_18; SKI;
pfam_target db:Pfam-A.hmm|PF13238.6 evalue:8.2e-08 score:32.1 best_domain_score:31.8 name:AAA_18; db:Pfam-A.hmm|PF01202.22 evalue:1.4e-15 score:57.0 best_domain_score:56.8 name:SKI;
sprot_desc Probable gluconokinase;
sprot_id sp|B0BML1|GNTK_XENTR;
sprot_target db:uniprot_sprot|sp|B0BML1|GNTK_XENTR 1 151 evalue:1.1e-27 qcov:96.80 identity:41.40;
tigrfam_acc TIGR01313;
tigrfam_desc carbohydrate kinase, thermoresistant glucokinase family;
tigrfam_name therm_gnt_kin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01313 evalue:2.3e-42 score:143.7 best_domain_score:143.5 name:TIGR01313;
90588 89863 CDS
ID metaerg.pl|02458
allgo_ids GO:0003677;
allko_ids K06206;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092974.1 1 241 evalue:1.1e-128 qcov:100.00 identity:92.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF03749; PF17746;
pfam_desc Sugar fermentation stimulation protein RE domain; SfsA N-terminal OB domain;
pfam_id SfsA; SfsA_N;
pfam_target db:Pfam-A.hmm|PF03749.13 evalue:8.8e-42 score:141.5 best_domain_score:141.2 name:SfsA; db:Pfam-A.hmm|PF17746.1 evalue:5.8e-22 score:76.9 best_domain_score:76.1 name:SfsA_N;
sprot_desc Sugar fermentation stimulation protein homolog;
sprot_id sp|Q8YSK0|SFSA_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YSK0|SFSA_NOSS1 1 241 evalue:1.4e-122 qcov:100.00 identity:86.30;
tigrfam_acc TIGR00230;
tigrfam_desc sugar fermentation stimulation protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sfsA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00230 evalue:6.1e-79 score:263.8 best_domain_score:263.6 name:TIGR00230;
90776 91468 CDS
ID metaerg.pl|02459
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092973.1 8 230 evalue:1.8e-120 qcov:97.00 identity:93.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF10014;
pfam_desc 2OG-Fe dioxygenase;
pfam_id 2OG-Fe_Oxy_2;
pfam_target db:Pfam-A.hmm|PF10014.9 evalue:2.2e-65 score:219.3 best_domain_score:219.0 name:2OG-Fe_Oxy_2;
92684 91536 CDS
ID metaerg.pl|02460
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196015.1 1 382 evalue:2.3e-192 qcov:100.00 identity:88.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF05167;
pfam_desc Uncharacterised ACR (DUF711);
pfam_id DUF711;
pfam_target db:Pfam-A.hmm|PF05167.12 evalue:5.2e-119 score:397.0 best_domain_score:396.8 name:DUF711;
92809 94077 CDS
ID metaerg.pl|02461
allgo_ids GO:0005515;
allko_ids K09571; K01768; K01802; K09667; K01090; K04460; K09574; K05864; K03040; K08884;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092971.1 1 422 evalue:6.3e-228 qcov:100.00 identity:92.20;
kegg_pathway_id 04010; 00230; 03020; 04020; 05012; 01030;
kegg_pathway_name MAPK signaling pathway; Purine metabolism; RNA polymerase; Calcium signaling pathway; Parkinson's disease; Glycan structures - biosynthesis 1;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF03704; PF10516; PF06552; PF00515; PF13374; PF13414; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF13174; PF13176; PF13181; PF13371; PF13525;
pfam_desc Bacterial transcriptional activator domain; SHNi-TPR; Plant specific mitochondrial import receptor subunit TOM20; Tetratricopeptide repeat; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Outer membrane lipoprotein;
pfam_id BTAD; SHNi-TPR; TOM20_plant; TPR_1; TPR_10; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8; TPR_9; YfiO;
pfam_target db:Pfam-A.hmm|PF03704.17 evalue:1.5e-05 score:24.7 best_domain_score:15.1 name:BTAD; db:Pfam-A.hmm|PF10516.9 evalue:7e-06 score:24.6 best_domain_score:11.1 name:SHNi-TPR; db:Pfam-A.hmm|PF06552.12 evalue:7.6e-05 score:21.8 best_domain_score:11.3 name:TOM20_plant; db:Pfam-A.hmm|PF00515.28 evalue:5.4e-50 score:164.5 best_domain_score:35.4 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:3.5e-07 score:29.1 best_domain_score:11.4 name:TPR_10; db:Pfam-A.hmm|PF13414.6 evalue:3.5e-40 score:134.7 best_domain_score:44.3 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:1.4e-20 score:72.6 best_domain_score:29.4 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:3.5e-16 score:57.8 best_domain_score:18.5 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:2.5e-26 score:91.3 best_domain_score:30.1 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:9.9e-25 score:84.4 best_domain_score:20.7 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:6.3e-10 score:38.7 best_domain_score:16.5 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:4.2e-44 score:144.4 best_domain_score:29.8 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:2.8e-06 score:26.8 best_domain_score:14.6 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:9.4e-10 score:37.1 best_domain_score:10.3 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:3.1e-26 score:88.6 best_domain_score:20.6 name:TPR_8; db:Pfam-A.hmm|PF13371.6 evalue:3.3e-29 score:100.1 best_domain_score:26.7 name:TPR_9; db:Pfam-A.hmm|PF13525.6 evalue:1.8e-08 score:33.6 best_domain_score:25.8 name:YfiO;
94883 94092 CDS
ID metaerg.pl|02462
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092970.1 1 263 evalue:1.7e-135 qcov:100.00 identity:96.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF11103;
pfam_desc Protein of unknown function (DUF2887);
pfam_id DUF2887;
pfam_target db:Pfam-A.hmm|PF11103.8 evalue:5.9e-77 score:257.4 best_domain_score:257.4 name:DUF2887;
tigrfam_acc TIGR01784;
tigrfam_desc conserved hypothetical protein;
tigrfam_name T_den_put_tspse;
tigrfam_target db:TIGRFAMs.hmm|TIGR01784 evalue:3.8e-19 score:68.7 best_domain_score:68.2 name:TIGR01784;
96463 95102 CDS
ID metaerg.pl|02463
allec_ids 1.6.5.9;
allgo_ids GO:0016491; GO:0055114; GO:0005758; GO:0005739; GO:0003954; GO:0001300; GO:0019655; GO:0006116;
allko_ids K03388; K00176; K00382; K01008; K00529; K00356; K00302; K03885; K17871;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091397.1 1 453 evalue:3.1e-241 qcov:100.00 identity:92.70;
kegg_pathway_id 00252; 00620; 00450; 00360; 00190; 00071; 00790; 00720; 00280; 00010; 00020; 00260;
kegg_pathway_name Alanine and aspartate metabolism; Pyruvate metabolism; Selenoamino acid metabolism; Phenylalanine metabolism; Oxidative phosphorylation; Fatty acid metabolism; Folate biosynthesis; Reductive carboxylate cycle (CO2 fixation); Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF01266; PF01494; PF01134; PF03486; PF13450; PF13454; PF00070; PF07992; PF13738;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; Glucose inhibited division protein A; HI0933-like protein; NAD(P)-binding Rossmann-like domain; FAD-NAD(P)-binding; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id DAO; FAD_binding_3; GIDA; HI0933_like; NAD_binding_8; NAD_binding_9; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:2.4e-11 score:43.0 best_domain_score:19.7 name:DAO; db:Pfam-A.hmm|PF01494.19 evalue:4.1e-06 score:25.5 best_domain_score:18.1 name:FAD_binding_3; db:Pfam-A.hmm|PF01134.22 evalue:1.8e-07 score:29.8 best_domain_score:12.0 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:3.2e-06 score:25.3 best_domain_score:16.3 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:2.8e-08 score:33.1 best_domain_score:28.1 name:NAD_binding_8; db:Pfam-A.hmm|PF13454.6 evalue:9.9e-07 score:28.1 best_domain_score:14.2 name:NAD_binding_9; db:Pfam-A.hmm|PF00070.27 evalue:4.4e-17 score:61.7 best_domain_score:40.3 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.8e-57 score:194.0 best_domain_score:193.8 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:3.5e-08 score:32.3 best_domain_score:14.7 name:Pyr_redox_3;
sprot_desc External NADH-ubiquinone oxidoreductase 1, mitochondrial;
sprot_id sp|P40215|NDH1_YEAST;
sprot_target db:uniprot_sprot|sp|P40215|NDH1_YEAST 13 414 evalue:4.1e-38 qcov:88.70 identity:28.40;
tm_num 1;
96463 95102 transmembrane_helix
ID metaerg.pl|02464
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology o96254-96322i;
99208 96596 CDS
ID metaerg.pl|02465
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0003684;
allko_ids K03555;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092969.1 8 870 evalue:0.0e+00 qcov:99.20 identity:97.70;
kegg_pathway_id 03430;
kegg_pathway_name Mismatch repair;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF01624; PF05188; PF05192; PF05190; PF00488;
pfam_desc MutS domain I; MutS domain II; MutS domain III; MutS family domain IV; MutS domain V;
pfam_id MutS_I; MutS_II; MutS_III; MutS_IV; MutS_V;
pfam_target db:Pfam-A.hmm|PF01624.20 evalue:3.4e-36 score:123.1 best_domain_score:122.4 name:MutS_I; db:Pfam-A.hmm|PF05188.17 evalue:3.3e-23 score:81.7 best_domain_score:80.8 name:MutS_II; db:Pfam-A.hmm|PF05192.18 evalue:1.6e-43 score:148.4 best_domain_score:147.7 name:MutS_III; db:Pfam-A.hmm|PF05190.18 evalue:2.1e-29 score:100.9 best_domain_score:99.6 name:MutS_IV; db:Pfam-A.hmm|PF00488.21 evalue:4.1e-83 score:277.3 best_domain_score:276.4 name:MutS_V;
sprot_desc DNA mismatch repair protein MutS;
sprot_id sp|Q3M892|MUTS_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M892|MUTS_ANAVT 8 870 evalue:0.0e+00 qcov:99.20 identity:87.10;
tigrfam_acc TIGR01070;
tigrfam_desc DNA mismatch repair protein MutS;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutS1;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01070 evalue:1.4e-280 score:932.5 best_domain_score:932.2 name:TIGR01070;
99860 99264 CDS
ID metaerg.pl|02466
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp001597745;
genomedb_acc GCF_001597745.1;
genomedb_target db:genomedb|GCF_001597745.1|WP_066384778.1 1 195 evalue:6.2e-77 qcov:98.50 identity:72.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF14103;
pfam_desc Domain of unknown function (DUF4276);
pfam_id DUF4276;
pfam_target db:Pfam-A.hmm|PF14103.6 evalue:8.5e-33 score:113.3 best_domain_score:113.2 name:DUF4276;
101050 99854 CDS
ID metaerg.pl|02467
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp001597745;
genomedb_acc GCF_001597745.1;
genomedb_target db:genomedb|GCF_001597745.1|WP_066384779.1 1 398 evalue:8.9e-200 qcov:100.00 identity:85.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF13175; PF13304; PF13476; PF11398; PF02463;
pfam_desc AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; Protein of unknown function (DUF2813); RecF/RecN/SMC N terminal domain;
pfam_id AAA_15; AAA_21; AAA_23; DUF2813; SMC_N;
pfam_target db:Pfam-A.hmm|PF13175.6 evalue:4.6e-23 score:81.8 best_domain_score:74.5 name:AAA_15; db:Pfam-A.hmm|PF13304.6 evalue:3.6e-34 score:118.2 best_domain_score:116.2 name:AAA_21; db:Pfam-A.hmm|PF13476.6 evalue:8.3e-07 score:28.9 best_domain_score:27.6 name:AAA_23; db:Pfam-A.hmm|PF11398.8 evalue:5.7e-07 score:28.3 best_domain_score:13.7 name:DUF2813; db:Pfam-A.hmm|PF02463.19 evalue:5.7e-13 score:48.0 best_domain_score:29.7 name:SMC_N;
101937 101413 CDS
ID metaerg.pl|02468
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092966.1 1 174 evalue:8.1e-89 qcov:100.00 identity:96.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
103208 101946 CDS
ID metaerg.pl|02469
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092965.1 1 420 evalue:1.3e-185 qcov:100.00 identity:83.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF13175; PF13304; PF13476; PF02463;
pfam_desc AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; RecF/RecN/SMC N terminal domain;
pfam_id AAA_15; AAA_21; AAA_23; SMC_N;
pfam_target db:Pfam-A.hmm|PF13175.6 evalue:5.4e-29 score:101.3 best_domain_score:99.9 name:AAA_15; db:Pfam-A.hmm|PF13304.6 evalue:1.2e-34 score:119.8 best_domain_score:118.5 name:AAA_21; db:Pfam-A.hmm|PF13476.6 evalue:7.7e-09 score:35.6 best_domain_score:33.2 name:AAA_23; db:Pfam-A.hmm|PF02463.19 evalue:5e-13 score:48.2 best_domain_score:46.9 name:SMC_N;
104300 103320 CDS
ID metaerg.pl|02470
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092964.1 1 326 evalue:1.9e-160 qcov:100.00 identity:93.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF07466;
pfam_desc Protein of unknown function (DUF1517);
pfam_id DUF1517;
pfam_target db:Pfam-A.hmm|PF07466.11 evalue:1.5e-64 score:216.7 best_domain_score:216.4 name:DUF1517;
sp YES;
tm_num 2;
103320 103409 signal_peptide
ID metaerg.pl|02471
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
104300 103320 transmembrane_helix
ID metaerg.pl|02472
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology i103353-103421o103566-103634i;
105715 106947 CDS
ID metaerg.pl|02473
allec_ids 2.4.1.346;
allgo_ids GO:0016757; GO:0009405; GO:0046488; GO:0008654;
allko_ids K13003; K00712; K08256; K13677; K00749; K03844; K02844; K13668; K12996; K03429; K00703;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092962.1 1 410 evalue:1.2e-220 qcov:100.00 identity:90.70;
kegg_pathway_id 00540; 00500; 01030; 00510; 00561; 01031;
kegg_pathway_name Lipopolysaccharide biosynthesis; Starch and sucrose metabolism; Glycan structures - biosynthesis 1; N-Glycan biosynthesis; Glycerolipid metabolism; Glycan structures - biosynthesis 2;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00534; PF13439; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:8.4e-35 score:119.1 best_domain_score:118.6 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:1.3e-09 score:37.5 best_domain_score:36.8 name:Glyco_transf_4; db:Pfam-A.hmm|PF13692.6 evalue:3.3e-23 score:81.8 best_domain_score:81.2 name:Glyco_trans_1_4;
sprot_desc GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase;
sprot_id sp|P9WMZ2|PIMB_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WMZ2|PIMB_MYCTO 20 387 evalue:8.6e-19 qcov:89.80 identity:25.60;
tm_num 2;
105715 106947 transmembrane_helix
ID metaerg.pl|02474
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology o105952-106020i106057-106125o;
107156 106944 CDS
ID metaerg.pl|02475
allgo_ids GO:0009507;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092961.1 1 70 evalue:3.4e-30 qcov:100.00 identity:94.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF02597;
pfam_desc ThiS family;
pfam_id ThiS;
pfam_target db:Pfam-A.hmm|PF02597.20 evalue:2.2e-15 score:56.3 best_domain_score:56.1 name:ThiS;
sprot_desc hypothetical protein;
sprot_id sp|P51344|YCF40_PORPU;
sprot_target db:uniprot_sprot|sp|P51344|YCF40_PORPU 1 70 evalue:1.2e-08 qcov:100.00 identity:40.00;
tigrfam_acc TIGR01683;
tigrfam_desc thiamine biosynthesis protein ThiS;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name thiS;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR01683 evalue:5e-22 score:77.2 best_domain_score:77.0 name:TIGR01683;
108288 107182 CDS
ID metaerg.pl|02476
allec_ids 2.5.1.3;
allgo_ids GO:0000287; GO:0004789; GO:0009228; GO:0009229;
allko_ids K03574; K00788;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092960.1 1 367 evalue:5.9e-198 qcov:99.70 identity:95.40;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id THISYN-PWY; THISYNARA-PWY;
metacyc_pathway_name superpathway of thiamine diphosphate biosynthesis I;; superpathway of thiamine diphosphate biosynthesis III (eukaryotes);;
metacyc_pathway_type Super-Pathways; Thiamine-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;;
pfam_acc PF17792; PF02581;
pfam_desc ThiD2 family; Thiamine monophosphate synthase;
pfam_id ThiD2; TMP-TENI;
pfam_target db:Pfam-A.hmm|PF17792.1 evalue:6.4e-42 score:142.2 best_domain_score:138.2 name:ThiD2; db:Pfam-A.hmm|PF02581.17 evalue:2.7e-67 score:224.8 best_domain_score:224.3 name:TMP-TENI;
sprot_desc Thiamine-phosphate synthase;
sprot_id sp|Q8YX72|THIE_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YX72|THIE_NOSS1 20 368 evalue:1.6e-170 qcov:94.80 identity:86.20;
tigrfam_acc TIGR00693;
tigrfam_desc thiamine-phosphate diphosphorylase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name thiE;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00693 evalue:2e-71 score:238.5 best_domain_score:237.4 name:TIGR00693;
109771 109043 CDS
ID metaerg.pl|02477
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196029.1 1 240 evalue:1.6e-98 qcov:99.20 identity:75.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
tm_num 7;
109771 109043 transmembrane_helix
ID metaerg.pl|02478
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology i109133-109186o109244-109303i109364-109432o109460-109519i109553-109606o109619-109678i109712-109765o;
109889 111496 CDS
ID metaerg.pl|02479
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092958.1 14 535 evalue:5.0e-254 qcov:97.60 identity:87.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF13229; PF07602; PF05048;
pfam_desc Right handed beta helix region; Protein of unknown function (DUF1565); Periplasmic copper-binding protein (NosD);
pfam_id Beta_helix; DUF1565; NosD;
pfam_target db:Pfam-A.hmm|PF13229.6 evalue:5e-17 score:61.4 best_domain_score:58.5 name:Beta_helix; db:Pfam-A.hmm|PF07602.11 evalue:1.5e-57 score:194.0 best_domain_score:192.6 name:DUF1565; db:Pfam-A.hmm|PF05048.13 evalue:2.9e-14 score:52.2 best_domain_score:42.1 name:NosD;
tigrfam_acc TIGR03804;
tigrfam_desc parallel beta-helix repeat;
tigrfam_name para_beta_helix;
tigrfam_target db:TIGRFAMs.hmm|TIGR03804 evalue:4.1e-12 score:44.7 best_domain_score:26.6 name:TIGR03804;
tm_num 1;
109889 111496 transmembrane_helix
ID metaerg.pl|02480
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology i109994-110062o;
112800 111703 CDS
ID metaerg.pl|02481
allgo_ids GO:0006629;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092957.1 1 365 evalue:1.1e-191 qcov:100.00 identity:89.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00487;
pfam_desc Fatty acid desaturase;
pfam_id FA_desaturase;
pfam_target db:Pfam-A.hmm|PF00487.24 evalue:8.4e-27 score:93.8 best_domain_score:93.8 name:FA_desaturase;
tm_num 5;
112800 111703 transmembrane_helix
ID metaerg.pl|02482
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology i111805-111861o111889-111957i111994-112053o112327-112386i112405-112473o;
113901 113116 CDS
ID metaerg.pl|02483
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092923.1 30 261 evalue:2.7e-104 qcov:88.90 identity:87.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
116048 113958 CDS
ID metaerg.pl|02484
allko_ids K01448; K01225; K01179; K01183; K01181;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092924.1 1 696 evalue:0.0e+00 qcov:100.00 identity:87.90;
kegg_pathway_id 00550; 00500; 00530;
kegg_pathway_name Peptidoglycan biosynthesis; Starch and sucrose metabolism; Aminosugars metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF13229; PF07602; PF05048; PF00395;
pfam_desc Right handed beta helix region; Protein of unknown function (DUF1565); Periplasmic copper-binding protein (NosD); S-layer homology domain;
pfam_id Beta_helix; DUF1565; NosD; SLH;
pfam_target db:Pfam-A.hmm|PF13229.6 evalue:1.9e-17 score:62.8 best_domain_score:62.8 name:Beta_helix; db:Pfam-A.hmm|PF07602.11 evalue:1.9e-62 score:210.1 best_domain_score:207.2 name:DUF1565; db:Pfam-A.hmm|PF05048.13 evalue:1.3e-16 score:59.8 best_domain_score:58.9 name:NosD; db:Pfam-A.hmm|PF00395.20 evalue:1.5e-61 score:203.4 best_domain_score:55.3 name:SLH;
tigrfam_acc TIGR03804;
tigrfam_desc parallel beta-helix repeat;
tigrfam_name para_beta_helix;
tigrfam_target db:TIGRFAMs.hmm|TIGR03804 evalue:1.4e-11 score:43.1 best_domain_score:23.1 name:TIGR03804;
117995 116520 CDS
ID metaerg.pl|02485
allec_ids 6.3.5.-;
allgo_ids GO:0016874; GO:0005524; GO:0050567; GO:0006412;
allko_ids K02434;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_042202079.1 1 491 evalue:5.5e-276 qcov:100.00 identity:99.00;
kegg_pathway_id 00252; 00251;
kegg_pathway_name Alanine and aspartate metabolism; Glutamate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PWY490-4;
metacyc_pathway_name L-asparagine biosynthesis III (tRNA-dependent);;
metacyc_pathway_type ASPARAGINE-SYN; Aminoacyl-tRNAs-Charging;;
pfam_acc PF02934; PF02637;
pfam_desc GatB/GatE catalytic domain; GatB domain;
pfam_id GatB_N; GatB_Yqey;
pfam_target db:Pfam-A.hmm|PF02934.15 evalue:3.3e-115 score:383.4 best_domain_score:383.0 name:GatB_N; db:Pfam-A.hmm|PF02637.18 evalue:1.3e-44 score:150.9 best_domain_score:150.0 name:GatB_Yqey;
sprot_desc Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B;
sprot_id sp|B2J8F0|GATB_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J8F0|GATB_NOSP7 1 490 evalue:2.4e-257 qcov:99.80 identity:90.40;
tigrfam_acc TIGR00133;
tigrfam_desc aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name gatB;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00133 evalue:9.6e-182 score:603.9 best_domain_score:603.7 name:TIGR00133;
118458 118994 CDS
ID metaerg.pl|02486
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804470.1 1 177 evalue:8.9e-91 qcov:99.40 identity:91.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF06042;
pfam_desc Nucleotidyltransferase;
pfam_id NTP_transf_6;
pfam_target db:Pfam-A.hmm|PF06042.11 evalue:1.5e-52 score:176.9 best_domain_score:176.7 name:NTP_transf_6;
120645 119137 CDS
ID metaerg.pl|02487
allec_ids 4.1.1.-;
allgo_ids GO:0016831; GO:0005829; GO:0008694; GO:0006744;
allko_ids K03182;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092512.1 1 502 evalue:4.8e-291 qcov:100.00 identity:98.40;
kegg_pathway_id 00130;
kegg_pathway_name Ubiquinone biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PWY-5114; PWY-5113; PWY-5163; PWY-5856; ALL-CHORISMATE-PWY; UBISYN-PWY; PWY-5855; PWY-181; PWY-5826; PWY-5857;
metacyc_pathway_name UDP-sugars interconversion;; UDP-D-apiose biosynthesis (from UDP-D-glucuronate);; p-cumate degradation to 2-hydroxypentadienoate;; ubiquinol-9 biosynthesis (prokaryotic);; superpathway of chorismate metabolism;; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ubiquinol-7 biosynthesis (prokaryotic);; photorespiration;; hypoglycin biosynthesis;; ubiquinol-10 biosynthesis (prokaryotic);;
metacyc_pathway_type Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; UDP-Sugar-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Ubiquinone-Biosynthesis;; Super-Pathways;; Super-Pathways; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; Photosynthesis;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Ubiquinone-Biosynthesis;;
pfam_acc PF01977;
pfam_desc 3-octaprenyl-4-hydroxybenzoate carboxy-lyase;
pfam_id UbiD;
pfam_target db:Pfam-A.hmm|PF01977.16 evalue:3.1e-149 score:496.5 best_domain_score:496.3 name:UbiD;
sprot_desc hypothetical protein;
sprot_id sp|P72861|Y936_SYNY3;
sprot_target db:uniprot_sprot|sp|P72861|Y936_SYNY3 1 501 evalue:2.0e-267 qcov:99.80 identity:88.80;
tigrfam_acc TIGR00148;
tigrfam_desc decarboxylase, UbiD family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00148;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00148 evalue:5.2e-180 score:597.9 best_domain_score:597.8 name:TIGR00148;
121106 121744 CDS
ID metaerg.pl|02488
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092480.1 1 212 evalue:1.3e-56 qcov:100.00 identity:62.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
sp YES;
tigrfam_acc TIGR02595;
tigrfam_desc PEP-CTERM protein-sorting domain;
tigrfam_mainrole Cell envelope;
tigrfam_name PEP_exosort;
tigrfam_sub1role Surface structures;
tigrfam_target db:TIGRFAMs.hmm|TIGR02595 evalue:7.2e-05 score:22.5 best_domain_score:22.5 name:TIGR02595;
121106 121204 signal_peptide
ID metaerg.pl|02489
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
122436 123221 CDS
ID metaerg.pl|02490
allec_ids 7.3.2.1;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015415; GO:0005315;
allko_ids K02000; K02036; K02023; K05816; K01995; K02049; K10111; K10112; K02045; K11072; K06861; K02071; K01996; K06021; K02017; K02010; K05847; K02006; K02052;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092479.1 1 261 evalue:1.8e-132 qcov:100.00 identity:91.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.1e-07 score:31.2 best_domain_score:19.4 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:3.6e-31 score:107.7 best_domain_score:107.2 name:ABC_tran;
sprot_desc Phosphate import ATP-binding protein PstB 4;
sprot_id sp|Q3M4H6|PSTB4_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M4H6|PSTB4_ANAVT 1 260 evalue:5.5e-120 qcov:99.60 identity:80.00;
123352 124740 CDS
ID metaerg.pl|02491
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804121.1 124 462 evalue:1.2e-163 qcov:73.40 identity:86.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF01936;
pfam_desc NYN domain;
pfam_id NYN;
pfam_target db:Pfam-A.hmm|PF01936.18 evalue:3.1e-06 score:27.0 best_domain_score:25.9 name:NYN;
125011 126051 CDS
ID metaerg.pl|02492
allec_ids 1.13.11.27;
allgo_ids GO:0003868; GO:0046872; GO:0006572;
allko_ids K01759; K00457;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092477.1 1 345 evalue:2.3e-175 qcov:99.70 identity:91.30;
kegg_pathway_id 04011; 00620; 00350; 00360;
kegg_pathway_name MAPK signaling pathway - yeast; Pyruvate metabolism; Tyrosine metabolism; Phenylalanine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PWY-1581; PWY-6318; PWY-1422; PWY-5864;
metacyc_pathway_name plastoquinol-9 biosynthesis I;; L-phenylalanine degradation IV (mammalian, via side chain);; vitamin E biosynthesis (tocopherols);; superpathway of plastoquinol biosynthesis;;
metacyc_pathway_type Plastoquinone-Biosynthesis;; PHENYLALANINE-DEG;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF00903; PF13468; PF13669;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase-like domain; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase; Glyoxalase_3; Glyoxalase_4;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:1.3e-20 score:73.1 best_domain_score:47.6 name:Glyoxalase; db:Pfam-A.hmm|PF13468.6 evalue:6.7e-10 score:38.6 best_domain_score:16.5 name:Glyoxalase_3; db:Pfam-A.hmm|PF13669.6 evalue:6.7e-20 score:70.6 best_domain_score:40.4 name:Glyoxalase_4;
sprot_desc hypothetical protein;
sprot_id sp|Q55810|Y090_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55810|Y090_SYNY3 1 337 evalue:9.0e-54 qcov:97.40 identity:35.10;
tigrfam_acc TIGR01263;
tigrfam_desc 4-hydroxyphenylpyruvate dioxygenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name 4HPPD;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01263 evalue:8.2e-98 score:327.3 best_domain_score:326.7 name:TIGR01263;
126092 126772 CDS
ID metaerg.pl|02493
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092476.1 1 226 evalue:2.7e-116 qcov:100.00 identity:92.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF13419; PF00702; PF13242;
pfam_desc Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD_2; Hydrolase; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:4.4e-15 score:55.4 best_domain_score:54.1 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:9.8e-10 score:38.3 best_domain_score:38.0 name:Hydrolase; db:Pfam-A.hmm|PF13242.6 evalue:6.4e-14 score:51.0 best_domain_score:50.3 name:Hydrolase_like;
127606 126980 CDS
ID metaerg.pl|02494
allgo_ids GO:0009941; GO:0009535; GO:0016021; GO:0055035; GO:0044183; GO:0061077; GO:0009658; GO:0009704; GO:0006457;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092475.1 1 208 evalue:1.3e-101 qcov:100.00 identity:93.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF11833;
pfam_desc Protein CHAPERONE-LIKE PROTEIN OF POR1-like;
pfam_id CPP1-like;
pfam_target db:Pfam-A.hmm|PF11833.8 evalue:1.4e-74 score:249.2 best_domain_score:249.1 name:CPP1-like;
sprot_desc hypothetical protein;
sprot_id sp|G5DBJ0|CPP1_NICBE;
sprot_target db:uniprot_sprot|sp|G5DBJ0|CPP1_NICBE 5 208 evalue:5.7e-11 qcov:98.10 identity:27.50;
tm_num 3;
127606 126980 transmembrane_helix
ID metaerg.pl|02495
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
topology o127361-127414i127433-127501o127544-127600i;
128162 127947 CDS
ID metaerg.pl|02496
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
128494 129213 CDS
ID metaerg.pl|02497
allgo_ids GO:0000160; GO:0009507; GO:0003677; GO:0006355;
allko_ids K07718; K07651; K07648; K07679; K02478; K07711; K08884; K07768; K07778; K11354; K07652; K08475; K07639; K01120; K07673; K07641; K07646; K07637; K03407; K07682; K07654; K02491; K11231; K01937; K08282; K07704; K07645; K07708; K07677; K11640; K11356; K00760; K02484; K07642; K11711; K10715; K07678; K11527; K02030; K07636; K07638; K07653; K02480; K02482; K01768; K07710; K07640; K07716; K02489; K10916; K08479; K03388; K02668; K07675; K07717; K07647; K10125; K11357; K04757; K07769; K12767; K13761; K02486; K11383; K07644; K07709; K06379; K10681; K07676; K07650; K01769;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092474.1 1 239 evalue:2.0e-130 qcov:100.00 identity:99.60;
kegg_pathway_id 00983; 00240; 00230; 05111; 03090; 02020; 04011; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:1.1e-29 score:102.1 best_domain_score:101.5 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:6e-28 score:96.0 best_domain_score:95.1 name:Trans_reg_C;
sprot_desc Probable transcriptional regulator ycf27;
sprot_id sp|O78428|YCF27_GUITH;
sprot_target db:uniprot_sprot|sp|O78428|YCF27_GUITH 5 237 evalue:2.8e-46 qcov:97.50 identity:42.70;
129921 129724 CDS
ID metaerg.pl|02498
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092473.1 1 65 evalue:3.0e-28 qcov:100.00 identity:96.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF10929;
pfam_desc Protein of unknown function (DUF2811);
pfam_id DUF2811;
pfam_target db:Pfam-A.hmm|PF10929.8 evalue:1.8e-31 score:107.4 best_domain_score:107.2 name:DUF2811;
131162 130485 CDS
ID metaerg.pl|02499
allec_ids 3.5.4.19; 3.6.1.31;
allgo_ids GO:0000105; GO:0004635; GO:0005737; GO:0005524; GO:0004636;
allko_ids K01523; K01496; K11755; K00013;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094016.1 10 225 evalue:1.5e-119 qcov:96.00 identity:98.10;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PRPP-PWY; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; HISTIDINE-SYN;;
pfam_acc PF03819; PF01502; PF01503;
pfam_desc MazG nucleotide pyrophosphohydrolase domain; Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase;
pfam_id MazG; PRA-CH; PRA-PH;
pfam_target db:Pfam-A.hmm|PF03819.17 evalue:4.1e-05 score:22.9 best_domain_score:22.7 name:MazG; db:Pfam-A.hmm|PF01502.18 evalue:6.6e-35 score:118.0 best_domain_score:117.6 name:PRA-CH; db:Pfam-A.hmm|PF01503.17 evalue:4e-15 score:55.3 best_domain_score:54.8 name:PRA-PH;
sprot_desc Histidine biosynthesis bifunctional protein HisIE;
sprot_id sp|Q8YS28|HIS2_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YS28|HIS2_NOSS1 19 225 evalue:1.8e-103 qcov:92.00 identity:85.60;
tigrfam_acc TIGR03188;
tigrfam_desc phosphoribosyl-ATP diphosphatase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name histidine_hisI;
tigrfam_sub1role Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR03188 evalue:2.7e-29 score:100.4 best_domain_score:99.7 name:TIGR03188;
131518 132816 CDS
ID metaerg.pl|02500
allec_ids 5.4.3.8;
allgo_ids GO:0008483; GO:0030170; GO:0005737; GO:0042286; GO:0015995; GO:0006782;
allko_ids K01845;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092472.1 1 432 evalue:2.9e-244 qcov:100.00 identity:98.10;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
metacyc_pathway_id PWY-5918; PWY-5188;
metacyc_pathway_name superpathay of heme b biosynthesis from glutamate;; tetrapyrrole biosynthesis I (from glutamate);;
metacyc_pathway_type Heme-b-Biosynthesis; Super-Pathways;; Tetrapyrrole-Biosynthesis;;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:1.6e-74 score:250.2 best_domain_score:249.9 name:Aminotran_3;
sprot_desc Glutamate-1-semialdehyde 2,1-aminomutase;
sprot_id sp|B2J7M9|GSA_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J7M9|GSA_NOSP7 1 432 evalue:4.5e-236 qcov:100.00 identity:92.80;
tigrfam_acc TIGR00713;
tigrfam_desc glutamate-1-semialdehyde-2,1-aminomutase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemL;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00713 evalue:2.2e-183 score:608.9 best_domain_score:608.7 name:TIGR00713;
133514 135118 CDS
ID metaerg.pl|02501
allec_ids 2.7.11.1;
allgo_ids GO:0004672; GO:0005524; GO:0006468; GO:0004674;
allko_ids K02178; K07675; K08853; K02486; K13414; K04688; K13304; K05688; K13303; K04372; K04443; K01728; K05096; K05097; K02480; K04445; K04420; K04421; K08286; K01768; K08792; K04373; K08809; K05098; K08855; K08333; K08856; K08282; K11228; K08854; K08790; K11889; K04444; K11623; K04442; K07778; K07683; K08884; K08810; K11265; K07673; K13302; K07682; K03407;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092470.1 1 534 evalue:9.9e-279 qcov:100.00 identity:91.60;
kegg_pathway_id 05012; 04150; 00040; 04110; 02020; 04011; 04010; 00230; 04510; 04140; 04111;
kegg_pathway_name Parkinson's disease; mTOR signaling pathway; Pentose and glucuronate interconversions; Cell cycle; Two-component system - General; MAPK signaling pathway - yeast; MAPK signaling pathway; Purine metabolism; Focal adhesion; Regulation of autophagy; Cell cycle - yeast;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0266789; 0.00106479; 72.3332; 0.0162232; 72.3772;
pfam_acc PF14531; PF00805; PF13576; PF13599; PF00069; PF07714;
pfam_desc Kinase-like; Pentapeptide repeats (8 copies); Pentapeptide repeats (9 copies); Pentapeptide repeats (9 copies); Protein kinase domain; Protein tyrosine kinase;
pfam_id Kinase-like; Pentapeptide; Pentapeptide_3; Pentapeptide_4; Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF14531.6 evalue:9.2e-09 score:34.2 best_domain_score:31.5 name:Kinase-like; db:Pfam-A.hmm|PF00805.22 evalue:4e-26 score:89.5 best_domain_score:39.9 name:Pentapeptide; db:Pfam-A.hmm|PF13576.6 evalue:8.9e-12 score:44.2 best_domain_score:25.4 name:Pentapeptide_3; db:Pfam-A.hmm|PF13599.6 evalue:2.2e-11 score:43.0 best_domain_score:36.3 name:Pentapeptide_4; db:Pfam-A.hmm|PF00069.25 evalue:3.5e-36 score:124.2 best_domain_score:123.6 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:4.9e-17 score:61.3 best_domain_score:60.8 name:Pkinase_Tyr;
sprot_desc Serine/threonine-protein kinase B;
sprot_id sp|P74297|SPKB_SYNY3;
sprot_target db:uniprot_sprot|sp|P74297|SPKB_SYNY3 1 415 evalue:2.0e-113 qcov:77.70 identity:48.80;
>Feature NODE_12_length_125968_cov_10.6113
6586 149 CDS
ID metaerg.pl|02502
allgo_ids GO:0016798;
allko_ids K01179; K01183; K08884; K01216; K01448; K05366; K01225; K08282; K08809; K01181; K01728; K12567;
kegg_pathway_id 00500; 00530; 00040; 00550;
kegg_pathway_name Starch and sucrose metabolism; Aminosugars metabolism; Pentose and glucuronate interconversions; Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF17936; PF02018; PF08329; PF10179; PF16323; PF16389; PF00041; PF00801; PF06903; PF07495;
pfam_desc Bacterial Ig domain; Carbohydrate binding domain; Chitinase A, N-terminal domain; Uncharacterised conserved protein (DUF2369); Domain of unknown function (DUF4959); Domain of unknown function; Fibronectin type III domain; PKD domain; VirK protein; Y_Y_Y domain;
pfam_id Big_6; CBM_4_9; ChitinaseA_N; DUF2369; DUF4959; DUF4998; fn3; PKD; VirK; Y_Y_Y;
pfam_target db:Pfam-A.hmm|PF17936.1 evalue:2.2e-09 score:36.7 best_domain_score:9.0 name:Big_6; db:Pfam-A.hmm|PF02018.17 evalue:5.6e-15 score:55.1 best_domain_score:11.8 name:CBM_4_9; db:Pfam-A.hmm|PF08329.10 evalue:6.6e-08 score:31.5 best_domain_score:7.8 name:ChitinaseA_N; db:Pfam-A.hmm|PF10179.9 evalue:2.5e-09 score:36.6 best_domain_score:9.0 name:DUF2369; db:Pfam-A.hmm|PF16323.5 evalue:2.6e-18 score:65.5 best_domain_score:11.1 name:DUF4959; db:Pfam-A.hmm|PF16389.5 evalue:1.5e-45 score:154.5 best_domain_score:16.5 name:DUF4998; db:Pfam-A.hmm|PF00041.21 evalue:4.1e-69 score:228.2 best_domain_score:43.1 name:fn3; db:Pfam-A.hmm|PF00801.20 evalue:2e-07 score:30.0 best_domain_score:30.0 name:PKD; db:Pfam-A.hmm|PF06903.12 evalue:1.2e-05 score:24.6 best_domain_score:5.8 name:VirK; db:Pfam-A.hmm|PF07495.13 evalue:1e-06 score:27.8 best_domain_score:12.0 name:Y_Y_Y;
sp YES;
tm_num 1;
149 253 signal_peptide
ID metaerg.pl|02503
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
6586 149 transmembrane_helix
ID metaerg.pl|02504
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i167-226o;
7302 6583 CDS
ID metaerg.pl|02505
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
tm_num 1;
7302 6583 transmembrane_helix
ID metaerg.pl|02506
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i6643-6711o;
10886 7305 CDS
ID metaerg.pl|02507
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF02369;
pfam_desc Bacterial Ig-like domain (group 1);
pfam_id Big_1;
pfam_target db:Pfam-A.hmm|PF02369.16 evalue:2.7e-14 score:52.2 best_domain_score:32.5 name:Big_1;
sp YES;
tm_num 1;
7305 7394 signal_peptide
ID metaerg.pl|02508
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
10886 7305 transmembrane_helix
ID metaerg.pl|02509
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i7323-7391o;
11205 12962 CDS
ID metaerg.pl|02510
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
tm_num 1;
11205 12962 transmembrane_helix
ID metaerg.pl|02511
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i11274-11342o;
13019 13576 CDS
ID metaerg.pl|02512
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Patulibacter;s__Patulibacter minatonensis;
genomedb_acc GCF_000519325.1;
genomedb_target db:genomedb|GCF_000519325.1|WP_026909793.1 9 185 evalue:8.2e-15 qcov:95.70 identity:32.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF00583;
pfam_desc Acetyltransferase (GNAT) family;
pfam_id Acetyltransf_1;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:2e-08 score:33.7 best_domain_score:33.3 name:Acetyltransf_1;
13760 14164 CDS
ID metaerg.pl|02513
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
14203 14898 CDS
ID metaerg.pl|02514
allgo_ids GO:0003723;
genomedb_OC d__Bacteria;p__Thermotogota;c__Thermotogae;o__Petrotogales;f__Petrotogaceae;g__Petrotoga;s__Petrotoga mobilis;
genomedb_acc GCF_000018605.1;
genomedb_target db:genomedb|GCF_000018605.1|WP_012208368.1 55 228 evalue:1.6e-28 qcov:75.30 identity:35.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF13184;
pfam_desc NusA-like KH domain;
pfam_id KH_5;
pfam_target db:Pfam-A.hmm|PF13184.6 evalue:1.4e-21 score:75.6 best_domain_score:74.4 name:KH_5;
14895 15443 CDS
ID metaerg.pl|02515
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF07963;
pfam_desc Prokaryotic N-terminal methylation motif;
pfam_id N_methyl;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:1e-06 score:27.3 best_domain_score:25.9 name:N_methyl;
sp YES;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:4.7e-05 score:22.2 best_domain_score:21.4 name:TIGR02532;
tm_num 1;
14895 14996 signal_peptide
ID metaerg.pl|02516
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
14895 15443 transmembrane_helix
ID metaerg.pl|02517
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i14931-14999o;
15536 17254 CDS
ID metaerg.pl|02518
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__UBA2241;f__UBA2241;g__UBA2241;s__UBA2241 sp002347645;
genomedb_acc GCA_002347645.1;
genomedb_target db:genomedb|GCA_002347645.1|DDYF01000018.1_29 56 566 evalue:9.8e-83 qcov:89.30 identity:36.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF00437; PF05157;
pfam_desc Type II/IV secretion system protein; Type II secretion system (T2SS), protein E, N-terminal domain;
pfam_id T2SSE; T2SSE_N;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:2.4e-64 score:216.2 best_domain_score:215.8 name:T2SSE; db:Pfam-A.hmm|PF05157.15 evalue:1.8e-09 score:37.0 best_domain_score:35.5 name:T2SSE_N;
17254 18537 CDS
ID metaerg.pl|02519
allgo_ids GO:0016021; GO:0005886; GO:0009306;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA5794;g__BMS3BBIN02;s__BMS3BBIN02 sp002898115;
genomedb_acc GCA_002898115.1;
genomedb_target db:genomedb|GCA_002898115.1|GBE25984.1 19 419 evalue:1.1e-59 qcov:93.90 identity:37.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF00482;
pfam_desc Type II secretion system (T2SS), protein F;
pfam_id T2SSF;
pfam_target db:Pfam-A.hmm|PF00482.23 evalue:2.2e-48 score:162.6 best_domain_score:82.6 name:T2SSF;
sprot_desc Type IV pilus assembly protein TapC;
sprot_id sp|P45793|TAPC_AERHY;
sprot_target db:uniprot_sprot|sp|P45793|TAPC_AERHY 85 420 evalue:2.9e-46 qcov:78.70 identity:34.80;
tm_num 3;
17254 18537 transmembrane_helix
ID metaerg.pl|02520
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i17833-17901o17944-18012i18433-18501o;
18749 19111 CDS
ID metaerg.pl|02521
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
19219 19584 CDS
ID metaerg.pl|02522
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
20201 19920 CDS
ID metaerg.pl|02523
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
tm_num 1;
20201 19920 transmembrane_helix
ID metaerg.pl|02524
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology o19977-20045i;
20594 22156 CDS
ID metaerg.pl|02525
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF00437;
pfam_desc Type II/IV secretion system protein;
pfam_id T2SSE;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:1.5e-40 score:138.2 best_domain_score:137.3 name:T2SSE;
tigrfam_acc TIGR01420;
tigrfam_desc twitching motility protein;
tigrfam_mainrole Cellular processes;
tigrfam_name pilT_fam;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR01420 evalue:3.5e-112 score:374.2 best_domain_score:373.9 name:TIGR01420;
22410 23567 CDS
ID metaerg.pl|02526
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__Paceibacterales;f__GWA2-46-15;g__GWA2-46-15;s__GWA2-46-15 sp001823105;
genomedb_acc GCA_001823105.1;
genomedb_target db:genomedb|GCA_001823105.1|OHA62116.1 3 349 evalue:6.1e-12 qcov:90.10 identity:24.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF14450; PF11104;
pfam_desc Cell division protein FtsA; Type IV pilus assembly protein PilM;;
pfam_id FtsA; PilM_2;
pfam_target db:Pfam-A.hmm|PF14450.6 evalue:2.8e-09 score:36.6 best_domain_score:33.8 name:FtsA; db:Pfam-A.hmm|PF11104.8 evalue:8.4e-18 score:63.7 best_domain_score:48.5 name:PilM_2;
23564 24433 CDS
ID metaerg.pl|02527
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
tm_num 1;
23564 24433 transmembrane_helix
ID metaerg.pl|02528
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i23726-23794o;
24435 25346 CDS
ID metaerg.pl|02529
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
tm_num 1;
24435 25346 transmembrane_helix
ID metaerg.pl|02530
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i24504-24572o;
25517 27391 CDS
ID metaerg.pl|02531
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
28114 27449 CDS
ID metaerg.pl|02532
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
28648 28247 CDS
ID metaerg.pl|02533
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
29142 28645 CDS
ID metaerg.pl|02534
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
29328 30680 CDS
ID metaerg.pl|02535
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF07963;
pfam_desc Prokaryotic N-terminal methylation motif;
pfam_id N_methyl;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:4.2e-07 score:28.5 best_domain_score:27.6 name:N_methyl;
sp YES;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:2.6e-06 score:26.2 best_domain_score:25.2 name:TIGR02532;
tm_num 1;
29328 29441 signal_peptide
ID metaerg.pl|02536
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
29328 30680 transmembrane_helix
ID metaerg.pl|02537
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i29361-29429o;
30949 31737 CDS
ID metaerg.pl|02538
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
tm_num 3;
30949 31737 transmembrane_helix
ID metaerg.pl|02539
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology o31246-31314i31375-31443o31486-31539i;
34219 31790 CDS
ID metaerg.pl|02540
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Palsa-688;g__PALSA-693;s__PALSA-693 sp003156595;
genomedb_acc GCA_003156595.1;
genomedb_target db:genomedb|GCA_003156595.1|PMHH01000066.1_16 126 779 evalue:1.5e-65 qcov:80.80 identity:31.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF13482;
pfam_desc RNase_H superfamily;
pfam_id RNase_H_2;
pfam_target db:Pfam-A.hmm|PF13482.6 evalue:5.8e-14 score:51.6 best_domain_score:50.5 name:RNase_H_2;
tigrfam_acc TIGR03491;
tigrfam_desc putative RecB family nuclease, TM0106 family;
tigrfam_name TIGR03491;
tigrfam_target db:TIGRFAMs.hmm|TIGR03491 evalue:1.9e-47 score:161.4 best_domain_score:114.5 name:TIGR03491;
34337 34867 CDS
ID metaerg.pl|02541
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
34943 36793 CDS
ID metaerg.pl|02542
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
37337 36843 CDS
ID metaerg.pl|02543
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__RBG-16-68-14;g__RBG-16-68-14;s__RBG-16-68-14 sp001796995;
genomedb_acc GCA_001796995.1;
genomedb_target db:genomedb|GCA_001796995.1|OGO51106.1 26 158 evalue:4.4e-28 qcov:81.10 identity:49.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF04214;
pfam_desc Protein of unknown function, DUF;
pfam_id DUF411;
pfam_target db:Pfam-A.hmm|PF04214.13 evalue:2.5e-30 score:103.5 best_domain_score:102.9 name:DUF411;
sp YES;
36843 36899 lipoprotein_signal_peptide
ID metaerg.pl|02544
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
38603 37524 CDS
ID metaerg.pl|02545
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
38985 40289 CDS
ID metaerg.pl|02546
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF11303;
pfam_desc Protein of unknown function (DUF3105);
pfam_id DUF3105;
pfam_target db:Pfam-A.hmm|PF11303.8 evalue:2.2e-12 score:46.5 best_domain_score:45.5 name:DUF3105;
40419 42962 CDS
ID metaerg.pl|02547
allec_ids 3.6.4.12;
allgo_ids GO:0005524; GO:0005737; GO:0004003; GO:0003677; GO:0006268;
genomedb_OC d__Bacteria;p__Firmicutes_C;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__UBA2897;s__UBA2897 sp900316275;
genomedb_acc GCA_900316275.1;
genomedb_target db:genomedb|GCA_900316275.1|ONCF01000103.1_4 99 846 evalue:1.6e-121 qcov:88.30 identity:38.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF13245; PF13604; PF00580; PF13361; PF13538;
pfam_desc AAA domain; AAA domain; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain; UvrD-like helicase C-terminal domain;
pfam_id AAA_19; AAA_30; UvrD-helicase; UvrD_C; UvrD_C_2;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:7.2e-32 score:110.0 best_domain_score:109.0 name:AAA_19; db:Pfam-A.hmm|PF13604.6 evalue:3.2e-07 score:29.5 best_domain_score:24.3 name:AAA_30; db:Pfam-A.hmm|PF00580.21 evalue:4.4e-64 score:216.2 best_domain_score:211.2 name:UvrD-helicase; db:Pfam-A.hmm|PF13361.6 evalue:1.4e-49 score:168.6 best_domain_score:90.5 name:UvrD_C; db:Pfam-A.hmm|PF13538.6 evalue:4.5e-08 score:32.0 best_domain_score:30.5 name:UvrD_C_2;
sprot_desc ATP-dependent DNA helicase PcrA;
sprot_id sp|P56255|PCRA_GEOSE;
sprot_target db:uniprot_sprot|sp|P56255|PCRA_GEOSE 99 843 evalue:5.7e-110 qcov:88.00 identity:34.50;
43361 43654 CDS
ID metaerg.pl|02548
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
44402 43908 CDS
ID metaerg.pl|02549
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
tm_num 2;
44402 43908 transmembrane_helix
ID metaerg.pl|02550
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i44082-44150o44163-44231i;
44997 44458 CDS
ID metaerg.pl|02551
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
45250 46548 CDS
ID metaerg.pl|02552
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
47651 46587 CDS
ID metaerg.pl|02553
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces griseus_I;
genomedb_acc GCF_000720255.1;
genomedb_target db:genomedb|GCF_000720255.1|WP_037682578.1 35 329 evalue:2.5e-36 qcov:83.30 identity:38.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF09664;
pfam_desc Protein of unknown function C-terminus (DUF2399);
pfam_id DUF2399;
pfam_target db:Pfam-A.hmm|PF09664.10 evalue:2.3e-05 score:23.6 best_domain_score:22.4 name:DUF2399;
52033 47648 CDS
ID metaerg.pl|02554
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia thermophila;
genomedb_acc GCF_900142365.1;
genomedb_target db:genomedb|GCF_900142365.1|WP_073454748.1 1 1446 evalue:1.4e-104 qcov:99.00 identity:31.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
52773 52033 CDS
ID metaerg.pl|02555
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Kibdelosporangium;s__Kibdelosporangium rhodnii;
genomedb_acc GCA_000720375.1;
genomedb_target db:genomedb|GCA_000720375.1|JOAA01000025.1_122 11 234 evalue:3.1e-33 qcov:91.10 identity:40.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
54292 52754 CDS
ID metaerg.pl|02556
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis orientalis_D;
genomedb_acc GCF_000411975.1;
genomedb_target db:genomedb|GCF_000411975.1|WP_037360313.1 24 493 evalue:4.3e-53 qcov:91.80 identity:35.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
55008 54532 CDS
ID metaerg.pl|02557
allgo_ids GO:0003697; GO:0006260;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442089.1 1 158 evalue:2.2e-53 qcov:100.00 identity:68.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF00436;
pfam_desc Single-strand binding protein family;
pfam_id SSB;
pfam_target db:Pfam-A.hmm|PF00436.25 evalue:2e-32 score:110.5 best_domain_score:110.2 name:SSB;
sprot_desc Single-stranded DNA-binding protein;
sprot_id sp|Q8KSB6|SSB_PAEAU;
sprot_target db:uniprot_sprot|sp|Q8KSB6|SSB_PAEAU 8 118 evalue:1.5e-27 qcov:70.30 identity:57.50;
tigrfam_acc TIGR00621;
tigrfam_desc single-stranded DNA-binding protein;
tigrfam_mainrole DNA metabolism;
tigrfam_name ssb;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00621 evalue:2.7e-37 score:127.8 best_domain_score:127.5 name:TIGR00621;
55173 55853 CDS
ID metaerg.pl|02558
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF08378;
pfam_desc Nuclease-related domain;
pfam_id NERD;
pfam_target db:Pfam-A.hmm|PF08378.11 evalue:6.3e-13 score:48.4 best_domain_score:47.9 name:NERD;
tm_num 2;
55173 55853 transmembrane_helix
ID metaerg.pl|02559
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i55230-55289o55302-55355i;
56076 56558 CDS
ID metaerg.pl|02560
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
sp YES;
tm_num 1;
56076 56165 signal_peptide
ID metaerg.pl|02561
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
56076 56558 transmembrane_helix
ID metaerg.pl|02562
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i56094-56162o;
58892 56613 CDS
ID metaerg.pl|02563
allgo_ids GO:0005524; GO:0019538;
allko_ids K02343; K02341; K03696;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Microtrichaceae;g__IMCC26207;s__IMCC26207 sp001025035;
genomedb_acc GCF_001025035.1;
genomedb_target db:genomedb|GCF_001025035.1|WP_052601709.1 1 746 evalue:3.3e-187 qcov:98.30 identity:47.20;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF00004; PF13191; PF07724; PF13401; PF07728; PF12775; PF17871; PF10431; PF02861; PF01695; PF01078; PF00910; PF05496; PF00158; PF06068; PF05621;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA ATPase domain; AAA domain (Cdc48 subfamily); AAA domain; AAA domain (dynein-related subfamily); P-loop containing dynein motor region; AAA lid domain; C-terminal, D2-small domain, of ClpB protein ; Clp amino terminal domain, pathogenicity island component; IstB-like ATP binding protein; Magnesium chelatase, subunit ChlI; RNA helicase; Holliday junction DNA helicase RuvB P-loop domain; Sigma-54 interaction domain; TIP49 P-loop domain; Bacterial TniB protein;
pfam_id AAA; AAA_16; AAA_2; AAA_22; AAA_5; AAA_7; AAA_lid_9; ClpB_D2-small; Clp_N; IstB_IS21; Mg_chelatase; RNA_helicase; RuvB_N; Sigma54_activat; TIP49; TniB;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:2.8e-26 score:91.8 best_domain_score:50.4 name:AAA; db:Pfam-A.hmm|PF13191.6 evalue:6.4e-15 score:55.2 best_domain_score:28.5 name:AAA_16; db:Pfam-A.hmm|PF07724.14 evalue:1.4e-51 score:174.3 best_domain_score:167.6 name:AAA_2; db:Pfam-A.hmm|PF13401.6 evalue:1.8e-10 score:40.4 best_domain_score:17.1 name:AAA_22; db:Pfam-A.hmm|PF07728.14 evalue:1.2e-17 score:63.4 best_domain_score:43.4 name:AAA_5; db:Pfam-A.hmm|PF12775.7 evalue:1e-06 score:27.6 best_domain_score:13.2 name:AAA_7; db:Pfam-A.hmm|PF17871.1 evalue:1.5e-23 score:81.9 best_domain_score:80.8 name:AAA_lid_9; db:Pfam-A.hmm|PF10431.9 evalue:1.1e-22 score:79.2 best_domain_score:77.6 name:ClpB_D2-small; db:Pfam-A.hmm|PF02861.20 evalue:1e-09 score:37.6 best_domain_score:34.2 name:Clp_N; db:Pfam-A.hmm|PF01695.17 evalue:6.8e-07 score:28.4 best_domain_score:14.7 name:IstB_IS21; db:Pfam-A.hmm|PF01078.21 evalue:2.3e-06 score:26.4 best_domain_score:8.9 name:Mg_chelatase; db:Pfam-A.hmm|PF00910.22 evalue:9.6e-05 score:22.0 best_domain_score:9.9 name:RNA_helicase; db:Pfam-A.hmm|PF05496.12 evalue:1.3e-06 score:27.5 best_domain_score:13.3 name:RuvB_N; db:Pfam-A.hmm|PF00158.26 evalue:1.4e-08 score:33.9 best_domain_score:25.2 name:Sigma54_activat; db:Pfam-A.hmm|PF06068.13 evalue:9.3e-07 score:27.6 best_domain_score:15.3 name:TIP49; db:Pfam-A.hmm|PF05621.11 evalue:9.1e-09 score:34.2 best_domain_score:20.0 name:TniB;
sprot_desc ATP-dependent Clp protease ATP-binding subunit ClpC1;
sprot_id sp|A0R574|CLPC1_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R574|CLPC1_MYCS2 1 736 evalue:1.9e-173 qcov:97.00 identity:44.00;
59036 60832 CDS
ID metaerg.pl|02564
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
60939 61274 CDS
ID metaerg.pl|02565
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
61509 61294 CDS
ID metaerg.pl|02566
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
61839 61594 CDS
ID metaerg.pl|02567
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Acidimicrobiaceae;g__Ferrithrix;s__Ferrithrix thermotolerans;
genomedb_acc GCF_900128965.1;
genomedb_target db:genomedb|GCF_900128965.1|WP_072790616.1 13 79 evalue:1.6e-18 qcov:82.70 identity:64.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF11238;
pfam_desc Protein of unknown function (DUF3039);
pfam_id DUF3039;
pfam_target db:Pfam-A.hmm|PF11238.8 evalue:9.5e-22 score:75.8 best_domain_score:75.4 name:DUF3039;
62228 61836 CDS
ID metaerg.pl|02568
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
63128 62337 CDS
ID metaerg.pl|02569
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
63282 63731 CDS
ID metaerg.pl|02570
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
63728 64513 CDS
ID metaerg.pl|02571
allgo_ids GO:0016020;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF02517;
pfam_desc CPBP intramembrane metalloprotease;
pfam_id CPBP;
pfam_target db:Pfam-A.hmm|PF02517.16 evalue:8.2e-06 score:25.3 best_domain_score:23.9 name:CPBP;
tm_num 6;
63728 64513 transmembrane_helix
ID metaerg.pl|02572
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i63824-63892o63920-63988i64025-64093o64151-64219i64238-64306o64394-64462i;
64510 65100 CDS
ID metaerg.pl|02573
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
65563 65141 CDS
ID metaerg.pl|02574
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
65877 65560 CDS
ID metaerg.pl|02575
allgo_ids GO:0030163;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces;s__Agromyces sp001620055;
genomedb_acc GCF_001620055.1;
genomedb_target db:genomedb|GCF_001620055.1|WP_067949504.1 23 98 evalue:9.1e-11 qcov:72.40 identity:43.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF02617;
pfam_desc ATP-dependent Clp protease adaptor protein ClpS;
pfam_id ClpS;
pfam_target db:Pfam-A.hmm|PF02617.17 evalue:1.8e-17 score:62.1 best_domain_score:61.8 name:ClpS;
66380 65958 CDS
ID metaerg.pl|02576
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF10708;
pfam_desc Protein of unknown function (DUF2510);
pfam_id DUF2510;
pfam_target db:Pfam-A.hmm|PF10708.9 evalue:9.7e-11 score:40.5 best_domain_score:40.5 name:DUF2510;
sp YES;
tm_num 2;
65958 66035 signal_peptide
ID metaerg.pl|02577
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
66380 65958 transmembrane_helix
ID metaerg.pl|02578
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i65976-66032o66060-66128i;
66933 66502 CDS
ID metaerg.pl|02579
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
sp YES;
66502 66552 signal_peptide
ID metaerg.pl|02580
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
67170 67415 CDS
ID metaerg.pl|02581
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
67565 69466 CDS
ID metaerg.pl|02582
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
sp YES;
67565 67648 lipoprotein_signal_peptide
ID metaerg.pl|02583
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
69934 69563 CDS
ID metaerg.pl|02584
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
70080 70322 CDS
ID metaerg.pl|02585
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
72018 70603 CDS
ID metaerg.pl|02586
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
73249 72290 CDS
ID metaerg.pl|02587
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
sp YES;
72290 72340 lipoprotein_signal_peptide
ID metaerg.pl|02588
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
74415 73249 CDS
ID metaerg.pl|02589
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
sp YES;
73249 73290 lipoprotein_signal_peptide
ID metaerg.pl|02590
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
74910 74701 CDS
ID metaerg.pl|02591
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
78198 75142 CDS
ID metaerg.pl|02592
allgo_ids GO:0003676; GO:0005524;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Modestobacter;s__Modestobacter caceresii;
genomedb_acc GCF_000761485.1;
genomedb_target db:genomedb|GCF_000761485.1|WP_036332759.1 4 1016 evalue:3.0e-268 qcov:99.50 identity:52.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF00270; PF04313; PF04851; PF18766;
pfam_desc DEAD/DEAH box helicase; Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; SWI2/SNF2 ATPase;
pfam_id DEAD; HSDR_N; ResIII; SWI2_SNF2;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:9.2e-08 score:31.3 best_domain_score:29.8 name:DEAD; db:Pfam-A.hmm|PF04313.14 evalue:7.7e-11 score:41.5 best_domain_score:40.2 name:HSDR_N; db:Pfam-A.hmm|PF04851.15 evalue:1.6e-15 score:56.7 best_domain_score:55.4 name:ResIII; db:Pfam-A.hmm|PF18766.1 evalue:2.5e-25 score:88.7 best_domain_score:75.9 name:SWI2_SNF2;
79343 78198 CDS
ID metaerg.pl|02593
allgo_ids GO:0003677; GO:0006304;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp001514305;
genomedb_acc GCF_001514305.1;
genomedb_target db:genomedb|GCF_001514305.1|WP_079084870.1 1 381 evalue:3.5e-100 qcov:100.00 identity:49.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF01420;
pfam_desc Type I restriction modification DNA specificity domain;
pfam_id Methylase_S;
pfam_target db:Pfam-A.hmm|PF01420.19 evalue:2.3e-14 score:53.2 best_domain_score:26.1 name:Methylase_S;
81400 79427 CDS
ID metaerg.pl|02594
allgo_ids GO:0003677; GO:0006306; GO:0008170;
genomedb_OC d__Bacteria;p__Dormibacterota;c__Dormibacteria;o__Dormibacterales;f__Dormibacteraceae;g__Dormibacter;s__Dormibacter sp003244185;
genomedb_acc GCA_003244185.1;
genomedb_target db:genomedb|GCA_003244185.1|PZR66357.1 11 657 evalue:2.9e-219 qcov:98.50 identity:57.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF12161; PF02384;
pfam_desc HsdM N-terminal domain; N-6 DNA Methylase;
pfam_id HsdM_N; N6_Mtase;
pfam_target db:Pfam-A.hmm|PF12161.8 evalue:1.1e-20 score:73.9 best_domain_score:71.3 name:HsdM_N; db:Pfam-A.hmm|PF02384.16 evalue:4.7e-56 score:189.6 best_domain_score:189.0 name:N6_Mtase;
84960 81877 CDS
ID metaerg.pl|02595
allec_ids 1.17.4.1;
allgo_ids GO:0004748; GO:0050897; GO:0055114; GO:0031419; GO:0000166; GO:0071897; GO:0006260;
allko_ids K00525; K10807; K00527;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA11373;g__UBA11373;s__UBA11373 sp003486285;
genomedb_acc GCA_003486285.1;
genomedb_target db:genomedb|GCA_003486285.1|HAX82496.1 16 1027 evalue:8.3e-258 qcov:98.50 identity:45.30;
kegg_pathway_id 00480; 00230; 00240;
kegg_pathway_name Glutathione metabolism; Purine metabolism; Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6125; PWY0-166; PWY-6126; PRPP-PWY; PWY-6545;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of guanosine nucleotides de novo biosynthesis II;; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; pyrimidine deoxyribonucleotides de novo biosynthesis III;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;;
pfam_acc PF08471; PF02867;
pfam_desc Class II vitamin B12-dependent ribonucleotide reductase; Ribonucleotide reductase, barrel domain;
pfam_id Ribonuc_red_2_N; Ribonuc_red_lgC;
pfam_target db:Pfam-A.hmm|PF08471.10 evalue:1e-21 score:76.2 best_domain_score:75.2 name:Ribonuc_red_2_N; db:Pfam-A.hmm|PF02867.15 evalue:1.7e-111 score:372.6 best_domain_score:372.1 name:Ribonuc_red_lgC;
sprot_desc Vitamin B12-dependent ribonucleotide reductase;
sprot_id sp|Q82KE2|NRDJ_STRAW;
sprot_target db:uniprot_sprot|sp|Q82KE2|NRDJ_STRAW 19 928 evalue:5.7e-189 qcov:88.60 identity:43.00;
tigrfam_acc TIGR02504;
tigrfam_desc ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name NrdJ_Z;
tigrfam_sub1role 2'-Deoxyribonucleotide metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR02504 evalue:3.2e-148 score:494.1 best_domain_score:493.8 name:TIGR02504;
87796 85301 CDS
ID metaerg.pl|02596
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
tm_num 1;
87796 85301 transmembrane_helix
ID metaerg.pl|02597
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i85337-85405o;
87942 88472 CDS
ID metaerg.pl|02598
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
sp YES;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:2.6e-05 score:23.0 best_domain_score:21.7 name:TIGR02532;
tm_num 1;
87942 88031 signal_peptide
ID metaerg.pl|02599
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
87942 88472 transmembrane_helix
ID metaerg.pl|02600
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i87978-88046o;
88784 88509 CDS
ID metaerg.pl|02601
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
tm_num 1;
88784 88509 transmembrane_helix
ID metaerg.pl|02602
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology o88674-88742i;
89892 88828 CDS
ID metaerg.pl|02603
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
tm_num 1;
89892 88828 transmembrane_helix
ID metaerg.pl|02604
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology o89365-89418i;
90284 89907 CDS
ID metaerg.pl|02605
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
sp YES;
tm_num 1;
89907 90041 signal_peptide
ID metaerg.pl|02606
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
90284 89907 transmembrane_helix
ID metaerg.pl|02607
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i89943-90011o;
90752 91180 CDS
ID metaerg.pl|02608
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF07963;
pfam_desc Prokaryotic N-terminal methylation motif;
pfam_id N_methyl;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:1.1e-08 score:33.5 best_domain_score:32.6 name:N_methyl;
sp YES;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:2e-09 score:36.1 best_domain_score:35.3 name:TIGR02532;
tm_num 1;
90752 90856 signal_peptide
ID metaerg.pl|02609
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
90752 91180 transmembrane_helix
ID metaerg.pl|02610
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i90788-90856o;
91342 91698 CDS
ID metaerg.pl|02611
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
91856 93118 CDS
ID metaerg.pl|02612
allgo_ids GO:0005515;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF00041; PF07963;
pfam_desc Fibronectin type III domain; Prokaryotic N-terminal methylation motif;
pfam_id fn3; N_methyl;
pfam_target db:Pfam-A.hmm|PF00041.21 evalue:9.1e-06 score:25.2 best_domain_score:23.6 name:fn3; db:Pfam-A.hmm|PF07963.12 evalue:6.8e-07 score:27.8 best_domain_score:26.9 name:N_methyl;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:1.6e-07 score:30.1 best_domain_score:29.3 name:TIGR02532;
tm_num 1;
91856 93118 transmembrane_helix
ID metaerg.pl|02613
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i91892-91960o;
93698 93156 CDS
ID metaerg.pl|02614
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
94002 94622 CDS
ID metaerg.pl|02615
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA11373;g__UBA11373;s__UBA11373 sp003486285;
genomedb_acc GCA_003486285.1;
genomedb_target db:genomedb|GCA_003486285.1|HAX81224.1 3 199 evalue:8.9e-18 qcov:95.60 identity:38.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
sp YES;
tm_num 1;
94002 94097 signal_peptide
ID metaerg.pl|02616
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
94002 94622 transmembrane_helix
ID metaerg.pl|02617
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i94035-94103o;
94721 96025 CDS
ID metaerg.pl|02618
allec_ids 3.4.21.89;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
tigrfam_acc TIGR02228;
tigrfam_desc signal peptidase I;
tigrfam_name sigpep_I_arch;
tigrfam_target db:TIGRFAMs.hmm|TIGR02228 evalue:9.8e-18 score:63.7 best_domain_score:63.1 name:TIGR02228;
tm_num 1;
94721 96025 transmembrane_helix
ID metaerg.pl|02619
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i94781-94849o;
96454 97206 CDS
ID metaerg.pl|02620
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
tm_num 1;
96454 97206 transmembrane_helix
ID metaerg.pl|02621
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i96559-96627o;
97348 98508 CDS
ID metaerg.pl|02622
allgo_ids GO:0006508; GO:0008236;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Haloactinopolyspora;s__Haloactinopolyspora alba;
genomedb_acc GCF_003014555.1;
genomedb_target db:genomedb|GCF_003014555.1|WP_106537201.1 5 386 evalue:4.7e-36 qcov:99.00 identity:33.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF00561; PF12146; PF00326;
pfam_desc alpha/beta hydrolase fold; Serine aminopeptidase, S33; Prolyl oligopeptidase family;
pfam_id Abhydrolase_1; Hydrolase_4; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:9.5e-11 score:41.0 best_domain_score:27.6 name:Abhydrolase_1; db:Pfam-A.hmm|PF12146.8 evalue:9.9e-13 score:47.1 best_domain_score:22.5 name:Hydrolase_4; db:Pfam-A.hmm|PF00326.21 evalue:3.4e-06 score:25.9 best_domain_score:24.4 name:Peptidase_S9;
sp YES;
tm_num 1;
97348 97434 signal_peptide
ID metaerg.pl|02623
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
97348 98508 transmembrane_helix
ID metaerg.pl|02624
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i97372-97440o;
99654 98572 CDS
ID metaerg.pl|02625
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
100188 99811 CDS
ID metaerg.pl|02626
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF10708;
pfam_desc Protein of unknown function (DUF2510);
pfam_id DUF2510;
pfam_target db:Pfam-A.hmm|PF10708.9 evalue:1.3e-06 score:27.3 best_domain_score:26.1 name:DUF2510;
tm_num 1;
100188 99811 transmembrane_helix
ID metaerg.pl|02627
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i100036-100095o;
101515 100799 CDS
ID metaerg.pl|02628
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus telluris;
genomedb_acc GCF_900102745.1;
genomedb_target db:genomedb|GCF_900102745.1|WP_091368233.1 16 225 evalue:3.2e-27 qcov:88.20 identity:39.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
102040 102246 CDS
ID metaerg.pl|02629
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
104370 102355 CDS
ID metaerg.pl|02630
allec_ids 6.5.1.2;
allgo_ids GO:0003911; GO:0005829; GO:0046872; GO:0006288; GO:0006260;
allko_ids K01972;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes;s__Actinoplanes ferrugineum;
genomedb_acc GCF_003002065.1;
genomedb_target db:genomedb|GCF_003002065.1|WP_106125494.1 5 667 evalue:3.9e-171 qcov:98.80 identity:51.20;
kegg_pathway_id 03410; 03030; 03420; 03430;
kegg_pathway_name Base excision repair; DNA replication; Nucleotide excision repair; Mismatch repair;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF00533; PF01653; PF03120; PF12826; PF14520; PF12738;
pfam_desc BRCA1 C Terminus (BRCT) domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase OB-fold domain; Helix-hairpin-helix motif; Helix-hairpin-helix domain; twin BRCT domain;
pfam_id BRCT; DNA_ligase_aden; DNA_ligase_OB; HHH_2; HHH_5; PTCB-BRCT;
pfam_target db:Pfam-A.hmm|PF00533.26 evalue:1.8e-08 score:33.9 best_domain_score:33.1 name:BRCT; db:Pfam-A.hmm|PF01653.18 evalue:3.8e-73 score:245.6 best_domain_score:245.1 name:DNA_ligase_aden; db:Pfam-A.hmm|PF03120.16 evalue:6.4e-31 score:105.3 best_domain_score:104.1 name:DNA_ligase_OB; db:Pfam-A.hmm|PF12826.7 evalue:1.7e-06 score:27.2 best_domain_score:22.8 name:HHH_2; db:Pfam-A.hmm|PF14520.6 evalue:8.7e-11 score:41.5 best_domain_score:22.5 name:HHH_5; db:Pfam-A.hmm|PF12738.7 evalue:8.2e-06 score:24.9 best_domain_score:24.1 name:PTCB-BRCT;
sprot_desc DNA ligase 2;
sprot_id sp|Q93IZ8|DNLJ2_STRCO;
sprot_target db:uniprot_sprot|sp|Q93IZ8|DNLJ2_STRCO 10 658 evalue:1.1e-143 qcov:96.70 identity:46.00;
tigrfam_acc TIGR00575;
tigrfam_desc DNA ligase, NAD-dependent;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnlj;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00575 evalue:1.6e-181 score:604.2 best_domain_score:603.9 name:TIGR00575;
104551 106809 CDS
ID metaerg.pl|02631
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108668128.1 25 744 evalue:7.0e-105 qcov:95.70 identity:36.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF07698; PF07697; PF01966;
pfam_desc 7TM receptor with intracellular HD hydrolase; 7TM-HD extracellular; HD domain;
pfam_id 7TM-7TMR_HD; 7TMR-HDED; HD;
pfam_target db:Pfam-A.hmm|PF07698.11 evalue:5e-09 score:35.4 best_domain_score:35.4 name:7TM-7TMR_HD; db:Pfam-A.hmm|PF07697.11 evalue:2e-29 score:102.5 best_domain_score:102.5 name:7TMR-HDED; db:Pfam-A.hmm|PF01966.22 evalue:2.8e-16 score:59.1 best_domain_score:58.2 name:HD;
sp YES;
tigrfam_acc TIGR00277;
tigrfam_desc HDIG domain;
tigrfam_name HDIG;
tigrfam_target db:TIGRFAMs.hmm|TIGR00277 evalue:2.8e-20 score:71.1 best_domain_score:70.0 name:TIGR00277;
tm_num 6;
104551 104667 signal_peptide
ID metaerg.pl|02632
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
104551 106809 transmembrane_helix
ID metaerg.pl|02633
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i104608-104676o105583-105651i105688-105756o105799-105858i105877-105945o105973-106041i;
106961 107206 CDS
ID metaerg.pl|02634
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
107388 108266 CDS
ID metaerg.pl|02635
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0003677; GO:0016987;
allko_ids K03087;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Chloroflexia;o__Thermomicrobiales;f__Thermomicrobiaceae;g__Sphaerobacter;s__Sphaerobacter thermophilus;
genomedb_acc GCF_000024985.1;
genomedb_target db:genomedb|GCF_000024985.1|WP_052295400.1 13 285 evalue:3.6e-33 qcov:93.50 identity:37.10;
kegg_pathway_id 03020; 05111;
kegg_pathway_name RNA polymerase; Vibrio cholerae pathogenic cycle;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF04542; PF04539; PF04545;
pfam_desc Sigma-70 region 2 ; Sigma-70 region 3; Sigma-70, region 4;
pfam_id Sigma70_r2; Sigma70_r3; Sigma70_r4;
pfam_target db:Pfam-A.hmm|PF04542.14 evalue:1.5e-12 score:46.3 best_domain_score:44.9 name:Sigma70_r2; db:Pfam-A.hmm|PF04539.16 evalue:3.7e-06 score:26.2 best_domain_score:25.2 name:Sigma70_r3; db:Pfam-A.hmm|PF04545.16 evalue:2.5e-13 score:48.5 best_domain_score:41.5 name:Sigma70_r4;
sprot_desc RNA polymerase sigma-B factor;
sprot_id sp|Q03065|RPSB_NOSS1;
sprot_target db:uniprot_sprot|sp|Q03065|RPSB_NOSS1 62 292 evalue:1.9e-20 qcov:79.10 identity:30.60;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:1.2e-24 score:86.0 best_domain_score:84.4 name:TIGR02937;
108639 108331 CDS
ID metaerg.pl|02636
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
111107 108702 CDS
ID metaerg.pl|02637
allec_ids 5.6.2.3;
allgo_ids GO:0003677; GO:0003916; GO:0005524; GO:0005694; GO:0006265; GO:0005737; GO:0003918; GO:0006261;
allko_ids K02469;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae_A;g__Streptomyces_F;s__Streptomyces_F thermoautotrophicus;
genomedb_acc GCF_001543895.1;
genomedb_target db:genomedb|GCF_001543895.1|WP_066885710.1 10 800 evalue:1.3e-189 qcov:98.80 identity:49.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF03989; PF00521;
pfam_desc DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A;
pfam_id DNA_gyraseA_C; DNA_topoisoIV;
pfam_target db:Pfam-A.hmm|PF03989.13 evalue:3.7e-27 score:92.8 best_domain_score:39.4 name:DNA_gyraseA_C; db:Pfam-A.hmm|PF00521.20 evalue:9.3e-141 score:468.8 best_domain_score:468.5 name:DNA_topoisoIV;
sprot_desc DNA gyrase subunit A;
sprot_id sp|P0C0R0|GYRA_STAES;
sprot_target db:uniprot_sprot|sp|P0C0R0|GYRA_STAES 11 705 evalue:2.7e-146 qcov:86.80 identity:42.50;
111680 111276 CDS
ID metaerg.pl|02638
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF00011;
pfam_desc Hsp20/alpha crystallin family;
pfam_id HSP20;
pfam_target db:Pfam-A.hmm|PF00011.21 evalue:3.6e-06 score:26.3 best_domain_score:25.1 name:HSP20;
112060 113880 CDS
ID metaerg.pl|02639
allko_ids K01448; K01225; K01179; K01183; K01181;
kegg_pathway_id 00550; 00500; 00530;
kegg_pathway_name Peptidoglycan biosynthesis; Starch and sucrose metabolism; Aminosugars metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF00415; PF13540; PF00395;
pfam_desc Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1) repeat; S-layer homology domain;
pfam_id RCC1; RCC1_2; SLH;
pfam_target db:Pfam-A.hmm|PF00415.18 evalue:3.1e-44 score:148.6 best_domain_score:31.6 name:RCC1; db:Pfam-A.hmm|PF13540.6 evalue:1.4e-60 score:199.2 best_domain_score:42.4 name:RCC1_2; db:Pfam-A.hmm|PF00395.20 evalue:3.2e-25 score:87.1 best_domain_score:36.9 name:SLH;
sp YES;
tm_num 1;
112060 112170 signal_peptide
ID metaerg.pl|02640
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
112060 113880 transmembrane_helix
ID metaerg.pl|02641
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i112096-112164o;
114811 113936 CDS
ID metaerg.pl|02642
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus sp900188025;
genomedb_acc GCF_900188025.1;
genomedb_target db:genomedb|GCF_900188025.1|WP_089336602.1 20 285 evalue:7.1e-29 qcov:91.40 identity:39.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
115499 115272 CDS
ID metaerg.pl|02643
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
115718 116719 CDS
ID metaerg.pl|02644
allgo_ids GO:0009294;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF02481;
pfam_desc DNA recombination-mediator protein A;
pfam_id DNA_processg_A;
pfam_target db:Pfam-A.hmm|PF02481.15 evalue:1.2e-10 score:40.3 best_domain_score:39.8 name:DNA_processg_A;
117232 116735 CDS
ID metaerg.pl|02645
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
sp YES;
116735 116797 lipoprotein_signal_peptide
ID metaerg.pl|02646
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
117720 119468 CDS
ID metaerg.pl|02647
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces hyaluromycini;
genomedb_acc GCF_002217755.1;
genomedb_target db:genomedb|GCF_002217755.1|WP_089101517.1 57 581 evalue:4.1e-28 qcov:90.20 identity:28.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
120001 122001 CDS
ID metaerg.pl|02648
allec_ids 2.7.6.5;
allgo_ids GO:0015969; GO:0005524; GO:0005525; GO:0008728; GO:0016301; GO:0015970;
allko_ids K00951; K01139;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__MedAcidi-G1;g__UBA9410;s__UBA9410 sp002714485;
genomedb_acc GCA_002714485.1;
genomedb_target db:genomedb|GCA_002714485.1|MBF43052.1 8 661 evalue:5.6e-130 qcov:98.20 identity:40.80;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
metacyc_pathway_id PPGPPMET-PWY;
metacyc_pathway_name ppGpp biosynthesis;;
metacyc_pathway_type Metabolic-Regulators;;
pfam_acc PF01966; PF13328; PF04607; PF02824;
pfam_desc HD domain; HD domain; Region found in RelA / SpoT proteins; TGS domain;
pfam_id HD; HD_4; RelA_SpoT; TGS;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:3.1e-06 score:26.6 best_domain_score:26.6 name:HD; db:Pfam-A.hmm|PF13328.6 evalue:2.7e-40 score:136.9 best_domain_score:136.9 name:HD_4; db:Pfam-A.hmm|PF04607.17 evalue:1.4e-29 score:101.9 best_domain_score:101.0 name:RelA_SpoT; db:Pfam-A.hmm|PF02824.21 evalue:4.9e-15 score:54.6 best_domain_score:53.1 name:TGS;
sprot_desc GTP pyrophosphokinase;
sprot_id sp|P52560|RELA_STRCO;
sprot_target db:uniprot_sprot|sp|P52560|RELA_STRCO 38 584 evalue:6.5e-117 qcov:82.10 identity:43.20;
tigrfam_acc TIGR00691;
tigrfam_desc RelA/SpoT family protein;
tigrfam_mainrole Cellular processes;
tigrfam_name spoT_relA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00691 evalue:1.3e-165 score:551.6 best_domain_score:545.3 name:TIGR00691;
122140 123264 CDS
ID metaerg.pl|02649
allgo_ids GO:0003887; GO:0006260; GO:0008408; GO:0009360;
allko_ids K02338;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__SEOHO-28;s__SEOHO-28 sp003044185;
genomedb_acc GCF_003044185.1;
genomedb_target db:genomedb|GCF_003044185.1|WP_107567662.1 62 374 evalue:3.0e-16 qcov:83.70 identity:29.20;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF02767;
pfam_desc DNA polymerase III beta subunit, central domain;
pfam_id DNA_pol3_beta_2;
pfam_target db:Pfam-A.hmm|PF02767.16 evalue:6.6e-07 score:28.8 best_domain_score:27.4 name:DNA_pol3_beta_2;
123383 125968 CDS
ID metaerg.pl|02650
allgo_ids GO:0008658;
allko_ids K08884; K08282; K05366; K04478; K03814; K12555; K03587; K08384; K05365;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664745.1 11 840 evalue:2.5e-98 qcov:96.30 identity:34.10;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
pfam_acc PF03793; PF00912; PF00905;
pfam_desc PASTA domain; Transglycosylase; Penicillin binding protein transpeptidase domain;
pfam_id PASTA; Transgly; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF03793.19 evalue:1.2e-11 score:43.6 best_domain_score:22.9 name:PASTA; db:Pfam-A.hmm|PF00912.22 evalue:2.4e-59 score:199.0 best_domain_score:198.5 name:Transgly; db:Pfam-A.hmm|PF00905.22 evalue:2.4e-14 score:52.5 best_domain_score:50.0 name:Transpeptidase;
tm_num 1;
123383 125968 transmembrane_helix
ID metaerg.pl|02651
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.00567486; ; 17.4238; 0.00700218; 17.4365;
topology i123419-123487o;
>Feature NODE_13_length_120771_cov_7.29602
1 933 CDS
ID metaerg.pl|02652
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Tc-Br11-B2g6-7;s__Tc-Br11-B2g6-7 sp001564055;
genomedb_acc GCA_001564055.1;
genomedb_target db:genomedb|GCA_001564055.1|LKNB01000023.1_4 1 307 evalue:3.6e-95 qcov:99.00 identity:57.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:1.1e-16 score:60.4 best_domain_score:59.5 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:5e-09 score:35.4 best_domain_score:32.3 name:Amidohydro_3;
930 2270 CDS
ID metaerg.pl|02653
allec_ids 6.3.4.21;
allgo_ids GO:0004514; GO:0009435; GO:0004516; GO:0019358;
allko_ids K00763;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio;s__Thioalkalivibrio sp000377405;
genomedb_acc GCF_000377405.1;
genomedb_target db:genomedb|GCF_000377405.1|WP_018876379.1 7 439 evalue:3.4e-147 qcov:97.10 identity:64.20;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF04095; PF17767; PF01729;
pfam_desc Nicotinate phosphoribosyltransferase (NAPRTase) family; Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain; Quinolinate phosphoribosyl transferase, C-terminal domain;
pfam_id NAPRTase; NAPRTase_N; QRPTase_C;
pfam_target db:Pfam-A.hmm|PF04095.16 evalue:1.2e-09 score:37.4 best_domain_score:36.8 name:NAPRTase; db:Pfam-A.hmm|PF17767.1 evalue:7.6e-34 score:116.0 best_domain_score:115.0 name:NAPRTase_N; db:Pfam-A.hmm|PF01729.19 evalue:1e-06 score:27.8 best_domain_score:27.3 name:QRPTase_C;
sprot_desc Nicotinate phosphoribosyltransferase pncB2;
sprot_id sp|P9WJI6|PNCB2_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WJI6|PNCB2_MYCTO 7 432 evalue:1.3e-121 qcov:95.50 identity:53.80;
tigrfam_acc TIGR01513;
tigrfam_desc nicotinate phosphoribosyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name NAPRTase_put;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01513 evalue:2.6e-145 score:484.0 best_domain_score:481.9 name:TIGR01513;
3469 2282 CDS
ID metaerg.pl|02654
allko_ids K15864; K00368;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000001.1_96 21 389 evalue:2.0e-106 qcov:93.40 identity:53.00;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF02239; PF10282;
pfam_desc Cytochrome D1 heme domain; Lactonase, 7-bladed beta-propeller;
pfam_id Cytochrom_D1; Lactonase;
pfam_target db:Pfam-A.hmm|PF02239.16 evalue:3.7e-08 score:31.5 best_domain_score:20.0 name:Cytochrom_D1; db:Pfam-A.hmm|PF10282.9 evalue:3e-07 score:29.2 best_domain_score:20.2 name:Lactonase;
sp YES;
2282 2353 signal_peptide
ID metaerg.pl|02655
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
5597 3483 CDS
ID metaerg.pl|02656
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000003.1_113 27 699 evalue:1.4e-211 qcov:95.60 identity:53.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF02368; PF08309;
pfam_desc Bacterial Ig-like domain (group 2); LVIVD repeat;
pfam_id Big_2; LVIVD;
pfam_target db:Pfam-A.hmm|PF02368.18 evalue:4.1e-08 score:32.2 best_domain_score:28.2 name:Big_2; db:Pfam-A.hmm|PF08309.11 evalue:1.4e-06 score:26.7 best_domain_score:8.4 name:LVIVD;
sp YES;
tm_num 1;
3483 3608 signal_peptide
ID metaerg.pl|02657
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
5597 3483 transmembrane_helix
ID metaerg.pl|02658
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i3528-3596o;
5813 7894 CDS
ID metaerg.pl|02659
allec_ids 3.4.21.-;
allgo_ids GO:0016787; GO:0004252;
allko_ids K01730; K01303;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Longimonas;s__Longimonas halophila;
genomedb_acc GCF_002554705.1;
genomedb_target db:genomedb|GCF_002554705.1|WP_098062958.1 31 690 evalue:8.0e-196 qcov:95.20 identity:50.60;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01738; PF00930; PF10647; PF12146; PF07676; PF00326;
pfam_desc Dienelactone hydrolase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; Lipoprotein LpqB beta-propeller domain; Serine aminopeptidase, S33; WD40-like Beta Propeller Repeat; Prolyl oligopeptidase family;
pfam_id DLH; DPPIV_N; Gmad1; Hydrolase_4; PD40; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF01738.18 evalue:0.00012 score:20.9 best_domain_score:18.4 name:DLH; db:Pfam-A.hmm|PF00930.21 evalue:2.1e-09 score:35.9 best_domain_score:11.2 name:DPPIV_N; db:Pfam-A.hmm|PF10647.9 evalue:1.3e-08 score:34.1 best_domain_score:21.0 name:Gmad1; db:Pfam-A.hmm|PF12146.8 evalue:8.2e-07 score:27.8 best_domain_score:13.6 name:Hydrolase_4; db:Pfam-A.hmm|PF07676.12 evalue:4.4e-18 score:64.0 best_domain_score:19.2 name:PD40; db:Pfam-A.hmm|PF00326.21 evalue:9.3e-45 score:151.9 best_domain_score:151.4 name:Peptidase_S9;
sp YES;
sprot_desc Uncharacterized peptidase YuxL;
sprot_id sp|P39839|YUXL_BACSU;
sprot_target db:uniprot_sprot|sp|P39839|YUXL_BACSU 50 688 evalue:9.2e-66 qcov:92.20 identity:28.80;
tm_num 1;
5813 5938 signal_peptide
ID metaerg.pl|02660
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
5813 7894 transmembrane_helix
ID metaerg.pl|02661
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i5870-5938o;
7891 9366 CDS
ID metaerg.pl|02662
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD50073.1 8 489 evalue:6.0e-121 qcov:98.20 identity:47.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01189; PF01135;
pfam_desc 16S rRNA methyltransferase RsmB/F; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
pfam_id Methyltr_RsmB-F; PCMT;
pfam_target db:Pfam-A.hmm|PF01189.17 evalue:2.1e-51 score:173.7 best_domain_score:173.3 name:Methyltr_RsmB-F; db:Pfam-A.hmm|PF01135.19 evalue:1.8e-05 score:23.9 best_domain_score:23.3 name:PCMT;
9485 10804 CDS
ID metaerg.pl|02663
allec_ids 1.14.99.50;
allgo_ids GO:0005506; GO:0004497; GO:0016705; GO:0052699;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Salisaeta;s__Salisaeta longa;
genomedb_acc GCF_000419585.1;
genomedb_target db:genomedb|GCF_000419585.1|WP_022835352.1 8 439 evalue:1.1e-158 qcov:98.40 identity:62.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF12867; PF03781;
pfam_desc DinB superfamily; Sulfatase-modifying factor enzyme 1;
pfam_id DinB_2; FGE-sulfatase;
pfam_target db:Pfam-A.hmm|PF12867.7 evalue:4.1e-10 score:39.5 best_domain_score:38.7 name:DinB_2; db:Pfam-A.hmm|PF03781.16 evalue:1.9e-31 score:108.8 best_domain_score:104.5 name:FGE-sulfatase;
sprot_desc Hercynine oxygenase;
sprot_id sp|G7CFI3|EGTB_MYCT3;
sprot_target db:uniprot_sprot|sp|G7CFI3|EGTB_MYCT3 9 439 evalue:3.5e-42 qcov:98.20 identity:31.90;
tigrfam_acc TIGR03440;
tigrfam_desc ergothioneine biosynthesis protein EgtB;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name egtB_TIGR03440;
tigrfam_sub1role Glutathione and analogs;
tigrfam_target db:TIGRFAMs.hmm|TIGR03440 evalue:4.2e-162 score:539.3 best_domain_score:539.0 name:TIGR03440;
10819 11775 CDS
ID metaerg.pl|02664
allec_ids 2.1.1.44;
allgo_ids GO:0030745; GO:0008276; GO:0052704; GO:0052707;
allko_ids K18911;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium;s__Phenylobacterium sp001824475;
genomedb_acc GCA_001824475.1;
genomedb_target db:genomedb|GCA_001824475.1|OHB27236.1 2 312 evalue:4.9e-76 qcov:97.80 identity:50.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF10017;
pfam_desc Histidine-specific methyltransferase, SAM-dependent;
pfam_id Methyltransf_33;
pfam_target db:Pfam-A.hmm|PF10017.9 evalue:1.6e-99 score:332.2 best_domain_score:332.0 name:Methyltransf_33;
sprot_desc Histidine N-alpha-methyltransferase;
sprot_id sp|A0R5M8|EGTD_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R5M8|EGTD_MYCS2 2 317 evalue:3.6e-57 qcov:99.40 identity:43.80;
tigrfam_acc TIGR03438;
tigrfam_desc dimethylhistidine N-methyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name egtD_ergothio;
tigrfam_sub1role Glutathione and analogs;
tigrfam_target db:TIGRFAMs.hmm|TIGR03438 evalue:2.2e-109 score:364.5 best_domain_score:364.3 name:TIGR03438;
12819 11839 CDS
ID metaerg.pl|02665
allgo_ids GO:0008612;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000028.1_48 1 326 evalue:2.2e-143 qcov:100.00 identity:72.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01916;
pfam_desc Deoxyhypusine synthase;
pfam_id DS;
pfam_target db:Pfam-A.hmm|PF01916.17 evalue:5.8e-37 score:126.7 best_domain_score:126.3 name:DS;
13165 15795 CDS
ID metaerg.pl|02666
allko_ids K01212; K00689; K01200; K03332;
kegg_pathway_id 00500; 02020; 00051;
kegg_pathway_name Starch and sucrose metabolism; Two-component system - General; Fructose and mannose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF02369; PF02368; PF09134;
pfam_desc Bacterial Ig-like domain (group 1); Bacterial Ig-like domain (group 2); Invasin, domain 3;
pfam_id Big_1; Big_2; Invasin_D3;
pfam_target db:Pfam-A.hmm|PF02369.16 evalue:1.8e-22 score:78.3 best_domain_score:26.8 name:Big_1; db:Pfam-A.hmm|PF02368.18 evalue:3.2e-16 score:58.2 best_domain_score:27.8 name:Big_2; db:Pfam-A.hmm|PF09134.10 evalue:8.7e-09 score:34.8 best_domain_score:18.0 name:Invasin_D3;
sp YES;
13165 13230 lipoprotein_signal_peptide
ID metaerg.pl|02667
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
16779 15817 CDS
ID metaerg.pl|02668
allko_ids K02016;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Variibacter;s__Variibacter gotjawalensis;
genomedb_acc GCF_002355335.1;
genomedb_target db:genomedb|GCF_002355335.1|WP_096356150.1 17 317 evalue:2.7e-90 qcov:94.10 identity:55.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01497;
pfam_desc Periplasmic binding protein;
pfam_id Peripla_BP_2;
pfam_target db:Pfam-A.hmm|PF01497.18 evalue:1e-14 score:53.9 best_domain_score:53.3 name:Peripla_BP_2;
16859 18583 CDS
ID metaerg.pl|02669
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000116.1_32 2 567 evalue:1.3e-170 qcov:98.60 identity:58.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF09818;
pfam_desc Predicted ATPase of the ABC class;
pfam_id ABC_ATPase;
pfam_target db:Pfam-A.hmm|PF09818.9 evalue:5.2e-171 score:568.6 best_domain_score:568.3 name:ABC_ATPase;
18629 19015 CDS
ID metaerg.pl|02670
allgo_ids GO:0006355;
allko_ids K00971;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-544;s__SZUA-544 sp003251175;
genomedb_acc GCA_003251175.1;
genomedb_target db:genomedb|GCA_003251175.1|QKHC01000082.1_6 4 116 evalue:2.8e-30 qcov:88.30 identity:56.60;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF02311; PF00190; PF07883;
pfam_desc AraC-like ligand binding domain; Cupin; Cupin domain;
pfam_id AraC_binding; Cupin_1; Cupin_2;
pfam_target db:Pfam-A.hmm|PF02311.19 evalue:1.5e-07 score:30.6 best_domain_score:30.0 name:AraC_binding; db:Pfam-A.hmm|PF00190.22 evalue:9.5e-06 score:24.5 best_domain_score:23.9 name:Cupin_1; db:Pfam-A.hmm|PF07883.11 evalue:1.8e-15 score:55.7 best_domain_score:55.2 name:Cupin_2;
19012 20709 CDS
ID metaerg.pl|02671
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
20696 22318 CDS
ID metaerg.pl|02672
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89520.1 15 536 evalue:4.3e-181 qcov:96.70 identity:64.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF03553;
pfam_desc Na+/H+ antiporter family;
pfam_id Na_H_antiporter;
pfam_target db:Pfam-A.hmm|PF03553.14 evalue:6.7e-46 score:156.1 best_domain_score:156.1 name:Na_H_antiporter;
sprot_desc hypothetical protein;
sprot_id sp|P44263|Y1586_HAEIN;
sprot_target db:uniprot_sprot|sp|P44263|Y1586_HAEIN 66 530 evalue:3.6e-33 qcov:86.10 identity:27.50;
tm_num 12;
20696 22318 transmembrane_helix
ID metaerg.pl|02673
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i20789-20842o20870-20935i20954-21022o21050-21118i21176-21244o21311-21379i21440-21508o21650-21718i21737-21805o21869-21937i21971-22039o22238-22306i;
22616 22371 CDS
ID metaerg.pl|02674
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000001.1_155 3 60 evalue:3.4e-13 qcov:71.60 identity:70.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
23408 22731 CDS
ID metaerg.pl|02675
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
sp YES;
tm_num 1;
22731 22823 signal_peptide
ID metaerg.pl|02676
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
23408 22731 transmembrane_helix
ID metaerg.pl|02677
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i22764-22832o;
23648 24352 CDS
ID metaerg.pl|02678
allgo_ids GO:0046914;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000001.1_157 5 231 evalue:2.4e-72 qcov:97.00 identity:59.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF04023; PF01325; PF02742; PF13463; PF01047; PF12802;
pfam_desc FeoA domain; Iron dependent repressor, N-terminal DNA binding domain; Iron dependent repressor, metal binding and dimerisation domain; Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id FeoA; Fe_dep_repress; Fe_dep_repr_C; HTH_27; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF04023.14 evalue:1.5e-14 score:53.2 best_domain_score:50.3 name:FeoA; db:Pfam-A.hmm|PF01325.19 evalue:2.5e-23 score:81.3 best_domain_score:79.6 name:Fe_dep_repress; db:Pfam-A.hmm|PF02742.15 evalue:3.9e-29 score:99.8 best_domain_score:98.7 name:Fe_dep_repr_C; db:Pfam-A.hmm|PF13463.6 evalue:1.7e-05 score:24.4 best_domain_score:22.5 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:7.9e-06 score:25.0 best_domain_score:23.7 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:2.2e-07 score:29.9 best_domain_score:27.2 name:MarR_2;
24342 24992 CDS
ID metaerg.pl|02679
allec_ids 2.7.1.48;
allgo_ids GO:0005524; GO:0016301; GO:0005737; GO:0016773; GO:0004849; GO:0044211; GO:0044206;
allko_ids K00876;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Ardenticatenales;f__Ardenticatenaceae;g__Ardenticatena;s__Ardenticatena maritima;
genomedb_acc GCF_001306175.1;
genomedb_target db:genomedb|GCF_001306175.1|WP_054493331.1 10 216 evalue:9.5e-71 qcov:95.80 identity:63.80;
kegg_pathway_id 00983; 00240;
kegg_pathway_name Drug metabolism - other enzymes; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY0-163; P1-PWY;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF13238; PF00485;
pfam_desc AAA domain; Phosphoribulokinase / Uridine kinase family;
pfam_id AAA_18; PRK;
pfam_target db:Pfam-A.hmm|PF13238.6 evalue:1.6e-07 score:31.2 best_domain_score:30.6 name:AAA_18; db:Pfam-A.hmm|PF00485.18 evalue:6.3e-40 score:136.3 best_domain_score:136.0 name:PRK;
sprot_desc Uridine kinase;
sprot_id sp|A9WCC8|URK_CHLAA;
sprot_target db:uniprot_sprot|sp|A9WCC8|URK_CHLAA 11 213 evalue:1.2e-64 qcov:94.00 identity:56.70;
tigrfam_acc TIGR00235;
tigrfam_desc uridine kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name udk;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00235 evalue:3.4e-82 score:274.2 best_domain_score:274.0 name:TIGR00235;
25958 25035 CDS
ID metaerg.pl|02680
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06601.1 1 299 evalue:4.4e-53 qcov:97.40 identity:42.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
sp YES;
25035 25085 lipoprotein_signal_peptide
ID metaerg.pl|02681
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
28327 25958 CDS
ID metaerg.pl|02682
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000116.1_16 7 789 evalue:3.4e-235 qcov:99.20 identity:52.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF13715; PF13620; PF07715;
pfam_desc CarboxypepD_reg-like domain; Carboxypeptidase regulatory-like domain; TonB-dependent Receptor Plug Domain;
pfam_id CarbopepD_reg_2; CarboxypepD_reg; Plug;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:4.3e-08 score:32.3 best_domain_score:31.5 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF13620.6 evalue:3.4e-15 score:55.3 best_domain_score:53.0 name:CarboxypepD_reg; db:Pfam-A.hmm|PF07715.15 evalue:2.9e-11 score:43.1 best_domain_score:42.2 name:Plug;
sp YES;
25958 26032 signal_peptide
ID metaerg.pl|02683
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
28455 29378 CDS
ID metaerg.pl|02684
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Chloroflexia;o__Chloroflexales;f__Chloroflexaceae;g__Chloroploca;s__Chloroploca asiatica;
genomedb_acc GCF_002532075.1;
genomedb_target db:genomedb|GCF_002532075.1|WP_097651328.1 1 298 evalue:1.6e-95 qcov:97.10 identity:60.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00850;
pfam_desc Histone deacetylase domain;
pfam_id Hist_deacetyl;
pfam_target db:Pfam-A.hmm|PF00850.19 evalue:1.2e-44 score:152.3 best_domain_score:151.6 name:Hist_deacetyl;
sprot_desc hypothetical protein;
sprot_id sp|P28606|Y1628_SYNP2;
sprot_target db:uniprot_sprot|sp|P28606|Y1628_SYNP2 3 287 evalue:7.7e-65 qcov:92.80 identity:45.30;
30601 29357 CDS
ID metaerg.pl|02685
allec_ids 4.3.1.19;
allgo_ids GO:0003941; GO:0004794; GO:0030170; GO:0009097; GO:0006565; GO:0006567;
allko_ids K01754; K13034; K01733; K01697; K12339; K01738; K10150;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91188.1 1 401 evalue:1.9e-144 qcov:96.90 identity:65.30;
kegg_pathway_id 00290; 00450; 00920; 00750; 00271; 00272; 00260;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Selenoamino acid metabolism; Sulfur metabolism; Vitamin B6 metabolism; Methionine metabolism; Cysteine metabolism; Glycine, serine and threonine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-5826; PWY-5437; THREOCAT-PWY; ILEUSYN-PWY; PWY-3001; BRANCHED-CHAIN-AA-SYN-PWY;
metacyc_pathway_name hypoglycin biosynthesis;; L-threonine degradation I;; superpathway of L-threonine metabolism;; L-isoleucine biosynthesis I (from threonine);; superpathway of L-isoleucine biosynthesis I;; superpathway of branched chain amino acid biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; THREONINE-DEG;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF01842; PF13291; PF00291;
pfam_desc ACT domain; ACT domain; Pyridoxal-phosphate dependent enzyme;
pfam_id ACT; ACT_4; PALP;
pfam_target db:Pfam-A.hmm|PF01842.25 evalue:2.1e-08 score:33.0 best_domain_score:31.7 name:ACT; db:Pfam-A.hmm|PF13291.6 evalue:1.2e-07 score:31.4 best_domain_score:29.5 name:ACT_4; db:Pfam-A.hmm|PF00291.25 evalue:2.6e-83 score:279.1 best_domain_score:278.4 name:PALP;
sprot_desc L-threonine ammonia-lyase;
sprot_id sp|Q74FW6|TSAL_GEOSL;
sprot_target db:uniprot_sprot|sp|Q74FW6|TSAL_GEOSL 7 400 evalue:1.2e-97 qcov:95.20 identity:49.50;
tigrfam_acc TIGR01127;
tigrfam_desc threonine ammonia-lyase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ilvA_1Cterm;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01127 evalue:2.3e-144 score:480.2 best_domain_score:480.0 name:TIGR01127;
31209 30601 CDS
ID metaerg.pl|02686
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
sp YES;
30601 30687 lipoprotein_signal_peptide
ID metaerg.pl|02687
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
31616 31206 CDS
ID metaerg.pl|02688
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91440.1 1 136 evalue:4.8e-28 qcov:100.00 identity:43.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
32937 31636 CDS
ID metaerg.pl|02689
allec_ids 3.6.4.13;
allgo_ids GO:0003676; GO:0005524; GO:0005829; GO:0004004; GO:0003723; GO:0009408; GO:0042255;
allko_ids K13181; K03732; K05592; K13982; K01529; K12614; K13116; K12858; K13179; K13178; K13025; K12811; K05591; K13131; K03257; K12823; K12812; K03578; K13184; K13177; K05590; K01509; K14442; K13185; K11594; K13182; K11927; K03579; K10896; K12835;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000062.1_9 19 433 evalue:2.9e-159 qcov:95.80 identity:70.50;
kegg_pathway_id 00230; 00790;
kegg_pathway_name Purine metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00270; PF00271; PF04851;
pfam_desc DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit;
pfam_id DEAD; Helicase_C; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:8.8e-49 score:164.9 best_domain_score:164.2 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:3.7e-29 score:100.5 best_domain_score:97.5 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:1.7e-05 score:24.1 best_domain_score:23.4 name:ResIII;
sprot_desc ATP-dependent RNA helicase RhlE;
sprot_id sp|P25888|RHLE_ECOLI;
sprot_target db:uniprot_sprot|sp|P25888|RHLE_ECOLI 20 388 evalue:4.1e-72 qcov:85.20 identity:41.20;
33078 33581 CDS
ID metaerg.pl|02690
allec_ids 3.1.3.48;
allgo_ids GO:0005737; GO:0043005; GO:0003993; GO:0004726; GO:0004725; GO:0017124; GO:0007268;
allko_ids K14394;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25239.1 11 157 evalue:1.0e-43 qcov:88.00 identity:59.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01451;
pfam_desc Low molecular weight phosphotyrosine protein phosphatase;
pfam_id LMWPc;
pfam_target db:Pfam-A.hmm|PF01451.21 evalue:1.3e-42 score:144.8 best_domain_score:144.6 name:LMWPc;
sprot_desc Low molecular weight phosphotyrosine protein phosphatase;
sprot_id sp|P41498|PPAC_RAT;
sprot_target db:uniprot_sprot|sp|P41498|PPAC_RAT 9 161 evalue:2.0e-30 qcov:91.60 identity:42.50;
33584 34549 CDS
ID metaerg.pl|02691
allgo_ids GO:0016301;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90301.1 24 309 evalue:1.1e-51 qcov:89.10 identity:44.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01636; PF03881;
pfam_desc Phosphotransferase enzyme family; Fructosamine kinase;
pfam_id APH; Fructosamin_kin;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:9.1e-11 score:41.4 best_domain_score:40.6 name:APH; db:Pfam-A.hmm|PF03881.14 evalue:6.4e-56 score:188.9 best_domain_score:188.6 name:Fructosamin_kin;
sprot_desc Putative kinase VP1481;
sprot_id sp|Q87PM1|Y1481_VIBPA;
sprot_target db:uniprot_sprot|sp|Q87PM1|Y1481_VIBPA 28 318 evalue:3.8e-30 qcov:90.70 identity:32.70;
35807 34602 CDS
ID metaerg.pl|02692
allec_ids 2.6.1.1;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0004069;
allko_ids K00825; K00812; K10907;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000001.1_167 1 393 evalue:3.5e-135 qcov:98.00 identity:62.80;
kegg_pathway_id 00310; 00710; 00272; 00401; 00400; 00252; 00251; 00330; 00360; 00300; 00350;
kegg_pathway_name Lysine degradation; Carbon fixation in photosynthetic organisms; Cysteine metabolism; Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Alanine and aspartate metabolism; Glutamate metabolism; Arginine and proline metabolism; Phenylalanine metabolism; Lysine biosynthesis; Tyrosine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-6146; ASPASN-PWY; CYSTEINE-DEG-PWY; PWY-3001; P4-PWY; PWY-5345; PWY-5347; ASPARTATE-DEG1-PWY; PWY-5913; GLUTDEG-PWY; PWY-5328; PWY-6318; PWY0-781; ASPARTATESYN-PWY; MALATE-ASPARTATE-SHUTTLE-PWY; THRESYN-PWY;
metacyc_pathway_name Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of L-aspartate and L-asparagine biosynthesis;; L-cysteine degradation I;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-methionine biosynthesis (by sulfhydrylation);; superpathway of L-methionine biosynthesis (transsulfuration);; L-aspartate degradation I;; partial TCA cycle (obligate autotrophs);; L-glutamate degradation II;; superpathway of L-methionine salvage and degradation;; L-phenylalanine degradation IV (mammalian, via side chain);; aspartate superpathway;; L-aspartate biosynthesis;; L-aspartate degradation II;; superpathway of L-threonine biosynthesis;;
metacyc_pathway_type Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Metabolic-Clusters; Super-Pathways;; CYSTEINE-DEG;; ISOLEUCINE-SYN; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; ASPARTATE-DEG;; TCA-VARIANTS;; ASPARTATE-SYN; GLUTAMATE-DEG;; METHIONINE-DEG; Super-Pathways;; PHENYLALANINE-DEG;; Super-Pathways;; ASPARTATE-SYN;; ASPARTATE-DEG;; Super-Pathways; THREONINE-BIOSYNTHESIS;;
pfam_acc PF00155; PF01041;
pfam_desc Aminotransferase class I and II; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:5.6e-61 score:205.9 best_domain_score:205.6 name:Aminotran_1_2; db:Pfam-A.hmm|PF01041.17 evalue:0.00018 score:20.1 best_domain_score:19.0 name:DegT_DnrJ_EryC1;
sprot_desc Aspartate aminotransferase;
sprot_id sp|P53001|AAT1_BACSU;
sprot_target db:uniprot_sprot|sp|P53001|AAT1_BACSU 1 394 evalue:5.7e-76 qcov:98.30 identity:39.50;
35963 36604 CDS
ID metaerg.pl|02693
allgo_ids GO:0015035;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000016.1_33 27 197 evalue:1.7e-27 qcov:80.30 identity:39.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01323;
pfam_desc DSBA-like thioredoxin domain;
pfam_id DSBA;
pfam_target db:Pfam-A.hmm|PF01323.20 evalue:6.8e-16 score:57.8 best_domain_score:57.7 name:DSBA;
36624 36926 CDS
ID metaerg.pl|02694
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000001.1_169 1 100 evalue:6.8e-32 qcov:100.00 identity:69.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
37054 38688 CDS
ID metaerg.pl|02695
allko_ids K05592;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000317.1_16 1 529 evalue:2.4e-102 qcov:97.20 identity:44.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF03880;
pfam_desc DbpA RNA binding domain;
pfam_id DbpA;
pfam_target db:Pfam-A.hmm|PF03880.15 evalue:5.3e-25 score:86.4 best_domain_score:85.6 name:DbpA;
39114 38830 CDS
ID metaerg.pl|02696
allgo_ids GO:0003677; GO:0030261;
allko_ids K03530;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000028.1_63 1 94 evalue:5.4e-31 qcov:100.00 identity:74.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00216;
pfam_desc Bacterial DNA-binding protein;
pfam_id Bac_DNA_binding;
pfam_target db:Pfam-A.hmm|PF00216.21 evalue:3.3e-33 score:113.0 best_domain_score:112.8 name:Bac_DNA_binding;
sprot_desc DNA-binding protein HU-alpha;
sprot_id sp|I1WEI8|DBHA_BURP2;
sprot_target db:uniprot_sprot|sp|I1WEI8|DBHA_BURP2 1 93 evalue:2.1e-21 qcov:98.90 identity:59.10;
39610 39828 CDS
ID metaerg.pl|02697
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
39924 40409 CDS
ID metaerg.pl|02698
allec_ids 6.3.2.-;
allgo_ids GO:0016881; GO:0005524; GO:0046872; GO:0006464; GO:0006412;
allko_ids K05844;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Spirulinaceae;g__Spirulina;s__Spirulina subsalsa;
genomedb_acc GCF_000314005.1;
genomedb_target db:genomedb|GCF_000314005.1|WP_052646651.1 8 157 evalue:2.9e-40 qcov:93.20 identity:54.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-6455;
metacyc_pathway_name vancomycin resistance II;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Vancomycin-Resistnace;;
pfam_acc PF05618;
pfam_desc Putative ATP-dependant zinc protease;
pfam_id Zn_protease;
pfam_target db:Pfam-A.hmm|PF05618.11 evalue:5e-34 score:116.4 best_domain_score:116.2 name:Zn_protease;
sprot_desc Probable alpha-L-glutamate ligase;
sprot_id sp|A8H4D4|RIMK_SHEPA;
sprot_target db:uniprot_sprot|sp|A8H4D4|RIMK_SHEPA 13 152 evalue:1.0e-28 qcov:87.00 identity:45.00;
40406 41335 CDS
ID metaerg.pl|02699
allec_ids 6.3.2.-;
allgo_ids GO:0005524; GO:0046872; GO:0016881; GO:0006464; GO:0006412;
allko_ids K05844;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Coleofasciculaceae;g__Coleofasciculus;s__Coleofasciculus chthonoplastes;
genomedb_acc GCF_000155555.1;
genomedb_target db:genomedb|GCF_000155555.1|WP_044206699.1 1 308 evalue:1.2e-106 qcov:99.70 identity:67.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-6455;
metacyc_pathway_name vancomycin resistance II;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Vancomycin-Resistnace;;
pfam_acc PF02655; PF07478; PF02955; PF08443; PF18030;
pfam_desc ATP-grasp domain; D-ala D-ala ligase C-terminus; Prokaryotic glutathione synthetase, ATP-grasp domain; RimK-like ATP-grasp domain; RimK PreATP-grasp domain;
pfam_id ATP-grasp_3; Dala_Dala_lig_C; GSH-S_ATP; RimK; Rimk_N;
pfam_target db:Pfam-A.hmm|PF02655.14 evalue:1.9e-10 score:40.2 best_domain_score:39.7 name:ATP-grasp_3; db:Pfam-A.hmm|PF07478.13 evalue:7.3e-05 score:21.6 best_domain_score:16.9 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF02955.16 evalue:4e-20 score:71.2 best_domain_score:70.5 name:GSH-S_ATP; db:Pfam-A.hmm|PF08443.11 evalue:3.7e-64 score:215.0 best_domain_score:214.6 name:RimK; db:Pfam-A.hmm|PF18030.1 evalue:2e-39 score:133.1 best_domain_score:131.9 name:Rimk_N;
sprot_desc Probable alpha-L-glutamate ligase;
sprot_id sp|B5FBB1|RIMK_ALIFM;
sprot_target db:uniprot_sprot|sp|B5FBB1|RIMK_ALIFM 1 306 evalue:1.8e-101 qcov:99.00 identity:64.10;
tigrfam_acc TIGR00768;
tigrfam_desc alpha-L-glutamate ligase, RimK family;
tigrfam_name rimK_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR00768 evalue:2.3e-80 score:269.1 best_domain_score:268.9 name:TIGR00768;
41332 42309 CDS
ID metaerg.pl|02700
allgo_ids GO:0016788;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Dermatophilaceae;g__Knoellia;s__Knoellia flava;
genomedb_acc GCF_000768675.1;
genomedb_target db:genomedb|GCF_000768675.1|WP_052117204.1 14 324 evalue:1.8e-97 qcov:95.70 identity:60.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF04952;
pfam_desc Succinylglutamate desuccinylase / Aspartoacylase family;
pfam_id AstE_AspA;
pfam_target db:Pfam-A.hmm|PF04952.14 evalue:3.1e-55 score:186.5 best_domain_score:186.3 name:AstE_AspA;
43203 42319 CDS
ID metaerg.pl|02701
allec_ids 3.6.1.27;
allgo_ids GO:0016020; GO:0016311; GO:0050380; GO:0016021; GO:0005886; GO:0071555; GO:0009252; GO:0008360; GO:0046677;
allko_ids K06153;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Spirulinaceae;g__Spirulina;s__Spirulina subsalsa;
genomedb_acc GCF_000314005.1;
genomedb_target db:genomedb|GCF_000314005.1|WP_017303784.1 1 287 evalue:5.6e-90 qcov:97.60 identity:58.40;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF02673;
pfam_desc Bacitracin resistance protein BacA;
pfam_id BacA;
pfam_target db:Pfam-A.hmm|PF02673.18 evalue:2.5e-64 score:216.7 best_domain_score:216.5 name:BacA;
sprot_desc Undecaprenyl-diphosphatase;
sprot_id sp|A1WUY5|UPPP_HALHL;
sprot_target db:uniprot_sprot|sp|A1WUY5|UPPP_HALHL 1 283 evalue:2.5e-81 qcov:96.30 identity:58.10;
tm_num 7;
43203 42319 transmembrane_helix
ID metaerg.pl|02702
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i42337-42405o42463-42522i42625-42693o42703-42762i42931-42990o43033-43101i43120-43188o;
44846 43200 CDS
ID metaerg.pl|02703
allec_ids 6.3.5.7;
allgo_ids GO:0030956; GO:0004040; GO:0005524; GO:0050567; GO:0006412;
allko_ids K02433;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Jiangella;s__Jiangella alba;
genomedb_acc GCF_900106035.1;
genomedb_target db:genomedb|GCF_900106035.1|WP_069113341.1 5 548 evalue:1.8e-158 qcov:99.30 identity:57.60;
kegg_pathway_id 00252; 00251;
kegg_pathway_name Alanine and aspartate metabolism; Glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-5921;
metacyc_pathway_name glutaminyl-tRNAgln biosynthesis via transamidation;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging;;
pfam_acc PF01425;
pfam_desc Amidase;
pfam_id Amidase;
pfam_target db:Pfam-A.hmm|PF01425.21 evalue:1.9e-72 score:243.9 best_domain_score:239.9 name:Amidase;
sp YES;
sprot_desc Glutamyl-tRNA(Gln) amidotransferase subunit A;
sprot_id sp|A9WCD8|GATA_CHLAA;
sprot_target db:uniprot_sprot|sp|A9WCD8|GATA_CHLAA 74 516 evalue:3.9e-43 qcov:80.80 identity:32.40;
43200 43307 signal_peptide
ID metaerg.pl|02704
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
45135 44836 CDS
ID metaerg.pl|02705
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000128.1_35 18 87 evalue:1.2e-12 qcov:70.70 identity:54.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
45297 46766 CDS
ID metaerg.pl|02706
allgo_ids GO:0006508; GO:0008236;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91604.1 26 481 evalue:1.5e-92 qcov:93.30 identity:44.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF03572; PF14684;
pfam_desc Peptidase family S41; Tricorn protease C1 domain;
pfam_id Peptidase_S41; Tricorn_C1;
pfam_target db:Pfam-A.hmm|PF03572.18 evalue:4.1e-23 score:81.0 best_domain_score:80.5 name:Peptidase_S41; db:Pfam-A.hmm|PF14684.6 evalue:5.9e-11 score:41.5 best_domain_score:40.9 name:Tricorn_C1;
sp YES;
45297 45449 signal_peptide
ID metaerg.pl|02707
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
46808 47611 CDS
ID metaerg.pl|02708
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724883.1 30 260 evalue:6.9e-47 qcov:86.50 identity:43.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
sp YES;
46808 46918 signal_peptide
ID metaerg.pl|02709
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
47769 50762 CDS
ID metaerg.pl|02710
allgo_ids GO:0004181; GO:0006508; GO:0008270;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90919.1 13 989 evalue:0.0e+00 qcov:98.00 identity:61.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00246;
pfam_desc Zinc carboxypeptidase;
pfam_id Peptidase_M14;
pfam_target db:Pfam-A.hmm|PF00246.24 evalue:2.6e-18 score:66.1 best_domain_score:65.4 name:Peptidase_M14;
sp YES;
47769 47906 signal_peptide
ID metaerg.pl|02711
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
50767 52200 CDS
ID metaerg.pl|02712
allgo_ids GO:0016746;
allko_ids K13512; K13510;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-544;s__SZUA-544 sp003251175;
genomedb_acc GCA_003251175.1;
genomedb_target db:genomedb|GCA_003251175.1|QKHC01000093.1_18 46 472 evalue:3.8e-88 qcov:89.50 identity:47.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01553;
pfam_desc Acyltransferase;
pfam_id Acyltransferase;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:1.6e-17 score:62.6 best_domain_score:61.8 name:Acyltransferase;
tm_num 3;
50767 52200 transmembrane_helix
ID metaerg.pl|02713
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o51799-51867i51925-51993o52003-52059i;
52247 53851 CDS
ID metaerg.pl|02714
allec_ids 3.4.17.-;
allgo_ids GO:0004181; GO:0006508; GO:0008270; GO:0005576; GO:0009405;
genomedb_OC d__Bacteria;p__Bacteroidota;c__UBA10030;o__UBA10030;f__UBA6906;g__Fen-1260;s__Fen-1260 sp003162635;
genomedb_acc GCA_003162635.1;
genomedb_target db:genomedb|GCA_003162635.1|PMNE01000032.1_76 50 530 evalue:5.2e-78 qcov:90.10 identity:36.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00246;
pfam_desc Zinc carboxypeptidase;
pfam_id Peptidase_M14;
pfam_target db:Pfam-A.hmm|PF00246.24 evalue:2.1e-21 score:76.2 best_domain_score:72.0 name:Peptidase_M14;
sp YES;
sprot_desc Carboxypeptidase 2;
sprot_id sp|B6V866|MCPB_TRITO;
sprot_target db:uniprot_sprot|sp|B6V866|MCPB_TRITO 95 530 evalue:1.5e-31 qcov:81.60 identity:26.80;
52247 52351 lipoprotein_signal_peptide
ID metaerg.pl|02715
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
56519 53940 CDS
ID metaerg.pl|02716
allec_ids 3.4.21.-;
allgo_ids GO:0006508; GO:0008236; GO:0009570; GO:0004252;
allko_ids K01303; K01730;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Tc-Br11-B2g6-7;s__Tc-Br11-B2g6-7 sp001564055;
genomedb_acc GCA_001564055.1;
genomedb_target db:genomedb|GCA_001564055.1|LKNB01000003.1_36 17 835 evalue:1.4e-250 qcov:95.30 identity:52.20;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF10647; PF00326;
pfam_desc Lipoprotein LpqB beta-propeller domain; Prolyl oligopeptidase family;
pfam_id Gmad1; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF10647.9 evalue:0.00015 score:20.9 best_domain_score:18.9 name:Gmad1; db:Pfam-A.hmm|PF00326.21 evalue:9.2e-21 score:73.5 best_domain_score:72.9 name:Peptidase_S9;
sp YES;
sprot_desc Probable glutamyl endopeptidase, chloroplastic;
sprot_id sp|Q10MJ1|CGEP_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q10MJ1|CGEP_ORYSJ 40 831 evalue:5.1e-82 qcov:92.20 identity:28.80;
53940 54032 signal_peptide
ID metaerg.pl|02717
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
58375 56612 CDS
ID metaerg.pl|02718
allec_ids 3.5.1.81;
allgo_ids GO:0016787; GO:0005737; GO:0047420;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04866.1 14 580 evalue:1.2e-173 qcov:96.60 identity:53.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:7.8e-10 score:37.8 best_domain_score:24.0 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:9.9e-25 score:87.1 best_domain_score:48.5 name:Amidohydro_3;
sp YES;
sprot_desc D-aminoacylase;
sprot_id sp|P72349|NDAD_ALCXX;
sprot_target db:uniprot_sprot|sp|P72349|NDAD_ALCXX 50 575 evalue:6.9e-62 qcov:89.60 identity:32.20;
tm_num 1;
56612 56719 signal_peptide
ID metaerg.pl|02719
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
58375 56612 transmembrane_helix
ID metaerg.pl|02720
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i56630-56698o;
59919 58372 CDS
ID metaerg.pl|02721
allgo_ids GO:0015558; GO:1902604; GO:0016021; GO:0005886; GO:0015291; GO:0006865; GO:0015814;
allko_ids K12942;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Ignavibacteria;o__Ignavibacteriales;f__Melioribacteraceae;g__GCA-2698995;s__GCA-2698995 sp002698995;
genomedb_acc GCA_002698995.1;
genomedb_target db:genomedb|GCA_002698995.1|MAT59696.1 24 515 evalue:4.5e-188 qcov:95.50 identity:69.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF03806; PF02667;
pfam_desc AbgT putative transporter family; Short chain fatty acid transporter;
pfam_id ABG_transport; SCFA_trans;
pfam_target db:Pfam-A.hmm|PF03806.13 evalue:9.4e-196 score:650.1 best_domain_score:649.8 name:ABG_transport; db:Pfam-A.hmm|PF02667.14 evalue:1.2e-07 score:30.3 best_domain_score:30.3 name:SCFA_trans;
sprot_desc p-aminobenzoyl-glutamate transport protein;
sprot_id sp|P46133|ABGT_ECOLI;
sprot_target db:uniprot_sprot|sp|P46133|ABGT_ECOLI 26 507 evalue:5.8e-89 qcov:93.60 identity:38.10;
tm_num 13;
59919 58372 transmembrane_helix
ID metaerg.pl|02722
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i58483-58542o58657-58725i58744-58812o58822-58875i58888-58956o59020-59088i59176-59244o59287-59355i59416-59484o59527-59595i59614-59667o59695-59763i59812-59880o;
60124 61398 CDS
ID metaerg.pl|02723
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
61452 62270 CDS
ID metaerg.pl|02724
allgo_ids GO:0003700; GO:0006355; GO:0043565;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF12833; PF13384;
pfam_desc Helix-turn-helix domain; Homeodomain-like domain;
pfam_id HTH_18; HTH_23;
pfam_target db:Pfam-A.hmm|PF12833.7 evalue:3.2e-14 score:52.2 best_domain_score:48.5 name:HTH_18; db:Pfam-A.hmm|PF13384.6 evalue:4.6e-06 score:25.5 best_domain_score:18.2 name:HTH_23;
62274 63098 CDS
ID metaerg.pl|02725
allec_ids 2.5.1.145; 2.4.99.-;
allgo_ids GO:0016020; GO:0016757; GO:0042158; GO:0005887; GO:0008961;
allko_ids K13292;
genomedb_OC d__Archaea;p__Nanoarchaeota;c__Nanoarchaeia;o__Woesearchaeales;f__GW2011-AR4;g__GW2011-AR11;s__GW2011-AR11 sp12027u;
genomedb_acc UBA12027;
genomedb_target db:genomedb|UBA12027|contig_9451_9 4 264 evalue:5.6e-44 qcov:95.30 identity:40.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-6467;
metacyc_pathway_name Kdo transfer to lipid IVA III (Chlamydia);;
metacyc_pathway_type KDO-Lipid-IV-Transfer; Super-Pathways;;
pfam_acc PF01790;
pfam_desc Prolipoprotein diacylglyceryl transferase;
pfam_id LGT;
pfam_target db:Pfam-A.hmm|PF01790.18 evalue:3.8e-54 score:182.7 best_domain_score:182.5 name:LGT;
sprot_desc Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase;
sprot_id sp|B3H2W4|LGT_ACTP7;
sprot_target db:uniprot_sprot|sp|B3H2W4|LGT_ACTP7 1 264 evalue:5.3e-33 qcov:96.40 identity:33.30;
tigrfam_acc TIGR00544;
tigrfam_desc prolipoprotein diacylglyceryl transferase;
tigrfam_mainrole Protein fate;
tigrfam_name lgt;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00544 evalue:1.2e-50 score:171.7 best_domain_score:171.4 name:TIGR00544;
tm_num 5;
62274 63098 transmembrane_helix
ID metaerg.pl|02726
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o62331-62390i62448-62507o62550-62618i62898-62957o62985-63053i;
63135 63839 CDS
ID metaerg.pl|02727
allec_ids 3.5.1.19;
allgo_ids GO:0003824; GO:0046872; GO:0008936; GO:0019365;
allko_ids K08281;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__21-64-14;f__21-64-14;g__BMS3Abin12;s__BMS3Abin12 sp002897735;
genomedb_acc GCA_002897735.1;
genomedb_target db:genomedb|GCA_002897735.1|GBE50707.1 27 227 evalue:2.4e-75 qcov:85.90 identity:63.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-3502; PWY-5381;
metacyc_pathway_name superpathway of NAD biosynthesis in eukaryotes;; pyridine nucleotide cycling (plants);;
metacyc_pathway_type NAD-SYN; Super-Pathways;; NAD-Metabolism;;
pfam_acc PF00857;
pfam_desc Isochorismatase family;
pfam_id Isochorismatase;
pfam_target db:Pfam-A.hmm|PF00857.20 evalue:1.5e-22 score:79.8 best_domain_score:77.5 name:Isochorismatase;
sprot_desc Nicotinamidase;
sprot_id sp|P21369|PNCA_ECOLI;
sprot_target db:uniprot_sprot|sp|P21369|PNCA_ECOLI 28 231 evalue:7.7e-41 qcov:87.20 identity:44.20;
63917 65170 CDS
ID metaerg.pl|02728
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0022857;
allko_ids K03294;
genomedb_OC d__Bacteria;p__Myxococcota;c__Polyangia;o__Nannocystales;f__Nannocystaceae;g__Enhygromyxa;s__Enhygromyxa salina_C;
genomedb_acc GCA_000737335.3;
genomedb_target db:genomedb|GCA_000737335.3|KIG18097.1 1 412 evalue:1.6e-114 qcov:98.80 identity:59.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00324; PF13520;
pfam_desc Amino acid permease; Amino acid permease;
pfam_id AA_permease; AA_permease_2;
pfam_target db:Pfam-A.hmm|PF00324.21 evalue:2e-37 score:128.2 best_domain_score:127.9 name:AA_permease; db:Pfam-A.hmm|PF13520.6 evalue:4.3e-36 score:123.9 best_domain_score:123.6 name:AA_permease_2;
sprot_desc Uncharacterized transporter MT2055;
sprot_id sp|P9WQM2|Y1999_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WQM2|Y1999_MYCTO 1 411 evalue:2.7e-52 qcov:98.60 identity:38.80;
tm_num 9;
63917 65170 transmembrane_helix
ID metaerg.pl|02729
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o63959-64027i64145-64213o64241-64300i64319-64378o64436-64504i64565-64633o64718-64786i64898-64966o65063-65131i;
65278 66957 CDS
ID metaerg.pl|02730
allec_ids 3.6.3.41;
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0019843; GO:0000049; GO:0045900; GO:0006412;
allko_ids K11072; K02045; K01996; K02071; K06861; K10441; K02074; K05776; K02017; K02032; K05847; K02010; K02056; K09817; K02003; K01997; K02052; K02006; K02000; K01990; K02023; K02013; K09687; K05816; K06857; K02193; K02049; K02065; K01995; K10111; K01998; K06020;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91989.1 1 559 evalue:3.8e-249 qcov:100.00 identity:74.80;
kegg_pathway_id 02010; 00910;
kegg_pathway_name ABC transporters - General; Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF13304; PF13476; PF00005; PF12848; PF02492; PF01926;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; ABC transporter; ABC transporter; CobW/HypB/UreG, nucleotide-binding domain; 50S ribosome-binding GTPase;
pfam_id AAA_21; AAA_23; ABC_tran; ABC_tran_Xtn; cobW; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.6e-17 score:63.5 best_domain_score:22.0 name:AAA_21; db:Pfam-A.hmm|PF13476.6 evalue:1.3e-08 score:34.8 best_domain_score:18.5 name:AAA_23; db:Pfam-A.hmm|PF00005.27 evalue:3.1e-52 score:176.0 best_domain_score:95.4 name:ABC_tran; db:Pfam-A.hmm|PF12848.7 evalue:2e-13 score:49.4 best_domain_score:45.8 name:ABC_tran_Xtn; db:Pfam-A.hmm|PF02492.19 evalue:0.00013 score:20.9 best_domain_score:10.6 name:cobW; db:Pfam-A.hmm|PF01926.23 evalue:2.4e-05 score:23.6 best_domain_score:11.1 name:MMR_HSR1;
sprot_desc Energy-dependent translational throttle protein EttA;
sprot_id sp|P0A9W4|ETTA_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9W4|ETTA_ECO57 5 559 evalue:5.7e-191 qcov:99.30 identity:60.00;
tigrfam_acc TIGR01189; TIGR03719;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA; ATP-binding cassette protein, ChvD family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA; ABC_ABC_ChvD;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:1.7e-45 score:154.3 best_domain_score:75.3 name:TIGR01189; db:TIGRFAMs.hmm|TIGR03719 evalue:8.3e-285 score:944.7 best_domain_score:944.6 name:TIGR03719;
66997 67440 CDS
ID metaerg.pl|02731
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
tm_num 1;
66997 67440 transmembrane_helix
ID metaerg.pl|02732
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i67030-67089o;
68665 67490 CDS
ID metaerg.pl|02733
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__UBA7656;f__UBA7656;g__UBA7656;s__UBA7656 sp002483445;
genomedb_acc GCA_002483445.1;
genomedb_target db:genomedb|GCA_002483445.1|DLHY01000049.1_14 5 390 evalue:2.8e-113 qcov:98.70 identity:50.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00144;
pfam_desc Beta-lactamase;
pfam_id Beta-lactamase;
pfam_target db:Pfam-A.hmm|PF00144.24 evalue:1.5e-62 score:210.9 best_domain_score:210.6 name:Beta-lactamase;
sp YES;
67490 67570 signal_peptide
ID metaerg.pl|02734
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
69516 68713 CDS
ID metaerg.pl|02735
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__13-1-40CM-70-15;s__13-1-40CM-70-15 sp003223415;
genomedb_acc GCA_003223415.1;
genomedb_target db:genomedb|GCA_003223415.1|PYP74350.1 11 260 evalue:5.2e-26 qcov:93.60 identity:37.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
tm_num 2;
69516 68713 transmembrane_helix
ID metaerg.pl|02736
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i69262-69330o69340-69408i;
69605 69922 CDS
ID metaerg.pl|02737
allgo_ids GO:0003677; GO:0006355; GO:0046872; GO:0005737; GO:0032993; GO:0001217; GO:0000976; GO:0045892; GO:0046688;
allko_ids K21600;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__12-FULL-67-14b;s__12-FULL-67-14b sp002737365;
genomedb_acc GCA_002737365.1;
genomedb_target db:genomedb|GCA_002737365.1|PHY09741.1 11 105 evalue:7.0e-27 qcov:90.50 identity:63.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF02583;
pfam_desc Metal-sensitive transcriptional repressor;
pfam_id Trns_repr_metal;
pfam_target db:Pfam-A.hmm|PF02583.17 evalue:9.1e-27 score:92.5 best_domain_score:92.2 name:Trns_repr_metal;
sprot_desc Copper-sensing transcriptional repressor RicR;
sprot_id sp|O07434|RICR_MYCTU;
sprot_target db:uniprot_sprot|sp|O07434|RICR_MYCTU 27 105 evalue:2.1e-14 qcov:75.20 identity:48.10;
71028 69931 CDS
ID metaerg.pl|02738
allec_ids 3.4.19.5;
allgo_ids GO:0016787; GO:0004067; GO:0008798; GO:0016540;
allko_ids K13051;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91003.1 35 360 evalue:9.6e-100 qcov:89.30 identity:59.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01112;
pfam_desc Asparaginase;
pfam_id Asparaginase_2;
pfam_target db:Pfam-A.hmm|PF01112.18 evalue:5e-115 score:383.0 best_domain_score:382.8 name:Asparaginase_2;
sp YES;
sprot_desc Isoaspartyl peptidase;
sprot_id sp|P37595|IAAA_ECOLI;
sprot_target db:uniprot_sprot|sp|P37595|IAAA_ECOLI 56 363 evalue:3.0e-76 qcov:84.40 identity:52.20;
69931 70029 lipoprotein_signal_peptide
ID metaerg.pl|02739
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
71316 72017 CDS
ID metaerg.pl|02740
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Aliifodinibius;s__Aliifodinibius sp002287075;
genomedb_acc GCF_002287075.1;
genomedb_target db:genomedb|GCF_002287075.1|WP_095607626.1 1 233 evalue:3.6e-68 qcov:100.00 identity:57.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF02585;
pfam_desc GlcNAc-PI de-N-acetylase;
pfam_id PIG-L;
pfam_target db:Pfam-A.hmm|PF02585.17 evalue:4.8e-23 score:81.5 best_domain_score:81.0 name:PIG-L;
72723 72019 CDS
ID metaerg.pl|02741
allec_ids 4.2.99.20;
allgo_ids GO:0070205; GO:0009234;
allko_ids K08680;
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Thermoactinomycetales;f__Thermoactinomycetaceae;g__Marininema;s__Marininema halotolerans;
genomedb_acc GCF_900116235.1;
genomedb_target db:genomedb|GCF_900116235.1|WP_091833519.1 13 232 evalue:3.2e-48 qcov:94.00 identity:49.50;
kegg_pathway_id 00130;
kegg_pathway_name Ubiquinone biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-5837; PWY-5897; ALL-CHORISMATE-PWY; PWY-5840; PWY-5850; PWY-5863; PWY-5899; PWY-5838; PWY-5861; PWY-5898; PWY-5860; PWY-5791; PWY-5896; PWY-5845; PWY-5862;
metacyc_pathway_name 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of menaquinol-11 biosynthesis;; superpathway of chorismate metabolism;; superpathway of menaquinol-7 biosynthesis;; superpathway of menaquinol-6 biosynthesis I;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-12 biosynthesis;; superpathway of demethylmenaquinol-6 biosynthesis I;; ; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;;
metacyc_pathway_type DHNA-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; ; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF00561; PF08386; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; TAP-like protein; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_4; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:5.5e-12 score:45.1 best_domain_score:37.4 name:Abhydrolase_1; db:Pfam-A.hmm|PF08386.10 evalue:8.6e-05 score:21.8 best_domain_score:20.3 name:Abhydrolase_4; db:Pfam-A.hmm|PF12697.7 evalue:8.3e-17 score:61.7 best_domain_score:61.5 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:7.5e-08 score:31.2 best_domain_score:29.8 name:Hydrolase_4;
sprot_desc Putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase;
sprot_id sp|P23974|MENH_BACSU;
sprot_target db:uniprot_sprot|sp|P23974|MENH_BACSU 10 234 evalue:2.1e-38 qcov:96.20 identity:43.10;
tigrfam_acc TIGR03695;
tigrfam_desc 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name menH_SHCHC;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR03695 evalue:2e-67 score:226.5 best_domain_score:226.3 name:TIGR03695;
74413 72842 CDS
ID metaerg.pl|02742
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Luteimonas;s__Luteimonas sp001717465;
genomedb_acc GCF_001717465.1;
genomedb_target db:genomedb|GCF_001717465.1|WP_095207776.1 9 520 evalue:5.9e-167 qcov:97.90 identity:57.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00144; PF11954;
pfam_desc Beta-lactamase; Domain of unknown function (DUF3471);
pfam_id Beta-lactamase; DUF3471;
pfam_target db:Pfam-A.hmm|PF00144.24 evalue:1e-68 score:231.2 best_domain_score:230.7 name:Beta-lactamase; db:Pfam-A.hmm|PF11954.8 evalue:5.3e-14 score:51.8 best_domain_score:50.9 name:DUF3471;
sp YES;
72842 72925 signal_peptide
ID metaerg.pl|02743
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
74933 74550 CDS
ID metaerg.pl|02744
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
sp YES;
74550 74609 lipoprotein_signal_peptide
ID metaerg.pl|02745
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
75510 75073 CDS
ID metaerg.pl|02746
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
tm_num 2;
75510 75073 transmembrane_helix
ID metaerg.pl|02747
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i75334-75393o75421-75489i;
75545 76801 CDS
ID metaerg.pl|02748
allec_ids 2.1.1.173; 2.1.1.264;
allgo_ids GO:0005737; GO:0052915; GO:0003723; GO:0070043;
allko_ids K12297;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__FEN-1250;s__FEN-1250 sp003142495;
genomedb_acc GCA_003142495.1;
genomedb_target db:genomedb|GCA_003142495.1|PLMM01000265.1_5 23 401 evalue:1.1e-67 qcov:90.70 identity:42.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01170;
pfam_desc Putative RNA methylase family UPF0020;
pfam_id UPF0020;
pfam_target db:Pfam-A.hmm|PF01170.18 evalue:4.7e-36 score:123.6 best_domain_score:122.8 name:UPF0020;
sprot_desc Ribosomal RNA large subunit methyltransferase K/L;
sprot_id sp|Q3A2U5|RLMKL_PELCD;
sprot_target db:uniprot_sprot|sp|Q3A2U5|RLMKL_PELCD 22 404 evalue:4.6e-44 qcov:91.60 identity:35.10;
78020 76746 CDS
ID metaerg.pl|02749
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002348265;
genomedb_acc GCA_002348265.1;
genomedb_target db:genomedb|GCA_002348265.1|DEAT01000036.1_12 10 418 evalue:1.1e-123 qcov:96.50 identity:57.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01266; PF00890; PF03486;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; HI0933-like protein;
pfam_id DAO; FAD_binding_2; HI0933_like;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:3.5e-09 score:35.9 best_domain_score:21.8 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:9e-11 score:40.7 best_domain_score:32.5 name:FAD_binding_2; db:Pfam-A.hmm|PF03486.14 evalue:5.3e-96 score:321.0 best_domain_score:320.9 name:HI0933_like;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|Q795R8|YTFP_BACSU;
sprot_target db:uniprot_sprot|sp|Q795R8|YTFP_BACSU 6 419 evalue:3.6e-44 qcov:97.60 identity:32.00;
tigrfam_acc TIGR00275;
tigrfam_desc flavoprotein, HI0933 family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00275;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00275 evalue:5.3e-97 score:324.3 best_domain_score:324.1 name:TIGR00275;
76746 76826 signal_peptide
ID metaerg.pl|02750
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
79710 78007 CDS
ID metaerg.pl|02751
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya tangerina;
genomedb_acc GCA_003074135.1;
genomedb_target db:genomedb|GCA_003074135.1|PPDK01000002.1_15 68 544 evalue:7.8e-56 qcov:84.10 identity:34.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF03703;
pfam_desc Bacterial PH domain;
pfam_id bPH_2;
pfam_target db:Pfam-A.hmm|PF03703.14 evalue:8.2e-39 score:130.9 best_domain_score:51.1 name:bPH_2;
tm_num 5;
79710 78007 transmembrane_helix
ID metaerg.pl|02752
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o78199-78267i78286-78345o78871-78939i79261-79314o79357-79425i;
80227 79697 CDS
ID metaerg.pl|02753
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya tangerina;
genomedb_acc GCA_003074135.1;
genomedb_target db:genomedb|GCA_003074135.1|PPDK01000002.1_16 15 166 evalue:5.4e-24 qcov:86.40 identity:39.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF03703;
pfam_desc Bacterial PH domain;
pfam_id bPH_2;
pfam_target db:Pfam-A.hmm|PF03703.14 evalue:5.9e-16 score:57.7 best_domain_score:57.2 name:bPH_2;
tm_num 2;
80227 79697 transmembrane_helix
ID metaerg.pl|02754
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o79787-79855i79874-79942o;
80499 80942 CDS
ID metaerg.pl|02755
allgo_ids GO:0006413; GO:0005737; GO:0003743;
allko_ids K02520;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Allofustis;s__Allofustis seminis;
genomedb_acc GCF_000374325.1;
genomedb_target db:genomedb|GCF_000374325.1|WP_018659441.1 1 143 evalue:4.5e-32 qcov:97.30 identity:53.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00707; PF05198;
pfam_desc Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain;
pfam_id IF3_C; IF3_N;
pfam_target db:Pfam-A.hmm|PF00707.22 evalue:5.7e-29 score:99.2 best_domain_score:98.6 name:IF3_C; db:Pfam-A.hmm|PF05198.16 evalue:2.9e-20 score:71.5 best_domain_score:70.6 name:IF3_N;
sprot_desc Translation initiation factor IF-3;
sprot_id sp|Q5P7X6|IF3_AROAE;
sprot_target db:uniprot_sprot|sp|Q5P7X6|IF3_AROAE 1 143 evalue:2.8e-28 qcov:97.30 identity:44.80;
tigrfam_acc TIGR00168;
tigrfam_desc translation initiation factor IF-3;
tigrfam_mainrole Protein synthesis;
tigrfam_name infC;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00168 evalue:7.1e-50 score:168.0 best_domain_score:167.9 name:TIGR00168;
81077 81865 CDS
ID metaerg.pl|02756
allec_ids 2.1.1.-;
allgo_ids GO:0008168; GO:0005737; GO:0008276;
allko_ids K02687;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06652.1 10 251 evalue:5.2e-31 qcov:92.40 identity:40.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-1061; PWY-5876; PWY-5975; PWY-5864; PWY-5305; PWYG-321; PWY-6113; PWY-5729; PWY-1422; PWY-5467; PWY-6477; PWY-6575; PWY-6442; CODH-PWY; PWY-5041; PWY-4021; PWY-3542; ALL-CHORISMATE-PWY; PWY-6153; CO2FORM-PWY; PWY-5116; PWY-1581; METHIONINE-DEG1-PWY; PWY-5328; PWY-5773; PWY-6519; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6146; PWY-6395; PWY-6427; PWY-5479; PWY-5987; PWY-6292; PWY-5855; PWY-5209; PWY-6151; PWY-5857; PWY-6303; METH-ACETATE-PWY; PWY-5856; PWY-6142; PWY-6154; UBISYN-PWY; PWY-6424;
metacyc_pathway_name homogalacturonan biosynthesis;; magnoflorine biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; vitamin E biosynthesis (tocopherols);; gramine biosynthesis;; gibberellin inactivation II (methylation);; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; choline biosynthesis II;; superpathway of chorismate metabolism;; autoinducer AI-2 biosynthesis I;; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; xanthohumol biosynthesis;; biotin biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of seleno-compound metabolism;; rot-2'-enonate biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; methanogenesis from acetate;; ubiquinol-9 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ;
metacyc_pathway_type PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Autotrophic-CO2-Fixation;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; Choline-Biosynthesis;; Super-Pathways;; Autoinducer-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Rotenoids-Biosynthesis;; LIGNAN-SYN;; QUINONE-SYN;; CYSTEINE-SYN; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Autoinducer-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; ;
pfam_acc PF02475; PF05175; PF06325;
pfam_desc Met-10+ like-protein; Methyltransferase small domain; Ribosomal protein L11 methyltransferase (PrmA);
pfam_id Met_10; MTS; PrmA;
pfam_target db:Pfam-A.hmm|PF02475.16 evalue:8e-05 score:21.7 best_domain_score:21.2 name:Met_10; db:Pfam-A.hmm|PF05175.14 evalue:1.3e-05 score:24.1 best_domain_score:23.5 name:MTS; db:Pfam-A.hmm|PF06325.13 evalue:5.7e-45 score:153.2 best_domain_score:152.9 name:PrmA;
sprot_desc Ribosomal protein L11 methyltransferase;
sprot_id sp|Q38XP2|PRMA_LACSS;
sprot_target db:uniprot_sprot|sp|Q38XP2|PRMA_LACSS 27 244 evalue:1.3e-25 qcov:83.20 identity:35.70;
82487 81813 CDS
ID metaerg.pl|02757
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter sp001564065;
genomedb_acc GCA_001564065.1;
genomedb_target db:genomedb|GCA_001564065.1|LKNA01000036.1_10 41 222 evalue:7.8e-60 qcov:81.20 identity:59.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
sp YES;
81813 81866 lipoprotein_signal_peptide
ID metaerg.pl|02758
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
85754 82545 CDS
ID metaerg.pl|02759
allgo_ids GO:0016788;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF04952; PF00246;
pfam_desc Succinylglutamate desuccinylase / Aspartoacylase family; Zinc carboxypeptidase;
pfam_id AstE_AspA; Peptidase_M14;
pfam_target db:Pfam-A.hmm|PF04952.14 evalue:1.1e-07 score:30.5 best_domain_score:14.3 name:AstE_AspA; db:Pfam-A.hmm|PF00246.24 evalue:2.7e-36 score:125.1 best_domain_score:69.8 name:Peptidase_M14;
sp YES;
82545 82658 signal_peptide
ID metaerg.pl|02760
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
85958 86929 CDS
ID metaerg.pl|02761
allec_ids 1.13.11.-;
allgo_ids GO:0005737; GO:0051213; GO:0046872; GO:0019439; GO:0009636;
allko_ids K00465; K15975;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Alsobacter;s__Alsobacter sp003004785;
genomedb_acc GCF_003004785.1;
genomedb_target db:genomedb|GCF_003004785.1|WP_106338302.1 9 322 evalue:5.5e-115 qcov:97.20 identity:65.30;
kegg_pathway_id 00626; 00362; 00590; 00351; 00623; 00643;
kegg_pathway_name Naphthalene and anthracene degradation; Benzoate degradation via hydroxylation; Arachidonic acid metabolism; 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation; 2,4-Dichlorobenzoate degradation; Styrene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id P661-PWY; PWY-5408; PWY-5163; P662-PWY; 2ASDEG-PWY; PWY-5405; PWY-6550; PWY-5407; PWY-5406; PWY-2501;
metacyc_pathway_name dibenzo-p-dioxin degradation;; 9-lipoxygenase and 9-hydroperoxide lyase pathway;; p-cumate degradation to 2-hydroxypentadienoate;; dibenzofuran degradation;; orthanilate degradation;; superpathway of betalain biosynthesis;; carbazole degradation;; 9-lipoxygenase and 9-allene oxide synthase pathway;; divinyl ether biosynthesis I;; fatty acid α-oxidation I;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;; FATTY-ACID-DERIVATIVE-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;; AROMATIC-COMPOUNDS-DEGRADATION;; AROMATIC-COMPOUNDS-DEGRADATION;; BETALAIN-ALKALOIDS; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; FATTY-ACID-DERIVATIVE-SYN;; Divinyl-Ether-Biosynthesis; Metabolic-Clusters;; Fatty-Acid-Degradation;;
pfam_acc PF00903;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:9.4e-24 score:83.3 best_domain_score:53.8 name:Glyoxalase;
sprot_desc Putative ring-cleaving dioxygenase MhqA;
sprot_id sp|O34689|MHQA_BACSU;
sprot_target db:uniprot_sprot|sp|O34689|MHQA_BACSU 9 322 evalue:3.3e-74 qcov:97.20 identity:47.00;
87766 86948 CDS
ID metaerg.pl|02762
allec_ids 1.11.1.-;
allgo_ids GO:0020037; GO:0046872; GO:0004601;
allko_ids K00435;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Fen-1247;s__Fen-1247 sp003155795;
genomedb_acc GCA_003155795.1;
genomedb_target db:genomedb|GCA_003155795.1|PMEM01000006.1_5 6 266 evalue:5.9e-70 qcov:96.00 identity:50.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-6401;
metacyc_pathway_name hispidol and hispidol 4'-O-β-D-glucoside biosynthesis;;
metacyc_pathway_type AURONE-SYN;;
pfam_acc PF06778;
pfam_desc Chlorite dismutase;
pfam_id Chlor_dismutase;
pfam_target db:Pfam-A.hmm|PF06778.12 evalue:9.4e-59 score:197.5 best_domain_score:197.1 name:Chlor_dismutase;
sprot_desc Putative heme-dependent peroxidase ABC3912;
sprot_id sp|Q5WB17|Y3912_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WB17|Y3912_BACSK 7 263 evalue:2.4e-49 qcov:94.50 identity:44.20;
87984 90350 CDS
ID metaerg.pl|02763
allgo_ids GO:0009279; GO:0016021; GO:0006811; GO:0055072; GO:0009405;
allko_ids K16089;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Longimonas;s__Longimonas halophila;
genomedb_acc GCF_002554705.1;
genomedb_target db:genomedb|GCF_002554705.1|WP_098061540.1 36 788 evalue:2.4e-236 qcov:95.60 identity:55.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF13715; PF13620; PF07715; PF00593;
pfam_desc CarboxypepD_reg-like domain; Carboxypeptidase regulatory-like domain; TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id CarbopepD_reg_2; CarboxypepD_reg; Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:6.5e-16 score:57.4 best_domain_score:56.7 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF13620.6 evalue:3.4e-17 score:61.7 best_domain_score:60.5 name:CarboxypepD_reg; db:Pfam-A.hmm|PF07715.15 evalue:5.8e-19 score:67.9 best_domain_score:67.9 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:5.7e-33 score:114.7 best_domain_score:111.5 name:TonB_dep_Rec;
sp YES;
sprot_desc Iron-regulated outer membrane virulence protein;
sprot_id sp|A5F9G0|IRGA_VIBC3;
sprot_target db:uniprot_sprot|sp|A5F9G0|IRGA_VIBC3 123 691 evalue:8.7e-20 qcov:72.20 identity:24.40;
87984 88079 signal_peptide
ID metaerg.pl|02764
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
90646 91968 CDS
ID metaerg.pl|02765
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
sp YES;
90646 90717 lipoprotein_signal_peptide
ID metaerg.pl|02766
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
93855 92020 CDS
ID metaerg.pl|02767
allgo_ids GO:0006355;
allko_ids K03407; K07654; K07646; K07641; K07673; K08475; K07711; K13533; K07683; K07651; K07642; K04486; K02484; K08282; K07645; K02491; K07643; K02668; K07710; K07653; K07636; K02482; K07678; K13587; K02030; K11527; K07676; K06379; K07709; K04757; K10125; K07675; K07680;
kegg_pathway_id 03090; 02020; 00340;
kegg_pathway_name Type II secretion system; Two-component system - General; Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00989; PF08447; PF08448;
pfam_desc PAS fold; PAS fold; PAS fold;
pfam_id PAS; PAS_3; PAS_4;
pfam_target db:Pfam-A.hmm|PF00989.25 evalue:2.2e-06 score:26.9 best_domain_score:25.7 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:1.9e-16 score:59.4 best_domain_score:58.4 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:1.5e-06 score:27.7 best_domain_score:26.1 name:PAS_4;
sp YES;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:4.4e-13 score:48.6 best_domain_score:47.7 name:TIGR00229;
tm_num 2;
92020 92130 signal_peptide
ID metaerg.pl|02768
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
93855 92020 transmembrane_helix
ID metaerg.pl|02769
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o92047-92115i92635-92703o;
94009 95046 CDS
ID metaerg.pl|02770
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5704;f__UBA5704;g__UBA5704;s__UBA5704 sp002420005;
genomedb_acc GCA_002420005.1;
genomedb_target db:genomedb|GCA_002420005.1|DIHE01000182.1_31 8 343 evalue:6.7e-103 qcov:97.40 identity:59.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
95160 96215 CDS
ID metaerg.pl|02771
allec_ids 2.5.1.72;
allgo_ids GO:0008987; GO:0009435; GO:0051539; GO:0005737; GO:0046872;
allko_ids K03517;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5704;f__UBA5704;g__UBA5704;s__UBA5704 sp002420005;
genomedb_acc GCA_002420005.1;
genomedb_target db:genomedb|GCA_002420005.1|DIHE01000182.1_32 19 350 evalue:2.9e-138 qcov:94.60 identity:73.80;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY0-781; PYRIDNUCSYN-PWY;
metacyc_pathway_name aspartate superpathway;; NAD de novo biosynthesis I (from aspartate);;
metacyc_pathway_type Super-Pathways;; NAD-SYN;;
pfam_acc PF02445;
pfam_desc Quinolinate synthetase A protein;
pfam_id NadA;
pfam_target db:Pfam-A.hmm|PF02445.16 evalue:2.5e-117 score:390.6 best_domain_score:390.4 name:NadA;
sprot_desc Quinolinate synthase A 2;
sprot_id sp|Q982F2|NADA2_RHILO;
sprot_target db:uniprot_sprot|sp|Q982F2|NADA2_RHILO 32 345 evalue:2.1e-122 qcov:89.50 identity:68.80;
tigrfam_acc TIGR00550;
tigrfam_desc quinolinate synthetase complex, A subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name nadA;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00550 evalue:3.6e-102 score:340.8 best_domain_score:340.6 name:TIGR00550;
96241 97878 CDS
ID metaerg.pl|02772
allec_ids 1.4.3.16;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0008734; GO:0044318; GO:0009435;
allko_ids K00239; K00278; K00394; K00234; K00244;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5704;f__UBA5704;g__UBA5704;s__UBA5704 sp002420005;
genomedb_acc GCA_002420005.1;
genomedb_target db:genomedb|GCA_002420005.1|DIHE01000182.1_33 3 537 evalue:4.6e-122 qcov:98.20 identity:50.50;
kegg_pathway_id 00252; 02020; 00450; 00760; 00190; 05012; 00650; 00720; 00920; 00020; 00632;
kegg_pathway_name Alanine and aspartate metabolism; Two-component system - General; Selenoamino acid metabolism; Nicotinate and nicotinamide metabolism; Oxidative phosphorylation; Parkinson's disease; Butanoate metabolism; Reductive carboxylate cycle (CO2 fixation); Sulfur metabolism; Citrate cycle (TCA cycle); Benzoate degradation via CoA ligation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY0-781; PYRIDNUCSYN-PWY;
metacyc_pathway_name aspartate superpathway;; NAD de novo biosynthesis I (from aspartate);;
metacyc_pathway_type Super-Pathways;; NAD-SYN;;
pfam_acc PF00890; PF07992; PF02910;
pfam_desc FAD binding domain; Pyridine nucleotide-disulphide oxidoreductase; Fumarate reductase flavoprotein C-term;
pfam_id FAD_binding_2; Pyr_redox_2; Succ_DH_flav_C;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:5.7e-77 score:258.8 best_domain_score:249.1 name:FAD_binding_2; db:Pfam-A.hmm|PF07992.14 evalue:1.9e-07 score:29.8 best_domain_score:17.5 name:Pyr_redox_2; db:Pfam-A.hmm|PF02910.20 evalue:5.2e-15 score:54.8 best_domain_score:49.4 name:Succ_DH_flav_C;
sp YES;
sprot_desc L-aspartate oxidase;
sprot_id sp|Q8U8J4|NADB_AGRFC;
sprot_target db:uniprot_sprot|sp|Q8U8J4|NADB_AGRFC 6 536 evalue:2.0e-103 qcov:97.40 identity:45.50;
tigrfam_acc TIGR00551;
tigrfam_desc L-aspartate oxidase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name nadB;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00551 evalue:9.1e-145 score:482.2 best_domain_score:472.2 name:TIGR00551;
tm_num 1;
96241 96321 signal_peptide
ID metaerg.pl|02773
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
96241 97878 transmembrane_helix
ID metaerg.pl|02774
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i96253-96321o;
97875 98717 CDS
ID metaerg.pl|02775
allec_ids 2.4.2.19;
allgo_ids GO:0004514; GO:0009435;
allko_ids K03813;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Rhodocista;s__Rhodocista sp001939945;
genomedb_acc GCA_001939945.1;
genomedb_target db:genomedb|GCA_001939945.1|MOEB01000018.1_56 4 279 evalue:1.3e-91 qcov:98.60 identity:65.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-3502; PYRIDNUCSYN-PWY; PWY0-781; PWY-5653; NADSYN-PWY;
metacyc_pathway_name superpathway of NAD biosynthesis in eukaryotes;; NAD de novo biosynthesis I (from aspartate);; aspartate superpathway;; NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde;; NAD de novo biosynthesis II (from tryptophan);;
metacyc_pathway_type NAD-SYN; Super-Pathways;; NAD-SYN;; Super-Pathways;; NAD-SYN;; NAD-SYN; Super-Pathways;;
pfam_acc PF01729; PF02749;
pfam_desc Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain;
pfam_id QRPTase_C; QRPTase_N;
pfam_target db:Pfam-A.hmm|PF01729.19 evalue:1.7e-57 score:193.1 best_domain_score:192.8 name:QRPTase_C; db:Pfam-A.hmm|PF02749.16 evalue:1.5e-26 score:91.5 best_domain_score:90.7 name:QRPTase_N;
sprot_desc Probable nicotinate-nucleotide pyrophosphorylase [carboxylating];
sprot_id sp|P77938|NADC_RHORU;
sprot_target db:uniprot_sprot|sp|P77938|NADC_RHORU 7 276 evalue:1.8e-76 qcov:96.40 identity:56.50;
tigrfam_acc TIGR00078;
tigrfam_desc nicotinate-nucleotide diphosphorylase (carboxylating);
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name nadC;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00078 evalue:8.9e-97 score:322.7 best_domain_score:322.5 name:TIGR00078;
99532 98732 CDS
ID metaerg.pl|02776
allec_ids 3.5.2.10;
allgo_ids GO:0047789; GO:0030145; GO:0008270; GO:0006601; GO:0006602;
allko_ids K01470;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000128.1_37 12 255 evalue:1.1e-76 qcov:91.70 identity:59.80;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id CRNFORCAT-PWY;
metacyc_pathway_name creatinine degradation I;;
metacyc_pathway_type Creatinine-Degradation;;
pfam_acc PF02633;
pfam_desc Creatinine amidohydrolase;
pfam_id Creatininase;
pfam_target db:Pfam-A.hmm|PF02633.14 evalue:1.7e-60 score:203.7 best_domain_score:203.6 name:Creatininase;
sprot_desc Creatinine amidohydrolase;
sprot_id sp|P83772|CRNA_PSEPU;
sprot_target db:uniprot_sprot|sp|P83772|CRNA_PSEPU 7 260 evalue:2.0e-16 qcov:95.50 identity:30.50;
101614 99719 CDS
ID metaerg.pl|02777
allec_ids 4.1.1.19;
allgo_ids GO:0003824; GO:0008792; GO:0046872; GO:0006527; GO:0033388; GO:0008295;
allko_ids K01583; K01586; K01585;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90921.1 1 627 evalue:5.4e-276 qcov:99.40 identity:73.00;
kegg_pathway_id 00220; 00251; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Glutamate metabolism; Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id ARG+POLYAMINE-SYN; POLYAMINSYN3-PWY; PWY-6305; PWY-40; PWY-43; POLYAMSYN-PWY; ARGDEG-III-PWY; PWY0-823; PWY0-1299;
metacyc_pathway_name superpathway of arginine and polyamine biosynthesis;; superpathway of polyamine biosynthesis II;; putrescine biosynthesis IV;; putrescine biosynthesis I;; putrescine biosynthesis II;; superpathway of polyamine biosynthesis I;; L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway);; L-arginine degradation III (arginine decarboxylase/agmatinase pathway);; arginine dependent acid resistance;;
metacyc_pathway_type Polyamine-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; Putrescine-Biosynthesis;; Putrescine-Biosynthesis;; Putrescine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-DEG;; ARGININE-DEG;; Acid-Resistance;;
pfam_acc PF17944; PF17810; PF02784;
pfam_desc Arginine decarboxylase C-terminal helical extension; Arginine decarboxylase helical bundle domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain;
pfam_id Arg_decarbox_C; Arg_decarb_HB; Orn_Arg_deC_N;
pfam_target db:Pfam-A.hmm|PF17944.1 evalue:2.6e-16 score:59.1 best_domain_score:55.7 name:Arg_decarbox_C; db:Pfam-A.hmm|PF17810.1 evalue:2.8e-21 score:74.8 best_domain_score:73.2 name:Arg_decarb_HB; db:Pfam-A.hmm|PF02784.16 evalue:6.5e-50 score:169.0 best_domain_score:168.7 name:Orn_Arg_deC_N;
sprot_desc Biosynthetic arginine decarboxylase;
sprot_id sp|Q8A2B1|SPEA_BACTN;
sprot_target db:uniprot_sprot|sp|Q8A2B1|SPEA_BACTN 2 627 evalue:2.5e-171 qcov:99.20 identity:46.40;
tigrfam_acc TIGR01273;
tigrfam_desc arginine decarboxylase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name speA;
tigrfam_sub1role Polyamine biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01273 evalue:5.7e-239 score:793.9 best_domain_score:793.7 name:TIGR01273;
101816 102307 CDS
ID metaerg.pl|02778
allgo_ids GO:0006812; GO:0008324; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__UBA2778;g__UBA2778;s__UBA2778 sp002352385;
genomedb_acc GCA_002352385.1;
genomedb_target db:genomedb|GCA_002352385.1|DEII01000153.1_21 12 160 evalue:3.5e-25 qcov:91.40 identity:44.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01899;
pfam_desc Na+/H+ ion antiporter subunit;
pfam_id MNHE;
pfam_target db:Pfam-A.hmm|PF01899.16 evalue:2.3e-21 score:75.3 best_domain_score:75.0 name:MNHE;
tm_num 2;
101816 102307 transmembrane_helix
ID metaerg.pl|02779
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i101834-101902o101930-101998i;
102304 102597 CDS
ID metaerg.pl|02780
allgo_ids GO:0015075; GO:0016021; GO:0034220;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalobacterales;f__Thiohalobacteraceae;g__Thiohalobacter;s__Thiohalobacter thiocyanaticus;
genomedb_acc GCF_002356355.1;
genomedb_target db:genomedb|GCF_002356355.1|WP_096364315.1 10 90 evalue:9.9e-20 qcov:83.50 identity:67.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF04066;
pfam_desc Multiple resistance and pH regulation protein F (MrpF / PhaF);
pfam_id MrpF_PhaF;
pfam_target db:Pfam-A.hmm|PF04066.13 evalue:4.1e-12 score:45.5 best_domain_score:45.5 name:MrpF_PhaF;
tm_num 3;
102304 102597 transmembrane_helix
ID metaerg.pl|02781
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o102313-102381i102400-102468o102478-102537i;
102587 102952 CDS
ID metaerg.pl|02782
allgo_ids GO:0005451; GO:0015672; GO:1902600;
allko_ids K05571;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas nitrosa;
genomedb_acc GCF_003051105.1;
genomedb_target db:genomedb|GCF_003051105.1|WP_090667922.1 9 103 evalue:3.5e-22 qcov:78.50 identity:55.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF03334;
pfam_desc Na+/H+ antiporter subunit;
pfam_id PhaG_MnhG_YufB;
pfam_target db:Pfam-A.hmm|PF03334.14 evalue:4.4e-25 score:87.0 best_domain_score:86.6 name:PhaG_MnhG_YufB;
sprot_desc hypothetical protein;
sprot_id sp|O58672|Y944_PYRHO;
sprot_target db:uniprot_sprot|sp|O58672|Y944_PYRHO 17 103 evalue:1.7e-07 qcov:71.90 identity:35.60;
tigrfam_acc TIGR01300;
tigrfam_desc monovalent cation/proton antiporter, MnhG/PhaG subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name CPA3_mnhG_phaG;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01300 evalue:7.9e-19 score:66.9 best_domain_score:66.6 name:TIGR01300;
tm_num 2;
102587 102952 transmembrane_helix
ID metaerg.pl|02783
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i102623-102691o102794-102862i;
102949 103989 CDS
ID metaerg.pl|02784
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter;s__Rubrobacter radiotolerans;
genomedb_acc GCF_900175965.1;
genomedb_target db:genomedb|GCF_900175965.1|WP_051590045.1 2 333 evalue:8.1e-56 qcov:96.00 identity:43.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF13244; PF04039;
pfam_desc Domain of unknown function (DUF4040); Domain related to MnhB subunit of Na+/H+ antiporter;
pfam_id DUF4040; MnhB;
pfam_target db:Pfam-A.hmm|PF13244.6 evalue:1.7e-16 score:59.4 best_domain_score:59.4 name:DUF4040; db:Pfam-A.hmm|PF04039.13 evalue:1.1e-12 score:47.6 best_domain_score:47.6 name:MnhB;
tm_num 9;
102949 103989 transmembrane_helix
ID metaerg.pl|02785
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o102958-103026i103045-103098o103111-103164i103252-103320o103429-103482i103543-103611o103624-103692i103729-103797o103810-103878i;
103986 104333 CDS
ID metaerg.pl|02786
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalobacterales;f__Thiohalobacteraceae;g__UBA9214;s__UBA9214 sp003454335;
genomedb_acc GCA_003454335.1;
genomedb_target db:genomedb|GCA_003454335.1|HAJ92289.1 1 98 evalue:1.0e-15 qcov:85.20 identity:51.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00420;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
pfam_id Oxidored_q2;
pfam_target db:Pfam-A.hmm|PF00420.24 evalue:1.5e-15 score:55.9 best_domain_score:55.6 name:Oxidored_q2;
tm_num 3;
103986 104333 transmembrane_helix
ID metaerg.pl|02787
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o103995-104054i104067-104135o104178-104246i;
104330 105817 CDS
ID metaerg.pl|02788
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
allko_ids K00343;
genomedb_OC d__Bacteria;p__Tectomicrobia;c__Entotheonellia;o__Entotheonellales;f__Entotheonellaceae;g__Entotheonella;s__Entotheonella factor;
genomedb_acc GCA_000522425.1;
genomedb_target db:genomedb|GCA_000522425.1|ETW97987.1 7 490 evalue:4.9e-115 qcov:97.80 identity:52.70;
kegg_pathway_id 00190; 00130;
kegg_pathway_name Oxidative phosphorylation; Ubiquinone biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF10125; PF00361;
pfam_desc NADH dehydrogenase I, subunit N related protein; Proton-conducting membrane transporter;
pfam_id NADHdeh_related; Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF10125.9 evalue:8.2e-08 score:31.1 best_domain_score:29.9 name:NADHdeh_related; db:Pfam-A.hmm|PF00361.20 evalue:5e-57 score:192.6 best_domain_score:191.7 name:Proton_antipo_M;
sprot_desc NADH-quinone oxidoreductase subunit N;
sprot_id sp|B0TH87|NUON_HELMI;
sprot_target db:uniprot_sprot|sp|B0TH87|NUON_HELMI 72 489 evalue:1.3e-29 qcov:84.40 identity:31.20;
tm_num 14;
104330 105817 transmembrane_helix
ID metaerg.pl|02789
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o104345-104404i104423-104491o104549-104617i104678-104746o104759-104818i104852-104920o104963-105031i105068-105127o105170-105229i105248-105316o105344-105412i105473-105541o105584-105652i105719-105772o;
105811 107319 CDS
ID metaerg.pl|02790
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
allko_ids K05568;
genomedb_OC d__Bacteria;p__Tectomicrobia;c__Entotheonellia;o__Entotheonellales;f__Entotheonellaceae;g__Entotheonella;s__Entotheonella factor;
genomedb_acc GCA_000522425.1;
genomedb_target db:genomedb|GCA_000522425.1|ETW97986.1 8 499 evalue:3.9e-152 qcov:98.00 identity:60.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00361; PF00662;
pfam_desc Proton-conducting membrane transporter; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus;
pfam_id Proton_antipo_M; Proton_antipo_N;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:2.4e-54 score:183.8 best_domain_score:182.5 name:Proton_antipo_M; db:Pfam-A.hmm|PF00662.20 evalue:1.5e-06 score:27.4 best_domain_score:27.4 name:Proton_antipo_N;
sprot_desc NADH-quinone oxidoreductase subunit N;
sprot_id sp|B1I6I5|NUON_DESAP;
sprot_target db:uniprot_sprot|sp|B1I6I5|NUON_DESAP 11 482 evalue:1.3e-48 qcov:94.00 identity:33.20;
tm_num 12;
105811 107319 transmembrane_helix
ID metaerg.pl|02791
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o105838-105897i105958-106017o106060-106128i106165-106233o106345-106413i106450-106518o106654-106722i106741-106800o106858-106926i106945-107013o107056-107124i107206-107265o;
107319 109148 CDS
ID metaerg.pl|02792
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Accumulibacter;s__Accumulibacter phosphatis_A;
genomedb_acc GCA_000987445.1;
genomedb_target db:genomedb|GCA_000987445.1|LBIU01000366.1_2 5 608 evalue:7.0e-95 qcov:99.20 identity:43.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:9.4e-37 score:126.0 best_domain_score:124.6 name:Proton_antipo_M;
tm_num 16;
107319 109148 transmembrane_helix
ID metaerg.pl|02793
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o107328-107396i107433-107501o107544-107612i107631-107690o107700-107759i107796-107864o107931-107999i108012-108080o108123-108191i108225-108284o108312-108380i108438-108506o108558-108626i108687-108755o108798-108866i109074-109142o;
110143 109469 CDS
ID metaerg.pl|02794
allgo_ids GO:0006865; GO:0016020;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Herbidospora;s__Herbidospora cretacea;
genomedb_acc GCF_001570605.1;
genomedb_target db:genomedb|GCF_001570605.1|WP_082801367.1 2 203 evalue:1.1e-29 qcov:90.20 identity:39.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01810;
pfam_desc LysE type translocator;
pfam_id LysE;
pfam_target db:Pfam-A.hmm|PF01810.18 evalue:1.3e-08 score:33.8 best_domain_score:33.5 name:LysE;
tm_num 6;
110143 109469 transmembrane_helix
ID metaerg.pl|02795
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology o109481-109549i109583-109651o109661-109729i109787-109855o109898-109966i110003-110071o;
111441 110140 CDS
ID metaerg.pl|02796
allec_ids 4.4.1.11;
allgo_ids GO:0030170; GO:0047982; GO:0018826;
genomedb_OC d__Bacteria;p__Desulfobacterota_A;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Pseudodesulfovibrio;s__Pseudodesulfovibrio dechloracetivorans;
genomedb_acc GCF_001874525.1;
genomedb_target db:genomedb|GCF_001874525.1|WP_071545217.1 1 428 evalue:1.4e-137 qcov:98.80 identity:60.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-701;
metacyc_pathway_name L-methionine degradation II;;
metacyc_pathway_type METHIONINE-DEG;;
pfam_acc PF00266; PF01053; PF06838;
pfam_desc Aminotransferase class-V; Cys/Met metabolism PLP-dependent enzyme; Methionine gamma-lyase;
pfam_id Aminotran_5; Cys_Met_Meta_PP; Met_gamma_lyase;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:1.1e-06 score:27.1 best_domain_score:26.5 name:Aminotran_5; db:Pfam-A.hmm|PF01053.20 evalue:8.3e-125 score:415.5 best_domain_score:408.0 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF06838.11 evalue:2.5e-06 score:25.5 best_domain_score:22.0 name:Met_gamma_lyase;
sprot_desc L-methionine gamma-lyase;
sprot_id sp|P13254|MEGL_PSEPU;
sprot_target db:uniprot_sprot|sp|P13254|MEGL_PSEPU 12 426 evalue:9.5e-77 qcov:95.80 identity:41.20;
113030 111438 CDS
ID metaerg.pl|02797
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Salinibacter;s__Salinibacter sp003023125;
genomedb_acc GCA_003023125.1;
genomedb_target db:genomedb|GCA_003023125.1|PSQ61607.1 1 527 evalue:1.1e-213 qcov:99.40 identity:66.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF07364; PF07171;
pfam_desc Metallopeptidase family M81; MlrC C-terminus;
pfam_id DUF1485; MlrC_C;
pfam_target db:Pfam-A.hmm|PF07364.12 evalue:3.1e-70 score:235.9 best_domain_score:235.5 name:DUF1485; db:Pfam-A.hmm|PF07171.12 evalue:4.4e-17 score:62.1 best_domain_score:61.2 name:MlrC_C;
sp YES;
111438 111521 signal_peptide
ID metaerg.pl|02798
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
113232 113651 CDS
ID metaerg.pl|02799
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
tm_num 4;
113232 113651 transmembrane_helix
ID metaerg.pl|02800
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i113298-113366o113394-113453i113472-113540o113550-113618i;
113779 115299 CDS
ID metaerg.pl|02801
allec_ids 1.2.1.31;
allgo_ids GO:0016491; GO:0055114; GO:0005829; GO:0005739; GO:0005634; GO:0008802; GO:0043878; GO:0004043; GO:0019285;
allko_ids K00128; K14085; K00294; K13821; K00155;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter barkolensis;
genomedb_acc GCF_002834295.1;
genomedb_target db:genomedb|GCF_002834295.1|WP_101073386.1 1 506 evalue:3.7e-235 qcov:100.00 identity:77.30;
kegg_pathway_id 00071; 00631; 00340; 00410; 00251; 00310; 00624; 00010; 00281; 00280; 00626; 00650; 00640; 00561; 00620; 00330; 00220; 00903; 00120; 00380; 00641;
kegg_pathway_name Fatty acid metabolism; 1,2-Dichloroethane degradation; Histidine metabolism; beta-Alanine metabolism; Glutamate metabolism; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis; Geraniol degradation; Valine, leucine and isoleucine degradation; Naphthalene and anthracene degradation; Butanoate metabolism; Propanoate metabolism; Glycerolipid metabolism; Pyruvate metabolism; Arginine and proline metabolism; Urea cycle and metabolism of amino groups; Limonene and pinene degradation; Bile acid biosynthesis; Tryptophan metabolism; 3-Chloroacrylic acid degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
metacyc_pathway_id PWY-5324; PWY-5314; PWY-5327; PWY-5298;
metacyc_pathway_name L-lysine degradation IX;; L-lysine degradation VIII;; superpathway of L-lysine degradation;; L-lysine degradation VI;;
metacyc_pathway_type LYSINE-DEG;; LYSINE-DEG;; LYSINE-DEG; Super-Pathways;; LYSINE-DEG;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:2e-127 score:424.7 best_domain_score:424.5 name:Aldedh;
sprot_desc Alpha-aminoadipic semialdehyde dehydrogenase;
sprot_id sp|Q2KJC9|AL7A1_BOVIN;
sprot_target db:uniprot_sprot|sp|Q2KJC9|AL7A1_BOVIN 5 504 evalue:1.9e-145 qcov:98.80 identity:52.50;
116460 115360 CDS
ID metaerg.pl|02802
allgo_ids GO:0007165; GO:0016021;
allko_ids K07652; K07646; K07641; K07673; K07639; K03407; K07654; K07777; K07682; K11623; K07718; K02478; K08884; K07683; K07778; K02484; K07642; K07704; K08282; K07640; K01768; K07656; K07674; K02668; K07638; K07653; K07636; K08801; K02480; K07676; K06379; K07675; K07680; K04757; K11617; K02486;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000207.1_43 14 364 evalue:7.5e-52 qcov:95.90 identity:41.80;
kegg_pathway_id 03090; 02020; 00230;
kegg_pathway_name Type II secretion system; Two-component system - General; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00672; PF02518; PF13581; PF07730;
pfam_desc HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-like ATPase domain; Histidine kinase;
pfam_id HAMP; HATPase_c; HATPase_c_2; HisKA_3;
pfam_target db:Pfam-A.hmm|PF00672.25 evalue:7e-06 score:25.6 best_domain_score:25.6 name:HAMP; db:Pfam-A.hmm|PF02518.26 evalue:1.2e-09 score:37.8 best_domain_score:36.4 name:HATPase_c; db:Pfam-A.hmm|PF13581.6 evalue:2.5e-07 score:29.9 best_domain_score:28.4 name:HATPase_c_2; db:Pfam-A.hmm|PF07730.13 evalue:1.1e-09 score:37.8 best_domain_score:37.8 name:HisKA_3;
tm_num 2;
116460 115360 transmembrane_helix
ID metaerg.pl|02803
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
topology i115480-115548o115561-115620i;
116664 117746 CDS
ID metaerg.pl|02804
allgo_ids GO:0000155; GO:0000160; GO:0016021; GO:0046983;
allko_ids K04486; K02484; K07642; K11711; K01090; K02491; K08282; K07704; K07645; K07677; K07708; K07652; K07673; K07639; K07646; K07641; K03407; K07777; K07682; K07654; K07718; K11623; K07651; K07648; K02478; K07679; K13533; K08884; K07711; K07768; K07683; K07778; K07709; K10681; K07676; K06379; K01769; K07675; K10942; K13040; K07647; K07680; K11357; K02342; K10125; K04757; K11617; K07769; K02486; K11383; K01768; K07656; K07710; K07716; K02489; K07674; K08479; K03388; K02668; K11527; K07636; K07653; K02480; K08801; K02482;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000207.1_42 13 334 evalue:9.6e-76 qcov:89.40 identity:49.10;
kegg_pathway_id 05111; 00230; 00790; 03030; 00340; 02020; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Folate biosynthesis; DNA replication; Histidine metabolism; Two-component system - General; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF02518; PF07730; PF00989; PF08448; PF13188; PF13426;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase; PAS fold; PAS fold; PAS domain; PAS domain;
pfam_id HATPase_c; HisKA_3; PAS; PAS_4; PAS_8; PAS_9;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:2.9e-08 score:33.4 best_domain_score:31.8 name:HATPase_c; db:Pfam-A.hmm|PF07730.13 evalue:2e-13 score:49.9 best_domain_score:48.5 name:HisKA_3; db:Pfam-A.hmm|PF00989.25 evalue:3.6e-15 score:55.2 best_domain_score:52.9 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:6.1e-16 score:57.9 best_domain_score:56.2 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:3.4e-11 score:42.1 best_domain_score:40.7 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:3.3e-13 score:49.0 best_domain_score:48.1 name:PAS_9;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:6.5e-23 score:80.4 best_domain_score:79.2 name:TIGR00229;
117739 118401 CDS
ID metaerg.pl|02805
allgo_ids GO:0006355; GO:0005737; GO:0003677; GO:0000160;
allko_ids K02484; K07642; K11231; K08282; K07677; K07652; K07641; K07646; K07639; K07673; K03407; K07654; K07682; K07651; K07679; K07648; K07778; K07768; K07644; K06379; K07676; K10681; K01769; K07675; K07647; K04757; K11357; K12767; K02486; K11383; K07710; K02489; K07716; K08479; K07674; K10916; K02668; K03388; K10715; K07678; K11527; K07653; K07636; K02482; K02480; K11618;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000207.1_41 6 219 evalue:4.2e-82 qcov:97.30 identity:75.70;
kegg_pathway_id 04011; 02020; 03090; 05111; 00230; 00790;
kegg_pathway_name MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Vibrio cholerae pathogenic cycle; Purine metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF00196; PF00072; PF08281;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain; Sigma-70, region 4;
pfam_id GerE; Response_reg; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:3e-20 score:70.8 best_domain_score:70.2 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:1.3e-27 score:95.4 best_domain_score:94.7 name:Response_reg; db:Pfam-A.hmm|PF08281.12 evalue:1.2e-07 score:30.6 best_domain_score:29.7 name:Sigma70_r4_2;
sprot_desc Transcriptional regulatory protein LiaR;
sprot_id sp|O32197|LIAR_BACSU;
sprot_target db:uniprot_sprot|sp|O32197|LIAR_BACSU 5 212 evalue:7.8e-35 qcov:94.50 identity:39.90;
118398 120149 CDS
ID metaerg.pl|02806
allec_ids 3.5.1.81;
allgo_ids GO:0016787; GO:0005737; GO:0047420;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__UBA2664;s__UBA2664 sp002359315;
genomedb_acc GCA_002359315.1;
genomedb_target db:genomedb|GCA_002359315.1|DEMS01000023.1_43 59 536 evalue:8.4e-130 qcov:82.00 identity:50.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:5e-08 score:31.9 best_domain_score:17.9 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:3.3e-20 score:72.2 best_domain_score:41.2 name:Amidohydro_3;
sp YES;
sprot_desc D-aminoacylase;
sprot_id sp|P72349|NDAD_ALCXX;
sprot_target db:uniprot_sprot|sp|P72349|NDAD_ALCXX 57 555 evalue:1.1e-48 qcov:85.60 identity:31.90;
118398 118484 lipoprotein_signal_peptide
ID metaerg.pl|02807
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
120150 120770 CDS
ID metaerg.pl|02808
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Planctomycetota;c__UBA1135;o__UBA2386;f__UBA2386;g__SZUA-250;s__SZUA-250 sp003235605;
genomedb_acc GCA_003235605.1;
genomedb_target db:genomedb|GCA_003235605.1|QJVU01000272.1_3 4 207 evalue:3.7e-80 qcov:98.60 identity:71.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0145746; 13.7083; 1.46262; 12.2311; ;
pfam_acc PF01979; PF04909; PF01026;
pfam_desc Amidohydrolase family; Amidohydrolase; TatD related DNase;
pfam_id Amidohydro_1; Amidohydro_2; TatD_DNase;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:3e-07 score:29.3 best_domain_score:29.0 name:Amidohydro_1; db:Pfam-A.hmm|PF04909.14 evalue:1.3e-25 score:90.0 best_domain_score:88.9 name:Amidohydro_2; db:Pfam-A.hmm|PF01026.21 evalue:3.7e-07 score:29.0 best_domain_score:28.5 name:TatD_DNase;
>Feature NODE_14_length_119204_cov_14.6201
476 3 CDS
ID metaerg.pl|02809
allec_ids 2.7.6.5;
allgo_ids GO:0005524; GO:0005525; GO:0008728; GO:0016301; GO:0015969;
allko_ids K00951; K01139;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797874.1 1 158 evalue:2.2e-72 qcov:100.00 identity:91.10;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PPGPPMET-PWY;
metacyc_pathway_name ppGpp biosynthesis;;
metacyc_pathway_type Metabolic-Regulators;;
pfam_acc PF01966; PF13328;
pfam_desc HD domain; HD domain;
pfam_id HD; HD_4;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:9.9e-11 score:41.2 best_domain_score:40.3 name:HD; db:Pfam-A.hmm|PF13328.6 evalue:7.5e-42 score:141.9 best_domain_score:141.8 name:HD_4;
sprot_desc GTP pyrophosphokinase rsh;
sprot_id sp|Q8YG65|RSH_BRUME;
sprot_target db:uniprot_sprot|sp|Q8YG65|RSH_BRUME 1 155 evalue:2.0e-40 qcov:98.10 identity:56.10;
875 516 CDS
ID metaerg.pl|02810
allec_ids 2.7.7.6;
allgo_ids GO:0003677; GO:0003899; GO:0006351;
allko_ids K03055; K03060;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468545.1 1 119 evalue:3.9e-50 qcov:100.00 identity:89.90;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01192;
pfam_desc RNA polymerase Rpb6;
pfam_id RNA_pol_Rpb6;
pfam_target db:Pfam-A.hmm|PF01192.22 evalue:1e-13 score:50.2 best_domain_score:49.1 name:RNA_pol_Rpb6;
sprot_desc DNA-directed RNA polymerase subunit omega;
sprot_id sp|Q5LNK0|RPOZ_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LNK0|RPOZ_RUEPO 1 117 evalue:7.7e-45 qcov:98.30 identity:84.60;
tigrfam_acc TIGR00690;
tigrfam_desc DNA-directed RNA polymerase, omega subunit;
tigrfam_mainrole Transcription;
tigrfam_name rpoZ;
tigrfam_sub1role DNA-dependent RNA polymerase;
tigrfam_target db:TIGRFAMs.hmm|TIGR00690 evalue:1.9e-17 score:62.3 best_domain_score:61.5 name:TIGR00690;
1558 983 CDS
ID metaerg.pl|02811
allec_ids 2.7.6.3;
allgo_ids GO:0003848; GO:0009396; GO:0005524; GO:0016301; GO:0046656; GO:0046654;
allko_ids K00950;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479379.1 9 191 evalue:9.9e-56 qcov:95.80 identity:57.90;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-6548; PWY-6147; ALL-CHORISMATE-PWY; FOLSYN-PWY;
metacyc_pathway_name ; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; superpathway of chorismate metabolism;; superpathway of tetrahydrofolate biosynthesis and salvage;;
metacyc_pathway_type ; 6-HM-Dihydropterin-PP-Biosynthesis;; Super-Pathways;; Folate-Biosynthesis; Super-Pathways;;
pfam_acc PF01288;
pfam_desc 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK);
pfam_id HPPK;
pfam_target db:Pfam-A.hmm|PF01288.20 evalue:6.3e-27 score:93.6 best_domain_score:93.2 name:HPPK;
sprot_desc 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;
sprot_id sp|P72736|HPPK_SYNY3;
sprot_target db:uniprot_sprot|sp|P72736|HPPK_SYNY3 8 190 evalue:4.9e-17 qcov:95.80 identity:30.10;
tigrfam_acc TIGR01498;
tigrfam_desc 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name folK;
tigrfam_sub1role Folic acid;
tigrfam_target db:TIGRFAMs.hmm|TIGR01498 evalue:3.7e-27 score:94.2 best_domain_score:91.8 name:TIGR01498;
1678 2253 CDS
ID metaerg.pl|02812
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479190.1 1 191 evalue:1.1e-94 qcov:100.00 identity:92.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01936;
pfam_desc NYN domain;
pfam_id NYN;
pfam_target db:Pfam-A.hmm|PF01936.18 evalue:6.3e-41 score:139.5 best_domain_score:139.2 name:NYN;
3077 2310 CDS
ID metaerg.pl|02813
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092890571.1 2 254 evalue:2.4e-81 qcov:99.20 identity:60.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01925;
pfam_desc Sulfite exporter TauE/SafE;
pfam_id TauE;
pfam_target db:Pfam-A.hmm|PF01925.19 evalue:4.8e-20 score:71.4 best_domain_score:71.2 name:TauE;
tm_num 8;
3077 2310 transmembrane_helix
ID metaerg.pl|02814
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i2322-2390o2427-2495i2556-2624o2637-2705i2742-2810o2838-2906i2925-2984o3012-3065i;
3264 4925 CDS
ID metaerg.pl|02815
allec_ids 1.3.8.12;
allgo_ids GO:0016627; GO:0055114; GO:0003995; GO:0071949; GO:0050660; GO:0052890;
allko_ids K00249; K08098; K11538; K11731; K00252; K00232; K00120; K09478; K00248; K11410; K00253; K06446; K14448;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797845.1 1 553 evalue:5.1e-270 qcov:100.00 identity:85.50;
kegg_pathway_id 00361; 00632; 00380; 01040; 00903; 00640; 00650; 00592; 00624; 00310; 00280; 01031; 00626; 00930; 00071; 00410;
kegg_pathway_name gamma-Hexachlorocyclohexane degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Propanoate metabolism; Butanoate metabolism; alpha-Linolenic acid metabolism; 1- and 2-Methylnaphthalene degradation; Lysine degradation; Valine, leucine and isoleucine degradation; Glycan structures - biosynthesis 2; Naphthalene and anthracene degradation; Caprolactam degradation; Fatty acid metabolism; beta-Alanine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:4e-41 score:140.0 best_domain_score:140.0 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:1.9e-13 score:50.1 best_domain_score:50.1 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:3.5e-19 score:68.0 best_domain_score:67.1 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:1.5e-32 score:111.8 best_domain_score:110.4 name:Acyl-CoA_dh_N;
sprot_desc (2S)-methylsuccinyl-CoA dehydrogenase;
sprot_id sp|D3JV03|MCD_RHOSH;
sprot_target db:uniprot_sprot|sp|D3JV03|MCD_RHOSH 11 553 evalue:5.7e-236 qcov:98.20 identity:76.60;
6270 5053 CDS
ID metaerg.pl|02816
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468549.1 1 405 evalue:1.6e-167 qcov:100.00 identity:71.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF03441;
pfam_desc FAD binding domain of DNA photolyase;
pfam_id FAD_binding_7;
pfam_target db:Pfam-A.hmm|PF03441.14 evalue:1.5e-22 score:79.4 best_domain_score:78.7 name:FAD_binding_7;
7393 6323 CDS
ID metaerg.pl|02817
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479187.1 1 349 evalue:3.8e-149 qcov:98.00 identity:81.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF02646;
pfam_desc RmuC family;
pfam_id RmuC;
pfam_target db:Pfam-A.hmm|PF02646.16 evalue:1e-52 score:178.4 best_domain_score:177.2 name:RmuC;
tm_num 1;
7393 6323 transmembrane_helix
ID metaerg.pl|02818
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i6347-6403o;
9222 7390 CDS
ID metaerg.pl|02819
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0032300; GO:0016887;
allko_ids K02668; K01768; K07653; K07636; K06379; K04757; K07654; K03407; K07641; K07646; K07639; K07642; K02484; K08282; K03572;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479186.1 1 610 evalue:2.1e-264 qcov:100.00 identity:79.10;
kegg_pathway_id 03090; 03430; 02020; 00230;
kegg_pathway_name Type II secretion system; Mismatch repair; Two-component system - General; Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01119; PF02518; PF13589; PF08676;
pfam_desc DNA mismatch repair protein, C-terminal domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain;
pfam_id DNA_mis_repair; HATPase_c; HATPase_c_3; MutL_C;
pfam_target db:Pfam-A.hmm|PF01119.19 evalue:2.8e-32 score:110.1 best_domain_score:109.5 name:DNA_mis_repair; db:Pfam-A.hmm|PF02518.26 evalue:1.5e-06 score:27.9 best_domain_score:27.0 name:HATPase_c; db:Pfam-A.hmm|PF13589.6 evalue:3.2e-12 score:45.7 best_domain_score:45.0 name:HATPase_c_3; db:Pfam-A.hmm|PF08676.11 evalue:6.8e-48 score:161.4 best_domain_score:160.8 name:MutL_C;
sprot_desc DNA mismatch repair protein MutL;
sprot_id sp|Q2VYV5|MUTL_MAGSA;
sprot_target db:uniprot_sprot|sp|Q2VYV5|MUTL_MAGSA 12 610 evalue:3.9e-177 qcov:98.20 identity:57.20;
tigrfam_acc TIGR00585;
tigrfam_desc DNA mismatch repair protein MutL;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutl;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00585 evalue:2.3e-86 score:289.5 best_domain_score:289.2 name:TIGR00585;
10558 9263 CDS
ID metaerg.pl|02820
allgo_ids GO:0003824; GO:0046872;
allko_ids K07263;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468552.1 1 431 evalue:2.1e-186 qcov:100.00 identity:76.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00675; PF05193;
pfam_desc Insulinase (Peptidase family M16); Peptidase M16 inactive domain;
pfam_id Peptidase_M16; Peptidase_M16_C;
pfam_target db:Pfam-A.hmm|PF00675.20 evalue:2.4e-08 score:33.3 best_domain_score:32.6 name:Peptidase_M16; db:Pfam-A.hmm|PF05193.21 evalue:1.6e-23 score:82.9 best_domain_score:74.2 name:Peptidase_M16_C;
sp YES;
sprot_desc Uncharacterized zinc protease-like protein y4wB;
sprot_id sp|P55680|Y4WB_SINFN;
sprot_target db:uniprot_sprot|sp|P55680|Y4WB_SINFN 10 420 evalue:1.0e-62 qcov:95.40 identity:35.60;
9263 9313 signal_peptide
ID metaerg.pl|02821
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
11910 10555 CDS
ID metaerg.pl|02822
allec_ids 3.4.24.-;
allgo_ids GO:0016021; GO:0005886; GO:0046872; GO:0004222;
allko_ids K07263;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479184.1 1 448 evalue:9.4e-206 qcov:99.30 identity:79.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00675; PF05193;
pfam_desc Insulinase (Peptidase family M16); Peptidase M16 inactive domain;
pfam_id Peptidase_M16; Peptidase_M16_C;
pfam_target db:Pfam-A.hmm|PF00675.20 evalue:7.4e-25 score:86.9 best_domain_score:86.1 name:Peptidase_M16; db:Pfam-A.hmm|PF05193.21 evalue:1.8e-25 score:89.3 best_domain_score:88.7 name:Peptidase_M16_C;
sp YES;
sprot_desc Uncharacterized zinc protease y4wA;
sprot_id sp|P55679|Y4WA_SINFN;
sprot_target db:uniprot_sprot|sp|P55679|Y4WA_SINFN 19 451 evalue:1.1e-88 qcov:96.00 identity:41.10;
10555 10620 signal_peptide
ID metaerg.pl|02823
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
12501 12037 CDS
ID metaerg.pl|02824
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479183.1 1 154 evalue:9.8e-62 qcov:100.00 identity:73.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF14347;
pfam_desc Domain of unknown function (DUF4399);
pfam_id DUF4399;
pfam_target db:Pfam-A.hmm|PF14347.6 evalue:1.2e-32 score:111.4 best_domain_score:110.9 name:DUF4399;
sp YES;
12037 12096 signal_peptide
ID metaerg.pl|02825
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
13097 12573 CDS
ID metaerg.pl|02826
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797842.1 1 174 evalue:1.2e-71 qcov:100.00 identity:77.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF11233;
pfam_desc Protein of unknown function (DUF3035);
pfam_id DUF3035;
pfam_target db:Pfam-A.hmm|PF11233.8 evalue:2.2e-36 score:124.5 best_domain_score:124.2 name:DUF3035;
sp YES;
12573 12632 lipoprotein_signal_peptide
ID metaerg.pl|02827
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
13668 13186 CDS
ID metaerg.pl|02828
allec_ids 3.4.23.36;
allgo_ids GO:0004190; GO:0006508; GO:0016020; GO:0016021; GO:0005886;
allko_ids K03101;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797841.1 1 152 evalue:5.8e-65 qcov:95.00 identity:80.30;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01252;
pfam_desc Signal peptidase (SPase) II;
pfam_id Peptidase_A8;
pfam_target db:Pfam-A.hmm|PF01252.18 evalue:8e-31 score:106.4 best_domain_score:106.1 name:Peptidase_A8;
sprot_desc Lipoprotein signal peptidase;
sprot_id sp|Q1QIP9|LSPA_NITHX;
sprot_target db:uniprot_sprot|sp|Q1QIP9|LSPA_NITHX 3 156 evalue:8.2e-18 qcov:96.20 identity:39.00;
tigrfam_acc TIGR00077;
tigrfam_desc signal peptidase II;
tigrfam_mainrole Protein fate;
tigrfam_name lspA;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00077 evalue:1.3e-25 score:89.3 best_domain_score:89.1 name:TIGR00077;
tm_num 3;
13668 13186 transmembrane_helix
ID metaerg.pl|02829
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i13282-13350o13378-13431i13570-13638o;
15274 13685 CDS
ID metaerg.pl|02830
allec_ids 2.1.2.3; 3.5.4.10; 2.1.2.3 3.5.4.10;
allgo_ids GO:0003937; GO:0004643; GO:0006164; GO:0006189;
allko_ids K01492; K00602;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797840.1 1 529 evalue:1.5e-258 qcov:100.00 identity:87.10;
kegg_pathway_id 00230; 00670;
kegg_pathway_name Purine metabolism; One carbon pool by folate;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6124; PRPP-PWY; PWY-841; PWY-6123;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; inosine-5'-phosphate biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; inosine-5'-phosphate biosynthesis I;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;;
pfam_acc PF01808; PF02142;
pfam_desc AICARFT/IMPCHase bienzyme; MGS-like domain;
pfam_id AICARFT_IMPCHas; MGS;
pfam_target db:Pfam-A.hmm|PF01808.18 evalue:1.3e-116 score:388.5 best_domain_score:388.1 name:AICARFT_IMPCHas; db:Pfam-A.hmm|PF02142.22 evalue:7.6e-25 score:86.2 best_domain_score:85.3 name:MGS;
sprot_desc Bifunctional purine biosynthesis protein PurH;
sprot_id sp|A3PNE9|PUR9_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PNE9|PUR9_RHOS1 1 529 evalue:1.8e-231 qcov:100.00 identity:79.20;
tigrfam_acc TIGR00355;
tigrfam_desc phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purH;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00355 evalue:9.6e-206 score:683.7 best_domain_score:683.5 name:TIGR00355;
17051 15300 CDS
ID metaerg.pl|02831
allgo_ids GO:0016829; GO:0005737; GO:0005886; GO:0007049; GO:0051301;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468556.1 17 583 evalue:1.2e-224 qcov:97.30 identity:69.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF07940;
pfam_desc Heparinase II/III-like protein;
pfam_id Hepar_II_III;
pfam_target db:Pfam-A.hmm|PF07940.13 evalue:2.3e-59 score:200.1 best_domain_score:199.4 name:Hepar_II_III;
sprot_desc FtsZ-localized protein C;
sprot_id sp|A0A0H3C3S1|FZLC_CAUVN;
sprot_target db:uniprot_sprot|sp|A0A0H3C3S1|FZLC_CAUVN 31 563 evalue:4.3e-40 qcov:91.40 identity:31.20;
18423 17149 CDS
ID metaerg.pl|02832
allec_ids 2.1.1.176;
allgo_ids GO:0008168; GO:0005829; GO:0003723; GO:0009383; GO:0006355; GO:0070475;
allko_ids K03500;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468557.1 1 423 evalue:1.2e-173 qcov:99.80 identity:72.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF13649; PF01189; PF01029;
pfam_desc Methyltransferase domain; 16S rRNA methyltransferase RsmB/F; NusB family;
pfam_id Methyltransf_25; Methyltr_RsmB-F; NusB;
pfam_target db:Pfam-A.hmm|PF13649.6 evalue:2e-09 score:37.2 best_domain_score:35.9 name:Methyltransf_25; db:Pfam-A.hmm|PF01189.17 evalue:8.9e-43 score:145.5 best_domain_score:145.1 name:Methyltr_RsmB-F; db:Pfam-A.hmm|PF01029.18 evalue:5.7e-09 score:35.5 best_domain_score:35.1 name:NusB;
sprot_desc Ribosomal RNA small subunit methyltransferase B;
sprot_id sp|Q9I7A9|RSMB_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I7A9|RSMB_PSEAE 9 420 evalue:1.4e-45 qcov:97.20 identity:36.20;
18496 18714 CDS
ID metaerg.pl|02833
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_082700117.1 1 72 evalue:5.3e-18 qcov:100.00 identity:75.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF07896;
pfam_desc Protein of unknown function (DUF1674);
pfam_id DUF1674;
pfam_target db:Pfam-A.hmm|PF07896.12 evalue:3.9e-16 score:58.5 best_domain_score:58.0 name:DUF1674;
20232 19336 CDS
ID metaerg.pl|02834
allgo_ids GO:0003677; GO:0003700; GO:0006352; GO:0006355; GO:0016987; GO:0005737; GO:0009408; GO:0001123;
allko_ids K03089;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468560.1 1 297 evalue:2.7e-148 qcov:99.70 identity:90.20;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00140; PF04542; PF04545;
pfam_desc Sigma-70 factor, region 1.2; Sigma-70 region 2 ; Sigma-70, region 4;
pfam_id Sigma70_r1_2; Sigma70_r2; Sigma70_r4;
pfam_target db:Pfam-A.hmm|PF00140.20 evalue:4e-08 score:32.4 best_domain_score:31.2 name:Sigma70_r1_2; db:Pfam-A.hmm|PF04542.14 evalue:5.6e-17 score:60.5 best_domain_score:58.3 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:4.2e-18 score:63.8 best_domain_score:58.6 name:Sigma70_r4;
sprot_desc RNA polymerase sigma factor RpoH;
sprot_id sp|P0CAW9|RPOH_CAUVC;
sprot_target db:uniprot_sprot|sp|P0CAW9|RPOH_CAUVC 6 293 evalue:2.9e-101 qcov:96.60 identity:67.50;
tigrfam_acc TIGR02392; TIGR02937;
tigrfam_desc alternative sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family;
tigrfam_mainrole Transcription;
tigrfam_name rpoH_proteo; sigma70-ECF;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR02392 evalue:8.8e-111 score:369.0 best_domain_score:368.8 name:TIGR02392; db:TIGRFAMs.hmm|TIGR02937 evalue:2.2e-28 score:98.1 best_domain_score:97.2 name:TIGR02937;
21301 20354 CDS
ID metaerg.pl|02835
allec_ids 5.4.99.23; 5.4.99.-;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0120159; GO:0006364;
allko_ids K06180;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468561.1 1 301 evalue:9.1e-139 qcov:95.60 identity:81.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-6005; RIBOKIN-PWY; PWY-112; PWY-5377; PWY-6115; PWY-5672; PWY-6008; PWY-5203; PWY-6109; PWY-5992;
metacyc_pathway_name marneral biosynthesis;; ribose phosphorylation;; lupeol biosynthesis;; α-amyrin biosynthesis;; ; ginsenosides biosynthesis;; baruol biosynthesis;; soybean saponin I biosynthesis;; mangrove triterpenoid biosynthesis;; thalianol and derivatives biosynthesis;;
metacyc_pathway_type TRITERPENOID-SYN;; Sugars-And-Polysaccharides-Degradation;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; ; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;;
pfam_acc PF00849;
pfam_desc RNA pseudouridylate synthase;
pfam_id PseudoU_synth_2;
pfam_target db:Pfam-A.hmm|PF00849.22 evalue:1.1e-31 score:109.3 best_domain_score:108.7 name:PseudoU_synth_2;
sprot_desc Ribosomal large subunit pseudouridine synthase D;
sprot_id sp|P50513|RLUD_ZYMMO;
sprot_target db:uniprot_sprot|sp|P50513|RLUD_ZYMMO 1 300 evalue:2.0e-68 qcov:95.20 identity:49.00;
tigrfam_acc TIGR00005;
tigrfam_desc pseudouridine synthase, RluA family;
tigrfam_mainrole Protein synthesis;
tigrfam_name rluA_subfam;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00005 evalue:4.7e-78 score:261.6 best_domain_score:257.3 name:TIGR00005;
21426 21731 CDS
ID metaerg.pl|02836
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797835.1 1 99 evalue:3.9e-27 qcov:98.00 identity:68.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
tm_num 1;
21426 21731 transmembrane_helix
ID metaerg.pl|02837
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology o21483-21551i;
21798 22652 CDS
ID metaerg.pl|02838
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797837.1 1 276 evalue:1.1e-119 qcov:97.20 identity:77.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:2.4e-20 score:72.6 best_domain_score:72.0 name:Lactamase_B;
24149 22698 CDS
ID metaerg.pl|02839
allec_ids 2.7.7.-;
allgo_ids GO:0005524; GO:0000287; GO:0016779;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468564.1 4 483 evalue:1.7e-205 qcov:99.40 identity:74.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY4FS-4; PHOSLIPSYN2-PWY; PWY-6476; PWY-5354; THISYN-PWY; PWY-882;
metacyc_pathway_name phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; cytidylyl molybdenum cofactor biosynthesis;; ; superpathway of thiamine diphosphate biosynthesis I;; L-ascorbate biosynthesis I (L-galactose pathway);;
metacyc_pathway_type PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Cofactor-Biosynthesis;; ; Super-Pathways; Thiamine-Biosynthesis;; Ascorbate-Biosynthesis;;
pfam_acc PF02696;
pfam_desc Uncharacterized ACR, YdiU/UPF0061 family;
pfam_id UPF0061;
pfam_target db:Pfam-A.hmm|PF02696.14 evalue:2.1e-109 score:365.7 best_domain_score:365.5 name:UPF0061;
sprot_desc hypothetical protein;
sprot_id sp|B9KQ40|SELO_RHOSK;
sprot_target db:uniprot_sprot|sp|B9KQ40|SELO_RHOSK 6 483 evalue:1.6e-149 qcov:99.00 identity:58.70;
24666 24223 CDS
ID metaerg.pl|02840
allec_ids 1.8.4.12; 1.8.4.-;
allgo_ids GO:0033743; GO:0055114; GO:0030091; GO:0006979;
allko_ids K12267; K07305; K07304;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245486.1 1 147 evalue:9.3e-70 qcov:100.00 identity:83.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01641;
pfam_desc SelR domain;
pfam_id SelR;
pfam_target db:Pfam-A.hmm|PF01641.18 evalue:1.6e-48 score:163.0 best_domain_score:162.8 name:SelR;
sprot_desc Peptide methionine sulfoxide reductase MsrB 2;
sprot_id sp|Q92Y46|MSRB2_RHIME;
sprot_target db:uniprot_sprot|sp|Q92Y46|MSRB2_RHIME 4 146 evalue:2.1e-60 qcov:97.30 identity:72.00;
tigrfam_acc TIGR00357;
tigrfam_desc methionine-R-sulfoxide reductase;
tigrfam_mainrole Cellular processes;
tigrfam_name TIGR00357;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00357 evalue:1.1e-59 score:199.5 best_domain_score:199.2 name:TIGR00357;
24834 25208 CDS
ID metaerg.pl|02841
allgo_ids GO:0008137; GO:0009055; GO:0016020;
allko_ids K00329; K00356; K11352;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084634596.1 1 124 evalue:5.1e-61 qcov:100.00 identity:83.10;
kegg_pathway_id 00190; 00130;
kegg_pathway_name Oxidative phosphorylation; Ubiquinone biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF05071;
pfam_desc NADH ubiquinone oxidoreductase subunit NDUFA12;
pfam_id NDUFA12;
pfam_target db:Pfam-A.hmm|PF05071.16 evalue:4.4e-25 score:87.6 best_domain_score:87.3 name:NDUFA12;
25284 25694 CDS
ID metaerg.pl|02842
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797829.1 10 136 evalue:7.3e-45 qcov:93.40 identity:70.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF09923;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2155);
pfam_id DUF2155;
pfam_target db:Pfam-A.hmm|PF09923.9 evalue:1.5e-28 score:98.1 best_domain_score:97.7 name:DUF2155;
sp YES;
25284 25364 signal_peptide
ID metaerg.pl|02843
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
26296 25658 CDS
ID metaerg.pl|02844
allec_ids 2.3.2.6;
allgo_ids GO:0008914; GO:0030163; GO:0005737;
allko_ids K00684;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479374.1 5 212 evalue:3.4e-81 qcov:98.10 identity:72.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF03588;
pfam_desc Leucyl/phenylalanyl-tRNA protein transferase;
pfam_id Leu_Phe_trans;
pfam_target db:Pfam-A.hmm|PF03588.14 evalue:2.2e-64 score:215.3 best_domain_score:215.0 name:Leu_Phe_trans;
sprot_desc Leucyl/phenylalanyl-tRNA--protein transferase;
sprot_id sp|Q165G5|LFTR_ROSDO;
sprot_target db:uniprot_sprot|sp|Q165G5|LFTR_ROSDO 5 212 evalue:4.7e-69 qcov:98.10 identity:61.10;
tigrfam_acc TIGR00667;
tigrfam_desc leucyl/phenylalanyl-tRNA--protein transferase;
tigrfam_mainrole Protein fate;
tigrfam_name aat;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00667 evalue:7.4e-58 score:194.4 best_domain_score:194.0 name:TIGR00667;
26791 26306 CDS
ID metaerg.pl|02845
allgo_ids GO:0003723; GO:0006355; GO:0006353; GO:0031564;
allko_ids K03625;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797827.1 2 161 evalue:4.6e-62 qcov:99.40 identity:77.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01029;
pfam_desc NusB family;
pfam_id NusB;
pfam_target db:Pfam-A.hmm|PF01029.18 evalue:8.6e-26 score:90.0 best_domain_score:89.7 name:NusB;
sprot_desc Transcription antitermination protein NusB;
sprot_id sp|Q214H2|NUSB_RHOPB;
sprot_target db:uniprot_sprot|sp|Q214H2|NUSB_RHOPB 9 161 evalue:2.4e-25 qcov:95.00 identity:44.20;
tigrfam_acc TIGR01951;
tigrfam_desc transcription antitermination factor NusB;
tigrfam_mainrole Transcription;
tigrfam_name nusB;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR01951 evalue:8.1e-31 score:106.2 best_domain_score:106.0 name:TIGR01951;
27339 26788 CDS
ID metaerg.pl|02846
allec_ids 2.5.1.78;
allgo_ids GO:0009231; GO:0009349; GO:0000906;
allko_ids K00794;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468570.1 1 180 evalue:3.0e-78 qcov:98.40 identity:84.40;
kegg_pathway_id 00740;
kegg_pathway_name Riboflavin metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-6168; PWY-6167; RIBOSYN2-PWY;
metacyc_pathway_name flavin biosynthesis III (fungi);; flavin biosynthesis II (archaea);; flavin biosynthesis I (bacteria and plants);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00885;
pfam_desc 6,7-dimethyl-8-ribityllumazine synthase;
pfam_id DMRL_synthase;
pfam_target db:Pfam-A.hmm|PF00885.19 evalue:5.7e-38 score:129.1 best_domain_score:128.9 name:DMRL_synthase;
sprot_desc 6,7-dimethyl-8-ribityllumazine synthase;
sprot_id sp|Q28LT2|RISB_JANSC;
sprot_target db:uniprot_sprot|sp|Q28LT2|RISB_JANSC 1 164 evalue:3.9e-48 qcov:89.60 identity:60.40;
tigrfam_acc TIGR00114;
tigrfam_desc 6,7-dimethyl-8-ribityllumazine synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name lumazine-synth;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00114 evalue:3.8e-26 score:91.0 best_domain_score:90.7 name:TIGR00114;
28468 27341 CDS
ID metaerg.pl|02847
allec_ids 4.1.99.12; 3.5.4.25;
allgo_ids GO:0008686; GO:0009231; GO:0005525; GO:0003935; GO:0000287; GO:0030145; GO:0008270;
allko_ids K14652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797825.1 1 374 evalue:3.2e-191 qcov:99.70 identity:90.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-6168; RIBOSYN2-PWY; PWY-6167;
metacyc_pathway_name flavin biosynthesis III (fungi);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis II (archaea);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00926; PF00925;
pfam_desc 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II;
pfam_id DHBP_synthase; GTP_cyclohydro2;
pfam_target db:Pfam-A.hmm|PF00926.19 evalue:4.5e-82 score:273.5 best_domain_score:272.8 name:DHBP_synthase; db:Pfam-A.hmm|PF00925.20 evalue:1.3e-27 score:95.6 best_domain_score:88.0 name:GTP_cyclohydro2;
sprot_desc Riboflavin biosynthesis protein RibBA;
sprot_id sp|Q0AXM5|RIBBA_SYNWW;
sprot_target db:uniprot_sprot|sp|Q0AXM5|RIBBA_SYNWW 18 363 evalue:1.3e-82 qcov:92.30 identity:45.00;
tigrfam_acc TIGR00506;
tigrfam_desc 3,4-dihydroxy-2-butanone-4-phosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribB;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00506 evalue:3.2e-71 score:238.2 best_domain_score:237.7 name:TIGR00506;
28650 29249 CDS
ID metaerg.pl|02848
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797824.1 1 199 evalue:3.1e-92 qcov:100.00 identity:81.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF05838; PF09374;
pfam_desc Glycosyl hydrolase 108; Predicted Peptidoglycan domain;
pfam_id Glyco_hydro_108; PG_binding_3;
pfam_target db:Pfam-A.hmm|PF05838.12 evalue:5.7e-27 score:93.2 best_domain_score:89.8 name:Glyco_hydro_108; db:Pfam-A.hmm|PF09374.10 evalue:1.4e-20 score:72.5 best_domain_score:71.8 name:PG_binding_3;
29246 29752 CDS
ID metaerg.pl|02849
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479168.1 1 165 evalue:5.9e-60 qcov:98.20 identity:74.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF11351;
pfam_desc Holin of 3TMs, for gene-transfer release;
pfam_id GTA_holin_3TM;
pfam_target db:Pfam-A.hmm|PF11351.8 evalue:4.8e-25 score:87.7 best_domain_score:86.8 name:GTA_holin_3TM;
30188 29859 CDS
ID metaerg.pl|02850
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479167.1 1 109 evalue:1.4e-46 qcov:100.00 identity:89.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF12616;
pfam_desc Protein of unknown function (DUF3775);
pfam_id DUF3775;
pfam_target db:Pfam-A.hmm|PF12616.8 evalue:1.5e-28 score:97.9 best_domain_score:97.4 name:DUF3775;
30981 30244 CDS
ID metaerg.pl|02851
allec_ids 1.-.-.-;
allgo_ids GO:0003824; GO:0050662; GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479166.1 1 243 evalue:3.0e-113 qcov:99.20 identity:83.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-5987; PWY-5479; PWY-5469; PWY-5826; PWY-2821; PWY-5271; PWY-4302;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sesamin biosynthesis;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; LIGNAN-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00106; PF13561; PF01370; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain;
pfam_id adh_short; adh_short_C2; Epimerase; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:8.6e-41 score:138.8 best_domain_score:138.5 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2e-29 score:102.0 best_domain_score:101.8 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:5.9e-06 score:25.1 best_domain_score:24.6 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:2.2e-10 score:40.0 best_domain_score:39.5 name:KR;
sprot_desc Oxidoreductase UcpA;
sprot_id sp|P0A2D2|UCPA_SALTI;
sprot_target db:uniprot_sprot|sp|P0A2D2|UCPA_SALTI 1 187 evalue:2.8e-17 qcov:76.30 identity:31.80;
31538 30978 CDS
ID metaerg.pl|02852
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468576.1 1 186 evalue:4.0e-78 qcov:100.00 identity:78.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF12915;
pfam_desc Protein of unknown function (DUF3833);
pfam_id DUF3833;
pfam_target db:Pfam-A.hmm|PF12915.7 evalue:4.8e-51 score:171.8 best_domain_score:171.6 name:DUF3833;
sp YES;
tm_num 1;
30978 31040 signal_peptide
ID metaerg.pl|02853
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
31538 30978 transmembrane_helix
ID metaerg.pl|02854
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology o30990-31058i;
32797 31541 CDS
ID metaerg.pl|02855
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479164.1 1 418 evalue:4.0e-174 qcov:100.00 identity:80.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF13347;
pfam_desc MFS/sugar transport protein;
pfam_id MFS_2;
pfam_target db:Pfam-A.hmm|PF13347.6 evalue:1.2e-49 score:168.3 best_domain_score:167.9 name:MFS_2;
tm_num 12;
32797 31541 transmembrane_helix
ID metaerg.pl|02856
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i31577-31636o31649-31717i31778-31846o31859-31927i31976-32044o32054-32122i32210-32278o32306-32365i32384-32452o32480-32548i32585-32653o32711-32779i;
33570 32800 CDS
ID metaerg.pl|02857
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468578.1 1 256 evalue:1.4e-113 qcov:100.00 identity:76.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF07103;
pfam_desc Protein of unknown function (DUF1365);
pfam_id DUF1365;
pfam_target db:Pfam-A.hmm|PF07103.11 evalue:3.3e-59 score:199.7 best_domain_score:199.5 name:DUF1365;
34865 33567 CDS
ID metaerg.pl|02858
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468579.1 1 432 evalue:9.0e-214 qcov:100.00 identity:81.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01593; PF01266; PF03486; PF13450; PF00070;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; DAO; HI0933_like; NAD_binding_8; Pyr_redox;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:9.6e-22 score:77.1 best_domain_score:75.8 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:1.6e-11 score:43.6 best_domain_score:39.1 name:DAO; db:Pfam-A.hmm|PF03486.14 evalue:3e-09 score:35.3 best_domain_score:23.1 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:3.7e-15 score:55.1 best_domain_score:53.8 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:4.7e-05 score:23.1 best_domain_score:12.7 name:Pyr_redox;
sp YES;
33567 33644 signal_peptide
ID metaerg.pl|02859
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
35007 35657 CDS
ID metaerg.pl|02860
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0003677; GO:0016987;
allko_ids K03088;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386113.1 31 216 evalue:6.1e-78 qcov:86.10 identity:80.10;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF04542; PF04545; PF08281;
pfam_desc Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF04542.14 evalue:5.6e-18 score:63.7 best_domain_score:62.5 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:6.2e-14 score:50.5 best_domain_score:49.8 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:2.9e-15 score:54.9 best_domain_score:54.0 name:Sigma70_r4_2;
sprot_desc ECF RNA polymerase sigma factor RpoE;
sprot_id sp|Q3IYV6|RPOE_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IYV6|RPOE_RHOS4 45 216 evalue:6.6e-63 qcov:79.60 identity:69.20;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:5.9e-28 score:96.7 best_domain_score:96.4 name:TIGR02937;
35665 36324 CDS
ID metaerg.pl|02861
allgo_ids GO:0003677; GO:0046872;
allko_ids K07167;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius atlanticus;
genomedb_acc GCF_001441615.1;
genomedb_target db:genomedb|GCF_001441615.1|WP_057791845.1 1 219 evalue:8.7e-80 qcov:100.00 identity:71.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF12973;
pfam_desc ChrR Cupin-like domain;
pfam_id Cupin_7;
pfam_target db:Pfam-A.hmm|PF12973.7 evalue:1.8e-13 score:49.5 best_domain_score:49.1 name:Cupin_7;
sprot_desc Anti-sigma-E factor ChrR;
sprot_id sp|P40685|CHRR_RHOS4;
sprot_target db:uniprot_sprot|sp|P40685|CHRR_RHOS4 5 219 evalue:1.5e-67 qcov:98.20 identity:60.00;
tigrfam_acc TIGR02451;
tigrfam_desc anti-sigma factor, putative, ChrR family;
tigrfam_mainrole Regulatory functions;
tigrfam_name anti_sig_ChrR;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02451 evalue:5.3e-66 score:221.7 best_domain_score:221.5 name:TIGR02451;
38015 36441 CDS
ID metaerg.pl|02862
allec_ids 3.5.1.126;
allgo_ids GO:0008233;
allko_ids K22602;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246308.1 1 524 evalue:8.9e-232 qcov:100.00 identity:75.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01019;
pfam_desc Gamma-glutamyltranspeptidase;
pfam_id G_glu_transpept;
pfam_target db:Pfam-A.hmm|PF01019.21 evalue:7e-133 score:443.3 best_domain_score:443.1 name:G_glu_transpept;
sprot_desc Oxamate amidohydrolase proenzyme;
sprot_id sp|A6T9C8|HPXW_KLEP7;
sprot_target db:uniprot_sprot|sp|A6T9C8|HPXW_KLEP7 10 524 evalue:9.7e-68 qcov:98.30 identity:36.00;
39345 38242 CDS
ID metaerg.pl|02863
allec_ids 2.1.1.72;
allgo_ids GO:0003677; GO:0006306; GO:0008170; GO:0009007; GO:0006260;
allko_ids K13581;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797814.1 1 365 evalue:3.2e-196 qcov:99.50 identity:90.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01555; PF18755;
pfam_desc DNA methylase; Restriction Enzyme Adenine Methylase Associated;
pfam_id N6_N4_Mtase; RAMA;
pfam_target db:Pfam-A.hmm|PF01555.18 evalue:1.6e-56 score:190.9 best_domain_score:190.5 name:N6_N4_Mtase; db:Pfam-A.hmm|PF18755.1 evalue:2.4e-19 score:69.0 best_domain_score:67.9 name:RAMA;
sprot_desc Modification methylase CcrMI;
sprot_id sp|P0CAW2|MTC1_CAUVC;
sprot_target db:uniprot_sprot|sp|P0CAW2|MTC1_CAUVC 16 365 evalue:2.5e-139 qcov:95.40 identity:66.20;
40087 39461 CDS
ID metaerg.pl|02864
allec_ids 3.1.26.4;
allgo_ids GO:0005737; GO:0030145; GO:0003723; GO:0004523; GO:0006401;
allko_ids K03470;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479160.1 6 207 evalue:1.4e-82 qcov:97.10 identity:76.70;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01351;
pfam_desc Ribonuclease HII;
pfam_id RNase_HII;
pfam_target db:Pfam-A.hmm|PF01351.18 evalue:2e-38 score:131.4 best_domain_score:131.2 name:RNase_HII;
sprot_desc Ribonuclease HII;
sprot_id sp|Q5LMW0|RNH2_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LMW0|RNH2_RUEPO 8 206 evalue:3.3e-59 qcov:95.70 identity:60.30;
40771 40145 CDS
ID metaerg.pl|02865
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797811.1 1 206 evalue:8.3e-48 qcov:99.00 identity:53.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
sp YES;
tm_num 2;
40145 40249 signal_peptide
ID metaerg.pl|02866
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
40771 40145 transmembrane_helix
ID metaerg.pl|02867
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i40178-40234o40262-40315i;
40864 41217 CDS
ID metaerg.pl|02868
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797810.1 21 116 evalue:7.2e-33 qcov:82.10 identity:77.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
sp YES;
tm_num 1;
40864 40989 signal_peptide
ID metaerg.pl|02869
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
40864 41217 transmembrane_helix
ID metaerg.pl|02870
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology o40933-41001i;
41189 41893 CDS
ID metaerg.pl|02871
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479157.1 1 234 evalue:1.9e-104 qcov:100.00 identity:91.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
tm_num 2;
41189 41893 transmembrane_helix
ID metaerg.pl|02872
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i41243-41311o41456-41524i;
41961 43406 CDS
ID metaerg.pl|02873
allec_ids 1.2.1.83;
allgo_ids GO:0016491; GO:0055114; GO:0016620; GO:0019608;
allko_ids K13821; K00318; K00128; K00294; K19700;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797808.1 1 481 evalue:3.5e-243 qcov:100.00 identity:86.30;
kegg_pathway_id 00071; 00340; 00631; 00410; 00251; 00310; 00010; 00280; 00650; 00640; 00330; 00620; 00903; 00220; 00561; 00120; 00380; 00641;
kegg_pathway_name Fatty acid metabolism; Histidine metabolism; 1,2-Dichloroethane degradation; beta-Alanine metabolism; Glutamate metabolism; Lysine degradation; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation; Butanoate metabolism; Propanoate metabolism; Arginine and proline metabolism; Pyruvate metabolism; Limonene and pinene degradation; Urea cycle and metabolism of amino groups; Glycerolipid metabolism; Bile acid biosynthesis; Tryptophan metabolism; 3-Chloroacrylic acid degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:6.6e-152 score:505.4 best_domain_score:505.3 name:Aldedh;
sprot_desc 3-succinoylsemialdehyde-pyridine dehydrogenase;
sprot_id sp|H8ZPX2|SAPD_PSESP;
sprot_target db:uniprot_sprot|sp|H8ZPX2|SAPD_PSESP 1 476 evalue:1.2e-133 qcov:99.00 identity:52.30;
43411 43794 CDS
ID metaerg.pl|02874
allgo_ids GO:0003824;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479370.1 1 124 evalue:2.7e-57 qcov:97.60 identity:82.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF11969; PF01230;
pfam_desc Scavenger mRNA decapping enzyme C-term binding; HIT domain;
pfam_id DcpS_C; HIT;
pfam_target db:Pfam-A.hmm|PF11969.8 evalue:4.7e-12 score:45.6 best_domain_score:45.3 name:DcpS_C; db:Pfam-A.hmm|PF01230.23 evalue:6.4e-21 score:74.2 best_domain_score:73.9 name:HIT;
sprot_desc Uncharacterized 13.2 kDa HIT-like protein in hisE 3'region;
sprot_id sp|P26724|YHIT_AZOBR;
sprot_target db:uniprot_sprot|sp|P26724|YHIT_AZOBR 1 123 evalue:2.6e-35 qcov:96.90 identity:56.10;
43831 43904 tRNA
ID metaerg.pl|02875
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
name tRNA_Cys_gca;
44415 43978 CDS
ID metaerg.pl|02876
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386412.1 1 144 evalue:1.7e-55 qcov:99.30 identity:75.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01475;
pfam_desc Ferric uptake regulator family;
pfam_id FUR;
pfam_target db:Pfam-A.hmm|PF01475.19 evalue:1.4e-14 score:53.5 best_domain_score:53.4 name:FUR;
44563 45072 CDS
ID metaerg.pl|02877
allec_ids 4.2.1.59;
allgo_ids GO:0005737; GO:0008659; GO:0008693; GO:0047451; GO:0034017; GO:0006633;
allko_ids K02372; K01716;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE46590.1 1 169 evalue:8.1e-94 qcov:100.00 identity:96.40;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-6282; PWY0-881; PWY-5989; BIOTIN-BIOSYNTHESIS-PWY; PWY-5972; PWY-6113; PWY-6285; PWY-6519; PWY-5971; PWY-5156;
metacyc_pathway_name palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate);; superpathway of fatty acid biosynthesis I (E. coli);; stearate biosynthesis II (bacteria and plants);; biotin biosynthesis I;; stearate biosynthesis I (animals and fungi);; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; 8-amino-7-oxononanoate biosynthesis I;; palmitate biosynthesis II (bacteria and plants);; superpathway of fatty acid biosynthesis II (plant);;
metacyc_pathway_type Palmitoleate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Stearate-Biosynthesis;; BIOTIN-SYN; Super-Pathways;; Stearate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; 7-Keto-8-aminopelargonate-Biosynthesis;; Palmitate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF07977;
pfam_desc FabA-like domain;
pfam_id FabA;
pfam_target db:Pfam-A.hmm|PF07977.13 evalue:2.2e-44 score:149.7 best_domain_score:149.4 name:FabA;
sprot_desc 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase;
sprot_id sp|B0T7B6|FABA_CAUSK;
sprot_target db:uniprot_sprot|sp|B0T7B6|FABA_CAUSK 6 166 evalue:3.7e-61 qcov:95.30 identity:67.70;
tigrfam_acc TIGR01749;
tigrfam_desc beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabA;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01749 evalue:2.2e-77 score:257.9 best_domain_score:257.7 name:TIGR01749;
47109 45085 CDS
ID metaerg.pl|02878
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797547.1 5 667 evalue:0.0e+00 qcov:98.40 identity:88.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:2.2e-82 score:276.3 best_domain_score:276.3 name:DctM;
tigrfam_acc TIGR02123;
tigrfam_desc TRAP transporter, 4TM/12TM fusion protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TRAP_fused;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR02123 evalue:3.4e-193 score:642.8 best_domain_score:642.6 name:TIGR02123;
tm_num 18;
47109 45085 transmembrane_helix
ID metaerg.pl|02879
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i45181-45249o45277-45330i45349-45417o45445-45501i45520-45588o45685-45753i45832-45900o46060-46128i46186-46254o46267-46335i46429-46497o46540-46608i46621-46689o46717-46770i46804-46872o46882-46950i46969-47022o47032-47085i;
47574 47113 CDS
ID metaerg.pl|02880
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_110549090.1 10 150 evalue:4.2e-41 qcov:92.20 identity:61.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF08905;
pfam_desc Domain of unknown function (DUF1850);
pfam_id DUF1850;
pfam_target db:Pfam-A.hmm|PF08905.11 evalue:3.1e-15 score:55.5 best_domain_score:54.5 name:DUF1850;
sp YES;
47113 47178 signal_peptide
ID metaerg.pl|02881
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
48530 47571 CDS
ID metaerg.pl|02882
allko_ids K07080;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797545.1 1 319 evalue:2.3e-142 qcov:100.00 identity:81.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF09084; PF16868; PF12974;
pfam_desc NMT1/THI5 like; NMT1-like family; ABC transporter, phosphonate, periplasmic substrate-binding protein;
pfam_id NMT1; NMT1_3; Phosphonate-bd;
pfam_target db:Pfam-A.hmm|PF09084.11 evalue:3e-11 score:42.9 best_domain_score:42.3 name:NMT1; db:Pfam-A.hmm|PF16868.5 evalue:5.3e-95 score:317.4 best_domain_score:317.2 name:NMT1_3; db:Pfam-A.hmm|PF12974.7 evalue:9e-10 score:37.8 best_domain_score:35.3 name:Phosphonate-bd;
sp YES;
sprot_desc 31 kDa immunogenic protein;
sprot_id sp|P0A3T3|BCSP_BRUAB;
sprot_target db:uniprot_sprot|sp|P0A3T3|BCSP_BRUAB 6 311 evalue:1.7e-38 qcov:95.90 identity:34.20;
tigrfam_acc TIGR02122;
tigrfam_desc TRAP transporter solute receptor, TAXI family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TRAP_TAXI;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR02122 evalue:1.6e-99 score:332.0 best_domain_score:331.8 name:TIGR02122;
47571 47633 signal_peptide
ID metaerg.pl|02883
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
49229 48633 CDS
ID metaerg.pl|02884
allgo_ids GO:0006865; GO:0016020; GO:0016021; GO:0005886;
allko_ids K11249;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072244386.1 1 198 evalue:4.3e-86 qcov:100.00 identity:82.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01810;
pfam_desc LysE type translocator;
pfam_id LysE;
pfam_target db:Pfam-A.hmm|PF01810.18 evalue:1.5e-14 score:53.2 best_domain_score:52.8 name:LysE;
sprot_desc Cysteine/O-acetylserine efflux protein;
sprot_id sp|A7ZQ23|EAMB_ECO24;
sprot_target db:uniprot_sprot|sp|A7ZQ23|EAMB_ECO24 1 194 evalue:2.8e-15 qcov:98.00 identity:31.50;
tm_num 4;
49229 48633 transmembrane_helix
ID metaerg.pl|02885
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology o48645-48713i48768-48836o49050-49118i49155-49223o;
49317 49769 CDS
ID metaerg.pl|02886
allgo_ids GO:0043565; GO:0003700;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072244701.1 1 150 evalue:3.4e-67 qcov:100.00 identity:86.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01037; PF13412; PF13404; PF09339; PF01047;
pfam_desc Lrp/AsnC ligand binding domain; Winged helix-turn-helix DNA-binding; AsnC-type helix-turn-helix domain; IclR helix-turn-helix domain; MarR family;
pfam_id AsnC_trans_reg; HTH_24; HTH_AsnC-type; HTH_IclR; MarR;
pfam_target db:Pfam-A.hmm|PF01037.21 evalue:6e-20 score:70.2 best_domain_score:69.7 name:AsnC_trans_reg; db:Pfam-A.hmm|PF13412.6 evalue:1.3e-17 score:62.3 best_domain_score:61.6 name:HTH_24; db:Pfam-A.hmm|PF13404.6 evalue:1.9e-15 score:55.6 best_domain_score:55.6 name:HTH_AsnC-type; db:Pfam-A.hmm|PF09339.10 evalue:2.8e-05 score:23.1 best_domain_score:22.3 name:HTH_IclR; db:Pfam-A.hmm|PF01047.22 evalue:7.1e-06 score:25.1 best_domain_score:24.0 name:MarR;
sprot_desc Leucine-responsive regulatory protein;
sprot_id sp|P56901|LRP_RHIME;
sprot_target db:uniprot_sprot|sp|P56901|LRP_RHIME 3 147 evalue:8.8e-22 qcov:96.70 identity:38.60;
49776 50474 CDS
ID metaerg.pl|02887
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797543.1 20 231 evalue:2.3e-91 qcov:91.40 identity:83.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF13614; PF01656; PF06564; PF09140; PF10609; PF07015;
pfam_desc AAA domain; CobQ/CobB/MinD/ParA nucleotide binding domain; Cellulose biosynthesis protein BcsQ; ATPase MipZ; NUBPL iron-transfer P-loop NTPase; VirC1 protein;
pfam_id AAA_31; CbiA; CBP_BcsQ; MipZ; ParA; VirC1;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:8.7e-21 score:73.9 best_domain_score:47.4 name:AAA_31; db:Pfam-A.hmm|PF01656.23 evalue:1.1e-13 score:50.6 best_domain_score:49.8 name:CbiA; db:Pfam-A.hmm|PF06564.12 evalue:5.1e-07 score:28.6 best_domain_score:19.2 name:CBP_BcsQ; db:Pfam-A.hmm|PF09140.11 evalue:4.2e-17 score:61.5 best_domain_score:52.5 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:5e-09 score:35.2 best_domain_score:30.6 name:ParA; db:Pfam-A.hmm|PF07015.11 evalue:2.7e-07 score:29.3 best_domain_score:28.9 name:VirC1;
50543 51886 CDS
ID metaerg.pl|02888
allec_ids 2.5.1.19;
allgo_ids GO:0016765; GO:0005737; GO:0003866; GO:0009073; GO:0009423;
allko_ids K00800; K04517; K13830; K00210; K00945; K03785; K00014; K01735; K00891;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470090.1 1 447 evalue:3.8e-215 qcov:100.00 identity:85.70;
kegg_pathway_id 00401; 00400; 00240;
kegg_pathway_name Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id ARO-PWY; PWY-6165; PWY-6163; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY;
metacyc_pathway_name chorismate biosynthesis I;; chorismate biosynthesis II (archaea);; chorismate biosynthesis from 3-dehydroquinate;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;;
metacyc_pathway_type Chorismate-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00275;
pfam_desc EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase);
pfam_id EPSP_synthase;
pfam_target db:Pfam-A.hmm|PF00275.20 evalue:1.6e-102 score:342.6 best_domain_score:342.4 name:EPSP_synthase;
sprot_desc 3-phosphoshikimate 1-carboxyvinyltransferase;
sprot_id sp|Q3IW89|AROA_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IW89|AROA_RHOS4 1 442 evalue:1.3e-201 qcov:98.90 identity:78.70;
tigrfam_acc TIGR01356;
tigrfam_desc 3-phosphoshikimate 1-carboxyvinyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name aroA;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01356 evalue:1.9e-122 score:408.2 best_domain_score:408.0 name:TIGR01356;
53512 51983 CDS
ID metaerg.pl|02889
allec_ids 2.4.1.213;
allgo_ids GO:0003824; GO:0005992; GO:0005737; GO:0005829; GO:0047260; GO:0033828; GO:0030145; GO:0006974; GO:0016311; GO:0051473; GO:0006970; GO:0070415; GO:0070413;
allko_ids K00697; K01087; K03692;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470475.1 1 509 evalue:2.4e-242 qcov:100.00 identity:81.70;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00982;
pfam_desc Glycosyltransferase family 20;
pfam_id Glyco_transf_20;
pfam_target db:Pfam-A.hmm|PF00982.21 evalue:9.9e-130 score:432.6 best_domain_score:432.4 name:Glyco_transf_20;
sprot_desc Glucosylglycerol-phosphate synthase;
sprot_id sp|P74258|GGPS_SYNY3;
sprot_target db:uniprot_sprot|sp|P74258|GGPS_SYNY3 1 480 evalue:4.5e-134 qcov:94.30 identity:49.00;
tigrfam_acc TIGR02398;
tigrfam_desc glucosylglycerol-phosphate synthase;
tigrfam_name gluc_glyc_Psyn;
tigrfam_target db:TIGRFAMs.hmm|TIGR02398 evalue:2.7e-181 score:602.6 best_domain_score:602.3 name:TIGR02398;
54291 53509 CDS
ID metaerg.pl|02890
allec_ids 2.4.1.213;
allgo_ids GO:0033828; GO:0051473; GO:0005992;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480360.1 1 257 evalue:2.7e-96 qcov:98.80 identity:70.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF08282; PF05116;
pfam_desc haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase;
pfam_id Hydrolase_3; S6PP;
pfam_target db:Pfam-A.hmm|PF08282.12 evalue:2.1e-16 score:59.7 best_domain_score:43.9 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:9e-43 score:145.8 best_domain_score:145.6 name:S6PP;
sprot_desc Glucosylglycerol-phosphate synthase;
sprot_id sp|Q93JY3|GGPS_PSEAG;
sprot_target db:uniprot_sprot|sp|Q93JY3|GGPS_PSEAG 16 252 evalue:2.6e-37 qcov:91.20 identity:39.40;
tigrfam_acc TIGR01484;
tigrfam_desc HAD hydrolase, family IIB;
tigrfam_mainrole Unknown function;
tigrfam_name HAD-SF-IIB;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01484 evalue:3.4e-14 score:52.6 best_domain_score:29.7 name:TIGR01484;
54642 54436 CDS
ID metaerg.pl|02891
allgo_ids GO:0003676; GO:0005737; GO:0003677;
allko_ids K03704;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072244567.1 1 68 evalue:2.6e-30 qcov:100.00 identity:98.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00313; PF08206;
pfam_desc 'Cold-shock' DNA-binding domain; Ribonuclease B OB domain;
pfam_id CSD; OB_RNB;
pfam_target db:Pfam-A.hmm|PF00313.22 evalue:1.3e-25 score:88.2 best_domain_score:88.0 name:CSD; db:Pfam-A.hmm|PF08206.11 evalue:1.2e-05 score:24.1 best_domain_score:23.6 name:OB_RNB;
sprot_desc Probable cold shock protein y4cH;
sprot_id sp|P55390|Y4CH_SINFN;
sprot_target db:uniprot_sprot|sp|P55390|Y4CH_SINFN 1 65 evalue:2.0e-21 qcov:95.60 identity:77.30;
55783 54806 CDS
ID metaerg.pl|02892
allec_ids 1.2.1.12;
allgo_ids GO:0016620; GO:0055114; GO:0005737; GO:0004365; GO:0051287; GO:0050661; GO:0006006; GO:0006096;
allko_ids K00134; K10705;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798003.1 1 325 evalue:2.0e-149 qcov:100.00 identity:83.10;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id GLYCOLYSIS; P461-PWY; PWY-5484; P122-PWY; GLYCOLYSIS-E-D; ANAGLYCOLYSIS-PWY; PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; P124-PWY; P185-PWY; PWY-1042; PWY-3801; ANAEROFRUCAT-PWY; GLUCONEO-PWY; P441-PWY;
metacyc_pathway_name glycolysis I (from glucose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; heterolactic fermentation;; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);; homolactic fermentation;; gluconeogenesis I;; superpathway of N-acetylneuraminate degradation;;
metacyc_pathway_type GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Fermentation-to-Lactate; Super-Pathways;; Gluconeogenesis;; CARBOXYLATES-DEG; Super-Pathways;;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:2.9e-40 score:136.7 best_domain_score:135.5 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:1.3e-25 score:88.9 best_domain_score:88.2 name:Gp_dh_N;
sprot_desc Glyceraldehyde-3-phosphate dehydrogenase;
sprot_id sp|P29272|G3P_RHOSH;
sprot_target db:uniprot_sprot|sp|P29272|G3P_RHOSH 1 325 evalue:7.1e-77 qcov:100.00 identity:47.00;
57002 56079 CDS
ID metaerg.pl|02893
allko_ids K16260; K00626;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796697.1 2 305 evalue:3.0e-147 qcov:99.00 identity:82.20;
kegg_pathway_id 00310; 00280; 00632; 00380; 02020; 00620; 00072; 00640; 00650; 00071;
kegg_pathway_name Lysine degradation; Valine, leucine and isoleucine degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Two-component system - General; Pyruvate metabolism; Synthesis and degradation of ketone bodies; Propanoate metabolism; Butanoate metabolism; Fatty acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF03364; PF10604;
pfam_desc Polyketide cyclase / dehydrase and lipid transport; Polyketide cyclase / dehydrase and lipid transport;
pfam_id Polyketide_cyc; Polyketide_cyc2;
pfam_target db:Pfam-A.hmm|PF03364.20 evalue:6.4e-08 score:32.1 best_domain_score:26.2 name:Polyketide_cyc; db:Pfam-A.hmm|PF10604.9 evalue:8.4e-38 score:129.1 best_domain_score:77.9 name:Polyketide_cyc2;
57853 57008 CDS
ID metaerg.pl|02894
allgo_ids GO:0003824;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796698.1 1 281 evalue:2.0e-145 qcov:100.00 identity:92.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF09370;
pfam_desc Phosphoenolpyruvate hydrolase-like;
pfam_id PEP_hydrolase;
pfam_target db:Pfam-A.hmm|PF09370.10 evalue:1.3e-126 score:420.5 best_domain_score:420.3 name:PEP_hydrolase;
sprot_desc hypothetical protein;
sprot_id sp|P55607|Y4OV_SINFN;
sprot_target db:uniprot_sprot|sp|P55607|Y4OV_SINFN 11 279 evalue:2.5e-102 qcov:95.70 identity:69.90;
59052 57850 CDS
ID metaerg.pl|02895
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796699.1 1 400 evalue:3.7e-185 qcov:100.00 identity:82.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF06792;
pfam_desc Uncharacterised protein family (UPF0261);
pfam_id UPF0261;
pfam_target db:Pfam-A.hmm|PF06792.11 evalue:1.4e-147 score:491.1 best_domain_score:490.9 name:UPF0261;
sprot_desc hypothetical protein;
sprot_id sp|A4FLF6|Y5696_SACEN;
sprot_target db:uniprot_sprot|sp|A4FLF6|Y5696_SACEN 4 399 evalue:6.2e-115 qcov:99.00 identity:56.20;
59749 59042 CDS
ID metaerg.pl|02896
allgo_ids GO:0005524; GO:0016887; GO:0015658;
allko_ids K06861; K01996; K02045; K02052; K02006; K02017; K02023; K11962; K10111; K01998; K01995;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796700.1 1 235 evalue:7.3e-109 qcov:100.00 identity:87.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:2.8e-22 score:78.9 best_domain_score:78.4 name:ABC_tran;
sprot_desc High-affinity branched-chain amino acid transport ATP-binding protein LivF;
sprot_id sp|P0A192|LIVF_SALTI;
sprot_target db:uniprot_sprot|sp|P0A192|LIVF_SALTI 5 230 evalue:3.7e-35 qcov:96.20 identity:37.70;
60204 59749 CDS
ID metaerg.pl|02897
allgo_ids GO:0005524; GO:0016887;
allko_ids K02006; K06861; K01996; K02045; K01995;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796865.1 44 151 evalue:7.4e-46 qcov:71.50 identity:92.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:5.7e-06 score:26.1 best_domain_score:25.6 name:ABC_tran;
61204 60644 CDS
ID metaerg.pl|02898
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796701.1 1 176 evalue:5.1e-81 qcov:94.60 identity:89.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF13433; PF13458;
pfam_desc Periplasmic binding protein domain; Periplasmic binding protein;
pfam_id Peripla_BP_5; Peripla_BP_6;
pfam_target db:Pfam-A.hmm|PF13433.6 evalue:5.1e-06 score:24.9 best_domain_score:24.3 name:Peripla_BP_5; db:Pfam-A.hmm|PF13458.6 evalue:8.9e-25 score:87.3 best_domain_score:86.8 name:Peripla_BP_6;
sp YES;
60644 60724 signal_peptide
ID metaerg.pl|02899
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
62317 61310 CDS
ID metaerg.pl|02900
allgo_ids GO:0016020; GO:0022857; GO:0055085;
allko_ids K02057; K01995; K01998;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796866.1 4 333 evalue:9.0e-153 qcov:98.50 identity:87.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:2.4e-35 score:121.3 best_domain_score:121.3 name:BPD_transp_2;
tm_num 9;
62317 61310 transmembrane_helix
ID metaerg.pl|02901
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i61343-61411o61421-61489i61502-61570o61580-61648i61661-61729o61799-61867i61961-62029o62072-62140i62177-62245o;
63207 62314 CDS
ID metaerg.pl|02902
allgo_ids GO:0016020; GO:0022857; GO:0055085;
allko_ids K01998; K01995; K01997; K02057;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796702.1 1 297 evalue:1.3e-142 qcov:100.00 identity:91.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:2.2e-33 score:114.8 best_domain_score:114.6 name:BPD_transp_2;
tm_num 8;
63207 62314 transmembrane_helix
ID metaerg.pl|02903
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology o62341-62409i62428-62496o62524-62592i62626-62694o62752-62820i62896-62964o63022-63090i63109-63177o;
63346 64068 CDS
ID metaerg.pl|02904
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796703.1 1 239 evalue:5.2e-62 qcov:99.60 identity:57.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF09370;
pfam_desc Phosphoenolpyruvate hydrolase-like;
pfam_id PEP_hydrolase;
pfam_target db:Pfam-A.hmm|PF09370.10 evalue:6.1e-17 score:60.9 best_domain_score:60.7 name:PEP_hydrolase;
64121 65857 CDS
ID metaerg.pl|02905
allgo_ids GO:0043565; GO:0005524; GO:0003824; GO:0008134; GO:0000160; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796704.1 1 578 evalue:7.0e-254 qcov:100.00 identity:78.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF02954; PF09370; PF00158; PF14532;
pfam_desc Bacterial regulatory protein, Fis family; Phosphoenolpyruvate hydrolase-like; Sigma-54 interaction domain; Sigma-54 interaction domain;
pfam_id HTH_8; PEP_hydrolase; Sigma54_activat; Sigma54_activ_2;
pfam_target db:Pfam-A.hmm|PF02954.19 evalue:7.2e-11 score:40.9 best_domain_score:38.9 name:HTH_8; db:Pfam-A.hmm|PF09370.10 evalue:1e-76 score:256.9 best_domain_score:256.6 name:PEP_hydrolase; db:Pfam-A.hmm|PF00158.26 evalue:1.4e-07 score:30.6 best_domain_score:28.1 name:Sigma54_activat; db:Pfam-A.hmm|PF14532.6 evalue:2e-09 score:36.9 best_domain_score:36.0 name:Sigma54_activ_2;
sp YES;
sprot_desc Putative transcriptional regulatory protein y4pA;
sprot_id sp|P55610|Y4PA_SINFN;
sprot_target db:uniprot_sprot|sp|P55610|Y4PA_SINFN 14 576 evalue:3.1e-107 qcov:97.40 identity:41.70;
tm_num 1;
64121 64207 signal_peptide
ID metaerg.pl|02906
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
64121 65857 transmembrane_helix
ID metaerg.pl|02907
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i64157-64225o;
67759 66017 CDS
ID metaerg.pl|02908
allgo_ids GO:0016020; GO:0055085;
allko_ids K02011;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_083204775.1 26 580 evalue:1.6e-221 qcov:95.70 identity:71.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:5.9e-22 score:77.5 best_domain_score:57.2 name:BPD_transp_1;
tm_num 12;
67759 66017 transmembrane_helix
ID metaerg.pl|02909
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i66164-66232o66299-66367i66386-66454o66554-66622i66680-66748o66842-66901i66986-67054o67112-67180i67238-67306o67334-67402i67544-67612o67682-67741i;
67871 68881 CDS
ID metaerg.pl|02910
allgo_ids GO:0005886; GO:0042651; GO:0046872; GO:0006811; GO:0055072;
allko_ids K02012;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_082700158.1 1 336 evalue:6.9e-145 qcov:100.00 identity:72.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01547; PF13531; PF13343; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_11; SBP_bac_6; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:5.5e-19 score:68.5 best_domain_score:66.8 name:SBP_bac_1; db:Pfam-A.hmm|PF13531.6 evalue:4.2e-16 score:58.6 best_domain_score:57.9 name:SBP_bac_11; db:Pfam-A.hmm|PF13343.6 evalue:6.3e-23 score:80.7 best_domain_score:80.2 name:SBP_bac_6; db:Pfam-A.hmm|PF13416.6 evalue:6.2e-19 score:68.1 best_domain_score:67.7 name:SBP_bac_8;
sp YES;
sprot_desc Iron uptake protein A1;
sprot_id sp|P72827|FUTA1_SYNY3;
sprot_target db:uniprot_sprot|sp|P72827|FUTA1_SYNY3 17 335 evalue:1.1e-85 qcov:94.90 identity:50.20;
67871 67930 signal_peptide
ID metaerg.pl|02911
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
69105 70235 CDS
ID metaerg.pl|02912
allec_ids 7.3.2.3;
allgo_ids GO:0005524; GO:0016887; GO:0043190; GO:0015419; GO:0102025;
allko_ids K02003; K01997; K05847; K02056; K02010; K02052; K02006; K02004; K11084; K02017; K02032; K01996; K06861; K02071; K10199; K10441; K02062; K02028; K11072; K02045; K02068; K01995; K02065; K02049; K02031; K10562; K10545; K01998; K10111; K10112; K05816; K06857; K10235; K02013; K02193; K11076; K01990; K10243; K09812; K02018; K02023; K10000; K11080; K10230; K02000; K11962;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468240.1 26 358 evalue:9.2e-138 qcov:88.60 identity:75.40;
kegg_pathway_id 00910; 02010;
kegg_pathway_name Nitrogen metabolism; ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00005; PF08402;
pfam_desc ABC transporter; TOBE domain;
pfam_id ABC_tran; TOBE_2;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.4e-34 score:118.8 best_domain_score:117.9 name:ABC_tran; db:Pfam-A.hmm|PF08402.10 evalue:2.7e-07 score:29.9 best_domain_score:27.6 name:TOBE_2;
sprot_desc Sulfate/thiosulfate import ATP-binding protein CysA 2;
sprot_id sp|Q7NWX3|CYSA2_CHRVO;
sprot_target db:uniprot_sprot|sp|Q7NWX3|CYSA2_CHRVO 18 300 evalue:9.1e-68 qcov:75.30 identity:48.80;
70356 70538 CDS
ID metaerg.pl|02913
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795169.1 1 60 evalue:2.7e-23 qcov:100.00 identity:93.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF10636;
pfam_desc Hemin uptake protein hemP;
pfam_id hemP;
pfam_target db:Pfam-A.hmm|PF10636.9 evalue:1.8e-15 score:55.7 best_domain_score:55.3 name:hemP;
71313 70843 CDS
ID metaerg.pl|02914
allgo_ids GO:0006879; GO:0008199;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795171.1 1 156 evalue:1.4e-68 qcov:100.00 identity:87.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00210;
pfam_desc Ferritin-like domain;
pfam_id Ferritin;
pfam_target db:Pfam-A.hmm|PF00210.24 evalue:1.8e-18 score:66.1 best_domain_score:65.9 name:Ferritin;
71778 71431 CDS
ID metaerg.pl|02915
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795172.1 1 112 evalue:6.9e-44 qcov:97.40 identity:80.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
72829 72578 CDS
ID metaerg.pl|02916
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797172.1 1 77 evalue:1.1e-30 qcov:92.80 identity:94.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF04380;
pfam_desc Membrane fusogenic activity;
pfam_id BMFP;
pfam_target db:Pfam-A.hmm|PF04380.13 evalue:4e-27 score:93.7 best_domain_score:93.6 name:BMFP;
72865 73845 CDS
ID metaerg.pl|02917
allec_ids 2.5.1.145; 2.4.99.-;
allgo_ids GO:0016020; GO:0016757; GO:0042158; GO:0005887; GO:0008961;
allko_ids K13292;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797171.1 30 324 evalue:2.0e-144 qcov:90.50 identity:82.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-6467;
metacyc_pathway_name Kdo transfer to lipid IVA III (Chlamydia);;
metacyc_pathway_type KDO-Lipid-IV-Transfer; Super-Pathways;;
pfam_acc PF01790;
pfam_desc Prolipoprotein diacylglyceryl transferase;
pfam_id LGT;
pfam_target db:Pfam-A.hmm|PF01790.18 evalue:9.6e-75 score:250.2 best_domain_score:249.9 name:LGT;
sprot_desc Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase;
sprot_id sp|A4WP56|LGT_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WP56|LGT_RHOS5 35 326 evalue:2.4e-104 qcov:89.60 identity:63.00;
tigrfam_acc TIGR00544;
tigrfam_desc prolipoprotein diacylglyceryl transferase;
tigrfam_mainrole Protein fate;
tigrfam_name lgt;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00544 evalue:1.4e-68 score:230.5 best_domain_score:230.2 name:TIGR00544;
tm_num 5;
72865 73845 transmembrane_helix
ID metaerg.pl|02918
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology o73021-73089i73150-73218o73261-73329i73615-73683o73759-73827i;
73842 74906 CDS
ID metaerg.pl|02919
allec_ids 2.1.1.320;
allgo_ids GO:0005739; GO:0019899; GO:0035243; GO:0032981; GO:0019918;
allko_ids K18164;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469733.1 1 353 evalue:3.6e-144 qcov:99.70 identity:73.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF02636;
pfam_desc Putative S-adenosyl-L-methionine-dependent methyltransferase;
pfam_id Methyltransf_28;
pfam_target db:Pfam-A.hmm|PF02636.17 evalue:2.7e-64 score:216.5 best_domain_score:216.2 name:Methyltransf_28;
sprot_desc hypothetical protein;
sprot_id sp|Q9CWG8|NDUF7_MOUSE;
sprot_target db:uniprot_sprot|sp|Q9CWG8|NDUF7_MOUSE 1 345 evalue:1.1e-51 qcov:97.50 identity:37.20;
74903 75667 CDS
ID metaerg.pl|02920
allec_ids 1.10.3.-;
allgo_ids GO:0005507; GO:0016491;
allko_ids K05810;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797169.1 1 254 evalue:1.8e-108 qcov:100.00 identity:78.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-5476; PWY-5404; PWY-5405; PWY-5466; PWY-5787; PWY-5439;
metacyc_pathway_name cornusiin E biosynthesis;; betaxanthin biosynthesis (via dopaxanthin);; superpathway of betalain biosynthesis;; matairesinol biosynthesis;; oligomeric urushiol biosynthesis;; betacyanin biosynthesis (via dopamine);;
metacyc_pathway_type ELLAGITANNINS;; BETALAIN-ALKALOIDS;; BETALAIN-ALKALOIDS; Super-Pathways;; LIGNAN-SYN;; AROMATIC-COMPOUNDS-BIOSYN;; BETALAIN-ALKALOIDS;;
pfam_acc PF02578;
pfam_desc Multi-copper polyphenol oxidoreductase laccase;
pfam_id Cu-oxidase_4;
pfam_target db:Pfam-A.hmm|PF02578.15 evalue:5.4e-70 score:234.8 best_domain_score:234.6 name:Cu-oxidase_4;
sp YES;
sprot_desc Polyphenol oxidase;
sprot_id sp|Q9RT03|POLOX_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RT03|POLOX_DEIRA 3 254 evalue:3.1e-35 qcov:99.20 identity:39.70;
tigrfam_acc TIGR00726;
tigrfam_desc YfiH family protein;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00726;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00726 evalue:3.2e-51 score:173.0 best_domain_score:172.7 name:TIGR00726;
74903 75031 signal_peptide
ID metaerg.pl|02921
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
76518 76039 CDS
ID metaerg.pl|02922
allgo_ids GO:0005737; GO:0050821;
allko_ids K04080;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797184.1 1 155 evalue:2.8e-64 qcov:97.50 identity:81.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00011;
pfam_desc Hsp20/alpha crystallin family;
pfam_id HSP20;
pfam_target db:Pfam-A.hmm|PF00011.21 evalue:2.5e-19 score:68.6 best_domain_score:68.1 name:HSP20;
sprot_desc Small heat shock protein IbpA;
sprot_id sp|Q57I24|IBPA_SALCH;
sprot_target db:uniprot_sprot|sp|Q57I24|IBPA_SALCH 1 139 evalue:1.4e-33 qcov:87.40 identity:51.80;
77536 76712 CDS
ID metaerg.pl|02923
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797168.1 1 274 evalue:6.3e-104 qcov:100.00 identity:70.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00089; PF13365;
pfam_desc Trypsin; Trypsin-like peptidase domain;
pfam_id Trypsin; Trypsin_2;
pfam_target db:Pfam-A.hmm|PF00089.26 evalue:1.9e-13 score:50.0 best_domain_score:49.0 name:Trypsin; db:Pfam-A.hmm|PF13365.6 evalue:6.6e-15 score:55.5 best_domain_score:54.6 name:Trypsin_2;
sp YES;
76712 76768 signal_peptide
ID metaerg.pl|02924
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
78937 77630 CDS
ID metaerg.pl|02925
allgo_ids GO:0051539; GO:0019154; GO:0046872; GO:0046296;
allko_ids K00122; K11260; K00245; K00235; K00873; K00204; K00246; K00240; K00123; K00443; K03390; K08264; K00176; K05588; K03388; K00172; K00124; K00533; K00436; K11181; K00265; K00335; K00226; K00125; K00441; K00171; K00205; K11473;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246514.1 1 426 evalue:1.1e-224 qcov:97.90 identity:88.50;
kegg_pathway_id 00251; 00633; 02020; 00910; 00190; 00130; 00680; 00710; 00010; 00020; 00230; 00620; 05012; 00630; 00650; 00640; 00790; 00720; 00240; 00632;
kegg_pathway_name Glutamate metabolism; Trinitrotoluene degradation; Two-component system - General; Nitrogen metabolism; Oxidative phosphorylation; Ubiquinone biosynthesis; Methane metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Purine metabolism; Pyruvate metabolism; Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Butanoate metabolism; Propanoate metabolism; Folate biosynthesis; Reductive carboxylate cycle (CO2 fixation); Pyrimidine metabolism; Benzoate degradation via CoA ligation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF02754; PF00037; PF13237; PF13484; PF13534; PF12800; PF12837; PF12838; PF13183; PF13187;
pfam_desc Cysteine-rich domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S double cluster binding domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id CCG; Fer4; Fer4_10; Fer4_16; Fer4_17; Fer4_4; Fer4_6; Fer4_7; Fer4_8; Fer4_9;
pfam_target db:Pfam-A.hmm|PF02754.16 evalue:1.5e-27 score:94.8 best_domain_score:50.9 name:CCG; db:Pfam-A.hmm|PF00037.27 evalue:5.6e-07 score:28.4 best_domain_score:18.0 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:5.6e-08 score:32.0 best_domain_score:29.9 name:Fer4_10; db:Pfam-A.hmm|PF13484.6 evalue:9e-09 score:35.4 best_domain_score:34.2 name:Fer4_16; db:Pfam-A.hmm|PF13534.6 evalue:9.8e-10 score:38.1 best_domain_score:38.1 name:Fer4_17; db:Pfam-A.hmm|PF12800.7 evalue:8.6e-06 score:25.1 best_domain_score:18.1 name:Fer4_4; db:Pfam-A.hmm|PF12837.7 evalue:7.6e-07 score:28.2 best_domain_score:17.3 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:3e-13 score:49.4 best_domain_score:48.2 name:Fer4_7; db:Pfam-A.hmm|PF13183.6 evalue:1.2e-10 score:40.9 best_domain_score:39.7 name:Fer4_8; db:Pfam-A.hmm|PF13187.6 evalue:3.1e-07 score:29.7 best_domain_score:15.7 name:Fer4_9;
sprot_desc Glycolate oxidase iron-sulfur subunit;
sprot_id sp|P52074|GLCF_ECOLI;
sprot_target db:uniprot_sprot|sp|P52074|GLCF_ECOLI 1 417 evalue:4.0e-91 qcov:95.90 identity:42.70;
80045 78945 CDS
ID metaerg.pl|02926
allgo_ids GO:0016491; GO:0050660; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797166.1 1 366 evalue:8.6e-157 qcov:100.00 identity:76.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01565;
pfam_desc FAD binding domain;
pfam_id FAD_binding_4;
pfam_target db:Pfam-A.hmm|PF01565.23 evalue:2.8e-20 score:71.7 best_domain_score:70.7 name:FAD_binding_4;
81561 80128 CDS
ID metaerg.pl|02927
allgo_ids GO:0003824; GO:0050660; GO:0009339; GO:0071949; GO:0008891;
allko_ids K00075; K00004; K03777; K00102; K00104;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469728.1 1 477 evalue:1.5e-246 qcov:100.00 identity:88.30;
kegg_pathway_id 00630; 00530; 00650; 00620;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Aminosugars metabolism; Butanoate metabolism; Pyruvate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF02913; PF01565;
pfam_desc FAD linked oxidases, C-terminal domain; FAD binding domain;
pfam_id FAD-oxidase_C; FAD_binding_4;
pfam_target db:Pfam-A.hmm|PF02913.19 evalue:5.7e-59 score:199.0 best_domain_score:198.6 name:FAD-oxidase_C; db:Pfam-A.hmm|PF01565.23 evalue:3.6e-35 score:120.0 best_domain_score:119.4 name:FAD_binding_4;
sprot_desc Glycolate oxidase subunit GlcD;
sprot_id sp|P0AEQ0|GLCD_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AEQ0|GLCD_ECOL6 14 467 evalue:4.3e-123 qcov:95.20 identity:48.50;
82295 81708 CDS
ID metaerg.pl|02928
allec_ids 2.5.1.18;
allgo_ids GO:0005515; GO:0005737; GO:0004364;
allko_ids K00799; K04097;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas rosea;
genomedb_acc GCF_000429045.1;
genomedb_target db:genomedb|GCF_000429045.1|WP_029030812.1 1 195 evalue:8.3e-74 qcov:100.00 identity:67.70;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-4061;
metacyc_pathway_name glutathione-mediated detoxification I;;
metacyc_pathway_type Detoxification; Other-Degradation;;
pfam_acc PF00043; PF14497; PF02798; PF13409; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_3; GST_N; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:1.3e-07 score:30.9 best_domain_score:30.2 name:GST_C; db:Pfam-A.hmm|PF14497.6 evalue:7.4e-05 score:22.1 best_domain_score:21.7 name:GST_C_3; db:Pfam-A.hmm|PF02798.20 evalue:1.4e-12 score:47.0 best_domain_score:45.9 name:GST_N; db:Pfam-A.hmm|PF13409.6 evalue:2.1e-06 score:27.2 best_domain_score:26.1 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:1.7e-12 score:46.8 best_domain_score:45.8 name:GST_N_3;
sprot_desc Glutathione S-transferase GST-6.0;
sprot_id sp|P15214|GST_PROMI;
sprot_target db:uniprot_sprot|sp|P15214|GST_PROMI 2 195 evalue:5.5e-08 qcov:99.50 identity:26.90;
83509 82568 CDS
ID metaerg.pl|02929
allgo_ids GO:0016020; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469923.1 14 309 evalue:1.6e-132 qcov:94.60 identity:86.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:6.1e-14 score:51.6 best_domain_score:41.1 name:EamA;
sprot_desc hypothetical protein;
sprot_id sp|P29370|Y1977_PSEAE;
sprot_target db:uniprot_sprot|sp|P29370|Y1977_PSEAE 24 306 evalue:2.5e-58 qcov:90.40 identity:53.00;
tm_num 10;
83509 82568 transmembrane_helix
ID metaerg.pl|02930
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i82616-82684o82727-82783i82802-82870o82883-82951i82970-83038o83051-83110i83147-83215o83228-83296i83315-83377o83387-83455i;
85805 83955 CDS
ID metaerg.pl|02931
allec_ids 2.4.1.25;
allgo_ids GO:0004134; GO:0005975; GO:0005737; GO:0102500;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068300166.1 1 612 evalue:1.3e-181 qcov:99.40 identity:55.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-5941; PWY-5767; GLYCOCAT-PWY; PWY-842;
metacyc_pathway_name glycogen degradation II;; ; glycogen degradation I;; starch degradation I;;
metacyc_pathway_type Glycan-Degradation; Glycogen-Degradation;; ; Glycan-Degradation; Glycogen-Degradation;; Glycan-Degradation; Starch-Degradation;;
pfam_acc PF02446;
pfam_desc 4-alpha-glucanotransferase;
pfam_id Glyco_hydro_77;
pfam_target db:Pfam-A.hmm|PF02446.17 evalue:1.4e-93 score:313.5 best_domain_score:313.1 name:Glyco_hydro_77;
sprot_desc 4-alpha-glucanotransferase;
sprot_id sp|P65337|MALQ_MYCBO;
sprot_target db:uniprot_sprot|sp|P65337|MALQ_MYCBO 94 602 evalue:2.8e-74 qcov:82.60 identity:33.80;
tigrfam_acc TIGR00217;
tigrfam_desc 4-alpha-glucanotransferase;
tigrfam_mainrole Energy metabolism;
tigrfam_name malQ;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00217 evalue:2.1e-73 score:247.2 best_domain_score:219.2 name:TIGR00217;
87891 85816 CDS
ID metaerg.pl|02932
allec_ids 3.2.1.-;
allgo_ids GO:0003824; GO:0005975; GO:0004133; GO:0004553; GO:0005980;
allko_ids K01236; K01176; K01200; K00700;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105320115.1 14 690 evalue:4.0e-248 qcov:98.00 identity:63.90;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id SUCROSEUTIL2-PWY; PWY-862; PWY-5976; PWY-5825; PWY-5821;
metacyc_pathway_name sucrose degradation VII (sucrose 3-dehydrogenase);; fructan degradation;; dhurrin degradation;; dalpatein and dalnigrein biosynthesis;; dalcochinin biosynthesis;;
metacyc_pathway_type SUCROSE-DEG;; Glycan-Pathways; POLYSACCHARIDES-DEG;; CYANOGENIC-GLUCOSIDE-DEG;; ISOFLAVONOID-SYN;; ISOFLAVONOID-SYN;;
pfam_acc PF00128; PF02922;
pfam_desc Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain);
pfam_id Alpha-amylase; CBM_48;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:4.4e-15 score:55.3 best_domain_score:30.0 name:Alpha-amylase; db:Pfam-A.hmm|PF02922.18 evalue:1.7e-16 score:59.6 best_domain_score:56.8 name:CBM_48;
sprot_desc Glycogen operon protein GlgX homolog;
sprot_id sp|P0A4Y5|GLGX_MYCBO;
sprot_target db:uniprot_sprot|sp|P0A4Y5|GLGX_MYCBO 14 667 evalue:1.3e-157 qcov:94.60 identity:44.80;
tigrfam_acc TIGR02100;
tigrfam_desc glycogen debranching enzyme GlgX;
tigrfam_mainrole Energy metabolism;
tigrfam_name glgX_debranch;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02100 evalue:6.9e-264 score:876.2 best_domain_score:876.0 name:TIGR02100;
89367 87940 CDS
ID metaerg.pl|02933
allec_ids 2.4.1.21;
allgo_ids GO:0033201; GO:0004373; GO:0009011; GO:0005978;
allko_ids K00703;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105320116.1 1 472 evalue:1.1e-185 qcov:99.40 identity:68.60;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-622; GLYCOGENSYNTH-PWY;
metacyc_pathway_name starch biosynthesis;; glycogen biosynthesis I (from ADP-D-Glucose);;
metacyc_pathway_type GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;;
pfam_acc PF00534; PF08323; PF13692;
pfam_desc Glycosyl transferases group 1; Starch synthase catalytic domain; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_transf_5; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:4.5e-11 score:41.8 best_domain_score:41.2 name:Glycos_transf_1; db:Pfam-A.hmm|PF08323.11 evalue:7.6e-64 score:215.0 best_domain_score:214.0 name:Glyco_transf_5; db:Pfam-A.hmm|PF13692.6 evalue:1.4e-09 score:37.7 best_domain_score:36.9 name:Glyco_trans_1_4;
sprot_desc Glycogen synthase;
sprot_id sp|A1BAE6|GLGA_PARDP;
sprot_target db:uniprot_sprot|sp|A1BAE6|GLGA_PARDP 1 472 evalue:1.9e-158 qcov:99.40 identity:60.70;
tigrfam_acc TIGR02095;
tigrfam_desc glycogen/starch synthase, ADP-glucose type;
tigrfam_mainrole Energy metabolism;
tigrfam_name glgA;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02095 evalue:2.1e-145 score:484.2 best_domain_score:483.9 name:TIGR02095;
90649 89384 CDS
ID metaerg.pl|02934
allec_ids 2.7.7.27;
allgo_ids GO:0009058; GO:0016779; GO:0005524; GO:0008878; GO:0005978;
allko_ids K00975; K00677; K04042; K02536; K01840; K00966; K11528; K00972;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105320117.1 1 419 evalue:2.6e-210 qcov:99.50 identity:82.80;
kegg_pathway_id 00540; 00500; 00530; 00051;
kegg_pathway_name Lipopolysaccharide biosynthesis; Starch and sucrose metabolism; Aminosugars metabolism; Fructose and mannose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-622; GLYCOGENSYNTH-PWY;
metacyc_pathway_name starch biosynthesis;; glycogen biosynthesis I (from ADP-D-Glucose);;
metacyc_pathway_type GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;;
pfam_acc PF00483; PF12804;
pfam_desc Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF00483.23 evalue:2.7e-63 score:213.1 best_domain_score:212.7 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:2.6e-08 score:33.6 best_domain_score:32.5 name:NTP_transf_3;
sprot_desc Glucose-1-phosphate adenylyltransferase;
sprot_id sp|Q28MN1|GLGC_JANSC;
sprot_target db:uniprot_sprot|sp|Q28MN1|GLGC_JANSC 6 421 evalue:2.9e-187 qcov:98.80 identity:75.50;
tigrfam_acc TIGR02091;
tigrfam_desc glucose-1-phosphate adenylyltransferase;
tigrfam_mainrole Energy metabolism;
tigrfam_name glgC;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02091 evalue:5.9e-147 score:488.6 best_domain_score:488.4 name:TIGR02091;
92736 90649 CDS
ID metaerg.pl|02935
allec_ids 2.4.1.18;
allgo_ids GO:0003824; GO:0005975; GO:0003844; GO:0102752; GO:0043169; GO:0004553; GO:0005978;
allko_ids K01176; K01236; K00700; K01200;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodovulum;s__Rhodovulum sulfidophilum;
genomedb_acc GCF_001633165.1;
genomedb_target db:genomedb|GCF_001633165.1|WP_072071696.1 2 691 evalue:0.0e+00 qcov:99.30 identity:75.40;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id GLYCOGENSYNTH-PWY; PWY-5067; PWY-622;
metacyc_pathway_name glycogen biosynthesis I (from ADP-D-Glucose);; glycogen biosynthesis II (from UDP-D-Glucose);; starch biosynthesis;;
metacyc_pathway_type GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;;
pfam_acc PF00128; PF02806; PF02922;
pfam_desc Alpha amylase, catalytic domain; Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain);
pfam_id Alpha-amylase; Alpha-amylase_C; CBM_48;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:6.7e-07 score:28.4 best_domain_score:16.2 name:Alpha-amylase; db:Pfam-A.hmm|PF02806.18 evalue:5.6e-21 score:74.1 best_domain_score:73.2 name:Alpha-amylase_C; db:Pfam-A.hmm|PF02922.18 evalue:8.9e-22 score:76.5 best_domain_score:75.6 name:CBM_48;
sprot_desc 1,4-alpha-glucan branching enzyme GlgB;
sprot_id sp|Q165E2|GLGB_ROSDO;
sprot_target db:uniprot_sprot|sp|Q165E2|GLGB_ROSDO 27 693 evalue:7.1e-284 qcov:96.00 identity:66.60;
tigrfam_acc TIGR01515;
tigrfam_desc 1,4-alpha-glucan branching enzyme;
tigrfam_mainrole Energy metabolism;
tigrfam_name branching_enzym;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01515 evalue:9.2e-275 score:912.1 best_domain_score:911.9 name:TIGR01515;
95343 92944 CDS
ID metaerg.pl|02936
allec_ids 2.4.1.1;
allgo_ids GO:0005975; GO:0008184; GO:0102250; GO:0030170; GO:0102499; GO:0016052; GO:0005980;
allko_ids K00688;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092888241.1 3 785 evalue:0.0e+00 qcov:98.00 identity:70.90;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-5941; GLYCOCAT-PWY; PWY-5767; PWY-842;
metacyc_pathway_name glycogen degradation II;; glycogen degradation I;; ; starch degradation I;;
metacyc_pathway_type Glycan-Degradation; Glycogen-Degradation;; Glycan-Degradation; Glycogen-Degradation;; ; Glycan-Degradation; Starch-Degradation;;
pfam_acc PF00343;
pfam_desc Carbohydrate phosphorylase;
pfam_id Phosphorylase;
pfam_target db:Pfam-A.hmm|PF00343.20 evalue:8.3e-288 score:955.8 best_domain_score:955.6 name:Phosphorylase;
sprot_desc Glycogen phosphorylase;
sprot_id sp|P0AC86|PHSG_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AC86|PHSG_ECOLI 5 790 evalue:7.3e-208 qcov:98.40 identity:46.80;
tigrfam_acc TIGR02093;
tigrfam_desc glycogen/starch/alpha-glucan phosphorylases;
tigrfam_mainrole Energy metabolism;
tigrfam_name P_ylase;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02093 evalue:0 score:1035.9 best_domain_score:1035.7 name:TIGR02093;
96546 95770 CDS
ID metaerg.pl|02937
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodovulum;s__Rhodovulum sp900142935;
genomedb_acc GCF_900142935.1;
genomedb_target db:genomedb|GCF_900142935.1|WP_074220672.1 20 258 evalue:6.6e-87 qcov:92.60 identity:68.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF05050;
pfam_desc Methyltransferase FkbM domain;
pfam_id Methyltransf_21;
pfam_target db:Pfam-A.hmm|PF05050.12 evalue:8.5e-19 score:67.5 best_domain_score:67.2 name:Methyltransf_21;
tigrfam_acc TIGR01444;
tigrfam_desc methyltransferase, FkbM family;
tigrfam_name fkbM_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01444 evalue:2e-26 score:92.3 best_domain_score:91.8 name:TIGR01444;
97502 96849 CDS
ID metaerg.pl|02938
allec_ids 2.1.1.197;
allgo_ids GO:0008168; GO:0010340; GO:0102130; GO:0009102;
allko_ids K00599; K00568; K02169;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCO07;s__HLUCCO07 sp001314705;
genomedb_acc GCA_001314705.1;
genomedb_target db:genomedb|GCA_001314705.1|KPP87729.1 9 214 evalue:3.2e-82 qcov:94.90 identity:72.30;
kegg_pathway_id 00450; 00626; 00130; 00350; 00150; 00380; 00340;
kegg_pathway_name Selenoamino acid metabolism; Naphthalene and anthracene degradation; Ubiquinone biosynthesis; Tyrosine metabolism; Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF08241; PF08242; PF13489; PF13649; PF13847; PF07021; PF05175; PF01209;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methionine biosynthesis protein MetW; Methyltransferase small domain; ubiE/COQ5 methyltransferase family;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; MetW; MTS; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:1.5e-12 score:47.3 best_domain_score:46.7 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.1e-10 score:41.3 best_domain_score:40.8 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:9.7e-10 score:37.8 best_domain_score:37.4 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:8.2e-13 score:48.1 best_domain_score:47.5 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:2.6e-12 score:46.0 best_domain_score:45.6 name:Methyltransf_31; db:Pfam-A.hmm|PF07021.12 evalue:4.9e-09 score:35.3 best_domain_score:34.9 name:MetW; db:Pfam-A.hmm|PF05175.14 evalue:1.5e-06 score:27.1 best_domain_score:24.2 name:MTS; db:Pfam-A.hmm|PF01209.18 evalue:1.4e-07 score:30.3 best_domain_score:30.0 name:Ubie_methyltran;
sprot_desc Malonyl-[acyl-carrier protein] O-methyltransferase;
sprot_id sp|A6UYW3|BIOC_PSEA7;
sprot_target db:uniprot_sprot|sp|A6UYW3|BIOC_PSEA7 5 160 evalue:8.9e-07 qcov:71.90 identity:30.20;
97770 98930 CDS
ID metaerg.pl|02939
allec_ids 5.4.99.9;
allgo_ids GO:0016491; GO:0055114; GO:0008767; GO:0009243;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796651.1 1 382 evalue:1.4e-149 qcov:99.00 identity:66.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id OANTIGEN-PWY; PWY-6397; PWY-6404;
metacyc_pathway_name O-antigen building blocks biosynthesis (E. coli);; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; Cell-Wall-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF01593; PF03275; PF13450;
pfam_desc Flavin containing amine oxidoreductase; UDP-galactopyranose mutase; NAD(P)-binding Rossmann-like domain;
pfam_id Amino_oxidase; GLF; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:1.9e-06 score:26.7 best_domain_score:26.1 name:Amino_oxidase; db:Pfam-A.hmm|PF03275.13 evalue:2.2e-66 score:222.7 best_domain_score:222.4 name:GLF; db:Pfam-A.hmm|PF13450.6 evalue:1.4e-14 score:53.3 best_domain_score:51.6 name:NAD_binding_8;
sprot_desc UDP-galactopyranose mutase;
sprot_id sp|Q48485|GLF1_KLEPN;
sprot_target db:uniprot_sprot|sp|Q48485|GLF1_KLEPN 5 382 evalue:8.6e-122 qcov:97.90 identity:54.00;
100407 98938 CDS
ID metaerg.pl|02940
allec_ids 3.4.17.19;
allgo_ids GO:0004181; GO:0006508; GO:0008270;
allko_ids K01299;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481260.1 1 489 evalue:2.5e-244 qcov:100.00 identity:84.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF02074;
pfam_desc Carboxypeptidase Taq (M32) metallopeptidase;
pfam_id Peptidase_M32;
pfam_target db:Pfam-A.hmm|PF02074.15 evalue:4.4e-156 score:519.7 best_domain_score:519.5 name:Peptidase_M32;
sprot_desc Thermostable carboxypeptidase 1;
sprot_id sp|Q5SLM3|CBP1_THET8;
sprot_target db:uniprot_sprot|sp|Q5SLM3|CBP1_THET8 3 487 evalue:1.1e-97 qcov:99.20 identity:40.60;
101558 100404 CDS
ID metaerg.pl|02941
allec_ids 1.3.-.-;
allgo_ids GO:0006784; GO:0016021; GO:0016627; GO:0055114; GO:0005886;
allko_ids K02259;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470834.1 1 384 evalue:3.1e-189 qcov:100.00 identity:84.40;
kegg_pathway_id 00860; 02020; 00190;
kegg_pathway_name Porphyrin and chlorophyll metabolism; Two-component system - General; Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-5140; PWY-5319;
metacyc_pathway_name cannabinoid biosynthesis;; coumarin metabolism (to melilotic acid);;
metacyc_pathway_type TERPENOPHENOLICS-SYN;; COUMARIN-SYN; PHENYLPROPANOID-DERIVATIVE-DEG;;
pfam_acc PF02628;
pfam_desc Cytochrome oxidase assembly protein;
pfam_id COX15-CtaA;
pfam_target db:Pfam-A.hmm|PF02628.15 evalue:2.5e-105 score:351.3 best_domain_score:351.1 name:COX15-CtaA;
sprot_desc Heme A synthase;
sprot_id sp|Q1GGZ8|CTAA_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GGZ8|CTAA_RUEST 4 379 evalue:1.8e-143 qcov:97.90 identity:65.90;
tm_num 8;
101558 100404 transmembrane_helix
ID metaerg.pl|02942
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i100509-100577o100770-100823i100857-100916o100959-101027i101088-101156o101265-101324i101358-101426o101436-101492i;
102399 101641 CDS
ID metaerg.pl|02943
allec_ids 2.1.1.200;
allgo_ids GO:0003723; GO:0006396; GO:0008173; GO:0005737; GO:0008033;
allko_ids K02533; K15396;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797648.1 1 252 evalue:2.3e-121 qcov:100.00 identity:87.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00588;
pfam_desc SpoU rRNA Methylase family;
pfam_id SpoU_methylase;
pfam_target db:Pfam-A.hmm|PF00588.19 evalue:1.3e-25 score:89.5 best_domain_score:89.0 name:SpoU_methylase;
sprot_desc tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ;
sprot_id sp|Q1C5G8|TRMJ_YERPA;
sprot_target db:uniprot_sprot|sp|Q1C5G8|TRMJ_YERPA 16 248 evalue:1.9e-24 qcov:92.50 identity:34.70;
102520 103137 CDS
ID metaerg.pl|02944
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797647.1 1 205 evalue:6.9e-79 qcov:100.00 identity:72.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF02581;
pfam_desc Thiamine monophosphate synthase;
pfam_id TMP-TENI;
pfam_target db:Pfam-A.hmm|PF02581.17 evalue:1.4e-23 score:82.4 best_domain_score:82.1 name:TMP-TENI;
104256 103363 CDS
ID metaerg.pl|02945
allec_ids 2.7.7.9;
allgo_ids GO:0009058; GO:0016779; GO:0003983; GO:0000271; GO:0006011;
allko_ids K00975; K00677; K01835; K00640; K00963; K02536; K04042; K01840; K00966; K11528; K00972;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246413.1 1 297 evalue:1.4e-149 qcov:100.00 identity:89.60;
kegg_pathway_id 00030; 00010; 00520; 00920; 00521; 00272; 00500; 00540; 00051; 00040; 00530; 00052;
kegg_pathway_name Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Nucleotide sugars metabolism; Sulfur metabolism; Streptomycin biosynthesis; Cysteine metabolism; Starch and sucrose metabolism; Lipopolysaccharide biosynthesis; Fructose and mannose metabolism; Pentose and glucuronate interconversions; Aminosugars metabolism; Galactose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-3801; PWY-621; PWY-5114; SUCSYN-PWY; PWY-5067; COLANSYN-PWY; PWY-3821;
metacyc_pathway_name sucrose degradation II (sucrose synthase);; sucrose degradation III (sucrose invertase);; UDP-sugars interconversion;; sucrose biosynthesis I (from photosynthesis);; glycogen biosynthesis II (from UDP-D-Glucose);; colanic acid building blocks biosynthesis;; D-galactose detoxification;;
metacyc_pathway_type SUCROSE-DEG;; SUCROSE-DEG;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; Sucrose-Biosynthesis; Super-Pathways;; GLYCOGEN-BIOSYN;; Carbohydrates-Biosynthesis; Super-Pathways;; Detoxification;;
pfam_acc PF00483; PF12804;
pfam_desc Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF00483.23 evalue:2.7e-23 score:82.1 best_domain_score:81.6 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:1.5e-06 score:27.9 best_domain_score:27.4 name:NTP_transf_3;
sprot_desc UTP--glucose-1-phosphate uridylyltransferase;
sprot_id sp|P33696|EXON_RHIME;
sprot_target db:uniprot_sprot|sp|P33696|EXON_RHIME 3 295 evalue:1.0e-77 qcov:98.70 identity:49.50;
105186 104395 CDS
ID metaerg.pl|02946
allec_ids 3.1.3.7;
allgo_ids GO:0046854; GO:0005886; GO:0008441; GO:0000287; GO:0006790;
allko_ids K01082;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796961.1 4 260 evalue:9.7e-110 qcov:97.70 identity:77.80;
kegg_pathway_id 00920;
kegg_pathway_name Sulfur metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00459;
pfam_desc Inositol monophosphatase family;
pfam_id Inositol_P;
pfam_target db:Pfam-A.hmm|PF00459.25 evalue:3e-50 score:170.5 best_domain_score:170.3 name:Inositol_P;
sprot_desc 3'(2'),5'-bisphosphate nucleotidase CysQ;
sprot_id sp|Q8XCG6|CYSQ_ECO57;
sprot_target db:uniprot_sprot|sp|Q8XCG6|CYSQ_ECO57 6 251 evalue:6.9e-46 qcov:93.50 identity:47.00;
tigrfam_acc TIGR01331;
tigrfam_desc 3'(2'),5'-bisphosphate nucleotidase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name bisphos_cysQ;
tigrfam_sub1role Sulfur metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR01331 evalue:2.8e-81 score:272.0 best_domain_score:271.7 name:TIGR01331;
105304 106125 CDS
ID metaerg.pl|02947
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796960.1 1 272 evalue:8.5e-117 qcov:99.60 identity:80.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
tm_num 6;
105304 106125 transmembrane_helix
ID metaerg.pl|02948
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i105409-105477o105520-105588i105643-105711o105754-105822i105841-105909o106015-106083i;
106866 106165 CDS
ID metaerg.pl|02949
allec_ids 4.1.1.23;
allgo_ids GO:0004590; GO:0006207; GO:0044205;
allko_ids K13421; K01591;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469629.1 1 233 evalue:4.5e-103 qcov:100.00 identity:85.40;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY0-162; PRPP-PWY; PWY-5686;
metacyc_pathway_name superpathway of pyrimidine ribonucleotides de novo biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;;
metacyc_pathway_type Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; Super-Pathways;; UMP-Biosynthesis;;
pfam_acc PF00215;
pfam_desc Orotidine 5'-phosphate decarboxylase / HUMPS family;
pfam_id OMPdecase;
pfam_target db:Pfam-A.hmm|PF00215.24 evalue:1.8e-40 score:138.2 best_domain_score:138.0 name:OMPdecase;
sprot_desc Orotidine 5'-phosphate decarboxylase;
sprot_id sp|Q3IY00|PYRF_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IY00|PYRF_RHOS4 5 230 evalue:9.9e-97 qcov:97.00 identity:82.30;
tigrfam_acc TIGR01740;
tigrfam_desc orotidine 5'-phosphate decarboxylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name pyrF;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01740 evalue:2.7e-45 score:153.9 best_domain_score:153.7 name:TIGR01740;
108613 106988 CDS
ID metaerg.pl|02950
allko_ids K01448; K01449; K01447;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657577.1 1 541 evalue:6.3e-164 qcov:100.00 identity:58.40;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF01471; PF08823;
pfam_desc Putative peptidoglycan binding domain; Putative peptidoglycan binding domain;
pfam_id PG_binding_1; PG_binding_2;
pfam_target db:Pfam-A.hmm|PF01471.18 evalue:5.2e-20 score:70.6 best_domain_score:41.4 name:PG_binding_1; db:Pfam-A.hmm|PF08823.11 evalue:5.8e-05 score:22.6 best_domain_score:12.3 name:PG_binding_2;
sp YES;
106988 107044 signal_peptide
ID metaerg.pl|02951
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
108837 109298 CDS
ID metaerg.pl|02952
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797086.1 1 153 evalue:3.3e-70 qcov:100.00 identity:88.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:2.1e-12 score:47.0 best_domain_score:46.9 name:Usp;
110617 109442 CDS
ID metaerg.pl|02953
allec_ids 2.3.1.16;
allgo_ids GO:0016747; GO:0003985;
allko_ids K07550; K02615; K07509; K00632; K00626; K07823; K07508; K07513;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798915.1 1 391 evalue:2.2e-182 qcov:100.00 identity:84.90;
kegg_pathway_id 00280; 00281; 00310; 00071; 02020; 00072; 00380; 00632; 00120; 00650; 00640; 00592; 00362; 01040; 00062; 00620;
kegg_pathway_name Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; Fatty acid metabolism; Two-component system - General; Synthesis and degradation of ketone bodies; Tryptophan metabolism; Benzoate degradation via CoA ligation; Bile acid biosynthesis; Butanoate metabolism; Propanoate metabolism; alpha-Linolenic acid metabolism; Benzoate degradation via hydroxylation; Biosynthesis of unsaturated fatty acids; Fatty acid elongation in mitochondria; Pyruvate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-5136; FAO-PWY; PWY-6435; PWY-561;
metacyc_pathway_name fatty acid β-oxidation II (peroxisome);; fatty acid β-oxidation I;; 4-hydroxybenzoate biosynthesis III (plants);; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Fatty-Acid-Degradation;; Fatty-Acid-Degradation;; 4-Hydroxybenzoate-Biosynthesis;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00109; PF02803; PF00108;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id ketoacyl-synt; Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:5.2e-05 score:22.2 best_domain_score:16.9 name:ketoacyl-synt; db:Pfam-A.hmm|PF02803.18 evalue:1.8e-42 score:143.1 best_domain_score:143.1 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:2.8e-84 score:281.7 best_domain_score:281.3 name:Thiolase_N;
sprot_desc Beta-ketothiolase BktB;
sprot_id sp|Q0KBP1|BKTB_CUPNH;
sprot_target db:uniprot_sprot|sp|Q0KBP1|BKTB_CUPNH 3 391 evalue:3.9e-122 qcov:99.50 identity:60.10;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:3.4e-127 score:423.7 best_domain_score:423.5 name:TIGR01930;
111051 112292 CDS
ID metaerg.pl|02954
allko_ids K08256; K00749; K00712; K13668; K00703; K02844;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseivivax;s__Roseivivax halotolerans;
genomedb_acc GCF_900115815.1;
genomedb_target db:genomedb|GCF_900115815.1|WP_093013984.1 1 411 evalue:2.6e-157 qcov:99.50 identity:70.80;
kegg_pathway_id 00500; 00540; 01031;
kegg_pathway_name Starch and sucrose metabolism; Lipopolysaccharide biosynthesis; Glycan structures - biosynthesis 2;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF00534; PF13439; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:4.5e-19 score:67.9 best_domain_score:67.1 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:5.5e-08 score:32.2 best_domain_score:30.7 name:Glyco_transf_4; db:Pfam-A.hmm|PF13692.6 evalue:2.5e-19 score:69.3 best_domain_score:68.3 name:Glyco_trans_1_4;
114652 112418 CDS
ID metaerg.pl|02955
allec_ids 3.1.13.1;
allgo_ids GO:0003723; GO:0004540; GO:0005737; GO:0008859;
allko_ids K12573;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798913.1 1 743 evalue:0.0e+00 qcov:99.90 identity:81.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY0-1479;
metacyc_pathway_name tRNA processing;;
metacyc_pathway_type Nucleic-Acid-Processing;;
pfam_acc PF17876; PF00773; PF00575;
pfam_desc Cold shock domain; RNB domain; S1 RNA binding domain;
pfam_id CSD2; RNB; S1;
pfam_target db:Pfam-A.hmm|PF17876.1 evalue:1.2e-10 score:40.7 best_domain_score:32.7 name:CSD2; db:Pfam-A.hmm|PF00773.19 evalue:9.8e-94 score:313.5 best_domain_score:313.2 name:RNB; db:Pfam-A.hmm|PF00575.23 evalue:6.5e-10 score:38.4 best_domain_score:35.3 name:S1;
sprot_desc Ribonuclease R;
sprot_id sp|P40611|RNR_VIBPA;
sprot_target db:uniprot_sprot|sp|P40611|RNR_VIBPA 3 703 evalue:1.2e-100 qcov:94.20 identity:36.00;
tigrfam_acc TIGR00358; TIGR02063;
tigrfam_desc VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R;
tigrfam_mainrole Transcription; Transcription;
tigrfam_name 3_prime_RNase; RNase_R;
tigrfam_sub1role Degradation of RNA; Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00358 evalue:3e-139 score:464.4 best_domain_score:464.1 name:TIGR00358; db:TIGRFAMs.hmm|TIGR02063 evalue:4.7e-188 score:625.9 best_domain_score:625.7 name:TIGR02063;
114913 116082 CDS
ID metaerg.pl|02956
allec_ids 2.6.1.1;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0004069;
allko_ids K00825; K00812;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799207.1 1 387 evalue:8.5e-163 qcov:99.50 identity:72.10;
kegg_pathway_id 00350; 00360; 00300; 00330; 00251; 00252; 00272; 00400; 00401; 00710; 00310;
kegg_pathway_name Tyrosine metabolism; Phenylalanine metabolism; Lysine biosynthesis; Arginine and proline metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Cysteine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Novobiocin biosynthesis; Carbon fixation in photosynthetic organisms; Lysine degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id THRESYN-PWY; MALATE-ASPARTATE-SHUTTLE-PWY; PWY-6318; ASPARTATESYN-PWY; PWY0-781; PWY-5345; P4-PWY; PWY-3001; PWY-5347; GLUTDEG-PWY; PWY-5913; PWY-5328; ASPARTATE-DEG1-PWY; ASPASN-PWY; PWY-6146; CYSTEINE-DEG-PWY;
metacyc_pathway_name superpathway of L-threonine biosynthesis;; L-aspartate degradation II;; L-phenylalanine degradation IV (mammalian, via side chain);; L-aspartate biosynthesis;; aspartate superpathway;; superpathway of L-methionine biosynthesis (by sulfhydrylation);; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-methionine biosynthesis (transsulfuration);; L-glutamate degradation II;; partial TCA cycle (obligate autotrophs);; superpathway of L-methionine salvage and degradation;; L-aspartate degradation I;; superpathway of L-aspartate and L-asparagine biosynthesis;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; L-cysteine degradation I;;
metacyc_pathway_type Super-Pathways; THREONINE-BIOSYNTHESIS;; ASPARTATE-DEG;; PHENYLALANINE-DEG;; ASPARTATE-SYN;; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; ASPARTATE-SYN; GLUTAMATE-DEG;; TCA-VARIANTS;; METHIONINE-DEG; Super-Pathways;; ASPARTATE-DEG;; Amino-Acid-Biosynthesis; Metabolic-Clusters; Super-Pathways;; Biosynthesis; Super-Pathways;; CYSTEINE-DEG;;
pfam_acc PF00155; PF12897; PF01053; PF01041;
pfam_desc Aminotransferase class I and II; Alanine-glyoxylate amino-transferase; Cys/Met metabolism PLP-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; Aminotran_MocR; Cys_Met_Meta_PP; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:3e-45 score:154.2 best_domain_score:153.9 name:Aminotran_1_2; db:Pfam-A.hmm|PF12897.7 evalue:1.9e-05 score:22.9 best_domain_score:21.0 name:Aminotran_MocR; db:Pfam-A.hmm|PF01053.20 evalue:9.6e-06 score:23.6 best_domain_score:23.0 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF01041.17 evalue:2e-06 score:26.6 best_domain_score:25.7 name:DegT_DnrJ_EryC1;
sprot_desc Aspartate aminotransferase;
sprot_id sp|Q56232|AAT_THET8;
sprot_target db:uniprot_sprot|sp|Q56232|AAT_THET8 33 373 evalue:3.0e-29 qcov:87.70 identity:30.30;
116146 117990 CDS
ID metaerg.pl|02957
allec_ids 5.2.1.8;
allgo_ids GO:0003755; GO:0016021; GO:0005886;
allko_ids K03770;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084634867.1 1 614 evalue:1.6e-227 qcov:100.00 identity:65.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
pfam_acc PF13145; PF09312; PF13623; PF13624;
pfam_desc PPIC-type PPIASE domain; SurA N-terminal domain; SurA N-terminal domain; SurA N-terminal domain;
pfam_id Rotamase_2; SurA_N; SurA_N_2; SurA_N_3;
pfam_target db:Pfam-A.hmm|PF13145.6 evalue:4e-26 score:91.5 best_domain_score:48.2 name:Rotamase_2; db:Pfam-A.hmm|PF09312.11 evalue:5e-09 score:35.5 best_domain_score:27.0 name:SurA_N; db:Pfam-A.hmm|PF13623.6 evalue:3.7e-24 score:84.5 best_domain_score:83.1 name:SurA_N_2; db:Pfam-A.hmm|PF13624.6 evalue:1.3e-38 score:131.6 best_domain_score:131.6 name:SurA_N_3;
sp YES;
sprot_desc Peptidyl-prolyl cis-trans isomerase D;
sprot_id sp|P0ADY2|PPID_ECOL6;
sprot_target db:uniprot_sprot|sp|P0ADY2|PPID_ECOL6 46 512 evalue:1.7e-10 qcov:76.10 identity:23.20;
tm_num 1;
116146 116250 signal_peptide
ID metaerg.pl|02958
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
116146 117990 transmembrane_helix
ID metaerg.pl|02959
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
topology i116179-116247o;
117995 119203 CDS
ID metaerg.pl|02960
allec_ids 4.1.3.27;
allgo_ids GO:0009058; GO:0004049; GO:0046872; GO:0000162;
allko_ids K13497; K13950; K13501; K01658; K01657; K02619; K03342; K01665; K01664; K01663; K01656;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798166.1 1 403 evalue:1.8e-208 qcov:100.00 identity:90.60;
kegg_pathway_id 00620; 02020; 00400; 00790;
kegg_pathway_name Pyruvate metabolism; Two-component system - General; Phenylalanine, tyrosine and tryptophan biosynthesis; Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.298024; 23.6079; 2.30758; 42.8279; 16.6144;
metacyc_pathway_id PWY-5958; TRPSYN-PWY; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY;
metacyc_pathway_name acridone alkaloid biosynthesis;; L-tryptophan biosynthesis;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;;
metacyc_pathway_type ALKALOIDS-SYN;; TRYPTOPHAN-BIOSYNTHESIS;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF04715; PF00425;
pfam_desc Anthranilate synthase component I, N terminal region; chorismate binding enzyme;
pfam_id Anth_synt_I_N; Chorismate_bind;
pfam_target db:Pfam-A.hmm|PF04715.13 evalue:7.2e-31 score:106.5 best_domain_score:101.9 name:Anth_synt_I_N; db:Pfam-A.hmm|PF00425.18 evalue:5.9e-55 score:185.8 best_domain_score:185.2 name:Chorismate_bind;
sprot_desc Anthranilate synthase component 1;
sprot_id sp|P95646|TRPE_RHOS4;
sprot_target db:uniprot_sprot|sp|P95646|TRPE_RHOS4 8 403 evalue:1.8e-170 qcov:98.30 identity:76.50;
>Feature NODE_15_length_118667_cov_7.54956
641 3 CDS
ID metaerg.pl|02961
allgo_ids GO:0006089;
allko_ids K18928;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Marinobacterium_A;s__Marinobacterium_A profundum;
genomedb_acc GCF_001528745.1;
genomedb_target db:genomedb|GCF_001528745.1|WP_067291291.1 5 213 evalue:1.4e-66 qcov:98.10 identity:60.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF02754;
pfam_desc Cysteine-rich domain;
pfam_id CCG;
pfam_target db:Pfam-A.hmm|PF02754.16 evalue:5.8e-23 score:80.1 best_domain_score:42.1 name:CCG;
sprot_desc Lactate utilization protein A;
sprot_id sp|Q8ET92|LUTA_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8ET92|LUTA_OCEIH 5 213 evalue:2.4e-41 qcov:98.10 identity:40.50;
1369 638 CDS
ID metaerg.pl|02962
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7455;s__UBA7455 sp003452295;
genomedb_acc GCA_003452295.1;
genomedb_target db:genomedb|GCA_003452295.1|HAK51570.1 2 222 evalue:1.2e-34 qcov:90.90 identity:37.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF13472;
pfam_desc GDSL-like Lipase/Acylhydrolase family;
pfam_id Lipase_GDSL_2;
pfam_target db:Pfam-A.hmm|PF13472.6 evalue:4.3e-22 score:78.6 best_domain_score:78.0 name:Lipase_GDSL_2;
tm_num 1;
1369 638 transmembrane_helix
ID metaerg.pl|02963
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i650-718o;
1524 2465 CDS
ID metaerg.pl|02964
allec_ids 3.1.1.1;
allgo_ids GO:0016787; GO:0080030;
allko_ids K01432; K01181; K01046;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__HTCC2207;s__HTCC2207 sp001438605;
genomedb_acc GCA_001438605.1;
genomedb_target db:genomedb|GCA_001438605.1|KRP19527.1 1 312 evalue:3.1e-107 qcov:99.70 identity:65.70;
kegg_pathway_id 00380; 00630; 00561;
kegg_pathway_name Tryptophan metabolism; Glyoxylate and dicarboxylate metabolism; Glycerolipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-6303;
metacyc_pathway_name methyl indole-3-acetate interconversion;;
metacyc_pathway_type Auxin-Biosynthesis; Interconversion;;
pfam_acc PF07859; PF00135;
pfam_desc alpha/beta hydrolase fold; Carboxylesterase family;
pfam_id Abhydrolase_3; COesterase;
pfam_target db:Pfam-A.hmm|PF07859.13 evalue:1.9e-78 score:262.4 best_domain_score:262.0 name:Abhydrolase_3; db:Pfam-A.hmm|PF00135.28 evalue:2.8e-05 score:22.4 best_domain_score:19.3 name:COesterase;
sprot_desc Carboxylesterase NlhH;
sprot_id sp|P9WK86|NLHH_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WK86|NLHH_MYCTO 3 311 evalue:1.4e-45 qcov:98.70 identity:39.20;
2585 2872 CDS
ID metaerg.pl|02965
allko_ids K09780;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pleomorphomonadaceae;g__Mongoliimonas;s__Mongoliimonas terrestris;
genomedb_acc GCF_001927285.1;
genomedb_target db:genomedb|GCF_001927285.1|WP_075214182.1 1 92 evalue:1.5e-20 qcov:96.80 identity:51.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF03795;
pfam_desc YCII-related domain;
pfam_id YCII;
pfam_target db:Pfam-A.hmm|PF03795.14 evalue:1.1e-16 score:60.2 best_domain_score:60.0 name:YCII;
sprot_desc hypothetical protein;
sprot_id sp|P0AB56|YCII_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AB56|YCII_ECOL6 1 87 evalue:7.3e-06 qcov:91.60 identity:31.60;
2876 3820 CDS
ID metaerg.pl|02966
allec_ids 1.1.1.26;
allgo_ids GO:0016616; GO:0051287; GO:0055114; GO:0005737; GO:0047964;
allko_ids K00058; K00018; K00015;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000075.1_140 1 313 evalue:2.8e-108 qcov:99.70 identity:64.20;
kegg_pathway_id 00630; 00260;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00389; PF02826;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain;
pfam_id 2-Hacid_dh; 2-Hacid_dh_C;
pfam_target db:Pfam-A.hmm|PF00389.30 evalue:2e-27 score:94.7 best_domain_score:94.5 name:2-Hacid_dh; db:Pfam-A.hmm|PF02826.19 evalue:2.8e-51 score:172.6 best_domain_score:172.2 name:2-Hacid_dh_C;
sprot_desc Glyoxylate reductase;
sprot_id sp|A1RYE4|GYAR_THEPD;
sprot_target db:uniprot_sprot|sp|A1RYE4|GYAR_THEPD 55 307 evalue:5.0e-43 qcov:80.60 identity:44.20;
3860 4183 CDS
ID metaerg.pl|02967
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR30848.1 11 105 evalue:4.8e-15 qcov:88.80 identity:47.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
4685 4257 CDS
ID metaerg.pl|02968
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium;s__Phenylobacterium zucineum_B;
genomedb_acc GCA_002221445.1;
genomedb_target db:genomedb|GCA_002221445.1|OXE37482.1 3 141 evalue:5.9e-53 qcov:97.90 identity:74.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01575; PF13452;
pfam_desc MaoC like domain; N-terminal half of MaoC dehydratase;
pfam_id MaoC_dehydratas; MaoC_dehydrat_N;
pfam_target db:Pfam-A.hmm|PF01575.19 evalue:5.3e-22 score:76.9 best_domain_score:76.7 name:MaoC_dehydratas; db:Pfam-A.hmm|PF13452.6 evalue:1.5e-06 score:27.6 best_domain_score:24.8 name:MaoC_dehydrat_N;
5202 4693 CDS
ID metaerg.pl|02969
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000185.1_5 1 164 evalue:1.4e-66 qcov:97.00 identity:73.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF13452;
pfam_desc N-terminal half of MaoC dehydratase;
pfam_id MaoC_dehydrat_N;
pfam_target db:Pfam-A.hmm|PF13452.6 evalue:5.8e-23 score:80.7 best_domain_score:79.4 name:MaoC_dehydrat_N;
6054 5269 CDS
ID metaerg.pl|02970
allec_ids 4.2.1.116;
allgo_ids GO:0003824; GO:0043956; GO:0006631;
allko_ids K07514; K07511; K01825; K10527; K07515; K01715; K01782; K07516; K01692; K00022; K13767; K15016; K15019;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Immundisolibacterales;f__Immundisolibacteraceae;g__Immundisolibacter;s__Immundisolibacter sp003526065;
genomedb_acc GCA_003526065.1;
genomedb_target db:genomedb|GCA_003526065.1|HCO44018.1 6 261 evalue:2.5e-110 qcov:98.10 identity:78.10;
kegg_pathway_id 00903; 00062; 01040; 00071; 00410; 00592; 00650; 00640; 00310; 00280; 00281; 00930; 00632; 00380;
kegg_pathway_name Limonene and pinene degradation; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids; Fatty acid metabolism; beta-Alanine metabolism; alpha-Linolenic acid metabolism; Butanoate metabolism; Propanoate metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Caprolactam degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-5789; PWY-4221; PWY-3941; PWY-5743;
metacyc_pathway_name 3-hydroxypropanoate/4-hydroxybutanate cycle;; superpathway of coenzyme A biosynthesis II (plants);; β-alanine biosynthesis II;; 3-hydroxypropanoate cycle;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; CoA-Biosynthesis; Super-Pathways;; Beta-Alanine-Biosynthesis;; Autotrophic-CO2-Fixation;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:2.7e-63 score:212.9 best_domain_score:212.7 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:1.5e-38 score:132.4 best_domain_score:123.0 name:ECH_2;
sprot_desc 3-hydroxypropionyl-coenzyme A dehydratase;
sprot_id sp|A4YI89|HPCD_METS5;
sprot_target db:uniprot_sprot|sp|A4YI89|HPCD_METS5 5 261 evalue:9.8e-53 qcov:98.50 identity:45.90;
6912 6169 CDS
ID metaerg.pl|02971
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000075.1_135 2 245 evalue:2.6e-32 qcov:98.80 identity:35.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
tm_num 1;
6912 6169 transmembrane_helix
ID metaerg.pl|02972
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology o6178-6246i;
8295 7102 CDS
ID metaerg.pl|02973
allgo_ids GO:0005509; GO:0007155;
allko_ids K02040;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000185.1_7 28 393 evalue:2.2e-73 qcov:92.20 identity:44.90;
kegg_pathway_id 02020; 02010;
kegg_pathway_name Two-component system - General; ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00691; PF13505; PF02412;
pfam_desc OmpA family; Outer membrane protein beta-barrel domain; Thrombospondin type 3 repeat;
pfam_id OmpA; OMP_b-brl; TSP_3;
pfam_target db:Pfam-A.hmm|PF00691.20 evalue:8.1e-24 score:83.1 best_domain_score:82.5 name:OmpA; db:Pfam-A.hmm|PF13505.6 evalue:6.3e-08 score:32.2 best_domain_score:31.6 name:OMP_b-brl; db:Pfam-A.hmm|PF02412.18 evalue:8e-12 score:43.9 best_domain_score:20.7 name:TSP_3;
sp YES;
7102 7158 signal_peptide
ID metaerg.pl|02974
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
8635 9489 CDS
ID metaerg.pl|02975
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K03442;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000071.1_72 9 276 evalue:4.1e-82 qcov:94.40 identity:60.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00924; PF05552;
pfam_desc Mechanosensitive ion channel; Conserved TM helix;
pfam_id MS_channel; TM_helix;
pfam_target db:Pfam-A.hmm|PF00924.18 evalue:8.2e-53 score:178.2 best_domain_score:177.8 name:MS_channel; db:Pfam-A.hmm|PF05552.12 evalue:3.7e-09 score:35.6 best_domain_score:35.6 name:TM_helix;
sprot_desc Uncharacterized MscS family protein bbp_402;
sprot_id sp|Q89AB5|Y402_BUCBP;
sprot_target db:uniprot_sprot|sp|Q89AB5|Y402_BUCBP 21 278 evalue:1.4e-47 qcov:90.80 identity:39.50;
tm_num 3;
8635 9489 transmembrane_helix
ID metaerg.pl|02976
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology o8716-8784i8866-8934o8944-9012i;
11034 9742 CDS
ID metaerg.pl|02977
allec_ids 2.7.13.3;
allgo_ids GO:0007165; GO:0016021; GO:0005887; GO:0005524; GO:0000155; GO:0047484;
allko_ids K07647; K13040; K10942; K07717; K07675; K11383; K02486; K12767; K11520; K07769; K14509; K04757; K11357; K10125; K11629; K13532; K07709; K07644; K01769; K07650; K10681; K07676; K06379; K13587; K11527; K02030; K07678; K10715; K07655; K14489; K02482; K08801; K02480; K07638; K07653; K07636; K07697; K02489; K07716; K07640; K07710; K01768; K07656; K02668; K03388; K08479; K07674; K10916; K11231; K07643; K02491; K07677; K07708; K07645; K07704; K10909; K08282; K02484; K11356; K11640; K11711; K07642; K02478; K07679; K07648; K07651; K07698; K07718; K11354; K07778; K07768; K11633; K08884; K00873; K07711; K11328; K13533; K07646; K13598; K07641; K07673; K08475; K07639; K07652; K07654; K00936; K07682; K07649; K03407; K07637;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR30526.1 2 424 evalue:1.4e-129 qcov:98.40 identity:61.20;
kegg_pathway_id 00710; 00010; 00230; 05111; 04011; 02020; 03090; 00620; 00790;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Purine metabolism; Vibrio cholerae pathogenic cycle; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00672; PF02518; PF00512;
pfam_desc HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HAMP; HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF00672.25 evalue:4e-10 score:39.2 best_domain_score:37.3 name:HAMP; db:Pfam-A.hmm|PF02518.26 evalue:8.1e-24 score:83.5 best_domain_score:82.8 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:3.5e-09 score:35.8 best_domain_score:34.4 name:HisKA;
sprot_desc Osmolarity sensor protein EnvZ;
sprot_id sp|P08982|ENVZ_SALTY;
sprot_target db:uniprot_sprot|sp|P08982|ENVZ_SALTY 97 428 evalue:5.8e-34 qcov:77.20 identity:30.70;
tm_num 2;
11034 9742 transmembrane_helix
ID metaerg.pl|02978
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i9760-9828o10174-10242i;
11741 11034 CDS
ID metaerg.pl|02979
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0006355;
allko_ids K01769; K07676; K10681; K06379; K07709; K07644; K13761; K11383; K02486; K12767; K11357; K10125; K04757; K07647; K07717; K07675; K03388; K02668; K10916; K08479; K07716; K02489; K01768; K07710; K02480; K02482; K07636; K07653; K07638; K11527; K07678; K10715; K11711; K07642; K00760; K02484; K11640; K11356; K07677; K07708; K08282; K01937; K07704; K11231; K02491; K07682; K07654; K07637; K03407; K01120; K07673; K07639; K08475; K07646; K07641; K07652; K02575; K07768; K11354; K07778; K08884; K07711; K07648; K02478; K07679; K07718; K07651; K07659;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000185.1_10 5 232 evalue:4.0e-91 qcov:97.00 identity:76.30;
kegg_pathway_id 00230; 05111; 00240; 00983; 00790; 02020; 04011; 03090;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; Drug metabolism - other enzymes; Folate biosynthesis; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:2e-27 score:94.8 best_domain_score:94.3 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:8e-24 score:82.8 best_domain_score:81.8 name:Trans_reg_C;
sprot_desc Transcriptional regulatory protein OmpR;
sprot_id sp|P0AA18|OMPR_ECO57;
sprot_target db:uniprot_sprot|sp|P0AA18|OMPR_ECO57 7 232 evalue:1.6e-65 qcov:96.20 identity:55.50;
12258 11749 CDS
ID metaerg.pl|02980
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000185.1_11 26 150 evalue:1.1e-10 qcov:74.00 identity:39.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
sp YES;
11749 11832 signal_peptide
ID metaerg.pl|02981
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
13600 12410 CDS
ID metaerg.pl|02982
allec_ids 2.3.1.16;
allgo_ids GO:0016747; GO:0003988; GO:0006635; GO:0010124;
allko_ids K07550; K02615; K07509; K00632; K00626; K07508; K07823; K07513;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000185.1_12 4 396 evalue:4.7e-177 qcov:99.20 identity:79.90;
kegg_pathway_id 00620; 00062; 00362; 01040; 00592; 00640; 00650; 00120; 00632; 00380; 00072; 02020; 00071; 00310; 00280; 00281;
kegg_pathway_name Pyruvate metabolism; Fatty acid elongation in mitochondria; Benzoate degradation via hydroxylation; Biosynthesis of unsaturated fatty acids; alpha-Linolenic acid metabolism; Propanoate metabolism; Butanoate metabolism; Bile acid biosynthesis; Benzoate degradation via CoA ligation; Tryptophan metabolism; Synthesis and degradation of ketone bodies; Two-component system - General; Fatty acid metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-5136; PWY-6435; FAO-PWY; PWY-561;
metacyc_pathway_name fatty acid β-oxidation II (peroxisome);; 4-hydroxybenzoate biosynthesis III (plants);; fatty acid β-oxidation I;; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Fatty-Acid-Degradation;; 4-Hydroxybenzoate-Biosynthesis;; Fatty-Acid-Degradation;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00109; PF02803; PF00108;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id ketoacyl-synt; Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:3.6e-05 score:22.7 best_domain_score:21.3 name:ketoacyl-synt; db:Pfam-A.hmm|PF02803.18 evalue:8.7e-48 score:160.3 best_domain_score:159.1 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:1.1e-66 score:224.1 best_domain_score:223.3 name:Thiolase_N;
sprot_desc 3-ketoacyl-CoA thiolase;
sprot_id sp|O32177|FADA_BACSU;
sprot_target db:uniprot_sprot|sp|O32177|FADA_BACSU 4 394 evalue:1.6e-94 qcov:98.70 identity:48.80;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:1.6e-130 score:434.7 best_domain_score:434.5 name:TIGR01930;
13858 14358 CDS
ID metaerg.pl|02983
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000075.1_123 5 131 evalue:1.2e-28 qcov:76.50 identity:55.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
15587 14301 CDS
ID metaerg.pl|02984
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalospirales_A;f__Halofilaceae;g__Halofilum;s__Halofilum ochraceum;
genomedb_acc GCF_001614315.2;
genomedb_target db:genomedb|GCF_001614315.2|WP_067560694.1 4 419 evalue:5.2e-145 qcov:97.20 identity:63.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF08014;
pfam_desc Domain of unknown function (DUF1704);
pfam_id DUF1704;
pfam_target db:Pfam-A.hmm|PF08014.11 evalue:4.1e-113 score:377.3 best_domain_score:377.1 name:DUF1704;
15886 18318 CDS
ID metaerg.pl|02985
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Planctomycetota;c__Planctomycetes;o__Pirellulales;f__UBA1268;g__BAIKAL-G1-2R;s__BAIKAL-G1-2R sp002737405;
genomedb_acc GCA_002737405.1;
genomedb_target db:genomedb|GCA_002737405.1|PHX99643.1 9 791 evalue:2.5e-193 qcov:96.70 identity:46.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01593; PF00875; PF00890; PF03441; PF13450;
pfam_desc Flavin containing amine oxidoreductase; DNA photolyase; FAD binding domain; FAD binding domain of DNA photolyase; NAD(P)-binding Rossmann-like domain;
pfam_id Amino_oxidase; DNA_photolyase; FAD_binding_2; FAD_binding_7; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:1e-16 score:60.5 best_domain_score:32.2 name:Amino_oxidase; db:Pfam-A.hmm|PF00875.18 evalue:1.2e-08 score:34.4 best_domain_score:33.5 name:DNA_photolyase; db:Pfam-A.hmm|PF00890.24 evalue:8.8e-06 score:24.3 best_domain_score:23.3 name:FAD_binding_2; db:Pfam-A.hmm|PF03441.14 evalue:6.6e-07 score:28.2 best_domain_score:27.6 name:FAD_binding_7; db:Pfam-A.hmm|PF13450.6 evalue:2.8e-12 score:45.9 best_domain_score:44.2 name:NAD_binding_8;
18417 18887 CDS
ID metaerg.pl|02986
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
19528 19088 CDS
ID metaerg.pl|02987
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__2-12-FULL-62-58;s__2-12-FULL-62-58 sp001771985;
genomedb_acc GCA_001771985.1;
genomedb_target db:genomedb|GCA_001771985.1|OGA40316.1 28 146 evalue:2.0e-27 qcov:81.50 identity:54.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF04247;
pfam_desc Invasion gene expression up-regulator, SirB;
pfam_id SirB;
pfam_target db:Pfam-A.hmm|PF04247.12 evalue:1.2e-36 score:124.6 best_domain_score:124.4 name:SirB;
sprot_desc hypothetical protein;
sprot_id sp|P0A238|SIRB2_SALTI;
sprot_target db:uniprot_sprot|sp|P0A238|SIRB2_SALTI 29 140 evalue:2.0e-10 qcov:76.70 identity:38.80;
tm_num 3;
19528 19088 transmembrane_helix
ID metaerg.pl|02988
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i19163-19231o19349-19417i19436-19504o;
19762 20649 CDS
ID metaerg.pl|02989
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Parvibaculaceae;g__Mf105b01;s__Mf105b01 sp002715765;
genomedb_acc GCA_002715765.1;
genomedb_target db:genomedb|GCA_002715765.1|MBG53429.1 2 291 evalue:6.8e-128 qcov:98.30 identity:71.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:9.4e-27 score:93.5 best_domain_score:89.6 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:5e-20 score:72.3 best_domain_score:72.0 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:7.4e-18 score:63.9 best_domain_score:62.9 name:Hydrolase_4;
20646 21527 CDS
ID metaerg.pl|02990
allgo_ids GO:0016787;
allko_ids K01432; K01181; K01730;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Spongiibacteraceae;g__Spongiibacter;s__Spongiibacter tropicus;
genomedb_acc GCF_000420325.1;
genomedb_target db:genomedb|GCF_000420325.1|WP_022958174.1 8 278 evalue:2.1e-49 qcov:92.50 identity:41.10;
kegg_pathway_id 00040; 00380; 00630;
kegg_pathway_name Pentose and glucuronate interconversions; Tryptophan metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF07859; PF08840; PF01738; PF03583; PF02129; PF00326;
pfam_desc alpha/beta hydrolase fold; BAAT / Acyl-CoA thioester hydrolase C terminal; Dienelactone hydrolase family; Secretory lipase ; X-Pro dipeptidyl-peptidase (S15 family); Prolyl oligopeptidase family;
pfam_id Abhydrolase_3; BAAT_C; DLH; LIP; Peptidase_S15; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF07859.13 evalue:6.1e-24 score:84.3 best_domain_score:80.4 name:Abhydrolase_3; db:Pfam-A.hmm|PF08840.11 evalue:2.9e-05 score:23.3 best_domain_score:19.0 name:BAAT_C; db:Pfam-A.hmm|PF01738.18 evalue:3.1e-11 score:42.5 best_domain_score:29.8 name:DLH; db:Pfam-A.hmm|PF03583.14 evalue:4.6e-05 score:22.1 best_domain_score:11.8 name:LIP; db:Pfam-A.hmm|PF02129.18 evalue:8e-05 score:21.6 best_domain_score:11.5 name:Peptidase_S15; db:Pfam-A.hmm|PF00326.21 evalue:1.7e-11 score:43.2 best_domain_score:40.6 name:Peptidase_S9;
sp YES;
20646 20708 lipoprotein_signal_peptide
ID metaerg.pl|02991
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
21524 22672 CDS
ID metaerg.pl|02992
allgo_ids GO:0003824; GO:0009058;
genomedb_OC d__Bacteria;p__Planctomycetota;c__Planctomycetes;o__Pirellulales;f__Thermoguttaceae;g__Thermogutta;s__Thermogutta terrifontis;
genomedb_acc GCF_002277955.1;
genomedb_target db:genomedb|GCF_002277955.1|WP_095413659.1 7 378 evalue:5.2e-88 qcov:97.40 identity:48.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01467;
pfam_desc Cytidylyltransferase-like;
pfam_id CTP_transf_like;
pfam_target db:Pfam-A.hmm|PF01467.26 evalue:1.1e-05 score:24.9 best_domain_score:23.4 name:CTP_transf_like;
22669 23151 CDS
ID metaerg.pl|02993
allec_ids 3.5.4.3;
allgo_ids GO:0002100; GO:0008251; GO:0008892; GO:0047974; GO:0008270; GO:0006147; GO:0006152;
allko_ids K01487; K01485;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__Gilvimarinus;s__Gilvimarinus chinensis;
genomedb_acc GCF_000377745.1;
genomedb_target db:genomedb|GCF_000377745.1|WP_020208505.1 11 160 evalue:7.3e-36 qcov:93.80 identity:54.00;
kegg_pathway_id 00240; 00230;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id SALVPURINE2-PWY; P164-PWY; PWY-6353; P121-PWY; PWY-5497; PWY-5044;
metacyc_pathway_name xanthine and xanthosine salvage;; purine nucleobases degradation I (anaerobic);; purine nucleotides degradation II (aerobic);; adenine and adenosine salvage I;; purine nucleobases degradation II (anaerobic);; purine nucleotides degradation I (plants);;
metacyc_pathway_type Purine-Nucleotides-Salvage;; Fermentation; Purine-Degradation;; Purine-Degradation; Super-Pathways;; Adenine-Adenosine-Salvage;; Fermentation; Purine-Degradation;; Purine-Degradation; Super-Pathways;;
pfam_acc PF00383; PF14437;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase;
pfam_id dCMP_cyt_deam_1; MafB19-deam;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:2.8e-19 score:68.1 best_domain_score:67.6 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:2.6e-14 score:52.4 best_domain_score:52.3 name:MafB19-deam;
sprot_desc Guanine deaminase;
sprot_id sp|O34598|GUAD_BACSU;
sprot_target db:uniprot_sprot|sp|O34598|GUAD_BACSU 6 160 evalue:3.1e-25 qcov:96.90 identity:45.50;
23744 23337 CDS
ID metaerg.pl|02994
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Ectothiorhodospira;s__Ectothiorhodospira marina;
genomedb_acc GCF_900109495.1;
genomedb_target db:genomedb|GCF_900109495.1|WP_090252550.1 6 134 evalue:1.0e-14 qcov:95.60 identity:43.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF13767;
pfam_desc Domain of unknown function (DUF4168);
pfam_id DUF4168;
pfam_target db:Pfam-A.hmm|PF13767.6 evalue:4e-19 score:68.8 best_domain_score:68.4 name:DUF4168;
sp YES;
23337 23414 signal_peptide
ID metaerg.pl|02995
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
25330 23945 CDS
ID metaerg.pl|02996
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0042910; GO:0006811;
allko_ids K03327;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA4582;s__UBA4582 sp002389265;
genomedb_acc GCA_002389265.1;
genomedb_target db:genomedb|GCA_002389265.1|DGOD01000376.1_2 18 456 evalue:3.1e-135 qcov:95.20 identity:58.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01554;
pfam_desc MatE;
pfam_id MatE;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:4.2e-57 score:191.5 best_domain_score:100.2 name:MatE;
sprot_desc Probable multidrug resistance protein NorM;
sprot_id sp|Q9WZS2|NORM_THEMA;
sprot_target db:uniprot_sprot|sp|Q9WZS2|NORM_THEMA 14 457 evalue:2.2e-39 qcov:96.30 identity:29.80;
tigrfam_acc TIGR00797;
tigrfam_desc MATE efflux family protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name matE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00797 evalue:1.5e-71 score:240.5 best_domain_score:240.2 name:TIGR00797;
tm_num 11;
25330 23945 transmembrane_helix
ID metaerg.pl|02997
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i24005-24073o24131-24199i24236-24304o24362-24430i24449-24517o24545-24604i24719-24787o24800-24868i24929-24997o25025-25093i25151-25219o;
25490 26311 CDS
ID metaerg.pl|02998
allec_ids 4.2.1.149;
allgo_ids GO:0003824; GO:0016836; GO:0009437;
allko_ids K07514; K01825; K10527; K07515; K01692; K00022; K01782; K07516; K15016; K13767; K08299;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000299.1_13 11 273 evalue:4.7e-99 qcov:96.30 identity:72.00;
kegg_pathway_id 00281; 00280; 00310; 00380; 00930; 00632; 01040; 00903; 00062; 00650; 00640; 00592; 00410; 00071;
kegg_pathway_name Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Butanoate metabolism; Propanoate metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:1.2e-48 score:164.8 best_domain_score:164.5 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:1.3e-28 score:99.7 best_domain_score:96.1 name:ECH_2;
sprot_desc Carnitinyl-CoA dehydratase;
sprot_id sp|B4EY26|CAID_PROMH;
sprot_target db:uniprot_sprot|sp|B4EY26|CAID_PROMH 21 273 evalue:3.4e-24 qcov:92.70 identity:32.00;
26340 27221 CDS
ID metaerg.pl|02999
allgo_ids GO:0016705; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000075.1_110 1 288 evalue:7.2e-130 qcov:98.30 identity:77.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:1.5e-29 score:102.6 best_domain_score:93.1 name:Bac_luciferase;
tigrfam_acc TIGR03620;
tigrfam_desc probable F420-dependent oxidoreductase, MSMEG_4141 family;
tigrfam_mainrole Unknown function;
tigrfam_name F420_MSMEG_4141;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR03620 evalue:5.7e-95 score:317.0 best_domain_score:316.8 name:TIGR03620;
27802 27299 CDS
ID metaerg.pl|03000
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudoruegeria_D;s__Pseudoruegeria_D haliotis;
genomedb_acc GCF_003003255.1;
genomedb_target db:genomedb|GCF_003003255.1|WP_106205609.1 1 164 evalue:2.5e-50 qcov:98.20 identity:61.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF17886; PF04969; PF00011;
pfam_desc HSP20-like domain found in ArsA; CS domain; Hsp20/alpha crystallin family;
pfam_id ArsA_HSP20; CS; HSP20;
pfam_target db:Pfam-A.hmm|PF17886.1 evalue:4.4e-15 score:54.2 best_domain_score:53.6 name:ArsA_HSP20; db:Pfam-A.hmm|PF04969.16 evalue:2.3e-05 score:24.6 best_domain_score:23.5 name:CS; db:Pfam-A.hmm|PF00011.21 evalue:3.4e-23 score:81.0 best_domain_score:80.5 name:HSP20;
28224 27817 CDS
ID metaerg.pl|03001
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Amphiplicatus;s__Amphiplicatus metriothermophilus;
genomedb_acc GCF_900199215.1;
genomedb_target db:genomedb|GCF_900199215.1|WP_089411736.1 21 135 evalue:9.2e-32 qcov:85.20 identity:63.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00011;
pfam_desc Hsp20/alpha crystallin family;
pfam_id HSP20;
pfam_target db:Pfam-A.hmm|PF00011.21 evalue:2.4e-17 score:62.2 best_domain_score:61.9 name:HSP20;
28693 28253 CDS
ID metaerg.pl|03002
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Ensifer;s__Ensifer sp001429285;
genomedb_acc GCF_001429285.1;
genomedb_target db:genomedb|GCF_001429285.1|WP_057252152.1 1 145 evalue:4.2e-38 qcov:99.30 identity:54.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF17886; PF00011;
pfam_desc HSP20-like domain found in ArsA; Hsp20/alpha crystallin family;
pfam_id ArsA_HSP20; HSP20;
pfam_target db:Pfam-A.hmm|PF17886.1 evalue:4e-12 score:44.7 best_domain_score:44.3 name:ArsA_HSP20; db:Pfam-A.hmm|PF00011.21 evalue:1.7e-23 score:81.9 best_domain_score:81.7 name:HSP20;
28884 29717 CDS
ID metaerg.pl|03003
allgo_ids GO:0005216; GO:0006811; GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__SW121;s__SW121 sp003259155;
genomedb_acc GCF_003259155.1;
genomedb_target db:genomedb|GCF_003259155.1|WP_111640367.1 9 272 evalue:6.9e-90 qcov:95.30 identity:66.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00520; PF08016;
pfam_desc Ion transport protein; Polycystin cation channel;
pfam_id Ion_trans; PKD_channel;
pfam_target db:Pfam-A.hmm|PF00520.31 evalue:5.9e-45 score:152.6 best_domain_score:152.4 name:Ion_trans; db:Pfam-A.hmm|PF08016.12 evalue:9.8e-08 score:30.3 best_domain_score:29.5 name:PKD_channel;
tm_num 5;
28884 29717 transmembrane_helix
ID metaerg.pl|03004
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology o28941-29000i29037-29105o29148-29216i29277-29345o29487-29555i;
29946 30218 CDS
ID metaerg.pl|03005
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF11839;
pfam_desc Alanine-zipper, major outer membrane lipoprotein;
pfam_id Alanine_zipper;
pfam_target db:Pfam-A.hmm|PF11839.8 evalue:5e-09 score:35.6 best_domain_score:34.9 name:Alanine_zipper;
sp YES;
29946 30005 lipoprotein_signal_peptide
ID metaerg.pl|03006
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
31236 30244 CDS
ID metaerg.pl|03007
allec_ids 2.-.-.-;
allgo_ids GO:0016740; GO:0042597; GO:0016807; GO:0071972; GO:0016755; GO:0016757; GO:0044036; GO:0071555; GO:0043164; GO:0009252; GO:0008360;
allko_ids K19234;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Sedimenticola;s__Sedimenticola thiotaurini;
genomedb_acc GCF_001007875.1;
genomedb_target db:genomedb|GCF_001007875.1|WP_082117127.1 17 299 evalue:1.2e-88 qcov:85.80 identity:55.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id LIPA-CORESYN-PWY; LPSSYN-PWY;
metacyc_pathway_name lipid A-core biosynthesis (E. coli K-12);; superpathway of lipopolysaccharide biosynthesis;;
metacyc_pathway_type Glycan-Biosynthesis; Lipid-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;;
pfam_acc PF03734;
pfam_desc L,D-transpeptidase catalytic domain;
pfam_id YkuD;
pfam_target db:Pfam-A.hmm|PF03734.14 evalue:1.5e-15 score:57.1 best_domain_score:56.2 name:YkuD;
sp YES;
sprot_desc Probable L,D-transpeptidase YnhG;
sprot_id sp|P76193|YNHG_ECOLI;
sprot_target db:uniprot_sprot|sp|P76193|YNHG_ECOLI 15 302 evalue:2.1e-52 qcov:87.30 identity:40.30;
tm_num 1;
30244 30327 signal_peptide
ID metaerg.pl|03008
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
31236 30244 transmembrane_helix
ID metaerg.pl|03009
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i30280-30348o;
31337 32458 CDS
ID metaerg.pl|03010
allgo_ids GO:0016021; GO:0055085; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Marinobacter;s__Marinobacter gudaonensis;
genomedb_acc GCF_900115175.1;
genomedb_target db:genomedb|GCF_900115175.1|WP_091990853.1 2 369 evalue:7.8e-105 qcov:98.70 identity:59.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF03600;
pfam_desc Citrate transporter;
pfam_id CitMHS;
pfam_target db:Pfam-A.hmm|PF03600.16 evalue:7.8e-20 score:70.5 best_domain_score:70.5 name:CitMHS;
sprot_desc Inner membrane protein YbiR;
sprot_id sp|P75788|YBIR_ECOLI;
sprot_target db:uniprot_sprot|sp|P75788|YBIR_ECOLI 42 364 evalue:1.3e-53 qcov:86.60 identity:42.50;
tm_num 7;
31337 32458 transmembrane_helix
ID metaerg.pl|03011
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i31598-31666o31826-31894i31955-32059o32087-32155i32186-32254o32282-32350i32384-32452o;
32597 33361 CDS
ID metaerg.pl|03012
allgo_ids GO:0005737; GO:0008237;
allko_ids K09933;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax_A;s__Alcanivorax_A pacificus;
genomedb_acc GCF_000299335.2;
genomedb_target db:genomedb|GCF_000299335.2|WP_008738077.1 1 250 evalue:2.0e-88 qcov:98.40 identity:65.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF06167;
pfam_desc Glucose-regulated metallo-peptidase M90;
pfam_id Peptidase_M90;
pfam_target db:Pfam-A.hmm|PF06167.12 evalue:1.2e-80 score:269.9 best_domain_score:269.7 name:Peptidase_M90;
sprot_desc hypothetical protein;
sprot_id sp|A7FJD3|MTFA_YERP3;
sprot_target db:uniprot_sprot|sp|A7FJD3|MTFA_YERP3 5 250 evalue:2.6e-42 qcov:96.90 identity:36.10;
34500 33364 CDS
ID metaerg.pl|03013
allec_ids 1.13.12.-;
allgo_ids GO:0016491; GO:0005829; GO:0004314; GO:0018580; GO:0006633;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000075.1_108 1 371 evalue:9.8e-156 qcov:98.10 identity:75.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-5305;
metacyc_pathway_name bixin biosynthesis;;
metacyc_pathway_type APOCAROTENOID-SYN;;
pfam_acc PF01070; PF00478; PF03060;
pfam_desc FMN-dependent dehydrogenase; IMP dehydrogenase / GMP reductase domain; Nitronate monooxygenase;
pfam_id FMN_dh; IMPDH; NMO;
pfam_target db:Pfam-A.hmm|PF01070.18 evalue:9.8e-07 score:27.3 best_domain_score:26.6 name:FMN_dh; db:Pfam-A.hmm|PF00478.25 evalue:3.1e-07 score:28.9 best_domain_score:27.7 name:IMPDH; db:Pfam-A.hmm|PF03060.15 evalue:7.6e-68 score:228.6 best_domain_score:226.9 name:NMO;
sp YES;
sprot_desc Putative monooxygenase Rv1533;
sprot_id sp|O06179|Y1533_MYCTU;
sprot_target db:uniprot_sprot|sp|O06179|Y1533_MYCTU 3 362 evalue:6.8e-47 qcov:95.20 identity:34.60;
33364 33462 signal_peptide
ID metaerg.pl|03014
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
35003 34518 CDS
ID metaerg.pl|03015
allec_ids 1.5.1.37;
allgo_ids GO:0010181; GO:0016491;
allko_ids K00492;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR30748.1 1 158 evalue:1.3e-61 qcov:98.10 identity:72.20;
kegg_pathway_id 00680; 00350; 00360; 00340; 00903; 00361; 00120; 00150; 00624; 00622; 00626;
kegg_pathway_name Methane metabolism; Tyrosine metabolism; Phenylalanine metabolism; Histidine metabolism; Limonene and pinene degradation; gamma-Hexachlorocyclohexane degradation; Bile acid biosynthesis; Androgen and estrogen metabolism; 1- and 2-Methylnaphthalene degradation; Toluene and xylene degradation; Naphthalene and anthracene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01613;
pfam_desc Flavin reductase like domain;
pfam_id Flavin_Reduct;
pfam_target db:Pfam-A.hmm|PF01613.18 evalue:3.5e-37 score:127.1 best_domain_score:126.9 name:Flavin_Reduct;
sp YES;
sprot_desc Flavin reductase;
sprot_id sp|M4YFG7|FRED_PSEPU;
sprot_target db:uniprot_sprot|sp|M4YFG7|FRED_PSEPU 2 158 evalue:8.8e-36 qcov:97.50 identity:47.50;
34518 34622 signal_peptide
ID metaerg.pl|03016
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
35249 36442 CDS
ID metaerg.pl|03017
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005618; GO:0050660;
allko_ids K11731; K00249; K14448; K00248; K00253; K00120;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000071.1_54 1 397 evalue:5.4e-189 qcov:100.00 identity:78.60;
kegg_pathway_id 00626; 00280; 00624; 00632; 00361; 00903; 00410; 00071; 00650; 00640;
kegg_pathway_name Naphthalene and anthracene degradation; Valine, leucine and isoleucine degradation; 1- and 2-Methylnaphthalene degradation; Benzoate degradation via CoA ligation; gamma-Hexachlorocyclohexane degradation; Limonene and pinene degradation; beta-Alanine metabolism; Fatty acid metabolism; Butanoate metabolism; Propanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-2582; PWY-699; PWY-6544; CARNMET-PWY;
metacyc_pathway_name brassinosteroid biosynthesis II;; brassinosteroid biosynthesis I;; superpathway of C28 brassinosteroid biosynthesis;; L-carnitine degradation I;;
metacyc_pathway_type Brassinosteroid-Biosynthesis;; Brassinosteroid-Biosynthesis;; Super-Pathways;; CARN-DEG;;
pfam_acc PF00441; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:4.8e-19 score:68.3 best_domain_score:67.7 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF02770.19 evalue:1.4e-19 score:69.3 best_domain_score:68.6 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:3.5e-21 score:75.2 best_domain_score:73.6 name:Acyl-CoA_dh_N;
sprot_desc Putative acyl-CoA dehydrogenase FadE17;
sprot_id sp|P95280|ACD17_MYCTU;
sprot_target db:uniprot_sprot|sp|P95280|ACD17_MYCTU 2 396 evalue:4.3e-60 qcov:99.50 identity:36.30;
37522 36572 CDS
ID metaerg.pl|03018
allec_ids 1.1.1.-;
allgo_ids GO:0051287; GO:0055114; GO:0031406; GO:0070404; GO:0070402; GO:0016616; GO:0019752;
allko_ids K00018; K00058; K12972; K17064;
genomedb_OC d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__UBA5297;g__UBA10939;s__UBA10939 sp002408385;
genomedb_acc GCA_002408385.1;
genomedb_target db:genomedb|GCA_002408385.1|DHSB01000178.1_22 6 316 evalue:3.4e-69 qcov:98.40 identity:48.30;
kegg_pathway_id 00260; 00630;
kegg_pathway_name Glycine, serine and threonine metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-321; LYSDEGII-PWY; CENTBENZCOA-PWY; 4TOLCARBDEG-PWY; PWY-6419; SUCROSEUTIL2-PWY; PWY-1186; PWY1A0-6325; PWY-6516; PWY-5789; PWY-481; PWY-882; PWY-5327; PWY-6577; TOLSULFDEG-PWY; ECASYN-PWY; PWY-5048; PWY-5466; PWY-5972; PWY-5195; PWY-6501; PWY-5197; BENZCOA-PWY; PWY-5184; P302-PWY; PWY-5516; PWY-5392; PWY-6575;
metacyc_pathway_name cutin biosynthesis;; L-lysine degradation III;; benzoyl-CoA degradation II (anaerobic);; 4-toluenecarboxylate degradation;; shikimate degradation II;; sucrose degradation VII (sucrose 3-dehydrogenase);; L-homomethionine biosynthesis;; actinorhodin biosynthesis;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; ethylbenzene degradation (anaerobic);; L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of L-lysine degradation;; farnesylcysteine salvage pathway;; 4-toluenesulfonate degradation I;; enterobacterial common antigen biosynthesis;; rosmarinic acid biosynthesis I;; matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);; artemisinin and arteannuin B biosynthesis;; D-glucuronate degradation II;; lactate biosynthesis (archaea);; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; L-sorbose degradation;; D-xylose degradation II;; reductive TCA cycle II;; juvenile hormone III biosynthesis I;;
metacyc_pathway_type EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; LYSINE-DEG;; Benzoyl-CoA-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; Shikimate-Degradation;; SUCROSE-DEG;; Other-Amino-Acid-Biosynthesis;; Antibiotic-Biosynthesis;; Sugar-Derivatives; Super-Pathways;; Autotrophic-CO2-Fixation;; AROMATIC-COMPOUNDS-DEGRADATION;; Ascorbate-Biosynthesis;; LYSINE-DEG; Super-Pathways;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; 4-Toluenesulfonate-Degradation;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Rosmarinate-Biosynthesis;; LIGNAN-SYN;; Stearate-Biosynthesis;; SESQUITERPENE-LACTONE;; D-Glucuronate-Degradation;; Energy-Metabolism;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Sugars-And-Polysaccharides-Degradation;; Xylose-Degradation;; Reductive-TCA-Cycles;; HORMONE-SYN; JH-III-Biosynthesis;;
pfam_acc PF02826; PF07991; PF03446;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; Acetohydroxy acid isomeroreductase, NADPH-binding domain; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id 2-Hacid_dh_C; IlvN; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:1.1e-46 score:157.6 best_domain_score:157.3 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF07991.12 evalue:5.6e-05 score:22.0 best_domain_score:21.5 name:IlvN; db:Pfam-A.hmm|PF03446.15 evalue:4.4e-06 score:26.2 best_domain_score:25.5 name:NAD_binding_2;
sprot_desc D-2-hydroxyacid dehydrogenase;
sprot_id sp|Q2VEQ7|DDH_HALMT;
sprot_target db:uniprot_sprot|sp|Q2VEQ7|DDH_HALMT 29 310 evalue:1.3e-35 qcov:89.20 identity:33.60;
37667 38185 CDS
ID metaerg.pl|03019
allec_ids 1.3.99.16;
allgo_ids GO:0009055; GO:0051536; GO:0051537; GO:0047121; GO:0046872;
allko_ids K13483; K00087; K00106; K03518; K13482; K13481; K07302;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Palsa-883;s__Palsa-883 sp003151425;
genomedb_acc GCA_003151425.1;
genomedb_target db:genomedb|GCA_003151425.1|PLXO01000198.1_2 1 149 evalue:3.4e-63 qcov:86.60 identity:75.20;
kegg_pathway_id 00983; 00633; 00230; 00680;
kegg_pathway_name Drug metabolism - other enzymes; Trinitrotoluene degradation; Purine metabolism; Methane metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00111; PF01799;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain;
pfam_id Fer2; Fer2_2;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:1.1e-07 score:30.9 best_domain_score:29.6 name:Fer2; db:Pfam-A.hmm|PF01799.20 evalue:1.6e-27 score:94.6 best_domain_score:94.6 name:Fer2_2;
sprot_desc Isoquinoline 1-oxidoreductase subunit alpha;
sprot_id sp|Q51697|IORA_BREDI;
sprot_target db:uniprot_sprot|sp|Q51697|IORA_BREDI 1 146 evalue:2.8e-48 qcov:84.90 identity:59.50;
38189 40372 CDS
ID metaerg.pl|03020
allec_ids 1.3.99.16;
allgo_ids GO:0016491; GO:0055114; GO:0047121;
allko_ids K03520; K00157; K00087; K00106; K11178; K03518; K11177; K13482; K13481; K07303;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Pseudaminobacter;s__Pseudaminobacter soli;
genomedb_acc GCF_003012705.1;
genomedb_target db:genomedb|GCF_003012705.1|WP_106725278.1 5 725 evalue:1.3e-212 qcov:99.20 identity:52.10;
kegg_pathway_id 00380; 00230; 00983; 00280; 00350; 00680; 00633; 00760; 00750;
kegg_pathway_name Tryptophan metabolism; Purine metabolism; Drug metabolism - other enzymes; Valine, leucine and isoleucine degradation; Tyrosine metabolism; Methane metabolism; Trinitrotoluene degradation; Nicotinate and nicotinamide metabolism; Vitamin B6 metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF02738;
pfam_desc Molybdopterin-binding domain of aldehyde dehydrogenase;
pfam_id Ald_Xan_dh_C2;
pfam_target db:Pfam-A.hmm|PF02738.18 evalue:1.5e-64 score:217.6 best_domain_score:116.5 name:Ald_Xan_dh_C2;
sp YES;
sprot_desc Isoquinoline 1-oxidoreductase subunit beta;
sprot_id sp|Q51698|IORB_BREDI;
sprot_target db:uniprot_sprot|sp|Q51698|IORB_BREDI 4 719 evalue:6.1e-76 qcov:98.50 identity:29.70;
38189 38281 signal_peptide
ID metaerg.pl|03021
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
40386 40733 CDS
ID metaerg.pl|03022
allgo_ids GO:0009055; GO:0020037;
allko_ids K00428; K05301;
kegg_pathway_id 00920;
kegg_pathway_name Sulfur metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00034;
pfam_desc Cytochrome c;
pfam_id Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF00034.21 evalue:1.7e-05 score:25.1 best_domain_score:23.5 name:Cytochrom_C;
sp YES;
40386 40451 signal_peptide
ID metaerg.pl|03023
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
40724 42022 CDS
ID metaerg.pl|03024
allec_ids 1.8.2.3;
allgo_ids GO:0016491; GO:0050660; GO:0055114; GO:0042597;
allko_ids K17229;
genomedb_OC d__Bacteria;p__Binatota;c__Binatia;o__Bin18;f__Bin18;g__Bin18;s__Bin18 sp002238415;
genomedb_acc GCA_002238415.1;
genomedb_target db:genomedb|GCA_002238415.1|MPMI01000016.1_53 12 431 evalue:2.0e-120 qcov:97.20 identity:53.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF09242; PF07992;
pfam_desc Flavocytochrome c sulphide dehydrogenase, flavin-binding; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id FCSD-flav_bind; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF09242.11 evalue:5.3e-19 score:67.6 best_domain_score:66.2 name:FCSD-flav_bind; db:Pfam-A.hmm|PF07992.14 evalue:1.8e-14 score:52.9 best_domain_score:44.1 name:Pyr_redox_2;
sp YES;
sprot_desc Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain;
sprot_id sp|Q06530|DHSU_ALLVD;
sprot_target db:uniprot_sprot|sp|Q06530|DHSU_ALLVD 10 431 evalue:4.1e-88 qcov:97.70 identity:41.70;
40724 40834 signal_peptide
ID metaerg.pl|03025
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
42019 42555 CDS
ID metaerg.pl|03026
allgo_ids GO:0009055; GO:0020037;
allko_ids K05301;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Roseomonas_A;s__Roseomonas_A sp003173615;
genomedb_acc GCF_003173615.1;
genomedb_target db:genomedb|GCF_003173615.1|WP_109869849.1 13 155 evalue:4.5e-26 qcov:80.30 identity:48.30;
kegg_pathway_id 00920;
kegg_pathway_name Sulfur metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00034;
pfam_desc Cytochrome c;
pfam_id Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF00034.21 evalue:0.00013 score:22.2 best_domain_score:21.5 name:Cytochrom_C;
sp YES;
tigrfam_acc TIGR04485;
tigrfam_desc sulfur oxidation c-type cytochrome SoxX;
tigrfam_name thiosulf_SoxX;
tigrfam_target db:TIGRFAMs.hmm|TIGR04485 evalue:3.1e-17 score:62.2 best_domain_score:61.6 name:TIGR04485;
42019 42093 signal_peptide
ID metaerg.pl|03027
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
42552 43079 CDS
ID metaerg.pl|03028
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Palsa-1005;g__PALSA-1005;s__PALSA-1005 sp003153335;
genomedb_acc GCA_003153335.1;
genomedb_target db:genomedb|GCA_003153335.1|PLYG01000024.1_8 14 169 evalue:5.6e-13 qcov:89.10 identity:36.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF13501;
pfam_desc Sulfur oxidation protein SoxY;
pfam_id SoxY;
pfam_target db:Pfam-A.hmm|PF13501.6 evalue:2.8e-19 score:68.6 best_domain_score:68.3 name:SoxY;
sp YES;
42552 42686 signal_peptide
ID metaerg.pl|03029
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
43076 43405 CDS
ID metaerg.pl|03030
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Roseateles;s__Roseateles sp900109745;
genomedb_acc GCF_900109745.1;
genomedb_target db:genomedb|GCF_900109745.1|WP_092948853.1 6 106 evalue:2.6e-24 qcov:92.70 identity:53.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF08770;
pfam_desc Sulphur oxidation protein SoxZ;
pfam_id SoxZ;
pfam_target db:Pfam-A.hmm|PF08770.11 evalue:9.9e-26 score:88.6 best_domain_score:88.3 name:SoxZ;
tigrfam_acc TIGR04490;
tigrfam_desc thiosulfate oxidation carrier complex protein SoxZ;
tigrfam_name SoxZ_true;
tigrfam_target db:TIGRFAMs.hmm|TIGR04490 evalue:9.4e-24 score:82.4 best_domain_score:82.1 name:TIGR04490;
43402 44172 CDS
ID metaerg.pl|03031
allec_ids 2.8.5.2;
allgo_ids GO:0070069; GO:0042597; GO:0009055; GO:0020037; GO:0046872; GO:0016491; GO:0016669; GO:0046982; GO:0016783; GO:0018192; GO:0055114; GO:0019418; GO:0019417;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia;s__Devosia sp001185205;
genomedb_acc GCF_001185205.1;
genomedb_target db:genomedb|GCF_001185205.1|WP_053167691.1 4 256 evalue:2.9e-74 qcov:98.80 identity:55.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF09086;
pfam_desc Domain of unknown function (DUF1924);
pfam_id DUF1924;
pfam_target db:Pfam-A.hmm|PF09086.11 evalue:4.7e-06 score:26.1 best_domain_score:13.5 name:DUF1924;
sp YES;
sprot_desc L-cysteine S-thiosulfotransferase subunit SoxA;
sprot_id sp|Q939U1|SOXA_RHOSU;
sprot_target db:uniprot_sprot|sp|Q939U1|SOXA_RHOSU 11 255 evalue:4.8e-44 qcov:95.70 identity:38.10;
tigrfam_acc TIGR04484;
tigrfam_desc sulfur oxidation c-type cytochrome SoxA;
tigrfam_name thiosulf_SoxA;
tigrfam_target db:TIGRFAMs.hmm|TIGR04484 evalue:2.5e-62 score:209.1 best_domain_score:208.9 name:TIGR04484;
43402 43467 signal_peptide
ID metaerg.pl|03032
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
44223 45338 CDS
ID metaerg.pl|03033
allec_ids 5.1.3.3;
allgo_ids GO:0005975; GO:0016853; GO:0005737; GO:0004034; GO:0030246; GO:0033499; GO:0006006;
allko_ids K01785;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000125.1_5 25 371 evalue:1.4e-74 qcov:93.50 identity:44.90;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-5114; PWY66-373; PWY-6317; PWY-2221; NPGLUCAT-PWY;
metacyc_pathway_name UDP-sugars interconversion;; sucrose degradation V (sucrose α-glucosidase);; D-galactose degradation I (Leloir pathway);; Entner-Doudoroff pathway III (semi-phosphorylative);; Entner-Doudoroff pathway II (non-phosphorylative);;
metacyc_pathway_type Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; SUCROSE-DEG;; GALACTOSE-DEGRADATION;; Entner-Duodoroff-Pathways;; Entner-Duodoroff-Pathways;;
pfam_acc PF01263;
pfam_desc Aldose 1-epimerase;
pfam_id Aldose_epim;
pfam_target db:Pfam-A.hmm|PF01263.20 evalue:5e-70 score:235.4 best_domain_score:234.7 name:Aldose_epim;
sprot_desc Aldose 1-epimerase;
sprot_id sp|Q5EA79|GALM_BOVIN;
sprot_target db:uniprot_sprot|sp|Q5EA79|GALM_BOVIN 28 371 evalue:3.7e-53 qcov:92.70 identity:37.40;
45936 45367 CDS
ID metaerg.pl|03034
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Nitrospinota;c__Nitrospinia;o__Nitrospinales;f__Nitrospinaceae;g__SZUA-259;s__SZUA-259 sp003246675;
genomedb_acc GCA_003246675.1;
genomedb_target db:genomedb|GCA_003246675.1|QJZQ01000025.1_5 3 188 evalue:6.8e-57 qcov:98.40 identity:60.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF02525; PF03358;
pfam_desc Flavodoxin-like fold; NADPH-dependent FMN reductase;
pfam_id Flavodoxin_2; FMN_red;
pfam_target db:Pfam-A.hmm|PF02525.17 evalue:4.8e-32 score:110.5 best_domain_score:110.4 name:Flavodoxin_2; db:Pfam-A.hmm|PF03358.15 evalue:2.1e-09 score:36.5 best_domain_score:36.3 name:FMN_red;
46521 45976 CDS
ID metaerg.pl|03035
genomedb_OC d__Bacteria;p__Myxococcota;c__UBA9160;o__UBA9160;f__UBA4427;g__UBA4427;s__UBA4427 sp002719955;
genomedb_acc GCA_002719955.1;
genomedb_target db:genomedb|GCA_002719955.1|MBJ21748.1 4 169 evalue:2.3e-46 qcov:91.70 identity:54.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00903;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:4.5e-15 score:55.2 best_domain_score:54.7 name:Glyoxalase;
46663 47262 CDS
ID metaerg.pl|03036
allgo_ids GO:0016021; GO:0005886;
allko_ids K03744;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000075.1_105 3 198 evalue:1.6e-69 qcov:98.50 identity:73.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF04011;
pfam_desc LemA family;
pfam_id LemA;
pfam_target db:Pfam-A.hmm|PF04011.12 evalue:1.3e-51 score:173.6 best_domain_score:173.3 name:LemA;
sprot_desc hypothetical protein;
sprot_id sp|A8AVK0|LEMA_STRGC;
sprot_target db:uniprot_sprot|sp|A8AVK0|LEMA_STRGC 3 198 evalue:2.1e-26 qcov:98.50 identity:41.80;
tm_num 1;
46663 47262 transmembrane_helix
ID metaerg.pl|03037
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology o46675-46743i;
47291 49315 CDS
ID metaerg.pl|03038
allgo_ids GO:0004222; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000075.1_104 1 669 evalue:2.0e-143 qcov:99.30 identity:49.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:4.1e-28 score:97.7 best_domain_score:96.7 name:Peptidase_M48;
tm_num 5;
47291 49315 transmembrane_helix
ID metaerg.pl|03039
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i47339-47407o47465-47533i47861-47920o47978-48046i48446-48505o;
49395 50996 CDS
ID metaerg.pl|03040
allec_ids 3.6.1.11;
allgo_ids GO:0005886; GO:0004309; GO:0006793;
allko_ids K01514; K01524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR32267.1 30 520 evalue:1.4e-139 qcov:92.10 identity:54.60;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF02541;
pfam_desc Ppx/GppA phosphatase family;
pfam_id Ppx-GppA;
pfam_target db:Pfam-A.hmm|PF02541.16 evalue:2.1e-76 score:256.3 best_domain_score:255.9 name:Ppx-GppA;
sprot_desc Exopolyphosphatase;
sprot_id sp|Q9S605|PPX_PSEAI;
sprot_target db:uniprot_sprot|sp|Q9S605|PPX_PSEAI 18 520 evalue:6.6e-112 qcov:94.40 identity:43.80;
tigrfam_acc TIGR03706;
tigrfam_desc exopolyphosphatase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name exo_poly_only;
tigrfam_sub1role Phosphorus compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR03706 evalue:1e-93 score:313.1 best_domain_score:312.7 name:TIGR03706;
53086 51011 CDS
ID metaerg.pl|03041
allec_ids 2.7.4.1;
allgo_ids GO:0009358; GO:0005524; GO:0046872; GO:0008976; GO:0006799;
allko_ids K00937;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__UBA7966;f__UBA7966;g__USCg-Taylor;s__USCg-Taylor sp002007425;
genomedb_acc GCA_002007425.1;
genomedb_target db:genomedb|GCA_002007425.1|OOO02392.1 3 690 evalue:5.9e-292 qcov:99.60 identity:71.80;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF13091; PF02503; PF13090; PF17941; PF13089;
pfam_desc PLD-like domain; Polyphosphate kinase middle domain; Polyphosphate kinase C-terminal domain 2; Polyphosphate kinase C-terminal domain 1; Polyphosphate kinase N-terminal domain;
pfam_id PLDc_2; PP_kinase; PP_kinase_C; PP_kinase_C_1; PP_kinase_N;
pfam_target db:Pfam-A.hmm|PF13091.6 evalue:2.2e-14 score:52.7 best_domain_score:32.6 name:PLDc_2; db:Pfam-A.hmm|PF02503.17 evalue:1.9e-64 score:216.2 best_domain_score:215.1 name:PP_kinase; db:Pfam-A.hmm|PF13090.6 evalue:7.8e-69 score:229.8 best_domain_score:225.5 name:PP_kinase_C; db:Pfam-A.hmm|PF17941.1 evalue:5.6e-75 score:249.7 best_domain_score:245.3 name:PP_kinase_C_1; db:Pfam-A.hmm|PF13089.6 evalue:1.7e-37 score:127.3 best_domain_score:125.8 name:PP_kinase_N;
sprot_desc Polyphosphate kinase;
sprot_id sp|P0DP44|PPK1_PSEAE;
sprot_target db:uniprot_sprot|sp|P0DP44|PPK1_PSEAE 6 688 evalue:3.8e-237 qcov:98.80 identity:58.90;
tigrfam_acc TIGR03705;
tigrfam_desc polyphosphate kinase 1;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name poly_P_kin;
tigrfam_sub1role Phosphorus compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR03705 evalue:4.2e-297 score:986.3 best_domain_score:986.1 name:TIGR03705;
53235 53981 CDS
ID metaerg.pl|03042
allec_ids 2.1.3.-; 2.1.1.-;
allgo_ids GO:0008168; GO:0016743; GO:1904047; GO:0002098;
allko_ids K00599; K15256;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylogaea;s__Methylogaea oryzae;
genomedb_acc GCF_001312345.1;
genomedb_target db:genomedb|GCF_001312345.1|WP_054774166.1 8 247 evalue:6.2e-58 qcov:96.80 identity:51.20;
kegg_pathway_id 00626; 00450; 00350; 00340; 00380; 00150;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tyrosine metabolism; Histidine metabolism; Tryptophan metabolism; Androgen and estrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id METH-ACETATE-PWY; PWY-5856; PWY-6142; UBISYN-PWY; PWY-6154; PWY-6424; PWY-5855; PWY-5209; PWY-6151; PWY-6303; PWY-5857; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6146; PWY-6395; PWY-6427; PWY-5987; PWY-5479; PWY-6292; CO2FORM-PWY; PWY-5116; PWY-1581; METHIONINE-DEG1-PWY; PWY-5328; PWY-5773; PWY-6519; PWY-5041; PWY-4021; PWY-3542; ALL-CHORISMATE-PWY; PWY-6153; PWY-5467; PWY-6477; PWY-6442; PWY-6575; CODH-PWY; PWY-5305; PWYG-321; PWY-6113; PWY-5729; PWY-1422; PWY-1061; PWY-5876; PWY-5975; PWY-5864;
metacyc_pathway_name methanogenesis from acetate;; ubiquinol-9 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; xanthohumol biosynthesis;; biotin biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of seleno-compound metabolism;; rot-2'-enonate biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; choline biosynthesis II;; superpathway of chorismate metabolism;; autoinducer AI-2 biosynthesis I;; gramine biosynthesis;; gibberellin inactivation II (methylation);; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; bixin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; vitamin E biosynthesis (tocopherols);; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;;
metacyc_pathway_type METHANOGENESIS;; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Super-Pathways; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Rotenoids-Biosynthesis;; QUINONE-SYN;; LIGNAN-SYN;; CYSTEINE-SYN; Super-Pathways;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; Choline-Biosynthesis;; Super-Pathways;; Autoinducer-Biosynthesis;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Autotrophic-CO2-Fixation;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF08241; PF08242; PF13649; PF13847;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_25; Methyltransf_31;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:2.3e-10 score:40.2 best_domain_score:39.6 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.5e-07 score:31.3 best_domain_score:30.7 name:Methyltransf_12; db:Pfam-A.hmm|PF13649.6 evalue:7e-11 score:41.9 best_domain_score:41.1 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.1e-07 score:31.0 best_domain_score:30.6 name:Methyltransf_31;
sprot_desc Carboxy-S-adenosyl-L-methionine synthase;
sprot_id sp|Q2SJW0|CMOA_HAHCH;
sprot_target db:uniprot_sprot|sp|Q2SJW0|CMOA_HAHCH 5 247 evalue:1.4e-56 qcov:98.00 identity:48.40;
tigrfam_acc TIGR00740;
tigrfam_desc tRNA (cmo5U34)-methyltransferase;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00740;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00740 evalue:2.2e-65 score:219.9 best_domain_score:219.7 name:TIGR00740;
53978 54982 CDS
ID metaerg.pl|03043
allec_ids 2.5.1.-; 2.1.1.-;
allgo_ids GO:0008168; GO:0016765; GO:0002098;
allko_ids K00599; K15257;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalobacterales;f__Thiohalobacteraceae;g__Thiohalobacter;s__Thiohalobacter sp002699185;
genomedb_acc GCA_002699185.1;
genomedb_target db:genomedb|GCA_002699185.1|MAT64795.1 8 331 evalue:1.5e-86 qcov:97.00 identity:52.90;
kegg_pathway_id 00380; 00340; 00150; 00350; 00450; 00626;
kegg_pathway_name Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism; Tyrosine metabolism; Selenoamino acid metabolism; Naphthalene and anthracene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id METH-ACETATE-PWY; UBISYN-PWY; PWY-6424; PWY-6154; PWY-5897; PWY-5808; PWY-5132; PWY-5805; PWY-6146; PWY-6427; PWY-6404; BIOTIN-BIOSYNTHESIS-PWY; PWY-5140; PWY-5987; PWY-5701; CO2FORM-PWY; PWY-5116; PWY-5896; PWY-5773; PWY-5816; PWY-6519; METHIONINE-DEG1-PWY; PWY-4021; PWY-6153; ALL-CHORISMATE-PWY; PWY-6520; PWY-5134; PWY-6575; PWY-5899; PWY-6113; PWY-1422; PWY-1061; PWY-5975; PWY-6263; PWY-6142; PWY-5856; POLYISOPRENSYN-PWY; PWY-5855; PWY-5209; PWY-5783; PWY-6151; PWY-6303; PWY-6262; PWY-5857; PWY-724; PWY-5861; PWY-5806; PWY-6395; PWY-5135; PWY-6292; PWY-5479; PWY-2681; PWY-5068; PWY-1581; PWY-5845; PWY-5862; PWY-5863; PWY-5898; PWY-5328; PWY-6403; PWY-5041; PWY-3542; PWY-5817; PWY-5467; PWY-6477; PWY-6442; CODH-PWY; PWY-4502; PWY-5064; PWY-5838; PWY-5729; PWYG-321; PWY-5305; PWY-5027; PWY-5893; PWY-6383; PWY-5876; PWY-6129; PWY-5864; PWY-5133;
metacyc_pathway_name methanogenesis from acetate;; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of menaquinol-11 biosynthesis;; hyperforin and adhyperforin biosynthesis;; lupulone and humulone biosynthesis;; nonaprenyl diphosphate biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; biotin biosynthesis I;; cannabinoid biosynthesis;; sorgoleone biosynthesis;; shikonin biosynthesis;; methanogenesis from methanol;; sakuranetin biosynthesis;; superpathway of menaquinol-10 biosynthesis;; gossypol biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; L-methionine degradation I (to L-homocysteine);; β-alanine betaine biosynthesis;; autoinducer AI-2 biosynthesis I;; superpathway of chorismate metabolism;; nonaprenyl diphosphate biosynthesis II;; superpathway of bitter acids biosynthesis;; juvenile hormone III biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; superpathway of mycolate biosynthesis;; vitamin E biosynthesis (tocopherols);; homogalacturonan biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; polyisoprenoid biosynthesis (E. coli);; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; octaprenyl diphosphate biosynthesis;; S-adenosyl-L-methionine cycle I;; methyl indole-3-acetate interconversion;; demethylmenaquinol-8 biosynthesis II;; ubiquinol-10 biosynthesis (prokaryotic);; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of seleno-compound metabolism;; xanthohumol biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; trans-zeatin biosynthesis;; chlorophyll cycle;; plastoquinol-9 biosynthesis I;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-12 biosynthesis;; superpathway of L-methionine salvage and degradation;; carrageenan biosynthesis;; S-adenosyl-L-methionine cycle II;; choline biosynthesis II;; dodecaprenyl diphosphate biosynthesis;; gramine biosynthesis;; gibberellin inactivation II (methylation);; spermidine hydroxycinnamic acid conjugates biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; wighteone and luteone biosynthesis;; chlorophyll a biosynthesis II;; superpathway of menaquinol-8 biosynthesis I;; vestitol and sativan biosynthesis;; mycolate biosynthesis;; bixin biosynthesis;; phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; magnoflorine biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; superpathway of plastoquinol biosynthesis;; colupulone and cohumulone biosynthesis;;
metacyc_pathway_type METHANOGENESIS;; Super-Pathways; Ubiquinone-Biosynthesis;; ; Autoinducer-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; QUINONE-SYN;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Menaquinone-Biosynthesis; Super-Pathways;; SESQUITERPENOID-SYN;; Polyprenyl-Biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;; METHIONINE-DEG;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; Autoinducer-Biosynthesis;; Super-Pathways;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Polyprenyl-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Auxin-Biosynthesis; Interconversion;; Demethylmenaquinol-8-Biosynthesis;; Ubiquinone-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; PRENYLFLAVONOID-SYN;; CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; CYTOKININ-BIOSYNTHESIS;; Chlorophyll-a-Biosynthesis;; Plastoquinone-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; METHIONINE-DEG; Super-Pathways;; Polysaccharides-Biosynthesis;; S-adenosyl-L-methionine-cycle;; Choline-Biosynthesis;; Polyprenyl-Biosynthesis;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; N-CONTAINING-SECONDARY-CMPD-SYN;; Autotrophic-CO2-Fixation;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis;; APOCAROTENOID-SYN;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Lipid-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;;
pfam_acc PF08241; PF13489; PF13649; PF13847; PF08003;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Protein of unknown function (DUF1698);
pfam_id Methyltransf_11; Methyltransf_23; Methyltransf_25; Methyltransf_31; Methyltransf_9;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:5.7e-10 score:39.0 best_domain_score:37.6 name:Methyltransf_11; db:Pfam-A.hmm|PF13489.6 evalue:2.6e-14 score:52.6 best_domain_score:52.0 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.2e-09 score:38.0 best_domain_score:36.7 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:6.2e-09 score:35.1 best_domain_score:31.1 name:Methyltransf_31; db:Pfam-A.hmm|PF08003.11 evalue:1.8e-103 score:345.0 best_domain_score:344.7 name:Methyltransf_9;
sprot_desc tRNA U34 carboxymethyltransferase;
sprot_id sp|C1DQS9|CMOB_AZOVD;
sprot_target db:uniprot_sprot|sp|C1DQS9|CMOB_AZOVD 5 329 evalue:2.8e-84 qcov:97.30 identity:54.00;
tigrfam_acc TIGR00452;
tigrfam_desc tRNA (mo5U34)-methyltransferase;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00452;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00452 evalue:2.3e-115 score:383.9 best_domain_score:383.7 name:TIGR00452;
55095 55466 CDS
ID metaerg.pl|03044
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000071.1_47 5 117 evalue:2.6e-17 qcov:91.90 identity:42.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
tm_num 1;
55095 55466 transmembrane_helix
ID metaerg.pl|03045
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i55383-55451o;
55472 56632 CDS
ID metaerg.pl|03046
allec_ids 1.3.8.14;
allgo_ids GO:0016627; GO:0055114; GO:0050660; GO:0017000;
allko_ids K00249; K11731; K06446; K00253; K00248; K00120; K14448; K21782;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000071.1_46 1 386 evalue:4.6e-100 qcov:100.00 identity:53.00;
kegg_pathway_id 00650; 00640; 00410; 00071; 00903; 00361; 00930; 00632; 00280; 00624; 00626;
kegg_pathway_name Butanoate metabolism; Propanoate metabolism; beta-Alanine metabolism; Fatty acid metabolism; Limonene and pinene degradation; gamma-Hexachlorocyclohexane degradation; Caprolactam degradation; Benzoate degradation via CoA ligation; Valine, leucine and isoleucine degradation; 1- and 2-Methylnaphthalene degradation; Naphthalene and anthracene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:5.2e-31 score:107.1 best_domain_score:106.5 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:2.5e-10 score:40.0 best_domain_score:38.5 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:5.8e-09 score:35.3 best_domain_score:33.8 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:4.6e-08 score:33.0 best_domain_score:31.9 name:Acyl-CoA_dh_N;
sprot_desc L-prolyl-[peptidyl-carrier protein] dehydrogenase;
sprot_id sp|Q5W271|PIGA_SERS3;
sprot_target db:uniprot_sprot|sp|Q5W271|PIGA_SERS3 1 376 evalue:1.4e-07 qcov:97.40 identity:24.30;
57470 56676 CDS
ID metaerg.pl|03047
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2965;s__UBA2965 sp002348385;
genomedb_acc GCA_002348385.1;
genomedb_target db:genomedb|GCA_002348385.1|DEBD01000027.1_18 14 258 evalue:9.5e-81 qcov:92.80 identity:61.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF05721;
pfam_desc Phytanoyl-CoA dioxygenase (PhyH);
pfam_id PhyH;
pfam_target db:Pfam-A.hmm|PF05721.13 evalue:5.8e-28 score:97.8 best_domain_score:96.3 name:PhyH;
57678 58226 CDS
ID metaerg.pl|03048
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
sp YES;
tm_num 1;
57678 57755 signal_peptide
ID metaerg.pl|03049
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
57678 58226 transmembrane_helix
ID metaerg.pl|03050
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i57696-57764o;
58310 58852 CDS
ID metaerg.pl|03051
allgo_ids GO:0005515;
allko_ids K01768; K09571; K05864; K08884; K09667; K01802; K09574; K04460;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2965;s__UBA2965 sp002348385;
genomedb_acc GCA_002348385.1;
genomedb_target db:genomedb|GCA_002348385.1|DEBD01000026.1_15 5 180 evalue:1.1e-19 qcov:97.80 identity:37.90;
kegg_pathway_id 04010; 00230; 04020; 05012; 01030;
kegg_pathway_name MAPK signaling pathway; Purine metabolism; Calcium signaling pathway; Parkinson's disease; Glycan structures - biosynthesis 1;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00515; PF13374; PF13424; PF13428; PF13429; PF13432; PF13431; PF14559; PF07719; PF13181;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_10; TPR_12; TPR_14; TPR_15; TPR_16; TPR_17; TPR_19; TPR_2; TPR_8;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:6.3e-22 score:75.7 best_domain_score:33.9 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:6e-09 score:34.7 best_domain_score:19.7 name:TPR_10; db:Pfam-A.hmm|PF13424.6 evalue:2.9e-11 score:42.7 best_domain_score:23.6 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:4.8e-07 score:29.3 best_domain_score:16.3 name:TPR_14; db:Pfam-A.hmm|PF13429.6 evalue:2.3e-07 score:29.5 best_domain_score:18.0 name:TPR_15; db:Pfam-A.hmm|PF13432.6 evalue:1.1e-08 score:34.8 best_domain_score:23.3 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:1e-07 score:31.1 best_domain_score:10.5 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:5.1e-08 score:32.6 best_domain_score:18.3 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:2.3e-18 score:64.0 best_domain_score:27.9 name:TPR_2; db:Pfam-A.hmm|PF13181.6 evalue:1.5e-11 score:42.8 best_domain_score:19.1 name:TPR_8;
sp YES;
58310 58372 signal_peptide
ID metaerg.pl|03052
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
60366 58918 CDS
ID metaerg.pl|03053
allec_ids 1.2.1.68;
allgo_ids GO:0016491; GO:0055114; GO:0050269; GO:0006081;
allko_ids K00128; K00154;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000071.1_43 8 481 evalue:1.5e-196 qcov:98.30 identity:70.70;
kegg_pathway_id 00280; 00010; 00310; 00340; 00631; 00410; 00071; 00641; 00380; 00120; 00220; 00903; 00620; 00561; 00650; 00640;
kegg_pathway_name Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Lysine degradation; Histidine metabolism; 1,2-Dichloroethane degradation; beta-Alanine metabolism; Fatty acid metabolism; 3-Chloroacrylic acid degradation; Tryptophan metabolism; Bile acid biosynthesis; Urea cycle and metabolism of amino groups; Limonene and pinene degradation; Pyruvate metabolism; Glycerolipid metabolism; Butanoate metabolism; Propanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-5168;
metacyc_pathway_name ferulate and sinapate biosynthesis;;
metacyc_pathway_type CINNAMATE-SYN;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:9.9e-87 score:290.6 best_domain_score:290.4 name:Aldedh;
sprot_desc Probable coniferyl aldehyde dehydrogenase;
sprot_id sp|Q9A777|CALB_CAUVC;
sprot_target db:uniprot_sprot|sp|Q9A777|CALB_CAUVC 14 482 evalue:3.2e-174 qcov:97.30 identity:63.60;
61551 60478 CDS
ID metaerg.pl|03054
allgo_ids GO:0016788;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax dieselolei;
genomedb_acc GCF_000300005.1;
genomedb_target db:genomedb|GCF_000300005.1|WP_014995589.1 7 357 evalue:5.7e-121 qcov:98.30 identity:62.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF04952;
pfam_desc Succinylglutamate desuccinylase / Aspartoacylase family;
pfam_id AstE_AspA;
pfam_target db:Pfam-A.hmm|PF04952.14 evalue:1.9e-59 score:200.3 best_domain_score:200.1 name:AstE_AspA;
62461 61556 CDS
ID metaerg.pl|03055
allec_ids 6.3.2.-;
allgo_ids GO:0005524; GO:0046872; GO:0016881; GO:0006464; GO:0006412;
allko_ids K05844;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Marinospirillum;s__Marinospirillum alkaliphilum;
genomedb_acc GCF_900119735.1;
genomedb_target db:genomedb|GCF_900119735.1|WP_072326514.1 1 301 evalue:4.9e-134 qcov:100.00 identity:80.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-6455;
metacyc_pathway_name vancomycin resistance II;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Vancomycin-Resistnace;;
pfam_acc PF02655; PF02955; PF08443; PF18030;
pfam_desc ATP-grasp domain; Prokaryotic glutathione synthetase, ATP-grasp domain; RimK-like ATP-grasp domain; RimK PreATP-grasp domain;
pfam_id ATP-grasp_3; GSH-S_ATP; RimK; Rimk_N;
pfam_target db:Pfam-A.hmm|PF02655.14 evalue:1.3e-07 score:31.0 best_domain_score:30.3 name:ATP-grasp_3; db:Pfam-A.hmm|PF02955.16 evalue:1.1e-16 score:59.9 best_domain_score:59.4 name:GSH-S_ATP; db:Pfam-A.hmm|PF08443.11 evalue:3.6e-67 score:224.8 best_domain_score:224.5 name:RimK; db:Pfam-A.hmm|PF18030.1 evalue:8.8e-46 score:153.5 best_domain_score:152.5 name:Rimk_N;
sprot_desc Probable alpha-L-glutamate ligase;
sprot_id sp|A6VDX3|RIMK_PSEA7;
sprot_target db:uniprot_sprot|sp|A6VDX3|RIMK_PSEA7 1 301 evalue:1.1e-132 qcov:100.00 identity:77.10;
tigrfam_acc TIGR00768;
tigrfam_desc alpha-L-glutamate ligase, RimK family;
tigrfam_name rimK_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR00768 evalue:8.4e-83 score:277.1 best_domain_score:276.9 name:TIGR00768;
62908 62462 CDS
ID metaerg.pl|03056
allec_ids 6.3.2.-;
allgo_ids GO:0016881; GO:0005524; GO:0046872; GO:0006464; GO:0006412;
allko_ids K05844;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Pseudohaliea;s__Pseudohaliea rubra;
genomedb_acc GCF_000764025.1;
genomedb_target db:genomedb|GCF_000764025.1|WP_035517512.1 8 148 evalue:2.9e-47 qcov:95.30 identity:68.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-6455;
metacyc_pathway_name vancomycin resistance II;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Vancomycin-Resistnace;;
pfam_acc PF05618;
pfam_desc Putative ATP-dependant zinc protease;
pfam_id Zn_protease;
pfam_target db:Pfam-A.hmm|PF05618.11 evalue:3.5e-40 score:136.3 best_domain_score:136.2 name:Zn_protease;
sprot_desc Probable alpha-L-glutamate ligase;
sprot_id sp|A8H4D4|RIMK_SHEPA;
sprot_target db:uniprot_sprot|sp|A8H4D4|RIMK_SHEPA 12 148 evalue:7.6e-34 qcov:92.60 identity:48.90;
63749 62901 CDS
ID metaerg.pl|03057
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A sulfidiphilus_A;
genomedb_acc GCF_000377945.1;
genomedb_target db:genomedb|GCF_000377945.1|WP_038043191.1 1 259 evalue:5.6e-71 qcov:91.80 identity:54.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00924;
pfam_desc Mechanosensitive ion channel;
pfam_id MS_channel;
pfam_target db:Pfam-A.hmm|PF00924.18 evalue:8.9e-41 score:138.9 best_domain_score:138.5 name:MS_channel;
sprot_desc Uncharacterized MscS family protein AF_1546;
sprot_id sp|O28726|Y1546_ARCFU;
sprot_target db:uniprot_sprot|sp|O28726|Y1546_ARCFU 16 259 evalue:4.3e-30 qcov:86.50 identity:27.90;
tm_num 2;
63749 62901 transmembrane_helix
ID metaerg.pl|03058
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology o62943-63002i63117-63185o;
64560 63763 CDS
ID metaerg.pl|03059
genomedb_OC d__Bacteria;p__Nitrospirota;c__Thermodesulfovibrionia;o__SZUA-242;f__SZUA-242;g__SZUA-242;s__SZUA-242 sp003235715;
genomedb_acc GCA_003235715.1;
genomedb_target db:genomedb|GCA_003235715.1|QJVM01000051.1_10 7 265 evalue:2.9e-45 qcov:97.70 identity:39.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
65361 64561 CDS
ID metaerg.pl|03060
allec_ids 1.3.1.-;
allgo_ids GO:0003824; GO:0050662; GO:0016491; GO:0043158;
allko_ids K12420;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000052.1_5 7 264 evalue:1.1e-68 qcov:97.00 identity:54.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY1A0-6325; PWY-6088; PWY-3481; HCAMHPDEG-PWY; PWY-5393; PWY-5729; PWY-5367; PWY5F9-3233; PWY-5972; PWY-5466; PWY-3461; PWY-5863; PWY-5063; PWY-5064;
metacyc_pathway_name actinorhodin biosynthesis;; 3-chlorobenzoate degradation I (via chlorocatechol);; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; raspberry ketone biosynthesis;; vestitol and sativan biosynthesis;; petroselinate biosynthesis;; phthalate degradation (aerobic);; stearate biosynthesis I (animals and fungi);; matairesinol biosynthesis;; L-tyrosine biosynthesis II;; superpathway of phylloquinol biosynthesis;; phytyl diphosphate biosynthesis;; chlorophyll a biosynthesis II;;
metacyc_pathway_type Antibiotic-Biosynthesis;; 3-Chlorobenzoate-Degradation;; Amino-Acid-Biosynthesis; Super-Pathways;; Phenolic-Compounds-Degradation;; POLYKETIDE-SYN;; ISOFLAVONOID-SYN;; Unsaturated-Fatty-Acids-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Stearate-Biosynthesis;; LIGNAN-SYN;; TYROSINE-SYN;; Phylloquinone-Biosynthesis; Super-Pathways;; Phytyl-Diphosphate-Biosynthesis;; Chlorophyll-a-Biosynthesis;;
pfam_acc PF00106; PF13561; PF01370; PF08659; PF13460;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain; NAD(P)H-binding;
pfam_id adh_short; adh_short_C2; Epimerase; KR; NAD_binding_10;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:1.5e-52 score:177.1 best_domain_score:176.8 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:6.5e-34 score:116.7 best_domain_score:116.4 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:1.4e-06 score:27.2 best_domain_score:24.6 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:1.7e-15 score:56.6 best_domain_score:56.2 name:KR; db:Pfam-A.hmm|PF13460.6 evalue:2e-07 score:30.3 best_domain_score:28.7 name:NAD_binding_10;
sprot_desc Ketoacyl reductase HetN;
sprot_id sp|P37694|HETN_NOSS1;
sprot_target db:uniprot_sprot|sp|P37694|HETN_NOSS1 1 204 evalue:5.4e-22 qcov:76.70 identity:33.70;
65524 67134 CDS
ID metaerg.pl|03061
allgo_ids GO:0004222; GO:0006508;
allko_ids K01768;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Nitrosococcaceae;g__Nitrosococcus;s__Nitrosococcus halophilus;
genomedb_acc GCF_000024725.1;
genomedb_target db:genomedb|GCF_000024725.1|WP_013033512.1 28 512 evalue:4.8e-132 qcov:90.50 identity:52.40;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01435; PF00515; PF13414; PF13428; PF13432; PF14559; PF07719;
pfam_desc Peptidase family M48; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id Peptidase_M48; TPR_1; TPR_11; TPR_14; TPR_16; TPR_19; TPR_2;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:4.9e-33 score:113.8 best_domain_score:112.5 name:Peptidase_M48; db:Pfam-A.hmm|PF00515.28 evalue:2.8e-07 score:29.3 best_domain_score:21.9 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:3.7e-07 score:28.9 best_domain_score:18.3 name:TPR_11; db:Pfam-A.hmm|PF13428.6 evalue:3.3e-05 score:23.6 best_domain_score:15.1 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:8.6e-09 score:35.1 best_domain_score:30.5 name:TPR_16; db:Pfam-A.hmm|PF14559.6 evalue:5.6e-06 score:26.0 best_domain_score:23.4 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:1.4e-10 score:39.7 best_domain_score:22.6 name:TPR_2;
sp YES;
tm_num 1;
65524 65643 lipoprotein_signal_peptide
ID metaerg.pl|03062
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
65524 67134 transmembrane_helix
ID metaerg.pl|03063
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i65605-65664o;
67304 68017 CDS
ID metaerg.pl|03064
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0006355;
allko_ids K07638; K07653; K07636; K02482; K02480; K07678; K10715; K11527; K08479; K10916; K02668; K03388; K07710; K01768; K02489; K07716; K04757; K11357; K10125; K13761; K11383; K02486; K12767; K07769; K07717; K07675; K07647; K10681; K07676; K06379; K07644; K07709; K07711; K11354; K07778; K07768; K07651; K07718; K02478; K07679; K07648; K03407; K07637; K07654; K07682; K07652; K07646; K07641; K01120; K07673; K07639; K08475; K07704; K08282; K01937; K07645; K07708; K07677; K02491; K11231; K07642; K11711; K11356; K11640; K02484; K00760; K07773;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__SNC69-320;s__SNC69-320 sp001725155;
genomedb_acc GCA_001725155.1;
genomedb_target db:genomedb|GCA_001725155.1|ODU34194.1 4 234 evalue:1.2e-47 qcov:97.50 identity:47.20;
kegg_pathway_id 00983; 00230; 05111; 00240; 04011; 02020; 03090; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:4.3e-28 score:97.0 best_domain_score:96.3 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:2.1e-19 score:68.6 best_domain_score:67.8 name:Trans_reg_C;
sprot_desc Aerobic respiration control protein ArcA;
sprot_id sp|P0A9Q3|ARCA_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9Q3|ARCA_ECO57 2 234 evalue:1.1e-34 qcov:98.30 identity:34.20;
68937 68089 CDS
ID metaerg.pl|03065
allec_ids 4.2.1.116;
allgo_ids GO:0003824; GO:0043956; GO:0006631;
allko_ids K07514; K10527; K01825; K07515; K01692; K00022; K07516; K01782; K15016; K13767; K15019;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000075.1_154 4 276 evalue:3.4e-105 qcov:96.80 identity:71.40;
kegg_pathway_id 00310; 00281; 00280; 00632; 00930; 00380; 00062; 00903; 01040; 00071; 00592; 00410; 00650; 00640;
kegg_pathway_name Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Fatty acid elongation in mitochondria; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; Fatty acid metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Butanoate metabolism; Propanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-4221; PWY-5789; PWY-3941; PWY-5743;
metacyc_pathway_name superpathway of coenzyme A biosynthesis II (plants);; 3-hydroxypropanoate/4-hydroxybutanate cycle;; β-alanine biosynthesis II;; 3-hydroxypropanoate cycle;;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;; Beta-Alanine-Biosynthesis;; Autotrophic-CO2-Fixation;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:2.1e-31 score:108.4 best_domain_score:108.1 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:4.6e-15 score:55.2 best_domain_score:55.0 name:ECH_2;
sprot_desc 3-hydroxypropionyl-coenzyme A dehydratase;
sprot_id sp|A4YI89|HPCD_METS5;
sprot_target db:uniprot_sprot|sp|A4YI89|HPCD_METS5 4 234 evalue:2.5e-25 qcov:81.90 identity:31.30;
69010 69867 CDS
ID metaerg.pl|03066
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Palsa-504;s__Palsa-504 sp003161205;
genomedb_acc GCA_003161205.1;
genomedb_target db:genomedb|GCA_003161205.1|PMOU01000231.1_14 6 278 evalue:1.2e-57 qcov:95.80 identity:46.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01261;
pfam_desc Xylose isomerase-like TIM barrel;
pfam_id AP_endonuc_2;
pfam_target db:Pfam-A.hmm|PF01261.24 evalue:9.6e-14 score:50.5 best_domain_score:49.8 name:AP_endonuc_2;
69860 71185 CDS
ID metaerg.pl|03067
allgo_ids GO:0006508; GO:0016805; GO:0006887;
allko_ids K14358;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Caldilinea;s__Caldilinea aerophila;
genomedb_acc GCF_000281175.1;
genomedb_target db:genomedb|GCF_000281175.1|WP_083857612.1 1 439 evalue:8.1e-101 qcov:99.50 identity:46.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF03577;
pfam_desc Peptidase family C69;
pfam_id Peptidase_C69;
pfam_target db:Pfam-A.hmm|PF03577.15 evalue:8e-12 score:44.0 best_domain_score:42.7 name:Peptidase_C69;
sprot_desc Secernin-2;
sprot_id sp|Q8VCA8|SCRN2_MOUSE;
sprot_target db:uniprot_sprot|sp|Q8VCA8|SCRN2_MOUSE 2 319 evalue:2.5e-56 qcov:72.10 identity:41.20;
72779 71562 CDS
ID metaerg.pl|03068
allec_ids 2.3.1.35; 2.3.1.1; 2.3.1.35 2.3.1.1;
allgo_ids GO:0004358; GO:0006526; GO:0005737; GO:0004042; GO:0103045;
allko_ids K00620;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Haliea;s__Haliea sp002414665;
genomedb_acc GCA_002414665.1;
genomedb_target db:genomedb|GCA_002414665.1|DIAF01000039.1_12 1 405 evalue:9.3e-128 qcov:100.00 identity:63.50;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-5154; ARGSYN-PWY; GLUTORN-PWY; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY;
metacyc_pathway_name L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);; L-ornithine biosynthesis I;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);;
metacyc_pathway_type ARGININE-SYN;; ARGININE-SYN; Super-Pathways;; L-Ornithine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF01960;
pfam_desc ArgJ family;
pfam_id ArgJ;
pfam_target db:Pfam-A.hmm|PF01960.18 evalue:3.1e-135 score:450.0 best_domain_score:449.8 name:ArgJ;
sprot_desc Arginine biosynthesis bifunctional protein ArgJ;
sprot_id sp|Q4K7C2|ARGJ_PSEF5;
sprot_target db:uniprot_sprot|sp|Q4K7C2|ARGJ_PSEF5 1 405 evalue:7.2e-119 qcov:100.00 identity:59.40;
tigrfam_acc TIGR00120;
tigrfam_desc glutamate N-acetyltransferase/amino-acid acetyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ArgJ;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00120 evalue:1.4e-117 score:392.1 best_domain_score:391.8 name:TIGR00120;
73397 72891 CDS
ID metaerg.pl|03069
allgo_ids GO:0016020; GO:0017038; GO:0005737; GO:0005886; GO:0005524; GO:0046872; GO:0065002; GO:0006605;
allko_ids K03070;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR31842.1 2 164 evalue:1.7e-46 qcov:97.00 identity:66.30;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF02810; PF07516;
pfam_desc SEC-C motif; SecA Wing and Scaffold domain;
pfam_id SEC-C; SecA_SW;
pfam_target db:Pfam-A.hmm|PF02810.15 evalue:1.5e-11 score:43.2 best_domain_score:42.7 name:SEC-C; db:Pfam-A.hmm|PF07516.13 evalue:1e-25 score:90.2 best_domain_score:89.8 name:SecA_SW;
sprot_desc hypothetical protein;
sprot_id sp|A0KPW5|SECA_AERHH;
sprot_target db:uniprot_sprot|sp|A0KPW5|SECA_AERHH 1 165 evalue:1.5e-33 qcov:98.20 identity:45.50;
73586 73510 tRNA
ID metaerg.pl|03070
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
name tRNA_Leu_gag;
74034 74288 CDS
ID metaerg.pl|03071
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
74829 75497 CDS
ID metaerg.pl|03072
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas maltophilia_AG;
genomedb_acc GCA_002387845.1;
genomedb_target db:genomedb|GCA_002387845.1|DGLB01000011.1_34 6 222 evalue:3.4e-39 qcov:97.70 identity:47.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
76773 75772 CDS
ID metaerg.pl|03073
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__Teredinibacter;s__Teredinibacter turnerae_B;
genomedb_acc GCF_000023025.1;
genomedb_target db:genomedb|GCF_000023025.1|WP_015818733.1 32 332 evalue:1.3e-71 qcov:90.40 identity:47.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:5.7e-33 score:112.2 best_domain_score:111.7 name:Peptidase_M23;
76997 76770 CDS
ID metaerg.pl|03074
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
78314 77400 CDS
ID metaerg.pl|03075
allec_ids 3.5.1.108; 3.5.1.-;
allgo_ids GO:0008759; GO:0009245; GO:0046872; GO:0103117;
allko_ids K02535;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__UBA5105;s__UBA5105 sp002692965;
genomedb_acc GCA_002692965.1;
genomedb_target db:genomedb|GCA_002692965.1|MAL95959.1 1 300 evalue:1.6e-116 qcov:98.70 identity:69.70;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-5784; PWY-5327; KDO-NAGLIPASYN-PWY; PWY-6548; LYSDEGII-PWY; LPSSYN-PWY; PWY-1822; PWY-0; NAGLIPASYN-PWY;
metacyc_pathway_name indole-3-acetate inactivation VIII;; superpathway of L-lysine degradation;; superpathway of (Kdo)2-lipid A biosynthesis;; ; L-lysine degradation III;; superpathway of lipopolysaccharide biosynthesis;; indole-3-acetate activation I;; putrescine degradation III;; lipid IVA biosynthesis;;
metacyc_pathway_type Indole-3-Acetate-Inactivation;; LYSINE-DEG; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ; LYSINE-DEG;; Lipid-Biosynthesis; Super-Pathways;; Activation;; Putrescine-Degradation;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis;;
pfam_acc PF03331;
pfam_desc UDP-3-O-acyl N-acetylglycosamine deacetylase;
pfam_id LpxC;
pfam_target db:Pfam-A.hmm|PF03331.13 evalue:9.4e-103 score:342.6 best_domain_score:342.4 name:LpxC;
sprot_desc UDP-3-O-acyl-N-acetylglucosamine deacetylase;
sprot_id sp|C1DQA6|LPXC_AZOVD;
sprot_target db:uniprot_sprot|sp|C1DQA6|LPXC_AZOVD 1 301 evalue:3.3e-116 qcov:99.00 identity:68.80;
tigrfam_acc TIGR00325;
tigrfam_desc UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;
tigrfam_mainrole Cell envelope;
tigrfam_name lpxC;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00325 evalue:4e-111 score:370.2 best_domain_score:369.9 name:TIGR00325;
79588 78440 CDS
ID metaerg.pl|03076
allgo_ids GO:0003924; GO:0032153; GO:0005737; GO:0005525; GO:0051301; GO:0000917; GO:0043093; GO:0051258;
allko_ids K03531;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000063.1_24 1 382 evalue:1.0e-152 qcov:100.00 identity:75.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF12327; PF00091;
pfam_desc FtsZ family, C-terminal domain; Tubulin/FtsZ family, GTPase domain;
pfam_id FtsZ_C; Tubulin;
pfam_target db:Pfam-A.hmm|PF12327.8 evalue:2.6e-37 score:126.2 best_domain_score:124.7 name:FtsZ_C; db:Pfam-A.hmm|PF00091.25 evalue:6.7e-37 score:126.8 best_domain_score:126.7 name:Tubulin;
sprot_desc Cell division protein FtsZ;
sprot_id sp|P47204|FTSZ_PSEAE;
sprot_target db:uniprot_sprot|sp|P47204|FTSZ_PSEAE 1 382 evalue:2.5e-137 qcov:100.00 identity:66.70;
tigrfam_acc TIGR00065;
tigrfam_desc cell division protein FtsZ;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsZ;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR00065 evalue:3.8e-125 score:417.0 best_domain_score:416.5 name:TIGR00065;
80890 79655 CDS
ID metaerg.pl|03077
allgo_ids GO:0000902; GO:0032153; GO:0009898; GO:0051301; GO:0043093;
allko_ids K03590;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Spongiibacteraceae;g__Oceanicoccus;s__Oceanicoccus sp900120175;
genomedb_acc GCF_900120175.1;
genomedb_target db:genomedb|GCF_900120175.1|WP_101760170.1 7 410 evalue:2.4e-184 qcov:98.30 identity:81.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF06277; PF14450; PF00012; PF06723; PF02491;
pfam_desc Ethanolamine utilisation protein EutA; Cell division protein FtsA; Hsp70 protein; MreB/Mbl protein; SHS2 domain inserted in FTSA;
pfam_id EutA; FtsA; HSP70; MreB_Mbl; SHS2_FTSA;
pfam_target db:Pfam-A.hmm|PF06277.11 evalue:5.5e-07 score:28.0 best_domain_score:28.0 name:EutA; db:Pfam-A.hmm|PF14450.6 evalue:7.4e-42 score:141.2 best_domain_score:89.8 name:FtsA; db:Pfam-A.hmm|PF00012.20 evalue:9.9e-07 score:26.5 best_domain_score:12.2 name:HSP70; db:Pfam-A.hmm|PF06723.13 evalue:1.1e-14 score:53.2 best_domain_score:53.2 name:MreB_Mbl; db:Pfam-A.hmm|PF02491.20 evalue:9.5e-33 score:111.7 best_domain_score:111.7 name:SHS2_FTSA;
sprot_desc Cell division protein FtsA;
sprot_id sp|P47203|FTSA_PSEAE;
sprot_target db:uniprot_sprot|sp|P47203|FTSA_PSEAE 7 410 evalue:3.6e-174 qcov:98.30 identity:75.80;
tigrfam_acc TIGR01174;
tigrfam_desc cell division protein FtsA;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsA;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR01174 evalue:1.4e-158 score:527.0 best_domain_score:526.8 name:TIGR01174;
81621 80896 CDS
ID metaerg.pl|03078
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__BRH-c0;s__BRH-c0 sp002702725;
genomedb_acc GCA_002702725.1;
genomedb_target db:genomedb|GCA_002702725.1|MAT50540.1 26 227 evalue:1.5e-29 qcov:83.80 identity:35.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF03799; PF08478;
pfam_desc Cell division protein FtsQ; POTRA domain, FtsQ-type;
pfam_id FtsQ; POTRA_1;
pfam_target db:Pfam-A.hmm|PF03799.15 evalue:8.5e-15 score:54.8 best_domain_score:54.1 name:FtsQ; db:Pfam-A.hmm|PF08478.10 evalue:2e-06 score:27.2 best_domain_score:26.3 name:POTRA_1;
83045 81621 CDS
ID metaerg.pl|03079
allec_ids 6.3.2.8;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0008763; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K02558; K01925; K01929; K01924; K01928;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000184.1_3 11 471 evalue:1.7e-176 qcov:97.30 identity:69.80;
kegg_pathway_id 00550; 00471; 00300;
kegg_pathway_name Peptidoglycan biosynthesis; D-Glutamine and D-glutamate metabolism; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6386; PWY-6470; PWY-6387; PWY-6385; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis V (β-lactam resistance);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01225; PF02875; PF08245;
pfam_desc Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase; Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF01225.25 evalue:5.5e-28 score:96.4 best_domain_score:95.3 name:Mur_ligase; db:Pfam-A.hmm|PF02875.21 evalue:6.4e-20 score:70.4 best_domain_score:68.6 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:2.2e-32 score:111.9 best_domain_score:111.4 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramate--L-alanine ligase;
sprot_id sp|C3KCT1|MURC_PSEFS;
sprot_target db:uniprot_sprot|sp|C3KCT1|MURC_PSEFS 12 467 evalue:1.8e-174 qcov:96.20 identity:68.30;
tigrfam_acc TIGR01082;
tigrfam_desc UDP-N-acetylmuramate--L-alanine ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murC;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01082 evalue:1.5e-163 score:544.2 best_domain_score:544.0 name:TIGR01082;
84229 83042 CDS
ID metaerg.pl|03080
allec_ids 2.4.1.129;
allgo_ids GO:0016021; GO:0051301; GO:0032153; GO:0005887; GO:0008955; GO:0071555; GO:0043093; GO:0009252; GO:0008360;
allko_ids K03588;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000184.1_4 6 366 evalue:1.2e-87 qcov:91.40 identity:53.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6470; PWY-6385; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01098;
pfam_desc Cell cycle protein;
pfam_id FTSW_RODA_SPOVE;
pfam_target db:Pfam-A.hmm|PF01098.19 evalue:2e-95 score:319.1 best_domain_score:318.8 name:FTSW_RODA_SPOVE;
sprot_desc Probable peptidoglycan glycosyltransferase FtsW;
sprot_id sp|C3KCS9|FTSW_PSEFS;
sprot_target db:uniprot_sprot|sp|C3KCS9|FTSW_PSEFS 38 373 evalue:1.3e-77 qcov:85.10 identity:47.00;
tigrfam_acc TIGR02614;
tigrfam_desc cell division protein FtsW;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsW;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR02614 evalue:2.4e-114 score:381.3 best_domain_score:381.1 name:TIGR02614;
tm_num 8;
84229 83042 transmembrane_helix
ID metaerg.pl|03081
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i83075-83143o83186-83254i83267-83320o83507-83575i83588-83647o83831-83899i83957-84025o84068-84136i;
85581 84226 CDS
ID metaerg.pl|03082
allec_ids 6.3.2.9;
allgo_ids GO:0005524; GO:0009058; GO:0016874; GO:0005737; GO:0008764; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01928; K01925; K01924; K01929;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Imhoffiella;s__Imhoffiella purpurea;
genomedb_acc GCF_000585215.1;
genomedb_target db:genomedb|GCF_000585215.1|WP_052347961.1 3 446 evalue:5.5e-105 qcov:98.40 identity:51.20;
kegg_pathway_id 00471; 00300; 00550;
kegg_pathway_name D-Glutamine and D-glutamate metabolism; Lysine biosynthesis; Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-6470; PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6386; PWY-5265; PWY-6385; PWY-6387;
metacyc_pathway_name peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis III (mycobacteria);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;;
pfam_acc PF02875; PF08245;
pfam_desc Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF02875.21 evalue:2.5e-08 score:33.3 best_domain_score:31.2 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:1e-24 score:86.9 best_domain_score:84.2 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
sprot_id sp|Q9HVZ9|MURD_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HVZ9|MURD_PSEAE 8 446 evalue:8.6e-97 qcov:97.30 identity:49.50;
tigrfam_acc TIGR01087;
tigrfam_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murD;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01087 evalue:2.1e-120 score:401.9 best_domain_score:401.7 name:TIGR01087;
86669 85587 CDS
ID metaerg.pl|03083
allec_ids 2.7.8.13;
allgo_ids GO:0008963; GO:0016021; GO:0005886; GO:0051992; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01000;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Zooshikellaceae;g__Zooshikella;s__Zooshikella ganghwensis;
genomedb_acc GCF_000428585.1;
genomedb_target db:genomedb|GCF_000428585.1|WP_027706429.1 1 360 evalue:6.9e-159 qcov:100.00 identity:76.90;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6470; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00953; PF10555;
pfam_desc Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1;
pfam_id Glycos_transf_4; MraY_sig1;
pfam_target db:Pfam-A.hmm|PF00953.21 evalue:1.9e-35 score:121.4 best_domain_score:121.4 name:Glycos_transf_4; db:Pfam-A.hmm|PF10555.9 evalue:2e-05 score:23.1 best_domain_score:23.1 name:MraY_sig1;
sprot_desc Phospho-N-acetylmuramoyl-pentapeptide-transferase;
sprot_id sp|Q2S9Y9|MRAY_HAHCH;
sprot_target db:uniprot_sprot|sp|Q2S9Y9|MRAY_HAHCH 1 360 evalue:1.6e-154 qcov:100.00 identity:74.70;
tigrfam_acc TIGR00445;
tigrfam_desc phospho-N-acetylmuramoyl-pentapeptide-transferase;
tigrfam_mainrole Cell envelope;
tigrfam_name mraY;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00445 evalue:5.1e-133 score:442.6 best_domain_score:442.4 name:TIGR00445;
tm_num 10;
86669 85587 transmembrane_helix
ID metaerg.pl|03084
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology o85650-85718i85779-85847o85875-85928i85986-86045o86088-86156i86175-86243o86286-86354i86373-86441o86451-86519i86598-86657o;
88213 86672 CDS
ID metaerg.pl|03085
allec_ids 6.3.2.13;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0000287; GO:0008765; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01928; K05362; K01925; K01929;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Frateuria_B;s__Frateuria_B sp001428405;
genomedb_acc GCF_001428405.1;
genomedb_target db:genomedb|GCF_001428405.1|WP_056008849.1 6 492 evalue:1.3e-118 qcov:94.90 identity:51.80;
kegg_pathway_id 00300; 00471; 00550;
kegg_pathway_name Lysine biosynthesis; D-Glutamine and D-glutamate metabolism; Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-6385; PWY-6387; PEPTIDOGLYCANSYN-PWY;
metacyc_pathway_name peptidoglycan biosynthesis III (mycobacteria);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01225; PF02875; PF08245;
pfam_desc Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase; Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF01225.25 evalue:1.2e-10 score:40.8 best_domain_score:38.8 name:Mur_ligase; db:Pfam-A.hmm|PF02875.21 evalue:2.9e-23 score:81.2 best_domain_score:78.1 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:9.8e-42 score:142.3 best_domain_score:141.8 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase;
sprot_id sp|Q7NPZ4|MURE_CHRVO;
sprot_target db:uniprot_sprot|sp|Q7NPZ4|MURE_CHRVO 28 497 evalue:1.1e-92 qcov:91.60 identity:45.10;
tigrfam_acc TIGR01085;
tigrfam_desc UDP-N-acetylmuramyl-tripeptide synthetase;
tigrfam_mainrole Cell envelope;
tigrfam_name murE;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01085 evalue:8.5e-138 score:459.3 best_domain_score:459.1 name:TIGR01085;
89979 88210 CDS
ID metaerg.pl|03086
allec_ids 3.4.16.4;
allgo_ids GO:0008658; GO:0005887; GO:0008955; GO:0009002; GO:0071555; GO:0000917; GO:0043093; GO:0009252; GO:0008360;
allko_ids K03587; K12556; K08384; K05364; K08884; K05366; K08282;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Spongiibacteraceae;g__Oceanicoccus;s__Oceanicoccus sp900120175;
genomedb_acc GCF_900120175.1;
genomedb_target db:genomedb|GCF_900120175.1|WP_101760344.1 28 574 evalue:6.2e-165 qcov:92.90 identity:55.30;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF03717; PF00905;
pfam_desc Penicillin-binding Protein dimerisation domain; Penicillin binding protein transpeptidase domain;
pfam_id PBP_dimer; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF03717.15 evalue:2.3e-18 score:66.4 best_domain_score:62.0 name:PBP_dimer; db:Pfam-A.hmm|PF00905.22 evalue:8.8e-71 score:237.8 best_domain_score:237.6 name:Transpeptidase;
sprot_desc Peptidoglycan D,D-transpeptidase FtsI;
sprot_id sp|G3XD46|FTSI_PSEAE;
sprot_target db:uniprot_sprot|sp|G3XD46|FTSI_PSEAE 31 574 evalue:3.6e-135 qcov:92.40 identity:45.90;
tm_num 1;
89979 88210 transmembrane_helix
ID metaerg.pl|03087
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i88297-88365o;
90296 89976 CDS
ID metaerg.pl|03088
allgo_ids GO:0016021; GO:0051301;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__21-64-14;f__21-64-14;g__21-64-14;s__21-64-14 sp002255365;
genomedb_acc GCA_002255365.1;
genomedb_target db:genomedb|GCA_002255365.1|OYV78260.1 32 106 evalue:1.9e-11 qcov:70.80 identity:54.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF04999;
pfam_desc Cell division protein FtsL;
pfam_id FtsL;
pfam_target db:Pfam-A.hmm|PF04999.13 evalue:1.1e-22 score:79.1 best_domain_score:78.9 name:FtsL;
tigrfam_acc TIGR02209;
tigrfam_desc cell division protein FtsL;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsL_broad;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR02209 evalue:1.2e-17 score:62.7 best_domain_score:62.6 name:TIGR02209;
tm_num 1;
90296 89976 transmembrane_helix
ID metaerg.pl|03089
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology o90033-90101i;
91234 90293 CDS
ID metaerg.pl|03090
allec_ids 2.1.1.199;
allgo_ids GO:0008168; GO:0005737; GO:0071424; GO:0070475;
allko_ids K03438;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D;s__Pseudomonas_D aestusnigri;
genomedb_acc GCF_002197985.1;
genomedb_target db:genomedb|GCF_002197985.1|WP_088274811.1 1 308 evalue:4.2e-88 qcov:98.40 identity:55.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01795;
pfam_desc MraW methylase family;
pfam_id Methyltransf_5;
pfam_target db:Pfam-A.hmm|PF01795.19 evalue:1e-99 score:333.2 best_domain_score:333.0 name:Methyltransf_5;
sprot_desc Ribosomal RNA small subunit methyltransferase H;
sprot_id sp|Q1QVF9|RSMH_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QVF9|RSMH_CHRSD 2 309 evalue:2.4e-85 qcov:98.40 identity:55.70;
tigrfam_acc TIGR00006;
tigrfam_desc 16S rRNA (cytosine(1402)-N(4))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00006;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00006 evalue:6.1e-97 score:323.9 best_domain_score:323.8 name:TIGR00006;
91695 91234 CDS
ID metaerg.pl|03091
allgo_ids GO:0005737; GO:0009295; GO:0003677; GO:0003700;
allko_ids K03925;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Zooshikellaceae;g__Zooshikella;s__Zooshikella ganghwensis;
genomedb_acc GCF_000428585.1;
genomedb_target db:genomedb|GCF_000428585.1|WP_027706435.1 2 153 evalue:2.1e-48 qcov:99.30 identity:61.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF02381;
pfam_desc MraZ protein, putative antitoxin-like;
pfam_id MraZ;
pfam_target db:Pfam-A.hmm|PF02381.18 evalue:4.7e-34 score:115.5 best_domain_score:58.1 name:MraZ;
sprot_desc Transcriptional regulator MraZ;
sprot_id sp|A1WYV2|MRAZ_HALHL;
sprot_target db:uniprot_sprot|sp|A1WYV2|MRAZ_HALHL 2 153 evalue:7.8e-42 qcov:99.30 identity:53.30;
tigrfam_acc TIGR00242;
tigrfam_desc division/cell wall cluster transcriptional repressor MraZ;
tigrfam_mainrole Regulatory functions;
tigrfam_name TIGR00242;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00242 evalue:4.1e-44 score:149.1 best_domain_score:149.0 name:TIGR00242;
93409 92540 CDS
ID metaerg.pl|03092
allec_ids 2.1.1.198;
allgo_ids GO:0008168; GO:0005737; GO:0070677; GO:0000453;
allko_ids K07056;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Oleiagrimonas;s__Oleiagrimonas sp003267965;
genomedb_acc GCA_003267965.1;
genomedb_target db:genomedb|GCA_003267965.1|RAP59527.1 7 278 evalue:8.5e-75 qcov:94.10 identity:57.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00590;
pfam_desc Tetrapyrrole (Corrin/Porphyrin) Methylases;
pfam_id TP_methylase;
pfam_target db:Pfam-A.hmm|PF00590.20 evalue:9.4e-28 score:96.8 best_domain_score:96.8 name:TP_methylase;
sprot_desc Ribosomal RNA small subunit methyltransferase I;
sprot_id sp|Q87B70|RSMI_XYLFT;
sprot_target db:uniprot_sprot|sp|Q87B70|RSMI_XYLFT 12 278 evalue:5.0e-66 qcov:92.40 identity:53.90;
tigrfam_acc TIGR00096;
tigrfam_desc 16S rRNA (cytidine(1402)-2'-O)-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00096;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00096 evalue:2.1e-75 score:252.8 best_domain_score:252.6 name:TIGR00096;
93453 95312 CDS
ID metaerg.pl|03093
allgo_ids GO:0031241; GO:0030234; GO:0009252; GO:0008360;
allko_ids K07121;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E sp003050835;
genomedb_acc GCF_003050835.1;
genomedb_target db:genomedb|GCF_003050835.1|WP_108098552.1 5 603 evalue:9.3e-95 qcov:96.80 identity:37.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF04348; PF13458;
pfam_desc LppC putative lipoprotein; Periplasmic binding protein;
pfam_id LppC; Peripla_BP_6;
pfam_target db:Pfam-A.hmm|PF04348.13 evalue:1.6e-111 score:372.9 best_domain_score:372.7 name:LppC; db:Pfam-A.hmm|PF13458.6 evalue:1.4e-13 score:50.5 best_domain_score:49.6 name:Peripla_BP_6;
sp YES;
sprot_desc Penicillin-binding protein activator LpoA;
sprot_id sp|D0KEP3|LPOA_PECPW;
sprot_target db:uniprot_sprot|sp|D0KEP3|LPOA_PECPW 5 604 evalue:5.2e-28 qcov:96.90 identity:23.50;
93453 93506 lipoprotein_signal_peptide
ID metaerg.pl|03094
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
95487 95852 CDS
ID metaerg.pl|03095
allgo_ids GO:0004518; GO:0003676;
allko_ids K07460;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Hydrogenophilaceae;g__Thiobacillus;s__Thiobacillus sp002256995;
genomedb_acc GCA_002256995.1;
genomedb_target db:genomedb|GCA_002256995.1|OYZ29894.1 6 116 evalue:9.8e-25 qcov:91.70 identity:55.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF02021;
pfam_desc Uncharacterised protein family UPF0102;
pfam_id UPF0102;
pfam_target db:Pfam-A.hmm|PF02021.17 evalue:5.2e-27 score:93.1 best_domain_score:92.9 name:UPF0102;
sprot_desc hypothetical protein;
sprot_id sp|A4G1M4|Y176_HERAR;
sprot_target db:uniprot_sprot|sp|A4G1M4|Y176_HERAR 6 117 evalue:8.4e-23 qcov:92.60 identity:45.50;
tigrfam_acc TIGR00252;
tigrfam_desc TIGR00252 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00252;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00252 evalue:6.8e-28 score:96.2 best_domain_score:96.0 name:TIGR00252;
95898 96482 CDS
ID metaerg.pl|03096
allgo_ids GO:0042597;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__Microbulbifer;s__Microbulbifer pacificus;
genomedb_acc GCF_002959965.1;
genomedb_target db:genomedb|GCF_002959965.1|WP_105101675.1 11 194 evalue:1.0e-36 qcov:94.80 identity:45.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF04972;
pfam_desc BON domain;
pfam_id BON;
pfam_target db:Pfam-A.hmm|PF04972.17 evalue:6e-20 score:70.6 best_domain_score:43.5 name:BON;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P64598|YRAP_ECO57;
sprot_target db:uniprot_sprot|sp|P64598|YRAP_ECO57 12 193 evalue:1.2e-23 qcov:93.80 identity:37.60;
95898 95966 lipoprotein_signal_peptide
ID metaerg.pl|03097
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
97092 96652 CDS
ID metaerg.pl|03098
allko_ids K03600;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Luteimonas;s__Luteimonas sp000472505;
genomedb_acc GCF_000472505.1;
genomedb_target db:genomedb|GCF_000472505.1|WP_027072891.1 4 146 evalue:2.2e-31 qcov:97.90 identity:52.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF04386;
pfam_desc Stringent starvation protein B;
pfam_id SspB;
pfam_target db:Pfam-A.hmm|PF04386.13 evalue:5e-28 score:97.2 best_domain_score:97.0 name:SspB;
sprot_desc Stringent starvation protein B;
sprot_id sp|P0AFZ4|SSPB_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFZ4|SSPB_ECO57 5 108 evalue:6.3e-25 qcov:71.20 identity:52.90;
97889 97260 CDS
ID metaerg.pl|03099
allgo_ids GO:0005515;
allko_ids K04097; K01800; K00799; K03599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA4582;s__UBA4582 sp002389265;
genomedb_acc GCA_002389265.1;
genomedb_target db:genomedb|GCA_002389265.1|DGOD01000216.1_6 3 207 evalue:3.5e-86 qcov:98.10 identity:74.10;
kegg_pathway_id 00480; 00643; 00350;
kegg_pathway_name Glutathione metabolism; Styrene degradation; Tyrosine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00043; PF13410; PF02798; PF13409; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_2; GST_N; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:2.5e-08 score:33.3 best_domain_score:32.9 name:GST_C; db:Pfam-A.hmm|PF13410.6 evalue:1.8e-10 score:40.0 best_domain_score:38.9 name:GST_C_2; db:Pfam-A.hmm|PF02798.20 evalue:9.4e-16 score:57.2 best_domain_score:56.3 name:GST_N; db:Pfam-A.hmm|PF13409.6 evalue:1.2e-15 score:56.7 best_domain_score:55.6 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:6.6e-18 score:64.1 best_domain_score:63.3 name:GST_N_3;
sprot_desc Stringent starvation protein A;
sprot_id sp|P0ACA5|SSPA_ECO57;
sprot_target db:uniprot_sprot|sp|P0ACA5|SSPA_ECO57 1 207 evalue:6.9e-65 qcov:99.00 identity:57.40;
98676 97942 CDS
ID metaerg.pl|03100
allgo_ids GO:0009055; GO:0020037; GO:0016021; GO:0005886; GO:0070469; GO:0046872;
allko_ids K00413;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA4421;s__UBA4421 sp002390555;
genomedb_acc GCA_002390555.1;
genomedb_target db:genomedb|GCA_002390555.1|DGPT01000132.1_38 9 242 evalue:2.2e-71 qcov:95.90 identity:58.70;
kegg_pathway_id 00190; 05012;
kegg_pathway_name Oxidative phosphorylation; Parkinson's disease;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF02167;
pfam_desc Cytochrome C1 family;
pfam_id Cytochrom_C1;
pfam_target db:Pfam-A.hmm|PF02167.15 evalue:2.3e-15 score:56.1 best_domain_score:37.6 name:Cytochrom_C1;
sp YES;
sprot_desc Cytochrome c1;
sprot_id sp|O31216|CY1_ALLVD;
sprot_target db:uniprot_sprot|sp|O31216|CY1_ALLVD 10 244 evalue:1.1e-61 qcov:96.30 identity:50.80;
tm_num 2;
97942 98016 signal_peptide
ID metaerg.pl|03101
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
98676 97942 transmembrane_helix
ID metaerg.pl|03102
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology o97951-98019i98590-98649o;
99986 98676 CDS
ID metaerg.pl|03103
allgo_ids GO:0009055; GO:0016020; GO:0016491; GO:0016021; GO:0005886; GO:0045275; GO:0046872; GO:0008121; GO:0006122;
allko_ids K00412;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR29977.1 31 434 evalue:5.7e-192 qcov:92.70 identity:79.00;
kegg_pathway_id 00190; 05012;
kegg_pathway_name Oxidative phosphorylation; Parkinson's disease;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00033; PF00032; PF13631;
pfam_desc Cytochrome b/b6/petB; Cytochrome b(C-terminal)/b6/petD; Cytochrome b(N-terminal)/b6/petB;
pfam_id Cytochrome_B; Cytochrom_B_C; Cytochrom_B_N_2;
pfam_target db:Pfam-A.hmm|PF00033.19 evalue:4.7e-65 score:218.2 best_domain_score:218.2 name:Cytochrome_B; db:Pfam-A.hmm|PF00032.17 evalue:2.2e-39 score:133.1 best_domain_score:133.1 name:Cytochrom_B_C; db:Pfam-A.hmm|PF13631.6 evalue:4.8e-41 score:139.8 best_domain_score:139.8 name:Cytochrom_B_N_2;
sprot_desc Cytochrome b;
sprot_id sp|O31215|CYB_ALLVD;
sprot_target db:uniprot_sprot|sp|O31215|CYB_ALLVD 31 434 evalue:5.7e-146 qcov:92.70 identity:62.00;
tm_num 10;
99986 98676 transmembrane_helix
ID metaerg.pl|03104
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i98850-98918o98997-99065i99102-99170o99183-99242i99303-99371o99471-99539i99615-99683o99693-99752i99789-99857o99870-99938i;
100591 99986 CDS
ID metaerg.pl|03105
allec_ids 7.1.1.8; 1.10.2.2;
allgo_ids GO:0016491; GO:0051537; GO:0055114; GO:0016021; GO:0005886; GO:0046872; GO:0008121;
allko_ids K02636; K00411;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000022.1_6 7 201 evalue:2.2e-74 qcov:97.00 identity:65.80;
kegg_pathway_id 00195; 00190; 05012;
kegg_pathway_name Photosynthesis; Oxidative phosphorylation; Parkinson's disease;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00355; PF10399;
pfam_desc Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal;
pfam_id Rieske; UCR_Fe-S_N;
pfam_target db:Pfam-A.hmm|PF00355.26 evalue:1.4e-10 score:40.2 best_domain_score:38.7 name:Rieske; db:Pfam-A.hmm|PF10399.9 evalue:8e-12 score:43.6 best_domain_score:43.6 name:UCR_Fe-S_N;
sp YES;
sprot_desc Ubiquinol-cytochrome c reductase iron-sulfur subunit;
sprot_id sp|O31214|UCRI_ALLVD;
sprot_target db:uniprot_sprot|sp|O31214|UCRI_ALLVD 1 201 evalue:5.1e-49 qcov:100.00 identity:47.80;
tigrfam_acc TIGR01416;
tigrfam_desc ubiquinol-cytochrome c reductase, iron-sulfur subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name Rieske_proteo;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01416 evalue:8.2e-60 score:200.9 best_domain_score:200.8 name:TIGR01416;
tm_num 1;
99986 100120 signal_peptide
ID metaerg.pl|03106
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
100591 99986 transmembrane_helix
ID metaerg.pl|03107
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology i100022-100090o;
101251 100838 CDS
ID metaerg.pl|03108
allgo_ids GO:0003735; GO:0005840; GO:0006412;
allko_ids K02996;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E fulva_A;
genomedb_acc GCF_000834555.1;
genomedb_target db:genomedb|GCF_000834555.1|WP_042556350.1 11 137 evalue:1.2e-50 qcov:92.70 identity:82.70;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00380;
pfam_desc Ribosomal protein S9/S16;
pfam_id Ribosomal_S9;
pfam_target db:Pfam-A.hmm|PF00380.19 evalue:7.4e-47 score:158.1 best_domain_score:157.9 name:Ribosomal_S9;
sprot_desc 30S ribosomal protein S9;
sprot_id sp|C3K6E2|RS9_PSEFS;
sprot_target db:uniprot_sprot|sp|C3K6E2|RS9_PSEFS 11 137 evalue:6.3e-51 qcov:92.70 identity:81.10;
101693 101265 CDS
ID metaerg.pl|03109
allgo_ids GO:0003735; GO:0005840; GO:0006412;
allko_ids K02871;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA4421;s__UBA4421 sp002684495;
genomedb_acc GCA_002684495.1;
genomedb_target db:genomedb|GCA_002684495.1|MAD07951.1 1 142 evalue:1.6e-55 qcov:100.00 identity:73.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00572;
pfam_desc Ribosomal protein L13;
pfam_id Ribosomal_L13;
pfam_target db:Pfam-A.hmm|PF00572.18 evalue:2.1e-55 score:185.5 best_domain_score:185.3 name:Ribosomal_L13;
sprot_desc 50S ribosomal protein L13;
sprot_id sp|Q1QVF0|RL13_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QVF0|RL13_CHRSD 1 142 evalue:8.0e-57 qcov:100.00 identity:73.20;
tigrfam_acc TIGR01066;
tigrfam_desc ribosomal protein uL13;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplM_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01066 evalue:6.1e-61 score:203.5 best_domain_score:203.4 name:TIGR01066;
103015 101903 CDS
ID metaerg.pl|03110
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0007049; GO:0051301;
allko_ids K06916;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000017.1_28 1 370 evalue:1.3e-131 qcov:100.00 identity:67.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF03969;
pfam_desc AFG1-like ATPase;
pfam_id AFG1_ATPase;
pfam_target db:Pfam-A.hmm|PF03969.16 evalue:9.2e-149 score:494.5 best_domain_score:494.3 name:AFG1_ATPase;
sprot_desc Cell division protein ZapE;
sprot_id sp|P64613|ZAPE_ECO57;
sprot_target db:uniprot_sprot|sp|P64613|ZAPE_ECO57 1 370 evalue:2.1e-101 qcov:100.00 identity:52.30;
103212 104285 CDS
ID metaerg.pl|03111
allec_ids 3.4.21.107;
allgo_ids GO:0005515; GO:0042597; GO:0004252;
allko_ids K04771;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_M;s__Pseudomonas_M indica;
genomedb_acc GCF_002091635.1;
genomedb_target db:genomedb|GCF_002091635.1|WP_084336557.1 29 352 evalue:3.3e-97 qcov:90.80 identity:58.30;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00595; PF13180; PF17820; PF00089; PF13365;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Trypsin; Trypsin-like peptidase domain;
pfam_id PDZ; PDZ_2; PDZ_6; Trypsin; Trypsin_2;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:4.4e-12 score:45.4 best_domain_score:39.5 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:3.6e-18 score:64.9 best_domain_score:61.0 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:7.2e-13 score:47.4 best_domain_score:42.7 name:PDZ_6; db:Pfam-A.hmm|PF00089.26 evalue:1.2e-12 score:47.3 best_domain_score:46.5 name:Trypsin; db:Pfam-A.hmm|PF13365.6 evalue:1.1e-36 score:126.2 best_domain_score:125.4 name:Trypsin_2;
sp YES;
sprot_desc Probable periplasmic serine endoprotease DegP-like;
sprot_id sp|A4XSC0|DEGPL_PSEMY;
sprot_target db:uniprot_sprot|sp|A4XSC0|DEGPL_PSEMY 43 352 evalue:1.1e-70 qcov:86.80 identity:45.90;
103212 103301 signal_peptide
ID metaerg.pl|03112
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
105860 104517 CDS
ID metaerg.pl|03113
allec_ids 1.1.1.23;
allgo_ids GO:0000105; GO:0004399; GO:0008270; GO:0051287; GO:0055114;
allko_ids K00013; K01496;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Rugosibacter;s__Rugosibacter sp002842395;
genomedb_acc GCA_002842395.1;
genomedb_target db:genomedb|GCA_002842395.1|PKO83484.1 14 440 evalue:1.4e-145 qcov:95.50 identity:65.60;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PRPP-PWY; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; HISTIDINE-SYN;;
pfam_acc PF00815;
pfam_desc Histidinol dehydrogenase;
pfam_id Histidinol_dh;
pfam_target db:Pfam-A.hmm|PF00815.20 evalue:1.2e-161 score:537.5 best_domain_score:537.2 name:Histidinol_dh;
sprot_desc Histidinol dehydrogenase;
sprot_id sp|Q87WV5|HISX_PSESM;
sprot_target db:uniprot_sprot|sp|Q87WV5|HISX_PSESM 8 437 evalue:1.5e-141 qcov:96.20 identity:60.90;
tigrfam_acc TIGR00069;
tigrfam_desc histidinol dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name hisD;
tigrfam_sub1role Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00069 evalue:3e-155 score:516.4 best_domain_score:516.2 name:TIGR00069;
106501 105857 CDS
ID metaerg.pl|03114
allec_ids 2.4.2.17;
allgo_ids GO:0000105; GO:0003879; GO:0005737; GO:0005524;
allko_ids K00765;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Zooshikellaceae;g__Zooshikella;s__Zooshikella ganghwensis;
genomedb_acc GCF_000428585.1;
genomedb_target db:genomedb|GCF_000428585.1|WP_027707889.1 2 209 evalue:2.0e-68 qcov:97.20 identity:64.40;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id HISTSYN-PWY; PRPP-PWY;
metacyc_pathway_name L-histidine biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type HISTIDINE-SYN;; Super-Pathways;;
pfam_acc PF01634;
pfam_desc ATP phosphoribosyltransferase;
pfam_id HisG;
pfam_target db:Pfam-A.hmm|PF01634.18 evalue:6.7e-43 score:145.7 best_domain_score:145.4 name:HisG;
sprot_desc ATP phosphoribosyltransferase;
sprot_id sp|A4XQN5|HIS1_PSEMY;
sprot_target db:uniprot_sprot|sp|A4XQN5|HIS1_PSEMY 1 209 evalue:2.5e-70 qcov:97.70 identity:64.80;
tigrfam_acc TIGR00070;
tigrfam_desc ATP phosphoribosyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name hisG;
tigrfam_sub1role Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00070 evalue:5.9e-52 score:175.4 best_domain_score:175.1 name:TIGR00070;
107760 106498 CDS
ID metaerg.pl|03115
allec_ids 2.5.1.7;
allgo_ids GO:0016765; GO:0005737; GO:0008760; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360; GO:0019277;
allko_ids K00790;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Marinobacterium;s__Marinobacterium halophilum;
genomedb_acc GCF_003014615.1;
genomedb_target db:genomedb|GCF_003014615.1|WP_106591251.1 1 420 evalue:1.2e-170 qcov:100.00 identity:72.10;
kegg_pathway_id 00530;
kegg_pathway_name Aminosugars metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-5265; PWY-6385; PWY-6387; PWY-6470; PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6386;
metacyc_pathway_name peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis III (mycobacteria);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;;
pfam_acc PF00275;
pfam_desc EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase);
pfam_id EPSP_synthase;
pfam_target db:Pfam-A.hmm|PF00275.20 evalue:3.7e-110 score:367.7 best_domain_score:367.6 name:EPSP_synthase;
sprot_desc UDP-N-acetylglucosamine 1-carboxyvinyltransferase;
sprot_id sp|Q2SBJ4|MURA_HAHCH;
sprot_target db:uniprot_sprot|sp|Q2SBJ4|MURA_HAHCH 1 420 evalue:1.1e-170 qcov:100.00 identity:71.90;
tigrfam_acc TIGR01072;
tigrfam_desc UDP-N-acetylglucosamine 1-carboxyvinyltransferase;
tigrfam_mainrole Cell envelope;
tigrfam_name murA;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01072 evalue:8.1e-175 score:580.7 best_domain_score:580.5 name:TIGR01072;
108070 107765 CDS
ID metaerg.pl|03116
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Tamilnaduibacter;s__Tamilnaduibacter sp002717955;
genomedb_acc GCA_002717955.1;
genomedb_target db:genomedb|GCA_002717955.1|MBH86377.1 21 99 evalue:1.8e-08 qcov:78.20 identity:38.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01722;
pfam_desc BolA-like protein;
pfam_id BolA;
pfam_target db:Pfam-A.hmm|PF01722.18 evalue:1.3e-06 score:27.8 best_domain_score:27.6 name:BolA;
108816 108133 CDS
ID metaerg.pl|03117
allgo_ids GO:0042597;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__Porticoccus;s__Porticoccus hydrocarbonoclasticus;
genomedb_acc GCF_000744735.1;
genomedb_target db:genomedb|GCF_000744735.1|WP_081890836.1 25 222 evalue:1.2e-31 qcov:87.20 identity:38.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF05494;
pfam_desc MlaC protein;
pfam_id MlaC;
pfam_target db:Pfam-A.hmm|PF05494.12 evalue:1.2e-40 score:138.2 best_domain_score:137.9 name:MlaC;
sp YES;
sprot_desc Toluene tolerance protein ttg2D;
sprot_id sp|Q9Z3Z9|TTG2D_PSEPU;
sprot_target db:uniprot_sprot|sp|Q9Z3Z9|TTG2D_PSEPU 43 214 evalue:1.6e-27 qcov:75.80 identity:38.50;
108133 108210 signal_peptide
ID metaerg.pl|03118
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
109132 110076 CDS
ID metaerg.pl|03119
allgo_ids GO:0016021; GO:0055085; GO:0005886; GO:0015297;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003228415;
genomedb_acc GCA_003228415.1;
genomedb_target db:genomedb|GCA_003228415.1|QIDL01000361.1_7 1 314 evalue:4.9e-92 qcov:100.00 identity:60.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01699;
pfam_desc Sodium/calcium exchanger protein;
pfam_id Na_Ca_ex;
pfam_target db:Pfam-A.hmm|PF01699.24 evalue:6.1e-46 score:155.3 best_domain_score:83.3 name:Na_Ca_ex;
sprot_desc Putative antiporter CaxA;
sprot_id sp|Q0ZAI3|CAXA_ALKAM;
sprot_target db:uniprot_sprot|sp|Q0ZAI3|CAXA_ALKAM 1 312 evalue:1.3e-56 qcov:99.40 identity:43.80;
tigrfam_acc TIGR00367;
tigrfam_desc K+-dependent Na+/Ca+ exchanger homolog;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00367;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00367 evalue:3.4e-62 score:209.5 best_domain_score:209.3 name:TIGR00367;
tm_num 8;
109132 110076 transmembrane_helix
ID metaerg.pl|03120
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology o109222-109290i109348-109416o109474-109542i109633-109692o109735-109803i109822-109890o109918-109977i109996-110064o;
110089 110661 CDS
ID metaerg.pl|03121
allec_ids 3.1.3.45;
allgo_ids GO:0019143; GO:0046872; GO:0009103;
allko_ids K03270;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Acidithiobacillales;f__Acidithiobacillaceae;g__Thermithiobacillus;s__Thermithiobacillus tepidarius;
genomedb_acc GCF_000423825.1;
genomedb_target db:genomedb|GCF_000423825.1|WP_028990166.1 20 190 evalue:1.1e-46 qcov:90.00 identity:56.70;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id LPSSYN-PWY; PWY-1269; KDO-NAGLIPASYN-PWY; PWY-5111;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; CMP-3-deoxy-D-manno-octulosonate biosynthesis;; superpathway of (Kdo)2-lipid A biosynthesis;; ;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; CMP-KDO-Biosynthesis; CMP-Sugar-Biosynthesis;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ;
pfam_acc PF00702; PF08282;
pfam_desc haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase;
pfam_id Hydrolase; Hydrolase_3;
pfam_target db:Pfam-A.hmm|PF00702.26 evalue:9.9e-11 score:41.5 best_domain_score:32.6 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:4e-10 score:39.1 best_domain_score:20.8 name:Hydrolase_3;
sprot_desc 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC;
sprot_id sp|P0ABZ5|KDSC_ECO57;
sprot_target db:uniprot_sprot|sp|P0ABZ5|KDSC_ECO57 11 183 evalue:1.2e-36 qcov:91.10 identity:45.70;
tigrfam_acc TIGR01670;
tigrfam_desc 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family;
tigrfam_mainrole Cell envelope;
tigrfam_name KdsC-phosphatas;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01670 evalue:8.2e-47 score:158.1 best_domain_score:157.9 name:TIGR01670;
110756 111421 CDS
ID metaerg.pl|03122
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000252.1_12 6 219 evalue:3.7e-22 qcov:96.80 identity:34.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF06835;
pfam_desc Lipopolysaccharide-assembly, LptC-related;
pfam_id LptC;
pfam_target db:Pfam-A.hmm|PF06835.13 evalue:1.3e-25 score:89.2 best_domain_score:48.4 name:LptC;
sp YES;
tigrfam_acc TIGR04409;
tigrfam_desc LPS export ABC transporter periplasmic protein LptC;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name LptC_YrbK;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04409 evalue:4.7e-26 score:90.6 best_domain_score:47.4 name:TIGR04409;
tm_num 1;
110756 110851 signal_peptide
ID metaerg.pl|03123
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
110756 111421 transmembrane_helix
ID metaerg.pl|03124
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
topology o110765-110818i;
111418 111945 CDS
ID metaerg.pl|03125
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__IMCC2047;g__IMCC2047;s__IMCC2047 sp001593685;
genomedb_acc GCA_001593685.1;
genomedb_target db:genomedb|GCA_001593685.1|LUKI01000101.1_5 5 171 evalue:2.9e-25 qcov:95.40 identity:41.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF03968;
pfam_desc OstA-like protein;
pfam_id OstA;
pfam_target db:Pfam-A.hmm|PF03968.14 evalue:1e-21 score:76.5 best_domain_score:76.2 name:OstA;
sp YES;
tigrfam_acc TIGR03002;
tigrfam_desc lipopolysaccharide transport periplasmic protein LptA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name outer_YhbN_LptA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR03002 evalue:4e-38 score:129.7 best_domain_score:129.5 name:TIGR03002;
111418 111483 signal_peptide
ID metaerg.pl|03126
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
111942 112676 CDS
ID metaerg.pl|03127
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0043190; GO:0005737; GO:0005886; GO:0016887; GO:0015437; GO:0055085;
allko_ids K11072; K02045; K01996; K06861; K02071; K11084; K02017; K01997; K05847; K02010; K02006; K02052; K02000; K11962; K01990; K02023; K05816; K01995; K02049; K01998; K10111;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Oceanospirillum;s__Oceanospirillum linum;
genomedb_acc GCF_001995095.2;
genomedb_target db:genomedb|GCF_001995095.2|WP_078320301.1 4 244 evalue:6.0e-90 qcov:98.80 identity:71.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
metacyc_pathway_id PWY-6135; PWY-6171; PWY-6188; PWY-6166; PWYG-321; PWY-6113;
metacyc_pathway_name ; ; ; ; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF13304; PF00005; PF12399;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; Branched-chain amino acid ATP-binding cassette transporter;
pfam_id AAA_21; ABC_tran; BCA_ABC_TP_C;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.8e-06 score:27.2 best_domain_score:16.3 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.2e-33 score:114.9 best_domain_score:114.3 name:ABC_tran; db:Pfam-A.hmm|PF12399.8 evalue:4e-08 score:32.2 best_domain_score:31.4 name:BCA_ABC_TP_C;
sprot_desc Lipopolysaccharide export system ATP-binding protein LptB;
sprot_id sp|P45073|LPTB_HAEIN;
sprot_target db:uniprot_sprot|sp|P45073|LPTB_HAEIN 4 244 evalue:9.4e-82 qcov:98.80 identity:61.80;
tigrfam_acc TIGR04406;
tigrfam_desc LPS export ABC transporter ATP-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name LPS_export_lptB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04406 evalue:2.1e-111 score:370.1 best_domain_score:369.9 name:TIGR04406;
112762 114273 CDS
ID metaerg.pl|03128
allgo_ids GO:0001216; GO:0016987; GO:0003677; GO:0003899; GO:0006352; GO:0009399;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000097.1_10 1 503 evalue:2.1e-169 qcov:100.00 identity:60.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00309; PF04963; PF04552;
pfam_desc Sigma-54 factor, Activator interacting domain (AID) ; Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain;
pfam_id Sigma54_AID; Sigma54_CBD; Sigma54_DBD;
pfam_target db:Pfam-A.hmm|PF00309.20 evalue:1.3e-16 score:59.4 best_domain_score:58.1 name:Sigma54_AID; db:Pfam-A.hmm|PF04963.13 evalue:6.9e-58 score:194.7 best_domain_score:193.7 name:Sigma54_CBD; db:Pfam-A.hmm|PF04552.13 evalue:8.7e-70 score:232.8 best_domain_score:232.1 name:Sigma54_DBD;
sprot_desc RNA polymerase sigma-54 factor;
sprot_id sp|P08623|RP54_AZOVI;
sprot_target db:uniprot_sprot|sp|P08623|RP54_AZOVI 1 503 evalue:5.3e-164 qcov:100.00 identity:60.60;
tigrfam_acc TIGR02395;
tigrfam_desc RNA polymerase sigma-54 factor;
tigrfam_mainrole Transcription;
tigrfam_name rpoN_sigma;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR02395 evalue:1.8e-148 score:494.4 best_domain_score:494.1 name:TIGR02395;
114334 114648 CDS
ID metaerg.pl|03129
allgo_ids GO:0044238; GO:0006417;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Zooshikellaceae;g__Zooshikella;s__Zooshikella ganghwensis;
genomedb_acc GCF_000428585.1;
genomedb_target db:genomedb|GCF_000428585.1|WP_027707874.1 1 103 evalue:4.5e-26 qcov:99.00 identity:60.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF02482;
pfam_desc Sigma 54 modulation protein / S30EA ribosomal protein;
pfam_id Ribosomal_S30AE;
pfam_target db:Pfam-A.hmm|PF02482.19 evalue:4.6e-28 score:97.1 best_domain_score:96.8 name:Ribosomal_S30AE;
sprot_desc Ribosome hibernation promoting factor;
sprot_id sp|P17160|HPF_AZOVI;
sprot_target db:uniprot_sprot|sp|P17160|HPF_AZOVI 1 98 evalue:1.2e-25 qcov:94.20 identity:57.10;
tigrfam_acc TIGR00741;
tigrfam_desc ribosomal subunit interface protein;
tigrfam_mainrole Protein synthesis;
tigrfam_name yfiA;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00741 evalue:1.3e-29 score:101.8 best_domain_score:101.6 name:TIGR00741;
114757 115236 CDS
ID metaerg.pl|03130
allgo_ids GO:0005737; GO:0016301; GO:0030295; GO:0008982; GO:0009401; GO:0032412;
allko_ids K11199; K02795; K11198; K11200; K02793; K11201; K02794; K11203; K02770; K11202; K02768; K02769; K02806;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Zooshikellaceae;g__Zooshikella;s__Zooshikella ganghwensis;
genomedb_acc GCF_000428585.1;
genomedb_target db:genomedb|GCF_000428585.1|WP_027707873.1 1 149 evalue:7.3e-36 qcov:93.70 identity:52.30;
kegg_pathway_id 02060;
kegg_pathway_name Phosphotransferase system (PTS);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00359;
pfam_desc Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2;
pfam_id PTS_EIIA_2;
pfam_target db:Pfam-A.hmm|PF00359.22 evalue:1.6e-35 score:121.3 best_domain_score:121.1 name:PTS_EIIA_2;
sprot_desc Nitrogen regulatory protein;Phosphotransferase enzyme IIA component;
sprot_id sp|Q9HVV4|PTSN_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HVV4|PTSN_PSEAE 1 147 evalue:1.2e-29 qcov:92.50 identity:45.60;
115241 116095 CDS
ID metaerg.pl|03131
allgo_ids GO:0005524; GO:0005525;
allko_ids K06958;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000252.1_18 1 284 evalue:6.6e-88 qcov:100.00 identity:61.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF03668;
pfam_desc P-loop ATPase protein family;
pfam_id ATP_bind_2;
pfam_target db:Pfam-A.hmm|PF03668.15 evalue:3.9e-89 score:297.9 best_domain_score:297.8 name:ATP_bind_2;
sprot_desc Nucleotide-binding protein CJA_2809;
sprot_id sp|B3PBZ8|Y2809_CELJU;
sprot_target db:uniprot_sprot|sp|B3PBZ8|Y2809_CELJU 1 283 evalue:2.8e-61 qcov:99.60 identity:44.50;
116102 116371 CDS
ID metaerg.pl|03132
allgo_ids GO:0005737; GO:0009401;
allko_ids K02821; K02812; K02794; K11189; K02744; K05881; K02793;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Neptunomonas;s__Neptunomonas phycophila;
genomedb_acc GCF_001922575.1;
genomedb_target db:genomedb|GCF_001922575.1|WP_075172833.1 1 89 evalue:2.9e-18 qcov:100.00 identity:57.30;
kegg_pathway_id 02060;
kegg_pathway_name Phosphotransferase system (PTS);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF00381;
pfam_desc PTS HPr component phosphorylation site;
pfam_id PTS-HPr;
pfam_target db:Pfam-A.hmm|PF00381.19 evalue:1.8e-26 score:91.4 best_domain_score:91.3 name:PTS-HPr;
sprot_desc Phosphocarrier protein HPr;
sprot_id sp|Q9HVV2|PTHP_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HVV2|PTHP_PSEAE 6 89 evalue:4.7e-15 qcov:94.40 identity:56.50;
tigrfam_acc TIGR01003;
tigrfam_desc phosphocarrier, HPr family;
tigrfam_mainrole Signal transduction;
tigrfam_name PTS_HPr_family;
tigrfam_sub1role PTS;
tigrfam_target db:TIGRFAMs.hmm|TIGR01003 evalue:2.1e-26 score:90.8 best_domain_score:90.7 name:TIGR01003;
117759 116395 CDS
ID metaerg.pl|03133
allec_ids 3.4.-.-;
allgo_ids GO:0006508; GO:0008237; GO:0005737;
allko_ids K03592;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_B;s__Pseudomonas_B oryzihabitans_B;
genomedb_acc GCF_001650425.1;
genomedb_target db:genomedb|GCF_001650425.1|WP_017642375.1 19 454 evalue:9.4e-145 qcov:96.00 identity:60.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF01523;
pfam_desc Putative modulator of DNA gyrase;
pfam_id PmbA_TldD;
pfam_target db:Pfam-A.hmm|PF01523.16 evalue:5.3e-62 score:209.4 best_domain_score:209.0 name:PmbA_TldD;
sprot_desc Metalloprotease PmbA;
sprot_id sp|P0AFK1|PMBA_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFK1|PMBA_ECO57 20 453 evalue:3.2e-107 qcov:95.60 identity:48.40;
117904 118452 CDS
ID metaerg.pl|03134
allko_ids K09889;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Marinobacterium;s__Marinobacterium stanieri;
genomedb_acc GCF_900155945.1;
genomedb_target db:genomedb|GCF_900155945.1|WP_010322871.1 6 169 evalue:2.5e-32 qcov:90.10 identity:49.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0630796; 12.832; 0.257035; ; 13.1521;
pfam_acc PF04751;
pfam_desc Protein of unknown function (DUF615);
pfam_id DUF615;
pfam_target db:Pfam-A.hmm|PF04751.14 evalue:7.8e-45 score:151.8 best_domain_score:151.6 name:DUF615;
sprot_desc hypothetical protein;
sprot_id sp|Q3KI17|Y846_PSEPF;
sprot_target db:uniprot_sprot|sp|Q3KI17|Y846_PSEPF 11 169 evalue:2.9e-27 qcov:87.40 identity:44.40;
>Feature NODE_16_length_116419_cov_91.8361
1020 313 CDS
ID metaerg.pl|03135
allgo_ids GO:0005886; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084634793.1 1 235 evalue:5.7e-61 qcov:100.00 identity:59.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF10099;
pfam_desc Anti-sigma-K factor rskA;
pfam_id RskA;
pfam_target db:Pfam-A.hmm|PF10099.9 evalue:1.9e-23 score:82.9 best_domain_score:82.9 name:RskA;
tm_num 1;
1020 313 transmembrane_helix
ID metaerg.pl|03136
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i613-681o;
1589 1017 CDS
ID metaerg.pl|03137
allgo_ids GO:0003700; GO:0006352; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481985.1 1 190 evalue:3.0e-68 qcov:100.00 identity:71.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF04542; PF08281;
pfam_desc Sigma-70 region 2 ; Sigma-70, region 4;
pfam_id Sigma70_r2; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF04542.14 evalue:3.6e-18 score:64.3 best_domain_score:64.3 name:Sigma70_r2; db:Pfam-A.hmm|PF08281.12 evalue:5.4e-10 score:38.0 best_domain_score:37.0 name:Sigma70_r4_2;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:8.6e-24 score:83.2 best_domain_score:83.0 name:TIGR02937;
1782 2555 CDS
ID metaerg.pl|03138
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_100319124.1 1 257 evalue:2.0e-104 qcov:100.00 identity:73.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF14339;
pfam_desc Domain of unknown function (DUF4394);
pfam_id DUF4394;
pfam_target db:Pfam-A.hmm|PF14339.6 evalue:1.1e-44 score:151.8 best_domain_score:150.6 name:DUF4394;
sp YES;
1782 1841 signal_peptide
ID metaerg.pl|03139
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
3618 4967 CDS
ID metaerg.pl|03140
allec_ids 1.1.1.22;
allgo_ids GO:0016616; GO:0051287; GO:0055114; GO:0003979; GO:0045227; GO:0006065;
allko_ids K00066; K02474; K00012; K02472; K13015;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481425.1 1 449 evalue:1.1e-230 qcov:100.00 identity:90.60;
kegg_pathway_id 00040; 00530; 00500; 02020; 00520; 00051;
kegg_pathway_name Pentose and glucuronate interconversions; Aminosugars metabolism; Starch and sucrose metabolism; Two-component system - General; Nucleotide sugars metabolism; Fructose and mannose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-6415; PWY-4821; PWY-3821; COLANSYN-PWY; PWY-5114;
metacyc_pathway_name L-ascorbate biosynthesis V;; UDP-α-D-xylose biosynthesis;; D-galactose detoxification;; colanic acid building blocks biosynthesis;; UDP-sugars interconversion;;
metacyc_pathway_type Ascorbate-Biosynthesis; Super-Pathways;; Super-Pathways; UDP-Sugar-Biosynthesis;; Detoxification;; Carbohydrates-Biosynthesis; Super-Pathways;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;;
pfam_acc PF00984; PF03720; PF03721;
pfam_desc UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain;
pfam_id UDPG_MGDP_dh; UDPG_MGDP_dh_C; UDPG_MGDP_dh_N;
pfam_target db:Pfam-A.hmm|PF00984.19 evalue:1.3e-39 score:133.5 best_domain_score:132.6 name:UDPG_MGDP_dh; db:Pfam-A.hmm|PF03720.15 evalue:4.4e-29 score:100.2 best_domain_score:89.9 name:UDPG_MGDP_dh_C; db:Pfam-A.hmm|PF03721.14 evalue:1.9e-66 score:222.5 best_domain_score:221.9 name:UDPG_MGDP_dh_N;
sp YES;
sprot_desc UDP-glucose 6-dehydrogenase;
sprot_id sp|O54068|UDG_RHIME;
sprot_target db:uniprot_sprot|sp|O54068|UDG_RHIME 1 434 evalue:1.1e-149 qcov:96.70 identity:60.10;
tigrfam_acc TIGR03026;
tigrfam_desc nucleotide sugar dehydrogenase;
tigrfam_name NDP-sugDHase;
tigrfam_target db:TIGRFAMs.hmm|TIGR03026 evalue:3.9e-137 score:456.5 best_domain_score:456.3 name:TIGR03026;
3618 3668 lipoprotein_signal_peptide
ID metaerg.pl|03141
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
4964 5986 CDS
ID metaerg.pl|03142
allec_ids 5.1.3.12;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0050379;
allko_ids K01711; K01784; K08679;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470067.1 1 340 evalue:4.8e-162 qcov:100.00 identity:81.20;
kegg_pathway_id 00052; 00500; 00520; 00051;
kegg_pathway_name Galactose metabolism; Starch and sucrose metabolism; Nucleotide sugars metabolism; Fructose and mannose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF01073; PF00106; PF01370; PF16363; PF07993; PF02719; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; short chain dehydrogenase; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; Male sterility protein; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id 3Beta_HSD; adh_short; Epimerase; GDP_Man_Dehyd; NAD_binding_4; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:6e-12 score:44.4 best_domain_score:44.0 name:3Beta_HSD; db:Pfam-A.hmm|PF00106.25 evalue:1.5e-06 score:27.0 best_domain_score:25.5 name:adh_short; db:Pfam-A.hmm|PF01370.21 evalue:2.9e-48 score:163.7 best_domain_score:163.4 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:2.2e-53 score:181.1 best_domain_score:180.9 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF07993.12 evalue:2.5e-10 score:39.2 best_domain_score:32.0 name:NAD_binding_4; db:Pfam-A.hmm|PF02719.15 evalue:1e-10 score:40.5 best_domain_score:38.4 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:5.6e-15 score:54.4 best_domain_score:53.7 name:RmlD_sub_bind;
sprot_desc UDP-glucuronate 5'-epimerase;
sprot_id sp|O54067|LPSL_RHIME;
sprot_target db:uniprot_sprot|sp|O54067|LPSL_RHIME 3 332 evalue:4.5e-106 qcov:97.10 identity:56.90;
5990 6550 CDS
ID metaerg.pl|03143
allec_ids 5.1.3.13;
allgo_ids GO:0008830; GO:0005829; GO:0006974; GO:0019305; GO:0045226; GO:0009103; GO:0009243; GO:0046677; GO:0009411;
allko_ids K01790;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480190.1 1 184 evalue:2.1e-90 qcov:98.90 identity:82.10;
kegg_pathway_id 00520; 00521; 00523;
kegg_pathway_name Nucleotide sugars metabolism; Streptomycin biosynthesis; Polyketide sugar unit biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id DTDPRHAMSYN-PWY; OANTIGEN-PWY; PWY-6404;
metacyc_pathway_name dTDP-L-rhamnose biosynthesis;; O-antigen building blocks biosynthesis (E. coli);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type dTDP-Sugar-Biosynthesis;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF00908;
pfam_desc dTDP-4-dehydrorhamnose 3,5-epimerase;
pfam_id dTDP_sugar_isom;
pfam_target db:Pfam-A.hmm|PF00908.17 evalue:2.1e-65 score:218.8 best_domain_score:218.6 name:dTDP_sugar_isom;
sprot_desc dTDP-4-dehydrorhamnose 3,5-epimerase;
sprot_id sp|P37745|RMLC_ECOLI;
sprot_target db:uniprot_sprot|sp|P37745|RMLC_ECOLI 1 175 evalue:3.4e-39 qcov:94.10 identity:46.90;
tigrfam_acc TIGR01221;
tigrfam_desc dTDP-4-dehydrorhamnose 3,5-epimerase;
tigrfam_mainrole Cell envelope;
tigrfam_name rmlC;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01221 evalue:4.2e-61 score:205.0 best_domain_score:204.8 name:TIGR01221;
6547 7587 CDS
ID metaerg.pl|03144
allec_ids 4.2.1.46;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0008460; GO:0019305; GO:0045226; GO:0009103; GO:0009243;
allko_ids K01711; K01784; K01710;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter_A;s__Pseudorhodobacter_A sp001828855;
genomedb_acc GCA_001828855.1;
genomedb_target db:genomedb|GCA_001828855.1|OHC59678.1 1 343 evalue:2.4e-177 qcov:99.10 identity:86.30;
kegg_pathway_id 00052; 00523; 00521; 00051; 00520; 01055;
kegg_pathway_name Galactose metabolism; Polyketide sugar unit biosynthesis; Streptomycin biosynthesis; Fructose and mannose metabolism; Nucleotide sugars metabolism; Biosynthesis of vancomycin group antibiotics;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-3221; OANTIGEN-PWY; ECASYN-PWY; DTDPRHAMSYN-PWY; PWY-6404;
metacyc_pathway_name ; O-antigen building blocks biosynthesis (E. coli);; enterobacterial common antigen biosynthesis;; dTDP-L-rhamnose biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type ; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; dTDP-Sugar-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF01073; PF00106; PF01370; PF16363; PF07993; PF02719; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; short chain dehydrogenase; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; Male sterility protein; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id 3Beta_HSD; adh_short; Epimerase; GDP_Man_Dehyd; NAD_binding_4; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:5e-13 score:47.9 best_domain_score:46.9 name:3Beta_HSD; db:Pfam-A.hmm|PF00106.25 evalue:2e-08 score:33.1 best_domain_score:19.7 name:adh_short; db:Pfam-A.hmm|PF01370.21 evalue:2.8e-72 score:242.3 best_domain_score:242.0 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:2.4e-97 score:325.5 best_domain_score:325.4 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF07993.12 evalue:1.6e-11 score:43.1 best_domain_score:37.2 name:NAD_binding_4; db:Pfam-A.hmm|PF02719.15 evalue:2.4e-12 score:45.8 best_domain_score:44.6 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:3e-19 score:68.5 best_domain_score:67.8 name:RmlD_sub_bind;
sprot_desc dTDP-glucose 4,6-dehydratase;
sprot_id sp|P55294|RMLB_NEIMB;
sprot_target db:uniprot_sprot|sp|P55294|RMLB_NEIMB 2 345 evalue:9.1e-131 qcov:99.40 identity:64.50;
tigrfam_acc TIGR01181;
tigrfam_desc dTDP-glucose 4,6-dehydratase;
tigrfam_mainrole Cell envelope;
tigrfam_name dTDP_gluc_dehyt;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01181 evalue:4.4e-147 score:488.4 best_domain_score:488.3 name:TIGR01181;
7584 8441 CDS
ID metaerg.pl|03145
allec_ids 1.1.1.133;
allgo_ids GO:0003824; GO:0050662; GO:0008831; GO:0046872; GO:0019305; GO:0045226;
allko_ids K00067;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06623.1 1 284 evalue:1.8e-109 qcov:99.60 identity:74.60;
kegg_pathway_id 00520; 00523; 00521;
kegg_pathway_name Nucleotide sugars metabolism; Polyketide sugar unit biosynthesis; Streptomycin biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id OANTIGEN-PWY; DTDPRHAMSYN-PWY; PWY-6404;
metacyc_pathway_name O-antigen building blocks biosynthesis (E. coli);; dTDP-L-rhamnose biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; dTDP-Sugar-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF01370; PF16363; PF07993; PF02719; PF04321;
pfam_desc NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; Male sterility protein; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id Epimerase; GDP_Man_Dehyd; NAD_binding_4; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01370.21 evalue:3.5e-16 score:58.6 best_domain_score:57.9 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:6.4e-10 score:38.2 best_domain_score:37.7 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF07993.12 evalue:0.0001 score:20.8 best_domain_score:19.2 name:NAD_binding_4; db:Pfam-A.hmm|PF02719.15 evalue:2.1e-07 score:29.6 best_domain_score:26.5 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:5.5e-97 score:323.5 best_domain_score:323.4 name:RmlD_sub_bind;
sprot_desc dTDP-4-dehydrorhamnose reductase;
sprot_id sp|P55463|RMLD_SINFN;
sprot_target db:uniprot_sprot|sp|P55463|RMLD_SINFN 1 284 evalue:5.7e-54 qcov:99.60 identity:44.00;
tigrfam_acc TIGR01214;
tigrfam_desc dTDP-4-dehydrorhamnose reductase;
tigrfam_mainrole Cell envelope;
tigrfam_name rmlD;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01214 evalue:2.3e-87 score:291.9 best_domain_score:291.7 name:TIGR01214;
8438 9328 CDS
ID metaerg.pl|03146
allec_ids 2.7.7.24;
allgo_ids GO:0009058; GO:0016779; GO:0008879; GO:0046872; GO:0019305; GO:0045226; GO:0009243;
allko_ids K00975; K00640; K00677; K04042; K02536; K00963; K01840; K00966; K11528; K00972; K00973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068305946.1 8 292 evalue:3.4e-135 qcov:96.30 identity:81.80;
kegg_pathway_id 00051; 00040; 00530; 00052; 00920; 00520; 00272; 00500; 00521; 00523; 00540;
kegg_pathway_name Fructose and mannose metabolism; Pentose and glucuronate interconversions; Aminosugars metabolism; Galactose metabolism; Sulfur metabolism; Nucleotide sugars metabolism; Cysteine metabolism; Starch and sucrose metabolism; Streptomycin biosynthesis; Polyketide sugar unit biosynthesis; Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-6404; ECASYN-PWY; DTDPRHAMSYN-PWY; OANTIGEN-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; enterobacterial common antigen biosynthesis;; dTDP-L-rhamnose biosynthesis;; O-antigen building blocks biosynthesis (E. coli);;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; dTDP-Sugar-Biosynthesis;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;;
pfam_acc PF00483; PF12804;
pfam_desc Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF00483.23 evalue:1.1e-63 score:214.3 best_domain_score:214.0 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:5.5e-10 score:39.1 best_domain_score:38.7 name:NTP_transf_3;
sprot_desc Glucose-1-phosphate thymidylyltransferase;
sprot_id sp|B0RVK9|RMLA_XANCB;
sprot_target db:uniprot_sprot|sp|B0RVK9|RMLA_XANCB 8 294 evalue:1.1e-100 qcov:97.00 identity:62.40;
tigrfam_acc TIGR01207;
tigrfam_desc glucose-1-phosphate thymidylyltransferase;
tigrfam_mainrole Cell envelope;
tigrfam_name rmlA;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01207 evalue:7.4e-132 score:437.9 best_domain_score:437.7 name:TIGR01207;
10950 9682 CDS
ID metaerg.pl|03147
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas daqiaonensis;
genomedb_acc GCF_900109725.1;
genomedb_target db:genomedb|GCF_900109725.1|WP_089710224.1 9 387 evalue:3.0e-52 qcov:89.80 identity:33.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF14907;
pfam_desc Uncharacterised nucleotidyltransferase;
pfam_id NTP_transf_5;
pfam_target db:Pfam-A.hmm|PF14907.6 evalue:3.4e-29 score:101.4 best_domain_score:100.8 name:NTP_transf_5;
13361 11109 CDS
ID metaerg.pl|03148
allgo_ids GO:0000155; GO:0007165;
allko_ids K07644; K07709; K13532; K06379; K10681; K07676; K07650; K01769; K07675; K07717; K10942; K13040; K07647; K10125; K11629; K11357; K11617; K04757; K07769; K11520; K14509; K12767; K13761; K02486; K11383; K07656; K01768; K07640; K07710; K07716; K02489; K07697; K10916; K08479; K07674; K03388; K02668; K10715; K07678; K02030; K11527; K13587; K07636; K07638; K07653; K02480; K08801; K02482; K14489; K11640; K11356; K02484; K00760; K07642; K11711; K02491; K11231; K07643; K01937; K08282; K07704; K10909; K07708; K07645; K07677; K07652; K07639; K08475; K07673; K01120; K07641; K13598; K07646; K07637; K03407; K07682; K07649; K00936; K07777; K07654; K07718; K07698; K07651; K07648; K07679; K02478; K13533; K11328; K07711; K00873; K08884; K07768; K11633; K07778; K11354;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795026.1 16 744 evalue:3.1e-254 qcov:97.20 identity:64.10;
kegg_pathway_id 00240; 00230; 05111; 00983; 00710; 00010; 00790; 00620; 03090; 02020; 04011;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Drug metabolism - other enzymes; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Folate biosynthesis; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF02518; PF00512; PF12860; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; PAS_7; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:4.8e-29 score:100.4 best_domain_score:99.5 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:2.5e-22 score:77.9 best_domain_score:67.3 name:HisKA; db:Pfam-A.hmm|PF12860.7 evalue:4.7e-10 score:38.9 best_domain_score:37.0 name:PAS_7; db:Pfam-A.hmm|PF00072.24 evalue:4.4e-32 score:109.8 best_domain_score:83.7 name:Response_reg;
13473 14054 CDS
ID metaerg.pl|03149
allec_ids 1.-.-.-;
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795024.1 1 189 evalue:1.4e-70 qcov:97.90 identity:71.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-2821; PWY-5826; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5987; PWY-5479;
metacyc_pathway_name glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;;
metacyc_pathway_type GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;;
pfam_acc PF00881;
pfam_desc Nitroreductase family;
pfam_id Nitroreductase;
pfam_target db:Pfam-A.hmm|PF00881.24 evalue:2e-22 score:79.3 best_domain_score:78.7 name:Nitroreductase;
sprot_desc Putative NAD(P)H nitroreductase HI_1542;
sprot_id sp|P45244|Y1542_HAEIN;
sprot_target db:uniprot_sprot|sp|P45244|Y1542_HAEIN 8 168 evalue:5.6e-13 qcov:83.40 identity:30.90;
14194 14901 CDS
ID metaerg.pl|03150
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481801.1 1 233 evalue:9.9e-90 qcov:99.10 identity:76.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF07264;
pfam_desc Etoposide-induced protein 2.4 (EI24);
pfam_id EI24;
pfam_target db:Pfam-A.hmm|PF07264.11 evalue:5.8e-15 score:55.2 best_domain_score:55.0 name:EI24;
tm_num 5;
14194 14901 transmembrane_helix
ID metaerg.pl|03151
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i14251-14319o14404-14472i14563-14622o14632-14691i14752-14820o;
15151 14882 CDS
ID metaerg.pl|03152
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468673.1 1 85 evalue:2.4e-28 qcov:95.50 identity:80.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF07330;
pfam_desc Protein of unknown function (DUF1467);
pfam_id DUF1467;
pfam_target db:Pfam-A.hmm|PF07330.12 evalue:3.3e-28 score:96.7 best_domain_score:96.5 name:DUF1467;
tm_num 2;
15151 14882 transmembrane_helix
ID metaerg.pl|03153
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i14900-14953o15044-15112i;
15555 15151 CDS
ID metaerg.pl|03154
allec_ids 5.1.99.-; 5.1.99.1;
allgo_ids GO:0004493;
allko_ids K05606;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468672.1 1 134 evalue:5.9e-71 qcov:100.00 identity:97.00;
kegg_pathway_id 00640; 00280;
kegg_pathway_name Propanoate metabolism; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id P108-PWY; PROPIONMET-PWY; PWY-5328; PWY-5130; PWY-5743; PWY-5789;
metacyc_pathway_name pyruvate fermentation to propanoate I;; propanoyl CoA degradation I;; superpathway of L-methionine salvage and degradation;; 2-oxobutanoate degradation I;; 3-hydroxypropanoate cycle;; 3-hydroxypropanoate/4-hydroxybutanate cycle;;
metacyc_pathway_type Pyruvate-Propanoate-Fermentation;; Propionate-Degradation;; METHIONINE-DEG; Super-Pathways;; 2-Oxobutanoate-Degradation; Super-Pathways;; Autotrophic-CO2-Fixation;; Autotrophic-CO2-Fixation;;
pfam_acc PF00903; PF13468; PF13669;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase-like domain; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase; Glyoxalase_3; Glyoxalase_4;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:4.4e-12 score:45.5 best_domain_score:45.4 name:Glyoxalase; db:Pfam-A.hmm|PF13468.6 evalue:1.4e-07 score:31.0 best_domain_score:30.7 name:Glyoxalase_3; db:Pfam-A.hmm|PF13669.6 evalue:6.7e-22 score:77.1 best_domain_score:76.9 name:Glyoxalase_4;
sprot_desc Ethylmalonyl-CoA/methylmalonyl-CoA epimerase;
sprot_id sp|Q3IZP4|EPI_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IZP4|EPI_RHOS4 1 134 evalue:1.1e-68 qcov:100.00 identity:90.30;
tigrfam_acc TIGR03081;
tigrfam_desc methylmalonyl-CoA epimerase;
tigrfam_name metmalonyl_epim;
tigrfam_target db:TIGRFAMs.hmm|TIGR03081 evalue:4.4e-50 score:168.7 best_domain_score:168.5 name:TIGR03081;
15718 16419 CDS
ID metaerg.pl|03155
allgo_ids GO:0000160;
allko_ids K07639; K01120; K07673; K07641; K07646; K03407; K07682; K07654; K07648; K07768; K07778; K11640; K11356; K02484; K07642; K08282; K07710; K08479; K03388; K02668; K10715; K07678; K07636; K07653; K02480; K02482; K06379; K07676; K10681; K07675; K07647; K10125; K04757;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657352.1 1 233 evalue:3.9e-70 qcov:100.00 identity:61.40;
kegg_pathway_id 00230; 00790; 03090; 02020;
kegg_pathway_name Purine metabolism; Folate biosynthesis; Type II secretion system; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:5.4e-16 score:58.0 best_domain_score:57.5 name:Response_reg;
17100 16777 CDS
ID metaerg.pl|03156
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795679.1 1 107 evalue:1.9e-48 qcov:100.00 identity:90.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF03992;
pfam_desc Antibiotic biosynthesis monooxygenase;
pfam_id ABM;
pfam_target db:Pfam-A.hmm|PF03992.16 evalue:1.4e-13 score:50.0 best_domain_score:49.7 name:ABM;
17556 19535 CDS
ID metaerg.pl|03157
allgo_ids GO:0017004; GO:0020037; GO:0016021; GO:0005886; GO:0015232;
allko_ids K02198;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795682.1 1 659 evalue:0.0e+00 qcov:100.00 identity:93.80;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF16327; PF01578;
pfam_desc Cytochrome c-type biogenesis protein CcmF C-terminal; Cytochrome C assembly protein;
pfam_id CcmF_C; Cytochrom_C_asm;
pfam_target db:Pfam-A.hmm|PF16327.5 evalue:1.1e-115 score:385.6 best_domain_score:385.6 name:CcmF_C; db:Pfam-A.hmm|PF01578.20 evalue:2.8e-54 score:183.3 best_domain_score:183.3 name:Cytochrom_C_asm;
sprot_desc Cytochrome c-type biogenesis protein ccl1;
sprot_id sp|Q00500|CCMF_RHOCB;
sprot_target db:uniprot_sprot|sp|Q00500|CCMF_RHOCB 1 648 evalue:2.4e-257 qcov:98.30 identity:67.60;
tigrfam_acc TIGR00353;
tigrfam_desc cytochrome c-type biogenesis protein CcmF;
tigrfam_mainrole Energy metabolism;
tigrfam_name nrfE;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR00353 evalue:6.9e-189 score:628.6 best_domain_score:628.3 name:TIGR00353;
tm_num 15;
17556 19535 transmembrane_helix
ID metaerg.pl|03158
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o17568-17636i17673-17741o17841-17909i17928-17996o18078-18146i18180-18248o18291-18350i18375-18443o18486-18554i18612-18680o18723-18791i18828-18887o18900-18968i19029-19097o19401-19460i;
19532 19996 CDS
ID metaerg.pl|03159
allgo_ids GO:0042597; GO:0046872; GO:0017004;
allko_ids K02200;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468438.1 1 154 evalue:2.6e-62 qcov:100.00 identity:82.50;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF03918;
pfam_desc Cytochrome C biogenesis protein;
pfam_id CcmH;
pfam_target db:Pfam-A.hmm|PF03918.14 evalue:3.3e-46 score:155.4 best_domain_score:155.1 name:CcmH;
sp YES;
sprot_desc Cytochrome c-type biogenesis protein Ccl2;
sprot_id sp|Q00501|CCMH_RHOCB;
sprot_target db:uniprot_sprot|sp|Q00501|CCMH_RHOCB 11 154 evalue:1.0e-33 qcov:93.50 identity:55.60;
tm_num 1;
19532 19594 signal_peptide
ID metaerg.pl|03160
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
19532 19996 transmembrane_helix
ID metaerg.pl|03161
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o19841-19909i;
20068 20844 CDS
ID metaerg.pl|03162
allec_ids 4.2.1.17;
allgo_ids GO:0003824; GO:0004300; GO:0006631;
allko_ids K00022; K01692; K07516; K01782; K15016; K13767; K07514; K07515; K10527; K01825; K15866;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796039.1 1 258 evalue:1.5e-123 qcov:100.00 identity:88.80;
kegg_pathway_id 00310; 00281; 00280; 00930; 00632; 00380; 01040; 00903; 00062; 00650; 00640; 00071; 00592; 00410;
kegg_pathway_name Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Caprolactam degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Butanoate metabolism; Propanoate metabolism; Fatty acid metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-6435; PWY-561; VALDEG-PWY; P3-PWY; PWY-5138; FAO-PWY; ILEUDEG-PWY; PWY-5136;
metacyc_pathway_name 4-hydroxybenzoate biosynthesis III (plants);; superpathway of glyoxylate cycle and fatty acid degradation;; L-valine degradation I;; gallate degradation III (anaerobic);; unsaturated, even numbered fatty acid β-oxidation;; fatty acid β-oxidation I;; L-isoleucine degradation I;; fatty acid β-oxidation II (peroxisome);;
metacyc_pathway_type 4-Hydroxybenzoate-Biosynthesis;; Energy-Metabolism; Super-Pathways;; VALINE-DEG;; GALLATE-DEG;; Fatty-Acid-Degradation;; Fatty-Acid-Degradation;; ISOLEUCINE-DEG;; Fatty-Acid-Degradation;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:3.2e-75 score:251.9 best_domain_score:251.7 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:2.2e-31 score:108.8 best_domain_score:97.4 name:ECH_2;
sprot_desc Probable enoyl-CoA hydratase;
sprot_id sp|P24162|ECHH_RHOCB;
sprot_target db:uniprot_sprot|sp|P24162|ECHH_RHOCB 1 258 evalue:3.5e-87 qcov:100.00 identity:65.90;
21403 20864 CDS
ID metaerg.pl|03163
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470044.1 1 179 evalue:2.2e-89 qcov:100.00 identity:92.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
sp YES;
20864 20911 signal_peptide
ID metaerg.pl|03164
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
22217 21423 CDS
ID metaerg.pl|03165
allgo_ids GO:0016020;
allko_ids K09686;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245515.1 1 264 evalue:1.1e-129 qcov:100.00 identity:92.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF01061; PF12679; PF12698;
pfam_desc ABC-2 type transporter; ABC-2 family transporter protein; ABC-2 family transporter protein;
pfam_id ABC2_membrane; ABC2_membrane_2; ABC2_membrane_3;
pfam_target db:Pfam-A.hmm|PF01061.24 evalue:2.9e-34 score:117.6 best_domain_score:117.6 name:ABC2_membrane; db:Pfam-A.hmm|PF12679.7 evalue:1.2e-08 score:33.9 best_domain_score:33.9 name:ABC2_membrane_2; db:Pfam-A.hmm|PF12698.7 evalue:6.5e-14 score:51.0 best_domain_score:50.8 name:ABC2_membrane_3;
tigrfam_acc TIGR03861;
tigrfam_desc alcohol ABC transporter, permease protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name phenyl_ABC_PedC;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR03861 evalue:4.9e-127 score:422.0 best_domain_score:421.8 name:TIGR03861;
tm_num 6;
22217 21423 transmembrane_helix
ID metaerg.pl|03166
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i21501-21569o21612-21680i21738-21806o21849-21917i21942-22010o22119-22178i;
22936 22214 CDS
ID metaerg.pl|03167
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016887;
allko_ids K05816; K10111; K01998; K02049; K01995; K02000; K02023; K01990; K02017; K02006; K02052; K02010; K05847; K01997; K11072; K02045; K02071; K06861; K01996;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245516.1 3 240 evalue:1.8e-115 qcov:99.20 identity:91.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6171; PWY-6135; PWY-6188; PWY-6166;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:3.8e-31 score:107.7 best_domain_score:107.3 name:ABC_tran;
sprot_desc Linearmycin resistance ATP-binding protein LnrL;
sprot_id sp|P94440|LNRL_BACSU;
sprot_target db:uniprot_sprot|sp|P94440|LNRL_BACSU 4 226 evalue:8.5e-35 qcov:92.90 identity:37.90;
tigrfam_acc TIGR03864;
tigrfam_desc ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name PQQ_ABC_ATP;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR03864 evalue:5.3e-105 score:349.2 best_domain_score:349.1 name:TIGR03864;
23910 22936 CDS
ID metaerg.pl|03168
allko_ids K15864; K05601; K00368;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245517.1 1 323 evalue:4.4e-173 qcov:99.70 identity:94.40;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF02239; PF10282;
pfam_desc Cytochrome D1 heme domain; Lactonase, 7-bladed beta-propeller;
pfam_id Cytochrom_D1; Lactonase;
pfam_target db:Pfam-A.hmm|PF02239.16 evalue:2.3e-11 score:42.1 best_domain_score:16.0 name:Cytochrom_D1; db:Pfam-A.hmm|PF10282.9 evalue:3.8e-11 score:42.1 best_domain_score:17.5 name:Lactonase;
sp YES;
tigrfam_acc TIGR02276; TIGR03866;
tigrfam_desc 40-residue YVTN family beta-propeller repeat; PQQ-dependent catabolism-associated beta-propeller protein;
tigrfam_name beta_rpt_yvtn; PQQ_ABC_repeats;
tigrfam_target db:TIGRFAMs.hmm|TIGR02276 evalue:2.9e-38 score:128.8 best_domain_score:36.7 name:TIGR02276; db:TIGRFAMs.hmm|TIGR03866 evalue:8.2e-140 score:464.4 best_domain_score:464.2 name:TIGR03866;
22936 22998 signal_peptide
ID metaerg.pl|03169
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
25093 23924 CDS
ID metaerg.pl|03170
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470048.1 1 389 evalue:5.0e-195 qcov:100.00 identity:87.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
sp YES;
tigrfam_acc TIGR03863;
tigrfam_desc ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name PQQ_ABC_bind;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR03863 evalue:3.4e-137 score:456.3 best_domain_score:456.1 name:TIGR03863;
tm_num 1;
23924 23989 signal_peptide
ID metaerg.pl|03171
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
25093 23924 transmembrane_helix
ID metaerg.pl|03172
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i23942-24010o;
25204 25650 CDS
ID metaerg.pl|03173
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386290.1 8 148 evalue:9.1e-65 qcov:95.30 identity:85.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
sp YES;
25204 25287 signal_peptide
ID metaerg.pl|03174
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
25673 26188 CDS
ID metaerg.pl|03175
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245520.1 1 171 evalue:2.7e-76 qcov:100.00 identity:80.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
sp YES;
25673 25747 signal_peptide
ID metaerg.pl|03176
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
26310 27020 CDS
ID metaerg.pl|03177
allgo_ids GO:0009055; GO:0020037;
allko_ids K00368; K15864;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470049.1 8 236 evalue:3.2e-112 qcov:97.00 identity:87.80;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF13442; PF00034;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c;
pfam_id Cytochrome_CBB3; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:9.4e-14 score:50.7 best_domain_score:49.7 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:3.4e-05 score:24.1 best_domain_score:15.1 name:Cytochrom_C;
sp YES;
tigrfam_acc TIGR04494;
tigrfam_desc cytochrome c-550 PedF;
tigrfam_name c550_PedF;
tigrfam_target db:TIGRFAMs.hmm|TIGR04494 evalue:4.4e-50 score:168.2 best_domain_score:167.5 name:TIGR04494;
26310 26381 signal_peptide
ID metaerg.pl|03178
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
27043 27933 CDS
ID metaerg.pl|03179
allko_ids K02030; K02029; K16254;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470050.1 1 296 evalue:1.3e-142 qcov:100.00 identity:84.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00497;
pfam_desc Bacterial extracellular solute-binding proteins, family 3;
pfam_id SBP_bac_3;
pfam_target db:Pfam-A.hmm|PF00497.20 evalue:6.5e-17 score:60.9 best_domain_score:34.0 name:SBP_bac_3;
sp YES;
tm_num 1;
27043 27117 signal_peptide
ID metaerg.pl|03180
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
27043 27933 transmembrane_helix
ID metaerg.pl|03181
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i27061-27117o;
28072 29817 CDS
ID metaerg.pl|03182
allec_ids 1.1.2.8; 1.1.2.-;
allgo_ids GO:0016020; GO:0030288; GO:0005509; GO:0052935;
allko_ids K11715; K00114; K08860; K14028; K05358; K08852;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470053.1 1 581 evalue:0.0e+00 qcov:100.00 identity:94.80;
kegg_pathway_id 00010; 00400; 00640; 00680; 00650; 00631;
kegg_pathway_name Glycolysis / Gluconeogenesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Propanoate metabolism; Methane metabolism; Butanoate metabolism; 1,2-Dichloroethane degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-1882; PWY-1701;
metacyc_pathway_name superpathway of C1 compounds oxidation to CO2;; methanol and methylamine oxidation to formaldehyde;;
metacyc_pathway_type C1-COMPOUNDS; Super-Pathways;; Methanol-Oxidation; Super-Pathways;;
pfam_acc PF01011; PF13360; PF13570;
pfam_desc PQQ enzyme repeat; PQQ-like domain; PQQ-like domain;
pfam_id PQQ; PQQ_2; PQQ_3;
pfam_target db:Pfam-A.hmm|PF01011.21 evalue:6e-26 score:88.4 best_domain_score:34.3 name:PQQ; db:Pfam-A.hmm|PF13360.6 evalue:1.6e-24 score:86.0 best_domain_score:59.2 name:PQQ_2; db:Pfam-A.hmm|PF13570.6 evalue:2.9e-15 score:55.4 best_domain_score:19.6 name:PQQ_3;
sp YES;
sprot_desc Quinoprotein alcohol dehydrogenase (cytochrome c);
sprot_id sp|A8R3S4|QEDH_PSEPU;
sprot_target db:uniprot_sprot|sp|A8R3S4|QEDH_PSEPU 6 573 evalue:1.8e-171 qcov:97.80 identity:49.30;
tigrfam_acc TIGR03075;
tigrfam_desc PQQ-dependent dehydrogenase, methanol/ethanol family;
tigrfam_name PQQ_enz_alc_DH;
tigrfam_target db:TIGRFAMs.hmm|TIGR03075 evalue:1e-221 score:736.3 best_domain_score:736.1 name:TIGR03075;
28072 28131 signal_peptide
ID metaerg.pl|03183
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
29939 32047 CDS
ID metaerg.pl|03184
allgo_ids GO:0005886; GO:0003677; GO:0010181; GO:0045893;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245526.1 1 702 evalue:0.0e+00 qcov:100.00 identity:91.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF12801;
pfam_desc 4Fe-4S binding domain;
pfam_id Fer4_5;
pfam_target db:Pfam-A.hmm|PF12801.7 evalue:2.9e-12 score:45.6 best_domain_score:44.5 name:Fer4_5;
sp YES;
sprot_desc Regulatory protein NosR;
sprot_id sp|Q00790|NOSR_PSEST;
sprot_target db:uniprot_sprot|sp|Q00790|NOSR_PSEST 7 698 evalue:1.4e-90 qcov:98.60 identity:32.30;
tm_num 5;
29939 30001 signal_peptide
ID metaerg.pl|03185
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
29939 32047 transmembrane_helix
ID metaerg.pl|03186
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o31151-31210i31247-31315o31358-31426i31562-31615o31673-31741i;
32044 32964 CDS
ID metaerg.pl|03187
allgo_ids GO:0017013;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796393.1 1 300 evalue:3.1e-107 qcov:98.00 identity:67.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF02424;
pfam_desc ApbE family;
pfam_id ApbE;
pfam_target db:Pfam-A.hmm|PF02424.15 evalue:4.3e-37 score:127.3 best_domain_score:127.0 name:ApbE;
sp YES;
32044 32109 signal_peptide
ID metaerg.pl|03188
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
33835 32954 CDS
ID metaerg.pl|03189
allec_ids 4.2.1.126;
allgo_ids GO:0097367; GO:1901135; GO:0016835; GO:0016803; GO:0046348; GO:0005975; GO:0097173; GO:0009254;
allko_ids K07106;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799383.1 1 292 evalue:2.2e-118 qcov:99.70 identity:80.50;
kegg_pathway_id 00530;
kegg_pathway_name Aminosugars metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF01380;
pfam_desc SIS domain;
pfam_id SIS;
pfam_target db:Pfam-A.hmm|PF01380.22 evalue:6.4e-06 score:25.3 best_domain_score:25.3 name:SIS;
sprot_desc N-acetylmuramic acid 6-phosphate etherase;
sprot_id sp|Q9RYU5|MURQ_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RYU5|MURQ_DEIRA 2 288 evalue:3.9e-58 qcov:98.00 identity:45.50;
33998 34882 CDS
ID metaerg.pl|03190
allec_ids 2.7.1.8;
allgo_ids GO:0005737; GO:0005524; GO:0047931; GO:0016310;
allko_ids K18676;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657737.1 1 287 evalue:7.3e-98 qcov:97.60 identity:67.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF01869;
pfam_desc BadF/BadG/BcrA/BcrD ATPase family;
pfam_id BcrAD_BadFG;
pfam_target db:Pfam-A.hmm|PF01869.20 evalue:2.2e-16 score:59.4 best_domain_score:59.1 name:BcrAD_BadFG;
sprot_desc Glucosamine kinase GspK;
sprot_id sp|Q9KUA9|GSPK_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KUA9|GSPK_VIBCH 1 285 evalue:2.0e-14 qcov:96.90 identity:26.60;
34879 36018 CDS
ID metaerg.pl|03191
allec_ids 3.5.1.25;
allgo_ids GO:0016787; GO:0046872; GO:0047419; GO:0008448; GO:0005975; GO:0006046; GO:0019262; GO:0051289;
allko_ids K01443; K02079;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799390.1 1 376 evalue:6.9e-125 qcov:99.20 identity:66.00;
kegg_pathway_id 00052; 00530;
kegg_pathway_name Galactose metabolism; Aminosugars metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id P441-PWY; PWY-6517; GLUAMCAT-PWY;
metacyc_pathway_name superpathway of N-acetylneuraminate degradation;; N-acetylglucosamine degradation II;; N-acetylglucosamine degradation I;;
metacyc_pathway_type CARBOXYLATES-DEG; Super-Pathways;; N-Acetylglucosamine-Degradation; Super-Pathways;; N-Acetylglucosamine-Degradation;;
pfam_acc PF01979;
pfam_desc Amidohydrolase family;
pfam_id Amidohydro_1;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:1.4e-14 score:53.4 best_domain_score:49.2 name:Amidohydro_1;
sprot_desc N-acetylglucosamine-6-phosphate deacetylase;
sprot_id sp|P0AF19|NAGA_ECO57;
sprot_target db:uniprot_sprot|sp|P0AF19|NAGA_ECO57 3 376 evalue:1.4e-44 qcov:98.70 identity:35.30;
tigrfam_acc TIGR00221;
tigrfam_desc N-acetylglucosamine-6-phosphate deacetylase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name nagA;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR00221 evalue:1.2e-72 score:244.1 best_domain_score:243.9 name:TIGR00221;
37088 36060 CDS
ID metaerg.pl|03192
allgo_ids GO:0030288; GO:0019810; GO:0015847;
allko_ids K11073;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479877.1 1 342 evalue:4.2e-190 qcov:100.00 identity:91.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF01547; PF13531; PF13343; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_11; SBP_bac_6; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:3.1e-15 score:56.2 best_domain_score:34.9 name:SBP_bac_1; db:Pfam-A.hmm|PF13531.6 evalue:1.9e-08 score:33.6 best_domain_score:30.5 name:SBP_bac_11; db:Pfam-A.hmm|PF13343.6 evalue:6.7e-22 score:77.3 best_domain_score:76.8 name:SBP_bac_6; db:Pfam-A.hmm|PF13416.6 evalue:2.6e-26 score:92.3 best_domain_score:92.0 name:SBP_bac_8;
sp YES;
sprot_desc Putrescine-binding periplasmic protein;
sprot_id sp|P31133|POTF_ECOLI;
sprot_target db:uniprot_sprot|sp|P31133|POTF_ECOLI 2 340 evalue:2.9e-36 qcov:99.10 identity:27.30;
36060 36122 signal_peptide
ID metaerg.pl|03193
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
37929 37123 CDS
ID metaerg.pl|03194
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K11074;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479876.1 1 268 evalue:1.6e-128 qcov:100.00 identity:91.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.9e-12 score:46.5 best_domain_score:46.5 name:BPD_transp_1;
sprot_desc Putrescine transport system permease protein PotI;
sprot_id sp|P0AFL2|POTI_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AFL2|POTI_ECOL6 8 264 evalue:2.4e-38 qcov:95.90 identity:37.50;
tm_num 6;
37929 37123 transmembrane_helix
ID metaerg.pl|03195
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i37159-37227o37330-37398i37432-37500o37528-37596i37678-37746o37843-37911i;
38812 37922 CDS
ID metaerg.pl|03196
allgo_ids GO:0016020; GO:0055085; GO:0043190; GO:0005887; GO:0005886; GO:0015595; GO:0015847; GO:1903711;
allko_ids K02054; K11071;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479875.1 1 296 evalue:5.0e-155 qcov:100.00 identity:93.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:6.1e-08 score:31.8 best_domain_score:30.0 name:BPD_transp_1;
sprot_desc Spermidine/putrescine transport system permease protein PotB;
sprot_id sp|P0AFK4|POTB_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AFK4|POTB_ECOLI 18 285 evalue:1.1e-44 qcov:90.50 identity:37.30;
tm_num 6;
38812 37922 transmembrane_helix
ID metaerg.pl|03197
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i37958-38026o38162-38230i38249-38317o38408-38476i38579-38647o38705-38773i;
39905 38817 CDS
ID metaerg.pl|03198
allec_ids 7.6.2.11; 3.6.3.31;
allgo_ids GO:0005524; GO:0043190; GO:0016887; GO:0015594; GO:0015595;
allko_ids K10230; K02000; K10195; K01990; K10243; K11080; K10000; K02023; K02018; K02013; K10235; K06857; K05816; K11076; K02049; K01995; K02065; K10112; K01998; K10111; K10562; K02062; K11072; K02045; K02068; K10239; K06861; K02071; K01996; K10441; K10199; K11084; K02032; K02017; K02056; K02010; K05847; K01997; K02003; K02004; K02006; K02052;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479874.1 4 362 evalue:1.5e-166 qcov:99.20 identity:84.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00004; PF13304; PF00005; PF08402;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; TOBE domain;
pfam_id AAA; AAA_21; ABC_tran; TOBE_2;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:4.6e-05 score:23.1 best_domain_score:18.9 name:AAA; db:Pfam-A.hmm|PF13304.6 evalue:2.4e-10 score:40.0 best_domain_score:22.4 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:4.2e-32 score:110.8 best_domain_score:110.2 name:ABC_tran; db:Pfam-A.hmm|PF08402.10 evalue:2.1e-12 score:46.3 best_domain_score:45.1 name:TOBE_2;
sprot_desc Spermidine/putrescine import ATP-binding protein PotA;
sprot_id sp|Q1GIE5|POTA_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GIE5|POTA_RUEST 6 362 evalue:3.0e-116 qcov:98.60 identity:61.50;
tigrfam_acc TIGR01187;
tigrfam_desc polyamine ABC transporter, ATP-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name potA;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01187 evalue:6.3e-110 score:366.4 best_domain_score:366.3 name:TIGR01187;
41553 39931 CDS
ID metaerg.pl|03199
allec_ids 3.5.-.-;
allgo_ids GO:0016787; GO:0016021; GO:0048471; GO:0016810; GO:0009704; GO:0010218; GO:0009845;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481921.1 1 540 evalue:8.6e-246 qcov:100.00 identity:77.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:2e-12 score:46.3 best_domain_score:41.3 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:1.9e-95 score:320.3 best_domain_score:320.1 name:Amidohydro_3;
sprot_desc hypothetical protein;
sprot_id sp|A0A1I9LN01|LAF3_ARATH;
sprot_target db:uniprot_sprot|sp|A0A1I9LN01|LAF3_ARATH 2 507 evalue:2.3e-48 qcov:93.70 identity:30.20;
41889 42638 CDS
ID metaerg.pl|03200
allgo_ids GO:0003700; GO:0006355;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Allorhizobium;s__Allorhizobium oryziradicis;
genomedb_acc GCF_001939045.1;
genomedb_target db:genomedb|GCF_001939045.1|WP_075639474.1 16 232 evalue:3.1e-41 qcov:87.10 identity:47.90;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:3.4e-20 score:72.0 best_domain_score:71.1 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:4.2e-14 score:51.2 best_domain_score:50.0 name:GntR;
42628 43641 CDS
ID metaerg.pl|03201
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0015031;
allko_ids K13896; K02032; K02034; K05847; K02010; K02006; K02052; K12371; K02045; K01996; K06861; K02071; K02049; K01995; K10111; K02031; K02000; K02023;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068295047.1 1 330 evalue:1.1e-131 qcov:97.90 identity:75.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6135; PWY-6171; PWY-6188; PWY-6166;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF00005; PF08352;
pfam_desc ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:6.1e-27 score:94.0 best_domain_score:93.6 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:1.1e-18 score:66.7 best_domain_score:65.7 name:oligo_HPY;
sprot_desc Putative peptide import ATP-binding protein BRA0405/BS1330_II0402;
sprot_id sp|Q8FWP1|Y3405_BRUSU;
sprot_target db:uniprot_sprot|sp|Q8FWP1|Y3405_BRUSU 1 325 evalue:1.0e-81 qcov:96.40 identity:50.80;
tigrfam_acc TIGR01727;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name oligo_HPY;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:2.7e-25 score:87.4 best_domain_score:86.7 name:TIGR01727;
43638 44714 CDS
ID metaerg.pl|03202
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0030420; GO:0015031; GO:0030435;
allko_ids K02000; K12372; K02023; K05816; K01995; K02049; K02031; K10111; K01998; K02045; K11072; K02068; K06861; K02071; K01996; K13896; K02032; K02017; K01997; K02010; K05847; K02006; K02052;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068295048.1 1 355 evalue:7.9e-139 qcov:99.20 identity:71.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00005; PF08352;
pfam_desc ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.2e-35 score:122.3 best_domain_score:121.9 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:5.4e-18 score:64.5 best_domain_score:63.6 name:oligo_HPY;
sprot_desc Oligopeptide transport ATP-binding protein AppF;
sprot_id sp|P42065|APPF_BACSU;
sprot_target db:uniprot_sprot|sp|P42065|APPF_BACSU 3 317 evalue:2.5e-91 qcov:88.00 identity:52.50;
tigrfam_acc TIGR01727;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name oligo_HPY;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:1.2e-26 score:91.8 best_domain_score:91.1 name:TIGR01727;
44732 46246 CDS
ID metaerg.pl|03203
allko_ids K02035;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sp001724535;
genomedb_acc GCA_001724535.1;
genomedb_target db:genomedb|GCA_001724535.1|ODT58257.1 1 504 evalue:5.2e-237 qcov:100.00 identity:80.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:7.1e-78 score:261.4 best_domain_score:261.2 name:SBP_bac_5;
sp YES;
44732 44797 signal_peptide
ID metaerg.pl|03204
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
46316 47263 CDS
ID metaerg.pl|03205
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015031;
allko_ids K13890; K13894; K02033; K12369;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ketogulonicigenium;s__Ketogulonicigenium vulgare;
genomedb_acc GCF_000223375.1;
genomedb_target db:genomedb|GCF_000223375.1|YP_005795682.1 1 315 evalue:6.1e-143 qcov:100.00 identity:85.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:3.1e-39 score:133.9 best_domain_score:133.9 name:BPD_transp_1;
sprot_desc Dipeptide transport system permease protein DppB;
sprot_id sp|P0AEG0|DPPB_ECO57;
sprot_target db:uniprot_sprot|sp|P0AEG0|DPPB_ECO57 1 312 evalue:3.2e-66 qcov:99.00 identity:43.80;
tm_num 6;
46316 47263 transmembrane_helix
ID metaerg.pl|03206
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i46334-46393o46613-46681i46718-46786o46844-46903i47015-47083o47168-47236i;
47260 48144 CDS
ID metaerg.pl|03207
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015031;
allko_ids K02031; K02033; K02034;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068295055.1 13 293 evalue:1.6e-124 qcov:95.60 identity:82.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00528; PF12911;
pfam_desc Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C;
pfam_id BPD_transp_1; OppC_N;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.2e-29 score:102.6 best_domain_score:102.6 name:BPD_transp_1; db:Pfam-A.hmm|PF12911.7 evalue:1.6e-10 score:40.0 best_domain_score:40.0 name:OppC_N;
sprot_desc Dipeptide transport system permease protein DppC;
sprot_id sp|P94312|DPPC_BACPE;
sprot_target db:uniprot_sprot|sp|P94312|DPPC_BACPE 13 292 evalue:2.4e-63 qcov:95.20 identity:46.10;
tm_num 6;
47260 48144 transmembrane_helix
ID metaerg.pl|03208
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i47356-47424o47560-47628i47662-47715o47725-47784i47875-47943o48037-48105i;
48144 49892 CDS
ID metaerg.pl|03209
allec_ids 3.4.19.13;
allgo_ids GO:0042597; GO:0036374; GO:0102953; GO:0103068; GO:0006750; GO:0006751;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ketogulonicigenium;s__Ketogulonicigenium vulgare;
genomedb_acc GCF_000223375.1;
genomedb_target db:genomedb|GCF_000223375.1|YP_005795680.1 4 578 evalue:3.7e-247 qcov:98.80 identity:74.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF01019;
pfam_desc Gamma-glutamyltranspeptidase;
pfam_id G_glu_transpept;
pfam_target db:Pfam-A.hmm|PF01019.21 evalue:1.6e-119 score:399.2 best_domain_score:399.0 name:G_glu_transpept;
sprot_desc Glutathione hydrolase proenzyme;
sprot_id sp|P36267|GGT_PSEUA;
sprot_target db:uniprot_sprot|sp|P36267|GGT_PSEUA 5 511 evalue:1.2e-50 qcov:87.10 identity:30.20;
51683 49911 CDS
ID metaerg.pl|03210
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386204.1 1 559 evalue:1.0e-215 qcov:94.70 identity:73.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:2.9e-27 score:94.9 best_domain_score:93.3 name:Proton_antipo_M;
tm_num 15;
51683 49911 transmembrane_helix
ID metaerg.pl|03211
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o49920-49976i49989-50057o50115-50183i50202-50261o50271-50330i50367-50426o50484-50552i50586-50654o50682-50735i50754-50822o50835-50903i50937-51005o51063-51131i51192-51260o51288-51356i;
53178 51688 CDS
ID metaerg.pl|03212
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
allko_ids K05568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482439.1 1 496 evalue:1.1e-244 qcov:100.00 identity:91.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00361; PF00662;
pfam_desc Proton-conducting membrane transporter; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus;
pfam_id Proton_antipo_M; Proton_antipo_N;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:1.8e-54 score:184.1 best_domain_score:183.1 name:Proton_antipo_M; db:Pfam-A.hmm|PF00662.20 evalue:1.8e-07 score:30.3 best_domain_score:28.7 name:Proton_antipo_N;
sp YES;
sprot_desc NADH-quinone oxidoreductase subunit N;
sprot_id sp|B1I6I5|NUON_DESAP;
sprot_target db:uniprot_sprot|sp|B1I6I5|NUON_DESAP 7 473 evalue:3.6e-48 qcov:94.20 identity:35.90;
tm_num 12;
51688 51759 signal_peptide
ID metaerg.pl|03213
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
53178 51688 transmembrane_helix
ID metaerg.pl|03214
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o51697-51765i51799-51867o51925-51993i52030-52098o52177-52245i52318-52386o52414-52482i52519-52587o52630-52698i52813-52881o52924-52986i53047-53115o;
54632 53175 CDS
ID metaerg.pl|03215
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
allko_ids K05568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482440.1 1 484 evalue:7.0e-223 qcov:99.80 identity:84.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:3.1e-46 score:157.1 best_domain_score:156.1 name:Proton_antipo_M;
sprot_desc NADH-quinone oxidoreductase subunit N;
sprot_id sp|B1I6I5|NUON_DESAP;
sprot_target db:uniprot_sprot|sp|B1I6I5|NUON_DESAP 9 433 evalue:1.2e-48 qcov:87.60 identity:33.50;
tm_num 14;
54632 53175 transmembrane_helix
ID metaerg.pl|03216
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o53217-53285i53304-53372o53400-53468i53505-53558o53568-53636i53673-53732o53790-53858i53877-53945o53973-54041i54060-54125o54153-54221i54282-54350o54393-54461i54537-54605o;
54912 54622 CDS
ID metaerg.pl|03217
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469518.1 1 95 evalue:3.3e-39 qcov:99.00 identity:90.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00420;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
pfam_id Oxidored_q2;
pfam_target db:Pfam-A.hmm|PF00420.24 evalue:2e-11 score:42.7 best_domain_score:42.6 name:Oxidored_q2;
tm_num 3;
54912 54622 transmembrane_helix
ID metaerg.pl|03218
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o54634-54696i54715-54774o54802-54870i;
55867 54902 CDS
ID metaerg.pl|03219
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469517.1 1 321 evalue:8.6e-145 qcov:100.00 identity:88.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF13244; PF04039;
pfam_desc Domain of unknown function (DUF4040); Domain related to MnhB subunit of Na+/H+ antiporter;
pfam_id DUF4040; MnhB;
pfam_target db:Pfam-A.hmm|PF13244.6 evalue:4.6e-18 score:64.4 best_domain_score:64.4 name:DUF4040; db:Pfam-A.hmm|PF04039.13 evalue:9.2e-10 score:38.1 best_domain_score:38.1 name:MnhB;
tm_num 9;
55867 54902 transmembrane_helix
ID metaerg.pl|03220
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o54914-54973i54986-55054o55067-55135i55196-55264o55370-55438i55475-55543o55553-55621i55658-55726o55754-55822i;
56150 55860 CDS
ID metaerg.pl|03221
allgo_ids GO:0005451; GO:0015672; GO:1902600;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482443.1 1 96 evalue:8.6e-32 qcov:100.00 identity:77.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF03334;
pfam_desc Na+/H+ antiporter subunit;
pfam_id PhaG_MnhG_YufB;
pfam_target db:Pfam-A.hmm|PF03334.14 evalue:8.7e-23 score:79.6 best_domain_score:79.4 name:PhaG_MnhG_YufB;
tm_num 3;
56150 55860 transmembrane_helix
ID metaerg.pl|03222
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o55872-55940i55977-56030o56043-56111i;
56410 56150 CDS
ID metaerg.pl|03223
allgo_ids GO:0015075; GO:0016021; GO:0034220;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482444.1 1 86 evalue:1.2e-24 qcov:100.00 identity:84.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF04066;
pfam_desc Multiple resistance and pH regulation protein F (MrpF / PhaF);
pfam_id MrpF_PhaF;
pfam_target db:Pfam-A.hmm|PF04066.13 evalue:1.2e-08 score:34.4 best_domain_score:34.4 name:MrpF_PhaF;
tm_num 3;
56410 56150 transmembrane_helix
ID metaerg.pl|03224
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o56159-56227i56246-56314o56324-56392i;
57045 56407 CDS
ID metaerg.pl|03225
allgo_ids GO:0006812; GO:0008324; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386203.1 1 209 evalue:3.2e-63 qcov:98.60 identity:65.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF01899;
pfam_desc Na+/H+ ion antiporter subunit;
pfam_id MNHE;
pfam_target db:Pfam-A.hmm|PF01899.16 evalue:1.9e-22 score:78.8 best_domain_score:78.5 name:MNHE;
tm_num 2;
57045 56407 transmembrane_helix
ID metaerg.pl|03226
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i56557-56610o56620-56688i;
57329 57655 CDS
ID metaerg.pl|03227
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482445.1 1 108 evalue:1.2e-34 qcov:100.00 identity:74.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
58859 57861 CDS
ID metaerg.pl|03228
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386202.1 1 332 evalue:2.6e-168 qcov:100.00 identity:90.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF10095;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2333);
pfam_id DUF2333;
pfam_target db:Pfam-A.hmm|PF10095.9 evalue:2.8e-21 score:75.1 best_domain_score:48.5 name:DUF2333;
tm_num 1;
58859 57861 transmembrane_helix
ID metaerg.pl|03229
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i57966-58025o;
59050 59562 CDS
ID metaerg.pl|03230
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0003677; GO:0016987;
allko_ids K03088;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084635186.1 1 170 evalue:5.9e-76 qcov:100.00 identity:86.50;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF04542; PF04545; PF08281;
pfam_desc Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF04542.14 evalue:6.7e-15 score:53.9 best_domain_score:53.2 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:1.1e-07 score:30.5 best_domain_score:29.7 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:2e-13 score:49.0 best_domain_score:48.3 name:Sigma70_r4_2;
sprot_desc ECF RNA polymerase sigma factor EcfG;
sprot_id sp|B3Q6P8|ECFG_RHOPT;
sprot_target db:uniprot_sprot|sp|B3Q6P8|ECFG_RHOPT 2 153 evalue:2.9e-21 qcov:89.40 identity:39.00;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:1.1e-19 score:69.8 best_domain_score:69.5 name:TIGR02937;
59562 60365 CDS
ID metaerg.pl|03231
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469511.1 1 266 evalue:2.9e-109 qcov:99.60 identity:76.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
tm_num 1;
59562 60365 transmembrane_helix
ID metaerg.pl|03232
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i59835-59903o;
61163 60390 CDS
ID metaerg.pl|03233
allko_ids K09861;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795027.1 1 256 evalue:1.1e-105 qcov:99.60 identity:75.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF03883;
pfam_desc Peroxide stress protein YaaA;
pfam_id H2O2_YaaD;
pfam_target db:Pfam-A.hmm|PF03883.14 evalue:3.1e-81 score:271.6 best_domain_score:271.4 name:H2O2_YaaD;
sprot_desc hypothetical protein;
sprot_id sp|Q16D64|Y358_ROSDO;
sprot_target db:uniprot_sprot|sp|Q16D64|Y358_ROSDO 1 255 evalue:1.1e-85 qcov:99.20 identity:61.30;
61298 61585 CDS
ID metaerg.pl|03234
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795028.1 1 95 evalue:4.2e-31 qcov:100.00 identity:83.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF02325;
pfam_desc YGGT family;
pfam_id YGGT;
pfam_target db:Pfam-A.hmm|PF02325.17 evalue:4.1e-13 score:48.8 best_domain_score:48.4 name:YGGT;
tm_num 2;
61298 61585 transmembrane_helix
ID metaerg.pl|03235
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i61316-61384o61493-61561i;
61674 63635 CDS
ID metaerg.pl|03236
allec_ids 3.6.4.12;
allgo_ids GO:0003676; GO:0005524; GO:0043590; GO:0005737; GO:0030894; GO:0017117; GO:0043140; GO:0004003; GO:0016887; GO:0003677; GO:0008094; GO:0017116; GO:0046914; GO:0008270; GO:0006974; GO:0006310; GO:0006281; GO:0006260; GO:0009432;
allko_ids K01509; K05592; K05591; K03654;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795029.1 1 653 evalue:0.0e+00 qcov:100.00 identity:89.60;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00270; PF00271; PF00570; PF16124; PF09382;
pfam_desc DEAD/DEAH box helicase; Helicase conserved C-terminal domain; HRDC domain; RecQ zinc-binding; RQC domain;
pfam_id DEAD; Helicase_C; HRDC; RecQ_Zn_bind; RQC;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:6.5e-15 score:54.6 best_domain_score:53.9 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:4.6e-16 score:58.4 best_domain_score:57.3 name:Helicase_C; db:Pfam-A.hmm|PF00570.23 evalue:1.3e-30 score:104.5 best_domain_score:71.7 name:HRDC; db:Pfam-A.hmm|PF16124.5 evalue:9.4e-14 score:51.1 best_domain_score:50.0 name:RecQ_Zn_bind; db:Pfam-A.hmm|PF09382.10 evalue:3.7e-32 score:109.7 best_domain_score:107.3 name:RQC;
sprot_desc ATP-dependent DNA helicase RecQ;
sprot_id sp|P15043|RECQ_ECOLI;
sprot_target db:uniprot_sprot|sp|P15043|RECQ_ECOLI 1 562 evalue:1.7e-138 qcov:86.10 identity:45.70;
tigrfam_acc TIGR00614; TIGR01389;
tigrfam_desc ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ;
tigrfam_mainrole DNA metabolism; DNA metabolism;
tigrfam_name recQ_fam; recQ;
tigrfam_sub1role DNA replication, recombination, and repair; DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00614 evalue:3.2e-131 score:437.5 best_domain_score:437.2 name:TIGR00614; db:TIGRFAMs.hmm|TIGR01389 evalue:6.6e-206 score:684.4 best_domain_score:666.0 name:TIGR01389;
63741 64277 CDS
ID metaerg.pl|03237
allgo_ids GO:0005576;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795030.1 1 174 evalue:6.0e-79 qcov:97.80 identity:77.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF03061; PF13279;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily;
pfam_id 4HBT; 4HBT_2;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:0.00012 score:21.7 best_domain_score:20.8 name:4HBT; db:Pfam-A.hmm|PF13279.6 evalue:3.2e-13 score:49.5 best_domain_score:48.8 name:4HBT_2;
sprot_desc hypothetical protein;
sprot_id sp|A6H707|THEM6_BOVIN;
sprot_target db:uniprot_sprot|sp|A6H707|THEM6_BOVIN 18 165 evalue:2.3e-13 qcov:83.10 identity:36.20;
64415 65401 CDS
ID metaerg.pl|03238
allec_ids 1.11.1.5;
allgo_ids GO:0016491; GO:0055114; GO:0042597; GO:0004130; GO:0009055; GO:0020037; GO:0046872;
allko_ids K00428;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795121.1 1 328 evalue:4.5e-173 qcov:100.00 identity:90.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF03150; PF00034;
pfam_desc Di-haem cytochrome c peroxidase; Cytochrome c;
pfam_id CCP_MauG; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF03150.14 evalue:2.7e-50 score:170.1 best_domain_score:157.3 name:CCP_MauG; db:Pfam-A.hmm|PF00034.21 evalue:8.7e-08 score:32.4 best_domain_score:25.2 name:Cytochrom_C;
sp YES;
sprot_desc Cytochrome c551 peroxidase;
sprot_id sp|P14532|CCPR_PSEAE;
sprot_target db:uniprot_sprot|sp|P14532|CCPR_PSEAE 1 328 evalue:4.7e-68 qcov:100.00 identity:42.10;
64415 64489 signal_peptide
ID metaerg.pl|03239
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
65614 66036 CDS
ID metaerg.pl|03240
allgo_ids GO:0009055; GO:0020037; GO:0046872;
allko_ids K08738;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468681.1 1 139 evalue:4.1e-59 qcov:99.30 identity:83.60;
kegg_pathway_id 04115; 05012; 04210; 05014;
kegg_pathway_name p53 signaling pathway; Parkinson's disease; Apoptosis; Amyotrophic lateral sclerosis (ALS);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00034;
pfam_desc Cytochrome c;
pfam_id Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF00034.21 evalue:1.4e-05 score:25.3 best_domain_score:23.8 name:Cytochrom_C;
sp YES;
sprot_desc Cytochrome c-551;
sprot_id sp|P07625|CY551_ROSDO;
sprot_target db:uniprot_sprot|sp|P07625|CY551_ROSDO 5 137 evalue:3.3e-23 qcov:95.00 identity:47.10;
65614 65676 signal_peptide
ID metaerg.pl|03241
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
66186 66845 CDS
ID metaerg.pl|03242
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Mangrovicoccus;s__Mangrovicoccus sp003172915;
genomedb_acc GCF_003172915.1;
genomedb_target db:genomedb|GCF_003172915.1|WP_109810470.1 3 219 evalue:3.2e-26 qcov:99.10 identity:38.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
sp YES;
66186 66245 signal_peptide
ID metaerg.pl|03243
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
68161 66887 CDS
ID metaerg.pl|03244
allec_ids 6.3.2.12; 6.3.2.-;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0008841; GO:0046872; GO:0004326; GO:0046656; GO:0006730; GO:0046654;
allko_ids K11754;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795044.1 6 420 evalue:7.0e-195 qcov:97.90 identity:84.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-6455; PWY-6548; 1CMET2-PWY; ALL-CHORISMATE-PWY; FOLSYN-PWY; PWY-3841;
metacyc_pathway_name vancomycin resistance II;; ; N10-formyl-tetrahydrofolate biosynthesis;; superpathway of chorismate metabolism;; superpathway of tetrahydrofolate biosynthesis and salvage;; folate transformations II;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Vancomycin-Resistnace;; ; Folate-Biosynthesis;; Super-Pathways;; Folate-Biosynthesis; Super-Pathways;; Folate-Transformations;;
pfam_acc PF08245;
pfam_desc Mur ligase middle domain;
pfam_id Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF08245.12 evalue:6.1e-09 score:35.4 best_domain_score:34.3 name:Mur_ligase_M;
sprot_desc Dihydrofolate synthase/folylpolyglutamate synthase;
sprot_id sp|P08192|FOLC_ECOLI;
sprot_target db:uniprot_sprot|sp|P08192|FOLC_ECOLI 10 419 evalue:1.5e-47 qcov:96.70 identity:35.60;
tigrfam_acc TIGR01499;
tigrfam_desc bifunctional protein FolC;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name folC;
tigrfam_sub1role Folic acid;
tigrfam_target db:TIGRFAMs.hmm|TIGR01499 evalue:3e-109 score:365.2 best_domain_score:365.0 name:TIGR01499;
69084 68158 CDS
ID metaerg.pl|03245
allec_ids 2.1.3.15; 6.4.1.2;
allgo_ids GO:0009317; GO:0003989; GO:0005524; GO:0016743; GO:0008270; GO:0006633; GO:2001295;
allko_ids K01963;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482346.1 1 295 evalue:4.8e-153 qcov:95.80 identity:90.20;
kegg_pathway_id 00620; 00640; 00061; 00253;
kegg_pathway_name Pyruvate metabolism; Propanoate metabolism; Fatty acid biosynthesis; Tetracycline biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id FASYN-INITIAL-PWY; PWY-6113; PWY-6285; PWY0-881; PWY-4381; PWY-5789; PWY0-1264; PWY-5156; PWY-5743;
metacyc_pathway_name superpathway of fatty acid biosynthesis initiation (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; superpathway of fatty acid biosynthesis I (E. coli);; fatty acid biosynthesis initiation I;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; biotin-carboxyl carrier protein assembly;; superpathway of fatty acid biosynthesis II (plant);; 3-hydroxypropanoate cycle;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Autotrophic-CO2-Fixation;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;;
pfam_acc PF01039; PF17848;
pfam_desc Carboxyl transferase domain; Acetyl-coA carboxylase zinc finger domain;
pfam_id Carboxyl_trans; zf-ACC;
pfam_target db:Pfam-A.hmm|PF01039.22 evalue:1.5e-13 score:49.5 best_domain_score:49.2 name:Carboxyl_trans; db:Pfam-A.hmm|PF17848.1 evalue:1.2e-08 score:34.1 best_domain_score:34.1 name:zf-ACC;
sprot_desc Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta;
sprot_id sp|A8LKN7|ACCD_DINSH;
sprot_target db:uniprot_sprot|sp|A8LKN7|ACCD_DINSH 1 295 evalue:4.3e-132 qcov:95.80 identity:78.60;
tigrfam_acc TIGR00515;
tigrfam_desc acetyl-CoA carboxylase, carboxyl transferase, beta subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accD;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00515 evalue:4.6e-105 score:350.2 best_domain_score:350.1 name:TIGR00515;
70034 69141 CDS
ID metaerg.pl|03246
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795042.1 1 297 evalue:5.7e-135 qcov:100.00 identity:79.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF02517;
pfam_desc CPBP intramembrane metalloprotease;
pfam_id CPBP;
pfam_target db:Pfam-A.hmm|PF02517.16 evalue:2.1e-15 score:56.1 best_domain_score:56.1 name:CPBP;
tm_num 8;
70034 69141 transmembrane_helix
ID metaerg.pl|03247
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i69210-69278o69336-69404i69471-69539o69567-69635i69672-69740o69753-69809i69828-69896o69954-70022i;
70177 71598 CDS
ID metaerg.pl|03248
allec_ids 2.7.8.-;
allgo_ids GO:0003824; GO:0016021; GO:0005886; GO:0008808; GO:0032049;
allko_ids K06131;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482347.1 1 473 evalue:7.6e-206 qcov:100.00 identity:77.10;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id TEICHOICACID-PWY; PHOSLIPSYN-PWY; PWY-6385; PWY-5668; PWY4FS-4; PHOSLIPSYN2-PWY;
metacyc_pathway_name poly(glycerol phosphate) wall teichoic acid biosynthesis;; superpathway of phospholipid biosynthesis I (bacteria);; peptidoglycan biosynthesis III (mycobacteria);; cardiolipin biosynthesis I;; phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);;
metacyc_pathway_type Teichoic-Acids-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;; PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;;
pfam_acc PF00614; PF13091; PF13396;
pfam_desc Phospholipase D Active site motif; PLD-like domain; Phospholipase_D-nuclease N-terminal;
pfam_id PLDc; PLDc_2; PLDc_N;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:1.6e-11 score:43.1 best_domain_score:21.2 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:1.5e-37 score:127.7 best_domain_score:77.6 name:PLDc_2; db:Pfam-A.hmm|PF13396.6 evalue:1.7e-06 score:27.1 best_domain_score:25.5 name:PLDc_N;
sprot_desc Cardiolipin synthase A;
sprot_id sp|A7FI50|CLSA_YERP3;
sprot_target db:uniprot_sprot|sp|A7FI50|CLSA_YERP3 11 473 evalue:2.9e-71 qcov:97.90 identity:36.60;
tigrfam_acc TIGR04265;
tigrfam_desc cardiolipin synthase;
tigrfam_name bac_cardiolipin;
tigrfam_target db:TIGRFAMs.hmm|TIGR04265 evalue:3.6e-102 score:341.9 best_domain_score:339.9 name:TIGR04265;
tm_num 2;
70177 71598 transmembrane_helix
ID metaerg.pl|03249
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o70186-70245i70264-70332o;
72629 71718 CDS
ID metaerg.pl|03250
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
sp YES;
71718 71792 signal_peptide
ID metaerg.pl|03251
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
72894 73670 CDS
ID metaerg.pl|03252
allec_ids 2.4.1.-;
allgo_ids GO:0016757;
allko_ids K12997; K00698; K13002; K12983;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thalassobacter;s__Thalassobacter stenotrophicus;
genomedb_acc GCF_001458315.1;
genomedb_target db:genomedb|GCF_001458315.1|WP_058123094.1 1 248 evalue:3.6e-101 qcov:96.10 identity:75.00;
kegg_pathway_id 00530;
kegg_pathway_name Aminosugars metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-5307; PWY-5399; PWY-5342; PWY-5405; PWY-5343; PWY-2881; PWY-6297; PWY-5338; PWY-5400; PWY-5793; PWY-5380; PWY-5397; PWY-6404; PWY-2901; PWY-5313; PWY-881; PWY-5268; PWY-83; PWY-5379; PWY-5784; ECASYN-PWY; PWY-5284; PWY-5272; PWY-5756; PWY-5160; PWY-5139; PWY-5161; PWY-5800; PWY-5666; PWY-6397; PWY-4421; PWY-5672; PWY-5797; PWY-2021; PWY-5398; PWY-5339; PWY-5926; PWY-5774; PWY-5286; PWY-5759;
metacyc_pathway_name gentiodelphin biosynthesis;; betacyanin biosynthesis;; ajugose biosynthesis I (galactinol-dependent);; superpathway of betalain biosynthesis;; ajugose biosynthesis II (galactinol-independent);; cytokinins 7-N-glucoside biosynthesis;; tuberonate glucoside biosynthesis;; galactosylcyclitol biosynthesis;; amaranthin biosynthesis;; maysin biosynthesis;; A series fagopyritols biosynthesis;; crocetin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; cytokinins 9-N-glucoside biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; trehalose biosynthesis II;; salvianin biosynthesis;; monolignol glucosides biosynthesis;; B series fagopyritols biosynthesis;; indole-3-acetate inactivation VIII;; enterobacterial common antigen biosynthesis;; shisonin biosynthesis;; abscisic acid degradation by glucosylation;; saponin biosynthesis II;; rose anthocyanin biosynthesis I (via cyanidin 5-O-β-D-glucoside);; pelargonidin conjugates biosynthesis;; 6'-deoxychalcone metabolism;; xylan biosynthesis;; α-solanine/α-chaconine biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; curcumin glucoside biosynthesis;; ginsenosides biosynthesis;; indole-3-acetate inactivation VI;; indole-3-acetate inactivation IV;; crocetin esters biosynthesis;; chalcone 2'-O-glucoside biosynthesis;; afrormosin conjugates interconversion;; saponin biosynthesis IV;; anthocyanidin sophoroside metabolism;; saponin biosynthesis III;;
metacyc_pathway_type ANTHOCYANIN-SYN;; BETALAIN-ALKALOIDS;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Inactivation;; Cyclitols-Biosynthesis;; BETALAIN-ALKALOIDS;; FLAVONE-SYN;; CYCLITOLS-DEG; SUGAR-DERIVS;; APOCAROTENOID-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; ANTHOCYANIN-SYN; Super-Pathways;; Trehalose-biosynthesis;; ANTHOCYANIN-SYN;; LIGNIN-SYN; Metabolic-Clusters;; CYCLITOLS-DEG; SUGAR-DERIVS;; Indole-3-Acetate-Inactivation;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; Abscisic-Acid-Degradation; Interconversion;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN;; ANTHOCYANIN-SYN;; CHALCONE-SYN;; SECONDARY-CELL-WALL;; ALKALOIDS-SYN;; Cell-Wall-Biosynthesis;; PHENYLPROPANOID-SYN; POLYKETIDE-SYN;; TRITERPENOID-SYN;; Indole-3-Acetate-Inactivation;; Indole-3-Acetate-Inactivation;; APOCAROTENOID-SYN;; CHALCONE-SYN;; ISOFLAVONOID-SYN; Interconversion;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN; Metabolic-Clusters;; TRITERPENOID-SYN;;
pfam_acc PF00535; PF10111; PF13641;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyltransferase like family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_2; Glyco_tranf_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:5.6e-22 score:77.6 best_domain_score:77.1 name:Glycos_transf_2; db:Pfam-A.hmm|PF10111.9 evalue:5.3e-13 score:48.3 best_domain_score:25.4 name:Glyco_tranf_2_2; db:Pfam-A.hmm|PF13641.6 evalue:3.7e-11 score:42.6 best_domain_score:40.3 name:Glyco_tranf_2_3;
sprot_desc PGL/p-HBAD biosynthesis glycosyltransferase Mb2981;
sprot_id sp|P0A5A0|GLTR1_MYCBO;
sprot_target db:uniprot_sprot|sp|P0A5A0|GLTR1_MYCBO 20 206 evalue:1.4e-19 qcov:72.50 identity:36.10;
75059 73677 CDS
ID metaerg.pl|03253
allec_ids 5.4.2.8;
allgo_ids GO:0005975; GO:0016868; GO:0000287; GO:0004615; GO:0009298; GO:0009243;
allko_ids K03431; K00966; K01840; K01835; K01842;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05532.1 1 435 evalue:9.0e-196 qcov:94.60 identity:77.50;
kegg_pathway_id 00521; 00500; 00530; 00052; 00010; 00051; 00030;
kegg_pathway_name Streptomycin biosynthesis; Starch and sucrose metabolism; Aminosugars metabolism; Galactose metabolism; Glycolysis / Gluconeogenesis; Fructose and mannose metabolism; Pentose phosphate pathway;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-5659; COLANSYN-PWY; PWY-882;
metacyc_pathway_name GDP-mannose biosynthesis;; colanic acid building blocks biosynthesis;; L-ascorbate biosynthesis I (L-galactose pathway);;
metacyc_pathway_type GDP-Sugar-Biosynthesis;; Carbohydrates-Biosynthesis; Super-Pathways;; Ascorbate-Biosynthesis;;
pfam_acc PF02878; PF02879; PF02880; PF00408;
pfam_desc Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain;
pfam_id PGM_PMM_I; PGM_PMM_II; PGM_PMM_III; PGM_PMM_IV;
pfam_target db:Pfam-A.hmm|PF02878.16 evalue:1.5e-31 score:108.2 best_domain_score:107.1 name:PGM_PMM_I; db:Pfam-A.hmm|PF02879.16 evalue:6.9e-21 score:74.1 best_domain_score:72.9 name:PGM_PMM_II; db:Pfam-A.hmm|PF02880.16 evalue:4.1e-22 score:77.8 best_domain_score:77.1 name:PGM_PMM_III; db:Pfam-A.hmm|PF00408.20 evalue:3.6e-09 score:35.9 best_domain_score:34.5 name:PGM_PMM_IV;
sprot_desc Phosphomannomutase;
sprot_id sp|Q01411|MANB_SALMO;
sprot_target db:uniprot_sprot|sp|Q01411|MANB_SALMO 3 451 evalue:4.7e-151 qcov:97.60 identity:59.90;
76549 75056 CDS
ID metaerg.pl|03254
allec_ids 5.3.1.8; 2.7.7.13; 5.3.1.8 2.7.7.13;
allgo_ids GO:0005976; GO:0016779; GO:0005525; GO:0004475; GO:0004476; GO:0009298; GO:0009103;
allko_ids K01840; K00971; K00966; K01809; K16011;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter_A;s__Gemmobacter_A nectariphilus;
genomedb_acc GCF_000429765.1;
genomedb_target db:genomedb|GCF_000429765.1|WP_035025579.1 16 497 evalue:1.8e-221 qcov:97.00 identity:80.90;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-882; MANNCAT-PWY; COLANSYN-PWY; PWY-5659;
metacyc_pathway_name L-ascorbate biosynthesis I (L-galactose pathway);; D-mannose degradation;; colanic acid building blocks biosynthesis;; GDP-mannose biosynthesis;;
metacyc_pathway_type Ascorbate-Biosynthesis;; Sugars-And-Polysaccharides-Degradation;; Carbohydrates-Biosynthesis; Super-Pathways;; GDP-Sugar-Biosynthesis;;
pfam_acc PF07883; PF01050; PF00483;
pfam_desc Cupin domain; Mannose-6-phosphate isomerase; Nucleotidyl transferase;
pfam_id Cupin_2; MannoseP_isomer; NTP_transferase;
pfam_target db:Pfam-A.hmm|PF07883.11 evalue:2.4e-13 score:48.8 best_domain_score:48.2 name:Cupin_2; db:Pfam-A.hmm|PF01050.18 evalue:1e-62 score:209.7 best_domain_score:209.3 name:MannoseP_isomer; db:Pfam-A.hmm|PF00483.23 evalue:1.7e-50 score:171.2 best_domain_score:170.5 name:NTP_transferase;
sprot_desc Xanthan biosynthesis protein XanB;
sprot_id sp|P0C7J3|XANB_XANCP;
sprot_target db:uniprot_sprot|sp|P0C7J3|XANB_XANCP 19 491 evalue:1.6e-123 qcov:95.20 identity:49.30;
tigrfam_acc TIGR01479;
tigrfam_desc mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;
tigrfam_mainrole Cell envelope;
tigrfam_name GMP_PMI;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01479 evalue:2.8e-170 score:566.3 best_domain_score:566.1 name:TIGR01479;
77498 76530 CDS
ID metaerg.pl|03255
allec_ids 1.1.1.271;
allgo_ids GO:0003824; GO:0050662; GO:0005737; GO:0050577; GO:0016853; GO:0070401; GO:0042351; GO:0009242;
allko_ids K01711; K02377;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Jhaorihella;s__Jhaorihella thermophila;
genomedb_acc GCF_900108275.1;
genomedb_target db:genomedb|GCF_900108275.1|WP_104009307.1 1 321 evalue:5.2e-150 qcov:99.70 identity:80.10;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-66; COLANSYN-PWY;
metacyc_pathway_name GDP-L-fucose biosynthesis I (from GDP-D-mannose);; colanic acid building blocks biosynthesis;;
metacyc_pathway_type GDP-Sugar-Biosynthesis;; Carbohydrates-Biosynthesis; Super-Pathways;;
pfam_acc PF01370; PF16363; PF04321;
pfam_desc NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; RmlD substrate binding domain;
pfam_id Epimerase; GDP_Man_Dehyd; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01370.21 evalue:5.4e-74 score:247.9 best_domain_score:247.7 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:4.6e-17 score:61.6 best_domain_score:60.3 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF04321.17 evalue:1.1e-08 score:33.8 best_domain_score:33.3 name:RmlD_sub_bind;
sprot_desc GDP-L-fucose synthase;
sprot_id sp|P32055|FCL_ECOLI;
sprot_target db:uniprot_sprot|sp|P32055|FCL_ECOLI 2 317 evalue:3.0e-112 qcov:98.10 identity:62.70;
78753 77632 CDS
ID metaerg.pl|03256
allec_ids 4.2.1.47;
allgo_ids GO:0003824; GO:0050662; GO:0008446; GO:0070401; GO:0042351; GO:0019673;
allko_ids K01711;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Marinovum;s__Marinovum algicola;
genomedb_acc GCF_900109145.1;
genomedb_target db:genomedb|GCF_900109145.1|WP_074840396.1 3 373 evalue:5.4e-183 qcov:99.50 identity:82.70;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-5738; GDPRHAMSYN-PWY; COLANSYN-PWY; PWY-5740; PWY-5739; PWY-66;
metacyc_pathway_name GDP-6-deoxy-D-talose biosynthesis;; GDP-D-rhamnose biosynthesis;; colanic acid building blocks biosynthesis;; GDP-L-colitose biosynthesis;; GDP-D-perosamine biosynthesis;; GDP-L-fucose biosynthesis I (from GDP-D-mannose);;
metacyc_pathway_type GDP-Sugar-Biosynthesis;; GDP-Sugar-Biosynthesis;; Carbohydrates-Biosynthesis; Super-Pathways;; GDP-Sugar-Biosynthesis;; GDP-Sugar-Biosynthesis;; GDP-Sugar-Biosynthesis;;
pfam_acc PF01370; PF16363; PF04321;
pfam_desc NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; RmlD substrate binding domain;
pfam_id Epimerase; GDP_Man_Dehyd; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01370.21 evalue:2.1e-75 score:252.6 best_domain_score:252.3 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:1.3e-154 score:513.8 best_domain_score:513.6 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF04321.17 evalue:5.7e-08 score:31.4 best_domain_score:30.7 name:RmlD_sub_bind;
sprot_desc GDP-mannose 4,6-dehydratase;
sprot_id sp|Q56598|GM4D_VIBCL;
sprot_target db:uniprot_sprot|sp|Q56598|GM4D_VIBCL 1 369 evalue:2.2e-175 qcov:98.90 identity:78.00;
tigrfam_acc TIGR01472;
tigrfam_desc GDP-mannose 4,6-dehydratase;
tigrfam_mainrole Cell envelope;
tigrfam_name gmd;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01472 evalue:1.7e-171 score:569.1 best_domain_score:569.0 name:TIGR01472;
79870 78941 CDS
ID metaerg.pl|03257
allec_ids 2.4.-.-;
allgo_ids GO:0016757; GO:0009244;
allko_ids K12984;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_A;s__Rhodobacter_A azotoformans;
genomedb_acc GCF_003050905.1;
genomedb_target db:genomedb|GCF_003050905.1|WP_108222456.1 9 303 evalue:6.6e-118 qcov:95.50 identity:68.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id LPSSYN-PWY; LIPA-CORESYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF00535; PF13704;
pfam_desc Glycosyl transferase family 2; Glycosyl transferase family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_4;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.7e-14 score:53.2 best_domain_score:52.8 name:Glycos_transf_2; db:Pfam-A.hmm|PF13704.6 evalue:1e-06 score:28.4 best_domain_score:27.2 name:Glyco_tranf_2_4;
sprot_desc Lipopolysaccharide core biosynthesis glycosyltransferase WaaE;
sprot_id sp|Q9XC90|WAAE_KLEPN;
sprot_target db:uniprot_sprot|sp|Q9XC90|WAAE_KLEPN 9 281 evalue:1.1e-15 qcov:88.30 identity:27.20;
80439 79867 CDS
ID metaerg.pl|03258
allec_ids 2.3.1.-;
allgo_ids GO:0016746; GO:0009103; GO:0045228;
allko_ids K00677; K02536; K03818;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger;s__Salipiger marinus;
genomedb_acc GCF_900100085.1;
genomedb_target db:genomedb|GCF_900100085.1|WP_089849400.1 8 190 evalue:2.4e-78 qcov:96.30 identity:75.40;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id BENZCOA-PWY; PWY-5184; PWY-4801; KDO-NAGLIPASYN-PWY; PWY1-3; PWY-6397; PWY-6442; PWY-6312; PWY-6418; PWY-5080; PWY-5139; PWY-6310; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5477; PWY-5981; PWY-5437; PWY-6413; FASYN-INITIAL-PWY; PWYG-321; PWY-6113; LPSSYN-PWY; PWY-6432; PWY1A0-6325; PWY-5209; PWY-5965; PWY-5400; PWY-5972; PWY-5405; PWY-5307; PWY-6318; PWY-6412; KDO-LIPASYN-PWY; PWY-5393; PWY-6438; THREOCAT-PWY; PWY-84; PWY-5284; ECASYN-PWY; PWY-6295; P3-PWY; PWY-6515; PWY-5313; CENTBENZCOA-PWY; PWY-6316; PWY-6404; PWY-6411; PWY-5987; PWY-5268; PWY0-881; PWY-5140;
metacyc_pathway_name anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; aloesone biosynthesis I;; superpathway of (Kdo)2-lipid A biosynthesis;; polyhydroxybutanoate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; barbaloin biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; very long chain fatty acid biosynthesis I;; pelargonidin conjugates biosynthesis;; aloesone biosynthesis II;; sophorolipid biosynthesis;; gallotannin biosynthesis;; CDP-diacylglycerol biosynthesis III;; L-threonine degradation I;; ginsenoside degradation III;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; curcuminoid biosynthesis;; actinorhodin biosynthesis;; methyl-coenzyme M oxidation to CO2;; fatty acid biosynthesis initiation III;; amaranthin biosynthesis;; stearate biosynthesis I (animals and fungi);; superpathway of betalain biosynthesis;; gentiodelphin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; raspberry ketone biosynthesis;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; resveratrol biosynthesis;; shisonin biosynthesis;; enterobacterial common antigen biosynthesis;; ; gallate degradation III (anaerobic);; phloridzin biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ginsenoside degradation I;; sorgoleone biosynthesis;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; cannabinoid biosynthesis;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; POLYKETIDE-SYN;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Storage-Compounds-Biosynthesis;; Cell-Wall-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; POLYKETIDE-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; Fatty-acid-biosynthesis;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Lipid-Biosynthesis;; GALLOTANNINS;; CDP-diacylglycerol-Biosynthesis;; THREONINE-DEG;; TERPENOID-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; METHANOGENESIS;; Fatty-acid-biosynthesis;; BETALAIN-ALKALOIDS;; Stearate-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; ANTHOCYANIN-SYN;; PHENYLALANINE-DEG;; Ginsenoside-Degradation;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; ANTHOCYANIN-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ; GALLATE-DEG;; FLAVONOID-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Ginsenoside-Degradation;; QUINONE-SYN;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;;
sprot_desc Putative colanic acid biosynthesis acetyltransferase WcaF;
sprot_id sp|P0ACD2|WCAF_ECOLI;
sprot_target db:uniprot_sprot|sp|P0ACD2|WCAF_ECOLI 30 186 evalue:2.2e-25 qcov:82.60 identity:36.30;
81815 80436 CDS
ID metaerg.pl|03259
allko_ids K00441; K00226;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger;s__Salipiger marinus;
genomedb_acc GCF_900100085.1;
genomedb_target db:genomedb|GCF_900100085.1|WP_131821838.1 4 459 evalue:1.1e-193 qcov:99.30 identity:73.50;
kegg_pathway_id 00240; 00790;
kegg_pathway_name Pyrimidine metabolism; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF04432; PF04422;
pfam_desc Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term;
pfam_id FrhB_FdhB_C; FrhB_FdhB_N;
pfam_target db:Pfam-A.hmm|PF04432.13 evalue:1.2e-29 score:102.3 best_domain_score:101.8 name:FrhB_FdhB_C; db:Pfam-A.hmm|PF04422.13 evalue:1.4e-14 score:53.3 best_domain_score:52.3 name:FrhB_FdhB_N;
tm_num 1;
81815 80436 transmembrane_helix
ID metaerg.pl|03260
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i80454-80522o;
83044 81812 CDS
ID metaerg.pl|03261
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Celeribacter_A;s__Celeribacter_A marinus;
genomedb_acc GCF_001308265.1;
genomedb_target db:genomedb|GCF_001308265.1|WP_082388973.1 8 403 evalue:1.1e-128 qcov:96.60 identity:59.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF04230;
pfam_desc Polysaccharide pyruvyl transferase;
pfam_id PS_pyruv_trans;
pfam_target db:Pfam-A.hmm|PF04230.13 evalue:8.3e-29 score:100.6 best_domain_score:99.6 name:PS_pyruv_trans;
83522 82989 CDS
ID metaerg.pl|03262
allko_ids K00677; K02536;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Celeribacter_A;s__Celeribacter_A marinus;
genomedb_acc GCF_001308265.1;
genomedb_target db:genomedb|GCF_001308265.1|WP_062214552.1 4 174 evalue:4.9e-65 qcov:96.60 identity:73.70;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00132; PF14602;
pfam_desc Bacterial transferase hexapeptide (six repeats); Hexapeptide repeat of succinyl-transferase;
pfam_id Hexapep; Hexapep_2;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:5.7e-13 score:47.3 best_domain_score:29.5 name:Hexapep; db:Pfam-A.hmm|PF14602.6 evalue:4.5e-10 score:38.4 best_domain_score:32.1 name:Hexapep_2;
tm_num 1;
83522 82989 transmembrane_helix
ID metaerg.pl|03263
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i83118-83186o;
84646 83519 CDS
ID metaerg.pl|03264
allko_ids K00712; K03429;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger;s__Salipiger marinus;
genomedb_acc GCF_900100085.1;
genomedb_target db:genomedb|GCF_900100085.1|WP_089849391.1 7 373 evalue:1.3e-120 qcov:97.90 identity:62.80;
kegg_pathway_id 00561;
kegg_pathway_name Glycerolipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00534; PF13439; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:2.6e-17 score:62.1 best_domain_score:61.3 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:1.8e-07 score:30.5 best_domain_score:30.5 name:Glyco_transf_4; db:Pfam-A.hmm|PF13692.6 evalue:2.7e-14 score:53.0 best_domain_score:51.4 name:Glyco_trans_1_4;
tm_num 1;
84646 83519 transmembrane_helix
ID metaerg.pl|03265
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i83768-83836o;
85878 84643 CDS
ID metaerg.pl|03266
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__PALSA-1209;s__PALSA-1209 sp003132025;
genomedb_acc GCA_003132025.1;
genomedb_target db:genomedb|GCA_003132025.1|PKWJ01000018.1_185 15 355 evalue:6.5e-20 qcov:83.00 identity:29.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
tm_num 10;
85878 84643 transmembrane_helix
ID metaerg.pl|03267
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i84661-84726o84769-84828i84847-84900o84931-84999i85018-85077o85120-85188i85225-85293o85321-85374i85540-85608o85690-85758i;
87482 86103 CDS
ID metaerg.pl|03268
allec_ids 2.1.1.107; 1.3.1.76; 4.99.1.4;
allgo_ids GO:0006779; GO:0055114; GO:0051287; GO:0043115; GO:0051266; GO:0004851; GO:0009236; GO:0019354;
allko_ids K02302;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796705.1 1 447 evalue:7.1e-193 qcov:97.40 identity:79.40;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id P381-PWY; PWY-5194; PWY-5196;
metacyc_pathway_name adenosylcobalamin biosynthesis II (aerobic);; siroheme biosynthesis;; factor 430 biosynthesis;;
metacyc_pathway_type De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;; Porphyrin-Compounds-Biosynthesis;; Cofactor-Biosynthesis;;
pfam_acc PF10414; PF13241; PF00590;
pfam_desc Sirohaem synthase dimerisation region; Putative NAD(P)-binding; Tetrapyrrole (Corrin/Porphyrin) Methylases;
pfam_id CysG_dimeriser; NAD_binding_7; TP_methylase;
pfam_target db:Pfam-A.hmm|PF10414.9 evalue:2.1e-14 score:52.2 best_domain_score:52.2 name:CysG_dimeriser; db:Pfam-A.hmm|PF13241.6 evalue:2.5e-19 score:68.9 best_domain_score:67.2 name:NAD_binding_7; db:Pfam-A.hmm|PF00590.20 evalue:5.6e-44 score:149.9 best_domain_score:149.9 name:TP_methylase;
sprot_desc Siroheme synthase;
sprot_id sp|Q02NA3|CYSG_PSEAB;
sprot_target db:uniprot_sprot|sp|Q02NA3|CYSG_PSEAB 1 443 evalue:3.2e-83 qcov:96.50 identity:42.00;
tigrfam_acc TIGR01469; TIGR01470;
tigrfam_desc uroporphyrinogen-III C-methyltransferase; siroheme synthase, N-terminal domain;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cobA_cysG_Cterm; cysG_Nterm;
tigrfam_sub1role Heme, porphyrin, and cobalamin; Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01469 evalue:6.3e-71 score:238.0 best_domain_score:237.3 name:TIGR01469; db:TIGRFAMs.hmm|TIGR01470 evalue:8.9e-56 score:187.9 best_domain_score:187.0 name:TIGR01470;
88405 87479 CDS
ID metaerg.pl|03269
allec_ids 2.4.2.18;
allgo_ids GO:0016757; GO:0004048; GO:0000287; GO:0000162;
allko_ids K00766; K13497;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796706.1 1 295 evalue:8.6e-126 qcov:95.80 identity:78.50;
kegg_pathway_id 02020; 00400;
kegg_pathway_name Two-component system - General; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; TRPSYN-PWY;
metacyc_pathway_name superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; L-tryptophan biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; TRYPTOPHAN-BIOSYNTHESIS;;
pfam_acc PF00591; PF02885;
pfam_desc Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain;
pfam_id Glycos_transf_3; Glycos_trans_3N;
pfam_target db:Pfam-A.hmm|PF00591.21 evalue:0.00012 score:21.0 best_domain_score:19.6 name:Glycos_transf_3; db:Pfam-A.hmm|PF02885.17 evalue:1.2e-15 score:56.4 best_domain_score:55.4 name:Glycos_trans_3N;
sprot_desc Anthranilate phosphoribosyltransferase;
sprot_id sp|A1B3Y5|TRPD_PARDP;
sprot_target db:uniprot_sprot|sp|A1B3Y5|TRPD_PARDP 13 295 evalue:5.3e-13 qcov:91.90 identity:28.30;
90999 88402 CDS
ID metaerg.pl|03270
allec_ids 1.7.-.-;
allgo_ids GO:0016491; GO:0055114; GO:0051539; GO:0046872; GO:0043546; GO:0019333; GO:0042128;
allko_ids K00376; K00360; K00372; K13483; K00336; K02567; K08348; K00817; K03388; K00436; K00203; K02030; K00369; K04564; K02048; K02027; K02035; K00202; K00123; K08345; K00370; K00362; K00201; K05299; K15905; K04014; K00380; K05813; K00122; K03934; K00367; K07305;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796707.1 1 865 evalue:0.0e+00 qcov:100.00 identity:85.00;
kegg_pathway_id 00920; 00400; 00401; 02010; 02020; 00910; 00630; 05012; 00350; 00130; 00360; 00190; 00340; 00790; 00680;
kegg_pathway_name Sulfur metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Novobiocin biosynthesis; ABC transporters - General; Two-component system - General; Nitrogen metabolism; Glyoxylate and dicarboxylate metabolism; Parkinson's disease; Tyrosine metabolism; Ubiquinone biosynthesis; Phenylalanine metabolism; Oxidative phosphorylation; Histidine metabolism; Folate biosynthesis; Methane metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF04324; PF00384; PF04879; PF01568;
pfam_desc BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain; Molydopterin dinucleotide binding domain;
pfam_id Fer2_BFD; Molybdopterin; Molybdop_Fe4S4; Molydop_binding;
pfam_target db:Pfam-A.hmm|PF04324.15 evalue:3.7e-13 score:48.8 best_domain_score:48.2 name:Fer2_BFD; db:Pfam-A.hmm|PF00384.22 evalue:3e-75 score:253.0 best_domain_score:252.7 name:Molybdopterin; db:Pfam-A.hmm|PF04879.16 evalue:9.4e-17 score:60.0 best_domain_score:59.0 name:Molybdop_Fe4S4; db:Pfam-A.hmm|PF01568.21 evalue:6.7e-29 score:99.4 best_domain_score:98.2 name:Molydop_binding;
sprot_desc Nitrate reductase;
sprot_id sp|Q06457|NASA_KLEOX;
sprot_target db:uniprot_sprot|sp|Q06457|NASA_KLEOX 4 864 evalue:4.5e-219 qcov:99.50 identity:49.20;
91328 90996 CDS
ID metaerg.pl|03271
allec_ids 1.7.1.4;
allgo_ids GO:0016491; GO:0051537; GO:0055114; GO:0005737; GO:0046872; GO:0008942; GO:0042128;
allko_ids K05710; K00363; K00362;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius sp002428225;
genomedb_acc GCA_002428225.1;
genomedb_target db:genomedb|GCA_002428225.1|DIUD01000052.1_4 1 110 evalue:1.9e-51 qcov:100.00 identity:90.90;
kegg_pathway_id 00910; 00360;
kegg_pathway_name Nitrogen metabolism; Phenylalanine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metabolic_acc TIGR02378;
metabolic_process compound:Nitrogen;process:Nitrite reduction;gene:NirD;;
metabolic_target db:metabolic.hmm|TIGR02378 evalue:2.3e-27 score:94.4 best_domain_score:94.2 name:TIGR02378;
metacyc_pathway_id PWY-723; PWY-5675;
metacyc_pathway_name alkylnitronates degradation;; nitrate reduction V (assimilatory);;
metacyc_pathway_type Other-Degradation;; Nitrate-Reduction;;
pfam_acc PF00355; PF13806;
pfam_desc Rieske [2Fe-2S] domain; Rieske-like [2Fe-2S] domain;
pfam_id Rieske; Rieske_2;
pfam_target db:Pfam-A.hmm|PF00355.26 evalue:6.8e-15 score:54.0 best_domain_score:53.8 name:Rieske; db:Pfam-A.hmm|PF13806.6 evalue:9.6e-18 score:63.3 best_domain_score:63.1 name:Rieske_2;
sprot_desc Assimilatory nitrite reductase [NAD(P)H] small subunit;
sprot_id sp|P42436|NASE_BACSU;
sprot_target db:uniprot_sprot|sp|P42436|NASE_BACSU 6 99 evalue:6.9e-16 qcov:85.50 identity:39.40;
tigrfam_acc TIGR02378;
tigrfam_desc nitrite reductase [NAD(P)H], small subunit;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name nirD_assim_sml;
tigrfam_sub1role Nitrogen metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR02378 evalue:2.3e-27 score:94.4 best_domain_score:94.2 name:TIGR02378;
93766 91325 CDS
ID metaerg.pl|03272
allec_ids 1.7.1.4;
allgo_ids GO:0016491; GO:0020037; GO:0051536; GO:0055114; GO:0051539; GO:0050660; GO:0046872; GO:0050661; GO:0008942; GO:0042128;
allko_ids K00360; K00441; K00372; K00176; K00369; K11181; K00392; K00529; K01008; K00382; K00362; K00363; K00381; K03885; K11180; K00366; K00356;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796867.1 1 813 evalue:0.0e+00 qcov:100.00 identity:89.80;
kegg_pathway_id 00720; 00010; 00280; 00920; 00020; 00260; 00620; 00252; 00633; 00910; 00450; 00071; 00360; 00190; 00790;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation; Sulfur metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Pyruvate metabolism; Alanine and aspartate metabolism; Trinitrotoluene degradation; Nitrogen metabolism; Selenoamino acid metabolism; Fatty acid metabolism; Phenylalanine metabolism; Oxidative phosphorylation; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metabolic_acc TIGR02374;
metabolic_process compound:Nitrogen;process:Nitrite reduction;gene:NirB;;
metacyc_pathway_id PWY-5675; PWY-723;
metacyc_pathway_name nitrate reduction V (assimilatory);; alkylnitronates degradation;;
metacyc_pathway_type Nitrate-Reduction;; Other-Degradation;;
pfam_acc PF04324; PF01077; PF03460; PF00070; PF07992; PF13738; PF18267;
pfam_desc BFD-like [2Fe-2S] binding domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Rubredoxin NAD+ reductase C-terminal domain;
pfam_id Fer2_BFD; NIR_SIR; NIR_SIR_ferr; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Rubredoxin_C;
pfam_target db:Pfam-A.hmm|PF04324.15 evalue:8.2e-26 score:89.4 best_domain_score:46.6 name:Fer2_BFD; db:Pfam-A.hmm|PF01077.22 evalue:2.8e-25 score:87.9 best_domain_score:87.0 name:NIR_SIR; db:Pfam-A.hmm|PF03460.17 evalue:1.1e-13 score:50.1 best_domain_score:49.1 name:NIR_SIR_ferr; db:Pfam-A.hmm|PF00070.27 evalue:2.6e-16 score:59.2 best_domain_score:58.0 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:2.5e-50 score:170.6 best_domain_score:169.8 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:6.8e-08 score:31.3 best_domain_score:30.8 name:Pyr_redox_3; db:Pfam-A.hmm|PF18267.1 evalue:1e-17 score:63.0 best_domain_score:61.1 name:Rubredoxin_C;
sp YES;
sprot_desc Nitrite reductase [NAD(P)H];
sprot_id sp|P42435|NASD_BACSU;
sprot_target db:uniprot_sprot|sp|P42435|NASD_BACSU 2 791 evalue:8.2e-215 qcov:97.20 identity:49.90;
tigrfam_acc TIGR02374;
tigrfam_desc nitrite reductase [NAD(P)H], large subunit;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name nitri_red_nirB;
tigrfam_sub1role Nitrogen metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR02374 evalue:2.5e-261 score:868.7 best_domain_score:868.4 name:TIGR02374;
91325 91393 signal_peptide
ID metaerg.pl|03273
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
94566 93772 CDS
ID metaerg.pl|03274
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0015112; GO:0042128;
allko_ids K11076; K05816; K10235; K01998; K10112; K10111; K02049; K02065; K01995; K02000; K02023; K10243; K01990; K02017; K02032; K11084; K02006; K02052; K05847; K02010; K02003; K01997; K11072; K02045; K02062; K01996; K02071; K06861;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796711.1 1 264 evalue:7.1e-137 qcov:100.00 identity:93.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:3.4e-33 score:114.3 best_domain_score:113.9 name:ABC_tran;
sprot_desc Nitrate transport protein NasD;
sprot_id sp|P39459|NASD_KLEOX;
sprot_target db:uniprot_sprot|sp|P39459|NASD_KLEOX 4 256 evalue:1.9e-91 qcov:95.80 identity:65.20;
tigrfam_acc TIGR01184;
tigrfam_desc nitrate ABC transporter, ATP-binding proteins C and D;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ntrCD;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01184 evalue:8.3e-104 score:345.3 best_domain_score:345.1 name:TIGR01184;
95457 94570 CDS
ID metaerg.pl|03275
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015112; GO:0042128;
allko_ids K02050; K15577;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796712.1 1 295 evalue:4.1e-141 qcov:100.00 identity:87.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:5.9e-24 score:84.0 best_domain_score:84.0 name:BPD_transp_1;
sprot_desc Nitrate import permease protein NrtB;
sprot_id sp|P73451|NRTB_SYNY3;
sprot_target db:uniprot_sprot|sp|P73451|NRTB_SYNY3 45 288 evalue:8.2e-80 qcov:82.70 identity:59.00;
tigrfam_acc TIGR01183;
tigrfam_desc nitrate ABC transporter, permease protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ntrB;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01183 evalue:2.1e-93 score:310.8 best_domain_score:310.8 name:TIGR01183;
tm_num 7;
95457 94570 transmembrane_helix
ID metaerg.pl|03276
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i94684-94752o94894-94962i94981-95049o95059-95127i95188-95247o95257-95325i95362-95430o;
96757 95471 CDS
ID metaerg.pl|03277
allgo_ids GO:0005886; GO:0006811; GO:0042128;
allko_ids K15576;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796713.1 4 428 evalue:5.2e-222 qcov:99.30 identity:87.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF13379;
pfam_desc NMT1-like family;
pfam_id NMT1_2;
pfam_target db:Pfam-A.hmm|PF13379.6 evalue:1.4e-93 score:312.5 best_domain_score:312.1 name:NMT1_2;
sp YES;
sprot_desc Nitrate/nitrite binding protein NrtA;
sprot_id sp|P73452|NRTA_SYNY3;
sprot_target db:uniprot_sprot|sp|P73452|NRTA_SYNY3 38 427 evalue:3.6e-129 qcov:91.10 identity:56.50;
95471 95569 signal_peptide
ID metaerg.pl|03278
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
98190 97024 CDS
ID metaerg.pl|03279
allec_ids 7.3.2.4;
allgo_ids GO:0005886; GO:0005524; GO:0016887; GO:0015414; GO:0042128;
allko_ids K15578;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796714.1 1 383 evalue:1.1e-165 qcov:98.70 identity:76.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF09084; PF13379;
pfam_desc NMT1/THI5 like; NMT1-like family;
pfam_id NMT1; NMT1_2;
pfam_target db:Pfam-A.hmm|PF09084.11 evalue:3.5e-07 score:29.6 best_domain_score:16.8 name:NMT1; db:Pfam-A.hmm|PF13379.6 evalue:2.2e-63 score:213.5 best_domain_score:213.0 name:NMT1_2;
sprot_desc Nitrate import ATP-binding protein NrtC;
sprot_id sp|P73450|NRTC_SYNY3;
sprot_target db:uniprot_sprot|sp|P73450|NRTC_SYNY3 6 347 evalue:2.3e-37 qcov:88.10 identity:30.80;
98762 98187 CDS
ID metaerg.pl|03280
allgo_ids GO:0003723; GO:0000160; GO:0031564;
allko_ids K07646; K22010;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796715.1 1 191 evalue:3.5e-85 qcov:100.00 identity:89.50;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF03861;
pfam_desc ANTAR domain;
pfam_id ANTAR;
pfam_target db:Pfam-A.hmm|PF03861.14 evalue:1.6e-21 score:75.1 best_domain_score:75.1 name:ANTAR;
sprot_desc Probable transcriptional regulatory protein pdtaR;
sprot_id sp|P9WGM2|PDTAR_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WGM2|PDTAR_MYCTO 6 188 evalue:3.9e-14 qcov:95.80 identity:27.70;
101023 99020 CDS
ID metaerg.pl|03281
allec_ids 6.1.1.23; 6.1.1.-;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004815; GO:0050560; GO:0003676; GO:0006422;
allko_ids K01876;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481798.1 1 667 evalue:0.0e+00 qcov:100.00 identity:83.10;
kegg_pathway_id 00252; 00970;
kegg_pathway_name Alanine and aspartate metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY490-4;
metacyc_pathway_name L-asparagine biosynthesis III (tRNA-dependent);;
metacyc_pathway_type ASPARAGINE-SYN; Aminoacyl-tRNAs-Charging;;
pfam_acc PF02938; PF00152; PF01336;
pfam_desc GAD domain; tRNA synthetases class II (D, K and N) ; OB-fold nucleic acid binding domain;
pfam_id GAD; tRNA-synt_2; tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF02938.14 evalue:2e-05 score:24.0 best_domain_score:11.9 name:GAD; db:Pfam-A.hmm|PF00152.20 evalue:5.5e-89 score:297.6 best_domain_score:297.3 name:tRNA-synt_2; db:Pfam-A.hmm|PF01336.25 evalue:4.2e-16 score:57.9 best_domain_score:56.4 name:tRNA_anti-codon;
sprot_desc Aspartate--tRNA(Asp/Asn) ligase;
sprot_id sp|A3PMK8|SYDND_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PMK8|SYDND_RHOS1 1 667 evalue:3.4e-291 qcov:100.00 identity:74.70;
tigrfam_acc TIGR00459;
tigrfam_desc aspartate--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name aspS_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00459 evalue:6.6e-169 score:562.1 best_domain_score:383.0 name:TIGR00459;
101385 101092 CDS
ID metaerg.pl|03282
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795020.1 1 97 evalue:3.5e-25 qcov:100.00 identity:69.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF12096;
pfam_desc Protein of unknown function (DUF3572);
pfam_id DUF3572;
pfam_target db:Pfam-A.hmm|PF12096.8 evalue:1.9e-17 score:62.4 best_domain_score:62.1 name:DUF3572;
101474 102973 CDS
ID metaerg.pl|03283
allec_ids 2.7.7.65;
allgo_ids GO:0000160; GO:0005737; GO:0052621; GO:0005525; GO:0042802; GO:0046872; GO:0007049; GO:0030154;
allko_ids K11711; K07642; K02484; K11356; K11640; K07645; K07677; K07708; K07704; K10909; K01937; K08282; K11231; K07654; K07682; K03407; K07637; K07641; K07646; K07639; K08475; K07673; K01120; K07652; K07778; K11354; K07768; K07711; K07679; K02478; K07648; K07651; K06379; K07676; K10681; K07709; K07644; K12767; K13761; K02486; K11383; K04757; K10125; K11357; K07647; K07675; K02668; K03388; K08479; K10916; K02489; K07716; K07710; K01768; K02482; K02480; K07653; K07636; K11527; K10715; K07678; K02488;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795019.1 1 458 evalue:3.3e-127 qcov:91.80 identity:55.70;
kegg_pathway_id 05111; 00790; 00230; 00240; 04011; 02020; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Folate biosynthesis; Purine metabolism; Pyrimidine metabolism; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00990; PF00072;
pfam_desc Diguanylate cyclase, GGDEF domain; Response regulator receiver domain;
pfam_id GGDEF; Response_reg;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:3.3e-44 score:149.7 best_domain_score:148.9 name:GGDEF; db:Pfam-A.hmm|PF00072.24 evalue:1.4e-25 score:88.8 best_domain_score:73.5 name:Response_reg;
sprot_desc Response regulator PleD;
sprot_id sp|Q9A5I5|PLED_CAUVC;
sprot_target db:uniprot_sprot|sp|Q9A5I5|PLED_CAUVC 1 456 evalue:1.4e-63 qcov:91.40 identity:36.20;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:4.1e-47 score:159.1 best_domain_score:158.3 name:TIGR00254;
103349 102852 CDS
ID metaerg.pl|03284
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795018.1 4 158 evalue:1.4e-34 qcov:93.90 identity:53.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF13801;
pfam_desc Heavy-metal resistance;
pfam_id Metal_resist;
pfam_target db:Pfam-A.hmm|PF13801.6 evalue:1.4e-11 score:43.9 best_domain_score:42.8 name:Metal_resist;
sp YES;
tm_num 1;
102852 102971 signal_peptide
ID metaerg.pl|03285
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
103349 102852 transmembrane_helix
ID metaerg.pl|03286
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i102885-102953o;
103736 103353 CDS
ID metaerg.pl|03287
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795017.1 8 126 evalue:5.8e-20 qcov:93.70 identity:49.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
tm_num 1;
103736 103353 transmembrane_helix
ID metaerg.pl|03288
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i103548-103616o;
104298 103720 CDS
ID metaerg.pl|03289
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0003677; GO:0016987;
allko_ids K03088;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795117.1 1 191 evalue:9.9e-72 qcov:99.50 identity:75.90;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF07638; PF04542; PF04545; PF08281;
pfam_desc ECF sigma factor; Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_ECF; Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF07638.11 evalue:2.4e-07 score:30.1 best_domain_score:26.1 name:Sigma70_ECF; db:Pfam-A.hmm|PF04542.14 evalue:7.7e-21 score:72.9 best_domain_score:72.0 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:4.4e-07 score:28.6 best_domain_score:27.9 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:1.3e-13 score:49.6 best_domain_score:48.6 name:Sigma70_r4_2;
sprot_desc ECF RNA polymerase sigma factor SigG;
sprot_id sp|P9WGG4|SIGG_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WGG4|SIGG_MYCTO 21 190 evalue:1.6e-07 qcov:88.50 identity:29.60;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:4.1e-29 score:100.5 best_domain_score:100.3 name:TIGR02937;
104808 104353 CDS
ID metaerg.pl|03290
allgo_ids GO:0005509;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657350.1 9 143 evalue:3.6e-32 qcov:89.40 identity:62.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00036; PF13202; PF13405; PF13499;
pfam_desc EF hand; EF hand; EF-hand domain; EF-hand domain pair;
pfam_id EF-hand_1; EF-hand_5; EF-hand_6; EF-hand_7;
pfam_target db:Pfam-A.hmm|PF00036.32 evalue:2.6e-08 score:32.1 best_domain_score:16.3 name:EF-hand_1; db:Pfam-A.hmm|PF13202.6 evalue:1.5e-09 score:36.1 best_domain_score:23.3 name:EF-hand_5; db:Pfam-A.hmm|PF13405.6 evalue:2.7e-07 score:29.3 best_domain_score:13.0 name:EF-hand_6; db:Pfam-A.hmm|PF13499.6 evalue:1.7e-08 score:34.0 best_domain_score:28.6 name:EF-hand_7;
sp YES;
104353 104415 signal_peptide
ID metaerg.pl|03291
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
104991 105395 CDS
ID metaerg.pl|03292
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795015.1 10 131 evalue:1.7e-54 qcov:91.00 identity:85.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF06170;
pfam_desc Protein of unknown function (DUF983);
pfam_id DUF983;
pfam_target db:Pfam-A.hmm|PF06170.12 evalue:2.9e-25 score:87.7 best_domain_score:87.7 name:DUF983;
tm_num 1;
104991 105395 transmembrane_helix
ID metaerg.pl|03293
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o105246-105314i;
105379 106053 CDS
ID metaerg.pl|03294
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795014.1 1 224 evalue:3.5e-100 qcov:100.00 identity:82.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:1.8e-10 score:40.2 best_domain_score:32.4 name:NUDIX;
106173 106538 CDS
ID metaerg.pl|03295
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0003677; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_100319057.1 1 120 evalue:4.8e-56 qcov:99.20 identity:93.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF01475; PF05732;
pfam_desc Ferric uptake regulator family; Firmicute plasmid replication protein (RepL);
pfam_id FUR; RepL;
pfam_target db:Pfam-A.hmm|PF01475.19 evalue:1.3e-36 score:124.6 best_domain_score:124.5 name:FUR; db:Pfam-A.hmm|PF05732.11 evalue:3.3e-05 score:22.6 best_domain_score:15.2 name:RepL;
sprot_desc Ferric uptake regulation protein;
sprot_id sp|O07315|FUR_RHILV;
sprot_target db:uniprot_sprot|sp|O07315|FUR_RHILV 1 120 evalue:8.6e-36 qcov:99.20 identity:62.50;
107576 106563 CDS
ID metaerg.pl|03296
allec_ids 7.6.2.9;
allgo_ids GO:0005524; GO:0016887; GO:0016020; GO:0102908; GO:0006865; GO:0031460;
allko_ids K01996; K02071; K06861; K02062; K11072; K02068; K02045; K02028; K05847; K02010; K02003; K01997; K02052; K02006; K11084; K02017; K02032; K10243; K01990; K10000; K02023; K02000; K02049; K02065; K01995; K10112; K01998; K10111; K02031; K05816; K11076;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Maritimibacter;s__Maritimibacter sp001626765;
genomedb_acc GCA_001626765.1;
genomedb_target db:genomedb|GCA_001626765.1|LUOO01000076.1_2 1 337 evalue:2.9e-127 qcov:100.00 identity:70.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF09818; PF00005;
pfam_desc Predicted ATPase of the ABC class; ABC transporter;
pfam_id ABC_ATPase; ABC_tran;
pfam_target db:Pfam-A.hmm|PF09818.9 evalue:0.00011 score:20.4 best_domain_score:11.1 name:ABC_ATPase; db:Pfam-A.hmm|PF00005.27 evalue:1.9e-30 score:105.4 best_domain_score:102.3 name:ABC_tran;
sprot_desc Glycine betaine transport ATP-binding protein OpuAA;
sprot_id sp|P46920|OPUAA_BACSU;
sprot_target db:uniprot_sprot|sp|P46920|OPUAA_BACSU 6 334 evalue:6.0e-79 qcov:97.60 identity:47.10;
tigrfam_acc TIGR01186;
tigrfam_desc glycine betaine/L-proline transport ATP binding subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name proV;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01186 evalue:5.8e-99 score:330.8 best_domain_score:330.5 name:TIGR01186;
108460 107573 CDS
ID metaerg.pl|03297
allgo_ids GO:0016020; GO:0055085; GO:0043190; GO:0005887; GO:0005886; GO:0005275; GO:0006865; GO:0031460; GO:0006972;
allko_ids K02001; K02050;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Maritimibacter;s__Maritimibacter sp003520545;
genomedb_acc GCA_003520545.1;
genomedb_target db:genomedb|GCA_003520545.1|HBZ42509.1 1 290 evalue:5.3e-125 qcov:98.30 identity:81.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.1e-27 score:96.2 best_domain_score:96.2 name:BPD_transp_1;
sprot_desc Glycine betaine/proline betaine transport system permease protein ProW;
sprot_id sp|P14176|PROW_ECOLI;
sprot_target db:uniprot_sprot|sp|P14176|PROW_ECOLI 43 284 evalue:4.1e-55 qcov:82.00 identity:51.20;
tm_num 6;
108460 107573 transmembrane_helix
ID metaerg.pl|03298
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology i107732-107791o107804-107863i107882-107950o107993-108061i108230-108298o108341-108397i;
109556 108546 CDS
ID metaerg.pl|03299
allgo_ids GO:0022857; GO:0043190; GO:0055085;
allko_ids K02002;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Maritimibacter;s__Maritimibacter sp001626765;
genomedb_acc GCA_001626765.1;
genomedb_target db:genomedb|GCA_001626765.1|LUOO01000072.1_2 1 336 evalue:7.9e-149 qcov:100.00 identity:73.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF04069;
pfam_desc Substrate binding domain of ABC-type glycine betaine transport system;
pfam_id OpuAC;
pfam_target db:Pfam-A.hmm|PF04069.12 evalue:7.6e-51 score:172.4 best_domain_score:172.1 name:OpuAC;
sp YES;
108546 108617 signal_peptide
ID metaerg.pl|03300
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
110533 109811 CDS
ID metaerg.pl|03301
allgo_ids GO:0000160; GO:0003677; GO:0006355;
allko_ids K07637; K03407; K07682; K07654; K07652; K07673; K01120; K08475; K07639; K07646; K07641; K08884; K07711; K07768; K02575; K11354; K07778; K07718; K07651; K07648; K02478; K07679; K07642; K11711; K11640; K11356; K00760; K02484; K08282; K01937; K07704; K10909; K07677; K07645; K07708; K13490; K02491; K11231; K10916; K08479; K03388; K02668; K01768; K07710; K07716; K02489; K07636; K07638; K07653; K02480; K02482; K07678; K10715; K11527; K10681; K07676; K06379; K01769; K07644; K07709; K11357; K10125; K04757; K11383; K13761; K02486; K12767; K07717; K07675; K07647; K07659;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794955.1 3 240 evalue:1.2e-103 qcov:99.20 identity:81.90;
kegg_pathway_id 00790; 03090; 02020; 04011; 00240; 05111; 00230; 00983;
kegg_pathway_name Folate biosynthesis; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Drug metabolism - other enzymes;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:1.1e-27 score:95.6 best_domain_score:95.1 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:1.4e-22 score:78.8 best_domain_score:77.7 name:Trans_reg_C;
sprot_desc hypothetical protein;
sprot_id sp|P31079|PETR_RHOCB;
sprot_target db:uniprot_sprot|sp|P31079|PETR_RHOCB 6 240 evalue:2.1e-86 qcov:97.90 identity:68.50;
111039 110530 CDS
ID metaerg.pl|03302
allgo_ids GO:0003700; GO:0006355; GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794954.1 1 169 evalue:2.2e-75 qcov:100.00 identity:88.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF13463; PF01047; PF12802;
pfam_desc Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id HTH_27; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF13463.6 evalue:1.6e-06 score:27.7 best_domain_score:26.9 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:6.5e-07 score:28.4 best_domain_score:27.7 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:1.1e-11 score:43.7 best_domain_score:42.9 name:MarR_2;
sprot_desc HTH-type transcriptional regulator PetP;
sprot_id sp|P31078|PETP_RHOCB;
sprot_target db:uniprot_sprot|sp|P31078|PETP_RHOCB 8 166 evalue:5.5e-65 qcov:94.10 identity:79.20;
111204 112073 CDS
ID metaerg.pl|03303
allec_ids 2.6.1.42;
allgo_ids GO:0003824; GO:0052656; GO:0052654; GO:0052655; GO:0009097; GO:0009098; GO:0009099;
allko_ids K00826;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794953.1 1 289 evalue:2.1e-158 qcov:100.00 identity:93.80;
kegg_pathway_id 00280; 00290; 00770;
kegg_pathway_name Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
metacyc_pathway_id PWY-5078; VALSYN-PWY; PWY-5076; PWY0-1061; LEUSYN-PWY; PWY-5057; BRANCHED-CHAIN-AA-SYN-PWY; LEU-DEG2-PWY; VALDEG-PWY; PWY-5101; PWY-5108; PWY-3001; ALANINE-VALINESYN-PWY; THREOCAT-PWY; PWY-5103; PWY-5104; ILEUDEG-PWY; ILEUSYN-PWY;
metacyc_pathway_name L-isoleucine degradation II;; L-valine biosynthesis;; L-leucine degradation III;; superpathway of L-alanine biosynthesis;; L-leucine biosynthesis;; L-valine degradation II;; superpathway of branched chain amino acid biosynthesis;; L-leucine degradation I;; L-valine degradation I;; L-isoleucine biosynthesis II;; L-isoleucine biosynthesis V;; superpathway of L-isoleucine biosynthesis I;; L-alanine biosynthesis I;; superpathway of L-threonine metabolism;; L-isoleucine biosynthesis III;; L-isoleucine biosynthesis IV;; L-isoleucine degradation I;; L-isoleucine biosynthesis I (from threonine);;
metacyc_pathway_type ISOLEUCINE-DEG;; VALINE-BIOSYNTHESIS;; LEUCINE-DEG;; ALANINE-SYN; Super-Pathways;; LEUCINE-SYN;; VALINE-DEG;; Amino-Acid-Biosynthesis; Super-Pathways;; LEUCINE-DEG;; VALINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; ALANINE-SYN;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-DEG;; ISOLEUCINE-SYN;;
pfam_acc PF01063;
pfam_desc Amino-transferase class IV;
pfam_id Aminotran_4;
pfam_target db:Pfam-A.hmm|PF01063.19 evalue:2.1e-43 score:148.0 best_domain_score:147.8 name:Aminotran_4;
sprot_desc Probable branched-chain-amino-acid aminotransferase;
sprot_id sp|Q4ULR3|ILVE_RICFE;
sprot_target db:uniprot_sprot|sp|Q4ULR3|ILVE_RICFE 12 288 evalue:4.3e-57 qcov:95.80 identity:39.50;
tigrfam_acc TIGR01122;
tigrfam_desc branched-chain amino acid aminotransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ilvE_I;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01122 evalue:1e-84 score:283.4 best_domain_score:283.2 name:TIGR01122;
112128 112745 CDS
ID metaerg.pl|03304
allgo_ids GO:0005515;
allko_ids K00799; K04097;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795108.1 4 205 evalue:9.3e-84 qcov:98.50 identity:74.30;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF13410; PF02798; PF13409; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C_2; GST_N; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF13410.6 evalue:1e-06 score:27.9 best_domain_score:27.1 name:GST_C_2; db:Pfam-A.hmm|PF02798.20 evalue:1.4e-08 score:34.2 best_domain_score:33.6 name:GST_N; db:Pfam-A.hmm|PF13409.6 evalue:1.6e-10 score:40.4 best_domain_score:39.5 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:1.7e-15 score:56.4 best_domain_score:55.7 name:GST_N_3;
115264 112721 CDS
ID metaerg.pl|03305
allgo_ids GO:0006812; GO:0015299; GO:0016021; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468017.1 1 834 evalue:0.0e+00 qcov:98.50 identity:86.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF00027; PF00999;
pfam_desc Cyclic nucleotide-binding domain; Sodium/hydrogen exchanger family;
pfam_id cNMP_binding; Na_H_Exchanger;
pfam_target db:Pfam-A.hmm|PF00027.29 evalue:3.9e-16 score:58.1 best_domain_score:57.3 name:cNMP_binding; db:Pfam-A.hmm|PF00999.21 evalue:9.2e-48 score:162.2 best_domain_score:161.7 name:Na_H_Exchanger;
tm_num 12;
115264 112721 transmembrane_helix
ID metaerg.pl|03306
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
topology o112730-112789i112808-112876o112940-112999i113018-113086o113099-113167i113225-113293o113321-113389i113450-113518o113591-113659i113678-113746o113810-113878i113897-113965o;
116216 115353 CDS
ID metaerg.pl|03307
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795107.1 1 287 evalue:2.2e-123 qcov:100.00 identity:79.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.644841; 203.324; 0.0138472; 0.647197; 204.63;
pfam_acc PF05013;
pfam_desc N-formylglutamate amidohydrolase;
pfam_id FGase;
pfam_target db:Pfam-A.hmm|PF05013.12 evalue:6.4e-64 score:215.3 best_domain_score:215.1 name:FGase;
>Feature NODE_17_length_116352_cov_46.5074
3 743 CDS
ID metaerg.pl|03308
allgo_ids GO:0043190; GO:0030288; GO:1904680;
allko_ids K02035;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093936.1 1 246 evalue:1.7e-132 qcov:100.00 identity:94.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:5.3e-22 score:77.5 best_domain_score:77.1 name:SBP_bac_5;
sprot_desc Probable ABC transporter-binding protein DR_1571;
sprot_id sp|Q9RU24|UF71_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RU24|UF71_DEIRA 2 211 evalue:6.1e-20 qcov:85.40 identity:32.60;
803 1591 CDS
ID metaerg.pl|03309
allec_ids 2.5.1.143;
allgo_ids GO:0006189; GO:0016021; GO:0005886; GO:0016787; GO:0016740;
allko_ids K06898;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091456.1 1 262 evalue:7.6e-131 qcov:100.00 identity:94.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00731;
pfam_desc AIR carboxylase;
pfam_id AIRC;
pfam_target db:Pfam-A.hmm|PF00731.20 evalue:3.6e-16 score:58.3 best_domain_score:58.1 name:AIRC;
sprot_desc Pyridinium-3,5-biscarboxylic acid mononucleotide synthase;
sprot_id sp|F9UST0|LARB_LACPL;
sprot_target db:uniprot_sprot|sp|F9UST0|LARB_LACPL 10 248 evalue:3.1e-54 qcov:91.20 identity:51.00;
1706 1912 CDS
ID metaerg.pl|03310
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091455.1 1 68 evalue:3.7e-29 qcov:100.00 identity:92.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
tm_num 1;
1706 1912 transmembrane_helix
ID metaerg.pl|03311
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i1820-1888o;
1999 3408 CDS
ID metaerg.pl|03312
allec_ids 4.3.2.1;
allgo_ids GO:0005737; GO:0004056; GO:0042450;
allko_ids K01755; K01679; K01744; K01756; K01857;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091454.1 1 461 evalue:5.1e-255 qcov:98.30 identity:96.70;
kegg_pathway_id 00230; 00020; 00720; 00362; 00910; 00220; 00252; 00330;
kegg_pathway_name Purine metabolism; Citrate cycle (TCA cycle); Reductive carboxylate cycle (CO2 fixation); Benzoate degradation via hydroxylation; Nitrogen metabolism; Urea cycle and metabolism of amino groups; Alanine and aspartate metabolism; Arginine and proline metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id ARGSYN-PWY; PWY-4983; PWY-5154; ARG+POLYAMINE-SYN; PWY-5; ARGSYNBSUB-PWY; ARGININE-SYN4-PWY; PWY-5004; PWY-4984;
metacyc_pathway_name L-arginine biosynthesis I (via L-ornithine);; nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; superpathway of arginine and polyamine biosynthesis;; canavanine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis II;; superpathway of L-citrulline metabolism;; urea cycle;;
metacyc_pathway_type ARGININE-SYN; Super-Pathways;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; Citrulline-Biosynthesis; Super-Pathways;; NITROGEN-DEG;;
pfam_acc PF14698; PF00206;
pfam_desc Argininosuccinate lyase C-terminal; Lyase;
pfam_id ASL_C2; Lyase_1;
pfam_target db:Pfam-A.hmm|PF14698.6 evalue:9.8e-25 score:86.4 best_domain_score:83.5 name:ASL_C2; db:Pfam-A.hmm|PF00206.20 evalue:2.5e-74 score:249.7 best_domain_score:249.1 name:Lyase_1;
sprot_desc Argininosuccinate lyase;
sprot_id sp|Q9LAE5|ARLY_NOSP7;
sprot_target db:uniprot_sprot|sp|Q9LAE5|ARLY_NOSP7 1 460 evalue:4.4e-245 qcov:98.10 identity:92.00;
tigrfam_acc TIGR00838;
tigrfam_desc argininosuccinate lyase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argH;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00838 evalue:1.5e-203 score:676.1 best_domain_score:675.9 name:TIGR00838;
4262 4753 CDS
ID metaerg.pl|03313
allgo_ids GO:0016787;
allko_ids K01515; K00952; K08310; K03574; K01529; K13522;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091452.1 1 163 evalue:2.1e-83 qcov:100.00 identity:93.30;
kegg_pathway_id 00760; 00230; 00790;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Purine metabolism; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:7.7e-19 score:67.3 best_domain_score:67.0 name:NUDIX;
4790 5602 CDS
ID metaerg.pl|03314
allko_ids K01259;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091451.1 1 270 evalue:1.2e-139 qcov:100.00 identity:92.20;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00561; PF12697; PF12146; PF03096;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33; Ndr family;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4; Ndr;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:6.5e-24 score:84.2 best_domain_score:68.1 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:1.3e-21 score:77.5 best_domain_score:77.2 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:1.9e-16 score:59.3 best_domain_score:55.7 name:Hydrolase_4; db:Pfam-A.hmm|PF03096.14 evalue:2.1e-08 score:32.5 best_domain_score:32.2 name:Ndr;
6416 5589 CDS
ID metaerg.pl|03315
allec_ids 2.7.1.33;
allgo_ids GO:0004594; GO:0005737; GO:0005524; GO:0046872; GO:0015937;
allko_ids K03525;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091450.1 1 271 evalue:2.6e-129 qcov:98.50 identity:83.40;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id COA-PWY; PWY-4221; PANTOSYN-PWY; PWY-4242;
metacyc_pathway_name coenzyme A biosynthesis I (prokaryotic);; superpathway of coenzyme A biosynthesis II (plants);; superpathway of coenzyme A biosynthesis I (bacteria);; ;
metacyc_pathway_type CoA-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; ;
pfam_acc PF03309;
pfam_desc Type III pantothenate kinase;
pfam_id Pan_kinase;
pfam_target db:Pfam-A.hmm|PF03309.14 evalue:9.2e-37 score:126.1 best_domain_score:125.6 name:Pan_kinase;
sprot_desc Type III pantothenate kinase;
sprot_id sp|Q8YQD7|COAX_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YQD7|COAX_NOSS1 9 272 evalue:2.1e-93 qcov:96.00 identity:63.60;
tigrfam_acc TIGR00671;
tigrfam_desc pantothenate kinase, type III;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name baf;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00671 evalue:1.7e-38 score:131.9 best_domain_score:130.6 name:TIGR00671;
6527 8251 CDS
ID metaerg.pl|03316
allec_ids 1.-.-.-;
allgo_ids GO:0010181; GO:0046872; GO:0016491;
allko_ids K00492;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091449.1 1 574 evalue:0.0e+00 qcov:100.00 identity:97.60;
kegg_pathway_id 00361; 00120; 00150; 00624; 00626; 00622; 00680; 00350; 00360; 00340; 00903;
kegg_pathway_name gamma-Hexachlorocyclohexane degradation; Bile acid biosynthesis; Androgen and estrogen metabolism; 1- and 2-Methylnaphthalene degradation; Naphthalene and anthracene degradation; Toluene and xylene degradation; Methane metabolism; Tyrosine metabolism; Phenylalanine metabolism; Histidine metabolism; Limonene and pinene degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-5987; PWY-5479; PWY-5469; PWY-5826; PWY-2821; PWY-5271; PWY-4302;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sesamin biosynthesis;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; LIGNAN-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF01613; PF00753;
pfam_desc Flavin reductase like domain; Metallo-beta-lactamase superfamily;
pfam_id Flavin_Reduct; Lactamase_B;
pfam_target db:Pfam-A.hmm|PF01613.18 evalue:4e-20 score:71.7 best_domain_score:70.8 name:Flavin_Reduct; db:Pfam-A.hmm|PF00753.27 evalue:2e-07 score:30.5 best_domain_score:29.5 name:Lactamase_B;
sprot_desc Putative diflavin flavoprotein A 3;
sprot_id sp|Q8YQD8|DFA3_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YQD8|DFA3_NOSS1 1 574 evalue:1.6e-302 qcov:100.00 identity:88.00;
8382 8822 CDS
ID metaerg.pl|03317
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091448.1 7 146 evalue:6.0e-61 qcov:95.90 identity:87.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF04480;
pfam_desc Protein of unknown function (DUF559);
pfam_id DUF559;
pfam_target db:Pfam-A.hmm|PF04480.12 evalue:6e-37 score:125.1 best_domain_score:124.8 name:DUF559;
8893 10605 CDS
ID metaerg.pl|03318
allec_ids 1.-.-.-;
allgo_ids GO:0010181; GO:0009055;
allko_ids K00492;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091447.1 1 570 evalue:0.0e+00 qcov:100.00 identity:96.50;
kegg_pathway_id 00150; 00120; 00361; 00622; 00626; 00624; 00360; 00340; 00350; 00680; 00903;
kegg_pathway_name Androgen and estrogen metabolism; Bile acid biosynthesis; gamma-Hexachlorocyclohexane degradation; Toluene and xylene degradation; Naphthalene and anthracene degradation; 1- and 2-Methylnaphthalene degradation; Phenylalanine metabolism; Histidine metabolism; Tyrosine metabolism; Methane metabolism; Limonene and pinene degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id PWY-2821; PWY-5826; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5987; PWY-5479;
metacyc_pathway_name glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;;
metacyc_pathway_type GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;;
pfam_acc PF01613; PF00258;
pfam_desc Flavin reductase like domain; Flavodoxin;
pfam_id Flavin_Reduct; Flavodoxin_1;
pfam_target db:Pfam-A.hmm|PF01613.18 evalue:1e-21 score:76.8 best_domain_score:76.2 name:Flavin_Reduct; db:Pfam-A.hmm|PF00258.25 evalue:8.4e-09 score:35.0 best_domain_score:33.7 name:Flavodoxin_1;
sprot_desc Putative diflavin flavoprotein A 6;
sprot_id sp|Q8YQE2|DFA6_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YQE2|DFA6_NOSS1 1 570 evalue:5.3e-301 qcov:100.00 identity:87.00;
11173 12933 CDS
ID metaerg.pl|03319
allko_ids K00368;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Chlorogloeopsis;s__Chlorogloeopsis fritschii;
genomedb_acc GCF_000317285.1;
genomedb_target db:genomedb|GCF_000317285.1|WP_016875339.1 1 586 evalue:7.6e-264 qcov:100.00 identity:78.40;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
sp YES;
tm_num 1;
11173 11256 signal_peptide
ID metaerg.pl|03320
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
11173 12933 transmembrane_helix
ID metaerg.pl|03321
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i11197-11265o;
13708 13160 CDS
ID metaerg.pl|03322
allec_ids 4.-.-.-;
allgo_ids GO:0017009; GO:0016829;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006199089.1 1 179 evalue:1.0e-86 qcov:98.40 identity:90.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id PWY1A0-6325;
metacyc_pathway_name actinorhodin biosynthesis;;
metacyc_pathway_type Antibiotic-Biosynthesis;;
pfam_acc PF09367;
pfam_desc CpeS-like protein;
pfam_id CpeS;
pfam_target db:Pfam-A.hmm|PF09367.10 evalue:3.9e-42 score:143.3 best_domain_score:143.1 name:CpeS;
sprot_desc Putative phycocyanobilin lyase CpcS 2;
sprot_id sp|Q8YLK6|CPCS2_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YLK6|CPCS2_NOSS1 1 178 evalue:7.3e-79 qcov:97.80 identity:82.60;
14166 15611 CDS
ID metaerg.pl|03323
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091869.1 1 481 evalue:2.0e-214 qcov:100.00 identity:88.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF13437; PF16576;
pfam_desc HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF13437.6 evalue:4.8e-20 score:71.5 best_domain_score:68.3 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:1.4e-23 score:82.5 best_domain_score:75.1 name:HlyD_D23;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:6.1e-46 score:156.0 best_domain_score:122.0 name:TIGR01730;
15672 18914 CDS
ID metaerg.pl|03324
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886;
allko_ids K07789;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091868.1 1 1080 evalue:0.0e+00 qcov:100.00 identity:94.30;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00873; PF03176;
pfam_desc AcrB/AcrD/AcrF family; MMPL family;
pfam_id ACR_tran; MMPL;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:1.6e-299 score:995.3 best_domain_score:995.1 name:ACR_tran; db:Pfam-A.hmm|PF03176.15 evalue:2.4e-06 score:25.9 best_domain_score:25.9 name:MMPL;
sprot_desc Multidrug resistance protein MdtC;
sprot_id sp|Q7N3E1|MDTC_PHOLL;
sprot_target db:uniprot_sprot|sp|Q7N3E1|MDTC_PHOLL 17 1053 evalue:1.6e-85 qcov:96.00 identity:28.80;
tm_num 12;
15672 18914 transmembrane_helix
ID metaerg.pl|03325
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i15732-15800o16734-16802i16821-16889o16899-16964i17082-17150o17163-17231i17349-17417o18375-18428i18447-18506o18516-18584i18666-18734o18762-18830i;
19539 21638 CDS
ID metaerg.pl|03326
allgo_ids GO:0005515;
allko_ids K02489; K07697; K07716; K07710; K07640; K07656; K01768; K02668; K03388; K08479; K10916; K02030; K11527; K13587; K10715; K07678; K08801; K02482; K02480; K07638; K07653; K07636; K07709; K13532; K07644; K01769; K06379; K10681; K07647; K13040; K10942; K07675; K07717; K12767; K11383; K02486; K07769; K11520; K04757; K10125; K11629; K11357; K07641; K13598; K07646; K07639; K08475; K07652; K07654; K07649; K00936; K03407; K07679; K02478; K07648; K07651; K07698; K07778; K11354; K11633; K07768; K02575; K07711; K13533; K11328; K02484; K11356; K11640; K11711; K07642; K07643; K02491; K01090; K07645; K07677; K07708; K07704; K08282;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp001712795;
genomedb_acc GCF_001712795.1;
genomedb_target db:genomedb|GCF_001712795.1|WP_084227094.1 61 691 evalue:4.0e-187 qcov:90.30 identity:57.80;
kegg_pathway_id 02020; 03090; 00230; 05111; 00790;
kegg_pathway_name Two-component system - General; Type II secretion system; Purine metabolism; Vibrio cholerae pathogenic cycle; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF01590; PF02518; PF00512; PF08447;
pfam_desc GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold;
pfam_id GAF; HATPase_c; HisKA; PAS_3;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:5e-12 score:45.8 best_domain_score:44.4 name:GAF; db:Pfam-A.hmm|PF02518.26 evalue:2.9e-19 score:68.9 best_domain_score:67.0 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:2.6e-13 score:49.1 best_domain_score:47.3 name:HisKA; db:Pfam-A.hmm|PF08447.12 evalue:3.6e-16 score:58.5 best_domain_score:56.9 name:PAS_3;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:4.3e-13 score:48.7 best_domain_score:48.7 name:TIGR00229;
22758 21814 CDS
ID metaerg.pl|03327
allko_ids K00698; K12987; K12997; K12983; K00729; K12992; K00694; K00710; K00721;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091865.1 1 314 evalue:2.5e-165 qcov:100.00 identity:90.80;
kegg_pathway_id 01030; 00530; 00500; 00510;
kegg_pathway_name Glycan structures - biosynthesis 1; Aminosugars metabolism; Starch and sucrose metabolism; N-Glycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00535; PF10111; PF13641;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyltransferase like family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_2; Glyco_tranf_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.6e-30 score:105.4 best_domain_score:104.8 name:Glycos_transf_2; db:Pfam-A.hmm|PF10111.9 evalue:1.7e-08 score:33.5 best_domain_score:31.8 name:Glyco_tranf_2_2; db:Pfam-A.hmm|PF13641.6 evalue:2.1e-11 score:43.4 best_domain_score:42.5 name:Glyco_tranf_2_3;
22914 23276 CDS
ID metaerg.pl|03328
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02884;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017803821.1 1 120 evalue:1.5e-57 qcov:100.00 identity:99.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF01245;
pfam_desc Ribosomal protein L19;
pfam_id Ribosomal_L19;
pfam_target db:Pfam-A.hmm|PF01245.20 evalue:1.7e-46 score:156.0 best_domain_score:155.8 name:Ribosomal_L19;
sprot_desc 50S ribosomal protein L19;
sprot_id sp|Q8YLK1|RL19_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YLK1|RL19_NOSS1 1 120 evalue:5.7e-56 qcov:100.00 identity:90.00;
tigrfam_acc TIGR01024;
tigrfam_desc ribosomal protein bL19;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplS_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01024 evalue:6.6e-47 score:157.5 best_domain_score:157.3 name:TIGR01024;
23425 23498 tRNA
ID metaerg.pl|03329
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
name tRNA_Trp_cca;
23690 23911 CDS
ID metaerg.pl|03330
allgo_ids GO:0006605; GO:0006886; GO:0016020; GO:0016021; GO:0005886; GO:0042651; GO:0015450; GO:0065002; GO:0009306; GO:0043952;
allko_ids K03073;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093961.1 1 73 evalue:3.2e-31 qcov:100.00 identity:98.60;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00584;
pfam_desc SecE/Sec61-gamma subunits of protein translocation complex;
pfam_id SecE;
pfam_target db:Pfam-A.hmm|PF00584.20 evalue:7.8e-16 score:57.0 best_domain_score:56.8 name:SecE;
sprot_desc hypothetical protein;
sprot_id sp|P38382|SECE_SYNY3;
sprot_target db:uniprot_sprot|sp|P38382|SECE_SYNY3 20 73 evalue:8.9e-12 qcov:74.00 identity:59.30;
tigrfam_acc TIGR00964;
tigrfam_desc preprotein translocase, SecE subunit;
tigrfam_mainrole Protein fate;
tigrfam_name secE_bact;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00964 evalue:3.3e-17 score:61.3 best_domain_score:61.1 name:TIGR00964;
tm_num 1;
23690 23911 transmembrane_helix
ID metaerg.pl|03331
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i23828-23896o;
23911 24543 CDS
ID metaerg.pl|03332
allgo_ids GO:0006355; GO:0005829; GO:0006354; GO:0006353; GO:0032784; GO:0031564;
allko_ids K02601;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091863.1 1 210 evalue:8.5e-109 qcov:100.00 identity:95.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00467; PF02357;
pfam_desc KOW motif; Transcription termination factor nusG;
pfam_id KOW; NusG;
pfam_target db:Pfam-A.hmm|PF00467.29 evalue:3.2e-06 score:26.1 best_domain_score:24.6 name:KOW; db:Pfam-A.hmm|PF02357.19 evalue:1.5e-23 score:82.4 best_domain_score:81.7 name:NusG;
sprot_desc Transcription termination/antitermination protein NusG;
sprot_id sp|P36265|NUSG_SYNY3;
sprot_target db:uniprot_sprot|sp|P36265|NUSG_SYNY3 24 210 evalue:6.0e-77 qcov:89.00 identity:74.30;
tigrfam_acc TIGR00922;
tigrfam_desc transcription termination/antitermination factor NusG;
tigrfam_mainrole Transcription;
tigrfam_name nusG;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00922 evalue:3.1e-60 score:202.1 best_domain_score:201.8 name:TIGR00922;
24550 24975 CDS
ID metaerg.pl|03333
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0070180;
allko_ids K02867;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_006197126.1 1 141 evalue:3.2e-67 qcov:100.00 identity:96.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00298; PF03946;
pfam_desc Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain;
pfam_id Ribosomal_L11; Ribosomal_L11_N;
pfam_target db:Pfam-A.hmm|PF00298.19 evalue:4.6e-28 score:96.8 best_domain_score:96.0 name:Ribosomal_L11; db:Pfam-A.hmm|PF03946.14 evalue:2.3e-31 score:106.6 best_domain_score:106.6 name:Ribosomal_L11_N;
sprot_desc 50S ribosomal protein L11;
sprot_id sp|B2JA74|RL11_NOSP7;
sprot_target db:uniprot_sprot|sp|B2JA74|RL11_NOSP7 1 141 evalue:5.3e-69 qcov:100.00 identity:93.60;
tigrfam_acc TIGR01632;
tigrfam_desc ribosomal protein uL11;
tigrfam_mainrole Protein synthesis;
tigrfam_name L11_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01632 evalue:8.3e-64 score:212.9 best_domain_score:212.8 name:TIGR01632;
25097 25813 CDS
ID metaerg.pl|03334
allgo_ids GO:0015934; GO:0019843; GO:0003735; GO:0000049; GO:0006417; GO:0006412;
allko_ids K02863;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091862.1 1 238 evalue:5.6e-125 qcov:100.00 identity:97.90;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00687;
pfam_desc Ribosomal protein L1p/L10e family;
pfam_id Ribosomal_L1;
pfam_target db:Pfam-A.hmm|PF00687.21 evalue:1.7e-50 score:170.8 best_domain_score:170.5 name:Ribosomal_L1;
sprot_desc 50S ribosomal protein L1;
sprot_id sp|Q8YLJ7|RL1_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YLJ7|RL1_NOSS1 1 238 evalue:2.6e-116 qcov:100.00 identity:89.50;
tigrfam_acc TIGR01169;
tigrfam_desc ribosomal protein uL1;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplA_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01169 evalue:2.8e-97 score:323.7 best_domain_score:323.5 name:TIGR01169;
26530 27108 CDS
ID metaerg.pl|03335
allgo_ids GO:0005622; GO:0042254; GO:0015934; GO:0070180; GO:0003735; GO:0006412;
allko_ids K02864;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091861.1 1 192 evalue:1.1e-83 qcov:100.00 identity:91.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00466;
pfam_desc Ribosomal protein L10;
pfam_id Ribosomal_L10;
pfam_target db:Pfam-A.hmm|PF00466.20 evalue:3.3e-26 score:90.6 best_domain_score:89.0 name:Ribosomal_L10;
sprot_desc 50S ribosomal protein L10;
sprot_id sp|Q8YLJ6|RL10_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YLJ6|RL10_NOSS1 1 175 evalue:9.4e-77 qcov:91.10 identity:85.70;
27207 27599 CDS
ID metaerg.pl|03336
allgo_ids GO:0003735; GO:0006412; GO:0005840;
allko_ids K02935;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091860.1 1 130 evalue:9.1e-53 qcov:100.00 identity:93.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00542; PF16320;
pfam_desc Ribosomal protein L7/L12 C-terminal domain; Ribosomal protein L7/L12 dimerisation domain;
pfam_id Ribosomal_L12; Ribosomal_L12_N;
pfam_target db:Pfam-A.hmm|PF00542.19 evalue:1.8e-27 score:94.7 best_domain_score:93.1 name:Ribosomal_L12; db:Pfam-A.hmm|PF16320.5 evalue:4.1e-20 score:70.5 best_domain_score:67.4 name:Ribosomal_L12_N;
sprot_desc 50S ribosomal protein L7/L12;
sprot_id sp|B2JA77|RL7_NOSP7;
sprot_target db:uniprot_sprot|sp|B2JA77|RL7_NOSP7 1 130 evalue:3.3e-41 qcov:100.00 identity:75.40;
tigrfam_acc TIGR00855;
tigrfam_desc ribosomal protein bL12;
tigrfam_mainrole Protein synthesis;
tigrfam_name L12;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00855 evalue:1.9e-46 score:156.7 best_domain_score:156.5 name:TIGR00855;
29460 27664 CDS
ID metaerg.pl|03337
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K08856; K08282; K08333; K08855; K04444; K11889; K08854; K08790; K11228; K08810; K08884; K07778; K07683; K04442; K11623; K03407; K07682; K00924; K11265; K07673; K05688; K04688; K08853; K02486; K13414; K07675; K02178; K01728; K04443; K04372; K04445; K02480; K05097; K05096; K05098; K04373; K08809; K01768; K08850; K08286; K04421; K04420;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091859.1 1 598 evalue:3.8e-279 qcov:100.00 identity:87.40;
kegg_pathway_id 02020; 04010; 04011; 05012; 00040; 04150; 04110; 04111; 04140; 00230; 04510;
kegg_pathway_name Two-component system - General; MAPK signaling pathway; MAPK signaling pathway - yeast; Parkinson's disease; Pentose and glucuronate interconversions; mTOR signaling pathway; Cell cycle; Cell cycle - yeast; Regulation of autophagy; Purine metabolism; Focal adhesion;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF01636; PF00069; PF07714;
pfam_desc Phosphotransferase enzyme family; Protein kinase domain; Protein tyrosine kinase;
pfam_id APH; Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:5.7e-07 score:28.9 best_domain_score:17.5 name:APH; db:Pfam-A.hmm|PF00069.25 evalue:7e-35 score:119.9 best_domain_score:119.4 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:1.3e-14 score:53.4 best_domain_score:52.9 name:Pkinase_Tyr;
30142 29783 CDS
ID metaerg.pl|03338
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197121.1 6 119 evalue:9.3e-36 qcov:95.80 identity:72.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
30896 30351 CDS
ID metaerg.pl|03339
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091857.1 1 181 evalue:3.3e-85 qcov:100.00 identity:86.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
31286 30963 CDS
ID metaerg.pl|03340
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017803818.1 1 106 evalue:3.3e-48 qcov:99.10 identity:91.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
31400 31585 CDS
ID metaerg.pl|03341
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
35968 31862 CDS
ID metaerg.pl|03342
allec_ids 2.7.7.6;
allgo_ids GO:0003677; GO:0003899; GO:0006351;
allko_ids K03046; K03018; K13797; K03043; K03042; K02999; K03041; K03006;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091855.1 1 1368 evalue:0.0e+00 qcov:100.00 identity:96.40;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF13533; PF04983; PF05000; PF04998;
pfam_desc Biotin-lipoyl like; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5;
pfam_id Biotin_lipoyl_2; RNA_pol_Rpb1_3; RNA_pol_Rpb1_4; RNA_pol_Rpb1_5;
pfam_target db:Pfam-A.hmm|PF13533.6 evalue:8.9e-06 score:24.7 best_domain_score:15.6 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF04983.18 evalue:1.9e-08 score:33.6 best_domain_score:32.6 name:RNA_pol_Rpb1_3; db:Pfam-A.hmm|PF05000.17 evalue:4.2e-16 score:58.1 best_domain_score:56.9 name:RNA_pol_Rpb1_4; db:Pfam-A.hmm|PF04998.17 evalue:1.5e-58 score:197.6 best_domain_score:154.3 name:RNA_pol_Rpb1_5;
sprot_desc DNA-directed RNA polymerase subunit beta';
sprot_id sp|B2J1A0|RPOC2_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J1A0|RPOC2_NOSP7 1 1333 evalue:0.0e+00 qcov:97.40 identity:86.60;
tigrfam_acc TIGR02388;
tigrfam_desc DNA-directed RNA polymerase, beta'' subunit;
tigrfam_mainrole Transcription;
tigrfam_name rpoC2_cyan;
tigrfam_sub1role DNA-dependent RNA polymerase;
tigrfam_target db:TIGRFAMs.hmm|TIGR02388 evalue:0 score:2272.6 best_domain_score:2272.4 name:TIGR02388;
37955 36078 CDS
ID metaerg.pl|03343
allec_ids 2.7.7.6;
allgo_ids GO:0003677; GO:0003899; GO:0006351;
allko_ids K02999; K03041; K03006; K03042; K13797; K03018; K03043; K03046;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197115.1 1 625 evalue:0.0e+00 qcov:100.00 identity:98.10;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF04997; PF00623; PF04983;
pfam_desc RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 3;
pfam_id RNA_pol_Rpb1_1; RNA_pol_Rpb1_2; RNA_pol_Rpb1_3;
pfam_target db:Pfam-A.hmm|PF04997.12 evalue:1.7e-79 score:266.6 best_domain_score:266.2 name:RNA_pol_Rpb1_1; db:Pfam-A.hmm|PF00623.20 evalue:1.9e-39 score:134.8 best_domain_score:95.9 name:RNA_pol_Rpb1_2; db:Pfam-A.hmm|PF04983.18 evalue:1.5e-11 score:43.7 best_domain_score:42.5 name:RNA_pol_Rpb1_3;
sprot_desc DNA-directed RNA polymerase subunit gamma;
sprot_id sp|Q3M5C9|RPOC1_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M5C9|RPOC1_ANAVT 1 624 evalue:0.0e+00 qcov:99.80 identity:96.30;
tigrfam_acc TIGR02387;
tigrfam_desc DNA-directed RNA polymerase, gamma subunit;
tigrfam_name rpoC1_cyan;
tigrfam_target db:TIGRFAMs.hmm|TIGR02387 evalue:0 score:1278.1 best_domain_score:1277.9 name:TIGR02387;
41529 38227 CDS
ID metaerg.pl|03344
allec_ids 2.7.7.6;
allgo_ids GO:0003677; GO:0003899; GO:0006351; GO:0032549;
allko_ids K03045; K03046; K03021; K03044; K03002; K03010; K03043; K13797; K13798;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093960.1 1 1100 evalue:0.0e+00 qcov:100.00 identity:99.30;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF04563; PF04561; PF04565; PF10385; PF00562; PF04560;
pfam_desc RNA polymerase beta subunit; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 3; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 7;
pfam_id RNA_pol_Rpb2_1; RNA_pol_Rpb2_2; RNA_pol_Rpb2_3; RNA_pol_Rpb2_45; RNA_pol_Rpb2_6; RNA_pol_Rpb2_7;
pfam_target db:Pfam-A.hmm|PF04563.15 evalue:8.8e-22 score:76.8 best_domain_score:75.0 name:RNA_pol_Rpb2_1; db:Pfam-A.hmm|PF04561.14 evalue:8.3e-55 score:184.6 best_domain_score:183.5 name:RNA_pol_Rpb2_2; db:Pfam-A.hmm|PF04565.16 evalue:1.8e-30 score:104.1 best_domain_score:103.1 name:RNA_pol_Rpb2_3; db:Pfam-A.hmm|PF10385.9 evalue:3.1e-16 score:58.6 best_domain_score:55.1 name:RNA_pol_Rpb2_45; db:Pfam-A.hmm|PF00562.28 evalue:2.5e-160 score:533.0 best_domain_score:530.9 name:RNA_pol_Rpb2_6; db:Pfam-A.hmm|PF04560.20 evalue:1.7e-25 score:88.5 best_domain_score:87.6 name:RNA_pol_Rpb2_7;
sprot_desc DNA-directed RNA polymerase subunit beta;
sprot_id sp|Q3M5D0|RPOB_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M5D0|RPOB_ANAVT 1 1100 evalue:0.0e+00 qcov:100.00 identity:93.90;
tigrfam_acc TIGR02013;
tigrfam_desc DNA-directed RNA polymerase, beta subunit;
tigrfam_mainrole Transcription;
tigrfam_name rpoB;
tigrfam_sub1role DNA-dependent RNA polymerase;
tigrfam_target db:TIGRFAMs.hmm|TIGR02013 evalue:0 score:1732.6 best_domain_score:1029.4 name:TIGR02013;
43091 42306 CDS
ID metaerg.pl|03345
allec_ids 3.1.1.96;
allgo_ids GO:0016788; GO:0005829; GO:0051499; GO:0016888; GO:0046872; GO:0019478;
allko_ids K03424;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197113.1 1 261 evalue:1.3e-138 qcov:100.00 identity:93.50;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF01026;
pfam_desc TatD related DNase;
pfam_id TatD_DNase;
pfam_target db:Pfam-A.hmm|PF01026.21 evalue:4.1e-74 score:248.4 best_domain_score:248.2 name:TatD_DNase;
sprot_desc D-aminoacyl-tRNA deacylase;
sprot_id sp|P73335|DTD3_SYNY3;
sprot_target db:uniprot_sprot|sp|P73335|DTD3_SYNY3 1 259 evalue:3.9e-94 qcov:99.20 identity:66.80;
tigrfam_acc TIGR00010;
tigrfam_desc hydrolase, TatD family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00010;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00010 evalue:3.9e-84 score:281.2 best_domain_score:281.0 name:TIGR00010;
43553 43224 CDS
ID metaerg.pl|03346
allgo_ids GO:0003723; GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02968;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197112.1 1 109 evalue:1.7e-47 qcov:100.00 identity:98.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF01649;
pfam_desc Ribosomal protein S20;
pfam_id Ribosomal_S20p;
pfam_target db:Pfam-A.hmm|PF01649.18 evalue:2.6e-28 score:97.7 best_domain_score:97.5 name:Ribosomal_S20p;
sprot_desc 30S ribosomal protein S20;
sprot_id sp|Q8YWL3|RS20_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YWL3|RS20_NOSS1 12 104 evalue:9.8e-31 qcov:85.30 identity:74.20;
tigrfam_acc TIGR00029;
tigrfam_desc ribosomal protein bS20;
tigrfam_mainrole Protein synthesis;
tigrfam_name S20;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00029 evalue:1.7e-25 score:88.5 best_domain_score:88.3 name:TIGR00029;
44194 45495 CDS
ID metaerg.pl|03347
allec_ids 1.1.1.23;
allgo_ids GO:0000105; GO:0004399; GO:0008270; GO:0051287; GO:0055114;
allko_ids K00013; K01496;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197111.1 1 433 evalue:2.4e-230 qcov:100.00 identity:97.20;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id HISTSYN-PWY; PRPP-PWY;
metacyc_pathway_name L-histidine biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type HISTIDINE-SYN;; Super-Pathways;;
pfam_acc PF00815;
pfam_desc Histidinol dehydrogenase;
pfam_id Histidinol_dh;
pfam_target db:Pfam-A.hmm|PF00815.20 evalue:3.8e-170 score:565.5 best_domain_score:565.3 name:Histidinol_dh;
sprot_desc Histidinol dehydrogenase 2;
sprot_id sp|Q3M5D3|HISX2_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M5D3|HISX2_ANAVT 1 433 evalue:6.8e-216 qcov:100.00 identity:89.80;
tigrfam_acc TIGR00069;
tigrfam_desc histidinol dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name hisD;
tigrfam_sub1role Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00069 evalue:6.9e-164 score:544.9 best_domain_score:544.7 name:TIGR00069;
45569 45994 CDS
ID metaerg.pl|03348
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091851.1 1 141 evalue:3.0e-57 qcov:100.00 identity:85.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:5e-30 score:104.1 best_domain_score:103.9 name:Usp;
sprot_desc Universal stress protein YxiE;
sprot_id sp|P42297|YXIE_BACSU;
sprot_target db:uniprot_sprot|sp|P42297|YXIE_BACSU 1 139 evalue:3.7e-06 qcov:98.60 identity:28.90;
46400 46020 CDS
ID metaerg.pl|03349
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091850.1 1 126 evalue:9.1e-66 qcov:100.00 identity:95.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
46620 47525 CDS
ID metaerg.pl|03350
allgo_ids GO:0005737; GO:0006457; GO:0051082;
allko_ids K04083;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091848.1 1 300 evalue:4.4e-151 qcov:99.70 identity:92.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF01430;
pfam_desc Hsp33 protein;
pfam_id HSP33;
pfam_target db:Pfam-A.hmm|PF01430.19 evalue:2.7e-79 score:265.6 best_domain_score:265.4 name:HSP33;
sprot_desc 33 kDa chaperonin;
sprot_id sp|Q8YWL7|HSLO_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YWL7|HSLO_NOSS1 1 300 evalue:2.7e-147 qcov:99.70 identity:89.00;
47664 49730 CDS
ID metaerg.pl|03351
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091847.1 1 680 evalue:0.0e+00 qcov:98.80 identity:90.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
tm_num 1;
47664 49730 transmembrane_helix
ID metaerg.pl|03352
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i47910-47978o;
49904 51960 repeat_region
ID metaerg.pl|03353
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
note CRISPR with 29 repeat units;
rpt_family CRISPR;
rpt_type direct;
rpt_unit_seq GTTTCAATCCCTGATAGGGATTATTAGTAATTGGAAC;
52488 52216 CDS
ID metaerg.pl|03354
allec_ids 3.1.-.-;
allgo_ids GO:0004521; GO:0046872; GO:0051607; GO:0043571;
allko_ids K09951;
casgene_acc cd09638_cas2_CAS-I:CAS-II:CAS-III; cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V; COG1343_cas2_CAS-I:CAS-II:CAS-III; mkCas0081_cas2_CAS-I:CAS-II:CAS-III; mkCas0128_cas2_CAS-I:CAS-II:CAS-III; pfam09827_cas2_CAS-I:CAS-II:CAS-III;
casgene_name cas2; cas2; cas2; cas2; cas2; cas2;
casgene_target db:casgenes.hmm|cd09638_cas2_CAS-I:CAS-II:CAS-III evalue:4.5e-22 score:77.5 best_domain_score:77.2 name:cas2; db:casgenes.hmm|cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V evalue:3.7e-32 score:109.6 best_domain_score:109.3 name:cas2; db:casgenes.hmm|COG1343_cas2_CAS-I:CAS-II:CAS-III evalue:5.1e-30 score:102.9 best_domain_score:102.7 name:cas2; db:casgenes.hmm|mkCas0081_cas2_CAS-I:CAS-II:CAS-III evalue:3.3e-12 score:45.8 best_domain_score:45.6 name:cas2; db:casgenes.hmm|mkCas0128_cas2_CAS-I:CAS-II:CAS-III evalue:5.2e-12 score:45.2 best_domain_score:45.2 name:cas2; db:casgenes.hmm|pfam09827_cas2_CAS-I:CAS-II:CAS-III evalue:3e-30 score:103.6 best_domain_score:103.4 name:cas2;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091846.1 1 90 evalue:7.5e-46 qcov:100.00 identity:95.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF09827;
pfam_desc CRISPR associated protein Cas2;
pfam_id CRISPR_Cas2;
pfam_target db:Pfam-A.hmm|PF09827.9 evalue:2.4e-30 score:103.8 best_domain_score:103.6 name:CRISPR_Cas2;
sprot_desc CRISPR-associated endoribonuclease Cas2 3;
sprot_id sp|Q6ZEA5|CAS2C_SYNY3;
sprot_target db:uniprot_sprot|sp|Q6ZEA5|CAS2C_SYNY3 1 82 evalue:2.6e-13 qcov:91.10 identity:47.00;
tigrfam_acc TIGR01573;
tigrfam_desc CRISPR-associated endonuclease Cas2;
tigrfam_name cas2;
tigrfam_target db:TIGRFAMs.hmm|TIGR01573 evalue:1.1e-21 score:76.0 best_domain_score:75.9 name:TIGR01573;
53501 52500 CDS
ID metaerg.pl|03355
allec_ids 3.1.-.-;
allgo_ids GO:0003676; GO:0004519; GO:0043571; GO:0046872; GO:0051607; GO:0003677;
allko_ids K15342;
casgene_acc cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V; cd09636_cas1_CAS-I:CAS-II:CAS-III; cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C; cd09721_cas1_CAS-I-C; cd09722_cas1_CAS-I-B; COG1518_cas1_CAS-I:CAS-II:CAS-III; pfam01867_cas1_CAS-I:CAS-II:CAS-III;
casgene_name cas1; cas1; cas1; cas1; cas1; cas1; cas1;
casgene_target db:casgenes.hmm|cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V evalue:1.7e-97 score:325.5 best_domain_score:325.3 name:cas1; db:casgenes.hmm|cd09636_cas1_CAS-I:CAS-II:CAS-III evalue:1.4e-79 score:266.2 best_domain_score:265.8 name:cas1; db:casgenes.hmm|cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C evalue:1.7e-16 score:59.4 best_domain_score:59.0 name:cas1; db:casgenes.hmm|cd09721_cas1_CAS-I-C evalue:1.1e-95 score:319.8 best_domain_score:319.7 name:cas1; db:casgenes.hmm|cd09722_cas1_CAS-I-B evalue:3.4e-45 score:153.9 best_domain_score:153.7 name:cas1; db:casgenes.hmm|COG1518_cas1_CAS-I:CAS-II:CAS-III evalue:3.2e-90 score:301.7 best_domain_score:301.5 name:cas1; db:casgenes.hmm|pfam01867_cas1_CAS-I:CAS-II:CAS-III evalue:3.5e-88 score:294.8 best_domain_score:294.6 name:cas1;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091845.1 1 333 evalue:3.2e-174 qcov:100.00 identity:93.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01867;
pfam_desc CRISPR associated protein Cas1;
pfam_id Cas_Cas1;
pfam_target db:Pfam-A.hmm|PF01867.16 evalue:2.4e-93 score:311.6 best_domain_score:311.4 name:Cas_Cas1;
sprot_desc CRISPR-associated endonuclease Cas1 3;
sprot_id sp|Q53VV5|CAS1C_THET8;
sprot_target db:uniprot_sprot|sp|Q53VV5|CAS1C_THET8 1 333 evalue:1.7e-57 qcov:100.00 identity:39.40;
tigrfam_acc TIGR00287; TIGR04093;
tigrfam_desc CRISPR-associated endonuclease Cas1; CRISPR-associated endonuclease Cas1, subtype CYANO;
tigrfam_name cas1; cas1_CYANO;
tigrfam_target db:TIGRFAMs.hmm|TIGR00287 evalue:8.5e-96 score:320.0 best_domain_score:319.8 name:TIGR00287; db:TIGRFAMs.hmm|TIGR04093 evalue:2.9e-122 score:406.9 best_domain_score:406.8 name:TIGR04093;
54377 53787 CDS
ID metaerg.pl|03356
allec_ids 3.1.-.-;
allgo_ids GO:0051539; GO:0003677; GO:0004519; GO:0004527; GO:0046872; GO:0051607; GO:0043571;
allko_ids K15342;
casgene_acc cd09637_cas4_CAS-I:CAS-II:CAS-V; COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B; pfam01930_cas4_CAS-I;
casgene_name cas4; cas4; cas4;
casgene_target db:casgenes.hmm|cd09637_cas4_CAS-I:CAS-II:CAS-V evalue:9.1e-49 score:165.3 best_domain_score:165.1 name:cas4; db:casgenes.hmm|COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B evalue:3.3e-42 score:143.9 best_domain_score:143.8 name:cas4; db:casgenes.hmm|pfam01930_cas4_CAS-I evalue:6.6e-29 score:100.4 best_domain_score:100.2 name:cas4;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091844.1 2 196 evalue:6.7e-108 qcov:99.50 identity:97.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01930; PF12705;
pfam_desc Domain of unknown function DUF83; PD-(D/E)XK nuclease superfamily;
pfam_id Cas_Cas4; PDDEXK_1;
pfam_target db:Pfam-A.hmm|PF01930.17 evalue:1.1e-30 score:106.1 best_domain_score:105.9 name:Cas_Cas4; db:Pfam-A.hmm|PF12705.7 evalue:5.2e-07 score:29.1 best_domain_score:28.9 name:PDDEXK_1;
sprot_desc CRISPR-associated exonuclease Cas4/endonuclease Cas1 fusion;
sprot_id sp|Q74H36|CS4F1_GEOSL;
sprot_target db:uniprot_sprot|sp|Q74H36|CS4F1_GEOSL 6 183 evalue:1.3e-20 qcov:90.80 identity:31.70;
tigrfam_acc TIGR00372;
tigrfam_desc CRISPR-associated protein Cas4;
tigrfam_name cas4;
tigrfam_target db:TIGRFAMs.hmm|TIGR00372 evalue:3.9e-51 score:172.6 best_domain_score:172.4 name:TIGR00372;
55272 54442 CDS
ID metaerg.pl|03357
allec_ids 3.1.-.-;
casgene_acc cd09652_cas6_CAS-I:CAS-III; COG5551_cas6_CAS-III; pfam10040_cas6_CAS-III:CAS-IV;
casgene_name cas6; cas6; cas6;
casgene_target db:casgenes.hmm|cd09652_cas6_CAS-I:CAS-III evalue:3e-34 score:118.3 best_domain_score:118.1 name:cas6; db:casgenes.hmm|COG5551_cas6_CAS-III evalue:1.6e-73 score:246.7 best_domain_score:246.6 name:cas6; db:casgenes.hmm|pfam10040_cas6_CAS-III:CAS-IV evalue:1.3e-21 score:76.6 best_domain_score:75.8 name:cas6;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091843.1 1 273 evalue:1.8e-138 qcov:98.90 identity:89.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF10040;
pfam_desc CRISPR-associated endoribonuclease Cas6;
pfam_id CRISPR_Cas6;
pfam_target db:Pfam-A.hmm|PF10040.9 evalue:2.3e-21 score:75.5 best_domain_score:74.1 name:CRISPR_Cas6;
tigrfam_acc TIGR01877;
tigrfam_desc CRISPR-associated endoribonuclease Cas6;
tigrfam_name cas_cas6;
tigrfam_target db:TIGRFAMs.hmm|TIGR01877 evalue:3.6e-24 score:85.5 best_domain_score:85.1 name:TIGR01877;
55964 55353 CDS
ID metaerg.pl|03358
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091842.1 1 203 evalue:1.3e-106 qcov:100.00 identity:94.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF13640; PF13661;
pfam_desc 2OG-Fe(II) oxygenase superfamily; 2OG-Fe(II) oxygenase superfamily;
pfam_id 2OG-FeII_Oxy_3; 2OG-FeII_Oxy_4;
pfam_target db:Pfam-A.hmm|PF13640.6 evalue:1.3e-10 score:41.3 best_domain_score:40.5 name:2OG-FeII_Oxy_3; db:Pfam-A.hmm|PF13661.6 evalue:0.00017 score:21.4 best_domain_score:20.5 name:2OG-FeII_Oxy_4;
56845 56138 CDS
ID metaerg.pl|03359
casgene_acc cd09711_csc1gr5_CAS-I-D; mkCas0129_csc1gr5_CAS-I-D;
casgene_name csc1gr5; csc1gr5;
casgene_target db:casgenes.hmm|cd09711_csc1gr5_CAS-I-D evalue:1.6e-84 score:281.9 best_domain_score:281.7 name:csc1gr5; db:casgenes.hmm|mkCas0129_csc1gr5_CAS-I-D evalue:1.3e-09 score:37.0 best_domain_score:36.4 name:csc1gr5;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091840.1 1 235 evalue:7.3e-125 qcov:100.00 identity:93.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
tigrfam_acc TIGR03159;
tigrfam_desc CRISPR type I-D/CYANO-associated protein Csc1;
tigrfam_name cas_Csc1;
tigrfam_target db:TIGRFAMs.hmm|TIGR03159 evalue:4.4e-80 score:267.4 best_domain_score:266.9 name:TIGR03159;
57861 56851 CDS
ID metaerg.pl|03360
casgene_acc cd09709_csc2gr7_CAS-I-D;
casgene_name csc2gr7;
casgene_target db:casgenes.hmm|cd09709_csc2gr7_CAS-I-D evalue:3e-105 score:350.8 best_domain_score:350.5 name:csc2gr7;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091839.1 1 336 evalue:4.7e-178 qcov:100.00 identity:95.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF18320;
pfam_desc Csc2 Crispr;
pfam_id Csc2;
pfam_target db:Pfam-A.hmm|PF18320.1 evalue:8.9e-132 score:437.8 best_domain_score:437.6 name:Csc2;
tigrfam_acc TIGR03157;
tigrfam_desc CRISPR type I-D/CYANO-associated protein Csc2;
tigrfam_name cas_Csc2;
tigrfam_target db:TIGRFAMs.hmm|TIGR03157 evalue:8.3e-112 score:372.3 best_domain_score:372.0 name:TIGR03157;
61310 58011 CDS
ID metaerg.pl|03361
casgene_acc cd09712_cas10d_CAS-I-D; mkCas0201_cas10d_CAS-I-D;
casgene_name cas10d; cas10d;
casgene_target db:casgenes.hmm|cd09712_cas10d_CAS-I-D evalue:2.1e-294 score:978.2 best_domain_score:977.9 name:cas10d; db:casgenes.hmm|mkCas0201_cas10d_CAS-I-D evalue:2.2e-24 score:84.9 best_domain_score:40.1 name:cas10d;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira sp002154695;
genomedb_acc GCF_002154695.1;
genomedb_target db:genomedb|GCF_002154695.1|WP_086689580.1 29 1092 evalue:0.0e+00 qcov:96.80 identity:92.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
tigrfam_acc TIGR03174;
tigrfam_desc CRISPR type I-D/CYANO-associated protein Csc3/Cas10d;
tigrfam_name cas_Csc3;
tigrfam_target db:TIGRFAMs.hmm|TIGR03174 evalue:0 score:1050.0 best_domain_score:1049.8 name:TIGR03174;
61746 61303 CDS
ID metaerg.pl|03362
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira laxa;
genomedb_acc GCF_002368055.1;
genomedb_target db:genomedb|GCF_002368055.1|WP_096577325.1 1 146 evalue:2.9e-63 qcov:99.30 identity:82.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF01934;
pfam_desc Protein of unknown function DUF86;
pfam_id DUF86;
pfam_target db:Pfam-A.hmm|PF01934.17 evalue:3.2e-22 score:77.9 best_domain_score:77.6 name:DUF86;
62195 61743 CDS
ID metaerg.pl|03363
allgo_ids GO:0016779;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira diplosiphon;
genomedb_acc GCF_002368275.1;
genomedb_target db:genomedb|GCF_002368275.1|WP_045870813.1 1 150 evalue:3.0e-63 qcov:100.00 identity:82.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF01909; PF18765;
pfam_desc Nucleotidyltransferase domain; Polymerase beta, Nucleotidyltransferase;
pfam_id NTP_transf_2; Polbeta;
pfam_target db:Pfam-A.hmm|PF01909.23 evalue:3.1e-08 score:33.0 best_domain_score:32.1 name:NTP_transf_2; db:Pfam-A.hmm|PF18765.1 evalue:1.5e-17 score:62.7 best_domain_score:61.7 name:Polbeta;
64517 62340 CDS
ID metaerg.pl|03364
allgo_ids GO:0003676; GO:0005524;
casgene_acc cd09639_cas3_CAS-I; cd09710_cas3_CAS-I-D; COG1203_cas3_CAS-I; mkCas0139_cas3_CAS-I;
casgene_name cas3; cas3; cas3; cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:2e-10 score:39.5 best_domain_score:35.3 name:cas3; db:casgenes.hmm|cd09710_cas3_CAS-I-D evalue:4.5e-134 score:446.2 best_domain_score:445.8 name:cas3; db:casgenes.hmm|COG1203_cas3_CAS-I evalue:1.7e-12 score:45.7 best_domain_score:29.0 name:cas3; db:casgenes.hmm|mkCas0139_cas3_CAS-I evalue:1.6e-08 score:32.3 best_domain_score:29.9 name:cas3;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091832.1 1 725 evalue:0.0e+00 qcov:100.00 identity:94.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00270;
pfam_desc DEAD/DEAH box helicase;
pfam_id DEAD;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:9.1e-08 score:31.3 best_domain_score:30.1 name:DEAD;
tigrfam_acc TIGR03158;
tigrfam_desc CRISPR-associated helicase Cas3, subtype CYANO;
tigrfam_name cas3_cyano;
tigrfam_target db:TIGRFAMs.hmm|TIGR03158 evalue:3e-133 score:443.5 best_domain_score:443.2 name:TIGR03158;
64615 65481 CDS
ID metaerg.pl|03365
casgene_acc COG2378_WYL_CAS-I:CAS-III; pfam13280_WYL_CAS-I:CAS-III;
casgene_name WYL; WYL;
casgene_target db:casgenes.hmm|COG2378_WYL_CAS-I:CAS-III evalue:1.7e-07 score:30.3 best_domain_score:28.4 name:WYL; db:casgenes.hmm|pfam13280_WYL_CAS-I:CAS-III evalue:8.9e-12 score:44.6 best_domain_score:42.0 name:WYL;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091830.1 1 288 evalue:2.0e-156 qcov:100.00 identity:93.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF13280;
pfam_desc WYL domain;
pfam_id WYL;
pfam_target db:Pfam-A.hmm|PF13280.6 evalue:2.8e-10 score:39.7 best_domain_score:36.2 name:WYL;
65905 65525 CDS
ID metaerg.pl|03366
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091829.1 1 126 evalue:6.8e-61 qcov:100.00 identity:93.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF18480;
pfam_desc Domain of unknown function (DUF5615);
pfam_id DUF5615;
pfam_target db:Pfam-A.hmm|PF18480.1 evalue:7.8e-21 score:72.9 best_domain_score:72.3 name:DUF5615;
66224 65898 CDS
ID metaerg.pl|03367
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091828.1 1 107 evalue:6.4e-52 qcov:99.10 identity:97.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF04255;
pfam_desc Protein of unknown function (DUF433);
pfam_id DUF433;
pfam_target db:Pfam-A.hmm|PF04255.14 evalue:5.1e-23 score:79.9 best_domain_score:79.4 name:DUF433;
67108 66245 CDS
ID metaerg.pl|03368
allgo_ids GO:0016301;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091827.1 1 287 evalue:9.4e-159 qcov:100.00 identity:94.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF01636; PF03881;
pfam_desc Phosphotransferase enzyme family; Fructosamine kinase;
pfam_id APH; Fructosamin_kin;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:2e-10 score:40.2 best_domain_score:39.8 name:APH; db:Pfam-A.hmm|PF03881.14 evalue:1.5e-121 score:404.3 best_domain_score:404.1 name:Fructosamin_kin;
sprot_desc Putative kinase slr1563;
sprot_id sp|P74594|Y1563_SYNY3;
sprot_target db:uniprot_sprot|sp|P74594|Y1563_SYNY3 2 287 evalue:3.3e-102 qcov:99.70 identity:60.80;
68455 67184 CDS
ID metaerg.pl|03369
allec_ids 3.4.24.-;
allgo_ids GO:0046872; GO:0004222;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091826.1 1 423 evalue:9.1e-227 qcov:100.00 identity:96.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00675; PF05193;
pfam_desc Insulinase (Peptidase family M16); Peptidase M16 inactive domain;
pfam_id Peptidase_M16; Peptidase_M16_C;
pfam_target db:Pfam-A.hmm|PF00675.20 evalue:1.9e-31 score:108.3 best_domain_score:107.5 name:Peptidase_M16; db:Pfam-A.hmm|PF05193.21 evalue:8.2e-29 score:100.1 best_domain_score:99.5 name:Peptidase_M16_C;
sprot_desc Uncharacterized zinc protease RBE_0522;
sprot_id sp|Q1RJ61|Y522_RICBR;
sprot_target db:uniprot_sprot|sp|Q1RJ61|Y522_RICBR 18 420 evalue:2.6e-34 qcov:95.30 identity:26.20;
68602 70128 CDS
ID metaerg.pl|03370
allec_ids 1.3.99.29; 1.3.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0016627; GO:0016117;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091822.1 1 508 evalue:2.4e-290 qcov:100.00 identity:96.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id PWY-2582; PWY-699; PWY-6544; CARNMET-PWY;
metacyc_pathway_name brassinosteroid biosynthesis II;; brassinosteroid biosynthesis I;; superpathway of C28 brassinosteroid biosynthesis;; L-carnitine degradation I;;
metacyc_pathway_type Brassinosteroid-Biosynthesis;; Brassinosteroid-Biosynthesis;; Super-Pathways;; CARN-DEG;;
pfam_acc PF01593; PF01266; PF00890; PF13450;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; NAD(P)-binding Rossmann-like domain;
pfam_id Amino_oxidase; DAO; FAD_binding_2; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:1.1e-12 score:47.3 best_domain_score:42.7 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:8.9e-07 score:28.0 best_domain_score:21.9 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.1e-07 score:30.5 best_domain_score:22.9 name:FAD_binding_2; db:Pfam-A.hmm|PF13450.6 evalue:1.7e-15 score:56.3 best_domain_score:55.2 name:NAD_binding_8;
sprot_desc zeta-carotene-forming phytoene desaturase;
sprot_id sp|P54979|CRTJ_MYXXA;
sprot_target db:uniprot_sprot|sp|P54979|CRTJ_MYXXA 12 500 evalue:1.6e-19 qcov:96.30 identity:25.00;
tigrfam_acc TIGR02733;
tigrfam_desc C-3',4' desaturase CrtD;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name desat_CrtD;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02733 evalue:2.8e-238 score:790.6 best_domain_score:790.4 name:TIGR02733;
tm_num 1;
68602 70128 transmembrane_helix
ID metaerg.pl|03371
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i68638-68706o;
70310 70678 CDS
ID metaerg.pl|03372
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091821.1 1 122 evalue:2.9e-61 qcov:100.00 identity:100.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
71342 70731 CDS
ID metaerg.pl|03373
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091820.1 1 203 evalue:2.7e-104 qcov:100.00 identity:95.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
sp YES;
tm_num 1;
70731 70826 signal_peptide
ID metaerg.pl|03374
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
71342 70731 transmembrane_helix
ID metaerg.pl|03375
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i70749-70808o;
71490 71771 CDS
ID metaerg.pl|03376
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091816.1 1 93 evalue:3.0e-37 qcov:100.00 identity:90.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
71926 72381 CDS
ID metaerg.pl|03377
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091815.1 1 151 evalue:2.1e-80 qcov:100.00 identity:92.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF13274;
pfam_desc Protein of unknown function (DUF4065);
pfam_id DUF4065;
pfam_target db:Pfam-A.hmm|PF13274.6 evalue:1.2e-22 score:80.1 best_domain_score:79.1 name:DUF4065;
73818 72796 CDS
ID metaerg.pl|03378
allec_ids 1.1.1.103;
allgo_ids GO:0055114; GO:0005737; GO:0016597; GO:0008743; GO:0070403; GO:0008270; GO:0019518; GO:0051289; GO:0006566;
allko_ids K00121; K13951; K00001; K13953; K13952; K07538; K13980; K00060;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091813.1 1 340 evalue:3.3e-187 qcov:100.00 identity:95.00;
kegg_pathway_id 00260; 00120; 00632; 00010; 00624; 00641; 00680; 00350; 00071;
kegg_pathway_name Glycine, serine and threonine metabolism; Bile acid biosynthesis; Benzoate degradation via CoA ligation; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; 3-Chloroacrylic acid degradation; Methane metabolism; Tyrosine metabolism; Fatty acid metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id PWY-5448; THRDLCTCAT-PWY; THREOCAT-PWY; THREONINE-DEG2-PWY;
metacyc_pathway_name ; L-threonine degradation III (to methylglyoxal);; superpathway of L-threonine metabolism;; L-threonine degradation II;;
metacyc_pathway_type ; THREONINE-DEG;; Super-Pathways; THREONINE-DEG;; THREONINE-DEG;;
pfam_acc PF08240; PF00107; PF16912;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Glucose dehydrogenase C-terminus;
pfam_id ADH_N; ADH_zinc_N; Glu_dehyd_C;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:7.6e-26 score:89.4 best_domain_score:88.4 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:8.8e-22 score:76.7 best_domain_score:74.4 name:ADH_zinc_N; db:Pfam-A.hmm|PF16912.5 evalue:2.3e-09 score:36.3 best_domain_score:35.9 name:Glu_dehyd_C;
sprot_desc L-threonine 3-dehydrogenase;
sprot_id sp|Q5JI69|TDH_THEKO;
sprot_target db:uniprot_sprot|sp|Q5JI69|TDH_THEKO 7 340 evalue:8.3e-36 qcov:98.20 identity:31.20;
74101 73886 CDS
ID metaerg.pl|03379
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091812.1 1 63 evalue:3.6e-27 qcov:88.70 identity:88.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
75223 74156 CDS
ID metaerg.pl|03380
allec_ids 2.4.-.-;
allgo_ids GO:0016757;
allko_ids K03867; K13677; K00749; K00712; K03844; K13668;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198677.1 1 347 evalue:1.1e-177 qcov:97.70 identity:90.80;
kegg_pathway_id 01030; 00510;
kegg_pathway_name Glycan structures - biosynthesis 1; N-Glycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id LPSSYN-PWY; LIPA-CORESYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF00534; PF13439; PF13692; PF13579;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1; Glycosyl transferase 4-like domain;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_4; Glyco_trans_4_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:2.2e-23 score:81.9 best_domain_score:81.2 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:1.3e-14 score:53.8 best_domain_score:52.9 name:Glyco_transf_4; db:Pfam-A.hmm|PF13692.6 evalue:2.3e-16 score:59.7 best_domain_score:56.6 name:Glyco_trans_1_4; db:Pfam-A.hmm|PF13579.6 evalue:1.9e-08 score:34.1 best_domain_score:33.2 name:Glyco_trans_4_4;
sprot_desc Uncharacterized glycosyltransferase MJ1607;
sprot_id sp|Q59002|Y1607_METJA;
sprot_target db:uniprot_sprot|sp|Q59002|Y1607_METJA 1 283 evalue:9.4e-14 qcov:79.70 identity:25.20;
75669 76451 CDS
ID metaerg.pl|03381
allec_ids 3.1.11.2;
allko_ids K01741; K10772;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198676.1 1 260 evalue:5.7e-139 qcov:100.00 identity:90.40;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF03372;
pfam_desc Endonuclease/Exonuclease/phosphatase family;
pfam_id Exo_endo_phos;
pfam_target db:Pfam-A.hmm|PF03372.23 evalue:1e-19 score:70.2 best_domain_score:70.0 name:Exo_endo_phos;
tigrfam_acc TIGR00195; TIGR00633;
tigrfam_desc exodeoxyribonuclease III; exodeoxyribonuclease III (xth);
tigrfam_mainrole DNA metabolism; DNA metabolism;
tigrfam_name exoDNase_III; xth;
tigrfam_sub1role DNA replication, recombination, and repair; DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00195 evalue:2.8e-90 score:301.5 best_domain_score:301.4 name:TIGR00195; db:TIGRFAMs.hmm|TIGR00633 evalue:8.2e-81 score:270.4 best_domain_score:270.3 name:TIGR00633;
76489 77364 CDS
ID metaerg.pl|03382
allec_ids 1.-.-.-;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0009842; GO:0016491;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091810.1 1 291 evalue:3.5e-153 qcov:100.00 identity:96.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id PWY-5469; PWY-5479; PWY-5987; PWY-6113; PWYG-321; PWY-4302; PWY-5271; PWY-5826; PWY-2821;
metacyc_pathway_name sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;;
metacyc_pathway_type LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;;
pfam_acc PF01073; PF01370; PF13460; PF05368;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; NAD(P)H-binding ; NmrA-like family;
pfam_id 3Beta_HSD; Epimerase; NAD_binding_10; NmrA;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:2.3e-07 score:29.3 best_domain_score:28.6 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:6.7e-11 score:41.3 best_domain_score:36.1 name:Epimerase; db:Pfam-A.hmm|PF13460.6 evalue:1.7e-33 score:115.3 best_domain_score:114.9 name:NAD_binding_10; db:Pfam-A.hmm|PF05368.13 evalue:1.3e-26 score:92.8 best_domain_score:92.5 name:NmrA;
sprot_desc hypothetical protein;
sprot_id sp|P48279|YCF39_CYAPA;
sprot_target db:uniprot_sprot|sp|P48279|YCF39_CYAPA 3 290 evalue:1.0e-21 qcov:99.00 identity:27.60;
77542 79038 CDS
ID metaerg.pl|03383
allgo_ids GO:0016021; GO:0005886; GO:0044179; GO:0009306;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091809.1 1 498 evalue:3.1e-242 qcov:100.00 identity:92.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00364; PF13437; PF16576;
pfam_desc Biotin-requiring enzyme; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:7.6e-06 score:24.9 best_domain_score:14.0 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13437.6 evalue:1.9e-16 score:59.9 best_domain_score:59.1 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:4.8e-09 score:35.0 best_domain_score:29.4 name:HlyD_D23;
sprot_desc Leukotoxin secretion protein D;
sprot_id sp|P16534|HLYD_MANHA;
sprot_target db:uniprot_sprot|sp|P16534|HLYD_MANHA 43 498 evalue:1.6e-19 qcov:91.60 identity:25.40;
tigrfam_acc TIGR01843;
tigrfam_desc type I secretion membrane fusion protein, HlyD family;
tigrfam_mainrole Protein fate;
tigrfam_name type_I_hlyD;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01843 evalue:1.1e-78 score:264.3 best_domain_score:183.0 name:TIGR01843;
80891 79407 CDS
ID metaerg.pl|03384
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091808.1 1 494 evalue:1.2e-222 qcov:100.00 identity:81.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00082;
pfam_desc Subtilase family;
pfam_id Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:9.1e-51 score:172.1 best_domain_score:171.4 name:Peptidase_S8;
83847 81193 CDS
ID metaerg.pl|03385
allec_ids 7.4.2.5;
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0030256; GO:0016887; GO:0030253; GO:0006508;
allko_ids K02000; K10111; K01996; K06861; K02071; K02045; K02006; K02052; K05847;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091807.1 1 884 evalue:0.0e+00 qcov:100.00 identity:93.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00664; PF00005; PF03412;
pfam_desc ABC transporter transmembrane region; ABC transporter; Peptidase C39 family;
pfam_id ABC_membrane; ABC_tran; Peptidase_C39;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:2.2e-53 score:180.9 best_domain_score:180.5 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:2.6e-35 score:121.1 best_domain_score:120.1 name:ABC_tran; db:Pfam-A.hmm|PF03412.15 evalue:1.6e-10 score:40.1 best_domain_score:39.1 name:Peptidase_C39;
sprot_desc Leukotoxin translocation ATP-binding protein LktB;
sprot_id sp|Q93FH2|LKB13_MANHA;
sprot_target db:uniprot_sprot|sp|Q93FH2|LKB13_MANHA 188 880 evalue:2.4e-151 qcov:78.40 identity:44.20;
tigrfam_acc TIGR01846;
tigrfam_desc type I secretion system ATPase;
tigrfam_mainrole Protein fate;
tigrfam_name type_I_sec_HlyB;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01846 evalue:4.1e-232 score:771.5 best_domain_score:771.2 name:TIGR01846;
tm_num 5;
83847 81193 transmembrane_helix
ID metaerg.pl|03386
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i82186-82254o82297-82365i82516-82584o82594-82662i82840-82908o;
84554 83796 CDS
ID metaerg.pl|03387
allgo_ids GO:0003755;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091806.1 1 252 evalue:4.9e-127 qcov:100.00 identity:95.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00639; PF13145; PF13616;
pfam_desc PPIC-type PPIASE domain; PPIC-type PPIASE domain; PPIC-type PPIASE domain;
pfam_id Rotamase; Rotamase_2; Rotamase_3;
pfam_target db:Pfam-A.hmm|PF00639.21 evalue:2.1e-09 score:37.4 best_domain_score:36.5 name:Rotamase; db:Pfam-A.hmm|PF13145.6 evalue:5e-07 score:29.8 best_domain_score:28.6 name:Rotamase_2; db:Pfam-A.hmm|PF13616.6 evalue:1.1e-05 score:25.1 best_domain_score:23.2 name:Rotamase_3;
85556 84714 CDS
ID metaerg.pl|03388
allgo_ids GO:0016021; GO:0016020; GO:0005886;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198670.1 1 280 evalue:3.2e-127 qcov:100.00 identity:87.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF01940;
pfam_desc Integral membrane protein DUF92;
pfam_id DUF92;
pfam_target db:Pfam-A.hmm|PF01940.16 evalue:3.1e-53 score:179.8 best_domain_score:179.8 name:DUF92;
sprot_desc Uncharacterized membrane protein sll0875;
sprot_id sp|P73555|Y875_SYNY3;
sprot_target db:uniprot_sprot|sp|P73555|Y875_SYNY3 10 265 evalue:9.2e-81 qcov:91.40 identity:66.80;
tigrfam_acc TIGR00297;
tigrfam_desc TIGR00297 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00297;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00297 evalue:1.1e-73 score:246.9 best_domain_score:159.0 name:TIGR00297;
tm_num 5;
85556 84714 transmembrane_helix
ID metaerg.pl|03389
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i84732-84800o84843-84911i84999-85067o85338-85406i85467-85535o;
86241 86672 CDS
ID metaerg.pl|03390
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091804.1 1 143 evalue:6.1e-74 qcov:100.00 identity:93.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00903;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:4e-05 score:23.0 best_domain_score:21.6 name:Glyoxalase;
87270 86602 CDS
ID metaerg.pl|03391
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198668.1 1 222 evalue:3.0e-112 qcov:100.00 identity:90.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00561; PF02230; PF05057; PF12146; PF01674; PF02089; PF07819;
pfam_desc alpha/beta hydrolase fold; Phospholipase/Carboxylesterase; Putative serine esterase (DUF676); Serine aminopeptidase, S33; Lipase (class 2); Palmitoyl protein thioesterase; PGAP1-like protein;
pfam_id Abhydrolase_1; Abhydrolase_2; DUF676; Hydrolase_4; Lipase_2; Palm_thioest; PGAP1;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:7.9e-09 score:34.8 best_domain_score:32.2 name:Abhydrolase_1; db:Pfam-A.hmm|PF02230.16 evalue:2.7e-05 score:23.3 best_domain_score:12.0 name:Abhydrolase_2; db:Pfam-A.hmm|PF05057.14 evalue:7.6e-08 score:31.4 best_domain_score:30.7 name:DUF676; db:Pfam-A.hmm|PF12146.8 evalue:3.5e-08 score:32.2 best_domain_score:29.1 name:Hydrolase_4; db:Pfam-A.hmm|PF01674.18 evalue:2.6e-10 score:39.4 best_domain_score:34.3 name:Lipase_2; db:Pfam-A.hmm|PF02089.15 evalue:2.1e-13 score:49.9 best_domain_score:44.2 name:Palm_thioest; db:Pfam-A.hmm|PF07819.13 evalue:1.5e-09 score:37.2 best_domain_score:36.1 name:PGAP1;
87740 88210 CDS
ID metaerg.pl|03392
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091802.1 1 155 evalue:3.6e-56 qcov:99.40 identity:83.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
89324 88233 CDS
ID metaerg.pl|03393
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091801.1 1 357 evalue:1.2e-171 qcov:98.30 identity:84.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF14559;
pfam_desc Tetratricopeptide repeat;
pfam_id TPR_19;
pfam_target db:Pfam-A.hmm|PF14559.6 evalue:7.6e-09 score:35.2 best_domain_score:28.9 name:TPR_19;
90021 89317 CDS
ID metaerg.pl|03394
allec_ids 2.1.1.193; 2.1.1.-;
allgo_ids GO:0006364; GO:0008168; GO:0005737; GO:0016301; GO:0070042; GO:0070475;
allko_ids K09761;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091800.1 1 232 evalue:2.0e-111 qcov:99.10 identity:88.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id METH-ACETATE-PWY; PWY-5856; PWY-6142; PWY-6154; PWY-6424; UBISYN-PWY; PWY-5855; PWY-5209; PWY-6151; PWY-5857; PWY-6303; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6146; PWY-6427; PWY-6395; PWY-5479; PWY-5987; PWY-6292; CO2FORM-PWY; PWY-5116; PWY-1581; METHIONINE-DEG1-PWY; PWY-5328; PWY-5773; PWY-6519; PWY-5041; PWY-4021; ALL-CHORISMATE-PWY; PWY-3542; PWY-6153; PWY-5467; PWY-6477; PWY-6442; PWY-6575; CODH-PWY; PWYG-321; PWY-5305; PWY-6113; PWY-5729; PWY-1422; PWY-5876; PWY-1061; PWY-5975; PWY-5864;
metacyc_pathway_name methanogenesis from acetate;; ubiquinol-9 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; autoinducer AI-2 biosynthesis II (Vibrio);; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; xanthohumol biosynthesis;; biotin biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; superpathway of chorismate metabolism;; choline biosynthesis II;; autoinducer AI-2 biosynthesis I;; gramine biosynthesis;; gibberellin inactivation II (methylation);; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; mycolate biosynthesis;; bixin biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; vitamin E biosynthesis (tocopherols);; magnoflorine biosynthesis;; homogalacturonan biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;;
metacyc_pathway_type METHANOGENESIS;; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Autoinducer-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; CYSTEINE-SYN; Super-Pathways;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; Super-Pathways;; Choline-Biosynthesis;; Autoinducer-Biosynthesis;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Autotrophic-CO2-Fixation;; Fatty-acid-biosynthesis;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF04452;
pfam_desc RNA methyltransferase;
pfam_id Methyltrans_RNA;
pfam_target db:Pfam-A.hmm|PF04452.14 evalue:1.1e-61 score:207.3 best_domain_score:207.1 name:Methyltrans_RNA;
sprot_desc Ribosomal RNA small subunit methyltransferase E;
sprot_id sp|P72667|RSME_SYNY3;
sprot_target db:uniprot_sprot|sp|P72667|RSME_SYNY3 6 231 evalue:1.0e-56 qcov:96.60 identity:52.40;
tigrfam_acc TIGR00046;
tigrfam_desc RNA methyltransferase, RsmE family;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00046;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00046 evalue:3e-56 score:189.6 best_domain_score:189.3 name:TIGR00046;
91074 90028 CDS
ID metaerg.pl|03395
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093958.1 4 348 evalue:1.2e-168 qcov:99.10 identity:93.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF04087;
pfam_desc Domain of unknown function (DUF389);
pfam_id DUF389;
pfam_target db:Pfam-A.hmm|PF04087.14 evalue:1.9e-37 score:127.7 best_domain_score:127.7 name:DUF389;
tigrfam_acc TIGR00271; TIGR00341;
tigrfam_desc uncharacterized hydrophobic domain; TIGR00341 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00271; TIGR00341;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00271 evalue:3.1e-44 score:149.9 best_domain_score:149.2 name:TIGR00271; db:TIGRFAMs.hmm|TIGR00341 evalue:3.1e-32 score:111.3 best_domain_score:110.8 name:TIGR00341;
tm_num 7;
91074 90028 transmembrane_helix
ID metaerg.pl|03396
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology o90184-90237i90256-90324o90352-90420i90439-90507o90550-90609i90628-90696o90739-90807i;
93180 91261 CDS
ID metaerg.pl|03397
allec_ids 1.8.7.1;
allgo_ids GO:0016491; GO:0020037; GO:0051536; GO:0055114; GO:0051539; GO:0046872; GO:0050311; GO:0016002;
allko_ids K11181; K00441; K00381; K11180; K00366; K00392;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195676.1 1 639 evalue:0.0e+00 qcov:100.00 identity:94.70;
kegg_pathway_id 00633; 00920; 00450; 00910; 00790;
kegg_pathway_name Trinitrotoluene degradation; Sulfur metabolism; Selenoamino acid metabolism; Nitrogen metabolism; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id SULFMETII-PWY;
metacyc_pathway_name assimilatory sulfate reduction II;;
metacyc_pathway_type Assimilatory-Sulfate-Reduction;;
pfam_acc PF01077; PF03460;
pfam_desc Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain;
pfam_id NIR_SIR; NIR_SIR_ferr;
pfam_target db:Pfam-A.hmm|PF01077.22 evalue:8e-61 score:203.4 best_domain_score:171.1 name:NIR_SIR; db:Pfam-A.hmm|PF03460.17 evalue:1.5e-28 score:97.7 best_domain_score:53.1 name:NIR_SIR_ferr;
sprot_desc Sulfite reductase [ferredoxin];
sprot_id sp|P72854|SIR_SYNY3;
sprot_target db:uniprot_sprot|sp|P72854|SIR_SYNY3 8 634 evalue:5.0e-260 qcov:98.10 identity:66.70;
tigrfam_acc TIGR02042;
tigrfam_desc sulfite reductase, ferredoxin dependent;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name sir;
tigrfam_sub1role Sulfur metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR02042 evalue:0 score:1080.5 best_domain_score:1080.2 name:TIGR02042;
93944 93408 CDS
ID metaerg.pl|03398
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091797.1 1 178 evalue:1.7e-86 qcov:100.00 identity:93.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF13505;
pfam_desc Outer membrane protein beta-barrel domain;
pfam_id OMP_b-brl;
pfam_target db:Pfam-A.hmm|PF13505.6 evalue:3.7e-08 score:32.9 best_domain_score:31.9 name:OMP_b-brl;
sp YES;
tm_num 1;
93408 93500 signal_peptide
ID metaerg.pl|03399
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
93944 93408 transmembrane_helix
ID metaerg.pl|03400
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i93426-93494o;
94439 95386 CDS
ID metaerg.pl|03401
allec_ids 3.2.2.24;
allgo_ids GO:0005737; GO:0047407; GO:0046872; GO:0009399; GO:0051725;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091796.1 1 315 evalue:5.6e-173 qcov:100.00 identity:95.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF03747;
pfam_desc ADP-ribosylglycohydrolase;
pfam_id ADP_ribosyl_GH;
pfam_target db:Pfam-A.hmm|PF03747.14 evalue:2e-68 score:230.5 best_domain_score:230.1 name:ADP_ribosyl_GH;
sp YES;
sprot_desc ADP-ribosyl-[dinitrogen reductase] glycohydrolase;
sprot_id sp|P14300|DRAG_RHORU;
sprot_target db:uniprot_sprot|sp|P14300|DRAG_RHORU 6 297 evalue:4.1e-21 qcov:92.70 identity:29.60;
94439 94501 signal_peptide
ID metaerg.pl|03402
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
95956 95630 CDS
ID metaerg.pl|03403
allgo_ids GO:0010038; GO:0005737;
allko_ids K03926;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195673.1 1 108 evalue:1.1e-51 qcov:100.00 identity:99.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF03091;
pfam_desc CutA1 divalent ion tolerance protein;
pfam_id CutA1;
pfam_target db:Pfam-A.hmm|PF03091.15 evalue:4.9e-37 score:125.0 best_domain_score:124.9 name:CutA1;
sprot_desc Divalent-cation tolerance protein CutA;
sprot_id sp|Q7SIA8|CUTA_THET8;
sprot_target db:uniprot_sprot|sp|Q7SIA8|CUTA_THET8 9 104 evalue:6.6e-19 qcov:88.90 identity:48.50;
96963 95962 CDS
ID metaerg.pl|03404
allgo_ids GO:0003700; GO:0006352; GO:0006355;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091794.1 1 333 evalue:3.3e-155 qcov:100.00 identity:92.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF04545;
pfam_desc Sigma-70, region 4;
pfam_id Sigma70_r4;
pfam_target db:Pfam-A.hmm|PF04545.16 evalue:9.8e-06 score:24.2 best_domain_score:22.7 name:Sigma70_r4;
97832 96981 CDS
ID metaerg.pl|03405
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc_B;s__Nostoc_B sp001698435;
genomedb_acc GCA_001698435.1;
genomedb_target db:genomedb|GCA_001698435.1|OCQ89384.1 1 283 evalue:1.6e-131 qcov:100.00 identity:83.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
tm_num 8;
97832 96981 transmembrane_helix
ID metaerg.pl|03406
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i97038-97094o97137-97205i97242-97310o97353-97412i97431-97499o97542-97610i97629-97682o97725-97793i;
98630 97971 CDS
ID metaerg.pl|03407
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091793.1 1 219 evalue:7.0e-114 qcov:100.00 identity:94.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
98990 99064 tRNA
ID metaerg.pl|03408
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
name tRNA_Arg_tct;
100335 99235 CDS
ID metaerg.pl|03409
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
sp YES;
tm_num 2;
99235 99300 signal_peptide
ID metaerg.pl|03410
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
100335 99235 transmembrane_helix
ID metaerg.pl|03411
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology o99244-99312i99712-99780o;
101147 101076 tRNA
ID metaerg.pl|03412
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
name tRNA_Thr_ggt;
101322 101237 tRNA
ID metaerg.pl|03413
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
name tRNA_Tyr_gta;
103239 101419 CDS
ID metaerg.pl|03414
allec_ids 7.5.2.6;
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887; GO:0034040;
allko_ids K02000; K02023; K01995; K02049; K10111; K02045; K11072; K02071; K06861; K01996; K02017; K05847; K02006; K02052; K11085;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090982.1 1 606 evalue:0.0e+00 qcov:100.00 identity:92.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:8e-24 score:84.0 best_domain_score:83.4 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:6e-33 score:113.5 best_domain_score:112.4 name:ABC_tran;
sprot_desc Lipid A export ATP-binding/permease protein MsbA;
sprot_id sp|Q2SIN5|MSBA_HAHCH;
sprot_target db:uniprot_sprot|sp|Q2SIN5|MSBA_HAHCH 121 599 evalue:2.6e-72 qcov:79.00 identity:35.70;
tm_num 3;
103239 101419 transmembrane_helix
ID metaerg.pl|03415
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i101644-101712o101923-101991i102232-102300o;
104111 103332 CDS
ID metaerg.pl|03416
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195667.1 1 259 evalue:4.9e-122 qcov:100.00 identity:86.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
sp YES;
tm_num 1;
103332 103409 signal_peptide
ID metaerg.pl|03417
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
104111 103332 transmembrane_helix
ID metaerg.pl|03418
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i103350-103409o;
104630 104223 CDS
ID metaerg.pl|03419
allgo_ids GO:0006826;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090984.1 1 135 evalue:9.5e-69 qcov:100.00 identity:95.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF06228; PF05171;
pfam_desc Haem utilisation ChuX/HutX; Haemin-degrading HemS.ChuX domain;
pfam_id ChuX_HutX; HemS;
pfam_target db:Pfam-A.hmm|PF06228.13 evalue:6.8e-12 score:44.5 best_domain_score:44.4 name:ChuX_HutX; db:Pfam-A.hmm|PF05171.12 evalue:1.1e-06 score:27.9 best_domain_score:27.7 name:HemS;
105695 104742 CDS
ID metaerg.pl|03420
allgo_ids GO:0005524; GO:0005829;
allko_ids K06217;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090985.1 1 317 evalue:5.5e-168 qcov:100.00 identity:97.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF13245; PF13401; PF13604; PF02562;
pfam_desc AAA domain; AAA domain; AAA domain; PhoH-like protein;
pfam_id AAA_19; AAA_22; AAA_30; PhoH;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:4.1e-07 score:29.7 best_domain_score:26.0 name:AAA_19; db:Pfam-A.hmm|PF13401.6 evalue:1.4e-06 score:27.9 best_domain_score:23.0 name:AAA_22; db:Pfam-A.hmm|PF13604.6 evalue:1.1e-08 score:34.3 best_domain_score:33.2 name:AAA_30; db:Pfam-A.hmm|PF02562.16 evalue:4.9e-95 score:316.0 best_domain_score:315.2 name:PhoH;
sprot_desc PhoH-like protein;
sprot_id sp|P73090|PHOL_SYNY3;
sprot_target db:uniprot_sprot|sp|P73090|PHOL_SYNY3 7 316 evalue:6.4e-115 qcov:97.80 identity:68.10;
106344 105910 CDS
ID metaerg.pl|03421
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc linckia_A;
genomedb_acc GCF_002608075.1;
genomedb_target db:genomedb|GCF_002608075.1|WP_099071904.1 1 143 evalue:3.6e-50 qcov:99.30 identity:73.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF13083;
pfam_desc KH domain;
pfam_id KH_4;
pfam_target db:Pfam-A.hmm|PF13083.6 evalue:1.9e-17 score:62.1 best_domain_score:61.6 name:KH_4;
106567 106307 CDS
ID metaerg.pl|03422
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02959;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090987.1 1 86 evalue:3.6e-37 qcov:100.00 identity:96.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00886;
pfam_desc Ribosomal protein S16;
pfam_id Ribosomal_S16;
pfam_target db:Pfam-A.hmm|PF00886.19 evalue:2.8e-18 score:65.0 best_domain_score:64.7 name:Ribosomal_S16;
sprot_desc 30S ribosomal protein S16;
sprot_id sp|B2IVK6|RS16_NOSP7;
sprot_target db:uniprot_sprot|sp|B2IVK6|RS16_NOSP7 1 86 evalue:2.9e-38 qcov:100.00 identity:94.20;
tigrfam_acc TIGR00002;
tigrfam_desc ribosomal protein bS16;
tigrfam_mainrole Protein synthesis;
tigrfam_name S16;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00002 evalue:6.8e-30 score:102.1 best_domain_score:101.9 name:TIGR00002;
108431 106965 CDS
ID metaerg.pl|03423
allgo_ids GO:0005525; GO:0006614; GO:0048500; GO:0008312; GO:0003924;
allko_ids K03106;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090988.1 1 488 evalue:3.8e-261 qcov:100.00 identity:97.50;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF00448; PF02881; PF02978; PF06414;
pfam_desc SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; Zeta toxin;
pfam_id SRP54; SRP54_N; SRP_SPB; Zeta_toxin;
pfam_target db:Pfam-A.hmm|PF00448.22 evalue:3.2e-75 score:251.3 best_domain_score:250.7 name:SRP54; db:Pfam-A.hmm|PF02881.19 evalue:3.1e-22 score:77.8 best_domain_score:76.1 name:SRP54_N; db:Pfam-A.hmm|PF02978.19 evalue:2e-30 score:104.5 best_domain_score:98.5 name:SRP_SPB; db:Pfam-A.hmm|PF06414.12 evalue:9.6e-06 score:24.2 best_domain_score:23.2 name:Zeta_toxin;
sprot_desc Signal recognition particle protein;
sprot_id sp|P74214|SRP54_SYNY3;
sprot_target db:uniprot_sprot|sp|P74214|SRP54_SYNY3 1 424 evalue:7.9e-181 qcov:86.90 identity:76.70;
tigrfam_acc TIGR00959;
tigrfam_desc signal recognition particle protein;
tigrfam_mainrole Protein fate;
tigrfam_name ffh;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00959 evalue:1.1e-182 score:606.8 best_domain_score:606.6 name:TIGR00959;
109189 108758 CDS
ID metaerg.pl|03424
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Elainellales;f__Elainellaceae;g__Elainella;s__Elainella sp000733415;
genomedb_acc GCF_000733415.1;
genomedb_target db:genomedb|GCF_000733415.1|WP_035999930.1 1 138 evalue:3.8e-36 qcov:96.50 identity:55.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
109513 110580 CDS
ID metaerg.pl|03425
allec_ids 4.1.2.13;
allgo_ids GO:0004332; GO:0006096; GO:0005829; GO:0030388;
allko_ids K01623;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Gloeocapsaceae;g__Gloeocapsa;s__Gloeocapsa sp000332035;
genomedb_acc GCF_000332035.1;
genomedb_target db:genomedb|GCF_000332035.1|WP_006527803.1 10 355 evalue:3.3e-161 qcov:97.50 identity:81.80;
kegg_pathway_id 00010; 00710; 00051; 00030;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Fructose and mannose metabolism; Pentose phosphate pathway;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id PWY-1861; ANAGLYCOLYSIS-PWY; PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-1042; ANAEROFRUCAT-PWY; PWY-3801; P441-PWY; CALVIN-PWY; P341-PWY; PWY-6142; PWY66-373; P461-PWY; PWY-5484; P185-PWY; PHOTOALL-PWY; GLUCONEO-PWY; GLYCOLYSIS; GLYCOLYSIS-E-D; PWY-6146;
metacyc_pathway_name formaldehyde assimilation II (assimilatory RuMP Cycle);; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis IV (plant cytosol);; homolactic fermentation;; sucrose degradation II (sucrose synthase);; superpathway of N-acetylneuraminate degradation;; Calvin-Benson-Bassham cycle;; glycolysis V (Pyrococcus);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; sucrose degradation V (sucrose α-glucosidase);; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; formaldehyde assimilation III (dihydroxyacetone cycle);; oxygenic photosynthesis;; gluconeogenesis I;; glycolysis I (from glucose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;; Methanobacterium thermoautotrophicum biosynthetic metabolism;;
metacyc_pathway_type Formaldehyde-Assimilation;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; SUCROSE-DEG;; CARBOXYLATES-DEG; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis; Super-Pathways;; SUCROSE-DEG;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Formaldehyde-Assimilation;; Photosynthesis; Super-Pathways;; Gluconeogenesis;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Biosynthesis; Super-Pathways;;
pfam_acc PF00274;
pfam_desc Fructose-bisphosphate aldolase class-I;
pfam_id Glycolytic;
pfam_target db:Pfam-A.hmm|PF00274.19 evalue:5.7e-135 score:448.8 best_domain_score:448.5 name:Glycolytic;
sprot_desc Probable fructose-bisphosphate aldolase class 1;
sprot_id sp|Q8P5Z7|ALF1_XANCP;
sprot_target db:uniprot_sprot|sp|Q8P5Z7|ALF1_XANCP 15 344 evalue:1.2e-106 qcov:93.00 identity:59.50;
110704 110886 CDS
ID metaerg.pl|03426
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Rivularia;s__Rivularia sp002361335;
genomedb_acc GCA_002361335.1;
genomedb_target db:genomedb|GCA_002361335.1|DESS01000341.1_6 1 57 evalue:5.4e-16 qcov:95.00 identity:68.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
111020 112033 CDS
ID metaerg.pl|03427
allgo_ids GO:0003700; GO:0006355; GO:0043565;
allko_ids K00567; K10778;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp000316645;
genomedb_acc GCF_000316645.1;
genomedb_target db:genomedb|GCF_000316645.1|WP_015139522.1 1 337 evalue:2.4e-121 qcov:100.00 identity:65.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF12833; PF00165;
pfam_desc Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF12833.7 evalue:2.9e-18 score:65.2 best_domain_score:64.4 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:6.7e-09 score:34.9 best_domain_score:24.6 name:HTH_AraC;
112197 114776 CDS
ID metaerg.pl|03428
allgo_ids GO:0009279; GO:0016021; GO:0005506; GO:0015344; GO:0038023; GO:0015675; GO:0006829;
allko_ids K02014;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chroococcidiopsidaceae;g__Chroogloeocystis;s__Chroogloeocystis sp002964865;
genomedb_acc GCF_002964865.1;
genomedb_target db:genomedb|GCF_002964865.1|WP_105218793.1 62 859 evalue:0.0e+00 qcov:92.90 identity:83.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF11741; PF07715; PF00593;
pfam_desc AMIN domain; TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id AMIN; Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF11741.8 evalue:2.9e-17 score:61.8 best_domain_score:60.4 name:AMIN; db:Pfam-A.hmm|PF07715.15 evalue:4e-20 score:71.6 best_domain_score:70.1 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:1.4e-69 score:235.4 best_domain_score:234.8 name:TonB_dep_Rec;
sp YES;
sprot_desc Metal-pseudopaline receptor CntO;
sprot_id sp|Q9HUX3|CNTO_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HUX3|CNTO_PSEAE 195 859 evalue:7.3e-105 qcov:77.40 identity:34.40;
tigrfam_acc TIGR01783;
tigrfam_desc TonB-dependent siderophore receptor;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TonB-siderophor;
tigrfam_sub1role Porins;
tigrfam_target db:TIGRFAMs.hmm|TIGR01783 evalue:3.4e-160 score:533.9 best_domain_score:533.7 name:TIGR01783;
112197 112274 signal_peptide
ID metaerg.pl|03429
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
114818 115771 CDS
ID metaerg.pl|03430
allgo_ids GO:0030288; GO:0005886;
allko_ids K02016;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093456.1 1 317 evalue:5.2e-102 qcov:100.00 identity:61.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
pfam_acc PF01497;
pfam_desc Periplasmic binding protein;
pfam_id Peripla_BP_2;
pfam_target db:Pfam-A.hmm|PF01497.18 evalue:1.3e-29 score:102.7 best_domain_score:102.4 name:Peripla_BP_2;
sp YES;
sprot_desc Putative ABC transporter substrate-binding lipoprotein YhfQ;
sprot_id sp|C0SP94|YHFQ_BACSU;
sprot_target db:uniprot_sprot|sp|C0SP94|YHFQ_BACSU 46 312 evalue:1.5e-18 qcov:84.20 identity:28.90;
tm_num 1;
114818 114886 lipoprotein_signal_peptide
ID metaerg.pl|03431
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
114818 115771 transmembrane_helix
ID metaerg.pl|03432
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
topology i114836-114904o;
116351 115872 CDS
ID metaerg.pl|03433
allec_ids 2.3.1.-;
allgo_ids GO:0016747; GO:0005737; GO:0008080;
allko_ids K03830; K06957;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp002246015;
genomedb_acc GCF_002246015.1;
genomedb_target db:genomedb|GCF_002246015.1|WP_094349085.1 5 159 evalue:2.2e-56 qcov:97.50 identity:71.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.8012; 0.0141306; 0.00230633; 72.7616; 0.0231579;
metacyc_pathway_id P3-PWY; PWY-6515; PWY-6295; ECASYN-PWY; PWY-5284; PWY-84; PWY-6438; THREOCAT-PWY; PWY-5140; PWY-5987; PWY-6411; PWY0-881; PWY-5268; PWY-6404; PWY-6316; CENTBENZCOA-PWY; PWY-5313; PWY-5400; PWY-5965; PWY-5209; PWY-6412; PWY-5393; KDO-LIPASYN-PWY; PWY-6318; PWY-5307; PWY-5972; PWY-5405; PWY-5981; PWY-5437; PWY-5477; PWY1A0-6325; PWY-6432; LPSSYN-PWY; PWY-6113; FASYN-INITIAL-PWY; PWYG-321; PWY-6413; PWY-6442; PWY-6312; PWY-6418; PWY-6397; PWY1-3; KDO-NAGLIPASYN-PWY; PWY-5184; BENZCOA-PWY; PWY-4801; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5139; PWY-6310; PWY-5080;
metacyc_pathway_name gallate degradation III (anaerobic);; phloridzin biosynthesis;; ; enterobacterial common antigen biosynthesis;; shisonin biosynthesis;; resveratrol biosynthesis;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; cannabinoid biosynthesis;; sorgoleone biosynthesis;; ginsenoside degradation I;; superpathway of fatty acid biosynthesis I (E. coli);; salvianin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; aromatic polyketides biosynthesis;; benzoyl-CoA degradation II (anaerobic);; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; amaranthin biosynthesis;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; ginsenoside degradation II;; raspberry ketone biosynthesis;; (Kdo)2-lipid A biosynthesis I;; L-phenylalanine degradation IV (mammalian, via side chain);; gentiodelphin biosynthesis;; stearate biosynthesis I (animals and fungi);; superpathway of betalain biosynthesis;; CDP-diacylglycerol biosynthesis III;; L-threonine degradation I;; gallotannin biosynthesis;; actinorhodin biosynthesis;; curcuminoid biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; ginsenoside degradation III;; spermidine hydroxycinnamic acid conjugates biosynthesis;; barbaloin biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; superpathway of (Kdo)2-lipid A biosynthesis;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; aloesone biosynthesis I;; sophorolipid biosynthesis;; pelargonidin conjugates biosynthesis;; aloesone biosynthesis II;; very long chain fatty acid biosynthesis I;;
metacyc_pathway_type GALLATE-DEG;; FLAVONOID-SYN;; ; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Ginsenoside-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Benzoyl-CoA-Degradation;; ANTHOCYANIN-SYN; Super-Pathways;; BETALAIN-ALKALOIDS;; Fatty-acid-biosynthesis;; METHANOGENESIS;; Ginsenoside-Degradation;; POLYKETIDE-SYN;; Lipid-Biosynthesis;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; Stearate-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; THREONINE-DEG;; GALLOTANNINS;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; TERPENOID-DEG;; N-CONTAINING-SECONDARY-CMPD-SYN;; POLYKETIDE-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; Cell-Wall-Biosynthesis;; Storage-Compounds-Biosynthesis;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; POLYKETIDE-SYN;; Lipid-Biosynthesis;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Fatty-acid-biosynthesis;;
pfam_acc PF00583; PF13673; PF13302; PF13420; PF13508; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_3; Acetyltransf_4; Acetyltransf_7; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:5.3e-17 score:61.4 best_domain_score:61.1 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:1.6e-10 score:40.2 best_domain_score:39.6 name:Acetyltransf_10; db:Pfam-A.hmm|PF13302.7 evalue:2.6e-07 score:30.6 best_domain_score:30.2 name:Acetyltransf_3; db:Pfam-A.hmm|PF13420.7 evalue:2.2e-10 score:40.1 best_domain_score:39.8 name:Acetyltransf_4; db:Pfam-A.hmm|PF13508.7 evalue:1.6e-10 score:40.5 best_domain_score:39.9 name:Acetyltransf_7; db:Pfam-A.hmm|PF08445.10 evalue:2e-05 score:23.7 best_domain_score:22.8 name:FR47;
sprot_desc Uncharacterized N-acetyltransferase MJ1207;
sprot_id sp|Q58604|Y1207_METJA;
sprot_target db:uniprot_sprot|sp|Q58604|Y1207_METJA 1 148 evalue:3.2e-06 qcov:93.10 identity:28.40;
>Feature NODE_18_length_116309_cov_15.0601
3 1415 CDS
ID metaerg.pl|03434
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Dermatophilaceae;g__Serinicoccus;s__Serinicoccus chungangensis;
genomedb_acc GCF_001483745.1;
genomedb_target db:genomedb|GCF_001483745.1|WP_058891395.1 53 445 evalue:1.1e-74 qcov:83.60 identity:42.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00089; PF13365;
pfam_desc Trypsin; Trypsin-like peptidase domain;
pfam_id Trypsin; Trypsin_2;
pfam_target db:Pfam-A.hmm|PF00089.26 evalue:4.1e-05 score:22.7 best_domain_score:21.6 name:Trypsin; db:Pfam-A.hmm|PF13365.6 evalue:2.2e-17 score:63.6 best_domain_score:62.9 name:Trypsin_2;
sp YES;
tm_num 1;
3 113 signal_peptide
ID metaerg.pl|03435
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
3 1415 transmembrane_helix
ID metaerg.pl|03436
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i51-119o;
1412 1966 CDS
ID metaerg.pl|03437
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax sp002354605;
genomedb_acc GCA_002354605.1;
genomedb_target db:genomedb|GCA_002354605.1|DELX01000014.1_7 16 184 evalue:6.4e-60 qcov:91.80 identity:70.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01661;
pfam_desc Macro domain;
pfam_id Macro;
pfam_target db:Pfam-A.hmm|PF01661.21 evalue:1.4e-34 score:117.9 best_domain_score:117.6 name:Macro;
sprot_desc Macro domain-containing protein CT2219;
sprot_id sp|Q8KAE4|Y2219_CHLTE;
sprot_target db:uniprot_sprot|sp|Q8KAE4|Y2219_CHLTE 14 180 evalue:1.4e-29 qcov:90.80 identity:45.20;
3231 2050 CDS
ID metaerg.pl|03438
allec_ids 3.5.1.16;
allgo_ids GO:0016787; GO:0005737; GO:0008777; GO:0008237; GO:0008270; GO:0006526;
allko_ids K01270; K01438;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442036.1 12 390 evalue:3.6e-137 qcov:96.40 identity:67.50;
kegg_pathway_id 00480; 00220; 00252; 00410; 00340;
kegg_pathway_name Glutathione metabolism; Urea cycle and metabolism of amino groups; Alanine and aspartate metabolism; beta-Alanine metabolism; Histidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id GLUTORN-PWY; ARG+POLYAMINE-SYN; PWY-5154; ARGSYN-PWY;
metacyc_pathway_name L-ornithine biosynthesis I;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type L-Ornithine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:8.6e-22 score:76.4 best_domain_score:75.6 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:1.3e-35 score:122.2 best_domain_score:119.7 name:Peptidase_M20;
sprot_desc Acetylornithine deacetylase;
sprot_id sp|Q7MYD5|ARGE_PHOLL;
sprot_target db:uniprot_sprot|sp|Q7MYD5|ARGE_PHOLL 18 388 evalue:2.8e-43 qcov:94.40 identity:31.40;
tigrfam_acc TIGR01892;
tigrfam_desc acetylornithine deacetylase (ArgE);
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name AcOrn-deacetyl;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01892 evalue:8.2e-113 score:376.3 best_domain_score:376.1 name:TIGR01892;
3253 3450 CDS
ID metaerg.pl|03439
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
3469 3666 CDS
ID metaerg.pl|03440
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__Bin125;f__Bin125;g__TK10-74A;s__TK10-74A sp003228175;
genomedb_acc GCA_003228175.2;
genomedb_target db:genomedb|GCA_003228175.2|PZC49894.1 1 61 evalue:1.5e-08 qcov:93.80 identity:47.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
3693 4832 CDS
ID metaerg.pl|03441
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Ga0077560;f__Ga0077560;g__Ga0077560;s__Ga0077560 sp001464275;
genomedb_acc GCA_001464275.1;
genomedb_target db:genomedb|GCA_001464275.1|LNFL01000162.1_24 1 379 evalue:4.8e-78 qcov:100.00 identity:43.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00561; PF07859; PF12697; PF12146; PF03583; PF00326;
pfam_desc alpha/beta hydrolase fold; alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33; Secretory lipase ; Prolyl oligopeptidase family;
pfam_id Abhydrolase_1; Abhydrolase_3; Abhydrolase_6; Hydrolase_4; LIP; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:2.3e-07 score:30.0 best_domain_score:19.7 name:Abhydrolase_1; db:Pfam-A.hmm|PF07859.13 evalue:6e-05 score:22.2 best_domain_score:15.6 name:Abhydrolase_3; db:Pfam-A.hmm|PF12697.7 evalue:6.9e-11 score:42.4 best_domain_score:42.4 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:2.4e-11 score:42.6 best_domain_score:39.3 name:Hydrolase_4; db:Pfam-A.hmm|PF03583.14 evalue:8.5e-30 score:103.3 best_domain_score:100.1 name:LIP; db:Pfam-A.hmm|PF00326.21 evalue:5.2e-06 score:25.3 best_domain_score:13.1 name:Peptidase_S9;
sp YES;
3693 3737 signal_peptide
ID metaerg.pl|03442
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
5390 4878 CDS
ID metaerg.pl|03443
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669001.1 1 167 evalue:4.9e-54 qcov:98.20 identity:67.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00132; PF14602;
pfam_desc Bacterial transferase hexapeptide (six repeats); Hexapeptide repeat of succinyl-transferase;
pfam_id Hexapep; Hexapep_2;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:4.2e-15 score:54.0 best_domain_score:30.8 name:Hexapep; db:Pfam-A.hmm|PF14602.6 evalue:2.2e-07 score:29.7 best_domain_score:23.2 name:Hexapep_2;
5600 7894 CDS
ID metaerg.pl|03444
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669107.1 9 760 evalue:3.7e-178 qcov:98.40 identity:50.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF09826;
pfam_desc Beta propeller domain;
pfam_id Beta_propel;
pfam_target db:Pfam-A.hmm|PF09826.9 evalue:4.7e-130 score:434.1 best_domain_score:426.3 name:Beta_propel;
sp YES;
5600 5659 lipoprotein_signal_peptide
ID metaerg.pl|03445
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
8014 8883 CDS
ID metaerg.pl|03446
allgo_ids GO:0042128;
allko_ids K00360; K02016; K05301; K00387;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668310.1 8 287 evalue:5.7e-87 qcov:96.90 identity:60.40;
kegg_pathway_id 02010; 00920; 00910;
kegg_pathway_name ABC transporters - General; Sulfur metabolism; Nitrogen metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00174;
pfam_desc Oxidoreductase molybdopterin binding domain;
pfam_id Oxidored_molyb;
pfam_target db:Pfam-A.hmm|PF00174.19 evalue:1.7e-37 score:127.9 best_domain_score:127.4 name:Oxidored_molyb;
8906 9295 CDS
ID metaerg.pl|03447
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Marinactinospora;s__Marinactinospora thermotolerans;
genomedb_acc GCF_900167435.1;
genomedb_target db:genomedb|GCF_900167435.1|WP_078762945.1 6 128 evalue:2.3e-11 qcov:95.30 identity:37.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF09969;
pfam_desc Uncharacterized conserved protein (DUF2203);
pfam_id DUF2203;
pfam_target db:Pfam-A.hmm|PF09969.9 evalue:2e-23 score:82.7 best_domain_score:82.4 name:DUF2203;
10008 9328 CDS
ID metaerg.pl|03448
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
tm_num 3;
10008 9328 transmembrane_helix
ID metaerg.pl|03449
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology o9490-9558i9577-9645o9922-9990i;
10385 10005 CDS
ID metaerg.pl|03450
allec_ids 4.1.1.11;
allgo_ids GO:0004068; GO:0006523; GO:0005737; GO:0015940;
allko_ids K01579;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665492.1 1 124 evalue:3.0e-48 qcov:98.40 identity:80.80;
kegg_pathway_id 00252; 00410;
kegg_pathway_name Alanine and aspartate metabolism; beta-Alanine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id PANTOSYN-PWY; PWY-5155;
metacyc_pathway_name superpathway of coenzyme A biosynthesis I (bacteria);; β-alanine biosynthesis III;;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; Beta-Alanine-Biosynthesis;;
pfam_acc PF02261;
pfam_desc Aspartate decarboxylase;
pfam_id Asp_decarbox;
pfam_target db:Pfam-A.hmm|PF02261.16 evalue:2.7e-54 score:181.2 best_domain_score:181.1 name:Asp_decarbox;
sprot_desc Aspartate 1-decarboxylase;
sprot_id sp|A1SDW8|PAND_NOCSJ;
sprot_target db:uniprot_sprot|sp|A1SDW8|PAND_NOCSJ 1 126 evalue:2.6e-43 qcov:100.00 identity:69.80;
tigrfam_acc TIGR00223;
tigrfam_desc aspartate 1-decarboxylase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name panD;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00223 evalue:1e-52 score:176.5 best_domain_score:176.3 name:TIGR00223;
10826 12016 CDS
ID metaerg.pl|03451
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__Bog-473;s__Bog-473 sp003160635;
genomedb_acc GCA_003160635.1;
genomedb_target db:genomedb|GCA_003160635.1|PMLV01000077.1_58 10 379 evalue:7.0e-88 qcov:93.40 identity:50.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:5.7e-14 score:52.3 best_domain_score:51.6 name:Metallophos;
12013 14658 CDS
ID metaerg.pl|03452
genomedb_OC d__Bacteria;p__Dormibacterota;c__Dormibacteria;o__Dormibacterales;f__Dormibacteraceae;g__Palsa-870;s__Palsa-870 sp003151935;
genomedb_acc GCA_003151935.1;
genomedb_target db:genomedb|GCA_003151935.1|PLYZ01000062.1_22 1 874 evalue:1.4e-91 qcov:99.20 identity:34.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF13476; PF13514;
pfam_desc AAA domain; AAA domain;
pfam_id AAA_23; AAA_27;
pfam_target db:Pfam-A.hmm|PF13476.6 evalue:4.2e-08 score:33.2 best_domain_score:30.4 name:AAA_23; db:Pfam-A.hmm|PF13514.6 evalue:9.3e-06 score:24.6 best_domain_score:24.6 name:AAA_27;
sprot_desc hypothetical protein;
sprot_id sp|P9WM40|Y1278_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WM40|Y1278_MYCTO 1 874 evalue:2.8e-51 qcov:99.20 identity:32.90;
16777 14669 CDS
ID metaerg.pl|03453
allgo_ids GO:0003723; GO:0004540;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669114.1 1 701 evalue:1.9e-245 qcov:99.90 identity:63.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00773;
pfam_desc RNB domain;
pfam_id RNB;
pfam_target db:Pfam-A.hmm|PF00773.19 evalue:2.2e-64 score:217.1 best_domain_score:216.8 name:RNB;
17543 16914 CDS
ID metaerg.pl|03454
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
17767 19131 CDS
ID metaerg.pl|03455
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__OPB41;f__PHET01;g__PHET01;s__PHET01 sp002841275;
genomedb_acc GCA_002841275.1;
genomedb_target db:genomedb|GCA_002841275.1|PKQ15001.1 18 379 evalue:1.7e-58 qcov:79.70 identity:38.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
tm_num 2;
17767 19131 transmembrane_helix
ID metaerg.pl|03456
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i18115-18168o18211-18279i;
19452 19216 CDS
ID metaerg.pl|03457
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
sp YES;
19216 19284 lipoprotein_signal_peptide
ID metaerg.pl|03458
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
20566 19631 CDS
ID metaerg.pl|03459
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441874.1 6 300 evalue:5.8e-37 qcov:94.90 identity:39.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00226;
pfam_desc DnaJ domain;
pfam_id DnaJ;
pfam_target db:Pfam-A.hmm|PF00226.31 evalue:1.8e-08 score:33.6 best_domain_score:32.9 name:DnaJ;
21647 20610 CDS
ID metaerg.pl|03460
allec_ids 3.5.1.-;
allgo_ids GO:0047609; GO:0047611; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium;s__Methylobacterium sp000019365;
genomedb_acc GCF_000019365.1;
genomedb_target db:genomedb|GCF_000019365.1|WP_012330651.1 7 341 evalue:4.9e-77 qcov:97.10 identity:48.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id PWY-0; PWY-6548; PWY-1822; PWY-5327; LYSDEGII-PWY; PWY-5784;
metacyc_pathway_name putrescine degradation III;; ; indole-3-acetate activation I;; superpathway of L-lysine degradation;; L-lysine degradation III;; indole-3-acetate inactivation VIII;;
metacyc_pathway_type Putrescine-Degradation;; ; Activation;; LYSINE-DEG; Super-Pathways;; LYSINE-DEG;; Indole-3-Acetate-Inactivation;;
pfam_acc PF00850;
pfam_desc Histone deacetylase domain;
pfam_id Hist_deacetyl;
pfam_target db:Pfam-A.hmm|PF00850.19 evalue:6.7e-65 score:218.8 best_domain_score:218.5 name:Hist_deacetyl;
sprot_desc Acetylpolyamine amidohydrolase;
sprot_id sp|Q48935|APAH_MYCRA;
sprot_target db:uniprot_sprot|sp|Q48935|APAH_MYCRA 6 342 evalue:2.1e-63 qcov:97.70 identity:41.50;
21922 22854 CDS
ID metaerg.pl|03461
allgo_ids GO:0005524; GO:0005886; GO:0016887;
allko_ids K02017; K09817; K02006; K02052; K02045; K06861; K02071; K01996; K02013; K01995; K02049; K10111; K02023; K19973;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441329.1 18 287 evalue:1.7e-76 qcov:87.10 identity:59.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:8.9e-14 score:51.2 best_domain_score:37.5 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.4e-28 score:99.4 best_domain_score:99.0 name:ABC_tran;
sprot_desc Manganese transport system ATP-binding protein MntB;
sprot_id sp|Q9KD30|MNTB_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KD30|MNTB_BACHD 31 278 evalue:3.0e-40 qcov:80.00 identity:37.50;
22845 23831 CDS
ID metaerg.pl|03462
allgo_ids GO:0005887; GO:0042626; GO:0043190; GO:0055085;
allko_ids K19976;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441328.1 4 280 evalue:3.2e-78 qcov:84.50 identity:62.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00950;
pfam_desc ABC 3 transport family;
pfam_id ABC-3;
pfam_target db:Pfam-A.hmm|PF00950.17 evalue:3e-66 score:222.8 best_domain_score:222.6 name:ABC-3;
sprot_desc Manganese transport system membrane protein MntC;
sprot_id sp|Q92AG0|MNTC_LISIN;
sprot_target db:uniprot_sprot|sp|Q92AG0|MNTC_LISIN 12 265 evalue:4.6e-23 qcov:77.40 identity:27.60;
tm_num 9;
22845 23831 transmembrane_helix
ID metaerg.pl|03463
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology o22887-22955i22974-23033o23043-23090i23127-23195o23253-23321i23358-23426o23439-23492i23505-23573o23601-23669i;
23952 25109 CDS
ID metaerg.pl|03464
allgo_ids GO:0030001; GO:0046872; GO:0005886; GO:0007155;
allko_ids K09815; K19975;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665512.1 9 385 evalue:8.9e-88 qcov:97.90 identity:53.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01297;
pfam_desc Zinc-uptake complex component A periplasmic;
pfam_id ZnuA;
pfam_target db:Pfam-A.hmm|PF01297.17 evalue:3.6e-66 score:222.4 best_domain_score:222.2 name:ZnuA;
sp YES;
sprot_desc Manganese-binding lipoprotein MntA;
sprot_id sp|Q9KFG3|MNTA_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KFG3|MNTA_BACHD 76 372 evalue:2.3e-29 qcov:77.10 identity:28.30;
23952 24005 lipoprotein_signal_peptide
ID metaerg.pl|03465
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
25883 25158 CDS
ID metaerg.pl|03466
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
tm_num 1;
25883 25158 transmembrane_helix
ID metaerg.pl|03467
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i25449-25508o;
26323 25880 CDS
ID metaerg.pl|03468
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442285.1 12 143 evalue:1.8e-17 qcov:89.80 identity:47.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF07332;
pfam_desc Putative Actinobacterial Holin-X, holin superfamily III;
pfam_id Phage_holin_3_6;
pfam_target db:Pfam-A.hmm|PF07332.11 evalue:2.2e-23 score:81.7 best_domain_score:81.5 name:Phage_holin_3_6;
tm_num 2;
26323 25880 transmembrane_helix
ID metaerg.pl|03469
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i26051-26119o26162-26230i;
26583 27770 CDS
ID metaerg.pl|03470
allgo_ids GO:0003677; GO:0006355; GO:0045892;
allko_ids K03705;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441872.1 28 394 evalue:2.9e-134 qcov:92.90 identity:72.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01628;
pfam_desc HrcA protein C terminal domain;
pfam_id HrcA;
pfam_target db:Pfam-A.hmm|PF01628.21 evalue:1.3e-48 score:165.1 best_domain_score:164.6 name:HrcA;
sprot_desc Heat-inducible transcription repressor HrcA;
sprot_id sp|Q5YZX1|HRCA_NOCFA;
sprot_target db:uniprot_sprot|sp|Q5YZX1|HRCA_NOCFA 59 392 evalue:1.4e-63 qcov:84.60 identity:42.60;
tigrfam_acc TIGR00331;
tigrfam_desc heat-inducible transcription repressor HrcA;
tigrfam_mainrole Regulatory functions;
tigrfam_name hrcA;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00331 evalue:2.5e-83 score:279.6 best_domain_score:279.4 name:TIGR00331;
27832 28959 CDS
ID metaerg.pl|03471
allgo_ids GO:0031072; GO:0051082; GO:0005737; GO:0005524; GO:0008270; GO:0006260; GO:0006457; GO:0009408;
allko_ids K00428; K03686;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668396.1 1 374 evalue:2.2e-144 qcov:99.70 identity:72.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00226; PF01556; PF00684;
pfam_desc DnaJ domain; DnaJ C terminal domain; DnaJ central domain;
pfam_id DnaJ; DnaJ_C; DnaJ_CXXCXGXG;
pfam_target db:Pfam-A.hmm|PF00226.31 evalue:5.7e-20 score:70.5 best_domain_score:69.9 name:DnaJ; db:Pfam-A.hmm|PF01556.18 evalue:3.2e-34 score:117.4 best_domain_score:117.0 name:DnaJ_C; db:Pfam-A.hmm|PF00684.19 evalue:2.9e-10 score:39.6 best_domain_score:38.9 name:DnaJ_CXXCXGXG;
sprot_desc Chaperone protein DnaJ;
sprot_id sp|Q6AEC0|DNAJ_LEIXX;
sprot_target db:uniprot_sprot|sp|Q6AEC0|DNAJ_LEIXX 1 373 evalue:8.0e-56 qcov:99.50 identity:39.80;
28970 29713 CDS
ID metaerg.pl|03472
allec_ids 2.1.1.193; 2.1.1.-;
allgo_ids GO:0006364; GO:0008168; GO:0005737; GO:0016301; GO:0070042; GO:0070475;
allko_ids K09761;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441871.1 1 247 evalue:9.5e-59 qcov:100.00 identity:57.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id PWY-6477; PWY-5467; PWY-6575; PWY-6442; CODH-PWY; PWY-4021; PWY-5041; PWY-6153; PWY-3542; ALL-CHORISMATE-PWY; PWY-1061; PWY-5876; PWY-5864; PWY-5975; PWY-6113; PWY-5729; PWY-5305; PWYG-321; PWY-1422; PWY-5855; PWY-5209; PWY-6151; PWY-5857; PWY-6303; METH-ACETATE-PWY; PWY-6142; UBISYN-PWY; PWY-6154; PWY-6424; PWY-5856; CO2FORM-PWY; PWY-5116; PWY-1581; PWY-5773; PWY-6519; METHIONINE-DEG1-PWY; PWY-5328; PWY-6146; PWY-6427; PWY-6395; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6292; PWY-5479; PWY-5987;
metacyc_pathway_name gibberellin inactivation II (methylation);; gramine biosynthesis;; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; autoinducer AI-2 biosynthesis I;; choline biosynthesis II;; superpathway of chorismate metabolism;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; vitamin E biosynthesis (tocopherols);; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; methanogenesis from acetate;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; ubiquinol-9 biosynthesis (prokaryotic);; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; xanthohumol biosynthesis;; biotin biosynthesis I;; superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;;
metacyc_pathway_type GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Autotrophic-CO2-Fixation;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Autoinducer-Biosynthesis;; Choline-Biosynthesis;; Super-Pathways;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; METHANOGENESIS;; Gluconeogenesis; Super-Pathways;; Super-Pathways; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; Ubiquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;;
pfam_acc PF04452;
pfam_desc RNA methyltransferase;
pfam_id Methyltrans_RNA;
pfam_target db:Pfam-A.hmm|PF04452.14 evalue:2.6e-51 score:173.4 best_domain_score:173.2 name:Methyltrans_RNA;
sprot_desc Ribosomal RNA small subunit methyltransferase E;
sprot_id sp|P72667|RSME_SYNY3;
sprot_target db:uniprot_sprot|sp|P72667|RSME_SYNY3 22 237 evalue:7.0e-16 qcov:87.40 identity:32.90;
tigrfam_acc TIGR00046;
tigrfam_desc RNA methyltransferase, RsmE family;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00046;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00046 evalue:6.8e-36 score:123.0 best_domain_score:122.5 name:TIGR00046;
29939 30418 CDS
ID metaerg.pl|03473
allgo_ids GO:0043565;
allko_ids K00820;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669930.1 23 159 evalue:9.8e-33 qcov:86.20 identity:60.90;
kegg_pathway_id 00530; 00251;
kegg_pathway_name Aminosugars metabolism; Glutamate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF13443; PF01381; PF13560;
pfam_desc Cro/C1-type HTH DNA-binding domain; Helix-turn-helix; Helix-turn-helix domain;
pfam_id HTH_26; HTH_3; HTH_31;
pfam_target db:Pfam-A.hmm|PF13443.6 evalue:1.7e-05 score:24.4 best_domain_score:11.9 name:HTH_26; db:Pfam-A.hmm|PF01381.22 evalue:1.9e-10 score:39.8 best_domain_score:38.0 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:6.1e-10 score:38.5 best_domain_score:35.5 name:HTH_31;
30655 31629 CDS
ID metaerg.pl|03474
allgo_ids GO:0005524; GO:0005737; GO:0003723;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Prauserella_A;s__Prauserella_A marina;
genomedb_acc GCF_002240355.1;
genomedb_target db:genomedb|GCF_002240355.1|WP_091795249.1 4 318 evalue:2.4e-110 qcov:97.20 identity:66.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF13245; PF13604; PF02562;
pfam_desc AAA domain; AAA domain; PhoH-like protein;
pfam_id AAA_19; AAA_30; PhoH;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:7.7e-07 score:28.8 best_domain_score:26.2 name:AAA_19; db:Pfam-A.hmm|PF13604.6 evalue:1.3e-09 score:37.3 best_domain_score:36.3 name:AAA_30; db:Pfam-A.hmm|PF02562.16 evalue:1.5e-92 score:307.9 best_domain_score:307.1 name:PhoH;
sprot_desc PhoH-like protein;
sprot_id sp|P0A5S1|PHOL_MYCBO;
sprot_target db:uniprot_sprot|sp|P0A5S1|PHOL_MYCBO 1 296 evalue:1.1e-96 qcov:91.40 identity:60.80;
31631 32116 CDS
ID metaerg.pl|03475
allec_ids 3.1.-.-;
allgo_ids GO:0004222; GO:0006364; GO:0005737; GO:0004521; GO:0008270;
allko_ids K07042;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668393.1 1 144 evalue:4.4e-57 qcov:89.40 identity:77.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF02130;
pfam_desc Uncharacterized protein family UPF0054;
pfam_id UPF0054;
pfam_target db:Pfam-A.hmm|PF02130.17 evalue:5.8e-32 score:109.4 best_domain_score:109.3 name:UPF0054;
sprot_desc Endoribonuclease YbeY;
sprot_id sp|A4XAD4|YBEY_SALTO;
sprot_target db:uniprot_sprot|sp|A4XAD4|YBEY_SALTO 1 143 evalue:2.6e-32 qcov:88.80 identity:52.30;
tigrfam_acc TIGR00043;
tigrfam_desc rRNA maturation RNase YbeY;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00043;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00043 evalue:9.7e-29 score:98.9 best_domain_score:98.6 name:TIGR00043;
32148 33686 CDS
ID metaerg.pl|03476
allgo_ids GO:0016021; GO:0005886; GO:0050660;
allko_ids K00088; K05847; K01697;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668392.1 8 434 evalue:4.0e-128 qcov:83.40 identity:62.00;
kegg_pathway_id 00230; 00260; 02010; 00983; 00450; 00271;
kegg_pathway_name Purine metabolism; Glycine, serine and threonine metabolism; ABC transporters - General; Drug metabolism - other enzymes; Selenoamino acid metabolism; Methionine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00571; PF03471; PF01595;
pfam_desc CBS domain; Transporter associated domain; Cyclin M transmembrane N-terminal domain;
pfam_id CBS; CorC_HlyC; DUF21;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:1.8e-15 score:56.3 best_domain_score:34.7 name:CBS; db:Pfam-A.hmm|PF03471.17 evalue:2.1e-20 score:71.7 best_domain_score:70.4 name:CorC_HlyC; db:Pfam-A.hmm|PF01595.20 evalue:5.9e-26 score:90.5 best_domain_score:90.0 name:DUF21;
sprot_desc hypothetical protein;
sprot_id sp|P9WFP0|Y2366_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WFP0|Y2366_MYCTO 11 426 evalue:6.6e-45 qcov:81.20 identity:34.60;
tm_num 3;
32148 33686 transmembrane_helix
ID metaerg.pl|03477
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology o32175-32243i32334-32402o32412-32480i;
33664 34104 CDS
ID metaerg.pl|03478
allec_ids 3.5.4.5;
allgo_ids GO:0004126; GO:0008270; GO:0009972; GO:0005829; GO:0005576; GO:1904813; GO:0034774; GO:1904724; GO:0001882; GO:0042803; GO:0007166; GO:0019858; GO:0030308; GO:0045980; GO:0043312; GO:0051289; GO:0043097; GO:0008655;
allko_ids K01489;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669928.1 13 144 evalue:9.3e-62 qcov:90.40 identity:89.40;
kegg_pathway_id 00983; 00240;
kegg_pathway_name Drug metabolism - other enzymes; Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id PWY0-163; PWY0-1295; PWY-6556; P1-PWY;
metacyc_pathway_name ; pyrimidine ribonucleosides degradation;; pyrimidine ribonucleosides salvage II;; ;
metacyc_pathway_type ; Pyrimidine-Ribonucleosides-Degradation;; Pyrimidine-Nucleotide-Salvage; Pyrimidine-Ribonucleosides-Degradation;; ;
pfam_acc PF00383; PF08211;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; Cytidine and deoxycytidylate deaminase zinc-binding region;
pfam_id dCMP_cyt_deam_1; dCMP_cyt_deam_2;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:8.5e-21 score:73.0 best_domain_score:72.8 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF08211.12 evalue:2.4e-13 score:49.7 best_domain_score:43.5 name:dCMP_cyt_deam_2;
sprot_desc Cytidine deaminase;
sprot_id sp|P32320|CDD_HUMAN;
sprot_target db:uniprot_sprot|sp|P32320|CDD_HUMAN 16 141 evalue:8.6e-22 qcov:86.30 identity:41.70;
tigrfam_acc TIGR01354;
tigrfam_desc cytidine deaminase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name cyt_deam_tetra;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01354 evalue:1.5e-42 score:144.0 best_domain_score:143.8 name:TIGR01354;
34101 35078 CDS
ID metaerg.pl|03479
allgo_ids GO:0005525; GO:0005737; GO:0005886; GO:0003924; GO:0070181; GO:0042274;
allko_ids K03595;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669926.1 17 325 evalue:6.5e-124 qcov:95.10 identity:75.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00025; PF00350; PF02421; PF00009; PF07650; PF01926; PF03193;
pfam_desc ADP-ribosylation factor family; Dynamin family; Ferrous iron transport protein B; Elongation factor Tu GTP binding domain; KH domain; 50S ribosome-binding GTPase; RsgA GTPase;
pfam_id Arf; Dynamin_N; FeoB_N; GTP_EFTU; KH_2; MMR_HSR1; RsgA_GTPase;
pfam_target db:Pfam-A.hmm|PF00025.21 evalue:2.5e-05 score:23.1 best_domain_score:21.7 name:Arf; db:Pfam-A.hmm|PF00350.23 evalue:2.6e-09 score:36.6 best_domain_score:24.4 name:Dynamin_N; db:Pfam-A.hmm|PF02421.18 evalue:1.2e-10 score:40.3 best_domain_score:39.4 name:FeoB_N; db:Pfam-A.hmm|PF00009.27 evalue:6e-10 score:38.2 best_domain_score:31.7 name:GTP_EFTU; db:Pfam-A.hmm|PF07650.17 evalue:1.3e-17 score:62.6 best_domain_score:62.0 name:KH_2; db:Pfam-A.hmm|PF01926.23 evalue:8e-22 score:76.7 best_domain_score:75.8 name:MMR_HSR1; db:Pfam-A.hmm|PF03193.16 evalue:2.1e-08 score:33.5 best_domain_score:20.6 name:RsgA_GTPase;
sprot_desc GTPase Era;
sprot_id sp|A0QEB0|ERA_MYCA1;
sprot_target db:uniprot_sprot|sp|A0QEB0|ERA_MYCA1 30 325 evalue:7.1e-77 qcov:91.10 identity:51.00;
tigrfam_acc TIGR00231; TIGR00436;
tigrfam_desc small GTP-binding protein domain; GTP-binding protein Era;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; era;
tigrfam_sub1role General; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:4.3e-23 score:81.0 best_domain_score:80.5 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00436 evalue:7.6e-72 score:241.0 best_domain_score:240.8 name:TIGR00436;
35171 36232 CDS
ID metaerg.pl|03480
allgo_ids GO:0008299;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas sp001429255;
genomedb_acc GCA_001429255.1;
genomedb_target db:genomedb|GCA_001429255.1|KRD44952.1 4 351 evalue:7.1e-124 qcov:98.60 identity:67.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:1.3e-47 score:161.3 best_domain_score:160.9 name:polyprenyl_synt;
36256 36963 CDS
ID metaerg.pl|03481
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
36960 37565 CDS
ID metaerg.pl|03482
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas sp001429255;
genomedb_acc GCA_001429255.1;
genomedb_target db:genomedb|GCA_001429255.1|KRD44954.1 15 201 evalue:2.4e-28 qcov:93.00 identity:43.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
37562 38557 CDS
ID metaerg.pl|03483
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas sp001429255;
genomedb_acc GCA_001429255.1;
genomedb_target db:genomedb|GCA_001429255.1|KRD44955.1 5 329 evalue:1.6e-77 qcov:98.20 identity:48.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
38547 39158 CDS
ID metaerg.pl|03484
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
39385 39669 CDS
ID metaerg.pl|03485
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
39698 39964 CDS
ID metaerg.pl|03486
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
40183 41379 CDS
ID metaerg.pl|03487
allec_ids 2.1.1.269;
allgo_ids GO:0008168;
allko_ids K00605; K00302; K17486;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Saccharopolyspora;s__Saccharopolyspora erythraea;
genomedb_acc GCF_000062885.1;
genomedb_target db:genomedb|GCF_000062885.1|WP_009944606.1 1 397 evalue:3.2e-181 qcov:99.70 identity:75.10;
kegg_pathway_id 00910; 00670; 00260;
kegg_pathway_name Nitrogen metabolism; One carbon pool by folate; Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01571; PF08669;
pfam_desc Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain;
pfam_id GCV_T; GCV_T_C;
pfam_target db:Pfam-A.hmm|PF01571.21 evalue:7.7e-47 score:159.0 best_domain_score:158.7 name:GCV_T; db:Pfam-A.hmm|PF08669.11 evalue:2.7e-14 score:52.1 best_domain_score:51.1 name:GCV_T_C;
sprot_desc Dimethylsulfonioproprionate demethylase DmdA;
sprot_id sp|Q4FP21|DMDA_PELUB;
sprot_target db:uniprot_sprot|sp|Q4FP21|DMDA_PELUB 14 383 evalue:2.2e-67 qcov:93.00 identity:35.10;
41465 42301 CDS
ID metaerg.pl|03488
allgo_ids GO:0004489; GO:0006555; GO:0055114;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442128.1 6 274 evalue:9.3e-87 qcov:96.80 identity:59.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF02219;
pfam_desc Methylenetetrahydrofolate reductase;
pfam_id MTHFR;
pfam_target db:Pfam-A.hmm|PF02219.17 evalue:1.6e-08 score:33.5 best_domain_score:32.8 name:MTHFR;
42298 43998 CDS
ID metaerg.pl|03489
allec_ids 6.3.4.3;
allgo_ids GO:0004329; GO:0005524; GO:0035999;
allko_ids K01491; K01938; K13402; K13403; K00288;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia acaciae;
genomedb_acc GCF_000620785.1;
genomedb_target db:genomedb|GCF_000620785.1|WP_028925245.1 5 566 evalue:3.4e-253 qcov:99.30 identity:76.90;
kegg_pathway_id 00630; 00670;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; One carbon pool by folate;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id CODH-PWY; PWY-2201; PWY-1882; PWY-5497; PWY-3841; P164-PWY; PWY-6142; 1CMET2-PWY; PWY-2161; PWY-1722; PWY-6146;
metacyc_pathway_name reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; folate transformations I;; superpathway of C1 compounds oxidation to CO2;; purine nucleobases degradation II (anaerobic);; folate transformations II;; purine nucleobases degradation I (anaerobic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; N10-formyl-tetrahydrofolate biosynthesis;; folate polyglutamylation;; formate assimilation into 5,10-methylenetetrahydrofolate;; Methanobacterium thermoautotrophicum biosynthetic metabolism;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; Folate-Transformations;; C1-COMPOUNDS; Super-Pathways;; Fermentation; Purine-Degradation;; Folate-Transformations;; Fermentation; Purine-Degradation;; Gluconeogenesis; Super-Pathways;; Folate-Biosynthesis;; Folate-Biosynthesis;; C1-COMPOUNDS;; Biosynthesis; Super-Pathways;;
pfam_acc PF01268;
pfam_desc Formate--tetrahydrofolate ligase;
pfam_id FTHFS;
pfam_target db:Pfam-A.hmm|PF01268.19 evalue:6.3e-246 score:816.1 best_domain_score:815.9 name:FTHFS;
sprot_desc Formate--tetrahydrofolate ligase;
sprot_id sp|A4FL80|FTHS_SACEN;
sprot_target db:uniprot_sprot|sp|A4FL80|FTHS_SACEN 4 566 evalue:1.9e-247 qcov:99.50 identity:74.60;
43995 44597 CDS
ID metaerg.pl|03490
allgo_ids GO:0003824; GO:0044237;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia acaciae;
genomedb_acc GCF_000620785.1;
genomedb_target db:genomedb|GCF_000620785.1|WP_084211325.1 3 189 evalue:1.5e-17 qcov:93.50 identity:45.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF04961;
pfam_desc Formiminotransferase-cyclodeaminase;
pfam_id FTCD_C;
pfam_target db:Pfam-A.hmm|PF04961.12 evalue:3.9e-22 score:78.1 best_domain_score:77.8 name:FTCD_C;
44594 45949 CDS
ID metaerg.pl|03491
allec_ids 6.3.2.12; 6.3.2.-;
allgo_ids GO:0005524; GO:0009058; GO:0016874; GO:0005737; GO:0008841; GO:0046872; GO:0004326; GO:0046656; GO:0009396; GO:0046677; GO:0046654;
allko_ids K11754;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Sciscionella;s__Sciscionella marina;
genomedb_acc GCF_000379465.1;
genomedb_target db:genomedb|GCF_000379465.1|WP_020500736.1 7 416 evalue:2.9e-37 qcov:90.90 identity:33.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id PWY-6548; PWY-6455; FOLSYN-PWY; ALL-CHORISMATE-PWY; 1CMET2-PWY; PWY-3841;
metacyc_pathway_name ; vancomycin resistance II;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;; N10-formyl-tetrahydrofolate biosynthesis;; folate transformations II;;
metacyc_pathway_type ; Cell-Wall-Biosynthesis; Vancomycin-Resistnace;; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;; Folate-Biosynthesis;; Folate-Transformations;;
pfam_acc PF02875; PF08245;
pfam_desc Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF02875.21 evalue:4.6e-06 score:26.0 best_domain_score:23.8 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:1.2e-10 score:40.9 best_domain_score:40.4 name:Mur_ligase_M;
sprot_desc Dihydrofolate synthase/folylpolyglutamate synthase;
sprot_id sp|I6Y0R5|FOLC_MYCTU;
sprot_target db:uniprot_sprot|sp|I6Y0R5|FOLC_MYCTU 26 388 evalue:7.9e-34 qcov:80.50 identity:33.90;
tigrfam_acc TIGR01499;
tigrfam_desc bifunctional protein FolC;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name folC;
tigrfam_sub1role Folic acid;
tigrfam_target db:TIGRFAMs.hmm|TIGR01499 evalue:2e-64 score:217.6 best_domain_score:206.1 name:TIGR01499;
45946 46791 CDS
ID metaerg.pl|03492
allgo_ids GO:0003700; GO:0006355; GO:0003677; GO:0044010; GO:0006351;
casgene_acc cd09655_casR_CAS-I; cls001593_casR_CAS-I;
casgene_name casR; casR;
casgene_target db:casgenes.hmm|cd09655_casR_CAS-I evalue:2.3e-06 score:26.5 best_domain_score:25.4 name:casR; db:casgenes.hmm|cls001593_casR_CAS-I evalue:3.2e-07 score:29.0 best_domain_score:28.3 name:casR;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665953.1 1 270 evalue:2.2e-67 qcov:96.10 identity:54.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01022; PF09339; PF01614; PF01047; PF12802; PF02082; PF01978;
pfam_desc Bacterial regulatory protein, arsR family; IclR helix-turn-helix domain; Bacterial transcriptional regulator; MarR family; MarR family; Transcriptional regulator; Sugar-specific transcriptional regulator TrmB;
pfam_id HTH_5; HTH_IclR; IclR; MarR; MarR_2; Rrf2; TrmB;
pfam_target db:Pfam-A.hmm|PF01022.20 evalue:0.00015 score:20.8 best_domain_score:19.6 name:HTH_5; db:Pfam-A.hmm|PF09339.10 evalue:1.1e-15 score:56.4 best_domain_score:55.6 name:HTH_IclR; db:Pfam-A.hmm|PF01614.18 evalue:9.7e-34 score:115.2 best_domain_score:114.5 name:IclR; db:Pfam-A.hmm|PF01047.22 evalue:6.3e-06 score:25.3 best_domain_score:24.0 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:4.5e-07 score:28.9 best_domain_score:24.2 name:MarR_2; db:Pfam-A.hmm|PF02082.20 evalue:8.6e-05 score:22.1 best_domain_score:20.7 name:Rrf2; db:Pfam-A.hmm|PF01978.19 evalue:2.2e-06 score:26.7 best_domain_score:25.8 name:TrmB;
sprot_desc HTH-type transcriptional regulator XynR;
sprot_id sp|P77300|XYNR_ECOLI;
sprot_target db:uniprot_sprot|sp|P77300|XYNR_ECOLI 23 269 evalue:3.2e-25 qcov:87.90 identity:30.10;
46930 47448 CDS
ID metaerg.pl|03493
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Thermoflexales;f__Thermoflexaceae;g__Thermoflexus;s__Thermoflexus hugenholtzii;
genomedb_acc GCF_900187885.1;
genomedb_target db:genomedb|GCF_900187885.1|WP_088572481.1 36 165 evalue:1.4e-13 qcov:75.60 identity:32.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
tm_num 1;
46930 47448 transmembrane_helix
ID metaerg.pl|03494
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i46963-47016o;
48705 47527 CDS
ID metaerg.pl|03495
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005886; GO:0003995; GO:0050660; GO:0052890; GO:0030435;
allko_ids K00249; K11731; K09478; K00120; K00252; K06446; K00253; K11410; K00248; K14448; K18244;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Luminiphilus;s__Luminiphilus sp000169115;
genomedb_acc GCF_000169115.1;
genomedb_target db:genomedb|GCF_000169115.1|WP_007235404.1 20 391 evalue:3.2e-125 qcov:94.90 identity:58.10;
kegg_pathway_id 00640; 00650; 00071; 00410; 00903; 00361; 00930; 00632; 00380; 00310; 00624; 00280; 00626;
kegg_pathway_name Propanoate metabolism; Butanoate metabolism; Fatty acid metabolism; beta-Alanine metabolism; Limonene and pinene degradation; gamma-Hexachlorocyclohexane degradation; Caprolactam degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Valine, leucine and isoleucine degradation; Naphthalene and anthracene degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id CARNMET-PWY; PWY-699; PWY-6544; PWY-2582;
metacyc_pathway_name L-carnitine degradation I;; brassinosteroid biosynthesis I;; superpathway of C28 brassinosteroid biosynthesis;; brassinosteroid biosynthesis II;;
metacyc_pathway_type CARN-DEG;; Brassinosteroid-Biosynthesis;; Super-Pathways;; Brassinosteroid-Biosynthesis;;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:6.3e-39 score:132.8 best_domain_score:132.3 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:2.4e-16 score:59.5 best_domain_score:58.7 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:2.8e-19 score:68.3 best_domain_score:67.7 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:8.9e-22 score:77.1 best_domain_score:76.2 name:Acyl-CoA_dh_N;
sprot_desc Acyl-CoA dehydrogenase;
sprot_id sp|P45857|ACDB_BACSU;
sprot_target db:uniprot_sprot|sp|P45857|ACDB_BACSU 6 382 evalue:5.4e-39 qcov:96.20 identity:29.10;
51301 48851 CDS
ID metaerg.pl|03496
allec_ids 3.2.1.-;
allgo_ids GO:0003824; GO:0005975; GO:0030246; GO:0016798; GO:0005992;
allko_ids K01194; K10231; K00691; K01838;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Patulibacter;s__Patulibacter medicamentivorans;
genomedb_acc GCF_000240225.1;
genomedb_target db:genomedb|GCF_000240225.1|WP_007570634.1 4 793 evalue:6.8e-255 qcov:96.80 identity:56.70;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id PWY-862; SUCROSEUTIL2-PWY; PWY-5976; PWY-5825; PWY-5821;
metacyc_pathway_name fructan degradation;; sucrose degradation VII (sucrose 3-dehydrogenase);; dhurrin degradation;; dalpatein and dalnigrein biosynthesis;; dalcochinin biosynthesis;;
metacyc_pathway_type Glycan-Pathways; POLYSACCHARIDES-DEG;; SUCROSE-DEG;; CYANOGENIC-GLUCOSIDE-DEG;; ISOFLAVONOID-SYN;; ISOFLAVONOID-SYN;;
pfam_acc PF03633; PF03632; PF03636;
pfam_desc Glycosyl hydrolase family 65, C-terminal domain ; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain;
pfam_id Glyco_hydro_65C; Glyco_hydro_65m; Glyco_hydro_65N;
pfam_target db:Pfam-A.hmm|PF03633.15 evalue:2e-05 score:23.6 best_domain_score:21.8 name:Glyco_hydro_65C; db:Pfam-A.hmm|PF03632.15 evalue:1.4e-138 score:461.2 best_domain_score:460.9 name:Glyco_hydro_65m; db:Pfam-A.hmm|PF03636.15 evalue:1.4e-55 score:187.6 best_domain_score:186.6 name:Glyco_hydro_65N;
sprot_desc Uncharacterized glycosyl hydrolase MT2062;
sprot_id sp|P9WN14|Y2006_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WN14|Y2006_MYCTO 2 789 evalue:8.8e-225 qcov:96.60 identity:49.70;
52415 51360 CDS
ID metaerg.pl|03497
allec_ids 1.1.1.103;
allgo_ids GO:0055114; GO:0005737; GO:0008743; GO:0008270; GO:0019518;
allko_ids K13952; K07538; K13953; K13980; K00120; K00121; K00055; K00001; K13951; K00060;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Beutenbergiaceae;g__Ruania;s__Ruania albidiflava;
genomedb_acc GCF_000421225.1;
genomedb_target db:genomedb|GCF_000421225.1|WP_022917081.1 1 351 evalue:5.3e-164 qcov:100.00 identity:80.30;
kegg_pathway_id 00903; 00350; 00641; 00632; 00120; 00361; 00621; 00071; 00360; 00680; 00626; 00622; 00624; 00010; 00930; 00260;
kegg_pathway_name Limonene and pinene degradation; Tyrosine metabolism; 3-Chloroacrylic acid degradation; Benzoate degradation via CoA ligation; Bile acid biosynthesis; gamma-Hexachlorocyclohexane degradation; Biphenyl degradation; Fatty acid metabolism; Phenylalanine metabolism; Methane metabolism; Naphthalene and anthracene degradation; Toluene and xylene degradation; 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis; Caprolactam degradation; Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id THREONINE-DEG2-PWY; THREOCAT-PWY; THRDLCTCAT-PWY; PWY-5448;
metacyc_pathway_name L-threonine degradation II;; superpathway of L-threonine metabolism;; L-threonine degradation III (to methylglyoxal);; ;
metacyc_pathway_type THREONINE-DEG;; Super-Pathways; THREONINE-DEG;; THREONINE-DEG;; ;
pfam_acc PF08240; PF00107; PF13602;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N; ADH_zinc_N_2;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:5.5e-30 score:102.7 best_domain_score:101.4 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:2e-25 score:88.5 best_domain_score:87.9 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:1.6e-06 score:28.5 best_domain_score:27.6 name:ADH_zinc_N_2;
sprot_desc L-threonine 3-dehydrogenase;
sprot_id sp|A1S1Q3|TDH_SHEAM;
sprot_target db:uniprot_sprot|sp|A1S1Q3|TDH_SHEAM 1 334 evalue:1.2e-32 qcov:95.20 identity:30.30;
tm_num 1;
52415 51360 transmembrane_helix
ID metaerg.pl|03498
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i51882-51950o;
52967 52578 CDS
ID metaerg.pl|03499
allgo_ids GO:0003700; GO:0006355;
casgene_acc COG0640_csa3_CAS-I-A;
casgene_name csa3;
casgene_target db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:3e-17 score:62.3 best_domain_score:62.1 name:csa3;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441803.1 1 113 evalue:1.2e-36 qcov:87.60 identity:73.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF12840; PF01022;
pfam_desc Helix-turn-helix domain; Bacterial regulatory protein, arsR family;
pfam_id HTH_20; HTH_5;
pfam_target db:Pfam-A.hmm|PF12840.7 evalue:3.4e-13 score:48.7 best_domain_score:47.8 name:HTH_20; db:Pfam-A.hmm|PF01022.20 evalue:2.7e-13 score:48.8 best_domain_score:47.0 name:HTH_5;
53602 52964 CDS
ID metaerg.pl|03500
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667884.1 1 211 evalue:2.7e-86 qcov:99.50 identity:73.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF08327;
pfam_desc Activator of Hsp90 ATPase homolog 1-like protein;
pfam_id AHSA1;
pfam_target db:Pfam-A.hmm|PF08327.11 evalue:3e-15 score:55.8 best_domain_score:54.9 name:AHSA1;
53778 54239 CDS
ID metaerg.pl|03501
allko_ids K01759;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp003076135;
genomedb_acc GCA_003076135.1;
genomedb_target db:genomedb|GCA_003076135.1|PVG83364.1 1 153 evalue:3.5e-59 qcov:100.00 identity:74.50;
kegg_pathway_id 00620; 04011;
kegg_pathway_name Pyruvate metabolism; MAPK signaling pathway - yeast;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF18029;
pfam_desc Glyoxalase-like domain;
pfam_id Glyoxalase_6;
pfam_target db:Pfam-A.hmm|PF18029.1 evalue:1.8e-25 score:89.0 best_domain_score:85.9 name:Glyoxalase_6;
54789 54397 CDS
ID metaerg.pl|03502
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinomycetospora;s__Actinomycetospora cinnamomea;
genomedb_acc GCA_003096675.1;
genomedb_target db:genomedb|GCA_003096675.1|PVY95468.1 1 129 evalue:6.6e-43 qcov:99.20 identity:68.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
tm_num 4;
54789 54397 transmembrane_helix
ID metaerg.pl|03503
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i54400-54465o54508-54576i54589-54657o54685-54753i;
55219 55632 CDS
ID metaerg.pl|03504
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
56465 55437 CDS
ID metaerg.pl|03505
allgo_ids GO:0009055; GO:0050660;
allko_ids K03522;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__MedAcidi-G1;g__S20-B6;s__S20-B6 sp002346745;
genomedb_acc GCA_002346745.1;
genomedb_target db:genomedb|GCA_002346745.1|DEAL01000030.1_46 16 339 evalue:1.1e-76 qcov:94.70 identity:55.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01012; PF00766;
pfam_desc Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain;
pfam_id ETF; ETF_alpha;
pfam_target db:Pfam-A.hmm|PF01012.21 evalue:2.9e-18 score:65.6 best_domain_score:64.8 name:ETF; db:Pfam-A.hmm|PF00766.19 evalue:3.7e-33 score:112.7 best_domain_score:112.3 name:ETF_alpha;
sprot_desc Electron transfer flavoprotein subunit alpha;
sprot_id sp|P94551|ETFA_BACSU;
sprot_target db:uniprot_sprot|sp|P94551|ETFA_BACSU 1 335 evalue:3.1e-30 qcov:98.00 identity:31.30;
57229 56462 CDS
ID metaerg.pl|03506
allgo_ids GO:0009055;
allko_ids K03521;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665959.1 1 255 evalue:9.8e-83 qcov:100.00 identity:64.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01012;
pfam_desc Electron transfer flavoprotein domain;
pfam_id ETF;
pfam_target db:Pfam-A.hmm|PF01012.21 evalue:5.7e-31 score:107.0 best_domain_score:106.8 name:ETF;
sprot_desc Electron transfer flavoprotein subunit beta;
sprot_id sp|O33095|ETFB_MYCLE;
sprot_target db:uniprot_sprot|sp|O33095|ETFB_MYCLE 2 208 evalue:7.9e-23 qcov:81.20 identity:34.30;
60148 57638 CDS
ID metaerg.pl|03507
allec_ids 1.5.3.10;
allgo_ids GO:0016491; GO:0055114; GO:0047866; GO:0000166;
allko_ids K00314; K00315; K00302; K00605;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665958.1 1 836 evalue:0.0e+00 qcov:100.00 identity:76.80;
kegg_pathway_id 00670; 00260; 00910;
kegg_pathway_name One carbon pool by folate; Glycine, serine and threonine metabolism; Nitrogen metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01266; PF16350; PF01571; PF08669; PF04268;
pfam_desc FAD dependent oxidoreductase; FAD dependent oxidoreductase central domain; Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; Sarcosine oxidase, gamma subunit family;
pfam_id DAO; FAO_M; GCV_T; GCV_T_C; SoxG;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:1.9e-46 score:158.5 best_domain_score:157.6 name:DAO; db:Pfam-A.hmm|PF16350.5 evalue:1.7e-14 score:53.1 best_domain_score:52.1 name:FAO_M; db:Pfam-A.hmm|PF01571.21 evalue:6.4e-67 score:224.8 best_domain_score:224.4 name:GCV_T; db:Pfam-A.hmm|PF08669.11 evalue:4.2e-08 score:32.3 best_domain_score:30.3 name:GCV_T_C; db:Pfam-A.hmm|PF04268.12 evalue:4.7e-07 score:29.3 best_domain_score:28.6 name:SoxG;
sprot_desc Dimethylglycine oxidase;
sprot_id sp|Q9AGP8|DMGO_ARTGO;
sprot_target db:uniprot_sprot|sp|Q9AGP8|DMGO_ARTGO 1 835 evalue:7.5e-147 qcov:99.90 identity:36.40;
60873 60184 CDS
ID metaerg.pl|03508
allgo_ids GO:0003700; GO:0006355; GO:0003677;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442129.1 34 229 evalue:1.3e-62 qcov:85.60 identity:67.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:8.7e-23 score:80.3 best_domain_score:79.8 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:2e-18 score:65.0 best_domain_score:65.0 name:GntR;
sprot_desc Uncharacterized HTH-type transcriptional regulator in unstable DNA locus;
sprot_id sp|P32425|YIN1_STRAM;
sprot_target db:uniprot_sprot|sp|P32425|YIN1_STRAM 27 218 evalue:3.9e-13 qcov:83.80 identity:28.50;
62522 61032 CDS
ID metaerg.pl|03509
allec_ids 4.1.99.13;
allgo_ids GO:0051539; GO:0003914; GO:0003677; GO:0071949; GO:0046872; GO:0000719; GO:0018298;
allko_ids K06876;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Microtrichaceae;g__Microthrix;s__Microthrix parvicella;
genomedb_acc GCF_000299415.1;
genomedb_target db:genomedb|GCF_000299415.1|WP_020379142.1 1 496 evalue:1.2e-166 qcov:100.00 identity:58.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF04244;
pfam_desc Deoxyribodipyrimidine photo-lyase-related protein;
pfam_id DPRP;
pfam_target db:Pfam-A.hmm|PF04244.13 evalue:1.2e-53 score:181.5 best_domain_score:180.3 name:DPRP;
sprot_desc (6-4) photolyase;
sprot_id sp|A9CH39|PHRB_AGRFC;
sprot_target db:uniprot_sprot|sp|A9CH39|PHRB_AGRFC 2 491 evalue:5.4e-100 qcov:98.80 identity:41.80;
63033 62581 CDS
ID metaerg.pl|03510
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665955.1 1 150 evalue:2.6e-51 qcov:100.00 identity:69.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:3.2e-27 score:95.0 best_domain_score:94.6 name:Usp;
sprot_desc Universal stress protein MT2085;
sprot_id sp|P9WFD0|Y2026_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WFD0|Y2026_MYCTO 4 148 evalue:1.9e-16 qcov:96.70 identity:38.60;
64701 63067 CDS
ID metaerg.pl|03511
allgo_ids GO:0016020; GO:0022857; GO:0071705; GO:0016021; GO:0005886; GO:0006865; GO:0006814;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665954.1 2 542 evalue:7.1e-208 qcov:99.40 identity:69.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF02028;
pfam_desc BCCT, betaine/carnitine/choline family transporter;
pfam_id BCCT;
pfam_target db:Pfam-A.hmm|PF02028.17 evalue:8.8e-190 score:630.5 best_domain_score:630.3 name:BCCT;
sprot_desc Glycine betaine/proline betaine transporter BetS;
sprot_id sp|G3XCN6|BETS_RHIML;
sprot_target db:uniprot_sprot|sp|G3XCN6|BETS_RHIML 8 502 evalue:2.4e-130 qcov:91.00 identity:48.30;
tigrfam_acc TIGR00842;
tigrfam_desc transporter, betaine/carnitine/choline transporter (BCCT) family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name bcct;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00842 evalue:1.7e-156 score:520.6 best_domain_score:520.4 name:TIGR00842;
tm_num 12;
64701 63067 transmembrane_helix
ID metaerg.pl|03512
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i63103-63171o63214-63282i63337-63405o63493-63561i63643-63711o63754-63822i63859-63927o64006-64074i64111-64170o64276-64344i64405-64473o64486-64554i;
65368 64919 CDS
ID metaerg.pl|03513
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
tm_num 5;
65368 64919 transmembrane_helix
ID metaerg.pl|03514
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology o64961-65029i65048-65116o65126-65194i65207-65275o65285-65344i;
65552 66127 CDS
ID metaerg.pl|03515
allec_ids 3.-.-.-;
allgo_ids GO:0016787; GO:0016818; GO:0000287;
allko_ids K01515;
genomedb_OC d__Bacteria;p__Hydrogenedentota;c__Hydrogenedentia;o__Hydrogenedentiales;f__GCA-2746185;g__GCA-2746185;s__GCA-2746185 sp002746185;
genomedb_acc GCA_002746185.1;
genomedb_target db:genomedb|GCA_002746185.1|PCJ58245.1 14 186 evalue:4.9e-47 qcov:90.60 identity:54.90;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:8.5e-16 score:57.4 best_domain_score:57.0 name:NUDIX;
sprot_desc Methanol dehydrogenase activator;
sprot_id sp|Q8KP10|ACT_BACMT;
sprot_target db:uniprot_sprot|sp|Q8KP10|ACT_BACMT 18 181 evalue:6.2e-12 qcov:85.90 identity:30.10;
66124 66585 CDS
ID metaerg.pl|03516
allko_ids K06379; K04757; K08801; K08282;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF13581;
pfam_desc Histidine kinase-like ATPase domain;
pfam_id HATPase_c_2;
pfam_target db:Pfam-A.hmm|PF13581.6 evalue:8.3e-15 score:54.1 best_domain_score:53.8 name:HATPase_c_2;
66651 67280 CDS
ID metaerg.pl|03517
allec_ids 5.4.2.-;
allko_ids K01837; K01842; K15640; K15634; K01834; K02226;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441863.1 1 209 evalue:1.0e-74 qcov:100.00 identity:70.60;
kegg_pathway_id 00010; 00860;
kegg_pathway_name Glycolysis / Gluconeogenesis; Porphyrin and chlorophyll metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00300;
pfam_desc Histidine phosphatase superfamily (branch 1);
pfam_id His_Phos_1;
pfam_target db:Pfam-A.hmm|PF00300.22 evalue:5.4e-45 score:152.7 best_domain_score:152.5 name:His_Phos_1;
tigrfam_acc TIGR03848;
tigrfam_desc probable phosphomutase, MSMEG_4193 family;
tigrfam_name MSMEG_4193;
tigrfam_target db:TIGRFAMs.hmm|TIGR03848 evalue:4e-62 score:208.4 best_domain_score:208.2 name:TIGR03848;
67277 67810 CDS
ID metaerg.pl|03518
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668366.1 1 177 evalue:2.0e-66 qcov:100.00 identity:69.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF11290;
pfam_desc Protein of unknown function (DUF3090);
pfam_id DUF3090;
pfam_target db:Pfam-A.hmm|PF11290.8 evalue:2.7e-38 score:130.7 best_domain_score:130.5 name:DUF3090;
tigrfam_acc TIGR03847;
tigrfam_desc conserved hypothetical protein;
tigrfam_name TIGR03847;
tigrfam_target db:TIGRFAMs.hmm|TIGR03847 evalue:5.1e-38 score:129.7 best_domain_score:129.5 name:TIGR03847;
67816 68637 CDS
ID metaerg.pl|03519
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442281.1 18 273 evalue:6.8e-90 qcov:93.80 identity:60.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
tigrfam_acc TIGR03843;
tigrfam_desc conserved hypothetical protein;
tigrfam_name TIGR03843;
tigrfam_target db:TIGRFAMs.hmm|TIGR03843 evalue:9.3e-72 score:240.5 best_domain_score:228.9 name:TIGR03843;
68655 69101 CDS
ID metaerg.pl|03520
allec_ids 2.3.1.-;
allgo_ids GO:0016747;
allko_ids K06957;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Dactylosporangium;s__Dactylosporangium aurantiacum;
genomedb_acc GCF_000716715.1;
genomedb_target db:genomedb|GCF_000716715.1|WP_052386206.1 3 121 evalue:2.9e-26 qcov:80.40 identity:54.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id PWY-5284; PWY-6515; P3-PWY; PWY-6295; ECASYN-PWY; PWY-84; PWY-6438; THREOCAT-PWY; PWY-6411; PWY0-881; PWY-5987; PWY-5268; PWY-5140; PWY-5313; PWY-6404; PWY-6316; CENTBENZCOA-PWY; PWY-5400; PWY-5209; PWY-5965; PWY-5393; PWY-6412; KDO-LIPASYN-PWY; PWY-5972; PWY-5405; PWY-6318; PWY-5307; PWY-5437; PWY-5981; PWY-5477; LPSSYN-PWY; PWY1A0-6325; PWY-6432; PWYG-321; FASYN-INITIAL-PWY; PWY-6413; PWY-6113; PWY-6397; PWY1-3; PWY-6442; PWY-6312; PWY-6418; PWY-5184; BENZCOA-PWY; PWY-4801; KDO-NAGLIPASYN-PWY; PWY-6310; PWY-5139; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5080;
metacyc_pathway_name shisonin biosynthesis;; phloridzin biosynthesis;; gallate degradation III (anaerobic);; ; enterobacterial common antigen biosynthesis;; resveratrol biosynthesis;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; ginsenoside degradation I;; superpathway of fatty acid biosynthesis I (E. coli);; sorgoleone biosynthesis;; salvianin biosynthesis;; cannabinoid biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; aromatic polyketides biosynthesis;; benzoyl-CoA degradation II (anaerobic);; amaranthin biosynthesis;; methyl-coenzyme M oxidation to CO2;; fatty acid biosynthesis initiation III;; raspberry ketone biosynthesis;; ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; stearate biosynthesis I (animals and fungi);; superpathway of betalain biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; gentiodelphin biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; gallotannin biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; actinorhodin biosynthesis;; curcuminoid biosynthesis;; mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; ginsenoside degradation III;; superpathway of mycolate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; barbaloin biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; aloesone biosynthesis I;; superpathway of (Kdo)2-lipid A biosynthesis;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; sophorolipid biosynthesis;; very long chain fatty acid biosynthesis I;;
metacyc_pathway_type ANTHOCYANIN-SYN;; FLAVONOID-SYN;; GALLATE-DEG;; ; Lipopolysaccharide-Biosynthesis; Super-Pathways;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; Ginsenoside-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; QUINONE-SYN;; ANTHOCYANIN-SYN;; TERPENOPHENOLICS-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Benzoyl-CoA-Degradation;; BETALAIN-ALKALOIDS;; METHANOGENESIS;; Fatty-acid-biosynthesis;; POLYKETIDE-SYN;; Ginsenoside-Degradation;; Lipid-Biosynthesis;; Stearate-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; GALLOTANNINS;; Lipid-Biosynthesis; Super-Pathways;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOID-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; Cell-Wall-Biosynthesis;; Storage-Compounds-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; POLYKETIDE-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; POLYKETIDE-SYN;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis;;
pfam_acc PF00583; PF13673; PF13480; PF13508; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_6; Acetyltransf_7; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.7e-14 score:53.3 best_domain_score:53.0 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:3.9e-10 score:39.0 best_domain_score:38.7 name:Acetyltransf_10; db:Pfam-A.hmm|PF13480.7 evalue:2.1e-06 score:27.1 best_domain_score:27.1 name:Acetyltransf_6; db:Pfam-A.hmm|PF13508.7 evalue:1.1e-08 score:34.6 best_domain_score:34.1 name:Acetyltransf_7; db:Pfam-A.hmm|PF08445.10 evalue:1.4e-07 score:30.6 best_domain_score:30.1 name:FR47;
sprot_desc Acetyltransferase SG1711;
sprot_id sp|Q2NS89|Y1711_SODGM;
sprot_target db:uniprot_sprot|sp|Q2NS89|Y1711_SODGM 1 134 evalue:4.0e-19 qcov:90.50 identity:38.20;
69101 69850 CDS
ID metaerg.pl|03521
allgo_ids GO:0006281; GO:0006310;
allko_ids K03584;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668364.1 1 244 evalue:4.6e-93 qcov:98.00 identity:73.00;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF02565; PF11967;
pfam_desc Recombination protein O C terminal; Recombination protein O N terminal;
pfam_id RecO_C; RecO_N;
pfam_target db:Pfam-A.hmm|PF02565.15 evalue:3.5e-21 score:74.9 best_domain_score:74.5 name:RecO_C; db:Pfam-A.hmm|PF11967.8 evalue:1e-25 score:88.7 best_domain_score:88.1 name:RecO_N;
sprot_desc DNA repair protein RecO;
sprot_id sp|A4F9T9|RECO_SACEN;
sprot_target db:uniprot_sprot|sp|A4F9T9|RECO_SACEN 1 244 evalue:5.2e-43 qcov:98.00 identity:42.30;
tigrfam_acc TIGR00613;
tigrfam_desc DNA repair protein RecO;
tigrfam_mainrole DNA metabolism;
tigrfam_name reco;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00613 evalue:1.6e-36 score:125.1 best_domain_score:124.9 name:TIGR00613;
69921 70733 CDS
ID metaerg.pl|03522
allec_ids 2.5.1.88; 2.5.1.31;
allgo_ids GO:0016765; GO:0000287; GO:0004659;
allko_ids K21273;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668362.1 14 254 evalue:1.2e-99 qcov:89.30 identity:74.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id POLYISOPRENSYN-PWY; PWY-5785;
metacyc_pathway_name polyisoprenoid biosynthesis (E. coli);; di-trans,poly-cis-undecaprenyl phosphate biosynthesis;;
metacyc_pathway_type Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;;
pfam_acc PF01255;
pfam_desc Putative undecaprenyl diphosphate synthase;
pfam_id Prenyltransf;
pfam_target db:Pfam-A.hmm|PF01255.19 evalue:3.6e-71 score:238.5 best_domain_score:238.3 name:Prenyltransf;
sprot_desc Trans,polycis-polyprenyl diphosphate synthase ((2Z,6E)-farnesyl diphosphate specific);
sprot_id sp|Q47RM6|DPDP_THEFY;
sprot_target db:uniprot_sprot|sp|Q47RM6|DPDP_THEFY 4 259 evalue:9.8e-72 qcov:94.80 identity:53.10;
tigrfam_acc TIGR00055;
tigrfam_desc di-trans,poly-cis-decaprenylcistransferase;
tigrfam_mainrole Cell envelope;
tigrfam_name uppS;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00055 evalue:1.7e-70 score:236.1 best_domain_score:235.9 name:TIGR00055;
71598 70753 CDS
ID metaerg.pl|03523
allgo_ids GO:0005524; GO:0016887; GO:0015424;
allko_ids K10017; K02032; K02017; K11084; K02004; K09972; K02052; K02006; K02010; K05847; K01997; K02003; K02045; K11072; K02068; K02028; K10821; K10041; K02062; K10199; K06021; K02071; K06861; K01996; K11076; K02013; K10235; K05816; K10111; K01998; K10112; K02031; K02049; K02065; K01995; K11962; K02000; K10004; K10230; K02029; K10000; K02023; K10038; K10025; K02018; K02036; K10010; K09812; K10021; K10243; K01990;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Ilumatobacteraceae;g__Ilumatobacter;s__Ilumatobacter nonamiensis;
genomedb_acc GCF_000350145.1;
genomedb_target db:genomedb|GCF_000350145.1|WP_051063170.1 32 277 evalue:1.4e-103 qcov:87.50 identity:77.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF13304; PF09818; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; Predicted ATPase of the ABC class; ABC transporter;
pfam_id AAA_21; ABC_ATPase; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.3e-13 score:49.3 best_domain_score:31.2 name:AAA_21; db:Pfam-A.hmm|PF09818.9 evalue:0.00016 score:19.8 best_domain_score:12.0 name:ABC_ATPase; db:Pfam-A.hmm|PF00005.27 evalue:4.6e-34 score:117.1 best_domain_score:116.7 name:ABC_tran;
sprot_desc General L-amino acid transport ATP-binding protein AapP;
sprot_id sp|Q52815|AAPP_RHIL3;
sprot_target db:uniprot_sprot|sp|Q52815|AAPP_RHIL3 36 277 evalue:7.2e-94 qcov:86.10 identity:68.60;
72854 71595 CDS
ID metaerg.pl|03524
allgo_ids GO:0016020; GO:0055085; GO:0043190; GO:0022857; GO:0006865;
allko_ids K02029; K02030; K09971;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW15427.1 3 419 evalue:2.4e-118 qcov:99.50 identity:55.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:7.1e-21 score:74.0 best_domain_score:74.0 name:BPD_transp_1;
sprot_desc General L-amino acid transport system permease protein AapM;
sprot_id sp|Q52814|AAPM_RHIL3;
sprot_target db:uniprot_sprot|sp|Q52814|AAPM_RHIL3 17 419 evalue:6.0e-44 qcov:96.20 identity:31.70;
tigrfam_acc TIGR01726;
tigrfam_desc amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name HEQRo_perm_3TM;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01726 evalue:3.2e-17 score:62.1 best_domain_score:62.1 name:TIGR01726;
tm_num 9;
72854 71595 transmembrane_helix
ID metaerg.pl|03525
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology o71712-71780i71850-71918o72030-72098i72132-72200o72228-72296i72333-72401o72444-72512i72663-72716o72744-72803i;
74044 72854 CDS
ID metaerg.pl|03526
allgo_ids GO:0016020; GO:0055085; GO:0043190; GO:0022857; GO:0006865;
allko_ids K09970;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW15426.1 14 393 evalue:4.2e-101 qcov:96.00 identity:52.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.2e-12 score:45.4 best_domain_score:43.9 name:BPD_transp_1;
sprot_desc General L-amino acid transport system permease protein AapQ;
sprot_id sp|Q52813|AAPQ_RHIL3;
sprot_target db:uniprot_sprot|sp|Q52813|AAPQ_RHIL3 22 396 evalue:2.6e-57 qcov:94.70 identity:38.10;
tigrfam_acc TIGR01726;
tigrfam_desc amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name HEQRo_perm_3TM;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01726 evalue:1.7e-14 score:53.3 best_domain_score:50.9 name:TIGR01726;
tm_num 6;
74044 72854 transmembrane_helix
ID metaerg.pl|03527
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i72920-72988o73133-73201i73238-73306o73403-73471i73505-73573o73946-74014i;
75337 74159 CDS
ID metaerg.pl|03528
allgo_ids GO:0042597; GO:0006865;
allko_ids K09969; K02030;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW15425.1 25 391 evalue:4.2e-117 qcov:93.60 identity:59.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF09084; PF00497;
pfam_desc NMT1/THI5 like; Bacterial extracellular solute-binding proteins, family 3;
pfam_id NMT1; SBP_bac_3;
pfam_target db:Pfam-A.hmm|PF09084.11 evalue:1.6e-05 score:24.2 best_domain_score:16.9 name:NMT1; db:Pfam-A.hmm|PF00497.20 evalue:6e-32 score:110.1 best_domain_score:109.4 name:SBP_bac_3;
sp YES;
sprot_desc Putative amino-acid ABC transporter-binding protein YhdW;
sprot_id sp|P45766|YHDW_ECOLI;
sprot_target db:uniprot_sprot|sp|P45766|YHDW_ECOLI 84 392 evalue:4.0e-74 qcov:78.80 identity:46.90;
74159 74248 lipoprotein_signal_peptide
ID metaerg.pl|03529
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
76975 75647 CDS
ID metaerg.pl|03530
allgo_ids GO:0009058; GO:0030170; GO:0003677; GO:0003700; GO:0008483; GO:1901605; GO:0045892;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668359.1 1 442 evalue:2.2e-151 qcov:100.00 identity:64.30;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00155; PF12897; PF00392;
pfam_desc Aminotransferase class I and II; Alanine-glyoxylate amino-transferase; Bacterial regulatory proteins, gntR family;
pfam_id Aminotran_1_2; Aminotran_MocR; GntR;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:3.4e-19 score:68.5 best_domain_score:67.9 name:Aminotran_1_2; db:Pfam-A.hmm|PF12897.7 evalue:7.9e-05 score:20.8 best_domain_score:18.1 name:Aminotran_MocR; db:Pfam-A.hmm|PF00392.21 evalue:2.4e-12 score:45.5 best_domain_score:44.2 name:GntR;
sprot_desc Vitamin B6 salvage pathway transcriptional repressor PtsJ;
sprot_id sp|P40193|PTSJ_SALTY;
sprot_target db:uniprot_sprot|sp|P40193|PTSJ_SALTY 12 434 evalue:1.8e-62 qcov:95.70 identity:36.20;
77324 78409 CDS
ID metaerg.pl|03531
allgo_ids GO:0016020; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668358.1 2 308 evalue:1.4e-82 qcov:85.00 identity:56.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:4.7e-34 score:116.7 best_domain_score:67.1 name:EamA;
sprot_desc Uncharacterized inner membrane transporter YedA;
sprot_id sp|P0AA72|YEDA_ECO57;
sprot_target db:uniprot_sprot|sp|P0AA72|YEDA_ECO57 2 298 evalue:4.4e-35 qcov:82.30 identity:38.20;
tm_num 10;
77324 78409 transmembrane_helix
ID metaerg.pl|03532
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i77327-77395o77423-77476i77513-77581o77597-77665i77678-77731o77744-77803i77840-77908o77951-78019i78038-78097o78107-78175i;
78547 79743 CDS
ID metaerg.pl|03533
allko_ids K01183; K01179; K01225; K01448; K01181;
kegg_pathway_id 00500; 00530; 00550;
kegg_pathway_name Starch and sucrose metabolism; Aminosugars metabolism; Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00395;
pfam_desc S-layer homology domain;
pfam_id SLH;
pfam_target db:Pfam-A.hmm|PF00395.20 evalue:4.6e-16 score:57.8 best_domain_score:24.7 name:SLH;
sp YES;
tm_num 1;
78547 78660 signal_peptide
ID metaerg.pl|03534
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
78547 79743 transmembrane_helix
ID metaerg.pl|03535
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i78583-78642o;
80980 80108 CDS
ID metaerg.pl|03536
allgo_ids GO:0016491; GO:0055114; GO:0016620;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668357.1 1 289 evalue:5.6e-119 qcov:99.70 identity:76.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:4.3e-40 score:136.8 best_domain_score:136.6 name:Aldedh;
sprot_desc Aldehyde dehydrogenase family 16 member A1;
sprot_id sp|A6QR56|A16A1_BOVIN;
sprot_target db:uniprot_sprot|sp|A6QR56|A16A1_BOVIN 12 289 evalue:4.3e-25 qcov:95.90 identity:32.60;
82456 80984 CDS
ID metaerg.pl|03537
allec_ids 1.2.1.3;
allgo_ids GO:0016491; GO:0055114; GO:0004029; GO:0043878; GO:0006081;
allko_ids K00294; K00128; K09472; K00318; K13821;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668356.1 6 489 evalue:1.1e-252 qcov:98.80 identity:87.80;
kegg_pathway_id 00280; 00010; 00310; 00251; 00631; 00340; 00410; 00071; 00641; 00380; 00120; 00561; 00903; 00220; 00330; 00620; 00640; 00650;
kegg_pathway_name Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Lysine degradation; Glutamate metabolism; 1,2-Dichloroethane degradation; Histidine metabolism; beta-Alanine metabolism; Fatty acid metabolism; 3-Chloroacrylic acid degradation; Tryptophan metabolism; Bile acid biosynthesis; Glycerolipid metabolism; Limonene and pinene degradation; Urea cycle and metabolism of amino groups; Arginine and proline metabolism; Pyruvate metabolism; Propanoate metabolism; Butanoate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id NPGLUCAT-PWY; PWY-6055; PWY-6575; PWY-2501; PWY-3981; PWY-2221; PWY66-21; PWY-0; PWY-6054; PWY66-161; P221-PWY; PWY66-162; PWY-5760; PWY-2724;
metacyc_pathway_name Entner-Doudoroff pathway II (non-phosphorylative);; dimethylsulfoniopropanoate biosynthesis II (Spartina);; juvenile hormone III biosynthesis I;; fatty acid α-oxidation I;; β-alanine biosynthesis I;; Entner-Doudoroff pathway III (semi-phosphorylative);; ethanol degradation II;; putrescine degradation III;; dimethylsulfoniopropanoate biosynthesis I (Wollastonia);; ethanol degradation III;; octane oxidation;; ethanol degradation IV;; β-alanine biosynthesis IV;; alkane oxidation;;
metacyc_pathway_type Entner-Duodoroff-Pathways;; Dimethylsulfoniopropionate-Biosynthesis;; HORMONE-SYN; JH-III-Biosynthesis;; Fatty-Acid-Degradation;; Beta-Alanine-Biosynthesis;; Entner-Duodoroff-Pathways;; Ethanol-Degradation;; Putrescine-Degradation;; Dimethylsulfoniopropionate-Biosynthesis;; Ethanol-Degradation;; Other-Degradation;; Ethanol-Degradation;; Beta-Alanine-Biosynthesis;; Fatty-Acid-Degradation;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:6.4e-161 score:535.2 best_domain_score:534.9 name:Aldedh;
sprot_desc Putative aldehyde dehydrogenase DhaS;
sprot_id sp|O34660|ALDH4_BACSU;
sprot_target db:uniprot_sprot|sp|O34660|ALDH4_BACSU 28 484 evalue:2.8e-117 qcov:93.30 identity:46.80;
83444 82482 CDS
ID metaerg.pl|03538
allec_ids 4.1.2.4;
allgo_ids GO:0016829; GO:0005737; GO:0005634; GO:0004139; GO:0016052; GO:0046121; GO:0009264; GO:0046386;
allko_ids K01619;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668355.1 3 320 evalue:1.2e-133 qcov:99.40 identity:76.70;
kegg_pathway_id 00030;
kegg_pathway_name Pentose phosphate pathway;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id PWY0-1297; PWY0-1298;
metacyc_pathway_name superpathway of purine deoxyribonucleosides degradation;; superpathway of pyrimidine deoxyribonucleosides degradation;;
metacyc_pathway_type NUCLEO-DEG; Super-Pathways;; Pyrimidine-Degradation; Super-Pathways;;
pfam_acc PF01791;
pfam_desc DeoC/LacD family aldolase;
pfam_id DeoC;
pfam_target db:Pfam-A.hmm|PF01791.9 evalue:1.2e-23 score:83.2 best_domain_score:82.9 name:DeoC;
sprot_desc Deoxyribose-phosphate aldolase;
sprot_id sp|Q91YP3|DEOC_MOUSE;
sprot_target db:uniprot_sprot|sp|Q91YP3|DEOC_MOUSE 33 311 evalue:5.6e-58 qcov:87.20 identity:46.90;
tigrfam_acc TIGR00126;
tigrfam_desc deoxyribose-phosphate aldolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name deoC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00126 evalue:9.4e-51 score:171.4 best_domain_score:171.0 name:TIGR00126;
83742 84890 CDS
ID metaerg.pl|03539
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Palsa-465;s__Palsa-465 sp003244035;
genomedb_acc GCA_003244035.1;
genomedb_target db:genomedb|GCA_003244035.1|PZS08313.1 20 364 evalue:1.7e-91 qcov:90.30 identity:50.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
sp YES;
83742 83795 signal_peptide
ID metaerg.pl|03540
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
84887 86419 CDS
ID metaerg.pl|03541
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441353.1 1 507 evalue:4.3e-231 qcov:99.40 identity:78.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01593; PF01266; PF00890; PF01494; PF12831; PF13450;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; FAD binding domain; FAD dependent oxidoreductase; NAD(P)-binding Rossmann-like domain;
pfam_id Amino_oxidase; DAO; FAD_binding_2; FAD_binding_3; FAD_oxidored; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:1.6e-15 score:56.6 best_domain_score:34.2 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:3.3e-08 score:32.7 best_domain_score:28.8 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.5e-09 score:36.7 best_domain_score:28.5 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:3.4e-05 score:22.5 best_domain_score:21.7 name:FAD_binding_3; db:Pfam-A.hmm|PF12831.7 evalue:2.3e-08 score:33.1 best_domain_score:31.4 name:FAD_oxidored; db:Pfam-A.hmm|PF13450.6 evalue:3e-11 score:42.6 best_domain_score:40.4 name:NAD_binding_8;
sprot_desc hypothetical protein;
sprot_id sp|P06108|P49_STRLI;
sprot_target db:uniprot_sprot|sp|P06108|P49_STRLI 7 499 evalue:4.2e-84 qcov:96.70 identity:41.40;
86747 86475 CDS
ID metaerg.pl|03542
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669482.1 1 90 evalue:4.6e-35 qcov:100.00 identity:82.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01713;
pfam_desc Smr domain;
pfam_id Smr;
pfam_target db:Pfam-A.hmm|PF01713.21 evalue:1.9e-13 score:49.8 best_domain_score:49.6 name:Smr;
87550 86807 CDS
ID metaerg.pl|03543
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__PALSA-555;g__PALSA-555;s__PALSA-555 sp003140175;
genomedb_acc GCA_003140175.1;
genomedb_target db:genomedb|GCA_003140175.1|PLJD01000051.1_12 64 243 evalue:7.2e-06 qcov:72.90 identity:25.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
sp YES;
86807 86884 lipoprotein_signal_peptide
ID metaerg.pl|03544
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
88299 87706 CDS
ID metaerg.pl|03545
allgo_ids GO:0008168;
allko_ids K00599; K03183;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Saccharopolyspora;s__Saccharopolyspora shandongensis;
genomedb_acc GCF_900106995.1;
genomedb_target db:genomedb|GCF_900106995.1|WP_093266201.1 16 192 evalue:7.1e-57 qcov:89.80 identity:64.00;
kegg_pathway_id 00626; 00450; 00350; 00130; 00150; 00380; 00340;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tyrosine metabolism; Ubiquinone biosynthesis; Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01739; PF08241; PF08242; PF13489; PF13649; PF13847; PF05175; PF05401; PF03848;
pfam_desc CheR methyltransferase, SAM binding domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain; Nodulation protein S (NodS); Tellurite resistance protein TehB;
pfam_id CheR; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; MTS; NodS; TehB;
pfam_target db:Pfam-A.hmm|PF01739.18 evalue:6.6e-05 score:21.7 best_domain_score:9.8 name:CheR; db:Pfam-A.hmm|PF08241.12 evalue:4.3e-13 score:49.0 best_domain_score:48.5 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:6.4e-10 score:38.9 best_domain_score:38.3 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:2.9e-07 score:29.7 best_domain_score:29.4 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:9.7e-17 score:60.7 best_domain_score:60.1 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:3.9e-09 score:35.7 best_domain_score:34.7 name:Methyltransf_31; db:Pfam-A.hmm|PF05175.14 evalue:1.1e-05 score:24.3 best_domain_score:23.8 name:MTS; db:Pfam-A.hmm|PF05401.11 evalue:0.00014 score:20.7 best_domain_score:20.4 name:NodS; db:Pfam-A.hmm|PF03848.14 evalue:5.8e-06 score:25.1 best_domain_score:24.6 name:TehB;
88661 88296 CDS
ID metaerg.pl|03546
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
tm_num 3;
88661 88296 transmembrane_helix
ID metaerg.pl|03547
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i88356-88424o88452-88511i88596-88655o;
90637 88862 CDS
ID metaerg.pl|03548
allec_ids 6.3.5.7;
allgo_ids GO:0030956; GO:0004040; GO:0005524; GO:0050567; GO:0006412;
allko_ids K02433;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax sp002337465;
genomedb_acc GCA_002337465.1;
genomedb_target db:genomedb|GCA_002337465.1|DDGB01000005.1_241 32 560 evalue:9.3e-145 qcov:89.50 identity:53.90;
kegg_pathway_id 00251; 00252;
kegg_pathway_name Glutamate metabolism; Alanine and aspartate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id PWY-5921;
metacyc_pathway_name glutaminyl-tRNAgln biosynthesis via transamidation;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging;;
pfam_acc PF01425;
pfam_desc Amidase;
pfam_id Amidase;
pfam_target db:Pfam-A.hmm|PF01425.21 evalue:4.2e-88 score:295.5 best_domain_score:294.0 name:Amidase;
sp YES;
sprot_desc Glutamyl-tRNA(Gln) amidotransferase subunit A;
sprot_id sp|Q2RGY4|GATA_MOOTA;
sprot_target db:uniprot_sprot|sp|Q2RGY4|GATA_MOOTA 61 544 evalue:1.0e-44 qcov:81.90 identity:30.60;
88862 88939 signal_peptide
ID metaerg.pl|03549
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
91008 92393 CDS
ID metaerg.pl|03550
allec_ids 6.1.1.14;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004820; GO:0046983; GO:0006426;
allko_ids K01880;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669911.1 1 458 evalue:9.2e-241 qcov:99.30 identity:86.50;
kegg_pathway_id 00260; 00970;
kegg_pathway_name Glycine, serine and threonine metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03129; PF00587;
pfam_desc Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T);
pfam_id HGTP_anticodon; tRNA-synt_2b;
pfam_target db:Pfam-A.hmm|PF03129.20 evalue:1e-21 score:76.1 best_domain_score:75.0 name:HGTP_anticodon; db:Pfam-A.hmm|PF00587.25 evalue:2.9e-07 score:29.9 best_domain_score:29.1 name:tRNA-synt_2b;
sprot_desc Glycine--tRNA ligase;
sprot_id sp|Q6A964|SYG_CUTAK;
sprot_target db:uniprot_sprot|sp|Q6A964|SYG_CUTAK 5 461 evalue:1.9e-171 qcov:99.10 identity:60.60;
tigrfam_acc TIGR00389;
tigrfam_desc glycine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name glyS_dimeric;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00389 evalue:2.8e-149 score:497.4 best_domain_score:268.5 name:TIGR00389;
92451 93329 CDS
ID metaerg.pl|03551
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
tm_num 7;
92451 93329 transmembrane_helix
ID metaerg.pl|03552
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i92463-92531o92574-92642i92667-92735o92778-92837i92874-92927o92985-93053i93165-93233o;
93582 93256 CDS
ID metaerg.pl|03553
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668350.1 1 91 evalue:1.6e-18 qcov:84.30 identity:51.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
tm_num 2;
93582 93256 transmembrane_helix
ID metaerg.pl|03554
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i93292-93360o93388-93456i;
93679 94074 CDS
ID metaerg.pl|03555
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668349.1 11 131 evalue:6.7e-27 qcov:92.40 identity:59.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
95035 94019 CDS
ID metaerg.pl|03556
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
96510 95032 CDS
ID metaerg.pl|03557
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
tm_num 2;
96510 95032 transmembrane_helix
ID metaerg.pl|03558
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i95746-95814o95842-95910i;
96881 96507 CDS
ID metaerg.pl|03559
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
97070 98458 CDS
ID metaerg.pl|03560
allec_ids 5.3.1.8;
allgo_ids GO:0004476; GO:0005975; GO:0008270; GO:0005829; GO:0009242; GO:0009298; GO:0019309;
allko_ids K01809;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442279.1 8 438 evalue:2.1e-91 qcov:93.30 identity:48.00;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id COLANSYN-PWY; PWY-5659; PWY-882; MANNCAT-PWY;
metacyc_pathway_name colanic acid building blocks biosynthesis;; GDP-mannose biosynthesis;; L-ascorbate biosynthesis I (L-galactose pathway);; D-mannose degradation;;
metacyc_pathway_type Carbohydrates-Biosynthesis; Super-Pathways;; GDP-Sugar-Biosynthesis;; Ascorbate-Biosynthesis;; Sugars-And-Polysaccharides-Degradation;;
pfam_acc PF01238;
pfam_desc Phosphomannose isomerase type I;
pfam_id PMI_typeI;
pfam_target db:Pfam-A.hmm|PF01238.21 evalue:7.6e-54 score:182.5 best_domain_score:106.1 name:PMI_typeI;
sprot_desc Mannose-6-phosphate isomerase;
sprot_id sp|P00946|MANA_ECOLI;
sprot_target db:uniprot_sprot|sp|P00946|MANA_ECOLI 7 337 evalue:5.1e-44 qcov:71.60 identity:35.00;
tigrfam_acc TIGR00218;
tigrfam_desc mannose-6-phosphate isomerase, class I;
tigrfam_mainrole Energy metabolism;
tigrfam_name manA;
tigrfam_sub1role Sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR00218 evalue:5e-56 score:189.5 best_domain_score:187.7 name:TIGR00218;
100240 98459 CDS
ID metaerg.pl|03561
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441858.1 10 587 evalue:3.4e-211 qcov:97.50 identity:62.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF13180; PF17820; PF05299; PF17899;
pfam_desc PDZ domain; PDZ domain; M61 glycyl aminopeptidase; Peptidase M61 N-terminal domain;
pfam_id PDZ_2; PDZ_6; Peptidase_M61; Peptidase_M61_N;
pfam_target db:Pfam-A.hmm|PF13180.6 evalue:2.1e-10 score:40.0 best_domain_score:38.8 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:3.4e-08 score:32.4 best_domain_score:31.1 name:PDZ_6; db:Pfam-A.hmm|PF05299.12 evalue:1.6e-37 score:127.7 best_domain_score:127.1 name:Peptidase_M61; db:Pfam-A.hmm|PF17899.1 evalue:1.1e-36 score:125.7 best_domain_score:125.3 name:Peptidase_M61_N;
100326 100757 CDS
ID metaerg.pl|03562
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669908.1 6 143 evalue:2.7e-50 qcov:96.50 identity:73.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF11349;
pfam_desc Protein of unknown function (DUF3151);
pfam_id DUF3151;
pfam_target db:Pfam-A.hmm|PF11349.8 evalue:1.1e-33 score:115.2 best_domain_score:115.1 name:DUF3151;
100853 102715 CDS
ID metaerg.pl|03563
allec_ids 2.7.7.-;
allgo_ids GO:0016779; GO:0005737; GO:1990077; GO:0003677; GO:0003896; GO:0008270; GO:0006269;
allko_ids K02316;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668343.1 1 616 evalue:7.5e-238 qcov:99.40 identity:67.80;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
metacyc_pathway_id PWY-5354; THISYN-PWY; PWY-882; PWY4FS-4; PWY-6476; PHOSLIPSYN2-PWY;
metacyc_pathway_name ; superpathway of thiamine diphosphate biosynthesis I;; L-ascorbate biosynthesis I (L-galactose pathway);; phosphatidylcholine biosynthesis IV;; cytidylyl molybdenum cofactor biosynthesis;; superpathway of phospholipid biosynthesis II (plants);;
metacyc_pathway_type ; Super-Pathways; Thiamine-Biosynthesis;; Ascorbate-Biosynthesis;; PhosphatidylcholineBiosynthesis;; Cofactor-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;;
pfam_acc PF10410; PF01751; PF13155; PF13362; PF13662; PF08275; PF01807;
pfam_desc DnaB-helicase binding domain of primase; Toprim domain; Toprim-like; Toprim domain; Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger;
pfam_id DnaB_bind; Toprim; Toprim_2; Toprim_3; Toprim_4; Toprim_N; zf-CHC2;
pfam_target db:Pfam-A.hmm|PF10410.9 evalue:5.6e-05 score:22.5 best_domain_score:20.5 name:DnaB_bind; db:Pfam-A.hmm|PF01751.22 evalue:1.5e-09 score:37.3 best_domain_score:36.3 name:Toprim; db:Pfam-A.hmm|PF13155.6 evalue:3.2e-15 score:55.6 best_domain_score:54.6 name:Toprim_2; db:Pfam-A.hmm|PF13362.6 evalue:8e-09 score:35.0 best_domain_score:34.1 name:Toprim_3; db:Pfam-A.hmm|PF13662.6 evalue:7.5e-19 score:67.2 best_domain_score:66.1 name:Toprim_4; db:Pfam-A.hmm|PF08275.11 evalue:2.5e-37 score:127.0 best_domain_score:126.0 name:Toprim_N; db:Pfam-A.hmm|PF01807.20 evalue:1.7e-34 score:116.8 best_domain_score:115.6 name:zf-CHC2;
sprot_desc DNA primase;
sprot_id sp|Q9S1N4|DNAG_STRCO;
sprot_target db:uniprot_sprot|sp|Q9S1N4|DNAG_STRCO 1 615 evalue:2.5e-94 qcov:99.20 identity:38.20;
tigrfam_acc TIGR01391;
tigrfam_desc DNA primase;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnaG;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01391 evalue:7.4e-120 score:399.7 best_domain_score:399.3 name:TIGR01391;
103209 104690 CDS
ID metaerg.pl|03564
allgo_ids GO:0003677; GO:0003700; GO:0006352; GO:0006355; GO:0016987;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442278.1 123 493 evalue:3.9e-144 qcov:75.30 identity:76.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00140; PF04542; PF04539; PF04545;
pfam_desc Sigma-70 factor, region 1.2; Sigma-70 region 2 ; Sigma-70 region 3; Sigma-70, region 4;
pfam_id Sigma70_r1_2; Sigma70_r2; Sigma70_r3; Sigma70_r4;
pfam_target db:Pfam-A.hmm|PF00140.20 evalue:2.3e-12 score:45.9 best_domain_score:44.6 name:Sigma70_r1_2; db:Pfam-A.hmm|PF04542.14 evalue:2.9e-22 score:77.5 best_domain_score:76.5 name:Sigma70_r2; db:Pfam-A.hmm|PF04539.16 evalue:3.2e-24 score:84.0 best_domain_score:82.1 name:Sigma70_r3; db:Pfam-A.hmm|PF04545.16 evalue:6.2e-20 score:69.7 best_domain_score:68.2 name:Sigma70_r4;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:4.6e-37 score:126.3 best_domain_score:125.7 name:TIGR02937;
104857 106359 CDS
ID metaerg.pl|03565
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665294.1 1 472 evalue:2.2e-147 qcov:94.40 identity:61.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
106439 107425 CDS
ID metaerg.pl|03566
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668342.1 36 322 evalue:7.4e-43 qcov:87.50 identity:42.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
107854 108831 CDS
ID metaerg.pl|03567
allko_ids K01181; K01225; K01448; K01183; K01179;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441682.1 1 325 evalue:6.6e-84 qcov:100.00 identity:54.80;
kegg_pathway_id 00550; 00500; 00530;
kegg_pathway_name Peptidoglycan biosynthesis; Starch and sucrose metabolism; Aminosugars metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00395; PF06737;
pfam_desc S-layer homology domain; Transglycosylase-like domain;
pfam_id SLH; Transglycosylas;
pfam_target db:Pfam-A.hmm|PF00395.20 evalue:1e-16 score:59.9 best_domain_score:26.4 name:SLH; db:Pfam-A.hmm|PF06737.14 evalue:5.3e-32 score:109.5 best_domain_score:108.4 name:Transglycosylas;
sp YES;
tm_num 1;
107854 107961 signal_peptide
ID metaerg.pl|03568
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
107854 108831 transmembrane_helix
ID metaerg.pl|03569
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i107887-107955o;
108933 109895 CDS
ID metaerg.pl|03570
allgo_ids GO:0055114;
allko_ids K00001;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668337.1 1 320 evalue:1.8e-126 qcov:100.00 identity:71.90;
kegg_pathway_id 00641; 00010; 00624; 00120; 00350; 00071;
kegg_pathway_name 3-Chloroacrylic acid degradation; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; Bile acid biosynthesis; Tyrosine metabolism; Fatty acid metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF08240; PF00107; PF13602;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N; ADH_zinc_N_2;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:3e-05 score:23.1 best_domain_score:16.0 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:6.3e-24 score:83.6 best_domain_score:82.5 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:9.8e-20 score:71.2 best_domain_score:70.1 name:ADH_zinc_N_2;
110115 110040 tRNA
ID metaerg.pl|03571
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
name tRNA_Asn_gtt;
110282 110668 CDS
ID metaerg.pl|03572
allko_ids K12526; K01653; K00058; K00951; K12524; K00003; K00928;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668331.1 1 124 evalue:1.3e-43 qcov:96.90 identity:77.40;
kegg_pathway_id 00290; 00770; 00300; 00230; 00660; 00650; 00260;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis; Lysine biosynthesis; Purine metabolism; C5-Branched dibasic acid metabolism; Butanoate metabolism; Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01842; PF13840;
pfam_desc ACT domain; ACT domain;
pfam_id ACT; ACT_7;
pfam_target db:Pfam-A.hmm|PF01842.25 evalue:2.2e-13 score:49.0 best_domain_score:25.6 name:ACT; db:Pfam-A.hmm|PF13840.6 evalue:3.3e-07 score:29.2 best_domain_score:18.4 name:ACT_7;
111294 110686 CDS
ID metaerg.pl|03573
allgo_ids GO:0015035;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668330.1 1 200 evalue:3.6e-64 qcov:99.00 identity:62.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01323;
pfam_desc DSBA-like thioredoxin domain;
pfam_id DSBA;
pfam_target db:Pfam-A.hmm|PF01323.20 evalue:1.9e-15 score:56.4 best_domain_score:53.2 name:DSBA;
111928 111515 CDS
ID metaerg.pl|03574
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668329.1 1 137 evalue:1.8e-46 qcov:100.00 identity:67.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
tm_num 3;
111928 111515 transmembrane_helix
ID metaerg.pl|03575
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i111533-111601o111629-111697i111731-111799o;
112793 112002 CDS
ID metaerg.pl|03576
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442276.1 12 262 evalue:1.1e-86 qcov:95.40 identity:69.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01145;
pfam_desc SPFH domain / Band 7 family;
pfam_id Band_7;
pfam_target db:Pfam-A.hmm|PF01145.25 evalue:2.4e-32 score:111.6 best_domain_score:111.2 name:Band_7;
sprot_desc hypothetical protein;
sprot_id sp|O28852|Y1420_ARCFU;
sprot_target db:uniprot_sprot|sp|O28852|Y1420_ARCFU 15 247 evalue:1.2e-66 qcov:88.60 identity:54.90;
tm_num 1;
112793 112002 transmembrane_helix
ID metaerg.pl|03577
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i112020-112088o;
114166 112832 CDS
ID metaerg.pl|03578
allec_ids 3.4.21.-;
allgo_ids GO:0016021; GO:0008236;
allko_ids K07403;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668328.1 7 439 evalue:8.9e-124 qcov:97.50 identity:57.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01957;
pfam_desc NfeD-like C-terminal, partner-binding;
pfam_id NfeD;
pfam_target db:Pfam-A.hmm|PF01957.18 evalue:1.9e-11 score:43.4 best_domain_score:41.6 name:NfeD;
sp YES;
sprot_desc Membrane-bound protease PH1510;
sprot_id sp|O59179|STOPP_PYRHO;
sprot_target db:uniprot_sprot|sp|O59179|STOPP_PYRHO 27 441 evalue:2.4e-43 qcov:93.50 identity:32.20;
tm_num 5;
112832 112936 signal_peptide
ID metaerg.pl|03579
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
114166 112832 transmembrane_helix
ID metaerg.pl|03580
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology o112874-112933i113573-113641o113684-113752i113771-113839o113867-113935i;
114310 114615 CDS
ID metaerg.pl|03581
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669905.1 1 96 evalue:3.1e-24 qcov:95.00 identity:64.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF01910; PF07615;
pfam_desc Thiamine-binding protein; YKOF-related Family;
pfam_id Thiamine_BP; Ykof;
pfam_target db:Pfam-A.hmm|PF01910.17 evalue:1.3e-24 score:85.2 best_domain_score:85.0 name:Thiamine_BP; db:Pfam-A.hmm|PF07615.11 evalue:1.5e-06 score:27.8 best_domain_score:27.5 name:Ykof;
sprot_desc hypothetical protein;
sprot_id sp|P9WFQ0|Y1898_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WFQ0|Y1898_MYCTO 1 95 evalue:2.0e-17 qcov:94.10 identity:52.10;
115595 114546 CDS
ID metaerg.pl|03582
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441857.1 10 320 evalue:1.0e-106 qcov:89.10 identity:67.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:4.3e-28 score:97.4 best_domain_score:55.2 name:EamA;
tm_num 10;
115595 114546 transmembrane_helix
ID metaerg.pl|03583
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
topology i114618-114686o114714-114767i114804-114872o114885-114953i114972-115025o115068-115136i115155-115223o115266-115334i115353-115406o115416-115469i;
115928 116308 CDS
ID metaerg.pl|03584
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
sp YES;
115928 116044 signal_peptide
ID metaerg.pl|03585
Note TAT;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 25.034; 0.0988301; 0.126051; 24.7164; 0.092623;
>Feature NODE_19_length_114209_cov_55.1989
1438 197 CDS
ID metaerg.pl|03586
allgo_ids GO:0016746;
allko_ids K13512; K13510;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF01553;
pfam_desc Acyltransferase;
pfam_id Acyltransferase;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:4.9e-27 score:93.4 best_domain_score:92.9 name:Acyltransferase;
2308 1454 CDS
ID metaerg.pl|03587
allgo_ids GO:0016746;
allko_ids K13510; K13512;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666295.1 4 260 evalue:1.1e-82 qcov:90.50 identity:63.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF01553;
pfam_desc Acyltransferase;
pfam_id Acyltransferase;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:2.5e-28 score:97.6 best_domain_score:96.5 name:Acyltransferase;
3599 2403 CDS
ID metaerg.pl|03588
allec_ids 2.6.1.13;
allgo_ids GO:0008483; GO:0030170; GO:0005737; GO:0004587; GO:0006525; GO:0055129;
allko_ids K00819; K00821; K05830; K00818;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665020.1 4 397 evalue:2.5e-157 qcov:99.00 identity:72.60;
kegg_pathway_id 00300; 00330; 00220;
kegg_pathway_name Lysine biosynthesis; Arginine and proline metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id ARG-PRO-PWY; ARGININE-SYN4-PWY; CITRULBIO-PWY; PWY-4981; ARGORNPROST-PWY; PWY-3341; PWY-5004;
metacyc_pathway_name L-arginine degradation VI (arginase 2 pathway);; L-ornithine biosynthesis II;; L-citrulline biosynthesis;; L-proline biosynthesis II (from arginine);; L-arginine degradation (Stickland reaction);; L-proline biosynthesis III;; superpathway of L-citrulline metabolism;;
metacyc_pathway_type ARGININE-DEG; PROLINE-SYN;; L-Ornithine-Biosynthesis;; Citrulline-Biosynthesis;; PROLINE-SYN;; ARGININE-DEG; Super-Pathways;; PROLINE-SYN;; Citrulline-Biosynthesis; Super-Pathways;;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:5.3e-114 score:380.2 best_domain_score:380.0 name:Aminotran_3;
sprot_desc Ornithine aminotransferase;
sprot_id sp|P38021|OAT_BACSU;
sprot_target db:uniprot_sprot|sp|P38021|OAT_BACSU 14 397 evalue:3.9e-125 qcov:96.50 identity:56.00;
tigrfam_acc TIGR01885;
tigrfam_desc ornithine--oxo-acid transaminase;
tigrfam_name Orn_aminotrans;
tigrfam_target db:TIGRFAMs.hmm|TIGR01885 evalue:9.1e-141 score:468.4 best_domain_score:468.1 name:TIGR01885;
4821 3703 CDS
ID metaerg.pl|03589
allec_ids 2.6.1.51;
allgo_ids GO:0005777; GO:0008453; GO:0004760; GO:0019265; GO:0046487;
allko_ids K00839; K00830;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108667910.1 9 370 evalue:2.6e-124 qcov:97.30 identity:61.30;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF00266;
pfam_desc Aminotransferase class-V;
pfam_id Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:1.5e-32 score:112.2 best_domain_score:111.9 name:Aminotran_5;
sprot_desc Serine--pyruvate aminotransferase;
sprot_id sp|Q54GT6|SPYA_DICDI;
sprot_target db:uniprot_sprot|sp|Q54GT6|SPYA_DICDI 10 371 evalue:4.3e-70 qcov:97.30 identity:38.30;
5145 6530 CDS
ID metaerg.pl|03590
allgo_ids GO:0006814; GO:0015655; GO:0016020; GO:0032328; GO:0016021; GO:0005886;
allko_ids K03310;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Thermobispora;s__Thermobispora bispora;
genomedb_acc GCF_000092645.1;
genomedb_target db:genomedb|GCF_000092645.1|WP_013130400.1 4 452 evalue:1.6e-179 qcov:97.40 identity:73.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF01235;
pfam_desc Sodium:alanine symporter family;
pfam_id Na_Ala_symp;
pfam_target db:Pfam-A.hmm|PF01235.17 evalue:2.7e-134 score:447.6 best_domain_score:447.3 name:Na_Ala_symp;
sprot_desc Sodium/alanine symporter AgcS;
sprot_id sp|Q6LX42|AGCS_METMP;
sprot_target db:uniprot_sprot|sp|Q6LX42|AGCS_METMP 15 445 evalue:3.7e-111 qcov:93.50 identity:53.00;
tigrfam_acc TIGR00835;
tigrfam_desc amino acid carrier protein;
tigrfam_name agcS;
tigrfam_target db:TIGRFAMs.hmm|TIGR00835 evalue:8e-140 score:465.6 best_domain_score:465.4 name:TIGR00835;
tm_num 11;
5145 6530 transmembrane_helix
ID metaerg.pl|03591
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology o5187-5255i5352-5420o5433-5501i5583-5651o5694-5762i5781-5849o5892-5960i6075-6143o6201-6269i6294-6362o6405-6461i;
7146 6619 CDS
ID metaerg.pl|03592
allec_ids 2.2.1.6;
allgo_ids GO:0003984; GO:1990610; GO:0009097; GO:0009099;
allko_ids K00928; K01653;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666289.1 4 175 evalue:6.7e-67 qcov:98.30 identity:78.50;
kegg_pathway_id 00290; 00660; 00650; 00260; 00300; 00770;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; C5-Branched dibasic acid metabolism; Butanoate metabolism; Glycine, serine and threonine metabolism; Lysine biosynthesis; Pantothenate and CoA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY-5939; ILEUSYN-PWY; PWY-6389; PWY-5104; BRANCHED-CHAIN-AA-SYN-PWY; PWY-6396; PWY-5103; PWY-5938; THREOCAT-PWY; PWY-3001; VALSYN-PWY; PWY-5101;
metacyc_pathway_name pyruvate fermentation to (R)-acetoin II;; L-isoleucine biosynthesis I (from threonine);; pyruvate fermentation to (S)-acetoin;; L-isoleucine biosynthesis IV;; superpathway of branched chain amino acid biosynthesis;; superpathway of 2,3-butanediol biosynthesis;; L-isoleucine biosynthesis III;; pyruvate fermentation to (R)-acetoin I;; superpathway of L-threonine metabolism;; superpathway of L-isoleucine biosynthesis I;; L-valine biosynthesis;; L-isoleucine biosynthesis II;;
metacyc_pathway_type Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; Butanediol-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN; Super-Pathways;; VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;;
pfam_acc PF01842; PF13291; PF13710; PF10369;
pfam_desc ACT domain; ACT domain; ACT domain; Small subunit of acetolactate synthase;
pfam_id ACT; ACT_4; ACT_5; ALS_ss_C;
pfam_target db:Pfam-A.hmm|PF01842.25 evalue:4.8e-16 score:57.5 best_domain_score:56.1 name:ACT; db:Pfam-A.hmm|PF13291.6 evalue:1.1e-06 score:28.3 best_domain_score:26.9 name:ACT_4; db:Pfam-A.hmm|PF13710.6 evalue:1.4e-16 score:59.3 best_domain_score:57.5 name:ACT_5; db:Pfam-A.hmm|PF10369.9 evalue:8.2e-30 score:102.1 best_domain_score:100.3 name:ALS_ss_C;
sprot_desc Acetolactate synthase small subunit;
sprot_id sp|A0QUX7|ILVH_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QUX7|ILVH_MYCS2 5 163 evalue:2.2e-48 qcov:90.90 identity:61.60;
tigrfam_acc TIGR00119;
tigrfam_desc acetolactate synthase, small subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name acolac_sm;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00119 evalue:2e-62 score:209.0 best_domain_score:208.8 name:TIGR00119;
9035 7143 CDS
ID metaerg.pl|03593
allec_ids 2.2.1.6;
allgo_ids GO:0003824; GO:0030976; GO:0003984; GO:0050660; GO:0000287; GO:0009097; GO:0009099;
allko_ids K01576; K01568; K04103; K12253; K01652; K12732; K03852; K01637;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441462.1 3 597 evalue:1.5e-278 qcov:94.40 identity:80.70;
kegg_pathway_id 00430; 00770; 00380; 00010; 00290; 00622; 00660; 00650; 00630; 00362;
kegg_pathway_name Taurine and hypotaurine metabolism; Pantothenate and CoA biosynthesis; Tryptophan metabolism; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine biosynthesis; Toluene and xylene degradation; C5-Branched dibasic acid metabolism; Butanoate metabolism; Glyoxylate and dicarboxylate metabolism; Benzoate degradation via hydroxylation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id VALSYN-PWY; PWY-5101; PWY-5938; THREOCAT-PWY; PWY-3001; PWY-6389; BRANCHED-CHAIN-AA-SYN-PWY; PWY-5104; PWY-5103; PWY-6396; ILEUSYN-PWY; PWY-5939;
metacyc_pathway_name L-valine biosynthesis;; L-isoleucine biosynthesis II;; pyruvate fermentation to (R)-acetoin I;; superpathway of L-threonine metabolism;; superpathway of L-isoleucine biosynthesis I;; pyruvate fermentation to (S)-acetoin;; superpathway of branched chain amino acid biosynthesis;; L-isoleucine biosynthesis IV;; L-isoleucine biosynthesis III;; superpathway of 2,3-butanediol biosynthesis;; L-isoleucine biosynthesis I (from threonine);; pyruvate fermentation to (R)-acetoin II;;
metacyc_pathway_type VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN; Super-Pathways;; Acetoin-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; Butanediol-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;;
pfam_acc PF02775; PF00205; PF02776;
pfam_desc Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain;
pfam_id TPP_enzyme_C; TPP_enzyme_M; TPP_enzyme_N;
pfam_target db:Pfam-A.hmm|PF02775.21 evalue:8.8e-49 score:164.4 best_domain_score:162.3 name:TPP_enzyme_C; db:Pfam-A.hmm|PF00205.22 evalue:3.8e-51 score:171.6 best_domain_score:169.7 name:TPP_enzyme_M; db:Pfam-A.hmm|PF02776.18 evalue:2.7e-55 score:185.8 best_domain_score:185.8 name:TPP_enzyme_N;
sprot_desc Acetolactate synthase large subunit IlvB1;
sprot_id sp|P9WG40|ILVB1_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WG40|ILVB1_MYCTO 2 567 evalue:5.8e-184 qcov:89.80 identity:57.90;
tigrfam_acc TIGR00118;
tigrfam_desc acetolactate synthase, large subunit, biosynthetic type;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name acolac_lg;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00118 evalue:6.8e-228 score:756.8 best_domain_score:756.6 name:TIGR00118;
11292 9400 CDS
ID metaerg.pl|03594
allec_ids 2.2.1.7;
allgo_ids GO:0008661; GO:0016114; GO:0000287; GO:0030976; GO:0052865; GO:0009228;
allko_ids K00615; K00163; K00161; K01662;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666288.1 1 628 evalue:2.5e-249 qcov:99.70 identity:71.00;
kegg_pathway_id 00650; 00620; 01051; 00252; 00100; 00020; 00010; 00710; 00030; 00290;
kegg_pathway_name Butanoate metabolism; Pyruvate metabolism; Biosynthesis of ansamycins; Alanine and aspartate metabolism; Biosynthesis of steroids; Citrate cycle (TCA cycle); Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Pentose phosphate pathway; Valine, leucine and isoleucine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY-6270; THISYN-PWY; NONMEVIPP-PWY; PYRIDOXSYN-PWY; PWY-5121; PWY0-845;
metacyc_pathway_name isoprene biosynthesis I;; superpathway of thiamine diphosphate biosynthesis I;; methylerythritol phosphate pathway I;; pyridoxal 5'-phosphate biosynthesis I;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;;
metacyc_pathway_type ISOPRENOIDS; Super-Pathways;; Super-Pathways; Thiamine-Biosynthesis;; MEP-Pathways;; Vitamin-B6-Biosynthesis;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; Super-Pathways; Vitamin-B6-Biosynthesis;;
pfam_acc PF13292; PF02775; PF02780; PF00456; PF02779;
pfam_desc 1-deoxy-D-xylulose-5-phosphate synthase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Transketolase, C-terminal domain; Transketolase, thiamine diphosphate binding domain; Transketolase, pyrimidine binding domain;
pfam_id DXP_synthase_N; TPP_enzyme_C; Transketolase_C; Transketolase_N; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF13292.6 evalue:5.3e-97 score:323.5 best_domain_score:323.1 name:DXP_synthase_N; db:Pfam-A.hmm|PF02775.21 evalue:2e-06 score:26.9 best_domain_score:22.0 name:TPP_enzyme_C; db:Pfam-A.hmm|PF02780.20 evalue:2e-25 score:88.3 best_domain_score:86.3 name:Transketolase_C; db:Pfam-A.hmm|PF00456.21 evalue:4.1e-06 score:25.2 best_domain_score:21.2 name:Transketolase_N; db:Pfam-A.hmm|PF02779.24 evalue:1.1e-30 score:105.8 best_domain_score:104.7 name:Transket_pyr;
sprot_desc 1-deoxy-D-xylulose-5-phosphate synthase;
sprot_id sp|Q47NL9|DXS_THEFY;
sprot_target db:uniprot_sprot|sp|Q47NL9|DXS_THEFY 2 627 evalue:2.6e-144 qcov:99.40 identity:46.50;
tigrfam_acc TIGR00204;
tigrfam_desc 1-deoxy-D-xylulose-5-phosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name dxs;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00204 evalue:1.3e-173 score:578.0 best_domain_score:577.8 name:TIGR00204;
12828 11347 CDS
ID metaerg.pl|03595
allko_ids K08860; K11715; K05358; K08852; K14028;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF01011; PF13360; PF13570;
pfam_desc PQQ enzyme repeat; PQQ-like domain; PQQ-like domain;
pfam_id PQQ; PQQ_2; PQQ_3;
pfam_target db:Pfam-A.hmm|PF01011.21 evalue:1.4e-16 score:58.8 best_domain_score:20.4 name:PQQ; db:Pfam-A.hmm|PF13360.6 evalue:2.3e-25 score:88.8 best_domain_score:60.2 name:PQQ_2; db:Pfam-A.hmm|PF13570.6 evalue:9.8e-06 score:25.1 best_domain_score:15.3 name:PQQ_3;
sp YES;
tm_num 1;
11347 11469 signal_peptide
ID metaerg.pl|03596
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
12828 11347 transmembrane_helix
ID metaerg.pl|03597
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology i11404-11472o;
14466 12970 CDS
ID metaerg.pl|03598
allec_ids 6.3.5.-;
allgo_ids GO:0016874; GO:0005524; GO:0050567; GO:0070681; GO:0032543;
allko_ids K02434;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669604.1 12 496 evalue:2.3e-205 qcov:97.40 identity:76.50;
kegg_pathway_id 00251; 00252;
kegg_pathway_name Glutamate metabolism; Alanine and aspartate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY490-4;
metacyc_pathway_name L-asparagine biosynthesis III (tRNA-dependent);;
metacyc_pathway_type ASPARAGINE-SYN; Aminoacyl-tRNAs-Charging;;
pfam_acc PF02934; PF02637;
pfam_desc GatB/GatE catalytic domain; GatB domain;
pfam_id GatB_N; GatB_Yqey;
pfam_target db:Pfam-A.hmm|PF02934.15 evalue:4.5e-108 score:360.0 best_domain_score:359.6 name:GatB_N; db:Pfam-A.hmm|PF02637.18 evalue:4.7e-46 score:155.6 best_domain_score:155.1 name:GatB_Yqey;
sprot_desc Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B;
sprot_id sp|Q9Z578|GATB_STRCO;
sprot_target db:uniprot_sprot|sp|Q9Z578|GATB_STRCO 8 494 evalue:6.3e-125 qcov:97.80 identity:50.00;
tigrfam_acc TIGR00133;
tigrfam_desc aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name gatB;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00133 evalue:1e-153 score:511.5 best_domain_score:511.2 name:TIGR00133;
16046 14463 CDS
ID metaerg.pl|03599
allec_ids 6.3.5.7; 6.3.5.-;
allgo_ids GO:0030956; GO:0004040; GO:0005524; GO:0050567; GO:0006412;
allko_ids K02433;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666283.1 3 524 evalue:4.0e-232 qcov:99.10 identity:80.20;
kegg_pathway_id 00251; 00252;
kegg_pathway_name Glutamate metabolism; Alanine and aspartate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY-5921; PWY490-4;
metacyc_pathway_name glutaminyl-tRNAgln biosynthesis via transamidation;; L-asparagine biosynthesis III (tRNA-dependent);;
metacyc_pathway_type Aminoacyl-tRNAs-Charging;; ASPARAGINE-SYN; Aminoacyl-tRNAs-Charging;;
pfam_acc PF01425;
pfam_desc Amidase;
pfam_id Amidase;
pfam_target db:Pfam-A.hmm|PF01425.21 evalue:1.2e-151 score:505.0 best_domain_score:504.5 name:Amidase;
sprot_desc Glutamyl-tRNA(Gln) amidotransferase subunit A;
sprot_id sp|A0LSR0|GATA_ACIC1;
sprot_target db:uniprot_sprot|sp|A0LSR0|GATA_ACIC1 3 516 evalue:1.1e-156 qcov:97.50 identity:60.80;
tigrfam_acc TIGR00132;
tigrfam_desc aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name gatA;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00132 evalue:1.1e-175 score:584.0 best_domain_score:583.7 name:TIGR00132;
16457 16161 CDS
ID metaerg.pl|03600
allec_ids 6.3.5.-;
allgo_ids GO:0006450; GO:0005524; GO:0050567; GO:0006412;
allko_ids K02435;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666282.1 1 98 evalue:6.7e-32 qcov:100.00 identity:76.50;
kegg_pathway_id 00251; 00252;
kegg_pathway_name Glutamate metabolism; Alanine and aspartate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY490-4;
metacyc_pathway_name L-asparagine biosynthesis III (tRNA-dependent);;
metacyc_pathway_type ASPARAGINE-SYN; Aminoacyl-tRNAs-Charging;;
pfam_acc PF02686;
pfam_desc Glu-tRNAGln amidotransferase C subunit;
pfam_id Glu-tRNAGln;
pfam_target db:Pfam-A.hmm|PF02686.15 evalue:1.6e-16 score:59.5 best_domain_score:59.1 name:Glu-tRNAGln;
sprot_desc Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C;
sprot_id sp|Q1AXT1|GATC_RUBXD;
sprot_target db:uniprot_sprot|sp|Q1AXT1|GATC_RUBXD 3 93 evalue:5.6e-17 qcov:92.90 identity:53.80;
tigrfam_acc TIGR00135;
tigrfam_desc aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name gatC;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00135 evalue:3e-22 score:77.9 best_domain_score:77.8 name:TIGR00135;
16729 17247 CDS
ID metaerg.pl|03601
allec_ids 3.5.1.124;
allgo_ids GO:0005737; GO:0008233;
allko_ids K05520;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__QHCA01;g__QHCA01;s__QHCA01 sp003244095;
genomedb_acc GCA_003244095.1;
genomedb_target db:genomedb|GCA_003244095.1|PZS33944.1 1 171 evalue:6.6e-67 qcov:99.40 identity:71.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF01965;
pfam_desc DJ-1/PfpI family;
pfam_id DJ-1_PfpI;
pfam_target db:Pfam-A.hmm|PF01965.24 evalue:8.2e-47 score:158.3 best_domain_score:158.1 name:DJ-1_PfpI;
sprot_desc Deglycase PfpI;
sprot_id sp|Q51732|DEGLY_PYRFU;
sprot_target db:uniprot_sprot|sp|Q51732|DEGLY_PYRFU 7 171 evalue:5.3e-39 qcov:95.90 identity:46.70;
tigrfam_acc TIGR01382;
tigrfam_desc intracellular protease, PfpI family;
tigrfam_mainrole Protein fate;
tigrfam_name PfpI;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01382 evalue:6e-48 score:161.7 best_domain_score:161.6 name:TIGR01382;
17470 18075 CDS
ID metaerg.pl|03602
allec_ids 3.5.2.19;
allgo_ids GO:0003824; GO:0016812; GO:0046677;
allko_ids K20816;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441460.1 5 199 evalue:5.2e-71 qcov:97.00 identity:69.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF00857;
pfam_desc Isochorismatase family;
pfam_id Isochorismatase;
pfam_target db:Pfam-A.hmm|PF00857.20 evalue:6.5e-34 score:116.9 best_domain_score:116.7 name:Isochorismatase;
sprot_desc Streptothricin hydrolase;
sprot_id sp|Q1MW86|STTH_STRA9;
sprot_target db:uniprot_sprot|sp|Q1MW86|STTH_STRA9 17 170 evalue:1.4e-06 qcov:76.60 identity:33.10;
18072 18806 CDS
ID metaerg.pl|03603
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669601.1 18 243 evalue:3.3e-88 qcov:92.60 identity:72.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:2e-05 score:23.9 best_domain_score:23.3 name:NUDIX;
20109 18859 CDS
ID metaerg.pl|03604
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF06094;
pfam_desc Gamma-glutamyl cyclotransferase, AIG2-like;
pfam_id GGACT;
pfam_target db:Pfam-A.hmm|PF06094.12 evalue:1.8e-13 score:50.4 best_domain_score:47.8 name:GGACT;
22202 20106 CDS
ID metaerg.pl|03605
allec_ids 6.5.1.2;
allgo_ids GO:0003911; GO:0003677; GO:0046872; GO:0006281; GO:0006260;
allko_ids K01972;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441459.1 4 696 evalue:8.9e-288 qcov:99.30 identity:72.80;
kegg_pathway_id 03410; 03030; 03420; 03430;
kegg_pathway_name Base excision repair; DNA replication; Nucleotide excision repair; Mismatch repair;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF00533; PF01653; PF03120; PF03119; PF00633; PF12826; PF14520;
pfam_desc BRCA1 C Terminus (BRCT) domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase C4 zinc finger domain; Helix-hairpin-helix motif; Helix-hairpin-helix motif; Helix-hairpin-helix domain;
pfam_id BRCT; DNA_ligase_aden; DNA_ligase_OB; DNA_ligase_ZBD; HHH; HHH_2; HHH_5;
pfam_target db:Pfam-A.hmm|PF00533.26 evalue:2e-08 score:33.7 best_domain_score:33.1 name:BRCT; db:Pfam-A.hmm|PF01653.18 evalue:3.1e-112 score:374.0 best_domain_score:372.9 name:DNA_ligase_aden; db:Pfam-A.hmm|PF03120.16 evalue:2.7e-31 score:106.5 best_domain_score:105.6 name:DNA_ligase_OB; db:Pfam-A.hmm|PF03119.16 evalue:4.6e-06 score:25.8 best_domain_score:24.5 name:DNA_ligase_ZBD; db:Pfam-A.hmm|PF00633.23 evalue:8e-07 score:27.9 best_domain_score:21.7 name:HHH; db:Pfam-A.hmm|PF12826.7 evalue:1e-17 score:63.2 best_domain_score:61.2 name:HHH_2; db:Pfam-A.hmm|PF14520.6 evalue:6.1e-12 score:45.2 best_domain_score:23.1 name:HHH_5;
sprot_desc DNA ligase;
sprot_id sp|A8L538|DNLJ_FRASN;
sprot_target db:uniprot_sprot|sp|A8L538|DNLJ_FRASN 19 693 evalue:1.7e-176 qcov:96.70 identity:50.10;
tigrfam_acc TIGR00575;
tigrfam_desc DNA ligase, NAD-dependent;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnlj;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00575 evalue:2.5e-224 score:745.6 best_domain_score:745.4 name:TIGR00575;
22878 22327 CDS
ID metaerg.pl|03606
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora chokoriensis;
genomedb_acc GCF_900091505.1;
genomedb_target db:genomedb|GCF_900091505.1|WP_088989477.1 1 183 evalue:3.2e-43 qcov:100.00 identity:51.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
tm_num 4;
22878 22327 transmembrane_helix
ID metaerg.pl|03607
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology i22411-22464o22603-22671i22675-22728o22756-22824i;
24200 23058 CDS
ID metaerg.pl|03608
allec_ids 2.8.1.13; 2.1.1.61;
allgo_ids GO:0005737; GO:0005524; GO:0016783; GO:0000049; GO:0006400;
allko_ids K00566;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669598.1 8 378 evalue:1.5e-148 qcov:97.60 identity:71.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF03054;
pfam_desc tRNA methyl transferase;
pfam_id tRNA_Me_trans;
pfam_target db:Pfam-A.hmm|PF03054.16 evalue:2.3e-102 score:341.6 best_domain_score:341.4 name:tRNA_Me_trans;
sprot_desc tRNA-specific 2-thiouridylase MnmA;
sprot_id sp|A8L536|MNMA_FRASN;
sprot_target db:uniprot_sprot|sp|A8L536|MNMA_FRASN 3 367 evalue:5.0e-98 qcov:96.10 identity:53.80;
tigrfam_acc TIGR00420;
tigrfam_desc tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name trmU;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00420 evalue:1.4e-81 score:273.2 best_domain_score:273.0 name:TIGR00420;
25495 24200 CDS
ID metaerg.pl|03609
allec_ids 2.8.1.7;
allgo_ids GO:0031071; GO:0051536; GO:0046872; GO:0008483;
allko_ids K04487;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441456.1 8 430 evalue:4.9e-143 qcov:98.10 identity:68.80;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY0-1061; PWY0-1021;
metacyc_pathway_name superpathway of L-alanine biosynthesis;; L-alanine biosynthesis III;;
metacyc_pathway_type ALANINE-SYN; Super-Pathways;; ALANINE-SYN;;
pfam_acc PF00266;
pfam_desc Aminotransferase class-V;
pfam_id Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:1.3e-56 score:191.4 best_domain_score:190.6 name:Aminotran_5;
sprot_desc Iscs-like cysteine desulfurase;
sprot_id sp|P9WQ70|ISCSL_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WQ70|ISCSL_MYCTO 44 408 evalue:4.4e-58 qcov:84.70 identity:41.00;
25528 25932 CDS
ID metaerg.pl|03610
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
25929 26426 CDS
ID metaerg.pl|03611
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__Palsa-742;s__Palsa-742 sp003133325;
genomedb_acc GCA_003133325.1;
genomedb_target db:genomedb|GCA_003133325.1|PKXA01000106.1_17 16 158 evalue:2.4e-34 qcov:86.70 identity:49.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF10604;
pfam_desc Polyketide cyclase / dehydrase and lipid transport;
pfam_id Polyketide_cyc2;
pfam_target db:Pfam-A.hmm|PF10604.9 evalue:4.1e-07 score:29.6 best_domain_score:29.1 name:Polyketide_cyc2;
26508 26978 CDS
ID metaerg.pl|03612
allgo_ids GO:0002161;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441455.1 5 151 evalue:3.8e-45 qcov:94.20 identity:67.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF04073;
pfam_desc Aminoacyl-tRNA editing domain;
pfam_id tRNA_edit;
pfam_target db:Pfam-A.hmm|PF04073.15 evalue:1.3e-29 score:102.0 best_domain_score:101.7 name:tRNA_edit;
27215 27409 CDS
ID metaerg.pl|03613
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF05532;
pfam_desc CsbD-like;
pfam_id CsbD;
pfam_target db:Pfam-A.hmm|PF05532.12 evalue:3.2e-14 score:51.8 best_domain_score:51.5 name:CsbD;
28492 27506 CDS
ID metaerg.pl|03614
allgo_ids GO:0009055; GO:0050660;
allko_ids K03522;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666266.1 1 327 evalue:2.4e-134 qcov:99.70 identity:77.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF01012; PF00766;
pfam_desc Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain;
pfam_id ETF; ETF_alpha;
pfam_target db:Pfam-A.hmm|PF01012.21 evalue:1.4e-31 score:109.0 best_domain_score:108.5 name:ETF; db:Pfam-A.hmm|PF00766.19 evalue:2.2e-32 score:110.1 best_domain_score:110.1 name:ETF_alpha;
sprot_desc Electron transfer flavoprotein subunit alpha;
sprot_id sp|O33096|ETFA_MYCLE;
sprot_target db:uniprot_sprot|sp|O33096|ETFA_MYCLE 1 328 evalue:1.6e-63 qcov:100.00 identity:44.50;
29347 28562 CDS
ID metaerg.pl|03615
allgo_ids GO:0009055;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666265.1 1 261 evalue:2.8e-117 qcov:100.00 identity:82.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF01012;
pfam_desc Electron transfer flavoprotein domain;
pfam_id ETF;
pfam_target db:Pfam-A.hmm|PF01012.21 evalue:4.8e-47 score:159.4 best_domain_score:159.1 name:ETF;
sprot_desc Electron transfer flavoprotein subunit beta;
sprot_id sp|P64098|ETFB_MYCBO;
sprot_target db:uniprot_sprot|sp|P64098|ETFB_MYCBO 3 261 evalue:8.9e-54 qcov:99.20 identity:44.20;
29513 30319 CDS
ID metaerg.pl|03616
allec_ids 2.1.1.-;
allgo_ids GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441453.1 3 266 evalue:5.6e-73 qcov:98.50 identity:61.00;
kegg_pathway_id 00626; 00450; 00350; 00380; 00150; 00340;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tyrosine metabolism; Tryptophan metabolism; Androgen and estrogen metabolism; Histidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY-6113; PWY-5729; PWY-5305; PWYG-321; PWY-1422; PWY-5876; PWY-1061; PWY-5864; PWY-5975; PWY-4021; PWY-5041; PWY-6153; PWY-3542; ALL-CHORISMATE-PWY; PWY-5467; PWY-6477; PWY-6575; PWY-6442; CODH-PWY; PWY-6146; PWY-6395; PWY-6427; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6292; PWY-5479; PWY-5987; CO2FORM-PWY; PWY-5116; PWY-1581; PWY-5773; PWY-6519; METHIONINE-DEG1-PWY; PWY-5328; METH-ACETATE-PWY; PWY-6142; PWY-6154; UBISYN-PWY; PWY-6424; PWY-5856; PWY-5855; PWY-5209; PWY-6151; PWY-6303; PWY-5857;
metacyc_pathway_name superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; vitamin E biosynthesis (tocopherols);; magnoflorine biosynthesis;; homogalacturonan biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; autoinducer AI-2 biosynthesis I;; choline biosynthesis II;; superpathway of chorismate metabolism;; gramine biosynthesis;; gibberellin inactivation II (methylation);; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of seleno-compound metabolism;; rot-2'-enonate biosynthesis;; xanthohumol biosynthesis;; biotin biosynthesis I;; superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; methanogenesis from acetate;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ; ubiquinol-9 biosynthesis (prokaryotic);; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Autoinducer-Biosynthesis;; Choline-Biosynthesis;; Super-Pathways;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Autotrophic-CO2-Fixation;; Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Rotenoids-Biosynthesis;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; METHANOGENESIS;; Gluconeogenesis; Super-Pathways;; Autoinducer-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; ; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;;
pfam_acc PF08241; PF08242; PF13489; PF13649; PF13847; PF03291;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; mRNA capping enzyme;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; Pox_MCEL;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:9.3e-19 score:67.1 best_domain_score:65.9 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.1e-08 score:34.9 best_domain_score:34.2 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:3.2e-12 score:45.8 best_domain_score:45.2 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.6e-16 score:60.0 best_domain_score:59.2 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:5.4e-10 score:38.5 best_domain_score:38.3 name:Methyltransf_31; db:Pfam-A.hmm|PF03291.16 evalue:6.6e-05 score:21.4 best_domain_score:19.8 name:Pox_MCEL;
sprot_desc Probable S-adenosylmethionine-dependent methyltransferase MSMEG_2350/MSMEI_2290;
sprot_id sp|A0QUV5|Y2350_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QUV5|Y2350_MYCS2 10 266 evalue:1.4e-49 qcov:95.90 identity:46.00;
30316 32067 CDS
ID metaerg.pl|03617
allec_ids 2.4.1.18;
allgo_ids GO:0003824; GO:0005975; GO:0003844; GO:0102752; GO:0030979; GO:0005978;
allko_ids K16149;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441452.1 1 571 evalue:6.9e-233 qcov:97.90 identity:70.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY-622; PWY-5067; GLYCOGENSYNTH-PWY;
metacyc_pathway_name starch biosynthesis;; glycogen biosynthesis II (from UDP-D-Glucose);; glycogen biosynthesis I (from ADP-D-Glucose);;
metacyc_pathway_type GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;;
pfam_acc PF09210; PF03065;
pfam_desc Domain of unknown function (DUF1957); Glycosyl hydrolase family 57;
pfam_id DUF1957; Glyco_hydro_57;
pfam_target db:Pfam-A.hmm|PF09210.11 evalue:4.5e-13 score:48.7 best_domain_score:47.8 name:DUF1957; db:Pfam-A.hmm|PF03065.15 evalue:4.3e-18 score:64.8 best_domain_score:56.5 name:Glyco_hydro_57;
sprot_desc 1,4-alpha-glucan branching enzyme TTHA1902;
sprot_id sp|Q5SH28|BE_THET8;
sprot_target db:uniprot_sprot|sp|Q5SH28|BE_THET8 20 549 evalue:2.8e-71 qcov:90.90 identity:33.20;
32450 32157 CDS
ID metaerg.pl|03618
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
tm_num 3;
32450 32157 transmembrane_helix
ID metaerg.pl|03619
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology o32166-32225i32262-32321o32334-32402i;
32556 34130 CDS
ID metaerg.pl|03620
allgo_ids GO:0006813; GO:0008324; GO:0016021; GO:0005886;
allko_ids K07085;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441449.1 4 524 evalue:1.2e-183 qcov:99.40 identity:67.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF06826; PF02080;
pfam_desc Predicted Permease Membrane Region; TrkA-C domain;
pfam_id Asp-Al_Ex; TrkA_C;
pfam_target db:Pfam-A.hmm|PF06826.12 evalue:1.8e-59 score:199.5 best_domain_score:107.1 name:Asp-Al_Ex; db:Pfam-A.hmm|PF02080.21 evalue:5.5e-17 score:60.6 best_domain_score:42.4 name:TrkA_C;
sprot_desc Uncharacterized transporter GSU1016;
sprot_id sp|Q74EE6|Y1016_GEOSL;
sprot_target db:uniprot_sprot|sp|Q74EE6|Y1016_GEOSL 4 524 evalue:1.4e-79 qcov:99.40 identity:37.00;
tigrfam_acc TIGR01625;
tigrfam_desc AspT/YidE/YbjL antiporter duplication domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name YidE_YbjL_dupl;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01625 evalue:2.1e-51 score:172.9 best_domain_score:106.1 name:TIGR01625;
tm_num 10;
32556 34130 transmembrane_helix
ID metaerg.pl|03621
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology o32565-32633i32637-32705o32748-32807i32826-32894o32991-33059i33588-33656o33669-33737i33795-33863o33873-33941i34050-34118o;
34277 35539 CDS
ID metaerg.pl|03622
allec_ids 2.4.1.11;
allgo_ids GO:0004373; GO:0005978;
allko_ids K03867; K13003; K00712; K12989; K14335; K08256; K13677; K13001; K00749; K03844; K13657; K02844; K00688; K03857; K12996; K13668; K03429; K00703; K02840; K16150;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442248.1 5 420 evalue:4.1e-171 qcov:99.00 identity:72.60;
kegg_pathway_id 01031; 00561; 00540; 00500; 01030; 00510;
kegg_pathway_name Glycan structures - biosynthesis 2; Glycerolipid metabolism; Lipopolysaccharide biosynthesis; Starch and sucrose metabolism; Glycan structures - biosynthesis 1; N-Glycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY-5067;
metacyc_pathway_name glycogen biosynthesis II (from UDP-D-Glucose);;
metacyc_pathway_type GLYCOGEN-BIOSYN;;
pfam_acc PF00534; PF13439; PF08323; PF13524; PF13692; PF13477; PF13579;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Starch synthase catalytic domain; Glycosyl transferases group 1; Glycosyl transferases group 1; Glycosyl transferase 4-like; Glycosyl transferase 4-like domain;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_transf_5; Glyco_trans_1_2; Glyco_trans_1_4; Glyco_trans_4_2; Glyco_trans_4_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:2.1e-43 score:147.0 best_domain_score:146.1 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:4.1e-35 score:120.5 best_domain_score:120.5 name:Glyco_transf_4; db:Pfam-A.hmm|PF08323.11 evalue:1.6e-21 score:76.3 best_domain_score:66.8 name:Glyco_transf_5; db:Pfam-A.hmm|PF13524.6 evalue:1.7e-14 score:53.2 best_domain_score:51.8 name:Glyco_trans_1_2; db:Pfam-A.hmm|PF13692.6 evalue:1.7e-33 score:115.2 best_domain_score:114.1 name:Glyco_trans_1_4; db:Pfam-A.hmm|PF13477.6 evalue:5.4e-08 score:32.2 best_domain_score:31.5 name:Glyco_trans_4_2; db:Pfam-A.hmm|PF13579.6 evalue:1.4e-28 score:99.5 best_domain_score:99.5 name:Glyco_trans_4_4;
sprot_desc Glycogen synthase;
sprot_id sp|P9WMY8|GLGSY_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WMY8|GLGSY_MYCTO 1 388 evalue:6.0e-68 qcov:92.40 identity:39.40;
35772 36254 CDS
ID metaerg.pl|03623
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666255.1 1 149 evalue:3.5e-30 qcov:93.10 identity:51.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF04314;
pfam_desc Copper chaperone PCu(A)C;
pfam_id PCuAC;
pfam_target db:Pfam-A.hmm|PF04314.13 evalue:1.9e-24 score:84.8 best_domain_score:84.2 name:PCuAC;
sp YES;
35772 35828 lipoprotein_signal_peptide
ID metaerg.pl|03624
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
36247 36927 CDS
ID metaerg.pl|03625
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666254.1 19 226 evalue:3.8e-70 qcov:92.00 identity:61.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF02630;
pfam_desc SCO1/SenC;
pfam_id SCO1-SenC;
pfam_target db:Pfam-A.hmm|PF02630.14 evalue:1e-25 score:89.4 best_domain_score:89.1 name:SCO1-SenC;
sp YES;
tm_num 1;
36247 36342 lipoprotein_signal_peptide
ID metaerg.pl|03626
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
36247 36927 transmembrane_helix
ID metaerg.pl|03627
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology i36307-36375o;
36980 37906 CDS
ID metaerg.pl|03628
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666253.1 4 294 evalue:3.7e-121 qcov:94.50 identity:72.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF09678;
pfam_desc Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG);
pfam_id Caa3_CtaG;
pfam_target db:Pfam-A.hmm|PF09678.10 evalue:2.1e-35 score:121.5 best_domain_score:121.5 name:Caa3_CtaG;
tm_num 7;
36980 37906 transmembrane_helix
ID metaerg.pl|03629
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology o37037-37105i37142-37201o37229-37291i37352-37420o37448-37501i37559-37627o37697-37765i;
38016 38249 CDS
ID metaerg.pl|03630
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664093.1 1 70 evalue:2.5e-13 qcov:90.90 identity:58.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF11213;
pfam_desc Protein of unknown function (DUF3006);
pfam_id DUF3006;
pfam_target db:Pfam-A.hmm|PF11213.8 evalue:1e-08 score:34.5 best_domain_score:34.3 name:DUF3006;
39165 38257 CDS
ID metaerg.pl|03631
allec_ids 2.3.1.-;
allgo_ids GO:0005618; GO:0005886; GO:0016746;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666251.1 24 300 evalue:2.9e-118 qcov:91.70 identity:73.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id CENTBENZCOA-PWY; PWY-6316; PWY-6404; PWY-5313; PWY-5140; PWY-5987; PWY-6411; PWY-5268; PWY0-881; PWY-6438; THREOCAT-PWY; PWY-84; ECASYN-PWY; PWY-6515; P3-PWY; PWY-6295; PWY-5284; PWY-5307; PWY-6318; PWY-5405; PWY-5972; KDO-LIPASYN-PWY; PWY-6412; PWY-5393; PWY-5965; PWY-5209; PWY-5400; PWY-6113; PWY-6413; FASYN-INITIAL-PWY; PWYG-321; PWY-6432; PWY1A0-6325; LPSSYN-PWY; PWY-5477; PWY-5437; PWY-5981; PWY-5080; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5139; PWY-6310; KDO-NAGLIPASYN-PWY; PWY-4801; PWY-5184; BENZCOA-PWY; PWY-6312; PWY-6442; PWY-6418; PWY1-3; PWY-6397;
metacyc_pathway_name benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; cannabinoid biosynthesis;; sorgoleone biosynthesis;; ginsenoside degradation I;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; resveratrol biosynthesis;; enterobacterial common antigen biosynthesis;; phloridzin biosynthesis;; gallate degradation III (anaerobic);; ; shisonin biosynthesis;; gentiodelphin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; (Kdo)2-lipid A biosynthesis I;; ginsenoside degradation II;; raspberry ketone biosynthesis;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; amaranthin biosynthesis;; superpathway of mycolate biosynthesis;; ginsenoside degradation III;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; curcuminoid biosynthesis;; actinorhodin biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; gallotannin biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; very long chain fatty acid biosynthesis I;; sophorolipid biosynthesis;; pelargonidin conjugates biosynthesis;; aloesone biosynthesis II;; superpathway of (Kdo)2-lipid A biosynthesis;; aloesone biosynthesis I;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; polyhydroxybutanoate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN; Super-Pathways;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Ginsenoside-Degradation;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; FLAVONOID-SYN;; GALLATE-DEG;; ; ANTHOCYANIN-SYN;; ANTHOCYANIN-SYN;; PHENYLALANINE-DEG;; BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; Lipid-Biosynthesis;; Ginsenoside-Degradation;; POLYKETIDE-SYN;; Fatty-acid-biosynthesis;; METHANOGENESIS;; BETALAIN-ALKALOIDS;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOID-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;; GALLOTANNINS;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; Fatty-acid-biosynthesis;; Lipid-Biosynthesis;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; Storage-Compounds-Biosynthesis;; Cell-Wall-Biosynthesis;;
pfam_acc PF00132;
pfam_desc Bacterial transferase hexapeptide (six repeats);
pfam_id Hexapep;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:6.1e-08 score:31.4 best_domain_score:21.9 name:Hexapep;
sprot_desc Putative acetyltransferase Rv3034c;
sprot_id sp|O53281|Y3034_MYCTU;
sprot_target db:uniprot_sprot|sp|O53281|Y3034_MYCTU 63 288 evalue:8.2e-51 qcov:74.80 identity:45.30;
40190 39162 CDS
ID metaerg.pl|03632
allgo_ids GO:0008168;
allko_ids K00568; K00599;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442152.1 38 339 evalue:3.3e-118 qcov:88.30 identity:69.90;
kegg_pathway_id 00350; 00130; 00340; 00380; 00150; 00450; 00626;
kegg_pathway_name Tyrosine metabolism; Ubiquinone biosynthesis; Histidine metabolism; Tryptophan metabolism; Androgen and estrogen metabolism; Selenoamino acid metabolism; Naphthalene and anthracene degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF08241; PF08242; PF13489; PF13649; PF13847; PF01209;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; ubiE/COQ5 methyltransferase family;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:3.7e-23 score:81.2 best_domain_score:80.3 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:4e-13 score:49.2 best_domain_score:48.4 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:2.5e-12 score:46.2 best_domain_score:45.4 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.1e-21 score:76.6 best_domain_score:75.2 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.2e-17 score:63.3 best_domain_score:62.6 name:Methyltransf_31; db:Pfam-A.hmm|PF01209.18 evalue:1.6e-11 score:43.2 best_domain_score:42.7 name:Ubie_methyltran;
40981 40199 CDS
ID metaerg.pl|03633
allec_ids 4.2.1.17;
allgo_ids GO:0003824; GO:0004300; GO:0006631;
allko_ids K13767; K15016; K13816; K01715; K01782; K07516; K01692; K00022; K07511; K01825; K10527; K07515; K07514;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666249.1 1 259 evalue:2.9e-114 qcov:99.60 identity:80.30;
kegg_pathway_id 00062; 00903; 01040; 00592; 00410; 00071; 00650; 00640; 00281; 00280; 00310; 00380; 00632; 00930;
kegg_pathway_name Fatty acid elongation in mitochondria; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Butanoate metabolism; Propanoate metabolism; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; Tryptophan metabolism; Benzoate degradation via CoA ligation; Caprolactam degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id ILEUDEG-PWY; FAO-PWY; PWY-5136; PWY-561; PWY-6435; PWY-5138; P3-PWY; VALDEG-PWY;
metacyc_pathway_name L-isoleucine degradation I;; fatty acid β-oxidation I;; fatty acid β-oxidation II (peroxisome);; superpathway of glyoxylate cycle and fatty acid degradation;; 4-hydroxybenzoate biosynthesis III (plants);; unsaturated, even numbered fatty acid β-oxidation;; gallate degradation III (anaerobic);; L-valine degradation I;;
metacyc_pathway_type ISOLEUCINE-DEG;; Fatty-Acid-Degradation;; Fatty-Acid-Degradation;; Energy-Metabolism; Super-Pathways;; 4-Hydroxybenzoate-Biosynthesis;; Fatty-Acid-Degradation;; GALLATE-DEG;; VALINE-DEG;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:2.2e-62 score:209.9 best_domain_score:209.6 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:3.5e-26 score:91.7 best_domain_score:80.2 name:ECH_2;
sprot_desc Probable enoyl-CoA hydratase echA8;
sprot_id sp|P64017|ECHA8_MYCBO;
sprot_target db:uniprot_sprot|sp|P64017|ECHA8_MYCBO 9 249 evalue:1.5e-48 qcov:92.70 identity:46.10;
41127 42656 CDS
ID metaerg.pl|03634
allgo_ids GO:0005887; GO:0015129; GO:0015727; GO:0005886; GO:0015295;
allko_ids K03303;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Dermatophilaceae;g__Pedococcus;s__Pedococcus sp001428025;
genomedb_acc GCF_001428025.1;
genomedb_target db:genomedb|GCF_001428025.1|WP_056883124.1 6 498 evalue:1.2e-60 qcov:96.90 identity:36.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF02652;
pfam_desc L-lactate permease;
pfam_id Lactate_perm;
pfam_target db:Pfam-A.hmm|PF02652.14 evalue:4.7e-43 score:146.9 best_domain_score:81.8 name:Lactate_perm;
sprot_desc L-lactate permease;
sprot_id sp|P55910|LCTP_BACSU;
sprot_target db:uniprot_sprot|sp|P55910|LCTP_BACSU 9 499 evalue:1.8e-18 qcov:96.50 identity:26.90;
tm_num 13;
41127 42656 transmembrane_helix
ID metaerg.pl|03635
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology i41139-41192o41220-41273i41292-41360o41445-41513i41550-41609o41667-41735i41769-41822o41832-41885i41922-41990o42090-42158i42234-42302o42312-42380i42582-42650o;
43191 42661 CDS
ID metaerg.pl|03636
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA5794;g__UBA6912;s__UBA6912 sp002450985;
genomedb_acc GCA_002450985.1;
genomedb_target db:genomedb|GCA_002450985.1|DKBA01000123.1_7 1 161 evalue:1.7e-33 qcov:91.50 identity:50.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF12724;
pfam_desc Flavodoxin domain;
pfam_id Flavodoxin_5;
pfam_target db:Pfam-A.hmm|PF12724.7 evalue:7.2e-24 score:83.9 best_domain_score:83.5 name:Flavodoxin_5;
44634 43453 CDS
ID metaerg.pl|03637
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664632.1 13 393 evalue:9.0e-120 qcov:96.90 identity:63.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF05762;
pfam_desc VWA domain containing CoxE-like protein;
pfam_id VWA_CoxE;
pfam_target db:Pfam-A.hmm|PF05762.14 evalue:6.4e-63 score:211.3 best_domain_score:210.6 name:VWA_CoxE;
45524 44637 CDS
ID metaerg.pl|03638
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664634.1 11 295 evalue:2.8e-110 qcov:96.60 identity:73.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF00004; PF13401; PF07726; PF07728; PF05496;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain; ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); Holliday junction DNA helicase RuvB P-loop domain;
pfam_id AAA; AAA_22; AAA_3; AAA_5; RuvB_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1.6e-08 score:34.2 best_domain_score:32.5 name:AAA; db:Pfam-A.hmm|PF13401.6 evalue:2.4e-06 score:27.1 best_domain_score:25.5 name:AAA_22; db:Pfam-A.hmm|PF07726.11 evalue:9.9e-07 score:27.9 best_domain_score:12.9 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:3.9e-14 score:52.0 best_domain_score:49.2 name:AAA_5; db:Pfam-A.hmm|PF05496.12 evalue:8.2e-05 score:21.6 best_domain_score:10.1 name:RuvB_N;
45636 46190 CDS
ID metaerg.pl|03639
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442151.1 4 174 evalue:5.4e-51 qcov:92.90 identity:63.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF13478;
pfam_desc XdhC Rossmann domain;
pfam_id XdhC_C;
pfam_target db:Pfam-A.hmm|PF13478.6 evalue:4.2e-24 score:84.7 best_domain_score:84.4 name:XdhC_C;
46966 46244 CDS
ID metaerg.pl|03640
allec_ids 2.4.2.1;
allgo_ids GO:0003824; GO:0009116; GO:0004731; GO:0042278;
allko_ids K01243; K03784;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669340.1 1 238 evalue:3.3e-96 qcov:99.20 identity:77.50;
kegg_pathway_id 00271; 00760; 00230; 00240;
kegg_pathway_name Methionine metabolism; Nicotinate and nicotinamide metabolism; Purine metabolism; Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id SALVPURINE2-PWY; URSIN-PWY; SALVADEHYPOX-PWY; P121-PWY; PWY0-1296; P1-PWY; PWY-5695; PWY-6579; PWY-6353;
metacyc_pathway_name xanthine and xanthosine salvage;; ureide biosynthesis;; adenosine nucleotides degradation II;; adenine and adenosine salvage I;; purine ribonucleosides degradation;; ; inosine 5'-phosphate degradation;; superpathway of guanine and guanosine salvage;; purine nucleotides degradation II (aerobic);;
metacyc_pathway_type Purine-Nucleotides-Salvage;; Polyamine-Biosynthesis; Super-Pathways;; Adenosine-Nucleotides-Degradation;; Adenine-Adenosine-Salvage;; Purine-Degradation;; ; Purine-Degradation;; Guanine-Guanosine-Salvage; Super-Pathways;; Purine-Degradation; Super-Pathways;;
pfam_acc PF01048;
pfam_desc Phosphorylase superfamily;
pfam_id PNP_UDP_1;
pfam_target db:Pfam-A.hmm|PF01048.20 evalue:7.4e-39 score:132.6 best_domain_score:132.4 name:PNP_UDP_1;
sprot_desc Purine nucleoside phosphorylase DeoD-type;
sprot_id sp|Q6D989|DEOD_PECAS;
sprot_target db:uniprot_sprot|sp|Q6D989|DEOD_PECAS 1 234 evalue:1.9e-79 qcov:97.50 identity:62.40;
tigrfam_acc TIGR00107;
tigrfam_desc purine nucleoside phosphorylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name deoD;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00107 evalue:3.4e-94 score:313.8 best_domain_score:313.5 name:TIGR00107;
47201 47644 CDS
ID metaerg.pl|03641
allko_ids K01759;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pleomorphomonadaceae;g__Methylobrevis;s__Methylobrevis pamukkalensis;
genomedb_acc GCF_001720135.1;
genomedb_target db:genomedb|GCF_001720135.1|WP_069307982.1 2 142 evalue:1.3e-34 qcov:95.90 identity:57.00;
kegg_pathway_id 00620; 04011;
kegg_pathway_name Pyruvate metabolism; MAPK signaling pathway - yeast;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF00903; PF18029;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase-like domain;
pfam_id Glyoxalase; Glyoxalase_6;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:6.7e-11 score:41.7 best_domain_score:41.5 name:Glyoxalase; db:Pfam-A.hmm|PF18029.1 evalue:2.1e-08 score:34.1 best_domain_score:33.7 name:Glyoxalase_6;
49165 48008 CDS
ID metaerg.pl|03642
allec_ids 2.8.3.13;
allgo_ids GO:0003824; GO:0005739; GO:0047369;
allko_ids K14472; K18703;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664635.1 7 382 evalue:2.1e-169 qcov:97.70 identity:76.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF02515;
pfam_desc CoA-transferase family III;
pfam_id CoA_transf_3;
pfam_target db:Pfam-A.hmm|PF02515.17 evalue:5.4e-126 score:419.9 best_domain_score:419.7 name:CoA_transf_3;
sprot_desc Succinate--hydroxymethylglutarate CoA-transferase;
sprot_id sp|Q7TNE1|SUCHY_MOUSE;
sprot_target db:uniprot_sprot|sp|Q7TNE1|SUCHY_MOUSE 8 382 evalue:6.2e-80 qcov:97.40 identity:39.30;
49875 49273 CDS
ID metaerg.pl|03643
allec_ids 2.1.1.77;
allgo_ids GO:0005737; GO:0004719; GO:0030091;
allko_ids K00573;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667025.1 1 199 evalue:1.0e-55 qcov:99.50 identity:61.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF01135;
pfam_desc Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
pfam_id PCMT;
pfam_target db:Pfam-A.hmm|PF01135.19 evalue:1.9e-52 score:177.3 best_domain_score:177.2 name:PCMT;
sprot_desc Protein-L-isoaspartate O-methyltransferase;
sprot_id sp|A7NI01|PIMT_ROSCS;
sprot_target db:uniprot_sprot|sp|A7NI01|PIMT_ROSCS 6 196 evalue:6.4e-44 qcov:95.50 identity:49.70;
tigrfam_acc TIGR00080;
tigrfam_desc protein-L-isoaspartate O-methyltransferase;
tigrfam_mainrole Protein fate;
tigrfam_name pimt;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00080 evalue:2.5e-53 score:180.3 best_domain_score:180.1 name:TIGR00080;
51148 49994 CDS
ID metaerg.pl|03644
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Saccharomonospora;s__Saccharomonospora saliphila;
genomedb_acc GCF_000383795.1;
genomedb_target db:genomedb|GCF_000383795.1|WP_019815629.1 1 383 evalue:1.0e-59 qcov:99.70 identity:37.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF03773;
pfam_desc Predicted permease;
pfam_id ArsP_1;
pfam_target db:Pfam-A.hmm|PF03773.13 evalue:3.5e-41 score:140.5 best_domain_score:139.7 name:ArsP_1;
tm_num 8;
51148 49994 transmembrane_helix
ID metaerg.pl|03645
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology i50030-50098o50162-50230i50255-50323o50336-50404i50777-50845o50873-50929i50948-51016o51074-51142i;
51275 51604 CDS
ID metaerg.pl|03646
allgo_ids GO:0003700; GO:0006355; GO:0003677; GO:0046872;
allko_ids K21903;
casgene_acc COG0640_csa3_CAS-I-A;
casgene_name csa3;
casgene_target db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:9.3e-16 score:57.5 best_domain_score:57.3 name:csa3;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__IMCC26256;f__PALSA-555;g__PALSA-555;s__PALSA-555 sp003140175;
genomedb_acc GCA_003140175.1;
genomedb_target db:genomedb|GCA_003140175.1|PLJD01000044.1_41 9 108 evalue:7.2e-27 qcov:91.70 identity:64.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF12840; PF01022;
pfam_desc Helix-turn-helix domain; Bacterial regulatory protein, arsR family;
pfam_id HTH_20; HTH_5;
pfam_target db:Pfam-A.hmm|PF12840.7 evalue:1.7e-12 score:46.4 best_domain_score:46.4 name:HTH_20; db:Pfam-A.hmm|PF01022.20 evalue:3.8e-14 score:51.5 best_domain_score:49.5 name:HTH_5;
sprot_desc Transcriptional repressor SmtB;
sprot_id sp|P30340|SMTB_SYNE7;
sprot_target db:uniprot_sprot|sp|P30340|SMTB_SYNE7 17 103 evalue:6.4e-06 qcov:79.80 identity:35.60;
53576 51639 CDS
ID metaerg.pl|03647
allgo_ids GO:0003824; GO:0005829; GO:0017168; GO:0006749;
allko_ids K01474;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664641.1 10 645 evalue:7.7e-310 qcov:98.60 identity:82.80;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF02538;
pfam_desc Hydantoinase B/oxoprolinase;
pfam_id Hydantoinase_B;
pfam_target db:Pfam-A.hmm|PF02538.14 evalue:3.3e-132 score:440.7 best_domain_score:440.5 name:Hydantoinase_B;
sprot_desc hypothetical protein;
sprot_id sp|Q58373|Y963_METJA;
sprot_target db:uniprot_sprot|sp|Q58373|Y963_METJA 12 610 evalue:8.6e-50 qcov:92.90 identity:27.30;
55857 53659 CDS
ID metaerg.pl|03648
allec_ids 3.5.2.-;
allgo_ids GO:0016787; GO:0016810; GO:0008652;
allko_ids K01473;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664643.1 1 730 evalue:0.0e+00 qcov:99.70 identity:75.80;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id P164-PWY; PWY-5497; P621-PWY;
metacyc_pathway_name purine nucleobases degradation I (anaerobic);; purine nucleobases degradation II (anaerobic);; nylon-6 oligomer degradation;;
metacyc_pathway_type Fermentation; Purine-Degradation;; Fermentation; Purine-Degradation;; Other-Degradation;;
pfam_acc PF01968; PF05378;
pfam_desc Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region;
pfam_id Hydantoinase_A; Hydant_A_N;
pfam_target db:Pfam-A.hmm|PF01968.18 evalue:5.1e-86 score:287.8 best_domain_score:287.4 name:Hydantoinase_A; db:Pfam-A.hmm|PF05378.13 evalue:6.8e-47 score:158.7 best_domain_score:155.2 name:Hydant_A_N;
sprot_desc Putative D-/L-hydantoinase subunit A;
sprot_id sp|Q01262|HYUA_PSESN;
sprot_target db:uniprot_sprot|sp|Q01262|HYUA_PSESN 7 726 evalue:1.8e-115 qcov:98.40 identity:35.10;
57388 56063 CDS
ID metaerg.pl|03649
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664645.1 1 433 evalue:1.8e-113 qcov:98.20 identity:56.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF01425;
pfam_desc Amidase;
pfam_id Amidase;
pfam_target db:Pfam-A.hmm|PF01425.21 evalue:5.5e-75 score:252.3 best_domain_score:250.6 name:Amidase;
58052 57393 CDS
ID metaerg.pl|03650
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664647.1 1 218 evalue:1.7e-59 qcov:99.50 identity:60.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF06240; PF10604;
pfam_desc Carbon monoxide dehydrogenase subunit G (CoxG); Polyketide cyclase / dehydrase and lipid transport;
pfam_id COXG; Polyketide_cyc2;
pfam_target db:Pfam-A.hmm|PF06240.13 evalue:9.3e-31 score:105.7 best_domain_score:105.4 name:COXG; db:Pfam-A.hmm|PF10604.9 evalue:1.5e-09 score:37.5 best_domain_score:37.0 name:Polyketide_cyc2;
tm_num 1;
58052 57393 transmembrane_helix
ID metaerg.pl|03651
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology o57972-58040i;
60445 58049 CDS
ID metaerg.pl|03652
allec_ids 1.17.5.2;
allgo_ids GO:0016491; GO:0055114; GO:0046872;
allko_ids K03518; K11177; K13482; K13481; K03520; K00157; K00106; K00087; K11178; K03519; K21673;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Embleya;s__Embleya scabrispora;
genomedb_acc GCF_000372745.1;
genomedb_target db:genomedb|GCF_000372745.1|WP_020550887.1 1 786 evalue:0.0e+00 qcov:98.50 identity:71.60;
kegg_pathway_id 00230; 00380; 00280; 00983; 00680; 00350; 00760; 00750; 00633;
kegg_pathway_name Purine metabolism; Tryptophan metabolism; Valine, leucine and isoleucine degradation; Drug metabolism - other enzymes; Methane metabolism; Tyrosine metabolism; Nicotinate and nicotinamide metabolism; Vitamin B6 metabolism; Trinitrotoluene degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metabolic_acc TIGR02416;
metabolic_process compound:Carbon monoxide;process:CO oxidation;gene:coxL;;
pfam_acc PF01315; PF02738;
pfam_desc Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; Molybdopterin-binding domain of aldehyde dehydrogenase;
pfam_id Ald_Xan_dh_C; Ald_Xan_dh_C2;
pfam_target db:Pfam-A.hmm|PF01315.22 evalue:2.6e-22 score:78.5 best_domain_score:77.3 name:Ald_Xan_dh_C; db:Pfam-A.hmm|PF02738.18 evalue:3.2e-182 score:606.1 best_domain_score:605.8 name:Ald_Xan_dh_C2;
sprot_desc Caffeine dehydrogenase subunit alpha;
sprot_id sp|D7REY3|CDHA_PSEU3;
sprot_target db:uniprot_sprot|sp|D7REY3|CDHA_PSEU3 6 782 evalue:1.2e-112 qcov:97.40 identity:34.60;
61044 60442 CDS
ID metaerg.pl|03653
allec_ids 1.2.5.3;
allgo_ids GO:0009055; GO:0051536; GO:0051537; GO:0046872;
allko_ids K13483; K00087; K00106; K03518; K13482; K13480; K13481;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Marinactinospora;s__Marinactinospora thermotolerans;
genomedb_acc GCF_900167435.1;
genomedb_target db:genomedb|GCF_900167435.1|WP_078760063.1 9 172 evalue:2.5e-57 qcov:82.00 identity:65.90;
kegg_pathway_id 00983; 00633; 00230; 00680;
kegg_pathway_name Drug metabolism - other enzymes; Trinitrotoluene degradation; Purine metabolism; Methane metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF00111; PF01799;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain;
pfam_id Fer2; Fer2_2;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:3.1e-07 score:29.5 best_domain_score:29.5 name:Fer2; db:Pfam-A.hmm|PF01799.20 evalue:1.7e-32 score:110.5 best_domain_score:110.5 name:Fer2_2;
sprot_desc Carbon monoxide dehydrogenase small chain;
sprot_id sp|P19921|DCMS_OLICO;
sprot_target db:uniprot_sprot|sp|P19921|DCMS_OLICO 10 163 evalue:1.0e-41 qcov:77.00 identity:50.00;
61937 61041 CDS
ID metaerg.pl|03654
allec_ids 1.5.99.14;
allgo_ids GO:0016491; GO:0055114; GO:0034909; GO:0071949; GO:0019608;
allko_ids K11178; K03519; K13479; K00106; K00087; K13481; K03518; K13482; K11177; K19185;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669344.1 1 291 evalue:4.3e-98 qcov:97.70 identity:66.30;
kegg_pathway_id 00230; 00680; 00983; 00633;
kegg_pathway_name Purine metabolism; Methane metabolism; Drug metabolism - other enzymes; Trinitrotoluene degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF03450; PF00941;
pfam_desc CO dehydrogenase flavoprotein C-terminal domain; FAD binding domain in molybdopterin dehydrogenase;
pfam_id CO_deh_flav_C; FAD_binding_5;
pfam_target db:Pfam-A.hmm|PF03450.17 evalue:4.7e-18 score:64.5 best_domain_score:63.7 name:CO_deh_flav_C; db:Pfam-A.hmm|PF00941.21 evalue:8.5e-38 score:129.0 best_domain_score:128.3 name:FAD_binding_5;
sprot_desc 6-hydroxypseudooxynicotine dehydrogenase complex subunit alpha;
sprot_id sp|O87681|KDHA_PAENI;
sprot_target db:uniprot_sprot|sp|O87681|KDHA_PAENI 1 286 evalue:8.6e-45 qcov:96.00 identity:37.40;
62303 63088 CDS
ID metaerg.pl|03655
allec_ids 3.5.1.-;
allgo_ids GO:0070403; GO:0005737; GO:0017136; GO:0008270;
allko_ids K12410;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Thermomonospora;s__Thermomonospora curvata;
genomedb_acc GCF_000024385.1;
genomedb_target db:genomedb|GCF_000024385.1|WP_012852595.1 16 254 evalue:3.7e-77 qcov:91.60 identity:61.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id LYSDEGII-PWY; PWY-5327; PWY-5784; PWY-0; PWY-6548; PWY-1822;
metacyc_pathway_name L-lysine degradation III;; superpathway of L-lysine degradation;; indole-3-acetate inactivation VIII;; putrescine degradation III;; ; indole-3-acetate activation I;;
metacyc_pathway_type LYSINE-DEG;; LYSINE-DEG; Super-Pathways;; Indole-3-Acetate-Inactivation;; Putrescine-Degradation;; ; Activation;;
pfam_acc PF02146;
pfam_desc Sir2 family;
pfam_id SIR2;
pfam_target db:Pfam-A.hmm|PF02146.17 evalue:1.2e-42 score:145.0 best_domain_score:144.8 name:SIR2;
sprot_desc NAD-dependent protein deacetylase 2;
sprot_id sp|Q8CJM9|NPD2_STRCO;
sprot_target db:uniprot_sprot|sp|Q8CJM9|NPD2_STRCO 17 256 evalue:3.3e-64 qcov:92.00 identity:52.50;
63381 64043 CDS
ID metaerg.pl|03656
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Thermomonospora;s__Thermomonospora curvata;
genomedb_acc GCF_000024385.1;
genomedb_target db:genomedb|GCF_000024385.1|WP_012852745.1 1 186 evalue:5.3e-45 qcov:84.50 identity:55.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
sp YES;
63381 63509 signal_peptide
ID metaerg.pl|03657
Note TAT;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
64040 67420 CDS
ID metaerg.pl|03658
allec_ids 6.4.1.1;
allgo_ids GO:0005524; GO:0005737; GO:0005739; GO:0009374; GO:0046872; GO:0004736; GO:0006094; GO:0006090;
allko_ids K01457; K01955; K01941; K01959; K11541; K01965; K01571; K01966; K11540; K01968; K00609; K01958; K01960; K08289; K01954; K11381; K01956; K03416; K14541; K00658; K01964;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter_B;s__Rubrobacter_B xylanophilus;
genomedb_acc GCF_000014185.1;
genomedb_target db:genomedb|GCF_000014185.1|WP_011565001.1 1 1120 evalue:0.0e+00 qcov:99.50 identity:65.30;
kegg_pathway_id 00640; 00791; 00252; 00220; 00251; 00620; 00330; 00670; 00230; 00240; 00020; 00280; 00310;
kegg_pathway_name Propanoate metabolism; Atrazine degradation; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Glutamate metabolism; Pyruvate metabolism; Arginine and proline metabolism; One carbon pool by folate; Purine metabolism; Pyrimidine metabolism; Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation; Lysine degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY-6146; PWY-5750; PWY-6142; P42-PWY;
metacyc_pathway_name Methanobacterium thermoautotrophicum biosynthetic metabolism;; itaconate biosynthesis I;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; incomplete reductive TCA cycle;;
metacyc_pathway_type Biosynthesis; Super-Pathways;; Itaconate-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Reductive-TCA-Cycles;;
pfam_acc PF02222; PF02785; PF00289; PF00364; PF02786; PF07478; PF00682; PF02436;
pfam_desc ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Biotin-requiring enzyme; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus; HMGL-like; Conserved carboxylase domain;
pfam_id ATP-grasp; Biotin_carb_C; Biotin_carb_N; Biotin_lipoyl; CPSase_L_D2; Dala_Dala_lig_C; HMGL-like; PYC_OADA;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:2.1e-05 score:23.4 best_domain_score:22.6 name:ATP-grasp; db:Pfam-A.hmm|PF02785.19 evalue:2.5e-31 score:107.2 best_domain_score:105.8 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:1.5e-39 score:134.2 best_domain_score:132.7 name:Biotin_carb_N; db:Pfam-A.hmm|PF00364.22 evalue:4.3e-13 score:48.1 best_domain_score:46.9 name:Biotin_lipoyl; db:Pfam-A.hmm|PF02786.17 evalue:4.4e-69 score:231.4 best_domain_score:230.5 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:3.1e-08 score:32.6 best_domain_score:31.8 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF00682.19 evalue:6e-30 score:103.9 best_domain_score:103.1 name:HMGL-like; db:Pfam-A.hmm|PF02436.18 evalue:4.7e-45 score:153.0 best_domain_score:152.1 name:PYC_OADA;
sprot_desc Pyruvate carboxylase 1;
sprot_id sp|O17732|PYC1_CAEEL;
sprot_target db:uniprot_sprot|sp|O17732|PYC1_CAEEL 2 1124 evalue:3.1e-273 qcov:99.70 identity:45.90;
tigrfam_acc TIGR01235;
tigrfam_desc pyruvate carboxylase;
tigrfam_mainrole Energy metabolism;
tigrfam_name pyruv_carbox;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01235 evalue:0 score:1315.8 best_domain_score:1315.4 name:TIGR01235;
67717 67523 CDS
ID metaerg.pl|03659
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669066.1 1 57 evalue:4.4e-08 qcov:89.10 identity:56.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF08940;
pfam_desc Domain of unknown function (DUF1918);
pfam_id DUF1918;
pfam_target db:Pfam-A.hmm|PF08940.11 evalue:1e-07 score:30.7 best_domain_score:30.5 name:DUF1918;
69291 67861 CDS
ID metaerg.pl|03660
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664661.1 4 472 evalue:1.9e-217 qcov:98.50 identity:79.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF06545;
pfam_desc Protein of unknown function (DUF1116);
pfam_id DUF1116;
pfam_target db:Pfam-A.hmm|PF06545.11 evalue:7.1e-97 score:322.3 best_domain_score:321.8 name:DUF1116;
sprot_desc hypothetical protein;
sprot_id sp|P77221|YAHG_ECOLI;
sprot_target db:uniprot_sprot|sp|P77221|YAHG_ECOLI 13 464 evalue:2.7e-101 qcov:95.00 identity:42.90;
70921 69407 CDS
ID metaerg.pl|03661
allgo_ids GO:0048037; GO:0016021; GO:0005886; GO:0003824; GO:0071973;
allko_ids K02381;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664663.1 1 503 evalue:9.0e-173 qcov:99.80 identity:68.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF02629; PF00549;
pfam_desc CoA binding domain; CoA-ligase;
pfam_id CoA_binding; Ligase_CoA;
pfam_target db:Pfam-A.hmm|PF02629.19 evalue:8.5e-06 score:25.6 best_domain_score:21.2 name:CoA_binding; db:Pfam-A.hmm|PF00549.19 evalue:3e-44 score:149.7 best_domain_score:146.8 name:Ligase_CoA;
sprot_desc hypothetical protein;
sprot_id sp|Q47208|FDRA_ECOLI;
sprot_target db:uniprot_sprot|sp|Q47208|FDRA_ECOLI 4 503 evalue:5.3e-71 qcov:99.20 identity:39.00;
72031 71036 CDS
ID metaerg.pl|03662
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441175.1 23 330 evalue:7.5e-43 qcov:93.10 identity:45.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF11392;
pfam_desc Protein of unknown function (DUF2877);
pfam_id DUF2877;
pfam_target db:Pfam-A.hmm|PF11392.8 evalue:2.5e-23 score:82.1 best_domain_score:81.3 name:DUF2877;
sp YES;
71036 71137 signal_peptide
ID metaerg.pl|03663
Note TAT;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
72972 72028 CDS
ID metaerg.pl|03664
allec_ids 2.7.2.2;
allgo_ids GO:0005829; GO:0005524; GO:0008804; GO:0019546;
allko_ids K00926;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664667.1 1 312 evalue:6.5e-121 qcov:99.40 identity:72.80;
kegg_pathway_id 00230; 00251; 00330; 00910;
kegg_pathway_name Purine metabolism; Glutamate metabolism; Arginine and proline metabolism; Nitrogen metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id CITRULLINE-DEG-PWY; ARGORNPROST-PWY; ARGDEGRAD-PWY;
metacyc_pathway_name L-citrulline degradation;; L-arginine degradation (Stickland reaction);; L-arginine degradation V (arginine deiminase pathway);;
metacyc_pathway_type MISCELLANEOUS-DEG;; ARGININE-DEG; Super-Pathways;; ARGININE-DEG; Super-Pathways;;
pfam_acc PF00696;
pfam_desc Amino acid kinase family;
pfam_id AA_kinase;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:1.1e-28 score:99.7 best_domain_score:97.5 name:AA_kinase;
sprot_desc Carbamate kinase;
sprot_id sp|Q5JHG5|CPKA_THEKO;
sprot_target db:uniprot_sprot|sp|Q5JHG5|CPKA_THEKO 3 312 evalue:5.5e-74 qcov:98.70 identity:46.80;
74741 73281 CDS
ID metaerg.pl|03665
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016324; GO:0009925; GO:0005737; GO:0005887; GO:0005886; GO:0008520; GO:0015229; GO:0070890; GO:0019852; GO:0015882; GO:0006979; GO:0070904;
allko_ids K14611;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441176.1 1 484 evalue:1.0e-173 qcov:99.60 identity:67.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF00860;
pfam_desc Permease family;
pfam_id Xan_ur_permease;
pfam_target db:Pfam-A.hmm|PF00860.20 evalue:1.4e-81 score:273.4 best_domain_score:272.8 name:Xan_ur_permease;
sprot_desc Solute carrier family 23 member 2;
sprot_id sp|Q9WTW8|S23A2_RAT;
sprot_target db:uniprot_sprot|sp|Q9WTW8|S23A2_RAT 9 465 evalue:1.5e-70 qcov:94.00 identity:37.50;
tm_num 12;
74741 73281 transmembrane_helix
ID metaerg.pl|03666
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology i73362-73430o73458-73526i73539-73607o73617-73685i73704-73772o73785-73844i73857-73925o74022-74090i74292-74360o74370-74438i74472-74525o74568-74636i;
76164 75061 CDS
ID metaerg.pl|03667
allec_ids 3.5.2.1; 3.5.2.-;
allgo_ids GO:0016812; GO:0047694; GO:0046872; GO:0006212;
allko_ids K19794;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441177.1 1 367 evalue:1.0e-178 qcov:100.00 identity:84.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id P164-PWY; PWY-6426; P621-PWY; PWY-5497;
metacyc_pathway_name purine nucleobases degradation I (anaerobic);; uracil degradation II (oxidative);; nylon-6 oligomer degradation;; purine nucleobases degradation II (anaerobic);;
metacyc_pathway_type Fermentation; Purine-Degradation;; Uracil-Degradation;; Other-Degradation;; Fermentation; Purine-Degradation;;
pfam_acc PF09663;
pfam_desc Amidohydrolase ring-opening protein (Amido_AtzD_TrzD);
pfam_id Amido_AtzD_TrzD;
pfam_target db:Pfam-A.hmm|PF09663.10 evalue:3.1e-142 score:473.1 best_domain_score:472.9 name:Amido_AtzD_TrzD;
sprot_desc Barbiturase;
sprot_id sp|Q8RSQ2|BAH_RHOER;
sprot_target db:uniprot_sprot|sp|Q8RSQ2|BAH_RHOER 4 364 evalue:2.5e-139 qcov:98.40 identity:71.20;
tigrfam_acc TIGR02714;
tigrfam_desc ring-opening amidohydrolases;
tigrfam_name amido_AtzD_TrzD;
tigrfam_target db:TIGRFAMs.hmm|TIGR02714 evalue:3.8e-157 score:522.1 best_domain_score:521.9 name:TIGR02714;
76284 77963 CDS
ID metaerg.pl|03668
allgo_ids GO:0043565; GO:0003677; GO:0006144;
allko_ids K09684;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664677.1 30 559 evalue:4.6e-194 qcov:94.80 identity:66.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF17853; PF13556; PF02954; PF07905;
pfam_desc GGDEF-like domain; PucR C-terminal helix-turn-helix domain; Bacterial regulatory protein, Fis family; Purine catabolism regulatory protein-like family;
pfam_id GGDEF_2; HTH_30; HTH_8; PucR;
pfam_target db:Pfam-A.hmm|PF17853.1 evalue:7.4e-16 score:57.7 best_domain_score:57.7 name:GGDEF_2; db:Pfam-A.hmm|PF13556.6 evalue:1.5e-18 score:65.6 best_domain_score:64.3 name:HTH_30; db:Pfam-A.hmm|PF02954.19 evalue:1.7e-06 score:26.9 best_domain_score:24.8 name:HTH_8; db:Pfam-A.hmm|PF07905.11 evalue:3.2e-34 score:116.9 best_domain_score:114.7 name:PucR;
sprot_desc Purine catabolism regulatory protein;
sprot_id sp|O32138|PUCR_BACSU;
sprot_target db:uniprot_sprot|sp|O32138|PUCR_BACSU 37 548 evalue:4.4e-42 qcov:91.60 identity:24.40;
78746 77979 CDS
ID metaerg.pl|03669
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668786.1 3 248 evalue:4.5e-72 qcov:96.50 identity:59.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF05050;
pfam_desc Methyltransferase FkbM domain;
pfam_id Methyltransf_21;
pfam_target db:Pfam-A.hmm|PF05050.12 evalue:3e-21 score:75.4 best_domain_score:75.1 name:Methyltransf_21;
tigrfam_acc TIGR01444;
tigrfam_desc methyltransferase, FkbM family;
tigrfam_name fkbM_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01444 evalue:1.5e-24 score:86.2 best_domain_score:85.9 name:TIGR01444;
79408 78758 CDS
ID metaerg.pl|03670
allec_ids 4.-.-.-;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0016829;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441965.1 3 212 evalue:8.9e-53 qcov:97.20 identity:55.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY1A0-6325;
metacyc_pathway_name actinorhodin biosynthesis;;
metacyc_pathway_type Antibiotic-Biosynthesis;;
pfam_acc PF01073; PF01370; PF13460; PF05368;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; NAD(P)H-binding ; NmrA-like family;
pfam_id 3Beta_HSD; Epimerase; NAD_binding_10; NmrA;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:4.9e-07 score:28.3 best_domain_score:28.1 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:1e-09 score:37.5 best_domain_score:36.7 name:Epimerase; db:Pfam-A.hmm|PF13460.6 evalue:1.6e-43 score:148.0 best_domain_score:147.7 name:NAD_binding_10; db:Pfam-A.hmm|PF05368.13 evalue:8.6e-12 score:44.3 best_domain_score:42.0 name:NmrA;
sprot_desc Uncharacterized sugar epimerase YhfK;
sprot_id sp|O07609|YHFK_BACSU;
sprot_target db:uniprot_sprot|sp|O07609|YHFK_BACSU 1 212 evalue:3.2e-33 qcov:98.10 identity:40.70;
79747 80166 CDS
ID metaerg.pl|03671
allgo_ids GO:0055114;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA3495;f__UBA3495;g__UBA1141;s__UBA1141 sp002816455;
genomedb_acc GCA_002816455.1;
genomedb_target db:genomedb|GCA_002816455.1|PKB67091.1 14 127 evalue:1.7e-09 qcov:82.00 identity:39.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF13911;
pfam_desc AhpC/TSA antioxidant enzyme;
pfam_id AhpC-TSA_2;
pfam_target db:Pfam-A.hmm|PF13911.6 evalue:1.3e-08 score:34.1 best_domain_score:33.8 name:AhpC-TSA_2;
80185 81621 CDS
ID metaerg.pl|03672
allec_ids 1.16.1.1;
allgo_ids GO:0016491; GO:0055114; GO:0005623; GO:0009055; GO:0050660; GO:0016152; GO:0045340; GO:0050661; GO:0016668; GO:0045454; GO:0050787; GO:0030001;
allko_ids K00264; K00384; K00176; K03388; K00383; K00266; K01008; K00382; K00362; K00363; K03885; K00219; K00356; K00302;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Palsa-465;s__Palsa-465 sp003244035;
genomedb_acc GCA_003244035.1;
genomedb_target db:genomedb|GCA_003244035.1|PZS09982.1 5 471 evalue:1.6e-131 qcov:97.70 identity:56.50;
kegg_pathway_id 00720; 00480; 00280; 00010; 00240; 00020; 00260; 00251; 00252; 00620; 00450; 00910; 00190; 00790;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Glutathione metabolism; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Pyrimidine metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Selenoamino acid metabolism; Nitrogen metabolism; Oxidative phosphorylation; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id P641-PWY;
metacyc_pathway_name phenylmercury acetate degradation;;
metacyc_pathway_type Mercury-Detoxification;;
pfam_acc PF00890; PF12831; PF01134; PF03486; PF13450; PF00070; PF07992; PF13738; PF02852;
pfam_desc FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id FAD_binding_2; FAD_oxidored; GIDA; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:2.4e-05 score:22.8 best_domain_score:22.8 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:4.7e-11 score:41.9 best_domain_score:32.4 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:2e-11 score:42.8 best_domain_score:31.6 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:5e-08 score:31.3 best_domain_score:21.3 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:6.6e-06 score:25.5 best_domain_score:21.2 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:1.1e-21 score:76.4 best_domain_score:63.1 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:3.9e-62 score:209.3 best_domain_score:209.0 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:1e-08 score:34.0 best_domain_score:23.1 name:Pyr_redox_3; db:Pfam-A.hmm|PF02852.22 evalue:2.9e-21 score:75.0 best_domain_score:72.7 name:Pyr_redox_dim;
sp YES;
sprot_desc Mercuric reductase;
sprot_id sp|P16171|MERA_BACCE;
sprot_target db:uniprot_sprot|sp|P16171|MERA_BACCE 5 452 evalue:1.1e-68 qcov:93.70 identity:35.60;
80185 80253 signal_peptide
ID metaerg.pl|03673
Note TAT;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
82501 81641 CDS
ID metaerg.pl|03674
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora pacifica_A;
genomedb_acc GCF_000378825.1;
genomedb_target db:genomedb|GCF_000378825.1|WP_018217403.1 17 237 evalue:1.8e-40 qcov:77.30 identity:48.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF09335;
pfam_desc SNARE associated Golgi protein;
pfam_id SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF09335.11 evalue:6.9e-25 score:87.1 best_domain_score:87.1 name:SNARE_assoc;
tm_num 6;
82501 81641 transmembrane_helix
ID metaerg.pl|03675
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology i81716-81784o81827-81895i81914-81982o82094-82162i82175-82243o82253-82321i;
82681 82755 tRNA
ID metaerg.pl|03676
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
name tRNA_Arg_tct;
82936 84549 CDS
ID metaerg.pl|03677
allgo_ids GO:0005975; GO:0016773;
allko_ids K00853;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Kineosporiaceae;g__Kineosporia;s__Kineosporia aurantiaca;
genomedb_acc GCA_000719025.1;
genomedb_target db:genomedb|GCA_000719025.1|JODP01000024.1_21 6 536 evalue:4.9e-209 qcov:98.90 identity:70.10;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF02782; PF00370;
pfam_desc FGGY family of carbohydrate kinases, C-terminal domain; FGGY family of carbohydrate kinases, N-terminal domain;
pfam_id FGGY_C; FGGY_N;
pfam_target db:Pfam-A.hmm|PF02782.16 evalue:3.7e-24 score:84.8 best_domain_score:83.9 name:FGGY_C; db:Pfam-A.hmm|PF00370.21 evalue:7.2e-14 score:51.2 best_domain_score:47.8 name:FGGY_N;
85349 84600 CDS
ID metaerg.pl|03678
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668549.1 4 236 evalue:8.1e-50 qcov:93.60 identity:49.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF12697;
pfam_desc Alpha/beta hydrolase family;
pfam_id Abhydrolase_6;
pfam_target db:Pfam-A.hmm|PF12697.7 evalue:9.2e-14 score:51.8 best_domain_score:51.6 name:Abhydrolase_6;
85500 86108 CDS
ID metaerg.pl|03679
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces castelarensis;
genomedb_acc GCF_002154275.1;
genomedb_target db:genomedb|GCF_002154275.1|WP_059145553.1 3 189 evalue:1.3e-18 qcov:92.60 identity:34.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF17754; PF00440;
pfam_desc MftR C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_14; TetR_N;
pfam_target db:Pfam-A.hmm|PF17754.1 evalue:1.5e-09 score:37.0 best_domain_score:36.5 name:TetR_C_14; db:Pfam-A.hmm|PF00440.23 evalue:1.5e-09 score:36.7 best_domain_score:36.7 name:TetR_N;
86733 86170 CDS
ID metaerg.pl|03680
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus koreensis;
genomedb_acc GCF_002901445.1;
genomedb_target db:genomedb|GCF_002901445.1|WP_103312433.1 1 183 evalue:6.3e-55 qcov:97.90 identity:60.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF01738;
pfam_desc Dienelactone hydrolase family;
pfam_id DLH;
pfam_target db:Pfam-A.hmm|PF01738.18 evalue:4.6e-12 score:45.2 best_domain_score:42.1 name:DLH;
sp YES;
86170 86232 signal_peptide
ID metaerg.pl|03681
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
88070 86841 CDS
ID metaerg.pl|03682
allgo_ids GO:0016021; GO:0055085;
allko_ids K02575; K08177; K08217; K08219;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora sp003236335;
genomedb_acc GCF_003236335.1;
genomedb_target db:genomedb|GCF_003236335.1|WP_111134323.1 6 389 evalue:7.8e-66 qcov:93.90 identity:46.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:1.9e-22 score:78.9 best_domain_score:45.6 name:MFS_1;
tm_num 11;
88070 86841 transmembrane_helix
ID metaerg.pl|03683
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology o86892-86960i86994-87062o87090-87158i87258-87326o87336-87404i87465-87533o87561-87629i87663-87731o87741-87809i87846-87914o87924-87992i;
88290 88739 CDS
ID metaerg.pl|03684
allec_ids 4.2.3.3;
allgo_ids GO:0008929; GO:0019242;
allko_ids K01734;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Palsa-506;s__Palsa-506 sp003168215;
genomedb_acc GCA_003168215.1;
genomedb_target db:genomedb|GCA_003168215.1|PMSW01000041.1_22 2 126 evalue:4.0e-44 qcov:83.90 identity:72.00;
kegg_pathway_id 00620;
kegg_pathway_name Pyruvate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF02142;
pfam_desc MGS-like domain;
pfam_id MGS;
pfam_target db:Pfam-A.hmm|PF02142.22 evalue:2.2e-15 score:55.9 best_domain_score:55.5 name:MGS;
sprot_desc Methylglyoxal synthase;
sprot_id sp|C5BDP0|MGSA_EDWI9;
sprot_target db:uniprot_sprot|sp|C5BDP0|MGSA_EDWI9 4 129 evalue:1.9e-40 qcov:84.60 identity:62.70;
tigrfam_acc TIGR00160;
tigrfam_desc methylglyoxal synthase;
tigrfam_mainrole Energy metabolism;
tigrfam_name MGSA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00160 evalue:6.7e-48 score:161.5 best_domain_score:161.2 name:TIGR00160;
88867 89991 CDS
ID metaerg.pl|03685
allec_ids 2.2.1.2;
allgo_ids GO:0005975; GO:0005737; GO:0004801; GO:0006098;
allko_ids K00616;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__RSA1;s__RSA1 sp002919305;
genomedb_acc GCA_002919305.1;
genomedb_target db:genomedb|GCA_002919305.1|PKFB01000078.1_29 9 368 evalue:4.1e-138 qcov:96.30 identity:71.40;
kegg_pathway_id 00030;
kegg_pathway_name Pentose phosphate pathway;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id NONOXIPENT-PWY; P124-PWY; P185-PWY; PWY-1861; PWY-5723; PENTOSE-P-PWY;
metacyc_pathway_name pentose phosphate pathway (non-oxidative branch);; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; formaldehyde assimilation II (assimilatory RuMP Cycle);; Rubisco shunt;; pentose phosphate pathway;;
metacyc_pathway_type Pentose-Phosphate-Cycle;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; Formaldehyde-Assimilation;; Energy-Metabolism;; Pentose-Phosphate-Cycle; Super-Pathways;;
pfam_acc PF00923;
pfam_desc Transaldolase/Fructose-6-phosphate aldolase;
pfam_id TAL_FSA;
pfam_target db:Pfam-A.hmm|PF00923.19 evalue:4e-81 score:271.8 best_domain_score:271.6 name:TAL_FSA;
sprot_desc Transaldolase;
sprot_id sp|Q47ND3|TAL_THEFY;
sprot_target db:uniprot_sprot|sp|Q47ND3|TAL_THEFY 7 369 evalue:2.0e-131 qcov:97.10 identity:66.70;
tigrfam_acc TIGR00876;
tigrfam_desc transaldolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tal_mycobact;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00876 evalue:1e-128 score:428.8 best_domain_score:428.6 name:TIGR00876;
90050 91546 CDS
ID metaerg.pl|03686
allec_ids 5.4.2.2;
allgo_ids GO:0005975; GO:0016868; GO:0000287; GO:0004614; GO:0004615; GO:0042121; GO:0009298; GO:0009103;
allko_ids K01835; K01842; K01840; K00966; K03431; K15778;
genomedb_OC d__Bacteria;p__Patescibacteria;c__ABY1;o__UBA9629;f__UBA9629;g__UBA9629;s__UBA9629 sp001818235;
genomedb_acc GCA_001818235.1;
genomedb_target db:genomedb|GCA_001818235.1|OGY76782.1 32 493 evalue:5.3e-101 qcov:92.80 identity:41.70;
kegg_pathway_id 00052; 00530; 00500; 00521; 00051; 00010; 00030;
kegg_pathway_name Galactose metabolism; Aminosugars metabolism; Starch and sucrose metabolism; Streptomycin biosynthesis; Fructose and mannose metabolism; Glycolysis / Gluconeogenesis; Pentose phosphate pathway;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY-842; PWY-5661; GLYCOCAT-PWY; PWY-5767; PWY-622; SUCSYN-PWY; PWY-5940; PWY-5941; PWY-3801; PWY-621; PWY-5384;
metacyc_pathway_name starch degradation I;; GDP-glucose biosynthesis;; glycogen degradation I;; ; starch biosynthesis;; sucrose biosynthesis I (from photosynthesis);; streptomycin biosynthesis;; glycogen degradation II;; sucrose degradation II (sucrose synthase);; sucrose degradation III (sucrose invertase);; sucrose degradation IV (sucrose phosphorylase);;
metacyc_pathway_type Glycan-Degradation; Starch-Degradation;; GDP-Sugar-Biosynthesis;; Glycan-Degradation; Glycogen-Degradation;; ; GLYCOGEN-BIOSYN;; Sucrose-Biosynthesis; Super-Pathways;; Antibiotic-Biosynthesis;; Glycan-Degradation; Glycogen-Degradation;; SUCROSE-DEG;; SUCROSE-DEG;; SUCROSE-DEG;;
pfam_acc PF02878; PF02879; PF02880; PF00408;
pfam_desc Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain;
pfam_id PGM_PMM_I; PGM_PMM_II; PGM_PMM_III; PGM_PMM_IV;
pfam_target db:Pfam-A.hmm|PF02878.16 evalue:2.2e-28 score:97.9 best_domain_score:97.2 name:PGM_PMM_I; db:Pfam-A.hmm|PF02879.16 evalue:1.4e-19 score:69.9 best_domain_score:68.7 name:PGM_PMM_II; db:Pfam-A.hmm|PF02880.16 evalue:6.7e-25 score:86.7 best_domain_score:86.0 name:PGM_PMM_III; db:Pfam-A.hmm|PF00408.20 evalue:1.8e-07 score:30.5 best_domain_score:29.1 name:PGM_PMM_IV;
sprot_desc Phosphomannomutase/phosphoglucomutase;
sprot_id sp|Q88BD4|ALGC_PSESM;
sprot_target db:uniprot_sprot|sp|Q88BD4|ALGC_PSESM 29 472 evalue:1.5e-78 qcov:89.20 identity:38.50;
91647 93881 CDS
ID metaerg.pl|03687
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667563.1 220 744 evalue:2.7e-80 qcov:70.60 identity:42.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF12229; PF04294;
pfam_desc Putative peptidoglycan binding domain; VanW like protein;
pfam_id PG_binding_4; VanW;
pfam_target db:Pfam-A.hmm|PF12229.8 evalue:6.4e-09 score:35.3 best_domain_score:14.8 name:PG_binding_4; db:Pfam-A.hmm|PF04294.13 evalue:2.2e-35 score:120.4 best_domain_score:119.4 name:VanW;
tm_num 1;
91647 93881 transmembrane_helix
ID metaerg.pl|03688
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology i91683-91751o;
96507 93964 CDS
ID metaerg.pl|03689
allgo_ids GO:0016020;
allko_ids K02004; K09808; K09811;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108667947.1 1 847 evalue:1.4e-149 qcov:100.00 identity:43.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF02687; PF12704;
pfam_desc FtsX-like permease family; MacB-like periplasmic core domain;
pfam_id FtsX; MacB_PCD;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:1.1e-20 score:73.1 best_domain_score:44.9 name:FtsX; db:Pfam-A.hmm|PF12704.7 evalue:6.3e-17 score:61.8 best_domain_score:39.1 name:MacB_PCD;
sp YES;
tm_num 10;
93964 94062 signal_peptide
ID metaerg.pl|03690
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
96507 93964 transmembrane_helix
ID metaerg.pl|03691
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology i94009-94077o94795-94863i94924-94992o95056-95124i95221-95274o95284-95352i95449-95517o96124-96192i96280-96348o96391-96459i;
97348 96581 CDS
ID metaerg.pl|03692
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016887; GO:0016021; GO:0005886; GO:0015562; GO:0015893; GO:0046677;
allko_ids K02052; K02006; K02004; K01997; K02003; K02010; K05847; K02032; K02017; K11084; K10199; K06861; K02071; K01996; K02045; K11072; K02068; K09810; K10112; K01998; K10111; K01995; K02065; K02049; K10235; K05816; K02023; K02018; K01990; K10243; K09812; K02000; K11962; K05685;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Sporichthyales;f__Sporichthyaceae;g__Sporichthya;s__Sporichthya polymorpha;
genomedb_acc GCF_000384115.1;
genomedb_target db:genomedb|GCF_000384115.1|WP_084671069.1 4 254 evalue:2.1e-85 qcov:98.40 identity:64.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6135; PWY-6171; PWY-6166; PWY-6188;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.1e-32 score:112.6 best_domain_score:112.2 name:ABC_tran;
sprot_desc Macrolide export ATP-binding/permease protein MacB;
sprot_id sp|A1U0A9|MACB_MARHV;
sprot_target db:uniprot_sprot|sp|A1U0A9|MACB_MARHV 20 240 evalue:9.6e-53 qcov:86.70 identity:48.00;
97532 98113 CDS
ID metaerg.pl|03693
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441982.1 6 191 evalue:1.5e-64 qcov:96.40 identity:72.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF17932; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_24; TetR_N;
pfam_target db:Pfam-A.hmm|PF17932.1 evalue:4.1e-17 score:61.7 best_domain_score:61.2 name:TetR_C_24; db:Pfam-A.hmm|PF00440.23 evalue:1.1e-14 score:53.2 best_domain_score:52.5 name:TetR_N;
99118 98198 CDS
ID metaerg.pl|03694
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0008643;
allko_ids K02026; K17236;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441731.1 8 306 evalue:1.6e-84 qcov:97.70 identity:61.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.5e-10 score:38.8 best_domain_score:38.8 name:BPD_transp_1;
sprot_desc L-arabinose transport system permease protein AraQ;
sprot_id sp|Q9KEE9|ARAQ_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KEE9|ARAQ_BACHD 52 303 evalue:7.5e-28 qcov:82.40 identity:32.20;
tm_num 6;
99118 98198 transmembrane_helix
ID metaerg.pl|03695
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology i98315-98383o98510-98578i98597-98665o98708-98776i98837-98905o99008-99076i;
99999 99115 CDS
ID metaerg.pl|03696
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0008643;
allko_ids K02025; K10109; K10233;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW09269.1 10 292 evalue:1.2e-97 qcov:96.30 identity:64.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:2.3e-14 score:52.8 best_domain_score:52.8 name:BPD_transp_1;
sprot_desc Alpha-glucoside transport system permease protein AglF;
sprot_id sp|Q9Z3R6|AGLF_RHIME;
sprot_target db:uniprot_sprot|sp|Q9Z3R6|AGLF_RHIME 11 226 evalue:5.4e-15 qcov:73.50 identity:29.30;
tm_num 6;
99999 99115 transmembrane_helix
ID metaerg.pl|03697
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology i99133-99201o99244-99312i99436-99504o99562-99630i99691-99759o99895-99963i;
101438 100089 CDS
ID metaerg.pl|03698
allko_ids K10117; K02027;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667571.1 35 449 evalue:4.3e-134 qcov:92.40 identity:55.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF01547; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:4.2e-28 score:98.4 best_domain_score:97.9 name:SBP_bac_1; db:Pfam-A.hmm|PF13416.6 evalue:5.3e-32 score:111.0 best_domain_score:110.4 name:SBP_bac_8;
sp YES;
100089 100145 lipoprotein_signal_peptide
ID metaerg.pl|03699
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
101672 102823 CDS
ID metaerg.pl|03700
allec_ids 3.5.1.-; 3.5.1.25;
allgo_ids GO:0016787; GO:0046872; GO:0008448; GO:0005975; GO:0006044;
allko_ids K01443; K02079;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA6663;g__UBA6663;s__UBA6663 sp002455335;
genomedb_acc GCA_002455335.1;
genomedb_target db:genomedb|GCA_002455335.1|DKKP01000399.1_8 1 379 evalue:3.6e-105 qcov:99.00 identity:53.40;
kegg_pathway_id 00530; 00052;
kegg_pathway_name Aminosugars metabolism; Galactose metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY-6548; PWY-5784; PWY-6517; P441-PWY; PWY-5327; PWY-1822; GLUAMCAT-PWY; PWY-0; LYSDEGII-PWY;
metacyc_pathway_name ; indole-3-acetate inactivation VIII;; N-acetylglucosamine degradation II;; superpathway of N-acetylneuraminate degradation;; superpathway of L-lysine degradation;; indole-3-acetate activation I;; N-acetylglucosamine degradation I;; putrescine degradation III;; L-lysine degradation III;;
metacyc_pathway_type ; Indole-3-Acetate-Inactivation;; N-Acetylglucosamine-Degradation; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; LYSINE-DEG; Super-Pathways;; Activation;; N-Acetylglucosamine-Degradation;; Putrescine-Degradation;; LYSINE-DEG;;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:2.3e-26 score:92.2 best_domain_score:90.0 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:9.5e-14 score:50.9 best_domain_score:37.4 name:Amidohydro_3;
sprot_desc N-acetylgalactosamine-6-phosphate deacetylase;
sprot_id sp|Q8XAC3|AGAA_ECO57;
sprot_target db:uniprot_sprot|sp|Q8XAC3|AGAA_ECO57 5 379 evalue:1.6e-56 qcov:97.90 identity:37.90;
tigrfam_acc TIGR00221;
tigrfam_desc N-acetylglucosamine-6-phosphate deacetylase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name nagA;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR00221 evalue:3e-90 score:302.1 best_domain_score:301.9 name:TIGR00221;
104174 102855 CDS
ID metaerg.pl|03701
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667566.1 9 438 evalue:4.6e-165 qcov:97.90 identity:68.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF07075;
pfam_desc Protein of unknown function (DUF1343);
pfam_id DUF1343;
pfam_target db:Pfam-A.hmm|PF07075.11 evalue:1.8e-129 score:431.4 best_domain_score:431.2 name:DUF1343;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P40407|YBBC_BACSU;
sprot_target db:uniprot_sprot|sp|P40407|YBBC_BACSU 57 438 evalue:1.2e-100 qcov:87.00 identity:49.10;
tm_num 1;
102855 102947 signal_peptide
ID metaerg.pl|03702
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
104174 102855 transmembrane_helix
ID metaerg.pl|03703
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
topology i102873-102926o;
105186 104305 CDS
ID metaerg.pl|03704
allgo_ids GO:0003700; GO:0006355; GO:0097367; GO:0003677; GO:1901135;
allko_ids K00845;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Actinopolymorphaceae;g__Actinopolymorpha;s__Actinopolymorpha cephalotaxi;
genomedb_acc GCF_900113145.1;
genomedb_target db:genomedb|GCF_900113145.1|WP_092880287.1 3 288 evalue:2.0e-87 qcov:97.60 identity:63.00;
kegg_pathway_id 00010; 00521; 00500; 00052;
kegg_pathway_name Glycolysis / Gluconeogenesis; Streptomycin biosynthesis; Starch and sucrose metabolism; Galactose metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF01418; PF01380;
pfam_desc Helix-turn-helix domain, rpiR family; SIS domain;
pfam_id HTH_6; SIS;
pfam_target db:Pfam-A.hmm|PF01418.17 evalue:5.5e-17 score:60.8 best_domain_score:59.8 name:HTH_6; db:Pfam-A.hmm|PF01380.22 evalue:1.8e-19 score:69.1 best_domain_score:68.6 name:SIS;
sprot_desc Uncharacterized HTH-type transcriptional regulator TTE0211;
sprot_id sp|Q8RD36|Y211_CALS4;
sprot_target db:uniprot_sprot|sp|Q8RD36|Y211_CALS4 11 288 evalue:3.7e-48 qcov:94.90 identity:39.90;
106997 105186 CDS
ID metaerg.pl|03705
allec_ids 3.2.1.52;
allgo_ids GO:0004553; GO:0005975; GO:0005618; GO:0005576; GO:0005886; GO:0004563; GO:0102148; GO:0071555; GO:0009252; GO:0009254; GO:0008360;
allko_ids K05349; K01207; K01188; K04042;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667564.1 6 603 evalue:3.6e-184 qcov:99.20 identity:57.40;
kegg_pathway_id 00940; 00460; 00530; 00500; 01032;
kegg_pathway_name Phenylpropanoid biosynthesis; Cyanoamino acid metabolism; Aminosugars metabolism; Starch and sucrose metabolism; Glycan structures - degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY-6573;
metacyc_pathway_name chondroitin sulfate degradation (metazoa);;
metacyc_pathway_type Glycan-Degradation; Glycosaminoglycan-Degradation;;
pfam_acc PF00933; PF01915;
pfam_desc Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 C-terminal domain;
pfam_id Glyco_hydro_3; Glyco_hydro_3_C;
pfam_target db:Pfam-A.hmm|PF00933.21 evalue:2.6e-104 score:348.3 best_domain_score:347.9 name:Glyco_hydro_3; db:Pfam-A.hmm|PF01915.22 evalue:1.9e-13 score:50.1 best_domain_score:48.2 name:Glyco_hydro_3_C;
sp YES;
sprot_desc Beta-hexosaminidase;
sprot_id sp|P40406|NAGZ_BACSU;
sprot_target db:uniprot_sprot|sp|P40406|NAGZ_BACSU 1 602 evalue:2.1e-82 qcov:99.80 identity:32.20;
105186 105260 signal_peptide
ID metaerg.pl|03706
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
108002 107127 CDS
ID metaerg.pl|03707
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Amphibacillaceae;g__Lentibacillus;s__Lentibacillus halodurans;
genomedb_acc GCF_900112045.1;
genomedb_target db:genomedb|GCF_900112045.1|WP_090235724.1 41 290 evalue:2.3e-72 qcov:85.90 identity:55.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF03372;
pfam_desc Endonuclease/Exonuclease/phosphatase family;
pfam_id Exo_endo_phos;
pfam_target db:Pfam-A.hmm|PF03372.23 evalue:4.7e-15 score:55.0 best_domain_score:53.6 name:Exo_endo_phos;
sp YES;
107127 107198 signal_peptide
ID metaerg.pl|03708
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
109995 108169 CDS
ID metaerg.pl|03709
allec_ids 3.2.1.52;
allgo_ids GO:0004553; GO:0005975; GO:0005618; GO:0005576; GO:0005886; GO:0004563; GO:0102148; GO:0071555; GO:0009252; GO:0009254; GO:0008360;
allko_ids K01188; K05349; K01207;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter_B;s__Rubrobacter_B xylanophilus;
genomedb_acc GCF_000014185.1;
genomedb_target db:genomedb|GCF_000014185.1|WP_011563617.1 37 608 evalue:1.5e-166 qcov:94.10 identity:54.80;
kegg_pathway_id 00500; 00530; 00460; 00940; 01032;
kegg_pathway_name Starch and sucrose metabolism; Aminosugars metabolism; Cyanoamino acid metabolism; Phenylpropanoid biosynthesis; Glycan structures - degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
metacyc_pathway_id PWY-6573;
metacyc_pathway_name chondroitin sulfate degradation (metazoa);;
metacyc_pathway_type Glycan-Degradation; Glycosaminoglycan-Degradation;;
pfam_acc PF00933; PF01915;
pfam_desc Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 C-terminal domain;
pfam_id Glyco_hydro_3; Glyco_hydro_3_C;
pfam_target db:Pfam-A.hmm|PF00933.21 evalue:1.3e-104 score:349.3 best_domain_score:348.9 name:Glyco_hydro_3; db:Pfam-A.hmm|PF01915.22 evalue:6e-17 score:61.5 best_domain_score:60.2 name:Glyco_hydro_3_C;
sp YES;
sprot_desc Beta-hexosaminidase;
sprot_id sp|P40406|NAGZ_BACSU;
sprot_target db:uniprot_sprot|sp|P40406|NAGZ_BACSU 56 606 evalue:4.4e-80 qcov:90.60 identity:32.50;
108169 108258 signal_peptide
ID metaerg.pl|03710
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
111865 110063 CDS
ID metaerg.pl|03711
allgo_ids GO:0006508; GO:0008233;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667567.1 42 600 evalue:3.0e-167 qcov:93.20 identity:57.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF00144; PF05547;
pfam_desc Beta-lactamase; Immune inhibitor A peptidase M6;
pfam_id Beta-lactamase; Peptidase_M6;
pfam_target db:Pfam-A.hmm|PF00144.24 evalue:3.2e-72 score:242.8 best_domain_score:242.2 name:Beta-lactamase; db:Pfam-A.hmm|PF05547.11 evalue:4.3e-15 score:54.3 best_domain_score:53.9 name:Peptidase_M6;
sp YES;
110063 110146 signal_peptide
ID metaerg.pl|03712
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
112157 112951 CDS
ID metaerg.pl|03713
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0003677;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Chloroflexia;o__Thermomicrobiales;f__Thermomicrobiaceae;g__HRBIN26;s__HRBIN26 sp002898875;
genomedb_acc GCA_002898875.1;
genomedb_target db:genomedb|GCA_002898875.1|GBD16970.1 20 250 evalue:3.8e-45 qcov:87.50 identity:47.20;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF00392; PF07702;
pfam_desc Bacterial regulatory proteins, gntR family; UTRA domain;
pfam_id GntR; UTRA;
pfam_target db:Pfam-A.hmm|PF00392.21 evalue:1.5e-15 score:55.8 best_domain_score:54.7 name:GntR; db:Pfam-A.hmm|PF07702.13 evalue:5.2e-44 score:148.7 best_domain_score:148.7 name:UTRA;
sprot_desc HTH-type transcriptional repressor DasR;
sprot_id sp|Q8VV01|DASR_STRGR;
sprot_target db:uniprot_sprot|sp|Q8VV01|DASR_STRGR 1 251 evalue:1.6e-39 qcov:95.10 identity:40.50;
113390 112965 CDS
ID metaerg.pl|03714
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052670057.1 14 137 evalue:2.2e-36 qcov:87.90 identity:68.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF03061;
pfam_desc Thioesterase superfamily;
pfam_id 4HBT;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:6.4e-12 score:44.9 best_domain_score:43.0 name:4HBT;
tigrfam_acc TIGR00369; TIGR02286;
tigrfam_desc uncharacterized domain 1; phenylacetic acid degradation protein PaaD;
tigrfam_name unchar_dom_1; PaaD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00369 evalue:2.7e-16 score:58.9 best_domain_score:58.5 name:TIGR00369; db:TIGRFAMs.hmm|TIGR02286 evalue:2.1e-40 score:136.6 best_domain_score:136.3 name:TIGR02286;
114208 113546 CDS
ID metaerg.pl|03715
allgo_ids GO:0045892; GO:0003677; GO:0046872; GO:0046677;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp002920635;
genomedb_acc GCF_002920635.1;
genomedb_target db:genomedb|GCF_002920635.1|WP_103843558.1 19 218 evalue:2.9e-59 qcov:90.90 identity:58.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 92.162; 0.576754; 90.7721; 0.321395; 0.491772;
pfam_acc PF02909; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_1; TetR_N;
pfam_target db:Pfam-A.hmm|PF02909.17 evalue:6.8e-21 score:73.8 best_domain_score:73.4 name:TetR_C_1; db:Pfam-A.hmm|PF00440.23 evalue:2.2e-09 score:36.2 best_domain_score:33.7 name:TetR_N;
sprot_desc Tetracycline repressor protein class C;
sprot_id sp|P03039|TETR3_ECOLX;
sprot_target db:uniprot_sprot|sp|P03039|TETR3_ECOLX 13 219 evalue:7.6e-14 qcov:94.10 identity:29.70;
>Feature NODE_20_length_113663_cov_40.4617
3 1760 CDS
ID metaerg.pl|03716
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
2438 8863 CDS
ID metaerg.pl|03717
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726820.1 7 1749 evalue:5.1e-302 qcov:81.40 identity:39.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF02225; PF00082;
pfam_desc PA domain; Subtilase family;
pfam_id PA; Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF02225.22 evalue:3e-10 score:39.2 best_domain_score:37.7 name:PA; db:Pfam-A.hmm|PF00082.22 evalue:1.2e-31 score:109.3 best_domain_score:109.3 name:Peptidase_S8;
sp YES;
tm_num 1;
2438 2521 signal_peptide
ID metaerg.pl|03718
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
2438 8863 transmembrane_helix
ID metaerg.pl|03719
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i2456-2524o;
11176 9119 CDS
ID metaerg.pl|03720
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726822.1 13 680 evalue:4.9e-230 qcov:97.50 identity:60.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
sp YES;
tm_num 1;
9119 9217 signal_peptide
ID metaerg.pl|03721
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
11176 9119 transmembrane_helix
ID metaerg.pl|03722
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology o11066-11125i;
13052 11166 CDS
ID metaerg.pl|03723
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169799.1 111 624 evalue:4.5e-198 qcov:81.80 identity:64.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF01839; PF07593; PF13517;
pfam_desc FG-GAP repeat; ASPIC and UnbV; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella;
pfam_id FG-GAP; UnbV_ASPIC; VCBS;
pfam_target db:Pfam-A.hmm|PF01839.23 evalue:5.3e-20 score:70.5 best_domain_score:19.9 name:FG-GAP; db:Pfam-A.hmm|PF07593.12 evalue:1.1e-14 score:53.4 best_domain_score:52.0 name:UnbV_ASPIC; db:Pfam-A.hmm|PF13517.6 evalue:2e-46 score:155.7 best_domain_score:58.3 name:VCBS;
13055 17086 CDS
ID metaerg.pl|03724
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__UBA2363;g__UBA2363;s__UBA2363 sp002344355;
genomedb_acc GCA_002344355.1;
genomedb_target db:genomedb|GCA_002344355.1|DDTN01000049.1_32 8 949 evalue:0.0e+00 qcov:70.10 identity:60.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00082;
pfam_desc Subtilase family;
pfam_id Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:1e-34 score:119.4 best_domain_score:118.8 name:Peptidase_S8;
sp YES;
13055 13111 signal_peptide
ID metaerg.pl|03725
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
17342 21244 CDS
ID metaerg.pl|03726
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Chloroflexia;o__Chloroflexales;f__Chloroflexaceae;g__Chloroploca;s__Chloroploca asiatica;
genomedb_acc GCF_002532075.1;
genomedb_target db:genomedb|GCF_002532075.1|WP_097654641.1 28 1291 evalue:1.3e-287 qcov:97.20 identity:46.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF17766; PF05922; PF02225; PF00082;
pfam_desc Fibronectin type-III domain; Peptidase inhibitor I9; PA domain; Subtilase family;
pfam_id fn3_6; Inhibitor_I9; PA; Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF17766.1 evalue:5.9e-09 score:35.3 best_domain_score:33.6 name:fn3_6; db:Pfam-A.hmm|PF05922.16 evalue:5e-05 score:23.1 best_domain_score:22.3 name:Inhibitor_I9; db:Pfam-A.hmm|PF02225.22 evalue:1e-07 score:31.1 best_domain_score:30.4 name:PA; db:Pfam-A.hmm|PF00082.22 evalue:1.2e-41 score:142.2 best_domain_score:140.7 name:Peptidase_S8;
sp YES;
17342 17425 signal_peptide
ID metaerg.pl|03727
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
21717 21316 CDS
ID metaerg.pl|03728
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37905.1 4 129 evalue:1.6e-31 qcov:94.70 identity:62.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
21912 23414 CDS
ID metaerg.pl|03729
allec_ids 3.4.21.-;
allgo_ids GO:0016021; GO:0008236;
allko_ids K07403;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37729.1 19 496 evalue:1.8e-157 qcov:95.60 identity:64.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF01957;
pfam_desc NfeD-like C-terminal, partner-binding;
pfam_id NfeD;
pfam_target db:Pfam-A.hmm|PF01957.18 evalue:6.7e-20 score:70.5 best_domain_score:69.3 name:NfeD;
sp YES;
sprot_desc Membrane-bound protease PH1510;
sprot_id sp|O59179|STOPP_PYRHO;
sprot_target db:uniprot_sprot|sp|O59179|STOPP_PYRHO 22 492 evalue:1.6e-48 qcov:94.20 identity:31.30;
tm_num 6;
21912 22025 signal_peptide
ID metaerg.pl|03730
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
21912 23414 transmembrane_helix
ID metaerg.pl|03731
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i21948-22016o22803-22871i22890-22958o22968-23027i23031-23090o23118-23186i;
23467 24243 CDS
ID metaerg.pl|03732
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37730.1 1 248 evalue:3.5e-104 qcov:96.10 identity:83.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF01145;
pfam_desc SPFH domain / Band 7 family;
pfam_id Band_7;
pfam_target db:Pfam-A.hmm|PF01145.25 evalue:4.4e-34 score:117.2 best_domain_score:116.9 name:Band_7;
sprot_desc hypothetical protein;
sprot_id sp|O28852|Y1420_ARCFU;
sprot_target db:uniprot_sprot|sp|O28852|Y1420_ARCFU 7 248 evalue:4.3e-69 qcov:93.80 identity:57.40;
tm_num 2;
23467 24243 transmembrane_helix
ID metaerg.pl|03733
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology o23479-23547i23566-23634o;
24240 24677 CDS
ID metaerg.pl|03734
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726818.1 8 141 evalue:1.1e-41 qcov:92.40 identity:63.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF16267;
pfam_desc Domain of unknown function (DUF4920);
pfam_id DUF4920;
pfam_target db:Pfam-A.hmm|PF16267.5 evalue:2.8e-10 score:39.3 best_domain_score:38.8 name:DUF4920;
sp YES;
24240 24293 signal_peptide
ID metaerg.pl|03735
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
25652 24813 CDS
ID metaerg.pl|03736
allec_ids 1.1.1.346;
allgo_ids GO:0005737; GO:0016491; GO:0019853;
allko_ids K06222;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726817.1 2 279 evalue:1.6e-123 qcov:99.60 identity:77.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00248;
pfam_desc Aldo/keto reductase family;
pfam_id Aldo_ket_red;
pfam_target db:Pfam-A.hmm|PF00248.21 evalue:3.5e-50 score:170.1 best_domain_score:134.1 name:Aldo_ket_red;
sprot_desc 2,5-diketo-D-gluconic acid reductase B;
sprot_id sp|Q8X7Z7|DKGB_ECO57;
sprot_target db:uniprot_sprot|sp|Q8X7Z7|DKGB_ECO57 14 278 evalue:4.7e-53 qcov:95.00 identity:39.80;
25709 26104 CDS
ID metaerg.pl|03737
allgo_ids GO:0004683; GO:0005516; GO:0006468;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces griseus_I;
genomedb_acc GCF_000720255.1;
genomedb_target db:genomedb|GCF_000720255.1|WP_037676888.1 6 125 evalue:3.2e-13 qcov:91.60 identity:33.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF08332; PF14534; PF13474;
pfam_desc Calcium/calmodulin dependent protein kinase II association domain; Domain of unknown function (DUF4440); SnoaL-like domain;
pfam_id CaMKII_AD; DUF4440; SnoaL_3;
pfam_target db:Pfam-A.hmm|PF08332.10 evalue:1e-09 score:37.8 best_domain_score:37.6 name:CaMKII_AD; db:Pfam-A.hmm|PF14534.6 evalue:3.5e-11 score:42.7 best_domain_score:42.5 name:DUF4440; db:Pfam-A.hmm|PF13474.6 evalue:6.5e-13 score:48.2 best_domain_score:48.0 name:SnoaL_3;
26745 26188 CDS
ID metaerg.pl|03738
allgo_ids GO:0005829; GO:0042802; GO:0008270; GO:0070207;
allko_ids K02536;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726816.1 4 179 evalue:1.9e-75 qcov:95.10 identity:79.50;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00132;
pfam_desc Bacterial transferase hexapeptide (six repeats);
pfam_id Hexapep;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:2.3e-16 score:58.1 best_domain_score:29.7 name:Hexapep;
sprot_desc hypothetical protein;
sprot_id sp|P0A9W9|YRDA_ECOLI;
sprot_target db:uniprot_sprot|sp|P0A9W9|YRDA_ECOLI 4 177 evalue:5.4e-37 qcov:94.10 identity:55.20;
27044 28801 CDS
ID metaerg.pl|03739
allec_ids 6.1.1.19;
allgo_ids GO:0000166; GO:0004814; GO:0005524; GO:0005737; GO:0006420;
allko_ids K01887;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726815.1 1 585 evalue:2.8e-282 qcov:100.00 identity:81.70;
kegg_pathway_id 00330; 00970;
kegg_pathway_name Arginine and proline metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03485; PF05746; PF00750; PF09334;
pfam_desc Arginyl tRNA synthetase N terminal domain; DALR anticodon binding domain; tRNA synthetases class I (R); tRNA synthetases class I (M);
pfam_id Arg_tRNA_synt_N; DALR_1; tRNA-synt_1d; tRNA-synt_1g;
pfam_target db:Pfam-A.hmm|PF03485.16 evalue:6.8e-24 score:83.5 best_domain_score:82.2 name:Arg_tRNA_synt_N; db:Pfam-A.hmm|PF05746.15 evalue:3.9e-38 score:129.5 best_domain_score:128.7 name:DALR_1; db:Pfam-A.hmm|PF00750.19 evalue:5.6e-23 score:80.7 best_domain_score:41.0 name:tRNA-synt_1d; db:Pfam-A.hmm|PF09334.11 evalue:0.00011 score:20.3 best_domain_score:10.3 name:tRNA-synt_1g;
sprot_desc Arginine--tRNA ligase;
sprot_id sp|A1WZR7|SYR_HALHL;
sprot_target db:uniprot_sprot|sp|A1WZR7|SYR_HALHL 1 585 evalue:3.2e-192 qcov:100.00 identity:58.90;
tigrfam_acc TIGR00456;
tigrfam_desc arginine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name argS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00456 evalue:1e-129 score:432.7 best_domain_score:428.3 name:TIGR00456;
28801 29337 CDS
ID metaerg.pl|03740
allgo_ids GO:0042834;
allko_ids K01448;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726814.1 1 177 evalue:5.8e-66 qcov:99.40 identity:73.90;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF05036;
pfam_desc Sporulation related domain;
pfam_id SPOR;
pfam_target db:Pfam-A.hmm|PF05036.13 evalue:7.6e-21 score:73.5 best_domain_score:73.1 name:SPOR;
sp YES;
tm_num 1;
28801 28902 signal_peptide
ID metaerg.pl|03741
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
28801 29337 transmembrane_helix
ID metaerg.pl|03742
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i28837-28905o;
29363 30520 CDS
ID metaerg.pl|03743
allgo_ids GO:0006629;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726813.1 1 374 evalue:7.9e-161 qcov:97.10 identity:73.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF01734;
pfam_desc Patatin-like phospholipase;
pfam_id Patatin;
pfam_target db:Pfam-A.hmm|PF01734.22 evalue:2.7e-24 score:85.7 best_domain_score:85.3 name:Patatin;
31968 30658 CDS
ID metaerg.pl|03744
allgo_ids GO:0005576; GO:0016020; GO:0003824; GO:0005044;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726812.1 1 435 evalue:3.4e-152 qcov:99.80 identity:61.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF07995;
pfam_desc Glucose / Sorbosone dehydrogenase;
pfam_id GSDH;
pfam_target db:Pfam-A.hmm|PF07995.11 evalue:1.1e-38 score:132.6 best_domain_score:124.8 name:GSDH;
sp YES;
sprot_desc HHIP-like protein 1;
sprot_id sp|Q96JK4|HIPL1_HUMAN;
sprot_target db:uniprot_sprot|sp|Q96JK4|HIPL1_HUMAN 40 408 evalue:1.7e-49 qcov:84.60 identity:37.50;
30658 30717 signal_peptide
ID metaerg.pl|03745
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
32105 33493 CDS
ID metaerg.pl|03746
allgo_ids GO:0006814; GO:0015655; GO:0016020; GO:0032328; GO:0016021; GO:0005886;
allko_ids K03310;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726811.1 1 458 evalue:7.4e-214 qcov:99.10 identity:83.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF01235;
pfam_desc Sodium:alanine symporter family;
pfam_id Na_Ala_symp;
pfam_target db:Pfam-A.hmm|PF01235.17 evalue:9.2e-137 score:455.7 best_domain_score:455.4 name:Na_Ala_symp;
sprot_desc Sodium/alanine symporter AgcS;
sprot_id sp|Q6LX42|AGCS_METMP;
sprot_target db:uniprot_sprot|sp|Q6LX42|AGCS_METMP 12 456 evalue:1.1e-99 qcov:96.30 identity:49.30;
tigrfam_acc TIGR00835;
tigrfam_desc amino acid carrier protein;
tigrfam_name agcS;
tigrfam_target db:TIGRFAMs.hmm|TIGR00835 evalue:1.5e-139 score:464.6 best_domain_score:464.5 name:TIGR00835;
tm_num 10;
32105 33493 transmembrane_helix
ID metaerg.pl|03747
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i32138-32206o32363-32431i32558-32626o32669-32737i32774-32842o32870-32929i33017-33085o33185-33253i33290-33358o33386-33439i;
33712 34269 CDS
ID metaerg.pl|03748
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
sp YES;
tm_num 2;
33712 33792 signal_peptide
ID metaerg.pl|03749
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
33712 34269 transmembrane_helix
ID metaerg.pl|03750
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i33730-33789o34174-34242i;
34490 34966 CDS
ID metaerg.pl|03751
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
sp YES;
34490 34567 signal_peptide
ID metaerg.pl|03752
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
35641 35120 CDS
ID metaerg.pl|03753
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
sp YES;
tm_num 1;
35120 35179 signal_peptide
ID metaerg.pl|03754
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
35641 35120 transmembrane_helix
ID metaerg.pl|03755
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology o35546-35614i;
38560 35906 CDS
ID metaerg.pl|03756
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__UBA2363;g__UBA2363;s__UBA2363 sp002344355;
genomedb_acc GCA_002344355.1;
genomedb_target db:genomedb|GCA_002344355.1|DDTN01000018.1_2 1 714 evalue:5.4e-213 qcov:80.80 identity:54.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF01483;
pfam_desc Proprotein convertase P-domain;
pfam_id P_proprotein;
pfam_target db:Pfam-A.hmm|PF01483.20 evalue:3.2e-08 score:32.7 best_domain_score:29.5 name:P_proprotein;
sp YES;
35906 35962 signal_peptide
ID metaerg.pl|03757
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
39642 38785 CDS
ID metaerg.pl|03758
allec_ids 1.1.-.-;
allgo_ids GO:0051287; GO:0050661; GO:0016491;
allko_ids K00020; K00042;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726807.1 4 283 evalue:7.0e-114 qcov:98.20 identity:74.30;
kegg_pathway_id 00280; 00630;
kegg_pathway_name Valine, leucine and isoleucine degradation; Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
metacyc_pathway_id GAMMAHEXCHLORDEG-PWY;
metacyc_pathway_name γ-hexachlorocyclohexane degradation;;
metacyc_pathway_type CHLORINATED-COMPOUNDS-DEG;;
pfam_acc PF03807; PF14833; PF03446;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id F420_oxidored; NAD_binding_11; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:0.00012 score:21.8 best_domain_score:20.5 name:F420_oxidored; db:Pfam-A.hmm|PF14833.6 evalue:1.1e-28 score:99.1 best_domain_score:98.4 name:NAD_binding_11; db:Pfam-A.hmm|PF03446.15 evalue:1.7e-42 score:144.5 best_domain_score:141.7 name:NAD_binding_2;
sp YES;
sprot_desc Uncharacterized oxidoreductase Sfri_1503;
sprot_id sp|O33730|Y1503_SHEFN;
sprot_target db:uniprot_sprot|sp|O33730|Y1503_SHEFN 2 280 evalue:2.9e-42 qcov:97.90 identity:36.50;
38785 38847 signal_peptide
ID metaerg.pl|03759
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
41537 39639 CDS
ID metaerg.pl|03760
allec_ids 4.1.1.19;
allgo_ids GO:0003824; GO:0008792; GO:0046872; GO:0006527; GO:0033388; GO:0008295;
allko_ids K01585; K01583; K01586;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727119.1 6 627 evalue:1.7e-282 qcov:98.40 identity:77.80;
kegg_pathway_id 00251; 00220; 00300;
kegg_pathway_name Glutamate metabolism; Urea cycle and metabolism of amino groups; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
metacyc_pathway_id PWY-43; PWY-40; PWY-6305; POLYAMINSYN3-PWY; ARG+POLYAMINE-SYN; PWY0-823; ARGDEG-III-PWY; POLYAMSYN-PWY; PWY0-1299;
metacyc_pathway_name putrescine biosynthesis II;; putrescine biosynthesis I;; putrescine biosynthesis IV;; superpathway of polyamine biosynthesis II;; superpathway of arginine and polyamine biosynthesis;; L-arginine degradation III (arginine decarboxylase/agmatinase pathway);; L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway);; superpathway of polyamine biosynthesis I;; arginine dependent acid resistance;;
metacyc_pathway_type Putrescine-Biosynthesis;; Putrescine-Biosynthesis;; Putrescine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-DEG;; ARGININE-DEG;; Polyamine-Biosynthesis; Super-Pathways;; Acid-Resistance;;
pfam_acc PF17944; PF17810; PF02784;
pfam_desc Arginine decarboxylase C-terminal helical extension; Arginine decarboxylase helical bundle domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain;
pfam_id Arg_decarbox_C; Arg_decarb_HB; Orn_Arg_deC_N;
pfam_target db:Pfam-A.hmm|PF17944.1 evalue:3.4e-11 score:42.8 best_domain_score:42.8 name:Arg_decarbox_C; db:Pfam-A.hmm|PF17810.1 evalue:1.1e-17 score:63.3 best_domain_score:62.1 name:Arg_decarb_HB; db:Pfam-A.hmm|PF02784.16 evalue:8.7e-44 score:149.0 best_domain_score:148.6 name:Orn_Arg_deC_N;
sprot_desc Biosynthetic arginine decarboxylase;
sprot_id sp|Q8P448|SPEA_XANCP;
sprot_target db:uniprot_sprot|sp|Q8P448|SPEA_XANCP 6 625 evalue:3.5e-181 qcov:98.10 identity:51.40;
tigrfam_acc TIGR01273;
tigrfam_desc arginine decarboxylase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name speA;
tigrfam_sub1role Polyamine biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01273 evalue:8.7e-221 score:733.8 best_domain_score:733.5 name:TIGR01273;
41638 42474 CDS
ID metaerg.pl|03761
allec_ids 2.5.1.16;
allgo_ids GO:0005737; GO:0004766; GO:0008295;
allko_ids K00797;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726806.1 1 277 evalue:3.0e-138 qcov:99.60 identity:84.10;
kegg_pathway_id 00410; 00220; 00480; 00271;
kegg_pathway_name beta-Alanine metabolism; Urea cycle and metabolism of amino groups; Glutathione metabolism; Methionine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
metacyc_pathway_id POLYAMINSYN3-PWY; BSUBPOLYAMSYN-PWY; ARG+POLYAMINE-SYN; POLYAMSYN-PWY;
metacyc_pathway_name superpathway of polyamine biosynthesis II;; spermidine biosynthesis I;; superpathway of arginine and polyamine biosynthesis;; superpathway of polyamine biosynthesis I;;
metacyc_pathway_type Polyamine-Biosynthesis; Super-Pathways;; Spermidine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;;
pfam_acc PF01564; PF17284;
pfam_desc Spermine/spermidine synthase domain; Spermidine synthase tetramerisation domain;
pfam_id Spermine_synth; Spermine_synt_N;
pfam_target db:Pfam-A.hmm|PF01564.17 evalue:9.9e-48 score:161.3 best_domain_score:160.9 name:Spermine_synth; db:Pfam-A.hmm|PF17284.2 evalue:2.3e-11 score:42.7 best_domain_score:41.8 name:Spermine_synt_N;
sprot_desc Polyamine aminopropyltransferase;
sprot_id sp|Q606H1|SPEE_METCA;
sprot_target db:uniprot_sprot|sp|Q606H1|SPEE_METCA 8 274 evalue:2.8e-90 qcov:96.00 identity:60.70;
tigrfam_acc TIGR00417;
tigrfam_desc spermidine synthase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name speE;
tigrfam_sub1role Polyamine biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00417 evalue:9.2e-77 score:257.1 best_domain_score:256.9 name:TIGR00417;
42971 42546 CDS
ID metaerg.pl|03762
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726801.1 1 141 evalue:1.9e-43 qcov:100.00 identity:59.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF12276;
pfam_desc Protein of unknown function (DUF3617);
pfam_id DUF3617;
pfam_target db:Pfam-A.hmm|PF12276.8 evalue:3e-14 score:52.7 best_domain_score:51.1 name:DUF3617;
sp YES;
42546 42605 signal_peptide
ID metaerg.pl|03763
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
43206 45428 CDS
ID metaerg.pl|03764
allgo_ids GO:0009279; GO:0016021;
allko_ids K02014;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__Methylophaga;s__Methylophaga sp002363955;
genomedb_acc GCA_002363955.1;
genomedb_target db:genomedb|GCA_002363955.1|DEXE01000007.1_259 4 740 evalue:2.6e-237 qcov:99.60 identity:55.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF07715; PF00593;
pfam_desc TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:3.9e-22 score:78.1 best_domain_score:77.5 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:1.3e-30 score:106.9 best_domain_score:102.8 name:TonB_dep_Rec;
sp YES;
sprot_desc Probable TonB-dependent receptor NMB0964;
sprot_id sp|Q9JZN9|Y964_NEIMB;
sprot_target db:uniprot_sprot|sp|Q9JZN9|Y964_NEIMB 5 738 evalue:8.9e-59 qcov:99.20 identity:25.70;
43206 43280 signal_peptide
ID metaerg.pl|03765
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
45959 45540 CDS
ID metaerg.pl|03766
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
tm_num 2;
45959 45540 transmembrane_helix
ID metaerg.pl|03767
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i45666-45734o45762-45830i;
48598 46121 CDS
ID metaerg.pl|03768
allec_ids 3.6.4.13; 3.6.4.-;
allgo_ids GO:0003676; GO:0005524; GO:0008026;
allko_ids K12814; K12813; K12818; K13117; K12820; K12815; K03578; K13184; K01509; K13185; K14442; K03579;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Marinobacter;s__Marinobacter persicus;
genomedb_acc GCF_900114155.1;
genomedb_target db:genomedb|GCF_900114155.1|WP_091704740.1 3 815 evalue:8.6e-290 qcov:98.50 identity:63.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00270; PF07652; PF04408; PF00271; PF08482;
pfam_desc DEAD/DEAH box helicase; Flavivirus DEAD domain ; Helicase associated domain (HA2); Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal;
pfam_id DEAD; Flavi_DEAD; HA2; Helicase_C; HrpB_C;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:1.8e-07 score:30.3 best_domain_score:29.5 name:DEAD; db:Pfam-A.hmm|PF07652.14 evalue:2.4e-05 score:23.6 best_domain_score:22.4 name:Flavi_DEAD; db:Pfam-A.hmm|PF04408.23 evalue:1.5e-08 score:34.1 best_domain_score:33.0 name:HA2; db:Pfam-A.hmm|PF00271.31 evalue:7.6e-14 score:51.2 best_domain_score:50.3 name:Helicase_C; db:Pfam-A.hmm|PF08482.10 evalue:1.7e-51 score:173.4 best_domain_score:172.4 name:HrpB_C;
sprot_desc ATP-dependent RNA helicase HrpB;
sprot_id sp|P37024|HRPB_ECOLI;
sprot_target db:uniprot_sprot|sp|P37024|HRPB_ECOLI 2 805 evalue:4.2e-174 qcov:97.50 identity:44.30;
tigrfam_acc TIGR01970;
tigrfam_desc ATP-dependent helicase HrpB;
tigrfam_mainrole Unknown function;
tigrfam_name DEAH_box_HrpB;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01970 evalue:0 score:1025.7 best_domain_score:1025.5 name:TIGR01970;
50353 48602 CDS
ID metaerg.pl|03769
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF07695; PF00990;
pfam_desc 7TM diverse intracellular signalling; Diguanylate cyclase, GGDEF domain;
pfam_id 7TMR-DISM_7TM; GGDEF;
pfam_target db:Pfam-A.hmm|PF07695.11 evalue:5.7e-17 score:61.5 best_domain_score:61.5 name:7TMR-DISM_7TM; db:Pfam-A.hmm|PF00990.21 evalue:5e-46 score:155.6 best_domain_score:155.0 name:GGDEF;
sp YES;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:4.4e-52 score:175.3 best_domain_score:174.7 name:TIGR00254;
tm_num 8;
48602 48727 signal_peptide
ID metaerg.pl|03770
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
50353 48602 transmembrane_helix
ID metaerg.pl|03771
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i48659-48727o49157-49216i49250-49318o49346-49414i49451-49510o49523-49576i49613-49681o49709-49768i;
50898 50338 CDS
ID metaerg.pl|03772
allgo_ids GO:0016209; GO:0016491; GO:0055114;
allko_ids K11065; K03386;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726778.1 1 184 evalue:1.3e-71 qcov:98.90 identity:68.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:1e-18 score:66.7 best_domain_score:66.3 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:2.5e-14 score:52.4 best_domain_score:52.2 name:Redoxin;
51751 50885 CDS
ID metaerg.pl|03773
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfurivibrionaceae;g__Desulfurivibrio;s__Desulfurivibrio alkaliphilus;
genomedb_acc GCF_000092205.1;
genomedb_target db:genomedb|GCF_000092205.1|WP_049824457.1 14 279 evalue:1.1e-111 qcov:92.40 identity:80.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00924;
pfam_desc Mechanosensitive ion channel;
pfam_id MS_channel;
pfam_target db:Pfam-A.hmm|PF00924.18 evalue:3.9e-45 score:153.2 best_domain_score:152.7 name:MS_channel;
sprot_desc Uncharacterized MscS family protein AF_1546;
sprot_id sp|O28726|Y1546_ARCFU;
sprot_target db:uniprot_sprot|sp|O28726|Y1546_ARCFU 20 261 evalue:3.3e-33 qcov:84.00 identity:29.80;
tm_num 3;
51751 50885 transmembrane_helix
ID metaerg.pl|03774
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology o50927-50986i51041-51094o51104-51172i;
52559 51756 CDS
ID metaerg.pl|03775
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfurivibrionaceae;g__Desulfurivibrio;s__Desulfurivibrio alkaliphilus;
genomedb_acc GCF_000092205.1;
genomedb_target db:genomedb|GCF_000092205.1|WP_013164792.1 12 266 evalue:6.0e-99 qcov:95.50 identity:71.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
53475 52564 CDS
ID metaerg.pl|03776
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726777.1 1 297 evalue:1.1e-125 qcov:98.00 identity:78.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:2.5e-14 score:52.2 best_domain_score:50.6 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:1.6e-26 score:92.2 best_domain_score:91.6 name:LysR_substrate;
53636 54238 CDS
ID metaerg.pl|03777
allec_ids 1.7.1.17;
allgo_ids GO:0016491; GO:0009055; GO:0010181; GO:0016652; GO:0016661;
allko_ids K01118;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726776.1 1 200 evalue:3.1e-68 qcov:100.00 identity:66.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF02525; PF03358;
pfam_desc Flavodoxin-like fold; NADPH-dependent FMN reductase;
pfam_id Flavodoxin_2; FMN_red;
pfam_target db:Pfam-A.hmm|PF02525.17 evalue:4.5e-42 score:143.2 best_domain_score:143.1 name:Flavodoxin_2; db:Pfam-A.hmm|PF03358.15 evalue:4.6e-10 score:38.7 best_domain_score:38.4 name:FMN_red;
sprot_desc FMN-dependent NADH-azoreductase;
sprot_id sp|B3PKG0|AZOR_CELJU;
sprot_target db:uniprot_sprot|sp|B3PKG0|AZOR_CELJU 1 190 evalue:3.5e-50 qcov:95.00 identity:50.00;
54280 55143 CDS
ID metaerg.pl|03778
allec_ids 1.13.11.24;
allgo_ids GO:0046872; GO:0008127;
allko_ids K06911;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726775.1 2 287 evalue:4.4e-124 qcov:99.70 identity:74.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF02678; PF05726;
pfam_desc Pirin; Pirin C-terminal cupin domain;
pfam_id Pirin; Pirin_C;
pfam_target db:Pfam-A.hmm|PF02678.16 evalue:4.6e-37 score:125.5 best_domain_score:124.6 name:Pirin; db:Pfam-A.hmm|PF05726.13 evalue:4.4e-31 score:106.6 best_domain_score:103.9 name:Pirin_C;
sprot_desc Putative quercetin 2,3-dioxygenase PA3240;
sprot_id sp|Q9HZ00|Y3240_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HZ00|Y3240_PSEAE 16 283 evalue:1.9e-81 qcov:93.40 identity:57.10;
55428 55213 CDS
ID metaerg.pl|03779
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio;s__Thioalkalivibrio thiocyanoxidans;
genomedb_acc GCF_000385215.1;
genomedb_target db:genomedb|GCF_000385215.1|WP_018865435.1 4 66 evalue:7.1e-07 qcov:88.70 identity:49.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
sp YES;
tm_num 1;
55213 55296 lipoprotein_signal_peptide
ID metaerg.pl|03780
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
55428 55213 transmembrane_helix
ID metaerg.pl|03781
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i55246-55299o;
55625 55425 CDS
ID metaerg.pl|03782
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Spongiibacteraceae;g__Zhongshania;s__Zhongshania sp002915595;
genomedb_acc GCF_002915595.1;
genomedb_target db:genomedb|GCF_002915595.1|WP_103684305.1 1 62 evalue:1.4e-17 qcov:93.90 identity:71.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF05532;
pfam_desc CsbD-like;
pfam_id CsbD;
pfam_target db:Pfam-A.hmm|PF05532.12 evalue:2.9e-15 score:55.1 best_domain_score:55.0 name:CsbD;
56693 55773 CDS
ID metaerg.pl|03783
allgo_ids GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio;s__Thioalkalivibrio sp000378305;
genomedb_acc GCF_000378305.1;
genomedb_target db:genomedb|GCF_000378305.1|WP_018138483.1 17 248 evalue:1.8e-67 qcov:75.80 identity:54.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00027; PF00325; PF13545;
pfam_desc Cyclic nucleotide-binding domain; Bacterial regulatory proteins, crp family; Crp-like helix-turn-helix domain;
pfam_id cNMP_binding; Crp; HTH_Crp_2;
pfam_target db:Pfam-A.hmm|PF00027.29 evalue:1.9e-13 score:49.5 best_domain_score:48.8 name:cNMP_binding; db:Pfam-A.hmm|PF00325.20 evalue:1.1e-07 score:30.7 best_domain_score:29.8 name:Crp; db:Pfam-A.hmm|PF13545.6 evalue:1.2e-16 score:59.7 best_domain_score:59.0 name:HTH_Crp_2;
57258 56683 CDS
ID metaerg.pl|03784
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726772.1 1 175 evalue:5.8e-56 qcov:91.60 identity:56.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF07566;
pfam_desc Domain of Unknown Function (DUF1543);
pfam_id DUF1543;
pfam_target db:Pfam-A.hmm|PF07566.12 evalue:6.7e-30 score:101.8 best_domain_score:66.9 name:DUF1543;
58666 57392 CDS
ID metaerg.pl|03785
allec_ids 3.1.4.-;
allgo_ids GO:0071111; GO:0046872; GO:2000147; GO:1900231;
allko_ids K01120;
casgene_acc cd09641_cas3HD_CAS-I;
casgene_name cas3HD;
casgene_target db:casgenes.hmm|cd09641_cas3HD_CAS-I evalue:1.8e-09 score:36.9 best_domain_score:35.2 name:cas3HD;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169536.1 13 418 evalue:1.0e-116 qcov:95.80 identity:51.30;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF11871; PF01966; PF08668; PF13487;
pfam_desc Domain of unknown function (DUF3391); HD domain; HDOD domain; HD domain;
pfam_id DUF3391; HD; HDOD; HD_5;
pfam_target db:Pfam-A.hmm|PF11871.8 evalue:3.2e-10 score:39.9 best_domain_score:39.2 name:DUF3391; db:Pfam-A.hmm|PF01966.22 evalue:5e-20 score:71.2 best_domain_score:70.0 name:HD; db:Pfam-A.hmm|PF08668.12 evalue:2.7e-05 score:23.0 best_domain_score:22.4 name:HDOD; db:Pfam-A.hmm|PF13487.6 evalue:2.1e-18 score:65.6 best_domain_score:64.4 name:HD_5;
sprot_desc Cyclic di-GMP phosphodiesterase PA4108;
sprot_id sp|Q9HWS0|CDPD1_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HWS0|CDPD1_PSEAE 20 379 evalue:7.7e-39 qcov:84.90 identity:34.20;
tigrfam_acc TIGR00277;
tigrfam_desc HDIG domain;
tigrfam_name HDIG;
tigrfam_target db:TIGRFAMs.hmm|TIGR00277 evalue:3.2e-10 score:38.9 best_domain_score:37.3 name:TIGR00277;
60290 58836 CDS
ID metaerg.pl|03786
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0005298; GO:0031402; GO:0015824;
allko_ids K11928;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724196.1 1 484 evalue:4.9e-200 qcov:100.00 identity:75.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00474;
pfam_desc Sodium:solute symporter family;
pfam_id SSF;
pfam_target db:Pfam-A.hmm|PF00474.17 evalue:2.4e-100 score:335.5 best_domain_score:335.0 name:SSF;
sprot_desc Sodium/proline symporter;
sprot_id sp|P10502|PUTP_SALTY;
sprot_target db:uniprot_sprot|sp|P10502|PUTP_SALTY 2 481 evalue:2.1e-125 qcov:99.20 identity:51.10;
tigrfam_acc TIGR00813; TIGR02121;
tigrfam_desc transporter, solute:sodium symporter (SSS) family; sodium/proline symporter;
tigrfam_mainrole Transport and binding proteins; Transport and binding proteins;
tigrfam_name sss; Na_Pro_sym;
tigrfam_sub1role Cations and iron carrying compounds; Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00813 evalue:1.2e-90 score:303.6 best_domain_score:303.2 name:TIGR00813; db:TIGRFAMs.hmm|TIGR02121 evalue:7.4e-187 score:621.0 best_domain_score:620.7 name:TIGR02121;
tm_num 12;
60290 58836 transmembrane_helix
ID metaerg.pl|03787
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i58848-58904o59022-59090i59199-59267o59310-59378i59397-59465o59523-59591i59652-59720o59778-59846i59934-59993o60021-60089i60102-60161o60189-60242i;
60830 60420 CDS
ID metaerg.pl|03788
allko_ids K00031; K11527; K01697; K00974; K05847; K00088;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Par-f-2;s__Par-f-2 sp002863805;
genomedb_acc GCF_002863805.1;
genomedb_target db:genomedb|GCF_002863805.1|WP_102043097.1 10 135 evalue:1.0e-38 qcov:92.60 identity:61.10;
kegg_pathway_id 00480; 00271; 00720; 00983; 00260; 00230; 00020; 00450; 02010;
kegg_pathway_name Glutathione metabolism; Methionine metabolism; Reductive carboxylate cycle (CO2 fixation); Drug metabolism - other enzymes; Glycine, serine and threonine metabolism; Purine metabolism; Citrate cycle (TCA cycle); Selenoamino acid metabolism; ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00571;
pfam_desc CBS domain;
pfam_id CBS;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:2.1e-18 score:65.7 best_domain_score:36.3 name:CBS;
61194 60847 CDS
ID metaerg.pl|03789
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__UBA2357;s__UBA2357 sp002872475;
genomedb_acc GCF_002872475.1;
genomedb_target db:genomedb|GCF_002872475.1|WP_102245611.1 1 115 evalue:4.8e-37 qcov:100.00 identity:68.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
62711 61191 CDS
ID metaerg.pl|03790
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Ectothiorhodospira;s__Ectothiorhodospira sp000225005;
genomedb_acc GCF_000225005.1;
genomedb_target db:genomedb|GCF_000225005.1|WP_008933009.1 1 493 evalue:8.7e-184 qcov:97.40 identity:72.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF07556;
pfam_desc Protein of unknown function (DUF1538);
pfam_id DUF1538;
pfam_target db:Pfam-A.hmm|PF07556.11 evalue:1.9e-136 score:451.3 best_domain_score:229.3 name:DUF1538;
tm_num 14;
62711 61191 transmembrane_helix
ID metaerg.pl|03791
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i61224-61292o61305-61373i61440-61508o61551-61610i61614-61682o61725-61793i61827-61895o61998-62066i62100-62168o62211-62279i62340-62399o62409-62477i62496-62564o62607-62675i;
64772 62976 CDS
ID metaerg.pl|03792
allec_ids 1.3.8.-;
allgo_ids GO:0016627; GO:0055114; GO:0050660; GO:0052890;
allko_ids K14448; K00248; K00253; K06446; K11731; K00249; K20035;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726759.1 1 598 evalue:1.6e-285 qcov:100.00 identity:79.30;
kegg_pathway_id 00280; 00640; 00650; 00410; 00930; 00071;
kegg_pathway_name Valine, leucine and isoleucine degradation; Propanoate metabolism; Butanoate metabolism; beta-Alanine metabolism; Caprolactam degradation; Fatty acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00441; PF08028; PF12806; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acetyl-CoA dehydrogenase C-terminal like; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_C; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:5.6e-20 score:71.3 best_domain_score:71.3 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:5.5e-08 score:32.4 best_domain_score:30.5 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF12806.7 evalue:6.3e-34 score:116.0 best_domain_score:116.0 name:Acyl-CoA_dh_C; db:Pfam-A.hmm|PF02770.19 evalue:1.4e-18 score:66.1 best_domain_score:64.1 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:4.1e-14 score:52.5 best_domain_score:51.0 name:Acyl-CoA_dh_N;
sprot_desc 3-methylmercaptopropionyl-CoA dehydrogenase;
sprot_id sp|Q5LLW7|DMDC_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LLW7|DMDC_RUEPO 4 583 evalue:9.0e-126 qcov:97.00 identity:41.50;
65948 64929 CDS
ID metaerg.pl|03793
allec_ids 3.5.4.2; 3.5.4.4;
allgo_ids GO:0019239; GO:0000034; GO:0008270; GO:0006146; GO:0043103; GO:0009117;
allko_ids K01488; K21053;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727113.1 1 333 evalue:2.2e-162 qcov:98.20 identity:84.10;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
metacyc_pathway_id PWY0-1296; SALVADEHYPOX-PWY; PWY-6353; P121-PWY;
metacyc_pathway_name purine ribonucleosides degradation;; adenosine nucleotides degradation II;; purine nucleotides degradation II (aerobic);; adenine and adenosine salvage I;;
metacyc_pathway_type Purine-Degradation;; Adenosine-Nucleotides-Degradation;; Purine-Degradation; Super-Pathways;; Adenine-Adenosine-Salvage;;
pfam_acc PF00962;
pfam_desc Adenosine/AMP deaminase;
pfam_id A_deaminase;
pfam_target db:Pfam-A.hmm|PF00962.22 evalue:1.5e-75 score:253.8 best_domain_score:253.6 name:A_deaminase;
sprot_desc Adenine deaminase;
sprot_id sp|Q2SLW3|ADE_HAHCH;
sprot_target db:uniprot_sprot|sp|Q2SLW3|ADE_HAHCH 1 330 evalue:2.9e-121 qcov:97.30 identity:63.30;
tigrfam_acc TIGR01430;
tigrfam_desc adenosine deaminase;
tigrfam_name aden_deam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01430 evalue:8e-120 score:398.9 best_domain_score:398.7 name:TIGR01430;
67801 66071 CDS
ID metaerg.pl|03794
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38989.1 11 569 evalue:6.5e-50 qcov:97.00 identity:33.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
sp YES;
tm_num 2;
66071 66157 signal_peptide
ID metaerg.pl|03795
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
67801 66071 transmembrane_helix
ID metaerg.pl|03796
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i66107-66175o67691-67759i;
68056 77793 CDS
ID metaerg.pl|03797
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF02368; PF17963; PF17803; PF01839; PF05345; PF03793; PF05593; PF13517;
pfam_desc Bacterial Ig-like domain (group 2); Bacterial Ig domain; Bacterial cadherin-like domain; FG-GAP repeat; Putative Ig domain; PASTA domain; RHS Repeat; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella;
pfam_id Big_2; Big_9; Cadherin_4; FG-GAP; He_PIG; PASTA; RHS_repeat; VCBS;
pfam_target db:Pfam-A.hmm|PF02368.18 evalue:3.5e-07 score:29.3 best_domain_score:27.3 name:Big_2; db:Pfam-A.hmm|PF17963.1 evalue:1.5e-21 score:76.2 best_domain_score:39.1 name:Big_9; db:Pfam-A.hmm|PF17803.1 evalue:1.1e-12 score:47.7 best_domain_score:47.7 name:Cadherin_4; db:Pfam-A.hmm|PF01839.23 evalue:3.2e-13 score:48.8 best_domain_score:13.3 name:FG-GAP; db:Pfam-A.hmm|PF05345.12 evalue:8.2e-16 score:57.2 best_domain_score:21.6 name:He_PIG; db:Pfam-A.hmm|PF03793.19 evalue:8.1e-10 score:37.7 best_domain_score:35.8 name:PASTA; db:Pfam-A.hmm|PF05593.14 evalue:1.2e-97 score:318.7 best_domain_score:36.5 name:RHS_repeat; db:Pfam-A.hmm|PF13517.6 evalue:2.2e-27 score:94.6 best_domain_score:20.7 name:VCBS;
sp YES;
tigrfam_acc TIGR01643; TIGR03696;
tigrfam_desc YD repeat (two copies); RHS repeat-associated core domain;
tigrfam_name YD_repeat_2x; Rhs_assc_core;
tigrfam_target db:TIGRFAMs.hmm|TIGR01643 evalue:7.7e-96 score:310.3 best_domain_score:33.8 name:TIGR01643; db:TIGRFAMs.hmm|TIGR03696 evalue:1.3e-12 score:47.2 best_domain_score:45.9 name:TIGR03696;
68056 68106 signal_peptide
ID metaerg.pl|03798
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
80185 77825 CDS
ID metaerg.pl|03799
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K11228; K11912; K08790; K08854; K08897; K11889; K08848; K05744; K08846; K04444; K05105; K08855; K05103; K05102; K08333; K08282; K08856; K07673; K11265; K13302; K00924; K04424; K07682; K05743; K03407; K05111; K11623; K04442; K07683; K07778; K08884; K05113; K08810; K04372; K04443; K08847; K01728; K04367; K08841; K07675; K13414; K02486; K12767; K08853; K04688; K05688; K13304; K05121; K13303; K04420; K04421; K08286; K01768; K05112; K08809; K04373; K08792; K05098; K05096; K05097; K05091; K02482; K02480; K04445;
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales;f__UBA10450;g__AV80;s__AV80 sp003134765;
genomedb_acc GCA_003134765.1;
genomedb_target db:genomedb|GCA_003134765.1|PLCM01000035.1_125 3 766 evalue:6.4e-117 qcov:97.20 identity:37.20;
kegg_pathway_id 04010; 04011; 02020; 00040; 04150; 05012; 04640; 04140; 04530; 04360; 04510; 00230;
kegg_pathway_name MAPK signaling pathway; MAPK signaling pathway - yeast; Two-component system - General; Pentose and glucuronate interconversions; mTOR signaling pathway; Parkinson's disease; Hematopoietic cell lineage; Regulation of autophagy; Tight junction; Axon guidance; Focal adhesion; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF01636; PF06293; PF00069; PF07714; PF00515; PF13374; PF13424; PF07719; PF07721; PF13181;
pfam_desc Phosphotransferase enzyme family; Lipopolysaccharide kinase (Kdo/WaaP) family; Protein kinase domain; Protein tyrosine kinase; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id APH; Kdo; Pkinase; Pkinase_Tyr; TPR_1; TPR_10; TPR_12; TPR_2; TPR_4; TPR_8;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:1.4e-09 score:37.4 best_domain_score:26.7 name:APH; db:Pfam-A.hmm|PF06293.14 evalue:4.5e-05 score:22.1 best_domain_score:20.8 name:Kdo; db:Pfam-A.hmm|PF00069.25 evalue:1e-38 score:132.5 best_domain_score:131.9 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:1.6e-30 score:105.5 best_domain_score:104.9 name:Pkinase_Tyr; db:Pfam-A.hmm|PF00515.28 evalue:3.6e-08 score:32.1 best_domain_score:18.9 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:1.8e-23 score:80.9 best_domain_score:32.4 name:TPR_10; db:Pfam-A.hmm|PF13424.6 evalue:2.5e-43 score:145.5 best_domain_score:44.7 name:TPR_12; db:Pfam-A.hmm|PF07719.17 evalue:1e-07 score:30.7 best_domain_score:11.0 name:TPR_2; db:Pfam-A.hmm|PF07721.14 evalue:6.4e-07 score:28.7 best_domain_score:19.3 name:TPR_4; db:Pfam-A.hmm|PF13181.6 evalue:9.7e-11 score:40.3 best_domain_score:13.4 name:TPR_8;
tm_num 1;
80185 77825 transmembrane_helix
ID metaerg.pl|03800
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i79001-79069o;
80768 80190 CDS
ID metaerg.pl|03801
allgo_ids GO:0003700; GO:0006352; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Congregibacter;s__Congregibacter sp002428935;
genomedb_acc GCA_002428935.1;
genomedb_target db:genomedb|GCA_002428935.1|DIYG01000087.1_23 1 184 evalue:2.0e-40 qcov:95.80 identity:47.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF07638; PF04545; PF08281;
pfam_desc ECF sigma factor; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_ECF; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF07638.11 evalue:8.2e-48 score:162.0 best_domain_score:161.8 name:Sigma70_ECF; db:Pfam-A.hmm|PF04545.16 evalue:1.3e-10 score:39.8 best_domain_score:38.8 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:1.6e-12 score:46.1 best_domain_score:45.2 name:Sigma70_r4_2;
tigrfam_acc TIGR02937; TIGR02999;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor, TIGR02999 family;
tigrfam_name sigma70-ECF; Sig-70_X6;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:4.1e-21 score:74.5 best_domain_score:74.3 name:TIGR02937; db:TIGRFAMs.hmm|TIGR02999 evalue:3e-60 score:202.4 best_domain_score:202.2 name:TIGR02999;
81782 80847 CDS
ID metaerg.pl|03802
allgo_ids GO:0016746;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726756.1 16 305 evalue:1.0e-118 qcov:93.20 identity:73.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF01553;
pfam_desc Acyltransferase;
pfam_id Acyltransferase;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:5.9e-16 score:57.6 best_domain_score:57.0 name:Acyltransferase;
tm_num 2;
81782 80847 transmembrane_helix
ID metaerg.pl|03803
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology o80904-80972i81207-81275o;
83280 81775 CDS
ID metaerg.pl|03804
allgo_ids GO:0005515;
allko_ids K08801; K07704; K02478;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Halomonas_D;s__Halomonas_D sp002286965;
genomedb_acc GCF_002286965.1;
genomedb_target db:genomedb|GCF_002286965.1|WP_095616510.1 18 498 evalue:1.5e-87 qcov:96.00 identity:41.10;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF01590; PF00990;
pfam_desc GAF domain; Diguanylate cyclase, GGDEF domain;
pfam_id GAF; GGDEF;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:3.8e-05 score:23.6 best_domain_score:22.0 name:GAF; db:Pfam-A.hmm|PF00990.21 evalue:4e-41 score:139.7 best_domain_score:138.8 name:GGDEF;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:1e-38 score:131.8 best_domain_score:131.1 name:TIGR00254;
83421 83903 CDS
ID metaerg.pl|03805
allko_ids K09767;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726755.1 1 160 evalue:6.4e-64 qcov:100.00 identity:81.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF04461;
pfam_desc Protein of unknown function (DUF520);
pfam_id DUF520;
pfam_target db:Pfam-A.hmm|PF04461.13 evalue:7.5e-65 score:217.2 best_domain_score:217.0 name:DUF520;
sprot_desc hypothetical protein;
sprot_id sp|Q31ED1|Y1902_HYDCU;
sprot_target db:uniprot_sprot|sp|Q31ED1|Y1902_HYDCU 1 160 evalue:1.3e-50 qcov:100.00 identity:64.00;
84357 83935 CDS
ID metaerg.pl|03806
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
tm_num 2;
84357 83935 transmembrane_helix
ID metaerg.pl|03807
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i83971-84039o84049-84108i;
84943 84440 CDS
ID metaerg.pl|03808
allgo_ids GO:0019825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726754.1 8 167 evalue:2.7e-49 qcov:95.80 identity:61.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF01152;
pfam_desc Bacterial-like globin;
pfam_id Bac_globin;
pfam_target db:Pfam-A.hmm|PF01152.21 evalue:7.3e-13 score:48.0 best_domain_score:47.6 name:Bac_globin;
sp YES;
84440 84499 lipoprotein_signal_peptide
ID metaerg.pl|03809
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
86000 84975 CDS
ID metaerg.pl|03810
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169925.1 10 341 evalue:9.5e-134 qcov:97.40 identity:73.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF11231;
pfam_desc Protein of unknown function (DUF3034);
pfam_id DUF3034;
pfam_target db:Pfam-A.hmm|PF11231.8 evalue:1.5e-95 score:318.9 best_domain_score:318.7 name:DUF3034;
sp YES;
84975 85031 signal_peptide
ID metaerg.pl|03811
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
86147 86716 CDS
ID metaerg.pl|03812
allgo_ids GO:0003700; GO:0006352; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas sp001801685;
genomedb_acc GCA_001801685.1;
genomedb_target db:genomedb|GCA_001801685.1|OGT55759.1 4 182 evalue:6.9e-33 qcov:94.70 identity:44.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF07638; PF04542; PF04545; PF08281;
pfam_desc ECF sigma factor; Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_ECF; Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF07638.11 evalue:9.7e-06 score:24.8 best_domain_score:24.1 name:Sigma70_ECF; db:Pfam-A.hmm|PF04542.14 evalue:6.8e-16 score:57.0 best_domain_score:56.1 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:6e-11 score:40.9 best_domain_score:40.9 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:2.3e-13 score:48.8 best_domain_score:47.8 name:Sigma70_r4_2;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:1.2e-22 score:79.5 best_domain_score:79.3 name:TIGR02937;
86713 87174 CDS
ID metaerg.pl|03813
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas sp001801685;
genomedb_acc GCA_001801685.1;
genomedb_target db:genomedb|GCA_001801685.1|OGT55760.1 14 137 evalue:4.7e-24 qcov:81.00 identity:45.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF07883; PF12973;
pfam_desc Cupin domain; ChrR Cupin-like domain;
pfam_id Cupin_2; Cupin_7;
pfam_target db:Pfam-A.hmm|PF07883.11 evalue:3.2e-07 score:29.2 best_domain_score:28.5 name:Cupin_2; db:Pfam-A.hmm|PF12973.7 evalue:1.7e-16 score:59.2 best_domain_score:58.4 name:Cupin_7;
88629 87202 CDS
ID metaerg.pl|03814
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Dokdonella;s__Dokdonella sp002632325;
genomedb_acc GCA_002632325.1;
genomedb_target db:genomedb|GCA_002632325.1|NSJK01000013.1_34 27 462 evalue:6.8e-13 qcov:91.80 identity:25.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
sp YES;
tm_num 1;
87202 87267 signal_peptide
ID metaerg.pl|03815
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
88629 87202 transmembrane_helix
ID metaerg.pl|03816
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology o88537-88605i;
89606 88626 CDS
ID metaerg.pl|03817
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
sp YES;
88626 88670 lipoprotein_signal_peptide
ID metaerg.pl|03818
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
90753 89707 CDS
ID metaerg.pl|03819
allec_ids 3.5.2.3;
allgo_ids GO:0016787; GO:0004151; GO:0008270; GO:0044205; GO:0019856;
allko_ids K01465;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726750.1 1 341 evalue:2.2e-141 qcov:98.00 identity:73.30;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
metacyc_pathway_id PWY0-162; PRPP-PWY; PWY-5686;
metacyc_pathway_name superpathway of pyrimidine ribonucleotides de novo biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;;
metacyc_pathway_type Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; Super-Pathways;; UMP-Biosynthesis;;
pfam_acc PF01979;
pfam_desc Amidohydrolase family;
pfam_id Amidohydro_1;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:2.4e-17 score:62.5 best_domain_score:61.8 name:Amidohydro_1;
sprot_desc Dihydroorotase;
sprot_id sp|Q1GYZ0|PYRC_METFK;
sprot_target db:uniprot_sprot|sp|Q1GYZ0|PYRC_METFK 1 345 evalue:1.8e-134 qcov:99.10 identity:67.00;
tigrfam_acc TIGR00856;
tigrfam_desc dihydroorotase, homodimeric type;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name pyrC_dimer;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00856 evalue:7.3e-137 score:455.0 best_domain_score:454.9 name:TIGR00856;
90867 92108 CDS
ID metaerg.pl|03820
allec_ids 1.3.1.-;
allgo_ids GO:0016491; GO:0055114; GO:0016021; GO:0005886; GO:0009247;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726749.1 1 411 evalue:5.4e-192 qcov:99.50 identity:78.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
metacyc_pathway_id PWY-5466; PWY-5972; PWY-3461; PWY-5729; PWY-5367; PWY5F9-3233; PWY-6088; PWY1A0-6325; HCAMHPDEG-PWY; PWY-3481; PWY-5393; PWY-5063; PWY-5064; PWY-5863;
metacyc_pathway_name matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);; L-tyrosine biosynthesis II;; vestitol and sativan biosynthesis;; petroselinate biosynthesis;; phthalate degradation (aerobic);; 3-chlorobenzoate degradation I (via chlorocatechol);; actinorhodin biosynthesis;; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; raspberry ketone biosynthesis;; phytyl diphosphate biosynthesis;; chlorophyll a biosynthesis II;; superpathway of phylloquinol biosynthesis;;
metacyc_pathway_type LIGNAN-SYN;; Stearate-Biosynthesis;; TYROSINE-SYN;; ISOFLAVONOID-SYN;; Unsaturated-Fatty-Acids-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; 3-Chlorobenzoate-Degradation;; Antibiotic-Biosynthesis;; Phenolic-Compounds-Degradation;; Amino-Acid-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Phytyl-Diphosphate-Biosynthesis;; Chlorophyll-a-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF03435;
pfam_desc Saccharopine dehydrogenase NADP binding domain;
pfam_id Sacchrp_dh_NADP;
pfam_target db:Pfam-A.hmm|PF03435.18 evalue:7.7e-15 score:54.5 best_domain_score:54.0 name:Sacchrp_dh_NADP;
sprot_desc Putative trans-acting enoyl reductase Rv2449c;
sprot_id sp|O53176|Y2449_MYCTU;
sprot_target db:uniprot_sprot|sp|O53176|Y2449_MYCTU 5 412 evalue:3.9e-72 qcov:98.80 identity:39.90;
92644 92105 CDS
ID metaerg.pl|03821
allgo_ids GO:0009882; GO:0071949;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Saccharospirillaceae;g__Reinekea;s__Reinekea blandensis;
genomedb_acc GCF_000153185.1;
genomedb_target db:genomedb|GCF_000153185.1|WP_008047183.1 7 179 evalue:3.9e-38 qcov:96.60 identity:50.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF04940;
pfam_desc Sensors of blue-light using FAD;
pfam_id BLUF;
pfam_target db:Pfam-A.hmm|PF04940.12 evalue:2.4e-28 score:97.3 best_domain_score:96.9 name:BLUF;
92813 93727 CDS
ID metaerg.pl|03822
allko_ids K06911;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Nitrococcaceae;g__E85;s__E85 sp003149435;
genomedb_acc GCF_003149435.1;
genomedb_target db:genomedb|GCF_003149435.1|WP_109676457.1 1 303 evalue:3.7e-113 qcov:99.70 identity:63.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF02678; PF05726;
pfam_desc Pirin; Pirin C-terminal cupin domain;
pfam_id Pirin; Pirin_C;
pfam_target db:Pfam-A.hmm|PF02678.16 evalue:1.7e-34 score:117.2 best_domain_score:115.9 name:Pirin; db:Pfam-A.hmm|PF05726.13 evalue:5.4e-26 score:90.2 best_domain_score:89.1 name:Pirin_C;
sprot_desc Pirin-like protein CC_3178;
sprot_id sp|P58114|Y3178_CAUVC;
sprot_target db:uniprot_sprot|sp|P58114|Y3178_CAUVC 19 303 evalue:1.4e-74 qcov:93.80 identity:51.20;
93724 94257 CDS
ID metaerg.pl|03823
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726742.1 2 177 evalue:1.9e-69 qcov:99.40 identity:72.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF06041;
pfam_desc Bacterial protein of unknown function (DUF924);
pfam_id DUF924;
pfam_target db:Pfam-A.hmm|PF06041.11 evalue:3.9e-63 score:212.1 best_domain_score:211.9 name:DUF924;
95696 94263 CDS
ID metaerg.pl|03824
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_B;s__Halomonas_B sp001971685;
genomedb_acc GCF_001971685.1;
genomedb_target db:genomedb|GCF_001971685.1|WP_076746503.1 53 467 evalue:1.5e-108 qcov:87.00 identity:49.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
sp YES;
94263 94337 signal_peptide
ID metaerg.pl|03825
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
98115 95710 CDS
ID metaerg.pl|03826
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A denitrificans;
genomedb_acc GCF_002000365.1;
genomedb_target db:genomedb|GCF_002000365.1|WP_077280006.1 18 780 evalue:1.4e-132 qcov:95.30 identity:38.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
sp YES;
95710 95790 signal_peptide
ID metaerg.pl|03827
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
98835 98251 CDS
ID metaerg.pl|03828
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
sp YES;
98251 98307 signal_peptide
ID metaerg.pl|03829
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
99762 98965 CDS
ID metaerg.pl|03830
allec_ids 4.2.1.149;
allgo_ids GO:0003824; GO:0016836; GO:0009437;
allko_ids K07515; K10527; K01825; K07514; K15016; K13767; K00022; K01692; K07516; K01782; K08299;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__PGZG01;s__PGZG01 sp002840115;
genomedb_acc GCA_002840115.1;
genomedb_target db:genomedb|GCA_002840115.1|PKM21865.1 4 262 evalue:2.2e-93 qcov:97.70 identity:65.30;
kegg_pathway_id 00310; 00281; 00280; 00632; 00930; 00380; 01040; 00062; 00903; 00640; 00650; 00071; 00410; 00592;
kegg_pathway_name Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Biosynthesis of unsaturated fatty acids; Fatty acid elongation in mitochondria; Limonene and pinene degradation; Propanoate metabolism; Butanoate metabolism; Fatty acid metabolism; beta-Alanine metabolism; alpha-Linolenic acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:6.4e-44 score:149.4 best_domain_score:149.2 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:6.7e-32 score:110.5 best_domain_score:96.4 name:ECH_2;
sprot_desc Carnitinyl-CoA dehydratase;
sprot_id sp|A8ALR7|CAID_CITK8;
sprot_target db:uniprot_sprot|sp|A8ALR7|CAID_CITK8 19 260 evalue:1.0e-20 qcov:91.30 identity:33.30;
100696 99794 CDS
ID metaerg.pl|03831
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__SW121;s__SW121 sp003259155;
genomedb_acc GCF_003259155.1;
genomedb_target db:genomedb|GCF_003259155.1|WP_111642261.1 1 300 evalue:1.1e-106 qcov:100.00 identity:67.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF01062;
pfam_desc Bestrophin, RFP-TM, chloride channel;
pfam_id Bestrophin;
pfam_target db:Pfam-A.hmm|PF01062.21 evalue:6.2e-37 score:126.8 best_domain_score:126.5 name:Bestrophin;
tm_num 4;
100696 99794 transmembrane_helix
ID metaerg.pl|03832
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i99851-99910o99923-99979i100415-100468o100478-100546i;
101604 100693 CDS
ID metaerg.pl|03833
allgo_ids GO:0003700; GO:0006355; GO:0003677;
allko_ids K21698;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37800.1 1 301 evalue:6.5e-118 qcov:99.30 identity:71.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:6.1e-15 score:54.2 best_domain_score:53.1 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:4.7e-39 score:133.2 best_domain_score:132.7 name:LysR_substrate;
sprot_desc HTH-type transcriptional activator AaeR;
sprot_id sp|P67664|AAER_ECO57;
sprot_target db:uniprot_sprot|sp|P67664|AAER_ECO57 1 300 evalue:5.9e-25 qcov:99.00 identity:28.00;
101725 102591 CDS
ID metaerg.pl|03834
allec_ids 1.13.11.24;
allgo_ids GO:0046872; GO:0008127;
allko_ids K06911;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37801.1 1 286 evalue:4.6e-129 qcov:99.30 identity:76.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF02678; PF05726;
pfam_desc Pirin; Pirin C-terminal cupin domain;
pfam_id Pirin; Pirin_C;
pfam_target db:Pfam-A.hmm|PF02678.16 evalue:2.6e-34 score:116.7 best_domain_score:115.8 name:Pirin; db:Pfam-A.hmm|PF05726.13 evalue:2e-29 score:101.2 best_domain_score:98.2 name:Pirin_C;
sprot_desc Putative quercetin 2,3-dioxygenase PA2418;
sprot_id sp|Q9I163|Y2418_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I163|Y2418_PSEAE 1 285 evalue:2.4e-100 qcov:99.00 identity:62.80;
104573 102765 CDS
ID metaerg.pl|03835
allgo_ids GO:0030288;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF03783; PF13036;
pfam_desc Curli production assembly/transport component CsgG; Peptidoglycan-synthase activator LpoB;
pfam_id CsgG; LpoB;
pfam_target db:Pfam-A.hmm|PF03783.14 evalue:2.3e-39 score:134.1 best_domain_score:133.5 name:CsgG; db:Pfam-A.hmm|PF13036.6 evalue:1.1e-05 score:24.6 best_domain_score:23.3 name:LpoB;
sp YES;
102765 102839 signal_peptide
ID metaerg.pl|03836
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
106914 104905 CDS
ID metaerg.pl|03837
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725071.1 2 662 evalue:5.3e-80 qcov:98.80 identity:34.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF05048;
pfam_desc Periplasmic copper-binding protein (NosD);
pfam_id NosD;
pfam_target db:Pfam-A.hmm|PF05048.13 evalue:5.8e-09 score:34.8 best_domain_score:12.5 name:NosD;
sp YES;
tigrfam_acc TIGR01376;
tigrfam_desc chlamydial polymorphic outer membrane protein repeat;
tigrfam_name POMP_repeat;
tigrfam_target db:TIGRFAMs.hmm|TIGR01376 evalue:0.0012 score:17.8 best_domain_score:11.1 name:TIGR01376;
104905 105003 signal_peptide
ID metaerg.pl|03838
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
109395 107170 CDS
ID metaerg.pl|03839
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium aurantiibacter;
genomedb_acc GCF_002251775.1;
genomedb_target db:genomedb|GCF_002251775.1|WP_094485787.1 35 565 evalue:1.6e-13 qcov:71.70 identity:26.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF17517;
pfam_desc IgGFc binding protein;
pfam_id IgGFc_binding;
pfam_target db:Pfam-A.hmm|PF17517.2 evalue:1.1e-23 score:83.2 best_domain_score:81.9 name:IgGFc_binding;
sp YES;
107170 107313 signal_peptide
ID metaerg.pl|03840
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
109885 109619 CDS
ID metaerg.pl|03841
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pseudorhodoferax;s__Pseudorhodoferax sp001422405;
genomedb_acc GCF_001422405.1;
genomedb_target db:genomedb|GCF_001422405.1|WP_056176201.1 1 87 evalue:2.7e-16 qcov:98.90 identity:56.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
tm_num 3;
109885 109619 transmembrane_helix
ID metaerg.pl|03842
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i109631-109699o109712-109780i109814-109873o;
110051 111556 CDS
ID metaerg.pl|03843
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37206.1 39 484 evalue:1.4e-170 qcov:89.00 identity:70.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF09335;
pfam_desc SNARE associated Golgi protein;
pfam_id SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF09335.11 evalue:7.8e-14 score:51.4 best_domain_score:51.4 name:SNARE_assoc;
tm_num 10;
110051 111556 transmembrane_helix
ID metaerg.pl|03844
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
topology i110204-110272o110330-110398i110585-110653o110681-110749i110882-110950o111068-111127i111131-111199o111242-111310i111329-111397o111407-111475i;
113465 111567 CDS
ID metaerg.pl|03845
allgo_ids GO:0016787;
allko_ids K01303; K01730;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Glaciecola;s__Glaciecola punicea;
genomedb_acc GCF_000252165.1;
genomedb_target db:genomedb|GCF_000252165.1|WP_081483929.1 24 620 evalue:1.0e-202 qcov:94.50 identity:56.10;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
pfam_acc PF00561; PF00135; PF01738; PF00930; PF12146; PF07676; PF02129; PF00326;
pfam_desc alpha/beta hydrolase fold; Carboxylesterase family; Dienelactone hydrolase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; Serine aminopeptidase, S33; WD40-like Beta Propeller Repeat; X-Pro dipeptidyl-peptidase (S15 family); Prolyl oligopeptidase family;
pfam_id Abhydrolase_1; COesterase; DLH; DPPIV_N; Hydrolase_4; PD40; Peptidase_S15; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:2.8e-06 score:26.4 best_domain_score:24.7 name:Abhydrolase_1; db:Pfam-A.hmm|PF00135.28 evalue:1.4e-06 score:26.7 best_domain_score:26.2 name:COesterase; db:Pfam-A.hmm|PF01738.18 evalue:2.2e-14 score:52.8 best_domain_score:51.7 name:DLH; db:Pfam-A.hmm|PF00930.21 evalue:8.3e-14 score:50.3 best_domain_score:30.5 name:DPPIV_N; db:Pfam-A.hmm|PF12146.8 evalue:1.2e-10 score:40.3 best_domain_score:31.8 name:Hydrolase_4; db:Pfam-A.hmm|PF07676.12 evalue:1e-14 score:53.2 best_domain_score:19.6 name:PD40; db:Pfam-A.hmm|PF02129.18 evalue:1.2e-16 score:60.3 best_domain_score:53.9 name:Peptidase_S15; db:Pfam-A.hmm|PF00326.21 evalue:2.7e-39 score:134.1 best_domain_score:133.6 name:Peptidase_S9;
sp YES;
111567 111626 signal_peptide
ID metaerg.pl|03846
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0348683; 67.8216; ; 0.1389; 67.9954;
>Feature NODE_21_length_112339_cov_45.8205
2 847 CDS
ID metaerg.pl|03847
allgo_ids GO:0016021; GO:0055085;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093086.1 1 281 evalue:8.1e-139 qcov:100.00 identity:95.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF07690; PF03209;
pfam_desc Major Facilitator Superfamily; PUCC protein;
pfam_id MFS_1; PUCC;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:1.3e-13 score:49.8 best_domain_score:49.8 name:MFS_1; db:Pfam-A.hmm|PF03209.15 evalue:1.1e-70 score:237.9 best_domain_score:237.6 name:PUCC;
tm_num 7;
2 847 transmembrane_helix
ID metaerg.pl|03848
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology o44-103i224-283o341-409i428-487o500-568i605-673o701-769i;
887 1693 CDS
ID metaerg.pl|03849
allec_ids 3.1.3.25;
allgo_ids GO:0046854; GO:0008934; GO:0052832; GO:0052833; GO:0046872; GO:0046855;
allko_ids K01092;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195463.1 1 268 evalue:3.2e-145 qcov:100.00 identity:92.20;
kegg_pathway_id 00562; 00521;
kegg_pathway_name Inositol phosphate metabolism; Streptomycin biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PWY-2301;
metacyc_pathway_name myo-inositol biosynthesis;;
metacyc_pathway_type Cyclitols-Biosynthesis;;
pfam_acc PF00459;
pfam_desc Inositol monophosphatase family;
pfam_id Inositol_P;
pfam_target db:Pfam-A.hmm|PF00459.25 evalue:3.4e-45 score:153.9 best_domain_score:153.3 name:Inositol_P;
sprot_desc Inositol-1-monophosphatase;
sprot_id sp|Q98F59|SUHB_RHILO;
sprot_target db:uniprot_sprot|sp|Q98F59|SUHB_RHILO 6 222 evalue:4.7e-18 qcov:81.00 identity:29.60;
1771 2733 CDS
ID metaerg.pl|03850
allec_ids 1.1.1.329;
allgo_ids GO:0055114; GO:0046872; GO:0016491;
allko_ids K00001;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc linckia_A;
genomedb_acc GCF_002608075.1;
genomedb_target db:genomedb|GCF_002608075.1|WP_099068557.1 3 320 evalue:1.4e-158 qcov:99.40 identity:85.80;
kegg_pathway_id 00071; 00350; 00120; 00010; 00624; 00641;
kegg_pathway_name Fatty acid metabolism; Tyrosine metabolism; Bile acid biosynthesis; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; 3-Chloroacrylic acid degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF08240; PF00107;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:1.1e-20 score:72.8 best_domain_score:72.1 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:2.9e-09 score:36.2 best_domain_score:34.2 name:ADH_zinc_N;
sprot_desc 2-deoxy-scyllo-inosamine dehydrogenase;
sprot_id sp|Q2MF22|DOIAD_STRSD;
sprot_target db:uniprot_sprot|sp|Q2MF22|DOIAD_STRSD 21 309 evalue:5.4e-37 qcov:90.30 identity:35.90;
3069 2782 CDS
ID metaerg.pl|03851
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195465.1 1 95 evalue:1.1e-39 qcov:100.00 identity:87.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
tm_num 1;
3069 2782 transmembrane_helix
ID metaerg.pl|03852
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology o2824-2892i;
4281 3241 CDS
ID metaerg.pl|03853
allec_ids 2.5.1.62; 2.5.1.-;
allgo_ids GO:0016021; GO:0016765; GO:0009507; GO:0031969; GO:0009534; GO:0046408; GO:0015995;
allko_ids K04040;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093090.1 1 346 evalue:4.0e-188 qcov:100.00 identity:96.80;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PWY-5134; PWY-6520; PWY-5838; PWY-5064; PWY-4502; PWY-5899; PWY-6403; PWY-5817; PWY-6129; PWY-5133; PWY-5864; PWY-5027; PWY-5893; PWY-6383; PWY-5805; PWY-5783; POLYISOPRENSYN-PWY; PWY-5861; PWY-724; PWY-6262; PWY-6263; PWY-5132; PWY-5897; PWY-5808; PWY-5896; PWY-5862; PWY-5845; PWY-5068; PWY-5086; PWY-2681; PWY-5898; PWY-5816; PWY-5863; PWY-5135; PWY-6404; PWY-5806; PWY-5701; PWY-5140;
metacyc_pathway_name superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; superpathway of menaquinol-8 biosynthesis I;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; superpathway of menaquinol-13 biosynthesis;; carrageenan biosynthesis;; dodecaprenyl diphosphate biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; polyisoprenoid biosynthesis (E. coli);; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; demethylmenaquinol-8 biosynthesis II;; superpathway of menaquinol-8 biosynthesis II;; lupulone and humulone biosynthesis;; superpathway of menaquinol-11 biosynthesis;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; chlorophyll cycle;; chlorophyll a biosynthesis I;; trans-zeatin biosynthesis;; superpathway of menaquinol-12 biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; xanthohumol biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; shikonin biosynthesis;; cannabinoid biosynthesis;;
metacyc_pathway_type Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Polysaccharides-Biosynthesis;; Polyprenyl-Biosynthesis;; Lipid-Biosynthesis;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; PRENYLFLAVONOID-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; QUINONE-SYN;; TERPENOPHENOLICS-SYN;;
pfam_acc PF01040;
pfam_desc UbiA prenyltransferase family;
pfam_id UbiA;
pfam_target db:Pfam-A.hmm|PF01040.18 evalue:4.7e-34 score:117.0 best_domain_score:116.7 name:UbiA;
sprot_desc Chlorophyll synthase, chloroplastic;
sprot_id sp|Q38833|CHLG_ARATH;
sprot_target db:uniprot_sprot|sp|Q38833|CHLG_ARATH 34 343 evalue:8.0e-111 qcov:89.60 identity:63.20;
tigrfam_acc TIGR01476; TIGR02056;
tigrfam_desc bacteriochlorophyll/chlorophyll synthetase; chlorophyll synthase ChlG;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name chlor_syn_BchG; ChlG;
tigrfam_sub1role Chlorophyll and bacteriochlorphyll; Chlorophyll and bacteriochlorphyll;
tigrfam_target db:TIGRFAMs.hmm|TIGR01476 evalue:3.4e-120 score:399.9 best_domain_score:399.7 name:TIGR01476; db:TIGRFAMs.hmm|TIGR02056 evalue:8.8e-175 score:579.7 best_domain_score:579.5 name:TIGR02056;
tm_num 8;
4281 3241 transmembrane_helix
ID metaerg.pl|03854
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i3430-3498o3634-3702i3721-3789o3817-3885i3904-3957o4027-4095i4114-4173o4216-4275i;
5539 4439 CDS
ID metaerg.pl|03855
allec_ids 7.3.2.7;
allgo_ids GO:0005524; GO:0016887; GO:0015446; GO:0046685;
allko_ids K01551;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094063.1 1 366 evalue:1.3e-200 qcov:100.00 identity:97.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF02374; PF17886;
pfam_desc Anion-transporting ATPase; HSP20-like domain found in ArsA;
pfam_id ArsA_ATPase; ArsA_HSP20;
pfam_target db:Pfam-A.hmm|PF02374.15 evalue:2.3e-26 score:91.9 best_domain_score:91.3 name:ArsA_ATPase; db:Pfam-A.hmm|PF17886.1 evalue:1.4e-17 score:62.2 best_domain_score:61.0 name:ArsA_HSP20;
sprot_desc Putative arsenical pump-driving ATPase;
sprot_id sp|Q46366|ARSA_CHLTE;
sprot_target db:uniprot_sprot|sp|Q46366|ARSA_CHLTE 4 366 evalue:7.4e-22 qcov:99.20 identity:24.60;
5819 5628 CDS
ID metaerg.pl|03856
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093091.1 1 63 evalue:2.7e-26 qcov:100.00 identity:96.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF11061;
pfam_desc Protein of unknown function (DUF2862);
pfam_id DUF2862;
pfam_target db:Pfam-A.hmm|PF11061.8 evalue:2.2e-27 score:93.9 best_domain_score:93.8 name:DUF2862;
6453 7307 CDS
ID metaerg.pl|03857
allgo_ids GO:0016020;
allko_ids K09690;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093094.1 4 284 evalue:4.5e-137 qcov:98.90 identity:89.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF01061;
pfam_desc ABC-2 type transporter;
pfam_id ABC2_membrane;
pfam_target db:Pfam-A.hmm|PF01061.24 evalue:1.9e-28 score:98.5 best_domain_score:98.1 name:ABC2_membrane;
tm_num 6;
6453 7307 transmembrane_helix
ID metaerg.pl|03858
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i6588-6656o6714-6782i6819-6917o6960-7028i7047-7106o7203-7271i;
7374 8687 CDS
ID metaerg.pl|03859
allgo_ids GO:0005524; GO:0016887;
allko_ids K02006; K09693; K02045; K01995; K10111; K09691;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_B;s__Tolypothrix_B campylonemoides;
genomedb_acc GCF_000828075.2;
genomedb_target db:genomedb|GCF_000828075.2|WP_041038351.1 1 437 evalue:4.6e-181 qcov:100.00 identity:73.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00005; PF14524;
pfam_desc ABC transporter; Wzt C-terminal domain;
pfam_id ABC_tran; Wzt_C;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:2.7e-22 score:79.0 best_domain_score:77.2 name:ABC_tran; db:Pfam-A.hmm|PF14524.6 evalue:5.9e-20 score:71.0 best_domain_score:70.3 name:Wzt_C;
8680 10518 CDS
ID metaerg.pl|03860
allgo_ids GO:0008168;
allko_ids K00568; K00599;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__HT-58-2;s__HT-58-2 sp002163975;
genomedb_acc GCF_002163975.1;
genomedb_target db:genomedb|GCF_002163975.1|WP_087542273.1 1 611 evalue:1.2e-259 qcov:99.80 identity:70.00;
kegg_pathway_id 00450; 00626; 00380; 00340; 00150; 00130; 00350;
kegg_pathway_name Selenoamino acid metabolism; Naphthalene and anthracene degradation; Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism; Ubiquinone biosynthesis; Tyrosine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF02353; PF08241; PF08242; PF13489; PF13578; PF13649; PF13847; PF05175; PF05401; PF03848;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain; Nodulation protein S (NodS); Tellurite resistance protein TehB;
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_24; Methyltransf_25; Methyltransf_31; MTS; NodS; TehB;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:8.7e-11 score:40.8 best_domain_score:40.0 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:1.2e-16 score:60.4 best_domain_score:50.4 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:5.9e-17 score:61.5 best_domain_score:48.4 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:2e-19 score:69.2 best_domain_score:60.7 name:Methyltransf_23; db:Pfam-A.hmm|PF13578.6 evalue:9.4e-07 score:29.1 best_domain_score:20.0 name:Methyltransf_24; db:Pfam-A.hmm|PF13649.6 evalue:1e-19 score:70.3 best_domain_score:50.8 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:2.2e-17 score:62.5 best_domain_score:49.8 name:Methyltransf_31; db:Pfam-A.hmm|PF05175.14 evalue:5.5e-07 score:28.5 best_domain_score:27.4 name:MTS; db:Pfam-A.hmm|PF05401.11 evalue:9.9e-06 score:24.5 best_domain_score:23.5 name:NodS; db:Pfam-A.hmm|PF03848.14 evalue:6e-09 score:34.8 best_domain_score:33.6 name:TehB;
10595 12157 CDS
ID metaerg.pl|03861
allgo_ids GO:0008168;
allko_ids K00599; K10773;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp002949795;
genomedb_acc GCF_002949795.1;
genomedb_target db:genomedb|GCF_002949795.1|WP_104906093.1 1 519 evalue:2.6e-151 qcov:99.80 identity:54.70;
kegg_pathway_id 00626; 00450; 03410; 00350; 00380; 00340; 00150;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Base excision repair; Tyrosine metabolism; Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF08241; PF13489; PF13649; PF13847; PF07021;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methionine biosynthesis protein MetW;
pfam_id Methyltransf_11; Methyltransf_23; Methyltransf_25; Methyltransf_31; MetW;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:1.6e-14 score:53.5 best_domain_score:52.1 name:Methyltransf_11; db:Pfam-A.hmm|PF13489.6 evalue:1.8e-11 score:43.4 best_domain_score:41.7 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:5.1e-14 score:52.0 best_domain_score:48.8 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.8e-07 score:30.3 best_domain_score:28.9 name:Methyltransf_31; db:Pfam-A.hmm|PF07021.12 evalue:7.5e-10 score:37.9 best_domain_score:36.9 name:MetW;
12182 13225 CDS
ID metaerg.pl|03862
allko_ids K13668; K12996; K00703; K03844; K02844; K00712; K13677; K00749; K13003;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Leptolyngbyales;f__Leptolyngbyaceae;g__Leptolyngbya;s__Leptolyngbya sp001548435;
genomedb_acc GCF_001548435.1;
genomedb_target db:genomedb|GCF_001548435.1|WP_068385123.1 1 346 evalue:4.3e-134 qcov:99.70 identity:66.80;
kegg_pathway_id 00540; 01030; 00500; 00510; 01031;
kegg_pathway_name Lipopolysaccharide biosynthesis; Glycan structures - biosynthesis 1; Starch and sucrose metabolism; N-Glycan biosynthesis; Glycan structures - biosynthesis 2;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00534; PF13524; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyl transferases group 1; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_trans_1_2; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:4.2e-29 score:100.5 best_domain_score:99.8 name:Glycos_transf_1; db:Pfam-A.hmm|PF13524.6 evalue:3.4e-07 score:29.8 best_domain_score:28.1 name:Glyco_trans_1_2; db:Pfam-A.hmm|PF13692.6 evalue:6.7e-18 score:64.7 best_domain_score:64.1 name:Glyco_trans_1_4;
13258 13896 CDS
ID metaerg.pl|03863
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae;g__Kamptonema;s__Kamptonema formosum;
genomedb_acc GCF_000332155.1;
genomedb_target db:genomedb|GCF_000332155.1|WP_007357215.1 41 211 evalue:3.7e-59 qcov:80.70 identity:62.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF08241;
pfam_desc Methyltransferase domain;
pfam_id Methyltransf_11;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:2e-05 score:24.4 best_domain_score:23.4 name:Methyltransf_11;
13951 14763 CDS
ID metaerg.pl|03864
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Lunatimonas;s__Lunatimonas lonarensis;
genomedb_acc GCF_000390185.1;
genomedb_target db:genomedb|GCF_000390185.1|WP_010852344.1 4 270 evalue:1.2e-67 qcov:98.90 identity:48.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF13578;
pfam_desc Methyltransferase domain;
pfam_id Methyltransf_24;
pfam_target db:Pfam-A.hmm|PF13578.6 evalue:3.4e-09 score:36.9 best_domain_score:35.9 name:Methyltransf_24;
14785 17184 CDS
ID metaerg.pl|03865
allko_ids K00749; K13677; K08256; K12989; K00712; K13003; K03429; K12996; K13668; K00703; K02840; K03844; K02844;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Leptolyngbyales;f__Leptolyngbyaceae;g__Leptolyngbya;s__Leptolyngbya boryana;
genomedb_acc GCF_000353285.1;
genomedb_target db:genomedb|GCF_000353285.1|WP_017288369.1 1 786 evalue:8.3e-306 qcov:98.40 identity:64.70;
kegg_pathway_id 01031; 00561; 00500; 01030; 00510; 00540;
kegg_pathway_name Glycan structures - biosynthesis 2; Glycerolipid metabolism; Starch and sucrose metabolism; Glycan structures - biosynthesis 1; N-Glycan biosynthesis; Lipopolysaccharide biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00534; PF13439; PF13524; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_2; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:9.9e-35 score:118.8 best_domain_score:103.8 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:2.7e-09 score:36.5 best_domain_score:32.4 name:Glyco_transf_4; db:Pfam-A.hmm|PF13524.6 evalue:1.1e-17 score:63.4 best_domain_score:32.6 name:Glyco_trans_1_2; db:Pfam-A.hmm|PF13692.6 evalue:1.5e-40 score:138.0 best_domain_score:85.5 name:Glyco_trans_1_4;
17286 18260 CDS
ID metaerg.pl|03866
allec_ids 4.2.1.47;
allgo_ids GO:0003824; GO:0050662; GO:0005737; GO:0008446; GO:0070401; GO:0042351; GO:0019306; GO:0019673; GO:0009103; GO:0009243;
allko_ids K01711;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093098.1 1 322 evalue:1.2e-175 qcov:99.40 identity:92.90;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PWY-5739; PWY-66; PWY-5738; GDPRHAMSYN-PWY; PWY-5740; COLANSYN-PWY;
metacyc_pathway_name GDP-D-perosamine biosynthesis;; GDP-L-fucose biosynthesis I (from GDP-D-mannose);; GDP-6-deoxy-D-talose biosynthesis;; GDP-D-rhamnose biosynthesis;; GDP-L-colitose biosynthesis;; colanic acid building blocks biosynthesis;;
metacyc_pathway_type GDP-Sugar-Biosynthesis;; GDP-Sugar-Biosynthesis;; GDP-Sugar-Biosynthesis;; GDP-Sugar-Biosynthesis;; GDP-Sugar-Biosynthesis;; Carbohydrates-Biosynthesis; Super-Pathways;;
pfam_acc PF01370; PF16363; PF05368; PF04321;
pfam_desc NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; NmrA-like family; RmlD substrate binding domain;
pfam_id Epimerase; GDP_Man_Dehyd; NmrA; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01370.21 evalue:4.3e-64 score:215.5 best_domain_score:215.1 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:6.9e-119 score:396.4 best_domain_score:396.1 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF05368.13 evalue:5e-05 score:22.2 best_domain_score:21.4 name:NmrA; db:Pfam-A.hmm|PF04321.17 evalue:1.5e-08 score:33.3 best_domain_score:32.9 name:RmlD_sub_bind;
sprot_desc GDP-mannose 4,6-dehydratase;
sprot_id sp|Q51366|GM4D_PSEAE;
sprot_target db:uniprot_sprot|sp|Q51366|GM4D_PSEAE 4 320 evalue:2.1e-92 qcov:97.80 identity:49.80;
18269 19447 CDS
ID metaerg.pl|03867
allko_ids K13003; K12989; K00712; K08256; K13677; K13001; K00749; K03844; K12994; K02844; K12996; K13668; K03429; K00703;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp002949795;
genomedb_acc GCF_002949795.1;
genomedb_target db:genomedb|GCF_002949795.1|WP_104906088.1 1 392 evalue:1.4e-176 qcov:100.00 identity:78.60;
kegg_pathway_id 01031; 00561; 00540; 01030; 00500; 00510;
kegg_pathway_name Glycan structures - biosynthesis 2; Glycerolipid metabolism; Lipopolysaccharide biosynthesis; Glycan structures - biosynthesis 1; Starch and sucrose metabolism; N-Glycan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00534; PF13524; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyl transferases group 1; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_trans_1_2; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:1.6e-33 score:114.9 best_domain_score:114.2 name:Glycos_transf_1; db:Pfam-A.hmm|PF13524.6 evalue:4.3e-09 score:35.9 best_domain_score:34.8 name:Glyco_trans_1_2; db:Pfam-A.hmm|PF13692.6 evalue:4.5e-25 score:87.9 best_domain_score:86.3 name:Glyco_trans_1_4;
19447 20550 CDS
ID metaerg.pl|03868
allko_ids K12994; K02844; K03844; K13657; K00703; K02840; K13668; K12996; K03429; K13003; K00712; K12989; K13001; K00749; K08256; K13677;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198907.1 1 367 evalue:1.9e-180 qcov:100.00 identity:87.20;
kegg_pathway_id 00510; 01030; 00500; 00540; 01031; 00561;
kegg_pathway_name N-Glycan biosynthesis; Glycan structures - biosynthesis 1; Starch and sucrose metabolism; Lipopolysaccharide biosynthesis; Glycan structures - biosynthesis 2; Glycerolipid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00534; PF13439; PF13524; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_2; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:5.5e-35 score:119.7 best_domain_score:118.9 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:1.7e-10 score:40.4 best_domain_score:38.6 name:Glyco_transf_4; db:Pfam-A.hmm|PF13524.6 evalue:1.1e-08 score:34.6 best_domain_score:33.5 name:Glyco_trans_1_2; db:Pfam-A.hmm|PF13692.6 evalue:2e-25 score:89.0 best_domain_score:88.4 name:Glyco_trans_1_4;
20597 21178 CDS
ID metaerg.pl|03869
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198908.1 1 193 evalue:1.3e-100 qcov:100.00 identity:93.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF05685;
pfam_desc Putative restriction endonuclease;
pfam_id Uma2;
pfam_target db:Pfam-A.hmm|PF05685.12 evalue:1.2e-30 score:105.5 best_domain_score:105.2 name:Uma2;
sprot_desc hypothetical protein;
sprot_id sp|P73844|Y1609_SYNY3;
sprot_target db:uniprot_sprot|sp|P73844|Y1609_SYNY3 1 170 evalue:6.4e-33 qcov:88.10 identity:40.60;
23034 21265 CDS
ID metaerg.pl|03870
allec_ids 2.7.1.40;
allgo_ids GO:0016310; GO:0016772; GO:0005737; GO:0005829; GO:0005524; GO:0016301; GO:0000287; GO:0030955; GO:0004743; GO:0006096;
allko_ids K02821; K02812; K12406; K00873; K02744; K02793; K01007; K02794;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092260.1 1 589 evalue:0.0e+00 qcov:100.00 identity:97.80;
kegg_pathway_id 00230; 00710; 00010; 00720; 02060; 00620;
kegg_pathway_name Purine metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Reductive carboxylate cycle (CO2 fixation); Phosphotransferase system (PTS); Pyruvate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PWY-5484; P461-PWY; P341-PWY; PWY-6142; FERMENTATION-PWY; PWY-5723; P441-PWY; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; PWY-5464; ANAGLYCOLYSIS-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; GLYCOLYSIS-E-D; PWY-6146; P122-PWY; ANARESP1-PWY; GLYCOLYSIS; PWY-2221; P124-PWY; NPGLUCAT-PWY;
metacyc_pathway_name glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis V (Pyrococcus);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; mixed acid fermentation;; Rubisco shunt;; superpathway of N-acetylneuraminate degradation;; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; superpathway of glycolysis and the Entner-Doudoroff pathway;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; heterolactic fermentation;; ; glycolysis I (from glucose 6-phosphate);; Entner-Doudoroff pathway III (semi-phosphorylative);; Bifidobacterium shunt;; Entner-Doudoroff pathway II (non-phosphorylative);;
metacyc_pathway_type GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis; Super-Pathways;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism;; CARBOXYLATES-DEG; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Biosynthesis; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; ; GLYCOLYSIS-VARIANTS;; Entner-Duodoroff-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Entner-Duodoroff-Pathways;;
pfam_acc PF00391; PF00224; PF02887;
pfam_desc PEP-utilising enzyme, mobile domain; Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain;
pfam_id PEP-utilizers; PK; PK_C;
pfam_target db:Pfam-A.hmm|PF00391.23 evalue:3.7e-22 score:77.1 best_domain_score:74.6 name:PEP-utilizers; db:Pfam-A.hmm|PF00224.21 evalue:1.7e-125 score:417.7 best_domain_score:417.2 name:PK; db:Pfam-A.hmm|PF02887.16 evalue:9.6e-33 score:112.1 best_domain_score:109.8 name:PK_C;
sprot_desc Pyruvate kinase 2;
sprot_id sp|P73534|KPYK2_SYNY3;
sprot_target db:uniprot_sprot|sp|P73534|KPYK2_SYNY3 1 586 evalue:1.1e-237 qcov:99.50 identity:73.20;
tigrfam_acc TIGR01064;
tigrfam_desc pyruvate kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name pyruv_kin;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01064 evalue:4.6e-170 score:565.4 best_domain_score:564.9 name:TIGR01064;
23466 24356 CDS
ID metaerg.pl|03871
allgo_ids GO:0006629;
allko_ids K02294;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006199227.1 1 296 evalue:1.8e-173 qcov:100.00 identity:97.00;
kegg_pathway_id 00906;
kegg_pathway_name Carotenoid biosynthesis - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00487;
pfam_desc Fatty acid desaturase;
pfam_id FA_desaturase;
pfam_target db:Pfam-A.hmm|PF00487.24 evalue:2.4e-35 score:121.8 best_domain_score:121.2 name:FA_desaturase;
tm_num 5;
23466 24356 transmembrane_helix
ID metaerg.pl|03872
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology o23541-23609i23709-23777o23835-23903i23940-23999o24009-24077i;
24440 24805 CDS
ID metaerg.pl|03873
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092262.1 1 107 evalue:3.5e-54 qcov:88.40 identity:98.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF15643;
pfam_desc Papain fold toxin 2;
pfam_id Tox-PL-2;
pfam_target db:Pfam-A.hmm|PF15643.6 evalue:6.3e-41 score:137.9 best_domain_score:137.7 name:Tox-PL-2;
24819 25190 CDS
ID metaerg.pl|03874
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092263.1 1 123 evalue:4.9e-64 qcov:100.00 identity:98.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
25590 25306 CDS
ID metaerg.pl|03875
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195858.1 1 94 evalue:6.2e-43 qcov:100.00 identity:96.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
26030 25629 CDS
ID metaerg.pl|03876
allec_ids 5.4.99.5;
allko_ids K06208;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092265.1 1 133 evalue:5.0e-62 qcov:100.00 identity:93.20;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PHESYN; PWY-3461; PWY-6120; PWY-3481; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY; PWY-3462; TYRSYN;
metacyc_pathway_name L-phenylalanine biosynthesis I;; L-tyrosine biosynthesis II;; L-tyrosine biosynthesis III;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;; L-phenylalanine biosynthesis II;; L-tyrosine biosynthesis I;;
metacyc_pathway_type PHENYLALANINE-SYN;; TYROSINE-SYN;; TYROSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; PHENYLALANINE-SYN;; TYROSINE-SYN;;
pfam_acc PF07736;
pfam_desc Chorismate mutase type I;
pfam_id CM_1;
pfam_target db:Pfam-A.hmm|PF07736.11 evalue:3.1e-47 score:159.0 best_domain_score:158.9 name:CM_1;
tigrfam_acc TIGR01796;
tigrfam_desc chorismate mutase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name CM_mono_aroH;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01796 evalue:7.1e-52 score:174.0 best_domain_score:173.8 name:TIGR01796;
26944 26123 CDS
ID metaerg.pl|03877
allec_ids 3.4.21.-; 3.4.-.-;
allgo_ids GO:0006508; GO:0008233; GO:0008236;
allko_ids K04773;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092266.1 1 273 evalue:4.9e-149 qcov:100.00 identity:98.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00574; PF01343;
pfam_desc Clp protease; Peptidase family S49;
pfam_id CLP_protease; Peptidase_S49;
pfam_target db:Pfam-A.hmm|PF00574.23 evalue:5.5e-06 score:25.6 best_domain_score:21.1 name:CLP_protease; db:Pfam-A.hmm|PF01343.18 evalue:1.7e-50 score:170.2 best_domain_score:169.8 name:Peptidase_S49;
sprot_desc Putative protease slr0021;
sprot_id sp|Q55682|Y021_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55682|Y021_SYNY3 1 272 evalue:9.5e-107 qcov:99.60 identity:71.80;
tigrfam_acc TIGR00706;
tigrfam_desc signal peptide peptidase SppA, 36K type;
tigrfam_mainrole Protein fate;
tigrfam_name SppA_dom;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00706 evalue:1e-78 score:262.9 best_domain_score:262.7 name:TIGR00706;
27587 27291 CDS
ID metaerg.pl|03878
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092267.1 1 98 evalue:1.0e-40 qcov:100.00 identity:89.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
tm_num 2;
27587 27291 transmembrane_helix
ID metaerg.pl|03879
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i27324-27392o27492-27560i;
28084 28881 CDS
ID metaerg.pl|03880
allgo_ids GO:0043190; GO:0005886; GO:0005548; GO:0015914;
allko_ids K02066;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092268.1 1 265 evalue:3.3e-134 qcov:100.00 identity:97.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF02405;
pfam_desc Permease MlaE;
pfam_id MlaE;
pfam_target db:Pfam-A.hmm|PF02405.16 evalue:1e-78 score:263.1 best_domain_score:262.7 name:MlaE;
sprot_desc Probable ABC transporter permease protein slr1045;
sprot_id sp|P73009|Y1045_SYNY3;
sprot_target db:uniprot_sprot|sp|P73009|Y1045_SYNY3 1 262 evalue:8.1e-95 qcov:98.90 identity:69.10;
tigrfam_acc TIGR00056;
tigrfam_desc ABC transport permease subunit;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00056;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00056 evalue:2.4e-98 score:328.1 best_domain_score:327.9 name:TIGR00056;
tm_num 5;
28084 28881 transmembrane_helix
ID metaerg.pl|03881
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology o28111-28179i28240-28299o28546-28614i28651-28719o28777-28845i;
28943 29359 CDS
ID metaerg.pl|03882
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092269.1 1 138 evalue:4.2e-64 qcov:100.00 identity:93.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF11317;
pfam_desc Protein of unknown function (DUF3119);
pfam_id DUF3119;
pfam_target db:Pfam-A.hmm|PF11317.8 evalue:1.5e-44 score:150.5 best_domain_score:150.3 name:DUF3119;
tm_num 1;
28943 29359 transmembrane_helix
ID metaerg.pl|03883
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology o29033-29128i;
29466 30785 CDS
ID metaerg.pl|03884
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092270.1 1 439 evalue:2.8e-215 qcov:100.00 identity:91.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF11285;
pfam_desc Protein of unknown function (DUF3086);
pfam_id DUF3086;
pfam_target db:Pfam-A.hmm|PF11285.8 evalue:7.1e-138 score:457.5 best_domain_score:457.5 name:DUF3086;
30813 31493 CDS
ID metaerg.pl|03885
allec_ids 2.3.1.275; 2.3.1.-;
allgo_ids GO:0005886; GO:0008654; GO:0043772; GO:0016021;
allko_ids K08591;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094001.1 1 225 evalue:4.3e-106 qcov:99.60 identity:91.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PWY-6318; PWY-5307; PWY-5405; PWY-5972; KDO-LIPASYN-PWY; PWY-6412; PWY-5393; PWY-5965; PWY-5209; PWY-5400; PWY-6404; CENTBENZCOA-PWY; PWY-6316; PWY-5313; PWY-5140; PWY-6411; PWY-5987; PWY-5268; PWY0-881; PWY-84; THREOCAT-PWY; PWY-6438; P3-PWY; PWY-6295; PWY-6515; ECASYN-PWY; PWY-5284; PWY-5080; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5139; PWY-6310; KDO-NAGLIPASYN-PWY; PWY-4801; PWY-5184; BENZCOA-PWY; PWY-6418; PWY-6312; PWY-6442; PWY-6397; PWY1-3; PWY-6113; PWYG-321; FASYN-INITIAL-PWY; PWY-6413; PWY1A0-6325; PWY-6432; LPSSYN-PWY; PWY-5437; PWY-5981; PWY-5477;
metacyc_pathway_name L-phenylalanine degradation IV (mammalian, via side chain);; gentiodelphin biosynthesis;; superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; (Kdo)2-lipid A biosynthesis I;; ginsenoside degradation II;; raspberry ketone biosynthesis;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; amaranthin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; cannabinoid biosynthesis;; ginsenoside degradation I;; sorgoleone biosynthesis;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; resveratrol biosynthesis;; superpathway of L-threonine metabolism;; phenylphenalenone biosynthesis;; gallate degradation III (anaerobic);; ; phloridzin biosynthesis;; enterobacterial common antigen biosynthesis;; shisonin biosynthesis;; very long chain fatty acid biosynthesis I;; sophorolipid biosynthesis;; pelargonidin conjugates biosynthesis;; aloesone biosynthesis II;; superpathway of (Kdo)2-lipid A biosynthesis;; aloesone biosynthesis I;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; 4-hydroxycoumarin and dicoumarol biosynthesis;; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; ginsenoside degradation III;; actinorhodin biosynthesis;; curcuminoid biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; gallotannin biosynthesis;;
metacyc_pathway_type PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; Lipid-Biosynthesis;; Ginsenoside-Degradation;; POLYKETIDE-SYN;; Fatty-acid-biosynthesis;; METHANOGENESIS;; BETALAIN-ALKALOIDS;; Cell-Wall-Biosynthesis; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; TERPENOPHENOLICS-SYN;; Ginsenoside-Degradation;; QUINONE-SYN;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; Super-Pathways; THREONINE-DEG;; POLYKETIDE-SYN;; GALLATE-DEG;; ; FLAVONOID-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis;; Lipid-Biosynthesis;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; Cell-Wall-Biosynthesis;; Storage-Compounds-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOID-DEG;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; GALLOTANNINS;;
pfam_acc PF02660;
pfam_desc Glycerol-3-phosphate acyltransferase;
pfam_id G3P_acyltransf;
pfam_target db:Pfam-A.hmm|PF02660.15 evalue:6.6e-51 score:171.8 best_domain_score:171.6 name:G3P_acyltransf;
sprot_desc Glycerol-3-phosphate acyltransferase;
sprot_id sp|Q8YZG8|PLSY_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YZG8|PLSY_NOSS1 1 221 evalue:8.1e-96 qcov:97.80 identity:82.80;
tigrfam_acc TIGR00023;
tigrfam_desc acyl-phosphate glycerol 3-phosphate acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name TIGR00023;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00023 evalue:5.5e-58 score:195.2 best_domain_score:194.8 name:TIGR00023;
tm_num 6;
30813 31493 transmembrane_helix
ID metaerg.pl|03886
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i30825-30893o30984-31052i31110-31178o31206-31274i31287-31346o31356-31403i;
31973 31638 CDS
ID metaerg.pl|03887
allgo_ids GO:0000049; GO:0017101; GO:0005737; GO:0015031; GO:0006418;
allko_ids K06878;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092271.1 1 111 evalue:1.1e-49 qcov:100.00 identity:89.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF01588;
pfam_desc Putative tRNA binding domain;
pfam_id tRNA_bind;
pfam_target db:Pfam-A.hmm|PF01588.20 evalue:7.9e-14 score:50.8 best_domain_score:50.6 name:tRNA_bind;
sprot_desc Probable chaperone CsaA;
sprot_id sp|P37584|CSAA_BACSU;
sprot_target db:uniprot_sprot|sp|P37584|CSAA_BACSU 7 110 evalue:4.4e-26 qcov:93.70 identity:55.20;
tigrfam_acc TIGR02222;
tigrfam_desc export-related chaperone protein CsaA;
tigrfam_mainrole Protein fate;
tigrfam_name chap_CsaA;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02222 evalue:6e-47 score:157.2 best_domain_score:157.1 name:TIGR02222;
32755 31970 CDS
ID metaerg.pl|03888
allgo_ids GO:0016021; GO:0005887; GO:0033281; GO:0009977; GO:0065002; GO:0043953;
allko_ids K03118;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092272.1 1 261 evalue:4.0e-132 qcov:100.00 identity:96.60;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00902;
pfam_desc Sec-independent protein translocase protein (TatC);
pfam_id TatC;
pfam_target db:Pfam-A.hmm|PF00902.18 evalue:6.4e-62 score:208.3 best_domain_score:208.0 name:TatC;
sprot_desc Sec-independent protein translocase protein TatC;
sprot_id sp|P54086|TATC_SYNY3;
sprot_target db:uniprot_sprot|sp|P54086|TATC_SYNY3 11 261 evalue:4.8e-100 qcov:96.20 identity:76.10;
tigrfam_acc TIGR00945;
tigrfam_desc twin arginine-targeting protein translocase TatC;
tigrfam_mainrole Protein fate;
tigrfam_name tatC;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00945 evalue:6.9e-81 score:270.4 best_domain_score:270.2 name:TIGR00945;
tm_num 6;
32755 31970 transmembrane_helix
ID metaerg.pl|03889
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i32108-32176o32234-32302i32363-32431o32504-32572i32606-32659o32687-32746i;
35065 32870 CDS
ID metaerg.pl|03890
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092273.1 1 731 evalue:0.0e+00 qcov:100.00 identity:94.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF01464; PF13174;
pfam_desc Transglycosylase SLT domain; Tetratricopeptide repeat;
pfam_id SLT; TPR_6;
pfam_target db:Pfam-A.hmm|PF01464.20 evalue:6.5e-29 score:99.2 best_domain_score:96.5 name:SLT; db:Pfam-A.hmm|PF13174.6 evalue:3.3e-07 score:29.8 best_domain_score:11.4 name:TPR_6;
sp YES;
tm_num 1;
32870 32956 signal_peptide
ID metaerg.pl|03891
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
35065 32870 transmembrane_helix
ID metaerg.pl|03892
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i32903-32956o;
36810 35551 CDS
ID metaerg.pl|03893
allec_ids 1.14.13.-;
allgo_ids GO:0071949; GO:0016491; GO:0016709; GO:0006744;
allko_ids K03185; K03184;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195876.1 1 419 evalue:3.5e-231 qcov:100.00 identity:95.50;
kegg_pathway_id 00130;
kegg_pathway_name Ubiquinone biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id CAMALEXIN-SYN; PWY-5473; PWY-5991; PWY-5531; PWY-601; PWY-1187; PWY-5990; PWYQT-4474; M-CRESOL-DEGRADATION-PWY; PWY-5161; PWY-5992; PWY-6526; PWY-6014; PWY-681; PWYQT-4473; PWY-6059; PWY-699; PWY-5061; PWYQT-4471; PWY-6197; PWY-5183; PWY-6544; P421-PWY; PWY-5195; PWY-5469; PWY-5180; HISHP-PWY; P601-PWY; TOLUENE-DEG-2-OH-PWY; PWY-5168; PWY-5181; PWY-2821; TOLUENE-DEG-4-OH-PWY; PWY-5203; HCAMHPDEG-PWY; PWYQT-4472; PWY-5479; PWY-5701; PWY-5529; PWY-321; PWY-5773; PWY-3022; PWY-2582; PWYQT-4475; TOLUENE-DEG-3-OH-PWY;
metacyc_pathway_name camalexin biosynthesis;; hydroxycinnamic acid serotonin amides biosynthesis;; superpathway of linamarin and lotaustralin biosynthesis;; 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; glucosinolate biosynthesis from tryptophan;; glucosinolate biosynthesis from homomethionine;; lotaustralin biosynthesis;; glucosinolate biosynthesis from pentahomomethionine;; m-cresol degradation;; 6'-deoxychalcone metabolism;; thalianol and derivatives biosynthesis;; limonene degradation III (to perillate);; vernolate biosynthesis I;; dibenzothiophene desulfurization;; glucosinolate biosynthesis from tetrahomomethionine;; dimethyl sulfide degradation II (oxidation);; brassinosteroid biosynthesis I;; 6,7,4'-trihydroxyisoflavone biosynthesis;; glucosinolate biosynthesis from dihomomethionine;; chlorinated phenols degradation;; superpathway of aerobic toluene degradation;; superpathway of C28 brassinosteroid biosynthesis;; 4-nitrotoluene degradation I;; artemisinin and arteannuin B biosynthesis;; sesamin biosynthesis;; toluene degradation I (aerobic) (via o-cresol);; L-histidine degradation VI;; (+)-camphor degradation;; toluene degradation to 2-hydroxypentadienoate I (via o-cresol);; ferulate and sinapate biosynthesis;; toluene degradation III (aerobic) (via p-cresol);; glucosinolate biosynthesis from phenylalanine;; toluene degradation to 4-methylphenol;; soybean saponin I biosynthesis;; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; glucosinolate biosynthesis from trihomomethionine;; 6-methoxypodophyllotoxin biosynthesis;; shikonin biosynthesis;; superpathway of bacteriochlorophyll a biosynthesis;; cutin biosynthesis;; gossypol biosynthesis;; linamarin biosynthesis;; brassinosteroid biosynthesis II;; glucosinolate biosynthesis from hexahomomethionine;; toluene degradation to 2-hydroxypentadienoate (via 4-methylcatechol);;
metacyc_pathway_type INDOLE-PHYTOALEXIN-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; GLUCOSINOLATE-SYN;; GLUCOSINOLATE-SYN;; CYANOGENIC-GLUCOSIDE-SYN;; GLUCOSINOLATE-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;; CHALCONE-SYN;; TRITERPENOID-SYN;; Limonene-Degradation;; Vernolate-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; GLUCOSINOLATE-SYN;; Dimethylsulfide-Degradation;; Brassinosteroid-Biosynthesis;; ISOFLAVONOID-SYN;; GLUCOSINOLATE-SYN;; Chloroaromatic-Compounds-Degradation;; Super-Pathways; TOLUENE-DEG;; Super-Pathways;; 4-Nitrotoluene-Degradation;; SESQUITERPENE-LACTONE;; LIGNAN-SYN;; Super-Pathways; TOLUENE-DEG;; HISTIDINE-DEG;; Camphor-Degradation;; TOLUENE-DEG;; CINNAMATE-SYN;; Super-Pathways; TOLUENE-DEG;; GLUCOSINOLATE-SYN;; TOLUENE-DEG;; TRITERPENOID-SYN;; Phenolic-Compounds-Degradation;; GLUCOSINOLATE-SYN;; LIGNAN-SYN;; QUINONE-SYN;; Chlorophyll-a-Biosynthesis; Super-Pathways;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; SESQUITERPENOID-SYN;; CYANOGENIC-GLUCOSIDE-SYN;; Brassinosteroid-Biosynthesis;; GLUCOSINOLATE-SYN;; TOLUENE-DEG;;
pfam_acc PF01494; PF05834; PF13450; PF07992; PF08491;
pfam_desc FAD binding domain; Lycopene cyclase protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Squalene epoxidase;
pfam_id FAD_binding_3; Lycopene_cycl; NAD_binding_8; Pyr_redox_2; SE;
pfam_target db:Pfam-A.hmm|PF01494.19 evalue:2.6e-30 score:105.1 best_domain_score:103.5 name:FAD_binding_3; db:Pfam-A.hmm|PF05834.12 evalue:8.5e-06 score:24.3 best_domain_score:14.2 name:Lycopene_cycl; db:Pfam-A.hmm|PF13450.6 evalue:6.7e-05 score:22.3 best_domain_score:21.2 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:9.8e-08 score:30.8 best_domain_score:20.4 name:Pyr_redox_2; db:Pfam-A.hmm|PF08491.10 evalue:0.00011 score:20.6 best_domain_score:19.6 name:SE;
sprot_desc hypothetical protein;
sprot_id sp|P72835|Y1300_SYNY3;
sprot_target db:uniprot_sprot|sp|P72835|Y1300_SYNY3 24 417 evalue:3.6e-113 qcov:94.00 identity:50.80;
tigrfam_acc TIGR01988;
tigrfam_desc ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name Ubi-OHases;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR01988 evalue:8.1e-133 score:442.1 best_domain_score:442.0 name:TIGR01988;
36933 38504 CDS
ID metaerg.pl|03894
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195877.1 1 523 evalue:2.2e-299 qcov:100.00 identity:93.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:5.8e-10 score:39.2 best_domain_score:30.3 name:Metallophos;
38580 39305 CDS
ID metaerg.pl|03895
allgo_ids GO:0008168;
allko_ids K03183; K00599;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195878.1 1 240 evalue:2.9e-121 qcov:99.60 identity:94.60;
kegg_pathway_id 00350; 00130; 00380; 00340; 00150; 00450; 00626;
kegg_pathway_name Tyrosine metabolism; Ubiquinone biosynthesis; Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism; Selenoamino acid metabolism; Naphthalene and anthracene degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF07091; PF08241; PF08242; PF13489; PF13649; PF13847; PF02475; PF05175; PF01135; PF01209;
pfam_desc Ribosomal RNA methyltransferase (FmrO); Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Met-10+ like-protein; Methyltransferase small domain; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); ubiE/COQ5 methyltransferase family;
pfam_id FmrO; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; Met_10; MTS; PCMT; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF07091.11 evalue:7.7e-05 score:21.6 best_domain_score:21.3 name:FmrO; db:Pfam-A.hmm|PF08241.12 evalue:6.6e-14 score:51.6 best_domain_score:50.9 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:2.2e-14 score:53.2 best_domain_score:52.6 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:1.6e-09 score:37.0 best_domain_score:36.5 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1e-13 score:51.1 best_domain_score:50.3 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.3e-15 score:56.8 best_domain_score:56.3 name:Methyltransf_31; db:Pfam-A.hmm|PF02475.16 evalue:0.00013 score:21.1 best_domain_score:20.7 name:Met_10; db:Pfam-A.hmm|PF05175.14 evalue:6.5e-06 score:25.0 best_domain_score:24.3 name:MTS; db:Pfam-A.hmm|PF01135.19 evalue:7.5e-05 score:21.8 best_domain_score:20.1 name:PCMT; db:Pfam-A.hmm|PF01209.18 evalue:4.1e-07 score:28.8 best_domain_score:28.4 name:Ubie_methyltran;
sp YES;
tm_num 1;
38580 38648 signal_peptide
ID metaerg.pl|03896
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
38580 39305 transmembrane_helix
ID metaerg.pl|03897
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology o38589-38657i;
39690 39415 CDS
ID metaerg.pl|03898
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195880.1 1 91 evalue:7.8e-43 qcov:100.00 identity:91.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
42999 39829 CDS
ID metaerg.pl|03899
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0015562; GO:0006855; GO:0046677;
allko_ids K18138;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093102.1 1 1045 evalue:0.0e+00 qcov:99.00 identity:94.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00873; PF03176;
pfam_desc AcrB/AcrD/AcrF family; MMPL family;
pfam_id ACR_tran; MMPL;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:0 score:1214.6 best_domain_score:1214.4 name:ACR_tran; db:Pfam-A.hmm|PF03176.15 evalue:3.2e-14 score:51.8 best_domain_score:33.3 name:MMPL;
sprot_desc Efflux pump membrane transporter BepE;
sprot_id sp|Q8G2M6|BEPE_BRUSU;
sprot_target db:uniprot_sprot|sp|Q8G2M6|BEPE_BRUSU 5 1027 evalue:6.7e-233 qcov:96.90 identity:44.20;
tigrfam_acc TIGR00915;
tigrfam_desc RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 2A0602;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR00915 evalue:0 score:1391.5 best_domain_score:1391.2 name:TIGR00915;
tm_num 12;
42999 39829 transmembrane_helix
ID metaerg.pl|03900
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i39862-39930o40843-40911i40930-40998o41011-41073i41146-41214o41257-41325i41449-41517o42433-42501i42520-42573o42601-42669i42730-42798o42841-42909i;
44824 43268 CDS
ID metaerg.pl|03901
allko_ids K00658;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093101.1 1 518 evalue:3.6e-249 qcov:100.00 identity:89.40;
kegg_pathway_id 00020; 00310;
kegg_pathway_name Citrate cycle (TCA cycle); Lysine degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00364; PF13533; PF12700; PF13437; PF16576;
pfam_desc Biotin-requiring enzyme; Biotin-lipoyl like; HlyD family secretion protein; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl; Biotin_lipoyl_2; HlyD_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:1.3e-06 score:27.4 best_domain_score:16.9 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:4.9e-16 score:57.5 best_domain_score:54.6 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF12700.7 evalue:5.2e-07 score:28.0 best_domain_score:15.7 name:HlyD_2; db:Pfam-A.hmm|PF13437.6 evalue:7.2e-17 score:61.3 best_domain_score:48.9 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:2.4e-14 score:52.3 best_domain_score:36.2 name:HlyD_D23;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:2.2e-60 score:203.4 best_domain_score:132.6 name:TIGR01730;
tm_num 1;
44824 43268 transmembrane_helix
ID metaerg.pl|03902
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i43370-43429o;
45379 45966 CDS
ID metaerg.pl|03903
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp002896875;
genomedb_acc GCF_002896875.1;
genomedb_target db:genomedb|GCF_002896875.1|WP_103136019.1 1 194 evalue:3.5e-88 qcov:99.50 identity:83.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF16925; PF08359; PF13977; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; YsiA-like protein, C-terminal region; BetI-type transcriptional repressor, C-terminal; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_13; TetR_C_4; TetR_C_6; TetR_N;
pfam_target db:Pfam-A.hmm|PF16925.5 evalue:8.3e-08 score:31.4 best_domain_score:30.7 name:TetR_C_13; db:Pfam-A.hmm|PF08359.11 evalue:1e-05 score:24.9 best_domain_score:24.4 name:TetR_C_4; db:Pfam-A.hmm|PF13977.6 evalue:7.3e-08 score:31.9 best_domain_score:30.8 name:TetR_C_6; db:Pfam-A.hmm|PF00440.23 evalue:3e-14 score:51.8 best_domain_score:51.1 name:TetR_N;
sprot_desc Uncharacterized HTH-type transcriptional regulator pXO2-48/BXB0055/GBAA_pXO2_0055;
sprot_id sp|Q9RMY4|Y6555_BACAN;
sprot_target db:uniprot_sprot|sp|Q9RMY4|Y6555_BACAN 1 194 evalue:1.2e-34 qcov:99.50 identity:36.60;
46040 46483 CDS
ID metaerg.pl|03904
allgo_ids GO:0006633; GO:0016790;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Cylindrospermum;s__Cylindrospermum stagnale;
genomedb_acc GCF_000317535.1;
genomedb_target db:genomedb|GCF_000317535.1|WP_015210043.1 1 143 evalue:1.4e-54 qcov:97.30 identity:73.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF03061; PF13279; PF01643;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily; Acyl-ACP thioesterase;
pfam_id 4HBT; 4HBT_2; Acyl-ACP_TE;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:2.8e-07 score:30.0 best_domain_score:29.4 name:4HBT; db:Pfam-A.hmm|PF13279.6 evalue:2.2e-14 score:53.3 best_domain_score:53.0 name:4HBT_2; db:Pfam-A.hmm|PF01643.17 evalue:4.7e-08 score:31.9 best_domain_score:17.7 name:Acyl-ACP_TE;
47394 46600 CDS
ID metaerg.pl|03905
allec_ids 3.1.2.6;
allgo_ids GO:0004416; GO:0046872; GO:0019243;
allko_ids K01069; K01180; K01011;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195884.1 8 264 evalue:5.6e-134 qcov:97.30 identity:91.10;
kegg_pathway_id 00620; 00272;
kegg_pathway_name Pyruvate metabolism; Cysteine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PWY-5386; METHGLYUT-PWY;
metacyc_pathway_name methylglyoxal degradation I;; superpathway of methylglyoxal degradation;;
metacyc_pathway_type Methylglyoxal-Detoxification;; Aldehyde-Degradation; Super-Pathways;;
pfam_acc PF16123; PF00753;
pfam_desc Hydroxyacylglutathione hydrolase C-terminus; Metallo-beta-lactamase superfamily;
pfam_id HAGH_C; Lactamase_B;
pfam_target db:Pfam-A.hmm|PF16123.5 evalue:7.7e-26 score:89.7 best_domain_score:88.7 name:HAGH_C; db:Pfam-A.hmm|PF00753.27 evalue:2.8e-14 score:52.8 best_domain_score:51.7 name:Lactamase_B;
sprot_desc Hydroxyacylglutathione hydrolase;
sprot_id sp|Q3MGD2|GLO2_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MGD2|GLO2_ANAVT 8 264 evalue:5.3e-123 qcov:97.30 identity:81.70;
tigrfam_acc TIGR03413;
tigrfam_desc hydroxyacylglutathione hydrolase;
tigrfam_mainrole Cellular processes;
tigrfam_name GSH_gloB;
tigrfam_sub1role Detoxification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03413 evalue:5.3e-97 score:323.2 best_domain_score:323.0 name:TIGR03413;
47737 48942 CDS
ID metaerg.pl|03906
allko_ids K00749; K13677; K02844;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092259.1 1 399 evalue:1.5e-223 qcov:99.50 identity:95.20;
kegg_pathway_id 01031; 00540;
kegg_pathway_name Glycan structures - biosynthesis 2; Lipopolysaccharide biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00534; PF13524; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyl transferases group 1; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_trans_1_2; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:1e-19 score:70.0 best_domain_score:69.3 name:Glycos_transf_1; db:Pfam-A.hmm|PF13524.6 evalue:4.1e-06 score:26.3 best_domain_score:25.2 name:Glyco_trans_1_2; db:Pfam-A.hmm|PF13692.6 evalue:1.7e-22 score:79.5 best_domain_score:75.8 name:Glyco_trans_1_4;
49033 51276 CDS
ID metaerg.pl|03907
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887; GO:0043158;
allko_ids K02052; K02006; K05847; K02017; K06861; K02071; K01996; K02045; K10111; K01995; K02023; K02000; K06147;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092258.1 1 747 evalue:0.0e+00 qcov:100.00 identity:84.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:4.5e-25 score:88.1 best_domain_score:87.5 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:3.2e-34 score:117.6 best_domain_score:116.0 name:ABC_tran;
sprot_desc Heterocyst differentiation ATP-binding protein HepA;
sprot_id sp|P22638|HEPA_NOSS1;
sprot_target db:uniprot_sprot|sp|P22638|HEPA_NOSS1 5 592 evalue:7.8e-95 qcov:78.70 identity:36.20;
tm_num 5;
49033 51276 transmembrane_helix
ID metaerg.pl|03908
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i49090-49158o49261-49329i49477-49545o49555-49623i49897-49965o;
51377 52492 CDS
ID metaerg.pl|03909
allko_ids K13657; K03844;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092257.1 1 371 evalue:7.6e-185 qcov:100.00 identity:84.10;
kegg_pathway_id 01030; 00510;
kegg_pathway_name Glycan structures - biosynthesis 1; N-Glycan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00534; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:4.3e-13 score:48.4 best_domain_score:47.4 name:Glycos_transf_1; db:Pfam-A.hmm|PF13692.6 evalue:2.3e-06 score:27.3 best_domain_score:26.4 name:Glyco_trans_1_4;
tm_num 1;
51377 52492 transmembrane_helix
ID metaerg.pl|03910
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i51395-51454o;
52569 53441 CDS
ID metaerg.pl|03911
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092256.1 1 290 evalue:8.3e-147 qcov:100.00 identity:86.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF04230;
pfam_desc Polysaccharide pyruvyl transferase;
pfam_id PS_pyruv_trans;
pfam_target db:Pfam-A.hmm|PF04230.13 evalue:2.5e-07 score:30.2 best_domain_score:19.7 name:PS_pyruv_trans;
53832 54059 CDS
ID metaerg.pl|03912
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp002949795;
genomedb_acc GCF_002949795.1;
genomedb_target db:genomedb|GCF_002949795.1|WP_104906059.1 1 74 evalue:6.1e-33 qcov:98.70 identity:91.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
54064 55077 CDS
ID metaerg.pl|03913
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__NIES-4103;s__NIES-4103 sp002368335;
genomedb_acc GCF_002368335.1;
genomedb_target db:genomedb|GCF_002368335.1|WP_096559162.1 1 333 evalue:6.0e-165 qcov:98.80 identity:82.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
55079 56020 CDS
ID metaerg.pl|03914
allgo_ids GO:0006486; GO:0016757;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195890.1 1 313 evalue:3.4e-170 qcov:100.00 identity:90.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF11051;
pfam_desc Mannosyltransferase putative;
pfam_id Mannosyl_trans3;
pfam_target db:Pfam-A.hmm|PF11051.8 evalue:7.4e-07 score:28.0 best_domain_score:27.1 name:Mannosyl_trans3;
56231 56773 CDS
ID metaerg.pl|03915
allgo_ids GO:0005840; GO:0019843; GO:0003735; GO:0006412;
allko_ids K02939;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093998.1 29 180 evalue:1.4e-72 qcov:84.40 identity:98.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF03948; PF01281;
pfam_desc Ribosomal protein L9, C-terminal domain; Ribosomal protein L9, N-terminal domain;
pfam_id Ribosomal_L9_C; Ribosomal_L9_N;
pfam_target db:Pfam-A.hmm|PF03948.14 evalue:1.7e-23 score:82.1 best_domain_score:82.1 name:Ribosomal_L9_C; db:Pfam-A.hmm|PF01281.19 evalue:1.3e-20 score:71.9 best_domain_score:71.0 name:Ribosomal_L9_N;
sprot_desc 50S ribosomal protein L9;
sprot_id sp|B2IVH8|RL9_NOSP7;
sprot_target db:uniprot_sprot|sp|B2IVH8|RL9_NOSP7 29 180 evalue:1.8e-53 qcov:84.40 identity:86.80;
tigrfam_acc TIGR00158;
tigrfam_desc ribosomal protein bL9;
tigrfam_mainrole Protein synthesis;
tigrfam_name L9;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00158 evalue:1.1e-43 score:148.4 best_domain_score:148.0 name:TIGR00158;
56849 58204 CDS
ID metaerg.pl|03916
allec_ids 3.6.4.12;
allgo_ids GO:0003678; GO:0005524; GO:0006260; GO:1990077; GO:0003677; GO:0004519; GO:0006269; GO:0016539; GO:0006314;
allko_ids K02314;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092252.1 1 451 evalue:1.4e-249 qcov:100.00 identity:98.00;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF13481; PF06745; PF00772; PF03796;
pfam_desc AAA domain; KaiC; DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain;
pfam_id AAA_25; ATPase; DnaB; DnaB_C;
pfam_target db:Pfam-A.hmm|PF13481.6 evalue:5e-15 score:54.8 best_domain_score:54.0 name:AAA_25; db:Pfam-A.hmm|PF06745.13 evalue:3.3e-07 score:29.1 best_domain_score:28.0 name:ATPase; db:Pfam-A.hmm|PF00772.21 evalue:8e-27 score:92.6 best_domain_score:91.8 name:DnaB; db:Pfam-A.hmm|PF03796.15 evalue:1.2e-118 score:394.3 best_domain_score:393.9 name:DnaB_C;
sprot_desc Replicative DNA helicase;
sprot_id sp|Q8YZA1|DNAB_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YZA1|DNAB_NOSS1 1 394 evalue:1.1e-197 qcov:87.40 identity:89.30;
tigrfam_acc TIGR00665;
tigrfam_desc replicative DNA helicase;
tigrfam_mainrole DNA metabolism;
tigrfam_name DnaB;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00665 evalue:1.1e-212 score:705.7 best_domain_score:705.5 name:TIGR00665;
58925 58434 CDS
ID metaerg.pl|03917
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093996.1 1 163 evalue:2.1e-78 qcov:100.00 identity:96.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00254;
pfam_desc FKBP-type peptidyl-prolyl cis-trans isomerase;
pfam_id FKBP_C;
pfam_target db:Pfam-A.hmm|PF00254.28 evalue:9.3e-38 score:127.7 best_domain_score:126.7 name:FKBP_C;
sp YES;
58434 58499 signal_peptide
ID metaerg.pl|03918
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
59361 59038 CDS
ID metaerg.pl|03919
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092251.1 1 107 evalue:3.0e-49 qcov:100.00 identity:98.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF05597;
pfam_desc Poly(hydroxyalcanoate) granule associated protein (phasin);
pfam_id Phasin;
pfam_target db:Pfam-A.hmm|PF05597.11 evalue:1.4e-08 score:34.1 best_domain_score:30.5 name:Phasin;
59503 59811 CDS
ID metaerg.pl|03920
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195897.1 1 102 evalue:3.8e-46 qcov:100.00 identity:89.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF03992;
pfam_desc Antibiotic biosynthesis monooxygenase;
pfam_id ABM;
pfam_target db:Pfam-A.hmm|PF03992.16 evalue:6.4e-08 score:31.8 best_domain_score:31.1 name:ABM;
tigrfam_acc TIGR03792;
tigrfam_desc uncharacterized cyanobacterial protein, TIGR03792 family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR03792;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR03792 evalue:3e-35 score:119.1 best_domain_score:118.9 name:TIGR03792;
59995 61053 CDS
ID metaerg.pl|03921
allec_ids 2.1.1.192;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0070040; GO:0019843; GO:0002935; GO:0000049; GO:0070475;
allko_ids K06941;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092249.1 1 352 evalue:9.3e-193 qcov:100.00 identity:95.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF13394; PF04055;
pfam_desc 4Fe-4S single cluster domain; Radical SAM superfamily;
pfam_id Fer4_14; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF13394.6 evalue:2.4e-05 score:23.7 best_domain_score:22.6 name:Fer4_14; db:Pfam-A.hmm|PF04055.21 evalue:2e-17 score:63.3 best_domain_score:62.5 name:Radical_SAM;
sprot_desc Probable dual-specificity RNA methyltransferase RlmN;
sprot_id sp|B2J6D0|RLMN_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J6D0|RLMN_NOSP7 1 352 evalue:2.9e-172 qcov:100.00 identity:82.60;
tigrfam_acc TIGR00048;
tigrfam_desc 23S rRNA (adenine(2503)-C(2))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name rRNA_mod_RlmN;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00048 evalue:1.1e-136 score:454.6 best_domain_score:454.4 name:TIGR00048;
61297 61097 CDS
ID metaerg.pl|03922
allko_ids K00205;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092248.1 1 65 evalue:3.0e-28 qcov:98.50 identity:92.30;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
63602 61725 CDS
ID metaerg.pl|03923
allec_ids 3.1.25.-;
allgo_ids GO:0005515; GO:0005737; GO:0009380; GO:0003677; GO:0009381; GO:0006289; GO:0009432;
allko_ids K03703;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092247.1 1 624 evalue:0.0e+00 qcov:99.80 identity:93.80;
kegg_pathway_id 03420;
kegg_pathway_name Nucleotide excision repair;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF01541; PF12826; PF14520; PF02151; PF08459;
pfam_desc GIY-YIG catalytic domain; Helix-hairpin-helix motif; Helix-hairpin-helix domain; UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal;
pfam_id GIY-YIG; HHH_2; HHH_5; UVR; UvrC_HhH_N;
pfam_target db:Pfam-A.hmm|PF01541.24 evalue:4.2e-10 score:39.0 best_domain_score:37.8 name:GIY-YIG; db:Pfam-A.hmm|PF12826.7 evalue:3e-10 score:39.3 best_domain_score:38.0 name:HHH_2; db:Pfam-A.hmm|PF14520.6 evalue:1.2e-08 score:34.6 best_domain_score:33.3 name:HHH_5; db:Pfam-A.hmm|PF02151.19 evalue:1.2e-10 score:40.0 best_domain_score:38.7 name:UVR; db:Pfam-A.hmm|PF08459.11 evalue:4.7e-47 score:159.0 best_domain_score:157.6 name:UvrC_HhH_N;
sprot_desc UvrABC system protein C;
sprot_id sp|Q3M542|UVRC_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M542|UVRC_ANAVT 1 624 evalue:0.0e+00 qcov:99.80 identity:89.90;
tigrfam_acc TIGR00194;
tigrfam_desc excinuclease ABC subunit C;
tigrfam_mainrole DNA metabolism;
tigrfam_name uvrC;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00194 evalue:5.9e-203 score:674.8 best_domain_score:673.8 name:TIGR00194;
64970 63795 CDS
ID metaerg.pl|03924
allec_ids 2.6.1.83;
allgo_ids GO:0009058; GO:0030170; GO:0010285; GO:0033362;
allko_ids K00837; K00825; K14261; K10907; K00821; K10206;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092244.1 1 391 evalue:1.5e-215 qcov:100.00 identity:95.40;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PWY-724; PWY-5097;
metacyc_pathway_name superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-lysine biosynthesis VI;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:7.4e-52 score:175.9 best_domain_score:175.7 name:Aminotran_1_2;
sprot_desc LL-diaminopimelate aminotransferase;
sprot_id sp|Q3Z8H5|DAPAT_DEHM1;
sprot_target db:uniprot_sprot|sp|Q3Z8H5|DAPAT_DEHM1 1 390 evalue:1.7e-88 qcov:99.70 identity:42.30;
65343 65008 CDS
ID metaerg.pl|03925
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005623; GO:0015035; GO:0045454; GO:0006662;
allko_ids K03671;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092242.1 1 111 evalue:4.1e-54 qcov:100.00 identity:96.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00578; PF00085; PF13098; PF13905; PF13728;
pfam_desc AhpC/TSA family; Thioredoxin; Thioredoxin-like domain; Thioredoxin-like; F plasmid transfer operon protein;
pfam_id AhpC-TSA; Thioredoxin; Thioredoxin_2; Thioredoxin_8; TraF;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:5.9e-05 score:22.2 best_domain_score:22.1 name:AhpC-TSA; db:Pfam-A.hmm|PF00085.20 evalue:9.3e-29 score:98.7 best_domain_score:98.5 name:Thioredoxin; db:Pfam-A.hmm|PF13098.6 evalue:7.2e-07 score:28.9 best_domain_score:26.5 name:Thioredoxin_2; db:Pfam-A.hmm|PF13905.6 evalue:4.1e-08 score:32.7 best_domain_score:30.6 name:Thioredoxin_8; db:Pfam-A.hmm|PF13728.6 evalue:1.6e-05 score:24.1 best_domain_score:23.8 name:TraF;
sprot_desc Thioredoxin 2;
sprot_id sp|P20857|THIO2_NOSS1;
sprot_target db:uniprot_sprot|sp|P20857|THIO2_NOSS1 1 111 evalue:1.1e-48 qcov:100.00 identity:82.00;
66432 65650 CDS
ID metaerg.pl|03926
allko_ids K03969;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092241.1 1 260 evalue:3.6e-125 qcov:100.00 identity:97.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF04012;
pfam_desc PspA/IM30 family;
pfam_id PspA_IM30;
pfam_target db:Pfam-A.hmm|PF04012.12 evalue:2e-59 score:200.1 best_domain_score:200.1 name:PspA_IM30;
sprot_desc hypothetical protein;
sprot_id sp|Q55707|Y617_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55707|Y617_SYNY3 1 195 evalue:3.1e-46 qcov:75.00 identity:54.40;
67302 66595 CDS
ID metaerg.pl|03927
allgo_ids GO:0009706; GO:0009535; GO:0016032;
allko_ids K03969;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092240.1 1 235 evalue:2.4e-104 qcov:100.00 identity:91.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF04012;
pfam_desc PspA/IM30 family;
pfam_id PspA_IM30;
pfam_target db:Pfam-A.hmm|PF04012.12 evalue:2e-51 score:173.9 best_domain_score:173.7 name:PspA_IM30;
sprot_desc Probable membrane-associated 30 kDa protein, chloroplastic;
sprot_id sp|Q8S0J7|IM30_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q8S0J7|IM30_ORYSJ 4 217 evalue:4.0e-45 qcov:91.10 identity:48.10;
68648 67488 CDS
ID metaerg.pl|03928
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092239.1 2 386 evalue:5.0e-155 qcov:99.70 identity:76.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
68761 69303 CDS
ID metaerg.pl|03929
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092238.1 1 180 evalue:7.3e-93 qcov:100.00 identity:93.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF05258;
pfam_desc Dna[CI] antecedent, DciA;
pfam_id DciA;
pfam_target db:Pfam-A.hmm|PF05258.12 evalue:5.6e-20 score:70.8 best_domain_score:70.1 name:DciA;
69753 70067 CDS
ID metaerg.pl|03930
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195910.1 1 104 evalue:1.1e-40 qcov:100.00 identity:82.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
71015 70182 CDS
ID metaerg.pl|03931
allec_ids 4.1.3.36;
allgo_ids GO:0003824; GO:0005829; GO:0008935; GO:0071890; GO:0009234;
allko_ids K07514; K07515; K01825; K10527; K01782; K07516; K00022; K01692; K13767; K15016; K01661;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092236.1 1 277 evalue:3.9e-154 qcov:100.00 identity:95.70;
kegg_pathway_id 00071; 00130; 00410; 00592; 00650; 00640; 00062; 00903; 01040; 00632; 00930; 00380; 00310; 00281; 00280;
kegg_pathway_name Fatty acid metabolism; Ubiquinone biosynthesis; beta-Alanine metabolism; alpha-Linolenic acid metabolism; Butanoate metabolism; Propanoate metabolism; Fatty acid elongation in mitochondria; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PWY-5837; ALL-CHORISMATE-PWY; PWY-5897; PWY-5840; PWY-5863; PWY-5899; PWY-5850; PWY-5898; PWY-5861; PWY-5838; PWY-5791; PWY-5860; PWY-5862; PWY-5845; PWY-5896;
metacyc_pathway_name 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of chorismate metabolism;; superpathway of menaquinol-11 biosynthesis;; superpathway of menaquinol-7 biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-12 biosynthesis;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-8 biosynthesis I;; ; superpathway of demethylmenaquinol-6 biosynthesis I;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;;
metacyc_pathway_type DHNA-Biosynthesis;; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; ; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:1e-73 score:247.0 best_domain_score:246.7 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:2.7e-16 score:59.2 best_domain_score:58.8 name:ECH_2;
sprot_desc 1,4-dihydroxy-2-naphthoyl-CoA synthase;
sprot_id sp|P23966|MENB_BACSU;
sprot_target db:uniprot_sprot|sp|P23966|MENB_BACSU 5 277 evalue:8.7e-108 qcov:98.60 identity:67.80;
tigrfam_acc TIGR01929;
tigrfam_desc naphthoate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name menB;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR01929 evalue:1.1e-133 score:443.7 best_domain_score:443.6 name:TIGR01929;
73204 71141 CDS
ID metaerg.pl|03932
allgo_ids GO:0019867; GO:0009507; GO:0009941; GO:0009707; GO:0016020; GO:0005739; GO:0009536; GO:0009658; GO:0009793;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092234.1 1 687 evalue:0.0e+00 qcov:100.00 identity:88.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF01103; PF07244; PF08479;
pfam_desc Surface antigen; Surface antigen variable number repeat; POTRA domain, ShlB-type;
pfam_id Bac_surface_Ag; POTRA; POTRA_2;
pfam_target db:Pfam-A.hmm|PF01103.23 evalue:3.4e-57 score:193.6 best_domain_score:193.1 name:Bac_surface_Ag; db:Pfam-A.hmm|PF07244.15 evalue:4.6e-21 score:74.4 best_domain_score:33.3 name:POTRA; db:Pfam-A.hmm|PF08479.11 evalue:2.1e-09 score:36.3 best_domain_score:34.2 name:POTRA_2;
sp YES;
sprot_desc Outer envelope protein 80, chloroplastic;
sprot_id sp|Q9C5J8|OEP80_ARATH;
sprot_target db:uniprot_sprot|sp|Q9C5J8|OEP80_ARATH 147 686 evalue:3.4e-68 qcov:78.60 identity:31.40;
71141 71215 signal_peptide
ID metaerg.pl|03933
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
73376 74728 CDS
ID metaerg.pl|03934
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092233.1 1 449 evalue:3.2e-230 qcov:99.80 identity:89.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
tigrfam_acc TIGR03492;
tigrfam_desc conserved hypothetical protein;
tigrfam_name TIGR03492;
tigrfam_target db:TIGRFAMs.hmm|TIGR03492 evalue:3.4e-149 score:496.0 best_domain_score:495.8 name:TIGR03492;
75509 74760 CDS
ID metaerg.pl|03935
allgo_ids GO:0006355; GO:0005737; GO:0003677; GO:0000160;
allko_ids K07648; K02478; K07778; K07652; K07673; K07641; K07646; K03407; K07682; K07654; K11231; K08282; K07704; K07677; K02484; K07642; K10715; K07678; K07636; K07653; K02480; K02482; K07710; K07716; K02489; K08479; K03388; K02668; K07675; K07647; K11357; K04757; K12767; K02486; K07644; K06379; K07676; K10681; K11618;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093994.1 10 249 evalue:9.4e-123 qcov:96.40 identity:96.70;
kegg_pathway_id 00790; 03090; 02020; 04011;
kegg_pathway_name Folate biosynthesis; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00196; PF13412; PF00072; PF08281;
pfam_desc Bacterial regulatory proteins, luxR family; Winged helix-turn-helix DNA-binding; Response regulator receiver domain; Sigma-70, region 4;
pfam_id GerE; HTH_24; Response_reg; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:4.9e-18 score:63.7 best_domain_score:61.8 name:GerE; db:Pfam-A.hmm|PF13412.6 evalue:1.3e-05 score:23.9 best_domain_score:22.5 name:HTH_24; db:Pfam-A.hmm|PF00072.24 evalue:5.5e-24 score:83.7 best_domain_score:82.7 name:Response_reg; db:Pfam-A.hmm|PF08281.12 evalue:2e-06 score:26.6 best_domain_score:25.3 name:Sigma70_r4_2;
sprot_desc Transcriptional regulatory protein LiaR;
sprot_id sp|O32197|LIAR_BACSU;
sprot_target db:uniprot_sprot|sp|O32197|LIAR_BACSU 13 248 evalue:7.5e-34 qcov:94.80 identity:37.70;
76597 77931 CDS
ID metaerg.pl|03936
allgo_ids GO:0000155; GO:0007165;
allko_ids K12767; K13761; K02486; K11383; K14509; K07769; K11520; K04757; K11629; K10125; K11357; K07680; K07647; K13040; K10942; K07675; K07717; K01769; K07650; K06379; K07676; K10681; K07709; K13532; K07644; K02482; K08801; K14489; K02480; K07653; K07638; K07636; K02030; K11527; K13587; K10715; K07678; K02668; K03388; K08479; K07674; K10916; K02489; K07697; K07716; K07710; K07640; K07656; K01768; K07677; K07708; K07645; K07704; K10909; K01937; K08282; K07643; K11231; K02491; K13490; K11711; K07642; K00760; K02484; K11356; K11640; K07778; K11354; K07683; K07768; K02575; K11633; K07711; K00873; K08884; K13533; K11328; K07679; K02478; K07648; K07651; K07718; K07698; K07654; K00936; K07682; K07649; K07777; K03407; K07637; K07641; K13598; K07646; K07639; K08475; K01120; K07673; K07652;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092232.1 1 444 evalue:2.4e-225 qcov:100.00 identity:92.80;
kegg_pathway_id 00790; 04011; 02020; 03090; 00620; 05111; 00230; 00240; 00010; 00710; 00983;
kegg_pathway_name Folate biosynthesis; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Drug metabolism - other enzymes;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF02518; PF00512; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:7.4e-29 score:99.8 best_domain_score:99.0 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.2e-17 score:63.0 best_domain_score:61.9 name:HisKA; db:Pfam-A.hmm|PF00072.24 evalue:1.1e-22 score:79.5 best_domain_score:78.4 name:Response_reg;
77960 79096 CDS
ID metaerg.pl|03937
allgo_ids GO:0000155; GO:0007165;
allko_ids K07650; K10681; K07676; K06379; K01769; K07644; K13532; K07709; K04757; K11617; K11357; K02476; K10125; K11629; K02486; K13761; K11383; K12767; K14509; K07769; K11520; K07717; K07675; K07647; K13040; K10942; K07674; K08479; K10916; K02668; K03388; K07710; K07640; K01768; K07656; K07697; K02489; K07716; K07653; K07638; K07636; K14489; K02482; K08801; K02480; K07678; K10715; K13587; K02030; K11527; K07642; K11711; K11356; K11640; K00760; K02484; K07704; K10909; K08282; K01937; K07708; K07645; K07677; K13490; K02491; K11231; K07643; K03407; K07637; K07654; K07777; K07682; K00936; K07649; K07652; K07646; K13598; K07641; K01120; K07673; K08475; K07639; K08884; K07711; K00873; K11328; K13533; K07683; K11354; K07778; K11633; K07768; K11623; K07651; K07698; K07718; K02478; K07679; K07648;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092231.1 1 378 evalue:2.1e-198 qcov:100.00 identity:95.50;
kegg_pathway_id 03090; 00620; 04011; 02020; 00790; 00983; 00010; 00710; 00240; 00230; 05111;
kegg_pathway_name Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Folate biosynthesis; Drug metabolism - other enzymes; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF02518; PF00512; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:5.4e-26 score:90.5 best_domain_score:89.9 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.9e-08 score:33.4 best_domain_score:32.4 name:HisKA; db:Pfam-A.hmm|PF00072.24 evalue:3.6e-30 score:103.6 best_domain_score:102.6 name:Response_reg;
79595 79143 CDS
ID metaerg.pl|03938
allgo_ids GO:0000160; GO:0005829; GO:0032993; GO:0001216; GO:0003700; GO:0000156; GO:0000976; GO:0010106;
allko_ids K07651; K07679; K02478; K07648; K00873; K07778; K11354; K07768; K07652; K07641; K07646; K08475; K07639; K07673; K01120; K03407; K07637; K07654; K00936; K07682; K11231; K07704; K10909; K01937; K08282; K07677; K07708; K11356; K11640; K02484; K07642; K11711; K10715; K07678; K11527; K07653; K07636; K02482; K02480; K07710; K02489; K07716; K08479; K10916; K02668; K03388; K07675; K07717; K07647; K04757; K10125; K11357; K12767; K02486; K13761; K11383; K07644; K07709; K06379; K07676; K10681; K02483;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092230.1 1 150 evalue:5.8e-75 qcov:100.00 identity:94.00;
kegg_pathway_id 04011; 02020; 03090; 00620; 00790; 00710; 00010; 05111; 00230; 00240;
kegg_pathway_name MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism; Folate biosynthesis; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:4.9e-21 score:74.2 best_domain_score:74.0 name:Response_reg;
sprot_desc Probable transcriptional regulatory protein TcrX;
sprot_id sp|O69730|TCRX_MYCTU;
sprot_target db:uniprot_sprot|sp|O69730|TCRX_MYCTU 12 137 evalue:2.2e-17 qcov:84.00 identity:35.70;
80378 81580 CDS
ID metaerg.pl|03939
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp002949795;
genomedb_acc GCF_002949795.1;
genomedb_target db:genomedb|GCF_002949795.1|WP_104906241.1 1 400 evalue:6.0e-204 qcov:100.00 identity:86.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00004;
pfam_desc ATPase family associated with various cellular activities (AAA);
pfam_id AAA;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1e-12 score:47.9 best_domain_score:43.1 name:AAA;
81806 83113 CDS
ID metaerg.pl|03940
allgo_ids GO:0003333; GO:0005887; GO:0005886; GO:0015173;
allko_ids K03834;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093993.1 11 435 evalue:1.3e-215 qcov:97.70 identity:93.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF03222;
pfam_desc Tryptophan/tyrosine permease family;
pfam_id Trp_Tyr_perm;
pfam_target db:Pfam-A.hmm|PF03222.13 evalue:1.1e-76 score:257.7 best_domain_score:257.5 name:Trp_Tyr_perm;
sprot_desc Tyrosine-specific transport protein;
sprot_id sp|P0AAD4|TYRP_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AAD4|TYRP_ECOLI 38 434 evalue:1.6e-36 qcov:91.30 identity:31.60;
tm_num 11;
81806 83113 transmembrane_helix
ID metaerg.pl|03941
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i81911-81979o82007-82075i82142-82210o82268-82336i82355-82420o82463-82531i82568-82636o82709-82777i82838-82906o82919-82978i83039-83107o;
85295 83223 CDS
ID metaerg.pl|03942
allec_ids 3.4.14.-;
allgo_ids GO:0006508; GO:0008236; GO:0008239; GO:0004252; GO:0070008; GO:0051603;
allko_ids K01730; K01303;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092227.1 1 689 evalue:0.0e+00 qcov:99.90 identity:94.90;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF05448; PF00326; PF02897;
pfam_desc Acetyl xylan esterase (AXE1); Prolyl oligopeptidase family; Prolyl oligopeptidase, N-terminal beta-propeller domain;
pfam_id AXE1; Peptidase_S9; Peptidase_S9_N;
pfam_target db:Pfam-A.hmm|PF05448.12 evalue:0.00012 score:20.1 best_domain_score:18.6 name:AXE1; db:Pfam-A.hmm|PF00326.21 evalue:1.6e-69 score:232.9 best_domain_score:231.1 name:Peptidase_S9; db:Pfam-A.hmm|PF02897.15 evalue:2.8e-113 score:378.1 best_domain_score:377.8 name:Peptidase_S9_N;
sprot_desc Dipeptidyl aminopeptidase BI;
sprot_id sp|O07834|DAPB1_PSEMX;
sprot_target db:uniprot_sprot|sp|O07834|DAPB1_PSEMX 12 689 evalue:6.4e-168 qcov:98.30 identity:43.20;
86072 85326 CDS
ID metaerg.pl|03943
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006199077.1 1 248 evalue:3.5e-117 qcov:100.00 identity:85.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
tm_num 6;
86072 85326 transmembrane_helix
ID metaerg.pl|03944
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i85413-85481o85524-85592i85617-85685o85728-85796i85833-85901o85944-86012i;
86191 87246 CDS
ID metaerg.pl|03945
allec_ids 4.1.1.37;
allgo_ids GO:0004853; GO:0006779; GO:0005737; GO:0006782;
allko_ids K01599;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092225.1 1 351 evalue:1.9e-198 qcov:100.00 identity:98.00;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id CHLOROPHYLL-SYN; HEME-BIOSYNTHESIS-II; PWY0-1415; PWY-5920; PWY-5918; PWY-5531; PWY-5529; HEMESYN2-PWY;
metacyc_pathway_name 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);; heme b biosynthesis I (aerobic);; superpathway of heme b biosynthesis from uroporphyrinogen-III;; superpathway of b heme biosynthesis from glycine;; superpathay of heme b biosynthesis from glutamate;; 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; superpathway of bacteriochlorophyll a biosynthesis;; heme b biosynthesis II (anaerobic);;
metacyc_pathway_type Chlorophyllide-a-Biosynthesis;; Heme-b-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis;;
pfam_acc PF01208;
pfam_desc Uroporphyrinogen decarboxylase (URO-D);
pfam_id URO-D;
pfam_target db:Pfam-A.hmm|PF01208.17 evalue:3.3e-118 score:394.0 best_domain_score:393.9 name:URO-D;
sprot_desc Uroporphyrinogen decarboxylase;
sprot_id sp|B2J9R9|DCUP_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J9R9|DCUP_NOSP7 1 346 evalue:9.7e-189 qcov:98.60 identity:92.50;
tigrfam_acc TIGR01464;
tigrfam_desc uroporphyrinogen decarboxylase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemE;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01464 evalue:1.9e-123 score:411.0 best_domain_score:410.8 name:TIGR01464;
87559 88518 CDS
ID metaerg.pl|03946
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092224.1 1 319 evalue:2.2e-177 qcov:100.00 identity:96.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF01073; PF01370; PF13460; PF07993; PF05368;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; NAD(P)H-binding ; Male sterility protein; NmrA-like family;
pfam_id 3Beta_HSD; Epimerase; NAD_binding_10; NAD_binding_4; NmrA;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:1e-06 score:27.2 best_domain_score:26.8 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:1.3e-13 score:50.2 best_domain_score:48.6 name:Epimerase; db:Pfam-A.hmm|PF13460.6 evalue:1.2e-11 score:44.0 best_domain_score:43.5 name:NAD_binding_10; db:Pfam-A.hmm|PF07993.12 evalue:1.9e-06 score:26.5 best_domain_score:15.5 name:NAD_binding_4; db:Pfam-A.hmm|PF05368.13 evalue:1.5e-11 score:43.6 best_domain_score:35.5 name:NmrA;
89450 88533 CDS
ID metaerg.pl|03947
allgo_ids GO:0003677; GO:0004519; GO:0009307;
genomedb_OC d__Bacteria;p__Firmicutes_B;c__Desulfitobacteriia;o__Desulfitobacteriales;f__Desulfitobacteriaceae;g__Desulfosporosinus;s__Desulfosporosinus sp000960765;
genomedb_acc GCF_000960765.1;
genomedb_target db:genomedb|GCF_000960765.1|WP_045577130.1 1 302 evalue:1.4e-88 qcov:99.00 identity:56.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF04471;
pfam_desc Restriction endonuclease;
pfam_id Mrr_cat;
pfam_target db:Pfam-A.hmm|PF04471.12 evalue:1.5e-05 score:24.2 best_domain_score:23.3 name:Mrr_cat;
89937 89650 CDS
ID metaerg.pl|03948
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092223.1 1 85 evalue:6.1e-38 qcov:89.50 identity:95.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF01850;
pfam_desc PIN domain;
pfam_id PIN;
pfam_target db:Pfam-A.hmm|PF01850.21 evalue:9.7e-06 score:25.3 best_domain_score:25.2 name:PIN;
90184 89930 CDS
ID metaerg.pl|03949
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092222.1 1 84 evalue:8.6e-36 qcov:100.00 identity:97.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
90863 90483 CDS
ID metaerg.pl|03950
allko_ids K09132;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__LE011-02;s__LE011-02 sp000312705;
genomedb_acc GCF_000312705.1;
genomedb_target db:genomedb|GCF_000312705.1|WP_015083549.1 1 126 evalue:1.7e-59 qcov:100.00 identity:98.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF05168;
pfam_desc HEPN domain;
pfam_id HEPN;
pfam_target db:Pfam-A.hmm|PF05168.14 evalue:3.1e-18 score:65.3 best_domain_score:65.1 name:HEPN;
sprot_desc hypothetical protein;
sprot_id sp|Q7NLZ1|Y978_GLOVI;
sprot_target db:uniprot_sprot|sp|Q7NLZ1|Y978_GLOVI 1 121 evalue:1.9e-17 qcov:96.00 identity:41.80;
91180 90860 CDS
ID metaerg.pl|03951
allgo_ids GO:0016779;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__LE011-02;s__LE011-02 sp000312705;
genomedb_acc GCF_000312705.1;
genomedb_target db:genomedb|GCF_000312705.1|WP_015083548.1 1 106 evalue:1.9e-48 qcov:100.00 identity:93.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF01909; PF18765;
pfam_desc Nucleotidyltransferase domain; Polymerase beta, Nucleotidyltransferase;
pfam_id NTP_transf_2; Polbeta;
pfam_target db:Pfam-A.hmm|PF01909.23 evalue:9.9e-12 score:44.2 best_domain_score:44.1 name:NTP_transf_2; db:Pfam-A.hmm|PF18765.1 evalue:1.6e-08 score:33.8 best_domain_score:33.2 name:Polbeta;
91652 91296 CDS
ID metaerg.pl|03952
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus_A;s__Trichormus_A sp001858025;
genomedb_acc GCF_001858025.1;
genomedb_target db:genomedb|GCF_001858025.1|WP_071192541.1 1 118 evalue:9.5e-57 qcov:100.00 identity:94.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF18480;
pfam_desc Domain of unknown function (DUF5615);
pfam_id DUF5615;
pfam_target db:Pfam-A.hmm|PF18480.1 evalue:6e-25 score:86.0 best_domain_score:85.7 name:DUF5615;
91952 91656 CDS
ID metaerg.pl|03953
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Anabaena;s__Anabaena sp000332135;
genomedb_acc GCF_000332135.1;
genomedb_target db:genomedb|GCF_000332135.1|WP_016952164.1 23 98 evalue:2.1e-33 qcov:77.60 identity:94.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF04255;
pfam_desc Protein of unknown function (DUF433);
pfam_id DUF433;
pfam_target db:Pfam-A.hmm|PF04255.14 evalue:4.6e-26 score:89.7 best_domain_score:88.8 name:DUF433;
92328 91936 CDS
ID metaerg.pl|03954
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Anabaena_A;s__Anabaena_A cylindrica;
genomedb_acc GCF_000317695.1;
genomedb_target db:genomedb|GCF_000317695.1|WP_015217177.1 1 115 evalue:7.5e-55 qcov:88.50 identity:93.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF04255;
pfam_desc Protein of unknown function (DUF433);
pfam_id DUF433;
pfam_target db:Pfam-A.hmm|PF04255.14 evalue:6.2e-18 score:63.6 best_domain_score:63.0 name:DUF433;
93155 92601 CDS
ID metaerg.pl|03955
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092219.1 5 184 evalue:3.9e-49 qcov:97.80 identity:59.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
93397 93143 CDS
ID metaerg.pl|03956
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195063.1 1 68 evalue:2.1e-21 qcov:81.00 identity:88.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
93736 95337 CDS
ID metaerg.pl|03957
allec_ids 2.1.1.-;
allgo_ids GO:0031419; GO:0046872; GO:0051539; GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092217.1 1 533 evalue:1.0e-307 qcov:100.00 identity:98.10;
kegg_pathway_id 00350; 00340; 00380; 00150; 00626; 00450;
kegg_pathway_name Tyrosine metabolism; Histidine metabolism; Tryptophan metabolism; Androgen and estrogen metabolism; Naphthalene and anthracene degradation; Selenoamino acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PWY-5855; PWY-5209; PWY-6151; PWY-5857; PWY-6303; METH-ACETATE-PWY; PWY-5856; PWY-6142; PWY-6154; PWY-6424; UBISYN-PWY; CO2FORM-PWY; PWY-5116; PWY-1581; METHIONINE-DEG1-PWY; PWY-5328; PWY-5773; PWY-6519; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6146; PWY-6427; PWY-6395; PWY-5987; PWY-5479; PWY-6292; PWY-6477; PWY-5467; PWY-6575; PWY-6442; CODH-PWY; PWY-5041; PWY-4021; ALL-CHORISMATE-PWY; PWY-3542; PWY-6153; PWY-1061; PWY-5876; PWY-5975; PWY-5864; PWYG-321; PWY-5305; PWY-6113; PWY-5729; PWY-1422;
metacyc_pathway_name ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; methanogenesis from acetate;; ubiquinol-9 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; autoinducer AI-2 biosynthesis II (Vibrio);; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; xanthohumol biosynthesis;; biotin biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; gibberellin inactivation II (methylation);; gramine biosynthesis;; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; superpathway of chorismate metabolism;; choline biosynthesis II;; autoinducer AI-2 biosynthesis I;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; mycolate biosynthesis;; bixin biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; vitamin E biosynthesis (tocopherols);;
metacyc_pathway_type Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Autoinducer-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; CYSTEINE-SYN; Super-Pathways;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Autotrophic-CO2-Fixation;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; Super-Pathways;; Choline-Biosynthesis;; Autoinducer-Biosynthesis;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; Quinone-Biosynthesis; Vitamin-Biosynthesis;;
pfam_acc PF02310; PF13282; PF04055;
pfam_desc B12 binding domain; Domain of unknown function (DUF4070); Radical SAM superfamily;
pfam_id B12-binding; DUF4070; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF02310.19 evalue:1.4e-11 score:43.7 best_domain_score:40.1 name:B12-binding; db:Pfam-A.hmm|PF13282.6 evalue:2.4e-48 score:163.0 best_domain_score:161.5 name:DUF4070; db:Pfam-A.hmm|PF04055.21 evalue:1.6e-18 score:66.8 best_domain_score:63.5 name:Radical_SAM;
sprot_desc Uncharacterized methyltransferase sll1242;
sprot_id sp|P42349|Y1242_SYNY3;
sprot_target db:uniprot_sprot|sp|P42349|Y1242_SYNY3 1 533 evalue:4.5e-238 qcov:100.00 identity:74.60;
97912 95852 CDS
ID metaerg.pl|03958
allec_ids 3.1.-.-;
allgo_ids GO:0003723; GO:0004540; GO:0000178; GO:0000175;
allko_ids K01147;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092214.1 1 686 evalue:0.0e+00 qcov:100.00 identity:96.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00773;
pfam_desc RNB domain;
pfam_id RNB;
pfam_target db:Pfam-A.hmm|PF00773.19 evalue:1.5e-76 score:257.1 best_domain_score:252.5 name:RNB;
sprot_desc Uncharacterized ribonuclease sll1290;
sprot_id sp|P73177|RN2H_SYNY3;
sprot_target db:uniprot_sprot|sp|P73177|RN2H_SYNY3 1 681 evalue:2.5e-228 qcov:99.30 identity:58.40;
98224 98009 CDS
ID metaerg.pl|03959
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02963;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092213.1 1 71 evalue:1.1e-31 qcov:100.00 identity:100.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF01084;
pfam_desc Ribosomal protein S18;
pfam_id Ribosomal_S18;
pfam_target db:Pfam-A.hmm|PF01084.20 evalue:1.2e-27 score:95.1 best_domain_score:94.8 name:Ribosomal_S18;
sprot_desc 30S ribosomal protein S18;
sprot_id sp|Q3MDJ1|RS18_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MDJ1|RS18_ANAVT 1 70 evalue:8.4e-31 qcov:98.60 identity:91.40;
tigrfam_acc TIGR00165;
tigrfam_desc ribosomal protein bS18;
tigrfam_mainrole Protein synthesis;
tigrfam_name S18;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00165 evalue:1.3e-29 score:101.3 best_domain_score:101.2 name:TIGR00165;
99071 98466 CDS
ID metaerg.pl|03960
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195054.1 17 201 evalue:2.0e-91 qcov:92.00 identity:95.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF06271;
pfam_desc RDD family;
pfam_id RDD;
pfam_target db:Pfam-A.hmm|PF06271.12 evalue:8.5e-13 score:48.0 best_domain_score:46.4 name:RDD;
tm_num 1;
99071 98466 transmembrane_helix
ID metaerg.pl|03961
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology o98637-98705i;
99077 100339 CDS
ID metaerg.pl|03962
allec_ids 2.10.1.1;
allgo_ids GO:0032324; GO:0046872; GO:0061599; GO:0006777;
allko_ids K03750;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092208.1 1 419 evalue:3.8e-217 qcov:99.80 identity:92.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00994; PF03454; PF03453;
pfam_desc Probable molybdopterin binding domain; MoeA C-terminal region (domain IV); MoeA N-terminal region (domain I and II);
pfam_id MoCF_biosynth; MoeA_C; MoeA_N;
pfam_target db:Pfam-A.hmm|PF00994.24 evalue:7.7e-26 score:89.7 best_domain_score:89.0 name:MoCF_biosynth; db:Pfam-A.hmm|PF03454.15 evalue:5.7e-13 score:48.1 best_domain_score:46.9 name:MoeA_C; db:Pfam-A.hmm|PF03453.17 evalue:2.7e-41 score:140.2 best_domain_score:136.1 name:MoeA_N;
sprot_desc Molybdopterin molybdenumtransferase;
sprot_id sp|Q44243|MOEA_NOSS1;
sprot_target db:uniprot_sprot|sp|Q44243|MOEA_NOSS1 1 419 evalue:2.8e-166 qcov:99.80 identity:71.10;
tigrfam_acc TIGR00177;
tigrfam_desc molybdenum cofactor synthesis domain;
tigrfam_name molyb_syn;
tigrfam_target db:TIGRFAMs.hmm|TIGR00177 evalue:7.3e-32 score:109.5 best_domain_score:108.9 name:TIGR00177;
104767 100595 CDS
ID metaerg.pl|03963
allgo_ids GO:0000156; GO:0000160; GO:0005737; GO:0006935; GO:0008984;
allko_ids K07673; K01120; K07639; K08475; K07646; K13598; K07641; K07652; K07777; K07682; K07649; K00936; K07654; K07637; K03407; K07648; K02478; K07679; K07698; K07718; K07651; K07768; K11633; K11354; K07778; K11328; K13533; K08884; K00873; K07711; K02484; K11640; K11356; K11711; K07642; K07643; K11231; K02491; K07708; K07677; K07645; K08282; K07704; K10909; K07716; K07697; K02489; K01768; K07656; K07640; K07710; K03388; K02668; K10916; K08479; K13587; K02030; K11527; K07678; K10715; K02480; K14489; K08801; K02482; K07636; K07653; K07638; K13532; K07709; K07644; K01769; K10681; K07676; K06379; K07650; K10942; K13040; K07647; K07717; K07675; K07769; K14509; K11520; K11383; K02486; K12767; K11357; K02342; K11629; K10125; K04757;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195052.1 1 1390 evalue:0.0e+00 qcov:100.00 identity:94.20;
kegg_pathway_id 00710; 00010; 03030; 00230; 05111; 03090; 00620; 04011; 02020; 00790;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; DNA replication; Purine metabolism; Vibrio cholerae pathogenic cycle; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF01339; PF01739; PF03705; PF02518; PF00512; PF13596; PF08448; PF00072;
pfam_desc CheB methylesterase; CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain; PAS fold; Response regulator receiver domain;
pfam_id CheB_methylest; CheR; CheR_N; HATPase_c; HisKA; PAS_10; PAS_4; Response_reg;
pfam_target db:Pfam-A.hmm|PF01339.17 evalue:2e-56 score:189.6 best_domain_score:188.5 name:CheB_methylest; db:Pfam-A.hmm|PF01739.18 evalue:1.7e-55 score:186.8 best_domain_score:185.8 name:CheR; db:Pfam-A.hmm|PF03705.15 evalue:2.6e-15 score:55.1 best_domain_score:53.9 name:CheR_N; db:Pfam-A.hmm|PF02518.26 evalue:1.4e-29 score:102.1 best_domain_score:100.0 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.9e-13 score:49.5 best_domain_score:49.5 name:HisKA; db:Pfam-A.hmm|PF13596.6 evalue:1.2e-28 score:99.0 best_domain_score:97.6 name:PAS_10; db:Pfam-A.hmm|PF08448.10 evalue:4.2e-06 score:26.2 best_domain_score:13.0 name:PAS_4; db:Pfam-A.hmm|PF00072.24 evalue:2.3e-18 score:65.7 best_domain_score:61.9 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.7e-06 score:27.3 best_domain_score:14.7 name:TIGR00229;
105017 106297 CDS
ID metaerg.pl|03964
allec_ids 1.1.1.23;
allgo_ids GO:0000105; GO:0004399; GO:0008270; GO:0051287; GO:0055114;
allko_ids K00013; K01496;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092207.1 1 426 evalue:1.4e-227 qcov:100.00 identity:96.50;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PRPP-PWY; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; HISTIDINE-SYN;;
pfam_acc PF00815;
pfam_desc Histidinol dehydrogenase;
pfam_id Histidinol_dh;
pfam_target db:Pfam-A.hmm|PF00815.20 evalue:5e-166 score:552.0 best_domain_score:551.7 name:Histidinol_dh;
sprot_desc Histidinol dehydrogenase 1;
sprot_id sp|Q8YSM8|HISX1_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YSM8|HISX1_NOSS1 1 426 evalue:6.4e-203 qcov:100.00 identity:84.50;
tigrfam_acc TIGR00069;
tigrfam_desc histidinol dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name hisD;
tigrfam_sub1role Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00069 evalue:6.7e-162 score:538.3 best_domain_score:538.2 name:TIGR00069;
107248 106658 CDS
ID metaerg.pl|03965
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0016021; GO:0005886; GO:0016671; GO:0045454;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093991.1 1 196 evalue:2.6e-99 qcov:100.00 identity:93.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00578; PF08534; PF00085; PF13098; PF13899; PF13905;
pfam_desc AhpC/TSA family; Redoxin; Thioredoxin; Thioredoxin-like domain; Thioredoxin-like; Thioredoxin-like;
pfam_id AhpC-TSA; Redoxin; Thioredoxin; Thioredoxin_2; Thioredoxin_7; Thioredoxin_8;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:9.4e-08 score:31.3 best_domain_score:30.9 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:2.9e-09 score:36.0 best_domain_score:35.2 name:Redoxin; db:Pfam-A.hmm|PF00085.20 evalue:3.7e-20 score:71.1 best_domain_score:70.6 name:Thioredoxin; db:Pfam-A.hmm|PF13098.6 evalue:8.7e-09 score:35.0 best_domain_score:34.4 name:Thioredoxin_2; db:Pfam-A.hmm|PF13899.6 evalue:3.7e-08 score:32.7 best_domain_score:32.1 name:Thioredoxin_7; db:Pfam-A.hmm|PF13905.6 evalue:1.1e-07 score:31.3 best_domain_score:24.9 name:Thioredoxin_8;
sp YES;
sprot_desc Thiol:disulfide interchange protein TxlA homolog;
sprot_id sp|P73920|TXLA_SYNY3;
sprot_target db:uniprot_sprot|sp|P73920|TXLA_SYNY3 20 192 evalue:1.6e-47 qcov:88.30 identity:54.30;
tm_num 1;
106658 106810 signal_peptide
ID metaerg.pl|03966
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
107248 106658 transmembrane_helix
ID metaerg.pl|03967
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
topology i106718-106777o;
107388 107792 CDS
ID metaerg.pl|03968
allko_ids K03390; K00443; K00532; K03047; K00240; K00395; K00123; K03941; K00245; K00337; K00873; K00204; K04014; K11260; K00122; K00380; K00125; K00335; K00226; K00205; K00336; K00441; K00171; K00197; K11181; K00172; K05580; K00436; K00533; K00124; K00338; K00265; K00390; K08349; K08264; K00207; K03388; K00176; K00170; K05588;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc commune;
genomedb_acc GCF_003113895.1;
genomedb_target db:genomedb|GCF_003113895.1|WP_109009783.1 1 134 evalue:7.9e-68 qcov:100.00 identity:94.80;
kegg_pathway_id 00983; 00720; 00632; 00240; 00450; 00620; 00790; 03020; 00640; 00650; 00630; 05012; 00010; 00710; 00920; 00230; 00770; 00020; 00910; 02020; 00633; 00251; 00680; 00130; 00190; 00410;
kegg_pathway_name Drug metabolism - other enzymes; Reductive carboxylate cycle (CO2 fixation); Benzoate degradation via CoA ligation; Pyrimidine metabolism; Selenoamino acid metabolism; Pyruvate metabolism; Folate biosynthesis; RNA polymerase; Propanoate metabolism; Butanoate metabolism; Glyoxylate and dicarboxylate metabolism; Parkinson's disease; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Sulfur metabolism; Purine metabolism; Pantothenate and CoA biosynthesis; Citrate cycle (TCA cycle); Nitrogen metabolism; Two-component system - General; Trinitrotoluene degradation; Glutamate metabolism; Methane metabolism; Ubiquinone biosynthesis; Oxidative phosphorylation; beta-Alanine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF00037; PF13237; PF12797; PF14697; PF12837; PF12838; PF13187; PF09383;
pfam_desc 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; NIL domain;
pfam_id Fer4; Fer4_10; Fer4_2; Fer4_21; Fer4_6; Fer4_7; Fer4_9; NIL;
pfam_target db:Pfam-A.hmm|PF00037.27 evalue:2.4e-14 score:51.7 best_domain_score:32.0 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:4.7e-07 score:29.1 best_domain_score:25.0 name:Fer4_10; db:Pfam-A.hmm|PF12797.7 evalue:3e-07 score:29.4 best_domain_score:26.5 name:Fer4_2; db:Pfam-A.hmm|PF14697.6 evalue:1.9e-09 score:36.8 best_domain_score:35.9 name:Fer4_21; db:Pfam-A.hmm|PF12837.7 evalue:2.3e-11 score:42.5 best_domain_score:25.4 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:3.3e-12 score:46.0 best_domain_score:33.8 name:Fer4_7; db:Pfam-A.hmm|PF13187.6 evalue:4.5e-09 score:35.6 best_domain_score:28.6 name:Fer4_9; db:Pfam-A.hmm|PF09383.10 evalue:5e-14 score:51.2 best_domain_score:50.8 name:NIL;
108563 107793 CDS
ID metaerg.pl|03969
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092205.1 1 256 evalue:7.1e-134 qcov:100.00 identity:96.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
111517 108794 CDS
ID metaerg.pl|03970
allgo_ids GO:0005515;
allko_ids K07639; K08475; K07646; K07641; K13598; K07652; K07649; K00936; K07654; K03407; K07648; K02478; K07679; K07698; K07718; K07651; K07768; K11633; K11354; K07778; K11328; K13533; K07711; K00760; K02484; K11640; K11356; K11711; K07642; K11231; K07643; K02491; K07677; K07645; K07708; K08282; K07704; K07716; K07697; K02489; K01768; K07656; K07710; K07640; K03388; K02668; K10916; K08479; K13587; K11527; K02030; K07678; K10715; K02480; K02482; K08801; K07636; K07638; K07653; K13532; K07709; K07644; K01769; K10681; K06379; K13040; K10942; K07647; K07717; K07675; K07769; K11520; K14509; K02486; K11383; K12767; K11357; K11629; K10125; K04757;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093990.1 1 904 evalue:0.0e+00 qcov:99.70 identity:88.00;
kegg_pathway_id 00790; 05111; 00230; 04011; 02020; 03090; 00983;
kegg_pathway_name Folate biosynthesis; Vibrio cholerae pathogenic cycle; Purine metabolism; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Drug metabolism - other enzymes;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
pfam_acc PF01590; PF13185; PF13492; PF02518; PF00512; PF00360;
pfam_desc GAF domain; GAF domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Phytochrome region;
pfam_id GAF; GAF_2; GAF_3; HATPase_c; HisKA; PHY;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:1.5e-48 score:164.0 best_domain_score:78.8 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:3.7e-15 score:55.7 best_domain_score:34.4 name:GAF_2; db:Pfam-A.hmm|PF13492.6 evalue:1.2e-14 score:53.9 best_domain_score:25.0 name:GAF_3; db:Pfam-A.hmm|PF02518.26 evalue:2.4e-20 score:72.4 best_domain_score:71.4 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:4.8e-12 score:45.0 best_domain_score:45.0 name:HisKA; db:Pfam-A.hmm|PF00360.20 evalue:7.1e-10 score:37.7 best_domain_score:37.4 name:PHY;
112337 111912 CDS
ID metaerg.pl|03971
allec_ids 3.2.2.-;
allgo_ids GO:0016799; GO:1901135;
allko_ids K09935;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092204.1 1 138 evalue:4.6e-66 qcov:97.90 identity:89.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00262058; 72.6766; 0.0313221; 72.731; 0.0204655;
metacyc_pathway_id PWY-2681; PWY-5381;
metacyc_pathway_name trans-zeatin biosynthesis;; pyridine nucleotide cycling (plants);;
metacyc_pathway_type CYTOKININ-BIOSYNTHESIS;; NAD-Metabolism;;
pfam_acc PF08719;
pfam_desc Domain of unknown function (DUF1768);
pfam_id DUF1768;
pfam_target db:Pfam-A.hmm|PF08719.11 evalue:2.3e-33 score:114.9 best_domain_score:114.8 name:DUF1768;
sprot_desc N-glycosidase Npun_R5314;
sprot_id sp|B2J4E5|RIBX_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J4E5|RIBX_NOSP7 2 122 evalue:1.8e-48 qcov:85.80 identity:74.40;
tigrfam_acc TIGR02464;
tigrfam_desc conserved hypothetical protein;
tigrfam_name ribofla_fusion;
tigrfam_target db:TIGRFAMs.hmm|TIGR02464 evalue:4.2e-42 score:143.2 best_domain_score:143.0 name:TIGR02464;
>Feature NODE_22_length_111498_cov_6.95415
603 1 CDS
ID metaerg.pl|03972
allec_ids 5.1.99.6;
allgo_ids GO:0046872; GO:0052856; GO:0000166;
allko_ids K17759;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000024.1_21 5 201 evalue:7.3e-33 qcov:98.00 identity:47.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF03853;
pfam_desc YjeF-related protein N-terminus;
pfam_id YjeF_N;
pfam_target db:Pfam-A.hmm|PF03853.15 evalue:4.9e-31 score:107.1 best_domain_score:106.8 name:YjeF_N;
sprot_desc NAD(P)H-hydrate epimerase;
sprot_id sp|F0SLK8|NNRE_RUBBR;
sprot_target db:uniprot_sprot|sp|F0SLK8|NNRE_RUBBR 28 200 evalue:4.3e-24 qcov:86.10 identity:41.30;
tigrfam_acc TIGR00197;
tigrfam_desc YjeF family N-terminal domain;
tigrfam_mainrole Unknown function;
tigrfam_name yjeF_nterm;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00197 evalue:1.5e-33 score:115.3 best_domain_score:115.1 name:TIGR00197;
797 600 CDS
ID metaerg.pl|03973
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000018.1_31 1 65 evalue:6.7e-28 qcov:100.00 identity:86.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
1255 875 CDS
ID metaerg.pl|03974
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV26209.1 1 125 evalue:5.8e-44 qcov:99.20 identity:64.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
tigrfam_acc TIGR04138;
tigrfam_desc Verruc_Plancto-restricted protein;
tigrfam_name Plancto_Ver_chp;
tigrfam_target db:TIGRFAMs.hmm|TIGR04138 evalue:6.3e-37 score:125.5 best_domain_score:125.3 name:TIGR04138;
2607 1315 CDS
ID metaerg.pl|03975
allec_ids 2.1.2.1;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0004372; GO:0019264; GO:0035999;
allko_ids K00600;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000016.1_101 12 425 evalue:4.5e-173 qcov:96.30 identity:73.70;
kegg_pathway_id 00460; 00680; 00670; 00260;
kegg_pathway_name Cyanoamino acid metabolism; Methane metabolism; One carbon pool by folate; Glycine, serine and threonine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-5497; PWY-2201; SER-GLYSYN-PWY; PWY-3661; PWY-181; PWY-3841; PWY-1622; PWY-2161; 1CMET2-PWY; GLYSYN-PWY;
metacyc_pathway_name purine nucleobases degradation II (anaerobic);; folate transformations I;; superpathway of L-serine and glycine biosynthesis I;; glycine betaine degradation I;; photorespiration;; folate transformations II;; formaldehyde assimilation I (serine pathway);; folate polyglutamylation;; N10-formyl-tetrahydrofolate biosynthesis;; glycine biosynthesis I;;
metacyc_pathway_type Fermentation; Purine-Degradation;; Folate-Transformations;; Amino-Acid-Biosynthesis; Super-Pathways;; Glycine-Betaine-Degradation;; Photosynthesis;; Folate-Transformations;; Formaldehyde-Assimilation;; Folate-Biosynthesis;; Folate-Biosynthesis;; GLYCINE-SYN;;
pfam_acc PF00155; PF00266; PF01212; PF00464;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Beta-eliminating lyase; Serine hydroxymethyltransferase;
pfam_id Aminotran_1_2; Aminotran_5; Beta_elim_lyase; SHMT;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1e-09 score:37.3 best_domain_score:36.5 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:1.4e-06 score:26.7 best_domain_score:26.1 name:Aminotran_5; db:Pfam-A.hmm|PF01212.21 evalue:1.2e-07 score:30.6 best_domain_score:28.8 name:Beta_elim_lyase; db:Pfam-A.hmm|PF00464.19 evalue:1.9e-170 score:566.0 best_domain_score:565.8 name:SHMT;
sprot_desc Serine hydroxymethyltransferase;
sprot_id sp|B1YEH3|GLYA_EXIS2;
sprot_target db:uniprot_sprot|sp|B1YEH3|GLYA_EXIS2 9 424 evalue:8.4e-150 qcov:96.70 identity:63.70;
3674 2619 CDS
ID metaerg.pl|03976
allec_ids 1.4.1.9;
allgo_ids GO:0006520; GO:0016491; GO:0055114; GO:0050049; GO:0006552;
allko_ids K00270; K00263;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06630.1 1 350 evalue:2.1e-144 qcov:99.70 identity:70.70;
kegg_pathway_id 00290; 00280; 00360; 00400;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Phenylalanine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00208; PF02812;
pfam_desc Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF00208.21 evalue:5.6e-17 score:61.5 best_domain_score:34.5 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:1.8e-23 score:82.1 best_domain_score:81.6 name:ELFV_dehydrog_N;
sprot_desc Leucine dehydrogenase;
sprot_id sp|P54531|DHLE_BACSU;
sprot_target db:uniprot_sprot|sp|P54531|DHLE_BACSU 1 351 evalue:2.7e-114 qcov:100.00 identity:53.40;
4983 3781 CDS
ID metaerg.pl|03977
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005886; GO:0003995; GO:0050660; GO:0052890; GO:0030435;
allko_ids K11538; K11731; K08098; K00249; K14448; K00253; K00248; K11410; K06446; K00120; K00232; K00252; K09478; K18244;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA6934;s__UBA6934 sp002346625;
genomedb_acc GCA_002346625.1;
genomedb_target db:genomedb|GCA_002346625.1|DEAF01000001.1_67 7 399 evalue:1.1e-109 qcov:98.20 identity:54.00;
kegg_pathway_id 00071; 00410; 00930; 00626; 00624; 00310; 00280; 01031; 00592; 00650; 00640; 00903; 01040; 00632; 00380; 00361;
kegg_pathway_name Fatty acid metabolism; beta-Alanine metabolism; Caprolactam degradation; Naphthalene and anthracene degradation; 1- and 2-Methylnaphthalene degradation; Lysine degradation; Valine, leucine and isoleucine degradation; Glycan structures - biosynthesis 2; alpha-Linolenic acid metabolism; Butanoate metabolism; Propanoate metabolism; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; Benzoate degradation via CoA ligation; Tryptophan metabolism; gamma-Hexachlorocyclohexane degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id CARNMET-PWY; PWY-2582; PWY-6544; PWY-699;
metacyc_pathway_name L-carnitine degradation I;; brassinosteroid biosynthesis II;; superpathway of C28 brassinosteroid biosynthesis;; brassinosteroid biosynthesis I;;
metacyc_pathway_type CARN-DEG;; Brassinosteroid-Biosynthesis;; Super-Pathways;; Brassinosteroid-Biosynthesis;;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:2.2e-42 score:144.0 best_domain_score:143.0 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:1.5e-18 score:66.6 best_domain_score:65.6 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:9.2e-21 score:73.1 best_domain_score:72.3 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:2.3e-33 score:114.5 best_domain_score:113.4 name:Acyl-CoA_dh_N;
sprot_desc Acyl-CoA dehydrogenase;
sprot_id sp|P45857|ACDB_BACSU;
sprot_target db:uniprot_sprot|sp|P45857|ACDB_BACSU 4 394 evalue:4.2e-71 qcov:97.80 identity:39.90;
5848 4985 CDS
ID metaerg.pl|03978
allec_ids 1.1.1.157;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0008691; GO:0070403; GO:0019605; GO:0030435;
allko_ids K07511; K01825; K13247; K10527; K07515; K07514; K15016; K05556; K13816; K07516; K01782; K01692; K00022; K00074;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000066.1_54 8 285 evalue:1.4e-114 qcov:96.90 identity:75.20;
kegg_pathway_id 00410; 00592; 00071; 01057; 00640; 00650; 00903; 00062; 01040; 00380; 00930; 00632; 00280; 00281; 00310;
kegg_pathway_name beta-Alanine metabolism; alpha-Linolenic acid metabolism; Fatty acid metabolism; Biosynthesis of type II polyketide products; Propanoate metabolism; Butanoate metabolism; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids; Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00725; PF02737;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain;
pfam_id 3HCDH; 3HCDH_N;
pfam_target db:Pfam-A.hmm|PF00725.22 evalue:1.5e-36 score:124.1 best_domain_score:122.7 name:3HCDH; db:Pfam-A.hmm|PF02737.18 evalue:8e-67 score:223.8 best_domain_score:223.3 name:3HCDH_N;
sprot_desc Probable 3-hydroxybutyryl-CoA dehydrogenase;
sprot_id sp|P45856|HBD_BACSU;
sprot_target db:uniprot_sprot|sp|P45856|HBD_BACSU 5 286 evalue:1.8e-87 qcov:98.30 identity:59.20;
6320 5928 CDS
ID metaerg.pl|03979
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
tm_num 3;
6320 5928 transmembrane_helix
ID metaerg.pl|03980
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology o5958-6026i6063-6131o6249-6308i;
7566 6355 CDS
ID metaerg.pl|03981
allec_ids 2.3.1.9; 2.3.1.16;
allgo_ids GO:0016747; GO:0005737; GO:0003985; GO:0003988; GO:0006635;
allko_ids K07508; K07823; K07513; K07550; K07509; K00632; K00626; K02615;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000023.1_37 1 400 evalue:8.5e-166 qcov:99.30 identity:73.20;
kegg_pathway_id 01040; 00362; 00062; 00620; 00650; 00640; 00592; 00380; 00632; 00120; 02020; 00072; 00071; 00280; 00281; 00310;
kegg_pathway_name Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation; Fatty acid elongation in mitochondria; Pyruvate metabolism; Butanoate metabolism; Propanoate metabolism; alpha-Linolenic acid metabolism; Tryptophan metabolism; Benzoate degradation via CoA ligation; Bile acid biosynthesis; Two-component system - General; Synthesis and degradation of ketone bodies; Fatty acid metabolism; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY1-3; PWY-5184; PWY-561; PWY-5910; PWY-6435; GLUDEG-II-PWY; PWY-922; TRYPTOPHAN-DEGRADATION-1; PWY66-368; PWY-5789; PWY-5327; CENTFERM-PWY; PWY-5177; PWY-5136; ACETOACETATE-DEG-PWY; ILEUDEG-PWY; PWY-5676; PWY-6146; PWY-6174; FAO-PWY;
metacyc_pathway_name polyhydroxybutanoate biosynthesis;; toluene degradation VI (anaerobic);; superpathway of glyoxylate cycle and fatty acid degradation;; superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; 4-hydroxybenzoate biosynthesis III (plants);; L-glutamate degradation VII (to butanoate);; mevalonate pathway I;; L-tryptophan degradation III (eukaryotic);; ketolysis;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; superpathway of L-lysine degradation;; pyruvate fermentation to butanoate;; glutaryl-CoA degradation;; fatty acid β-oxidation II (peroxisome);; acetoacetate degradation (to acetyl CoA);; L-isoleucine degradation I;; acetyl-CoA fermentation to butanoate II;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; mevalonate pathway II (archaea);; fatty acid β-oxidation I;;
metacyc_pathway_type Storage-Compounds-Biosynthesis;; Super-Pathways; TOLUENE-DEG;; Energy-Metabolism; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; 4-Hydroxybenzoate-Biosynthesis;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Mevalonate-Pathways;; Super-Pathways; TRYPTOPHAN-DEG;; OTHER-ENERGY;; Autotrophic-CO2-Fixation;; LYSINE-DEG; Super-Pathways;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;; CARBOXYLATES-DEG;; Fatty-Acid-Degradation;; Fatty-Acid-and-Lipid-Degradation;; ISOLEUCINE-DEG;; Acetyl-CoA-Butyrate; Super-Pathways;; Biosynthesis; Super-Pathways;; Mevalonate-Pathways;; Fatty-Acid-Degradation;;
pfam_acc PF00109; PF02803; PF00108;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id ketoacyl-synt; Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:1.2e-06 score:27.5 best_domain_score:24.1 name:ketoacyl-synt; db:Pfam-A.hmm|PF02803.18 evalue:1.1e-43 score:147.1 best_domain_score:145.5 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:2.8e-88 score:294.9 best_domain_score:294.4 name:Thiolase_N;
sp YES;
sprot_desc Acetyl-CoA acetyltransferase;
sprot_id sp|Q9I2A8|ATOB_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I2A8|ATOB_PSEAE 9 403 evalue:7.7e-105 qcov:98.00 identity:51.80;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:1.9e-132 score:441.0 best_domain_score:440.8 name:TIGR01930;
6355 6474 signal_peptide
ID metaerg.pl|03982
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
8730 7780 CDS
ID metaerg.pl|03983
allec_ids 3.1.1.-;
allgo_ids GO:0016787; GO:0046872;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000066.1_50 27 306 evalue:1.6e-114 qcov:88.60 identity:70.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-6519; PWY0-1300; BIOTIN-BIOSYNTHESIS-PWY; LIPAS-PWY; PWY-6558;
metacyc_pathway_name 8-amino-7-oxononanoate biosynthesis I;; 2-O-α-mannosyl-D-glycerate degradation;; biotin biosynthesis I;; triacylglycerol degradation;; heparan sulfate biosynthesis (late stages);;
metacyc_pathway_type 7-Keto-8-aminopelargonate-Biosynthesis;; Sugars-And-Polysaccharides-Degradation;; BIOTIN-SYN; Super-Pathways;; Fatty-Acid-and-Lipid-Degradation;; Glycosaminoglycans-Biosynthesis;;
pfam_acc PF00753; PF12706;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:2.4e-17 score:62.8 best_domain_score:60.9 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:1.6e-07 score:30.3 best_domain_score:29.5 name:Lactamase_B_2;
sprot_desc Probable quorum-quenching lactonase YtnP;
sprot_id sp|O34760|YTNP_BACSU;
sprot_target db:uniprot_sprot|sp|O34760|YTNP_BACSU 31 298 evalue:3.7e-38 qcov:84.80 identity:34.60;
9602 8781 CDS
ID metaerg.pl|03984
allec_ids 2.7.7.7;
allko_ids K02342; K02337;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:3.8e-42 score:143.4 best_domain_score:142.9 name:DEDDh;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000023.1_36 1 267 evalue:2.3e-74 qcov:97.80 identity:56.20;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00929;
pfam_desc Exonuclease;
pfam_id RNase_T;
pfam_target db:Pfam-A.hmm|PF00929.24 evalue:7.9e-27 score:94.0 best_domain_score:93.5 name:RNase_T;
tigrfam_acc TIGR00573;
tigrfam_desc exonuclease, DNA polymerase III, epsilon subunit family;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnaq;
tigrfam_sub1role Degradation of DNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00573 evalue:1.6e-25 score:89.1 best_domain_score:88.7 name:TIGR00573;
10339 9599 CDS
ID metaerg.pl|03985
allgo_ids GO:0048037; GO:0005737; GO:0050662; GO:0003677; GO:0003700; GO:0045892; GO:0051775;
allko_ids K01926;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2982;s__UBA2982 sp002347035;
genomedb_acc GCA_002347035.1;
genomedb_target db:genomedb|GCA_002347035.1|DEAM01000031.1_11 39 242 evalue:3.4e-56 qcov:82.90 identity:59.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF02629; PF06971;
pfam_desc CoA binding domain; Putative DNA-binding protein N-terminus;
pfam_id CoA_binding; Put_DNA-bind_N;
pfam_target db:Pfam-A.hmm|PF02629.19 evalue:2.4e-17 score:62.6 best_domain_score:62.1 name:CoA_binding; db:Pfam-A.hmm|PF06971.13 evalue:1.1e-18 score:66.3 best_domain_score:65.5 name:Put_DNA-bind_N;
sprot_desc Redox-sensing transcriptional repressor Rex;
sprot_id sp|Q3AF82|REX_CARHZ;
sprot_target db:uniprot_sprot|sp|Q3AF82|REX_CARHZ 40 242 evalue:1.3e-43 qcov:82.50 identity:49.30;
11193 10336 CDS
ID metaerg.pl|03986
allec_ids 2.1.1.182;
allgo_ids GO:0005737; GO:0052908; GO:0003723; GO:0000179;
allko_ids K02528;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000066.1_47 10 265 evalue:5.4e-74 qcov:89.80 identity:58.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00398;
pfam_desc Ribosomal RNA adenine dimethylase;
pfam_id RrnaAD;
pfam_target db:Pfam-A.hmm|PF00398.20 evalue:1.1e-54 score:184.5 best_domain_score:184.3 name:RrnaAD;
sprot_desc Ribosomal RNA small subunit methyltransferase A;
sprot_id sp|Q39W34|RSMA_GEOMG;
sprot_target db:uniprot_sprot|sp|Q39W34|RSMA_GEOMG 10 270 evalue:4.5e-43 qcov:91.60 identity:42.50;
tigrfam_acc TIGR00755;
tigrfam_desc ribosomal RNA small subunit methyltransferase A;
tigrfam_mainrole Protein synthesis;
tigrfam_name ksgA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00755 evalue:6e-77 score:257.6 best_domain_score:257.4 name:TIGR00755;
12776 11193 CDS
ID metaerg.pl|03987
allgo_ids GO:0005515;
allko_ids K13298; K01120; K13757; K13763; K13756; K08718; K01768; K13762;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000016.1_94 4 526 evalue:3.9e-150 qcov:99.20 identity:55.60;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF01590; PF13185; PF13492; PF07228;
pfam_desc GAF domain; GAF domain; GAF domain; Stage II sporulation protein E (SpoIIE);
pfam_id GAF; GAF_2; GAF_3; SpoIIE;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:2.5e-10 score:40.3 best_domain_score:39.3 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:7.3e-13 score:48.2 best_domain_score:46.8 name:GAF_2; db:Pfam-A.hmm|PF13492.6 evalue:1.4e-08 score:34.4 best_domain_score:32.6 name:GAF_3; db:Pfam-A.hmm|PF07228.12 evalue:1.4e-40 score:138.5 best_domain_score:136.9 name:SpoIIE;
13213 12773 CDS
ID metaerg.pl|03988
allko_ids K06379; K04757; K08801; K08282;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000324.1_51 5 142 evalue:5.1e-44 qcov:94.50 identity:65.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF13581;
pfam_desc Histidine kinase-like ATPase domain;
pfam_id HATPase_c_2;
pfam_target db:Pfam-A.hmm|PF13581.6 evalue:3.5e-26 score:90.8 best_domain_score:90.7 name:HATPase_c_2;
13635 13303 CDS
ID metaerg.pl|03989
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatirosa;s__Gemmatirosa kalamazoonesis;
genomedb_acc GCF_000522985.1;
genomedb_target db:genomedb|GCF_000522985.1|WP_025412453.1 1 110 evalue:1.4e-41 qcov:100.00 identity:78.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF01740; PF13466;
pfam_desc STAS domain; STAS domain;
pfam_id STAS; STAS_2;
pfam_target db:Pfam-A.hmm|PF01740.21 evalue:1e-17 score:63.1 best_domain_score:63.0 name:STAS; db:Pfam-A.hmm|PF13466.6 evalue:9.7e-12 score:44.3 best_domain_score:44.0 name:STAS_2;
tigrfam_acc TIGR00377;
tigrfam_desc anti-anti-sigma factor;
tigrfam_mainrole Regulatory functions;
tigrfam_name ant_ant_sig;
tigrfam_sub1role Protein interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00377 evalue:4e-20 score:70.9 best_domain_score:70.7 name:TIGR00377;
14741 13803 CDS
ID metaerg.pl|03990
allec_ids 2.3.1.8;
allgo_ids GO:0016746; GO:0005737; GO:0008959; GO:0006085;
allko_ids K06873; K00625; K13788;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000016.1_91 1 311 evalue:1.7e-97 qcov:99.70 identity:62.50;
kegg_pathway_id 00620; 00430; 00640;
kegg_pathway_name Pyruvate metabolism; Taurine and hypotaurine metabolism; Propanoate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PROPFERM-PWY; FERMENTATION-PWY; P461-PWY; METH-ACETATE-PWY; ACETATEUTIL-PWY; PWY-5497; P441-PWY; PWY-5482; PWY-5100; P122-PWY; PWY-5600; P142-PWY; P161-PWY; PWY-5485; P41-PWY; PWY-5676; PWY0-1312; P3-PWY; PWY-1281; PWY-5327;
metacyc_pathway_name L-alanine fermentation to propanoate and acetate;; mixed acid fermentation;; hexitol fermentation to lactate, formate, ethanol and acetate;; methanogenesis from acetate;; superpathway of acetate utilization and formation;; purine nucleobases degradation II (anaerobic);; superpathway of N-acetylneuraminate degradation;; pyruvate fermentation to acetate II;; pyruvate fermentation to acetate and lactate II;; heterolactic fermentation;; pyruvate fermentation to acetate VII;; pyruvate fermentation to acetate I;; acetylene degradation (anaerobic);; pyruvate fermentation to acetate IV;; pyruvate fermentation to acetate and (S)-lactate I;; acetyl-CoA fermentation to butanoate II;; acetate and ATP formation from acetyl-CoA I;; gallate degradation III (anaerobic);; sulfoacetaldehyde degradation I;; superpathway of L-lysine degradation;;
metacyc_pathway_type Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; METHANOGENESIS;; CARBOXYLATES-DEG; Super-Pathways;; Fermentation; Purine-Degradation;; CARBOXYLATES-DEG; Super-Pathways;; Pyruvate-Acetate-Fermentation;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Acetate-Formation; Pyruvate-Ethanol-Fermentation;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Acetyl-CoA-Butyrate; Super-Pathways;; Acetate-Formation;; GALLATE-DEG;; Sulfoacetaldehyde-Degradation;; LYSINE-DEG; Super-Pathways;;
pfam_acc PF01515;
pfam_desc Phosphate acetyl/butaryl transferase;
pfam_id PTA_PTB;
pfam_target db:Pfam-A.hmm|PF01515.19 evalue:8.6e-96 score:320.2 best_domain_score:320.0 name:PTA_PTB;
sprot_desc Phosphate acetyltransferase;
sprot_id sp|Q59330|PTAS_THETC;
sprot_target db:uniprot_sprot|sp|Q59330|PTAS_THETC 1 312 evalue:4.0e-61 qcov:100.00 identity:42.60;
tigrfam_acc TIGR00651;
tigrfam_desc phosphate acetyltransferase;
tigrfam_mainrole Energy metabolism;
tigrfam_name pta;
tigrfam_sub1role Fermentation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00651 evalue:7.1e-94 score:313.8 best_domain_score:313.6 name:TIGR00651;
15298 14792 CDS
ID metaerg.pl|03991
allec_ids 2.7.7.3;
allgo_ids GO:0003824; GO:0009058; GO:0005737; GO:0005524; GO:0004595; GO:0015937;
allko_ids K00954;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000016.1_90 1 168 evalue:5.9e-60 qcov:100.00 identity:68.50;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-4221; COA-PWY; PANTOSYN-PWY; PWY-4242;
metacyc_pathway_name superpathway of coenzyme A biosynthesis II (plants);; coenzyme A biosynthesis I (prokaryotic);; superpathway of coenzyme A biosynthesis I (bacteria);; ;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis;; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; ;
pfam_acc PF01467;
pfam_desc Cytidylyltransferase-like;
pfam_id CTP_transf_like;
pfam_target db:Pfam-A.hmm|PF01467.26 evalue:2.1e-18 score:66.1 best_domain_score:65.9 name:CTP_transf_like;
sprot_desc Phosphopantetheine adenylyltransferase;
sprot_id sp|Q3SLS2|COAD_THIDA;
sprot_target db:uniprot_sprot|sp|Q3SLS2|COAD_THIDA 7 162 evalue:2.2e-45 qcov:92.90 identity:56.40;
tigrfam_acc TIGR00125; TIGR01510;
tigrfam_desc cytidyltransferase-like domain; pantetheine-phosphate adenylyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cyt_tran_rel; coaD_prev_kdtB;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00125 evalue:5e-14 score:51.4 best_domain_score:50.7 name:TIGR00125; db:TIGRFAMs.hmm|TIGR01510 evalue:3.5e-51 score:172.4 best_domain_score:172.3 name:TIGR01510;
15879 15295 CDS
ID metaerg.pl|03992
allec_ids 2.1.1.171;
allgo_ids GO:0008168; GO:0052913; GO:0003676;
allko_ids K08316;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89393.1 3 173 evalue:3.0e-52 qcov:88.10 identity:64.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF03602; PF05175;
pfam_desc Conserved hypothetical protein 95; Methyltransferase small domain;
pfam_id Cons_hypoth95; MTS;
pfam_target db:Pfam-A.hmm|PF03602.15 evalue:1.2e-41 score:141.6 best_domain_score:141.3 name:Cons_hypoth95; db:Pfam-A.hmm|PF05175.14 evalue:1.6e-07 score:30.3 best_domain_score:29.9 name:MTS;
sprot_desc Ribosomal RNA small subunit methyltransferase D;
sprot_id sp|P0ADY0|RSMD_ECOL6;
sprot_target db:uniprot_sprot|sp|P0ADY0|RSMD_ECOL6 3 156 evalue:1.6e-20 qcov:79.40 identity:38.20;
tigrfam_acc TIGR00095;
tigrfam_desc 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00095;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00095 evalue:4.9e-37 score:126.6 best_domain_score:126.1 name:TIGR00095;
17646 15883 CDS
ID metaerg.pl|03993
allec_ids 3.1.-.-;
allgo_ids GO:0003676; GO:0008409; GO:0003677; GO:0006310; GO:0006281;
allko_ids K07462;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000066.1_40 35 583 evalue:1.8e-172 qcov:93.50 identity:57.50;
kegg_pathway_id 03440; 03430; 03410;
kegg_pathway_name Homologous recombination; Mismatch repair; Base excision repair;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01368; PF02272; PF17768;
pfam_desc DHH family; DHHA1 domain; RecJ OB domain;
pfam_id DHH; DHHA1; RecJ_OB;
pfam_target db:Pfam-A.hmm|PF01368.20 evalue:6e-12 score:44.9 best_domain_score:44.1 name:DHH; db:Pfam-A.hmm|PF02272.19 evalue:1.7e-14 score:53.6 best_domain_score:52.7 name:DHHA1; db:Pfam-A.hmm|PF17768.1 evalue:5.9e-25 score:86.9 best_domain_score:86.2 name:RecJ_OB;
sprot_desc Single-stranded-DNA-specific exonuclease RecJ;
sprot_id sp|O32044|RECJ_BACSU;
sprot_target db:uniprot_sprot|sp|O32044|RECJ_BACSU 18 580 evalue:1.2e-93 qcov:95.90 identity:36.30;
tigrfam_acc TIGR00644;
tigrfam_desc single-stranded-DNA-specific exonuclease RecJ;
tigrfam_mainrole DNA metabolism;
tigrfam_name recJ;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00644 evalue:6.7e-147 score:489.2 best_domain_score:489.0 name:TIGR00644;
18479 17643 CDS
ID metaerg.pl|03994
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000066.1_39 9 275 evalue:2.4e-50 qcov:96.00 identity:48.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
20344 18506 CDS
ID metaerg.pl|03995
allec_ids 2.7.7.-;
allgo_ids GO:0016779;
allko_ids K02316;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06648.1 1 612 evalue:2.6e-182 qcov:100.00 identity:54.40;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-882; THISYN-PWY; PWY-5354; PWY-6476; PWY4FS-4; PHOSLIPSYN2-PWY;
metacyc_pathway_name L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of thiamine diphosphate biosynthesis I;; ; cytidylyl molybdenum cofactor biosynthesis;; phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);;
metacyc_pathway_type Ascorbate-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;; ; Cofactor-Biosynthesis;; PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;;
pfam_acc PF10410; PF13155; PF13362; PF13662; PF08275; PF01807;
pfam_desc DnaB-helicase binding domain of primase; Toprim-like; Toprim domain; Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger;
pfam_id DnaB_bind; Toprim_2; Toprim_3; Toprim_4; Toprim_N; zf-CHC2;
pfam_target db:Pfam-A.hmm|PF10410.9 evalue:2.3e-09 score:36.5 best_domain_score:34.8 name:DnaB_bind; db:Pfam-A.hmm|PF13155.6 evalue:4.3e-15 score:55.1 best_domain_score:54.3 name:Toprim_2; db:Pfam-A.hmm|PF13362.6 evalue:1.2e-08 score:34.4 best_domain_score:30.1 name:Toprim_3; db:Pfam-A.hmm|PF13662.6 evalue:1.3e-15 score:56.9 best_domain_score:56.0 name:Toprim_4; db:Pfam-A.hmm|PF08275.11 evalue:5.3e-37 score:126.0 best_domain_score:125.0 name:Toprim_N; db:Pfam-A.hmm|PF01807.20 evalue:2.9e-33 score:112.8 best_domain_score:111.9 name:zf-CHC2;
tigrfam_acc TIGR01391;
tigrfam_desc DNA primase;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnaG;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01391 evalue:2.9e-127 score:424.1 best_domain_score:423.8 name:TIGR01391;
22752 20341 CDS
ID metaerg.pl|03996
allec_ids 3.1.-.-;
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0016887; GO:0004519; GO:0045910;
allko_ids K07456;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000324.1_58 1 799 evalue:6.4e-197 qcov:99.50 identity:52.80;
kegg_pathway_id 03430;
kegg_pathway_name Mismatch repair;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00488; PF01713;
pfam_desc MutS domain V; Smr domain;
pfam_id MutS_V; Smr;
pfam_target db:Pfam-A.hmm|PF00488.21 evalue:1.9e-33 score:115.3 best_domain_score:114.7 name:MutS_V; db:Pfam-A.hmm|PF01713.21 evalue:9.5e-13 score:47.6 best_domain_score:47.6 name:Smr;
sprot_desc Endonuclease MutS2;
sprot_id sp|C1A4A9|MUTS2_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A4A9|MUTS2_GEMAT 1 800 evalue:1.7e-132 qcov:99.60 identity:40.60;
23221 22757 CDS
ID metaerg.pl|03997
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002313925;
genomedb_acc GCA_002313925.1;
genomedb_target db:genomedb|GCA_002313925.1|DCAZ01000018.1_44 12 151 evalue:4.1e-36 qcov:90.90 identity:59.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF09424;
pfam_desc Yqey-like protein;
pfam_id YqeY;
pfam_target db:Pfam-A.hmm|PF09424.10 evalue:1.1e-32 score:112.3 best_domain_score:112.0 name:YqeY;
23728 23387 CDS
ID metaerg.pl|03998
allgo_ids GO:0003824;
allko_ids K02503;
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Helcococcaceae;g__Anaerococcus;s__Anaerococcus prevotii;
genomedb_acc GCF_000024105.1;
genomedb_target db:genomedb|GCF_000024105.1|WP_015778090.1 1 113 evalue:1.5e-35 qcov:100.00 identity:58.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF11969; PF01230;
pfam_desc Scavenger mRNA decapping enzyme C-term binding; HIT domain;
pfam_id DcpS_C; HIT;
pfam_target db:Pfam-A.hmm|PF11969.8 evalue:1e-23 score:83.2 best_domain_score:83.0 name:DcpS_C; db:Pfam-A.hmm|PF01230.23 evalue:4.3e-26 score:90.8 best_domain_score:90.6 name:HIT;
sprot_desc Uncharacterized HIT-like protein aq_141;
sprot_id sp|O66536|YHIT_AQUAE;
sprot_target db:uniprot_sprot|sp|O66536|YHIT_AQUAE 2 113 evalue:2.3e-30 qcov:99.10 identity:46.20;
23912 24355 CDS
ID metaerg.pl|03999
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
25223 24342 CDS
ID metaerg.pl|04000
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000066.1_33 8 289 evalue:5.8e-63 qcov:96.20 identity:49.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF03602; PF02475; PF05175; PF01135; PF06325;
pfam_desc Conserved hypothetical protein 95; Met-10+ like-protein; Methyltransferase small domain; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Ribosomal protein L11 methyltransferase (PrmA);
pfam_id Cons_hypoth95; Met_10; MTS; PCMT; PrmA;
pfam_target db:Pfam-A.hmm|PF03602.15 evalue:7e-05 score:21.8 best_domain_score:20.2 name:Cons_hypoth95; db:Pfam-A.hmm|PF02475.16 evalue:7.1e-08 score:31.7 best_domain_score:30.9 name:Met_10; db:Pfam-A.hmm|PF05175.14 evalue:4.3e-06 score:25.6 best_domain_score:25.0 name:MTS; db:Pfam-A.hmm|PF01135.19 evalue:2e-06 score:26.9 best_domain_score:26.4 name:PCMT; db:Pfam-A.hmm|PF06325.13 evalue:6.3e-62 score:208.9 best_domain_score:208.3 name:PrmA;
26395 25220 CDS
ID metaerg.pl|04001
allgo_ids GO:0031072; GO:0051082; GO:0005737; GO:0005524; GO:0008270; GO:0006260; GO:0006457; GO:0009408;
allko_ids K09584; K00428; K00122; K09510; K03686;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000066.1_32 1 390 evalue:5.4e-133 qcov:99.70 identity:60.80;
kegg_pathway_id 00630; 00680;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Methane metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00226; PF01556; PF00684;
pfam_desc DnaJ domain; DnaJ C terminal domain; DnaJ central domain;
pfam_id DnaJ; DnaJ_C; DnaJ_CXXCXGXG;
pfam_target db:Pfam-A.hmm|PF00226.31 evalue:1.1e-28 score:98.3 best_domain_score:97.5 name:DnaJ; db:Pfam-A.hmm|PF01556.18 evalue:1.2e-37 score:128.5 best_domain_score:128.2 name:DnaJ_C; db:Pfam-A.hmm|PF00684.19 evalue:5.8e-13 score:48.2 best_domain_score:47.3 name:DnaJ_CXXCXGXG;
sprot_desc Chaperone protein DnaJ;
sprot_id sp|B3EE31|DNAJ_CHLL2;
sprot_target db:uniprot_sprot|sp|B3EE31|DNAJ_CHLL2 3 390 evalue:3.7e-80 qcov:99.20 identity:42.30;
tigrfam_acc TIGR02349;
tigrfam_desc chaperone protein DnaJ;
tigrfam_name DnaJ_bact;
tigrfam_target db:TIGRFAMs.hmm|TIGR02349 evalue:1.2e-125 score:418.7 best_domain_score:418.6 name:TIGR02349;
27547 26462 CDS
ID metaerg.pl|04002
allgo_ids GO:0003677; GO:0006355; GO:0045892;
allko_ids K03705;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_38 15 361 evalue:5.2e-122 qcov:96.10 identity:68.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF01628;
pfam_desc HrcA protein C terminal domain;
pfam_id HrcA;
pfam_target db:Pfam-A.hmm|PF01628.21 evalue:5.4e-43 score:146.7 best_domain_score:145.9 name:HrcA;
sprot_desc Heat-inducible transcription repressor HrcA;
sprot_id sp|B3EPC5|HRCA_CHLPB;
sprot_target db:uniprot_sprot|sp|B3EPC5|HRCA_CHLPB 17 360 evalue:1.1e-57 qcov:95.30 identity:37.00;
tigrfam_acc TIGR00331;
tigrfam_desc heat-inducible transcription repressor HrcA;
tigrfam_mainrole Regulatory functions;
tigrfam_name hrcA;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00331 evalue:9.7e-81 score:271.1 best_domain_score:270.9 name:TIGR00331;
28724 27561 CDS
ID metaerg.pl|04003
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000012.1_119 49 379 evalue:7.5e-26 qcov:85.50 identity:30.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
29851 28691 CDS
ID metaerg.pl|04004
allgo_ids GO:0009294;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Cupriavidus;s__Cupriavidus nantongensis;
genomedb_acc GCF_001598055.1;
genomedb_target db:genomedb|GCF_001598055.1|WP_062795930.1 3 374 evalue:3.2e-61 qcov:96.40 identity:40.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF02481; PF17782;
pfam_desc DNA recombination-mediator protein A; DprA winged helix domain;
pfam_id DNA_processg_A; DprA_WH;
pfam_target db:Pfam-A.hmm|PF02481.15 evalue:1.8e-72 score:242.3 best_domain_score:241.9 name:DNA_processg_A; db:Pfam-A.hmm|PF17782.1 evalue:9.7e-09 score:34.5 best_domain_score:32.6 name:DprA_WH;
tigrfam_acc TIGR00732;
tigrfam_desc DNA protecting protein DprA;
tigrfam_mainrole Cellular processes;
tigrfam_name dprA;
tigrfam_sub1role DNA transformation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00732 evalue:2.9e-64 score:215.4 best_domain_score:215.1 name:TIGR00732;
30951 29827 CDS
ID metaerg.pl|04005
allec_ids 3.6.5.-;
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0000287; GO:0042254;
allko_ids K03979;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_35 1 327 evalue:5.0e-128 qcov:87.40 identity:69.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF02421; PF01018; PF01926;
pfam_desc Ferrous iron transport protein B; GTP1/OBG; 50S ribosome-binding GTPase;
pfam_id FeoB_N; GTP1_OBG; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF02421.18 evalue:8.9e-10 score:37.5 best_domain_score:36.9 name:FeoB_N; db:Pfam-A.hmm|PF01018.22 evalue:1.5e-55 score:186.3 best_domain_score:185.7 name:GTP1_OBG; db:Pfam-A.hmm|PF01926.23 evalue:8.6e-26 score:89.5 best_domain_score:89.0 name:MMR_HSR1;
sprot_desc GTPase Obg;
sprot_id sp|Q022G3|OBG_SOLUE;
sprot_target db:uniprot_sprot|sp|Q022G3|OBG_SOLUE 1 319 evalue:1.0e-95 qcov:85.30 identity:57.20;
tigrfam_acc TIGR02729;
tigrfam_desc Obg family GTPase CgtA;
tigrfam_mainrole Protein synthesis;
tigrfam_name Obg_CgtA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02729 evalue:2.7e-128 score:426.8 best_domain_score:426.6 name:TIGR02729;
32677 30965 CDS
ID metaerg.pl|04006
allgo_ids GO:0051920; GO:0055114;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__AG11;s__AG11 sp003223455;
genomedb_acc GCA_003223455.1;
genomedb_target db:genomedb|GCA_003223455.1|PYP75249.1 10 533 evalue:4.8e-106 qcov:91.90 identity:42.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF06089; PF02627;
pfam_desc L-asparaginase II; Carboxymuconolactone decarboxylase family;
pfam_id Asparaginase_II; CMD;
pfam_target db:Pfam-A.hmm|PF06089.12 evalue:3.6e-109 score:363.9 best_domain_score:363.6 name:Asparaginase_II; db:Pfam-A.hmm|PF02627.20 evalue:2e-11 score:43.0 best_domain_score:29.3 name:CMD;
33632 32769 CDS
ID metaerg.pl|04007
allgo_ids GO:0016021; GO:0005886;
allko_ids K07090;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89485.1 4 277 evalue:4.1e-45 qcov:95.50 identity:43.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF01925;
pfam_desc Sulfite exporter TauE/SafE;
pfam_id TauE;
pfam_target db:Pfam-A.hmm|PF01925.19 evalue:7e-46 score:156.0 best_domain_score:155.8 name:TauE;
sprot_desc Probable membrane transporter protein YunE;
sprot_id sp|O32134|YUNE_BACSU;
sprot_target db:uniprot_sprot|sp|O32134|YUNE_BACSU 4 278 evalue:7.3e-09 qcov:95.80 identity:24.50;
tm_num 7;
33632 32769 transmembrane_helix
ID metaerg.pl|04008
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i32787-32891o32934-32993i33027-33095o33255-33323i33342-33410o33438-33506i33540-33593o;
35384 33681 CDS
ID metaerg.pl|04009
allec_ids 3.4.21.-;
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_32 4 550 evalue:6.4e-159 qcov:96.50 identity:53.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00595; PF13180; PF17820; PF03572;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Peptidase family S41;
pfam_id PDZ; PDZ_2; PDZ_6; Peptidase_S41;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:1.1e-11 score:44.1 best_domain_score:43.2 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:2.8e-11 score:42.8 best_domain_score:41.5 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:1.9e-15 score:55.7 best_domain_score:54.0 name:PDZ_6; db:Pfam-A.hmm|PF03572.18 evalue:1.3e-45 score:154.2 best_domain_score:153.5 name:Peptidase_S41;
sp YES;
tigrfam_acc TIGR00225;
tigrfam_desc C-terminal processing peptidase;
tigrfam_mainrole Protein fate;
tigrfam_name prc;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00225 evalue:6.2e-89 score:297.5 best_domain_score:297.0 name:TIGR00225;
tm_num 1;
33681 33770 signal_peptide
ID metaerg.pl|04010
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
35384 33681 transmembrane_helix
ID metaerg.pl|04011
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i33699-33758o;
36115 35381 CDS
ID metaerg.pl|04012
allec_ids 2.7.4.9;
allgo_ids GO:0005524; GO:0004798; GO:0006233; GO:0006235;
allko_ids K00943;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD48861.1 9 225 evalue:2.5e-59 qcov:88.90 identity:54.80;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY0-166; P1-PWY; PWY-6545;
metacyc_pathway_name superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);; ; pyrimidine deoxyribonucleotides de novo biosynthesis III;;
metacyc_pathway_type Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;; ; Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;;
pfam_acc PF13521; PF02223;
pfam_desc AAA domain; Thymidylate kinase;
pfam_id AAA_28; Thymidylate_kin;
pfam_target db:Pfam-A.hmm|PF13521.6 evalue:2.3e-06 score:27.2 best_domain_score:26.8 name:AAA_28; db:Pfam-A.hmm|PF02223.17 evalue:2.4e-39 score:134.2 best_domain_score:134.0 name:Thymidylate_kin;
sprot_desc Thymidylate kinase;
sprot_id sp|B8J2G0|KTHY_DESDA;
sprot_target db:uniprot_sprot|sp|B8J2G0|KTHY_DESDA 20 217 evalue:2.3e-40 qcov:81.10 identity:46.80;
tigrfam_acc TIGR00041;
tigrfam_desc dTMP kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name DTMP_kinase;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00041 evalue:1.3e-44 score:151.4 best_domain_score:151.1 name:TIGR00041;
37439 36120 CDS
ID metaerg.pl|04013
allec_ids 5.5.1.4;
allgo_ids GO:0004512; GO:0006021; GO:0008654; GO:0005737;
allko_ids K01858;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2982;s__UBA2982 sp002347035;
genomedb_acc GCA_002347035.1;
genomedb_target db:genomedb|GCA_002347035.1|DEAM01000031.1_29 1 437 evalue:9.2e-206 qcov:99.50 identity:78.30;
kegg_pathway_id 00521; 00562;
kegg_pathway_name Streptomycin biosynthesis; Inositol phosphate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-2301;
metacyc_pathway_name myo-inositol biosynthesis;;
metacyc_pathway_type Cyclitols-Biosynthesis;;
pfam_acc PF01658; PF07994;
pfam_desc Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase;
pfam_id Inos-1-P_synth; NAD_binding_5;
pfam_target db:Pfam-A.hmm|PF01658.17 evalue:6.5e-32 score:109.3 best_domain_score:108.8 name:Inos-1-P_synth; db:Pfam-A.hmm|PF07994.12 evalue:3e-90 score:302.1 best_domain_score:301.9 name:NAD_binding_5;
sp YES;
sprot_desc Inositol-3-phosphate synthase;
sprot_id sp|O97477|INO1_DROME;
sprot_target db:uniprot_sprot|sp|O97477|INO1_DROME 7 434 evalue:4.7e-47 qcov:97.50 identity:30.10;
tm_num 1;
36120 36221 signal_peptide
ID metaerg.pl|04014
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
37439 36120 transmembrane_helix
ID metaerg.pl|04015
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i36156-36224o;
38109 37417 CDS
ID metaerg.pl|04016
allec_ids 2.7.8.39;
allgo_ids GO:0008654; GO:0016020; GO:0016780; GO:0016021;
allko_ids K00998; K17884;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000013.1_18 1 209 evalue:1.0e-75 qcov:90.90 identity:68.90;
kegg_pathway_id 00260; 00564;
kegg_pathway_name Glycine, serine and threonine metabolism; Glycerophospholipid metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF01066;
pfam_desc CDP-alcohol phosphatidyltransferase;
pfam_id CDP-OH_P_transf;
pfam_target db:Pfam-A.hmm|PF01066.21 evalue:6e-15 score:55.0 best_domain_score:52.1 name:CDP-OH_P_transf;
sprot_desc Archaetidylinositol phosphate synthase;
sprot_id sp|O27726|AIPS_METTH;
sprot_target db:uniprot_sprot|sp|O27726|AIPS_METTH 4 199 evalue:9.0e-18 qcov:85.20 identity:32.10;
tm_num 5;
38109 37417 transmembrane_helix
ID metaerg.pl|04017
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology o37489-37557i37576-37635o37693-37746i37765-37818o37924-37992i;
39435 38389 CDS
ID metaerg.pl|04018
allec_ids 2.1.1.297; 2.1.1.-;
allgo_ids GO:0008168; GO:0003676; GO:0102559; GO:0036009; GO:0018364;
allko_ids K02493;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_28 21 302 evalue:3.2e-76 qcov:81.00 identity:56.40;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-6151; PWY-5209; PWY-5855; PWY-5857; PWY-6303; METH-ACETATE-PWY; PWY-6154; PWY-6424; UBISYN-PWY; PWY-6142; PWY-5856; PWY-5116; PWY-1581; CO2FORM-PWY; PWY-6519; PWY-5773; PWY-5328; METHIONINE-DEG1-PWY; PWY-6427; PWY-6395; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-6292; PWY-5987; PWY-5479; PWY-5467; PWY-6477; CODH-PWY; PWY-6442; PWY-6575; PWY-4021; PWY-5041; PWY-6153; ALL-CHORISMATE-PWY; PWY-3542; PWY-1061; PWY-5876; PWY-5864; PWY-5975; PWY-5729; PWY-6113; PWY-5305; PWYG-321; PWY-1422;
metacyc_pathway_name S-adenosyl-L-methionine cycle I;; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; methanogenesis from acetate;; autoinducer AI-2 biosynthesis II (Vibrio);; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; xanthohumol biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; gramine biosynthesis;; gibberellin inactivation II (methylation);; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; autoinducer AI-2 biosynthesis I;; superpathway of chorismate metabolism;; choline biosynthesis II;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; vitamin E biosynthesis (tocopherols);;
metacyc_pathway_type S-adenosyl-L-methionine-cycle; Super-Pathways;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; METHANOGENESIS;; Autoinducer-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; CYSTEINE-SYN; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Autotrophic-CO2-Fixation;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Autoinducer-Biosynthesis;; Super-Pathways;; Choline-Biosynthesis;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Quinone-Biosynthesis; Vitamin-Biosynthesis;;
pfam_acc PF03602; PF08241; PF12847; PF13649; PF13847; PF05175; PF06325; PF17827; PF01170;
pfam_desc Conserved hypothetical protein 95; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain; Ribosomal protein L11 methyltransferase (PrmA); PrmC N-terminal domain; Putative RNA methylase family UPF0020;
pfam_id Cons_hypoth95; Methyltransf_11; Methyltransf_18; Methyltransf_25; Methyltransf_31; MTS; PrmA; PrmC_N; UPF0020;
pfam_target db:Pfam-A.hmm|PF03602.15 evalue:5.9e-06 score:25.3 best_domain_score:24.5 name:Cons_hypoth95; db:Pfam-A.hmm|PF08241.12 evalue:5.6e-09 score:35.8 best_domain_score:32.5 name:Methyltransf_11; db:Pfam-A.hmm|PF12847.7 evalue:1.9e-06 score:27.1 best_domain_score:26.5 name:Methyltransf_18; db:Pfam-A.hmm|PF13649.6 evalue:1e-11 score:44.6 best_domain_score:43.1 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:9.7e-15 score:53.9 best_domain_score:53.3 name:Methyltransf_31; db:Pfam-A.hmm|PF05175.14 evalue:2.6e-13 score:49.1 best_domain_score:47.9 name:MTS; db:Pfam-A.hmm|PF06325.13 evalue:4.5e-08 score:32.1 best_domain_score:31.5 name:PrmA; db:Pfam-A.hmm|PF17827.1 evalue:1.6e-16 score:59.9 best_domain_score:59.9 name:PrmC_N; db:Pfam-A.hmm|PF01170.18 evalue:6.4e-06 score:25.2 best_domain_score:24.6 name:UPF0020;
sprot_desc Release factor glutamine methyltransferase;
sprot_id sp|Q748B2|PRMC_GEOSL;
sprot_target db:uniprot_sprot|sp|Q748B2|PRMC_GEOSL 16 306 evalue:2.9e-52 qcov:83.60 identity:41.20;
tigrfam_acc TIGR00536; TIGR03534;
tigrfam_desc methyltransferase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific;
tigrfam_mainrole Protein fate; Protein fate;
tigrfam_name hemK_fam; RF_mod_PrmC;
tigrfam_sub1role Protein modification and repair; Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00536 evalue:4.7e-63 score:212.1 best_domain_score:211.7 name:TIGR00536; db:TIGRFAMs.hmm|TIGR03534 evalue:1.1e-75 score:253.6 best_domain_score:253.3 name:TIGR03534;
40526 39432 CDS
ID metaerg.pl|04019
allgo_ids GO:0006415; GO:0005737; GO:0016149;
allko_ids K02835;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_27 1 361 evalue:1.4e-130 qcov:99.20 identity:70.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF03462; PF00472;
pfam_desc PCRF domain; RF-1 domain;
pfam_id PCRF; RF-1;
pfam_target db:Pfam-A.hmm|PF03462.18 evalue:5.8e-64 score:214.7 best_domain_score:213.2 name:PCRF; db:Pfam-A.hmm|PF00472.20 evalue:5.2e-43 score:144.9 best_domain_score:143.8 name:RF-1;
sprot_desc Peptide chain release factor 1;
sprot_id sp|Q2RFW0|RF1_MOOTA;
sprot_target db:uniprot_sprot|sp|Q2RFW0|RF1_MOOTA 10 363 evalue:4.2e-102 qcov:97.30 identity:56.50;
tigrfam_acc TIGR00019;
tigrfam_desc peptide chain release factor 1;
tigrfam_mainrole Protein synthesis;
tigrfam_name prfA;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00019 evalue:2.8e-148 score:492.8 best_domain_score:492.6 name:TIGR00019;
40800 40594 CDS
ID metaerg.pl|04020
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0046872; GO:0019843;
allko_ids K02909;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylothermaceae;g__Methylohalobius;s__Methylohalobius crimeensis;
genomedb_acc GCF_000421465.1;
genomedb_target db:genomedb|GCF_000421465.1|WP_022949134.1 1 68 evalue:1.7e-21 qcov:100.00 identity:66.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF01197;
pfam_desc Ribosomal protein L31;
pfam_id Ribosomal_L31;
pfam_target db:Pfam-A.hmm|PF01197.18 evalue:4e-32 score:109.5 best_domain_score:109.3 name:Ribosomal_L31;
sprot_desc 50S ribosomal protein L31;
sprot_id sp|Q2LWU8|RL31_SYNAS;
sprot_target db:uniprot_sprot|sp|Q2LWU8|RL31_SYNAS 1 64 evalue:3.4e-21 qcov:94.10 identity:68.80;
tigrfam_acc TIGR00105;
tigrfam_desc ribosomal protein bL31;
tigrfam_mainrole Protein synthesis;
tigrfam_name L31;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00105 evalue:3.5e-31 score:106.3 best_domain_score:106.1 name:TIGR00105;
41361 40930 CDS
ID metaerg.pl|04021
allgo_ids GO:0006879; GO:0008199;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Marinococcaceae;g__Alteribacillus;s__Alteribacillus bidgolensis;
genomedb_acc GCF_002886255.1;
genomedb_target db:genomedb|GCF_002886255.1|WP_091586138.1 1 138 evalue:1.3e-36 qcov:96.50 identity:58.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00210; PF02915;
pfam_desc Ferritin-like domain; Rubrerythrin;
pfam_id Ferritin; Rubrerythrin;
pfam_target db:Pfam-A.hmm|PF00210.24 evalue:5.8e-21 score:74.2 best_domain_score:74.0 name:Ferritin; db:Pfam-A.hmm|PF02915.17 evalue:1.1e-09 score:38.0 best_domain_score:37.4 name:Rubrerythrin;
43017 41431 CDS
ID metaerg.pl|04022
allgo_ids GO:0006807;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales_A;f__Casp-alpha2;g__Casp-alpha2;s__Casp-alpha2 sp002938075;
genomedb_acc GCA_002938075.1;
genomedb_target db:genomedb|GCA_002938075.1|PPR57670.1 7 506 evalue:3.0e-09 qcov:94.70 identity:27.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00795;
pfam_desc Carbon-nitrogen hydrolase;
pfam_id CN_hydrolase;
pfam_target db:Pfam-A.hmm|PF00795.22 evalue:3.1e-07 score:29.2 best_domain_score:28.4 name:CN_hydrolase;
tm_num 7;
43017 41431 transmembrane_helix
ID metaerg.pl|04023
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i41449-41517o41527-41586i41620-41673o41701-41769i41788-41856o41941-42009i42046-42105o;
43768 43031 CDS
ID metaerg.pl|04024
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_23 27 245 evalue:1.5e-51 qcov:89.40 identity:49.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
tm_num 1;
43768 43031 transmembrane_helix
ID metaerg.pl|04025
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i43091-43159o;
45056 43755 CDS
ID metaerg.pl|04026
allec_ids 5.4.3.8;
allgo_ids GO:0008483; GO:0030170; GO:0005737; GO:0042286; GO:0015995; GO:0006782;
allko_ids K01845;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD48851.1 11 428 evalue:1.0e-164 qcov:96.50 identity:68.50;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-5188; PWY-5918;
metacyc_pathway_name tetrapyrrole biosynthesis I (from glutamate);; superpathay of heme b biosynthesis from glutamate;;
metacyc_pathway_type Tetrapyrrole-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:9e-78 score:260.9 best_domain_score:260.5 name:Aminotran_3;
sprot_desc Glutamate-1-semialdehyde 2,1-aminomutase;
sprot_id sp|Q7V677|GSA_PROMM;
sprot_target db:uniprot_sprot|sp|Q7V677|GSA_PROMM 9 424 evalue:1.4e-144 qcov:96.10 identity:59.40;
tigrfam_acc TIGR00713;
tigrfam_desc glutamate-1-semialdehyde-2,1-aminomutase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemL;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00713 evalue:2.5e-174 score:579.1 best_domain_score:578.8 name:TIGR00713;
46593 45091 CDS
ID metaerg.pl|04027
allec_ids 2.8.4.4; 2.1.1.- 2.8.1.-;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0103039; GO:0018339; GO:0006400;
allko_ids K14441;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06670.1 5 496 evalue:4.0e-181 qcov:98.40 identity:66.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF04055; PF18693; PF00919;
pfam_desc Radical SAM superfamily; TRAM domain; Uncharacterized protein family UPF0004;
pfam_id Radical_SAM; TRAM_2; UPF0004;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:4.8e-25 score:88.1 best_domain_score:86.7 name:Radical_SAM; db:Pfam-A.hmm|PF18693.1 evalue:1.6e-14 score:53.0 best_domain_score:52.1 name:TRAM_2; db:Pfam-A.hmm|PF00919.20 evalue:1.6e-28 score:97.9 best_domain_score:97.2 name:UPF0004;
sprot_desc Ribosomal protein S12 methylthiotransferase RimO;
sprot_id sp|A7H6G8|RIMO_ANADF;
sprot_target db:uniprot_sprot|sp|A7H6G8|RIMO_ANADF 45 500 evalue:9.5e-97 qcov:91.20 identity:44.00;
tigrfam_acc TIGR00089; TIGR01125;
tigrfam_desc radical SAM methylthiotransferase, MiaB/RimO family; ribosomal protein S12 methylthiotransferase RimO;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00089; TIGR01125;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00089 evalue:3.3e-111 score:371.3 best_domain_score:371.1 name:TIGR00089; db:TIGRFAMs.hmm|TIGR01125 evalue:5.3e-130 score:433.5 best_domain_score:433.3 name:TIGR01125;
47367 46639 CDS
ID metaerg.pl|04028
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000012.1_103 27 242 evalue:3.2e-43 qcov:89.30 identity:45.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF09865; PF03548;
pfam_desc Predicted periplasmic protein (DUF2092); Outer membrane lipoprotein carrier protein LolA;
pfam_id DUF2092; LolA;
pfam_target db:Pfam-A.hmm|PF09865.9 evalue:3.6e-06 score:25.7 best_domain_score:18.3 name:DUF2092; db:Pfam-A.hmm|PF03548.15 evalue:5.1e-16 score:58.0 best_domain_score:56.0 name:LolA;
sp YES;
46639 46758 signal_peptide
ID metaerg.pl|04029
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
49817 47454 CDS
ID metaerg.pl|04030
allgo_ids GO:0000166; GO:0003677; GO:0005524;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000066.1_14 1 784 evalue:8.9e-252 qcov:99.60 identity:60.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF13491; PF17854; PF09397; PF01580;
pfam_desc 4TM region of DNA translocase FtsK/SpoIIIE; FtsK alpha domain; Ftsk gamma domain; FtsK/SpoIIIE family;
pfam_id FtsK_4TM; FtsK_alpha; FtsK_gamma; FtsK_SpoIIIE;
pfam_target db:Pfam-A.hmm|PF13491.6 evalue:4.7e-06 score:25.6 best_domain_score:24.5 name:FtsK_4TM; db:Pfam-A.hmm|PF17854.1 evalue:5.2e-30 score:102.8 best_domain_score:102.1 name:FtsK_alpha; db:Pfam-A.hmm|PF09397.10 evalue:1.1e-27 score:94.9 best_domain_score:93.8 name:FtsK_gamma; db:Pfam-A.hmm|PF01580.18 evalue:2.1e-58 score:196.8 best_domain_score:156.4 name:FtsK_SpoIIIE;
tm_num 4;
49817 47454 transmembrane_helix
ID metaerg.pl|04031
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i47487-47555o47625-47693i47730-47798o47841-47909i;
50607 49870 CDS
ID metaerg.pl|04032
allec_ids 3.1.3.71;
allgo_ids GO:0000287; GO:0050532;
allko_ids K05979;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000066.1_13 1 241 evalue:4.8e-63 qcov:98.40 identity:54.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id P261-PWY;
metacyc_pathway_name coenzyme M biosynthesis I;;
metacyc_pathway_type Coenzyme-M-Biosynthesis;;
pfam_acc PF04029;
pfam_desc 2-phosphosulpholactate phosphatase;
pfam_id 2-ph_phosp;
pfam_target db:Pfam-A.hmm|PF04029.14 evalue:5.3e-70 score:234.3 best_domain_score:234.2 name:2-ph_phosp;
sprot_desc Probable 2-phosphosulfolactate phosphatase;
sprot_id sp|Q8R8M3|COMB_CALS4;
sprot_target db:uniprot_sprot|sp|Q8R8M3|COMB_CALS4 1 243 evalue:3.5e-36 qcov:99.20 identity:35.90;
51968 50604 CDS
ID metaerg.pl|04033
allec_ids 6.3.4.14;
allgo_ids GO:0005524; GO:0003989; GO:0004075; GO:0046872; GO:0006633; GO:2001295;
allko_ids K01964; K14541; K03416; K01956; K01954; K01968; K01960; K00609; K01958; K08289; K11540; K01966; K01965; K01571; K11541; K01959; K01955; K01457; K01941; K01961;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_18 1 450 evalue:3.9e-199 qcov:99.10 identity:76.00;
kegg_pathway_id 00670; 00230; 00240; 00020; 00280; 00061; 00640; 00253; 00791; 00251; 00252; 00220; 00330; 00620;
kegg_pathway_name One carbon pool by folate; Purine metabolism; Pyrimidine metabolism; Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation; Fatty acid biosynthesis; Propanoate metabolism; Tetracycline biosynthesis; Atrazine degradation; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Arginine and proline metabolism; Pyruvate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY0-1264;
metacyc_pathway_name biotin-carboxyl carrier protein assembly;;
metacyc_pathway_type Lipid-Biosynthesis;;
pfam_acc PF02222; PF02785; PF00289; PF02786; PF07478; PF08443;
pfam_desc ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus; RimK-like ATP-grasp domain;
pfam_id ATP-grasp; Biotin_carb_C; Biotin_carb_N; CPSase_L_D2; Dala_Dala_lig_C; RimK;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:5.8e-08 score:31.7 best_domain_score:30.0 name:ATP-grasp; db:Pfam-A.hmm|PF02785.19 evalue:4.2e-41 score:138.7 best_domain_score:137.3 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:3.1e-47 score:158.9 best_domain_score:155.7 name:Biotin_carb_N; db:Pfam-A.hmm|PF02786.17 evalue:5.5e-81 score:270.3 best_domain_score:269.2 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:6.9e-11 score:41.3 best_domain_score:40.3 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF08443.11 evalue:0.00011 score:21.2 best_domain_score:10.4 name:RimK;
sprot_desc Biotin carboxylase;
sprot_id sp|Q06862|ACCC_NOSS1;
sprot_target db:uniprot_sprot|sp|Q06862|ACCC_NOSS1 2 442 evalue:5.0e-153 qcov:97.10 identity:59.90;
tigrfam_acc TIGR00514;
tigrfam_desc acetyl-CoA carboxylase, biotin carboxylase subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accC;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00514 evalue:3e-218 score:724.3 best_domain_score:724.0 name:TIGR00514;
52562 52044 CDS
ID metaerg.pl|04034
allko_ids K01959; K01571; K01965; K00382; K01960; K00658;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_17 1 171 evalue:5.6e-42 qcov:99.40 identity:59.10;
kegg_pathway_id 00252; 00620; 00330; 00640; 00280; 00310; 00010; 00020; 00260;
kegg_pathway_name Alanine and aspartate metabolism; Pyruvate metabolism; Arginine and proline metabolism; Propanoate metabolism; Valine, leucine and isoleucine degradation; Lysine degradation; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00364; PF13533;
pfam_desc Biotin-requiring enzyme; Biotin-lipoyl like;
pfam_id Biotin_lipoyl; Biotin_lipoyl_2;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:6.4e-24 score:82.8 best_domain_score:82.3 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:9.7e-08 score:31.0 best_domain_score:19.8 name:Biotin_lipoyl_2;
tigrfam_acc TIGR00531;
tigrfam_desc acetyl-CoA carboxylase, biotin carboxyl carrier protein;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name BCCP;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00531 evalue:1.3e-45 score:154.8 best_domain_score:153.2 name:TIGR00531;
53122 52562 CDS
ID metaerg.pl|04035
allgo_ids GO:0003746; GO:0006414; GO:0005737;
allko_ids K02356;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD48844.1 1 186 evalue:4.0e-86 qcov:100.00 identity:83.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF01132; PF08207; PF09285;
pfam_desc Elongation factor P (EF-P) OB domain; Elongation factor P (EF-P) KOW-like domain; Elongation factor P, C-terminal;
pfam_id EFP; EFP_N; Elong-fact-P_C;
pfam_target db:Pfam-A.hmm|PF01132.20 evalue:2.6e-19 score:68.3 best_domain_score:67.3 name:EFP; db:Pfam-A.hmm|PF08207.12 evalue:1.6e-28 score:97.7 best_domain_score:96.6 name:EFP_N; db:Pfam-A.hmm|PF09285.11 evalue:4.1e-25 score:86.5 best_domain_score:85.6 name:Elong-fact-P_C;
sprot_desc Elongation factor P;
sprot_id sp|Q2RI92|EFP_MOOTA;
sprot_target db:uniprot_sprot|sp|Q2RI92|EFP_MOOTA 1 185 evalue:3.6e-57 qcov:99.50 identity:57.30;
tigrfam_acc TIGR00038;
tigrfam_desc translation elongation factor P;
tigrfam_mainrole Protein synthesis;
tigrfam_name efp;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00038 evalue:2e-74 score:248.4 best_domain_score:248.3 name:TIGR00038;
53630 53208 CDS
ID metaerg.pl|04036
allec_ids 4.2.1.10;
allgo_ids GO:0003855; GO:0009073; GO:0009423;
allko_ids K03786;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000066.1_9 1 140 evalue:5.6e-48 qcov:100.00 identity:68.60;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id ALL-CHORISMATE-PWY; PWY-6163; COMPLETE-ARO-PWY; PWY-6165; PWY-2504; ARO-PWY;
metacyc_pathway_name superpathway of chorismate metabolism;; chorismate biosynthesis from 3-dehydroquinate;; superpathway of aromatic amino acid biosynthesis;; chorismate biosynthesis II (archaea);; superpathway of aromatic compound degradation via 3-oxoadipate;; chorismate biosynthesis I;;
metacyc_pathway_type Super-Pathways;; Chorismate-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;;
pfam_acc PF01220;
pfam_desc Dehydroquinase class II;
pfam_id DHquinase_II;
pfam_target db:Pfam-A.hmm|PF01220.19 evalue:4.1e-53 score:178.0 best_domain_score:177.8 name:DHquinase_II;
sprot_desc 3-dehydroquinate dehydratase;
sprot_id sp|A5GR50|AROQ_SYNR3;
sprot_target db:uniprot_sprot|sp|A5GR50|AROQ_SYNR3 1 138 evalue:5.1e-40 qcov:98.60 identity:59.40;
tigrfam_acc TIGR01088;
tigrfam_desc 3-dehydroquinate dehydratase, type II;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name aroQ;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01088 evalue:8.6e-53 score:176.9 best_domain_score:176.8 name:TIGR01088;
55288 53639 CDS
ID metaerg.pl|04037
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_14 1 489 evalue:1.3e-31 qcov:89.10 identity:31.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00515; PF13424; PF13428; PF13432; PF14559; PF07719; PF13174; PF13181;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_12; TPR_14; TPR_16; TPR_19; TPR_2; TPR_6; TPR_8;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:3.6e-07 score:29.0 best_domain_score:16.1 name:TPR_1; db:Pfam-A.hmm|PF13424.6 evalue:1.1e-07 score:31.3 best_domain_score:12.4 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:1.5e-14 score:52.7 best_domain_score:17.3 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:9.8e-09 score:35.0 best_domain_score:18.0 name:TPR_16; db:Pfam-A.hmm|PF14559.6 evalue:1.5e-09 score:37.4 best_domain_score:18.2 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:1.3e-09 score:36.7 best_domain_score:18.5 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:8.3e-07 score:28.5 best_domain_score:15.9 name:TPR_6; db:Pfam-A.hmm|PF13181.6 evalue:7.7e-08 score:31.2 best_domain_score:8.6 name:TPR_8;
55638 57485 CDS
ID metaerg.pl|04038
allgo_ids GO:0003755;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000012.1_96 1 615 evalue:2.1e-139 qcov:100.00 identity:47.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00639; PF13145; PF13616; PF13623; PF13624;
pfam_desc PPIC-type PPIASE domain; PPIC-type PPIASE domain; PPIC-type PPIASE domain; SurA N-terminal domain; SurA N-terminal domain;
pfam_id Rotamase; Rotamase_2; Rotamase_3; SurA_N_2; SurA_N_3;
pfam_target db:Pfam-A.hmm|PF00639.21 evalue:2.1e-20 score:72.7 best_domain_score:55.8 name:Rotamase; db:Pfam-A.hmm|PF13145.6 evalue:1.6e-19 score:70.1 best_domain_score:44.2 name:Rotamase_2; db:Pfam-A.hmm|PF13616.6 evalue:9e-20 score:70.6 best_domain_score:58.2 name:Rotamase_3; db:Pfam-A.hmm|PF13623.6 evalue:7.6e-24 score:83.5 best_domain_score:83.5 name:SurA_N_2; db:Pfam-A.hmm|PF13624.6 evalue:7.5e-23 score:80.3 best_domain_score:80.3 name:SurA_N_3;
sp YES;
tm_num 1;
55638 55745 signal_peptide
ID metaerg.pl|04039
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
55638 57485 transmembrane_helix
ID metaerg.pl|04040
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i55671-55724o;
57962 57705 CDS
ID metaerg.pl|04041
allgo_ids GO:0008565; GO:0015031;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_12 3 82 evalue:5.5e-14 qcov:94.10 identity:65.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF02416;
pfam_desc mttA/Hcf106 family;
pfam_id MttA_Hcf106;
pfam_target db:Pfam-A.hmm|PF02416.16 evalue:1.4e-20 score:71.6 best_domain_score:71.3 name:MttA_Hcf106;
sp YES;
tigrfam_acc TIGR01411;
tigrfam_desc twin arginine-targeting protein translocase, TatA/E family;
tigrfam_mainrole Protein fate;
tigrfam_name tatAE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01411 evalue:5.2e-19 score:66.7 best_domain_score:66.2 name:TIGR01411;
tm_num 1;
57705 57779 signal_peptide
ID metaerg.pl|04042
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
57962 57705 transmembrane_helix
ID metaerg.pl|04043
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology o57717-57770i;
58283 57999 CDS
ID metaerg.pl|04044
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002501085;
genomedb_acc GCA_002501085.1;
genomedb_target db:genomedb|GCA_002501085.1|DLRL01000097.1_29 4 94 evalue:3.8e-24 qcov:96.80 identity:68.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
tm_num 2;
58283 57999 transmembrane_helix
ID metaerg.pl|04045
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i58035-58103o58188-58256i;
59355 58348 CDS
ID metaerg.pl|04046
allec_ids 2.5.1.30;
allgo_ids GO:0008299; GO:0036422; GO:0046872; GO:0016765; GO:0009234;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_10 7 335 evalue:6.3e-114 qcov:98.20 identity:68.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-5807; PWY-5840;
metacyc_pathway_name heptaprenyl diphosphate biosynthesis;; superpathway of menaquinol-7 biosynthesis;;
metacyc_pathway_type Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:6.9e-60 score:201.5 best_domain_score:201.2 name:polyprenyl_synt;
sprot_desc Heptaprenyl diphosphate synthase component 2;
sprot_id sp|P55785|HEPS2_GEOSE;
sprot_target db:uniprot_sprot|sp|P55785|HEPS2_GEOSE 22 333 evalue:2.5e-40 qcov:93.10 identity:34.20;
61408 59396 CDS
ID metaerg.pl|04047
allgo_ids GO:0005515;
allko_ids K01768; K08884; K09667; K09574;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_9 1 670 evalue:1.4e-109 qcov:100.00 identity:39.40;
kegg_pathway_id 00230; 01030;
kegg_pathway_name Purine metabolism; Glycan structures - biosynthesis 1;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF12895; PF01535; PF00515; PF13374; PF13414; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF13174; PF13176; PF13181; PF17874;
pfam_desc Anaphase-promoting complex, cyclosome, subunit 3; PPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; MalT-like TPR region;
pfam_id ANAPC3; PPR; TPR_1; TPR_10; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8; TPR_MalT;
pfam_target db:Pfam-A.hmm|PF12895.7 evalue:2.8e-07 score:29.9 best_domain_score:14.0 name:ANAPC3; db:Pfam-A.hmm|PF01535.20 evalue:4.4e-07 score:29.0 best_domain_score:6.8 name:PPR; db:Pfam-A.hmm|PF00515.28 evalue:1.6e-21 score:74.4 best_domain_score:19.4 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:2.5e-07 score:29.6 best_domain_score:13.8 name:TPR_10; db:Pfam-A.hmm|PF13414.6 evalue:2.1e-10 score:39.3 best_domain_score:10.8 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:1.8e-17 score:62.6 best_domain_score:19.7 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:3e-25 score:86.0 best_domain_score:23.6 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:2e-13 score:50.0 best_domain_score:17.5 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:1.7e-06 score:27.3 best_domain_score:8.9 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:1.2e-18 score:66.6 best_domain_score:17.8 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:3.6e-22 score:75.9 best_domain_score:23.4 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:7.5e-10 score:38.1 best_domain_score:15.3 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:1.9e-18 score:64.3 best_domain_score:17.8 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:1.6e-19 score:67.6 best_domain_score:19.1 name:TPR_8; db:Pfam-A.hmm|PF17874.1 evalue:2.4e-07 score:29.7 best_domain_score:14.3 name:TPR_MalT;
tigrfam_acc TIGR00756;
tigrfam_desc pentatricopeptide repeat domain;
tigrfam_name PPR;
tigrfam_target db:TIGRFAMs.hmm|TIGR00756 evalue:4.6e-05 score:22.5 best_domain_score:6.2 name:TIGR00756;
62460 61405 CDS
ID metaerg.pl|04048
allec_ids 2.1.2.5;
allgo_ids GO:0005542; GO:0016740; GO:0005737; GO:0030272; GO:0030409; GO:0019556; GO:0019557; GO:0035999;
allko_ids K00603; K01746; K03770; K13990;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_8 1 349 evalue:2.9e-85 qcov:99.40 identity:52.70;
kegg_pathway_id 00670; 00340;
kegg_pathway_name One carbon pool by folate; Histidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-5030;
metacyc_pathway_name L-histidine degradation III;;
metacyc_pathway_type HISTIDINE-DEG;;
pfam_acc PF02971; PF07837;
pfam_desc Formiminotransferase domain; Formiminotransferase domain, N-terminal subdomain;
pfam_id FTCD; FTCD_N;
pfam_target db:Pfam-A.hmm|PF02971.14 evalue:9.9e-09 score:34.6 best_domain_score:33.9 name:FTCD; db:Pfam-A.hmm|PF07837.12 evalue:2.3e-50 score:170.1 best_domain_score:169.4 name:FTCD_N;
sprot_desc Glutamate formimidoyltransferase;
sprot_id sp|Q99XR4|GLFT_STRP1;
sprot_target db:uniprot_sprot|sp|Q99XR4|GLFT_STRP1 1 273 evalue:3.1e-41 qcov:77.80 identity:34.50;
tigrfam_acc TIGR02024;
tigrfam_desc glutamate formiminotransferase;
tigrfam_mainrole Energy metabolism;
tigrfam_name FtcD;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR02024 evalue:8.7e-67 score:224.3 best_domain_score:224.1 name:TIGR02024;
63704 62544 CDS
ID metaerg.pl|04049
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000131.1_7 10 378 evalue:2.4e-117 qcov:95.60 identity:55.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
sp YES;
62544 62618 lipoprotein_signal_peptide
ID metaerg.pl|04050
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
67209 63949 CDS
ID metaerg.pl|04051
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002501085;
genomedb_acc GCA_002501085.1;
genomedb_target db:genomedb|GCA_002501085.1|DLRL01000082.1_2 43 1072 evalue:5.0e-221 qcov:94.80 identity:44.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
sp YES;
63949 64017 signal_peptide
ID metaerg.pl|04052
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
68024 67206 CDS
ID metaerg.pl|04053
allgo_ids GO:0016021; GO:0005887; GO:0033281; GO:0008320; GO:0043953;
allko_ids K03118;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__GCA-2718595;s__GCA-2718595 sp002718595;
genomedb_acc GCA_002718595.1;
genomedb_target db:genomedb|GCA_002718595.1|MBI70444.1 10 271 evalue:9.8e-73 qcov:96.30 identity:56.10;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00902;
pfam_desc Sec-independent protein translocase protein (TatC);
pfam_id TatC;
pfam_target db:Pfam-A.hmm|PF00902.18 evalue:1.5e-60 score:203.8 best_domain_score:203.6 name:TatC;
sprot_desc Sec-independent protein translocase protein TatC;
sprot_id sp|Q3ADS0|TATC_CARHZ;
sprot_target db:uniprot_sprot|sp|Q3ADS0|TATC_CARHZ 12 251 evalue:3.4e-40 qcov:88.20 identity:39.00;
tigrfam_acc TIGR00945;
tigrfam_desc twin arginine-targeting protein translocase TatC;
tigrfam_mainrole Protein fate;
tigrfam_name tatC;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00945 evalue:1.7e-60 score:203.8 best_domain_score:203.6 name:TIGR00945;
tm_num 6;
68024 67206 transmembrane_helix
ID metaerg.pl|04054
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i67281-67349o67443-67511i67545-67613o67704-67772i67809-67862o67872-67931i;
68539 68042 CDS
ID metaerg.pl|04055
allgo_ids GO:0005524; GO:0003677; GO:0008270; GO:0045892;
allko_ids K00527; K07738;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06688.1 1 165 evalue:1.6e-57 qcov:100.00 identity:67.30;
kegg_pathway_id 00240; 00230;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF03477;
pfam_desc ATP cone domain;
pfam_id ATP-cone;
pfam_target db:Pfam-A.hmm|PF03477.16 evalue:4.2e-18 score:64.9 best_domain_score:64.3 name:ATP-cone;
sprot_desc Transcriptional repressor NrdR;
sprot_id sp|C5CHN3|NRDR_KOSOT;
sprot_target db:uniprot_sprot|sp|C5CHN3|NRDR_KOSOT 1 154 evalue:3.0e-39 qcov:93.30 identity:51.30;
tigrfam_acc TIGR00244;
tigrfam_desc transcriptional regulator NrdR;
tigrfam_mainrole Regulatory functions;
tigrfam_name TIGR00244;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00244 evalue:2.6e-53 score:179.2 best_domain_score:178.9 name:TIGR00244;
69444 68638 CDS
ID metaerg.pl|04056
allgo_ids GO:0005515;
allko_ids K01090;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000016.1_42 34 267 evalue:3.3e-33 qcov:87.30 identity:34.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00515; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF13174; PF13176; PF13181; PF13525;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Outer membrane lipoprotein;
pfam_id TPR_1; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8; YfiO;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:6.3e-11 score:40.9 best_domain_score:19.5 name:TPR_1; db:Pfam-A.hmm|PF13424.6 evalue:1.2e-08 score:34.4 best_domain_score:18.7 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:8.2e-09 score:34.8 best_domain_score:18.8 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:3.2e-13 score:49.3 best_domain_score:41.4 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:3.1e-07 score:29.5 best_domain_score:14.0 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:7.7e-10 score:38.4 best_domain_score:27.0 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:1e-13 score:49.5 best_domain_score:21.2 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:1.1e-18 score:65.8 best_domain_score:31.3 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:1.4e-07 score:30.3 best_domain_score:14.1 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:2.6e-08 score:32.7 best_domain_score:19.2 name:TPR_8; db:Pfam-A.hmm|PF13525.6 evalue:1.8e-11 score:43.3 best_domain_score:29.8 name:YfiO;
sp YES;
68638 68754 lipoprotein_signal_peptide
ID metaerg.pl|04057
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
70084 69500 CDS
ID metaerg.pl|04058
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2982;s__UBA2982 sp002347035;
genomedb_acc GCA_002347035.1;
genomedb_target db:genomedb|GCA_002347035.1|DEAM01000031.1_56 5 191 evalue:2.0e-48 qcov:96.40 identity:57.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00691;
pfam_desc OmpA family;
pfam_id OmpA;
pfam_target db:Pfam-A.hmm|PF00691.20 evalue:2.1e-22 score:78.5 best_domain_score:77.9 name:OmpA;
sp YES;
tigrfam_acc TIGR02802;
tigrfam_desc peptidoglycan-associated lipoprotein;
tigrfam_name Pal_lipo;
tigrfam_target db:TIGRFAMs.hmm|TIGR02802 evalue:1.1e-37 score:127.4 best_domain_score:126.8 name:TIGR02802;
69500 69559 lipoprotein_signal_peptide
ID metaerg.pl|04059
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
71668 70271 CDS
ID metaerg.pl|04060
allgo_ids GO:0006508;
allko_ids K01730; K01303;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD48830.1 10 457 evalue:3.4e-150 qcov:96.30 identity:57.00;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00930; PF07676; PF04052;
pfam_desc Dipeptidyl peptidase IV (DPP IV) N-terminal region; WD40-like Beta Propeller Repeat; TolB amino-terminal domain;
pfam_id DPPIV_N; PD40; TolB_N;
pfam_target db:Pfam-A.hmm|PF00930.21 evalue:3.2e-06 score:25.4 best_domain_score:10.0 name:DPPIV_N; db:Pfam-A.hmm|PF07676.12 evalue:4.2e-28 score:95.9 best_domain_score:35.7 name:PD40; db:Pfam-A.hmm|PF04052.13 evalue:8.8e-14 score:50.8 best_domain_score:49.7 name:TolB_N;
sp YES;
tm_num 1;
70271 70372 signal_peptide
ID metaerg.pl|04061
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
71668 70271 transmembrane_helix
ID metaerg.pl|04062
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i70307-70375o;
72416 71661 CDS
ID metaerg.pl|04063
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000006.1_42 9 250 evalue:1.1e-25 qcov:96.40 identity:41.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF13103;
pfam_desc TonB C terminal;
pfam_id TonB_2;
pfam_target db:Pfam-A.hmm|PF13103.6 evalue:2.2e-08 score:33.5 best_domain_score:33.5 name:TonB_2;
tm_num 1;
72416 71661 transmembrane_helix
ID metaerg.pl|04064
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i71694-71762o;
72929 72486 CDS
ID metaerg.pl|04065
allgo_ids GO:0022857; GO:0055085; GO:0005887; GO:0005215; GO:0015031;
allko_ids K03559;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002313925;
genomedb_acc GCA_002313925.1;
genomedb_target db:genomedb|GCA_002313925.1|DCAZ01000024.1_5 6 123 evalue:5.3e-25 qcov:80.30 identity:55.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF02472;
pfam_desc Biopolymer transport protein ExbD/TolR;
pfam_id ExbD;
pfam_target db:Pfam-A.hmm|PF02472.16 evalue:2.8e-19 score:68.8 best_domain_score:68.5 name:ExbD;
sprot_desc Biopolymer transport protein exbD2;
sprot_id sp|Q9ZHV9|EXBD2_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9ZHV9|EXBD2_VIBCH 9 127 evalue:6.0e-07 qcov:81.00 identity:30.00;
tm_num 1;
72929 72486 transmembrane_helix
ID metaerg.pl|04066
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i72543-72611o;
73648 72926 CDS
ID metaerg.pl|04067
allgo_ids GO:0005887; GO:0043213; GO:0007049; GO:0051301; GO:0017038;
allko_ids K03562;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06694.1 5 240 evalue:2.8e-87 qcov:98.30 identity:72.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF01618;
pfam_desc MotA/TolQ/ExbB proton channel family;
pfam_id MotA_ExbB;
pfam_target db:Pfam-A.hmm|PF01618.16 evalue:1.5e-32 score:111.3 best_domain_score:110.6 name:MotA_ExbB;
sprot_desc Tol-Pal system protein TolQ;
sprot_id sp|P50598|TOLQ_PSEAE;
sprot_target db:uniprot_sprot|sp|P50598|TOLQ_PSEAE 16 237 evalue:7.7e-20 qcov:92.50 identity:32.20;
tm_num 3;
73648 72926 transmembrane_helix
ID metaerg.pl|04068
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology o73001-73069i73385-73453o73496-73564i;
74721 73645 CDS
ID metaerg.pl|04069
allec_ids 5.1.3.2;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0050662; GO:0003978; GO:0006012;
allko_ids K01711; K01784;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000193.1_5 25 344 evalue:1.0e-117 qcov:89.40 identity:66.60;
kegg_pathway_id 00051; 00520; 00052;
kegg_pathway_name Fructose and mannose metabolism; Nucleotide sugars metabolism; Galactose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id COLANSYN-PWY; PWY-3821; PWY-6397; PWY-5114; PWY-6404; PWY-6317;
metacyc_pathway_name colanic acid building blocks biosynthesis;; D-galactose detoxification;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; UDP-sugars interconversion;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; D-galactose degradation I (Leloir pathway);;
metacyc_pathway_type Carbohydrates-Biosynthesis; Super-Pathways;; Detoxification;; Cell-Wall-Biosynthesis;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; GALACTOSE-DEGRADATION;;
pfam_acc PF01073; PF01370; PF16363; PF07993; PF02719; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; Male sterility protein; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; NAD_binding_4; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:3.2e-19 score:68.2 best_domain_score:67.8 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:3.5e-56 score:189.6 best_domain_score:189.4 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:3.2e-52 score:177.2 best_domain_score:176.8 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF07993.12 evalue:5.8e-13 score:47.8 best_domain_score:35.1 name:NAD_binding_4; db:Pfam-A.hmm|PF02719.15 evalue:1.7e-11 score:43.0 best_domain_score:39.4 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:4.7e-13 score:48.1 best_domain_score:47.5 name:RmlD_sub_bind;
sprot_desc Putative UDP-glucose 4-epimerase;
sprot_id sp|Q57664|GALE_METJA;
sprot_target db:uniprot_sprot|sp|Q57664|GALE_METJA 31 340 evalue:7.1e-70 qcov:86.60 identity:42.80;
76106 74718 CDS
ID metaerg.pl|04070
allec_ids 1.2.1.70;
allgo_ids GO:0008883; GO:0033014; GO:0050661; GO:0055114; GO:0006782;
allko_ids K02492;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD48825.1 2 439 evalue:1.2e-115 qcov:94.80 identity:50.90;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-5188; PWY-5918;
metacyc_pathway_name tetrapyrrole biosynthesis I (from glutamate);; superpathay of heme b biosynthesis from glutamate;;
metacyc_pathway_type Tetrapyrrole-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF03807; PF00745; PF05201; PF02423; PF01488;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; Glutamyl-tRNAGlu reductase, dimerisation domain; Glutamyl-tRNAGlu reductase, N-terminal domain; Ornithine cyclodeaminase/mu-crystallin family; Shikimate / quinate 5-dehydrogenase;
pfam_id F420_oxidored; GlutR_dimer; GlutR_N; OCD_Mu_crystall; Shikimate_DH;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:0.00014 score:21.6 best_domain_score:20.5 name:F420_oxidored; db:Pfam-A.hmm|PF00745.20 evalue:2.5e-26 score:91.2 best_domain_score:89.7 name:GlutR_dimer; db:Pfam-A.hmm|PF05201.15 evalue:1.1e-41 score:141.3 best_domain_score:140.6 name:GlutR_N; db:Pfam-A.hmm|PF02423.15 evalue:6e-05 score:21.3 best_domain_score:20.7 name:OCD_Mu_crystall; db:Pfam-A.hmm|PF01488.20 evalue:8.4e-41 score:138.5 best_domain_score:137.9 name:Shikimate_DH;
sprot_desc Glutamyl-tRNA reductase;
sprot_id sp|A0LDT6|HEM1_MAGMM;
sprot_target db:uniprot_sprot|sp|A0LDT6|HEM1_MAGMM 1 425 evalue:1.6e-82 qcov:92.00 identity:40.80;
tigrfam_acc TIGR01035;
tigrfam_desc glutamyl-tRNA reductase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemA;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01035 evalue:1.1e-123 score:412.4 best_domain_score:412.2 name:TIGR01035;
76918 76109 CDS
ID metaerg.pl|04071
allgo_ids GO:0017004; GO:0020037;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA6934;s__UBA6934 sp002346625;
genomedb_acc GCA_002346625.1;
genomedb_target db:genomedb|GCA_002346625.1|DEAF01000001.1_17 1 267 evalue:4.6e-67 qcov:99.30 identity:52.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF01578;
pfam_desc Cytochrome C assembly protein;
pfam_id Cytochrom_C_asm;
pfam_target db:Pfam-A.hmm|PF01578.20 evalue:4.2e-25 score:88.0 best_domain_score:88.0 name:Cytochrom_C_asm;
tm_num 8;
76918 76109 transmembrane_helix
ID metaerg.pl|04072
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology o76118-76174i76193-76252o76280-76348i76367-76432o76490-76558i76631-76699o76742-76795i76829-76897o;
77909 76944 CDS
ID metaerg.pl|04073
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000103.1_5 62 320 evalue:1.6e-18 qcov:80.70 identity:29.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
sp YES;
76944 77018 signal_peptide
ID metaerg.pl|04074
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
79007 78009 CDS
ID metaerg.pl|04075
allec_ids 4.2.1.24;
allgo_ids GO:0004655; GO:0033014; GO:0046872; GO:0006782;
allko_ids K01698;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89048.1 16 328 evalue:8.1e-122 qcov:94.30 identity:71.90;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-5918; PWY-5920; PWY-5188; PWY-5189; PWY-5529;
metacyc_pathway_name superpathay of heme b biosynthesis from glutamate;; superpathway of b heme biosynthesis from glycine;; tetrapyrrole biosynthesis I (from glutamate);; tetrapyrrole biosynthesis II (from glycine);; superpathway of bacteriochlorophyll a biosynthesis;;
metacyc_pathway_type Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Tetrapyrrole-Biosynthesis;; Tetrapyrrole-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;;
pfam_acc PF00490;
pfam_desc Delta-aminolevulinic acid dehydratase;
pfam_id ALAD;
pfam_target db:Pfam-A.hmm|PF00490.21 evalue:2.6e-148 score:492.6 best_domain_score:492.4 name:ALAD;
sprot_desc Delta-aminolevulinic acid dehydratase;
sprot_id sp|P43087|HEM2_SYNE7;
sprot_target db:uniprot_sprot|sp|P43087|HEM2_SYNE7 15 325 evalue:6.7e-107 qcov:93.70 identity:61.60;
79482 79021 CDS
ID metaerg.pl|04076
allec_ids 2.3.1.128;
allgo_ids GO:0016747;
allko_ids K03828; K01207; K00619;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatimonas;s__Gemmatimonas phototrophica;
genomedb_acc GCF_000695095.2;
genomedb_target db:genomedb|GCF_000695095.2|WP_082821222.1 1 142 evalue:5.6e-25 qcov:92.80 identity:47.20;
kegg_pathway_id 00220; 01032; 00530;
kegg_pathway_name Urea cycle and metabolism of amino groups; Glycan structures - degradation; Aminosugars metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00583; PF13673; PF13302; PF13508; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_3; Acetyltransf_7; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1e-15 score:57.2 best_domain_score:56.9 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:7e-11 score:41.4 best_domain_score:41.1 name:Acetyltransf_10; db:Pfam-A.hmm|PF13302.7 evalue:1.9e-06 score:27.8 best_domain_score:27.3 name:Acetyltransf_3; db:Pfam-A.hmm|PF13508.7 evalue:5.4e-11 score:42.0 best_domain_score:41.6 name:Acetyltransf_7; db:Pfam-A.hmm|PF08445.10 evalue:8.6e-07 score:28.1 best_domain_score:27.7 name:FR47;
tigrfam_acc TIGR01575;
tigrfam_desc ribosomal-protein-alanine acetyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name rimI;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01575 evalue:1.4e-34 score:118.2 best_domain_score:118.0 name:TIGR01575;
80261 79479 CDS
ID metaerg.pl|04077
allgo_ids GO:0005737; GO:0002949;
allko_ids K14742;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000012.1_80 11 248 evalue:5.3e-52 qcov:91.50 identity:51.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00814;
pfam_desc Glycoprotease family;
pfam_id Peptidase_M22;
pfam_target db:Pfam-A.hmm|PF00814.25 evalue:5.6e-17 score:61.5 best_domain_score:58.0 name:Peptidase_M22;
sprot_desc tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;
sprot_id sp|O05516|TSAB_BACSU;
sprot_target db:uniprot_sprot|sp|O05516|TSAB_BACSU 14 203 evalue:1.9e-11 qcov:73.10 identity:27.60;
tigrfam_acc TIGR03725;
tigrfam_desc tRNA threonylcarbamoyl adenosine modification protein YeaZ;
tigrfam_mainrole Protein synthesis;
tigrfam_name T6A_YeaZ;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03725 evalue:3.6e-42 score:143.9 best_domain_score:143.7 name:TIGR03725;
80725 80261 CDS
ID metaerg.pl|04078
allgo_ids GO:0002949;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000016.1_29 1 151 evalue:1.2e-48 qcov:98.10 identity:61.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF02367;
pfam_desc Threonylcarbamoyl adenosine biosynthesis protein TsaE;
pfam_id TsaE;
pfam_target db:Pfam-A.hmm|PF02367.17 evalue:2.7e-28 score:97.7 best_domain_score:97.4 name:TsaE;
tigrfam_acc TIGR00150;
tigrfam_desc tRNA threonylcarbamoyl adenosine modification protein YjeE;
tigrfam_mainrole Protein synthesis;
tigrfam_name T6A_YjeE;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00150 evalue:1.5e-24 score:85.5 best_domain_score:85.4 name:TIGR00150;
82763 80730 CDS
ID metaerg.pl|04079
allec_ids 3.1.25.-;
allgo_ids GO:0003677; GO:0005524; GO:0016787; GO:0005737; GO:0009380; GO:0016887; GO:0009381; GO:0004386; GO:0006289; GO:0009432;
allko_ids K03702;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000016.1_28 1 664 evalue:4.4e-292 qcov:98.10 identity:74.80;
kegg_pathway_id 03420;
kegg_pathway_name Nucleotide excision repair;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00271; PF04851; PF02151; PF12344; PF17757;
pfam_desc Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; UvrB/uvrC motif; Ultra-violet resistance protein B; UvrB interaction domain;
pfam_id Helicase_C; ResIII; UVR; UvrB; UvrB_inter;
pfam_target db:Pfam-A.hmm|PF00271.31 evalue:5.3e-18 score:64.6 best_domain_score:63.6 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:2.9e-09 score:36.4 best_domain_score:31.6 name:ResIII; db:Pfam-A.hmm|PF02151.19 evalue:3.1e-07 score:29.2 best_domain_score:29.2 name:UVR; db:Pfam-A.hmm|PF12344.8 evalue:9e-23 score:79.1 best_domain_score:78.1 name:UvrB; db:Pfam-A.hmm|PF17757.1 evalue:2.2e-34 score:116.8 best_domain_score:114.7 name:UvrB_inter;
sprot_desc UvrABC system protein B;
sprot_id sp|C1A4H0|UVRB_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A4H0|UVRB_GEMAT 4 664 evalue:7.5e-262 qcov:97.60 identity:68.20;
tigrfam_acc TIGR00631;
tigrfam_desc excinuclease ABC subunit B;
tigrfam_mainrole DNA metabolism;
tigrfam_name uvrb;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00631 evalue:0 score:1041.0 best_domain_score:1040.8 name:TIGR00631;
84891 82771 CDS
ID metaerg.pl|04080
allec_ids 2.7.6.5;
allgo_ids GO:0015969; GO:0005524; GO:0005525; GO:0008728; GO:0016301; GO:0015970;
allko_ids K01139; K00951;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000086.1_3 1 700 evalue:1.0e-307 qcov:99.20 identity:74.30;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PPGPPMET-PWY;
metacyc_pathway_name ppGpp biosynthesis;;
metacyc_pathway_type Metabolic-Regulators;;
pfam_acc PF13291; PF01966; PF13328; PF04607; PF02824;
pfam_desc ACT domain; HD domain; HD domain; Region found in RelA / SpoT proteins; TGS domain;
pfam_id ACT_4; HD; HD_4; RelA_SpoT; TGS;
pfam_target db:Pfam-A.hmm|PF13291.6 evalue:1.6e-17 score:63.1 best_domain_score:61.9 name:ACT_4; db:Pfam-A.hmm|PF01966.22 evalue:6.2e-09 score:35.4 best_domain_score:34.1 name:HD; db:Pfam-A.hmm|PF13328.6 evalue:1.9e-50 score:169.9 best_domain_score:168.9 name:HD_4; db:Pfam-A.hmm|PF04607.17 evalue:1.1e-36 score:124.9 best_domain_score:122.9 name:RelA_SpoT; db:Pfam-A.hmm|PF02824.21 evalue:4.5e-21 score:73.9 best_domain_score:72.4 name:TGS;
sprot_desc GTP pyrophosphokinase;
sprot_id sp|O52177|RELA_MYXXA;
sprot_target db:uniprot_sprot|sp|O52177|RELA_MYXXA 1 691 evalue:2.7e-182 qcov:97.90 identity:46.00;
tigrfam_acc TIGR00691;
tigrfam_desc RelA/SpoT family protein;
tigrfam_mainrole Cellular processes;
tigrfam_name spoT_relA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00691 evalue:4.2e-234 score:778.0 best_domain_score:777.8 name:TIGR00691;
85696 85109 CDS
ID metaerg.pl|04081
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Longibacter;s__Longibacter salinarum;
genomedb_acc GCF_002554795.1;
genomedb_target db:genomedb|GCF_002554795.1|WP_098074011.1 12 189 evalue:1.2e-40 qcov:91.30 identity:46.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
sp YES;
tm_num 1;
85109 85168 lipoprotein_signal_peptide
ID metaerg.pl|04082
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
85696 85109 transmembrane_helix
ID metaerg.pl|04083
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i85127-85195o;
86543 85839 CDS
ID metaerg.pl|04084
allgo_ids GO:0046872; GO:0008237;
allko_ids K03630;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000012.1_76 8 227 evalue:1.8e-67 qcov:94.00 identity:63.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF04002;
pfam_desc RadC-like JAB domain;
pfam_id RadC;
pfam_target db:Pfam-A.hmm|PF04002.15 evalue:2.1e-41 score:140.0 best_domain_score:139.4 name:RadC;
sprot_desc hypothetical protein;
sprot_id sp|Q67SI7|Y371_SYMTH;
sprot_target db:uniprot_sprot|sp|Q67SI7|Y371_SYMTH 1 223 evalue:8.8e-45 qcov:95.30 identity:46.30;
tigrfam_acc TIGR00608;
tigrfam_desc DNA repair protein RadC;
tigrfam_mainrole DNA metabolism;
tigrfam_name radc;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00608 evalue:3.2e-56 score:189.6 best_domain_score:189.4 name:TIGR00608;
88675 86630 CDS
ID metaerg.pl|04085
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatimonas;s__Gemmatimonas aurantiaca;
genomedb_acc GCF_000010305.1;
genomedb_target db:genomedb|GCF_000010305.1|WP_015894751.1 6 677 evalue:5.8e-74 qcov:98.70 identity:30.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
sp YES;
86630 86716 signal_peptide
ID metaerg.pl|04086
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
91977 88675 CDS
ID metaerg.pl|04087
allgo_ids GO:0005524; GO:0016020; GO:0017038; GO:0005737; GO:0005886; GO:0046872; GO:0065002; GO:0006605;
allko_ids K03070;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000322.1_4 2 1097 evalue:0.0e+00 qcov:99.60 identity:67.70;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF02810; PF07517; PF01043; PF07516;
pfam_desc SEC-C motif; SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain;
pfam_id SEC-C; SecA_DEAD; SecA_PP_bind; SecA_SW;
pfam_target db:Pfam-A.hmm|PF02810.15 evalue:1e-10 score:40.5 best_domain_score:39.8 name:SEC-C; db:Pfam-A.hmm|PF07517.14 evalue:7.5e-120 score:398.8 best_domain_score:398.4 name:SecA_DEAD; db:Pfam-A.hmm|PF01043.20 evalue:2.2e-29 score:101.6 best_domain_score:100.2 name:SecA_PP_bind; db:Pfam-A.hmm|PF07516.13 evalue:8e-58 score:195.0 best_domain_score:195.0 name:SecA_SW;
sprot_desc hypothetical protein;
sprot_id sp|Q8KD18|SECA_CHLTE;
sprot_target db:uniprot_sprot|sp|Q8KD18|SECA_CHLTE 1 1098 evalue:1.2e-261 qcov:99.80 identity:46.70;
tigrfam_acc TIGR00963;
tigrfam_desc preprotein translocase, SecA subunit;
tigrfam_mainrole Protein fate;
tigrfam_name secA;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00963 evalue:1.2e-293 score:975.4 best_domain_score:968.5 name:TIGR00963;
92602 91982 CDS
ID metaerg.pl|04088
allec_ids 2.7.7.18;
allgo_ids GO:0003824; GO:0009058; GO:0005524; GO:0004515; GO:0009435;
allko_ids K00969;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000086.1_14 8 206 evalue:8.8e-42 qcov:96.60 identity:46.00;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-5381; PYRIDNUCSYN-PWY; PWY-3502; NADSYN-PWY; PWY0-781; PWY-5653;
metacyc_pathway_name pyridine nucleotide cycling (plants);; NAD de novo biosynthesis I (from aspartate);; superpathway of NAD biosynthesis in eukaryotes;; NAD de novo biosynthesis II (from tryptophan);; aspartate superpathway;; NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde;;
metacyc_pathway_type NAD-Metabolism;; NAD-SYN;; NAD-SYN; Super-Pathways;; NAD-SYN; Super-Pathways;; Super-Pathways;; NAD-SYN;;
pfam_acc PF01467;
pfam_desc Cytidylyltransferase-like;
pfam_id CTP_transf_like;
pfam_target db:Pfam-A.hmm|PF01467.26 evalue:2.6e-24 score:85.3 best_domain_score:85.0 name:CTP_transf_like;
sprot_desc Probable nicotinate-nucleotide adenylyltransferase;
sprot_id sp|C5D4W0|NADD_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D4W0|NADD_GEOSW 12 205 evalue:4.9e-39 qcov:94.20 identity:43.80;
tigrfam_acc TIGR00125; TIGR00482;
tigrfam_desc cytidyltransferase-like domain; nicotinate (nicotinamide) nucleotide adenylyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cyt_tran_rel; TIGR00482;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00125 evalue:7.7e-12 score:44.4 best_domain_score:43.5 name:TIGR00125; db:TIGRFAMs.hmm|TIGR00482 evalue:1.9e-48 score:164.2 best_domain_score:163.9 name:TIGR00482;
93429 92599 CDS
ID metaerg.pl|04089
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000033.1_19 38 276 evalue:2.6e-41 qcov:86.60 identity:37.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF13428; PF07719; PF13174; PF13525;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Outer membrane lipoprotein;
pfam_id TPR_14; TPR_2; TPR_6; YfiO;
pfam_target db:Pfam-A.hmm|PF13428.6 evalue:1.5e-06 score:27.8 best_domain_score:13.6 name:TPR_14; db:Pfam-A.hmm|PF07719.17 evalue:8e-09 score:34.2 best_domain_score:10.7 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:1.1e-09 score:37.6 best_domain_score:14.1 name:TPR_6; db:Pfam-A.hmm|PF13525.6 evalue:4e-18 score:65.1 best_domain_score:64.8 name:YfiO;
sp YES;
tigrfam_acc TIGR03302;
tigrfam_desc outer membrane assembly lipoprotein YfiO;
tigrfam_mainrole Protein fate;
tigrfam_name OM_YfiO;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR03302 evalue:9e-40 score:135.8 best_domain_score:135.5 name:TIGR03302;
tm_num 1;
92599 92748 lipoprotein_signal_peptide
ID metaerg.pl|04090
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
93429 92599 transmembrane_helix
ID metaerg.pl|04091
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i92707-92775o;
94753 93620 CDS
ID metaerg.pl|04092
allgo_ids GO:0005886; GO:0003824; GO:0003677; GO:0000160;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000086.1_5 1 375 evalue:5.0e-136 qcov:99.50 identity:67.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF01041;
pfam_desc DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF01041.17 evalue:3.8e-108 score:361.3 best_domain_score:361.1 name:DegT_DnrJ_EryC1;
sprot_desc Pleiotropic regulatory protein;
sprot_id sp|P15263|DEGT_GEOSE;
sprot_target db:uniprot_sprot|sp|P15263|DEGT_GEOSE 1 376 evalue:4.8e-101 qcov:99.70 identity:50.00;
95848 94808 CDS
ID metaerg.pl|04093
allgo_ids GO:0005515;
allko_ids K01768; K09571; K08884; K09667; K01802; K09574;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000103.1_12 33 341 evalue:7.1e-68 qcov:89.30 identity:47.80;
kegg_pathway_id 01030; 00230;
kegg_pathway_name Glycan structures - biosynthesis 1; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00515; PF13414; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF13174; PF13176; PF13181;
pfam_desc Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:2.4e-18 score:64.3 best_domain_score:19.9 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:5.1e-12 score:44.5 best_domain_score:23.1 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:2e-14 score:52.8 best_domain_score:22.0 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:3.3e-14 score:51.6 best_domain_score:21.9 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:9.8e-14 score:51.0 best_domain_score:28.8 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:1.2e-05 score:24.6 best_domain_score:8.3 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:1.8e-12 score:46.8 best_domain_score:26.4 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:3.9e-22 score:75.8 best_domain_score:24.6 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:2e-11 score:43.0 best_domain_score:12.2 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:2.1e-14 score:51.7 best_domain_score:17.3 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:1.6e-13 score:49.0 best_domain_score:14.5 name:TPR_8;
tm_num 1;
95848 94808 transmembrane_helix
ID metaerg.pl|04094
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i94925-94993o;
96788 95823 CDS
ID metaerg.pl|04095
allec_ids 4.1.1.35;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0005737; GO:0070062; GO:0032580; GO:0016021; GO:0070403; GO:0042803; GO:0048040; GO:0051262; GO:0033320;
allko_ids K01711; K01784; K08678;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000039.1_3 1 320 evalue:2.1e-138 qcov:99.70 identity:74.40;
kegg_pathway_id 00051; 00520; 00500; 00052;
kegg_pathway_name Fructose and mannose metabolism; Nucleotide sugars metabolism; Starch and sucrose metabolism; Galactose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id PWY-4821; PWY-5114;
metacyc_pathway_name UDP-α-D-xylose biosynthesis;; UDP-sugars interconversion;;
metacyc_pathway_type Super-Pathways; UDP-Sugar-Biosynthesis;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;;
pfam_acc PF01073; PF01370; PF16363; PF07993; PF02719; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; Male sterility protein; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; NAD_binding_4; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:9.6e-08 score:30.6 best_domain_score:29.6 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:3e-43 score:147.2 best_domain_score:146.9 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:1.6e-45 score:155.2 best_domain_score:152.0 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF07993.12 evalue:2.3e-06 score:26.2 best_domain_score:15.5 name:NAD_binding_4; db:Pfam-A.hmm|PF02719.15 evalue:6.1e-07 score:28.1 best_domain_score:21.6 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:3.2e-05 score:22.4 best_domain_score:21.5 name:RmlD_sub_bind;
sprot_desc UDP-glucuronic acid decarboxylase 1;
sprot_id sp|Q8NBZ7|UXS1_HUMAN;
sprot_target db:uniprot_sprot|sp|Q8NBZ7|UXS1_HUMAN 2 311 evalue:1.0e-91 qcov:96.60 identity:53.90;
98147 96798 CDS
ID metaerg.pl|04096
allec_ids 1.1.1.22;
allgo_ids GO:0016616; GO:0051287; GO:0055114; GO:0003979; GO:0009103; GO:0006065;
allko_ids K02472; K00012; K02474; K00066; K13015;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000086.1_6 1 440 evalue:8.9e-172 qcov:98.00 identity:68.00;
kegg_pathway_id 02020; 00520; 00051; 00040; 00530; 00500;
kegg_pathway_name Two-component system - General; Nucleotide sugars metabolism; Fructose and mannose metabolism; Pentose and glucuronate interconversions; Aminosugars metabolism; Starch and sucrose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id COLANSYN-PWY; PWY-3821; PWY-6415; PWY-4821; PWY-5114;
metacyc_pathway_name colanic acid building blocks biosynthesis;; D-galactose detoxification;; L-ascorbate biosynthesis V;; UDP-α-D-xylose biosynthesis;; UDP-sugars interconversion;;
metacyc_pathway_type Carbohydrates-Biosynthesis; Super-Pathways;; Detoxification;; Ascorbate-Biosynthesis; Super-Pathways;; Super-Pathways; UDP-Sugar-Biosynthesis;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;;
pfam_acc PF00984; PF03720; PF03721;
pfam_desc UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain;
pfam_id UDPG_MGDP_dh; UDPG_MGDP_dh_C; UDPG_MGDP_dh_N;
pfam_target db:Pfam-A.hmm|PF00984.19 evalue:6.2e-37 score:124.9 best_domain_score:123.9 name:UDPG_MGDP_dh; db:Pfam-A.hmm|PF03720.15 evalue:2.4e-27 score:94.6 best_domain_score:89.6 name:UDPG_MGDP_dh_C; db:Pfam-A.hmm|PF03721.14 evalue:1.4e-63 score:213.1 best_domain_score:212.7 name:UDPG_MGDP_dh_N;
sp YES;
sprot_desc UDP-glucose 6-dehydrogenase;
sprot_id sp|O86422|UDG_PSEAE;
sprot_target db:uniprot_sprot|sp|O86422|UDG_PSEAE 1 433 evalue:6.3e-124 qcov:96.40 identity:51.90;
tigrfam_acc TIGR03026;
tigrfam_desc nucleotide sugar dehydrogenase;
tigrfam_name NDP-sugDHase;
tigrfam_target db:TIGRFAMs.hmm|TIGR03026 evalue:4.4e-130 score:433.3 best_domain_score:433.1 name:TIGR03026;
96798 96857 signal_peptide
ID metaerg.pl|04097
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
99535 98144 CDS
ID metaerg.pl|04098
allec_ids 1.1.1.136;
allgo_ids GO:0050661; GO:0016021; GO:0051287; GO:0003954; GO:0016628; GO:0047004; GO:0071555; GO:0009243; GO:0000271;
allko_ids K00012; K02472; K00066; K03388; K02474; K13015;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000271.1_3 13 450 evalue:1.0e-170 qcov:94.60 identity:68.00;
kegg_pathway_id 00530; 00040; 00500; 00790; 00520; 02020; 00051;
kegg_pathway_name Aminosugars metabolism; Pentose and glucuronate interconversions; Starch and sucrose metabolism; Folate biosynthesis; Nucleotide sugars metabolism; Two-component system - General; Fructose and mannose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF03446; PF00984; PF03720; PF03721;
pfam_desc NAD binding domain of 6-phosphogluconate dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain;
pfam_id NAD_binding_2; UDPG_MGDP_dh; UDPG_MGDP_dh_C; UDPG_MGDP_dh_N;
pfam_target db:Pfam-A.hmm|PF03446.15 evalue:8.3e-07 score:28.5 best_domain_score:26.7 name:NAD_binding_2; db:Pfam-A.hmm|PF00984.19 evalue:2.7e-30 score:103.7 best_domain_score:102.5 name:UDPG_MGDP_dh; db:Pfam-A.hmm|PF03720.15 evalue:2.3e-23 score:81.9 best_domain_score:80.5 name:UDPG_MGDP_dh_C; db:Pfam-A.hmm|PF03721.14 evalue:1.1e-38 score:132.0 best_domain_score:131.3 name:UDPG_MGDP_dh_N;
sprot_desc UDP-N-acetyl-D-glucosamine 6-dehydrogenase;
sprot_id sp|G3XD94|UGND_PSEAE;
sprot_target db:uniprot_sprot|sp|G3XD94|UGND_PSEAE 17 429 evalue:4.2e-115 qcov:89.20 identity:49.00;
tigrfam_acc TIGR03026;
tigrfam_desc nucleotide sugar dehydrogenase;
tigrfam_name NDP-sugDHase;
tigrfam_target db:TIGRFAMs.hmm|TIGR03026 evalue:1.4e-128 score:428.4 best_domain_score:428.2 name:TIGR03026;
100540 99647 CDS
ID metaerg.pl|04099
allgo_ids GO:0004852; GO:0033014;
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__UBA6807;g__UBA6807;s__UBA6807 sp002441265;
genomedb_acc GCA_002441265.1;
genomedb_target db:genomedb|GCA_002441265.1|DJVQ01000001.1_2 35 295 evalue:4.0e-27 qcov:87.90 identity:35.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF02602;
pfam_desc Uroporphyrinogen-III synthase HemD;
pfam_id HEM4;
pfam_target db:Pfam-A.hmm|PF02602.15 evalue:3.1e-39 score:133.9 best_domain_score:133.7 name:HEM4;
100809 100591 CDS
ID metaerg.pl|04100
allgo_ids GO:0003735; GO:0005840; GO:0006412;
allko_ids K02902;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002724575;
genomedb_acc GCA_002724575.1;
genomedb_target db:genomedb|GCA_002724575.1|MBO76170.1 1 66 evalue:2.2e-24 qcov:91.70 identity:78.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00830;
pfam_desc Ribosomal L28 family;
pfam_id Ribosomal_L28;
pfam_target db:Pfam-A.hmm|PF00830.19 evalue:7.2e-25 score:86.2 best_domain_score:86.0 name:Ribosomal_L28;
sprot_desc 50S ribosomal protein L28;
sprot_id sp|Q2LTU0|RL28_SYNAS;
sprot_target db:uniprot_sprot|sp|Q2LTU0|RL28_SYNAS 1 63 evalue:9.1e-17 qcov:87.50 identity:60.90;
tigrfam_acc TIGR00009;
tigrfam_desc ribosomal protein bL28;
tigrfam_mainrole Protein synthesis;
tigrfam_name L28;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00009 evalue:1e-23 score:82.7 best_domain_score:82.5 name:TIGR00009;
101407 100847 CDS
ID metaerg.pl|04101
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
tm_num 1;
101407 100847 transmembrane_helix
ID metaerg.pl|04102
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i100871-100939o;
101725 101429 CDS
ID metaerg.pl|04103
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02879;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000033.1_25 4 93 evalue:5.3e-37 qcov:91.80 identity:88.90;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF01196;
pfam_desc Ribosomal protein L17;
pfam_id Ribosomal_L17;
pfam_target db:Pfam-A.hmm|PF01196.19 evalue:3.1e-37 score:126.6 best_domain_score:126.5 name:Ribosomal_L17;
sprot_desc 50S ribosomal protein L17;
sprot_id sp|Q47LM2|RL17_THEFY;
sprot_target db:uniprot_sprot|sp|Q47LM2|RL17_THEFY 1 97 evalue:4.9e-29 qcov:99.00 identity:62.90;
tigrfam_acc TIGR00059;
tigrfam_desc ribosomal protein bL17;
tigrfam_mainrole Protein synthesis;
tigrfam_name L17;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00059 evalue:7.4e-39 score:131.7 best_domain_score:131.6 name:TIGR00059;
102893 101850 CDS
ID metaerg.pl|04104
allec_ids 2.7.7.6;
allgo_ids GO:0003899; GO:0006351; GO:0046983; GO:0003677;
allko_ids K03040;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000271.1_8 1 347 evalue:5.3e-132 qcov:100.00 identity:70.60;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF01000; PF03118; PF01193;
pfam_desc RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; RNA polymerase Rpb3/Rpb11 dimerisation domain;
pfam_id RNA_pol_A_bac; RNA_pol_A_CTD; RNA_pol_L;
pfam_target db:Pfam-A.hmm|PF01000.26 evalue:2.2e-18 score:65.9 best_domain_score:64.8 name:RNA_pol_A_bac; db:Pfam-A.hmm|PF03118.15 evalue:5.8e-21 score:73.3 best_domain_score:72.2 name:RNA_pol_A_CTD; db:Pfam-A.hmm|PF01193.24 evalue:7.3e-19 score:66.2 best_domain_score:65.6 name:RNA_pol_L;
sprot_desc DNA-directed RNA polymerase subunit alpha;
sprot_id sp|A7HBP5|RPOA_ANADF;
sprot_target db:uniprot_sprot|sp|A7HBP5|RPOA_ANADF 8 325 evalue:6.0e-66 qcov:91.60 identity:45.80;
tigrfam_acc TIGR02027;
tigrfam_desc DNA-directed RNA polymerase, alpha subunit;
tigrfam_mainrole Transcription;
tigrfam_name rpoA;
tigrfam_sub1role DNA-dependent RNA polymerase;
tigrfam_target db:TIGRFAMs.hmm|TIGR02027 evalue:7.8e-95 score:316.6 best_domain_score:316.4 name:TIGR02027;
103624 102989 CDS
ID metaerg.pl|04105
allgo_ids GO:0005622; GO:0019843; GO:0015935; GO:0046872; GO:0003735; GO:0006412;
allko_ids K02986;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000012.1_65 1 211 evalue:7.5e-89 qcov:100.00 identity:76.30;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00163; PF01479;
pfam_desc Ribosomal protein S4/S9 N-terminal domain; S4 domain;
pfam_id Ribosomal_S4; S4;
pfam_target db:Pfam-A.hmm|PF00163.19 evalue:5.1e-33 score:113.1 best_domain_score:112.1 name:Ribosomal_S4; db:Pfam-A.hmm|PF01479.25 evalue:5.5e-23 score:79.7 best_domain_score:78.8 name:S4;
sprot_desc 30S ribosomal protein S4;
sprot_id sp|P62664|RS4_THET2;
sprot_target db:uniprot_sprot|sp|P62664|RS4_THET2 1 211 evalue:1.5e-64 qcov:100.00 identity:56.40;
tigrfam_acc TIGR01017;
tigrfam_desc ribosomal protein uS4;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpsD_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01017 evalue:1.3e-72 score:242.9 best_domain_score:242.7 name:TIGR01017;
104089 103742 CDS
ID metaerg.pl|04106
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02948;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002348265;
genomedb_acc GCA_002348265.1;
genomedb_target db:genomedb|GCA_002348265.1|DEAT01000011.1_26 1 115 evalue:1.1e-46 qcov:100.00 identity:83.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00411;
pfam_desc Ribosomal protein S11;
pfam_id Ribosomal_S11;
pfam_target db:Pfam-A.hmm|PF00411.19 evalue:3.2e-45 score:152.3 best_domain_score:152.1 name:Ribosomal_S11;
sprot_desc 30S ribosomal protein S11;
sprot_id sp|Q2S3P1|RS11_SALRD;
sprot_target db:uniprot_sprot|sp|Q2S3P1|RS11_SALRD 1 115 evalue:4.6e-39 qcov:100.00 identity:65.20;
tigrfam_acc TIGR03632;
tigrfam_desc ribosomal protein uS11;
tigrfam_mainrole Protein synthesis;
tigrfam_name uS11_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03632 evalue:4.3e-51 score:171.4 best_domain_score:171.3 name:TIGR03632;
104536 104156 CDS
ID metaerg.pl|04107
allgo_ids GO:0003723; GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843; GO:0000049;
allko_ids K02952;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000012.1_63 1 126 evalue:2.0e-49 qcov:100.00 identity:81.70;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00416;
pfam_desc Ribosomal protein S13/S18;
pfam_id Ribosomal_S13;
pfam_target db:Pfam-A.hmm|PF00416.22 evalue:2.3e-35 score:121.0 best_domain_score:115.9 name:Ribosomal_S13;
sprot_desc 30S ribosomal protein S13;
sprot_id sp|C1A4J3|RS13_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A4J3|RS13_GEMAT 1 122 evalue:2.2e-42 qcov:96.80 identity:71.30;
tigrfam_acc TIGR03631;
tigrfam_desc ribosomal protein uS13;
tigrfam_mainrole Protein synthesis;
tigrfam_name uS13_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03631 evalue:6.1e-53 score:177.2 best_domain_score:177.1 name:TIGR03631;
105547 104759 CDS
ID metaerg.pl|04108
allec_ids 3.4.11.18;
allgo_ids GO:0046872; GO:0070006; GO:0070084;
allko_ids K01265;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000011.1_75 1 248 evalue:2.0e-91 qcov:94.70 identity:66.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00557;
pfam_desc Metallopeptidase family M24;
pfam_id Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF00557.24 evalue:4.7e-50 score:169.4 best_domain_score:169.2 name:Peptidase_M24;
sprot_desc Methionine aminopeptidase;
sprot_id sp|P50614|MAP1_CLOPE;
sprot_target db:uniprot_sprot|sp|P50614|MAP1_CLOPE 1 248 evalue:3.3e-72 qcov:94.70 identity:52.40;
tigrfam_acc TIGR00500;
tigrfam_desc methionine aminopeptidase, type I;
tigrfam_mainrole Protein fate;
tigrfam_name met_pdase_I;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00500 evalue:1.3e-88 score:295.9 best_domain_score:295.7 name:TIGR00500;
106221 105544 CDS
ID metaerg.pl|04109
allec_ids 2.7.4.3; 2.7.4.-;
allgo_ids GO:0004017; GO:0005737; GO:0005524; GO:0008270; GO:0044209;
allko_ids K00939; K01939;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000011.1_76 1 215 evalue:5.2e-64 qcov:95.60 identity:55.80;
kegg_pathway_id 00230; 00252;
kegg_pathway_name Purine metabolism; Alanine and aspartate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6577; PWY-5107; PRPP-PWY; P1-PWY; PWY-6126;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; farnesylcysteine salvage pathway;; phytol salvage pathway;; superpathway of histidine, purine, and pyrimidine biosynthesis;; ; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; DITERPENOID-SYN;; Super-Pathways;; ; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF13207; PF00406; PF05191;
pfam_desc AAA domain; Adenylate kinase; Adenylate kinase, active site lid;
pfam_id AAA_17; ADK; ADK_lid;
pfam_target db:Pfam-A.hmm|PF13207.6 evalue:2.2e-21 score:75.9 best_domain_score:75.1 name:AAA_17; db:Pfam-A.hmm|PF00406.22 evalue:4.3e-52 score:175.5 best_domain_score:175.2 name:ADK; db:Pfam-A.hmm|PF05191.14 evalue:2e-12 score:46.1 best_domain_score:45.5 name:ADK_lid;
sprot_desc Adenylate kinase;
sprot_id sp|Q3A6M6|KAD_PELCD;
sprot_target db:uniprot_sprot|sp|Q3A6M6|KAD_PELCD 1 213 evalue:2.8e-56 qcov:94.70 identity:51.20;
tigrfam_acc TIGR01351;
tigrfam_desc adenylate kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name adk;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01351 evalue:1.2e-71 score:239.9 best_domain_score:239.7 name:TIGR01351;
107534 106221 CDS
ID metaerg.pl|04110
allgo_ids GO:0015031; GO:0016020; GO:0031522; GO:0005887; GO:0005886; GO:0008320; GO:0005048; GO:0043952; GO:0006616;
allko_ids K03076;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000012.1_59 1 437 evalue:7.0e-198 qcov:100.00 identity:80.10;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00344;
pfam_desc SecY translocase;
pfam_id SecY;
pfam_target db:Pfam-A.hmm|PF00344.20 evalue:3.8e-106 score:354.0 best_domain_score:353.8 name:SecY;
sprot_desc hypothetical protein;
sprot_id sp|O66491|SECY_AQUAE;
sprot_target db:uniprot_sprot|sp|O66491|SECY_AQUAE 1 425 evalue:4.6e-95 qcov:97.30 identity:44.50;
tigrfam_acc TIGR00967;
tigrfam_desc preprotein translocase, SecY subunit;
tigrfam_mainrole Protein fate;
tigrfam_name 3a0501s007;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00967 evalue:3.7e-115 score:384.2 best_domain_score:384.1 name:TIGR00967;
tm_num 10;
107534 106221 transmembrane_helix
ID metaerg.pl|04111
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
topology i106275-106343o106428-106496i106557-106625o106653-106721i106740-106808o106851-106919i107028-107096o107139-107207i107295-107363o107376-107432i;
108017 107574 CDS
ID metaerg.pl|04112
allgo_ids GO:0015934; GO:0019843; GO:0003735; GO:0006412;
allko_ids K02876;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000049.1_14 1 146 evalue:1.3e-42 qcov:99.30 identity:65.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00828;
pfam_desc Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A;
pfam_id Ribosomal_L27A;
pfam_target db:Pfam-A.hmm|PF00828.19 evalue:2.6e-37 score:127.6 best_domain_score:127.3 name:Ribosomal_L27A;
sprot_desc 50S ribosomal protein L15;
sprot_id sp|B7GJ86|RL15_ANOFW;
sprot_target db:uniprot_sprot|sp|B7GJ86|RL15_ANOFW 3 146 evalue:2.4e-40 qcov:98.00 identity:58.60;
tigrfam_acc TIGR01071;
tigrfam_desc ribosomal protein uL15;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplO_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01071 evalue:3.7e-51 score:171.9 best_domain_score:171.7 name:TIGR01071;
108219 108025 CDS
ID metaerg.pl|04113
allgo_ids GO:0015934; GO:0003735; GO:0006412;
allko_ids K02907;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__GCA-2718595;s__GCA-2718595 sp002718595;
genomedb_acc GCA_002718595.1;
genomedb_target db:genomedb|GCA_002718595.1|MBI70367.1 5 62 evalue:8.0e-10 qcov:90.60 identity:60.30;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00327;
pfam_desc Ribosomal protein L30p/L7e;
pfam_id Ribosomal_L30;
pfam_target db:Pfam-A.hmm|PF00327.20 evalue:3.2e-16 score:58.2 best_domain_score:58.0 name:Ribosomal_L30;
sprot_desc 50S ribosomal protein L30;
sprot_id sp|Q65P89|RL30_BACLD;
sprot_target db:uniprot_sprot|sp|Q65P89|RL30_BACLD 6 60 evalue:1.2e-07 qcov:85.90 identity:52.70;
tigrfam_acc TIGR01308;
tigrfam_desc ribosomal protein uL30;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpmD_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01308 evalue:5e-21 score:73.3 best_domain_score:73.1 name:TIGR01308;
108736 108212 CDS
ID metaerg.pl|04114
allgo_ids GO:0003723; GO:0003735; GO:0005840; GO:0006412; GO:0015935; GO:0019843;
allko_ids K02988;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2982;s__UBA2982 sp002347035;
genomedb_acc GCA_002347035.1;
genomedb_target db:genomedb|GCA_002347035.1|DEAM01000024.1_30 1 170 evalue:1.0e-67 qcov:97.70 identity:78.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00333; PF03719;
pfam_desc Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain;
pfam_id Ribosomal_S5; Ribosomal_S5_C;
pfam_target db:Pfam-A.hmm|PF00333.20 evalue:6.8e-27 score:92.5 best_domain_score:91.9 name:Ribosomal_S5; db:Pfam-A.hmm|PF03719.15 evalue:2e-31 score:106.5 best_domain_score:106.1 name:Ribosomal_S5_C;
sprot_desc 30S ribosomal protein S5;
sprot_id sp|Q5WLP5|RS5_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WLP5|RS5_BACSK 17 168 evalue:2.3e-50 qcov:87.40 identity:67.10;
tigrfam_acc TIGR01021;
tigrfam_desc ribosomal protein uS5;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpsE_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01021 evalue:9.9e-66 score:219.5 best_domain_score:219.3 name:TIGR01021;
109128 108736 CDS
ID metaerg.pl|04115
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02881;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC07501.1 1 130 evalue:5.4e-45 qcov:100.00 identity:71.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00861;
pfam_desc Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast;
pfam_id Ribosomal_L18p;
pfam_target db:Pfam-A.hmm|PF00861.22 evalue:9.9e-41 score:138.0 best_domain_score:137.8 name:Ribosomal_L18p;
sprot_desc 50S ribosomal protein L18;
sprot_id sp|Q3A9T2|RL18_CARHZ;
sprot_target db:uniprot_sprot|sp|Q3A9T2|RL18_CARHZ 10 130 evalue:2.0e-30 qcov:93.10 identity:57.90;
tigrfam_acc TIGR00060;
tigrfam_desc ribosomal protein uL18;
tigrfam_mainrole Protein synthesis;
tigrfam_name L18_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00060 evalue:2e-34 score:117.6 best_domain_score:117.3 name:TIGR00060;
109672 109151 CDS
ID metaerg.pl|04116
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02933;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000067.1_20 1 173 evalue:1.4e-61 qcov:100.00 identity:69.40;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00347;
pfam_desc Ribosomal protein L6;
pfam_id Ribosomal_L6;
pfam_target db:Pfam-A.hmm|PF00347.23 evalue:2.2e-39 score:133.2 best_domain_score:71.4 name:Ribosomal_L6;
sprot_desc 50S ribosomal protein L6;
sprot_id sp|Q8ETW8|RL6_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8ETW8|RL6_OCEIH 2 171 evalue:1.2e-54 qcov:98.30 identity:58.20;
tigrfam_acc TIGR03654;
tigrfam_desc ribosomal protein uL6;
tigrfam_mainrole Protein synthesis;
tigrfam_name L6_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03654 evalue:1.4e-71 score:239.0 best_domain_score:238.9 name:TIGR03654;
110119 109727 CDS
ID metaerg.pl|04117
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02994;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000011.1_81 1 130 evalue:8.0e-57 qcov:100.00 identity:80.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00410;
pfam_desc Ribosomal protein S8;
pfam_id Ribosomal_S8;
pfam_target db:Pfam-A.hmm|PF00410.19 evalue:9.6e-46 score:154.1 best_domain_score:154.0 name:Ribosomal_S8;
sprot_desc 30S ribosomal protein S8;
sprot_id sp|A5GAV6|RS8_GEOUR;
sprot_target db:uniprot_sprot|sp|A5GAV6|RS8_GEOUR 2 130 evalue:2.2e-37 qcov:99.20 identity:56.90;
110321 110136 CDS
ID metaerg.pl|04118
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843; GO:0008270;
allko_ids K02954;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__HRBIN33;s__HRBIN33 sp002923375;
genomedb_acc GCA_002923375.1;
genomedb_target db:genomedb|GCA_002923375.1|GBD31310.1 1 61 evalue:4.6e-23 qcov:100.00 identity:85.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00253;
pfam_desc Ribosomal protein S14p/S29e;
pfam_id Ribosomal_S14;
pfam_target db:Pfam-A.hmm|PF00253.21 evalue:1.2e-23 score:81.9 best_domain_score:81.6 name:Ribosomal_S14;
sprot_desc 30S ribosomal protein S14 type Z;
sprot_id sp|Q1AU42|RS14Z_RUBXD;
sprot_target db:uniprot_sprot|sp|Q1AU42|RS14Z_RUBXD 1 61 evalue:9.7e-20 qcov:100.00 identity:70.50;
110936 110358 CDS
ID metaerg.pl|04119
allgo_ids GO:0005840; GO:0019843; GO:0003735; GO:0000049; GO:0006412;
allko_ids K02931;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000011.1_82 1 191 evalue:4.5e-72 qcov:99.50 identity:71.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF00281; PF00673;
pfam_desc Ribosomal protein L5; ribosomal L5P family C-terminus;
pfam_id Ribosomal_L5; Ribosomal_L5_C;
pfam_target db:Pfam-A.hmm|PF00281.19 evalue:7.5e-25 score:86.3 best_domain_score:85.6 name:Ribosomal_L5; db:Pfam-A.hmm|PF00673.21 evalue:1.9e-39 score:133.0 best_domain_score:132.4 name:Ribosomal_L5_C;
sprot_desc 50S ribosomal protein L5;
sprot_id sp|Q9Z9K2|RL5_BACHD;
sprot_target db:uniprot_sprot|sp|Q9Z9K2|RL5_BACHD 4 179 evalue:3.2e-61 qcov:91.70 identity:60.80;
111323 110958 CDS
ID metaerg.pl|04120
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02895;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000271.1_22 16 121 evalue:3.1e-39 qcov:87.60 identity:76.40;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.6996; ; 1.41212; 13.128; 0.0162374;
pfam_acc PF17136;
pfam_desc Ribosomal proteins 50S L24/mitochondrial 39S L24;
pfam_id ribosomal_L24;
pfam_target db:Pfam-A.hmm|PF17136.4 evalue:4.4e-26 score:90.3 best_domain_score:90.3 name:ribosomal_L24;
sprot_desc 50S ribosomal protein L24;
sprot_id sp|C3P9R6|RL24_BACAA;
sprot_target db:uniprot_sprot|sp|C3P9R6|RL24_BACAA 18 115 evalue:3.2e-22 qcov:81.00 identity:51.00;
tigrfam_acc TIGR01079;
tigrfam_desc ribosomal protein uL24;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplX_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01079 evalue:2.8e-31 score:107.2 best_domain_score:106.9 name:TIGR01079;
>Feature NODE_23_length_110672_cov_25.9406
82 1848 CDS
ID metaerg.pl|04121
allec_ids 2.7.7.7;
allgo_ids GO:0003677; GO:0003887; GO:0006260; GO:0008408; GO:0006281; GO:0006261;
allko_ids K02335; K02334; K02332; K02349;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441750.1 6 588 evalue:1.3e-175 qcov:99.10 identity:59.50;
kegg_pathway_id 00230; 03030; 00240; 03410; 03420; 03440;
kegg_pathway_name Purine metabolism; DNA replication; Pyrimidine metabolism; Base excision repair; Nucleotide excision repair; Homologous recombination;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00476;
pfam_desc DNA polymerase family A;
pfam_id DNA_pol_A;
pfam_target db:Pfam-A.hmm|PF00476.20 evalue:5.2e-139 score:462.7 best_domain_score:462.4 name:DNA_pol_A;
sprot_desc DNA polymerase I;
sprot_id sp|P0A551|DPO1_MYCBO;
sprot_target db:uniprot_sprot|sp|P0A551|DPO1_MYCBO 46 588 evalue:1.4e-118 qcov:92.30 identity:46.60;
1875 2792 CDS
ID metaerg.pl|04122
allgo_ids GO:0006629;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus sp900102425;
genomedb_acc GCF_900102425.1;
genomedb_target db:genomedb|GCF_900102425.1|WP_091770967.1 10 284 evalue:2.2e-89 qcov:90.20 identity:64.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF01734;
pfam_desc Patatin-like phospholipase;
pfam_id Patatin;
pfam_target db:Pfam-A.hmm|PF01734.22 evalue:2.5e-25 score:89.1 best_domain_score:87.7 name:Patatin;
2786 4063 CDS
ID metaerg.pl|04123
allgo_ids GO:0016746;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora pallida;
genomedb_acc GCF_900090325.1;
genomedb_target db:genomedb|GCF_900090325.1|WP_091651004.1 5 404 evalue:7.8e-69 qcov:94.10 identity:43.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF01553;
pfam_desc Acyltransferase;
pfam_id Acyltransferase;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:2.9e-07 score:29.4 best_domain_score:28.7 name:Acyltransferase;
tm_num 2;
2786 4063 transmembrane_helix
ID metaerg.pl|04124
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology o2828-2896i2933-3001o;
4898 4083 CDS
ID metaerg.pl|04125
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF11350;
pfam_desc Protein of unknown function (DUF3152);
pfam_id DUF3152;
pfam_target db:Pfam-A.hmm|PF11350.8 evalue:4.5e-29 score:100.9 best_domain_score:99.0 name:DUF3152;
sp YES;
tm_num 1;
4083 4163 signal_peptide
ID metaerg.pl|04126
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
4898 4083 transmembrane_helix
ID metaerg.pl|04127
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology i4095-4163o;
5314 4898 CDS
ID metaerg.pl|04128
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667640.1 12 134 evalue:1.4e-30 qcov:89.10 identity:58.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
6038 5406 CDS
ID metaerg.pl|04129
allec_ids 6.3.5.2;
allgo_ids GO:0006284; GO:0008725; GO:0005524; GO:0003922; GO:0016462; GO:0006541;
allko_ids K03388; K03790;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__RSA1;s__RSA1 sp002919305;
genomedb_acc GCA_002919305.1;
genomedb_target db:genomedb|GCA_002919305.1|PKFB01000080.1_83 14 203 evalue:1.5e-49 qcov:90.50 identity:58.10;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-841; PWY-6125; PRPP-PWY; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis I;; superpathway of guanosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF03352;
pfam_desc Methyladenine glycosylase;
pfam_id Adenine_glyco;
pfam_target db:Pfam-A.hmm|PF03352.13 evalue:1e-58 score:197.3 best_domain_score:197.1 name:Adenine_glyco;
sprot_desc Probable GMP synthase [glutamine-hydrolyzing];
sprot_id sp|Q7VG78|GUAA_HELHP;
sprot_target db:uniprot_sprot|sp|Q7VG78|GUAA_HELHP 24 203 evalue:5.9e-32 qcov:85.70 identity:42.20;
6261 7781 CDS
ID metaerg.pl|04130
allgo_ids GO:0003676; GO:0005840; GO:0016779; GO:0003723;
allko_ids K00962; K03049; K03022; K05366; K12818; K02945;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442238.1 30 504 evalue:3.1e-165 qcov:93.90 identity:71.00;
kegg_pathway_id 03020; 00230; 00240; 03010;
kegg_pathway_name RNA polymerase; Purine metabolism; Pyrimidine metabolism; Ribosome;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF09883; PF00575;
pfam_desc Uncharacterized protein conserved in archaea (DUF2110); S1 RNA binding domain;
pfam_id DUF2110; S1;
pfam_target db:Pfam-A.hmm|PF09883.9 evalue:1.8e-05 score:23.7 best_domain_score:8.7 name:DUF2110; db:Pfam-A.hmm|PF00575.23 evalue:1.1e-70 score:233.2 best_domain_score:87.2 name:S1;
sprot_desc 30S ribosomal protein S1;
sprot_id sp|A0QYY6|RS1_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QYY6|RS1_MYCS2 26 392 evalue:3.2e-140 qcov:72.50 identity:69.60;
7813 8448 CDS
ID metaerg.pl|04131
allec_ids 2.7.1.24;
allgo_ids GO:0004140; GO:0005524; GO:0015937; GO:0005737;
allko_ids K00859;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Aeromicrobium;s__Aeromicrobium marinum;
genomedb_acc GCF_000160775.2;
genomedb_target db:genomedb|GCF_000160775.2|WP_007077947.1 4 197 evalue:4.8e-43 qcov:91.90 identity:55.90;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id COA-PWY; PWY-4221; PANTOSYN-PWY; PWY-4242;
metacyc_pathway_name coenzyme A biosynthesis I (prokaryotic);; superpathway of coenzyme A biosynthesis II (plants);; superpathway of coenzyme A biosynthesis I (bacteria);; ;
metacyc_pathway_type CoA-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; ;
pfam_acc PF13521; PF01121;
pfam_desc AAA domain; Dephospho-CoA kinase;
pfam_id AAA_28; CoaE;
pfam_target db:Pfam-A.hmm|PF13521.6 evalue:2.5e-06 score:27.1 best_domain_score:24.3 name:AAA_28; db:Pfam-A.hmm|PF01121.20 evalue:1.8e-56 score:189.9 best_domain_score:189.7 name:CoaE;
sprot_desc Dephospho-CoA kinase;
sprot_id sp|Q2ILC5|COAE_ANADE;
sprot_target db:uniprot_sprot|sp|Q2ILC5|COAE_ANADE 1 204 evalue:1.2e-37 qcov:96.70 identity:48.00;
tigrfam_acc TIGR00152;
tigrfam_desc dephospho-CoA kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00152;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00152 evalue:9.5e-46 score:155.1 best_domain_score:154.9 name:TIGR00152;
8465 10531 CDS
ID metaerg.pl|04132
allec_ids 3.1.25.-;
allgo_ids GO:0005524; GO:0016887; GO:0005737; GO:0009380; GO:0003677; GO:0009381; GO:0006289; GO:0009432;
allko_ids K10896; K05591; K05592; K03702;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442237.1 9 688 evalue:9.7e-303 qcov:98.80 identity:78.80;
kegg_pathway_id 03420;
kegg_pathway_name Nucleotide excision repair;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF07728; PF00271; PF04851; PF02151; PF12344; PF17757;
pfam_desc AAA domain (dynein-related subfamily); Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; UvrB/uvrC motif; Ultra-violet resistance protein B; UvrB interaction domain;
pfam_id AAA_5; Helicase_C; ResIII; UVR; UvrB; UvrB_inter;
pfam_target db:Pfam-A.hmm|PF07728.14 evalue:1.2e-05 score:24.6 best_domain_score:17.6 name:AAA_5; db:Pfam-A.hmm|PF00271.31 evalue:5.7e-19 score:67.7 best_domain_score:66.6 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:1.4e-12 score:47.2 best_domain_score:45.6 name:ResIII; db:Pfam-A.hmm|PF02151.19 evalue:4.4e-06 score:25.5 best_domain_score:25.5 name:UVR; db:Pfam-A.hmm|PF12344.8 evalue:1.2e-20 score:72.3 best_domain_score:71.3 name:UvrB; db:Pfam-A.hmm|PF17757.1 evalue:1e-29 score:101.8 best_domain_score:99.6 name:UvrB_inter;
sprot_desc UvrABC system protein B;
sprot_id sp|Q47QN5|UVRB_THEFY;
sprot_target db:uniprot_sprot|sp|Q47QN5|UVRB_THEFY 17 688 evalue:5.6e-249 qcov:97.70 identity:63.50;
tigrfam_acc TIGR00631;
tigrfam_desc excinuclease ABC subunit B;
tigrfam_mainrole DNA metabolism;
tigrfam_name uvrb;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00631 evalue:0 score:1035.0 best_domain_score:1034.8 name:TIGR00631;
10584 10952 CDS
ID metaerg.pl|04133
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
tm_num 4;
10584 10952 transmembrane_helix
ID metaerg.pl|04134
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology o10611-10670i10707-10775o10788-10856i10890-10943o;
11612 10959 CDS
ID metaerg.pl|04135
allec_ids 3.1.2.6;
allgo_ids GO:0004416; GO:0046872; GO:0019243;
allko_ids K01069;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667620.1 3 217 evalue:6.0e-65 qcov:99.10 identity:55.80;
kegg_pathway_id 00620;
kegg_pathway_name Pyruvate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id METHGLYUT-PWY; PWY-5386;
metacyc_pathway_name superpathway of methylglyoxal degradation;; methylglyoxal degradation I;;
metacyc_pathway_type Aldehyde-Degradation; Super-Pathways;; Methylglyoxal-Detoxification;;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:2.5e-15 score:56.2 best_domain_score:55.6 name:Lactamase_B;
sprot_desc Hydroxyacylglutathione hydrolase;
sprot_id sp|A4SPI6|GLO2_AERS4;
sprot_target db:uniprot_sprot|sp|A4SPI6|GLO2_AERS4 33 196 evalue:3.1e-12 qcov:75.60 identity:33.10;
11690 14680 CDS
ID metaerg.pl|04136
allec_ids 3.1.25.-;
allgo_ids GO:0005524; GO:0005737; GO:0009380; GO:0016887; GO:0003677; GO:0009381; GO:0008270; GO:0006289; GO:0009432;
allko_ids K02006; K06861; K01996; K02045;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667615.1 29 983 evalue:0.0e+00 qcov:95.90 identity:77.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF13191; PF13304; PF13555; PF00005; PF02463; PF17755; PF17760;
pfam_desc AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system; P-loop containing region of AAA domain; ABC transporter; RecF/RecN/SMC N terminal domain; UvrA DNA-binding domain; UvrA interaction domain;
pfam_id AAA_16; AAA_21; AAA_29; ABC_tran; SMC_N; UvrA_DNA-bind; UvrA_inter;
pfam_target db:Pfam-A.hmm|PF13191.6 evalue:1.8e-09 score:37.4 best_domain_score:17.3 name:AAA_16; db:Pfam-A.hmm|PF13304.6 evalue:1.5e-08 score:34.1 best_domain_score:19.1 name:AAA_21; db:Pfam-A.hmm|PF13555.6 evalue:2.5e-08 score:32.8 best_domain_score:16.4 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:4.1e-19 score:68.7 best_domain_score:20.5 name:ABC_tran; db:Pfam-A.hmm|PF02463.19 evalue:1.6e-10 score:40.0 best_domain_score:11.9 name:SMC_N; db:Pfam-A.hmm|PF17755.1 evalue:4.4e-30 score:103.5 best_domain_score:98.5 name:UvrA_DNA-bind; db:Pfam-A.hmm|PF17760.1 evalue:3e-38 score:129.5 best_domain_score:127.8 name:UvrA_inter;
sprot_desc UvrABC system protein A;
sprot_id sp|P63381|UVRA_MYCBO;
sprot_target db:uniprot_sprot|sp|P63381|UVRA_MYCBO 32 994 evalue:0.0e+00 qcov:96.70 identity:66.10;
tigrfam_acc TIGR00630;
tigrfam_desc excinuclease ABC subunit A;
tigrfam_mainrole DNA metabolism;
tigrfam_name uvra;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00630 evalue:0 score:1424.5 best_domain_score:1424.3 name:TIGR00630;
14683 16602 CDS
ID metaerg.pl|04137
allec_ids 3.1.25.-;
allgo_ids GO:0005515; GO:0005737; GO:0009380; GO:0003677; GO:0009381; GO:0006289; GO:0009432;
allko_ids K03703;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667612.1 1 635 evalue:9.8e-225 qcov:99.40 identity:64.20;
kegg_pathway_id 03420;
kegg_pathway_name Nucleotide excision repair;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF01541; PF02151; PF08459;
pfam_desc GIY-YIG catalytic domain; UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal;
pfam_id GIY-YIG; UVR; UvrC_HhH_N;
pfam_target db:Pfam-A.hmm|PF01541.24 evalue:4.6e-09 score:35.7 best_domain_score:34.4 name:GIY-YIG; db:Pfam-A.hmm|PF02151.19 evalue:4.2e-06 score:25.6 best_domain_score:24.4 name:UVR; db:Pfam-A.hmm|PF08459.11 evalue:7.6e-48 score:161.6 best_domain_score:160.8 name:UvrC_HhH_N;
sprot_desc UvrABC system protein C;
sprot_id sp|A8KYR0|UVRC_FRASN;
sprot_target db:uniprot_sprot|sp|A8KYR0|UVRC_FRASN 1 632 evalue:4.7e-173 qcov:98.90 identity:51.30;
tigrfam_acc TIGR00194;
tigrfam_desc excinuclease ABC subunit C;
tigrfam_mainrole DNA metabolism;
tigrfam_name uvrC;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00194 evalue:1.4e-137 score:459.0 best_domain_score:458.5 name:TIGR00194;
16599 17510 CDS
ID metaerg.pl|04138
allgo_ids GO:0005524; GO:0005525;
allko_ids K06958;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441741.1 1 303 evalue:3.4e-90 qcov:100.00 identity:57.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF03668;
pfam_desc P-loop ATPase protein family;
pfam_id ATP_bind_2;
pfam_target db:Pfam-A.hmm|PF03668.15 evalue:2.2e-98 score:328.3 best_domain_score:328.0 name:ATP_bind_2;
sprot_desc Nucleotide-binding protein Franean1_2060;
sprot_id sp|A8KYR1|Y2060_FRASN;
sprot_target db:uniprot_sprot|sp|A8KYR1|Y2060_FRASN 23 303 evalue:4.8e-75 qcov:92.70 identity:52.70;
17507 18490 CDS
ID metaerg.pl|04139
allgo_ids GO:0005737; GO:0008360;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667611.1 2 312 evalue:7.9e-69 qcov:95.10 identity:53.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF01933;
pfam_desc Uncharacterised protein family UPF0052;
pfam_id UPF0052;
pfam_target db:Pfam-A.hmm|PF01933.18 evalue:2.9e-72 score:242.6 best_domain_score:242.4 name:UPF0052;
sprot_desc Putative gluconeogenesis factor;
sprot_id sp|Q9RUF1|GNGF_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RUF1|GNGF_DEIRA 3 314 evalue:1.2e-44 qcov:95.40 identity:41.30;
tigrfam_acc TIGR01826;
tigrfam_desc conserved hypothetical protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name CofD_related;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR01826 evalue:2.2e-81 score:272.8 best_domain_score:272.7 name:TIGR01826;
18487 19515 CDS
ID metaerg.pl|04140
allgo_ids GO:0003677; GO:0007049; GO:0051301; GO:0043937;
allko_ids K09762;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441740.1 7 338 evalue:6.6e-42 qcov:97.10 identity:39.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF02650; PF14527;
pfam_desc WhiA C-terminal HTH domain; WhiA LAGLIDADG-like domain;
pfam_id HTH_WhiA; LAGLIDADG_WhiA;
pfam_target db:Pfam-A.hmm|PF02650.14 evalue:6.8e-16 score:57.6 best_domain_score:57.1 name:HTH_WhiA; db:Pfam-A.hmm|PF14527.6 evalue:5.6e-12 score:44.8 best_domain_score:44.2 name:LAGLIDADG_WhiA;
sprot_desc Probable cell division protein WhiA;
sprot_id sp|B2GH83|WHIA_KOCRD;
sprot_target db:uniprot_sprot|sp|B2GH83|WHIA_KOCRD 69 342 evalue:3.8e-20 qcov:80.10 identity:33.60;
tigrfam_acc TIGR00647;
tigrfam_desc DNA-binding protein WhiA;
tigrfam_mainrole Cellular processes;
tigrfam_name DNA_bind_WhiA;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR00647 evalue:1.5e-32 score:112.3 best_domain_score:111.5 name:TIGR00647;
19600 20604 CDS
ID metaerg.pl|04141
allec_ids 1.2.1.12; 1.2.1.-;
allgo_ids GO:0016620; GO:0055114; GO:0005737; GO:0004365; GO:0051287; GO:0050661; GO:0006006; GO:0006096;
allko_ids K10705; K00134;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667609.1 1 334 evalue:5.6e-139 qcov:100.00 identity:73.70;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id P105-PWY; P41-PWY; PWY-5305; PWY-6537; PWY-321; P122-PWY; GLYCOLYSIS-E-D; 4TOLCARBDEG-PWY; ANARESP1-PWY; GLYCOLYSIS; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; GLUCONEO-PWY; PWY-5537; TOLSULFDEG-PWY; P185-PWY; P124-PWY; P461-PWY; PWY-5484; PWY-5195; PWY-1042; ANAEROFRUCAT-PWY; PWY-3801; PWY-5482; P441-PWY; PWY-5464; ANAGLYCOLYSIS-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS;
metacyc_pathway_name TCA cycle IV (2-oxoglutarate decarboxylase);; pyruvate fermentation to acetate and (S)-lactate I;; bixin biosynthesis;; 4-aminobutanoate degradation II;; cutin biosynthesis;; heterolactic fermentation;; superpathway of glycolysis and the Entner-Doudoroff pathway;; 4-toluenecarboxylate degradation;; ; glycolysis I (from glucose 6-phosphate);; 4-hydroxyphenylacetate degradation;; gluconeogenesis I;; pyruvate fermentation to acetate V;; 4-toluenesulfonate degradation I;; formaldehyde assimilation III (dihydroxyacetone cycle);; Bifidobacterium shunt;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; artemisinin and arteannuin B biosynthesis;; glycolysis IV (plant cytosol);; homolactic fermentation;; sucrose degradation II (sucrose synthase);; pyruvate fermentation to acetate II;; superpathway of N-acetylneuraminate degradation;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;;
metacyc_pathway_type TCA-VARIANTS;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; APOCAROTENOID-SYN;; 4-Aminobutyraye-Degradation;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; ; GLYCOLYSIS-VARIANTS;; AROMATIC-COMPOUNDS-DEGRADATION;; Gluconeogenesis;; Pyruvate-Acetate-Fermentation; Super-Pathways;; 4-Toluenesulfonate-Degradation;; Formaldehyde-Assimilation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SESQUITERPENE-LACTONE;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; SUCROSE-DEG;; Pyruvate-Acetate-Fermentation;; CARBOXYLATES-DEG; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:1.7e-64 score:215.4 best_domain_score:214.9 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:1.4e-39 score:133.7 best_domain_score:132.0 name:Gp_dh_N;
sprot_desc Glyceraldehyde-3-phosphate dehydrogenase;
sprot_id sp|Q9Z518|G3P_STRCO;
sprot_target db:uniprot_sprot|sp|Q9Z518|G3P_STRCO 1 334 evalue:2.4e-120 qcov:100.00 identity:65.20;
tigrfam_acc TIGR01534;
tigrfam_desc glyceraldehyde-3-phosphate dehydrogenase, type I;
tigrfam_mainrole Energy metabolism;
tigrfam_name GAPDH-I;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01534 evalue:5.8e-131 score:435.7 best_domain_score:435.5 name:TIGR01534;
20601 21812 CDS
ID metaerg.pl|04142
allec_ids 2.7.2.3;
allgo_ids GO:0004618; GO:0006096; GO:0005737; GO:0005524;
allko_ids K00927;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669802.1 12 397 evalue:7.0e-136 qcov:95.80 identity:66.90;
kegg_pathway_id 00710; 00010;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id P461-PWY; PWY-5484; CALVIN-PWY; PWY-1042; PWY-3801; ANAEROFRUCAT-PWY; P441-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5464; ANAGLYCOLYSIS-PWY; P122-PWY; GLYCOLYSIS-E-D; GLYCOLYSIS; PHOTOALL-PWY; GLUCONEO-PWY; P185-PWY; P124-PWY;
metacyc_pathway_name hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; Calvin-Benson-Bassham cycle;; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);; homolactic fermentation;; superpathway of N-acetylneuraminate degradation;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; heterolactic fermentation;; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis I (from glucose 6-phosphate);; oxygenic photosynthesis;; gluconeogenesis I;; formaldehyde assimilation III (dihydroxyacetone cycle);; Bifidobacterium shunt;;
metacyc_pathway_type Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Fermentation-to-Lactate; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Photosynthesis; Super-Pathways;; Gluconeogenesis;; Formaldehyde-Assimilation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;;
pfam_acc PF00162;
pfam_desc Phosphoglycerate kinase;
pfam_id PGK;
pfam_target db:Pfam-A.hmm|PF00162.19 evalue:1.1e-135 score:451.6 best_domain_score:451.4 name:PGK;
sprot_desc Phosphoglycerate kinase;
sprot_id sp|A4XDR3|PGK_SALTO;
sprot_target db:uniprot_sprot|sp|A4XDR3|PGK_SALTO 12 398 evalue:9.1e-106 qcov:96.00 identity:56.90;
21809 22612 CDS
ID metaerg.pl|04143
allec_ids 5.3.1.1;
allgo_ids GO:0004807; GO:0005737; GO:0006094; GO:0006096;
allko_ids K01803;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667606.1 9 265 evalue:6.0e-83 qcov:96.30 identity:61.50;
kegg_pathway_id 00710; 00010; 00051;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Fructose and mannose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PHOTOALL-PWY; P185-PWY; GLYCOLYSIS-E-D; PWY-6146; GLYCOLYSIS; P441-PWY; ANAEROFRUCAT-PWY; PWY-1042; PWY-3801; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5464; ANAGLYCOLYSIS-PWY; PWY-5484; PWY66-373; P461-PWY; PWY-6142; P341-PWY; CALVIN-PWY;
metacyc_pathway_name oxygenic photosynthesis;; formaldehyde assimilation III (dihydroxyacetone cycle);; superpathway of glycolysis and the Entner-Doudoroff pathway;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; glycolysis I (from glucose 6-phosphate);; superpathway of N-acetylneuraminate degradation;; homolactic fermentation;; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; glycolysis II (from fructose 6-phosphate);; sucrose degradation V (sucrose α-glucosidase);; hexitol fermentation to lactate, formate, ethanol and acetate;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; glycolysis V (Pyrococcus);; Calvin-Benson-Bassham cycle;;
metacyc_pathway_type Photosynthesis; Super-Pathways;; Formaldehyde-Assimilation;; Energy-Metabolism; Super-Pathways;; Biosynthesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; CARBOXYLATES-DEG; Super-Pathways;; Fermentation-to-Lactate; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Gluconeogenesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;;
pfam_acc PF00121;
pfam_desc Triosephosphate isomerase;
pfam_id TIM;
pfam_target db:Pfam-A.hmm|PF00121.18 evalue:1.3e-81 score:272.8 best_domain_score:272.7 name:TIM;
sprot_desc Triosephosphate isomerase;
sprot_id sp|A4FBM6|TPIS_SACEN;
sprot_target db:uniprot_sprot|sp|A4FBM6|TPIS_SACEN 12 257 evalue:3.2e-67 qcov:92.10 identity:52.00;
tigrfam_acc TIGR00419;
tigrfam_desc triose-phosphate isomerase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tim;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00419 evalue:8.8e-48 score:162.2 best_domain_score:162.0 name:TIGR00419;
22760 23161 CDS
ID metaerg.pl|04144
allgo_ids GO:0003677; GO:0045892; GO:0005737; GO:0046677;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441737.1 1 132 evalue:3.1e-48 qcov:99.20 identity:75.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF03965;
pfam_desc Penicillinase repressor;
pfam_id Penicillinase_R;
pfam_target db:Pfam-A.hmm|PF03965.16 evalue:4.7e-26 score:90.6 best_domain_score:90.4 name:Penicillinase_R;
sprot_desc Transcriptional regulator BlaI;
sprot_id sp|P9WMJ4|BLAI_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WMJ4|BLAI_MYCTO 10 130 evalue:6.6e-13 qcov:91.00 identity:41.00;
23170 24558 CDS
ID metaerg.pl|04145
allgo_ids GO:0004222; GO:0006508;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667598.1 2 454 evalue:5.0e-69 qcov:98.10 identity:40.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF01435; PF05569;
pfam_desc Peptidase family M48; BlaR1 peptidase M56;
pfam_id Peptidase_M48; Peptidase_M56;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:7.8e-11 score:41.3 best_domain_score:30.5 name:Peptidase_M48; db:Pfam-A.hmm|PF05569.11 evalue:1.6e-13 score:49.7 best_domain_score:49.3 name:Peptidase_M56;
tm_num 4;
23170 24558 transmembrane_helix
ID metaerg.pl|04146
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology o23212-23265i23302-23370o23434-23502i24082-24150o;
24650 24877 CDS
ID metaerg.pl|04147
allgo_ids GO:0009306; GO:0015450; GO:0016021; GO:0005886;
allko_ids K03075;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669800.1 9 74 evalue:4.5e-12 qcov:88.00 identity:63.60;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF03840;
pfam_desc Preprotein translocase SecG subunit;
pfam_id SecG;
pfam_target db:Pfam-A.hmm|PF03840.14 evalue:5.7e-15 score:54.4 best_domain_score:54.2 name:SecG;
sprot_desc Protein-export membrane protein SecG;
sprot_id sp|Q9Z521|SECG_STRCO;
sprot_target db:uniprot_sprot|sp|Q9Z521|SECG_STRCO 22 75 evalue:5.2e-07 qcov:72.00 identity:57.40;
tigrfam_acc TIGR00810;
tigrfam_desc preprotein translocase, SecG subunit;
tigrfam_mainrole Protein fate;
tigrfam_name secG;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00810 evalue:2.3e-17 score:62.0 best_domain_score:61.9 name:TIGR00810;
tm_num 2;
24650 24877 transmembrane_helix
ID metaerg.pl|04148
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology i24653-24721o24803-24871i;
25032 26603 CDS
ID metaerg.pl|04149
allko_ids K02035;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667597.1 1 514 evalue:2.2e-73 qcov:98.30 identity:38.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:5.5e-37 score:126.8 best_domain_score:126.5 name:SBP_bac_5;
26686 26770 tRNA
ID metaerg.pl|04150
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
name tRNA_Leu_gag;
27039 27485 CDS
ID metaerg.pl|04151
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668121.1 1 146 evalue:2.1e-45 qcov:98.60 identity:66.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF14347;
pfam_desc Domain of unknown function (DUF4399);
pfam_id DUF4399;
pfam_target db:Pfam-A.hmm|PF14347.6 evalue:1.2e-16 score:60.1 best_domain_score:59.7 name:DUF4399;
sp YES;
27039 27089 lipoprotein_signal_peptide
ID metaerg.pl|04152
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
27657 28628 CDS
ID metaerg.pl|04153
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114;
allko_ids K00356; K03953; K00329;
genomedb_OC d__Bacteria;p__Desulfobacterota_A;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfonatronaceae;g__Desulfonatronum;s__Desulfonatronum thioautotrophicum;
genomedb_acc GCF_000934745.1;
genomedb_target db:genomedb|GCF_000934745.1|WP_052812702.1 2 320 evalue:6.0e-69 qcov:98.80 identity:46.00;
kegg_pathway_id 00190; 05012; 00130;
kegg_pathway_name Oxidative phosphorylation; Parkinson's disease; Ubiquinone biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF01073; PF01370; PF13460; PF07993; PF05368; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; NAD(P)H-binding ; Male sterility protein; NmrA-like family; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; NAD_binding_10; NAD_binding_4; NmrA; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:7.7e-10 score:37.5 best_domain_score:36.6 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:4e-21 score:74.8 best_domain_score:74.2 name:Epimerase; db:Pfam-A.hmm|PF13460.6 evalue:1.2e-20 score:73.4 best_domain_score:73.0 name:NAD_binding_10; db:Pfam-A.hmm|PF07993.12 evalue:1.7e-05 score:23.4 best_domain_score:14.5 name:NAD_binding_4; db:Pfam-A.hmm|PF05368.13 evalue:6.5e-12 score:44.7 best_domain_score:44.2 name:NmrA; db:Pfam-A.hmm|PF04321.17 evalue:1.4e-10 score:40.0 best_domain_score:38.8 name:RmlD_sub_bind;
28691 28969 CDS
ID metaerg.pl|04154
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441728.1 5 92 evalue:1.5e-25 qcov:95.70 identity:64.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF11238;
pfam_desc Protein of unknown function (DUF3039);
pfam_id DUF3039;
pfam_target db:Pfam-A.hmm|PF11238.8 evalue:1.1e-19 score:69.2 best_domain_score:68.8 name:DUF3039;
31571 28992 CDS
ID metaerg.pl|04155
allec_ids 3.4.11.2;
allgo_ids GO:0008237; GO:0008270; GO:0005737; GO:0004177;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667555.1 1 858 evalue:8.1e-291 qcov:99.90 identity:59.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-4061; PWY-4041;
metacyc_pathway_name glutathione-mediated detoxification I;; γ-glutamyl cycle;;
metacyc_pathway_type Detoxification; Other-Degradation;; Reductants; Super-Pathways;;
pfam_acc PF11838; PF01433; PF17900;
pfam_desc ERAP1-like C-terminal domain; Peptidase family M1 domain; Peptidase M1 N-terminal domain;
pfam_id ERAP1_C; Peptidase_M1; Peptidase_M1_N;
pfam_target db:Pfam-A.hmm|PF11838.8 evalue:7.4e-47 score:159.6 best_domain_score:159.6 name:ERAP1_C; db:Pfam-A.hmm|PF01433.20 evalue:3.6e-57 score:192.6 best_domain_score:191.8 name:Peptidase_M1; db:Pfam-A.hmm|PF17900.1 evalue:1e-16 score:60.9 best_domain_score:59.7 name:Peptidase_M1_N;
sprot_desc Aminopeptidase N;
sprot_id sp|Q11010|AMPN_STRLI;
sprot_target db:uniprot_sprot|sp|Q11010|AMPN_STRLI 1 858 evalue:3.7e-205 qcov:99.90 identity:46.60;
tigrfam_acc TIGR02412;
tigrfam_desc aminopeptidase N;
tigrfam_name pepN_strep_liv;
tigrfam_target db:TIGRFAMs.hmm|TIGR02412 evalue:8.3e-282 score:936.5 best_domain_score:936.3 name:TIGR02412;
31693 33525 CDS
ID metaerg.pl|04156
allec_ids 6.2.1.3;
allgo_ids GO:0003824; GO:0003996; GO:0005524; GO:0102391; GO:0004467; GO:0006633;
allko_ids K01652; K01897; K01895; K01784; K01909; K01904; K01586; K05939; K02364; K00992; K01779; K01776; K00143; K03367;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667553.1 10 607 evalue:4.2e-209 qcov:98.00 identity:61.30;
kegg_pathway_id 00660; 00471; 00052; 00071; 00473; 00252; 00251; 01053; 00770; 00564; 00010; 00310; 00290; 00650; 00640; 00300; 00620; 00940; 00520; 00720;
kegg_pathway_name C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Galactose metabolism; Fatty acid metabolism; D-Alanine metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Glycerophospholipid metabolism; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine biosynthesis; Butanoate metabolism; Propanoate metabolism; Lysine biosynthesis; Pyruvate metabolism; Phenylpropanoid biosynthesis; Nucleotide sugars metabolism; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-561; PWY-6001; PWY-6000; PWY-5136; PWY-5995; PWY-5972; P221-PWY; PWY-5143; FAO-PWY;
metacyc_pathway_name superpathway of glyoxylate cycle and fatty acid degradation;; linoleate biosynthesis II (animals);; γ-linolenate biosynthesis II (animals);; fatty acid β-oxidation II (peroxisome);; linoleate biosynthesis I (plants);; stearate biosynthesis I (animals and fungi);; octane oxidation;; long-chain fatty acid activation;; fatty acid β-oxidation I;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Linoleate-Biosynthesis;; Gamma-linolenate-Biosynthesis;; Fatty-Acid-Degradation;; Linoleate-Biosynthesis;; Stearate-Biosynthesis;; Other-Degradation;; Activation; Lipid-Biosynthesis;; Fatty-Acid-Degradation;;
pfam_acc PF00501;
pfam_desc AMP-binding enzyme;
pfam_id AMP-binding;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:2.8e-89 score:298.8 best_domain_score:298.6 name:AMP-binding;
sprot_desc Long-chain-fatty-acid--CoA ligase FadD15;
sprot_id sp|Q7TYX8|FAC15_MYCBO;
sprot_target db:uniprot_sprot|sp|Q7TYX8|FAC15_MYCBO 10 605 evalue:1.0e-145 qcov:97.70 identity:47.60;
33654 33908 CDS
ID metaerg.pl|04157
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
35014 33923 CDS
ID metaerg.pl|04158
allgo_ids GO:0005525; GO:0005737; GO:0005524; GO:0016887; GO:0046872; GO:0043023; GO:0043022;
allko_ids K06942;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667549.1 1 363 evalue:2.9e-128 qcov:100.00 identity:66.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF02421; PF01926; PF06071;
pfam_desc Ferrous iron transport protein B; 50S ribosome-binding GTPase; Protein of unknown function (DUF933);
pfam_id FeoB_N; MMR_HSR1; YchF-GTPase_C;
pfam_target db:Pfam-A.hmm|PF02421.18 evalue:9e-09 score:34.3 best_domain_score:32.1 name:FeoB_N; db:Pfam-A.hmm|PF01926.23 evalue:5.2e-23 score:80.5 best_domain_score:79.5 name:MMR_HSR1; db:Pfam-A.hmm|PF06071.13 evalue:3.4e-35 score:119.3 best_domain_score:118.2 name:YchF-GTPase_C;
sprot_desc Ribosome-binding ATPase YchF;
sprot_id sp|P37518|YCHF_BACSU;
sprot_target db:uniprot_sprot|sp|P37518|YCHF_BACSU 1 363 evalue:1.1e-105 qcov:100.00 identity:51.90;
tigrfam_acc TIGR00092;
tigrfam_desc GTP-binding protein YchF;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00092;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00092 evalue:9.8e-138 score:458.4 best_domain_score:458.2 name:TIGR00092;
35123 35782 CDS
ID metaerg.pl|04159
allec_ids 3.1.-.-;
allgo_ids GO:0004519; GO:0005737; GO:0003677; GO:0000014;
allko_ids K07503;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669786.1 1 217 evalue:6.4e-91 qcov:99.10 identity:77.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01939;
pfam_desc Endonuclease NucS;
pfam_id NucS;
pfam_target db:Pfam-A.hmm|PF01939.16 evalue:5.5e-62 score:208.3 best_domain_score:208.1 name:NucS;
sprot_desc Endonuclease NucS;
sprot_id sp|Q0RDC6|NUCS_FRAAA;
sprot_target db:uniprot_sprot|sp|Q0RDC6|NUCS_FRAAA 1 217 evalue:3.9e-63 qcov:99.10 identity:60.10;
36445 35825 CDS
ID metaerg.pl|04160
allgo_ids GO:0016787;
allko_ids K03574; K03575; K01529; K01515; K08310;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Ilumatobacteraceae;g__UBA3006;s__UBA3006 sp001438985;
genomedb_acc GCA_001438985.1;
genomedb_target db:genomedb|GCA_001438985.1|KRO43766.1 10 188 evalue:3.1e-31 qcov:86.90 identity:43.60;
kegg_pathway_id 03410; 00230; 00790;
kegg_pathway_name Base excision repair; Purine metabolism; Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:5.6e-15 score:54.8 best_domain_score:54.2 name:NUDIX;
37086 36481 CDS
ID metaerg.pl|04161
allec_ids 5.4.2.11;
allgo_ids GO:0046538; GO:0006094; GO:0006096;
allko_ids K01834; K02226; K01842; K15640; K01837; K15634; K01103; K00560;
genomedb_OC d__Bacteria;p__Armatimonadota;c__Fimbriimonadia;o__Fimbriimonadales;f__Fimbriimonadaceae;g__UBA8783;s__UBA8783 sp003516955;
genomedb_acc GCA_003516955.1;
genomedb_target db:genomedb|GCA_003516955.1|HCE00819.1 1 200 evalue:4.4e-78 qcov:99.50 identity:71.50;
kegg_pathway_id 00010; 00051; 00860; 00670; 00240;
kegg_pathway_name Glycolysis / Gluconeogenesis; Fructose and mannose metabolism; Porphyrin and chlorophyll metabolism; One carbon pool by folate; Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00300;
pfam_desc Histidine phosphatase superfamily (branch 1);
pfam_id His_Phos_1;
pfam_target db:Pfam-A.hmm|PF00300.22 evalue:2e-48 score:163.9 best_domain_score:163.7 name:His_Phos_1;
sprot_desc 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase;
sprot_id sp|A7HZ35|GPMA_PARL1;
sprot_target db:uniprot_sprot|sp|A7HZ35|GPMA_PARL1 4 200 evalue:1.7e-57 qcov:98.00 identity:56.50;
tigrfam_acc TIGR01258;
tigrfam_desc phosphoglycerate mutase 1 family;
tigrfam_name pgm_1;
tigrfam_target db:TIGRFAMs.hmm|TIGR01258 evalue:3.9e-69 score:231.9 best_domain_score:154.1 name:TIGR01258;
37254 39917 CDS
ID metaerg.pl|04162
allec_ids 4.2.1.3;
allgo_ids GO:0047456; GO:0051539; GO:0003994; GO:0046872; GO:0003730; GO:0003729; GO:0006099;
allko_ids K01704; K01702; K01681; K01703; K01682;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441723.1 2 887 evalue:0.0e+00 qcov:99.90 identity:68.70;
kegg_pathway_id 00020; 00630; 00720; 00290;
kegg_pathway_name Citrate cycle (TCA cycle); Glyoxylate and dicarboxylate metabolism; Reductive carboxylate cycle (CO2 fixation); Valine, leucine and isoleucine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-5913; TCA; PWY-5750; TCA-GLYOX-BYPASS; ANARESP1-PWY; PWY-5690; P105-PWY; PWY-6549; P23-PWY; PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; REDCITCYC; PWY-5392; PWY-561; GLYOXYLATE-BYPASS; FERMENTATION-PWY;
metacyc_pathway_name partial TCA cycle (obligate autotrophs);; TCA cycle I (prokaryotic);; itaconate biosynthesis I;; superpathway of glyoxylate bypass and TCA;; ; TCA cycle II (plants and fungi);; TCA cycle IV (2-oxoglutarate decarboxylase);; L-glutamine biosynthesis III;; reductive TCA cycle I;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; TCA cycle VIII (Helicobacter);; reductive TCA cycle II;; superpathway of glyoxylate cycle and fatty acid degradation;; glyoxylate cycle;; mixed acid fermentation;;
metacyc_pathway_type TCA-VARIANTS;; TCA-VARIANTS;; Itaconate-Biosynthesis;; Super-Pathways; TCA-VARIANTS;; ; TCA-VARIANTS;; TCA-VARIANTS;; GLUTAMINE-SYN;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; TCA-VARIANTS;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;;
pfam_acc PF00330; PF00694;
pfam_desc Aconitase family (aconitate hydratase); Aconitase C-terminal domain;
pfam_id Aconitase; Aconitase_C;
pfam_target db:Pfam-A.hmm|PF00330.20 evalue:3e-176 score:586.2 best_domain_score:585.8 name:Aconitase; db:Pfam-A.hmm|PF00694.19 evalue:5e-38 score:129.6 best_domain_score:128.9 name:Aconitase_C;
sprot_desc Aconitate hydratase A;
sprot_id sp|A0QX20|ACNA_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QX20|ACNA_MYCS2 1 884 evalue:0.0e+00 qcov:99.70 identity:61.40;
tigrfam_acc TIGR01341;
tigrfam_desc aconitate hydratase 1;
tigrfam_mainrole Energy metabolism;
tigrfam_name aconitase_1;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01341 evalue:0 score:1318.3 best_domain_score:1318.0 name:TIGR01341;
39917 40624 CDS
ID metaerg.pl|04163
allec_ids 1.8.4.11;
allgo_ids GO:0008113; GO:0055114; GO:0006464;
allko_ids K07304; K12267; K07305;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Ilumatobacteraceae;g__Ilumatobacter;s__Ilumatobacter coccineus;
genomedb_acc GCA_000348785.1;
genomedb_target db:genomedb|GCA_000348785.1|BAN00963.1 14 210 evalue:6.7e-70 qcov:83.80 identity:58.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF01625;
pfam_desc Peptide methionine sulfoxide reductase;
pfam_id PMSR;
pfam_target db:Pfam-A.hmm|PF01625.21 evalue:4.5e-60 score:201.5 best_domain_score:201.2 name:PMSR;
sprot_desc Peptide methionine sulfoxide reductase MsrA;
sprot_id sp|A8M3K6|MSRA_SALAI;
sprot_target db:uniprot_sprot|sp|A8M3K6|MSRA_SALAI 4 204 evalue:4.1e-66 qcov:85.50 identity:60.10;
tigrfam_acc TIGR00401;
tigrfam_desc peptide-methionine (S)-S-oxide reductase;
tigrfam_mainrole Cellular processes;
tigrfam_name msrA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00401 evalue:9.9e-56 score:187.5 best_domain_score:187.2 name:TIGR00401;
40621 43035 CDS
ID metaerg.pl|04164
allec_ids 2.4.1.64;
allgo_ids GO:0003824; GO:0005975; GO:0047656; GO:0030246; GO:0005993;
allko_ids K01838; K00691; K05342; K01194; K10231;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441722.1 1 795 evalue:0.0e+00 qcov:98.90 identity:67.30;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-2722;
metacyc_pathway_name trehalose degradation IV;;
metacyc_pathway_type Trehalose-Degradation;;
pfam_acc PF03633; PF03632; PF03636;
pfam_desc Glycosyl hydrolase family 65, C-terminal domain ; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain;
pfam_id Glyco_hydro_65C; Glyco_hydro_65m; Glyco_hydro_65N;
pfam_target db:Pfam-A.hmm|PF03633.15 evalue:4e-17 score:61.1 best_domain_score:60.3 name:Glyco_hydro_65C; db:Pfam-A.hmm|PF03632.15 evalue:4.5e-126 score:420.0 best_domain_score:419.7 name:Glyco_hydro_65m; db:Pfam-A.hmm|PF03636.15 evalue:2.2e-62 score:209.9 best_domain_score:209.2 name:Glyco_hydro_65N;
sprot_desc Alpha,alpha-trehalose phosphorylase;
sprot_id sp|Q8L164|TREP_THEBR;
sprot_target db:uniprot_sprot|sp|Q8L164|TREP_THEBR 13 778 evalue:9.4e-171 qcov:95.30 identity:41.50;
43032 43979 CDS
ID metaerg.pl|04165
allec_ids 2.1.1.220;
allgo_ids GO:0016429; GO:0030488; GO:0031515;
allko_ids K07442;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442226.1 11 306 evalue:2.7e-98 qcov:94.00 identity:63.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF08704; PF14801; PF13847; PF01135;
pfam_desc tRNA methyltransferase complex GCD14 subunit; tRNA methyltransferase complex GCD14 subunit N-term; Methyltransferase domain; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
pfam_id GCD14; GCD14_N; Methyltransf_31; PCMT;
pfam_target db:Pfam-A.hmm|PF08704.10 evalue:4.9e-28 score:97.7 best_domain_score:93.7 name:GCD14; db:Pfam-A.hmm|PF14801.6 evalue:1.2e-15 score:56.2 best_domain_score:55.4 name:GCD14_N; db:Pfam-A.hmm|PF13847.6 evalue:2.1e-07 score:30.1 best_domain_score:29.6 name:Methyltransf_31; db:Pfam-A.hmm|PF01135.19 evalue:2.8e-10 score:39.5 best_domain_score:38.8 name:PCMT;
sprot_desc tRNA (adenine(58)-N(1))-methyltransferase TrmI;
sprot_id sp|P9WFZ0|TRMI_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WFZ0|TRMI_MYCTO 18 286 evalue:1.1e-58 qcov:85.40 identity:45.20;
43954 45735 CDS
ID metaerg.pl|04166
allec_ids 3.6.4.8;
allgo_ids GO:0005524; GO:0000502; GO:0016887; GO:0019941; GO:0010498;
allko_ids K00733; K13527;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669781.1 39 580 evalue:1.3e-178 qcov:91.40 identity:60.70;
kegg_pathway_id 01030;
kegg_pathway_name Glycan structures - biosynthesis 1;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00004; PF13191; PF13401; PF16450; PF17758;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA ATPase domain; AAA domain; Proteasomal ATPase OB C-terminal domain; Proteasomal ATPase OB N-terminal domain;
pfam_id AAA; AAA_16; AAA_22; Prot_ATP_ID_OB; Prot_ATP_OB_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:6.9e-46 score:155.2 best_domain_score:154.3 name:AAA; db:Pfam-A.hmm|PF13191.6 evalue:4.7e-09 score:36.1 best_domain_score:23.6 name:AAA_16; db:Pfam-A.hmm|PF13401.6 evalue:2.4e-06 score:27.1 best_domain_score:25.3 name:AAA_22; db:Pfam-A.hmm|PF16450.5 evalue:2.1e-12 score:46.0 best_domain_score:43.2 name:Prot_ATP_ID_OB; db:Pfam-A.hmm|PF17758.1 evalue:2.9e-13 score:48.5 best_domain_score:48.5 name:Prot_ATP_OB_N;
sprot_desc Proteasome-associated ATPase;
sprot_id sp|B1W303|ARC_STRGG;
sprot_target db:uniprot_sprot|sp|B1W303|ARC_STRGG 80 591 evalue:4.5e-162 qcov:86.30 identity:58.60;
tigrfam_acc TIGR03689;
tigrfam_desc proteasome ATPase;
tigrfam_mainrole Protein fate;
tigrfam_name pup_AAA;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR03689 evalue:5.8e-216 score:717.3 best_domain_score:717.0 name:TIGR03689;
45780 47285 CDS
ID metaerg.pl|04167
allec_ids 3.4.-.-; 6.3.2.-;
allgo_ids GO:0010498; GO:0019941; GO:0005524; GO:0016811; GO:0046872; GO:0008233;
allko_ids K13571; K20814;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441721.1 6 490 evalue:5.1e-160 qcov:96.80 identity:59.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-6455;
metacyc_pathway_name vancomycin resistance II;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Vancomycin-Resistnace;;
pfam_acc PF03136;
pfam_desc Pup-ligase protein;
pfam_id Pup_ligase;
pfam_target db:Pfam-A.hmm|PF03136.15 evalue:2.6e-154 score:513.7 best_domain_score:513.4 name:Pup_ligase;
sprot_desc Depupylase;
sprot_id sp|A0LU48|DOP_ACIC1;
sprot_target db:uniprot_sprot|sp|A0LU48|DOP_ACIC1 6 490 evalue:3.5e-123 qcov:96.80 identity:48.80;
tigrfam_acc TIGR03688;
tigrfam_desc proteasome accessory factor PafA2;
tigrfam_mainrole Protein fate;
tigrfam_name pupylate_PafA2;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR03688 evalue:1.3e-158 score:527.9 best_domain_score:527.7 name:TIGR03688;
47400 47597 CDS
ID metaerg.pl|04168
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia sp000220985;
genomedb_acc GCF_000220985.1;
genomedb_target db:genomedb|GCF_000220985.1|WP_029514126.1 13 65 evalue:5.9e-08 qcov:81.50 identity:62.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF05639;
pfam_desc Pup-like protein;
pfam_id Pup;
pfam_target db:Pfam-A.hmm|PF05639.11 evalue:5.9e-21 score:74.4 best_domain_score:74.3 name:Pup;
tigrfam_acc TIGR03687;
tigrfam_desc ubiquitin-like protein Pup;
tigrfam_mainrole Protein fate;
tigrfam_name pupylate_cterm;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR03687 evalue:8.7e-20 score:69.6 best_domain_score:69.1 name:TIGR03687;
47634 49019 CDS
ID metaerg.pl|04169
allec_ids 6.3.1.19; 6.3.2.-;
allgo_ids GO:0010498; GO:0019941; GO:0005524; GO:0016879; GO:0000287; GO:0019787; GO:0070490;
allko_ids K13571;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667528.1 1 452 evalue:2.2e-165 qcov:98.00 identity:61.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-6455;
metacyc_pathway_name vancomycin resistance II;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Vancomycin-Resistnace;;
pfam_acc PF03136;
pfam_desc Pup-ligase protein;
pfam_id Pup_ligase;
pfam_target db:Pfam-A.hmm|PF03136.15 evalue:1.4e-148 score:494.8 best_domain_score:493.2 name:Pup_ligase;
sprot_desc Pup--protein ligase;
sprot_id sp|A8M2A6|PAFA_SALAI;
sprot_target db:uniprot_sprot|sp|A8M2A6|PAFA_SALAI 1 452 evalue:6.2e-151 qcov:98.00 identity:58.70;
tigrfam_acc TIGR03686;
tigrfam_desc Pup--protein ligase;
tigrfam_mainrole Protein fate;
tigrfam_name pupylate_PafA;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR03686 evalue:4.2e-186 score:618.2 best_domain_score:618.0 name:TIGR03686;
49131 50183 CDS
ID metaerg.pl|04170
casgene_acc COG2378_WYL_CAS-I:CAS-III; pfam13280_WYL_CAS-I:CAS-III;
casgene_name WYL; WYL;
casgene_target db:casgenes.hmm|COG2378_WYL_CAS-I:CAS-III evalue:1.6e-30 score:105.9 best_domain_score:97.5 name:WYL; db:casgenes.hmm|pfam13280_WYL_CAS-I:CAS-III evalue:2.9e-28 score:98.3 best_domain_score:97.1 name:WYL;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667525.1 6 345 evalue:5.3e-71 qcov:97.10 identity:48.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF13280;
pfam_desc WYL domain;
pfam_id WYL;
pfam_target db:Pfam-A.hmm|PF13280.6 evalue:1.1e-25 score:89.8 best_domain_score:88.8 name:WYL;
sprot_desc hypothetical protein;
sprot_id sp|P64942|PAFB_MYCBO;
sprot_target db:uniprot_sprot|sp|P64942|PAFB_MYCBO 1 257 evalue:2.7e-29 qcov:73.40 identity:36.20;
50180 51133 CDS
ID metaerg.pl|04171
casgene_acc COG2378_WYL_CAS-I:CAS-III; pfam13280_WYL_CAS-I:CAS-III;
casgene_name WYL; WYL;
casgene_target db:casgenes.hmm|COG2378_WYL_CAS-I:CAS-III evalue:6.4e-24 score:84.2 best_domain_score:83.6 name:WYL; db:casgenes.hmm|pfam13280_WYL_CAS-I:CAS-III evalue:3.7e-27 score:94.7 best_domain_score:94.1 name:WYL;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667524.1 9 301 evalue:5.3e-70 qcov:92.40 identity:48.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF13280;
pfam_desc WYL domain;
pfam_id WYL;
pfam_target db:Pfam-A.hmm|PF13280.6 evalue:4.4e-26 score:91.2 best_domain_score:90.7 name:WYL;
51138 51368 CDS
ID metaerg.pl|04172
allgo_ids GO:0008565; GO:0015031; GO:0005887; GO:0033281; GO:0008320; GO:0015628; GO:0043953;
allko_ids K03116;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF02416;
pfam_desc mttA/Hcf106 family;
pfam_id MttA_Hcf106;
pfam_target db:Pfam-A.hmm|PF02416.16 evalue:4.3e-14 score:50.8 best_domain_score:50.6 name:MttA_Hcf106;
sp YES;
sprot_desc Sec-independent protein translocase protein TatA;
sprot_id sp|Q30PL2|TATA_SULDN;
sprot_target db:uniprot_sprot|sp|Q30PL2|TATA_SULDN 1 58 evalue:1.2e-06 qcov:76.30 identity:46.60;
tigrfam_acc TIGR01411;
tigrfam_desc twin arginine-targeting protein translocase, TatA/E family;
tigrfam_mainrole Protein fate;
tigrfam_name tatAE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01411 evalue:3.2e-16 score:57.8 best_domain_score:57.6 name:TIGR01411;
tm_num 1;
51138 51224 signal_peptide
ID metaerg.pl|04173
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
51138 51368 transmembrane_helix
ID metaerg.pl|04174
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology o51150-51203i;
51365 52141 CDS
ID metaerg.pl|04175
allgo_ids GO:0016021; GO:0005887; GO:0033281; GO:0008320; GO:0043953;
allko_ids K03118;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667521.1 18 256 evalue:4.3e-70 qcov:92.60 identity:58.40;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00902;
pfam_desc Sec-independent protein translocase protein (TatC);
pfam_id TatC;
pfam_target db:Pfam-A.hmm|PF00902.18 evalue:1.7e-58 score:197.1 best_domain_score:196.8 name:TatC;
sprot_desc Sec-independent protein translocase protein TatC;
sprot_id sp|Q2J9S4|TATC_FRACC;
sprot_target db:uniprot_sprot|sp|Q2J9S4|TATC_FRACC 18 257 evalue:1.6e-42 qcov:93.00 identity:39.40;
tigrfam_acc TIGR00945;
tigrfam_desc twin arginine-targeting protein translocase TatC;
tigrfam_mainrole Protein fate;
tigrfam_name tatC;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00945 evalue:8.2e-56 score:188.5 best_domain_score:188.3 name:TIGR00945;
tm_num 6;
51365 52141 transmembrane_helix
ID metaerg.pl|04176
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology i51467-51535o51617-51685i51722-51790o51869-51937i51974-52033o52043-52111i;
52148 52768 CDS
ID metaerg.pl|04177
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
sp YES;
tm_num 1;
52148 52306 signal_peptide
ID metaerg.pl|04178
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
52148 52768 transmembrane_helix
ID metaerg.pl|04179
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology i52226-52279o;
52765 55206 CDS
ID metaerg.pl|04180
allec_ids 3.6.4.-;
allgo_ids GO:0003676; GO:0005524; GO:0004386;
allko_ids K03578; K13184; K12598; K03579; K10896; K14442; K13185; K03725; K12854; K05591; K03727;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667519.1 21 813 evalue:2.8e-248 qcov:97.50 identity:54.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00270; PF08148; PF00271; PF04851;
pfam_desc DEAD/DEAH box helicase; DSHCT (NUC185) domain; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit;
pfam_id DEAD; DSHCT; Helicase_C; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:2.3e-22 score:78.8 best_domain_score:78.0 name:DEAD; db:Pfam-A.hmm|PF08148.12 evalue:5.8e-27 score:93.6 best_domain_score:92.5 name:DSHCT; db:Pfam-A.hmm|PF00271.31 evalue:1.8e-05 score:24.3 best_domain_score:22.8 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:2.1e-08 score:33.6 best_domain_score:33.0 name:ResIII;
sprot_desc Probable helicase HelY;
sprot_id sp|P9WMR0|HELY_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WMR0|HELY_MYCTO 18 811 evalue:5.8e-168 qcov:97.70 identity:41.70;
55245 56174 CDS
ID metaerg.pl|04181
allec_ids 2.7.-.-; 2.7.1.-;
allgo_ids GO:0016301; GO:0005739; GO:0005524; GO:0017050; GO:0003951; GO:0006671; GO:0009409;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441719.1 1 309 evalue:5.5e-80 qcov:100.00 identity:55.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-5107; PLPSAL-PWY; LIPA-CORESYN-PWY; PWY0-1261; PWY-6577; PWY-5381; P1-PWY; PWY0-163; LPSSYN-PWY; PWY0-845;
metacyc_pathway_name phytol salvage pathway;; pyridoxal 5'-phosphate salvage I;; lipid A-core biosynthesis (E. coli K-12);; anhydromuropeptides recycling I;; farnesylcysteine salvage pathway;; pyridine nucleotide cycling (plants);; ; ; superpathway of lipopolysaccharide biosynthesis;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;;
metacyc_pathway_type DITERPENOID-SYN;; Vitamin-B6-Biosynthesis;; Glycan-Biosynthesis; Lipid-Biosynthesis;; Anhydromuropeptides-Recycling;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; NAD-Metabolism;; ; ; Lipid-Biosynthesis; Super-Pathways;; Super-Pathways; Vitamin-B6-Biosynthesis;;
pfam_acc PF00781;
pfam_desc Diacylglycerol kinase catalytic domain;
pfam_id DAGK_cat;
pfam_target db:Pfam-A.hmm|PF00781.24 evalue:5.7e-28 score:96.3 best_domain_score:95.7 name:DAGK_cat;
sprot_desc Sphingoid long-chain bases kinase 2, mitochondrial;
sprot_id sp|O82359|LCKB2_ARATH;
sprot_target db:uniprot_sprot|sp|O82359|LCKB2_ARATH 9 301 evalue:4.5e-28 qcov:94.80 identity:32.20;
tigrfam_acc TIGR00147;
tigrfam_desc lipid kinase, YegS/Rv2252/BmrU family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00147;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00147 evalue:4.2e-39 score:133.4 best_domain_score:133.2 name:TIGR00147;
56225 57355 CDS
ID metaerg.pl|04182
allec_ids 3.4.13.-;
allgo_ids GO:0016787; GO:0016021; GO:0005886; GO:0046872;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108666306.1 12 376 evalue:3.1e-101 qcov:97.10 identity:53.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF01321; PF00557;
pfam_desc Creatinase/Prolidase N-terminal domain; Metallopeptidase family M24;
pfam_id Creatinase_N; Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF01321.18 evalue:1.2e-17 score:64.0 best_domain_score:63.2 name:Creatinase_N; db:Pfam-A.hmm|PF00557.24 evalue:7.2e-58 score:194.9 best_domain_score:194.5 name:Peptidase_M24;
sprot_desc Probable dipeptidase PepE;
sprot_id sp|P65811|PEPE_MYCBO;
sprot_target db:uniprot_sprot|sp|P65811|PEPE_MYCBO 9 376 evalue:5.0e-74 qcov:97.90 identity:46.50;
57355 57774 CDS
ID metaerg.pl|04183
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441717.1 3 139 evalue:3.2e-35 qcov:98.60 identity:56.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00583;
pfam_desc Acetyltransferase (GNAT) family;
pfam_id Acetyltransf_1;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:9e-10 score:38.1 best_domain_score:37.9 name:Acetyltransf_1;
57755 58084 CDS
ID metaerg.pl|04184
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
tm_num 3;
57755 58084 transmembrane_helix
ID metaerg.pl|04185
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology i57839-57907o57917-57973i58010-58078o;
58236 58649 CDS
ID metaerg.pl|04186
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667508.1 3 137 evalue:4.7e-07 qcov:98.50 identity:41.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
58678 60396 CDS
ID metaerg.pl|04187
allec_ids 2.3.1.269; 2.3.1.-;
allgo_ids GO:0006807; GO:0016021; GO:0005886; GO:0016410; GO:0042158;
allko_ids K03820;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667507.1 39 563 evalue:2.6e-107 qcov:91.80 identity:44.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id KDO-NAGLIPASYN-PWY; PWY-4801; PWY-5184; BENZCOA-PWY; PWY-6312; PWY-6442; PWY-6418; PWY1-3; PWY-6397; PWY-5080; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-6310; PWY-5139; PWY-5477; PWY-5981; PWY-5437; PWY-6113; PWY-6413; FASYN-INITIAL-PWY; PWYG-321; PWY-6432; PWY1A0-6325; LPSSYN-PWY; PWY-5965; PWY-5209; PWY-5400; PWY-5307; PWY-6318; PWY-5405; PWY-5972; PWY-5393; PWY-6412; KDO-LIPASYN-PWY; PWY-6438; THREOCAT-PWY; PWY-84; ECASYN-PWY; P3-PWY; PWY-6295; PWY-6515; PWY-5284; PWY-6316; CENTBENZCOA-PWY; PWY-6404; PWY-5313; PWY-5140; PWY-6411; PWY0-881; PWY-5987; PWY-5268;
metacyc_pathway_name superpathway of (Kdo)2-lipid A biosynthesis;; aloesone biosynthesis I;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; polyhydroxybutanoate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; very long chain fatty acid biosynthesis I;; sophorolipid biosynthesis;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; gallotannin biosynthesis;; CDP-diacylglycerol biosynthesis III;; L-threonine degradation I;; superpathway of mycolate biosynthesis;; ginsenoside degradation III;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; curcuminoid biosynthesis;; actinorhodin biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; amaranthin biosynthesis;; gentiodelphin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; raspberry ketone biosynthesis;; ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; resveratrol biosynthesis;; enterobacterial common antigen biosynthesis;; gallate degradation III (anaerobic);; ; phloridzin biosynthesis;; shisonin biosynthesis;; aromatic polyketides biosynthesis;; benzoyl-CoA degradation II (anaerobic);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; cannabinoid biosynthesis;; ginsenoside degradation I;; superpathway of fatty acid biosynthesis I (E. coli);; sorgoleone biosynthesis;; salvianin biosynthesis;;
metacyc_pathway_type Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; Storage-Compounds-Biosynthesis;; Cell-Wall-Biosynthesis;; Fatty-acid-biosynthesis;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; GALLOTANNINS;; CDP-diacylglycerol-Biosynthesis;; THREONINE-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOID-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; METHANOGENESIS;; BETALAIN-ALKALOIDS;; ANTHOCYANIN-SYN;; PHENYLALANINE-DEG;; BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; POLYKETIDE-SYN;; Ginsenoside-Degradation;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; GALLATE-DEG;; ; FLAVONOID-SYN;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Benzoyl-CoA-Degradation;; Cell-Wall-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN; Super-Pathways;; TERPENOPHENOLICS-SYN;; Ginsenoside-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; QUINONE-SYN;; ANTHOCYANIN-SYN;;
pfam_acc PF00795;
pfam_desc Carbon-nitrogen hydrolase;
pfam_id CN_hydrolase;
pfam_target db:Pfam-A.hmm|PF00795.22 evalue:1.4e-11 score:43.5 best_domain_score:41.1 name:CN_hydrolase;
sprot_desc Apolipoprotein N-acyltransferase;
sprot_id sp|Q608N5|LNT_METCA;
sprot_target db:uniprot_sprot|sp|Q608N5|LNT_METCA 41 567 evalue:1.9e-24 qcov:92.10 identity:27.60;
tigrfam_acc TIGR00546;
tigrfam_desc apolipoprotein N-acyltransferase;
tigrfam_mainrole Protein fate;
tigrfam_name lnt;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00546 evalue:2.6e-60 score:203.8 best_domain_score:202.5 name:TIGR00546;
tm_num 8;
58678 60396 transmembrane_helix
ID metaerg.pl|04188
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology i58786-58854o58864-58932i58969-59028o59041-59109i59170-59229o59272-59340i59374-59427o60244-60312i;
60430 60505 tRNA
ID metaerg.pl|04189
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
name tRNA_Glu_ttc;
62586 60577 CDS
ID metaerg.pl|04190
allec_ids 7.1.3.1; 3.6.1.1;
allgo_ids GO:0004427; GO:0009678; GO:0016020; GO:1902600; GO:0005887; GO:0000287; GO:0030955; GO:0006814;
allko_ids K15987;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Kangiellaceae;g__Kangiella;s__Kangiella spongicola;
genomedb_acc GCF_003194565.1;
genomedb_target db:genomedb|GCF_003194565.1|WP_110201183.1 1 667 evalue:1.3e-259 qcov:99.70 identity:71.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF03030;
pfam_desc Inorganic H+ pyrophosphatase;
pfam_id H_PPase;
pfam_target db:Pfam-A.hmm|PF03030.16 evalue:4.4e-239 score:794.7 best_domain_score:794.5 name:H_PPase;
sprot_desc K(+)-stimulated pyrophosphate-energized proton pump;
sprot_id sp|Q3AFC6|HPPA_CARHZ;
sprot_target db:uniprot_sprot|sp|Q3AFC6|HPPA_CARHZ 12 667 evalue:7.9e-147 qcov:98.10 identity:48.00;
tigrfam_acc TIGR01104;
tigrfam_desc V-type H(+)-translocating pyrophosphatase;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name V_PPase;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01104 evalue:1.7e-223 score:743.3 best_domain_score:742.7 name:TIGR01104;
tm_num 16;
62586 60577 transmembrane_helix
ID metaerg.pl|04191
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology o60586-60654i60739-60798o60811-60879i60940-61008o61051-61119i61258-61326o61354-61422i61441-61509o61537-61605i61666-61734o61747-61815i61942-62010o62053-62121i62257-62316o62329-62397i62527-62580o;
63096 63863 CDS
ID metaerg.pl|04192
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
63860 64642 CDS
ID metaerg.pl|04193
allec_ids 3.1.3.15;
allgo_ids GO:0046854; GO:0005829; GO:0005886; GO:0004401; GO:0008934; GO:0046872; GO:0042578; GO:0000105; GO:0010125;
allko_ids K05602;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669773.1 10 258 evalue:5.5e-65 qcov:95.80 identity:52.70;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id HISTSYN-PWY; PRPP-PWY;
metacyc_pathway_name L-histidine biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type HISTIDINE-SYN;; Super-Pathways;;
pfam_acc PF00459;
pfam_desc Inositol monophosphatase family;
pfam_id Inositol_P;
pfam_target db:Pfam-A.hmm|PF00459.25 evalue:1.7e-47 score:161.5 best_domain_score:161.3 name:Inositol_P;
sprot_desc Histidinol-phosphatase;
sprot_id sp|P95189|HISN_MYCTU;
sprot_target db:uniprot_sprot|sp|P95189|HISN_MYCTU 9 251 evalue:4.9e-44 qcov:93.50 identity:46.40;
64653 65618 CDS
ID metaerg.pl|04194
casgene_acc cd09637_cas4_CAS-I:CAS-II:CAS-V; COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B; pfam01930_cas4_CAS-I;
casgene_name cas4; cas4; cas4;
casgene_target db:casgenes.hmm|cd09637_cas4_CAS-I:CAS-II:CAS-V evalue:2.2e-14 score:53.3 best_domain_score:38.4 name:cas4; db:casgenes.hmm|COG1468_cas4_CAS-I-A:CAS-I-B:CAS-I-C:CAS-I-D:CAS-II-B evalue:1.4e-09 score:37.5 best_domain_score:34.4 name:cas4; db:casgenes.hmm|pfam01930_cas4_CAS-I evalue:1.2e-07 score:31.2 best_domain_score:22.8 name:cas4;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667504.1 13 317 evalue:1.7e-79 qcov:95.00 identity:50.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF01930; PF10926; PF12705;
pfam_desc Domain of unknown function DUF83; Protein of unknown function (DUF2800); PD-(D/E)XK nuclease superfamily;
pfam_id Cas_Cas4; DUF2800; PDDEXK_1;
pfam_target db:Pfam-A.hmm|PF01930.17 evalue:6.3e-07 score:28.9 best_domain_score:19.5 name:Cas_Cas4; db:Pfam-A.hmm|PF10926.8 evalue:1.7e-05 score:23.5 best_domain_score:23.5 name:DUF2800; db:Pfam-A.hmm|PF12705.7 evalue:1.3e-40 score:139.2 best_domain_score:138.9 name:PDDEXK_1;
65605 65934 CDS
ID metaerg.pl|04195
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667502.1 4 107 evalue:1.1e-14 qcov:95.40 identity:53.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
65936 66217 CDS
ID metaerg.pl|04196
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667501.1 1 93 evalue:4.1e-15 qcov:100.00 identity:52.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF09722;
pfam_desc Protein of unknown function (DUF2384);
pfam_id DUF2384;
pfam_target db:Pfam-A.hmm|PF09722.10 evalue:4e-06 score:26.0 best_domain_score:21.3 name:DUF2384;
66334 66636 CDS
ID metaerg.pl|04197
allgo_ids GO:0003676;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667500.1 1 100 evalue:4.9e-22 qcov:100.00 identity:60.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00313;
pfam_desc 'Cold-shock' DNA-binding domain;
pfam_id CSD;
pfam_target db:Pfam-A.hmm|PF00313.22 evalue:4.7e-06 score:25.6 best_domain_score:24.7 name:CSD;
66686 66973 CDS
ID metaerg.pl|04198
allgo_ids GO:0030163; GO:0006508;
allko_ids K06891;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Microterricola;s__Microterricola sp000799285;
genomedb_acc GCF_000799285.1;
genomedb_target db:genomedb|GCF_000799285.1|WP_052175724.1 3 94 evalue:4.2e-23 qcov:96.80 identity:63.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF02617;
pfam_desc ATP-dependent Clp protease adaptor protein ClpS;
pfam_id ClpS;
pfam_target db:Pfam-A.hmm|PF02617.17 evalue:5.6e-22 score:76.6 best_domain_score:76.3 name:ClpS;
sprot_desc ATP-dependent Clp protease adapter protein ClpS;
sprot_id sp|C1AVW7|CLPS_RHOOB;
sprot_target db:uniprot_sprot|sp|C1AVW7|CLPS_RHOOB 4 95 evalue:6.8e-20 qcov:96.80 identity:51.10;
66973 67473 CDS
ID metaerg.pl|04199
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinophytocola;s__Actinophytocola xanthii;
genomedb_acc GCF_001921205.1;
genomedb_target db:genomedb|GCF_001921205.1|WP_075125623.1 18 166 evalue:2.5e-07 qcov:89.80 identity:32.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF09438;
pfam_desc Domain of unknown function (DUF2017);
pfam_id DUF2017;
pfam_target db:Pfam-A.hmm|PF09438.10 evalue:2.1e-18 score:66.1 best_domain_score:61.2 name:DUF2017;
69178 67448 CDS
ID metaerg.pl|04200
allgo_ids GO:0005887; GO:0015648; GO:0071555; GO:0034204; GO:0015836; GO:0009252; GO:0008360;
allko_ids K03980;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667496.1 12 572 evalue:4.5e-120 qcov:97.40 identity:51.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF03023;
pfam_desc Lipid II flippase MurJ;
pfam_id MurJ;
pfam_target db:Pfam-A.hmm|PF03023.14 evalue:1.9e-77 score:260.0 best_domain_score:259.3 name:MurJ;
sprot_desc Probable lipid II flippase MurJ;
sprot_id sp|O34238|MURJ_VIBCH;
sprot_target db:uniprot_sprot|sp|O34238|MURJ_VIBCH 18 482 evalue:2.0e-21 qcov:80.70 identity:27.60;
tigrfam_acc TIGR01695;
tigrfam_desc murein biosynthesis integral membrane protein MurJ;
tigrfam_mainrole Cell envelope;
tigrfam_name murJ_mviN;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01695 evalue:2.6e-88 score:296.1 best_domain_score:296.1 name:TIGR01695;
tm_num 12;
69178 67448 transmembrane_helix
ID metaerg.pl|04201
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology i67748-67816o67883-67951i67970-68038o68081-68149i68243-68311o68324-68392i68453-68521o68549-68602i68663-68722o68813-68881i68939-69007o69035-69103i;
69254 70039 CDS
ID metaerg.pl|04202
allec_ids 2.3.2.6;
allgo_ids GO:0008914; GO:0030163; GO:0005737;
allko_ids K00684;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442224.1 45 258 evalue:6.1e-64 qcov:82.00 identity:59.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF03588;
pfam_desc Leucyl/phenylalanyl-tRNA protein transferase;
pfam_id Leu_Phe_trans;
pfam_target db:Pfam-A.hmm|PF03588.14 evalue:3.8e-64 score:214.5 best_domain_score:214.3 name:Leu_Phe_trans;
sprot_desc Leucyl/phenylalanyl-tRNA--protein transferase;
sprot_id sp|C6DF46|LFTR_PECCP;
sprot_target db:uniprot_sprot|sp|C6DF46|LFTR_PECCP 45 238 evalue:1.9e-48 qcov:74.30 identity:50.30;
tigrfam_acc TIGR00667;
tigrfam_desc leucyl/phenylalanyl-tRNA--protein transferase;
tigrfam_mainrole Protein fate;
tigrfam_name aat;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00667 evalue:2.6e-60 score:202.4 best_domain_score:202.1 name:TIGR00667;
70154 71476 CDS
ID metaerg.pl|04203
allec_ids 3.3.1.1;
allgo_ids GO:0051287; GO:0055114; GO:0005737; GO:0004013; GO:0006730;
allko_ids K01251;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669772.1 9 440 evalue:8.9e-209 qcov:98.20 identity:82.20;
kegg_pathway_id 00450; 00271;
kegg_pathway_name Selenoamino acid metabolism; Methionine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-5041; PWY-5328; METHIONINE-DEG1-PWY; PWY-6292;
metacyc_pathway_name S-adenosyl-L-methionine cycle II;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; superpathway of L-cysteine biosynthesis (mammalian);;
metacyc_pathway_type S-adenosyl-L-methionine-cycle;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; CYSTEINE-SYN; Super-Pathways;;
pfam_acc PF02826; PF05221; PF00670;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding domain;
pfam_id 2-Hacid_dh_C; AdoHcyase; AdoHcyase_NAD;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:2.8e-08 score:32.6 best_domain_score:31.7 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF05221.17 evalue:1.8e-132 score:440.3 best_domain_score:247.8 name:AdoHcyase; db:Pfam-A.hmm|PF00670.21 evalue:3.4e-77 score:257.3 best_domain_score:256.8 name:AdoHcyase_NAD;
sprot_desc Adenosylhomocysteinase;
sprot_id sp|A1WXM7|SAHH_HALHL;
sprot_target db:uniprot_sprot|sp|A1WXM7|SAHH_HALHL 14 440 evalue:2.5e-173 qcov:97.00 identity:69.10;
tigrfam_acc TIGR00936;
tigrfam_desc adenosylhomocysteinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name ahcY;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00936 evalue:5.6e-189 score:627.4 best_domain_score:627.2 name:TIGR00936;
71739 72761 CDS
ID metaerg.pl|04204
allgo_ids GO:0005886;
allko_ids K07335;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667492.1 1 340 evalue:7.6e-115 qcov:100.00 identity:57.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF02608;
pfam_desc ABC transporter substrate-binding protein PnrA-like;
pfam_id Bmp;
pfam_target db:Pfam-A.hmm|PF02608.14 evalue:3.6e-54 score:183.0 best_domain_score:182.2 name:Bmp;
sp YES;
sprot_desc Membrane lipoprotein TmpC;
sprot_id sp|P29724|TMPC_TREPA;
sprot_target db:uniprot_sprot|sp|P29724|TMPC_TREPA 16 336 evalue:3.3e-24 qcov:94.40 identity:28.70;
71739 71801 lipoprotein_signal_peptide
ID metaerg.pl|04205
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
72892 74421 CDS
ID metaerg.pl|04206
allec_ids 7.5.2.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015407;
allko_ids K02017; K02010; K02056; K05847; K01997; K02003; K02052; K02006; K11072; K02045; K06861; K02071; K01996; K10820; K10441; K05816; K02049; K10551; K01995; K01998; K10111; K10545; K10562; K10539; K02000; K10542; K01990; K02023;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667491.1 1 508 evalue:1.0e-195 qcov:99.80 identity:69.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.5e-07 score:30.1 best_domain_score:17.5 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:4.7e-47 score:159.2 best_domain_score:103.1 name:ABC_tran;
sprot_desc Glucose import ATP-binding protein TsgD13;
sprot_id sp|D4GPW3|TSGDD_HALVD;
sprot_target db:uniprot_sprot|sp|D4GPW3|TSGDD_HALVD 3 497 evalue:3.7e-128 qcov:97.20 identity:49.10;
74418 75662 CDS
ID metaerg.pl|04207
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886;
allko_ids K01995; K02057;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441713.1 30 414 evalue:4.9e-108 qcov:93.00 identity:60.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:1.3e-35 score:122.1 best_domain_score:122.1 name:BPD_transp_2;
sprot_desc Uncharacterized ABC transporter permease protein YufP;
sprot_id sp|O05254|YUFP_BACSU;
sprot_target db:uniprot_sprot|sp|O05254|YUFP_BACSU 71 395 evalue:6.1e-41 qcov:78.50 identity:39.00;
tm_num 10;
74418 75662 transmembrane_helix
ID metaerg.pl|04208
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology o74541-74609i74643-74711o74754-74822i74841-74909o74919-74978i75015-75083o75141-75209i75303-75371o75414-75482i75537-75605o;
75659 76915 CDS
ID metaerg.pl|04209
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886;
allko_ids K01995; K02057;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667490.1 2 418 evalue:2.3e-129 qcov:99.80 identity:61.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:1.4e-36 score:125.3 best_domain_score:125.3 name:BPD_transp_2;
sp YES;
sprot_desc Uncharacterized ABC transporter permease protein YufQ;
sprot_id sp|O05255|YUFQ_BACSU;
sprot_target db:uniprot_sprot|sp|O05255|YUFQ_BACSU 125 417 evalue:3.9e-51 qcov:70.10 identity:41.10;
tm_num 11;
75659 75775 signal_peptide
ID metaerg.pl|04210
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
75659 76915 transmembrane_helix
ID metaerg.pl|04211
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology i75719-75772o75830-75898i75932-76000o76010-76078i76097-76165o76175-76243i76262-76330o76415-76483i76580-76633o76676-76744i76805-76873o;
78142 76955 CDS
ID metaerg.pl|04212
allec_ids 2.6.1.1;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0004069;
allko_ids K10907; K00842; K00818; K00816; K14267; K01760; K00812; K00825; K14155; K14287; K00837; K00841; K14264;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669770.1 13 390 evalue:2.5e-146 qcov:95.70 identity:71.20;
kegg_pathway_id 00300; 00350; 00220; 00330; 00450; 00380; 00401; 00400; 00271; 00360; 00252; 00251; 00910; 00272; 00920; 00310; 00710;
kegg_pathway_name Lysine biosynthesis; Tyrosine metabolism; Urea cycle and metabolism of amino groups; Arginine and proline metabolism; Selenoamino acid metabolism; Tryptophan metabolism; Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Methionine metabolism; Phenylalanine metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Nitrogen metabolism; Cysteine metabolism; Sulfur metabolism; Lysine degradation; Carbon fixation in photosynthetic organisms;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id MALATE-ASPARTATE-SHUTTLE-PWY; THRESYN-PWY; PWY-6318; PWY0-781; ASPARTATESYN-PWY; PWY-5347; P4-PWY; PWY-3001; PWY-5345; ASPARTATE-DEG1-PWY; GLUTDEG-PWY; PWY-5328; PWY-5913; PWY-6146; ASPASN-PWY; CYSTEINE-DEG-PWY;
metacyc_pathway_name L-aspartate degradation II;; superpathway of L-threonine biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; aspartate superpathway;; L-aspartate biosynthesis;; superpathway of L-methionine biosynthesis (transsulfuration);; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-methionine biosynthesis (by sulfhydrylation);; L-aspartate degradation I;; L-glutamate degradation II;; superpathway of L-methionine salvage and degradation;; partial TCA cycle (obligate autotrophs);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of L-aspartate and L-asparagine biosynthesis;; L-cysteine degradation I;;
metacyc_pathway_type ASPARTATE-DEG;; Super-Pathways; THREONINE-BIOSYNTHESIS;; PHENYLALANINE-DEG;; Super-Pathways;; ASPARTATE-SYN;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; ASPARTATE-DEG;; ASPARTATE-SYN; GLUTAMATE-DEG;; METHIONINE-DEG; Super-Pathways;; TCA-VARIANTS;; Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Metabolic-Clusters; Super-Pathways;; CYSTEINE-DEG;;
pfam_acc PF00155; PF01041;
pfam_desc Aminotransferase class I and II; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1.8e-71 score:240.4 best_domain_score:240.3 name:Aminotran_1_2; db:Pfam-A.hmm|PF01041.17 evalue:2.9e-10 score:39.2 best_domain_score:38.6 name:DegT_DnrJ_EryC1;
sprot_desc Aspartate aminotransferase;
sprot_id sp|Q60013|AAT_STRVG;
sprot_target db:uniprot_sprot|sp|Q60013|AAT_STRVG 3 394 evalue:5.5e-124 qcov:99.20 identity:57.50;
78266 79378 CDS
ID metaerg.pl|04213
allec_ids 2.6.1.52;
allgo_ids GO:0005737; GO:0004648; GO:0030170; GO:0006564; GO:0008615;
allko_ids K00831;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667489.1 4 369 evalue:9.0e-138 qcov:98.90 identity:67.60;
kegg_pathway_id 00750; 00260;
kegg_pathway_name Vitamin B6 metabolism; Glycine, serine and threonine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id SULFATE-CYS-PWY; PYRIDOXSYN-PWY; SER-GLYSYN-PWY; SERSYN-PWY; PWY0-845;
metacyc_pathway_name superpathway of sulfate assimilation and cysteine biosynthesis;; pyridoxal 5'-phosphate biosynthesis I;; superpathway of L-serine and glycine biosynthesis I;; L-serine biosynthesis I;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;;
metacyc_pathway_type Sulfur-Metabolism; Super-Pathways;; Vitamin-B6-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; SERINE-BIOSYNTHESIS;; Super-Pathways; Vitamin-B6-Biosynthesis;;
pfam_acc PF00266;
pfam_desc Aminotransferase class-V;
pfam_id Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:1.3e-20 score:72.9 best_domain_score:65.3 name:Aminotran_5;
sprot_desc Phosphoserine aminotransferase;
sprot_id sp|A1SEM0|SERC_NOCSJ;
sprot_target db:uniprot_sprot|sp|A1SEM0|SERC_NOCSJ 4 369 evalue:5.2e-116 qcov:98.90 identity:57.50;
tigrfam_acc TIGR01366;
tigrfam_desc putative phosphoserine aminotransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name serC_3;
tigrfam_sub1role Serine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01366 evalue:4.7e-150 score:498.9 best_domain_score:498.7 name:TIGR01366;
80341 79442 CDS
ID metaerg.pl|04214
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667485.1 1 298 evalue:9.7e-90 qcov:99.70 identity:54.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF09754;
pfam_desc PAC2 family;
pfam_id PAC2;
pfam_target db:Pfam-A.hmm|PF09754.9 evalue:8.3e-43 score:146.1 best_domain_score:145.2 name:PAC2;
80911 80492 CDS
ID metaerg.pl|04215
genomedb_OC d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__GCA-2699025;s__GCA-2699025 sp002699025;
genomedb_acc GCA_002699025.1;
genomedb_target db:genomedb|GCA_002699025.1|MAT28340.1 14 139 evalue:2.1e-10 qcov:90.60 identity:64.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
81748 81960 CDS
ID metaerg.pl|04216
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667482.1 2 69 evalue:3.0e-18 qcov:97.10 identity:61.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
81957 82421 CDS
ID metaerg.pl|04217
allec_ids 3.1.26.4;
allgo_ids GO:0003676; GO:0004523; GO:0005737; GO:0000287; GO:0006401;
allko_ids K03469;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669768.1 8 154 evalue:2.2e-53 qcov:95.50 identity:68.70;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00075;
pfam_desc RNase H;
pfam_id RNase_H;
pfam_target db:Pfam-A.hmm|PF00075.24 evalue:1.9e-28 score:98.6 best_domain_score:98.4 name:RNase_H;
sprot_desc Ribonuclease H;
sprot_id sp|A4G7G3|RNH_HERAR;
sprot_target db:uniprot_sprot|sp|A4G7G3|RNH_HERAR 16 149 evalue:8.4e-28 qcov:87.00 identity:47.40;
82789 82466 CDS
ID metaerg.pl|04218
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669767.1 14 106 evalue:6.0e-10 qcov:86.90 identity:51.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF05437;
pfam_desc Branched-chain amino acid transport protein (AzlD);
pfam_id AzlD;
pfam_target db:Pfam-A.hmm|PF05437.12 evalue:3.1e-08 score:32.9 best_domain_score:32.7 name:AzlD;
tm_num 3;
82789 82466 transmembrane_helix
ID metaerg.pl|04219
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology i82484-82537o82580-82639i82676-82744o;
83481 82786 CDS
ID metaerg.pl|04220
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441711.1 1 226 evalue:1.1e-37 qcov:97.80 identity:47.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF03591;
pfam_desc AzlC protein;
pfam_id AzlC;
pfam_target db:Pfam-A.hmm|PF03591.14 evalue:1.7e-29 score:102.2 best_domain_score:101.5 name:AzlC;
tm_num 6;
83481 82786 transmembrane_helix
ID metaerg.pl|04221
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology o82843-82911i82930-82998o83011-83079i83197-83253o83281-83340i83377-83445o;
84331 83678 CDS
ID metaerg.pl|04222
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667450.1 4 166 evalue:7.1e-26 qcov:75.10 identity:41.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
85325 84363 CDS
ID metaerg.pl|04223
allgo_ids GO:0022857; GO:0043190; GO:0055085;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA11373;g__UBA11373;s__UBA11373 sp003486285;
genomedb_acc GCA_003486285.1;
genomedb_target db:genomedb|GCA_003486285.1|HAX81332.1 20 319 evalue:9.5e-43 qcov:93.80 identity:38.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF04069;
pfam_desc Substrate binding domain of ABC-type glycine betaine transport system;
pfam_id OpuAC;
pfam_target db:Pfam-A.hmm|PF04069.12 evalue:7e-25 score:87.3 best_domain_score:87.0 name:OpuAC;
sp YES;
84363 84482 lipoprotein_signal_peptide
ID metaerg.pl|04224
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
86384 85482 CDS
ID metaerg.pl|04225
allgo_ids GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__SM23-28-2;g__SM23-28-2;s__SM23-28-2 sp001303545;
genomedb_acc GCA_001303545.1;
genomedb_target db:genomedb|GCA_001303545.1|KPK48039.1 18 235 evalue:2.0e-39 qcov:72.70 identity:43.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:3.9e-21 score:74.8 best_domain_score:74.7 name:BPD_transp_1;
tm_num 4;
86384 85482 transmembrane_helix
ID metaerg.pl|04226
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology o85596-85664i85683-85751o85779-85847i86079-86147o;
87067 86381 CDS
ID metaerg.pl|04227
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0031460;
allko_ids K05846;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Microtrichaceae;g__Microthrix;s__Microthrix parvicella;
genomedb_acc GCF_000299415.1;
genomedb_target db:genomedb|GCF_000299415.1|WP_012227206.1 6 223 evalue:8.2e-49 qcov:95.60 identity:55.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:5.3e-17 score:61.4 best_domain_score:61.2 name:BPD_transp_1;
sprot_desc Osmoprotectant import permease protein OsmW;
sprot_id sp|Q8ZPK3|OSMW_SALTY;
sprot_target db:uniprot_sprot|sp|Q8ZPK3|OSMW_SALTY 12 200 evalue:3.6e-19 qcov:82.90 identity:33.80;
tm_num 5;
87067 86381 transmembrane_helix
ID metaerg.pl|04228
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology o86462-86530i86549-86617o86645-86698i86804-86872o86930-86998i;
88191 87064 CDS
ID metaerg.pl|04229
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0031460;
allko_ids K02045; K11072; K02068; K10199; K01996; K06861; K02071; K02017; K02032; K11084; K02052; K02006; K02003; K01997; K05847; K02010; K02000; K11962; K02023; K01990; K10243; K11076; K05816; K10235; K01697; K02031; K01998; K10111; K10112; K01995; K02065; K02049;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__UBA4738;o__UBA4738;f__UBA4738;g__UBA5182;s__UBA5182 sp002413185;
genomedb_acc GCA_002413185.1;
genomedb_target db:genomedb|GCA_002413185.1|DHWM01000087.1_5 11 366 evalue:8.4e-107 qcov:94.90 identity:55.50;
kegg_pathway_id 00271; 00450; 02010; 00260;
kegg_pathway_name Methionine metabolism; Selenoamino acid metabolism; ABC transporters - General; Glycine, serine and threonine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6135; PWY-6171; PWY-6188; PWY-6166;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF13304; PF00005; PF00571;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; CBS domain;
pfam_id AAA_21; ABC_tran; CBS;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:4.5e-07 score:29.2 best_domain_score:15.5 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:4e-33 score:114.1 best_domain_score:113.5 name:ABC_tran; db:Pfam-A.hmm|PF00571.28 evalue:6.6e-11 score:41.7 best_domain_score:27.7 name:CBS;
sprot_desc Osmoprotectant import ATP-binding protein OsmV;
sprot_id sp|Q8ZPK4|OSMV_SALTY;
sprot_target db:uniprot_sprot|sp|Q8ZPK4|OSMV_SALTY 11 371 evalue:1.8e-76 qcov:96.30 identity:42.00;
88816 88292 CDS
ID metaerg.pl|04230
allgo_ids GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667436.1 10 158 evalue:1.1e-45 qcov:85.60 identity:62.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF13411;
pfam_desc MerR HTH family regulatory protein;
pfam_id MerR_1;
pfam_target db:Pfam-A.hmm|PF13411.6 evalue:6.4e-17 score:60.7 best_domain_score:60.1 name:MerR_1;
sprot_desc Uncharacterized HTH-type transcriptional regulator MT1879;
sprot_id sp|P9WME4|Y1830_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WME4|Y1830_MYCTO 19 151 evalue:6.8e-34 qcov:76.40 identity:53.70;
89588 89079 CDS
ID metaerg.pl|04231
allgo_ids GO:0004518;
allko_ids K08999;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667435.1 1 166 evalue:8.8e-40 qcov:98.20 identity:54.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF02577;
pfam_desc Bifunctional nuclease;
pfam_id DNase-RNase;
pfam_target db:Pfam-A.hmm|PF02577.14 evalue:9.4e-40 score:134.5 best_domain_score:134.3 name:DNase-RNase;
sprot_desc hypothetical protein;
sprot_id sp|P9WLR4|Y1829_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WLR4|Y1829_MYCTO 4 166 evalue:4.3e-33 qcov:96.40 identity:45.40;
90743 89640 CDS
ID metaerg.pl|04232
allgo_ids GO:0006508; GO:0009002;
allko_ids K07258; K01286;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667434.1 36 358 evalue:4.4e-44 qcov:88.00 identity:41.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00768; PF02113;
pfam_desc D-alanyl-D-alanine carboxypeptidase; D-Ala-D-Ala carboxypeptidase 3 (S13) family;
pfam_id Peptidase_S11; Peptidase_S13;
pfam_target db:Pfam-A.hmm|PF00768.20 evalue:1.2e-39 score:135.5 best_domain_score:135.1 name:Peptidase_S11; db:Pfam-A.hmm|PF02113.15 evalue:8.5e-08 score:30.6 best_domain_score:22.4 name:Peptidase_S13;
91606 90899 CDS
ID metaerg.pl|04233
allgo_ids GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667433.1 6 234 evalue:1.9e-56 qcov:97.40 identity:53.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00376; PF13411;
pfam_desc MerR family regulatory protein; MerR HTH family regulatory protein;
pfam_id MerR; MerR_1;
pfam_target db:Pfam-A.hmm|PF00376.23 evalue:1e-10 score:40.4 best_domain_score:38.6 name:MerR; db:Pfam-A.hmm|PF13411.6 evalue:1.3e-09 score:37.3 best_domain_score:36.0 name:MerR_1;
sprot_desc Uncharacterized HTH-type transcriptional regulator MT1876;
sprot_id sp|P9WME6|Y1828_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WME6|Y1828_MYCTO 5 233 evalue:5.0e-32 qcov:97.40 identity:39.20;
92024 91596 CDS
ID metaerg.pl|04234
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669762.1 12 134 evalue:3.7e-23 qcov:86.60 identity:48.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00498; PF16697;
pfam_desc FHA domain; Inner membrane component of T3SS, cytoplasmic domain;
pfam_id FHA; Yop-YscD_cpl;
pfam_target db:Pfam-A.hmm|PF00498.26 evalue:7.4e-17 score:60.7 best_domain_score:60.3 name:FHA; db:Pfam-A.hmm|PF16697.5 evalue:5.8e-16 score:57.8 best_domain_score:57.5 name:Yop-YscD_cpl;
sprot_desc Glycogen accumulation regulator GarA;
sprot_id sp|P9WJA8|GARA_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WJA8|GARA_MYCTO 3 137 evalue:8.3e-22 qcov:95.10 identity:44.80;
92652 92050 CDS
ID metaerg.pl|04235
allec_ids 2.7.8.5;
allgo_ids GO:0008654; GO:0016020; GO:0016780; GO:0016021; GO:0005886; GO:0008444; GO:0006655;
allko_ids K00998; K08744;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441695.1 1 191 evalue:2.5e-33 qcov:95.50 identity:44.80;
kegg_pathway_id 00260; 00564;
kegg_pathway_name Glycine, serine and threonine metabolism; Glycerophospholipid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PHOSLIPSYN2-PWY; PWY-5668; PWY4FS-8; PHOSLIPSYN-PWY; PWY-5269; PWY4FS-7;
metacyc_pathway_name superpathway of phospholipid biosynthesis II (plants);; cardiolipin biosynthesis I;; phosphatidylglycerol biosynthesis II (non-plastidic);; superpathway of phospholipid biosynthesis I (bacteria);; cardiolipin biosynthesis II;; phosphatidylglycerol biosynthesis I (plastidic);;
metacyc_pathway_type Phospholipid-Biosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;;
pfam_acc PF01066;
pfam_desc CDP-alcohol phosphatidyltransferase;
pfam_id CDP-OH_P_transf;
pfam_target db:Pfam-A.hmm|PF01066.21 evalue:7.7e-11 score:41.8 best_domain_score:41.8 name:CDP-OH_P_transf;
sprot_desc Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 1;
sprot_id sp|P9WPG4|PGSA1_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WPG4|PGSA1_MYCTO 12 195 evalue:6.7e-17 qcov:92.00 identity:35.80;
tm_num 6;
92652 92050 transmembrane_helix
ID metaerg.pl|04236
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
topology i92107-92166o92194-92247i92308-92376o92386-92439i92458-92526o92569-92637i;
92742 92667 tRNA
ID metaerg.pl|04237
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
name tRNA_Pro_ggg;
95012 92886 CDS
ID metaerg.pl|04238
allec_ids 2.7.4.14;
allgo_ids GO:0005524;
allko_ids K00945; K13799; K00955; K00956; K00860; K01918;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667429.1 27 703 evalue:6.4e-201 qcov:95.60 identity:55.70;
kegg_pathway_id 00770; 00410; 00240; 00230; 00450; 00920;
kegg_pathway_name Pantothenate and CoA biosynthesis; beta-Alanine metabolism; Pyrimidine metabolism; Purine metabolism; Selenoamino acid metabolism; Sulfur metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PRPP-PWY; P1-PWY; PWY0-163; PWY0-162; PWY-5687;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; ; ; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; ;
metacyc_pathway_type Super-Pathways;; ; ; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ;
pfam_acc PF00004; PF13191; PF13238; PF13401; PF13521; PF13671; PF00005; PF04548; PF00025; PF02492; PF02224; PF13189; PF00350; PF02421; PF00009; PF14714; PF03308; PF01926; PF03266; PF00071; PF00910; PF08477; PF03193; PF05496; PF09439; PF05621;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA ATPase domain; AAA domain; AAA domain; AAA domain; AAA domain; ABC transporter; AIG1 family; ADP-ribosylation factor family; CobW/HypB/UreG, nucleotide-binding domain; Cytidylate kinase; Cytidylate kinase-like family; Dynamin family; Ferrous iron transport protein B; Elongation factor Tu GTP binding domain; KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; Methylmalonyl Co-A mutase-associated GTPase MeaB; 50S ribosome-binding GTPase; NTPase; Ras family; RNA helicase; Ras of Complex, Roc, domain of DAPkinase; RsgA GTPase; Holliday junction DNA helicase RuvB P-loop domain; Signal recognition particle receptor beta subunit; Bacterial TniB protein;
pfam_id AAA; AAA_16; AAA_18; AAA_22; AAA_28; AAA_33; ABC_tran; AIG1; Arf; cobW; Cytidylate_kin; Cytidylate_kin2; Dynamin_N; FeoB_N; GTP_EFTU; KH_dom-like; MeaB; MMR_HSR1; NTPase_1; Ras; RNA_helicase; Roc; RsgA_GTPase; RuvB_N; SRPRB; TniB;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:3.8e-05 score:23.3 best_domain_score:10.5 name:AAA; db:Pfam-A.hmm|PF13191.6 evalue:5.3e-09 score:35.9 best_domain_score:16.4 name:AAA_16; db:Pfam-A.hmm|PF13238.6 evalue:3.2e-09 score:36.7 best_domain_score:18.8 name:AAA_18; db:Pfam-A.hmm|PF13401.6 evalue:8.2e-09 score:35.1 best_domain_score:15.1 name:AAA_22; db:Pfam-A.hmm|PF13521.6 evalue:1.2e-06 score:28.1 best_domain_score:12.1 name:AAA_28; db:Pfam-A.hmm|PF13671.6 evalue:9.6e-08 score:31.5 best_domain_score:14.1 name:AAA_33; db:Pfam-A.hmm|PF00005.27 evalue:4e-08 score:33.1 best_domain_score:10.0 name:ABC_tran; db:Pfam-A.hmm|PF04548.16 evalue:1.5e-16 score:59.7 best_domain_score:31.1 name:AIG1; db:Pfam-A.hmm|PF00025.21 evalue:6.9e-06 score:24.9 best_domain_score:11.2 name:Arf; db:Pfam-A.hmm|PF02492.19 evalue:5.2e-07 score:28.7 best_domain_score:13.6 name:cobW; db:Pfam-A.hmm|PF02224.18 evalue:3e-63 score:212.6 best_domain_score:211.5 name:Cytidylate_kin; db:Pfam-A.hmm|PF13189.6 evalue:2.7e-08 score:33.4 best_domain_score:31.3 name:Cytidylate_kin2; db:Pfam-A.hmm|PF00350.23 evalue:3.3e-15 score:55.8 best_domain_score:15.1 name:Dynamin_N; db:Pfam-A.hmm|PF02421.18 evalue:3.4e-27 score:94.1 best_domain_score:47.3 name:FeoB_N; db:Pfam-A.hmm|PF00009.27 evalue:3.6e-17 score:61.8 best_domain_score:26.1 name:GTP_EFTU; db:Pfam-A.hmm|PF14714.6 evalue:3.3e-23 score:81.0 best_domain_score:76.1 name:KH_dom-like; db:Pfam-A.hmm|PF03308.16 evalue:2.9e-07 score:29.0 best_domain_score:12.3 name:MeaB; db:Pfam-A.hmm|PF01926.23 evalue:3e-51 score:171.5 best_domain_score:87.4 name:MMR_HSR1; db:Pfam-A.hmm|PF03266.15 evalue:5.7e-06 score:25.6 best_domain_score:10.2 name:NTPase_1; db:Pfam-A.hmm|PF00071.22 evalue:7.9e-07 score:28.0 best_domain_score:13.6 name:Ras; db:Pfam-A.hmm|PF00910.22 evalue:2e-06 score:27.4 best_domain_score:9.7 name:RNA_helicase; db:Pfam-A.hmm|PF08477.13 evalue:2.3e-08 score:33.5 best_domain_score:15.2 name:Roc; db:Pfam-A.hmm|PF03193.16 evalue:7.1e-13 score:48.0 best_domain_score:15.0 name:RsgA_GTPase; db:Pfam-A.hmm|PF05496.12 evalue:7.6e-05 score:21.7 best_domain_score:8.8 name:RuvB_N; db:Pfam-A.hmm|PF09439.10 evalue:1.1e-06 score:27.4 best_domain_score:11.2 name:SRPRB; db:Pfam-A.hmm|PF05621.11 evalue:5.1e-06 score:25.3 best_domain_score:13.7 name:TniB;
tigrfam_acc TIGR00017; TIGR00231; TIGR00436; TIGR03594;
tigrfam_desc cytidylate kinase; small GTP-binding protein domain; GTP-binding protein Era; ribosome-associated GTPase EngA;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides; Unknown function; Protein synthesis; Protein synthesis;
tigrfam_name cmk; small_GTP; era; GTPase_EngA;
tigrfam_sub1role Nucleotide and nucleoside interconversions; General; Other; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00017 evalue:9.9e-61 score:204.3 best_domain_score:203.1 name:TIGR00017; db:TIGRFAMs.hmm|TIGR00231 evalue:2.3e-50 score:169.8 best_domain_score:85.5 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00436 evalue:3.8e-44 score:150.2 best_domain_score:77.6 name:TIGR00436; db:TIGRFAMs.hmm|TIGR03594 evalue:1.7e-142 score:474.6 best_domain_score:474.1 name:TIGR03594;
96390 95005 CDS
ID metaerg.pl|04239
allec_ids 2.5.1.19;
allgo_ids GO:0016765; GO:0005737; GO:0003866; GO:0009073; GO:0009423;
allko_ids K04517; K00800; K00891; K01735; K00014; K00945; K03785; K00210; K13830;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667428.1 1 459 evalue:1.1e-127 qcov:99.60 identity:57.90;
kegg_pathway_id 00400; 00401; 00240;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Novobiocin biosynthesis; Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id ALL-CHORISMATE-PWY; PWY-6163; COMPLETE-ARO-PWY; ARO-PWY; PWY-6165;
metacyc_pathway_name superpathway of chorismate metabolism;; chorismate biosynthesis from 3-dehydroquinate;; superpathway of aromatic amino acid biosynthesis;; chorismate biosynthesis I;; chorismate biosynthesis II (archaea);;
metacyc_pathway_type Super-Pathways;; Chorismate-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;;
pfam_acc PF00275;
pfam_desc EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase);
pfam_id EPSP_synthase;
pfam_target db:Pfam-A.hmm|PF00275.20 evalue:4.7e-83 score:278.4 best_domain_score:278.1 name:EPSP_synthase;
sprot_desc 3-phosphoshikimate 1-carboxyvinyltransferase;
sprot_id sp|A5UZF9|AROA_ROSS1;
sprot_target db:uniprot_sprot|sp|A5UZF9|AROA_ROSS1 13 455 evalue:1.3e-71 qcov:96.10 identity:40.40;
tigrfam_acc TIGR01356;
tigrfam_desc 3-phosphoshikimate 1-carboxyvinyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name aroA;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01356 evalue:2.9e-93 score:312.1 best_domain_score:311.9 name:TIGR01356;
97544 96387 CDS
ID metaerg.pl|04240
allec_ids 1.3.1.12;
allgo_ids GO:0050661; GO:0008977; GO:0004665; GO:0006571;
allko_ids K00210; K00928; K13830; K00951; K12524; K04092; K04093; K00891; K01735; K00014; K14170; K14187; K03785; K00945; K04518; K12526; K04517; K01713; K00800;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441694.1 1 366 evalue:3.4e-79 qcov:95.10 identity:53.80;
kegg_pathway_id 00300; 00240; 00260; 00401; 00230; 00400;
kegg_pathway_name Lysine biosynthesis; Pyrimidine metabolism; Glycine, serine and threonine metabolism; Novobiocin biosynthesis; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; TYRSYN;
metacyc_pathway_name superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; L-tyrosine biosynthesis I;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; TYROSINE-SYN;;
pfam_acc PF03807; PF03446; PF01210; PF02153;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; NAD binding domain of 6-phosphogluconate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; Prephenate dehydrogenase;
pfam_id F420_oxidored; NAD_binding_2; NAD_Gly3P_dh_N; PDH;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:4.9e-08 score:32.7 best_domain_score:32.7 name:F420_oxidored; db:Pfam-A.hmm|PF03446.15 evalue:8e-06 score:25.3 best_domain_score:23.5 name:NAD_binding_2; db:Pfam-A.hmm|PF01210.23 evalue:1.1e-05 score:24.6 best_domain_score:21.0 name:NAD_Gly3P_dh_N; db:Pfam-A.hmm|PF02153.17 evalue:2.6e-55 score:186.4 best_domain_score:186.2 name:PDH;
sp YES;
sprot_desc Prephenate dehydrogenase;
sprot_id sp|Q49XG5|TYRA_STAS1;
sprot_target db:uniprot_sprot|sp|Q49XG5|TYRA_STAS1 9 369 evalue:8.3e-24 qcov:93.80 identity:28.80;
96387 96491 signal_peptide
ID metaerg.pl|04241
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
97930 97550 CDS
ID metaerg.pl|04242
allec_ids 5.4.99.5;
allgo_ids GO:0005737; GO:0004106; GO:0009073; GO:0046417;
allko_ids K06208;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669761.1 8 126 evalue:2.6e-36 qcov:94.40 identity:65.50;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-3461; PWY-6120; PHESYN; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY; PWY-3481; PWY-3462; TYRSYN;
metacyc_pathway_name L-tyrosine biosynthesis II;; L-tyrosine biosynthesis III;; L-phenylalanine biosynthesis I;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; L-phenylalanine biosynthesis II;; L-tyrosine biosynthesis I;;
metacyc_pathway_type TYROSINE-SYN;; TYROSINE-SYN;; PHENYLALANINE-SYN;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; PHENYLALANINE-SYN;; TYROSINE-SYN;;
pfam_acc PF07736;
pfam_desc Chorismate mutase type I;
pfam_id CM_1;
pfam_target db:Pfam-A.hmm|PF07736.11 evalue:7.3e-44 score:148.2 best_domain_score:148.0 name:CM_1;
sprot_desc Chorismate mutase AroH;
sprot_id sp|P19080|AROH_BACSU;
sprot_target db:uniprot_sprot|sp|P19080|AROH_BACSU 9 124 evalue:9.6e-22 qcov:92.10 identity:42.70;
tigrfam_acc TIGR01796;
tigrfam_desc chorismate mutase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name CM_mono_aroH;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01796 evalue:3.3e-40 score:136.3 best_domain_score:136.2 name:TIGR01796;
98703 97927 CDS
ID metaerg.pl|04243
allec_ids 5.4.99.-;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441693.1 3 233 evalue:2.0e-83 qcov:89.50 identity:69.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-6008; PWY-5672; PWY-5992; PWY-6109; PWY-5203; PWY-112; RIBOKIN-PWY; PWY-6005; PWY-5377; PWY-6115;
metacyc_pathway_name baruol biosynthesis;; ginsenosides biosynthesis;; thalianol and derivatives biosynthesis;; mangrove triterpenoid biosynthesis;; soybean saponin I biosynthesis;; lupeol biosynthesis;; ribose phosphorylation;; marneral biosynthesis;; α-amyrin biosynthesis;; ;
metacyc_pathway_type TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; Sugars-And-Polysaccharides-Degradation;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; ;
pfam_acc PF00849; PF01479;
pfam_desc RNA pseudouridylate synthase; S4 domain;
pfam_id PseudoU_synth_2; S4;
pfam_target db:Pfam-A.hmm|PF00849.22 evalue:5.4e-21 score:74.6 best_domain_score:73.8 name:PseudoU_synth_2; db:Pfam-A.hmm|PF01479.25 evalue:4.7e-12 score:44.7 best_domain_score:44.7 name:S4;
sprot_desc Uncharacterized RNA pseudouridine synthase ML1370;
sprot_id sp|O05668|Y1370_MYCLE;
sprot_target db:uniprot_sprot|sp|O05668|Y1370_MYCLE 2 237 evalue:6.5e-57 qcov:91.50 identity:52.70;
tigrfam_acc TIGR00093;
tigrfam_desc pseudouridine synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00093;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00093 evalue:1.6e-52 score:176.6 best_domain_score:176.2 name:TIGR00093;
99775 98696 CDS
ID metaerg.pl|04244
allgo_ids GO:0051304;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667426.1 1 358 evalue:1.5e-57 qcov:99.70 identity:42.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF04079;
pfam_desc Segregation and condensation complex subunit ScpB;
pfam_id SMC_ScpB;
pfam_target db:Pfam-A.hmm|PF04079.16 evalue:9.8e-47 score:157.8 best_domain_score:157.3 name:SMC_ScpB;
tigrfam_acc TIGR00281;
tigrfam_desc segregation and condensation protein B;
tigrfam_mainrole DNA metabolism;
tigrfam_name TIGR00281;
tigrfam_sub1role Chromosome-associated proteins;
tigrfam_target db:TIGRFAMs.hmm|TIGR00281 evalue:3.2e-34 score:117.3 best_domain_score:116.8 name:TIGR00281;
100635 99787 CDS
ID metaerg.pl|04245
allgo_ids GO:0005737; GO:0007049; GO:0051301; GO:0007059; GO:0006260;
allko_ids K05896;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667425.1 1 274 evalue:9.5e-63 qcov:97.20 identity:53.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF02616;
pfam_desc Segregation and condensation protein ScpA;
pfam_id SMC_ScpA;
pfam_target db:Pfam-A.hmm|PF02616.14 evalue:2.6e-27 score:95.5 best_domain_score:94.2 name:SMC_ScpA;
sprot_desc Segregation and condensation protein A;
sprot_id sp|C0ZC76|SCPA_BREBN;
sprot_target db:uniprot_sprot|sp|C0ZC76|SCPA_BREBN 1 219 evalue:2.2e-18 qcov:77.70 identity:32.00;
102084 100744 CDS
ID metaerg.pl|04246
allec_ids 2.4.2.2;
allgo_ids GO:0016757; GO:0046872; GO:0004645; GO:0016154; GO:0009032; GO:0006206; GO:0006213;
allko_ids K00756; K00758; K00766; K13497;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667422.1 8 442 evalue:9.5e-142 qcov:97.50 identity:64.90;
kegg_pathway_id 02020; 00983; 00230; 00400; 00240;
kegg_pathway_name Two-component system - General; Drug metabolism - other enzymes; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00591; PF02885; PF07831;
pfam_desc Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; Pyrimidine nucleoside phosphorylase C-terminal domain;
pfam_id Glycos_transf_3; Glycos_trans_3N; PYNP_C;
pfam_target db:Pfam-A.hmm|PF00591.21 evalue:1.5e-31 score:109.1 best_domain_score:108.4 name:Glycos_transf_3; db:Pfam-A.hmm|PF02885.17 evalue:9e-16 score:56.7 best_domain_score:56.3 name:Glycos_trans_3N; db:Pfam-A.hmm|PF07831.13 evalue:6.2e-15 score:53.9 best_domain_score:52.3 name:PYNP_C;
sprot_desc Pyrimidine-nucleoside phosphorylase;
sprot_id sp|P77836|PDP_GEOSE;
sprot_target db:uniprot_sprot|sp|P77836|PDP_GEOSE 10 391 evalue:8.0e-87 qcov:85.70 identity:49.90;
tigrfam_acc TIGR02644;
tigrfam_desc pyrimidine-nucleoside phosphorylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name Y_phosphoryl;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02644 evalue:6.1e-136 score:452.7 best_domain_score:452.3 name:TIGR02644;
103165 102236 CDS
ID metaerg.pl|04247
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0005737; GO:0009037; GO:0007049; GO:0051301; GO:0007059; GO:0006313;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669760.1 13 309 evalue:1.3e-94 qcov:96.10 identity:62.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00589; PF02899;
pfam_desc Phage integrase family; Phage integrase, N-terminal SAM-like domain;
pfam_id Phage_integrase; Phage_int_SAM_1;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:3.6e-41 score:140.0 best_domain_score:139.5 name:Phage_integrase; db:Pfam-A.hmm|PF02899.17 evalue:2.3e-18 score:65.5 best_domain_score:65.1 name:Phage_int_SAM_1;
sprot_desc Tyrosine recombinase XerD;
sprot_id sp|P67637|XERD_MYCBO;
sprot_target db:uniprot_sprot|sp|P67637|XERD_MYCBO 14 309 evalue:3.0e-77 qcov:95.80 identity:52.50;
103778 103152 CDS
ID metaerg.pl|04248
allgo_ids GO:0016787;
allko_ids K03574; K01515;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108665682.1 4 180 evalue:8.1e-35 qcov:85.10 identity:46.90;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:2.2e-16 score:59.3 best_domain_score:58.8 name:NUDIX;
105478 103775 CDS
ID metaerg.pl|04249
allec_ids 6.3.4.2;
allgo_ids GO:0003883; GO:0006221; GO:0005524; GO:0046872; GO:0044210; GO:0006541;
allko_ids K01937;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669759.1 11 546 evalue:7.1e-227 qcov:94.50 identity:71.70;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY0-162; PWY-5687; PRPP-PWY;
metacyc_pathway_name superpathway of pyrimidine ribonucleotides de novo biosynthesis;; ; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ; Super-Pathways;;
pfam_acc PF06418; PF00117;
pfam_desc CTP synthase N-terminus; Glutamine amidotransferase class-I;
pfam_id CTP_synth_N; GATase;
pfam_target db:Pfam-A.hmm|PF06418.14 evalue:1.3e-119 score:397.6 best_domain_score:397.2 name:CTP_synth_N; db:Pfam-A.hmm|PF00117.28 evalue:1.5e-51 score:174.1 best_domain_score:173.4 name:GATase;
sprot_desc CTP synthase;
sprot_id sp|A0LUA5|PYRG_ACIC1;
sprot_target db:uniprot_sprot|sp|A0LUA5|PYRG_ACIC1 9 535 evalue:1.6e-204 qcov:92.90 identity:64.60;
tigrfam_acc TIGR00337;
tigrfam_desc CTP synthase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name PyrG;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00337 evalue:1.6e-237 score:788.4 best_domain_score:788.1 name:TIGR00337;
107407 105638 CDS
ID metaerg.pl|04250
allgo_ids GO:0005524; GO:0000724; GO:0009314; GO:0009432;
allko_ids K03631;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441692.1 1 568 evalue:8.4e-130 qcov:96.40 identity:52.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF13476; PF02463;
pfam_desc AAA domain; RecF/RecN/SMC N terminal domain;
pfam_id AAA_23; SMC_N;
pfam_target db:Pfam-A.hmm|PF13476.6 evalue:2.4e-09 score:37.2 best_domain_score:35.5 name:AAA_23; db:Pfam-A.hmm|PF02463.19 evalue:9.2e-12 score:44.1 best_domain_score:42.4 name:SMC_N;
sprot_desc DNA repair protein RecN;
sprot_id sp|Q9S220|RECN_STRCO;
sprot_target db:uniprot_sprot|sp|Q9S220|RECN_STRCO 5 571 evalue:1.2e-61 qcov:96.30 identity:41.50;
tigrfam_acc TIGR00634;
tigrfam_desc DNA repair protein RecN;
tigrfam_mainrole DNA metabolism;
tigrfam_name recN;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00634 evalue:1.6e-139 score:465.6 best_domain_score:465.4 name:TIGR00634;
108457 107570 CDS
ID metaerg.pl|04251
allec_ids 2.7.1.23;
allgo_ids GO:0003951; GO:0006741; GO:0005737; GO:0005524; GO:0046872; GO:0019674;
allko_ids K00858;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441691.1 1 294 evalue:5.6e-58 qcov:99.70 identity:48.00;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
metacyc_pathway_id PWY-5083; NADPHOS-DEPHOS-PWY;
metacyc_pathway_name NAD/NADH phosphorylation and dephosphorylation;; NAD phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; NAD-Metabolism;;
pfam_acc PF01513;
pfam_desc ATP-NAD kinase;
pfam_id NAD_kinase;
pfam_target db:Pfam-A.hmm|PF01513.21 evalue:2.3e-49 score:167.4 best_domain_score:167.1 name:NAD_kinase;
sprot_desc NAD kinase 2;
sprot_id sp|Q829B4|NADK2_STRAW;
sprot_target db:uniprot_sprot|sp|Q829B4|NADK2_STRAW 3 294 evalue:8.0e-43 qcov:99.00 identity:39.50;
109383 108454 CDS
ID metaerg.pl|04252
allec_ids 2.1.1.226;
allgo_ids GO:0008168; GO:0032259; GO:0005618; GO:0005737; GO:0005576; GO:0020002; GO:0016020; GO:0003723; GO:0090729; GO:0044179; GO:0006364;
allko_ids K06442;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669758.1 7 273 evalue:1.1e-64 qcov:86.40 identity:53.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF01728; PF01479;
pfam_desc FtsJ-like methyltransferase; S4 domain;
pfam_id FtsJ; S4;
pfam_target db:Pfam-A.hmm|PF01728.19 evalue:3.7e-16 score:59.0 best_domain_score:58.3 name:FtsJ; db:Pfam-A.hmm|PF01479.25 evalue:6.3e-11 score:41.1 best_domain_score:40.2 name:S4;
sprot_desc 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA;
sprot_id sp|P9WJ62|TLYA_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WJ62|TLYA_MYCTO 6 270 evalue:1.7e-51 qcov:85.80 identity:47.00;
tigrfam_acc TIGR00478;
tigrfam_desc TlyA family rRNA methyltransferase/putative hemolysin;
tigrfam_mainrole Unknown function;
tigrfam_name tly;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00478 evalue:9.3e-68 score:227.1 best_domain_score:226.9 name:TIGR00478;
109651 109373 CDS
ID metaerg.pl|04253
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
110488 109676 CDS
ID metaerg.pl|04254
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667408.1 6 268 evalue:1.6e-35 qcov:97.40 identity:41.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
pfam_acc PF14559;
pfam_desc Tetratricopeptide repeat;
pfam_id TPR_19;
pfam_target db:Pfam-A.hmm|PF14559.6 evalue:7.9e-07 score:28.7 best_domain_score:15.6 name:TPR_19;
110671 110568 bac_5SrRNA
ID metaerg.pl|04255
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.84956; 42.2546; 0.427381; 50.9588; 3.4272;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_24_length_108537_cov_94.0517
2587 365 CDS
ID metaerg.pl|04256
allgo_ids GO:0000155; GO:0007165;
allko_ids K13598; K07641; K07646; K07639; K08475; K01120; K07673; K07652; K07654; K07682; K00936; K07649; K03407; K07637; K07679; K02478; K07648; K07651; K07718; K07698; K07778; K07683; K11354; K11633; K07768; K00873; K07711; K13533; K11328; K00760; K02484; K11356; K11640; K11711; K07642; K07643; K11231; K02491; K13490; K07708; K07645; K07677; K10909; K07704; K01937; K08282; K02489; K07697; K07716; K07640; K07710; K07656; K01768; K02668; K03388; K08479; K07674; K10916; K02030; K11527; K13587; K10715; K07678; K08801; K02482; K14489; K02480; K07653; K07638; K07636; K07709; K13532; K07644; K01769; K07650; K06379; K10681; K07676; K07647; K13040; K10942; K07675; K07717; K12767; K13761; K02486; K11383; K14509; K11520; K07769; K11617; K04757; K11629; K10125; K11357;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__XJSP;s__XJSP sp002900965;
genomedb_acc GCF_002900965.1;
genomedb_target db:genomedb|GCF_002900965.1|WP_103335459.1 5 727 evalue:6.6e-164 qcov:97.70 identity:48.10;
kegg_pathway_id 00790; 04011; 02020; 03090; 00620; 05111; 00230; 00240; 00710; 00010; 00983;
kegg_pathway_name Folate biosynthesis; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Drug metabolism - other enzymes;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF02518; PF00512; PF01627; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Hpt domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; Hpt; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:9.2e-30 score:102.7 best_domain_score:101.9 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:3.9e-17 score:61.3 best_domain_score:59.6 name:HisKA; db:Pfam-A.hmm|PF01627.23 evalue:1.5e-06 score:27.6 best_domain_score:27.6 name:Hpt; db:Pfam-A.hmm|PF00072.24 evalue:4.7e-29 score:100.0 best_domain_score:97.3 name:Response_reg;
tm_num 2;
2587 365 transmembrane_helix
ID metaerg.pl|04257
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology o377-445i896-964o;
3147 2623 CDS
ID metaerg.pl|04258
allgo_ids GO:0042128;
allko_ids K02016;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rubellimicrobium;s__Rubellimicrobium mesophilum;
genomedb_acc GCF_000600335.2;
genomedb_target db:genomedb|GCF_000600335.2|WP_051521329.1 24 172 evalue:8.5e-46 qcov:85.60 identity:60.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00174;
pfam_desc Oxidoreductase molybdopterin binding domain;
pfam_id Oxidored_molyb;
pfam_target db:Pfam-A.hmm|PF00174.19 evalue:2.6e-05 score:23.1 best_domain_score:22.5 name:Oxidored_molyb;
sp YES;
tm_num 1;
2623 2703 signal_peptide
ID metaerg.pl|04259
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
3147 2623 transmembrane_helix
ID metaerg.pl|04260
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i2641-2709o;
5504 3201 CDS
ID metaerg.pl|04261
allgo_ids GO:0000155; GO:0007165;
allko_ids K07652; K07673; K01120; K08475; K07639; K07646; K07641; K13598; K07637; K03407; K07777; K00936; K07682; K07649; K07654; K07698; K07718; K11623; K07651; K07648; K02478; K07679; K11328; K13533; K08884; K00873; K07711; K02575; K07768; K11633; K11354; K07683; K07778; K11640; K04486; K11356; K00760; K02484; K07642; K11711; K13490; K02491; K11231; K07643; K08282; K01937; K10909; K07704; K07645; K07708; K07677; K01768; K07656; K07710; K07640; K07716; K02489; K07697; K10916; K08479; K07674; K03388; K02668; K07678; K10715; K02026; K13587; K02030; K11527; K07636; K07653; K07638; K02480; K14489; K02482; K08801; K07644; K13532; K07709; K07676; K10681; K06379; K07650; K01769; K07717; K07675; K13040; K10942; K07680; K07647; K11357; K02342; K10125; K11629; K04757; K11617; K14509; K11520; K07769; K02486; K00384; K13761; K11383; K12767;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__XJSP;s__XJSP sp002900965;
genomedb_acc GCF_002900965.1;
genomedb_target db:genomedb|GCF_002900965.1|WP_103335457.1 1 738 evalue:1.4e-204 qcov:96.20 identity:53.50;
kegg_pathway_id 00620; 03090; 02020; 04011; 00340; 00790; 00983; 00010; 00710; 00240; 03030; 00230; 05111;
kegg_pathway_name Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Histidine metabolism; Folate biosynthesis; Drug metabolism - other enzymes; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Pyrimidine metabolism; DNA replication; Purine metabolism; Vibrio cholerae pathogenic cycle;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF02518; PF00512; PF00989; PF08447; PF08448; PF13188; PF13426; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:6.9e-26 score:90.2 best_domain_score:88.6 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.2e-13 score:50.1 best_domain_score:48.5 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:6.3e-09 score:35.1 best_domain_score:20.4 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:1.3e-07 score:31.0 best_domain_score:17.8 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:1.8e-11 score:43.5 best_domain_score:25.7 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:3.7e-05 score:22.9 best_domain_score:20.8 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:5.2e-20 score:70.9 best_domain_score:45.7 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:4.4e-48 score:161.4 best_domain_score:82.9 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:3.6e-20 score:71.5 best_domain_score:53.9 name:TIGR00229;
6494 6931 CDS
ID metaerg.pl|04262
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084634808.1 24 145 evalue:2.3e-44 qcov:84.10 identity:79.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
tm_num 3;
6494 6931 transmembrane_helix
ID metaerg.pl|04263
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i6620-6679o6707-6775i6788-6856o;
8600 7158 CDS
ID metaerg.pl|04264
allec_ids 6.3.5.10;
allgo_ids GO:0003824; GO:0009236; GO:0015420; GO:0006541;
allko_ids K02232;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseivivax;s__Roseivivax jejudonensis;
genomedb_acc GCF_900172265.1;
genomedb_target db:genomedb|GCF_900172265.1|WP_085792483.1 1 479 evalue:6.7e-218 qcov:99.80 identity:78.50;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id P381-PWY;
metacyc_pathway_name adenosylcobalamin biosynthesis II (aerobic);;
metacyc_pathway_type De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;;
pfam_acc PF13500; PF01656; PF07685;
pfam_desc AAA domain; CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain;
pfam_id AAA_26; CbiA; GATase_3;
pfam_target db:Pfam-A.hmm|PF13500.6 evalue:4.9e-17 score:61.6 best_domain_score:60.3 name:AAA_26; db:Pfam-A.hmm|PF01656.23 evalue:2.4e-19 score:68.9 best_domain_score:68.2 name:CbiA; db:Pfam-A.hmm|PF07685.14 evalue:1.6e-53 score:180.5 best_domain_score:180.1 name:GATase_3;
sprot_desc Cobyric acid synthase;
sprot_id sp|Q28N58|COBQ_JANSC;
sprot_target db:uniprot_sprot|sp|Q28N58|COBQ_JANSC 3 476 evalue:2.2e-207 qcov:98.80 identity:74.90;
tigrfam_acc TIGR00313;
tigrfam_desc cobyric acid synthase CobQ;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cobQ;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00313 evalue:6.9e-126 score:420.0 best_domain_score:419.8 name:TIGR00313;
9479 8871 CDS
ID metaerg.pl|04265
allec_ids 2.5.1.17;
allgo_ids GO:0005524; GO:0008817; GO:0009236; GO:0005737; GO:0006779;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Maliponia;s__Maliponia aquimaris;
genomedb_acc GCF_900184945.1;
genomedb_target db:genomedb|GCF_900184945.1|WP_094019952.1 1 202 evalue:2.2e-101 qcov:100.00 identity:87.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PWY-6268; P381-PWY;
metacyc_pathway_name adenosylcobalamin salvage from cobalamin;; adenosylcobalamin biosynthesis II (aerobic);;
metacyc_pathway_type Cobamide-Salvage;; De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;;
pfam_acc PF02572;
pfam_desc ATP:corrinoid adenosyltransferase BtuR/CobO/CobP;
pfam_id CobA_CobO_BtuR;
pfam_target db:Pfam-A.hmm|PF02572.15 evalue:1.1e-58 score:197.6 best_domain_score:197.3 name:CobA_CobO_BtuR;
sprot_desc Corrinoid adenosyltransferase;
sprot_id sp|P29930|COBO_SINSX;
sprot_target db:uniprot_sprot|sp|P29930|COBO_SINSX 7 202 evalue:1.5e-69 qcov:97.00 identity:65.80;
tigrfam_acc TIGR00708;
tigrfam_desc cob(I)yrinic acid a,c-diamide adenosyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cobA;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00708 evalue:1.6e-63 score:212.8 best_domain_score:212.4 name:TIGR00708;
10928 9726 CDS
ID metaerg.pl|04266
allgo_ids GO:0005525;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicimonas_A;s__Tropicimonas_A sediminicola;
genomedb_acc GCF_900188335.1;
genomedb_target db:genomedb|GCF_900188335.1|WP_089233405.1 5 400 evalue:3.5e-196 qcov:99.00 identity:84.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF02492; PF07683;
pfam_desc CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain;
pfam_id cobW; CobW_C;
pfam_target db:Pfam-A.hmm|PF02492.19 evalue:6.9e-55 score:184.6 best_domain_score:184.3 name:cobW; db:Pfam-A.hmm|PF07683.14 evalue:4.7e-26 score:89.8 best_domain_score:88.6 name:CobW_C;
sprot_desc Putative metal chaperone YciC;
sprot_id sp|P94400|YCIC_BACSU;
sprot_target db:uniprot_sprot|sp|P94400|YCIC_BACSU 6 397 evalue:1.1e-100 qcov:98.00 identity:49.00;
12104 10998 CDS
ID metaerg.pl|04267
allec_ids 3.6.-.-;
allgo_ids GO:0005829; GO:0005525; GO:0003924; GO:0042802; GO:0046914; GO:0006974;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482434.1 1 350 evalue:1.3e-131 qcov:95.10 identity:70.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF02492; PF07683;
pfam_desc CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain;
pfam_id cobW; CobW_C;
pfam_target db:Pfam-A.hmm|PF02492.19 evalue:7.2e-48 score:161.7 best_domain_score:161.3 name:cobW; db:Pfam-A.hmm|PF07683.14 evalue:3.9e-14 score:51.6 best_domain_score:50.4 name:CobW_C;
sprot_desc P-loop guanosine triphosphatase YjiA;
sprot_id sp|P24203|YJIA_ECOLI;
sprot_target db:uniprot_sprot|sp|P24203|YJIA_ECOLI 3 351 evalue:7.9e-40 qcov:94.80 identity:34.00;
12236 12505 CDS
ID metaerg.pl|04268
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__59-46-T64;s__59-46-T64 sp003205515;
genomedb_acc GCF_003205515.1;
genomedb_target db:genomedb|GCF_003205515.1|WP_110795593.1 1 84 evalue:5.5e-17 qcov:94.40 identity:53.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
12855 13094 CDS
ID metaerg.pl|04269
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246883.1 1 77 evalue:3.4e-34 qcov:97.50 identity:87.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF06945;
pfam_desc Protein of unknown function (DUF1289);
pfam_id DUF1289;
pfam_target db:Pfam-A.hmm|PF06945.13 evalue:7.2e-11 score:41.0 best_domain_score:40.4 name:DUF1289;
13580 13110 CDS
ID metaerg.pl|04270
allgo_ids GO:0006879; GO:0008199;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480231.1 1 156 evalue:9.9e-70 qcov:100.00 identity:88.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00210;
pfam_desc Ferritin-like domain;
pfam_id Ferritin;
pfam_target db:Pfam-A.hmm|PF00210.24 evalue:7e-20 score:70.6 best_domain_score:70.4 name:Ferritin;
15369 14482 CDS
ID metaerg.pl|04271
allgo_ids GO:0008703; GO:0009231; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068288138.1 1 272 evalue:1.0e-104 qcov:92.20 identity:71.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF01872;
pfam_desc RibD C-terminal domain;
pfam_id RibD_C;
pfam_target db:Pfam-A.hmm|PF01872.17 evalue:1e-32 score:112.8 best_domain_score:112.5 name:RibD_C;
16181 15384 CDS
ID metaerg.pl|04272
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__TH137;s__TH137 sp002855575;
genomedb_acc GCF_002855575.1;
genomedb_target db:genomedb|GCF_002855575.1|WP_101919229.1 1 260 evalue:5.4e-76 qcov:98.10 identity:61.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF13649;
pfam_desc Methyltransferase domain;
pfam_id Methyltransf_25;
pfam_target db:Pfam-A.hmm|PF13649.6 evalue:1.3e-07 score:31.4 best_domain_score:30.5 name:Methyltransf_25;
16580 16185 CDS
ID metaerg.pl|04273
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068288143.1 1 131 evalue:5.2e-64 qcov:100.00 identity:93.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF01242;
pfam_desc 6-pyruvoyl tetrahydropterin synthase;
pfam_id PTPS;
pfam_target db:Pfam-A.hmm|PF01242.19 evalue:1.2e-17 score:63.2 best_domain_score:63.1 name:PTPS;
17555 16605 CDS
ID metaerg.pl|04274
allgo_ids GO:0016616; GO:0051287; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp002282555;
genomedb_acc GCA_002282555.1;
genomedb_target db:genomedb|GCA_002282555.1|OZB20207.1 1 315 evalue:4.1e-115 qcov:99.70 identity:69.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF13450; PF03721;
pfam_desc NAD(P)-binding Rossmann-like domain; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain;
pfam_id NAD_binding_8; UDPG_MGDP_dh_N;
pfam_target db:Pfam-A.hmm|PF13450.6 evalue:4e-05 score:23.0 best_domain_score:22.1 name:NAD_binding_8; db:Pfam-A.hmm|PF03721.14 evalue:5.6e-05 score:22.0 best_domain_score:21.4 name:UDPG_MGDP_dh_N;
18074 18826 CDS
ID metaerg.pl|04275
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_082896214.1 9 250 evalue:8.6e-100 qcov:96.80 identity:74.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF05050;
pfam_desc Methyltransferase FkbM domain;
pfam_id Methyltransf_21;
pfam_target db:Pfam-A.hmm|PF05050.12 evalue:4.8e-12 score:45.5 best_domain_score:45.0 name:Methyltransf_21;
tigrfam_acc TIGR01444;
tigrfam_desc methyltransferase, FkbM family;
tigrfam_name fkbM_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01444 evalue:9.2e-19 score:67.5 best_domain_score:67.0 name:TIGR01444;
19662 18805 CDS
ID metaerg.pl|04276
allec_ids 3.1.3.25;
allgo_ids GO:0046854; GO:0008934; GO:0052832; GO:0052833; GO:0046872; GO:0046855;
allko_ids K01092;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068288155.1 26 281 evalue:5.6e-103 qcov:89.80 identity:74.80;
kegg_pathway_id 00521; 00562;
kegg_pathway_name Streptomycin biosynthesis; Inositol phosphate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PWY-2301;
metacyc_pathway_name myo-inositol biosynthesis;;
metacyc_pathway_type Cyclitols-Biosynthesis;;
pfam_acc PF00459;
pfam_desc Inositol monophosphatase family;
pfam_id Inositol_P;
pfam_target db:Pfam-A.hmm|PF00459.25 evalue:3.2e-54 score:183.5 best_domain_score:183.3 name:Inositol_P;
sprot_desc Inositol-1-monophosphatase;
sprot_id sp|Q92M71|SUHB_RHIME;
sprot_target db:uniprot_sprot|sp|Q92M71|SUHB_RHIME 27 263 evalue:4.7e-48 qcov:83.20 identity:45.60;
20157 19744 CDS
ID metaerg.pl|04277
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468463.1 1 137 evalue:7.7e-42 qcov:100.00 identity:64.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF06676;
pfam_desc Protein of unknown function (DUF1178);
pfam_id DUF1178;
pfam_target db:Pfam-A.hmm|PF06676.11 evalue:3.1e-46 score:156.7 best_domain_score:153.4 name:DUF1178;
20272 20781 CDS
ID metaerg.pl|04278
allec_ids 1.11.1.22;
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005829; GO:0005739; GO:0004602; GO:0004601; GO:0034599;
allko_ids K00432; K20207;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479052.1 1 169 evalue:1.1e-69 qcov:100.00 identity:76.90;
kegg_pathway_id 00590; 00480;
kegg_pathway_name Arachidonic acid metabolism; Glutathione metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00578; PF00255;
pfam_desc AhpC/TSA family; Glutathione peroxidase;
pfam_id AhpC-TSA; GSHPx;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:5.2e-05 score:22.4 best_domain_score:21.9 name:AhpC-TSA; db:Pfam-A.hmm|PF00255.19 evalue:5.5e-26 score:89.5 best_domain_score:89.2 name:GSHPx;
sp YES;
sprot_desc Hydroperoxy fatty acid reductase gpx1;
sprot_id sp|P74250|GPX1_SYNY3;
sprot_target db:uniprot_sprot|sp|P74250|GPX1_SYNY3 20 155 evalue:3.3e-25 qcov:80.50 identity:40.10;
20272 20328 signal_peptide
ID metaerg.pl|04279
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
20840 21961 CDS
ID metaerg.pl|04280
allec_ids 3.5.1.98;
allgo_ids GO:0005737; GO:0000118; GO:0034399; GO:0005634; GO:0070210; GO:0034967; GO:0004407; GO:0017136; GO:0032041; GO:0045129; GO:0016575; GO:0070932; GO:0070933; GO:0045835; GO:0032874; GO:0045944; GO:0006355;
allko_ids K11483;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479051.1 1 367 evalue:7.6e-169 qcov:98.40 identity:78.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00850;
pfam_desc Histone deacetylase domain;
pfam_id Hist_deacetyl;
pfam_target db:Pfam-A.hmm|PF00850.19 evalue:6.6e-59 score:199.1 best_domain_score:198.9 name:Hist_deacetyl;
sprot_desc Probable histone deacetylase HOS2;
sprot_id sp|P53096|HOS2_YEAST;
sprot_target db:uniprot_sprot|sp|P53096|HOS2_YEAST 16 315 evalue:8.3e-29 qcov:80.40 identity:31.40;
23825 21969 CDS
ID metaerg.pl|04281
allgo_ids GO:0005524;
allko_ids K07680; K07675; K11637; K07769; K02486; K02342; K02476; K04757; K07709; K01769; K06379; K07701; K11527; K02480; K08801; K02482; K07636; K07653; K11614; K01768; K07710; K02668; K02491; K07708; K08282; K02484; K04486; K11711; K07642; K07651; K13533; K07673; K07641; K07646; K07777; K07654; K03407;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479412.1 8 617 evalue:2.3e-271 qcov:98.70 identity:78.00;
kegg_pathway_id 03030; 00340; 00230; 03090; 02020;
kegg_pathway_name DNA replication; Histidine metabolism; Purine metabolism; Type II secretion system; Two-component system - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00004; PF07728; PF01078; PF00989; PF08448; PF12860; PF13188; PF13426; PF00158; PF14532;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); Magnesium chelatase, subunit ChlI; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Sigma-54 interaction domain; Sigma-54 interaction domain;
pfam_id AAA; AAA_5; Mg_chelatase; PAS; PAS_4; PAS_7; PAS_8; PAS_9; Sigma54_activat; Sigma54_activ_2;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:5.8e-05 score:22.8 best_domain_score:18.7 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:1.9e-05 score:23.9 best_domain_score:22.0 name:AAA_5; db:Pfam-A.hmm|PF01078.21 evalue:2.5e-05 score:23.0 best_domain_score:11.6 name:Mg_chelatase; db:Pfam-A.hmm|PF00989.25 evalue:2.2e-18 score:65.6 best_domain_score:54.0 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:1e-11 score:44.3 best_domain_score:32.8 name:PAS_4; db:Pfam-A.hmm|PF12860.7 evalue:3.3e-08 score:32.9 best_domain_score:28.8 name:PAS_7; db:Pfam-A.hmm|PF13188.7 evalue:3.6e-13 score:48.4 best_domain_score:25.7 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:4.2e-15 score:55.1 best_domain_score:48.2 name:PAS_9; db:Pfam-A.hmm|PF00158.26 evalue:1e-53 score:180.7 best_domain_score:180.1 name:Sigma54_activat; db:Pfam-A.hmm|PF14532.6 evalue:3.7e-17 score:62.0 best_domain_score:59.1 name:Sigma54_activ_2;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.3e-19 score:69.7 best_domain_score:68.4 name:TIGR00229;
24034 25410 CDS
ID metaerg.pl|04282
allgo_ids GO:0005886; GO:0006811; GO:0042128;
allko_ids K02051; K15576;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479411.1 1 458 evalue:1.0e-247 qcov:100.00 identity:89.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF09084; PF13379;
pfam_desc NMT1/THI5 like; NMT1-like family;
pfam_id NMT1; NMT1_2;
pfam_target db:Pfam-A.hmm|PF09084.11 evalue:8.7e-07 score:28.3 best_domain_score:26.7 name:NMT1; db:Pfam-A.hmm|PF13379.6 evalue:2.5e-82 score:275.6 best_domain_score:275.1 name:NMT1_2;
sprot_desc Nitrate/nitrite binding protein NrtA;
sprot_id sp|Q44292|NRTA_NOSS1;
sprot_target db:uniprot_sprot|sp|Q44292|NRTA_NOSS1 101 457 evalue:2.7e-53 qcov:77.90 identity:31.10;
25414 26247 CDS
ID metaerg.pl|04283
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015112; GO:0042128;
allko_ids K02050; K15577;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071471047.1 1 277 evalue:2.5e-132 qcov:100.00 identity:88.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.9e-18 score:66.1 best_domain_score:66.1 name:BPD_transp_1;
sp YES;
sprot_desc Nitrate import permease protein NrtB;
sprot_id sp|P73451|NRTB_SYNY3;
sprot_target db:uniprot_sprot|sp|P73451|NRTB_SYNY3 34 277 evalue:2.3e-52 qcov:88.10 identity:44.10;
tigrfam_acc TIGR01183;
tigrfam_desc nitrate ABC transporter, permease protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ntrB;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01183 evalue:3.7e-67 score:225.1 best_domain_score:224.6 name:TIGR01183;
tm_num 7;
25414 25506 signal_peptide
ID metaerg.pl|04284
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
25414 26247 transmembrane_helix
ID metaerg.pl|04285
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology o25441-25500i25690-25758o25786-25845i25864-25932o25975-26037i26056-26124o26152-26220i;
26261 27199 CDS
ID metaerg.pl|04286
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0015112;
allko_ids K10235; K05816; K11076; K01995; K02065; K02049; K02031; K01998; K10111; K10112; K02000; K01990; K10243; K02023; K02018; K11084; K02032; K02017; K01997; K02003; K02010; K05847; K02052; K02006; K11072; K02045; K06861; K02071; K01996; K11953;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087205966.1 1 312 evalue:7.1e-152 qcov:100.00 identity:88.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PWY-6135; PWY-6171; PWY-6188; PWY-6166; PWYG-321; PWY-6113;
metacyc_pathway_name ; ; ; ; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.1e-32 score:112.7 best_domain_score:112.1 name:ABC_tran;
sprot_desc Bicarbonate transport ATP-binding protein CmpD;
sprot_id sp|Q55463|CMPD_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55463|CMPD_SYNY3 5 259 evalue:1.6e-70 qcov:81.70 identity:51.80;
tigrfam_acc TIGR01184;
tigrfam_desc nitrate ABC transporter, ATP-binding proteins C and D;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ntrCD;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01184 evalue:5e-90 score:300.2 best_domain_score:300.0 name:TIGR01184;
27230 27700 CDS
ID metaerg.pl|04287
allec_ids 4.2.1.104;
allgo_ids GO:0009439; GO:0008824; GO:0003677;
allko_ids K01725;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479409.1 1 156 evalue:8.9e-71 qcov:100.00 identity:85.90;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PWY0-1471; CYANCAT-PWY;
metacyc_pathway_name uracil degradation III;; cyanate degradation;;
metacyc_pathway_type Uracil-Degradation;; Detoxification; NITROGEN-DEG;;
pfam_acc PF02560;
pfam_desc Cyanate lyase C-terminal domain;
pfam_id Cyanate_lyase;
pfam_target db:Pfam-A.hmm|PF02560.14 evalue:2.6e-34 score:116.1 best_domain_score:115.6 name:Cyanate_lyase;
sprot_desc Cyanate hydratase;
sprot_id sp|A6W1Q1|CYNS_MARMS;
sprot_target db:uniprot_sprot|sp|A6W1Q1|CYNS_MARMS 11 156 evalue:5.5e-43 qcov:93.60 identity:57.50;
tigrfam_acc TIGR00673;
tigrfam_desc cyanase;
tigrfam_mainrole Cellular processes;
tigrfam_name cynS;
tigrfam_sub1role Detoxification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00673 evalue:4.9e-42 score:142.6 best_domain_score:142.5 name:TIGR00673;
28778 27753 CDS
ID metaerg.pl|04288
allgo_ids GO:0003847; GO:0016042;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__TH137;s__TH137 sp002855575;
genomedb_acc GCF_002855575.1;
genomedb_target db:genomedb|GCF_002855575.1|WP_101922598.1 9 340 evalue:2.7e-120 qcov:97.40 identity:65.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF03403;
pfam_desc Platelet-activating factor acetylhydrolase, isoform II;
pfam_id PAF-AH_p_II;
pfam_target db:Pfam-A.hmm|PF03403.13 evalue:1.3e-05 score:23.1 best_domain_score:17.3 name:PAF-AH_p_II;
sp YES;
27753 27818 signal_peptide
ID metaerg.pl|04289
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
28933 29925 CDS
ID metaerg.pl|04290
allgo_ids GO:0003700; GO:0006355; GO:0043565;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__TH137;s__TH137 sp002855575;
genomedb_acc GCF_002855575.1;
genomedb_target db:genomedb|GCF_002855575.1|WP_101922599.1 1 329 evalue:1.1e-102 qcov:99.70 identity:64.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF12833; PF00165;
pfam_desc Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF12833.7 evalue:8.9e-17 score:60.4 best_domain_score:59.1 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:2.6e-06 score:26.6 best_domain_score:25.0 name:HTH_AraC;
tm_num 6;
28933 29925 transmembrane_helix
ID metaerg.pl|04291
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i28936-28995o29008-29076i29089-29157o29248-29316i29374-29442o29470-29538i;
31229 29937 CDS
ID metaerg.pl|04292
allec_ids 2.7.8.-;
allgo_ids GO:0003824; GO:0016021; GO:0005886; GO:0008808; GO:0032049;
allko_ids K06131;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479446.1 8 430 evalue:8.5e-188 qcov:98.40 identity:76.40;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PWY-6385; PWY4FS-4; PHOSLIPSYN2-PWY; PWY-5668; TEICHOICACID-PWY; PHOSLIPSYN-PWY;
metacyc_pathway_name peptidoglycan biosynthesis III (mycobacteria);; phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; cardiolipin biosynthesis I;; poly(glycerol phosphate) wall teichoic acid biosynthesis;; superpathway of phospholipid biosynthesis I (bacteria);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;; Teichoic-Acids-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;;
pfam_acc PF00614; PF13091;
pfam_desc Phospholipase D Active site motif; PLD-like domain;
pfam_id PLDc; PLDc_2;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:1.1e-11 score:43.6 best_domain_score:20.5 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:8.8e-42 score:141.4 best_domain_score:97.4 name:PLDc_2;
sp YES;
sprot_desc Cardiolipin synthase;
sprot_id sp|O66043|CLS_BACPE;
sprot_target db:uniprot_sprot|sp|O66043|CLS_BACPE 58 426 evalue:2.4e-56 qcov:85.80 identity:35.60;
tm_num 1;
29937 30020 signal_peptide
ID metaerg.pl|04293
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
31229 29937 transmembrane_helix
ID metaerg.pl|04294
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i29970-30038o;
32841 31222 CDS
ID metaerg.pl|04295
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479447.1 4 534 evalue:4.9e-177 qcov:98.50 identity:61.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF13454;
pfam_desc FAD-NAD(P)-binding;
pfam_id NAD_binding_9;
pfam_target db:Pfam-A.hmm|PF13454.6 evalue:5.2e-28 score:97.2 best_domain_score:96.2 name:NAD_binding_9;
sp YES;
31222 31308 signal_peptide
ID metaerg.pl|04296
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
33773 32841 CDS
ID metaerg.pl|04297
allgo_ids GO:0006812; GO:0008324; GO:0016021; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481843.1 4 310 evalue:1.3e-134 qcov:99.00 identity:84.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF01545;
pfam_desc Cation efflux family;
pfam_id Cation_efflux;
pfam_target db:Pfam-A.hmm|PF01545.21 evalue:3.3e-30 score:104.5 best_domain_score:104.2 name:Cation_efflux;
tm_num 6;
33773 32841 transmembrane_helix
ID metaerg.pl|04298
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i32865-32933o32961-33020i33078-33146o33189-33257i33315-33383o33411-33479i;
36247 33800 CDS
ID metaerg.pl|04299
allec_ids 1.1.99.22;
allgo_ids GO:0005576; GO:0016021; GO:0047955; GO:0048038;
allko_ids K05358; K08852; K14028; K08860; K11715; K00114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084634647.1 8 815 evalue:0.0e+00 qcov:99.10 identity:81.20;
kegg_pathway_id 00680; 00640; 00650; 00400; 00631; 00010;
kegg_pathway_name Methane metabolism; Propanoate metabolism; Butanoate metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; 1,2-Dichloroethane degradation; Glycolysis / Gluconeogenesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF01011; PF13360; PF13570;
pfam_desc PQQ enzyme repeat; PQQ-like domain; PQQ-like domain;
pfam_id PQQ; PQQ_2; PQQ_3;
pfam_target db:Pfam-A.hmm|PF01011.21 evalue:7.7e-29 score:97.5 best_domain_score:16.0 name:PQQ; db:Pfam-A.hmm|PF13360.6 evalue:1.9e-21 score:76.0 best_domain_score:22.5 name:PQQ_2; db:Pfam-A.hmm|PF13570.6 evalue:4.6e-16 score:58.0 best_domain_score:15.8 name:PQQ_3;
sprot_desc Glycerol dehydrogenase large subunit;
sprot_id sp|Q8KIL1|SLDA_GLUTH;
sprot_target db:uniprot_sprot|sp|Q8KIL1|SLDA_GLUTH 186 814 evalue:3.0e-124 qcov:77.20 identity:39.60;
tm_num 5;
36247 33800 transmembrane_helix
ID metaerg.pl|04300
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i33860-33928o33956-34024i34043-34111o34121-34189i34226-34285o;
37523 36639 CDS
ID metaerg.pl|04301
allec_ids 3.5.1.10;
allgo_ids GO:0009058; GO:0016742; GO:0008864; GO:0006189; GO:0006730;
allko_ids K11788; K11787; K01933; K01945; K11175;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246897.1 1 294 evalue:2.9e-147 qcov:100.00 identity:88.40;
kegg_pathway_id 00230; 00670;
kegg_pathway_name Purine metabolism; One carbon pool by folate;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id 1CMET2-PWY; PWY-2201;
metacyc_pathway_name N10-formyl-tetrahydrofolate biosynthesis;; folate transformations I;;
metacyc_pathway_type Folate-Biosynthesis;; Folate-Transformations;;
pfam_acc PF13740; PF00551;
pfam_desc ACT domain; Formyl transferase;
pfam_id ACT_6; Formyl_trans_N;
pfam_target db:Pfam-A.hmm|PF13740.6 evalue:1.7e-05 score:23.9 best_domain_score:21.8 name:ACT_6; db:Pfam-A.hmm|PF00551.19 evalue:2.2e-38 score:131.0 best_domain_score:130.6 name:Formyl_trans_N;
sp YES;
sprot_desc Formyltetrahydrofolate deformylase;
sprot_id sp|Q46339|PURU_CORS1;
sprot_target db:uniprot_sprot|sp|Q46339|PURU_CORS1 4 280 evalue:7.6e-78 qcov:94.20 identity:50.40;
tigrfam_acc TIGR00655;
tigrfam_desc formyltetrahydrofolate deformylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name PurU;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00655 evalue:2.9e-98 score:328.1 best_domain_score:327.9 name:TIGR00655;
36639 36722 lipoprotein_signal_peptide
ID metaerg.pl|04302
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
37806 39404 CDS
ID metaerg.pl|04303
allgo_ids GO:0043190; GO:0042597; GO:0055085;
allko_ids K02035; K13889;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386157.1 10 532 evalue:1.7e-270 qcov:98.30 identity:88.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:4.3e-77 score:258.8 best_domain_score:258.4 name:SBP_bac_5;
sp YES;
sprot_desc Glutathione-binding protein GsiB;
sprot_id sp|Q6D3B0|GSIB_PECAS;
sprot_target db:uniprot_sprot|sp|Q6D3B0|GSIB_PECAS 15 491 evalue:6.9e-37 qcov:89.70 identity:26.50;
tm_num 1;
37806 37901 signal_peptide
ID metaerg.pl|04304
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
37806 39404 transmembrane_helix
ID metaerg.pl|04305
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i37842-37910o;
39503 40489 CDS
ID metaerg.pl|04306
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015031;
allko_ids K13890; K02033; K13894;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798174.1 1 327 evalue:3.9e-161 qcov:99.70 identity:93.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:3e-38 score:130.7 best_domain_score:130.7 name:BPD_transp_1;
sprot_desc Dipeptide transport system permease protein DppB;
sprot_id sp|P94311|DPPB_BACPE;
sprot_target db:uniprot_sprot|sp|P94311|DPPB_BACPE 1 320 evalue:1.2e-55 qcov:97.60 identity:36.70;
tm_num 6;
39503 40489 transmembrane_helix
ID metaerg.pl|04307
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i39527-39595o39797-39865i39902-39970o40067-40126i40226-40294o40379-40447i;
40501 41442 CDS
ID metaerg.pl|04308
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015031;
allko_ids K02034;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798175.1 1 313 evalue:9.3e-160 qcov:100.00 identity:92.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00528; PF12911;
pfam_desc Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C;
pfam_id BPD_transp_1; OppC_N;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:2.1e-27 score:95.3 best_domain_score:95.3 name:BPD_transp_1; db:Pfam-A.hmm|PF12911.7 evalue:3.2e-09 score:35.9 best_domain_score:35.9 name:OppC_N;
sprot_desc Dipeptide transport system permease protein DppC;
sprot_id sp|P94312|DPPC_BACPE;
sprot_target db:uniprot_sprot|sp|P94312|DPPC_BACPE 6 313 evalue:2.0e-44 qcov:98.40 identity:37.30;
tm_num 6;
40501 41442 transmembrane_helix
ID metaerg.pl|04309
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i40588-40656o40807-40875i40933-40992o41020-41079i41170-41238o41335-41403i;
41442 42425 CDS
ID metaerg.pl|04310
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0022857; GO:0015031; GO:0030435; GO:0055085;
allko_ids K12371; K02052; K02006; K02010; K05847; K02034; K02032; K02017; K13896; K02071; K06861; K01996; K02045; K02031; K10111; K01995; K02049; K02023; K02000; K16202;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798178.1 3 326 evalue:1.8e-166 qcov:99.10 identity:92.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF13304; PF00005; PF08352;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id AAA_21; ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.6e-06 score:27.4 best_domain_score:25.6 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.7e-29 score:101.6 best_domain_score:101.2 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:1.1e-17 score:63.6 best_domain_score:62.8 name:oligo_HPY;
sprot_desc Dipeptide transport ATP-binding protein DppD;
sprot_id sp|P26905|DPPD_BACSU;
sprot_target db:uniprot_sprot|sp|P26905|DPPD_BACSU 1 325 evalue:2.8e-81 qcov:99.40 identity:47.90;
tigrfam_acc TIGR01727;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name oligo_HPY;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:4.2e-25 score:86.8 best_domain_score:86.1 name:TIGR01727;
42415 43419 CDS
ID metaerg.pl|04311
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0015031;
allko_ids K11072; K02068; K02045; K01996; K02071; K06861; K13896; K11084; K02017; K02032; K05847; K02010; K02006; K02052; K02000; K02023; K12372; K05816; K02049; K01995; K10111; K02031;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480629.1 4 332 evalue:4.6e-157 qcov:98.50 identity:83.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PWY-6166; PWY-6188; PWY-6171; PWY-6135; PWY-6113; PWYG-321;
metacyc_pathway_name ; ; ; ; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00005; PF08352;
pfam_desc ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.6e-33 score:115.3 best_domain_score:114.6 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:1.5e-16 score:59.9 best_domain_score:58.8 name:oligo_HPY;
sprot_desc Putative peptide import ATP-binding protein BruAb2_1034;
sprot_id sp|Q8VQK7|Y1034_BRUAB;
sprot_target db:uniprot_sprot|sp|Q8VQK7|Y1034_BRUAB 4 323 evalue:3.6e-84 qcov:95.80 identity:50.90;
tigrfam_acc TIGR01727;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name oligo_HPY;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:5.2e-24 score:83.3 best_domain_score:82.6 name:TIGR01727;
43898 43587 CDS
ID metaerg.pl|04312
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481908.1 1 103 evalue:1.5e-37 qcov:100.00 identity:79.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
sp YES;
tm_num 1;
43587 43658 signal_peptide
ID metaerg.pl|04313
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
43898 43587 transmembrane_helix
ID metaerg.pl|04314
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i43599-43667o;
44853 44176 CDS
ID metaerg.pl|04315
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794965.1 1 223 evalue:1.3e-78 qcov:99.10 identity:68.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF17837;
pfam_desc 4'-phosphopantetheinyl transferase N-terminal domain;
pfam_id 4PPT_N;
pfam_target db:Pfam-A.hmm|PF17837.1 evalue:4.2e-20 score:70.9 best_domain_score:68.4 name:4PPT_N;
49328 44850 CDS
ID metaerg.pl|04316
allec_ids 1.-.-.-;
allgo_ids GO:0003824;
allko_ids K01652; K01897; K13356; K01904; K01909; K01895; K05939; K01586; K01779; K01912; K02364; K00992; K03367; K00143; K01776;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794966.1 1 1491 evalue:0.0e+00 qcov:99.90 identity:73.00;
kegg_pathway_id 01053; 00770; 00010; 00310; 00564; 00290; 00660; 00471; 00071; 00360; 00473; 00251; 00252; 00940; 00720; 00640; 00650; 00300; 00620;
kegg_pathway_name Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Glycolysis / Gluconeogenesis; Lysine degradation; Glycerophospholipid metabolism; Valine, leucine and isoleucine biosynthesis; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid metabolism; Phenylalanine metabolism; D-Alanine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Phenylpropanoid biosynthesis; Reductive carboxylate cycle (CO2 fixation); Propanoate metabolism; Butanoate metabolism; Lysine biosynthesis; Pyruvate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PWY-5826; PWY-2821; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987;
metacyc_pathway_name hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;;
pfam_acc PF00501; PF13193; PF00296; PF02911; PF00551; PF00550;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain; Luciferase-like monooxygenase; Formyl transferase, C-terminal domain; Formyl transferase; Phosphopantetheine attachment site;
pfam_id AMP-binding; AMP-binding_C; Bac_luciferase; Formyl_trans_C; Formyl_trans_N; PP-binding;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:3.1e-98 score:328.4 best_domain_score:181.3 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:6.2e-10 score:39.2 best_domain_score:37.8 name:AMP-binding_C; db:Pfam-A.hmm|PF00296.20 evalue:5.2e-45 score:153.5 best_domain_score:153.5 name:Bac_luciferase; db:Pfam-A.hmm|PF02911.18 evalue:9.8e-07 score:28.2 best_domain_score:27.0 name:Formyl_trans_C; db:Pfam-A.hmm|PF00551.19 evalue:4.1e-15 score:55.2 best_domain_score:54.5 name:Formyl_trans_N; db:Pfam-A.hmm|PF00550.25 evalue:1.7e-12 score:46.7 best_domain_score:45.3 name:PP-binding;
tigrfam_acc TIGR01733; TIGR04020;
tigrfam_desc amino acid adenylation domain; natural product biosynthesis luciferase-like monooxygenase domain;
tigrfam_name AA-adenyl-dom; seco_metab_LLM;
tigrfam_target db:TIGRFAMs.hmm|TIGR01733 evalue:5.1e-125 score:416.6 best_domain_score:219.8 name:TIGR01733; db:TIGRFAMs.hmm|TIGR04020 evalue:1.2e-140 score:467.6 best_domain_score:466.7 name:TIGR04020;
50324 49332 CDS
ID metaerg.pl|04317
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794967.1 1 330 evalue:4.1e-126 qcov:100.00 identity:67.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00535; PF13641; PF13632;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family group 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:3.4e-10 score:39.2 best_domain_score:38.2 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:4.4e-14 score:52.1 best_domain_score:51.3 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13632.6 evalue:2.8e-08 score:33.2 best_domain_score:32.0 name:Glyco_trans_2_3;
56629 50321 CDS
ID metaerg.pl|04318
allgo_ids GO:0009058; GO:0016788;
allko_ids K01776; K03367; K00143; K00992; K02364; K01779; K01652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794968.1 1 2102 evalue:0.0e+00 qcov:100.00 identity:76.30;
kegg_pathway_id 01053; 00770; 00310; 00290; 00660; 00650; 00471; 00300; 00473; 00251; 00252;
kegg_pathway_name Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Lysine degradation; Valine, leucine and isoleucine biosynthesis; C5-Branched dibasic acid metabolism; Butanoate metabolism; D-Glutamine and D-glutamate metabolism; Lysine biosynthesis; D-Alanine metabolism; Glutamate metabolism; Alanine and aspartate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00698; PF00106; PF16197; PF00109; PF02801; PF08659; PF00550; PF14765; PF00975;
pfam_desc Acyl transferase domain; short chain dehydrogenase; Ketoacyl-synthetase C-terminal extension; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; KR domain; Phosphopantetheine attachment site; Polyketide synthase dehydratase; Thioesterase domain;
pfam_id Acyl_transf_1; adh_short; KAsynt_C_assoc; ketoacyl-synt; Ketoacyl-synt_C; KR; PP-binding; PS-DH; Thioesterase;
pfam_target db:Pfam-A.hmm|PF00698.21 evalue:4.7e-40 score:137.3 best_domain_score:136.6 name:Acyl_transf_1; db:Pfam-A.hmm|PF00106.25 evalue:2.4e-07 score:29.6 best_domain_score:21.3 name:adh_short; db:Pfam-A.hmm|PF16197.5 evalue:2.8e-19 score:68.9 best_domain_score:67.9 name:KAsynt_C_assoc; db:Pfam-A.hmm|PF00109.26 evalue:3.4e-70 score:235.7 best_domain_score:234.9 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:4.6e-40 score:135.6 best_domain_score:134.5 name:Ketoacyl-synt_C; db:Pfam-A.hmm|PF08659.10 evalue:2.3e-44 score:150.7 best_domain_score:149.7 name:KR; db:Pfam-A.hmm|PF00550.25 evalue:2.8e-16 score:58.8 best_domain_score:57.3 name:PP-binding; db:Pfam-A.hmm|PF14765.6 evalue:5.3e-40 score:136.7 best_domain_score:135.3 name:PS-DH; db:Pfam-A.hmm|PF00975.20 evalue:2.3e-21 score:76.2 best_domain_score:73.7 name:Thioesterase;
tm_num 1;
56629 50321 transmembrane_helix
ID metaerg.pl|04319
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i50339-50398o;
58116 56626 CDS
ID metaerg.pl|04320
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794969.1 1 489 evalue:1.3e-200 qcov:98.60 identity:73.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
tm_num 9;
58116 56626 transmembrane_helix
ID metaerg.pl|04321
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology o56635-56688i56707-56760o56803-56856i56875-56934o57031-57099i57118-57186o57271-57339i57376-57444o57778-57846i;
59415 58135 CDS
ID metaerg.pl|04322
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794970.1 1 421 evalue:8.8e-129 qcov:98.80 identity:61.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
tm_num 3;
59415 58135 transmembrane_helix
ID metaerg.pl|04323
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i58192-58260o59170-59238i59350-59403o;
60324 59449 CDS
ID metaerg.pl|04324
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794971.1 1 291 evalue:6.5e-83 qcov:100.00 identity:59.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
61115 60510 CDS
ID metaerg.pl|04325
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794972.1 1 201 evalue:2.3e-95 qcov:100.00 identity:84.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF03548;
pfam_desc Outer membrane lipoprotein carrier protein LolA;
pfam_id LolA;
pfam_target db:Pfam-A.hmm|PF03548.15 evalue:2.9e-29 score:101.1 best_domain_score:100.9 name:LolA;
sp YES;
60510 60578 signal_peptide
ID metaerg.pl|04326
Note TAT;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
61466 62443 CDS
ID metaerg.pl|04327
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795842.1 1 325 evalue:6.4e-172 qcov:100.00 identity:91.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF16868;
pfam_desc NMT1-like family;
pfam_id NMT1_3;
pfam_target db:Pfam-A.hmm|PF16868.5 evalue:6.3e-83 score:277.7 best_domain_score:277.6 name:NMT1_3;
sp YES;
tigrfam_acc TIGR02122;
tigrfam_desc TRAP transporter solute receptor, TAXI family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TRAP_TAXI;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR02122 evalue:1.6e-63 score:213.7 best_domain_score:213.5 name:TIGR02122;
61466 61531 signal_peptide
ID metaerg.pl|04328
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
62576 64777 CDS
ID metaerg.pl|04329
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796064.1 1 726 evalue:0.0e+00 qcov:99.00 identity:91.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:3.9e-82 score:275.5 best_domain_score:275.5 name:DctM;
tigrfam_acc TIGR02123;
tigrfam_desc TRAP transporter, 4TM/12TM fusion protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TRAP_fused;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR02123 evalue:5.2e-189 score:629.0 best_domain_score:623.2 name:TIGR02123;
tm_num 15;
62576 64777 transmembrane_helix
ID metaerg.pl|04330
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology o62666-62734i62816-62875o62918-62986i63023-63091o63119-63178i63278-63346o63416-63484i63791-63850o63914-63982i64100-64168o64226-64294i64355-64423o64466-64519i64556-64624o64667-64735i;
66509 64941 CDS
ID metaerg.pl|04331
allgo_ids GO:0008168; GO:0015948;
allko_ids K14083;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795841.1 6 522 evalue:2.8e-278 qcov:99.00 identity:93.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF06253;
pfam_desc Trimethylamine methyltransferase (MTTB);
pfam_id MTTB;
pfam_target db:Pfam-A.hmm|PF06253.11 evalue:2.6e-227 score:754.0 best_domain_score:753.7 name:MTTB;
66768 67817 CDS
ID metaerg.pl|04332
allec_ids 2.5.1.72;
allgo_ids GO:0008987; GO:0009435; GO:0051539; GO:0005737; GO:0046872;
allko_ids K03517;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795840.1 1 348 evalue:9.3e-185 qcov:99.70 identity:93.40;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PYRIDNUCSYN-PWY; PWY0-781;
metacyc_pathway_name NAD de novo biosynthesis I (from aspartate);; aspartate superpathway;;
metacyc_pathway_type NAD-SYN;; Super-Pathways;;
pfam_acc PF02445;
pfam_desc Quinolinate synthetase A protein;
pfam_id NadA;
pfam_target db:Pfam-A.hmm|PF02445.16 evalue:8.9e-113 score:375.6 best_domain_score:375.4 name:NadA;
sprot_desc Quinolinate synthase A;
sprot_id sp|A6U7C5|NADA_SINMW;
sprot_target db:uniprot_sprot|sp|A6U7C5|NADA_SINMW 6 344 evalue:1.3e-108 qcov:97.10 identity:54.90;
tigrfam_acc TIGR00550;
tigrfam_desc quinolinate synthetase complex, A subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name nadA;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00550 evalue:6.4e-96 score:320.3 best_domain_score:320.0 name:TIGR00550;
67822 69378 CDS
ID metaerg.pl|04333
allec_ids 1.4.3.16;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0008734; GO:0044318; GO:0009435;
allko_ids K00234; K00244; K00278; K00394; K00239;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795839.1 1 518 evalue:2.0e-223 qcov:100.00 identity:80.90;
kegg_pathway_id 00720; 00920; 00632; 00020; 00252; 00450; 02020; 00760; 05012; 00190; 00650;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Sulfur metabolism; Benzoate degradation via CoA ligation; Citrate cycle (TCA cycle); Alanine and aspartate metabolism; Selenoamino acid metabolism; Two-component system - General; Nicotinate and nicotinamide metabolism; Parkinson's disease; Oxidative phosphorylation; Butanoate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PWY0-781; PYRIDNUCSYN-PWY;
metacyc_pathway_name aspartate superpathway;; NAD de novo biosynthesis I (from aspartate);;
metacyc_pathway_type Super-Pathways;; NAD-SYN;;
pfam_acc PF00890; PF02910;
pfam_desc FAD binding domain; Fumarate reductase flavoprotein C-term;
pfam_id FAD_binding_2; Succ_DH_flav_C;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:4.3e-73 score:246.0 best_domain_score:246.0 name:FAD_binding_2; db:Pfam-A.hmm|PF02910.20 evalue:8.7e-15 score:54.1 best_domain_score:35.1 name:Succ_DH_flav_C;
sp YES;
sprot_desc L-aspartate oxidase;
sprot_id sp|Q92R32|NADB_RHIME;
sprot_target db:uniprot_sprot|sp|Q92R32|NADB_RHIME 5 518 evalue:1.4e-127 qcov:99.20 identity:52.00;
tm_num 1;
67822 67911 signal_peptide
ID metaerg.pl|04334
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
67822 69378 transmembrane_helix
ID metaerg.pl|04335
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i67840-67908o;
69375 70223 CDS
ID metaerg.pl|04336
allec_ids 2.4.2.19;
allgo_ids GO:0004514; GO:0009435;
allko_ids K03813;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795838.1 1 282 evalue:2.5e-119 qcov:100.00 identity:85.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PYRIDNUCSYN-PWY; PWY-3502; NADSYN-PWY; PWY0-781; PWY-5653;
metacyc_pathway_name NAD de novo biosynthesis I (from aspartate);; superpathway of NAD biosynthesis in eukaryotes;; NAD de novo biosynthesis II (from tryptophan);; aspartate superpathway;; NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde;;
metacyc_pathway_type NAD-SYN;; NAD-SYN; Super-Pathways;; NAD-SYN; Super-Pathways;; Super-Pathways;; NAD-SYN;;
pfam_acc PF01729; PF02749;
pfam_desc Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain;
pfam_id QRPTase_C; QRPTase_N;
pfam_target db:Pfam-A.hmm|PF01729.19 evalue:1e-57 score:193.8 best_domain_score:193.2 name:QRPTase_C; db:Pfam-A.hmm|PF02749.16 evalue:1.3e-27 score:94.9 best_domain_score:93.7 name:QRPTase_N;
sprot_desc Probable nicotinate-nucleotide pyrophosphorylase [carboxylating];
sprot_id sp|P77938|NADC_RHORU;
sprot_target db:uniprot_sprot|sp|P77938|NADC_RHORU 4 281 evalue:8.9e-76 qcov:98.60 identity:59.40;
tigrfam_acc TIGR00078;
tigrfam_desc nicotinate-nucleotide diphosphorylase (carboxylating);
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name nadC;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00078 evalue:3.2e-96 score:320.8 best_domain_score:320.7 name:TIGR00078;
70348 71007 CDS
ID metaerg.pl|04337
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084635010.1 1 216 evalue:1.9e-90 qcov:98.60 identity:72.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF06226;
pfam_desc Protein of unknown function (DUF1007);
pfam_id DUF1007;
pfam_target db:Pfam-A.hmm|PF06226.13 evalue:7.4e-42 score:142.9 best_domain_score:142.7 name:DUF1007;
sp YES;
70348 70413 signal_peptide
ID metaerg.pl|04338
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
70992 71894 CDS
ID metaerg.pl|04339
allgo_ids GO:0015099; GO:0016021; GO:0035444; GO:0046872; GO:0005886; GO:0046583; GO:0006824; GO:0035784; GO:0032025; GO:0010045;
allko_ids K08970;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795836.1 1 300 evalue:1.9e-109 qcov:100.00 identity:70.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF03824;
pfam_desc High-affinity nickel-transport protein;
pfam_id NicO;
pfam_target db:Pfam-A.hmm|PF03824.16 evalue:1.1e-25 score:89.8 best_domain_score:60.7 name:NicO;
sp YES;
sprot_desc Putative nickel/cobalt efflux system HI_1248;
sprot_id sp|P44136|Y1248_HAEIN;
sprot_target db:uniprot_sprot|sp|P44136|Y1248_HAEIN 1 297 evalue:1.7e-16 qcov:99.00 identity:28.70;
tm_num 7;
70992 71093 signal_peptide
ID metaerg.pl|04340
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
70992 71894 transmembrane_helix
ID metaerg.pl|04341
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i71010-71063o71157-71225i71286-71354o71397-71456i71604-71672o71700-71768i71805-71873o;
71936 73312 CDS
ID metaerg.pl|04342
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0042910; GO:0006811;
allko_ids K03327;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795835.1 9 457 evalue:1.4e-212 qcov:98.00 identity:87.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF01554;
pfam_desc MatE;
pfam_id MatE;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:2.1e-50 score:169.7 best_domain_score:93.3 name:MatE;
sprot_desc Probable multidrug resistance protein NorM;
sprot_id sp|Q92PZ0|NORM_RHIME;
sprot_target db:uniprot_sprot|sp|Q92PZ0|NORM_RHIME 10 457 evalue:1.3e-92 qcov:97.80 identity:42.00;
tigrfam_acc TIGR00797;
tigrfam_desc MATE efflux family protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name matE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00797 evalue:1.9e-66 score:223.7 best_domain_score:223.4 name:TIGR00797;
tm_num 12;
71936 73312 transmembrane_helix
ID metaerg.pl|04343
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i71969-72037o72080-72148i72221-72289o72332-72400i72419-72487o72530-72598i72659-72727o72770-72838i72896-72964o72992-73060i73121-73189o73202-73270i;
73322 74188 CDS
ID metaerg.pl|04344
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795834.1 1 288 evalue:8.6e-128 qcov:100.00 identity:85.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.3e-34 score:118.6 best_domain_score:80.7 name:EamA;
sp YES;
tm_num 10;
73322 73390 signal_peptide
ID metaerg.pl|04345
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
73322 74188 transmembrane_helix
ID metaerg.pl|04346
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i73334-73402o73418-73486i73523-73582o73595-73663i73682-73750o73763-73831i73850-73918o73946-74014i74051-74104o74114-74167i;
74381 75949 CDS
ID metaerg.pl|04347
allko_ids K12997; K00698;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657465.1 8 520 evalue:7.2e-165 qcov:98.30 identity:58.30;
kegg_pathway_id 00530;
kegg_pathway_name Aminosugars metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00535; PF13641;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:3.7e-18 score:65.1 best_domain_score:64.4 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:1.1e-11 score:44.3 best_domain_score:43.5 name:Glyco_tranf_2_3;
76010 76789 CDS
ID metaerg.pl|04348
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795815.1 6 259 evalue:2.9e-66 qcov:98.10 identity:53.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
76786 77586 CDS
ID metaerg.pl|04349
allgo_ids GO:0008146;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468262.1 1 262 evalue:3.2e-113 qcov:98.50 identity:75.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00685; PF13469;
pfam_desc Sulfotransferase domain; Sulfotransferase family;
pfam_id Sulfotransfer_1; Sulfotransfer_3;
pfam_target db:Pfam-A.hmm|PF00685.27 evalue:1.6e-15 score:56.6 best_domain_score:55.9 name:Sulfotransfer_1; db:Pfam-A.hmm|PF13469.6 evalue:6.3e-19 score:68.4 best_domain_score:48.7 name:Sulfotransfer_3;
77602 79854 CDS
ID metaerg.pl|04350
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795813.1 5 750 evalue:3.2e-214 qcov:99.50 identity:59.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF04488;
pfam_desc Glycosyltransferase sugar-binding region containing DXD motif;
pfam_id Gly_transf_sug;
pfam_target db:Pfam-A.hmm|PF04488.15 evalue:2.9e-05 score:23.9 best_domain_score:22.6 name:Gly_transf_sug;
80024 81472 CDS
ID metaerg.pl|04351
allgo_ids GO:0015562; GO:0055085; GO:0016021; GO:0005886; GO:0009877;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__XJSP;s__XJSP sp002900965;
genomedb_acc GCF_002900965.1;
genomedb_target db:genomedb|GCF_002900965.1|WP_103336481.1 15 481 evalue:3.8e-112 qcov:96.90 identity:53.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF02321;
pfam_desc Outer membrane efflux protein;
pfam_id OEP;
pfam_target db:Pfam-A.hmm|PF02321.18 evalue:2.5e-31 score:108.2 best_domain_score:72.3 name:OEP;
sp YES;
sprot_desc Nodulation protein T;
sprot_id sp|P15727|NODT_RHILV;
sprot_target db:uniprot_sprot|sp|P15727|NODT_RHILV 74 478 evalue:1.8e-23 qcov:84.00 identity:29.00;
80024 80143 lipoprotein_signal_peptide
ID metaerg.pl|04352
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
81661 83313 CDS
ID metaerg.pl|04353
allko_ids K02364; K00992;
kegg_pathway_id 01053;
kegg_pathway_name Biosynthesis of siderophore group nonribosomal peptides;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00668;
pfam_desc Condensation domain;
pfam_id Condensation;
pfam_target db:Pfam-A.hmm|PF00668.20 evalue:4.7e-11 score:41.3 best_domain_score:40.6 name:Condensation;
83485 84537 CDS
ID metaerg.pl|04354
allko_ids K00658;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Marivita;s__Marivita hallyeonensis;
genomedb_acc GCF_900129875.1;
genomedb_target db:genomedb|GCF_900129875.1|WP_072779578.1 7 348 evalue:2.6e-46 qcov:97.70 identity:34.30;
kegg_pathway_id 00020; 00310;
kegg_pathway_name Citrate cycle (TCA cycle); Lysine degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00364; PF13533; PF13437; PF16576;
pfam_desc Biotin-requiring enzyme; Biotin-lipoyl like; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl; Biotin_lipoyl_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:1.1e-07 score:30.8 best_domain_score:15.9 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:7.1e-11 score:41.0 best_domain_score:26.9 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:7.6e-08 score:32.3 best_domain_score:18.6 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:3.5e-08 score:32.2 best_domain_score:28.9 name:HlyD_D23;
sp YES;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:2.3e-40 score:137.7 best_domain_score:137.2 name:TIGR01730;
83485 83553 signal_peptide
ID metaerg.pl|04355
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
84541 87768 CDS
ID metaerg.pl|04356
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886;
allko_ids K18138;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudoruegeria_B;s__Pseudoruegeria_B marinistellae;
genomedb_acc GCF_001509585.1;
genomedb_target db:genomedb|GCF_001509585.1|WP_068114800.1 7 1040 evalue:2.5e-249 qcov:96.20 identity:48.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00873; PF02355;
pfam_desc AcrB/AcrD/AcrF family; Protein export membrane protein;
pfam_id ACR_tran; SecD_SecF;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:7.7e-115 score:383.9 best_domain_score:383.6 name:ACR_tran; db:Pfam-A.hmm|PF02355.16 evalue:3.2e-09 score:35.7 best_domain_score:26.4 name:SecD_SecF;
sprot_desc Uncharacterized transporter HI_0895;
sprot_id sp|Q57124|Y895_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57124|Y895_HAEIN 3 986 evalue:1.5e-27 qcov:91.50 identity:20.30;
tm_num 11;
84541 87768 transmembrane_helix
ID metaerg.pl|04357
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology o84568-84636i85585-85653o85696-85764i85837-85905o85948-86016i86095-86163o87127-87195i87214-87282o87310-87378i87439-87507o87517-87585i;
88602 87841 CDS
ID metaerg.pl|04358
allec_ids 2.4.-.-;
allgo_ids GO:0016757; GO:0071555; GO:0050845;
allko_ids K00698; K12997; K12987; K12983; K00694; K00729; K12992; K00710; K00721; K16698;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter_A;s__Gemmobacter_A megaterium;
genomedb_acc GCF_900156815.1;
genomedb_target db:genomedb|GCF_900156815.1|WP_076533927.1 5 250 evalue:1.7e-55 qcov:97.20 identity:52.20;
kegg_pathway_id 01030; 00530; 00500; 00510;
kegg_pathway_name Glycan structures - biosynthesis 1; Aminosugars metabolism; Starch and sucrose metabolism; N-Glycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id LIPA-CORESYN-PWY; LPSSYN-PWY;
metacyc_pathway_name lipid A-core biosynthesis (E. coli K-12);; superpathway of lipopolysaccharide biosynthesis;;
metacyc_pathway_type Glycan-Biosynthesis; Lipid-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;;
pfam_acc PF00535; PF10111; PF13641; PF13704;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyltransferase like family 2; Glycosyl transferase family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_2; Glyco_tranf_2_3; Glyco_tranf_2_4;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.1e-30 score:105.9 best_domain_score:105.4 name:Glycos_transf_2; db:Pfam-A.hmm|PF10111.9 evalue:2.1e-11 score:43.1 best_domain_score:42.5 name:Glyco_tranf_2_2; db:Pfam-A.hmm|PF13641.6 evalue:6.1e-15 score:55.0 best_domain_score:50.5 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13704.6 evalue:4.4e-07 score:29.6 best_domain_score:28.8 name:Glyco_tranf_2_4;
sprot_desc Putative teichuronic acid biosynthesis glycosyltransferase TuaG;
sprot_id sp|O32268|TUAG_BACSU;
sprot_target db:uniprot_sprot|sp|O32268|TUAG_BACSU 5 250 evalue:8.1e-36 qcov:97.20 identity:37.30;
90259 88691 CDS
ID metaerg.pl|04359
allec_ids 6.5.1.1;
allgo_ids GO:0003910; GO:0006281; GO:0006310; GO:0005524; GO:0003677; GO:0046872; GO:0007049; GO:0051301; GO:0071897; GO:0051103; GO:0006260;
allko_ids K10747;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468655.1 1 521 evalue:1.3e-238 qcov:99.80 identity:79.80;
kegg_pathway_id 03430; 03420; 03030; 03410;
kegg_pathway_name Mismatch repair; Nucleotide excision repair; DNA replication; Base excision repair;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF04679; PF01068;
pfam_desc ATP dependent DNA ligase C terminal region ; ATP dependent DNA ligase domain;
pfam_id DNA_ligase_A_C; DNA_ligase_A_M;
pfam_target db:Pfam-A.hmm|PF04679.15 evalue:6.6e-17 score:61.2 best_domain_score:60.1 name:DNA_ligase_A_C; db:Pfam-A.hmm|PF01068.21 evalue:1.9e-29 score:102.0 best_domain_score:101.6 name:DNA_ligase_A_M;
sprot_desc Probable DNA ligase;
sprot_id sp|A7HID3|DNLI_ANADF;
sprot_target db:uniprot_sprot|sp|A7HID3|DNLI_ANADF 78 518 evalue:1.4e-45 qcov:84.50 identity:34.60;
tigrfam_acc TIGR04120;
tigrfam_desc DNA ligase, ATP-dependent, PP_1105 family;
tigrfam_name DNA_lig_bact;
tigrfam_target db:TIGRFAMs.hmm|TIGR04120 evalue:9.8e-242 score:802.7 best_domain_score:802.6 name:TIGR04120;
91257 90256 CDS
ID metaerg.pl|04360
allec_ids 6.5.1.1;
allgo_ids GO:0005524; GO:0003677; GO:0003910; GO:0046872; GO:0007049; GO:0051301; GO:0071897; GO:0051103; GO:0006310; GO:0006260;
allko_ids K10747;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481785.1 4 333 evalue:3.7e-167 qcov:99.10 identity:85.20;
kegg_pathway_id 03410; 03030; 03420; 03430;
kegg_pathway_name Base excision repair; DNA replication; Nucleotide excision repair; Mismatch repair;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
sprot_desc Probable DNA ligase;
sprot_id sp|B1ZZL9|DNLI_OPITP;
sprot_target db:uniprot_sprot|sp|B1ZZL9|DNLI_OPITP 12 304 evalue:2.1e-23 qcov:88.00 identity:27.50;
tigrfam_acc TIGR04122;
tigrfam_desc putative exonuclease, DNA ligase-associated;
tigrfam_name Xnuc_lig_assoc;
tigrfam_target db:TIGRFAMs.hmm|TIGR04122 evalue:2.6e-137 score:456.1 best_domain_score:456.0 name:TIGR04122;
92306 91383 CDS
ID metaerg.pl|04361
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799359.1 5 303 evalue:4.5e-58 qcov:97.40 identity:42.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
sp YES;
tm_num 1;
91383 91478 signal_peptide
ID metaerg.pl|04362
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
92306 91383 transmembrane_helix
ID metaerg.pl|04363
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology i91419-91478o;
95097 92407 CDS
ID metaerg.pl|04364
allgo_ids GO:0005524; GO:0016020; GO:0017038; GO:0005737; GO:0005886; GO:0046872; GO:0065002; GO:0006605;
allko_ids K03070;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799358.1 1 896 evalue:0.0e+00 qcov:100.00 identity:89.00;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF02810; PF07517; PF01043; PF07516;
pfam_desc SEC-C motif; SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain;
pfam_id SEC-C; SecA_DEAD; SecA_PP_bind; SecA_SW;
pfam_target db:Pfam-A.hmm|PF02810.15 evalue:8.4e-11 score:40.8 best_domain_score:40.1 name:SEC-C; db:Pfam-A.hmm|PF07517.14 evalue:3.5e-126 score:419.6 best_domain_score:419.0 name:SecA_DEAD; db:Pfam-A.hmm|PF01043.20 evalue:6.4e-36 score:122.6 best_domain_score:120.8 name:SecA_PP_bind; db:Pfam-A.hmm|PF07516.13 evalue:4.7e-63 score:212.1 best_domain_score:211.3 name:SecA_SW;
sprot_desc hypothetical protein;
sprot_id sp|A4WW84|SECA_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WW84|SECA_RHOS5 1 895 evalue:0.0e+00 qcov:99.90 identity:72.90;
tigrfam_acc TIGR00963;
tigrfam_desc preprotein translocase, SecA subunit;
tigrfam_mainrole Protein fate;
tigrfam_name secA;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00963 evalue:0 score:1063.5 best_domain_score:1063.3 name:TIGR00963;
95318 96175 CDS
ID metaerg.pl|04365
allgo_ids GO:0003755;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799357.1 1 285 evalue:7.7e-121 qcov:100.00 identity:81.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00639; PF13145; PF13616;
pfam_desc PPIC-type PPIASE domain; PPIC-type PPIASE domain; PPIC-type PPIASE domain;
pfam_id Rotamase; Rotamase_2; Rotamase_3;
pfam_target db:Pfam-A.hmm|PF00639.21 evalue:1.9e-19 score:69.6 best_domain_score:67.8 name:Rotamase; db:Pfam-A.hmm|PF13145.6 evalue:1.6e-11 score:44.4 best_domain_score:42.2 name:Rotamase_2; db:Pfam-A.hmm|PF13616.6 evalue:1.4e-19 score:69.9 best_domain_score:69.1 name:Rotamase_3;
sp YES;
95318 95386 signal_peptide
ID metaerg.pl|04366
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
96245 97555 CDS
ID metaerg.pl|04367
allec_ids 2.3.1.35; 2.3.1.1; 2.3.1.35 2.3.1.1;
allgo_ids GO:0004358; GO:0006526; GO:0005737; GO:0004042; GO:0103045;
allko_ids K00620;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657740.1 1 436 evalue:2.9e-188 qcov:100.00 identity:82.00;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PWY-5154; ARGSYN-PWY; GLUTORN-PWY; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY;
metacyc_pathway_name L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);; L-ornithine biosynthesis I;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);;
metacyc_pathway_type ARGININE-SYN;; ARGININE-SYN; Super-Pathways;; L-Ornithine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF01960;
pfam_desc ArgJ family;
pfam_id ArgJ;
pfam_target db:Pfam-A.hmm|PF01960.18 evalue:9.1e-140 score:464.9 best_domain_score:464.6 name:ArgJ;
sp YES;
sprot_desc Arginine biosynthesis bifunctional protein ArgJ;
sprot_id sp|Q5LWL6|ARGJ_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LWL6|ARGJ_RUEPO 29 436 evalue:2.1e-140 qcov:93.60 identity:67.50;
tigrfam_acc TIGR00120;
tigrfam_desc glutamate N-acetyltransferase/amino-acid acetyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ArgJ;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00120 evalue:2.7e-119 score:397.8 best_domain_score:397.4 name:TIGR00120;
96245 96349 signal_peptide
ID metaerg.pl|04368
Note TAT;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
97552 97950 CDS
ID metaerg.pl|04369
allec_ids 3.6.1.65;
allgo_ids GO:0016787; GO:0006281;
allko_ids K03575; K08320; K03574; K08311; K01529; K08310; K01515; K00788; K12944; K03207;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481619.1 1 132 evalue:2.2e-62 qcov:100.00 identity:84.80;
kegg_pathway_id 03410; 00230; 00790; 00730;
kegg_pathway_name Base excision repair; Purine metabolism; Folate biosynthesis; Thiamine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00293; PF14815;
pfam_desc NUDIX domain; NUDIX domain;
pfam_id NUDIX; NUDIX_4;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:1.8e-22 score:79.0 best_domain_score:78.8 name:NUDIX; db:Pfam-A.hmm|PF14815.6 evalue:1.2e-22 score:79.2 best_domain_score:78.9 name:NUDIX_4;
sp YES;
sprot_desc CTP pyrophosphohydrolase;
sprot_id sp|P77788|NUDG_ECOLI;
sprot_target db:uniprot_sprot|sp|P77788|NUDG_ECOLI 1 125 evalue:1.2e-17 qcov:94.70 identity:41.70;
97552 97599 signal_peptide
ID metaerg.pl|04370
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
98494 98300 CDS
ID metaerg.pl|04371
allko_ids K09791;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799355.1 1 64 evalue:1.0e-20 qcov:100.00 identity:79.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF03966;
pfam_desc Trm112p-like protein;
pfam_id Trm112p;
pfam_target db:Pfam-A.hmm|PF03966.16 evalue:3e-06 score:27.0 best_domain_score:26.1 name:Trm112p;
sprot_desc hypothetical protein;
sprot_id sp|Q28VC1|Y424_JANSC;
sprot_target db:uniprot_sprot|sp|Q28VC1|Y424_JANSC 1 64 evalue:1.1e-16 qcov:100.00 identity:65.20;
99123 98491 CDS
ID metaerg.pl|04372
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799354.1 2 210 evalue:1.3e-93 qcov:99.50 identity:82.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF02190;
pfam_desc ATP-dependent protease La (LON) substrate-binding domain;
pfam_id LON_substr_bdg;
pfam_target db:Pfam-A.hmm|PF02190.16 evalue:9.7e-23 score:80.4 best_domain_score:79.3 name:LON_substr_bdg;
100062 99163 CDS
ID metaerg.pl|04373
allgo_ids GO:0045454;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799353.1 1 299 evalue:1.3e-134 qcov:100.00 identity:83.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00085; PF13098; PF13899; PF14559; PF14561;
pfam_desc Thioredoxin; Thioredoxin-like domain; Thioredoxin-like; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id Thioredoxin; Thioredoxin_2; Thioredoxin_7; TPR_19; TPR_20;
pfam_target db:Pfam-A.hmm|PF00085.20 evalue:6.7e-25 score:86.3 best_domain_score:85.6 name:Thioredoxin; db:Pfam-A.hmm|PF13098.6 evalue:6.4e-07 score:29.0 best_domain_score:23.8 name:Thioredoxin_2; db:Pfam-A.hmm|PF13899.6 evalue:6.1e-07 score:28.8 best_domain_score:27.2 name:Thioredoxin_7; db:Pfam-A.hmm|PF14559.6 evalue:1.1e-14 score:53.9 best_domain_score:31.7 name:TPR_19; db:Pfam-A.hmm|PF14561.6 evalue:7.9e-32 score:108.7 best_domain_score:108.7 name:TPR_20;
tigrfam_acc TIGR01068;
tigrfam_desc thioredoxin;
tigrfam_mainrole Energy metabolism;
tigrfam_name thioredoxin;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01068 evalue:7.7e-29 score:99.0 best_domain_score:98.3 name:TIGR01068;
100919 100131 CDS
ID metaerg.pl|04374
allec_ids 3.1.-.-; 3.1.11.2;
allgo_ids GO:0005813; GO:0005737; GO:0005783; GO:0005739; GO:0016607; GO:0005730; GO:0005654; GO:0005634; GO:0048471; GO:0005667; GO:0008408; GO:0031490; GO:0140078; GO:0003684; GO:0003677; GO:0003906; GO:0008311; GO:0008309; GO:0003691; GO:0004521; GO:0046872; GO:0051059; GO:0016491; GO:0004528; GO:0008081; GO:0044877; GO:0003723; GO:0016890; GO:0003713; GO:0007568; GO:0006284; GO:0045454; GO:0071320; GO:0070301; GO:0071375; GO:0080111; GO:0006310; GO:0006281; GO:0014912; GO:1900087; GO:0042981; GO:0043488; GO:0000723; GO:0097698;
allko_ids K01741; K10772; K10771;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481615.1 1 262 evalue:6.4e-146 qcov:100.00 identity:91.20;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF03372;
pfam_desc Endonuclease/Exonuclease/phosphatase family;
pfam_id Exo_endo_phos;
pfam_target db:Pfam-A.hmm|PF03372.23 evalue:1.8e-22 score:79.3 best_domain_score:79.0 name:Exo_endo_phos;
sprot_desc DNA-(apurinic or apyrimidinic site) lyase;
sprot_id sp|P28352|APEX1_MOUSE;
sprot_target db:uniprot_sprot|sp|P28352|APEX1_MOUSE 5 256 evalue:2.8e-15 qcov:96.20 identity:30.00;
tigrfam_acc TIGR00633;
tigrfam_desc exodeoxyribonuclease III (xth);
tigrfam_mainrole DNA metabolism;
tigrfam_name xth;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00633 evalue:1.3e-45 score:155.0 best_domain_score:154.8 name:TIGR00633;
101827 101138 CDS
ID metaerg.pl|04375
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0006355;
allko_ids K07648; K07679; K02478; K07718; K07651; K02575; K07768; K07778; K11354; K07711; K08475; K07639; K07673; K01120; K07641; K07646; K07652; K07682; K07654; K07637; K03407; K11231; K02491; K07708; K07645; K07677; K01937; K08282; K07704; K02484; K00760; K11640; K11356; K11711; K07642; K11527; K02030; K10715; K07678; K02480; K02482; K07636; K07638; K07653; K07716; K02489; K01768; K07710; K03388; K02668; K10916; K08479; K07647; K07675; K07717; K07769; K12767; K11383; K13761; K02486; K10125; K11357; K04757; K07709; K07644; K06379; K07676; K10681; K07670;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469374.1 1 228 evalue:5.1e-123 qcov:99.60 identity:96.10;
kegg_pathway_id 00790; 03090; 02020; 04011; 00240; 00230; 05111; 00983;
kegg_pathway_name Folate biosynthesis; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Drug metabolism - other enzymes;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:3.3e-28 score:97.3 best_domain_score:95.4 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:1.3e-21 score:75.6 best_domain_score:72.5 name:Trans_reg_C;
sprot_desc DNA-binding response regulator MtrA;
sprot_id sp|A0QTK2|MTRA_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QTK2|MTRA_MYCS2 6 225 evalue:2.0e-33 qcov:96.10 identity:37.70;
101990 103075 CDS
ID metaerg.pl|04376
allec_ids 3.5.4.25;
allgo_ids GO:0005525; GO:0003935; GO:0008270; GO:0009231;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799350.1 1 360 evalue:1.7e-149 qcov:99.70 identity:76.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id PWY-6168; RIBOSYN2-PWY;
metacyc_pathway_name flavin biosynthesis III (fungi);; flavin biosynthesis I (bacteria and plants);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00925;
pfam_desc GTP cyclohydrolase II;
pfam_id GTP_cyclohydro2;
pfam_target db:Pfam-A.hmm|PF00925.20 evalue:5.9e-59 score:197.5 best_domain_score:197.0 name:GTP_cyclohydro2;
sprot_desc GTP cyclohydrolase-2;
sprot_id sp|P43525|RIBA_AZOBR;
sprot_target db:uniprot_sprot|sp|P43525|RIBA_AZOBR 11 360 evalue:5.2e-60 qcov:97.00 identity:43.10;
tigrfam_acc TIGR00505;
tigrfam_desc GTP cyclohydrolase II;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribA;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00505 evalue:1.6e-64 score:216.1 best_domain_score:215.7 name:TIGR00505;
103179 103697 CDS
ID metaerg.pl|04377
allgo_ids GO:0016740;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481612.1 8 170 evalue:3.0e-83 qcov:94.80 identity:88.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF03734;
pfam_desc L,D-transpeptidase catalytic domain;
pfam_id YkuD;
pfam_target db:Pfam-A.hmm|PF03734.14 evalue:6e-11 score:42.2 best_domain_score:41.9 name:YkuD;
104442 103795 CDS
ID metaerg.pl|04378
allgo_ids GO:0030170;
allko_ids K06997;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072247258.1 1 215 evalue:6.9e-90 qcov:100.00 identity:76.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF01168;
pfam_desc Alanine racemase, N-terminal domain;
pfam_id Ala_racemase_N;
pfam_target db:Pfam-A.hmm|PF01168.20 evalue:6.3e-21 score:74.3 best_domain_score:74.1 name:Ala_racemase_N;
sprot_desc Pyridoxal phosphate homeostasis protein;
sprot_id sp|P24562|PLPHP_PSEAE;
sprot_target db:uniprot_sprot|sp|P24562|PLPHP_PSEAE 6 214 evalue:1.3e-29 qcov:97.20 identity:41.20;
tigrfam_acc TIGR00044;
tigrfam_desc pyridoxal phosphate enzyme, YggS family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00044;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00044 evalue:1.9e-47 score:160.9 best_domain_score:159.8 name:TIGR00044;
104730 104446 CDS
ID metaerg.pl|04379
allgo_ids GO:0015288; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799347.1 2 93 evalue:1.6e-19 qcov:97.90 identity:53.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF13609;
pfam_desc Gram-negative porin;
pfam_id Porin_4;
pfam_target db:Pfam-A.hmm|PF13609.6 evalue:2.3e-09 score:36.7 best_domain_score:36.5 name:Porin_4;
sp YES;
104446 104499 signal_peptide
ID metaerg.pl|04380
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
105911 105000 CDS
ID metaerg.pl|04381
allgo_ids GO:0015288; GO:0016020; GO:0009279; GO:0046930; GO:0006811;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386191.1 1 303 evalue:2.8e-76 qcov:100.00 identity:57.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF13609;
pfam_desc Gram-negative porin;
pfam_id Porin_4;
pfam_target db:Pfam-A.hmm|PF13609.6 evalue:1.1e-25 score:90.3 best_domain_score:89.8 name:Porin_4;
sp YES;
sprot_desc Porin;
sprot_id sp|P31243|PORI_RHOCA;
sprot_target db:uniprot_sprot|sp|P31243|PORI_RHOCA 21 303 evalue:5.3e-34 qcov:93.40 identity:34.40;
105000 105059 signal_peptide
ID metaerg.pl|04382
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
106167 106679 CDS
ID metaerg.pl|04383
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799345.1 1 170 evalue:7.5e-71 qcov:100.00 identity:81.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
pfam_acc PF12100;
pfam_desc Domain of unknown function (DUF3576);
pfam_id DUF3576;
pfam_target db:Pfam-A.hmm|PF12100.8 evalue:2e-23 score:81.7 best_domain_score:80.8 name:DUF3576;
sp YES;
tm_num 1;
106167 106229 lipoprotein_signal_peptide
ID metaerg.pl|04384
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
106167 106679 transmembrane_helix
ID metaerg.pl|04385
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
topology o106194-106262i;
106763 108535 CDS
ID metaerg.pl|04386
allec_ids 6.1.1.4;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0002161; GO:0004823; GO:0006429;
allko_ids K01869;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481607.1 1 591 evalue:0.0e+00 qcov:100.00 identity:88.30;
kegg_pathway_id 00290; 00970;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 221.14; 0.475177; 220.282; 0.00572947; 0.377831;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00133; PF09334; PF13603;
pfam_desc tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Leucyl-tRNA synthetase, Domain 2;
pfam_id tRNA-synt_1; tRNA-synt_1g; tRNA-synt_1_2;
pfam_target db:Pfam-A.hmm|PF00133.22 evalue:1.2e-51 score:175.0 best_domain_score:140.6 name:tRNA-synt_1; db:Pfam-A.hmm|PF09334.11 evalue:1.2e-19 score:69.6 best_domain_score:59.1 name:tRNA-synt_1g; db:Pfam-A.hmm|PF13603.6 evalue:5.2e-56 score:188.3 best_domain_score:187.7 name:tRNA-synt_1_2;
sprot_desc Leucine--tRNA ligase;
sprot_id sp|Q3IZL4|SYL_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IZL4|SYL_RHOS4 7 591 evalue:2.2e-294 qcov:99.00 identity:79.70;
tigrfam_acc TIGR00396;
tigrfam_desc leucine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name leuS_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00396 evalue:1.7e-228 score:760.0 best_domain_score:759.9 name:TIGR00396;
>Feature NODE_25_length_108364_cov_10.5763
3 1307 CDS
ID metaerg.pl|04387
allko_ids K00658; K01571; K01457; K01941;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195203.1 1 434 evalue:6.4e-135 qcov:100.00 identity:57.40;
kegg_pathway_id 00791; 00310; 00220; 00620; 00330; 00020;
kegg_pathway_name Atrazine degradation; Lysine degradation; Urea cycle and metabolism of amino groups; Pyruvate metabolism; Arginine and proline metabolism; Citrate cycle (TCA cycle);
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00364; PF13533; PF02626;
pfam_desc Biotin-requiring enzyme; Biotin-lipoyl like; Carboxyltransferase domain, subdomain A and B;
pfam_id Biotin_lipoyl; Biotin_lipoyl_2; CT_A_B;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:1.1e-13 score:50.0 best_domain_score:48.0 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:4.1e-07 score:29.0 best_domain_score:17.5 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF02626.15 evalue:4.5e-79 score:265.0 best_domain_score:264.6 name:CT_A_B;
tigrfam_acc TIGR00724;
tigrfam_desc biotin-dependent carboxylase uncharacterized domain;
tigrfam_mainrole Unknown function;
tigrfam_name urea_amlyse_rel;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00724 evalue:1.3e-70 score:237.1 best_domain_score:236.6 name:TIGR00724;
1339 2106 CDS
ID metaerg.pl|04388
allec_ids 3.5.2.9;
allgo_ids GO:0017168; GO:0005524; GO:0005975;
allko_ids K07160;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091486539.1 1 250 evalue:1.0e-111 qcov:98.00 identity:77.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-4041;
metacyc_pathway_name γ-glutamyl cycle;;
metacyc_pathway_type Reductants; Super-Pathways;;
pfam_acc PF03746;
pfam_desc LamB/YcsF family;
pfam_id LamB_YcsF;
pfam_target db:Pfam-A.hmm|PF03746.16 evalue:8.3e-101 score:335.9 best_domain_score:335.7 name:LamB_YcsF;
sprot_desc 5-oxoprolinase subunit A;
sprot_id sp|A6LX30|PXPA_CLOB8;
sprot_target db:uniprot_sprot|sp|A6LX30|PXPA_CLOB8 1 246 evalue:1.7e-81 qcov:96.50 identity:58.90;
2126 2905 CDS
ID metaerg.pl|04389
allec_ids 3.1.-.-;
allgo_ids GO:0009507; GO:0009570; GO:0004521; GO:0046872; GO:0004222; GO:0009658; GO:1901259;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium subtropicum;
genomedb_acc GCF_900112455.1;
genomedb_target db:genomedb|GCF_900112455.1|WP_091529823.1 1 259 evalue:2.7e-120 qcov:100.00 identity:84.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF12710; PF00702; PF08282; PF05116;
pfam_desc haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase;
pfam_id HAD; Hydrolase; Hydrolase_3; S6PP;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:8.3e-07 score:28.8 best_domain_score:13.5 name:HAD; db:Pfam-A.hmm|PF00702.26 evalue:7.7e-07 score:28.8 best_domain_score:27.1 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:3.1e-55 score:186.9 best_domain_score:186.8 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:5.5e-11 score:41.7 best_domain_score:36.9 name:S6PP;
sprot_desc Endoribonuclease YBEY, chloroplastic;
sprot_id sp|Q8L5Z4|YBEY_ARATH;
sprot_target db:uniprot_sprot|sp|Q8L5Z4|YBEY_ARATH 7 255 evalue:1.2e-15 qcov:96.10 identity:26.50;
tigrfam_acc TIGR00099; TIGR01484;
tigrfam_desc Cof-like hydrolase; HAD hydrolase, family IIB;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name Cof-subfamily; HAD-SF-IIB;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00099 evalue:1.9e-53 score:180.8 best_domain_score:180.7 name:TIGR00099; db:TIGRFAMs.hmm|TIGR01484 evalue:8.5e-24 score:84.0 best_domain_score:83.7 name:TIGR01484;
2980 3477 CDS
ID metaerg.pl|04390
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195194.1 1 162 evalue:4.9e-67 qcov:98.20 identity:79.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF04307;
pfam_desc LexA-binding, inner membrane-associated putative hydrolase;
pfam_id YdjM;
pfam_target db:Pfam-A.hmm|PF04307.14 evalue:5.3e-30 score:103.2 best_domain_score:103.0 name:YdjM;
sp YES;
tm_num 3;
2980 3072 signal_peptide
ID metaerg.pl|04391
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
2980 3477 transmembrane_helix
ID metaerg.pl|04392
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i2998-3093o3151-3219i3403-3471o;
3978 3631 CDS
ID metaerg.pl|04393
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195191.1 1 115 evalue:3.8e-42 qcov:100.00 identity:75.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
4413 5639 CDS
ID metaerg.pl|04394
allec_ids 3.5.1.-;
allgo_ids GO:0016787; GO:0046872;
allko_ids K01451;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195188.1 1 408 evalue:7.7e-223 qcov:100.00 identity:92.20;
kegg_pathway_id 00360;
kegg_pathway_name Phenylalanine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5784; LYSDEGII-PWY; PWY-5327; PWY-1822; PWY-0; PWY-6548;
metacyc_pathway_name indole-3-acetate inactivation VIII;; L-lysine degradation III;; superpathway of L-lysine degradation;; indole-3-acetate activation I;; putrescine degradation III;; ;
metacyc_pathway_type Indole-3-Acetate-Inactivation;; LYSINE-DEG;; LYSINE-DEG; Super-Pathways;; Activation;; Putrescine-Degradation;; ;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:6.5e-08 score:31.7 best_domain_score:30.6 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:6.2e-30 score:103.7 best_domain_score:103.0 name:Peptidase_M20;
sprot_desc Putative amidohydrolase YhaA;
sprot_id sp|O07598|YHAA_BACSU;
sprot_target db:uniprot_sprot|sp|O07598|YHAA_BACSU 1 382 evalue:8.6e-96 qcov:93.60 identity:48.20;
tigrfam_acc TIGR01891;
tigrfam_desc amidohydrolase;
tigrfam_mainrole Protein fate;
tigrfam_name amidohydrolases;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01891 evalue:3.2e-115 score:384.3 best_domain_score:384.1 name:TIGR01891;
5659 6846 CDS
ID metaerg.pl|04395
allec_ids 3.5.1.-;
allgo_ids GO:0016787; GO:0046872;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195185.1 1 395 evalue:1.7e-214 qcov:100.00 identity:93.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-6548; PWY-0; PWY-1822; PWY-5327; LYSDEGII-PWY; PWY-5784;
metacyc_pathway_name ; putrescine degradation III;; indole-3-acetate activation I;; superpathway of L-lysine degradation;; L-lysine degradation III;; indole-3-acetate inactivation VIII;;
metacyc_pathway_type ; Putrescine-Degradation;; Activation;; LYSINE-DEG; Super-Pathways;; LYSINE-DEG;; Indole-3-Acetate-Inactivation;;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:3.6e-10 score:38.9 best_domain_score:38.1 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:2.1e-30 score:105.2 best_domain_score:104.9 name:Peptidase_M20;
sprot_desc Putative amidohydrolase YhaA;
sprot_id sp|O07598|YHAA_BACSU;
sprot_target db:uniprot_sprot|sp|O07598|YHAA_BACSU 8 394 evalue:3.6e-91 qcov:98.00 identity:43.40;
tigrfam_acc TIGR01891;
tigrfam_desc amidohydrolase;
tigrfam_mainrole Protein fate;
tigrfam_name amidohydrolases;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01891 evalue:1.5e-113 score:378.8 best_domain_score:378.6 name:TIGR01891;
6884 7834 CDS
ID metaerg.pl|04396
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0030420; GO:0015031; GO:0030435;
allko_ids K13890; K02033; K13894;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195182.1 1 316 evalue:7.6e-170 qcov:100.00 identity:98.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:2.8e-40 score:137.2 best_domain_score:137.2 name:BPD_transp_1;
sp YES;
sprot_desc Oligopeptide transport system permease protein AppB;
sprot_id sp|P42062|APPB_BACSU;
sprot_target db:uniprot_sprot|sp|P42062|APPB_BACSU 1 315 evalue:2.9e-75 qcov:99.70 identity:46.20;
tm_num 5;
6884 6979 signal_peptide
ID metaerg.pl|04397
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
6884 7834 transmembrane_helix
ID metaerg.pl|04398
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i6908-6976o7175-7243i7280-7348o7406-7474i7733-7801o;
7851 8804 CDS
ID metaerg.pl|04399
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0030420; GO:0015031; GO:0030435;
allko_ids K02034; K02033;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195234.1 13 317 evalue:2.2e-161 qcov:96.20 identity:97.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00528; PF12911;
pfam_desc Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C;
pfam_id BPD_transp_1; OppC_N;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:6.3e-30 score:103.5 best_domain_score:102.2 name:BPD_transp_1; db:Pfam-A.hmm|PF12911.7 evalue:1.6e-13 score:49.6 best_domain_score:49.6 name:OppC_N;
sprot_desc Oligopeptide transport system permease protein AppC;
sprot_id sp|P42063|APPC_BACSU;
sprot_target db:uniprot_sprot|sp|P42063|APPC_BACSU 31 312 evalue:3.7e-54 qcov:89.00 identity:38.70;
tm_num 6;
7851 8804 transmembrane_helix
ID metaerg.pl|04400
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i8007-8075o8217-8285i8346-8414o8472-8531i8550-8618o8700-8759i;
8938 10626 CDS
ID metaerg.pl|04401
allgo_ids GO:0043190; GO:0030288; GO:1904680; GO:0042938;
allko_ids K02035; K13889;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195179.1 1 562 evalue:1.5e-301 qcov:100.00 identity:90.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:5.6e-68 score:228.8 best_domain_score:228.3 name:SBP_bac_5;
sp YES;
sprot_desc Glutathione-binding protein GsiB;
sprot_id sp|Q8ZQM3|GSIB_SALTY;
sprot_target db:uniprot_sprot|sp|Q8ZQM3|GSIB_SALTY 113 540 evalue:2.3e-14 qcov:76.20 identity:21.40;
8938 9006 lipoprotein_signal_peptide
ID metaerg.pl|04402
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
10744 11838 CDS
ID metaerg.pl|04403
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0022857; GO:0030420; GO:0015031; GO:0030435; GO:0055085;
allko_ids K02071; K06861; K01996; K02045; K11072; K02010; K05847; K12371; K02006; K02052; K13896; K02032; K02034; K02017; K02023; K02000; K01995; K02049; K02031; K10111; K05816; K15583;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195173.1 1 364 evalue:5.7e-193 qcov:100.00 identity:95.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF13304; PF00005; PF08352;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id AAA_21; ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.8e-08 score:33.8 best_domain_score:27.9 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.6e-31 score:108.2 best_domain_score:107.7 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:6.4e-14 score:51.5 best_domain_score:48.5 name:oligo_HPY;
sprot_desc Oligopeptide transport ATP-binding protein OppD;
sprot_id sp|P24136|OPPD_BACSU;
sprot_target db:uniprot_sprot|sp|P24136|OPPD_BACSU 6 341 evalue:4.0e-129 qcov:92.30 identity:67.70;
tigrfam_acc TIGR01727;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name oligo_HPY;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:2.5e-18 score:65.1 best_domain_score:64.4 name:TIGR01727;
11822 12802 CDS
ID metaerg.pl|04404
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0030420; GO:0015031; GO:0030435;
allko_ids K02000; K10243; K12372; K02023; K05816; K01995; K02049; K02031; K10112; K10111; K02045; K11072; K01996; K06861; K02071; K13896; K02017; K02032; K05847; K02010; K02052; K02006; K10823;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195168.1 1 326 evalue:2.6e-173 qcov:100.00 identity:95.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.6e-31 score:108.9 best_domain_score:108.4 name:ABC_tran;
sprot_desc Oligopeptide transport ATP-binding protein OppF;
sprot_id sp|P24137|OPPF_BACSU;
sprot_target db:uniprot_sprot|sp|P24137|OPPF_BACSU 11 303 evalue:8.1e-97 qcov:89.90 identity:60.40;
12879 14249 CDS
ID metaerg.pl|04405
allec_ids 3.4.13.18;
allgo_ids GO:0016787; GO:0005737; GO:0103046; GO:0004180; GO:0102008; GO:0046872; GO:0008237;
allko_ids K08660;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195165.1 1 456 evalue:2.3e-239 qcov:100.00 identity:87.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:1.3e-20 score:72.6 best_domain_score:71.4 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:1.4e-36 score:125.4 best_domain_score:125.0 name:Peptidase_M20;
sprot_desc Cytosolic non-specific dipeptidase;
sprot_id sp|Q5R432|CNDP2_PONAB;
sprot_target db:uniprot_sprot|sp|Q5R432|CNDP2_PONAB 17 450 evalue:1.3e-36 qcov:95.20 identity:25.90;
14702 16435 CDS
ID metaerg.pl|04406
allgo_ids GO:0015321; GO:0016020; GO:0044341;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195231.1 9 577 evalue:2.4e-294 qcov:98.60 identity:93.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF02690; PF01895;
pfam_desc Na+/Pi-cotransporter; PhoU domain;
pfam_id Na_Pi_cotrans; PhoU;
pfam_target db:Pfam-A.hmm|PF02690.15 evalue:1.2e-61 score:206.1 best_domain_score:152.6 name:Na_Pi_cotrans; db:Pfam-A.hmm|PF01895.19 evalue:8.8e-27 score:92.6 best_domain_score:49.1 name:PhoU;
tigrfam_acc TIGR00704;
tigrfam_desc Na/Pi-cotransporter II-related protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name NaPi_cotrn_rel;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR00704 evalue:2e-68 score:230.4 best_domain_score:230.0 name:TIGR00704;
tm_num 8;
14702 16435 transmembrane_helix
ID metaerg.pl|04407
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i14720-14773o14873-14941i15002-15070o15098-15151i15224-15292o15335-15403i15440-15508o15536-15604i;
17400 16510 CDS
ID metaerg.pl|04408
allec_ids 3.-.-.-;
allgo_ids GO:0003824; GO:0016787; GO:0046872;
allko_ids K01555;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195162.1 1 295 evalue:2.1e-129 qcov:99.70 identity:76.60;
kegg_pathway_id 00643; 00350;
kegg_pathway_name Styrene degradation; Tyrosine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF01557;
pfam_desc Fumarylacetoacetate (FAA) hydrolase family;
pfam_id FAA_hydrolase;
pfam_target db:Pfam-A.hmm|PF01557.18 evalue:1.9e-65 score:219.8 best_domain_score:219.5 name:FAA_hydrolase;
sprot_desc Fumarylacetoacetate hydrolase domain-containing protein 2;
sprot_id sp|Q6GLT8|FAHD2_XENLA;
sprot_target db:uniprot_sprot|sp|Q6GLT8|FAHD2_XENLA 1 293 evalue:3.1e-55 qcov:99.00 identity:35.90;
17570 17800 CDS
ID metaerg.pl|04409
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195157.1 1 76 evalue:3.2e-29 qcov:100.00 identity:89.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF11184;
pfam_desc Protein of unknown function (DUF2969);
pfam_id DUF2969;
pfam_target db:Pfam-A.hmm|PF11184.8 evalue:2.1e-20 score:72.1 best_domain_score:72.0 name:DUF2969;
17926 18966 CDS
ID metaerg.pl|04410
allgo_ids GO:0016021; GO:0005886; GO:0004527;
allko_ids K07058;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195154.1 1 339 evalue:6.0e-160 qcov:98.00 identity:87.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF03631;
pfam_desc Virulence factor BrkB;
pfam_id Virul_fac_BrkB;
pfam_target db:Pfam-A.hmm|PF03631.15 evalue:1e-53 score:181.8 best_domain_score:181.6 name:Virul_fac_BrkB;
sprot_desc Putative ribonuclease-like protein YfkH;
sprot_id sp|O34437|YFKH_BACSU;
sprot_target db:uniprot_sprot|sp|O34437|YFKH_BACSU 21 283 evalue:4.2e-35 qcov:76.00 identity:33.50;
tigrfam_acc TIGR00765;
tigrfam_desc YihY family inner membrane protein;
tigrfam_mainrole Unknown function;
tigrfam_name yihY_not_rbn;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00765 evalue:3.2e-30 score:105.0 best_domain_score:104.7 name:TIGR00765;
tm_num 6;
17926 18966 transmembrane_helix
ID metaerg.pl|04411
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i18049-18117o18214-18282i18343-18411o18478-18546i18583-18651o18679-18747i;
19163 19522 CDS
ID metaerg.pl|04412
allgo_ids GO:0016491;
allko_ids K00537;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195152.1 1 119 evalue:1.5e-46 qcov:100.00 identity:76.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF03960;
pfam_desc ArsC family;
pfam_id ArsC;
pfam_target db:Pfam-A.hmm|PF03960.15 evalue:5.5e-08 score:32.0 best_domain_score:31.5 name:ArsC;
sprot_desc hypothetical protein;
sprot_id sp|O32175|YUSI_BACSU;
sprot_target db:uniprot_sprot|sp|O32175|YUSI_BACSU 1 115 evalue:8.8e-25 qcov:96.60 identity:45.20;
tigrfam_acc TIGR01617;
tigrfam_desc transcriptional regulator, Spx/MgsR family;
tigrfam_mainrole Regulatory functions;
tigrfam_name arsC_related;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01617 evalue:9.6e-27 score:92.7 best_domain_score:92.6 name:TIGR01617;
19527 19883 CDS
ID metaerg.pl|04413
allgo_ids GO:0005960; GO:0019464; GO:0009249;
allko_ids K02437;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195149.1 1 115 evalue:7.3e-41 qcov:97.50 identity:71.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF01597;
pfam_desc Glycine cleavage H-protein;
pfam_id GCV_H;
pfam_target db:Pfam-A.hmm|PF01597.19 evalue:4.7e-15 score:54.8 best_domain_score:54.5 name:GCV_H;
sprot_desc Glycine cleavage system H protein;
sprot_id sp|C0ZL15|GCSH_BREBN;
sprot_target db:uniprot_sprot|sp|C0ZL15|GCSH_BREBN 22 116 evalue:7.4e-08 qcov:80.50 identity:34.30;
20375 21187 CDS
ID metaerg.pl|04414
allec_ids 2.7.1.50;
allgo_ids GO:0052855; GO:0005524; GO:0004417; GO:0000287; GO:0009228; GO:0009229;
allko_ids K00878;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195143.1 9 269 evalue:4.8e-88 qcov:96.70 identity:67.00;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id THISYN-PWY;
metacyc_pathway_name superpathway of thiamine diphosphate biosynthesis I;;
metacyc_pathway_type Super-Pathways; Thiamine-Biosynthesis;;
pfam_acc PF01256; PF02110; PF08543;
pfam_desc Carbohydrate kinase; Hydroxyethylthiazole kinase family; Phosphomethylpyrimidine kinase;
pfam_id Carb_kinase; HK; Phos_pyr_kin;
pfam_target db:Pfam-A.hmm|PF01256.17 evalue:7.3e-10 score:38.0 best_domain_score:37.6 name:Carb_kinase; db:Pfam-A.hmm|PF02110.15 evalue:2.2e-81 score:272.1 best_domain_score:271.9 name:HK; db:Pfam-A.hmm|PF08543.12 evalue:1.7e-06 score:26.8 best_domain_score:26.4 name:Phos_pyr_kin;
sprot_desc Hydroxyethylthiazole kinase;
sprot_id sp|A4IN26|THIM_GEOTN;
sprot_target db:uniprot_sprot|sp|A4IN26|THIM_GEOTN 1 267 evalue:3.6e-58 qcov:98.90 identity:45.90;
tigrfam_acc TIGR00694;
tigrfam_desc hydroxyethylthiazole kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name thiM;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00694 evalue:3.4e-84 score:281.4 best_domain_score:281.2 name:TIGR00694;
21184 21993 CDS
ID metaerg.pl|04415
allec_ids 2.7.1.49; 2.7.1.49 2.7.4.7;
allgo_ids GO:0052855; GO:0005829; GO:0005524; GO:0008902; GO:0008972; GO:0009228; GO:0009229;
allko_ids K00941;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481811.1 2 267 evalue:7.5e-118 qcov:98.90 identity:78.60;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id THISYNARA-PWY; THISYN-PWY;
metacyc_pathway_name superpathway of thiamine diphosphate biosynthesis III (eukaryotes);; superpathway of thiamine diphosphate biosynthesis I;;
metacyc_pathway_type Super-Pathways; Thiamine-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;;
pfam_acc PF01256; PF00294; PF08543;
pfam_desc Carbohydrate kinase; pfkB family carbohydrate kinase; Phosphomethylpyrimidine kinase;
pfam_id Carb_kinase; PfkB; Phos_pyr_kin;
pfam_target db:Pfam-A.hmm|PF01256.17 evalue:2.4e-05 score:23.2 best_domain_score:22.7 name:Carb_kinase; db:Pfam-A.hmm|PF00294.24 evalue:1.2e-12 score:47.0 best_domain_score:46.1 name:PfkB; db:Pfam-A.hmm|PF08543.12 evalue:1.5e-100 score:334.9 best_domain_score:334.7 name:Phos_pyr_kin;
sprot_desc Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;
sprot_id sp|P44697|THID_HAEIN;
sprot_target db:uniprot_sprot|sp|P44697|THID_HAEIN 1 266 evalue:1.7e-79 qcov:98.90 identity:56.00;
tigrfam_acc TIGR00097;
tigrfam_desc hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name HMP-P_kinase;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00097 evalue:1.4e-106 score:354.6 best_domain_score:354.4 name:TIGR00097;
21990 22640 CDS
ID metaerg.pl|04416
allec_ids 2.5.1.3;
allgo_ids GO:0000287; GO:0004789; GO:0009228; GO:0009229;
allko_ids K00788;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195137.1 1 215 evalue:1.7e-83 qcov:99.50 identity:71.20;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id THISYN-PWY; THISYNARA-PWY;
metacyc_pathway_name superpathway of thiamine diphosphate biosynthesis I;; superpathway of thiamine diphosphate biosynthesis III (eukaryotes);;
metacyc_pathway_type Super-Pathways; Thiamine-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;;
pfam_acc PF02581;
pfam_desc Thiamine monophosphate synthase;
pfam_id TMP-TENI;
pfam_target db:Pfam-A.hmm|PF02581.17 evalue:5.2e-60 score:201.1 best_domain_score:200.9 name:TMP-TENI;
sprot_desc Thiamine-phosphate synthase;
sprot_id sp|A6VPG9|THIE_ACTSZ;
sprot_target db:uniprot_sprot|sp|A6VPG9|THIE_ACTSZ 1 213 evalue:9.9e-51 qcov:98.60 identity:49.80;
tigrfam_acc TIGR00693;
tigrfam_desc thiamine-phosphate diphosphorylase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name thiE;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00693 evalue:1.3e-59 score:200.0 best_domain_score:199.8 name:TIGR00693;
22751 23545 CDS
ID metaerg.pl|04417
allec_ids 1.-.-.-;
allgo_ids GO:0016491;
allko_ids K00022; K12420;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195134.1 1 264 evalue:3.8e-122 qcov:100.00 identity:85.60;
kegg_pathway_id 00650; 00071; 00062; 00930; 00380; 00310; 00280; 00281;
kegg_pathway_name Butanoate metabolism; Fatty acid metabolism; Fatty acid elongation in mitochondria; Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5469; PWY-5479; PWY-5987; PWY-6113; PWYG-321; PWY-4302; PWY-5271; PWY-5826; PWY-2821;
metacyc_pathway_name sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;;
metacyc_pathway_type LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:6.3e-53 score:178.4 best_domain_score:177.9 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:7.9e-36 score:123.0 best_domain_score:122.7 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:1.9e-13 score:49.9 best_domain_score:49.1 name:KR;
sprot_desc Putative oxidoreductase SadH;
sprot_id sp|P9WGP8|SADH_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WGP8|SADH_MYCTO 5 259 evalue:1.2e-37 qcov:96.60 identity:36.40;
23696 25138 CDS
ID metaerg.pl|04418
allgo_ids GO:0003824; GO:0016021; GO:0016020; GO:0005886; GO:0008808; GO:0032049;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195132.1 1 480 evalue:6.5e-237 qcov:100.00 identity:84.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00614; PF13091;
pfam_desc Phospholipase D Active site motif; PLD-like domain;
pfam_id PLDc; PLDc_2;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:8.8e-09 score:34.4 best_domain_score:18.7 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:8.5e-29 score:99.4 best_domain_score:52.5 name:PLDc_2;
sprot_desc hypothetical protein;
sprot_id sp|P56117|Y190_HELPY;
sprot_target db:uniprot_sprot|sp|P56117|Y190_HELPY 56 426 evalue:2.6e-27 qcov:77.30 identity:27.00;
tm_num 1;
23696 25138 transmembrane_helix
ID metaerg.pl|04419
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i23729-23797o;
25389 26162 CDS
ID metaerg.pl|04420
allgo_ids GO:0005524; GO:0016887; GO:0005886;
allko_ids K09013; K06861;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195129.1 1 257 evalue:6.5e-135 qcov:100.00 identity:97.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.1e-21 score:77.0 best_domain_score:76.6 name:ABC_tran;
sprot_desc Probable ABC transporter ATP-binding protein SpyM3_0208;
sprot_id sp|P0CZ42|Y208_STRP3;
sprot_target db:uniprot_sprot|sp|P0CZ42|Y208_STRP3 1 251 evalue:1.5e-106 qcov:97.70 identity:75.30;
tigrfam_acc TIGR01978;
tigrfam_desc FeS assembly ATPase SufC;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name sufC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01978 evalue:1.6e-110 score:367.4 best_domain_score:367.2 name:TIGR01978;
26183 27481 CDS
ID metaerg.pl|04421
allgo_ids GO:0016226;
allko_ids K09015;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195126.1 1 432 evalue:1.3e-228 qcov:100.00 identity:94.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF01458;
pfam_desc Uncharacterized protein family (UPF0051);
pfam_id UPF0051;
pfam_target db:Pfam-A.hmm|PF01458.17 evalue:2.9e-59 score:199.6 best_domain_score:199.3 name:UPF0051;
sprot_desc FeS cluster assembly protein SufD;
sprot_id sp|O32165|SUFD_BACSU;
sprot_target db:uniprot_sprot|sp|O32165|SUFD_BACSU 15 429 evalue:2.8e-97 qcov:96.10 identity:46.60;
tigrfam_acc TIGR01981;
tigrfam_desc FeS assembly protein SufD;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name sufD;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01981 evalue:3.6e-77 score:258.5 best_domain_score:258.2 name:TIGR01981;
27478 28716 CDS
ID metaerg.pl|04422
allec_ids 2.8.1.7;
allgo_ids GO:0009058; GO:0030170; GO:0031071; GO:0006534;
allko_ids K01556; K11717; K04487;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195123.1 1 412 evalue:8.0e-228 qcov:100.00 identity:94.90;
kegg_pathway_id 00380; 00730;
kegg_pathway_name Tryptophan metabolism; Thiamine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY0-1021; PWY0-1061;
metacyc_pathway_name L-alanine biosynthesis III;; superpathway of L-alanine biosynthesis;;
metacyc_pathway_type ALANINE-SYN;; ALANINE-SYN; Super-Pathways;;
pfam_acc PF00155; PF00266; PF01212; PF01053; PF01041;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Beta-eliminating lyase; Cys/Met metabolism PLP-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; Aminotran_5; Beta_elim_lyase; Cys_Met_Meta_PP; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:8.8e-08 score:30.9 best_domain_score:30.6 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:1.6e-156 score:520.2 best_domain_score:520.0 name:Aminotran_5; db:Pfam-A.hmm|PF01212.21 evalue:5.1e-05 score:21.9 best_domain_score:21.6 name:Beta_elim_lyase; db:Pfam-A.hmm|PF01053.20 evalue:4.5e-08 score:31.3 best_domain_score:28.8 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF01041.17 evalue:3.3e-05 score:22.6 best_domain_score:21.2 name:DegT_DnrJ_EryC1;
sprot_desc Probable cysteine desulfurase;
sprot_id sp|Q9K7A0|CSD_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K7A0|CSD_BACHD 7 409 evalue:1.2e-145 qcov:97.80 identity:61.00;
tigrfam_acc TIGR01979;
tigrfam_desc cysteine desulfurase, SufS family;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name sufS;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01979 evalue:2.4e-187 score:621.9 best_domain_score:621.7 name:TIGR01979;
28703 29167 CDS
ID metaerg.pl|04423
allgo_ids GO:0005506; GO:0016226; GO:0051536;
allko_ids K04488;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195120.1 1 154 evalue:4.5e-75 qcov:100.00 identity:92.90;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF01592;
pfam_desc NifU-like N terminal domain;
pfam_id NifU_N;
pfam_target db:Pfam-A.hmm|PF01592.16 evalue:1.2e-28 score:99.0 best_domain_score:98.6 name:NifU_N;
sprot_desc Iron-sulfur cluster assembly scaffold protein IscU;
sprot_id sp|Q9A1G2|ISCU_STRP1;
sprot_target db:uniprot_sprot|sp|Q9A1G2|ISCU_STRP1 1 141 evalue:4.0e-38 qcov:91.60 identity:56.70;
tigrfam_acc TIGR01994;
tigrfam_desc SUF system FeS assembly protein, NifU family;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name SUF_scaf_2;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01994 evalue:1.6e-54 score:182.8 best_domain_score:182.6 name:TIGR01994;
29226 30740 CDS
ID metaerg.pl|04424
allgo_ids GO:0016226;
allko_ids K09014;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195116.1 41 504 evalue:1.7e-264 qcov:92.10 identity:96.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF01458;
pfam_desc Uncharacterized protein family (UPF0051);
pfam_id UPF0051;
pfam_target db:Pfam-A.hmm|PF01458.17 evalue:1.9e-73 score:246.0 best_domain_score:245.6 name:UPF0051;
sp YES;
sprot_desc FeS cluster assembly protein SufB;
sprot_id sp|O32162|SUFB_BACSU;
sprot_target db:uniprot_sprot|sp|O32162|SUFB_BACSU 43 504 evalue:6.5e-194 qcov:91.70 identity:68.80;
tigrfam_acc TIGR01980;
tigrfam_desc FeS assembly protein SufB;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name sufB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01980 evalue:3.5e-220 score:730.4 best_domain_score:730.2 name:TIGR01980;
29226 29303 signal_peptide
ID metaerg.pl|04425
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
32139 31225 CDS
ID metaerg.pl|04426
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192189.1 1 304 evalue:1.2e-132 qcov:100.00 identity:77.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF08378;
pfam_desc Nuclease-related domain;
pfam_id NERD;
pfam_target db:Pfam-A.hmm|PF08378.11 evalue:3.7e-10 score:39.5 best_domain_score:38.4 name:NERD;
32381 33292 CDS
ID metaerg.pl|04427
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Lacticigenium;s__Lacticigenium naphtae;
genomedb_acc GCF_000425865.1;
genomedb_target db:genomedb|GCF_000425865.1|WP_027108533.1 1 303 evalue:1.8e-139 qcov:100.00 identity:84.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00892; PF00893; PF06800;
pfam_desc EamA-like transporter family; Small Multidrug Resistance protein; Sugar transport protein;
pfam_id EamA; Multi_Drug_Res; Sugar_transport;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.4e-11 score:44.0 best_domain_score:29.7 name:EamA; db:Pfam-A.hmm|PF00893.19 evalue:2.8e-05 score:24.0 best_domain_score:21.0 name:Multi_Drug_Res; db:Pfam-A.hmm|PF06800.12 evalue:4.7e-08 score:31.9 best_domain_score:24.9 name:Sugar_transport;
tm_num 9;
32381 33292 transmembrane_helix
ID metaerg.pl|04428
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology o32390-32443i32480-32539o32624-32692i32717-32785o32798-32857i32894-32938o32981-33034i33068-33127o33155-33214i;
34270 33476 CDS
ID metaerg.pl|04429
allec_ids 5.1.-.-;
allgo_ids GO:0003824; GO:0009058; GO:0016853;
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptoclostridiaceae;g__Peptoclostridium_A;s__Peptoclostridium_A acidaminophilum;
genomedb_acc GCF_000597865.1;
genomedb_target db:genomedb|GCF_000597865.1|WP_096325235.1 1 264 evalue:8.1e-141 qcov:100.00 identity:89.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF02567;
pfam_desc Phenazine biosynthesis-like protein;
pfam_id PhzC-PhzF;
pfam_target db:Pfam-A.hmm|PF02567.16 evalue:1.3e-55 score:188.1 best_domain_score:187.8 name:PhzC-PhzF;
sprot_desc Uncharacterized isomerase PA2770;
sprot_id sp|Q9I073|Y2770_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I073|Y2770_PSEAE 2 260 evalue:5.3e-62 qcov:98.10 identity:47.30;
tigrfam_acc TIGR00654;
tigrfam_desc phenazine biosynthesis protein, PhzF family;
tigrfam_mainrole Cellular processes;
tigrfam_name PhzF_family;
tigrfam_sub1role Toxin production and resistance;
tigrfam_target db:TIGRFAMs.hmm|TIGR00654 evalue:1.2e-35 score:122.5 best_domain_score:121.2 name:TIGR00654;
34788 34411 CDS
ID metaerg.pl|04430
allko_ids K09022;
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium_AM;s__Clostridium_AM drakei;
genomedb_acc GCF_000633595.2;
genomedb_target db:genomedb|GCF_000633595.2|WP_032075287.1 1 125 evalue:5.5e-47 qcov:100.00 identity:76.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF01042;
pfam_desc Endoribonuclease L-PSP;
pfam_id Ribonuc_L-PSP;
pfam_target db:Pfam-A.hmm|PF01042.21 evalue:4.6e-42 score:142.1 best_domain_score:141.9 name:Ribonuc_L-PSP;
sprot_desc RutC family protein PYRAB12510;
sprot_id sp|Q9UZA3|Y1251_PYRAB;
sprot_target db:uniprot_sprot|sp|Q9UZA3|Y1251_PYRAB 1 125 evalue:3.5e-32 qcov:100.00 identity:50.00;
tigrfam_acc TIGR00004;
tigrfam_desc reactive intermediate/imine deaminase;
tigrfam_mainrole Cellular processes;
tigrfam_name TIGR00004;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00004 evalue:1.1e-50 score:170.1 best_domain_score:169.9 name:TIGR00004;
34908 35240 CDS
ID metaerg.pl|04431
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Peptoclostridiaceae;g__Peptoclostridium_A;s__Peptoclostridium_A acidaminophilum;
genomedb_acc GCF_000597865.1;
genomedb_target db:genomedb|GCF_000597865.1|WP_025435007.1 1 110 evalue:6.6e-44 qcov:100.00 identity:75.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF01638;
pfam_desc HxlR-like helix-turn-helix;
pfam_id HxlR;
pfam_target db:Pfam-A.hmm|PF01638.17 evalue:6e-26 score:89.4 best_domain_score:89.1 name:HxlR;
sprot_desc Putative regulatory protein MalR;
sprot_id sp|Q93K57|MALR_FUSMR;
sprot_target db:uniprot_sprot|sp|Q93K57|MALR_FUSMR 6 108 evalue:1.3e-19 qcov:93.60 identity:41.70;
36363 35578 CDS
ID metaerg.pl|04432
allec_ids 2.-.-.-;
allgo_ids GO:0005515; GO:0016740;
allko_ids K04097; K00799; K11209;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192194.1 1 261 evalue:2.1e-141 qcov:100.00 identity:92.30;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id LIPA-CORESYN-PWY; LPSSYN-PWY;
metacyc_pathway_name lipid A-core biosynthesis (E. coli K-12);; superpathway of lipopolysaccharide biosynthesis;;
metacyc_pathway_type Glycan-Biosynthesis; Lipid-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;;
pfam_acc PF00043; PF13410; PF14497; PF02798; PF13409; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_2; GST_C_3; GST_N; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:7.7e-09 score:34.9 best_domain_score:34.0 name:GST_C; db:Pfam-A.hmm|PF13410.6 evalue:1.5e-11 score:43.3 best_domain_score:42.4 name:GST_C_2; db:Pfam-A.hmm|PF14497.6 evalue:2.4e-08 score:33.3 best_domain_score:32.2 name:GST_C_3; db:Pfam-A.hmm|PF02798.20 evalue:2.4e-05 score:23.9 best_domain_score:22.8 name:GST_N; db:Pfam-A.hmm|PF13409.6 evalue:6.7e-06 score:25.6 best_domain_score:24.3 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:2e-05 score:24.1 best_domain_score:23.1 name:GST_N_3;
sprot_desc Uncharacterized GST-like protein SMU_1296;
sprot_id sp|Q8DTN7|Y1296_STRMU;
sprot_target db:uniprot_sprot|sp|Q8DTN7|Y1296_STRMU 1 261 evalue:1.9e-96 qcov:100.00 identity:63.50;
36988 36476 CDS
ID metaerg.pl|04433
allec_ids 2.3.1.57;
allgo_ids GO:0016747; GO:0005737; GO:0004145; GO:0000287; GO:0006598;
allko_ids K00657;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192197.1 4 167 evalue:1.2e-71 qcov:96.50 identity:81.70;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-6117; PWY-0;
metacyc_pathway_name spermine and spermidine degradation I;; putrescine degradation III;;
metacyc_pathway_type SPERMINE-SPERMIDINE-DEG;; Putrescine-Degradation;;
pfam_acc PF00583; PF13673; PF13302; PF13420; PF13508; PF13523; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_3; Acetyltransf_4; Acetyltransf_7; Acetyltransf_8; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:7.7e-15 score:54.4 best_domain_score:54.1 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:2.1e-09 score:36.7 best_domain_score:36.3 name:Acetyltransf_10; db:Pfam-A.hmm|PF13302.7 evalue:1.6e-20 score:73.4 best_domain_score:73.2 name:Acetyltransf_3; db:Pfam-A.hmm|PF13420.7 evalue:3.4e-12 score:46.0 best_domain_score:45.8 name:Acetyltransf_4; db:Pfam-A.hmm|PF13508.7 evalue:1.9e-09 score:37.1 best_domain_score:36.6 name:Acetyltransf_7; db:Pfam-A.hmm|PF13523.6 evalue:7e-10 score:38.0 best_domain_score:34.9 name:Acetyltransf_8; db:Pfam-A.hmm|PF08445.10 evalue:2.6e-06 score:26.5 best_domain_score:26.0 name:FR47;
sprot_desc Spermidine N(1)-acetyltransferase;
sprot_id sp|P0A952|ATDA_ECO57;
sprot_target db:uniprot_sprot|sp|P0A952|ATDA_ECO57 7 167 evalue:2.9e-29 qcov:94.70 identity:38.50;
37498 38145 CDS
ID metaerg.pl|04434
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192200.1 1 215 evalue:1.6e-94 qcov:100.00 identity:90.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
tm_num 6;
37498 38145 transmembrane_helix
ID metaerg.pl|04435
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i37516-37584o37627-37695i37714-37782o37825-37893i37954-38022o38035-38094i;
38255 38440 CDS
ID metaerg.pl|04436
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium subtropicum;
genomedb_acc GCF_900112455.1;
genomedb_target db:genomedb|GCF_900112455.1|WP_091529744.1 1 61 evalue:1.4e-11 qcov:100.00 identity:63.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
39136 38600 CDS
ID metaerg.pl|04437
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848652.1 1 170 evalue:2.1e-63 qcov:95.50 identity:77.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF03729;
pfam_desc Short repeat of unknown function (DUF308);
pfam_id DUF308;
pfam_target db:Pfam-A.hmm|PF03729.13 evalue:3.7e-09 score:36.0 best_domain_score:26.6 name:DUF308;
tm_num 6;
39136 38600 transmembrane_helix
ID metaerg.pl|04438
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i38612-38665o38693-38761i38780-38848o38861-38929i38948-39007o39035-39103i;
40218 39949 CDS
ID metaerg.pl|04439
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Amphibacillaceae;g__Streptohalobacillus;s__Streptohalobacillus salinus;
genomedb_acc GCF_003201605.1;
genomedb_target db:genomedb|GCF_003201605.1|WP_110250257.1 7 87 evalue:2.5e-09 qcov:91.00 identity:45.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF14150;
pfam_desc YesK-like protein;
pfam_id YesK;
pfam_target db:Pfam-A.hmm|PF14150.6 evalue:2.6e-08 score:33.2 best_domain_score:32.9 name:YesK;
tm_num 3;
40218 39949 transmembrane_helix
ID metaerg.pl|04440
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology o39961-40020i40057-40125o40138-40206i;
40712 40287 CDS
ID metaerg.pl|04441
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192226.1 1 136 evalue:5.5e-27 qcov:96.50 identity:50.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
tm_num 2;
40712 40287 transmembrane_helix
ID metaerg.pl|04442
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i40506-40574o40584-40652i;
42215 41073 CDS
ID metaerg.pl|04443
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000159.1_2 7 379 evalue:1.9e-111 qcov:98.20 identity:55.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
sp YES;
41073 41129 lipoprotein_signal_peptide
ID metaerg.pl|04444
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
42997 42434 CDS
ID metaerg.pl|04445
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Tetragenococcus;s__Tetragenococcus halophilus;
genomedb_acc GCF_000283615.1;
genomedb_target db:genomedb|GCF_000283615.1|WP_014125084.1 1 185 evalue:3.3e-64 qcov:98.90 identity:64.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF08002;
pfam_desc Protein of unknown function (DUF1697);
pfam_id DUF1697;
pfam_target db:Pfam-A.hmm|PF08002.11 evalue:1.1e-30 score:106.0 best_domain_score:105.6 name:DUF1697;
43267 43974 CDS
ID metaerg.pl|04446
allec_ids 3.1.3.5;
allgo_ids GO:0005737; GO:0008253; GO:0046872; GO:0000166;
allko_ids K08723;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091268520.1 4 229 evalue:2.4e-80 qcov:96.20 identity:62.40;
kegg_pathway_id 00760; 00240; 00230;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Pyrimidine metabolism; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5044; PWY-6353; URSIN-PWY; PWY-5381; PWY-5695;
metacyc_pathway_name purine nucleotides degradation I (plants);; purine nucleotides degradation II (aerobic);; ureide biosynthesis;; pyridine nucleotide cycling (plants);; inosine 5'-phosphate degradation;;
metacyc_pathway_type Purine-Degradation; Super-Pathways;; Purine-Degradation; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; NAD-Metabolism;; Purine-Degradation;;
pfam_acc PF13419; PF00702; PF13242;
pfam_desc Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD_2; Hydrolase; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:6.5e-25 score:87.5 best_domain_score:86.9 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:8.5e-13 score:48.3 best_domain_score:46.9 name:Hydrolase; db:Pfam-A.hmm|PF13242.6 evalue:6.2e-11 score:41.4 best_domain_score:40.3 name:Hydrolase_like;
sprot_desc Pyrimidine 5'-nucleotidase YjjG;
sprot_id sp|P0A8Y2|YJJG_ECO57;
sprot_target db:uniprot_sprot|sp|P0A8Y2|YJJG_ECO57 7 229 evalue:2.7e-25 qcov:94.90 identity:35.30;
tigrfam_acc TIGR01509; TIGR01549; TIGR02254;
tigrfam_desc HAD hydrolase, family IA, variant 3; HAD hydrolase, family IA, variant 1; noncanonical pyrimidine nucleotidase, YjjG family;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name HAD-SF-IA-v3; HAD-SF-IA-v1; YjjG/YfnB;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:2e-08 score:33.7 best_domain_score:25.6 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01549 evalue:1.7e-12 score:47.2 best_domain_score:38.0 name:TIGR01549; db:TIGRFAMs.hmm|TIGR02254 evalue:5.5e-54 score:182.1 best_domain_score:181.9 name:TIGR02254;
44655 45455 CDS
ID metaerg.pl|04447
allec_ids 1.-.-.-;
allgo_ids GO:0003858; GO:0016616; GO:0055114;
allko_ids K12420; K00019;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192205.1 1 266 evalue:8.5e-122 qcov:100.00 identity:86.50;
kegg_pathway_id 00650; 00072;
kegg_pathway_name Butanoate metabolism; Synthesis and degradation of ketone bodies;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5469; PWY-5987; PWY-5479; PWY-6113; PWYG-321; PWY-4302; PWY-5271; PWY-5826; PWY-2821;
metacyc_pathway_name sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;;
metacyc_pathway_type LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;;
pfam_acc PF00106; PF13561; PF08659; PF02719;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain; Polysaccharide biosynthesis protein;
pfam_id adh_short; adh_short_C2; KR; Polysacc_synt_2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2e-57 score:193.1 best_domain_score:192.8 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.5e-51 score:173.7 best_domain_score:173.2 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:1.6e-16 score:60.0 best_domain_score:59.6 name:KR; db:Pfam-A.hmm|PF02719.15 evalue:1.6e-05 score:23.5 best_domain_score:22.3 name:Polysacc_synt_2;
sprot_desc Uncharacterized oxidoreductase YxjF;
sprot_id sp|P42317|YXJF_BACSU;
sprot_target db:uniprot_sprot|sp|P42317|YXJF_BACSU 10 262 evalue:4.1e-30 qcov:95.10 identity:31.00;
45932 46729 CDS
ID metaerg.pl|04448
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192234.1 1 265 evalue:7.4e-134 qcov:100.00 identity:86.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:1.7e-09 score:37.2 best_domain_score:36.1 name:Lactamase_B;
47374 46877 CDS
ID metaerg.pl|04449
allec_ids 1.7.1.13;
allgo_ids GO:0008616; GO:0033739; GO:0005737; GO:0046857;
allko_ids K09457;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192236.1 1 165 evalue:1.1e-95 qcov:100.00 identity:98.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF14489;
pfam_desc QueF-like protein;
pfam_id QueF;
pfam_target db:Pfam-A.hmm|PF14489.6 evalue:9.8e-36 score:121.0 best_domain_score:120.5 name:QueF;
sprot_desc NADPH-dependent 7-cyano-7-deazaguanine reductase;
sprot_id sp|B7IN38|QUEF_BACC2;
sprot_target db:uniprot_sprot|sp|B7IN38|QUEF_BACC2 1 165 evalue:1.5e-78 qcov:100.00 identity:77.60;
tigrfam_acc TIGR03139;
tigrfam_desc 7-cyano-7-deazaguanine reductase;
tigrfam_name QueF-II;
tigrfam_target db:TIGRFAMs.hmm|TIGR03139 evalue:6.7e-54 score:179.8 best_domain_score:179.5 name:TIGR03139;
47874 47374 CDS
ID metaerg.pl|04450
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192239.1 1 166 evalue:3.7e-75 qcov:100.00 identity:90.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF06177;
pfam_desc QueT transporter;
pfam_id QueT;
pfam_target db:Pfam-A.hmm|PF06177.11 evalue:9.2e-23 score:80.4 best_domain_score:80.2 name:QueT;
tm_num 5;
47874 47374 transmembrane_helix
ID metaerg.pl|04451
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology o47416-47484i47503-47571o47581-47649i47686-47754o47764-47832i;
49506 48091 CDS
ID metaerg.pl|04452
allgo_ids GO:0009058; GO:0030170; GO:0003677; GO:0003700; GO:0008483; GO:1901605;
allko_ids K00825; K00835;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192435.1 4 467 evalue:4.3e-225 qcov:98.50 identity:84.10;
kegg_pathway_id 00300; 00290; 00310;
kegg_pathway_name Lysine biosynthesis; Valine, leucine and isoleucine biosynthesis; Lysine degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00155; PF00392; PF08279;
pfam_desc Aminotransferase class I and II; Bacterial regulatory proteins, gntR family; HTH domain;
pfam_id Aminotran_1_2; GntR; HTH_11;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:3.9e-29 score:101.2 best_domain_score:100.6 name:Aminotran_1_2; db:Pfam-A.hmm|PF00392.21 evalue:6.1e-21 score:73.1 best_domain_score:71.6 name:GntR; db:Pfam-A.hmm|PF08279.12 evalue:6.2e-05 score:22.1 best_domain_score:20.5 name:HTH_11;
sprot_desc Uncharacterized HTH-type transcriptional regulator YisV;
sprot_id sp|Q796Q6|YISV_BACSU;
sprot_target db:uniprot_sprot|sp|Q796Q6|YISV_BACSU 1 460 evalue:2.1e-61 qcov:97.70 identity:34.10;
49647 50537 CDS
ID metaerg.pl|04453
allec_ids 4.3.3.6;
allgo_ids GO:0008033; GO:0017150; GO:0050660; GO:0055114; GO:0036381; GO:0042823;
allko_ids K06215;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192241.1 1 296 evalue:1.1e-151 qcov:100.00 identity:96.30;
kegg_pathway_id 00750;
kegg_pathway_name Vitamin B6 metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF01207; PF00218; PF01680; PF05690;
pfam_desc Dihydrouridine synthase (Dus); Indole-3-glycerol phosphate synthase; SOR/SNZ family; Thiazole biosynthesis protein ThiG;
pfam_id Dus; IGPS; SOR_SNZ; ThiG;
pfam_target db:Pfam-A.hmm|PF01207.17 evalue:2e-07 score:29.7 best_domain_score:18.4 name:Dus; db:Pfam-A.hmm|PF00218.21 evalue:9.3e-05 score:20.9 best_domain_score:14.8 name:IGPS; db:Pfam-A.hmm|PF01680.17 evalue:5.4e-106 score:352.2 best_domain_score:351.9 name:SOR_SNZ; db:Pfam-A.hmm|PF05690.14 evalue:4.9e-09 score:35.1 best_domain_score:26.8 name:ThiG;
sprot_desc Pyridoxal 5'-phosphate synthase subunit PdxS;
sprot_id sp|B3GXB6|PDXS_ACTP7;
sprot_target db:uniprot_sprot|sp|B3GXB6|PDXS_ACTP7 4 296 evalue:9.5e-129 qcov:99.00 identity:80.50;
tigrfam_acc TIGR00343;
tigrfam_desc pyridoxal 5'-phosphate synthase, synthase subunit Pdx1;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00343;
tigrfam_sub1role Pyridoxine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00343 evalue:5.2e-151 score:501.2 best_domain_score:501.0 name:TIGR00343;
50540 51112 CDS
ID metaerg.pl|04454
allec_ids 4.3.3.6; 2.6.-.-;
allgo_ids GO:0003824; GO:0009236; GO:0004359; GO:0036381; GO:0006543; GO:0042823;
allko_ids K08681;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192244.1 1 190 evalue:4.9e-87 qcov:100.00 identity:86.30;
kegg_pathway_id 00750;
kegg_pathway_name Vitamin B6 metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF07685; PF01174;
pfam_desc CobB/CobQ-like glutamine amidotransferase domain; SNO glutamine amidotransferase family;
pfam_id GATase_3; SNO;
pfam_target db:Pfam-A.hmm|PF07685.14 evalue:3.6e-08 score:32.5 best_domain_score:32.0 name:GATase_3; db:Pfam-A.hmm|PF01174.19 evalue:2.4e-57 score:193.1 best_domain_score:192.9 name:SNO;
sprot_desc Pyridoxal 5'-phosphate synthase subunit PdxT;
sprot_id sp|Q8EN04|PDXT_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8EN04|PDXT_OCEIH 5 190 evalue:5.9e-47 qcov:97.90 identity:53.50;
tigrfam_acc TIGR03800;
tigrfam_desc pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name PLP_synth_Pdx2;
tigrfam_sub1role Pyridoxine;
tigrfam_target db:TIGRFAMs.hmm|TIGR03800 evalue:4.2e-66 score:221.5 best_domain_score:221.3 name:TIGR03800;
51563 51979 CDS
ID metaerg.pl|04455
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034299590.1 1 138 evalue:5.1e-54 qcov:100.00 identity:73.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF01243; PF16242;
pfam_desc Pyridoxamine 5'-phosphate oxidase; Pyridoxamine 5'-phosphate oxidase like;
pfam_id Putative_PNPOx; Pyrid_ox_like;
pfam_target db:Pfam-A.hmm|PF01243.20 evalue:5.5e-12 score:45.0 best_domain_score:44.5 name:Putative_PNPOx; db:Pfam-A.hmm|PF16242.5 evalue:2.8e-15 score:55.4 best_domain_score:55.2 name:Pyrid_ox_like;
52967 52044 CDS
ID metaerg.pl|04456
allgo_ids GO:0004553; GO:0005975;
allko_ids K08235;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Amphibacillaceae;g__Streptohalobacillus;s__Streptohalobacillus salinus;
genomedb_acc GCF_003201605.1;
genomedb_target db:genomedb|GCF_003201605.1|WP_110250604.1 2 307 evalue:3.9e-102 qcov:99.70 identity:54.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00722;
pfam_desc Glycosyl hydrolases family 16;
pfam_id Glyco_hydro_16;
pfam_target db:Pfam-A.hmm|PF00722.21 evalue:1.1e-22 score:79.6 best_domain_score:78.1 name:Glyco_hydro_16;
53468 53833 CDS
ID metaerg.pl|04457
allgo_ids GO:0000160; GO:0005829; GO:0032993; GO:0001216; GO:0003700; GO:0000156; GO:0000976; GO:0071978; GO:0006817; GO:0080040; GO:0045893;
allko_ids K11383; K13761; K02486; K12767; K07769; K04757; K11357; K10125; K07647; K07717; K07675; K07676; K10681; K06379; K07709; K07644; K02482; K02480; K07653; K07636; K11527; K07678; K10715; K02668; K03388; K08479; K10916; K02489; K07716; K07710; K01768; K07677; K07645; K07708; K07704; K10909; K08282; K01937; K11231; K02491; K11711; K07642; K00760; K02484; K11356; K11640; K11354; K07778; K02575; K07768; K07711; K02478; K07679; K07648; K07651; K07718; K07654; K07682; K03407; K07637; K07646; K07641; K01120; K07673; K08475; K07639; K07652; K07657;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265814.1 1 116 evalue:1.7e-40 qcov:95.90 identity:75.00;
kegg_pathway_id 00983; 00240; 05111; 00230; 03090; 02020; 04011; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Folate biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:6.1e-28 score:96.5 best_domain_score:96.3 name:Response_reg;
sprot_desc Phosphate regulon transcriptional regulatory protein PhoB;
sprot_id sp|P23620|PHOB_PSEAE;
sprot_target db:uniprot_sprot|sp|P23620|PHOB_PSEAE 2 110 evalue:2.5e-11 qcov:90.10 identity:39.10;
53823 57041 CDS
ID metaerg.pl|04458
allgo_ids GO:0000155; GO:0007165;
allko_ids K07639; K08475; K07673; K01120; K07641; K13598; K07646; K07652; K07682; K07649; K00936; K07777; K07654; K07637; K03407; K07648; K07679; K02478; K07718; K07698; K07651; K11623; K11633; K02575; K07768; K07778; K11354; K07683; K13533; K11328; K00873; K07711; K08884; K08082; K02484; K04486; K11640; K11356; K11711; K07642; K07643; K11231; K02491; K07708; K07677; K07645; K08282; K10909; K07704; K07716; K07697; K02489; K07656; K01768; K07710; K07640; K03388; K02668; K10916; K08479; K07674; K02030; K11527; K13587; K10715; K07678; K02480; K02482; K08801; K14489; K07636; K07653; K07638; K07709; K13532; K07644; K01769; K06379; K10681; K07676; K07650; K13040; K10942; K07647; K07680; K07675; K07717; K14509; K07769; K11520; K12767; K02486; K11383; K02342; K11629; K10125; K11357; K02476; K11617; K04757;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium subtropicum;
genomedb_acc GCF_900112455.1;
genomedb_target db:genomedb|GCF_900112455.1|WP_091529709.1 1 1070 evalue:0.0e+00 qcov:99.80 identity:69.20;
kegg_pathway_id 00340; 00790; 00620; 03090; 02020; 04011; 03030; 05111; 00230; 00010; 00710;
kegg_pathway_name Histidine metabolism; Folate biosynthesis; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; DNA replication; Vibrio cholerae pathogenic cycle; Purine metabolism; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF12729; PF02518; PF00512; PF00989; PF08447; PF08448; PF13426; PF00072;
pfam_desc Four helix bundle sensory module for signal transduction; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS domain; Response regulator receiver domain;
pfam_id 4HB_MCP_1; HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF12729.7 evalue:8.4e-07 score:27.9 best_domain_score:27.9 name:4HB_MCP_1; db:Pfam-A.hmm|PF02518.26 evalue:1.6e-31 score:108.4 best_domain_score:108.4 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.1e-22 score:79.1 best_domain_score:77.0 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:1.1e-12 score:47.2 best_domain_score:45.1 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:4.8e-09 score:35.6 best_domain_score:34.3 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:2.7e-12 score:46.2 best_domain_score:41.7 name:PAS_4; db:Pfam-A.hmm|PF13426.7 evalue:3.4e-15 score:55.4 best_domain_score:50.7 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:4.6e-11 score:42.1 best_domain_score:40.3 name:Response_reg;
sp YES;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.3e-17 score:63.3 best_domain_score:55.7 name:TIGR00229;
tm_num 2;
53823 53948 signal_peptide
ID metaerg.pl|04459
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
53823 57041 transmembrane_helix
ID metaerg.pl|04460
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology o53865-53933i54384-54452o;
57066 58685 CDS
ID metaerg.pl|04461
allgo_ids GO:0000160;
allko_ids K08884; K07711; K02575; K07768; K11354; K07778; K07718; K07651; K07648; K02478; K07679; K07637; K03407; K07682; K07654; K07652; K01120; K07673; K07639; K08475; K07646; K07641; K08282; K01937; K10909; K07704; K07708; K07645; K07677; K13490; K02491; K11231; K07642; K11711; K11640; K11356; K00760; K02484; K07636; K07653; K02480; K14489; K02482; K07678; K10715; K11527; K02030; K10916; K08479; K03388; K02668; K01768; K07640; K07710; K07716; K02489; K11357; K10125; K04757; K07769; K13761; K11383; K02486; K12767; K07717; K07675; K10942; K07647; K07676; K10681; K06379; K07650; K07644; K07709;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848585.1 1 539 evalue:1.1e-136 qcov:100.00 identity:50.50;
kegg_pathway_id 00790; 02020; 04011; 03090; 00230; 05111; 00240; 00983;
kegg_pathway_name Folate biosynthesis; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00990; PF01627; PF00072;
pfam_desc Diguanylate cyclase, GGDEF domain; Hpt domain; Response regulator receiver domain;
pfam_id GGDEF; Hpt; Response_reg;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:1.1e-31 score:109.0 best_domain_score:108.4 name:GGDEF; db:Pfam-A.hmm|PF01627.23 evalue:1.6e-08 score:33.9 best_domain_score:32.7 name:Hpt; db:Pfam-A.hmm|PF00072.24 evalue:1.3e-36 score:124.4 best_domain_score:90.9 name:Response_reg;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:1.4e-32 score:111.8 best_domain_score:110.9 name:TIGR00254;
58700 59740 CDS
ID metaerg.pl|04462
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848586.1 1 346 evalue:2.5e-97 qcov:100.00 identity:54.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF02985; PF13646; PF12755;
pfam_desc HEAT repeat; HEAT repeats; Vacuolar 14 Fab1-binding region;
pfam_id HEAT; HEAT_2; Vac14_Fab1_bd;
pfam_target db:Pfam-A.hmm|PF02985.22 evalue:4.2e-09 score:35.2 best_domain_score:14.4 name:HEAT; db:Pfam-A.hmm|PF13646.6 evalue:1.2e-14 score:53.7 best_domain_score:34.8 name:HEAT_2; db:Pfam-A.hmm|PF12755.7 evalue:2.4e-05 score:24.1 best_domain_score:15.7 name:Vac14_Fab1_bd;
tm_num 1;
58700 59740 transmembrane_helix
ID metaerg.pl|04463
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology o58709-58777i;
59793 61220 CDS
ID metaerg.pl|04464
allgo_ids GO:0016757;
allko_ids K12997; K00698; K00694; K00729; K00710; K00721; K13693;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034301695.1 1 475 evalue:1.1e-220 qcov:100.00 identity:80.20;
kegg_pathway_id 00530; 01030; 00500; 00510;
kegg_pathway_name Aminosugars metabolism; Glycan structures - biosynthesis 1; Starch and sucrose metabolism; N-Glycan biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF03142; PF00535; PF10111; PF13641; PF13506; PF13632;
pfam_desc Chitin synthase; Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyltransferase like family 2; Glycosyl transferase family 21; Glycosyl transferase family group 2;
pfam_id Chitin_synth_2; Glycos_transf_2; Glyco_tranf_2_2; Glyco_tranf_2_3; Glyco_transf_21; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF03142.15 evalue:6.8e-15 score:53.9 best_domain_score:41.3 name:Chitin_synth_2; db:Pfam-A.hmm|PF00535.26 evalue:2.6e-24 score:85.2 best_domain_score:82.1 name:Glycos_transf_2; db:Pfam-A.hmm|PF10111.9 evalue:9.1e-07 score:27.8 best_domain_score:19.3 name:Glyco_tranf_2_2; db:Pfam-A.hmm|PF13641.6 evalue:7.1e-24 score:84.2 best_domain_score:77.7 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13506.6 evalue:6.4e-08 score:31.5 best_domain_score:29.6 name:Glyco_transf_21; db:Pfam-A.hmm|PF13632.6 evalue:9e-14 score:51.1 best_domain_score:51.1 name:Glyco_trans_2_3;
tm_num 4;
59793 61220 transmembrane_helix
ID metaerg.pl|04465
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology o59835-59903i60507-60575o60870-60938i60957-61025o;
61418 61969 CDS
ID metaerg.pl|04466
allec_ids 2.3.1.-;
allgo_ids GO:0005737; GO:0008080; GO:1990189; GO:0008999; GO:0017198;
allko_ids K03817;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192261.1 1 183 evalue:5.0e-81 qcov:100.00 identity:80.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5400; PWY-5209; PWY-5965; PWY-6412; PWY-5393; KDO-LIPASYN-PWY; PWY-5405; PWY-5972; PWY-5307; PWY-6318; PWY-5284; ECASYN-PWY; P3-PWY; PWY-6515; PWY-6295; THREOCAT-PWY; PWY-6438; PWY-84; PWY-5987; PWY-6411; PWY-5268; PWY0-881; PWY-5140; PWY-5313; CENTBENZCOA-PWY; PWY-6316; PWY-6404; PWY1-3; PWY-6397; PWY-6442; PWY-6312; PWY-6418; BENZCOA-PWY; PWY-5184; PWY-4801; KDO-NAGLIPASYN-PWY; PWY-5139; PWY-6310; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5080; PWY-5477; PWY-5981; PWY-5437; LPSSYN-PWY; PWY-6432; PWY1A0-6325; PWY-6413; FASYN-INITIAL-PWY; PWYG-321; PWY-6113;
metacyc_pathway_name amaranthin biosynthesis;; methyl-coenzyme M oxidation to CO2;; fatty acid biosynthesis initiation III;; ginsenoside degradation II;; raspberry ketone biosynthesis;; (Kdo)2-lipid A biosynthesis I;; superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; gentiodelphin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; shisonin biosynthesis;; enterobacterial common antigen biosynthesis;; gallate degradation III (anaerobic);; phloridzin biosynthesis;; ; superpathway of L-threonine metabolism;; phenylphenalenone biosynthesis;; resveratrol biosynthesis;; sorgoleone biosynthesis;; ginsenoside degradation I;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; cannabinoid biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; barbaloin biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; aloesone biosynthesis I;; superpathway of (Kdo)2-lipid A biosynthesis;; pelargonidin conjugates biosynthesis;; aloesone biosynthesis II;; sophorolipid biosynthesis;; very long chain fatty acid biosynthesis I;; gallotannin biosynthesis;; CDP-diacylglycerol biosynthesis III;; L-threonine degradation I;; superpathway of lipopolysaccharide biosynthesis;; curcuminoid biosynthesis;; actinorhodin biosynthesis;; ginsenoside degradation III;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type BETALAIN-ALKALOIDS;; METHANOGENESIS;; Fatty-acid-biosynthesis;; Ginsenoside-Degradation;; POLYKETIDE-SYN;; Lipid-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; ANTHOCYANIN-SYN;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; GALLATE-DEG;; FLAVONOID-SYN;; ; Super-Pathways; THREONINE-DEG;; POLYKETIDE-SYN;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; QUINONE-SYN;; Ginsenoside-Degradation;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Storage-Compounds-Biosynthesis;; Cell-Wall-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; POLYKETIDE-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; POLYKETIDE-SYN;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis;; GALLOTANNINS;; CDP-diacylglycerol-Biosynthesis;; THREONINE-DEG;; Lipid-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; TERPENOID-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00583; PF13302; PF13420;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_3; Acetyltransf_4;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:7.7e-12 score:44.7 best_domain_score:44.3 name:Acetyltransf_1; db:Pfam-A.hmm|PF13302.7 evalue:6.5e-23 score:81.2 best_domain_score:80.8 name:Acetyltransf_3; db:Pfam-A.hmm|PF13420.7 evalue:2.7e-06 score:26.8 best_domain_score:24.0 name:Acetyltransf_4;
sprot_desc Putative ribosomal N-acetyltransferase YdaF;
sprot_id sp|P96579|YDAF_BACSU;
sprot_target db:uniprot_sprot|sp|P96579|YDAF_BACSU 1 179 evalue:3.2e-26 qcov:97.80 identity:33.30;
62160 62723 CDS
ID metaerg.pl|04467
allec_ids 2.3.1.-;
allgo_ids GO:0005737; GO:0008080; GO:1990189; GO:0008999; GO:0017198;
allko_ids K03817;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192264.1 1 187 evalue:6.7e-81 qcov:100.00 identity:75.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5209; PWY-5965; PWY-5400; PWY-5307; PWY-6318; PWY-5405; PWY-5972; PWY-6412; PWY-5393; KDO-LIPASYN-PWY; THREOCAT-PWY; PWY-6438; PWY-84; ECASYN-PWY; P3-PWY; PWY-6515; PWY-6295; PWY-5284; PWY-6316; CENTBENZCOA-PWY; PWY-6404; PWY-5313; PWY-5140; PWY-6411; PWY-5987; PWY-5268; PWY0-881; KDO-NAGLIPASYN-PWY; PWY-4801; PWY-5184; BENZCOA-PWY; PWY-6312; PWY-6442; PWY-6418; PWY1-3; PWY-6397; PWY-5080; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5139; PWY-6310; PWY-5477; PWY-5981; PWY-5437; PWY-6113; PWY-6413; FASYN-INITIAL-PWY; PWYG-321; PWY-6432; PWY1A0-6325; LPSSYN-PWY;
metacyc_pathway_name methyl-coenzyme M oxidation to CO2;; fatty acid biosynthesis initiation III;; amaranthin biosynthesis;; gentiodelphin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; ginsenoside degradation II;; raspberry ketone biosynthesis;; (Kdo)2-lipid A biosynthesis I;; superpathway of L-threonine metabolism;; phenylphenalenone biosynthesis;; resveratrol biosynthesis;; enterobacterial common antigen biosynthesis;; gallate degradation III (anaerobic);; phloridzin biosynthesis;; ; shisonin biosynthesis;; aromatic polyketides biosynthesis;; benzoyl-CoA degradation II (anaerobic);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; cannabinoid biosynthesis;; ginsenoside degradation I;; sorgoleone biosynthesis;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of (Kdo)2-lipid A biosynthesis;; aloesone biosynthesis I;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; polyhydroxybutanoate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; very long chain fatty acid biosynthesis I;; sophorolipid biosynthesis;; pelargonidin conjugates biosynthesis;; aloesone biosynthesis II;; gallotannin biosynthesis;; CDP-diacylglycerol biosynthesis III;; L-threonine degradation I;; superpathway of mycolate biosynthesis;; ginsenoside degradation III;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; curcuminoid biosynthesis;; actinorhodin biosynthesis;; superpathway of lipopolysaccharide biosynthesis;;
metacyc_pathway_type METHANOGENESIS;; Fatty-acid-biosynthesis;; BETALAIN-ALKALOIDS;; ANTHOCYANIN-SYN;; PHENYLALANINE-DEG;; BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; Ginsenoside-Degradation;; POLYKETIDE-SYN;; Lipid-Biosynthesis;; Super-Pathways; THREONINE-DEG;; POLYKETIDE-SYN;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; GALLATE-DEG;; FLAVONOID-SYN;; ; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Benzoyl-CoA-Degradation;; Cell-Wall-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN; Super-Pathways;; TERPENOPHENOLICS-SYN;; Ginsenoside-Degradation;; QUINONE-SYN;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; Storage-Compounds-Biosynthesis;; Cell-Wall-Biosynthesis;; Fatty-acid-biosynthesis;; Lipid-Biosynthesis;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; GALLOTANNINS;; CDP-diacylglycerol-Biosynthesis;; THREONINE-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOID-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;;
pfam_acc PF00583; PF13302; PF13420;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_3; Acetyltransf_4;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:8.7e-10 score:38.1 best_domain_score:37.7 name:Acetyltransf_1; db:Pfam-A.hmm|PF13302.7 evalue:1e-22 score:80.5 best_domain_score:80.2 name:Acetyltransf_3; db:Pfam-A.hmm|PF13420.7 evalue:6.4e-08 score:32.1 best_domain_score:31.9 name:Acetyltransf_4;
sprot_desc Putative ribosomal N-acetyltransferase YdaF;
sprot_id sp|P96579|YDAF_BACSU;
sprot_target db:uniprot_sprot|sp|P96579|YDAF_BACSU 1 182 evalue:1.2e-28 qcov:97.30 identity:33.90;
62825 64033 CDS
ID metaerg.pl|04468
allec_ids 1.-.-.-;
allgo_ids GO:0016491;
allko_ids K12420;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192267.1 1 401 evalue:1.1e-184 qcov:99.80 identity:82.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5826; PWY-2821; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987;
metacyc_pathway_name hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2.9e-42 score:143.6 best_domain_score:143.1 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:5.7e-34 score:116.9 best_domain_score:116.5 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:1.5e-10 score:40.5 best_domain_score:40.0 name:KR;
sprot_desc Uncharacterized oxidoreductase YxnA;
sprot_id sp|O32291|YXNA_BACSU;
sprot_target db:uniprot_sprot|sp|O32291|YXNA_BACSU 5 340 evalue:2.3e-93 qcov:83.60 identity:50.70;
tm_num 2;
62825 64033 transmembrane_helix
ID metaerg.pl|04469
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i62900-62959o63812-63880i;
64514 64236 CDS
ID metaerg.pl|04470
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192284.1 1 92 evalue:1.7e-29 qcov:100.00 identity:83.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
tm_num 1;
64514 64236 transmembrane_helix
ID metaerg.pl|04471
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i64290-64358o;
65719 64838 CDS
ID metaerg.pl|04472
allgo_ids GO:0043565;
allko_ids K01768;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192286.1 1 293 evalue:5.1e-144 qcov:100.00 identity:91.80;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF01381; PF13560; PF00515; PF07719;
pfam_desc Helix-turn-helix; Helix-turn-helix domain; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id HTH_3; HTH_31; TPR_1; TPR_2;
pfam_target db:Pfam-A.hmm|PF01381.22 evalue:3.4e-08 score:32.7 best_domain_score:32.4 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:4.8e-07 score:29.3 best_domain_score:28.5 name:HTH_31; db:Pfam-A.hmm|PF00515.28 evalue:4.3e-10 score:38.2 best_domain_score:19.4 name:TPR_1; db:Pfam-A.hmm|PF07719.17 evalue:1.7e-11 score:42.6 best_domain_score:19.3 name:TPR_2;
65991 66968 CDS
ID metaerg.pl|04473
allec_ids 1.13.11.-;
allgo_ids GO:0005737; GO:0051213; GO:0046872; GO:0019439; GO:0009636;
allko_ids K00465; K15975;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192288.1 1 325 evalue:1.5e-168 qcov:100.00 identity:89.20;
kegg_pathway_id 00362; 00590; 00626; 00623; 00351; 00643;
kegg_pathway_name Benzoate degradation via hydroxylation; Arachidonic acid metabolism; Naphthalene and anthracene degradation; 2,4-Dichlorobenzoate degradation; 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation; Styrene degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id P661-PWY; PWY-5408; PWY-5163; P662-PWY; 2ASDEG-PWY; PWY-5405; PWY-6550; PWY-5407; PWY-5406; PWY-2501;
metacyc_pathway_name dibenzo-p-dioxin degradation;; 9-lipoxygenase and 9-hydroperoxide lyase pathway;; p-cumate degradation to 2-hydroxypentadienoate;; dibenzofuran degradation;; orthanilate degradation;; superpathway of betalain biosynthesis;; carbazole degradation;; 9-lipoxygenase and 9-allene oxide synthase pathway;; divinyl ether biosynthesis I;; fatty acid α-oxidation I;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;; FATTY-ACID-DERIVATIVE-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;; AROMATIC-COMPOUNDS-DEGRADATION;; AROMATIC-COMPOUNDS-DEGRADATION;; BETALAIN-ALKALOIDS; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; FATTY-ACID-DERIVATIVE-SYN;; Divinyl-Ether-Biosynthesis; Metabolic-Clusters;; Fatty-Acid-Degradation;;
pfam_acc PF00903;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:7.5e-20 score:70.7 best_domain_score:66.2 name:Glyoxalase;
sprot_desc Putative ring-cleaving dioxygenase MhqA;
sprot_id sp|O34689|MHQA_BACSU;
sprot_target db:uniprot_sprot|sp|O34689|MHQA_BACSU 3 313 evalue:3.1e-64 qcov:95.70 identity:40.80;
68378 67047 CDS
ID metaerg.pl|04474
allgo_ids GO:0016021; GO:0005886; GO:0005328;
allko_ids K03308;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192290.1 1 442 evalue:1.1e-217 qcov:99.80 identity:89.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00209;
pfam_desc Sodium:neurotransmitter symporter family;
pfam_id SNF;
pfam_target db:Pfam-A.hmm|PF00209.18 evalue:1.3e-55 score:188.3 best_domain_score:105.2 name:SNF;
sprot_desc Uncharacterized sodium-dependent transporter YhdH;
sprot_id sp|O07577|YHDH_BACSU;
sprot_target db:uniprot_sprot|sp|O07577|YHDH_BACSU 2 442 evalue:2.3e-86 qcov:99.50 identity:41.90;
tm_num 11;
68378 67047 transmembrane_helix
ID metaerg.pl|04475
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i67080-67148o67176-67244i67302-67370o67470-67529i67566-67634o67692-67760i67794-67862o67935-68003i68064-68132o68175-68243i68304-68372o;
68635 69468 CDS
ID metaerg.pl|04476
allec_ids 2.3.1.19;
allgo_ids GO:0016746; GO:0050182; GO:0019605;
allko_ids K00634;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192293.1 1 275 evalue:1.3e-128 qcov:99.30 identity:86.50;
kegg_pathway_id 00650;
kegg_pathway_name Butanoate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id GLUDEG-II-PWY; CENTFERM-PWY;
metacyc_pathway_name L-glutamate degradation VII (to butanoate);; pyruvate fermentation to butanoate;;
metacyc_pathway_type Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;;
pfam_acc PF01515;
pfam_desc Phosphate acetyl/butaryl transferase;
pfam_id PTA_PTB;
pfam_target db:Pfam-A.hmm|PF01515.19 evalue:1.1e-37 score:129.3 best_domain_score:129.0 name:PTA_PTB;
sprot_desc Probable phosphate butyryltransferase;
sprot_id sp|P54530|PTB_BACSU;
sprot_target db:uniprot_sprot|sp|P54530|PTB_BACSU 2 275 evalue:1.0e-44 qcov:98.90 identity:36.30;
69494 70561 CDS
ID metaerg.pl|04477
allec_ids 2.7.2.7;
allgo_ids GO:0005622; GO:0016301; GO:0016310; GO:0016774; GO:0005737; GO:0005524; GO:0047761;
allko_ids K00929;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192295.1 1 355 evalue:2.0e-166 qcov:100.00 identity:84.20;
kegg_pathway_id 00650;
kegg_pathway_name Butanoate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id GLUDEG-II-PWY; CENTFERM-PWY;
metacyc_pathway_name L-glutamate degradation VII (to butanoate);; pyruvate fermentation to butanoate;;
metacyc_pathway_type Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;;
pfam_acc PF00871; PF00480;
pfam_desc Acetokinase family; ROK family;
pfam_id Acetate_kinase; ROK;
pfam_target db:Pfam-A.hmm|PF00871.17 evalue:3.9e-63 score:212.7 best_domain_score:212.4 name:Acetate_kinase; db:Pfam-A.hmm|PF00480.20 evalue:5e-07 score:28.7 best_domain_score:23.2 name:ROK;
sprot_desc Probable butyrate kinase;
sprot_id sp|Q9RPS7|BUK_ENTFA;
sprot_target db:uniprot_sprot|sp|Q9RPS7|BUK_ENTFA 5 355 evalue:6.1e-114 qcov:98.90 identity:58.10;
tigrfam_acc TIGR02707;
tigrfam_desc butyrate kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name butyr_kinase;
tigrfam_sub1role Fermentation;
tigrfam_target db:TIGRFAMs.hmm|TIGR02707 evalue:2.8e-151 score:502.7 best_domain_score:502.5 name:TIGR02707;
70583 71998 CDS
ID metaerg.pl|04478
allec_ids 1.8.1.4;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0005737; GO:0004148; GO:0009055; GO:0050660; GO:0045454; GO:0006096;
allko_ids K00219; K03885; K00356; K00529; K00362; K00363; K00382; K01008; K00266; K00176; K03388; K00383; K00658; K00384;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192298.1 1 471 evalue:6.7e-247 qcov:100.00 identity:93.00;
kegg_pathway_id 00260; 00020; 00280; 00310; 00010; 00360; 00190; 00071; 00910; 00252; 00251; 00240; 00480; 00720; 00790; 00450; 00620;
kegg_pathway_name Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation; Lysine degradation; Glycolysis / Gluconeogenesis; Phenylalanine metabolism; Oxidative phosphorylation; Fatty acid metabolism; Nitrogen metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Pyrimidine metabolism; Glutathione metabolism; Reductive carboxylate cycle (CO2 fixation); Folate biosynthesis; Selenoamino acid metabolism; Pyruvate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5173; PWY-5084; PWY-5046; PYRUVDEHYD-PWY; GLYCLEAV-PWY; PWY-5464;
metacyc_pathway_name superpathway of acetyl-CoA biosynthesis;; 2-oxoglutarate decarboxylation to succinyl-CoA;; 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;; pyruvate decarboxylation to acetyl CoA;; glycine cleavage;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; Super-Pathways;; Respiration;; Respiration;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; GLYCINE-DEG;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF02737; PF00890; PF01494; PF12831; PF01134; PF03486; PF13450; PF00070; PF07992; PF13738; PF02852;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; FAD binding domain; FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id 3HCDH_N; FAD_binding_2; FAD_binding_3; FAD_oxidored; GIDA; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF02737.18 evalue:6.7e-07 score:28.6 best_domain_score:21.4 name:3HCDH_N; db:Pfam-A.hmm|PF00890.24 evalue:1.4e-06 score:26.9 best_domain_score:24.6 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:2.2e-07 score:29.7 best_domain_score:14.6 name:FAD_binding_3; db:Pfam-A.hmm|PF12831.7 evalue:3.3e-08 score:32.5 best_domain_score:31.5 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:2.6e-14 score:52.3 best_domain_score:42.8 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:1e-07 score:30.2 best_domain_score:16.3 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:1.2e-08 score:34.3 best_domain_score:20.1 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:2.9e-15 score:55.8 best_domain_score:54.9 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:4.4e-62 score:209.2 best_domain_score:208.9 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:3.4e-10 score:38.9 best_domain_score:25.7 name:Pyr_redox_3; db:Pfam-A.hmm|PF02852.22 evalue:8.5e-31 score:105.7 best_domain_score:102.4 name:Pyr_redox_dim;
sprot_desc Dihydrolipoyl dehydrogenase;
sprot_id sp|P54533|DLDH2_BACSU;
sprot_target db:uniprot_sprot|sp|P54533|DLDH2_BACSU 1 470 evalue:1.3e-127 qcov:99.80 identity:51.20;
tigrfam_acc TIGR01350;
tigrfam_desc dihydrolipoyl dehydrogenase;
tigrfam_name lipoamide_DH;
tigrfam_target db:TIGRFAMs.hmm|TIGR01350 evalue:1.1e-154 score:514.7 best_domain_score:514.5 name:TIGR01350;
72016 73005 CDS
ID metaerg.pl|04479
allec_ids 1.2.4.4;
allgo_ids GO:0008661; GO:0016114; GO:0003863; GO:0003826; GO:0046872; GO:0009083;
allko_ids K11381; K00166; K00161; K00167; K00162;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192301.1 1 329 evalue:2.5e-179 qcov:100.00 identity:95.40;
kegg_pathway_id 00020; 00650; 00252; 00620; 00290; 00280; 00010;
kegg_pathway_name Citrate cycle (TCA cycle); Butanoate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5046;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF13292; PF00676; PF02775; PF00456;
pfam_desc 1-deoxy-D-xylulose-5-phosphate synthase; Dehydrogenase E1 component; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Transketolase, thiamine diphosphate binding domain;
pfam_id DXP_synthase_N; E1_dh; TPP_enzyme_C; Transketolase_N;
pfam_target db:Pfam-A.hmm|PF13292.6 evalue:2.3e-06 score:26.3 best_domain_score:25.4 name:DXP_synthase_N; db:Pfam-A.hmm|PF00676.20 evalue:3.9e-79 score:264.9 best_domain_score:264.7 name:E1_dh; db:Pfam-A.hmm|PF02775.21 evalue:5.6e-05 score:22.2 best_domain_score:20.3 name:TPP_enzyme_C; db:Pfam-A.hmm|PF00456.21 evalue:0.00015 score:20.1 best_domain_score:19.6 name:Transketolase_N;
sprot_desc 2-oxoisovalerate dehydrogenase subunit alpha;
sprot_id sp|P37940|ODBA_BACSU;
sprot_target db:uniprot_sprot|sp|P37940|ODBA_BACSU 8 328 evalue:6.3e-81 qcov:97.60 identity:49.40;
73030 74016 CDS
ID metaerg.pl|04480
allec_ids 1.2.4.4;
allgo_ids GO:0003863; GO:0003826; GO:0009083; GO:0007584;
allko_ids K00167; K00615; K00162; K00161; K11381;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192303.1 1 328 evalue:2.9e-180 qcov:100.00 identity:98.50;
kegg_pathway_id 00620; 00252; 01051; 00650; 00030; 00710; 00010; 00280; 00290; 00020;
kegg_pathway_name Pyruvate metabolism; Alanine and aspartate metabolism; Biosynthesis of ansamycins; Butanoate metabolism; Pentose phosphate pathway; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Citrate cycle (TCA cycle);
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5046;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF02780; PF02779;
pfam_desc Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain;
pfam_id Transketolase_C; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF02780.20 evalue:7.1e-40 score:135.0 best_domain_score:134.3 name:Transketolase_C; db:Pfam-A.hmm|PF02779.24 evalue:3.3e-39 score:133.6 best_domain_score:131.7 name:Transket_pyr;
sprot_desc 2-oxoisovalerate dehydrogenase subunit beta;
sprot_id sp|P37941|ODBB_BACSU;
sprot_target db:uniprot_sprot|sp|P37941|ODBB_BACSU 1 328 evalue:1.9e-114 qcov:100.00 identity:60.40;
74030 75403 CDS
ID metaerg.pl|04481
allec_ids 2.3.1.168;
allgo_ids GO:0016746; GO:0043754; GO:0006096;
allko_ids K00382; K00163; K00162; K00658; K11381; K09699;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192305.1 1 457 evalue:2.4e-212 qcov:100.00 identity:84.70;
kegg_pathway_id 00020; 00260; 00290; 00280; 00310; 00010; 00650; 00252; 00620;
kegg_pathway_name Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Lysine degradation; Glycolysis / Gluconeogenesis; Butanoate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5046;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF00198; PF00364; PF02817;
pfam_desc 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme; e3 binding domain;
pfam_id 2-oxoacid_dh; Biotin_lipoyl; E3_binding;
pfam_target db:Pfam-A.hmm|PF00198.23 evalue:2.5e-77 score:258.7 best_domain_score:258.2 name:2-oxoacid_dh; db:Pfam-A.hmm|PF00364.22 evalue:4.2e-18 score:64.2 best_domain_score:63.3 name:Biotin_lipoyl; db:Pfam-A.hmm|PF02817.17 evalue:3.3e-13 score:49.0 best_domain_score:47.9 name:E3_binding;
sprot_desc Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex;
sprot_id sp|P37942|ODB2_BACSU;
sprot_target db:uniprot_sprot|sp|P37942|ODB2_BACSU 1 457 evalue:9.3e-99 qcov:100.00 identity:44.80;
76355 75468 CDS
ID metaerg.pl|04482
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0005829; GO:0000986; GO:0043565;
allko_ids K21755;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192307.1 1 295 evalue:6.1e-153 qcov:100.00 identity:94.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:6.1e-17 score:60.6 best_domain_score:57.8 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:2e-18 score:65.8 best_domain_score:65.4 name:LysR_substrate;
sprot_desc HTH-type transcriptional regulator BsdA;
sprot_id sp|P94403|BSDA_BACSU;
sprot_target db:uniprot_sprot|sp|P94403|BSDA_BACSU 1 246 evalue:7.0e-15 qcov:83.40 identity:27.20;
76524 77627 CDS
ID metaerg.pl|04483
allec_ids 1.4.1.9;
allgo_ids GO:0051287; GO:0055114; GO:0050049; GO:0006552;
allko_ids K00263; K00270;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192310.1 1 367 evalue:2.2e-192 qcov:100.00 identity:91.80;
kegg_pathway_id 00290; 00280; 00360; 00400;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Phenylalanine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF02826; PF00208; PF02812;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id 2-Hacid_dh_C; ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:5e-06 score:25.2 best_domain_score:24.2 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF00208.21 evalue:1e-15 score:57.3 best_domain_score:42.9 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:3.1e-25 score:87.8 best_domain_score:86.8 name:ELFV_dehydrog_N;
sprot_desc Leucine dehydrogenase;
sprot_id sp|P0A393|DHLE_BACCE;
sprot_target db:uniprot_sprot|sp|P0A393|DHLE_BACCE 1 367 evalue:1.1e-121 qcov:100.00 identity:61.10;
78083 77691 CDS
ID metaerg.pl|04484
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
78260 78985 CDS
ID metaerg.pl|04485
allec_ids 1.10.3.-;
allgo_ids GO:0005507; GO:0016682; GO:0042803;
allko_ids K05810;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192312.1 1 239 evalue:4.4e-101 qcov:99.20 identity:74.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5439; PWY-5787; PWY-5466; PWY-5405; PWY-5404; PWY-5476;
metacyc_pathway_name betacyanin biosynthesis (via dopamine);; oligomeric urushiol biosynthesis;; matairesinol biosynthesis;; superpathway of betalain biosynthesis;; betaxanthin biosynthesis (via dopaxanthin);; cornusiin E biosynthesis;;
metacyc_pathway_type BETALAIN-ALKALOIDS;; AROMATIC-COMPOUNDS-BIOSYN;; LIGNAN-SYN;; BETALAIN-ALKALOIDS; Super-Pathways;; BETALAIN-ALKALOIDS;; ELLAGITANNINS;;
pfam_acc PF02578;
pfam_desc Multi-copper polyphenol oxidoreductase laccase;
pfam_id Cu-oxidase_4;
pfam_target db:Pfam-A.hmm|PF02578.15 evalue:2.1e-46 score:157.6 best_domain_score:157.4 name:Cu-oxidase_4;
sprot_desc Polyphenol oxidase;
sprot_id sp|Q89ZI8|POLOX_BACTN;
sprot_target db:uniprot_sprot|sp|Q89ZI8|POLOX_BACTN 30 227 evalue:1.5e-18 qcov:82.20 identity:30.40;
79621 79061 CDS
ID metaerg.pl|04486
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192314.1 1 184 evalue:1.3e-63 qcov:98.90 identity:68.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00440;
pfam_desc Bacterial regulatory proteins, tetR family;
pfam_id TetR_N;
pfam_target db:Pfam-A.hmm|PF00440.23 evalue:6.4e-09 score:34.7 best_domain_score:33.9 name:TetR_N;
79791 80354 CDS
ID metaerg.pl|04487
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192316.1 1 187 evalue:4.8e-87 qcov:100.00 identity:85.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF02525; PF03358;
pfam_desc Flavodoxin-like fold; NADPH-dependent FMN reductase;
pfam_id Flavodoxin_2; FMN_red;
pfam_target db:Pfam-A.hmm|PF02525.17 evalue:3.5e-08 score:32.6 best_domain_score:32.2 name:Flavodoxin_2; db:Pfam-A.hmm|PF03358.15 evalue:3.8e-35 score:120.2 best_domain_score:119.8 name:FMN_red;
80519 80788 CDS
ID metaerg.pl|04488
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091489126.1 1 87 evalue:2.8e-21 qcov:97.80 identity:60.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
tm_num 2;
80519 80788 transmembrane_helix
ID metaerg.pl|04489
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i80537-80605o80699-80752i;
80893 81339 CDS
ID metaerg.pl|04490
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192321.1 1 147 evalue:1.2e-72 qcov:99.30 identity:90.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
81409 81777 CDS
ID metaerg.pl|04491
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091489127.1 1 120 evalue:3.9e-37 qcov:98.40 identity:65.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF03061;
pfam_desc Thioesterase superfamily;
pfam_id 4HBT;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:1.3e-05 score:24.6 best_domain_score:24.3 name:4HBT;
81796 82515 CDS
ID metaerg.pl|04492
allko_ids K01697;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848216.1 1 239 evalue:9.1e-91 qcov:100.00 identity:68.20;
kegg_pathway_id 00271; 00450; 00260;
kegg_pathway_name Methionine metabolism; Selenoamino acid metabolism; Glycine, serine and threonine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00571;
pfam_desc CBS domain;
pfam_id CBS;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:4.9e-09 score:35.7 best_domain_score:23.6 name:CBS;
83330 82896 CDS
ID metaerg.pl|04493
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192326.1 1 143 evalue:2.0e-56 qcov:99.30 identity:73.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
84180 83332 CDS
ID metaerg.pl|04494
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481657.1 1 279 evalue:1.0e-85 qcov:98.90 identity:56.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
84339 85361 CDS
ID metaerg.pl|04495
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192328.1 1 332 evalue:1.0e-175 qcov:97.60 identity:90.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF12850;
pfam_desc Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos_2;
pfam_target db:Pfam-A.hmm|PF12850.7 evalue:1e-06 score:28.3 best_domain_score:27.5 name:Metallophos_2;
86131 85484 CDS
ID metaerg.pl|04496
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192333.1 1 212 evalue:3.7e-83 qcov:98.60 identity:69.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00583;
pfam_desc Acetyltransferase (GNAT) family;
pfam_id Acetyltransf_1;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:7.8e-08 score:31.8 best_domain_score:30.7 name:Acetyltransf_1;
86281 86865 CDS
ID metaerg.pl|04497
allgo_ids GO:0016747;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192336.1 1 191 evalue:7.8e-48 qcov:98.50 identity:53.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00583; PF13673; PF13508; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:3.1e-14 score:52.4 best_domain_score:51.4 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:1.6e-08 score:33.8 best_domain_score:31.4 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:2.8e-09 score:36.5 best_domain_score:35.8 name:Acetyltransf_7; db:Pfam-A.hmm|PF08445.10 evalue:2.9e-07 score:29.6 best_domain_score:28.6 name:FR47;
87030 88391 CDS
ID metaerg.pl|04498
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0022857;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192338.1 1 453 evalue:2.6e-232 qcov:100.00 identity:92.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00324; PF13520;
pfam_desc Amino acid permease; Amino acid permease;
pfam_id AA_permease; AA_permease_2;
pfam_target db:Pfam-A.hmm|PF00324.21 evalue:5.2e-21 score:74.0 best_domain_score:73.5 name:AA_permease; db:Pfam-A.hmm|PF13520.6 evalue:2e-40 score:138.2 best_domain_score:137.8 name:AA_permease_2;
sprot_desc hypothetical protein;
sprot_id sp|P75472|Y308_MYCPN;
sprot_target db:uniprot_sprot|sp|P75472|Y308_MYCPN 1 323 evalue:3.4e-08 qcov:71.30 identity:21.30;
tm_num 12;
87030 88391 transmembrane_helix
ID metaerg.pl|04499
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i87048-87107o87150-87218i87315-87383o87411-87470i87504-87557o87615-87683i87720-87788o87879-87947i88017-88085o88128-88181i88215-88283o88293-88352i;
88393 89025 CDS
ID metaerg.pl|04500
allgo_ids GO:0005507; GO:0055070; GO:0005737; GO:0006878;
allko_ids K06201;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192341.1 1 208 evalue:1.3e-72 qcov:99.00 identity:64.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF03932;
pfam_desc CutC family;
pfam_id CutC;
pfam_target db:Pfam-A.hmm|PF03932.14 evalue:1e-57 score:194.2 best_domain_score:194.0 name:CutC;
sprot_desc Copper homeostasis protein CutC;
sprot_id sp|Q830V2|CUTC_ENTFA;
sprot_target db:uniprot_sprot|sp|Q830V2|CUTC_ENTFA 1 208 evalue:2.6e-48 qcov:99.00 identity:46.40;
89211 90404 CDS
ID metaerg.pl|04501
allec_ids 2.7.2.1;
allgo_ids GO:0005622; GO:0016301; GO:0016310; GO:0016774; GO:0005737; GO:0008776; GO:0005524; GO:0000287; GO:0006085; GO:0006082;
allko_ids K00925;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium subtropicum;
genomedb_acc GCF_900112455.1;
genomedb_target db:genomedb|GCF_900112455.1|WP_091529169.1 1 395 evalue:4.3e-170 qcov:99.50 identity:76.50;
kegg_pathway_id 00620; 00640; 00430;
kegg_pathway_name Pyruvate metabolism; Propanoate metabolism; Taurine and hypotaurine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id P441-PWY; P164-PWY; PWY-5482; ACETATEUTIL-PWY; PWY-5497; P461-PWY; METH-ACETATE-PWY; PROPFERM-PWY; FERMENTATION-PWY; PWY-5327; P124-PWY; PWY0-1312; P3-PWY; PWY-5100; PWY-5600; P142-PWY; P161-PWY; PWY-5485; PWY-5676; P41-PWY;
metacyc_pathway_name superpathway of N-acetylneuraminate degradation;; purine nucleobases degradation I (anaerobic);; pyruvate fermentation to acetate II;; superpathway of acetate utilization and formation;; purine nucleobases degradation II (anaerobic);; hexitol fermentation to lactate, formate, ethanol and acetate;; methanogenesis from acetate;; L-alanine fermentation to propanoate and acetate;; mixed acid fermentation;; superpathway of L-lysine degradation;; Bifidobacterium shunt;; acetate and ATP formation from acetyl-CoA I;; gallate degradation III (anaerobic);; pyruvate fermentation to acetate and lactate II;; pyruvate fermentation to acetate VII;; pyruvate fermentation to acetate I;; acetylene degradation (anaerobic);; pyruvate fermentation to acetate IV;; acetyl-CoA fermentation to butanoate II;; pyruvate fermentation to acetate and (S)-lactate I;;
metacyc_pathway_type CARBOXYLATES-DEG; Super-Pathways;; Fermentation; Purine-Degradation;; Pyruvate-Acetate-Fermentation;; CARBOXYLATES-DEG; Super-Pathways;; Fermentation; Purine-Degradation;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; METHANOGENESIS;; Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; LYSINE-DEG; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Acetate-Formation;; GALLATE-DEG;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Acetate-Formation; Pyruvate-Ethanol-Fermentation;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Acetyl-CoA-Butyrate; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;;
pfam_acc PF00871;
pfam_desc Acetokinase family;
pfam_id Acetate_kinase;
pfam_target db:Pfam-A.hmm|PF00871.17 evalue:8.7e-143 score:474.9 best_domain_score:474.8 name:Acetate_kinase;
sprot_desc Acetate kinase;
sprot_id sp|Q833H0|ACKA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q833H0|ACKA_ENTFA 1 395 evalue:5.5e-140 qcov:99.50 identity:63.10;
tigrfam_acc TIGR00016;
tigrfam_desc acetate kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name ackA;
tigrfam_sub1role Fermentation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00016 evalue:6.8e-147 score:488.6 best_domain_score:488.4 name:TIGR00016;
91080 91952 CDS
ID metaerg.pl|04502
allec_ids 3.2.1.80;
allgo_ids GO:0005576; GO:0004564; GO:0051669; GO:0004575; GO:0005987;
allko_ids K01212; K03332; K01193;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_A;g__Bacillus_W;s__Bacillus_W sp002567005;
genomedb_acc GCF_002567005.1;
genomedb_target db:genomedb|GCF_002567005.1|WP_098575832.1 6 290 evalue:5.4e-146 qcov:98.30 identity:80.00;
kegg_pathway_id 00051; 00052; 00500;
kegg_pathway_name Fructose and mannose metabolism; Galactose metabolism; Starch and sucrose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-862;
metacyc_pathway_name fructan degradation;;
metacyc_pathway_type Glycan-Pathways; POLYSACCHARIDES-DEG;;
pfam_acc PF00251;
pfam_desc Glycosyl hydrolases family 32 N-terminal domain;
pfam_id Glyco_hydro_32N;
pfam_target db:Pfam-A.hmm|PF00251.20 evalue:3.7e-88 score:295.2 best_domain_score:295.1 name:Glyco_hydro_32N;
sprot_desc Levanase;
sprot_id sp|P05656|SACC_BACSU;
sprot_target db:uniprot_sprot|sp|P05656|SACC_BACSU 6 290 evalue:2.7e-104 qcov:98.30 identity:62.20;
92007 92564 CDS
ID metaerg.pl|04503
allec_ids 3.2.1.26;
allgo_ids GO:0005737; GO:0004564; GO:0005985;
allko_ids K03332; K01212; K01193;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Anaerobacillaceae;g__Anaerobacillus;s__Anaerobacillus alkalilacustris;
genomedb_acc GCF_001866005.1;
genomedb_target db:genomedb|GCF_001866005.1|WP_071308871.1 1 183 evalue:3.9e-49 qcov:98.90 identity:60.70;
kegg_pathway_id 00052; 00500; 00051;
kegg_pathway_name Galactose metabolism; Starch and sucrose metabolism; Fructose and mannose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id SUCUTIL-PWY; PWY-621;
metacyc_pathway_name sucrose degradation I (sucrose phosphotransferase);; sucrose degradation III (sucrose invertase);;
metacyc_pathway_type SUCROSE-DEG;; SUCROSE-DEG;;
pfam_acc PF08244;
pfam_desc Glycosyl hydrolases family 32 C terminal;
pfam_id Glyco_hydro_32C;
pfam_target db:Pfam-A.hmm|PF08244.12 evalue:5.1e-29 score:100.5 best_domain_score:100.2 name:Glyco_hydro_32C;
sprot_desc Sucrose-6-phosphate hydrolase;
sprot_id sp|Q05936|SCRB_STAXY;
sprot_target db:uniprot_sprot|sp|Q05936|SCRB_STAXY 1 167 evalue:5.8e-07 qcov:90.30 identity:26.20;
93202 94236 CDS
ID metaerg.pl|04504
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015424;
allko_ids K01997; K02003; K02010; K05847; K02006; K02052; K02004; K11084; K02032; K10017; K02017; K02071; K06861; K01996; K10199; K10041; K09810; K10821; K11072; K02045; K02068; K02028; K02065; K01995; K02049; K02031; K01998; K10112; K10111; K10235; K06857; K05816; K11076; K10243; K01990; K09812; K10021; K02023; K10038; K10025; K02018; K10000; K02029; K11962; K02000;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192344.1 1 343 evalue:1.8e-172 qcov:99.70 identity:90.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6171; PWY-6135; PWY-6166; PWY-6188;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF13304; PF00005; PF09383;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; NIL domain;
pfam_id AAA_21; ABC_tran; NIL;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.1e-07 score:31.2 best_domain_score:17.5 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.4e-37 score:128.5 best_domain_score:126.9 name:ABC_tran; db:Pfam-A.hmm|PF09383.10 evalue:1.3e-18 score:65.8 best_domain_score:64.9 name:NIL;
sprot_desc Methionine import ATP-binding protein MetN;
sprot_id sp|Q5KVK2|METN_GEOKA;
sprot_target db:uniprot_sprot|sp|Q5KVK2|METN_GEOKA 1 340 evalue:1.2e-111 qcov:98.80 identity:62.10;
94229 94930 CDS
ID metaerg.pl|04505
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0048473;
allko_ids K02072;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192346.1 1 233 evalue:4.2e-109 qcov:100.00 identity:93.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.4e-25 score:89.4 best_domain_score:87.2 name:BPD_transp_1;
sprot_desc Methionine import system permease protein MetP;
sprot_id sp|O32168|METP_BACSU;
sprot_target db:uniprot_sprot|sp|O32168|METP_BACSU 20 233 evalue:2.2e-51 qcov:91.80 identity:62.10;
tm_num 4;
94229 94930 transmembrane_helix
ID metaerg.pl|04506
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology o94325-94393i94454-94522o94712-94780i94838-94897o;
94963 95784 CDS
ID metaerg.pl|04507
allgo_ids GO:0005886; GO:0006865;
allko_ids K02073;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192348.1 1 273 evalue:2.1e-139 qcov:100.00 identity:91.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF03180;
pfam_desc NLPA lipoprotein;
pfam_id Lipoprotein_9;
pfam_target db:Pfam-A.hmm|PF03180.14 evalue:2.2e-71 score:238.9 best_domain_score:238.7 name:Lipoprotein_9;
sp YES;
sprot_desc Methionine-binding lipoprotein MetQ;
sprot_id sp|O32167|METQ_BACSU;
sprot_target db:uniprot_sprot|sp|O32167|METQ_BACSU 9 273 evalue:2.8e-58 qcov:97.10 identity:43.80;
94963 95016 lipoprotein_signal_peptide
ID metaerg.pl|04508
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
95894 97108 CDS
ID metaerg.pl|04509
allec_ids 2.3.1.9; 2.3.1.16;
allgo_ids GO:0016747; GO:0005737; GO:0003985;
allko_ids K07513; K07823; K07508; K07550; K00626; K00632; K07509; K02615;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481635.1 1 404 evalue:9.7e-210 qcov:100.00 identity:91.80;
kegg_pathway_id 00072; 02020; 00071; 00281; 00280; 00310; 00062; 00620; 01040; 00362; 00592; 00640; 00650; 00380; 00632; 00120;
kegg_pathway_name Synthesis and degradation of ketone bodies; Two-component system - General; Fatty acid metabolism; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; Fatty acid elongation in mitochondria; Pyruvate metabolism; Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation; alpha-Linolenic acid metabolism; Propanoate metabolism; Butanoate metabolism; Tryptophan metabolism; Benzoate degradation via CoA ligation; Bile acid biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id ILEUDEG-PWY; ACETOACETATE-DEG-PWY; PWY-5676; PWY-6146; FAO-PWY; PWY-6174; PWY-5177; PWY-5136; PWY66-368; PWY-5789; PWY-5327; CENTFERM-PWY; TRYPTOPHAN-DEGRADATION-1; PWY-922; GLUDEG-II-PWY; PWY-5184; PWY-561; PWY-5910; PWY-6435; PWY1-3;
metacyc_pathway_name L-isoleucine degradation I;; acetoacetate degradation (to acetyl CoA);; acetyl-CoA fermentation to butanoate II;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; fatty acid β-oxidation I;; mevalonate pathway II (archaea);; glutaryl-CoA degradation;; fatty acid β-oxidation II (peroxisome);; ketolysis;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; superpathway of L-lysine degradation;; pyruvate fermentation to butanoate;; L-tryptophan degradation III (eukaryotic);; mevalonate pathway I;; L-glutamate degradation VII (to butanoate);; toluene degradation VI (anaerobic);; superpathway of glyoxylate cycle and fatty acid degradation;; superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; 4-hydroxybenzoate biosynthesis III (plants);; polyhydroxybutanoate biosynthesis;;
metacyc_pathway_type ISOLEUCINE-DEG;; Fatty-Acid-and-Lipid-Degradation;; Acetyl-CoA-Butyrate; Super-Pathways;; Biosynthesis; Super-Pathways;; Fatty-Acid-Degradation;; Mevalonate-Pathways;; CARBOXYLATES-DEG;; Fatty-Acid-Degradation;; OTHER-ENERGY;; Autotrophic-CO2-Fixation;; LYSINE-DEG; Super-Pathways;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;; Super-Pathways; TRYPTOPHAN-DEG;; Mevalonate-Pathways;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Energy-Metabolism; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; 4-Hydroxybenzoate-Biosynthesis;; Storage-Compounds-Biosynthesis;;
pfam_acc PF02803; PF00108;
pfam_desc Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF02803.18 evalue:1.8e-44 score:149.6 best_domain_score:146.0 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:1.8e-94 score:315.1 best_domain_score:314.4 name:Thiolase_N;
sprot_desc Acetyl-CoA acetyltransferase;
sprot_id sp|P45359|THLA_CLOAB;
sprot_target db:uniprot_sprot|sp|P45359|THLA_CLOAB 1 399 evalue:4.7e-110 qcov:98.80 identity:52.60;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:4.1e-138 score:459.7 best_domain_score:459.5 name:TIGR01930;
97499 98602 CDS
ID metaerg.pl|04510
allec_ids 3.5.4.26; 1.1.1.193; 3.5.4.-;
allgo_ids GO:0002100; GO:0008251; GO:0008703; GO:0008835; GO:0050661; GO:0008270; GO:0009231;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192353.1 1 367 evalue:1.2e-153 qcov:100.00 identity:72.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5209; PWY-5354; PWY-6167; RIBOSYN2-PWY; PWY-6168;
metacyc_pathway_name methyl-coenzyme M oxidation to CO2;; ; flavin biosynthesis II (archaea);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis III (fungi);;
metacyc_pathway_type METHANOGENESIS;; ; Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00383; PF14437; PF01872;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase; RibD C-terminal domain;
pfam_id dCMP_cyt_deam_1; MafB19-deam; RibD_C;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:5.7e-25 score:86.4 best_domain_score:85.7 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:1.3e-14 score:53.4 best_domain_score:52.5 name:MafB19-deam; db:Pfam-A.hmm|PF01872.17 evalue:8e-53 score:178.5 best_domain_score:177.8 name:RibD_C;
sprot_desc Riboflavin biosynthesis protein RibD;
sprot_id sp|P50853|RIBD_ACTPL;
sprot_target db:uniprot_sprot|sp|P50853|RIBD_ACTPL 3 359 evalue:1.9e-94 qcov:97.30 identity:48.20;
tigrfam_acc TIGR00227; TIGR00326;
tigrfam_desc riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribD_Cterm; eubact_ribD;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00227 evalue:1.4e-69 score:233.1 best_domain_score:232.4 name:TIGR00227; db:TIGRFAMs.hmm|TIGR00326 evalue:4.5e-116 score:386.9 best_domain_score:386.8 name:TIGR00326;
98603 99250 CDS
ID metaerg.pl|04511
allec_ids 2.5.1.9;
allgo_ids GO:0004746; GO:0009231;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192357.1 1 215 evalue:1.1e-98 qcov:100.00 identity:87.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id RIBOSYN2-PWY; PWY-6167; PWY-6168;
metacyc_pathway_name flavin biosynthesis I (bacteria and plants);; flavin biosynthesis II (archaea);; flavin biosynthesis III (fungi);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00677;
pfam_desc Lumazine binding domain;
pfam_id Lum_binding;
pfam_target db:Pfam-A.hmm|PF00677.17 evalue:6.3e-49 score:163.1 best_domain_score:88.6 name:Lum_binding;
sprot_desc Riboflavin synthase;
sprot_id sp|P50854|RISA_ACTPL;
sprot_target db:uniprot_sprot|sp|P50854|RISA_ACTPL 1 215 evalue:1.5e-54 qcov:100.00 identity:53.50;
tigrfam_acc TIGR00187;
tigrfam_desc riboflavin synthase, alpha subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribE;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00187 evalue:6.5e-73 score:243.4 best_domain_score:243.1 name:TIGR00187;
99274 100467 CDS
ID metaerg.pl|04512
allec_ids 4.1.99.12; 3.5.4.25;
allgo_ids GO:0008686; GO:0009231; GO:0005525; GO:0003935; GO:0000287; GO:0030145; GO:0008270;
allko_ids K14652;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192360.1 1 397 evalue:4.0e-216 qcov:100.00 identity:93.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-6167; RIBOSYN2-PWY; PWY-6168;
metacyc_pathway_name flavin biosynthesis II (archaea);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis III (fungi);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00926; PF00925;
pfam_desc 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II;
pfam_id DHBP_synthase; GTP_cyclohydro2;
pfam_target db:Pfam-A.hmm|PF00926.19 evalue:6.4e-83 score:276.2 best_domain_score:275.9 name:DHBP_synthase; db:Pfam-A.hmm|PF00925.20 evalue:2.3e-69 score:231.4 best_domain_score:230.5 name:GTP_cyclohydro2;
sprot_desc Riboflavin biosynthesis protein RibBA;
sprot_id sp|A0Q3H7|RIBBA_CLONN;
sprot_target db:uniprot_sprot|sp|A0Q3H7|RIBBA_CLONN 2 397 evalue:1.2e-137 qcov:99.70 identity:60.40;
tigrfam_acc TIGR00505; TIGR00506;
tigrfam_desc GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone-4-phosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribA; ribB;
tigrfam_sub1role Riboflavin, FMN, and FAD; Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00505 evalue:5.5e-78 score:260.0 best_domain_score:259.4 name:TIGR00505; db:TIGRFAMs.hmm|TIGR00506 evalue:4e-76 score:254.2 best_domain_score:253.8 name:TIGR00506;
100514 100978 CDS
ID metaerg.pl|04513
allec_ids 2.5.1.78;
allgo_ids GO:0009231; GO:0009349; GO:0000906;
allko_ids K00794;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192362.1 1 154 evalue:4.7e-72 qcov:100.00 identity:92.90;
kegg_pathway_id 00740;
kegg_pathway_name Riboflavin metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-6168; PWY-6167; RIBOSYN2-PWY;
metacyc_pathway_name flavin biosynthesis III (fungi);; flavin biosynthesis II (archaea);; flavin biosynthesis I (bacteria and plants);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00885;
pfam_desc 6,7-dimethyl-8-ribityllumazine synthase;
pfam_id DMRL_synthase;
pfam_target db:Pfam-A.hmm|PF00885.19 evalue:2.3e-57 score:192.0 best_domain_score:191.8 name:DMRL_synthase;
sprot_desc 6,7-dimethyl-8-ribityllumazine synthase;
sprot_id sp|B7GKI1|RISB_ANOFW;
sprot_target db:uniprot_sprot|sp|B7GKI1|RISB_ANOFW 1 154 evalue:2.1e-58 qcov:100.00 identity:75.30;
tigrfam_acc TIGR00114;
tigrfam_desc 6,7-dimethyl-8-ribityllumazine synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name lumazine-synth;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00114 evalue:5.5e-56 score:187.6 best_domain_score:187.4 name:TIGR00114;
100978 101640 CDS
ID metaerg.pl|04514
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192364.1 1 220 evalue:1.9e-95 qcov:100.00 identity:78.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF12710; PF13419; PF00702;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase;
pfam_id HAD; HAD_2; Hydrolase;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:9.3e-08 score:31.9 best_domain_score:31.5 name:HAD; db:Pfam-A.hmm|PF13419.6 evalue:5.2e-20 score:71.5 best_domain_score:71.1 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:1.2e-13 score:51.0 best_domain_score:50.7 name:Hydrolase;
tigrfam_acc TIGR01549;
tigrfam_desc HAD hydrolase, family IA, variant 1;
tigrfam_mainrole Unknown function;
tigrfam_name HAD-SF-IA-v1;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01549 evalue:1.3e-09 score:37.7 best_domain_score:22.9 name:TIGR01549;
102420 101692 CDS
ID metaerg.pl|04515
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192367.1 3 242 evalue:2.3e-113 qcov:99.20 identity:83.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
tm_num 7;
102420 101692 transmembrane_helix
ID metaerg.pl|04516
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology o101701-101769i101788-101844o101902-101961i102022-102090o102118-102171i102205-102258o102361-102414i;
102601 103506 CDS
ID metaerg.pl|04517
allgo_ids GO:0016020; GO:0030001; GO:0046873; GO:0055085;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192369.1 1 301 evalue:1.4e-112 qcov:100.00 identity:68.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF01544;
pfam_desc CorA-like Mg2+ transporter protein;
pfam_id CorA;
pfam_target db:Pfam-A.hmm|PF01544.18 evalue:3.1e-28 score:98.2 best_domain_score:97.8 name:CorA;
tm_num 2;
102601 103506 transmembrane_helix
ID metaerg.pl|04518
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i103336-103404o103417-103485i;
104741 103920 CDS
ID metaerg.pl|04519
allec_ids 1.1.1.346;
allgo_ids GO:0005829; GO:0008106; GO:0004032; GO:0016491; GO:0019853; GO:0051596;
allko_ids K06221;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192374.1 1 273 evalue:1.4e-140 qcov:100.00 identity:89.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF00248;
pfam_desc Aldo/keto reductase family;
pfam_id Aldo_ket_red;
pfam_target db:Pfam-A.hmm|PF00248.21 evalue:6.5e-49 score:165.9 best_domain_score:162.7 name:Aldo_ket_red;
sprot_desc 2,5-diketo-D-gluconic acid reductase A;
sprot_id sp|Q8ZI40|DKGA_YERPE;
sprot_target db:uniprot_sprot|sp|Q8ZI40|DKGA_YERPE 10 273 evalue:1.1e-57 qcov:96.70 identity:41.90;
105004 106203 CDS
ID metaerg.pl|04520
allgo_ids GO:0016021; GO:0055085; GO:0005886; GO:0022857; GO:0031669;
allko_ids K08219; K08217; K02575; K08177; K08187;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192376.1 1 387 evalue:1.8e-192 qcov:97.00 identity:89.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:9.5e-31 score:106.2 best_domain_score:65.2 name:MFS_1;
sprot_desc Uncharacterized MFS-type transporter YhjX;
sprot_id sp|P37662|YHJX_ECOLI;
sprot_target db:uniprot_sprot|sp|P37662|YHJX_ECOLI 7 346 evalue:6.3e-51 qcov:85.20 identity:33.10;
tm_num 11;
105004 106203 transmembrane_helix
ID metaerg.pl|04521
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i105037-105093o105136-105189i105223-105291o105301-105369i105403-105471o105634-105702i105721-105789o105832-105891i105910-105978o106021-106080i106099-106158o;
106340 106564 CDS
ID metaerg.pl|04522
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481609.1 1 74 evalue:1.4e-29 qcov:100.00 identity:91.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
106975 107652 CDS
ID metaerg.pl|04523
allec_ids 2.5.1.32;
allgo_ids GO:0031969; GO:0010287; GO:0004310; GO:0016767; GO:0046905; GO:0051996; GO:0016117; GO:0006696;
allko_ids K02291;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192382.1 1 220 evalue:2.3e-96 qcov:97.80 identity:79.50;
kegg_pathway_id 00906;
kegg_pathway_name Carotenoid biosynthesis - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5942; PWY-6287; CAROTENOID-PWY; PWY-6475;
metacyc_pathway_name trans-lycopene biosynthesis I;; neurosporene biosynthesis;; superpathway of carotenoid biosynthesis in plants;; trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria);;
metacyc_pathway_type Lycopene-Biosynthesis; Super-Pathways;; C40-Carotenoids-Biosynthesis;; C40-Carotenoids-Biosynthesis; Super-Pathways;; Lycopene-Biosynthesis;;
pfam_acc PF00494;
pfam_desc Squalene/phytoene synthase;
pfam_id SQS_PSY;
pfam_target db:Pfam-A.hmm|PF00494.19 evalue:3e-50 score:170.4 best_domain_score:170.0 name:SQS_PSY;
sprot_desc Phytoene synthase 2, chloroplastic;
sprot_id sp|Q2QLV9|PSY2_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q2QLV9|PSY2_ORYSJ 24 211 evalue:4.7e-27 qcov:83.60 identity:34.70;
107689 108363 CDS
ID metaerg.pl|04524
allec_ids 1.14.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0016117; GO:0009405;
allko_ids K03388; K10210;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192385.1 7 225 evalue:2.0e-103 qcov:97.30 identity:82.60;
kegg_pathway_id 00790; 00906;
kegg_pathway_name Folate biosynthesis; Carotenoid biosynthesis - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
metacyc_pathway_id PWY-5362; PWY-5367; PWY-5947; PWY-5942; PWY-782; PWY-5944; PWY-6287; PWY-762; CAROTENOID-PWY; PWY-6475; PWY-5397; 4TOLCARBDEG-PWY; PWY-5366; PWY-5987; PWY-5175; PWY-5288; TOLSULFDEG-PWY;
metacyc_pathway_name sapienate biosynthesis;; petroselinate biosynthesis;; lutein biosynthesis;; trans-lycopene biosynthesis I;; glycolipid desaturation;; zeaxanthin biosynthesis;; neurosporene biosynthesis;; phospholipid desaturation;; superpathway of carotenoid biosynthesis in plants;; trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria);; crocetin biosynthesis;; 4-toluenecarboxylate degradation;; palmitoleate biosynthesis II (plants and bacteria);; sorgoleone biosynthesis;; lactucaxanthin biosynthesis;; astaxanthin biosynthesis (bacteria, fungi, algae);; 4-toluenesulfonate degradation I;;
metacyc_pathway_type Unsaturated-Fatty-Acids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Lycopene-Biosynthesis; Super-Pathways;; Glycolipids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Phospholipid-Biosynthesis;; C40-Carotenoids-Biosynthesis; Super-Pathways;; Lycopene-Biosynthesis;; APOCAROTENOID-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;; Palmitoleate-Biosynthesis;; QUINONE-SYN;; C40-Carotenoids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; 4-Toluenesulfonate-Degradation;;
pfam_acc PF01593; PF00890; PF12831; PF01134; PF03486; PF13450; PF00070; PF07992;
pfam_desc Flavin containing amine oxidoreductase; FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; FAD_binding_2; FAD_oxidored; GIDA; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:9.2e-11 score:40.9 best_domain_score:40.8 name:Amino_oxidase; db:Pfam-A.hmm|PF00890.24 evalue:1.9e-08 score:33.1 best_domain_score:32.6 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:2.7e-09 score:36.1 best_domain_score:35.9 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:6.2e-07 score:28.1 best_domain_score:27.3 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:1.8e-07 score:29.5 best_domain_score:28.9 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:3.7e-16 score:58.4 best_domain_score:57.1 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:8.4e-05 score:22.3 best_domain_score:21.3 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:2.1e-08 score:33.0 best_domain_score:32.6 name:Pyr_redox_2;
sp YES;
sprot_desc 4,4'-diaponeurosporene oxygenase;
sprot_id sp|Q2YWE5|CRTP_STAAB;
sprot_target db:uniprot_sprot|sp|Q2YWE5|CRTP_STAAB 12 225 evalue:5.6e-73 qcov:95.10 identity:58.90;
tm_num 1;
107689 107775 signal_peptide
ID metaerg.pl|04525
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
107689 108363 transmembrane_helix
ID metaerg.pl|04526
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 17.0481; ; 0.0027076; 17.0508; ;
topology i107722-107775o;
>Feature NODE_26_length_107940_cov_14.9221
1243 77 CDS
ID metaerg.pl|04527
allko_ids K07550;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__PHEG01;s__PHEG01 sp002842835;
genomedb_acc GCA_002842835.1;
genomedb_target db:genomedb|GCA_002842835.1|PKP82279.1 1 386 evalue:2.9e-179 qcov:99.50 identity:80.60;
kegg_pathway_id 00632;
kegg_pathway_name Benzoate degradation via CoA ligation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
2846 1245 CDS
ID metaerg.pl|04528
allec_ids 6.2.1.26;
allgo_ids GO:0003824; GO:0005524; GO:0008756; GO:0009234;
allko_ids K01909; K01904; K01895; K01897; K01652; K00143; K03367; K01776; K01779; K02364; K00992; K05939; K01586; K01911;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105320228.1 1 533 evalue:1.3e-225 qcov:100.00 identity:73.60;
kegg_pathway_id 00473; 00252; 00251; 00660; 00471; 00071; 00130; 00310; 00010; 00564; 00290; 00770; 01053; 00620; 00640; 00650; 00300; 00720; 00940;
kegg_pathway_name D-Alanine metabolism; Alanine and aspartate metabolism; Glutamate metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid metabolism; Ubiquinone biosynthesis; Lysine degradation; Glycolysis / Gluconeogenesis; Glycerophospholipid metabolism; Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; Pyruvate metabolism; Propanoate metabolism; Butanoate metabolism; Lysine biosynthesis; Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id PWY-5840; PWY-5837; ALL-CHORISMATE-PWY; PWY-5897; PWY-5791; PWY-5860; PWY-5845; PWY-5862; PWY-5896; PWY-5850; PWY-5863; PWY-5899; PWY-5898; PWY-5861; PWY-5838;
metacyc_pathway_name superpathway of menaquinol-7 biosynthesis;; 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of chorismate metabolism;; superpathway of menaquinol-11 biosynthesis;; ; superpathway of demethylmenaquinol-6 biosynthesis I;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-6 biosynthesis I;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-12 biosynthesis;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-8 biosynthesis I;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; DHNA-Biosynthesis;; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; ; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:2.5e-76 score:256.2 best_domain_score:255.8 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:1.3e-16 score:60.6 best_domain_score:59.7 name:AMP-binding_C;
sprot_desc 2-succinylbenzoate--CoA ligase;
sprot_id sp|Q65FT5|MENE_BACLD;
sprot_target db:uniprot_sprot|sp|Q65FT5|MENE_BACLD 42 508 evalue:3.8e-43 qcov:87.60 identity:30.40;
3352 2849 CDS
ID metaerg.pl|04529
allgo_ids GO:0006725; GO:0055114;
allko_ids K03384;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tranquillimonas;s__Tranquillimonas alkanivorans;
genomedb_acc GCF_900115595.1;
genomedb_target db:genomedb|GCF_900115595.1|WP_093424888.1 13 167 evalue:1.3e-64 qcov:92.80 identity:76.90;
kegg_pathway_id 00361; 00623; 00364; 00624;
kegg_pathway_name gamma-Hexachlorocyclohexane degradation; 2,4-Dichlorobenzoate degradation; Fluorobenzoate degradation; 1- and 2-Methylnaphthalene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00866; PF13577;
pfam_desc Ring hydroxylating beta subunit; SnoaL-like domain;
pfam_id Ring_hydroxyl_B; SnoaL_4;
pfam_target db:Pfam-A.hmm|PF00866.18 evalue:7.4e-20 score:70.7 best_domain_score:70.4 name:Ring_hydroxyl_B; db:Pfam-A.hmm|PF13577.6 evalue:7.7e-05 score:22.1 best_domain_score:21.5 name:SnoaL_4;
4810 3458 CDS
ID metaerg.pl|04530
allec_ids 1.14.12.-;
allgo_ids GO:0016491; GO:0051537; GO:0055114; GO:0051213; GO:0005506; GO:0042203;
allko_ids K05708; K00517; K03384;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105320230.1 1 450 evalue:5.0e-223 qcov:100.00 identity:80.70;
kegg_pathway_id 00623; 00360; 00903; 00364; 00361; 00940; 00626; 00624;
kegg_pathway_name 2,4-Dichlorobenzoate degradation; Phenylalanine metabolism; Limonene and pinene degradation; Fluorobenzoate degradation; gamma-Hexachlorocyclohexane degradation; Phenylpropanoid biosynthesis; Naphthalene and anthracene degradation; 1- and 2-Methylnaphthalene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id PWY-6088; P661-PWY; 4TOLCARBDEG-PWY; DESULFONATION-PWY; P662-PWY; PWY-6533; PWY-6217; PWY-5165; PWY-6550; PWY-6216;
metacyc_pathway_name 3-chlorobenzoate degradation I (via chlorocatechol);; dibenzo-p-dioxin degradation;; 4-toluenecarboxylate degradation;; benzenesulfonate degradation;; dibenzofuran degradation;; aniline degradation;; 3,4-dichlorobenzoate degradation;; 4-toluenesulfonate degradation II;; carbazole degradation;; 3-chlorobenzoate degradation II (via protocatechuate);;
metacyc_pathway_type 3-Chlorobenzoate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; AROMATIC-COMPOUNDS-DEGRADATION;; Sulfoaromatics-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; AROMATIC-COMPOUNDS-DEGRADATION;; Chlorobenzoate-Degradation;; 4-Toluenesulfonate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; 3-Chlorobenzoate-Degradation;;
pfam_acc PF00355; PF00848;
pfam_desc Rieske [2Fe-2S] domain; Ring hydroxylating alpha subunit (catalytic domain);
pfam_id Rieske; Ring_hydroxyl_A;
pfam_target db:Pfam-A.hmm|PF00355.26 evalue:1.3e-17 score:62.7 best_domain_score:61.8 name:Rieske; db:Pfam-A.hmm|PF00848.19 evalue:7e-16 score:58.1 best_domain_score:57.5 name:Ring_hydroxyl_A;
sprot_desc Toluate 1,2-dioxygenase subunit alpha;
sprot_id sp|P23099|XYLX_PSEPU;
sprot_target db:uniprot_sprot|sp|P23099|XYLX_PSEPU 21 393 evalue:5.7e-40 qcov:82.90 identity:27.10;
5794 4829 CDS
ID metaerg.pl|04531
allec_ids 1.-.-.-;
allgo_ids GO:0009055; GO:0051536; GO:0051537; GO:0046872; GO:0019439;
allko_ids K00492; K00366; K14581; K00517; K00235; K00245; K00380; K16161; K00240; K00529; K07519;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105320231.1 8 321 evalue:9.0e-110 qcov:97.80 identity:65.70;
kegg_pathway_id 00020; 00920; 00624; 00622; 00626; 00680; 00360; 00623; 00190; 00340; 00071; 02020; 00910; 00361; 00940; 00150; 00632; 00120; 00720; 00650; 00350; 05012; 00903;
kegg_pathway_name Citrate cycle (TCA cycle); Sulfur metabolism; 1- and 2-Methylnaphthalene degradation; Toluene and xylene degradation; Naphthalene and anthracene degradation; Methane metabolism; Phenylalanine metabolism; 2,4-Dichlorobenzoate degradation; Oxidative phosphorylation; Histidine metabolism; Fatty acid metabolism; Two-component system - General; Nitrogen metabolism; gamma-Hexachlorocyclohexane degradation; Phenylpropanoid biosynthesis; Androgen and estrogen metabolism; Benzoate degradation via CoA ligation; Bile acid biosynthesis; Reductive carboxylate cycle (CO2 fixation); Butanoate metabolism; Tyrosine metabolism; Parkinson's disease; Limonene and pinene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id PWY-4302; PWY-5271; PWY-2821; PWY-5826; PWY-5469; PWY-5987; PWY-5479; PWY-6113; PWYG-321;
metacyc_pathway_name aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00111; PF00175;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase NAD-binding domain;
pfam_id Fer2; NAD_binding_1;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:4.2e-11 score:41.9 best_domain_score:41.0 name:Fer2; db:Pfam-A.hmm|PF00175.21 evalue:1.7e-09 score:37.5 best_domain_score:32.9 name:NAD_binding_1;
sprot_desc Phenoxybenzoate dioxygenase subunit beta;
sprot_id sp|Q52186|POBB_PSEOL;
sprot_target db:uniprot_sprot|sp|Q52186|POBB_PSEOL 8 321 evalue:4.4e-55 qcov:97.80 identity:40.50;
5916 6452 CDS
ID metaerg.pl|04532
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105320235.1 26 158 evalue:2.1e-36 qcov:74.70 identity:64.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF13463; PF01047; PF12802;
pfam_desc Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id HTH_27; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF13463.6 evalue:6.8e-11 score:41.8 best_domain_score:40.2 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:1.2e-13 score:50.0 best_domain_score:49.4 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:8.3e-12 score:44.1 best_domain_score:44.0 name:MarR_2;
6594 8759 CDS
ID metaerg.pl|04533
allgo_ids GO:0003824; GO:0030976;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter sp000526275;
genomedb_acc GCF_000526275.1;
genomedb_target db:genomedb|GCF_000526275.1|WP_024810419.1 1 709 evalue:0.0e+00 qcov:98.30 identity:85.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF02775;
pfam_desc Thiamine pyrophosphate enzyme, C-terminal TPP binding domain;
pfam_id TPP_enzyme_C;
pfam_target db:Pfam-A.hmm|PF02775.21 evalue:9.7e-18 score:63.6 best_domain_score:62.5 name:TPP_enzyme_C;
8866 10434 CDS
ID metaerg.pl|04534
allgo_ids GO:0016903; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter saemankumensis;
genomedb_acc GCF_900100005.1;
genomedb_target db:genomedb|GCF_900100005.1|WP_090029187.1 1 516 evalue:4.8e-185 qcov:98.90 identity:67.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01558;
pfam_desc Pyruvate ferredoxin/flavodoxin oxidoreductase;
pfam_id POR;
pfam_target db:Pfam-A.hmm|PF01558.18 evalue:5.4e-17 score:61.6 best_domain_score:61.1 name:POR;
12147 10510 CDS
ID metaerg.pl|04535
allko_ids K11066; K01447; K01449; K01185; K01448;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05503.1 1 545 evalue:8.0e-151 qcov:100.00 identity:54.10;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01471; PF08823;
pfam_desc Putative peptidoglycan binding domain; Putative peptidoglycan binding domain;
pfam_id PG_binding_1; PG_binding_2;
pfam_target db:Pfam-A.hmm|PF01471.18 evalue:2.6e-26 score:90.8 best_domain_score:51.1 name:PG_binding_1; db:Pfam-A.hmm|PF08823.11 evalue:1e-08 score:34.6 best_domain_score:17.8 name:PG_binding_2;
sp YES;
tm_num 1;
10510 10569 signal_peptide
ID metaerg.pl|04536
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
12147 10510 transmembrane_helix
ID metaerg.pl|04537
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i10522-10590o;
13577 15073 CDS
ID metaerg.pl|04538
allgo_ids GO:0005525; GO:0006614; GO:0048500; GO:0008312; GO:0003924;
allko_ids K03106;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068301697.1 1 498 evalue:1.3e-232 qcov:100.00 identity:88.30;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01656; PF00448; PF02881; PF02978; PF06414;
pfam_desc CobQ/CobB/MinD/ParA nucleotide binding domain; SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; Zeta toxin;
pfam_id CbiA; SRP54; SRP54_N; SRP_SPB; Zeta_toxin;
pfam_target db:Pfam-A.hmm|PF01656.23 evalue:2.4e-08 score:33.3 best_domain_score:30.3 name:CbiA; db:Pfam-A.hmm|PF00448.22 evalue:4.4e-67 score:224.7 best_domain_score:223.7 name:SRP54; db:Pfam-A.hmm|PF02881.19 evalue:2.5e-18 score:65.3 best_domain_score:63.7 name:SRP54_N; db:Pfam-A.hmm|PF02978.19 evalue:3.5e-27 score:94.2 best_domain_score:94.2 name:SRP_SPB; db:Pfam-A.hmm|PF06414.12 evalue:2e-05 score:23.2 best_domain_score:21.9 name:Zeta_toxin;
sprot_desc Signal recognition particle protein;
sprot_id sp|P0AGD9|SRP54_ECO57;
sprot_target db:uniprot_sprot|sp|P0AGD9|SRP54_ECO57 1 450 evalue:2.0e-99 qcov:90.40 identity:46.20;
tigrfam_acc TIGR00959;
tigrfam_desc signal recognition particle protein;
tigrfam_mainrole Protein fate;
tigrfam_name ffh;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00959 evalue:9.9e-169 score:560.8 best_domain_score:560.6 name:TIGR00959;
15102 15398 CDS
ID metaerg.pl|04539
allec_ids 5.4.99.5;
allgo_ids GO:0046417;
allko_ids K14187; K14170; K04092; K03856; K04093; K13853; K01713; K01850; K04516; K04518;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Cereibacter;s__Cereibacter changlensis;
genomedb_acc GCF_003034985.1;
genomedb_target db:genomedb|GCF_003034985.1|WP_107662111.1 1 97 evalue:6.1e-41 qcov:99.00 identity:88.70;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id TYRSYN; PWY-3462; PWY-3481; COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; PHESYN; PWY-6120; PWY-3461;
metacyc_pathway_name L-tyrosine biosynthesis I;; L-phenylalanine biosynthesis II;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; L-phenylalanine biosynthesis I;; L-tyrosine biosynthesis III;; L-tyrosine biosynthesis II;;
metacyc_pathway_type TYROSINE-SYN;; PHENYLALANINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; PHENYLALANINE-SYN;; TYROSINE-SYN;; TYROSINE-SYN;;
pfam_acc PF01817;
pfam_desc Chorismate mutase type II;
pfam_id CM_2;
pfam_target db:Pfam-A.hmm|PF01817.21 evalue:6.1e-16 score:57.8 best_domain_score:57.5 name:CM_2;
tigrfam_acc TIGR01795;
tigrfam_desc chorismate mutase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name CM_mono_cladeE;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01795 evalue:3.4e-35 score:119.7 best_domain_score:119.5 name:TIGR01795;
15465 15818 CDS
ID metaerg.pl|04540
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02959;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072244250.1 1 114 evalue:5.2e-47 qcov:97.40 identity:87.70;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00886;
pfam_desc Ribosomal protein S16;
pfam_id Ribosomal_S16;
pfam_target db:Pfam-A.hmm|PF00886.19 evalue:8.4e-27 score:92.3 best_domain_score:91.3 name:Ribosomal_S16;
sprot_desc 30S ribosomal protein S16;
sprot_id sp|A4WNX7|RS16_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WNX7|RS16_RHOS5 1 115 evalue:2.4e-43 qcov:98.30 identity:77.40;
tigrfam_acc TIGR00002;
tigrfam_desc ribosomal protein bS16;
tigrfam_mainrole Protein synthesis;
tigrfam_name S16;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00002 evalue:1.1e-31 score:107.9 best_domain_score:107.3 name:TIGR00002;
15916 16419 CDS
ID metaerg.pl|04541
allgo_ids GO:0006364; GO:0005840; GO:0043022; GO:0042274;
allko_ids K02860;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109534565.1 3 167 evalue:5.1e-64 qcov:98.80 identity:73.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF05239; PF01782;
pfam_desc PRC-barrel domain; RimM N-terminal domain;
pfam_id PRC; RimM;
pfam_target db:Pfam-A.hmm|PF05239.16 evalue:1.2e-08 score:34.2 best_domain_score:33.5 name:PRC; db:Pfam-A.hmm|PF01782.18 evalue:1.4e-17 score:62.9 best_domain_score:62.4 name:RimM;
sprot_desc Ribosome maturation factor RimM;
sprot_id sp|Q28UE7|RIMM_JANSC;
sprot_target db:uniprot_sprot|sp|Q28UE7|RIMM_JANSC 4 167 evalue:9.4e-57 qcov:98.20 identity:64.20;
tigrfam_acc TIGR02273;
tigrfam_desc 16S rRNA processing protein RimM;
tigrfam_mainrole Transcription;
tigrfam_name 16S_RimM;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR02273 evalue:6e-40 score:135.5 best_domain_score:135.4 name:TIGR02273;
16574 17398 CDS
ID metaerg.pl|04542
allec_ids 2.1.1.228;
allgo_ids GO:0005737; GO:0052906;
allko_ids K00554;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodovulum;s__Rhodovulum sulfidophilum_A;
genomedb_acc GCF_001941715.1;
genomedb_target db:genomedb|GCF_001941715.1|WP_075784771.1 12 266 evalue:5.0e-109 qcov:93.10 identity:76.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01746;
pfam_desc tRNA (Guanine-1)-methyltransferase;
pfam_id tRNA_m1G_MT;
pfam_target db:Pfam-A.hmm|PF01746.21 evalue:8e-53 score:178.3 best_domain_score:178.0 name:tRNA_m1G_MT;
sprot_desc tRNA (guanine-N(1)-)-methyltransferase;
sprot_id sp|B9KNX7|TRMD_RHOSK;
sprot_target db:uniprot_sprot|sp|B9KNX7|TRMD_RHOSK 37 266 evalue:4.4e-96 qcov:83.90 identity:72.30;
tigrfam_acc TIGR00088;
tigrfam_desc tRNA (guanine(37)-N(1))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name trmD;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00088 evalue:5e-76 score:254.2 best_domain_score:253.8 name:TIGR00088;
17451 18104 CDS
ID metaerg.pl|04543
allgo_ids GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Aestuariivita;s__Aestuariivita boseongensis;
genomedb_acc GCF_001262635.1;
genomedb_target db:genomedb|GCF_001262635.1|WP_050928783.1 22 216 evalue:3.0e-56 qcov:89.90 identity:60.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF03472; PF00196;
pfam_desc Autoinducer binding domain; Bacterial regulatory proteins, luxR family;
pfam_id Autoind_bind; GerE;
pfam_target db:Pfam-A.hmm|PF03472.15 evalue:8.7e-05 score:21.3 best_domain_score:20.4 name:Autoind_bind; db:Pfam-A.hmm|PF00196.19 evalue:6.2e-08 score:31.3 best_domain_score:30.7 name:GerE;
18256 19242 CDS
ID metaerg.pl|04544
allec_ids 3.5.5.1;
allgo_ids GO:0006807; GO:0080109; GO:0000257; GO:0019500; GO:0019499; GO:0051260;
allko_ids K01502;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Amorphaceae;g__Amorphus;s__Amorphus coralli;
genomedb_acc GCF_000374525.1;
genomedb_target db:genomedb|GCF_000374525.1|WP_018698117.1 1 328 evalue:1.7e-148 qcov:100.00 identity:78.20;
kegg_pathway_id 00643;
kegg_pathway_name Styrene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id PWY-5026;
metacyc_pathway_name indole-3-acetate biosynthesis V (bacteria and fungi);;
metacyc_pathway_type Auxin-Biosynthesis;;
pfam_acc PF00795;
pfam_desc Carbon-nitrogen hydrolase;
pfam_id CN_hydrolase;
pfam_target db:Pfam-A.hmm|PF00795.22 evalue:4.1e-45 score:153.4 best_domain_score:153.1 name:CN_hydrolase;
sprot_desc Nitrilase bll6402;
sprot_id sp|Q89GE3|NITR1_BRADU;
sprot_target db:uniprot_sprot|sp|Q89GE3|NITR1_BRADU 3 301 evalue:5.3e-72 qcov:91.20 identity:45.20;
19239 19898 CDS
ID metaerg.pl|04545
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Amorphaceae;g__Amorphus;s__Amorphus coralli;
genomedb_acc GCF_000374525.1;
genomedb_target db:genomedb|GCF_000374525.1|WP_018698118.1 3 219 evalue:2.1e-86 qcov:99.10 identity:72.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01243;
pfam_desc Pyridoxamine 5'-phosphate oxidase;
pfam_id Putative_PNPOx;
pfam_target db:Pfam-A.hmm|PF01243.20 evalue:7.8e-15 score:54.1 best_domain_score:53.2 name:Putative_PNPOx;
20212 20607 CDS
ID metaerg.pl|04546
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02884;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479911.1 1 126 evalue:4.7e-57 qcov:96.20 identity:91.30;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01245;
pfam_desc Ribosomal protein L19;
pfam_id Ribosomal_L19;
pfam_target db:Pfam-A.hmm|PF01245.20 evalue:5.2e-48 score:160.8 best_domain_score:160.7 name:Ribosomal_L19;
sprot_desc 50S ribosomal protein L19;
sprot_id sp|A8LMB3|RL19_DINSH;
sprot_target db:uniprot_sprot|sp|A8LMB3|RL19_DINSH 1 121 evalue:9.6e-57 qcov:92.40 identity:90.90;
tigrfam_acc TIGR01024;
tigrfam_desc ribosomal protein bL19;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplS_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01024 evalue:4.4e-46 score:154.8 best_domain_score:154.7 name:TIGR01024;
20619 20840 CDS
ID metaerg.pl|04547
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02909;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05824.1 1 73 evalue:2.2e-32 qcov:100.00 identity:91.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01197;
pfam_desc Ribosomal protein L31;
pfam_id Ribosomal_L31;
pfam_target db:Pfam-A.hmm|PF01197.18 evalue:3.4e-21 score:74.5 best_domain_score:74.4 name:Ribosomal_L31;
sprot_desc 50S ribosomal protein L31;
sprot_id sp|Q16AP4|RL31_ROSDO;
sprot_target db:uniprot_sprot|sp|Q16AP4|RL31_ROSDO 1 73 evalue:8.6e-31 qcov:100.00 identity:80.80;
tigrfam_acc TIGR00105;
tigrfam_desc ribosomal protein bL31;
tigrfam_mainrole Protein synthesis;
tigrfam_name L31;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00105 evalue:4.3e-28 score:96.4 best_domain_score:96.3 name:TIGR00105;
20949 21815 CDS
ID metaerg.pl|04548
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_C;s__Rhodobacter_C vinaykumarii;
genomedb_acc GCF_900156695.1;
genomedb_target db:genomedb|GCF_900156695.1|WP_083947777.1 1 279 evalue:1.4e-106 qcov:96.90 identity:71.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF13614; PF01656; PF09140; PF10609;
pfam_desc AAA domain; CobQ/CobB/MinD/ParA nucleotide binding domain; ATPase MipZ; NUBPL iron-transfer P-loop NTPase;
pfam_id AAA_31; CbiA; MipZ; ParA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:6e-13 score:48.3 best_domain_score:37.6 name:AAA_31; db:Pfam-A.hmm|PF01656.23 evalue:1.8e-10 score:40.2 best_domain_score:39.8 name:CbiA; db:Pfam-A.hmm|PF09140.11 evalue:2.1e-117 score:390.3 best_domain_score:390.1 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:2e-10 score:39.7 best_domain_score:38.6 name:ParA;
22169 23698 CDS
ID metaerg.pl|04549
allgo_ids GO:0018298;
allko_ids K01669;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05827.1 1 509 evalue:2.2e-190 qcov:100.00 identity:68.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00875; PF03441;
pfam_desc DNA photolyase; FAD binding domain of DNA photolyase;
pfam_id DNA_photolyase; FAD_binding_7;
pfam_target db:Pfam-A.hmm|PF00875.18 evalue:7.2e-28 score:96.9 best_domain_score:95.6 name:DNA_photolyase; db:Pfam-A.hmm|PF03441.14 evalue:3.1e-56 score:189.3 best_domain_score:188.8 name:FAD_binding_7;
sprot_desc Cryptochrome-like protein cry2;
sprot_id sp|Q9KS67|CRY2_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KS67|CRY2_VIBCH 2 495 evalue:2.5e-84 qcov:97.10 identity:38.80;
24098 24898 CDS
ID metaerg.pl|04550
allec_ids 2.4.2.-;
allgo_ids GO:0016787; GO:0033969; GO:0016740; GO:0006541;
allko_ids K07010;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797009.1 1 250 evalue:1.3e-122 qcov:94.00 identity:81.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id HISTSYN-PWY; PRPP-PWY; PWY-5800; PWY-5381;
metacyc_pathway_name L-histidine biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;; xylan biosynthesis;; pyridine nucleotide cycling (plants);;
metacyc_pathway_type HISTIDINE-SYN;; Super-Pathways;; SECONDARY-CELL-WALL;; NAD-Metabolism;;
pfam_acc PF00117; PF07722;
pfam_desc Glutamine amidotransferase class-I; Peptidase C26;
pfam_id GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00117.28 evalue:8.5e-11 score:41.2 best_domain_score:40.2 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:1e-60 score:204.4 best_domain_score:204.2 name:Peptidase_C26;
sprot_desc Putative glutamine amidotransferase Rv2859c;
sprot_id sp|O33341|Y2859_MYCTU;
sprot_target db:uniprot_sprot|sp|O33341|Y2859_MYCTU 30 255 evalue:4.2e-19 qcov:85.00 identity:34.60;
25423 24947 CDS
ID metaerg.pl|04551
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06899.1 5 149 evalue:1.6e-59 qcov:91.80 identity:75.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00188;
pfam_desc Cysteine-rich secretory protein family;
pfam_id CAP;
pfam_target db:Pfam-A.hmm|PF00188.26 evalue:2.5e-13 score:50.2 best_domain_score:49.9 name:CAP;
27199 26108 CDS
ID metaerg.pl|04552
allec_ids 4.99.1.1;
allgo_ids GO:0009236; GO:0016852; GO:0005737; GO:0004325; GO:0046872; GO:0006783;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657466.1 1 362 evalue:1.1e-175 qcov:99.70 identity:80.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id PWY-5920; PWY-5918; PWY0-1415; HEME-BIOSYNTHESIS-II; HEMESYN2-PWY;
metacyc_pathway_name superpathway of b heme biosynthesis from glycine;; superpathay of heme b biosynthesis from glutamate;; superpathway of heme b biosynthesis from uroporphyrinogen-III;; heme b biosynthesis I (aerobic);; heme b biosynthesis II (anaerobic);;
metacyc_pathway_type Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis;; Heme-b-Biosynthesis;;
pfam_acc PF01903; PF00762;
pfam_desc CbiX; Ferrochelatase;
pfam_id CbiX; Ferrochelatase;
pfam_target db:Pfam-A.hmm|PF01903.17 evalue:2.3e-07 score:30.3 best_domain_score:14.0 name:CbiX; db:Pfam-A.hmm|PF00762.19 evalue:1.1e-109 score:365.6 best_domain_score:365.5 name:Ferrochelatase;
sprot_desc Ferrochelatase;
sprot_id sp|Q59735|HEMH_RHOCA;
sprot_target db:uniprot_sprot|sp|Q59735|HEMH_RHOCA 21 361 evalue:3.0e-156 qcov:93.90 identity:75.10;
tigrfam_acc TIGR00109;
tigrfam_desc ferrochelatase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemH;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00109 evalue:2.6e-87 score:292.4 best_domain_score:292.2 name:TIGR00109;
28117 27251 CDS
ID metaerg.pl|04553
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE48178.1 2 277 evalue:1.1e-98 qcov:95.80 identity:69.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF08241;
pfam_desc Methyltransferase domain;
pfam_id Methyltransf_11;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:5.1e-05 score:23.1 best_domain_score:21.9 name:Methyltransf_11;
28175 28930 CDS
ID metaerg.pl|04554
allgo_ids GO:0009116; GO:0015976; GO:0006308;
allko_ids K00762;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06894.1 5 249 evalue:4.0e-89 qcov:97.60 identity:66.10;
kegg_pathway_id 00240; 00983;
kegg_pathway_name Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:2.4e-07 score:29.6 best_domain_score:29.0 name:Pribosyltran;
sprot_desc DNA utilization protein YhgH;
sprot_id sp|P46846|GNTX_ECOLI;
sprot_target db:uniprot_sprot|sp|P46846|GNTX_ECOLI 26 248 evalue:7.8e-15 qcov:88.80 identity:31.90;
29037 29306 CDS
ID metaerg.pl|04555
allgo_ids GO:0009055; GO:0015035; GO:0045454; GO:0005623; GO:0009263;
allko_ids K03676;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseivivax;s__Roseivivax lentus;
genomedb_acc GCF_900156805.1;
genomedb_target db:genomedb|GCF_900156805.1|WP_076444085.1 1 84 evalue:1.6e-32 qcov:94.40 identity:79.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00462;
pfam_desc Glutaredoxin;
pfam_id Glutaredoxin;
pfam_target db:Pfam-A.hmm|PF00462.24 evalue:2.2e-20 score:71.8 best_domain_score:71.6 name:Glutaredoxin;
sprot_desc Glutaredoxin 3;
sprot_id sp|P0AC64|GLRX3_ECO57;
sprot_target db:uniprot_sprot|sp|P0AC64|GLRX3_ECO57 1 83 evalue:7.5e-21 qcov:93.30 identity:55.40;
tigrfam_acc TIGR02181;
tigrfam_desc glutaredoxin 3;
tigrfam_mainrole Energy metabolism;
tigrfam_name GRX_bact;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02181 evalue:6.1e-33 score:112.1 best_domain_score:111.9 name:TIGR02181;
29310 30152 CDS
ID metaerg.pl|04556
allec_ids 3.5.1.128;
allgo_ids GO:0006807; GO:0016787;
allko_ids K03820;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE48266.1 1 278 evalue:4.9e-112 qcov:99.30 identity:73.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00795;
pfam_desc Carbon-nitrogen hydrolase;
pfam_id CN_hydrolase;
pfam_target db:Pfam-A.hmm|PF00795.22 evalue:3.2e-46 score:157.0 best_domain_score:156.8 name:CN_hydrolase;
sprot_desc Deaminated glutathione amidase;
sprot_id sp|P0DP68|NIT1_YEREN;
sprot_target db:uniprot_sprot|sp|P0DP68|NIT1_YEREN 4 271 evalue:1.5e-46 qcov:95.70 identity:41.00;
30149 30601 CDS
ID metaerg.pl|04557
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06891.1 6 149 evalue:1.3e-58 qcov:96.00 identity:81.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF13463; PF01047; PF12802;
pfam_desc Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id HTH_27; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF13463.6 evalue:1.9e-06 score:27.5 best_domain_score:25.7 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:2.9e-06 score:26.3 best_domain_score:25.0 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:5.3e-11 score:41.5 best_domain_score:36.7 name:MarR_2;
31441 30737 CDS
ID metaerg.pl|04558
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05790.1 1 234 evalue:3.8e-89 qcov:100.00 identity:78.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
tm_num 2;
31441 30737 transmembrane_helix
ID metaerg.pl|04559
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i30791-30850o31004-31072i;
31706 31413 CDS
ID metaerg.pl|04560
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter aquatilis;
genomedb_acc GCF_900110025.1;
genomedb_target db:genomedb|GCF_900110025.1|WP_091302326.1 2 97 evalue:3.1e-21 qcov:99.00 identity:55.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
sp YES;
31413 31478 signal_peptide
ID metaerg.pl|04561
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
31900 31703 CDS
ID metaerg.pl|04562
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
32085 32720 CDS
ID metaerg.pl|04563
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05789.1 2 211 evalue:2.6e-49 qcov:99.50 identity:52.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
sp YES;
tm_num 2;
32085 32165 signal_peptide
ID metaerg.pl|04564
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
32085 32720 transmembrane_helix
ID metaerg.pl|04565
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i32097-32165o32175-32228i;
32958 33611 CDS
ID metaerg.pl|04566
allec_ids 3.1.26.4;
allgo_ids GO:0005737; GO:0030145; GO:0003723; GO:0004523; GO:0006401;
allko_ids K03470;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092884842.1 11 215 evalue:1.2e-65 qcov:94.50 identity:66.50;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01351;
pfam_desc Ribonuclease HII;
pfam_id RNase_HII;
pfam_target db:Pfam-A.hmm|PF01351.18 evalue:8.7e-42 score:142.4 best_domain_score:142.2 name:RNase_HII;
sprot_desc Ribonuclease HII;
sprot_id sp|A1B3V0|RNH2_PARDP;
sprot_target db:uniprot_sprot|sp|A1B3V0|RNH2_PARDP 15 212 evalue:1.2e-64 qcov:91.20 identity:65.80;
33728 34837 CDS
ID metaerg.pl|04567
allec_ids 2.1.1.72;
allgo_ids GO:0003677; GO:0006306; GO:0008170; GO:0009007; GO:0006260;
allko_ids K13581;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05787.1 1 369 evalue:2.1e-179 qcov:100.00 identity:79.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01555; PF18755;
pfam_desc DNA methylase; Restriction Enzyme Adenine Methylase Associated;
pfam_id N6_N4_Mtase; RAMA;
pfam_target db:Pfam-A.hmm|PF01555.18 evalue:8.6e-56 score:188.5 best_domain_score:188.1 name:N6_N4_Mtase; db:Pfam-A.hmm|PF18755.1 evalue:1.5e-20 score:72.8 best_domain_score:71.1 name:RAMA;
sprot_desc Modification methylase CcrMI;
sprot_id sp|P0CAW2|MTC1_CAUVC;
sprot_target db:uniprot_sprot|sp|P0CAW2|MTC1_CAUVC 18 365 evalue:1.2e-136 qcov:94.30 identity:65.10;
35061 36035 CDS
ID metaerg.pl|04568
allec_ids 1.8.5.7;
allgo_ids GO:0005515; GO:0004364; GO:0016672;
allko_ids K07393;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479205.1 1 323 evalue:8.4e-156 qcov:99.70 identity:79.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF13410; PF13409;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C_2; GST_N_2;
pfam_target db:Pfam-A.hmm|PF13410.6 evalue:1.3e-13 score:49.9 best_domain_score:48.4 name:GST_C_2; db:Pfam-A.hmm|PF13409.6 evalue:5.5e-22 score:77.1 best_domain_score:75.8 name:GST_N_2;
sprot_desc Glutathionyl-hydroquinone reductase YqjG;
sprot_id sp|P42620|YQJG_ECOLI;
sprot_target db:uniprot_sprot|sp|P42620|YQJG_ECOLI 1 323 evalue:3.2e-117 qcov:99.70 identity:62.80;
36158 37354 CDS
ID metaerg.pl|04569
allec_ids 2.4.-.-;
allko_ids K01448;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07404.1 16 398 evalue:7.4e-162 qcov:96.20 identity:71.30;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id LIPA-CORESYN-PWY; LPSSYN-PWY;
metacyc_pathway_name lipid A-core biosynthesis (E. coli K-12);; superpathway of lipopolysaccharide biosynthesis;;
metacyc_pathway_type Glycan-Biosynthesis; Lipid-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;;
pfam_acc PF01471; PF13406;
pfam_desc Putative peptidoglycan binding domain; Transglycosylase SLT domain;
pfam_id PG_binding_1; SLT_2;
pfam_target db:Pfam-A.hmm|PF01471.18 evalue:1.1e-12 score:47.2 best_domain_score:46.0 name:PG_binding_1; db:Pfam-A.hmm|PF13406.6 evalue:7.6e-83 score:277.3 best_domain_score:277.0 name:SLT_2;
sp YES;
tigrfam_acc TIGR02283;
tigrfam_desc lytic murein transglycosylase;
tigrfam_mainrole Cell envelope;
tigrfam_name MltB_2;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR02283 evalue:1.6e-89 score:299.3 best_domain_score:299.0 name:TIGR02283;
36158 36232 signal_peptide
ID metaerg.pl|04570
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
37480 38460 CDS
ID metaerg.pl|04571
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia;s__Devosia geojensis;
genomedb_acc GCF_000969415.1;
genomedb_target db:genomedb|GCF_000969415.1|WP_046110314.1 1 325 evalue:2.3e-121 qcov:99.70 identity:76.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF05982;
pfam_desc Na+-dependent bicarbonate transporter superfamily;
pfam_id Sbt_1;
pfam_target db:Pfam-A.hmm|PF05982.12 evalue:1.6e-105 score:352.0 best_domain_score:351.9 name:Sbt_1;
tm_num 9;
37480 38460 transmembrane_helix
ID metaerg.pl|04572
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i37498-37566o37681-37749i37786-37854o37882-37941i37978-38046o38074-38142i38179-38247o38275-38343i38362-38430o;
38464 38775 CDS
ID metaerg.pl|04573
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia;s__Devosia geojensis;
genomedb_acc GCF_000969415.1;
genomedb_target db:genomedb|GCF_000969415.1|WP_046110250.1 1 103 evalue:1.2e-34 qcov:100.00 identity:69.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
38854 39195 CDS
ID metaerg.pl|04574
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795798.1 1 112 evalue:7.2e-46 qcov:99.10 identity:83.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF11015;
pfam_desc Protein of unknown function (DUF2853);
pfam_id DUF2853;
pfam_target db:Pfam-A.hmm|PF11015.8 evalue:4.5e-42 score:142.1 best_domain_score:141.9 name:DUF2853;
39579 39259 CDS
ID metaerg.pl|04575
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109534617.1 1 104 evalue:4.5e-34 qcov:98.10 identity:67.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF03992;
pfam_desc Antibiotic biosynthesis monooxygenase;
pfam_id ABM;
pfam_target db:Pfam-A.hmm|PF03992.16 evalue:3.5e-12 score:45.5 best_domain_score:45.3 name:ABM;
40428 39832 CDS
ID metaerg.pl|04576
allgo_ids GO:0006865; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797735.1 1 194 evalue:1.1e-62 qcov:98.00 identity:64.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01810;
pfam_desc LysE type translocator;
pfam_id LysE;
pfam_target db:Pfam-A.hmm|PF01810.18 evalue:6.3e-18 score:64.1 best_domain_score:63.9 name:LysE;
tm_num 5;
40428 39832 transmembrane_helix
ID metaerg.pl|04577
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i39844-39912o39955-40023i40042-40095o40252-40320i40354-40422o;
40536 40988 CDS
ID metaerg.pl|04578
allgo_ids GO:0043565; GO:0003700;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE48811.1 1 150 evalue:2.2e-58 qcov:100.00 identity:79.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01037; PF13412; PF13404;
pfam_desc Lrp/AsnC ligand binding domain; Winged helix-turn-helix DNA-binding; AsnC-type helix-turn-helix domain;
pfam_id AsnC_trans_reg; HTH_24; HTH_AsnC-type;
pfam_target db:Pfam-A.hmm|PF01037.21 evalue:3.6e-20 score:70.9 best_domain_score:70.4 name:AsnC_trans_reg; db:Pfam-A.hmm|PF13412.6 evalue:2.7e-16 score:58.1 best_domain_score:57.4 name:HTH_24; db:Pfam-A.hmm|PF13404.6 evalue:2e-12 score:46.0 best_domain_score:46.0 name:HTH_AsnC-type;
sprot_desc Leucine-responsive regulatory protein;
sprot_id sp|P56901|LRP_RHIME;
sprot_target db:uniprot_sprot|sp|P56901|LRP_RHIME 5 147 evalue:2.2e-20 qcov:95.30 identity:39.20;
43571 41040 CDS
ID metaerg.pl|04579
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0003743;
allko_ids K00955; K00860; K00956; K02519;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109531652.1 1 842 evalue:0.0e+00 qcov:99.90 identity:83.00;
kegg_pathway_id 00230; 00920; 00450;
kegg_pathway_name Purine metabolism; Sulfur metabolism; Selenoamino acid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00025; PF02421; PF00009; PF11987; PF08364; PF04760; PF01926; PF10662; PF09439;
pfam_desc ADP-ribosylation factor family; Ferrous iron transport protein B; Elongation factor Tu GTP binding domain; Translation-initiation factor 2; Bacterial translation initiation factor IF-2 associated region; Translation initiation factor IF-2, N-terminal region; 50S ribosome-binding GTPase; Ethanolamine utilisation - propanediol utilisation; Signal recognition particle receptor beta subunit;
pfam_id Arf; FeoB_N; GTP_EFTU; IF-2; IF2_assoc; IF2_N; MMR_HSR1; PduV-EutP; SRPRB;
pfam_target db:Pfam-A.hmm|PF00025.21 evalue:1.8e-06 score:26.7 best_domain_score:25.5 name:Arf; db:Pfam-A.hmm|PF02421.18 evalue:1.1e-05 score:24.2 best_domain_score:24.2 name:FeoB_N; db:Pfam-A.hmm|PF00009.27 evalue:2.3e-34 score:117.9 best_domain_score:111.3 name:GTP_EFTU; db:Pfam-A.hmm|PF11987.8 evalue:4.1e-38 score:129.0 best_domain_score:127.2 name:IF-2; db:Pfam-A.hmm|PF08364.11 evalue:9.8e-11 score:41.0 best_domain_score:39.2 name:IF2_assoc; db:Pfam-A.hmm|PF04760.15 evalue:1.8e-13 score:49.3 best_domain_score:48.2 name:IF2_N; db:Pfam-A.hmm|PF01926.23 evalue:5.6e-09 score:35.3 best_domain_score:33.7 name:MMR_HSR1; db:Pfam-A.hmm|PF10662.9 evalue:0.00015 score:20.7 best_domain_score:19.5 name:PduV-EutP; db:Pfam-A.hmm|PF09439.10 evalue:7.9e-05 score:21.4 best_domain_score:20.0 name:SRPRB;
sprot_desc Translation initiation factor IF-2;
sprot_id sp|A4WW80|IF2_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WW80|IF2_RHOS5 1 843 evalue:9.5e-299 qcov:100.00 identity:79.40;
tigrfam_acc TIGR00231; TIGR00487;
tigrfam_desc small GTP-binding protein domain; translation initiation factor IF-2;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; IF-2;
tigrfam_sub1role General; Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:1.4e-31 score:108.6 best_domain_score:107.9 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00487 evalue:1.7e-238 score:792.4 best_domain_score:791.9 name:TIGR00487;
44218 43580 CDS
ID metaerg.pl|04580
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105318831.1 1 212 evalue:2.1e-62 qcov:100.00 identity:63.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF04296;
pfam_desc Protein of unknown function (DUF448);
pfam_id DUF448;
pfam_target db:Pfam-A.hmm|PF04296.13 evalue:2.5e-20 score:71.3 best_domain_score:70.5 name:DUF448;
45995 44271 CDS
ID metaerg.pl|04581
allgo_ids GO:0003723; GO:0005737; GO:0003700; GO:0000166; GO:0006353; GO:0031564;
allko_ids K02600;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius sp002421985;
genomedb_acc GCA_002421985.1;
genomedb_target db:genomedb|GCA_002421985.1|DISF01000067.1_21 1 565 evalue:4.6e-258 qcov:98.40 identity:83.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF14520; PF07650; PF13184; PF08529;
pfam_desc Helix-hairpin-helix domain; KH domain; NusA-like KH domain; NusA N-terminal domain;
pfam_id HHH_5; KH_2; KH_5; NusA_N;
pfam_target db:Pfam-A.hmm|PF14520.6 evalue:1.1e-09 score:38.0 best_domain_score:20.0 name:HHH_5; db:Pfam-A.hmm|PF07650.17 evalue:2.5e-07 score:29.7 best_domain_score:26.4 name:KH_2; db:Pfam-A.hmm|PF13184.6 evalue:1.2e-28 score:98.2 best_domain_score:92.6 name:KH_5; db:Pfam-A.hmm|PF08529.11 evalue:4.8e-29 score:100.4 best_domain_score:98.8 name:NusA_N;
sprot_desc Transcription termination/antitermination protein NusA;
sprot_id sp|Q92HF4|NUSA_RICCN;
sprot_target db:uniprot_sprot|sp|Q92HF4|NUSA_RICCN 3 488 evalue:1.1e-115 qcov:84.70 identity:45.60;
tigrfam_acc TIGR01953; TIGR01954;
tigrfam_desc transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication;
tigrfam_mainrole Transcription; Transcription;
tigrfam_name NusA; nusA_Cterm_rpt;
tigrfam_sub1role Transcription factors; Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR01953 evalue:2.2e-121 score:404.1 best_domain_score:403.6 name:TIGR01953; db:TIGRFAMs.hmm|TIGR01954 evalue:2e-21 score:75.0 best_domain_score:70.9 name:TIGR01954;
46615 46001 CDS
ID metaerg.pl|04582
allgo_ids GO:0005737; GO:0042274;
allko_ids K09748;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109531649.1 1 204 evalue:4.7e-80 qcov:100.00 identity:75.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF02576; PF17384;
pfam_desc RimP N-terminal domain; RimP C-terminal SH3 domain;
pfam_id DUF150; DUF150_C;
pfam_target db:Pfam-A.hmm|PF02576.17 evalue:1.3e-25 score:88.8 best_domain_score:88.1 name:DUF150; db:Pfam-A.hmm|PF17384.2 evalue:4.5e-12 score:45.2 best_domain_score:44.4 name:DUF150_C;
sprot_desc Ribosome maturation factor RimP;
sprot_id sp|A4WW77|RIMP_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WW77|RIMP_RHOS5 13 204 evalue:1.4e-75 qcov:94.10 identity:77.40;
47721 46807 CDS
ID metaerg.pl|04583
allec_ids 3.4.11.5;
allgo_ids GO:0009507; GO:0005829; GO:0004177;
allko_ids K01259;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109531647.1 1 296 evalue:6.9e-136 qcov:97.40 identity:77.40;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:2.6e-23 score:82.2 best_domain_score:81.4 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:3.8e-13 score:49.8 best_domain_score:49.4 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:5.9e-09 score:34.8 best_domain_score:33.0 name:Hydrolase_4;
sprot_desc Proline iminopeptidase;
sprot_id sp|P93732|PIP_ARATH;
sprot_target db:uniprot_sprot|sp|P93732|PIP_ARATH 2 296 evalue:9.9e-81 qcov:97.00 identity:49.50;
tigrfam_acc TIGR01249;
tigrfam_desc prolyl aminopeptidase;
tigrfam_name pro_imino_pep_1;
tigrfam_target db:TIGRFAMs.hmm|TIGR01249 evalue:9.4e-102 score:339.4 best_domain_score:339.3 name:TIGR01249;
47914 48654 CDS
ID metaerg.pl|04584
allec_ids 2.1.1.222; 2.1.1.64;
allgo_ids GO:0008168; GO:0008425; GO:0008689; GO:0006744;
allko_ids K00568; K00599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__TH137;s__TH137 sp002256185;
genomedb_acc GCA_002256185.1;
genomedb_target db:genomedb|GCA_002256185.1|OYU20383.1 4 245 evalue:2.1e-122 qcov:98.40 identity:86.40;
kegg_pathway_id 00340; 00380; 00150; 00130; 00350; 00450; 00626;
kegg_pathway_name Histidine metabolism; Tryptophan metabolism; Androgen and estrogen metabolism; Ubiquinone biosynthesis; Tyrosine metabolism; Selenoamino acid metabolism; Naphthalene and anthracene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id PWY-5855; PWY-5856; PWY-5857;
metacyc_pathway_name ubiquinol-7 biosynthesis (prokaryotic);; ubiquinol-9 biosynthesis (prokaryotic);; ubiquinol-10 biosynthesis (prokaryotic);;
metacyc_pathway_type Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;;
pfam_acc PF02353; PF08241; PF08242; PF13489; PF13649; PF13847; PF08003; PF05175; PF05401; PF06325; PF01209;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Protein of unknown function (DUF1698); Methyltransferase small domain; Nodulation protein S (NodS); Ribosomal protein L11 methyltransferase (PrmA); ubiE/COQ5 methyltransferase family;
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; Methyltransf_9; MTS; NodS; PrmA; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:5.5e-09 score:34.9 best_domain_score:34.6 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:6.7e-21 score:74.0 best_domain_score:73.1 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:4.8e-13 score:48.9 best_domain_score:48.2 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:3e-24 score:84.9 best_domain_score:82.8 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.5e-16 score:60.1 best_domain_score:59.2 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.3e-16 score:60.0 best_domain_score:59.6 name:Methyltransf_31; db:Pfam-A.hmm|PF08003.11 evalue:6.2e-08 score:31.1 best_domain_score:30.7 name:Methyltransf_9; db:Pfam-A.hmm|PF05175.14 evalue:2.3e-05 score:23.2 best_domain_score:22.8 name:MTS; db:Pfam-A.hmm|PF05401.11 evalue:8.7e-05 score:21.5 best_domain_score:21.0 name:NodS; db:Pfam-A.hmm|PF06325.13 evalue:2.3e-06 score:26.4 best_domain_score:26.1 name:PrmA; db:Pfam-A.hmm|PF01209.18 evalue:2.7e-05 score:22.9 best_domain_score:21.2 name:Ubie_methyltran;
sprot_desc Ubiquinone biosynthesis O-methyltransferase;
sprot_id sp|B9KPP7|UBIG_RHOSK;
sprot_target db:uniprot_sprot|sp|B9KPP7|UBIG_RHOSK 2 245 evalue:4.5e-116 qcov:99.20 identity:79.50;
tigrfam_acc TIGR01983;
tigrfam_desc 3-demethylubiquinone-9 3-O-methyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name UbiG;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR01983 evalue:1.4e-87 score:291.9 best_domain_score:291.7 name:TIGR01983;
49107 49574 CDS
ID metaerg.pl|04585
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
sp YES;
tm_num 1;
49107 49175 signal_peptide
ID metaerg.pl|04586
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
49107 49574 transmembrane_helix
ID metaerg.pl|04587
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i49125-49184o;
49761 50129 CDS
ID metaerg.pl|04588
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
50126 51046 CDS
ID metaerg.pl|04589
allko_ids K06911;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thioclava;s__Thioclava electrotropha;
genomedb_acc GCF_002085925.1;
genomedb_target db:genomedb|GCF_002085925.1|WP_083078821.1 1 302 evalue:3.6e-164 qcov:98.70 identity:90.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF02678; PF05726;
pfam_desc Pirin; Pirin C-terminal cupin domain;
pfam_id Pirin; Pirin_C;
pfam_target db:Pfam-A.hmm|PF02678.16 evalue:9.2e-36 score:121.4 best_domain_score:117.5 name:Pirin; db:Pfam-A.hmm|PF05726.13 evalue:2.7e-28 score:97.6 best_domain_score:94.0 name:Pirin_C;
sprot_desc Pirin-like protein CC_0481;
sprot_id sp|P58112|Y481_CAUVC;
sprot_target db:uniprot_sprot|sp|P58112|Y481_CAUVC 1 298 evalue:7.0e-66 qcov:97.40 identity:45.80;
51973 51161 CDS
ID metaerg.pl|04590
allec_ids 3.1.3.18;
allgo_ids GO:0046872; GO:0008967; GO:0005975; GO:0046295;
allko_ids K01091;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudoruegeria_D;s__Pseudoruegeria_D haliotis;
genomedb_acc GCF_003003255.1;
genomedb_target db:genomedb|GCF_003003255.1|WP_106205033.1 48 264 evalue:5.9e-78 qcov:80.40 identity:68.20;
kegg_pathway_id 00630;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id PWY-181;
metacyc_pathway_name photorespiration;;
metacyc_pathway_type Photosynthesis;;
pfam_acc PF12710; PF13419; PF00702; PF08282; PF13242;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD; HAD_2; Hydrolase; Hydrolase_3; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:7.7e-11 score:42.0 best_domain_score:41.2 name:HAD; db:Pfam-A.hmm|PF13419.6 evalue:2.8e-23 score:82.1 best_domain_score:81.9 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:6.9e-08 score:32.3 best_domain_score:26.2 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:9.8e-05 score:21.4 best_domain_score:10.3 name:Hydrolase_3; db:Pfam-A.hmm|PF13242.6 evalue:5.3e-08 score:32.1 best_domain_score:31.3 name:Hydrolase_like;
sprot_desc Phosphoglycolate phosphatase;
sprot_id sp|Q9A5Z2|GPH_CAUVC;
sprot_target db:uniprot_sprot|sp|Q9A5Z2|GPH_CAUVC 48 261 evalue:1.2e-21 qcov:79.30 identity:32.90;
52566 51970 CDS
ID metaerg.pl|04591
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05515.1 2 197 evalue:3.7e-53 qcov:99.00 identity:60.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
54340 52607 CDS
ID metaerg.pl|04592
allec_ids 4.2.1.9;
allgo_ids GO:0003824; GO:0051539; GO:0004160; GO:0046872; GO:0009097; GO:0009099;
allko_ids K01687;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05514.1 1 577 evalue:0.0e+00 qcov:100.00 identity:93.40;
kegg_pathway_id 00290; 00770;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id ILEUSYN-PWY; BRANCHED-CHAIN-AA-SYN-PWY; PWY-5104; PWY-5103; THREOCAT-PWY; PWY-3001; VALSYN-PWY; PWY-5101;
metacyc_pathway_name L-isoleucine biosynthesis I (from threonine);; superpathway of branched chain amino acid biosynthesis;; L-isoleucine biosynthesis IV;; L-isoleucine biosynthesis III;; superpathway of L-threonine metabolism;; superpathway of L-isoleucine biosynthesis I;; L-valine biosynthesis;; L-isoleucine biosynthesis II;;
metacyc_pathway_type ISOLEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN; Super-Pathways;; VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;;
pfam_acc PF00920;
pfam_desc Dehydratase family;
pfam_id ILVD_EDD;
pfam_target db:Pfam-A.hmm|PF00920.21 evalue:6.8e-198 score:657.7 best_domain_score:657.5 name:ILVD_EDD;
sprot_desc Dihydroxy-acid dehydratase;
sprot_id sp|A8LKN5|ILVD_DINSH;
sprot_target db:uniprot_sprot|sp|A8LKN5|ILVD_DINSH 1 577 evalue:7.4e-295 qcov:100.00 identity:86.10;
tigrfam_acc TIGR00110;
tigrfam_desc dihydroxy-acid dehydratase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ilvD;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00110 evalue:1.8e-198 score:659.7 best_domain_score:659.5 name:TIGR00110;
54450 54686 CDS
ID metaerg.pl|04593
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Defluviimonas;s__Defluviimonas denitrificans;
genomedb_acc GCF_002973535.1;
genomedb_target db:genomedb|GCF_002973535.1|WP_105513060.1 5 77 evalue:1.5e-18 qcov:93.60 identity:64.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
tm_num 2;
54450 54686 transmembrane_helix
ID metaerg.pl|04594
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i54486-54554o54597-54650i;
54914 56086 CDS
ID metaerg.pl|04595
allec_ids 2.6.1.11;
allgo_ids GO:0008483; GO:0030170; GO:0005737; GO:0003992; GO:0006526;
allko_ids K00821; K00818; K05830;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05513.1 1 390 evalue:4.7e-177 qcov:100.00 identity:80.80;
kegg_pathway_id 00300; 00220;
kegg_pathway_name Lysine biosynthesis; Urea cycle and metabolism of amino groups;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; GLUTORN-PWY; ARGSYN-PWY; PWY-5154;
metacyc_pathway_name superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis I;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);;
metacyc_pathway_type Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:7.9e-114 score:379.7 best_domain_score:379.3 name:Aminotran_3;
sprot_desc Acetylornithine aminotransferase;
sprot_id sp|P30900|ARGD_RHOCB;
sprot_target db:uniprot_sprot|sp|P30900|ARGD_RHOCB 1 387 evalue:7.6e-150 qcov:99.20 identity:68.80;
tigrfam_acc TIGR00707;
tigrfam_desc transaminase, acetylornithine/succinylornithine family;
tigrfam_name argD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00707 evalue:2.2e-137 score:457.1 best_domain_score:456.9 name:TIGR00707;
56167 57093 CDS
ID metaerg.pl|04596
allec_ids 2.1.3.3;
allgo_ids GO:0006520; GO:0016597; GO:0016743; GO:0005737; GO:0004585; GO:0019547; GO:0019546;
allko_ids K11541; K00610; K01955; K13043; K01954; K00609; K11540; K00611; K01956;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05512.1 1 308 evalue:2.0e-159 qcov:100.00 identity:89.00;
kegg_pathway_id 00240; 00251; 00252; 00220; 00330;
kegg_pathway_name Pyrimidine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Arginine and proline metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id PWY-4984; PWY-5004; PWY-5; ARG+POLYAMINE-SYN; ARGININE-SYN4-PWY; ARGSYNBSUB-PWY; ARGDEGRAD-PWY; ARGORNPROST-PWY; CITRULLINE-DEG-PWY; ARGSYN-PWY; PWY-4981; CITRULBIO-PWY;
metacyc_pathway_name urea cycle;; superpathway of L-citrulline metabolism;; canavanine biosynthesis;; superpathway of arginine and polyamine biosynthesis;; L-ornithine biosynthesis II;; L-arginine biosynthesis II (acetyl cycle);; L-arginine degradation V (arginine deiminase pathway);; L-arginine degradation (Stickland reaction);; L-citrulline degradation;; L-arginine biosynthesis I (via L-ornithine);; L-proline biosynthesis II (from arginine);; L-citrulline biosynthesis;;
metacyc_pathway_type NITROGEN-DEG;; Citrulline-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; Polyamine-Biosynthesis; Super-Pathways;; L-Ornithine-Biosynthesis;; ARGININE-SYN;; ARGININE-DEG; Super-Pathways;; ARGININE-DEG; Super-Pathways;; MISCELLANEOUS-DEG;; ARGININE-SYN; Super-Pathways;; PROLINE-SYN;; Citrulline-Biosynthesis;;
pfam_acc PF00185; PF02729;
pfam_desc Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain;
pfam_id OTCace; OTCace_N;
pfam_target db:Pfam-A.hmm|PF00185.24 evalue:2.6e-52 score:176.3 best_domain_score:175.6 name:OTCace; db:Pfam-A.hmm|PF02729.21 evalue:1.2e-46 score:157.6 best_domain_score:156.9 name:OTCace_N;
sprot_desc Ornithine carbamoyltransferase;
sprot_id sp|B9KMW0|OTC_RHOSK;
sprot_target db:uniprot_sprot|sp|B9KMW0|OTC_RHOSK 1 308 evalue:4.1e-151 qcov:100.00 identity:83.80;
tigrfam_acc TIGR00658;
tigrfam_desc ornithine carbamoyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name orni_carb_tr;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00658 evalue:3.9e-113 score:376.8 best_domain_score:376.6 name:TIGR00658;
57175 59184 CDS
ID metaerg.pl|04597
allec_ids 3.4.15.5;
allgo_ids GO:0004222; GO:0006508; GO:0005737; GO:0005829; GO:0030288; GO:0004180; GO:0046872;
allko_ids K01284;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH29221.1 1 669 evalue:8.9e-311 qcov:100.00 identity:80.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01432;
pfam_desc Peptidase family M3;
pfam_id Peptidase_M3;
pfam_target db:Pfam-A.hmm|PF01432.20 evalue:1.4e-105 score:353.4 best_domain_score:353.1 name:Peptidase_M3;
sprot_desc Dipeptidyl carboxypeptidase;
sprot_id sp|P24171|DCP_ECOLI;
sprot_target db:uniprot_sprot|sp|P24171|DCP_ECOLI 3 666 evalue:1.5e-118 qcov:99.30 identity:36.90;
59604 59260 CDS
ID metaerg.pl|04598
allgo_ids GO:0051920; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246307.1 1 112 evalue:2.8e-45 qcov:98.20 identity:83.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF02627;
pfam_desc Carboxymuconolactone decarboxylase family;
pfam_id CMD;
pfam_target db:Pfam-A.hmm|PF02627.20 evalue:4.8e-17 score:61.0 best_domain_score:60.6 name:CMD;
sprot_desc hypothetical protein;
sprot_id sp|P27749|Y4147_CUPNH;
sprot_target db:uniprot_sprot|sp|P27749|Y4147_CUPNH 13 111 evalue:3.9e-14 qcov:86.80 identity:41.40;
tigrfam_acc TIGR00778;
tigrfam_desc alkylhydroperoxidase AhpD family core domain;
tigrfam_mainrole Unknown function;
tigrfam_name ahpD_dom;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00778 evalue:1e-09 score:36.9 best_domain_score:36.4 name:TIGR00778;
60327 59674 CDS
ID metaerg.pl|04599
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06249.1 1 216 evalue:8.9e-69 qcov:99.50 identity:63.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF06080; PF08241; PF13489; PF13649;
pfam_desc Protein of unknown function (DUF938); Methyltransferase domain; Methyltransferase domain; Methyltransferase domain;
pfam_id DUF938; Methyltransf_11; Methyltransf_23; Methyltransf_25;
pfam_target db:Pfam-A.hmm|PF06080.12 evalue:5.6e-49 score:165.9 best_domain_score:165.7 name:DUF938; db:Pfam-A.hmm|PF08241.12 evalue:9.9e-05 score:22.2 best_domain_score:21.3 name:Methyltransf_11; db:Pfam-A.hmm|PF13489.6 evalue:8.8e-07 score:28.1 best_domain_score:27.7 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:7.1e-09 score:35.5 best_domain_score:34.7 name:Methyltransf_25;
sprot_desc Methyltransferase-like 26;
sprot_id sp|Q96S19|MTL26_HUMAN;
sprot_target db:uniprot_sprot|sp|Q96S19|MTL26_HUMAN 20 210 evalue:1.1e-17 qcov:88.00 identity:35.40;
60518 62296 CDS
ID metaerg.pl|04600
allec_ids 2.3.3.15;
allgo_ids GO:0003824; GO:0030976; GO:0005737; GO:0000287; GO:0050487; GO:0019529;
allko_ids K04103; K01568; K01576; K01637; K03852; K12732; K12253; K01652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795999.1 1 589 evalue:8.6e-308 qcov:99.50 identity:87.80;
kegg_pathway_id 00650; 00660; 00630; 00362; 00430; 00770; 00380; 00010; 00290; 00622;
kegg_pathway_name Butanoate metabolism; C5-Branched dibasic acid metabolism; Glyoxylate and dicarboxylate metabolism; Benzoate degradation via hydroxylation; Taurine and hypotaurine metabolism; Pantothenate and CoA biosynthesis; Tryptophan metabolism; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine biosynthesis; Toluene and xylene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id PWY-1281;
metacyc_pathway_name sulfoacetaldehyde degradation I;;
metacyc_pathway_type Sulfoacetaldehyde-Degradation;;
pfam_acc PF02775; PF00205; PF02776;
pfam_desc Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain;
pfam_id TPP_enzyme_C; TPP_enzyme_M; TPP_enzyme_N;
pfam_target db:Pfam-A.hmm|PF02775.21 evalue:1.4e-27 score:95.6 best_domain_score:95.6 name:TPP_enzyme_C; db:Pfam-A.hmm|PF00205.22 evalue:1.1e-34 score:118.3 best_domain_score:117.5 name:TPP_enzyme_M; db:Pfam-A.hmm|PF02776.18 evalue:3.1e-43 score:146.6 best_domain_score:144.7 name:TPP_enzyme_N;
sprot_desc Sulfoacetaldehyde acetyltransferase;
sprot_id sp|A3SR25|XSC_ROSNI;
sprot_target db:uniprot_sprot|sp|A3SR25|XSC_ROSNI 1 589 evalue:1.3e-289 qcov:99.50 identity:83.20;
tigrfam_acc TIGR03457;
tigrfam_desc sulfoacetaldehyde acetyltransferase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name sulphoacet_xsc;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR03457 evalue:2e-280 score:930.4 best_domain_score:930.2 name:TIGR03457;
62293 63051 CDS
ID metaerg.pl|04601
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07262.1 6 252 evalue:7.7e-72 qcov:98.00 identity:58.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01925;
pfam_desc Sulfite exporter TauE/SafE;
pfam_id TauE;
pfam_target db:Pfam-A.hmm|PF01925.19 evalue:2.1e-20 score:72.6 best_domain_score:72.3 name:TauE;
tm_num 8;
62293 63051 transmembrane_helix
ID metaerg.pl|04602
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology o62335-62388i62407-62475o62533-62601i62620-62679o62707-62775i62812-62880o62893-62952i62989-63045o;
63174 64079 CDS
ID metaerg.pl|04603
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07263.1 13 298 evalue:6.5e-110 qcov:95.00 identity:71.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:4.2e-23 score:81.3 best_domain_score:56.2 name:EamA;
tm_num 8;
63174 64079 transmembrane_helix
ID metaerg.pl|04604
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology o63237-63305i63342-63401o63498-63566i63591-63650o63660-63716i63750-63818o63846-63914i63972-64040o;
64238 65332 CDS
ID metaerg.pl|04605
allgo_ids GO:0055085; GO:0042597; GO:0031317; GO:0046872; GO:0043177; GO:0042803; GO:0015849; GO:0071702;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092886599.1 1 363 evalue:2.2e-152 qcov:99.70 identity:70.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:7.6e-41 score:139.5 best_domain_score:139.2 name:DctP;
sp YES;
sprot_desc Alpha-keto acid-binding periplasmic protein TakP;
sprot_id sp|Q3J1R2|TAKP_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J1R2|TAKP_RHOS4 1 353 evalue:7.3e-62 qcov:97.00 identity:37.20;
tigrfam_acc TIGR01409;
tigrfam_desc Tat (twin-arginine translocation) pathway signal sequence;
tigrfam_mainrole Protein fate;
tigrfam_name TAT_signal_seq;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01409 evalue:0.00029 score:20.2 best_domain_score:20.2 name:TIGR01409;
64238 64321 signal_peptide
ID metaerg.pl|04606
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
65444 66439 CDS
ID metaerg.pl|04607
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092886597.1 4 315 evalue:1.6e-98 qcov:94.30 identity:60.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:8.7e-13 score:47.6 best_domain_score:47.6 name:DctQ;
tm_num 8;
65444 66439 transmembrane_helix
ID metaerg.pl|04608
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i65480-65548o65606-65662i65720-65788o65861-65914i65927-65995o66023-66082i66143-66211o66287-66355i;
66446 69106 CDS
ID metaerg.pl|04609
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092886595.1 1 886 evalue:0.0e+00 qcov:100.00 identity:71.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:1.5e-74 score:250.5 best_domain_score:131.9 name:DctM;
sp YES;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:7e-81 score:271.2 best_domain_score:173.2 name:TIGR00786;
tm_num 15;
66446 66523 signal_peptide
ID metaerg.pl|04610
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
66446 69106 transmembrane_helix
ID metaerg.pl|04611
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i66458-66526o66536-66604i66683-66736o66794-66895i66932-67000o67130-67198i67259-67327o67337-67396i67415-67471o67514-67582i67640-67708o67751-67807i67811-67864o67892-67960i68015-68083o;
69206 70327 CDS
ID metaerg.pl|04612
allec_ids 1.13.11.4;
allgo_ids GO:0006355; GO:0047922; GO:0019439;
allko_ids K00971; K01485; K00450;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudooceanicola_B;s__Pseudooceanicola_B sp002210165;
genomedb_acc GCF_002210165.1;
genomedb_target db:genomedb|GCF_002210165.1|WP_088634453.1 1 371 evalue:1.2e-201 qcov:99.50 identity:86.30;
kegg_pathway_id 00051; 00240; 00350;
kegg_pathway_name Fructose and mannose metabolism; Pyrimidine metabolism; Tyrosine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id PWY-6223;
metacyc_pathway_name gentisate degradation I;;
metacyc_pathway_type Gentisate-Degradation;;
pfam_acc PF02311; PF02041; PF07883;
pfam_desc AraC-like ligand binding domain; Auxin binding protein; Cupin domain;
pfam_id AraC_binding; Auxin_BP; Cupin_2;
pfam_target db:Pfam-A.hmm|PF02311.19 evalue:4.1e-09 score:35.7 best_domain_score:20.0 name:AraC_binding; db:Pfam-A.hmm|PF02041.16 evalue:5e-08 score:32.0 best_domain_score:15.9 name:Auxin_BP; db:Pfam-A.hmm|PF07883.11 evalue:5.7e-34 score:114.9 best_domain_score:63.8 name:Cupin_2;
sprot_desc Gentisate 1,2-dioxygenase;
sprot_id sp|Q7X284|SDGD_STRSQ;
sprot_target db:uniprot_sprot|sp|Q7X284|SDGD_STRSQ 28 359 evalue:2.2e-53 qcov:89.00 identity:38.10;
70363 71304 CDS
ID metaerg.pl|04613
allgo_ids GO:0003824; GO:0018773; GO:0016787; GO:0046872;
allko_ids K01555;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter_A;s__Gemmobacter_A nectariphilus;
genomedb_acc GCF_000429765.1;
genomedb_target db:genomedb|GCF_000429765.1|WP_028031801.1 1 306 evalue:1.8e-142 qcov:97.80 identity:81.70;
kegg_pathway_id 00350; 00643;
kegg_pathway_name Tyrosine metabolism; Styrene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01557;
pfam_desc Fumarylacetoacetate (FAA) hydrolase family;
pfam_id FAA_hydrolase;
pfam_target db:Pfam-A.hmm|PF01557.18 evalue:1.1e-67 score:227.2 best_domain_score:226.9 name:FAA_hydrolase;
sprot_desc hypothetical protein;
sprot_id sp|O06724|YISK_BACSU;
sprot_target db:uniprot_sprot|sp|O06724|YISK_BACSU 74 300 evalue:7.4e-47 qcov:72.50 identity:42.10;
71473 72111 CDS
ID metaerg.pl|04614
allgo_ids GO:0010181;
allko_ids K00492;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter;s__Sulfitobacter sp001886735;
genomedb_acc GCF_001886735.1;
genomedb_target db:genomedb|GCF_001886735.1|WP_071974042.1 1 211 evalue:1.6e-83 qcov:99.50 identity:70.60;
kegg_pathway_id 00903; 00680; 00350; 00360; 00340; 00624; 00622; 00626; 00361; 00120; 00150;
kegg_pathway_name Limonene and pinene degradation; Methane metabolism; Tyrosine metabolism; Phenylalanine metabolism; Histidine metabolism; 1- and 2-Methylnaphthalene degradation; Toluene and xylene degradation; Naphthalene and anthracene degradation; gamma-Hexachlorocyclohexane degradation; Bile acid biosynthesis; Androgen and estrogen metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01613;
pfam_desc Flavin reductase like domain;
pfam_id Flavin_Reduct;
pfam_target db:Pfam-A.hmm|PF01613.18 evalue:9e-21 score:73.8 best_domain_score:73.4 name:Flavin_Reduct;
sprot_desc hypothetical protein;
sprot_id sp|Q9KAK9|Y2278_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KAK9|Y2278_BACHD 1 205 evalue:4.0e-28 qcov:96.70 identity:37.10;
72239 72559 CDS
ID metaerg.pl|04615
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005623; GO:0015035; GO:0045454; GO:0006662;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28368.1 1 106 evalue:7.2e-48 qcov:100.00 identity:87.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00578; PF08534; PF00085; PF13098; PF13905;
pfam_desc AhpC/TSA family; Redoxin; Thioredoxin; Thioredoxin-like domain; Thioredoxin-like;
pfam_id AhpC-TSA; Redoxin; Thioredoxin; Thioredoxin_2; Thioredoxin_8;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:2.9e-06 score:26.5 best_domain_score:25.4 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:8.2e-08 score:31.3 best_domain_score:30.8 name:Redoxin; db:Pfam-A.hmm|PF00085.20 evalue:1.1e-33 score:114.5 best_domain_score:114.4 name:Thioredoxin; db:Pfam-A.hmm|PF13098.6 evalue:9.7e-08 score:31.7 best_domain_score:30.4 name:Thioredoxin_2; db:Pfam-A.hmm|PF13905.6 evalue:1.2e-07 score:31.2 best_domain_score:27.9 name:Thioredoxin_8;
sprot_desc Thioredoxin;
sprot_id sp|P08058|THIO_RHOSH;
sprot_target db:uniprot_sprot|sp|P08058|THIO_RHOSH 1 106 evalue:8.9e-45 qcov:100.00 identity:79.20;
tigrfam_acc TIGR01068;
tigrfam_desc thioredoxin;
tigrfam_mainrole Energy metabolism;
tigrfam_name thioredoxin;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01068 evalue:1.1e-35 score:120.9 best_domain_score:120.8 name:TIGR01068;
75122 73080 CDS
ID metaerg.pl|04616
allko_ids K07654; K03407; K07641; K07646; K07708; K08282; K07642; K04486; K07636; K07653; K04757; K01769; K06379;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06928.1 1 522 evalue:6.9e-152 qcov:76.80 identity:55.80;
kegg_pathway_id 02020; 00340; 00230;
kegg_pathway_name Two-component system - General; Histidine metabolism; Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF08448; PF12860; PF13188;
pfam_desc PAS fold; PAS fold; PAS domain;
pfam_id PAS_4; PAS_7; PAS_8;
pfam_target db:Pfam-A.hmm|PF08448.10 evalue:2.2e-07 score:30.4 best_domain_score:14.7 name:PAS_4; db:Pfam-A.hmm|PF12860.7 evalue:1.4e-13 score:50.2 best_domain_score:35.7 name:PAS_7; db:Pfam-A.hmm|PF13188.7 evalue:1.2e-08 score:34.0 best_domain_score:10.8 name:PAS_8;
76613 75219 CDS
ID metaerg.pl|04617
allec_ids 2.7.13.3;
allgo_ids GO:0016021; GO:0005886; GO:0005524; GO:0000155;
allko_ids K07709; K07644; K06379; K07676; K10681; K07650; K13040; K10942; K07647; K07675; K07769; K11383; K02486; K10125; K11629; K11357; K04757; K07716; K07656; K01768; K07710; K07640; K03388; K02668; K08479; K02030; K11527; K07678; K02480; K08801; K02482; K07636; K07638; K07653; K02484; K11640; K11711; K07642; K07643; K07645; K07708; K07677; K08282; K07704; K08475; K07639; K07673; K07641; K07646; K07652; K00936; K07649; K07682; K07654; K07637; K03407; K07648; K07651; K07768; K11633; K07778; K07711;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06929.1 16 450 evalue:9.6e-137 qcov:93.80 identity:62.30;
kegg_pathway_id 00230; 05111; 00790; 03090; 02020;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Folate biosynthesis; Type II secretion system; Two-component system - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF02518;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;
pfam_id HATPase_c;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:2.9e-14 score:52.8 best_domain_score:52.0 name:HATPase_c;
sprot_desc Sensor histidine kinase RegB;
sprot_id sp|P0C0Z0|REGB_RHOSH;
sprot_target db:uniprot_sprot|sp|P0C0Z0|REGB_RHOSH 16 449 evalue:3.8e-116 qcov:93.50 identity:53.00;
tm_num 4;
76613 75219 transmembrane_helix
ID metaerg.pl|04618
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i75363-75431o75489-75557i75594-75662o75690-75758i;
76700 77344 CDS
ID metaerg.pl|04619
allgo_ids GO:0005623; GO:0046872; GO:0045454; GO:0015979;
allko_ids K07152;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06930.1 9 214 evalue:8.5e-80 qcov:96.30 identity:71.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF02630;
pfam_desc SCO1/SenC;
pfam_id SCO1-SenC;
pfam_target db:Pfam-A.hmm|PF02630.14 evalue:1.2e-42 score:144.3 best_domain_score:144.0 name:SCO1-SenC;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|Q52720|SENC_RHOCB;
sprot_target db:uniprot_sprot|sp|Q52720|SENC_RHOCB 39 214 evalue:6.6e-47 qcov:82.20 identity:50.00;
tm_num 1;
76700 76792 signal_peptide
ID metaerg.pl|04620
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
76700 77344 transmembrane_helix
ID metaerg.pl|04621
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i76733-76801o;
77432 77992 CDS
ID metaerg.pl|04622
allgo_ids GO:0043565; GO:0000160;
allko_ids K07675; K07647; K10125; K11357; K04757; K12767; K13761; K02486; K07644; K07709; K06379; K10681; K07676; K10715; K07678; K11527; K07636; K07653; K02480; K02482; K01768; K07710; K07716; K08479; K03388; K02668; K02491; K01937; K08282; K07677; K07708; K11640; K11356; K00760; K02484; K07642; K11711; K07718; K07651; K07648; K07768; K07778; K11354; K07652; K08475; K07639; K07673; K01120; K07641; K07646; K03407; K07682; K07654;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068298882.1 2 186 evalue:4.9e-76 qcov:99.50 identity:82.20;
kegg_pathway_id 00240; 00230; 00790; 00983; 03090; 02020;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Folate biosynthesis; Drug metabolism - other enzymes; Type II secretion system; Two-component system - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF02954; PF00072;
pfam_desc Bacterial regulatory protein, Fis family; Response regulator receiver domain;
pfam_id HTH_8; Response_reg;
pfam_target db:Pfam-A.hmm|PF02954.19 evalue:0.00011 score:21.1 best_domain_score:20.5 name:HTH_8; db:Pfam-A.hmm|PF00072.24 evalue:4.1e-20 score:71.2 best_domain_score:70.8 name:Response_reg;
sprot_desc Photosynthetic apparatus regulatory protein RegA;
sprot_id sp|O82868|REGA_RHOSU;
sprot_target db:uniprot_sprot|sp|O82868|REGA_RHOSU 2 186 evalue:1.6e-73 qcov:99.50 identity:79.50;
78639 78043 CDS
ID metaerg.pl|04623
allko_ids K06952;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06921.1 1 187 evalue:2.1e-77 qcov:94.40 identity:78.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01966; PF12917; PF13023;
pfam_desc HD domain; HD containing hydrolase-like enzyme ; HD domain;
pfam_id HD; HD_2; HD_3;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:8.6e-07 score:28.4 best_domain_score:26.8 name:HD; db:Pfam-A.hmm|PF12917.7 evalue:2.4e-10 score:39.7 best_domain_score:31.4 name:HD_2; db:Pfam-A.hmm|PF13023.6 evalue:5.4e-06 score:25.7 best_domain_score:25.3 name:HD_3;
sprot_desc hypothetical protein;
sprot_id sp|P42506|Y048_RHOCB;
sprot_target db:uniprot_sprot|sp|P42506|Y048_RHOCB 1 183 evalue:1.8e-70 qcov:92.40 identity:73.20;
80046 79168 CDS
ID metaerg.pl|04624
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28396.1 46 251 evalue:5.9e-07 qcov:70.50 identity:33.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
tm_num 1;
80046 79168 transmembrane_helix
ID metaerg.pl|04625
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i79963-80031o;
80708 80175 CDS
ID metaerg.pl|04626
allgo_ids GO:0015031; GO:0051082; GO:0051262; GO:0005737; GO:0006457;
allko_ids K03071;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06919.1 1 174 evalue:2.6e-66 qcov:98.30 identity:72.40;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF02556;
pfam_desc Preprotein translocase subunit SecB;
pfam_id SecB;
pfam_target db:Pfam-A.hmm|PF02556.14 evalue:2e-50 score:169.6 best_domain_score:169.3 name:SecB;
sprot_desc Protein-export protein SecB;
sprot_id sp|A3PNT4|SECB_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PNT4|SECB_RHOS1 16 175 evalue:7.6e-57 qcov:90.40 identity:67.90;
tigrfam_acc TIGR00809;
tigrfam_desc protein-export chaperone SecB;
tigrfam_mainrole Protein fate;
tigrfam_name secB;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00809 evalue:8.7e-33 score:112.4 best_domain_score:112.2 name:TIGR00809;
81276 80776 CDS
ID metaerg.pl|04627
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06918.1 1 149 evalue:6.9e-29 qcov:89.80 identity:54.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF04186;
pfam_desc FxsA cytoplasmic membrane protein;
pfam_id FxsA;
pfam_target db:Pfam-A.hmm|PF04186.13 evalue:8.6e-23 score:79.8 best_domain_score:79.5 name:FxsA;
tm_num 3;
81276 80776 transmembrane_helix
ID metaerg.pl|04628
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i80779-80838o80851-80910i80971-81039o;
81392 82057 CDS
ID metaerg.pl|04629
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06917.1 1 220 evalue:3.0e-88 qcov:99.50 identity:75.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF04280;
pfam_desc Tim44-like domain;
pfam_id Tim44;
pfam_target db:Pfam-A.hmm|PF04280.15 evalue:5e-43 score:146.0 best_domain_score:145.6 name:Tim44;
tm_num 1;
81392 82057 transmembrane_helix
ID metaerg.pl|04630
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology o81404-81457i;
82131 82790 CDS
ID metaerg.pl|04631
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus aminophilus;
genomedb_acc GCF_000444995.1;
genomedb_target db:genomedb|GCF_000444995.1|WP_020952102.1 1 217 evalue:5.5e-42 qcov:99.10 identity:50.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01713;
pfam_desc Smr domain;
pfam_id Smr;
pfam_target db:Pfam-A.hmm|PF01713.21 evalue:1.8e-21 score:75.5 best_domain_score:74.5 name:Smr;
82884 84128 CDS
ID metaerg.pl|04632
allec_ids 4.3.1.19;
allgo_ids GO:0004794; GO:0030170; GO:0009097; GO:0006567; GO:0006566;
allko_ids K01754; K01733;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06913.1 1 414 evalue:9.0e-179 qcov:100.00 identity:75.60;
kegg_pathway_id 00260; 00290; 00750;
kegg_pathway_name Glycine, serine and threonine metabolism; Valine, leucine and isoleucine biosynthesis; Vitamin B6 metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id THREOCAT-PWY; PWY-5826; PWY-5437; PWY-3001; ILEUSYN-PWY; BRANCHED-CHAIN-AA-SYN-PWY;
metacyc_pathway_name superpathway of L-threonine metabolism;; hypoglycin biosynthesis;; L-threonine degradation I;; superpathway of L-isoleucine biosynthesis I;; L-isoleucine biosynthesis I (from threonine);; superpathway of branched chain amino acid biosynthesis;;
metacyc_pathway_type Super-Pathways; THREONINE-DEG;; SECONDARY-METABOLITE-BIOSYNTHESIS;; THREONINE-DEG;; ISOLEUCINE-SYN; Super-Pathways;; ISOLEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00291; PF00585;
pfam_desc Pyridoxal-phosphate dependent enzyme; C-terminal regulatory domain of Threonine dehydratase;
pfam_id PALP; Thr_dehydrat_C;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:6.2e-69 score:231.9 best_domain_score:231.5 name:PALP; db:Pfam-A.hmm|PF00585.18 evalue:7.7e-18 score:63.3 best_domain_score:62.6 name:Thr_dehydrat_C;
sprot_desc L-threonine dehydratase biosynthetic IlvA;
sprot_id sp|P37946|ILVA_BACSU;
sprot_target db:uniprot_sprot|sp|P37946|ILVA_BACSU 15 414 evalue:4.6e-97 qcov:96.60 identity:47.00;
tigrfam_acc TIGR02079;
tigrfam_desc threonine dehydratase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name THD1;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR02079 evalue:3.2e-160 score:532.6 best_domain_score:532.3 name:TIGR02079;
84601 84260 CDS
ID metaerg.pl|04633
allgo_ids GO:0000160;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06912.1 1 113 evalue:1.5e-19 qcov:100.00 identity:49.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01627;
pfam_desc Hpt domain;
pfam_id Hpt;
pfam_target db:Pfam-A.hmm|PF01627.23 evalue:4e-10 score:39.0 best_domain_score:38.4 name:Hpt;
84827 86023 CDS
ID metaerg.pl|04634
allgo_ids GO:0000160;
allko_ids K07645; K07708; K07677; K08282; K01937; K07704; K11231; K11711; K07642; K02484; K11640; K11356; K07768; K11354; K07778; K07711; K07648; K02478; K07679; K07651; K07682; K07654; K07637; K03407; K07673; K01120; K08475; K07639; K07646; K07641; K07652; K13761; K02486; K11383; K12767; K11357; K10125; K04757; K07647; K07717; K07675; K10681; K07676; K06379; K07650; K07644; K02480; K02482; K07636; K07653; K11527; K07678; K10715; K03388; K02668; K10916; K08479; K07716; K02489; K01768; K07710;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06911.1 1 398 evalue:6.5e-150 qcov:100.00 identity:66.10;
kegg_pathway_id 03090; 02020; 04011; 00240; 00230; 05111; 00790;
kegg_pathway_name Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00072; PF07228;
pfam_desc Response regulator receiver domain; Stage II sporulation protein E (SpoIIE);
pfam_id Response_reg; SpoIIE;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:4.5e-25 score:87.2 best_domain_score:86.4 name:Response_reg; db:Pfam-A.hmm|PF07228.12 evalue:6.1e-39 score:133.2 best_domain_score:133.1 name:SpoIIE;
86491 88995 CDS
ID metaerg.pl|04635
allec_ids 1.5.8.4;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0005759; GO:0005739; GO:0047865; GO:0050660; GO:0005542; GO:0006579; GO:0042426; GO:0035999;
allko_ids K00605; K00302; K00314; K00315;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07899.1 1 834 evalue:0.0e+00 qcov:100.00 identity:84.90;
kegg_pathway_id 00910; 00260; 00670;
kegg_pathway_name Nitrogen metabolism; Glycine, serine and threonine metabolism; One carbon pool by folate;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01266; PF01494; PF16350; PF01571; PF08669;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; FAD dependent oxidoreductase central domain; Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain;
pfam_id DAO; FAD_binding_3; FAO_M; GCV_T; GCV_T_C;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:5.4e-54 score:183.3 best_domain_score:182.6 name:DAO; db:Pfam-A.hmm|PF01494.19 evalue:2.8e-05 score:22.8 best_domain_score:14.5 name:FAD_binding_3; db:Pfam-A.hmm|PF16350.5 evalue:2.1e-16 score:59.2 best_domain_score:57.1 name:FAO_M; db:Pfam-A.hmm|PF01571.21 evalue:9.7e-67 score:224.3 best_domain_score:223.4 name:GCV_T; db:Pfam-A.hmm|PF08669.11 evalue:1.6e-18 score:65.6 best_domain_score:64.2 name:GCV_T_C;
sprot_desc Dimethylglycine dehydrogenase, mitochondrial;
sprot_id sp|Q9DBT9|M2GD_MOUSE;
sprot_target db:uniprot_sprot|sp|Q9DBT9|M2GD_MOUSE 2 834 evalue:3.9e-143 qcov:99.90 identity:34.60;
tm_num 1;
86491 88995 transmembrane_helix
ID metaerg.pl|04636
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i86509-86562o;
91031 89064 CDS
ID metaerg.pl|04637
allec_ids 3.1.3.6;
allgo_ids GO:0009166; GO:0016787; GO:0042597; GO:0008663; GO:0008254; GO:0046872; GO:0000166;
allko_ids K01119; K08077; K08693; K01081;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE46080.1 1 651 evalue:1.9e-231 qcov:99.40 identity:61.90;
kegg_pathway_id 00760; 00240; 00230;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Pyrimidine metabolism; Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF02872; PF00149;
pfam_desc 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase;
pfam_id 5_nucleotid_C; Metallophos;
pfam_target db:Pfam-A.hmm|PF02872.18 evalue:2.8e-22 score:78.8 best_domain_score:78.1 name:5_nucleotid_C; db:Pfam-A.hmm|PF00149.28 evalue:1.7e-09 score:37.7 best_domain_score:36.9 name:Metallophos;
sprot_desc 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
sprot_id sp|P53052|CPDB_YEREN;
sprot_target db:uniprot_sprot|sp|P53052|CPDB_YEREN 6 651 evalue:1.6e-120 qcov:98.60 identity:37.40;
91254 92231 CDS
ID metaerg.pl|04638
allgo_ids GO:0016787;
allko_ids K01515; K08310; K03574; K01529;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07903.1 14 324 evalue:4.0e-121 qcov:95.70 identity:67.80;
kegg_pathway_id 00230; 00790;
kegg_pathway_name Purine metabolism; Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00293; PF09296; PF09297;
pfam_desc NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain; NADH pyrophosphatase zinc ribbon domain;
pfam_id NUDIX; NUDIX-like; zf-NADH-PPase;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:2.6e-17 score:62.3 best_domain_score:61.3 name:NUDIX; db:Pfam-A.hmm|PF09296.11 evalue:8.9e-17 score:60.9 best_domain_score:59.6 name:NUDIX-like; db:Pfam-A.hmm|PF09297.11 evalue:6.5e-13 score:47.3 best_domain_score:46.2 name:zf-NADH-PPase;
93072 92239 CDS
ID metaerg.pl|04639
allec_ids 4.2.1.51;
allgo_ids GO:0004664; GO:0009094; GO:0009507; GO:0009570; GO:0047769;
allko_ids K01713; K01850; K04516; K04518; K14187; K14170; K04093; K03856; K13853; K05359;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter sp000526275;
genomedb_acc GCF_000526275.1;
genomedb_target db:genomedb|GCF_000526275.1|WP_024810301.1 2 276 evalue:1.3e-120 qcov:99.30 identity:79.60;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; PHESYN;
metacyc_pathway_name superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; L-phenylalanine biosynthesis I;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; PHENYLALANINE-SYN;;
pfam_acc PF00800;
pfam_desc Prephenate dehydratase;
pfam_id PDT;
pfam_target db:Pfam-A.hmm|PF00800.18 evalue:6e-53 score:178.6 best_domain_score:178.3 name:PDT;
sprot_desc Arogenate dehydratase/prephenate dehydratase 2, chloroplastic;
sprot_id sp|Q9SSE7|AROD2_ARATH;
sprot_target db:uniprot_sprot|sp|Q9SSE7|AROD2_ARATH 5 273 evalue:1.2e-40 qcov:97.10 identity:36.30;
93210 93725 CDS
ID metaerg.pl|04640
allgo_ids GO:0009055; GO:0020037; GO:0016021; GO:0005886; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07900.1 1 167 evalue:3.6e-57 qcov:97.70 identity:65.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00034;
pfam_desc Cytochrome c;
pfam_id Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF00034.21 evalue:7.6e-05 score:23.0 best_domain_score:21.9 name:Cytochrom_C;
sprot_desc Cytochrome c-552;
sprot_id sp|P54820|CY552_PARDE;
sprot_target db:uniprot_sprot|sp|P54820|CY552_PARDE 1 169 evalue:2.0e-25 qcov:98.80 identity:37.90;
tm_num 1;
93210 93725 transmembrane_helix
ID metaerg.pl|04641
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i93222-93290o;
93892 95871 CDS
ID metaerg.pl|04642
allgo_ids GO:0043190; GO:0030288; GO:0042884; GO:0006857; GO:0055085;
allko_ids K02035; K13893;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07905.1 34 659 evalue:1.4e-287 qcov:95.00 identity:75.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:3.3e-59 score:200.0 best_domain_score:199.5 name:SBP_bac_5;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P33913|YEJA_ECOLI;
sprot_target db:uniprot_sprot|sp|P33913|YEJA_ECOLI 59 655 evalue:5.8e-94 qcov:90.60 identity:33.40;
93892 94032 signal_peptide
ID metaerg.pl|04643
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
95881 96972 CDS
ID metaerg.pl|04644
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K13894; K02033;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07906.1 1 363 evalue:1.5e-177 qcov:100.00 identity:88.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.2e-36 score:125.4 best_domain_score:125.4 name:BPD_transp_1;
sp YES;
sprot_desc Inner membrane ABC transporter permease protein YejB;
sprot_id sp|P0AFU1|YEJB_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFU1|YEJB_ECO57 1 361 evalue:2.5e-115 qcov:99.40 identity:59.60;
tm_num 6;
95881 96000 signal_peptide
ID metaerg.pl|04645
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
95881 96972 transmembrane_helix
ID metaerg.pl|04646
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i95905-95973o96265-96333i96370-96438o96544-96612i96721-96789o96847-96915i;
96977 98185 CDS
ID metaerg.pl|04647
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0042884; GO:0035672;
allko_ids K02034; K13895;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07908.1 36 402 evalue:2.3e-163 qcov:91.30 identity:79.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00528; PF12911;
pfam_desc Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C;
pfam_id BPD_transp_1; OppC_N;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.9e-28 score:98.7 best_domain_score:97.7 name:BPD_transp_1; db:Pfam-A.hmm|PF12911.7 evalue:2.3e-09 score:36.3 best_domain_score:36.3 name:OppC_N;
sprot_desc Inner membrane ABC transporter permease protein YejE;
sprot_id sp|P33915|YEJE_ECOLI;
sprot_target db:uniprot_sprot|sp|P33915|YEJE_ECOLI 36 399 evalue:2.4e-82 qcov:90.50 identity:46.60;
tm_num 6;
96977 98185 transmembrane_helix
ID metaerg.pl|04648
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
topology i97133-97201o97589-97657i97691-97759o97769-97837i97925-97993o98072-98140i;
98182 99798 CDS
ID metaerg.pl|04649
allec_ids 3.6.3.24;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0042626; GO:0042884; GO:0035672;
allko_ids K02000; K11962; K02029; K10000; K02041; K02018; K10025; K12372; K02023; K10021; K09812; K01990; K10243; K11076; K02013; K09687; K05816; K06857; K10235; K01998; K10112; K10111; K02031; K02049; K01995; K02065; K02028; K02068; K11072; K02045; K10821; K02062; K10441; K01996; K06861; K02071; K02017; K10017; K02034; K02032; K02074; K11084; K13896; K02004; K02006; K02052; K12371; K05847; K09817; K02056; K02010; K02003; K01997; K13892;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07909.1 1 536 evalue:9.4e-237 qcov:99.60 identity:78.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF13304; PF13555; PF00005; PF08352; PF02463;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; P-loop containing region of AAA domain; ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; RecF/RecN/SMC N terminal domain;
pfam_id AAA_21; AAA_29; ABC_tran; oligo_HPY; SMC_N;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1e-11 score:44.5 best_domain_score:19.8 name:AAA_21; db:Pfam-A.hmm|PF13555.6 evalue:4.9e-07 score:28.6 best_domain_score:13.6 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:2.8e-58 score:195.6 best_domain_score:97.0 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:9.7e-13 score:47.7 best_domain_score:26.4 name:oligo_HPY; db:Pfam-A.hmm|PF02463.19 evalue:1.7e-11 score:43.2 best_domain_score:19.4 name:SMC_N;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YejF;
sprot_id sp|P33916|YEJF_ECOLI;
sprot_target db:uniprot_sprot|sp|P33916|YEJF_ECOLI 2 522 evalue:5.5e-159 qcov:96.80 identity:55.70;
tigrfam_acc TIGR01727; TIGR02769; TIGR02770;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; nickel import ATP-binding protein NikE; nickel import ATP-binding protein NikD;
tigrfam_mainrole Transport and binding proteins; Transport and binding proteins; Transport and binding proteins;
tigrfam_name oligo_HPY; nickel_nikE; nickel_nikD;
tigrfam_sub1role Amino acids, peptides and amines; Cations and iron carrying compounds; Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:3.6e-12 score:45.4 best_domain_score:29.3 name:TIGR01727; db:TIGRFAMs.hmm|TIGR02769 evalue:3.2e-122 score:406.2 best_domain_score:216.4 name:TIGR02769; db:TIGRFAMs.hmm|TIGR02770 evalue:1.5e-137 score:455.6 best_domain_score:260.9 name:TIGR02770;
99804 101024 CDS
ID metaerg.pl|04650
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE47963.1 1 404 evalue:2.0e-178 qcov:99.50 identity:75.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00534; PF13439; PF13692; PF12000;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1; Glycosyl transferase family 4 group;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_4; Glyco_trans_4_3;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:2.3e-13 score:49.3 best_domain_score:48.6 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:1.1e-08 score:34.5 best_domain_score:32.7 name:Glyco_transf_4; db:Pfam-A.hmm|PF13692.6 evalue:1e-12 score:47.9 best_domain_score:47.0 name:Glyco_trans_1_4; db:Pfam-A.hmm|PF12000.8 evalue:5e-51 score:172.0 best_domain_score:171.5 name:Glyco_trans_4_3;
101202 102362 CDS
ID metaerg.pl|04651
allec_ids 1.14.13.107;
allgo_ids GO:0016705; GO:0055114; GO:0018635; GO:0052601;
allko_ids K00517; K14733;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Marivita;s__Marivita cryptomonadis;
genomedb_acc GCF_002115725.1;
genomedb_target db:genomedb|GCF_002115725.1|WP_085633811.1 2 386 evalue:3.6e-206 qcov:99.70 identity:89.40;
kegg_pathway_id 00940; 00361; 00903; 00626;
kegg_pathway_name Phenylpropanoid biosynthesis; gamma-Hexachlorocyclohexane degradation; Limonene and pinene degradation; Naphthalene and anthracene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id PWY-5923;
metacyc_pathway_name limonene degradation I (D-limonene);;
metacyc_pathway_type Limonene-Degradation;;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:4.3e-46 score:157.0 best_domain_score:157.0 name:Bac_luciferase;
sprot_desc Limonene 1,2-monooxygenase;
sprot_id sp|Q9EUT9|LIMB_RHOER;
sprot_target db:uniprot_sprot|sp|Q9EUT9|LIMB_RHOER 3 386 evalue:6.7e-90 qcov:99.50 identity:45.80;
103840 102485 CDS
ID metaerg.pl|04652
allec_ids 1.3.98.3; 1.3.99.22;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0051989; GO:0004109; GO:0046872; GO:0006779; GO:0006782;
allko_ids K02495;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109534583.1 1 451 evalue:1.5e-203 qcov:100.00 identity:78.00;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
metacyc_pathway_id HEMESYN2-PWY; PWY0-1415;
metacyc_pathway_name heme b biosynthesis II (anaerobic);; superpathway of heme b biosynthesis from uroporphyrinogen-III;;
metacyc_pathway_type Heme-b-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF06969; PF04055;
pfam_desc HemN C-terminal domain; Radical SAM superfamily;
pfam_id HemN_C; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF06969.16 evalue:1.9e-07 score:30.3 best_domain_score:29.2 name:HemN_C; db:Pfam-A.hmm|PF04055.21 evalue:3e-19 score:69.3 best_domain_score:68.2 name:Radical_SAM;
sprot_desc Oxygen-independent coproporphyrinogen III oxidase;
sprot_id sp|Q51676|HEMN_PARDP;
sprot_target db:uniprot_sprot|sp|Q51676|HEMN_PARDP 1 451 evalue:1.5e-170 qcov:100.00 identity:65.60;
tigrfam_acc TIGR00538;
tigrfam_desc oxygen-independent coproporphyrinogen III oxidase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemN;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00538 evalue:1.9e-117 score:392.0 best_domain_score:391.7 name:TIGR00538;
104001 104648 CDS
ID metaerg.pl|04653
allgo_ids GO:0003677; GO:0006355; GO:0003700;
allko_ids K01420;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068301623.1 2 214 evalue:4.3e-100 qcov:99.10 identity:84.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00027; PF00325; PF13545;
pfam_desc Cyclic nucleotide-binding domain; Bacterial regulatory proteins, crp family; Crp-like helix-turn-helix domain;
pfam_id cNMP_binding; Crp; HTH_Crp_2;
pfam_target db:Pfam-A.hmm|PF00027.29 evalue:5.5e-14 score:51.2 best_domain_score:50.6 name:cNMP_binding; db:Pfam-A.hmm|PF00325.20 evalue:1.5e-12 score:46.2 best_domain_score:45.2 name:Crp; db:Pfam-A.hmm|PF13545.6 evalue:6e-18 score:63.8 best_domain_score:63.1 name:HTH_Crp_2;
sprot_desc Transcriptional activator protein FnrL;
sprot_id sp|P51007|FNRL_RHOS4;
sprot_target db:uniprot_sprot|sp|P51007|FNRL_RHOS4 2 212 evalue:9.1e-97 qcov:98.10 identity:81.00;
105166 104693 CDS
ID metaerg.pl|04654
allgo_ids GO:0003723; GO:0005737; GO:0070929;
allko_ids K03664;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06284.1 1 157 evalue:7.4e-73 qcov:100.00 identity:87.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF01668;
pfam_desc SmpB protein;
pfam_id SmpB;
pfam_target db:Pfam-A.hmm|PF01668.18 evalue:5e-56 score:187.8 best_domain_score:187.6 name:SmpB;
sprot_desc SsrA-binding protein;
sprot_id sp|A1AZQ0|SSRP_PARDP;
sprot_target db:uniprot_sprot|sp|A1AZQ0|SSRP_PARDP 1 155 evalue:3.6e-66 qcov:98.70 identity:81.90;
tigrfam_acc TIGR00086;
tigrfam_desc SsrA-binding protein;
tigrfam_mainrole Protein synthesis;
tigrfam_name smpB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00086 evalue:1.8e-52 score:176.4 best_domain_score:176.2 name:TIGR00086;
105457 105798 CDS
ID metaerg.pl|04655
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109531456.1 1 113 evalue:2.9e-39 qcov:100.00 identity:74.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF10984;
pfam_desc Protein of unknown function (DUF2794);
pfam_id DUF2794;
pfam_target db:Pfam-A.hmm|PF10984.8 evalue:1.1e-36 score:124.0 best_domain_score:123.8 name:DUF2794;
105826 106476 CDS
ID metaerg.pl|04656
allec_ids 5.4.99.28;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0120159; GO:0106029; GO:0000455; GO:0006364; GO:0031118; GO:0008033; GO:0031119;
allko_ids K06177;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06281.1 1 216 evalue:2.4e-90 qcov:100.00 identity:72.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00849;
pfam_desc RNA pseudouridylate synthase;
pfam_id PseudoU_synth_2;
pfam_target db:Pfam-A.hmm|PF00849.22 evalue:3.6e-30 score:104.4 best_domain_score:104.0 name:PseudoU_synth_2;
sprot_desc Ribosomal large subunit pseudouridine synthase A;
sprot_id sp|P0AA37|RLUA_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AA37|RLUA_ECOLI 6 216 evalue:4.8e-61 qcov:97.70 identity:55.10;
106902 106522 CDS
ID metaerg.pl|04657
allgo_ids GO:0003824;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Thioclava;s__Thioclava dalianensis;
genomedb_acc GCF_000715505.1;
genomedb_target db:genomedb|GCF_000715505.1|WP_038067517.1 1 126 evalue:2.1e-46 qcov:100.00 identity:70.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF11969; PF01230;
pfam_desc Scavenger mRNA decapping enzyme C-term binding; HIT domain;
pfam_id DcpS_C; HIT;
pfam_target db:Pfam-A.hmm|PF11969.8 evalue:8.2e-13 score:48.1 best_domain_score:47.6 name:DcpS_C; db:Pfam-A.hmm|PF01230.23 evalue:1.8e-22 score:79.1 best_domain_score:78.9 name:HIT;
sprot_desc Uncharacterized 13.2 kDa HIT-like protein in hisE 3'region;
sprot_id sp|P26724|YHIT_AZOBR;
sprot_target db:uniprot_sprot|sp|P26724|YHIT_AZOBR 1 124 evalue:4.9e-34 qcov:98.40 identity:57.30;
107938 106910 CDS
ID metaerg.pl|04658
allec_ids 1.2.1.83;
allgo_ids GO:0016491; GO:0055114; GO:0016620; GO:0019608;
allko_ids K00318; K13821; K00128; K00294; K19700;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109531326.1 1 342 evalue:1.1e-174 qcov:100.00 identity:90.60;
kegg_pathway_id 00380; 00120; 00641; 00640; 00650; 00561; 00220; 00903; 00330; 00620; 00280; 00010; 00310; 00631; 00340; 00410; 00071; 00251;
kegg_pathway_name Tryptophan metabolism; Bile acid biosynthesis; 3-Chloroacrylic acid degradation; Propanoate metabolism; Butanoate metabolism; Glycerolipid metabolism; Urea cycle and metabolism of amino groups; Limonene and pinene degradation; Arginine and proline metabolism; Pyruvate metabolism; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Lysine degradation; 1,2-Dichloroethane degradation; Histidine metabolism; beta-Alanine metabolism; Fatty acid metabolism; Glutamate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:9.3e-130 score:432.4 best_domain_score:432.3 name:Aldedh;
sp YES;
sprot_desc 3-succinoylsemialdehyde-pyridine dehydrogenase;
sprot_id sp|H8ZPX2|SAPD_PSESP;
sprot_target db:uniprot_sprot|sp|H8ZPX2|SAPD_PSESP 3 337 evalue:5.9e-106 qcov:98.00 identity:58.30;
106910 106996 lipoprotein_signal_peptide
ID metaerg.pl|04659
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.779766; 0.0227572; 24.8954; 3.63611; 29.334;
>Feature NODE_27_length_107866_cov_7.87431
673 2 CDS
ID metaerg.pl|04660
allec_ids 2.3.1.30;
allgo_ids GO:0005737; GO:0006535; GO:0009001; GO:0005829;
allko_ids K02536; K00640;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2168;s__UBA2168 sp002327525;
genomedb_acc GCA_002327525.1;
genomedb_target db:genomedb|GCA_002327525.1|DCWG01000086.1_3 5 224 evalue:1.0e-80 qcov:98.20 identity:68.80;
kegg_pathway_id 00920; 00540; 00272;
kegg_pathway_name Sulfur metabolism; Lipopolysaccharide biosynthesis; Cysteine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id CYSTSYN-PWY; SULFATE-CYS-PWY;
metacyc_pathway_name L-cysteine biosynthesis I;; superpathway of sulfate assimilation and cysteine biosynthesis;;
metacyc_pathway_type CYSTEINE-SYN;; Sulfur-Metabolism; Super-Pathways;;
pfam_acc PF06426;
pfam_desc Serine acetyltransferase, N-terminal;
pfam_id SATase_N;
pfam_target db:Pfam-A.hmm|PF06426.14 evalue:7.5e-40 score:134.8 best_domain_score:134.3 name:SATase_N;
sprot_desc Serine acetyltransferase;
sprot_id sp|P29847|CYSE_SALTY;
sprot_target db:uniprot_sprot|sp|P29847|CYSE_SALTY 28 224 evalue:2.8e-72 qcov:87.90 identity:67.00;
965 1897 CDS
ID metaerg.pl|04661
allec_ids 2.7.1.23;
allgo_ids GO:0003951; GO:0006741; GO:0005737; GO:0005524; GO:0046872; GO:0019674;
allko_ids K00858;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000037.1_43 11 303 evalue:4.3e-93 qcov:94.50 identity:58.70;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id NADPHOS-DEPHOS-PWY; PWY-5083;
metacyc_pathway_name NAD phosphorylation and dephosphorylation;; NAD/NADH phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; NAD-Metabolism;;
pfam_acc PF01513;
pfam_desc ATP-NAD kinase;
pfam_id NAD_kinase;
pfam_target db:Pfam-A.hmm|PF01513.21 evalue:4.7e-61 score:205.8 best_domain_score:205.2 name:NAD_kinase;
sprot_desc NAD kinase;
sprot_id sp|A6V2Y8|NADK_PSEA7;
sprot_target db:uniprot_sprot|sp|A6V2Y8|NADK_PSEA7 13 310 evalue:4.5e-89 qcov:96.10 identity:53.70;
1894 2946 CDS
ID metaerg.pl|04662
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E graminis;
genomedb_acc GCF_900111735.1;
genomedb_target db:genomedb|GCF_900111735.1|WP_074888027.1 26 340 evalue:8.1e-96 qcov:90.00 identity:52.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:7.4e-08 score:32.4 best_domain_score:31.7 name:Metallophos;
3567 2968 CDS
ID metaerg.pl|04663
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000037.1_42 1 194 evalue:8.5e-34 qcov:97.50 identity:45.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF12804;
pfam_desc MobA-like NTP transferase domain;
pfam_id NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF12804.7 evalue:2.8e-31 score:108.3 best_domain_score:108.0 name:NTP_transf_3;
4568 3564 CDS
ID metaerg.pl|04664
allko_ids K07402;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2168;s__UBA2168 sp002327525;
genomedb_acc GCA_002327525.1;
genomedb_target db:genomedb|GCA_002327525.1|DCWG01000086.1_5 1 317 evalue:4.1e-105 qcov:94.90 identity:63.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF13478; PF02625;
pfam_desc XdhC Rossmann domain; XdhC and CoxI family;
pfam_id XdhC_C; XdhC_CoxI;
pfam_target db:Pfam-A.hmm|PF13478.6 evalue:1.7e-38 score:131.2 best_domain_score:130.1 name:XdhC_C; db:Pfam-A.hmm|PF02625.16 evalue:4.3e-19 score:67.7 best_domain_score:66.2 name:XdhC_CoxI;
4710 6146 CDS
ID metaerg.pl|04665
allec_ids 3.1.-.-;
allgo_ids GO:0005737; GO:0004519; GO:0046872; GO:0003723; GO:0006364;
allko_ids K07576;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003254665;
genomedb_acc GCF_003254665.1;
genomedb_target db:genomedb|GCF_003254665.1|WP_111411709.1 1 469 evalue:6.1e-179 qcov:98.10 identity:66.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF10996; PF00753; PF07521;
pfam_desc Beta-Casp domain; Metallo-beta-lactamase superfamily; Zn-dependent metallo-hydrolase RNA specificity domain;
pfam_id Beta-Casp; Lactamase_B; RMMBL;
pfam_target db:Pfam-A.hmm|PF10996.8 evalue:1.1e-29 score:102.2 best_domain_score:101.6 name:Beta-Casp; db:Pfam-A.hmm|PF00753.27 evalue:3.3e-13 score:49.3 best_domain_score:47.8 name:Lactamase_B; db:Pfam-A.hmm|PF07521.12 evalue:8.1e-14 score:50.6 best_domain_score:49.6 name:RMMBL;
sprot_desc Ribonuclease TTHA0252;
sprot_id sp|Q5SLP1|RNSE_THET8;
sprot_target db:uniprot_sprot|sp|Q5SLP1|RNSE_THET8 1 463 evalue:5.4e-65 qcov:96.90 identity:37.80;
6193 7200 CDS
ID metaerg.pl|04666
allec_ids 1.-.-.-;
allgo_ids GO:0016705; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA4421;s__UBA4421 sp002390555;
genomedb_acc GCA_002390555.1;
genomedb_target db:genomedb|GCA_002390555.1|DGPT01000034.1_48 1 335 evalue:1.4e-134 qcov:100.00 identity:68.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-5826; PWY-2821; PWY-5271; PWY-4302; PWYG-321; PWY-6113; PWY-5987; PWY-5479; PWY-5469;
metacyc_pathway_name hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sesamin biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; LIGNAN-SYN;;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:2.1e-51 score:174.4 best_domain_score:174.1 name:Bac_luciferase;
sprot_desc hypothetical protein;
sprot_id sp|P9WM02|Y1360_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WM02|Y1360_MYCTO 1 323 evalue:1.3e-89 qcov:96.40 identity:49.20;
tigrfam_acc TIGR03617;
tigrfam_desc probable F420-dependent oxidoreductase, MSMEG_2256 family;
tigrfam_mainrole Unknown function;
tigrfam_name F420_MSMEG_2256;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR03617 evalue:9.1e-138 score:457.6 best_domain_score:457.5 name:TIGR03617;
7359 8039 CDS
ID metaerg.pl|04667
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF01464;
pfam_desc Transglycosylase SLT domain;
pfam_id SLT;
pfam_target db:Pfam-A.hmm|PF01464.20 evalue:4.9e-12 score:44.8 best_domain_score:44.1 name:SLT;
tm_num 1;
7359 8039 transmembrane_helix
ID metaerg.pl|04668
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology i7461-7529o;
8069 8941 CDS
ID metaerg.pl|04669
allec_ids 1.-.-.-;
allgo_ids GO:0016705; GO:0055114;
allko_ids K00320;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2168;s__UBA2168 sp002327525;
genomedb_acc GCA_002327525.1;
genomedb_target db:genomedb|GCA_002327525.1|DCWG01000029.1_12 6 289 evalue:3.3e-103 qcov:97.90 identity:64.90;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-5826; PWY-2821; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5987; PWY-5479;
metacyc_pathway_name hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:5e-48 score:163.4 best_domain_score:162.8 name:Bac_luciferase;
sprot_desc hypothetical protein;
sprot_id sp|P9WKN4|Y953_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WKN4|Y953_MYCTO 8 283 evalue:5.1e-50 qcov:95.20 identity:39.80;
tigrfam_acc TIGR03619;
tigrfam_desc probable F420-dependent oxidoreductase, Rv2161c family;
tigrfam_mainrole Unknown function;
tigrfam_name F420_Rv2161c;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR03619 evalue:9.3e-78 score:260.4 best_domain_score:260.1 name:TIGR03619;
9200 8949 CDS
ID metaerg.pl|04670
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E composti_A;
genomedb_acc GCF_001567565.1;
genomedb_target db:genomedb|GCF_001567565.1|WP_061239199.1 1 82 evalue:2.2e-28 qcov:98.80 identity:69.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P58040|YF7A_PSEAE;
sprot_target db:uniprot_sprot|sp|P58040|YF7A_PSEAE 1 82 evalue:3.5e-28 qcov:98.80 identity:65.90;
8949 9014 signal_peptide
ID metaerg.pl|04671
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
10324 9233 CDS
ID metaerg.pl|04672
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000032.1_13 1 363 evalue:1.2e-134 qcov:100.00 identity:62.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:4.1e-22 score:78.4 best_domain_score:77.1 name:Lactamase_B;
10516 13797 CDS
ID metaerg.pl|04673
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K05102; K08333; K08282; K08856; K08855; K05103; K08848; K08846; K04444; K05105; K11228; K08854; K08790; K11912; K08897; K07683; K07778; K08884; K05113; K08810; K05111; K11623; K04442; K00924; K04424; K07682; K03407; K07673; K11265; K02486; K08853; K04688; K05688; K05121; K02178; K07675; K04443; K08847; K01728; K04372; K05091; K02480; K04445; K05096; K05097; K05112; K08809; K04373; K05098; K08286; K01768;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__Marinimicrobium;s__Marinimicrobium agarilyticum;
genomedb_acc GCF_000423345.1;
genomedb_target db:genomedb|GCF_000423345.1|WP_051234632.1 229 1092 evalue:3.3e-127 qcov:79.00 identity:36.20;
kegg_pathway_id 04640; 04530; 04111; 04140; 04360; 04510; 00230; 04011; 04010; 02020; 04110; 04150; 00040; 05012;
kegg_pathway_name Hematopoietic cell lineage; Tight junction; Cell cycle - yeast; Regulation of autophagy; Axon guidance; Focal adhesion; Purine metabolism; MAPK signaling pathway - yeast; MAPK signaling pathway; Two-component system - General; Cell cycle; mTOR signaling pathway; Pentose and glucuronate interconversions; Parkinson's disease;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF03781; PF00069; PF07714;
pfam_desc Sulfatase-modifying factor enzyme 1; Protein kinase domain; Protein tyrosine kinase;
pfam_id FGE-sulfatase; Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF03781.16 evalue:2.6e-17 score:62.5 best_domain_score:60.6 name:FGE-sulfatase; db:Pfam-A.hmm|PF00069.25 evalue:2.2e-37 score:128.1 best_domain_score:127.5 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:3.1e-25 score:88.2 best_domain_score:78.1 name:Pkinase_Tyr;
14005 16008 CDS
ID metaerg.pl|04674
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__Simiduia;s__Simiduia agarivorans;
genomedb_acc GCF_000305785.2;
genomedb_target db:genomedb|GCF_000305785.2|WP_024330517.1 71 653 evalue:7.2e-61 qcov:87.40 identity:30.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF08479; PF03865;
pfam_desc POTRA domain, ShlB-type; Haemolysin secretion/activation protein ShlB/FhaC/HecB;
pfam_id POTRA_2; ShlB;
pfam_target db:Pfam-A.hmm|PF08479.11 evalue:1.7e-08 score:33.4 best_domain_score:28.9 name:POTRA_2; db:Pfam-A.hmm|PF03865.13 evalue:2.7e-19 score:69.0 best_domain_score:68.6 name:ShlB;
sp YES;
tm_num 1;
14005 14097 signal_peptide
ID metaerg.pl|04675
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
14005 16008 transmembrane_helix
ID metaerg.pl|04676
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology i14041-14109o;
16034 24823 CDS
ID metaerg.pl|04677
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Rhodanobacter;s__Rhodanobacter sp002001105;
genomedb_acc GCF_002001105.1;
genomedb_target db:genomedb|GCF_002001105.1|WP_077480708.1 39 2715 evalue:2.6e-123 qcov:91.40 identity:28.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF05860;
pfam_desc haemagglutination activity domain;
pfam_id Haemagg_act;
pfam_target db:Pfam-A.hmm|PF05860.13 evalue:6e-15 score:54.4 best_domain_score:54.4 name:Haemagg_act;
sp YES;
tigrfam_acc TIGR01901;
tigrfam_desc filamentous hemagglutinin family N-terminal domain;
tigrfam_name adhes_NPXG;
tigrfam_target db:TIGRFAMs.hmm|TIGR01901 evalue:1.8e-15 score:55.8 best_domain_score:55.8 name:TIGR01901;
16034 16144 signal_peptide
ID metaerg.pl|04678
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
24936 26189 CDS
ID metaerg.pl|04679
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005759; GO:0005739; GO:0003995; GO:0050660; GO:0016787; GO:0006635;
allko_ids K06446; K11410; K00248; K00253; K09478; K00252; K00120; K14448; K00249; K11731; K11729;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000032.1_14 1 417 evalue:4.8e-196 qcov:100.00 identity:78.50;
kegg_pathway_id 00280; 00310; 00624; 00626; 00361; 00380; 00930; 00632; 00903; 00650; 00640; 00410; 00071;
kegg_pathway_name Valine, leucine and isoleucine degradation; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Naphthalene and anthracene degradation; gamma-Hexachlorocyclohexane degradation; Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation; Limonene and pinene degradation; Butanoate metabolism; Propanoate metabolism; beta-Alanine metabolism; Fatty acid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id CARNMET-PWY; PWY-6544; PWY-699; PWY-2582;
metacyc_pathway_name L-carnitine degradation I;; superpathway of C28 brassinosteroid biosynthesis;; brassinosteroid biosynthesis I;; brassinosteroid biosynthesis II;;
metacyc_pathway_type CARN-DEG;; Super-Pathways;; Brassinosteroid-Biosynthesis;; Brassinosteroid-Biosynthesis;;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:7.7e-33 score:113.1 best_domain_score:112.5 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:1.1e-09 score:37.9 best_domain_score:37.0 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:2.9e-22 score:77.9 best_domain_score:77.1 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:5.7e-18 score:64.9 best_domain_score:64.1 name:Acyl-CoA_dh_N;
sprot_desc Acyl-CoA dehydrogenase family member 10;
sprot_id sp|Q6JQN1|ACD10_HUMAN;
sprot_target db:uniprot_sprot|sp|Q6JQN1|ACD10_HUMAN 50 405 evalue:8.3e-70 qcov:85.40 identity:40.60;
26215 27000 CDS
ID metaerg.pl|04680
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO42811.1 1 261 evalue:5.8e-22 qcov:100.00 identity:31.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF12706; PF13483;
pfam_desc Beta-lactamase superfamily domain; Beta-lactamase superfamily domain;
pfam_id Lactamase_B_2; Lactamase_B_3;
pfam_target db:Pfam-A.hmm|PF12706.7 evalue:2.8e-07 score:29.5 best_domain_score:29.0 name:Lactamase_B_2; db:Pfam-A.hmm|PF13483.6 evalue:4.9e-19 score:68.0 best_domain_score:67.5 name:Lactamase_B_3;
28648 27164 CDS
ID metaerg.pl|04681
allgo_ids GO:0016021; GO:0055085;
allko_ids K06902; K08219; K08217;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Phaeomarinobacteraceae;g__Phaeomarinobacter;s__Phaeomarinobacter ectocarpi;
genomedb_acc GCF_000689395.1;
genomedb_target db:genomedb|GCF_000689395.1|WP_081826442.1 1 485 evalue:5.2e-149 qcov:98.20 identity:56.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF11700; PF07690;
pfam_desc Vacuole effluxer Atg22 like; Major Facilitator Superfamily;
pfam_id ATG22; MFS_1;
pfam_target db:Pfam-A.hmm|PF11700.8 evalue:1.4e-30 score:105.7 best_domain_score:92.4 name:ATG22; db:Pfam-A.hmm|PF07690.16 evalue:1e-15 score:56.8 best_domain_score:45.2 name:MFS_1;
tm_num 12;
28648 27164 transmembrane_helix
ID metaerg.pl|04682
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology i27317-27376o27419-27472i27491-27559o27569-27637i27695-27763o27836-27904i28010-28078o28106-28174i28208-28276o28334-28402i28463-28531o28544-28603i;
28902 29747 CDS
ID metaerg.pl|04683
allec_ids 1.1.98.2; 1.-.-.-;
allgo_ids GO:0016705; GO:0055114; GO:0070967; GO:0052749; GO:0005975;
allko_ids K00320; K15510;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__GCA-2725285;s__GCA-2725285 sp002725285;
genomedb_acc GCA_002725285.1;
genomedb_target db:genomedb|GCA_002725285.1|MBP18520.1 1 279 evalue:5.5e-87 qcov:99.30 identity:58.40;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-4302; PWY-5271; PWY-5826; PWY-2821; PWY-5469; PWY-5479; PWY-5987; PWY-6113; PWYG-321;
metacyc_pathway_name aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:4.4e-50 score:170.1 best_domain_score:170.0 name:Bac_luciferase;
sprot_desc F420-dependent glucose-6-phosphate dehydrogenase;
sprot_id sp|A6WD69|FGD_KINRD;
sprot_target db:uniprot_sprot|sp|A6WD69|FGD_KINRD 16 222 evalue:3.9e-15 qcov:73.70 identity:31.70;
tigrfam_acc TIGR03619;
tigrfam_desc probable F420-dependent oxidoreductase, Rv2161c family;
tigrfam_mainrole Unknown function;
tigrfam_name F420_Rv2161c;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR03619 evalue:1e-67 score:227.5 best_domain_score:227.2 name:TIGR03619;
30158 31378 CDS
ID metaerg.pl|04684
allgo_ids GO:0016021; GO:0055085;
allko_ids K08219;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000332.1_23 8 398 evalue:2.0e-93 qcov:96.30 identity:51.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:6e-09 score:34.5 best_domain_score:22.8 name:MFS_1;
tm_num 12;
30158 31378 transmembrane_helix
ID metaerg.pl|04685
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology i30215-30271o30299-30367i30386-30454o30464-30532i30590-30658o30671-30730i30815-30883o30926-30985i30998-31066o31079-31138i31199-31267o31280-31348i;
32178 31381 CDS
ID metaerg.pl|04686
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015439;
allko_ids K02045; K01996; K06861; K02006; K02013; K01995;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas humi;
genomedb_acc GCF_001431415.1;
genomedb_target db:genomedb|GCF_001431415.1|WP_057631778.1 14 263 evalue:4.6e-35 qcov:94.30 identity:41.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-6166; PWY-6188; PWY-6135; PWY-6171;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; ; ; ; ;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.6e-07 score:30.7 best_domain_score:15.3 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.8e-17 score:63.4 best_domain_score:62.7 name:ABC_tran;
sprot_desc Hemin import ATP-binding protein HmuV;
sprot_id sp|Q3ICT8|HMUV_PSEHT;
sprot_target db:uniprot_sprot|sp|Q3ICT8|HMUV_PSEHT 14 262 evalue:7.4e-32 qcov:94.00 identity:36.00;
33191 32175 CDS
ID metaerg.pl|04687
allgo_ids GO:0005215; GO:0016020; GO:0005887; GO:0022857; GO:0033214;
allko_ids K02015;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Solimonas;s__Solimonas aquatica;
genomedb_acc GCF_900111015.1;
genomedb_target db:genomedb|GCF_900111015.1|WP_093280632.1 15 331 evalue:4.0e-60 qcov:93.80 identity:49.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF01032;
pfam_desc FecCD transport family;
pfam_id FecCD;
pfam_target db:Pfam-A.hmm|PF01032.18 evalue:2.1e-80 score:269.3 best_domain_score:269.0 name:FecCD;
sprot_desc Hemin transport system permease protein HmuU;
sprot_id sp|Q56992|HMUU_YERPE;
sprot_target db:uniprot_sprot|sp|Q56992|HMUU_YERPE 54 332 evalue:2.7e-47 qcov:82.50 identity:44.80;
tm_num 8;
33191 32175 transmembrane_helix
ID metaerg.pl|04688
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology i32232-32300o32358-32426i32445-32513o32526-32594i32631-32699o32757-32810i32904-32972o33093-33161i;
35823 33274 CDS
ID metaerg.pl|04689
allec_ids 4.3.1.32; 2.5.1.147; 2.5.1.77;
allgo_ids GO:0003824; GO:0051536; GO:0051539; GO:0016829; GO:0046872; GO:0016765; GO:0009108;
allko_ids K11779;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ga0077536;f__Ga0077536;g__Ga0077536;s__Ga0077536 sp001464935;
genomedb_acc GCA_001464935.1;
genomedb_target db:genomedb|GCA_001464935.1|LNEL01000064.1_262 7 821 evalue:0.0e+00 qcov:96.00 identity:71.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-5198;
metacyc_pathway_name factor 420 biosynthesis;;
metacyc_pathway_type Cofactor-Biosynthesis;;
pfam_acc PF04055;
pfam_desc Radical SAM superfamily;
pfam_id Radical_SAM;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:1.9e-28 score:99.2 best_domain_score:60.7 name:Radical_SAM;
sprot_desc FO synthase;
sprot_id sp|Q73WP9|FBIC_MYCPA;
sprot_target db:uniprot_sprot|sp|Q73WP9|FBIC_MYCPA 1 783 evalue:6.4e-202 qcov:92.20 identity:47.40;
tigrfam_acc TIGR00423; TIGR03550; TIGR03551;
tigrfam_desc radical SAM domain protein, CofH subfamily; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit;
tigrfam_mainrole Hypothetical proteins; Biosynthesis of cofactors, prosthetic groups, and carriers; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00423; F420_cofG; F420_cofH;
tigrfam_sub1role Conserved; Other; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00423 evalue:2e-129 score:430.5 best_domain_score:381.0 name:TIGR00423; db:TIGRFAMs.hmm|TIGR03550 evalue:9.6e-151 score:500.6 best_domain_score:461.7 name:TIGR03550; db:TIGRFAMs.hmm|TIGR03551 evalue:3.4e-170 score:564.6 best_domain_score:509.0 name:TIGR03551;
36551 35820 CDS
ID metaerg.pl|04690
allec_ids 2.7.7.68;
allgo_ids GO:0016779;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000029.1_16 1 219 evalue:3.1e-38 qcov:90.10 identity:47.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-5198;
metacyc_pathway_name factor 420 biosynthesis;;
metacyc_pathway_type Cofactor-Biosynthesis;;
pfam_acc PF01983; PF12804;
pfam_desc Guanylyl transferase CofC like; MobA-like NTP transferase domain;
pfam_id CofC; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF01983.16 evalue:4.1e-28 score:97.3 best_domain_score:97.0 name:CofC; db:Pfam-A.hmm|PF12804.7 evalue:3.1e-10 score:39.9 best_domain_score:38.9 name:NTP_transf_3;
tigrfam_acc TIGR03552;
tigrfam_desc 2-phospho-L-lactate guanylyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name F420_cofC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR03552 evalue:5.1e-48 score:162.5 best_domain_score:162.2 name:TIGR03552;
37540 36578 CDS
ID metaerg.pl|04691
allec_ids 2.7.8.28;
allgo_ids GO:0043743; GO:0000287; GO:0016780; GO:0009108;
allko_ids K11212;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000332.1_19 6 317 evalue:4.9e-108 qcov:97.50 identity:62.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-5198;
metacyc_pathway_name factor 420 biosynthesis;;
metacyc_pathway_type Cofactor-Biosynthesis;;
pfam_acc PF01933;
pfam_desc Uncharacterised protein family UPF0052;
pfam_id UPF0052;
pfam_target db:Pfam-A.hmm|PF01933.18 evalue:7.4e-46 score:155.9 best_domain_score:155.7 name:UPF0052;
sprot_desc Phosphoenolpyruvate transferase;
sprot_id sp|Q9KZK9|FBIA_STRCO;
sprot_target db:uniprot_sprot|sp|Q9KZK9|FBIA_STRCO 6 319 evalue:2.3e-59 qcov:98.10 identity:42.20;
tigrfam_acc TIGR01819;
tigrfam_desc 2-phospho-L-lactate transferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name F420_cofD;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01819 evalue:6.1e-90 score:300.4 best_domain_score:300.2 name:TIGR01819;
38313 37537 CDS
ID metaerg.pl|04692
allec_ids 6.3.2.31;
allgo_ids GO:0043773; GO:0052618; GO:0052619; GO:0005525; GO:0046872; GO:0009108; GO:0052645;
allko_ids K12234;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Starkeya_A;s__Starkeya_A novella;
genomedb_acc GCA_003241485.1;
genomedb_target db:genomedb|GCA_003241485.1|PZQ82942.1 1 258 evalue:3.0e-71 qcov:100.00 identity:62.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-5199;
metacyc_pathway_name factor 420 polyglutamylation;;
metacyc_pathway_type Cofactor-Biosynthesis;;
pfam_acc PF01996;
pfam_desc F420-0:Gamma-glutamyl ligase;
pfam_id F420_ligase;
pfam_target db:Pfam-A.hmm|PF01996.16 evalue:1.3e-60 score:204.1 best_domain_score:203.8 name:F420_ligase;
sprot_desc Coenzyme F420:L-glutamate ligase;
sprot_id sp|O27098|COFE_METTH;
sprot_target db:uniprot_sprot|sp|O27098|COFE_METTH 5 258 evalue:1.7e-49 qcov:98.40 identity:45.70;
tigrfam_acc TIGR01916;
tigrfam_desc coenzyme F420-0:L-glutamate ligase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name F420_cofE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01916 evalue:6.2e-81 score:270.6 best_domain_score:270.4 name:TIGR01916;
39018 38353 CDS
ID metaerg.pl|04693
allec_ids 1.5.1.40;
allgo_ids GO:0050661; GO:0102261; GO:0070967; GO:0052808; GO:0006740;
allko_ids K06988;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA4421;s__UBA4421 sp003230835;
genomedb_acc GCA_003230835.1;
genomedb_target db:genomedb|GCA_003230835.1|QIGT01000335.1_2 1 219 evalue:2.9e-91 qcov:99.10 identity:79.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF03807; PF03446;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id F420_oxidored; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:9.1e-20 score:70.3 best_domain_score:70.2 name:F420_oxidored; db:Pfam-A.hmm|PF03446.15 evalue:1.6e-05 score:24.4 best_domain_score:23.4 name:NAD_binding_2;
sprot_desc F420-dependent NADP reductase;
sprot_id sp|O29370|FNO_ARCFU;
sprot_target db:uniprot_sprot|sp|O29370|FNO_ARCFU 6 216 evalue:1.3e-26 qcov:95.50 identity:36.30;
tigrfam_acc TIGR01915;
tigrfam_desc NADPH-dependent F420 reductase;
tigrfam_mainrole Energy metabolism;
tigrfam_name npdG;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01915 evalue:2.6e-61 score:206.5 best_domain_score:206.2 name:TIGR01915;
39295 40215 CDS
ID metaerg.pl|04694
allec_ids 1.-.-.-;
allgo_ids GO:0016705; GO:0055114;
allko_ids K00320;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR32392.1 1 302 evalue:1.1e-101 qcov:98.70 identity:64.00;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-4302; PWY-5271; PWY-5826; PWY-2821; PWY-5469; PWY-5479; PWY-5987; PWY-6113; PWYG-321;
metacyc_pathway_name aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:2.4e-46 score:157.8 best_domain_score:157.6 name:Bac_luciferase;
tigrfam_acc TIGR03564;
tigrfam_desc F420-dependent oxidoreductase, MSMEG_4879 family;
tigrfam_mainrole Unknown function;
tigrfam_name F420_MSMEG_4879;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR03564 evalue:1.8e-95 score:318.7 best_domain_score:318.5 name:TIGR03564;
40251 40517 CDS
ID metaerg.pl|04695
allgo_ids GO:0043565;
allko_ids K00558; K00517; K14260; K00891; K10907; K01486; K00012;
kegg_pathway_id 00940; 00230; 00400; 00361; 00500; 00520; 00271; 00626; 00040; 00903;
kegg_pathway_name Phenylpropanoid biosynthesis; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; gamma-Hexachlorocyclohexane degradation; Starch and sucrose metabolism; Nucleotide sugars metabolism; Methionine metabolism; Naphthalene and anthracene degradation; Pentose and glucuronate interconversions; Limonene and pinene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF12844; PF01381; PF13560; PF13744;
pfam_desc Helix-turn-helix domain; Helix-turn-helix; Helix-turn-helix domain; Helix-turn-helix domain;
pfam_id HTH_19; HTH_3; HTH_31; HTH_37;
pfam_target db:Pfam-A.hmm|PF12844.7 evalue:9.4e-08 score:31.2 best_domain_score:30.7 name:HTH_19; db:Pfam-A.hmm|PF01381.22 evalue:4.5e-13 score:48.3 best_domain_score:47.8 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:1e-10 score:41.0 best_domain_score:41.0 name:HTH_31; db:Pfam-A.hmm|PF13744.6 evalue:9.2e-09 score:34.4 best_domain_score:34.0 name:HTH_37;
40811 41950 CDS
ID metaerg.pl|04696
allgo_ids GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A sulfidiphilus_A;
genomedb_acc GCF_000377945.1;
genomedb_target db:genomedb|GCF_000377945.1|WP_018954347.1 4 377 evalue:8.1e-118 qcov:98.70 identity:63.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00924;
pfam_desc Mechanosensitive ion channel;
pfam_id MS_channel;
pfam_target db:Pfam-A.hmm|PF00924.18 evalue:2.2e-52 score:176.8 best_domain_score:175.6 name:MS_channel;
tm_num 5;
40811 41950 transmembrane_helix
ID metaerg.pl|04697
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology o40931-40999i41057-41116o41144-41212i41249-41317o41330-41398i;
42012 42662 CDS
ID metaerg.pl|04698
allec_ids 2.1.1.17;
allgo_ids GO:0008168; GO:0004608; GO:0006656;
allko_ids K00599; K00568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalospirales_A;f__Halofilaceae;g__Halofilum;s__Halofilum ochraceum;
genomedb_acc GCF_001614315.2;
genomedb_target db:genomedb|GCF_001614315.2|WP_067563605.1 1 205 evalue:2.8e-75 qcov:94.90 identity:69.80;
kegg_pathway_id 00626; 00450; 00380; 00150; 00340; 00130; 00350;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tryptophan metabolism; Androgen and estrogen metabolism; Histidine metabolism; Ubiquinone biosynthesis; Tyrosine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF02353; PF08241; PF08242; PF13489; PF13649; PF13847; PF07021; PF01135; PF01209;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methionine biosynthesis protein MetW; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); ubiE/COQ5 methyltransferase family;
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; MetW; PCMT; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:3.8e-06 score:25.6 best_domain_score:25.3 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:5.5e-23 score:80.7 best_domain_score:80.2 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:8.6e-16 score:57.7 best_domain_score:57.2 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:1.3e-14 score:53.6 best_domain_score:53.4 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:4.4e-20 score:71.4 best_domain_score:70.9 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:7.7e-17 score:60.7 best_domain_score:60.4 name:Methyltransf_31; db:Pfam-A.hmm|PF07021.12 evalue:1.5e-06 score:27.1 best_domain_score:26.1 name:MetW; db:Pfam-A.hmm|PF01135.19 evalue:4.7e-05 score:22.5 best_domain_score:21.9 name:PCMT; db:Pfam-A.hmm|PF01209.18 evalue:1.1e-14 score:53.6 best_domain_score:53.1 name:Ubie_methyltran;
sprot_desc Phosphatidylethanolamine N-methyltransferase;
sprot_id sp|Q05197|PMTA_RHOSH;
sprot_target db:uniprot_sprot|sp|Q05197|PMTA_RHOSH 1 203 evalue:5.1e-39 qcov:94.00 identity:45.10;
42789 43364 CDS
ID metaerg.pl|04699
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Hahella;s__Hahella chejuensis;
genomedb_acc GCF_000012985.1;
genomedb_target db:genomedb|GCF_000012985.1|WP_011395484.1 1 191 evalue:3.9e-28 qcov:100.00 identity:43.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF09831;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2058);
pfam_id DUF2058;
pfam_target db:Pfam-A.hmm|PF09831.9 evalue:1.9e-46 score:157.6 best_domain_score:156.9 name:DUF2058;
44581 43634 CDS
ID metaerg.pl|04700
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax_A;s__Alcanivorax_A sp003259185;
genomedb_acc GCF_003259185.1;
genomedb_target db:genomedb|GCF_003259185.1|WP_111655534.1 4 315 evalue:4.0e-94 qcov:99.00 identity:54.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF05951; PF08291;
pfam_desc Bacterial protein of unknown function (DUF882); Peptidase M15;
pfam_id Peptidase_M15_2; Peptidase_M15_3;
pfam_target db:Pfam-A.hmm|PF05951.13 evalue:3.6e-06 score:26.0 best_domain_score:16.1 name:Peptidase_M15_2; db:Pfam-A.hmm|PF08291.11 evalue:2.9e-08 score:33.0 best_domain_score:32.3 name:Peptidase_M15_3;
sp YES;
tm_num 1;
43634 43696 signal_peptide
ID metaerg.pl|04701
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
44581 43634 transmembrane_helix
ID metaerg.pl|04702
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology i43646-43702o;
46299 44593 CDS
ID metaerg.pl|04703
allgo_ids GO:0016740;
allko_ids K01448;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax_A;s__Alcanivorax_A sp003259185;
genomedb_acc GCF_003259185.1;
genomedb_target db:genomedb|GCF_003259185.1|WP_111655533.1 9 554 evalue:1.0e-193 qcov:96.10 identity:64.60;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF01471; PF03734;
pfam_desc Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain;
pfam_id PG_binding_1; YkuD;
pfam_target db:Pfam-A.hmm|PF01471.18 evalue:9.5e-10 score:37.8 best_domain_score:36.5 name:PG_binding_1; db:Pfam-A.hmm|PF03734.14 evalue:5.8e-28 score:97.4 best_domain_score:96.8 name:YkuD;
sp YES;
44593 44670 signal_peptide
ID metaerg.pl|04704
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
46521 47171 CDS
ID metaerg.pl|04705
allgo_ids GO:0016747;
allko_ids K06957; K03828; K01207; K03824; K00619;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Parvibaculaceae;g__Parvibaculum;s__Parvibaculum sp002694985;
genomedb_acc GCA_002694985.1;
genomedb_target db:genomedb|GCA_002694985.1|MAM94756.1 5 210 evalue:5.1e-32 qcov:95.40 identity:42.30;
kegg_pathway_id 00220; 01032; 00530;
kegg_pathway_name Urea cycle and metabolism of amino groups; Glycan structures - degradation; Aminosugars metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00583; PF13673; PF13508; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:6.6e-11 score:41.7 best_domain_score:41.3 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:1.8e-12 score:46.6 best_domain_score:46.0 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:1.8e-08 score:33.9 best_domain_score:33.3 name:Acetyltransf_7; db:Pfam-A.hmm|PF08445.10 evalue:3.1e-07 score:29.5 best_domain_score:28.6 name:FR47;
48881 47451 CDS
ID metaerg.pl|04706
genomedb_OC d__Bacteria;p__Bdellovibrionota;c__Bacteriovoracia;o__UBA1018;f__UBA1018;g__GWA1-52-35;s__GWA1-52-35 sp001769805;
genomedb_acc GCA_001769805.1;
genomedb_target db:genomedb|GCA_001769805.1|OFZ05492.1 126 472 evalue:4.7e-70 qcov:72.90 identity:40.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
50612 48987 CDS
ID metaerg.pl|04707
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0070062; GO:1903561; GO:0016021; GO:0005634; GO:0005886; GO:0015111; GO:0008507; GO:0071320; GO:0071371; GO:0015705; GO:0006811; GO:0006590;
allko_ids K14385;
genomedb_OC d__Bacteria;p__Bdellovibrionota;c__Bdellovibrionia;o__Bdellovibrionales;f__UBA1609;g__UBA1609;s__UBA1609 sp002321895;
genomedb_acc GCA_002321895.1;
genomedb_target db:genomedb|GCA_002321895.1|DCMZ01000010.1_9 16 531 evalue:4.2e-152 qcov:95.40 identity:57.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00474;
pfam_desc Sodium:solute symporter family;
pfam_id SSF;
pfam_target db:Pfam-A.hmm|PF00474.17 evalue:6.7e-39 score:133.1 best_domain_score:132.7 name:SSF;
sprot_desc Sodium/iodide cotransporter;
sprot_id sp|Q92911|SC5A5_HUMAN;
sprot_target db:uniprot_sprot|sp|Q92911|SC5A5_HUMAN 17 461 evalue:3.0e-35 qcov:82.30 identity:29.60;
tigrfam_acc TIGR00813;
tigrfam_desc transporter, solute:sodium symporter (SSS) family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name sss;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR00813 evalue:9e-58 score:195.4 best_domain_score:195.0 name:TIGR00813;
tm_num 14;
50612 48987 transmembrane_helix
ID metaerg.pl|04708
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology o48996-49064i49158-49217o49227-49280i49341-49409o49452-49520i49557-49625o49683-49742i49818-49886o50001-50069i50130-50198o50226-50294i50313-50372o50382-50450i50511-50579o;
50852 52582 CDS
ID metaerg.pl|04709
allec_ids 2.4.1.352;
allgo_ids GO:0003824; GO:0005975; GO:0016757;
allko_ids K01182; K00690; K22597;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Mangrovitalea;s__Mangrovitalea sediminis;
genomedb_acc GCF_002514725.1;
genomedb_target db:genomedb|GCF_002514725.1|WP_097459254.1 4 575 evalue:1.1e-163 qcov:99.30 identity:52.30;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00128;
pfam_desc Alpha amylase, catalytic domain;
pfam_id Alpha-amylase;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:5e-14 score:51.8 best_domain_score:51.3 name:Alpha-amylase;
sprot_desc Glucosylglycerate phosphorylase;
sprot_id sp|D7BAR0|GGAP_MEISD;
sprot_target db:uniprot_sprot|sp|D7BAR0|GGAP_MEISD 47 530 evalue:8.9e-123 qcov:84.00 identity:46.10;
53847 52594 CDS
ID metaerg.pl|04710
allec_ids 2.4.1.266;
allgo_ids GO:0046872; GO:0016757;
allko_ids K13693;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Saccharospirillaceae;g__Oceanobacter;s__Oceanobacter sp002723385;
genomedb_acc GCA_002723385.1;
genomedb_target db:genomedb|GCA_002723385.1|MBM94562.1 1 404 evalue:3.0e-174 qcov:96.90 identity:70.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
sprot_desc Glucosyl-3-phosphoglycerate synthase;
sprot_id sp|C0QRQ2|GPGS_PERMH;
sprot_target db:uniprot_sprot|sp|C0QRQ2|GPGS_PERMH 1 401 evalue:4.8e-102 qcov:96.20 identity:46.90;
54701 53844 CDS
ID metaerg.pl|04711
allec_ids 3.1.3.70; 3.1.3.-;
allgo_ids GO:0005737; GO:0050897; GO:0000287; GO:0050531; GO:0016791; GO:0051479;
allko_ids K07026;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Ketobacteraceae;g__Ketobacter;s__Ketobacter sp002471665;
genomedb_acc GCA_002471665.1;
genomedb_target db:genomedb|GCA_002471665.1|DKQK01000071.1_45 13 279 evalue:2.8e-54 qcov:93.70 identity:45.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id NADPHOS-DEPHOS-PWY; PWY-5491; PWY-6456; PWY-5083; PWY-882; PWY-5656;
metacyc_pathway_name NAD phosphorylation and dephosphorylation;; diethylphosphate degradation;; serinol biosynthesis;; NAD/NADH phosphorylation and dephosphorylation;; L-ascorbate biosynthesis I (L-galactose pathway);; mannosylglycerate biosynthesis I;;
metacyc_pathway_type NAD-Metabolism;; Phosphorus-Compounds;; Polyamine-Biosynthesis;; NAD-Metabolism;; Ascorbate-Biosynthesis;; Mannosylglycerate-Biosynthesis;;
pfam_acc PF08282; PF05116;
pfam_desc haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase;
pfam_id Hydrolase_3; S6PP;
pfam_target db:Pfam-A.hmm|PF08282.12 evalue:2.4e-14 score:52.9 best_domain_score:28.1 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:2.9e-08 score:32.8 best_domain_score:20.7 name:S6PP;
sprot_desc Glucosyl-3-phosphoglycerate/mannosyl-3-phosphoglycerate phosphatase;
sprot_id sp|C0QRP9|GPMPP_PERMH;
sprot_target db:uniprot_sprot|sp|C0QRP9|GPMPP_PERMH 15 279 evalue:3.5e-35 qcov:93.00 identity:34.10;
tigrfam_acc TIGR01484; TIGR01486;
tigrfam_desc HAD hydrolase, family IIB; mannosyl-3-phosphoglycerate phosphatase family;
tigrfam_mainrole Unknown function;
tigrfam_name HAD-SF-IIB; HAD-SF-IIB-MPGP;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01484 evalue:1.4e-20 score:73.4 best_domain_score:73.1 name:TIGR01484; db:TIGRFAMs.hmm|TIGR01486 evalue:1.7e-65 score:220.0 best_domain_score:219.9 name:TIGR01486;
55790 54852 CDS
ID metaerg.pl|04712
allgo_ids GO:0016705; GO:0055114;
allko_ids K00320;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2965;s__UBA2965 sp002348385;
genomedb_acc GCA_002348385.1;
genomedb_target db:genomedb|GCA_002348385.1|DEBD01000028.1_77 1 307 evalue:9.3e-120 qcov:98.40 identity:64.50;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:8.4e-45 score:152.8 best_domain_score:143.7 name:Bac_luciferase;
56035 56448 CDS
ID metaerg.pl|04713
allgo_ids GO:0003700; GO:0006355; GO:0005829; GO:0032993; GO:0003677; GO:0001217; GO:0008198; GO:0044212; GO:0000976; GO:0008270; GO:0051350; GO:1900705; GO:0045892; GO:2000470; GO:1900376; GO:1901668; GO:0019290;
allko_ids K03711;
casgene_acc COG0640_csa3_CAS-I-A;
casgene_name csa3;
casgene_target db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:4.3e-06 score:26.3 best_domain_score:25.1 name:csa3;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_L;s__Pseudomonas_L hussainii;
genomedb_acc GCF_900109735.1;
genomedb_target db:genomedb|GCF_900109735.1|WP_071873046.1 1 133 evalue:1.5e-50 qcov:97.10 identity:72.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF01475;
pfam_desc Ferric uptake regulator family;
pfam_id FUR;
pfam_target db:Pfam-A.hmm|PF01475.19 evalue:4.3e-45 score:152.0 best_domain_score:151.8 name:FUR;
sprot_desc Ferric uptake regulation protein;
sprot_id sp|Q03456|FUR_PSEAE;
sprot_target db:uniprot_sprot|sp|Q03456|FUR_PSEAE 1 133 evalue:9.4e-47 qcov:97.10 identity:66.90;
57442 56648 CDS
ID metaerg.pl|04714
allec_ids 4.2.1.17;
allgo_ids GO:0003824; GO:0005777; GO:0004300; GO:0006635;
allko_ids K15016; K13767; K00022; K01692; K01782; K07516; K07515; K10527; K01825; K07511; K07514;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR32399.1 6 263 evalue:4.8e-85 qcov:97.70 identity:68.60;
kegg_pathway_id 00650; 00640; 00071; 00592; 00410; 01040; 00903; 00062; 00632; 00930; 00380; 00310; 00281; 00280;
kegg_pathway_name Butanoate metabolism; Propanoate metabolism; Fatty acid metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id FAO-PWY; ILEUDEG-PWY; PWY-5136; PWY-6435; PWY-561; VALDEG-PWY; P3-PWY; PWY-5138;
metacyc_pathway_name fatty acid β-oxidation I;; L-isoleucine degradation I;; fatty acid β-oxidation II (peroxisome);; 4-hydroxybenzoate biosynthesis III (plants);; superpathway of glyoxylate cycle and fatty acid degradation;; L-valine degradation I;; gallate degradation III (anaerobic);; unsaturated, even numbered fatty acid β-oxidation;;
metacyc_pathway_type Fatty-Acid-Degradation;; ISOLEUCINE-DEG;; Fatty-Acid-Degradation;; 4-Hydroxybenzoate-Biosynthesis;; Energy-Metabolism; Super-Pathways;; VALINE-DEG;; GALLATE-DEG;; Fatty-Acid-Degradation;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:2.5e-55 score:186.8 best_domain_score:186.5 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:9.1e-26 score:90.4 best_domain_score:89.6 name:ECH_2;
sprot_desc Probable enoyl-CoA hydratase 1, peroxisomal;
sprot_id sp|Q6NL24|ECH1P_ARATH;
sprot_target db:uniprot_sprot|sp|Q6NL24|ECH1P_ARATH 8 233 evalue:1.9e-40 qcov:85.60 identity:42.00;
58371 57439 CDS
ID metaerg.pl|04715
allec_ids 3.5.1.-;
allgo_ids GO:0016811; GO:0019740; GO:0006212;
allko_ids K00641; K01259; K09023;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Phaeomarinobacteraceae;g__Phaeomarinobacter;s__Phaeomarinobacter ectocarpi;
genomedb_acc GCF_000689395.1;
genomedb_target db:genomedb|GCF_000689395.1|WP_043949926.1 1 298 evalue:2.3e-78 qcov:96.10 identity:50.30;
kegg_pathway_id 00330; 00271; 00920;
kegg_pathway_name Arginine and proline metabolism; Methionine metabolism; Sulfur metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-6548; PWY-0; PWY-1822; PWY-5327; LYSDEGII-PWY; PWY-5784;
metacyc_pathway_name ; putrescine degradation III;; indole-3-acetate activation I;; superpathway of L-lysine degradation;; L-lysine degradation III;; indole-3-acetate inactivation VIII;;
metacyc_pathway_type ; Putrescine-Degradation;; Activation;; LYSINE-DEG; Super-Pathways;; LYSINE-DEG;; Indole-3-Acetate-Inactivation;;
pfam_acc PF00561; PF08386; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; TAP-like protein; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_4; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:2.2e-28 score:98.8 best_domain_score:91.3 name:Abhydrolase_1; db:Pfam-A.hmm|PF08386.10 evalue:1.8e-05 score:24.0 best_domain_score:21.3 name:Abhydrolase_4; db:Pfam-A.hmm|PF12697.7 evalue:6e-15 score:55.7 best_domain_score:55.3 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:8.2e-15 score:53.9 best_domain_score:50.4 name:Hydrolase_4;
sprot_desc Putative aminoacrylate hydrolase RutD;
sprot_id sp|B7KWT4|RUTD_METC4;
sprot_target db:uniprot_sprot|sp|B7KWT4|RUTD_METC4 11 289 evalue:3.7e-14 qcov:90.00 identity:29.30;
58529 59734 CDS
ID metaerg.pl|04716
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sneathiellales;f__Sneathiellaceae;g__Sneathiella;s__Sneathiella sp002428885;
genomedb_acc GCA_002428885.1;
genomedb_target db:genomedb|GCA_002428885.1|DIYE01000158.1_18 8 397 evalue:5.2e-107 qcov:97.30 identity:55.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00881;
pfam_desc Nitroreductase family;
pfam_id Nitroreductase;
pfam_target db:Pfam-A.hmm|PF00881.24 evalue:1.1e-10 score:41.0 best_domain_score:30.6 name:Nitroreductase;
sp YES;
58529 58642 signal_peptide
ID metaerg.pl|04717
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
59739 60209 CDS
ID metaerg.pl|04718
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sneathiellales;f__Sneathiellaceae;g__Sneathiella;s__Sneathiella sp002428885;
genomedb_acc GCA_002428885.1;
genomedb_target db:genomedb|GCA_002428885.1|DIYE01000158.1_19 13 155 evalue:6.1e-27 qcov:91.70 identity:49.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF13463; PF01047; PF12802;
pfam_desc Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id HTH_27; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF13463.6 evalue:2.7e-10 score:39.8 best_domain_score:39.0 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:8.9e-07 score:28.0 best_domain_score:27.2 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:3.2e-13 score:48.6 best_domain_score:48.2 name:MarR_2;
61227 60217 CDS
ID metaerg.pl|04719
allec_ids 1.4.1.9;
allgo_ids GO:0006520; GO:0016491; GO:0055114; GO:0050049; GO:0006552;
allko_ids K00263; K00261;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_F;s__Pseudomonas_F otitidis;
genomedb_acc GCF_900111835.1;
genomedb_target db:genomedb|GCF_900111835.1|WP_074970747.1 10 333 evalue:8.3e-82 qcov:96.40 identity:54.60;
kegg_pathway_id 00471; 00280; 00910; 00251; 00330; 00290;
kegg_pathway_name D-Glutamine and D-glutamate metabolism; Valine, leucine and isoleucine degradation; Nitrogen metabolism; Glutamate metabolism; Arginine and proline metabolism; Valine, leucine and isoleucine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00208; PF02812;
pfam_desc Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF00208.21 evalue:3.7e-16 score:58.8 best_domain_score:43.0 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:6e-19 score:67.4 best_domain_score:66.8 name:ELFV_dehydrog_N;
sprot_desc Leucine dehydrogenase;
sprot_id sp|P13154|DHLE_GEOSE;
sprot_target db:uniprot_sprot|sp|P13154|DHLE_GEOSE 15 334 evalue:1.5e-58 qcov:95.20 identity:42.50;
61448 62695 CDS
ID metaerg.pl|04720
allgo_ids GO:0016021; GO:0055085; GO:0005887; GO:0042910; GO:0006855;
allko_ids K07552; K08219; K08217; K08221; K08169;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA7887;f__GCA-2721365;g__GCA-2721365;s__GCA-2721365 sp002721365;
genomedb_acc GCA_002721365.1;
genomedb_target db:genomedb|GCA_002721365.1|MBL29497.1 13 396 evalue:1.6e-98 qcov:92.50 identity:54.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF07690; PF00083;
pfam_desc Major Facilitator Superfamily; Sugar (and other) transporter;
pfam_id MFS_1; Sugar_tr;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:1.8e-43 score:148.0 best_domain_score:148.0 name:MFS_1; db:Pfam-A.hmm|PF00083.24 evalue:2.1e-09 score:36.0 best_domain_score:36.0 name:Sugar_tr;
sprot_desc Uncharacterized MFS-type transporter YdgK;
sprot_id sp|P96709|YDGK_BACSU;
sprot_target db:uniprot_sprot|sp|P96709|YDGK_BACSU 12 377 evalue:6.8e-32 qcov:88.20 identity:29.00;
tigrfam_acc TIGR00710;
tigrfam_desc drug resistance transporter, Bcr/CflA subfamily;
tigrfam_name efflux_Bcr_CflA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00710 evalue:2.8e-79 score:266.5 best_domain_score:266.1 name:TIGR00710;
tm_num 10;
61448 62695 transmembrane_helix
ID metaerg.pl|04721
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology i61481-61549o61577-61645i61682-61741o61751-61819i61853-61921o61931-61999i62102-62170o62198-62257i62294-62362o62555-62623i;
62769 63719 CDS
ID metaerg.pl|04722
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Algiphilaceae;g__Algiphilus;s__Algiphilus aromaticivorans;
genomedb_acc GCF_000733765.1;
genomedb_target db:genomedb|GCF_000733765.1|WP_084191406.1 23 287 evalue:5.0e-12 qcov:83.90 identity:30.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF05235;
pfam_desc CHAD domain;
pfam_id CHAD;
pfam_target db:Pfam-A.hmm|PF05235.14 evalue:6.6e-18 score:64.8 best_domain_score:64.8 name:CHAD;
63716 64591 CDS
ID metaerg.pl|04723
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__SZUA-229;f__SZUA-229;g__SZUA-116;s__SZUA-116 sp003229115;
genomedb_acc GCA_003229115.1;
genomedb_target db:genomedb|GCA_003229115.1|QIHT01000132.1_4 57 290 evalue:2.3e-48 qcov:80.40 identity:43.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF04333;
pfam_desc MlaA lipoprotein;
pfam_id MlaA;
pfam_target db:Pfam-A.hmm|PF04333.13 evalue:3.6e-64 score:215.3 best_domain_score:215.1 name:MlaA;
68118 64543 CDS
ID metaerg.pl|04724
allgo_ids GO:0006355;
allko_ids K03388; K02668; K08479; K07674; K11614; K07716; K02489; K01768; K07710; K02480; K02482; K08801; K07636; K07653; K07701; K02030; K11527; K13587; K07678; K01769; K04518; K06379; K10681; K07676; K07709; K07644; K14509; K07769; K11383; K02486; K02342; K10125; K02476; K11357; K11617; K04757; K13040; K10942; K07647; K07680; K07675; K11637; K07649; K07682; K00936; K07777; K07654; K03407; K08475; K01120; K07673; K04093; K07641; K13598; K07646; K07652; K07768; K02575; K07778; K07683; K11354; K13533; K07711; K07648; K07679; K07718; K07698; K07651; K11711; K07642; K02484; K04486; K07677; K07645; K07708; K08282; K07704; K11231; K01090; K02491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000340.1_6 8 1182 evalue:2.9e-270 qcov:98.70 identity:45.10;
kegg_pathway_id 00790; 00340; 02020; 04011; 03090; 00400; 05111; 00230; 03030;
kegg_pathway_name Folate biosynthesis; Histidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system; Phenylalanine, tyrosine and tryptophan biosynthesis; Vibrio cholerae pathogenic cycle; Purine metabolism; DNA replication;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00563; PF00990; PF00989; PF08447; PF08448; PF13188; PF13426;
pfam_desc EAL domain; Diguanylate cyclase, GGDEF domain; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain;
pfam_id EAL; GGDEF; PAS; PAS_3; PAS_4; PAS_8; PAS_9;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:3.2e-78 score:261.8 best_domain_score:260.9 name:EAL; db:Pfam-A.hmm|PF00990.21 evalue:5.8e-53 score:178.2 best_domain_score:177.2 name:GGDEF; db:Pfam-A.hmm|PF00989.25 evalue:7.8e-49 score:163.6 best_domain_score:37.1 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:6.3e-20 score:70.5 best_domain_score:29.7 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:1.9e-40 score:136.7 best_domain_score:39.2 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:8.5e-36 score:120.6 best_domain_score:30.6 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:2.1e-43 score:146.0 best_domain_score:36.6 name:PAS_9;
tigrfam_acc TIGR00229; TIGR00254;
tigrfam_desc PAS domain S-box protein; diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Regulatory functions; Signal transduction;
tigrfam_name sensory_box; GGDEF;
tigrfam_sub1role Small molecule interactions; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:2.8e-77 score:256.1 best_domain_score:65.2 name:TIGR00229; db:TIGRFAMs.hmm|TIGR00254 evalue:3.1e-43 score:146.5 best_domain_score:145.6 name:TIGR00254;
tm_num 3;
68118 64543 transmembrane_helix
ID metaerg.pl|04725
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology i64576-64644o64687-64740i64777-64833o;
68282 68731 CDS
ID metaerg.pl|04726
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalospirales;f__Thiohalospiraceae;g__Thiohalospira;s__Thiohalospira halophila;
genomedb_acc GCF_900112605.1;
genomedb_target db:genomedb|GCF_900112605.1|WP_093428518.1 15 149 evalue:1.5e-46 qcov:90.60 identity:67.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF01894;
pfam_desc Uncharacterised protein family UPF0047;
pfam_id UPF0047;
pfam_target db:Pfam-A.hmm|PF01894.17 evalue:5.4e-33 score:112.8 best_domain_score:112.6 name:UPF0047;
sprot_desc hypothetical protein;
sprot_id sp|P74125|Y1880_SYNY3;
sprot_target db:uniprot_sprot|sp|P74125|Y1880_SYNY3 14 147 evalue:3.2e-32 qcov:89.90 identity:51.50;
tigrfam_acc TIGR00149;
tigrfam_desc secondary thiamine-phosphate synthase enzyme;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00149_YjbQ;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00149 evalue:1.1e-35 score:121.5 best_domain_score:121.2 name:TIGR00149;
69136 68744 CDS
ID metaerg.pl|04727
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000096.1_33 1 127 evalue:8.3e-22 qcov:97.70 identity:43.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
69372 70511 CDS
ID metaerg.pl|04728
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005618; GO:0050660;
allko_ids K00249; K11731; K00253; K00248; K14448;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA11889;s__UBA11889 sp002715785;
genomedb_acc GCA_002715785.1;
genomedb_target db:genomedb|GCA_002715785.1|MBG71469.1 1 379 evalue:1.4e-149 qcov:100.00 identity:69.50;
kegg_pathway_id 00650; 00640; 00410; 00071; 00280;
kegg_pathway_name Butanoate metabolism; Propanoate metabolism; beta-Alanine metabolism; Fatty acid metabolism; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-2582; PWY-6544; PWY-699; CARNMET-PWY;
metacyc_pathway_name brassinosteroid biosynthesis II;; superpathway of C28 brassinosteroid biosynthesis;; brassinosteroid biosynthesis I;; L-carnitine degradation I;;
metacyc_pathway_type Brassinosteroid-Biosynthesis;; Super-Pathways;; Brassinosteroid-Biosynthesis;; CARN-DEG;;
pfam_acc PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF02770.19 evalue:4.1e-21 score:74.2 best_domain_score:73.6 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:9.7e-23 score:80.2 best_domain_score:79.5 name:Acyl-CoA_dh_N;
sprot_desc Putative acyl-CoA dehydrogenase FadE17;
sprot_id sp|P95280|ACD17_MYCTU;
sprot_target db:uniprot_sprot|sp|P95280|ACD17_MYCTU 10 332 evalue:5.4e-44 qcov:85.20 identity:33.80;
70508 71617 CDS
ID metaerg.pl|04729
allgo_ids GO:0016627; GO:0055114;
allko_ids K00249;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Ferrovibrionales;f__Ferrovibrionaceae;g__Ferrovibrio;s__Ferrovibrio sp002482765;
genomedb_acc GCA_002482765.1;
genomedb_target db:genomedb|GCA_002482765.1|DLGP01000020.1_38 6 366 evalue:2.7e-65 qcov:97.80 identity:45.70;
kegg_pathway_id 00410; 00071; 00640; 00280;
kegg_pathway_name beta-Alanine metabolism; Fatty acid metabolism; Propanoate metabolism; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00441; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:1.7e-15 score:56.7 best_domain_score:55.7 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF02771.16 evalue:4.5e-05 score:23.3 best_domain_score:22.5 name:Acyl-CoA_dh_N;
71580 73055 CDS
ID metaerg.pl|04730
allec_ids 4.1.99.3;
allgo_ids GO:0003904; GO:0003677; GO:0000166; GO:0006281; GO:0018298;
allko_ids K01669;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003030865;
genomedb_acc GCF_003030865.2;
genomedb_target db:genomedb|GCF_003030865.2|WP_107182437.1 19 482 evalue:9.8e-140 qcov:94.50 identity:54.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00875; PF03441;
pfam_desc DNA photolyase; FAD binding domain of DNA photolyase;
pfam_id DNA_photolyase; FAD_binding_7;
pfam_target db:Pfam-A.hmm|PF00875.18 evalue:2.9e-44 score:150.2 best_domain_score:149.4 name:DNA_photolyase; db:Pfam-A.hmm|PF03441.14 evalue:1.2e-81 score:272.3 best_domain_score:271.8 name:FAD_binding_7;
sprot_desc Deoxyribodipyrimidine photo-lyase;
sprot_id sp|P25078|PHR_SALTY;
sprot_target db:uniprot_sprot|sp|P25078|PHR_SALTY 19 483 evalue:2.9e-106 qcov:94.70 identity:44.40;
73127 75025 CDS
ID metaerg.pl|04731
allgo_ids GO:0000155; GO:0007165;
allko_ids K07652; K07646; K13598; K07641; K07673; K01120; K08475; K07639; K03407; K07637; K07654; K07777; K00936; K07682; K07649; K07651; K07698; K07718; K02478; K07679; K07648; K00873; K07711; K11328; K13533; K11354; K07683; K07778; K11633; K02575; K07768; K11356; K11640; K02484; K07642; K11711; K13490; K02491; K01090; K07643; K11231; K10909; K07704; K08282; K01937; K07677; K07645; K07708; K07710; K07640; K01768; K07656; K02489; K07697; K07716; K08479; K07674; K10916; K02668; K03388; K07678; K10715; K13587; K02030; K11527; K07653; K07638; K07636; K14489; K08801; K02482; K02480; K07644; K13532; K07709; K07650; K10681; K07676; K06379; K01769; K07717; K07675; K07680; K07647; K10942; K13040; K04757; K11357; K11629; K10125; K11383; K00384; K13761; K02486; K12767; K11520; K14509; K07769;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ga0077536;f__Ga0077536;g__Ga0077536;s__Ga0077536 sp001464935;
genomedb_acc GCA_001464935.1;
genomedb_target db:genomedb|GCA_001464935.1|LNEL01000064.1_219 132 622 evalue:5.9e-89 qcov:77.70 identity:40.10;
kegg_pathway_id 00240; 05111; 00230; 00710; 00010; 00790; 03090; 00620; 04011; 02020;
kegg_pathway_name Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Folate biosynthesis; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF06490; PF02518; PF00512; PF08447; PF08448; PF00072;
pfam_desc Flagellar regulatory protein FleQ; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; Response regulator receiver domain;
pfam_id FleQ; HATPase_c; HisKA; PAS_3; PAS_4; Response_reg;
pfam_target db:Pfam-A.hmm|PF06490.11 evalue:0.00012 score:21.6 best_domain_score:20.8 name:FleQ; db:Pfam-A.hmm|PF02518.26 evalue:2.7e-21 score:75.4 best_domain_score:74.4 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.9e-11 score:43.1 best_domain_score:41.6 name:HisKA; db:Pfam-A.hmm|PF08447.12 evalue:2.5e-20 score:71.8 best_domain_score:68.2 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:3.1e-06 score:26.6 best_domain_score:21.6 name:PAS_4; db:Pfam-A.hmm|PF00072.24 evalue:2.4e-21 score:75.2 best_domain_score:73.9 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:3.3e-10 score:39.3 best_domain_score:37.7 name:TIGR00229;
75031 75888 CDS
ID metaerg.pl|04732
allec_ids 3.1.2.-;
allgo_ids GO:0047617; GO:0006637;
allko_ids K10805;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000213.1_12 1 281 evalue:2.1e-81 qcov:98.60 identity:55.60;
kegg_pathway_id 01040;
kegg_pathway_name Biosynthesis of unsaturated fatty acids;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-5838; PWY-5861; PWY-5850; PWY-5899; PWY-981; PWY-6453; PWY-5791; PWY-5897; ALL-CHORISMATE-PWY; PWY-5996; PWY0-1337; PWY-5898; PWY-5863; PWY-5862; PWY-5845; PWY-5896; PWY-5860; PWY-5837; PWY-6320; PWY-5840;
metacyc_pathway_name superpathway of menaquinol-8 biosynthesis I;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; salicylate biosynthesis II;; stigma estolide biosynthesis;; ; superpathway of menaquinol-11 biosynthesis;; superpathway of chorismate metabolism;; oleate biosynthesis II (animals and fungi);; oleate β-oxidation;; superpathway of menaquinol-12 biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-6 biosynthesis I;; 2-carboxy-1,4-naphthoquinol biosynthesis;; phaselate biosynthesis;; superpathway of menaquinol-7 biosynthesis;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Salicylate-Biosynthesis;; Lipid-Biosynthesis;; ; Menaquinone-Biosynthesis; Super-Pathways;; Super-Pathways;; Oleate-Biosynthesis;; Fatty-Acid-Degradation;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; DHNA-Biosynthesis;; AROMATIC-COMPOUNDS-BIOSYN;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF13622; PF02551;
pfam_desc Thioesterase-like superfamily; Acyl-CoA thioesterase;
pfam_id 4HBT_3; Acyl_CoA_thio;
pfam_target db:Pfam-A.hmm|PF13622.6 evalue:1.2e-56 score:191.9 best_domain_score:191.6 name:4HBT_3; db:Pfam-A.hmm|PF02551.15 evalue:1.3e-35 score:121.3 best_domain_score:90.8 name:Acyl_CoA_thio;
sprot_desc Acyl-CoA thioesterase 2;
sprot_id sp|P0AGG3|TESB_ECO57;
sprot_target db:uniprot_sprot|sp|P0AGG3|TESB_ECO57 1 279 evalue:1.8e-60 qcov:97.90 identity:45.80;
76952 75900 CDS
ID metaerg.pl|04733
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF01841;
pfam_desc Transglutaminase-like superfamily;
pfam_id Transglut_core;
pfam_target db:Pfam-A.hmm|PF01841.19 evalue:1.1e-17 score:63.8 best_domain_score:63.1 name:Transglut_core;
76994 77084 tRNA
ID metaerg.pl|04734
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
name tRNA_???_agtt;
77218 78894 CDS
ID metaerg.pl|04735
allec_ids 6.1.1.18;
allgo_ids GO:0004812; GO:0005524; GO:0043039; GO:0005737; GO:0004819; GO:0006425; GO:0006424;
allko_ids K01886;
genomedb_OC d__Bacteria;p__Binatota;c__Binatia;o__Bin18;f__Bin18;g__Bin18;s__Bin18 sp002238415;
genomedb_acc GCA_002238415.1;
genomedb_target db:genomedb|GCA_002238415.1|MPMI01000005.1_25 6 558 evalue:3.5e-210 qcov:99.10 identity:63.10;
kegg_pathway_id 00970; 00251;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Glutamate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00749; PF03950;
pfam_desc tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain;
pfam_id tRNA-synt_1c; tRNA-synt_1c_C;
pfam_target db:Pfam-A.hmm|PF00749.21 evalue:3.8e-106 score:353.8 best_domain_score:353.1 name:tRNA-synt_1c; db:Pfam-A.hmm|PF03950.18 evalue:1.3e-54 score:183.9 best_domain_score:183.4 name:tRNA-synt_1c_C;
sprot_desc Glutamine--tRNA ligase;
sprot_id sp|Q88IU5|SYQ_PSEPK;
sprot_target db:uniprot_sprot|sp|Q88IU5|SYQ_PSEPK 9 557 evalue:6.1e-193 qcov:98.40 identity:59.60;
tigrfam_acc TIGR00440;
tigrfam_desc glutamine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name glnS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00440 evalue:3e-215 score:715.2 best_domain_score:715.0 name:TIGR00440;
78978 79892 CDS
ID metaerg.pl|04736
allec_ids 4.1.3.4;
allgo_ids GO:0003824; GO:0005759; GO:0005739; GO:0005777; GO:0004419; GO:0000287; GO:0030145; GO:0046872; GO:0042803; GO:0005102; GO:0046951; GO:0006552; GO:0006629; GO:0007005; GO:0051262;
allko_ids K01649; K01666; K01640;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000213.1_15 1 299 evalue:5.2e-107 qcov:98.40 identity:67.20;
kegg_pathway_id 00280; 00290; 00622; 00621; 00362; 00072; 00620; 00650; 00643; 00360;
kegg_pathway_name Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Toluene and xylene degradation; Biphenyl degradation; Benzoate degradation via hydroxylation; Synthesis and degradation of ketone bodies; Pyruvate metabolism; Butanoate metabolism; Styrene degradation; Phenylalanine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id LEU-DEG2-PWY; PWY-5074;
metacyc_pathway_name L-leucine degradation I;; mevalonate degradation;;
metacyc_pathway_type LEUCINE-DEG;; CARBOXYLATES-DEG;;
pfam_acc PF00682;
pfam_desc HMGL-like;
pfam_id HMGL-like;
pfam_target db:Pfam-A.hmm|PF00682.19 evalue:1.1e-40 score:139.1 best_domain_score:139.0 name:HMGL-like;
sprot_desc Hydroxymethylglutaryl-CoA lyase, mitochondrial;
sprot_id sp|Q29448|HMGCL_BOVIN;
sprot_target db:uniprot_sprot|sp|Q29448|HMGCL_BOVIN 2 295 evalue:2.1e-54 qcov:96.70 identity:39.70;
79893 81074 CDS
ID metaerg.pl|04737
allec_ids 2.8.3.20;
allgo_ids GO:0003824; GO:0008410; GO:0043961; GO:0043427;
allko_ids K14472; K18313;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000213.1_17 3 393 evalue:8.3e-158 qcov:99.50 identity:70.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF02515;
pfam_desc CoA-transferase family III;
pfam_id CoA_transf_3;
pfam_target db:Pfam-A.hmm|PF02515.17 evalue:2.4e-130 score:434.2 best_domain_score:434.0 name:CoA_transf_3;
sprot_desc Succinyl-CoA--D-citramalate CoA-transferase;
sprot_id sp|A9WGE3|SCCT_CHLAA;
sprot_target db:uniprot_sprot|sp|A9WGE3|SCCT_CHLAA 2 389 evalue:1.3e-136 qcov:98.70 identity:58.40;
81105 81500 CDS
ID metaerg.pl|04738
allko_ids K01759;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__Pseudohongiella;s__Pseudohongiella sp002711845;
genomedb_acc GCA_002711845.1;
genomedb_target db:genomedb|GCA_002711845.1|MBC52362.1 1 131 evalue:1.3e-38 qcov:100.00 identity:57.90;
kegg_pathway_id 04011; 00620;
kegg_pathway_name MAPK signaling pathway - yeast; Pyruvate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00903; PF18029;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase-like domain;
pfam_id Glyoxalase; Glyoxalase_6;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:1.4e-11 score:43.9 best_domain_score:43.6 name:Glyoxalase; db:Pfam-A.hmm|PF18029.1 evalue:2e-05 score:24.6 best_domain_score:23.2 name:Glyoxalase_6;
81497 82153 CDS
ID metaerg.pl|04739
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000071.1_14 16 213 evalue:2.0e-60 qcov:90.80 identity:62.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF08761;
pfam_desc dUTPase;
pfam_id dUTPase_2;
pfam_target db:Pfam-A.hmm|PF08761.11 evalue:2.4e-32 score:111.6 best_domain_score:110.8 name:dUTPase_2;
82313 83116 CDS
ID metaerg.pl|04740
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000071.1_12 8 262 evalue:9.5e-113 qcov:95.50 identity:74.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:5.9e-12 score:45.7 best_domain_score:45.2 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:1e-14 score:54.3 best_domain_score:51.8 name:Metallophos_2;
83113 84147 CDS
ID metaerg.pl|04741
allko_ids K13677; K00749; K00712; K02844;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR31420.1 3 337 evalue:1.0e-114 qcov:97.40 identity:62.70;
kegg_pathway_id 00540; 01031;
kegg_pathway_name Lipopolysaccharide biosynthesis; Glycan structures - biosynthesis 2;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00534; PF13439; PF13692; PF13579;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1; Glycosyl transferase 4-like domain;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_4; Glyco_trans_4_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:1.5e-16 score:59.7 best_domain_score:58.5 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:3.2e-16 score:59.0 best_domain_score:57.6 name:Glyco_transf_4; db:Pfam-A.hmm|PF13692.6 evalue:3.8e-18 score:65.4 best_domain_score:64.5 name:Glyco_trans_1_4; db:Pfam-A.hmm|PF13579.6 evalue:3.6e-08 score:33.3 best_domain_score:27.6 name:Glyco_trans_4_4;
84217 84789 CDS
ID metaerg.pl|04742
allgo_ids GO:0016787;
allko_ids K03574; K08310;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000338.1_4 44 182 evalue:1.1e-30 qcov:73.20 identity:51.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:2.2e-13 score:49.6 best_domain_score:49.1 name:NUDIX;
84964 86940 CDS
ID metaerg.pl|04743
allgo_ids GO:0009279; GO:0016021; GO:0015232;
allko_ids K16087;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Algiphilaceae;g__Algiphilus;s__Algiphilus aromaticivorans;
genomedb_acc GCF_000733765.1;
genomedb_target db:genomedb|GCF_000733765.1|WP_084191263.1 6 655 evalue:1.6e-169 qcov:98.80 identity:50.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF07715; PF00593;
pfam_desc TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:1.4e-22 score:79.5 best_domain_score:79.5 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:8.5e-52 score:176.8 best_domain_score:176.8 name:TonB_dep_Rec;
sp YES;
sprot_desc Heme/hemopexin utilization protein C;
sprot_id sp|Q4QNS6|HXUC_HAEI8;
sprot_target db:uniprot_sprot|sp|Q4QNS6|HXUC_HAEI8 65 654 evalue:2.6e-57 qcov:89.70 identity:27.80;
tigrfam_acc TIGR01785; TIGR01786;
tigrfam_desc TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein;
tigrfam_mainrole Transport and binding proteins; Transport and binding proteins;
tigrfam_name TonB-hemin; TonB-hemlactrns;
tigrfam_sub1role Porins; Porins;
tigrfam_target db:TIGRFAMs.hmm|TIGR01785 evalue:2.2e-133 score:445.2 best_domain_score:445.0 name:TIGR01785; db:TIGRFAMs.hmm|TIGR01786 evalue:6.4e-105 score:351.2 best_domain_score:350.9 name:TIGR01786;
84964 85023 signal_peptide
ID metaerg.pl|04744
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
86927 87688 CDS
ID metaerg.pl|04745
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0022857; GO:0009877;
allko_ids K02052; K02006; K01997; K06861; K01996; K02045; K10111; K01998; K01995; K02023; K01990; K09695;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium;s__Methylobacterium sp001425465;
genomedb_acc GCF_001425465.1;
genomedb_target db:genomedb|GCF_001425465.1|WP_056240128.1 12 245 evalue:7.0e-65 qcov:92.50 identity:57.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6171; PWY-6135; PWY-6188; PWY-6166;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2e-12 score:46.8 best_domain_score:34.1 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:5.5e-27 score:94.2 best_domain_score:93.7 name:ABC_tran;
sprot_desc Nod factor export ATP-binding protein I;
sprot_id sp|Q39GT7|NODI_BURL3;
sprot_target db:uniprot_sprot|sp|Q39GT7|NODI_BURL3 15 243 evalue:1.1e-32 qcov:90.50 identity:38.90;
87685 89082 CDS
ID metaerg.pl|04746
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__12-FULL-67-14b;s__12-FULL-67-14b sp002737365;
genomedb_acc GCA_002737365.1;
genomedb_target db:genomedb|GCA_002737365.1|PHY08235.1 1 453 evalue:7.7e-86 qcov:97.40 identity:40.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF01061; PF12679; PF12698; PF12730; PF12040;
pfam_desc ABC-2 type transporter; ABC-2 family transporter protein; ABC-2 family transporter protein; ABC-2 family transporter protein; Domain of unknown function (DUF3526);
pfam_id ABC2_membrane; ABC2_membrane_2; ABC2_membrane_3; ABC2_membrane_4; DUF3526;
pfam_target db:Pfam-A.hmm|PF01061.24 evalue:4.8e-07 score:28.6 best_domain_score:26.5 name:ABC2_membrane; db:Pfam-A.hmm|PF12679.7 evalue:9.4e-25 score:86.7 best_domain_score:86.2 name:ABC2_membrane_2; db:Pfam-A.hmm|PF12698.7 evalue:4.3e-08 score:31.9 best_domain_score:31.1 name:ABC2_membrane_3; db:Pfam-A.hmm|PF12730.7 evalue:2.3e-09 score:36.7 best_domain_score:34.6 name:ABC2_membrane_4; db:Pfam-A.hmm|PF12040.8 evalue:4.3e-34 score:117.5 best_domain_score:117.5 name:DUF3526;
sp YES;
tm_num 6;
87685 87813 signal_peptide
ID metaerg.pl|04747
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
87685 89082 transmembrane_helix
ID metaerg.pl|04748
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology i87739-87807o88060-88128i88210-88278o88321-88389i88408-88467o88990-89058i;
89079 90488 CDS
ID metaerg.pl|04749
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA2999;g__12-FULL-67-14b;s__12-FULL-67-14b sp002737365;
genomedb_acc GCA_002737365.1;
genomedb_target db:genomedb|GCA_002737365.1|PHY08236.1 10 465 evalue:3.1e-66 qcov:97.20 identity:37.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF12040;
pfam_desc Domain of unknown function (DUF3526);
pfam_id DUF3526;
pfam_target db:Pfam-A.hmm|PF12040.8 evalue:4.5e-18 score:65.4 best_domain_score:64.5 name:DUF3526;
tm_num 5;
89079 90488 transmembrane_helix
ID metaerg.pl|04750
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology o89136-89195i89523-89591o89667-89735i89760-89828o89856-89924i;
90844 90587 CDS
ID metaerg.pl|04751
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
tm_num 2;
90844 90587 transmembrane_helix
ID metaerg.pl|04752
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology i90662-90730o90740-90808i;
91201 90848 CDS
ID metaerg.pl|04753
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
tm_num 3;
91201 90848 transmembrane_helix
ID metaerg.pl|04754
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology i90881-90949o91007-91075i91094-91162o;
91655 92980 CDS
ID metaerg.pl|04755
allgo_ids GO:0005829; GO:0016021; GO:0005886; GO:0009405;
genomedb_OC d__Bacteria;p__Desulfuromonadota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geoalkalibacteraceae;g__Geoalkalibacter;s__Geoalkalibacter ferrihydriticus;
genomedb_acc GCF_000820505.1;
genomedb_target db:genomedb|GCF_000820505.1|WP_040097866.1 1 440 evalue:3.8e-175 qcov:99.80 identity:73.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF10011;
pfam_desc Predicted membrane protein (DUF2254);
pfam_id DUF2254;
pfam_target db:Pfam-A.hmm|PF10011.9 evalue:4.6e-129 score:429.6 best_domain_score:429.4 name:DUF2254;
sprot_desc hypothetical protein;
sprot_id sp|P9WM35|Y1290_MYCTU;
sprot_target db:uniprot_sprot|sp|P9WM35|Y1290_MYCTU 60 422 evalue:1.3e-44 qcov:82.30 identity:33.60;
tm_num 4;
91655 92980 transmembrane_helix
ID metaerg.pl|04756
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology o91697-91765i91841-91909o91967-92035i92072-92140o;
93174 93761 CDS
ID metaerg.pl|04757
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosospira;s__Nitrosospira sp001899235;
genomedb_acc GCA_001899235.1;
genomedb_target db:genomedb|GCA_001899235.1|OJY09380.1 7 188 evalue:2.8e-53 qcov:93.30 identity:58.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00440;
pfam_desc Bacterial regulatory proteins, tetR family;
pfam_id TetR_N;
pfam_target db:Pfam-A.hmm|PF00440.23 evalue:5.1e-08 score:31.8 best_domain_score:30.5 name:TetR_N;
95167 93785 CDS
ID metaerg.pl|04758
allgo_ids GO:0030435;
allko_ids K06415;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Castellaniella;s__Castellaniella caeni;
genomedb_acc GCF_001592225.1;
genomedb_target db:genomedb|GCF_001592225.1|WP_066454572.1 13 457 evalue:4.8e-165 qcov:96.70 identity:64.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF04293;
pfam_desc SpoVR like protein;
pfam_id SpoVR;
pfam_target db:Pfam-A.hmm|PF04293.13 evalue:1.3e-93 score:313.2 best_domain_score:311.0 name:SpoVR;
sprot_desc Stage V sporulation protein R;
sprot_id sp|P37875|SP5R_BACSU;
sprot_target db:uniprot_sprot|sp|P37875|SP5R_BACSU 22 448 evalue:4.2e-67 qcov:92.80 identity:34.60;
96360 95167 CDS
ID metaerg.pl|04759
allko_ids K09786;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalorhabdales;f__Thiohalorhabdaceae;g__Thiohalorhabdus;s__Thiohalorhabdus denitrificans;
genomedb_acc GCF_001399755.1;
genomedb_target db:genomedb|GCF_001399755.1|WP_054964844.1 13 386 evalue:5.1e-139 qcov:94.20 identity:65.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF04285;
pfam_desc Protein of unknown function (DUF444);
pfam_id DUF444;
pfam_target db:Pfam-A.hmm|PF04285.12 evalue:3.7e-85 score:285.8 best_domain_score:190.3 name:DUF444;
sprot_desc hypothetical protein;
sprot_id sp|B8I6I0|Y490_CLOCE;
sprot_target db:uniprot_sprot|sp|B8I6I0|Y490_CLOCE 19 396 evalue:3.1e-50 qcov:95.20 identity:31.40;
98318 96366 CDS
ID metaerg.pl|04760
allgo_ids GO:0004672;
allko_ids K07180;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalorhabdales;f__Thiohalorhabdaceae;g__Thiohalorhabdus;s__Thiohalorhabdus denitrificans;
genomedb_acc GCF_001399755.1;
genomedb_target db:genomedb|GCF_001399755.1|WP_054964751.1 8 650 evalue:7.5e-289 qcov:98.90 identity:77.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF08298; PF06798;
pfam_desc PrkA AAA domain; PrkA serine protein kinase C-terminal domain;
pfam_id AAA_PrkA; PrkA;
pfam_target db:Pfam-A.hmm|PF08298.11 evalue:1.8e-101 score:338.8 best_domain_score:338.4 name:AAA_PrkA; db:Pfam-A.hmm|PF06798.12 evalue:3.4e-60 score:203.0 best_domain_score:202.5 name:PrkA;
sprot_desc hypothetical protein;
sprot_id sp|P39134|PRKA_BACSU;
sprot_target db:uniprot_sprot|sp|P39134|PRKA_BACSU 18 647 evalue:1.4e-145 qcov:96.90 identity:42.30;
98692 100812 CDS
ID metaerg.pl|04761
allgo_ids GO:0005525;
genomedb_OC d__Bacteria;p__Planctomycetota;c__UBA1135;o__UBA1135;f__GCA-002686595;g__GCA-2862085;s__GCA-2862085 sp002862085;
genomedb_acc GCA_002862085.1;
genomedb_target db:genomedb|GCA_002862085.1|PKCK01000047.1_14 17 696 evalue:2.6e-149 qcov:96.30 identity:44.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00350; PF01926;
pfam_desc Dynamin family; 50S ribosome-binding GTPase;
pfam_id Dynamin_N; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00350.23 evalue:5.2e-09 score:35.6 best_domain_score:34.6 name:Dynamin_N; db:Pfam-A.hmm|PF01926.23 evalue:2.1e-07 score:30.3 best_domain_score:27.6 name:MMR_HSR1;
100900 101445 CDS
ID metaerg.pl|04762
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000075.1_6 4 171 evalue:6.3e-52 qcov:92.80 identity:57.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00583; PF13302;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_3;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:5.1e-11 score:42.1 best_domain_score:41.6 name:Acetyltransf_1; db:Pfam-A.hmm|PF13302.7 evalue:8.1e-30 score:103.5 best_domain_score:103.2 name:Acetyltransf_3;
101445 101741 CDS
ID metaerg.pl|04763
allec_ids 3.6.1.7;
allgo_ids GO:0003998;
allko_ids K01512;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Ga0077555;s__Ga0077555 sp001464655;
genomedb_acc GCA_001464655.1;
genomedb_target db:genomedb|GCA_001464655.1|LNFG01000119.1_1 9 97 evalue:1.6e-17 qcov:90.80 identity:58.20;
kegg_pathway_id 00632; 00010; 00620;
kegg_pathway_name Benzoate degradation via CoA ligation; Glycolysis / Gluconeogenesis; Pyruvate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00708;
pfam_desc Acylphosphatase;
pfam_id Acylphosphatase;
pfam_target db:Pfam-A.hmm|PF00708.18 evalue:7.3e-25 score:86.4 best_domain_score:86.3 name:Acylphosphatase;
sprot_desc Acylphosphatase;
sprot_id sp|Q60AX4|ACYP_METCA;
sprot_target db:uniprot_sprot|sp|Q60AX4|ACYP_METCA 10 96 evalue:1.6e-16 qcov:88.80 identity:52.90;
101738 102022 CDS
ID metaerg.pl|04764
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Marinospirillum;s__Marinospirillum insulare;
genomedb_acc GCF_000686905.1;
genomedb_target db:genomedb|GCF_000686905.1|WP_027849926.1 5 94 evalue:9.7e-12 qcov:95.70 identity:47.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF04456;
pfam_desc Protein of unknown function (DUF503);
pfam_id DUF503;
pfam_target db:Pfam-A.hmm|PF04456.12 evalue:6.4e-14 score:50.8 best_domain_score:50.7 name:DUF503;
101985 103073 CDS
ID metaerg.pl|04765
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Marinobacter;s__Marinobacter shengliensis;
genomedb_acc GCF_003007715.1;
genomedb_target db:genomedb|GCF_003007715.1|WP_106693677.1 9 355 evalue:2.2e-43 qcov:95.90 identity:35.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF11279;
pfam_desc Protein of unknown function (DUF3080);
pfam_id DUF3080;
pfam_target db:Pfam-A.hmm|PF11279.8 evalue:3.8e-69 score:232.6 best_domain_score:232.4 name:DUF3080;
sp YES;
101985 102062 lipoprotein_signal_peptide
ID metaerg.pl|04766
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
103088 103489 CDS
ID metaerg.pl|04767
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000076.1_71 1 128 evalue:2.0e-18 qcov:96.20 identity:45.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
sp YES;
tm_num 1;
103088 103174 signal_peptide
ID metaerg.pl|04768
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
103088 103489 transmembrane_helix
ID metaerg.pl|04769
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology o103097-103150i;
104888 103464 CDS
ID metaerg.pl|04770
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0005298; GO:0031402; GO:0015824;
allko_ids K11928;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Anaerobacillaceae_A;g__Anaerobacillus_A;s__Anaerobacillus_A sp002563635;
genomedb_acc GCF_002563635.1;
genomedb_target db:genomedb|GCF_002563635.1|WP_098446144.1 1 464 evalue:6.1e-131 qcov:97.90 identity:53.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF00474;
pfam_desc Sodium:solute symporter family;
pfam_id SSF;
pfam_target db:Pfam-A.hmm|PF00474.17 evalue:1.2e-93 score:313.5 best_domain_score:312.8 name:SSF;
sprot_desc Sodium/proline symporter;
sprot_id sp|P10502|PUTP_SALTY;
sprot_target db:uniprot_sprot|sp|P10502|PUTP_SALTY 1 466 evalue:1.5e-120 qcov:98.30 identity:51.50;
tigrfam_acc TIGR00813; TIGR02121;
tigrfam_desc transporter, solute:sodium symporter (SSS) family; sodium/proline symporter;
tigrfam_mainrole Transport and binding proteins; Transport and binding proteins;
tigrfam_name sss; Na_Pro_sym;
tigrfam_sub1role Cations and iron carrying compounds; Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00813 evalue:2.2e-82 score:276.5 best_domain_score:276.1 name:TIGR00813; db:TIGRFAMs.hmm|TIGR02121 evalue:1.1e-175 score:584.2 best_domain_score:583.9 name:TIGR02121;
tm_num 12;
104888 103464 transmembrane_helix
ID metaerg.pl|04771
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
topology i103476-103535o103653-103721i103842-103910o103953-104021i104034-104102o104139-104207i104268-104336o104379-104447i104544-104603o104631-104690i104703-104762o104790-104858i;
105077 105568 CDS
ID metaerg.pl|04772
allec_ids 1.11.1.9;
allgo_ids GO:0004602; GO:0006979; GO:0055114;
allko_ids K00432;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter;s__Achromobacter sp001270295;
genomedb_acc GCF_001270295.1;
genomedb_target db:genomedb|GCF_001270295.1|WP_053246124.1 7 162 evalue:5.5e-55 qcov:95.70 identity:63.50;
kegg_pathway_id 00590; 00480;
kegg_pathway_name Arachidonic acid metabolism; Glutathione metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
metacyc_pathway_id PWY-4081;
metacyc_pathway_name glutathione-peroxide redox reactions;;
metacyc_pathway_type Reductants;;
pfam_acc PF00255;
pfam_desc Glutathione peroxidase;
pfam_id GSHPx;
pfam_target db:Pfam-A.hmm|PF00255.19 evalue:9.8e-41 score:137.0 best_domain_score:136.6 name:GSHPx;
sprot_desc Glutathione peroxidase;
sprot_id sp|O32770|GPO_LACLM;
sprot_target db:uniprot_sprot|sp|O32770|GPO_LACLM 7 161 evalue:1.1e-46 qcov:95.10 identity:53.50;
105572 106477 CDS
ID metaerg.pl|04773
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000076.1_68 10 291 evalue:3.9e-91 qcov:93.70 identity:62.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF05673;
pfam_desc Protein of unknown function (DUF815);
pfam_id DUF815;
pfam_target db:Pfam-A.hmm|PF05673.13 evalue:6.5e-96 score:319.5 best_domain_score:319.3 name:DUF815;
106575 107585 CDS
ID metaerg.pl|04774
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA4421;s__UBA4421 sp002390555;
genomedb_acc GCA_002390555.1;
genomedb_target db:genomedb|GCA_002390555.1|DGPT01000129.1_25 8 333 evalue:7.3e-54 qcov:97.00 identity:36.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
pfam_acc PF04338;
pfam_desc Protein of unknown function, DUF481;
pfam_id DUF481;
pfam_target db:Pfam-A.hmm|PF04338.12 evalue:2.9e-44 score:150.9 best_domain_score:150.5 name:DUF481;
sp YES;
106575 106634 signal_peptide
ID metaerg.pl|04775
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
107674 107749 tRNA
ID metaerg.pl|04776
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.103959; 0.226011; 13.2302; 0.0136284; 13.5738;
name tRNA_Glu_ttc;
>Feature NODE_28_length_107589_cov_8.31387
71 340 CDS
ID metaerg.pl|04777
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__PALSA-1209;s__PALSA-1209 sp003132025;
genomedb_acc GCA_003132025.1;
genomedb_target db:genomedb|GCA_003132025.1|PKWJ01000026.1_29 1 70 evalue:1.5e-14 qcov:78.70 identity:54.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
885 337 CDS
ID metaerg.pl|04778
allec_ids 1.-.-.-;
allgo_ids GO:0016021; GO:0048037; GO:0016491;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Taibaiella_B;s__Taibaiella_B sp002423665;
genomedb_acc GCA_002423665.1;
genomedb_target db:genomedb|GCA_002423665.1|DINJ01000064.1_2 1 177 evalue:6.6e-57 qcov:97.30 identity:56.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
metacyc_pathway_id PWY-4302; PWY-5271; PWY-5826; PWY-2821; PWY-5469; PWY-5987; PWY-5479; PWY-6113; PWYG-321;
metacyc_pathway_name aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF01243;
pfam_desc Pyridoxamine 5'-phosphate oxidase;
pfam_id Putative_PNPOx;
pfam_target db:Pfam-A.hmm|PF01243.20 evalue:5.2e-09 score:35.4 best_domain_score:34.3 name:Putative_PNPOx;
sprot_desc Pyridoxamine 5'-phosphate oxidase family protein ustO;
sprot_id sp|B8NM62|USTO_ASPFN;
sprot_target db:uniprot_sprot|sp|B8NM62|USTO_ASPFN 8 177 evalue:8.2e-30 qcov:93.40 identity:41.20;
2380 890 CDS
ID metaerg.pl|04779
allec_ids 2.4.1.21;
allgo_ids GO:0033201; GO:0004373; GO:0009011; GO:0005978;
allko_ids K00749; K13677; K00712; K03844; K00703;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106922261.1 1 470 evalue:1.5e-260 qcov:94.80 identity:88.90;
kegg_pathway_id 00500; 01030; 00510;
kegg_pathway_name Starch and sucrose metabolism; Glycan structures - biosynthesis 1; N-Glycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
metacyc_pathway_id GLYCOGENSYNTH-PWY; PWY-622;
metacyc_pathway_name glycogen biosynthesis I (from ADP-D-Glucose);; starch biosynthesis;;
metacyc_pathway_type GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;;
pfam_acc PF00534; PF13439; PF08323; PF13692; PF13579;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Starch synthase catalytic domain; Glycosyl transferases group 1; Glycosyl transferase 4-like domain;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_transf_5; Glyco_trans_1_4; Glyco_trans_4_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:3e-15 score:55.4 best_domain_score:54.7 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:9.7e-15 score:54.2 best_domain_score:50.5 name:Glyco_transf_4; db:Pfam-A.hmm|PF08323.11 evalue:6e-66 score:221.8 best_domain_score:221.3 name:Glyco_transf_5; db:Pfam-A.hmm|PF13692.6 evalue:5.3e-10 score:39.1 best_domain_score:38.1 name:Glyco_trans_1_4; db:Pfam-A.hmm|PF13579.6 evalue:1.9e-14 score:53.7 best_domain_score:47.4 name:Glyco_trans_4_4;
sprot_desc Glycogen synthase;
sprot_id sp|Q8DKU2|GLGA_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DKU2|GLGA_THEEB 1 468 evalue:9.7e-235 qcov:94.40 identity:78.60;
tigrfam_acc TIGR02095;
tigrfam_desc glycogen/starch synthase, ADP-glucose type;
tigrfam_mainrole Energy metabolism;
tigrfam_name glgA;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02095 evalue:8.4e-159 score:528.4 best_domain_score:528.2 name:TIGR02095;
3569 2502 CDS
ID metaerg.pl|04780
allgo_ids GO:0019239;
allko_ids K01488;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073607000.1 1 341 evalue:1.2e-176 qcov:96.10 identity:88.60;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00962;
pfam_desc Adenosine/AMP deaminase;
pfam_id A_deaminase;
pfam_target db:Pfam-A.hmm|PF00962.22 evalue:3.4e-20 score:71.8 best_domain_score:71.5 name:A_deaminase;
4040 5359 CDS
ID metaerg.pl|04781
allec_ids 6.3.4.4;
allgo_ids GO:0004019; GO:0005525; GO:0006164; GO:0005737; GO:0000287; GO:0044208;
allko_ids K01939;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106867050.1 1 439 evalue:1.2e-245 qcov:100.00 identity:93.60;
kegg_pathway_id 00230; 00252;
kegg_pathway_name Purine metabolism; Alanine and aspartate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
metacyc_pathway_id DENOVOPURINE2-PWY; P121-PWY; PWY-841; PRPP-PWY; PWY-6126;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; adenine and adenosine salvage I;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Adenine-Adenosine-Salvage;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00709;
pfam_desc Adenylosuccinate synthetase;
pfam_id Adenylsucc_synt;
pfam_target db:Pfam-A.hmm|PF00709.21 evalue:2.2e-179 score:596.0 best_domain_score:595.8 name:Adenylsucc_synt;
sprot_desc Adenylosuccinate synthetase;
sprot_id sp|Q31KI0|PURA_SYNE7;
sprot_target db:uniprot_sprot|sp|Q31KI0|PURA_SYNE7 1 439 evalue:3.0e-211 qcov:100.00 identity:79.50;
tigrfam_acc TIGR00184;
tigrfam_desc adenylosuccinate synthase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purA;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00184 evalue:2.9e-164 score:546.1 best_domain_score:545.9 name:TIGR00184;
5423 6049 CDS
ID metaerg.pl|04782
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0008097;
allko_ids K02897;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106867051.1 1 195 evalue:2.8e-80 qcov:93.80 identity:79.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF01386; PF14693;
pfam_desc Ribosomal L25p family; Ribosomal protein TL5, C-terminal domain;
pfam_id Ribosomal_L25p; Ribosomal_TL5_C;
pfam_target db:Pfam-A.hmm|PF01386.19 evalue:2e-19 score:69.1 best_domain_score:68.0 name:Ribosomal_L25p; db:Pfam-A.hmm|PF14693.6 evalue:2.2e-25 score:88.1 best_domain_score:87.2 name:Ribosomal_TL5_C;
sprot_desc 50S ribosomal protein L25;
sprot_id sp|B7KCY0|RL25_CYAP7;
sprot_target db:uniprot_sprot|sp|B7KCY0|RL25_CYAP7 1 192 evalue:3.5e-53 qcov:92.30 identity:52.60;
tigrfam_acc TIGR00731;
tigrfam_desc ribosomal protein bL25, Ctc-form;
tigrfam_mainrole Protein synthesis;
tigrfam_name bL25_bact_ctc;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00731 evalue:1.2e-37 score:128.5 best_domain_score:128.3 name:TIGR00731;
6339 7874 CDS
ID metaerg.pl|04783
allgo_ids GO:0005524; GO:0016301;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106867052.1 1 509 evalue:2.0e-228 qcov:99.60 identity:77.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF13671; PF06414;
pfam_desc AAA domain; Zeta toxin;
pfam_id AAA_33; Zeta_toxin;
pfam_target db:Pfam-A.hmm|PF13671.6 evalue:3.4e-21 score:75.1 best_domain_score:73.9 name:AAA_33; db:Pfam-A.hmm|PF06414.12 evalue:2.6e-05 score:22.8 best_domain_score:22.0 name:Zeta_toxin;
7906 8199 CDS
ID metaerg.pl|04784
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO40990.1 1 97 evalue:1.8e-21 qcov:100.00 identity:60.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
tm_num 1;
7906 8199 transmembrane_helix
ID metaerg.pl|04785
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology i7939-8007o;
8301 9428 CDS
ID metaerg.pl|04786
allgo_ids GO:0009294;
allko_ids K04096;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106867054.1 4 373 evalue:7.2e-151 qcov:98.70 identity:72.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF02481; PF17782;
pfam_desc DNA recombination-mediator protein A; DprA winged helix domain;
pfam_id DNA_processg_A; DprA_WH;
pfam_target db:Pfam-A.hmm|PF02481.15 evalue:1.1e-77 score:259.3 best_domain_score:258.8 name:DNA_processg_A; db:Pfam-A.hmm|PF17782.1 evalue:1.5e-15 score:56.3 best_domain_score:55.3 name:DprA_WH;
sprot_desc hypothetical protein;
sprot_id sp|P73345|SMF_SYNY3;
sprot_target db:uniprot_sprot|sp|P73345|SMF_SYNY3 2 373 evalue:5.7e-94 qcov:99.20 identity:46.80;
tigrfam_acc TIGR00732;
tigrfam_desc DNA protecting protein DprA;
tigrfam_mainrole Cellular processes;
tigrfam_name dprA;
tigrfam_sub1role DNA transformation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00732 evalue:9.4e-80 score:266.1 best_domain_score:265.7 name:TIGR00732;
10104 9538 CDS
ID metaerg.pl|04787
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_081972755.1 1 182 evalue:3.5e-53 qcov:96.80 identity:58.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00498;
pfam_desc FHA domain;
pfam_id FHA;
pfam_target db:Pfam-A.hmm|PF00498.26 evalue:3.5e-14 score:52.2 best_domain_score:51.4 name:FHA;
11089 10454 CDS
ID metaerg.pl|04788
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106867058.1 1 193 evalue:8.1e-59 qcov:91.50 identity:57.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF08819;
pfam_desc Domain of unknown function (DUF1802);
pfam_id DUF1802;
pfam_target db:Pfam-A.hmm|PF08819.11 evalue:6.6e-54 score:181.6 best_domain_score:181.4 name:DUF1802;
11922 11146 CDS
ID metaerg.pl|04789
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO39735.1 1 251 evalue:7.1e-73 qcov:97.30 identity:58.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF13419; PF00702;
pfam_desc Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase;
pfam_id HAD_2; Hydrolase;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:6.8e-18 score:64.6 best_domain_score:53.0 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:3e-12 score:46.5 best_domain_score:43.9 name:Hydrolase;
tigrfam_acc TIGR01549;
tigrfam_desc HAD hydrolase, family IA, variant 1;
tigrfam_mainrole Unknown function;
tigrfam_name HAD-SF-IA-v1;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01549 evalue:4.8e-07 score:29.5 best_domain_score:18.5 name:TIGR01549;
13016 12051 CDS
ID metaerg.pl|04790
allgo_ids GO:0003676; GO:0005840; GO:0003723;
allko_ids K12818; K03022; K03049; K00962; K02945;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017300179.1 1 321 evalue:1.7e-164 qcov:100.00 identity:92.90;
kegg_pathway_id 00240; 03010; 03020; 00230;
kegg_pathway_name Pyrimidine metabolism; Ribosome; RNA polymerase; Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00575;
pfam_desc S1 RNA binding domain;
pfam_id S1;
pfam_target db:Pfam-A.hmm|PF00575.23 evalue:6.4e-48 score:160.2 best_domain_score:73.2 name:S1;
sprot_desc 30S ribosomal protein S1;
sprot_id sp|P46228|RS1_SYNP6;
sprot_target db:uniprot_sprot|sp|P46228|RS1_SYNP6 1 300 evalue:6.9e-149 qcov:93.50 identity:87.70;
13820 13296 CDS
ID metaerg.pl|04791
allgo_ids GO:0005524; GO:0003677; GO:0008270; GO:0045892;
allko_ids K07738;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106868185.1 1 170 evalue:2.3e-67 qcov:97.70 identity:80.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF03477;
pfam_desc ATP cone domain;
pfam_id ATP-cone;
pfam_target db:Pfam-A.hmm|PF03477.16 evalue:5e-17 score:61.5 best_domain_score:60.9 name:ATP-cone;
sprot_desc Transcriptional repressor NrdR;
sprot_id sp|B0BZ87|NRDR_ACAM1;
sprot_target db:uniprot_sprot|sp|B0BZ87|NRDR_ACAM1 1 153 evalue:4.8e-56 qcov:87.90 identity:69.30;
tigrfam_acc TIGR00244;
tigrfam_desc transcriptional regulator NrdR;
tigrfam_mainrole Regulatory functions;
tigrfam_name TIGR00244;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00244 evalue:7.2e-62 score:207.0 best_domain_score:206.8 name:TIGR00244;
15769 14237 CDS
ID metaerg.pl|04792
allgo_ids GO:0009521; GO:0009767; GO:0016020; GO:0016168; GO:0019684; GO:0016021; GO:0009523; GO:0042651; GO:0045156; GO:0009772; GO:0018298;
allko_ids K02704;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106903116.1 1 510 evalue:1.7e-291 qcov:100.00 identity:92.70;
kegg_pathway_id 00195;
kegg_pathway_name Photosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00421;
pfam_desc Photosystem II protein;
pfam_id PSII;
pfam_target db:Pfam-A.hmm|PF00421.19 evalue:5.6e-259 score:859.2 best_domain_score:859.0 name:PSII;
sprot_desc Photosystem II CP47 reaction center protein;
sprot_id sp|Q8DIQ1|PSBB_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DIQ1|PSBB_THEEB 1 510 evalue:1.7e-266 qcov:100.00 identity:82.90;
tigrfam_acc TIGR03039;
tigrfam_desc photosystem II chlorophyll-binding protein CP47;
tigrfam_mainrole Energy metabolism;
tigrfam_name PS_II_CP47;
tigrfam_sub1role Photosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR03039 evalue:0 score:1027.5 best_domain_score:1027.3 name:TIGR03039;
tm_num 6;
15769 14237 transmembrane_helix
ID metaerg.pl|04793
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology i14294-14362o14522-14590i14651-14719o14828-14887i14945-15013o15581-15649i;
16122 16460 CDS
ID metaerg.pl|04794
allgo_ids GO:0009055; GO:0051536;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106872921.1 1 112 evalue:7.9e-45 qcov:100.00 identity:75.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00111;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain;
pfam_id Fer2;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:7.1e-10 score:38.0 best_domain_score:37.4 name:Fer2;
17028 17288 CDS
ID metaerg.pl|04795
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
tm_num 1;
17028 17288 transmembrane_helix
ID metaerg.pl|04796
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology o17070-17138i;
17334 18155 CDS
ID metaerg.pl|04797
allgo_ids GO:0004298; GO:0005839; GO:0051603;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035985903.1 16 270 evalue:6.5e-125 qcov:93.40 identity:83.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00227;
pfam_desc Proteasome subunit;
pfam_id Proteasome;
pfam_target db:Pfam-A.hmm|PF00227.26 evalue:1.9e-08 score:33.2 best_domain_score:32.6 name:Proteasome;
18975 18121 CDS
ID metaerg.pl|04798
allgo_ids GO:0000287; GO:0008897;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106872917.1 13 246 evalue:9.0e-45 qcov:82.40 identity:45.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF01648;
pfam_desc 4'-phosphopantetheinyl transferase superfamily;
pfam_id ACPS;
pfam_target db:Pfam-A.hmm|PF01648.20 evalue:9.7e-14 score:50.7 best_domain_score:47.9 name:ACPS;
19412 20665 CDS
ID metaerg.pl|04799
allec_ids 1.6.5.12;
allgo_ids GO:0016491; GO:0055114; GO:0003955; GO:0019646; GO:0042372;
allko_ids K01008; K03885; K00356; K17872;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO37796.1 24 410 evalue:3.2e-139 qcov:92.80 identity:65.40;
kegg_pathway_id 00450; 00190;
kegg_pathway_name Selenoamino acid metabolism; Oxidative phosphorylation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF01266; PF13450; PF13454; PF00070; PF07992;
pfam_desc FAD dependent oxidoreductase; NAD(P)-binding Rossmann-like domain; FAD-NAD(P)-binding; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id DAO; NAD_binding_8; NAD_binding_9; Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:3.6e-09 score:35.9 best_domain_score:14.3 name:DAO; db:Pfam-A.hmm|PF13450.6 evalue:5e-08 score:32.3 best_domain_score:19.2 name:NAD_binding_8; db:Pfam-A.hmm|PF13454.6 evalue:1.2e-09 score:37.6 best_domain_score:16.0 name:NAD_binding_9; db:Pfam-A.hmm|PF00070.27 evalue:8.2e-18 score:64.0 best_domain_score:45.5 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:2.1e-44 score:151.2 best_domain_score:150.9 name:Pyr_redox_2;
sprot_desc Demethylphylloquinone reductase NdbB;
sprot_id sp|P73735|NDBB_SYNY3;
sprot_target db:uniprot_sprot|sp|P73735|NDBB_SYNY3 24 411 evalue:3.1e-69 qcov:93.00 identity:40.80;
20762 22621 CDS
ID metaerg.pl|04800
allgo_ids GO:0005524; GO:0016787;
allko_ids K02341; K01509; K07767; K13254; K02343; K02340; K00733; K13525;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073608671.1 1 616 evalue:5.5e-297 qcov:99.50 identity:84.10;
kegg_pathway_id 00230; 01030; 03030;
kegg_pathway_name Purine metabolism; Glycan structures - biosynthesis 1; DNA replication;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00004; PF13173; PF13191; PF13238; PF07724; PF13401; PF13521; PF07726; PF13671; PF07728; PF12775; PF17862; PF01695; PF01078; PF02562; PF04851; PF00910; PF05496; PF00158; PF06068;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain; AAA ATPase domain; AAA domain; AAA domain (Cdc48 subfamily); AAA domain; AAA domain; ATPase family associated with various cellular activities (AAA); AAA domain; AAA domain (dynein-related subfamily); P-loop containing dynein motor region; AAA+ lid domain; IstB-like ATP binding protein; Magnesium chelatase, subunit ChlI; PhoH-like protein; Type III restriction enzyme, res subunit; RNA helicase; Holliday junction DNA helicase RuvB P-loop domain; Sigma-54 interaction domain; TIP49 P-loop domain;
pfam_id AAA; AAA_14; AAA_16; AAA_18; AAA_2; AAA_22; AAA_28; AAA_3; AAA_33; AAA_5; AAA_7; AAA_lid_3; IstB_IS21; Mg_chelatase; PhoH; ResIII; RNA_helicase; RuvB_N; Sigma54_activat; TIP49;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1.9e-89 score:296.1 best_domain_score:148.4 name:AAA; db:Pfam-A.hmm|PF13173.6 evalue:2.1e-07 score:30.2 best_domain_score:14.0 name:AAA_14; db:Pfam-A.hmm|PF13191.6 evalue:3e-15 score:56.2 best_domain_score:24.0 name:AAA_16; db:Pfam-A.hmm|PF13238.6 evalue:3.6e-07 score:30.0 best_domain_score:16.8 name:AAA_18; db:Pfam-A.hmm|PF07724.14 evalue:3.9e-09 score:36.1 best_domain_score:19.1 name:AAA_2; db:Pfam-A.hmm|PF13401.6 evalue:1.9e-13 score:50.1 best_domain_score:18.1 name:AAA_22; db:Pfam-A.hmm|PF13521.6 evalue:1.3e-08 score:34.5 best_domain_score:20.1 name:AAA_28; db:Pfam-A.hmm|PF07726.11 evalue:5.2e-05 score:22.4 best_domain_score:10.8 name:AAA_3; db:Pfam-A.hmm|PF13671.6 evalue:2.3e-10 score:40.0 best_domain_score:22.1 name:AAA_33; db:Pfam-A.hmm|PF07728.14 evalue:2.4e-13 score:49.5 best_domain_score:23.6 name:AAA_5; db:Pfam-A.hmm|PF12775.7 evalue:3.9e-07 score:29.0 best_domain_score:15.5 name:AAA_7; db:Pfam-A.hmm|PF17862.1 evalue:2.4e-18 score:64.9 best_domain_score:34.7 name:AAA_lid_3; db:Pfam-A.hmm|PF01695.17 evalue:8.7e-08 score:31.3 best_domain_score:17.7 name:IstB_IS21; db:Pfam-A.hmm|PF01078.21 evalue:8e-07 score:27.9 best_domain_score:14.1 name:Mg_chelatase; db:Pfam-A.hmm|PF02562.16 evalue:0.00011 score:20.9 best_domain_score:11.5 name:PhoH; db:Pfam-A.hmm|PF04851.15 evalue:1.5e-05 score:24.3 best_domain_score:14.4 name:ResIII; db:Pfam-A.hmm|PF00910.22 evalue:5.5e-06 score:26.0 best_domain_score:11.8 name:RNA_helicase; db:Pfam-A.hmm|PF05496.12 evalue:3.7e-13 score:48.7 best_domain_score:23.6 name:RuvB_N; db:Pfam-A.hmm|PF00158.26 evalue:4e-07 score:29.1 best_domain_score:16.0 name:Sigma54_activat; db:Pfam-A.hmm|PF06068.13 evalue:8.5e-09 score:34.3 best_domain_score:16.4 name:TIP49;
sprot_desc Cell division cycle protein 48 homolog AF_1297;
sprot_id sp|O28972|Y1297_ARCFU;
sprot_target db:uniprot_sprot|sp|O28972|Y1297_ARCFU 96 602 evalue:2.0e-152 qcov:81.90 identity:52.90;
tigrfam_acc TIGR01242;
tigrfam_desc 26S proteasome subunit P45 family;
tigrfam_name 26Sp45;
tigrfam_target db:TIGRFAMs.hmm|TIGR01242 evalue:1.4e-138 score:461.2 best_domain_score:240.6 name:TIGR01242;
24162 22762 CDS
ID metaerg.pl|04801
allgo_ids GO:0016811;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__PCC-6406;s__PCC-6406 sp000332095;
genomedb_acc GCF_000332095.2;
genomedb_target db:genomedb|GCF_000332095.2|WP_008314862.1 1 464 evalue:1.3e-226 qcov:99.60 identity:78.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF03069;
pfam_desc Acetamidase/Formamidase family;
pfam_id FmdA_AmdA;
pfam_target db:Pfam-A.hmm|PF03069.15 evalue:6.4e-31 score:106.8 best_domain_score:63.7 name:FmdA_AmdA;
sp YES;
tm_num 1;
22762 22869 signal_peptide
ID metaerg.pl|04802
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
24162 22762 transmembrane_helix
ID metaerg.pl|04803
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology i22798-22866o;
25548 24427 CDS
ID metaerg.pl|04804
allec_ids 2.1.1.192;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0070040; GO:0019843; GO:0002935; GO:0000049; GO:0070475;
allko_ids K06941;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035989184.1 28 358 evalue:1.1e-159 qcov:88.70 identity:85.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF04055;
pfam_desc Radical SAM superfamily;
pfam_id Radical_SAM;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:4e-15 score:55.8 best_domain_score:55.2 name:Radical_SAM;
sprot_desc Probable dual-specificity RNA methyltransferase RlmN;
sprot_id sp|Q3M9B9|RLMN_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M9B9|RLMN_ANAVT 1 356 evalue:1.4e-140 qcov:95.40 identity:69.10;
tigrfam_acc TIGR00048;
tigrfam_desc 23S rRNA (adenine(2503)-C(2))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name rRNA_mod_RlmN;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00048 evalue:6.2e-139 score:462.0 best_domain_score:461.6 name:TIGR00048;
26528 25638 CDS
ID metaerg.pl|04805
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073608733.1 3 295 evalue:3.4e-111 qcov:99.00 identity:77.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF01145;
pfam_desc SPFH domain / Band 7 family;
pfam_id Band_7;
pfam_target db:Pfam-A.hmm|PF01145.25 evalue:1.1e-35 score:122.4 best_domain_score:122.2 name:Band_7;
sprot_desc hypothetical protein;
sprot_id sp|P72655|Y1128_SYNY3;
sprot_target db:uniprot_sprot|sp|P72655|Y1128_SYNY3 11 263 evalue:4.8e-48 qcov:85.50 identity:37.60;
27535 26630 CDS
ID metaerg.pl|04806
allgo_ids GO:0003877;
allko_ids K00988;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106923328.1 1 300 evalue:4.6e-108 qcov:99.70 identity:67.20;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF09830;
pfam_desc ATP adenylyltransferase;
pfam_id ATP_transf;
pfam_target db:Pfam-A.hmm|PF09830.9 evalue:8.9e-21 score:73.1 best_domain_score:71.6 name:ATP_transf;
30458 28284 CDS
ID metaerg.pl|04807
allec_ids 2.7.4.1;
allgo_ids GO:0009358; GO:0005524; GO:0046872; GO:0008976; GO:0006799;
allko_ids K00937;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035993032.1 16 713 evalue:1.9e-310 qcov:96.40 identity:77.50;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF13091; PF02503; PF13090; PF17941; PF13089;
pfam_desc PLD-like domain; Polyphosphate kinase middle domain; Polyphosphate kinase C-terminal domain 2; Polyphosphate kinase C-terminal domain 1; Polyphosphate kinase N-terminal domain;
pfam_id PLDc_2; PP_kinase; PP_kinase_C; PP_kinase_C_1; PP_kinase_N;
pfam_target db:Pfam-A.hmm|PF13091.6 evalue:2.3e-14 score:52.6 best_domain_score:25.9 name:PLDc_2; db:Pfam-A.hmm|PF02503.17 evalue:3.4e-72 score:241.5 best_domain_score:240.6 name:PP_kinase; db:Pfam-A.hmm|PF13090.6 evalue:1.4e-71 score:238.7 best_domain_score:235.8 name:PP_kinase_C; db:Pfam-A.hmm|PF17941.1 evalue:2.5e-77 score:257.4 best_domain_score:256.8 name:PP_kinase_C_1; db:Pfam-A.hmm|PF13089.6 evalue:1.3e-38 score:130.9 best_domain_score:129.7 name:PP_kinase_N;
sprot_desc Polyphosphate kinase;
sprot_id sp|Q8DMA8|PPK1_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DMA8|PPK1_THEEB 16 721 evalue:1.2e-254 qcov:97.50 identity:61.70;
tigrfam_acc TIGR03705;
tigrfam_desc polyphosphate kinase 1;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name poly_P_kin;
tigrfam_sub1role Phosphorus compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR03705 evalue:1.4e-262 score:872.2 best_domain_score:872.0 name:TIGR03705;
30783 30463 CDS
ID metaerg.pl|04808
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035993030.1 30 105 evalue:6.4e-20 qcov:71.70 identity:65.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
32556 30922 CDS
ID metaerg.pl|04809
allgo_ids GO:0030435;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017297666.1 19 544 evalue:7.8e-231 qcov:96.70 identity:81.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF05552;
pfam_desc Conserved TM helix;
pfam_id TM_helix;
pfam_target db:Pfam-A.hmm|PF05552.12 evalue:3.4e-46 score:154.2 best_domain_score:53.7 name:TM_helix;
sprot_desc hypothetical protein;
sprot_id sp|P37874|YGXB_BACSU;
sprot_target db:uniprot_sprot|sp|P37874|YGXB_BACSU 27 533 evalue:4.3e-50 qcov:93.20 identity:29.90;
tm_num 11;
32556 30922 transmembrane_helix
ID metaerg.pl|04810
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology o31039-31107i31204-31272o31330-31398i31498-31566o31609-31677i31756-31824o31882-31950i32125-32193o32236-32304i32341-32397o32425-32493i;
32937 33380 CDS
ID metaerg.pl|04811
allko_ids K00626;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO45358.1 1 145 evalue:3.9e-60 qcov:98.60 identity:73.10;
kegg_pathway_id 00310; 00280; 00632; 00380; 02020; 00620; 00072; 00640; 00650; 00071;
kegg_pathway_name Lysine degradation; Valine, leucine and isoleucine degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Two-component system - General; Pyruvate metabolism; Synthesis and degradation of ketone bodies; Propanoate metabolism; Butanoate metabolism; Fatty acid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF10604;
pfam_desc Polyketide cyclase / dehydrase and lipid transport;
pfam_id Polyketide_cyc2;
pfam_target db:Pfam-A.hmm|PF10604.9 evalue:1.2e-18 score:67.0 best_domain_score:66.8 name:Polyketide_cyc2;
33397 33603 CDS
ID metaerg.pl|04812
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
33994 33566 CDS
ID metaerg.pl|04813
allgo_ids GO:0003676;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO45359.1 1 142 evalue:1.3e-47 qcov:100.00 identity:71.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00076;
pfam_desc RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);
pfam_id RRM_1;
pfam_target db:Pfam-A.hmm|PF00076.22 evalue:5.2e-16 score:57.5 best_domain_score:56.9 name:RRM_1;
36970 34478 CDS
ID metaerg.pl|04814
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106868813.1 18 830 evalue:8.1e-179 qcov:98.00 identity:45.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
tm_num 7;
36970 34478 transmembrane_helix
ID metaerg.pl|04815
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology i35270-35338o35426-35494i35756-35824o35852-35920i36359-36427o36470-36523i36905-36964o;
37214 37954 CDS
ID metaerg.pl|04816
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO45361.1 1 246 evalue:3.4e-101 qcov:100.00 identity:76.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF01925;
pfam_desc Sulfite exporter TauE/SafE;
pfam_id TauE;
pfam_target db:Pfam-A.hmm|PF01925.19 evalue:1.8e-23 score:82.7 best_domain_score:82.4 name:TauE;
tm_num 7;
37214 37954 transmembrane_helix
ID metaerg.pl|04817
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology i37232-37300o37310-37378i37415-37483o37493-37552i37589-37657o37769-37837i37871-37924o;
39235 37937 CDS
ID metaerg.pl|04818
allec_ids 3.1.-.-;
allgo_ids GO:0016787; GO:0008408; GO:0045027; GO:0004519; GO:0042802; GO:0030145; GO:0000403; GO:0006302;
allko_ids K03547;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017297661.1 1 418 evalue:1.1e-182 qcov:96.80 identity:75.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:8.9e-17 score:61.5 best_domain_score:60.6 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:1.4e-13 score:50.6 best_domain_score:47.7 name:Metallophos_2;
sprot_desc DNA double-strand break repair protein Mre11;
sprot_id sp|Q8U1N9|MRE11_PYRFU;
sprot_target db:uniprot_sprot|sp|Q8U1N9|MRE11_PYRFU 3 339 evalue:6.9e-27 qcov:78.00 identity:28.90;
40460 39357 CDS
ID metaerg.pl|04819
allgo_ids GO:0006415; GO:0005737; GO:0016149;
allko_ids K02835;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106919541.1 1 366 evalue:2.3e-178 qcov:99.70 identity:88.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF03462; PF00472;
pfam_desc PCRF domain; RF-1 domain;
pfam_id PCRF; RF-1;
pfam_target db:Pfam-A.hmm|PF03462.18 evalue:5.9e-74 score:247.4 best_domain_score:247.4 name:PCRF; db:Pfam-A.hmm|PF00472.20 evalue:1.6e-38 score:130.5 best_domain_score:130.5 name:RF-1;
sprot_desc Peptide chain release factor 1;
sprot_id sp|B1XJH8|RF1_SYNP2;
sprot_target db:uniprot_sprot|sp|B1XJH8|RF1_SYNP2 1 363 evalue:1.4e-166 qcov:98.90 identity:80.70;
tigrfam_acc TIGR00019;
tigrfam_desc peptide chain release factor 1;
tigrfam_mainrole Protein synthesis;
tigrfam_name prfA;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00019 evalue:1.1e-159 score:530.3 best_domain_score:530.1 name:TIGR00019;
40784 40539 CDS
ID metaerg.pl|04820
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02909;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035991946.1 1 81 evalue:4.8e-36 qcov:100.00 identity:91.40;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF01197;
pfam_desc Ribosomal protein L31;
pfam_id Ribosomal_L31;
pfam_target db:Pfam-A.hmm|PF01197.18 evalue:1.6e-24 score:85.1 best_domain_score:84.9 name:Ribosomal_L31;
sprot_desc 50S ribosomal protein L31;
sprot_id sp|Q3MF92|RL31_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MF92|RL31_ANAVT 1 68 evalue:2.1e-33 qcov:84.00 identity:89.70;
tigrfam_acc TIGR00105;
tigrfam_desc ribosomal protein bL31;
tigrfam_mainrole Protein synthesis;
tigrfam_name L31;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00105 evalue:1.2e-24 score:85.3 best_domain_score:85.1 name:TIGR00105;
41321 40908 CDS
ID metaerg.pl|04821
allgo_ids GO:0003735; GO:0005840; GO:0006412;
allko_ids K02996;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073609642.1 1 137 evalue:1.0e-62 qcov:100.00 identity:88.30;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00380;
pfam_desc Ribosomal protein S9/S16;
pfam_id Ribosomal_S9;
pfam_target db:Pfam-A.hmm|PF00380.19 evalue:1.8e-44 score:150.3 best_domain_score:150.2 name:Ribosomal_S9;
sprot_desc 30S ribosomal protein S9;
sprot_id sp|B0C426|RS9_ACAM1;
sprot_target db:uniprot_sprot|sp|B0C426|RS9_ACAM1 1 137 evalue:2.0e-57 qcov:100.00 identity:79.60;
41776 41321 CDS
ID metaerg.pl|04822
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0022625; GO:0003729; GO:0017148;
allko_ids K02871;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106919544.1 2 151 evalue:2.1e-72 qcov:99.30 identity:88.70;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00572;
pfam_desc Ribosomal protein L13;
pfam_id Ribosomal_L13;
pfam_target db:Pfam-A.hmm|PF00572.18 evalue:2.4e-58 score:195.1 best_domain_score:194.9 name:Ribosomal_L13;
sprot_desc 50S ribosomal protein L13;
sprot_id sp|P73294|RL13_SYNY3;
sprot_target db:uniprot_sprot|sp|P73294|RL13_SYNY3 1 150 evalue:1.4e-64 qcov:99.30 identity:76.70;
tigrfam_acc TIGR01066;
tigrfam_desc ribosomal protein uL13;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplM_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01066 evalue:3.6e-63 score:210.7 best_domain_score:210.5 name:TIGR01066;
42701 41829 CDS
ID metaerg.pl|04823
allec_ids 5.4.99.12;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0106029; GO:0031119;
allko_ids K06173;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_084173332.1 1 290 evalue:4.4e-140 qcov:100.00 identity:81.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF01416;
pfam_desc tRNA pseudouridine synthase;
pfam_id PseudoU_synth_1;
pfam_target db:Pfam-A.hmm|PF01416.20 evalue:1.4e-27 score:95.5 best_domain_score:60.5 name:PseudoU_synth_1;
sprot_desc tRNA pseudouridine synthase A;
sprot_id sp|B7K222|TRUA_CYAP8;
sprot_target db:uniprot_sprot|sp|B7K222|TRUA_CYAP8 23 283 evalue:1.8e-100 qcov:90.00 identity:64.40;
tigrfam_acc TIGR00071;
tigrfam_desc tRNA pseudouridine(38-40) synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name hisT_truA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00071 evalue:1.9e-62 score:210.1 best_domain_score:209.9 name:TIGR00071;
43083 42733 CDS
ID metaerg.pl|04824
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02879;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073609640.1 1 116 evalue:3.4e-51 qcov:100.00 identity:92.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF01196;
pfam_desc Ribosomal protein L17;
pfam_id Ribosomal_L17;
pfam_target db:Pfam-A.hmm|PF01196.19 evalue:5.8e-35 score:119.3 best_domain_score:119.1 name:Ribosomal_L17;
sprot_desc 50S ribosomal protein L17;
sprot_id sp|Q8DMK9|RL17_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DMK9|RL17_THEEB 1 115 evalue:3.2e-48 qcov:99.10 identity:83.50;
tigrfam_acc TIGR00059;
tigrfam_desc ribosomal protein bL17;
tigrfam_mainrole Protein synthesis;
tigrfam_name L17;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00059 evalue:1.2e-42 score:143.9 best_domain_score:143.7 name:TIGR00059;
44100 43153 CDS
ID metaerg.pl|04825
allec_ids 2.7.7.6;
allgo_ids GO:0003899; GO:0006351; GO:0046983; GO:0003677;
allko_ids K03040;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106919546.1 1 315 evalue:1.9e-160 qcov:100.00 identity:93.00;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF14520; PF01000; PF03118; PF01193;
pfam_desc Helix-hairpin-helix domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; RNA polymerase Rpb3/Rpb11 dimerisation domain;
pfam_id HHH_5; RNA_pol_A_bac; RNA_pol_A_CTD; RNA_pol_L;
pfam_target db:Pfam-A.hmm|PF14520.6 evalue:2.7e-07 score:30.3 best_domain_score:25.6 name:HHH_5; db:Pfam-A.hmm|PF01000.26 evalue:2.1e-21 score:75.6 best_domain_score:74.3 name:RNA_pol_A_bac; db:Pfam-A.hmm|PF03118.15 evalue:5.6e-27 score:92.5 best_domain_score:91.6 name:RNA_pol_A_CTD; db:Pfam-A.hmm|PF01193.24 evalue:1.8e-22 score:77.8 best_domain_score:76.8 name:RNA_pol_L;
sprot_desc DNA-directed RNA polymerase subunit alpha;
sprot_id sp|Q3MF97|RPOA_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MF97|RPOA_ANAVT 1 313 evalue:8.0e-126 qcov:99.40 identity:69.60;
tigrfam_acc TIGR02027;
tigrfam_desc DNA-directed RNA polymerase, alpha subunit;
tigrfam_mainrole Transcription;
tigrfam_name rpoA;
tigrfam_sub1role DNA-dependent RNA polymerase;
tigrfam_target db:TIGRFAMs.hmm|TIGR02027 evalue:2.4e-104 score:347.8 best_domain_score:347.6 name:TIGR02027;
44550 44158 CDS
ID metaerg.pl|04826
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02948;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073609638.1 1 130 evalue:1.5e-63 qcov:100.00 identity:99.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00411;
pfam_desc Ribosomal protein S11;
pfam_id Ribosomal_S11;
pfam_target db:Pfam-A.hmm|PF00411.19 evalue:5.2e-51 score:170.9 best_domain_score:170.7 name:Ribosomal_S11;
sprot_desc 30S ribosomal protein S11;
sprot_id sp|B0JY39|RS11_MICAN;
sprot_target db:uniprot_sprot|sp|B0JY39|RS11_MICAN 1 130 evalue:3.5e-59 qcov:100.00 identity:86.90;
tigrfam_acc TIGR03632;
tigrfam_desc ribosomal protein uS11;
tigrfam_mainrole Protein synthesis;
tigrfam_name uS11_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03632 evalue:1.8e-57 score:192.0 best_domain_score:191.8 name:TIGR03632;
45070 44687 CDS
ID metaerg.pl|04827
allgo_ids GO:0003723; GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843; GO:0000049;
allko_ids K02952;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV10159.1 1 127 evalue:1.4e-58 qcov:100.00 identity:94.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00416;
pfam_desc Ribosomal protein S13/S18;
pfam_id Ribosomal_S13;
pfam_target db:Pfam-A.hmm|PF00416.22 evalue:1.1e-32 score:112.3 best_domain_score:107.3 name:Ribosomal_S13;
sprot_desc 30S ribosomal protein S13;
sprot_id sp|Q31L28|RS13_SYNE7;
sprot_target db:uniprot_sprot|sp|Q31L28|RS13_SYNE7 1 126 evalue:2.2e-50 qcov:99.20 identity:83.30;
tigrfam_acc TIGR03631;
tigrfam_desc ribosomal protein uS13;
tigrfam_mainrole Protein synthesis;
tigrfam_name uS13_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03631 evalue:5.6e-52 score:174.1 best_domain_score:173.8 name:TIGR03631;
46031 45630 CDS
ID metaerg.pl|04828
allgo_ids GO:0010207; GO:0009523; GO:0009579; GO:0031977; GO:0042651; GO:0010206;
allko_ids K08902;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106868802.1 1 133 evalue:7.4e-58 qcov:100.00 identity:91.70;
kegg_pathway_id 00195;
kegg_pathway_name Photosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF13326;
pfam_desc Photosystem II Pbs27;
pfam_id PSII_Pbs27;
pfam_target db:Pfam-A.hmm|PF13326.6 evalue:4.2e-25 score:88.0 best_domain_score:87.9 name:PSII_Pbs27;
sp YES;
sprot_desc Photosystem II lipoprotein Psb27;
sprot_id sp|Q8DG60|PSB27_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DG60|PSB27_THEEB 1 133 evalue:4.7e-35 qcov:100.00 identity:60.90;
tigrfam_acc TIGR03044;
tigrfam_desc photosystem II protein Psb27;
tigrfam_mainrole Energy metabolism;
tigrfam_name PS_II_psb27;
tigrfam_sub1role Photosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR03044 evalue:1.5e-54 score:182.8 best_domain_score:182.7 name:TIGR03044;
tm_num 1;
45630 45692 lipoprotein_signal_peptide
ID metaerg.pl|04829
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
46031 45630 transmembrane_helix
ID metaerg.pl|04830
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology o45639-45707i;
48003 46135 CDS
ID metaerg.pl|04831
allgo_ids GO:0005524; GO:0009507; GO:0003676;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106903007.1 54 622 evalue:2.8e-277 qcov:91.50 identity:85.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00004; PF03266; PF01424;
pfam_desc ATPase family associated with various cellular activities (AAA); NTPase; R3H domain;
pfam_id AAA; NTPase_1; R3H;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:4.1e-06 score:26.5 best_domain_score:25.4 name:AAA; db:Pfam-A.hmm|PF03266.15 evalue:2.6e-06 score:26.7 best_domain_score:12.1 name:NTPase_1; db:Pfam-A.hmm|PF01424.22 evalue:1e-11 score:43.9 best_domain_score:41.9 name:R3H;
sprot_desc hypothetical protein;
sprot_id sp|P51281|YCF45_PORPU;
sprot_target db:uniprot_sprot|sp|P51281|YCF45_PORPU 54 621 evalue:9.2e-166 qcov:91.30 identity:55.10;
49410 48154 CDS
ID metaerg.pl|04832
allko_ids K04014; K11260; K00532; K00443; K00124; K00533; K11181; K00265; K08349; K00390; K00170; K00176; K03388; K00226; K00335; K00171; K00441; K00205;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV10157.1 6 413 evalue:9.2e-131 qcov:97.60 identity:60.00;
kegg_pathway_id 00920; 00010; 00020; 00910; 02020; 00251; 00633; 00680; 00190; 00130; 00720; 00240; 00620; 00650; 00640; 00790; 00630;
kegg_pathway_name Sulfur metabolism; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Nitrogen metabolism; Two-component system - General; Glutamate metabolism; Trinitrotoluene degradation; Methane metabolism; Oxidative phosphorylation; Ubiquinone biosynthesis; Reductive carboxylate cycle (CO2 fixation); Pyrimidine metabolism; Pyruvate metabolism; Butanoate metabolism; Propanoate metabolism; Folate biosynthesis; Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00037; PF12837; PF12838; PF12617;
pfam_desc 4Fe-4S binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; Iron-Sulfur binding protein C terminal;
pfam_id Fer4; Fer4_6; Fer4_7; LdpA_C;
pfam_target db:Pfam-A.hmm|PF00037.27 evalue:7.4e-05 score:21.6 best_domain_score:21.6 name:Fer4; db:Pfam-A.hmm|PF12837.7 evalue:7.5e-07 score:28.2 best_domain_score:19.7 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:4.4e-10 score:39.2 best_domain_score:21.4 name:Fer4_7; db:Pfam-A.hmm|PF12617.8 evalue:1.4e-64 score:216.4 best_domain_score:215.7 name:LdpA_C;
49979 49512 CDS
ID metaerg.pl|04833
allec_ids 7.1.1.-;
allgo_ids GO:0016020; GO:0016655; GO:0055114; GO:0042651; GO:0048038;
allko_ids K05585;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV10156.1 1 155 evalue:7.5e-70 qcov:100.00 identity:84.50;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF11909;
pfam_desc NADH-quinone oxidoreductase cyanobacterial subunit N;
pfam_id NdhN;
pfam_target db:Pfam-A.hmm|PF11909.8 evalue:7e-71 score:236.1 best_domain_score:235.9 name:NdhN;
sprot_desc NAD(P)H-quinone oxidoreductase subunit N;
sprot_id sp|Q110A6|NDHN_TRIEI;
sprot_target db:uniprot_sprot|sp|Q110A6|NDHN_TRIEI 1 155 evalue:4.8e-55 qcov:100.00 identity:63.20;
50438 51073 CDS
ID metaerg.pl|04834
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02906;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017297647.1 1 211 evalue:1.5e-100 qcov:100.00 identity:85.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00297;
pfam_desc Ribosomal protein L3;
pfam_id Ribosomal_L3;
pfam_target db:Pfam-A.hmm|PF00297.22 evalue:8.1e-17 score:60.5 best_domain_score:56.6 name:Ribosomal_L3;
sprot_desc 50S ribosomal protein L3;
sprot_id sp|B0C1D3|RL3_ACAM1;
sprot_target db:uniprot_sprot|sp|B0C1D3|RL3_ACAM1 1 206 evalue:2.1e-82 qcov:97.60 identity:72.30;
tigrfam_acc TIGR03625;
tigrfam_desc 50S ribosomal protein uL3;
tigrfam_name L3_bact;
tigrfam_target db:TIGRFAMs.hmm|TIGR03625 evalue:1.3e-87 score:292.0 best_domain_score:291.8 name:TIGR03625;
51139 51771 CDS
ID metaerg.pl|04835
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02926;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073609632.1 1 210 evalue:3.5e-94 qcov:100.00 identity:82.40;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00573;
pfam_desc Ribosomal protein L4/L1 family;
pfam_id Ribosomal_L4;
pfam_target db:Pfam-A.hmm|PF00573.22 evalue:7.7e-63 score:210.9 best_domain_score:210.7 name:Ribosomal_L4;
sprot_desc 50S ribosomal protein L4;
sprot_id sp|B0C1D4|RL4_ACAM1;
sprot_target db:uniprot_sprot|sp|B0C1D4|RL4_ACAM1 1 210 evalue:1.2e-85 qcov:100.00 identity:75.20;
tigrfam_acc TIGR03953;
tigrfam_desc 50S ribosomal protein uL4;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplD_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03953 evalue:4.4e-70 score:234.0 best_domain_score:233.8 name:TIGR03953;
51761 52066 CDS
ID metaerg.pl|04836
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02892;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_081972852.1 1 101 evalue:9.3e-37 qcov:100.00 identity:78.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00276;
pfam_desc Ribosomal protein L23;
pfam_id Ribosomal_L23;
pfam_target db:Pfam-A.hmm|PF00276.20 evalue:1.3e-31 score:108.1 best_domain_score:107.9 name:Ribosomal_L23;
sprot_desc 50S ribosomal protein L23;
sprot_id sp|B1WQR2|RL23_CYAA5;
sprot_target db:uniprot_sprot|sp|B1WQR2|RL23_CYAA5 10 101 evalue:3.5e-30 qcov:91.10 identity:66.30;
52120 52983 CDS
ID metaerg.pl|04837
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0015934; GO:0019843; GO:0016740;
allko_ids K02886;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV10153.1 1 287 evalue:6.3e-155 qcov:100.00 identity:94.40;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00181; PF03947;
pfam_desc Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain;
pfam_id Ribosomal_L2; Ribosomal_L2_C;
pfam_target db:Pfam-A.hmm|PF00181.23 evalue:1.1e-30 score:104.6 best_domain_score:102.9 name:Ribosomal_L2; db:Pfam-A.hmm|PF03947.18 evalue:1.3e-55 score:186.2 best_domain_score:185.2 name:Ribosomal_L2_C;
sprot_desc 50S ribosomal protein L2;
sprot_id sp|Q31L10|RL2_SYNE7;
sprot_target db:uniprot_sprot|sp|Q31L10|RL2_SYNE7 1 287 evalue:2.0e-131 qcov:100.00 identity:78.70;
tigrfam_acc TIGR01171;
tigrfam_desc ribosomal protein uL2;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplB_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01171 evalue:9.2e-136 score:450.8 best_domain_score:450.6 name:TIGR01171;
53032 53310 CDS
ID metaerg.pl|04838
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0015935; GO:0019843;
allko_ids K02965;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035991915.1 1 92 evalue:1.1e-44 qcov:100.00 identity:97.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00203;
pfam_desc Ribosomal protein S19;
pfam_id Ribosomal_S19;
pfam_target db:Pfam-A.hmm|PF00203.21 evalue:2.2e-38 score:129.3 best_domain_score:129.1 name:Ribosomal_S19;
sprot_desc 30S ribosomal protein S19;
sprot_id sp|B7KHZ1|RS19_CYAP7;
sprot_target db:uniprot_sprot|sp|B7KHZ1|RS19_CYAP7 1 92 evalue:7.2e-43 qcov:100.00 identity:88.00;
tigrfam_acc TIGR01050;
tigrfam_desc ribosomal protein uS19;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpsS_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01050 evalue:8.5e-49 score:163.0 best_domain_score:162.9 name:TIGR01050;
53328 53684 CDS
ID metaerg.pl|04839
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0015934; GO:0019843;
allko_ids K02890;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035991913.1 1 118 evalue:8.9e-55 qcov:100.00 identity:93.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00237;
pfam_desc Ribosomal protein L22p/L17e;
pfam_id Ribosomal_L22;
pfam_target db:Pfam-A.hmm|PF00237.19 evalue:7.9e-35 score:118.4 best_domain_score:118.3 name:Ribosomal_L22;
sprot_desc 50S ribosomal protein L22;
sprot_id sp|B0JHZ8|RL22_MICAN;
sprot_target db:uniprot_sprot|sp|B0JHZ8|RL22_MICAN 1 115 evalue:4.2e-51 qcov:97.50 identity:81.70;
tigrfam_acc TIGR01044;
tigrfam_desc ribosomal protein uL22;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplV_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01044 evalue:2.9e-44 score:148.7 best_domain_score:148.5 name:TIGR01044;
53761 54492 CDS
ID metaerg.pl|04840
allgo_ids GO:0003723; GO:0015935; GO:0003729; GO:0019843; GO:0003735; GO:0006412;
allko_ids K02982;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV10150.1 1 242 evalue:5.0e-121 qcov:99.60 identity:92.60;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF07650; PF00189;
pfam_desc KH domain; Ribosomal protein S3, C-terminal domain;
pfam_id KH_2; Ribosomal_S3_C;
pfam_target db:Pfam-A.hmm|PF07650.17 evalue:2.2e-19 score:68.3 best_domain_score:67.3 name:KH_2; db:Pfam-A.hmm|PF00189.20 evalue:1.7e-40 score:136.7 best_domain_score:132.2 name:Ribosomal_S3_C;
sprot_desc 30S ribosomal protein S3;
sprot_id sp|Q31L13|RS3_SYNE7;
sprot_target db:uniprot_sprot|sp|Q31L13|RS3_SYNE7 1 242 evalue:7.9e-105 qcov:99.60 identity:80.70;
tigrfam_acc TIGR01009;
tigrfam_desc ribosomal protein uS3;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpsC_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01009 evalue:5.6e-89 score:296.6 best_domain_score:296.4 name:TIGR01009;
54553 54972 CDS
ID metaerg.pl|04841
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0019843; GO:0000049;
allko_ids K02878;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_017297640.1 1 139 evalue:4.2e-72 qcov:100.00 identity:97.10;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00252;
pfam_desc Ribosomal protein L16p/L10e;
pfam_id Ribosomal_L16;
pfam_target db:Pfam-A.hmm|PF00252.18 evalue:1.9e-53 score:179.2 best_domain_score:179.0 name:Ribosomal_L16;
sprot_desc 50S ribosomal protein L16;
sprot_id sp|B0C1E0|RL16_ACAM1;
sprot_target db:uniprot_sprot|sp|B0C1E0|RL16_ACAM1 1 139 evalue:9.5e-63 qcov:100.00 identity:80.60;
tigrfam_acc TIGR01164;
tigrfam_desc ribosomal protein uL16;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplP_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01164 evalue:7.8e-64 score:212.6 best_domain_score:212.4 name:TIGR01164;
54977 55249 CDS
ID metaerg.pl|04842
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02904;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073609627.1 1 90 evalue:5.1e-26 qcov:100.00 identity:80.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00831;
pfam_desc Ribosomal L29 protein;
pfam_id Ribosomal_L29;
pfam_target db:Pfam-A.hmm|PF00831.23 evalue:3.3e-19 score:67.8 best_domain_score:67.3 name:Ribosomal_L29;
sprot_desc 50S ribosomal protein L29;
sprot_id sp|B1WQR8|RL29_CYAA5;
sprot_target db:uniprot_sprot|sp|B1WQR8|RL29_CYAA5 1 78 evalue:6.0e-18 qcov:86.70 identity:60.30;
tigrfam_acc TIGR00012;
tigrfam_desc ribosomal protein uL29;
tigrfam_mainrole Protein synthesis;
tigrfam_name L29;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00012 evalue:5.3e-18 score:63.9 best_domain_score:63.8 name:TIGR00012;
55266 55517 CDS
ID metaerg.pl|04843
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0022627; GO:0019843;
allko_ids K02961;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035991905.1 1 83 evalue:1.4e-33 qcov:100.00 identity:92.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00366;
pfam_desc Ribosomal protein S17;
pfam_id Ribosomal_S17;
pfam_target db:Pfam-A.hmm|PF00366.20 evalue:5.4e-32 score:108.9 best_domain_score:108.7 name:Ribosomal_S17;
sprot_desc 30S ribosomal protein S17;
sprot_id sp|P73311|RS17_SYNY3;
sprot_target db:uniprot_sprot|sp|P73311|RS17_SYNY3 1 81 evalue:3.5e-28 qcov:97.60 identity:74.10;
tigrfam_acc TIGR03635;
tigrfam_desc ribosomal protein uS17;
tigrfam_mainrole Protein synthesis;
tigrfam_name uS17_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03635 evalue:1.7e-33 score:113.7 best_domain_score:113.5 name:TIGR03635;
55526 55891 CDS
ID metaerg.pl|04844
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0015934; GO:0019843;
allko_ids K02874;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073609625.1 1 121 evalue:3.0e-58 qcov:100.00 identity:97.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00238;
pfam_desc Ribosomal protein L14p/L23e;
pfam_id Ribosomal_L14;
pfam_target db:Pfam-A.hmm|PF00238.19 evalue:3.2e-54 score:181.5 best_domain_score:181.3 name:Ribosomal_L14;
sprot_desc 50S ribosomal protein L14;
sprot_id sp|Q110B7|RL14_TRIEI;
sprot_target db:uniprot_sprot|sp|Q110B7|RL14_TRIEI 1 121 evalue:1.7e-55 qcov:100.00 identity:91.80;
tigrfam_acc TIGR01067;
tigrfam_desc ribosomal protein uL14;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplN_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01067 evalue:2.2e-56 score:188.2 best_domain_score:188.0 name:TIGR01067;
55891 56238 CDS
ID metaerg.pl|04845
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02895;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV10145.1 1 115 evalue:4.2e-49 qcov:100.00 identity:87.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00467; PF17136;
pfam_desc KOW motif; Ribosomal proteins 50S L24/mitochondrial 39S L24;
pfam_id KOW; ribosomal_L24;
pfam_target db:Pfam-A.hmm|PF00467.29 evalue:1.8e-08 score:33.3 best_domain_score:33.2 name:KOW; db:Pfam-A.hmm|PF17136.4 evalue:4.5e-24 score:83.9 best_domain_score:83.9 name:ribosomal_L24;
sprot_desc 50S ribosomal protein L24;
sprot_id sp|Q110B8|RL24_TRIEI;
sprot_target db:uniprot_sprot|sp|Q110B8|RL24_TRIEI 7 115 evalue:2.0e-42 qcov:94.80 identity:76.10;
tigrfam_acc TIGR01079;
tigrfam_desc ribosomal protein uL24;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplX_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01079 evalue:1.6e-38 score:130.4 best_domain_score:130.2 name:TIGR01079;
56334 56879 CDS
ID metaerg.pl|04846
allgo_ids GO:0005840; GO:0019843; GO:0003735; GO:0000049; GO:0006412;
allko_ids K02931;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035991899.1 1 181 evalue:3.4e-90 qcov:100.00 identity:93.40;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00281; PF00673;
pfam_desc Ribosomal protein L5; ribosomal L5P family C-terminus;
pfam_id Ribosomal_L5; Ribosomal_L5_C;
pfam_target db:Pfam-A.hmm|PF00281.19 evalue:4.1e-24 score:83.9 best_domain_score:83.4 name:Ribosomal_L5; db:Pfam-A.hmm|PF00673.21 evalue:7.4e-40 score:134.3 best_domain_score:133.5 name:Ribosomal_L5_C;
sprot_desc 50S ribosomal protein L5;
sprot_id sp|B0C1E5|RL5_ACAM1;
sprot_target db:uniprot_sprot|sp|B0C1E5|RL5_ACAM1 1 181 evalue:2.4e-82 qcov:100.00 identity:81.80;
56906 57307 CDS
ID metaerg.pl|04847
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02994;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073609622.1 1 133 evalue:3.4e-63 qcov:100.00 identity:93.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00410;
pfam_desc Ribosomal protein S8;
pfam_id Ribosomal_S8;
pfam_target db:Pfam-A.hmm|PF00410.19 evalue:2.6e-52 score:175.3 best_domain_score:175.2 name:Ribosomal_S8;
sprot_desc 30S ribosomal protein S8;
sprot_id sp|Q8YPJ2|RS8_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YPJ2|RS8_NOSS1 1 133 evalue:1.7e-53 qcov:100.00 identity:79.70;
57380 57919 CDS
ID metaerg.pl|04848
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02933;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035991895.1 1 179 evalue:6.8e-91 qcov:100.00 identity:95.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00347;
pfam_desc Ribosomal protein L6;
pfam_id Ribosomal_L6;
pfam_target db:Pfam-A.hmm|PF00347.23 evalue:2e-40 score:136.6 best_domain_score:73.5 name:Ribosomal_L6;
sprot_desc 50S ribosomal protein L6;
sprot_id sp|Q31L21|RL6_SYNE7;
sprot_target db:uniprot_sprot|sp|Q31L21|RL6_SYNE7 1 179 evalue:7.2e-71 qcov:100.00 identity:74.30;
tigrfam_acc TIGR03654;
tigrfam_desc ribosomal protein uL6;
tigrfam_mainrole Protein synthesis;
tigrfam_name L6_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03654 evalue:3.9e-75 score:250.6 best_domain_score:250.4 name:TIGR03654;
57923 58285 CDS
ID metaerg.pl|04849
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0022625; GO:0008097;
allko_ids K02881;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035991893.1 1 120 evalue:5.0e-45 qcov:100.00 identity:86.70;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00861;
pfam_desc Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast;
pfam_id Ribosomal_L18p;
pfam_target db:Pfam-A.hmm|PF00861.22 evalue:4.2e-48 score:161.8 best_domain_score:161.6 name:Ribosomal_L18p;
sprot_desc 50S ribosomal protein L18;
sprot_id sp|P73305|RL18_SYNY3;
sprot_target db:uniprot_sprot|sp|P73305|RL18_SYNY3 1 119 evalue:1.0e-36 qcov:99.20 identity:68.90;
tigrfam_acc TIGR00060;
tigrfam_desc ribosomal protein uL18;
tigrfam_mainrole Protein synthesis;
tigrfam_name L18_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00060 evalue:2.7e-42 score:142.9 best_domain_score:142.7 name:TIGR00060;
58368 58889 CDS
ID metaerg.pl|04850
allgo_ids GO:0003723; GO:0003735; GO:0005840; GO:0006412; GO:0015935; GO:0019843;
allko_ids K02988;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035991891.1 1 173 evalue:1.9e-85 qcov:100.00 identity:100.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00333; PF03719;
pfam_desc Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain;
pfam_id Ribosomal_S5; Ribosomal_S5_C;
pfam_target db:Pfam-A.hmm|PF00333.20 evalue:9.5e-23 score:79.2 best_domain_score:78.6 name:Ribosomal_S5; db:Pfam-A.hmm|PF03719.15 evalue:1.2e-27 score:94.4 best_domain_score:93.9 name:Ribosomal_S5_C;
sprot_desc 30S ribosomal protein S5;
sprot_id sp|P59126|RS5_THEEB;
sprot_target db:uniprot_sprot|sp|P59126|RS5_THEEB 1 172 evalue:1.3e-72 qcov:99.40 identity:83.70;
tigrfam_acc TIGR01021;
tigrfam_desc ribosomal protein uS5;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpsE_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01021 evalue:3e-64 score:214.7 best_domain_score:214.5 name:TIGR01021;
58912 59358 CDS
ID metaerg.pl|04851
allgo_ids GO:0015934; GO:0019843; GO:0003735; GO:0006412;
allko_ids K02876;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO44878.1 1 148 evalue:1.0e-63 qcov:100.00 identity:87.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00828;
pfam_desc Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A;
pfam_id Ribosomal_L27A;
pfam_target db:Pfam-A.hmm|PF00828.19 evalue:3.8e-35 score:120.6 best_domain_score:120.1 name:Ribosomal_L27A;
sp YES;
sprot_desc 50S ribosomal protein L15;
sprot_id sp|B7K231|RL15_CYAP8;
sprot_target db:uniprot_sprot|sp|B7K231|RL15_CYAP8 1 148 evalue:1.7e-54 qcov:100.00 identity:74.30;
tigrfam_acc TIGR01071;
tigrfam_desc ribosomal protein uL15;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplO_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01071 evalue:1.2e-48 score:163.7 best_domain_score:163.6 name:TIGR01071;
58912 59037 signal_peptide
ID metaerg.pl|04852
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
59449 60762 CDS
ID metaerg.pl|04853
allgo_ids GO:0015031; GO:0016020; GO:0016021; GO:0005886; GO:0042651; GO:0065002; GO:0006605; GO:0043952;
allko_ids K03076;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV10138.1 1 437 evalue:2.8e-215 qcov:100.00 identity:93.10;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00344;
pfam_desc SecY translocase;
pfam_id SecY;
pfam_target db:Pfam-A.hmm|PF00344.20 evalue:5.8e-108 score:360.0 best_domain_score:359.7 name:SecY;
sprot_desc hypothetical protein;
sprot_id sp|P0A4H0|SECY_SYNE7;
sprot_target db:uniprot_sprot|sp|P0A4H0|SECY_SYNE7 1 436 evalue:8.4e-174 qcov:99.80 identity:71.80;
tigrfam_acc TIGR00967;
tigrfam_desc preprotein translocase, SecY subunit;
tigrfam_mainrole Protein fate;
tigrfam_name 3a0501s007;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00967 evalue:8.6e-139 score:462.1 best_domain_score:461.9 name:TIGR00967;
tm_num 10;
59449 60762 transmembrane_helix
ID metaerg.pl|04854
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology i59509-59577o59662-59730i59833-59901o59911-59979i59998-60057o60100-60168i60271-60339o60397-60465i60553-60621o60637-60696i;
60780 61316 CDS
ID metaerg.pl|04855
allec_ids 2.7.4.3; 2.7.4.-;
allgo_ids GO:0005737; GO:0004017; GO:0005524; GO:0044209;
allko_ids K01939; K00939;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106867741.1 1 178 evalue:3.3e-69 qcov:100.00 identity:73.00;
kegg_pathway_id 00252; 00230;
kegg_pathway_name Alanine and aspartate metabolism; Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6577; PWY-6126; PRPP-PWY; P1-PWY; PWY-5107;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; farnesylcysteine salvage pathway;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; ; phytol salvage pathway;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; ; DITERPENOID-SYN;;
pfam_acc PF13207; PF13238; PF13671; PF00406;
pfam_desc AAA domain; AAA domain; AAA domain; Adenylate kinase;
pfam_id AAA_17; AAA_18; AAA_33; ADK;
pfam_target db:Pfam-A.hmm|PF13207.6 evalue:6e-32 score:110.2 best_domain_score:109.8 name:AAA_17; db:Pfam-A.hmm|PF13238.6 evalue:5.6e-08 score:32.6 best_domain_score:32.1 name:AAA_18; db:Pfam-A.hmm|PF13671.6 evalue:1.5e-06 score:27.6 best_domain_score:26.8 name:AAA_33; db:Pfam-A.hmm|PF00406.22 evalue:6.4e-55 score:184.6 best_domain_score:184.4 name:ADK;
sprot_desc Adenylate kinase 1;
sprot_id sp|Q8YPJ8|KAD1_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YPJ8|KAD1_NOSS1 1 173 evalue:3.6e-54 qcov:97.20 identity:59.00;
tigrfam_acc TIGR01351;
tigrfam_desc adenylate kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name adk;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01351 evalue:2.2e-63 score:212.8 best_domain_score:165.4 name:TIGR01351;
61457 61681 CDS
ID metaerg.pl|04856
allgo_ids GO:0003723; GO:0003743; GO:0006413; GO:0005737; GO:0043022; GO:0019843;
allko_ids K02518;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae;g__Microcoleus;s__Microcoleus nigroviridis;
genomedb_acc GCF_000317475.1;
genomedb_target db:genomedb|GCF_000317475.1|WP_006276978.1 1 74 evalue:9.2e-34 qcov:100.00 identity:100.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF01176; PF00575;
pfam_desc Translation initiation factor 1A / IF-1; S1 RNA binding domain;
pfam_id eIF-1a; S1;
pfam_target db:Pfam-A.hmm|PF01176.19 evalue:6.2e-28 score:95.6 best_domain_score:95.5 name:eIF-1a; db:Pfam-A.hmm|PF00575.23 evalue:9.2e-05 score:22.0 best_domain_score:21.6 name:S1;
sprot_desc Translation initiation factor IF-1;
sprot_id sp|Q3MFA1|IF1_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MFA1|IF1_ANAVT 1 74 evalue:6.9e-36 qcov:100.00 identity:100.00;
tigrfam_acc TIGR00008;
tigrfam_desc translation initiation factor IF-1;
tigrfam_mainrole Protein synthesis;
tigrfam_name infA;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00008 evalue:6.9e-38 score:127.6 best_domain_score:127.5 name:TIGR00008;
62890 61847 CDS
ID metaerg.pl|04857
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV10135.1 1 347 evalue:2.3e-151 qcov:100.00 identity:77.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF07755; PF17396;
pfam_desc Domain of unknown function (DUF1611_C) P-loop domain; Domain of unknown function (DUF1611_N) Rossmann-like domain;
pfam_id DUF1611; DUF1611_N;
pfam_target db:Pfam-A.hmm|PF07755.11 evalue:1.6e-66 score:222.7 best_domain_score:222.1 name:DUF1611; db:Pfam-A.hmm|PF17396.2 evalue:8.8e-26 score:89.2 best_domain_score:88.0 name:DUF1611_N;
63926 62874 CDS
ID metaerg.pl|04858
allec_ids 5.1.1.-;
allgo_ids GO:0000287; GO:0016854; GO:0016855; GO:0009063; GO:0006518;
allko_ids K01781; K01684; K01856; K01631;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106919563.1 1 350 evalue:2.0e-155 qcov:100.00 identity:76.90;
kegg_pathway_id 00052; 00364; 00362; 00622;
kegg_pathway_name Galactose metabolism; Fluorobenzoate degradation; Benzoate degradation via hydroxylation; Toluene and xylene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF13378; PF02746;
pfam_desc Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain;
pfam_id MR_MLE_C; MR_MLE_N;
pfam_target db:Pfam-A.hmm|PF13378.6 evalue:8.3e-35 score:119.6 best_domain_score:119.1 name:MR_MLE_C; db:Pfam-A.hmm|PF02746.16 evalue:4.1e-14 score:52.0 best_domain_score:51.1 name:MR_MLE_N;
sprot_desc Hydrophobic dipeptide epimerase;
sprot_id sp|C0BK17|HYEP_FLABM;
sprot_target db:uniprot_sprot|sp|C0BK17|HYEP_FLABM 1 343 evalue:1.6e-66 qcov:98.00 identity:41.40;
64101 64790 CDS
ID metaerg.pl|04859
allgo_ids GO:0005737; GO:0004252;
allko_ids K01358;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035991725.1 1 229 evalue:2.1e-116 qcov:100.00 identity:94.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00574;
pfam_desc Clp protease;
pfam_id CLP_protease;
pfam_target db:Pfam-A.hmm|PF00574.23 evalue:6.7e-55 score:185.0 best_domain_score:183.7 name:CLP_protease;
sprot_desc Putative ATP-dependent Clp protease proteolytic subunit-like;
sprot_id sp|Q9L4P4|CLPR_SYNE7;
sprot_target db:uniprot_sprot|sp|Q9L4P4|CLPR_SYNE7 5 221 evalue:3.1e-95 qcov:94.80 identity:76.00;
64871 65506 CDS
ID metaerg.pl|04860
allec_ids 3.4.21.92;
allgo_ids GO:0005737; GO:0009368; GO:0004176; GO:0051117; GO:0004252; GO:0006515;
allko_ids K01358;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035991727.1 1 211 evalue:6.4e-104 qcov:100.00 identity:93.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00574;
pfam_desc Clp protease;
pfam_id CLP_protease;
pfam_target db:Pfam-A.hmm|PF00574.23 evalue:3.6e-86 score:286.9 best_domain_score:286.6 name:CLP_protease;
sprot_desc Probable ATP-dependent Clp protease proteolytic subunit 3;
sprot_id sp|P74467|CLPP3_SYNY3;
sprot_target db:uniprot_sprot|sp|P74467|CLPP3_SYNY3 1 197 evalue:1.1e-86 qcov:93.40 identity:79.70;
65590 66282 CDS
ID metaerg.pl|04861
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073610065.1 1 230 evalue:1.1e-69 qcov:100.00 identity:63.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00226; PF00515; PF13428; PF14559; PF07719;
pfam_desc DnaJ domain; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id DnaJ; TPR_1; TPR_14; TPR_19; TPR_2;
pfam_target db:Pfam-A.hmm|PF00226.31 evalue:4.2e-16 score:58.1 best_domain_score:56.6 name:DnaJ; db:Pfam-A.hmm|PF00515.28 evalue:7.9e-07 score:27.9 best_domain_score:27.9 name:TPR_1; db:Pfam-A.hmm|PF13428.6 evalue:4.1e-06 score:26.4 best_domain_score:15.2 name:TPR_14; db:Pfam-A.hmm|PF14559.6 evalue:2.8e-06 score:27.0 best_domain_score:22.0 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:7.1e-07 score:28.1 best_domain_score:28.1 name:TPR_2;
68515 66713 CDS
ID metaerg.pl|04862
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106872976.1 6 597 evalue:1.7e-154 qcov:98.70 identity:50.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
tm_num 6;
68515 66713 transmembrane_helix
ID metaerg.pl|04863
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology i67769-67837o67964-68017i68036-68089o68117-68185i68222-68275o68390-68458i;
68569 68883 CDS
ID metaerg.pl|04864
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
70174 68741 CDS
ID metaerg.pl|04865
allec_ids 1.13.11.75;
allgo_ids GO:0016702; GO:0055114; GO:0102162; GO:0010436; GO:0046872; GO:0016121;
allko_ids K00464;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073607425.1 5 474 evalue:3.1e-199 qcov:98.50 identity:70.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF03055;
pfam_desc Retinal pigment epithelial membrane protein;
pfam_id RPE65;
pfam_target db:Pfam-A.hmm|PF03055.15 evalue:5.4e-93 score:311.9 best_domain_score:311.6 name:RPE65;
sprot_desc Apocarotenoid-15,15'-oxygenase;
sprot_id sp|P74334|ACOX_SYNY3;
sprot_target db:uniprot_sprot|sp|P74334|ACOX_SYNY3 35 475 evalue:2.4e-49 qcov:92.50 identity:30.10;
71805 70225 CDS
ID metaerg.pl|04866
allec_ids 3.4.19.13; 2.3.2.2;
allgo_ids GO:0036374; GO:0102953; GO:0103068; GO:0006750; GO:0006751;
allko_ids K00681;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV05883.1 10 526 evalue:2.4e-221 qcov:98.30 identity:73.70;
kegg_pathway_id 00450; 00590; 00480; 00430; 00460;
kegg_pathway_name Selenoamino acid metabolism; Arachidonic acid metabolism; Glutathione metabolism; Taurine and hypotaurine metabolism; Cyanoamino acid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
metacyc_pathway_id PWY-5826; PWY-4041;
metacyc_pathway_name hypoglycin biosynthesis;; γ-glutamyl cycle;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; Reductants; Super-Pathways;;
pfam_acc PF01019;
pfam_desc Gamma-glutamyltranspeptidase;
pfam_id G_glu_transpept;
pfam_target db:Pfam-A.hmm|PF01019.21 evalue:2.5e-108 score:362.3 best_domain_score:362.1 name:G_glu_transpept;
sprot_desc Glutathione hydrolase proenzyme;
sprot_id sp|P74181|GGT_SYNY3;
sprot_target db:uniprot_sprot|sp|P74181|GGT_SYNY3 11 524 evalue:4.0e-130 qcov:97.70 identity:50.00;
tigrfam_acc TIGR00066;
tigrfam_desc gamma-glutamyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name g_glut_trans;
tigrfam_sub1role Glutathione and analogs;
tigrfam_target db:TIGRFAMs.hmm|TIGR00066 evalue:1.5e-124 score:415.5 best_domain_score:415.0 name:TIGR00066;
71896 73227 CDS
ID metaerg.pl|04867
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0042910;
allko_ids K03327;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017296893.1 4 441 evalue:5.5e-190 qcov:98.90 identity:80.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF01554;
pfam_desc MatE;
pfam_id MatE;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:3.6e-31 score:107.2 best_domain_score:62.4 name:MatE;
sprot_desc DNA damage-inducible protein F;
sprot_id sp|P28303|DINF_ECOLI;
sprot_target db:uniprot_sprot|sp|P28303|DINF_ECOLI 21 433 evalue:2.6e-53 qcov:93.20 identity:36.60;
tigrfam_acc TIGR00797;
tigrfam_desc MATE efflux family protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name matE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00797 evalue:4.6e-73 score:245.5 best_domain_score:245.1 name:TIGR00797;
tm_num 11;
71896 73227 transmembrane_helix
ID metaerg.pl|04868
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology o72040-72108i72166-72234o72322-72378i72397-72465o72478-72546i72637-72705o72715-72783i72844-72912o72955-73023i73060-73128o73138-73206i;
74883 73267 CDS
ID metaerg.pl|04869
allec_ids 3.4.11.1;
allgo_ids GO:0004177; GO:0005622; GO:0006508; GO:0005737; GO:0030145; GO:0008235;
allko_ids K01259; K01255; K11142;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106921172.1 49 536 evalue:1.4e-224 qcov:90.70 identity:82.70;
kegg_pathway_id 00330; 00480;
kegg_pathway_name Arginine and proline metabolism; Glutathione metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
metacyc_pathway_id PWY-5988; PWY-6018;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF00883; PF02789;
pfam_desc Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain;
pfam_id Peptidase_M17; Peptidase_M17_N;
pfam_target db:Pfam-A.hmm|PF00883.21 evalue:1.2e-120 score:401.7 best_domain_score:401.3 name:Peptidase_M17; db:Pfam-A.hmm|PF02789.17 evalue:3.4e-25 score:87.6 best_domain_score:86.3 name:Peptidase_M17_N;
sprot_desc Probable cytosol aminopeptidase;
sprot_id sp|B2J3G8|AMPA_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J3G8|AMPA_NOSP7 49 538 evalue:2.0e-185 qcov:91.10 identity:68.90;
74980 77181 CDS
ID metaerg.pl|04870
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106921171.1 1 733 evalue:1.0e-294 qcov:100.00 identity:68.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF01464; PF14559; PF13174;
pfam_desc Transglycosylase SLT domain; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id SLT; TPR_19; TPR_6;
pfam_target db:Pfam-A.hmm|PF01464.20 evalue:1.5e-29 score:101.3 best_domain_score:100.2 name:SLT; db:Pfam-A.hmm|PF14559.6 evalue:6.1e-07 score:29.1 best_domain_score:14.8 name:TPR_19; db:Pfam-A.hmm|PF13174.6 evalue:4.3e-07 score:29.4 best_domain_score:11.1 name:TPR_6;
sp YES;
tm_num 1;
74980 75060 signal_peptide
ID metaerg.pl|04871
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
74980 77181 transmembrane_helix
ID metaerg.pl|04872
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology i74998-75066o;
77364 79004 CDS
ID metaerg.pl|04873
allgo_ids GO:0006812; GO:0015299; GO:0016021; GO:0055085; GO:0016323; GO:0030054; GO:0010008; GO:0097708; GO:0005743; GO:0031966; GO:0005886; GO:0097228; GO:0030672; GO:0042802; GO:0010348; GO:0015385; GO:0072583; GO:0030317; GO:2001206; GO:0061178; GO:0006814;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106921933.1 7 542 evalue:4.3e-221 qcov:98.20 identity:75.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00999; PF00582;
pfam_desc Sodium/hydrogen exchanger family; Universal stress protein family;
pfam_id Na_H_Exchanger; Usp;
pfam_target db:Pfam-A.hmm|PF00999.21 evalue:2.3e-26 score:91.7 best_domain_score:91.1 name:Na_H_Exchanger; db:Pfam-A.hmm|PF00582.26 evalue:2.5e-17 score:62.9 best_domain_score:55.6 name:Usp;
sprot_desc Sodium/hydrogen exchanger 9B2;
sprot_id sp|Q5BKR2|SL9B2_MOUSE;
sprot_target db:uniprot_sprot|sp|Q5BKR2|SL9B2_MOUSE 8 412 evalue:1.3e-22 qcov:74.20 identity:29.10;
tm_num 12;
77364 79004 transmembrane_helix
ID metaerg.pl|04874
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology i77382-77441o77529-77597i77634-77702o77715-77783i77859-77927o77970-78038i78057-78125o78138-78206i78231-78299o78309-78377i78507-78575o78618-78686i;
79751 79107 CDS
ID metaerg.pl|04875
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106871674.1 1 212 evalue:1.2e-70 qcov:99.10 identity:69.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF13413; PF13560;
pfam_desc Helix-turn-helix domain; Helix-turn-helix domain;
pfam_id HTH_25; HTH_31;
pfam_target db:Pfam-A.hmm|PF13413.6 evalue:7.3e-20 score:69.8 best_domain_score:69.0 name:HTH_25; db:Pfam-A.hmm|PF13560.6 evalue:2.2e-06 score:27.1 best_domain_score:25.9 name:HTH_31;
sp YES;
79107 79220 signal_peptide
ID metaerg.pl|04876
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
80413 80069 CDS
ID metaerg.pl|04877
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106870953.1 5 114 evalue:2.3e-47 qcov:96.50 identity:90.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
81247 80480 CDS
ID metaerg.pl|04878
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO42982.1 26 255 evalue:4.0e-60 qcov:90.20 identity:58.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00805; PF13576; PF13599;
pfam_desc Pentapeptide repeats (8 copies); Pentapeptide repeats (9 copies); Pentapeptide repeats (9 copies);
pfam_id Pentapeptide; Pentapeptide_3; Pentapeptide_4;
pfam_target db:Pfam-A.hmm|PF00805.22 evalue:3.3e-54 score:179.3 best_domain_score:46.5 name:Pentapeptide; db:Pfam-A.hmm|PF13576.6 evalue:3.3e-24 score:84.0 best_domain_score:24.6 name:Pentapeptide_3; db:Pfam-A.hmm|PF13599.6 evalue:2.4e-33 score:113.4 best_domain_score:36.0 name:Pentapeptide_4;
sp YES;
tm_num 1;
80480 80584 signal_peptide
ID metaerg.pl|04879
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
81247 80480 transmembrane_helix
ID metaerg.pl|04880
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology i80516-80584o;
81333 83141 CDS
ID metaerg.pl|04881
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035994706.1 8 602 evalue:1.5e-214 qcov:98.80 identity:64.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
tm_num 1;
81333 83141 transmembrane_helix
ID metaerg.pl|04882
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology i81420-81488o;
83138 85093 CDS
ID metaerg.pl|04883
allgo_ids GO:0000160;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073608542.1 1 647 evalue:8.2e-211 qcov:99.40 identity:63.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF12452; PF00072;
pfam_desc Protein of unknown function (DUF3685) ; Response regulator receiver domain;
pfam_id DUF3685; Response_reg;
pfam_target db:Pfam-A.hmm|PF12452.8 evalue:1e-77 score:259.4 best_domain_score:258.9 name:DUF3685; db:Pfam-A.hmm|PF00072.24 evalue:3.5e-13 score:48.9 best_domain_score:26.7 name:Response_reg;
sprot_desc Ycf55-like protein;
sprot_id sp|P74126|YC55L_SYNY3;
sprot_target db:uniprot_sprot|sp|P74126|YC55L_SYNY3 1 635 evalue:4.8e-64 qcov:97.50 identity:29.60;
86370 85573 CDS
ID metaerg.pl|04884
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106923664.1 1 241 evalue:4.4e-62 qcov:90.90 identity:55.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:4.2e-14 score:52.0 best_domain_score:52.0 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:2.7e-21 score:76.4 best_domain_score:76.1 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:6.5e-09 score:34.6 best_domain_score:32.2 name:Hydrolase_4;
86866 86411 CDS
ID metaerg.pl|04885
allgo_ids GO:0016787;
allko_ids K13522; K01529; K03574; K01515; K08310; K00952;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106923663.1 1 150 evalue:9.0e-60 qcov:99.30 identity:73.30;
kegg_pathway_id 00790; 00230; 00760;
kegg_pathway_name Folate biosynthesis; Purine metabolism; Nicotinate and nicotinamide metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:3.3e-20 score:71.7 best_domain_score:71.4 name:NUDIX;
sp YES;
86411 86476 signal_peptide
ID metaerg.pl|04886
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
87346 86882 CDS
ID metaerg.pl|04887
allec_ids 1.11.1.15;
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005737; GO:0008379; GO:0045454; GO:0034599;
allko_ids K03386; K11185; K11186; K13279; K11065; K00430; K03564; K11188;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035986072.1 1 154 evalue:1.7e-74 qcov:100.00 identity:88.30;
kegg_pathway_id 00480; 00360; 00680; 00940;
kegg_pathway_name Glutathione metabolism; Phenylalanine metabolism; Methane metabolism; Phenylpropanoid biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:2.6e-41 score:139.6 best_domain_score:139.4 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:7.3e-29 score:99.6 best_domain_score:99.4 name:Redoxin;
sprot_desc Putative peroxiredoxin bcp;
sprot_id sp|Q83CY8|BCP_COXBU;
sprot_target db:uniprot_sprot|sp|Q83CY8|BCP_COXBU 1 151 evalue:8.1e-39 qcov:98.10 identity:49.70;
88170 87397 CDS
ID metaerg.pl|04888
allec_ids 1.1.1.381;
allgo_ids GO:0003824; GO:0050662; GO:0035527;
allko_ids K00022; K12420; K16066;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073606811.1 1 255 evalue:3.0e-100 qcov:99.20 identity:79.00;
kegg_pathway_id 00650; 00071; 00062; 00380; 00930; 00280; 00281; 00310;
kegg_pathway_name Butanoate metabolism; Fatty acid metabolism; Fatty acid elongation in mitochondria; Tryptophan metabolism; Caprolactam degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00106; PF13561; PF01370; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain;
pfam_id adh_short; adh_short_C2; Epimerase; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2.4e-55 score:186.3 best_domain_score:185.9 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:1.9e-42 score:144.6 best_domain_score:144.4 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:2.8e-06 score:26.2 best_domain_score:24.5 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:2.3e-14 score:52.9 best_domain_score:52.6 name:KR;
sprot_desc NADP-dependent 3-hydroxy acid dehydrogenase YdfG;
sprot_id sp|P69935|YDFG_SALTI;
sprot_target db:uniprot_sprot|sp|P69935|YDFG_SALTI 10 254 evalue:1.4e-59 qcov:95.30 identity:51.40;
88480 89244 CDS
ID metaerg.pl|04889
allgo_ids GO:0015979; GO:0030089;
allko_ids K02290;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106921452.1 1 251 evalue:8.1e-122 qcov:98.80 identity:85.70;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00427;
pfam_desc Phycobilisome Linker polypeptide;
pfam_id PBS_linker_poly;
pfam_target db:Pfam-A.hmm|PF00427.21 evalue:8.1e-44 score:147.9 best_domain_score:147.5 name:PBS_linker_poly;
sprot_desc Phycobilisome rod-core linker polypeptide CpcG;
sprot_id sp|Q05238|PYG1_SYNP2;
sprot_target db:uniprot_sprot|sp|Q05238|PYG1_SYNP2 1 249 evalue:1.7e-86 qcov:98.00 identity:61.80;
90794 89556 CDS
ID metaerg.pl|04890
allec_ids 3.2.2.31; 3.6.1.-;
allgo_ids GO:0003677; GO:0051539; GO:0019104; GO:0046872; GO:0006284;
allko_ids K03660; K10801; K03207; K08310; K01515; K00788; K12944; K10773; K01529; K03575; K08320; K03574; K08311;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017298566.1 41 409 evalue:9.6e-181 qcov:89.60 identity:80.20;
kegg_pathway_id 03410; 00790; 00230; 00730;
kegg_pathway_name Base excision repair; Folate biosynthesis; Purine metabolism; Thiamine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
metacyc_pathway_id PWY-6404; PWY-5354; PWY-6502; PWY-6147; ALL-CHORISMATE-PWY; FOLSYN-PWY; PWY-6383;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ; oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; superpathway of chorismate metabolism;; superpathway of tetrahydrofolate biosynthesis and salvage;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; ; Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;; Super-Pathways;; Folate-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;;
pfam_acc PF00633; PF00730; PF00293; PF14815;
pfam_desc Helix-hairpin-helix motif; HhH-GPD superfamily base excision DNA repair protein; NUDIX domain; NUDIX domain;
pfam_id HHH; HhH-GPD; NUDIX; NUDIX_4;
pfam_target db:Pfam-A.hmm|PF00633.23 evalue:4.9e-06 score:25.4 best_domain_score:24.6 name:HHH; db:Pfam-A.hmm|PF00730.25 evalue:4.2e-17 score:61.8 best_domain_score:61.2 name:HhH-GPD; db:Pfam-A.hmm|PF00293.28 evalue:8.9e-17 score:60.6 best_domain_score:59.9 name:NUDIX; db:Pfam-A.hmm|PF14815.6 evalue:1.3e-27 score:95.2 best_domain_score:93.9 name:NUDIX_4;
sprot_desc Adenine DNA glycosylase;
sprot_id sp|P83847|MUTY_GEOSE;
sprot_target db:uniprot_sprot|sp|P83847|MUTY_GEOSE 66 408 evalue:4.6e-65 qcov:83.30 identity:37.40;
tigrfam_acc TIGR00586; TIGR01084;
tigrfam_desc mutator mutT protein; A/G-specific adenine glycosylase;
tigrfam_mainrole DNA metabolism; DNA metabolism;
tigrfam_name mutt; mutY;
tigrfam_sub1role DNA replication, recombination, and repair; DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00586 evalue:1.9e-36 score:124.1 best_domain_score:123.4 name:TIGR00586; db:TIGRFAMs.hmm|TIGR01084 evalue:4.7e-102 score:340.4 best_domain_score:340.0 name:TIGR01084;
91174 90827 CDS
ID metaerg.pl|04891
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106873103.1 1 115 evalue:2.3e-47 qcov:100.00 identity:85.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF05542;
pfam_desc Protein of unknown function (DUF760);
pfam_id DUF760;
pfam_target db:Pfam-A.hmm|PF05542.11 evalue:8.5e-29 score:99.0 best_domain_score:98.8 name:DUF760;
91489 92766 CDS
ID metaerg.pl|04892
allec_ids 1.14.99.50;
allgo_ids GO:0005506; GO:0004497; GO:0016705; GO:0052699;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__PCC-6406;s__PCC-6406 sp000332095;
genomedb_acc GCF_000332095.2;
genomedb_target db:genomedb|GCF_000332095.2|WP_008308691.1 1 424 evalue:2.8e-199 qcov:99.80 identity:76.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF12867; PF03781;
pfam_desc DinB superfamily; Sulfatase-modifying factor enzyme 1;
pfam_id DinB_2; FGE-sulfatase;
pfam_target db:Pfam-A.hmm|PF12867.7 evalue:1.2e-09 score:38.0 best_domain_score:38.0 name:DinB_2; db:Pfam-A.hmm|PF03781.16 evalue:3.5e-35 score:121.1 best_domain_score:110.6 name:FGE-sulfatase;
sprot_desc Hercynine oxygenase;
sprot_id sp|G7CFI3|EGTB_MYCT3;
sprot_target db:uniprot_sprot|sp|G7CFI3|EGTB_MYCT3 46 424 evalue:1.3e-33 qcov:89.20 identity:30.30;
tigrfam_acc TIGR03440;
tigrfam_desc ergothioneine biosynthesis protein EgtB;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name egtB_TIGR03440;
tigrfam_sub1role Glutathione and analogs;
tigrfam_target db:TIGRFAMs.hmm|TIGR03440 evalue:4.8e-168 score:558.9 best_domain_score:558.7 name:TIGR03440;
92881 93858 CDS
ID metaerg.pl|04893
allec_ids 2.1.1.44;
allgo_ids GO:0030745; GO:0008276; GO:0052704; GO:0052707;
allko_ids K18911;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__PCC-6406;s__PCC-6406 sp000332095;
genomedb_acc GCF_000332095.2;
genomedb_target db:genomedb|GCF_000332095.2|WP_008308692.1 1 325 evalue:8.5e-148 qcov:100.00 identity:78.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF10017;
pfam_desc Histidine-specific methyltransferase, SAM-dependent;
pfam_id Methyltransf_33;
pfam_target db:Pfam-A.hmm|PF10017.9 evalue:1e-102 score:342.7 best_domain_score:342.5 name:Methyltransf_33;
sprot_desc Histidine N-alpha-methyltransferase;
sprot_id sp|A0R5M8|EGTD_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R5M8|EGTD_MYCS2 27 319 evalue:9.7e-50 qcov:90.20 identity:42.10;
tigrfam_acc TIGR03438;
tigrfam_desc dimethylhistidine N-methyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name egtD_ergothio;
tigrfam_sub1role Glutathione and analogs;
tigrfam_target db:TIGRFAMs.hmm|TIGR03438 evalue:1.5e-110 score:368.3 best_domain_score:368.1 name:TIGR03438;
93957 94790 CDS
ID metaerg.pl|04894
allec_ids 4.1.3.36;
allgo_ids GO:0003824; GO:0005829; GO:0008935; GO:0071890; GO:0009234;
allko_ids K13767; K15016; K01782; K07516; K00022; K01692; K07515; K01825; K10527; K07514; K01661;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035990964.1 1 277 evalue:1.1e-151 qcov:100.00 identity:93.90;
kegg_pathway_id 00062; 00903; 01040; 00410; 00592; 00130; 00071; 00650; 00640; 00281; 00280; 00310; 00380; 00632; 00930;
kegg_pathway_name Fatty acid elongation in mitochondria; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; beta-Alanine metabolism; alpha-Linolenic acid metabolism; Ubiquinone biosynthesis; Fatty acid metabolism; Butanoate metabolism; Propanoate metabolism; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; Tryptophan metabolism; Benzoate degradation via CoA ligation; Caprolactam degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
metacyc_pathway_id PWY-5840; PWY-5837; PWY-5897; ALL-CHORISMATE-PWY; PWY-5860; PWY-5791; PWY-5896; PWY-5845; PWY-5862; PWY-5863; PWY-5899; PWY-5850; PWY-5861; PWY-5838; PWY-5898;
metacyc_pathway_name superpathway of menaquinol-7 biosynthesis;; 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of menaquinol-11 biosynthesis;; superpathway of chorismate metabolism;; superpathway of demethylmenaquinol-6 biosynthesis I;; ; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-6 biosynthesis I;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-8 biosynthesis I;; superpathway of menaquinol-12 biosynthesis;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; DHNA-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Super-Pathways;; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; ; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:1.5e-76 score:256.3 best_domain_score:256.0 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:1.4e-18 score:66.7 best_domain_score:66.3 name:ECH_2;
sprot_desc 1,4-dihydroxy-2-naphthoyl-CoA synthase;
sprot_id sp|P23966|MENB_BACSU;
sprot_target db:uniprot_sprot|sp|P23966|MENB_BACSU 5 277 evalue:7.4e-107 qcov:98.60 identity:67.80;
tigrfam_acc TIGR01929;
tigrfam_desc naphthoate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name menB;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR01929 evalue:1.6e-133 score:443.2 best_domain_score:443.1 name:TIGR01929;
95176 96453 CDS
ID metaerg.pl|04895
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035985691.1 1 425 evalue:3.2e-155 qcov:100.00 identity:63.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:1.6e-14 score:54.1 best_domain_score:53.7 name:Metallophos;
sp YES;
tm_num 1;
95176 95238 lipoprotein_signal_peptide
ID metaerg.pl|04896
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
95176 96453 transmembrane_helix
ID metaerg.pl|04897
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology i95194-95262o;
99071 97410 CDS
ID metaerg.pl|04898
allec_ids 3.1.1.84;
allgo_ids GO:0016787; GO:0005737; GO:0052689; GO:0008239; GO:0050784;
allko_ids K21017;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZU95764.1 26 547 evalue:1.5e-216 qcov:94.40 identity:68.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF02129; PF08530;
pfam_desc X-Pro dipeptidyl-peptidase (S15 family); X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain;
pfam_id Peptidase_S15; PepX_C;
pfam_target db:Pfam-A.hmm|PF02129.18 evalue:8.9e-67 score:224.7 best_domain_score:224.4 name:Peptidase_S15; db:Pfam-A.hmm|PF08530.10 evalue:1.8e-25 score:89.5 best_domain_score:87.7 name:PepX_C;
sprot_desc Cocaine esterase;
sprot_id sp|Q9L9D7|COCE_RHOSM;
sprot_target db:uniprot_sprot|sp|Q9L9D7|COCE_RHOSM 24 517 evalue:1.3e-59 qcov:89.30 identity:31.70;
tigrfam_acc TIGR00976;
tigrfam_desc hydrolase CocE/NonD family protein;
tigrfam_mainrole Unknown function;
tigrfam_name /NonD;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00976 evalue:1.6e-131 score:439.2 best_domain_score:438.9 name:TIGR00976;
99313 99531 CDS
ID metaerg.pl|04899
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106920903.1 1 63 evalue:1.9e-20 qcov:87.50 identity:85.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF04485;
pfam_desc Phycobilisome degradation protein nblA;
pfam_id NblA;
pfam_target db:Pfam-A.hmm|PF04485.12 evalue:4.1e-16 score:58.3 best_domain_score:58.2 name:NblA;
99644 100312 CDS
ID metaerg.pl|04900
allec_ids 1.14.99.63;
allgo_ids GO:0006629; GO:0016491; GO:0016117;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_081972522.1 1 222 evalue:1.0e-96 qcov:100.00 identity:73.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00487;
pfam_desc Fatty acid desaturase;
pfam_id FA_desaturase;
pfam_target db:Pfam-A.hmm|PF00487.24 evalue:1.6e-24 score:86.3 best_domain_score:46.9 name:FA_desaturase;
sprot_desc Beta-carotene ketolase;
sprot_id sp|P54972|CRTW_PARSN;
sprot_target db:uniprot_sprot|sp|P54972|CRTW_PARSN 30 220 evalue:7.9e-27 qcov:86.00 identity:35.80;
tm_num 4;
99644 100312 transmembrane_helix
ID metaerg.pl|04901
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology o99701-99760i99995-100063o100073-100141i100178-100237o;
100967 100581 CDS
ID metaerg.pl|04902
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
101069 103471 CDS
ID metaerg.pl|04903
allgo_ids GO:0000160; GO:0003677; GO:0006355;
allko_ids K11356; K11640; K02484; K00760; K07642; K11711; K02491; K13490; K11231; K07704; K10909; K01937; K08282; K07708; K07645; K07677; K07652; K07641; K07646; K08475; K07639; K07673; K01120; K03407; K07637; K07654; K07682; K00936; K07777; K07651; K07718; K07679; K02478; K07648; K07711; K00873; K08884; K07778; K07683; K11354; K07768; K02575; K07644; K07709; K07650; K06379; K07676; K10681; K01769; K07675; K07717; K07647; K10942; K04757; K10125; K11357; K12767; K11383; K13761; K02486; K07769; K07640; K07710; K01768; K02489; K07716; K08479; K07674; K10916; K02668; K03388; K10715; K07678; K11527; K02030; K02026; K07638; K07653; K07636; K02482; K14489; K02480;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae_A;g__Phormidium;s__Phormidium ambiguum;
genomedb_acc GCF_001904725.1;
genomedb_target db:genomedb|GCF_001904725.1|WP_073594413.1 1 800 evalue:1.2e-190 qcov:100.00 identity:45.80;
kegg_pathway_id 00240; 05111; 00230; 00983; 00010; 00710; 00790; 03090; 00620; 04011; 02020;
kegg_pathway_name Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Drug metabolism - other enzymes; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Folate biosynthesis; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00990; PF01627; PF00072; PF00486;
pfam_desc Diguanylate cyclase, GGDEF domain; Hpt domain; Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id GGDEF; Hpt; Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:4.3e-52 score:175.4 best_domain_score:174.3 name:GGDEF; db:Pfam-A.hmm|PF01627.23 evalue:2.4e-08 score:33.4 best_domain_score:33.4 name:Hpt; db:Pfam-A.hmm|PF00072.24 evalue:1.6e-59 score:198.1 best_domain_score:96.4 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:1.5e-18 score:65.8 best_domain_score:64.4 name:Trans_reg_C;
sprot_desc hypothetical protein;
sprot_id sp|Q01473|RCAC_MICDP;
sprot_target db:uniprot_sprot|sp|Q01473|RCAC_MICDP 1 613 evalue:7.8e-101 qcov:76.60 identity:36.00;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:5.8e-49 score:165.2 best_domain_score:164.6 name:TIGR00254;
103504 106635 CDS
ID metaerg.pl|04904
allgo_ids GO:0007165; GO:0016021;
allko_ids K07637; K03407; K07777; K00936; K07649; K07682; K07654; K07652; K07673; K01120; K08475; K07639; K07646; K07641; K13598; K11328; K13533; K08884; K00873; K07711; K07768; K11633; K02575; K11354; K07683; K07778; K07698; K07718; K11623; K07651; K07648; K02478; K07679; K07642; K11711; K11640; K04486; K11356; K02484; K08282; K07704; K10909; K07708; K07677; K07645; K01090; K02491; K11231; K07643; K10916; K08479; K07674; K03388; K02668; K01768; K07656; K07710; K07640; K07716; K07697; K02489; K07636; K07638; K07653; K02480; K14489; K08801; K02482; K07655; K07678; K10715; K13587; K11527; K02030; K07676; K10681; K06379; K07650; K01769; K07644; K13532; K07709; K11357; K11629; K02342; K10125; K04757; K11617; K11520; K14509; K07769; K02486; K11383; K12767; K07717; K07675; K10942; K13040; K07647; K07680;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira diplosiphon;
genomedb_acc GCF_002368275.1;
genomedb_target db:genomedb|GCF_002368275.1|WP_045873159.1 8 1042 evalue:5.9e-243 qcov:99.20 identity:42.70;
kegg_pathway_id 03090; 00620; 04011; 02020; 00340; 00790; 00010; 00710; 03030; 00230; 05111;
kegg_pathway_name Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Histidine metabolism; Folate biosynthesis; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; DNA replication; Purine metabolism; Vibrio cholerae pathogenic cycle;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF02743; PF00672; PF02518; PF00512; PF00989; PF08447; PF08448; PF13188; PF13426;
pfam_desc Cache domain; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain;
pfam_id dCache_1; HAMP; HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_8; PAS_9;
pfam_target db:Pfam-A.hmm|PF02743.18 evalue:6.3e-20 score:71.2 best_domain_score:69.2 name:dCache_1; db:Pfam-A.hmm|PF00672.25 evalue:3.4e-07 score:29.8 best_domain_score:28.6 name:HAMP; db:Pfam-A.hmm|PF02518.26 evalue:4.3e-29 score:100.5 best_domain_score:96.2 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:4.9e-16 score:57.8 best_domain_score:56.4 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:7e-19 score:67.1 best_domain_score:40.3 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:3.1e-19 score:68.3 best_domain_score:58.8 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:9.9e-13 score:47.5 best_domain_score:21.6 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:2.1e-12 score:46.0 best_domain_score:25.6 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:8.8e-21 score:73.4 best_domain_score:41.7 name:PAS_9;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:3.8e-55 score:184.6 best_domain_score:112.5 name:TIGR00229;
tm_num 2;
103504 106635 transmembrane_helix
ID metaerg.pl|04905
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
topology o103561-103629i104572-104631o;
106769 107146 CDS
ID metaerg.pl|04906
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0009405; GO:0006355;
allko_ids K11711; K07642; K02484; K11356; K11640; K07645; K07708; K07677; K08282; K11231; K07654; K07682; K03407; K07637; K07646; K07641; K07673; K01120; K08475; K07639; K07652; K11354; K07778; K07768; K07711; K07679; K07648; K07651; K10681; K07676; K06379; K07709; K07644; K02486; K11383; K12767; K04757; K11357; K10125; K07647; K07717; K07675; K02668; K03388; K08479; K10916; K02489; K07716; K07710; K02482; K02480; K07653; K07636; K11527; K07678; K10715; K07669;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Elainellales;f__Elainellaceae;g__Leptolyngbya_A;s__Leptolyngbya_A ohadii;
genomedb_acc GCF_002215035.1;
genomedb_target db:genomedb|GCF_002215035.1|WP_088889604.1 1 124 evalue:3.7e-43 qcov:99.20 identity:70.20;
kegg_pathway_id 05111; 00230; 00790; 02020; 04011; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Folate biosynthesis; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 889.325; 325.549; 14.0222; 585.164; 1814.06;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:7.1e-24 score:83.4 best_domain_score:83.2 name:Response_reg;
sprot_desc Response regulator MprA;
sprot_id sp|A1TEL7|MPRA_MYCVP;
sprot_target db:uniprot_sprot|sp|A1TEL7|MPRA_MYCVP 1 121 evalue:7.6e-11 qcov:96.80 identity:34.70;
>Feature NODE_29_length_107521_cov_10.6151
3318 1 CDS
ID metaerg.pl|04907
allko_ids K01179; K01183; K01448; K01225; K01181; K03332; K01728; K00689; K01200;
kegg_pathway_id 00051; 02020; 00550; 00530; 00040; 00500;
kegg_pathway_name Fructose and mannose metabolism; Two-component system - General; Peptidoglycan biosynthesis; Aminosugars metabolism; Pentose and glucuronate interconversions; Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF02368; PF13620; PF00801; PF00395;
pfam_desc Bacterial Ig-like domain (group 2); Carboxypeptidase regulatory-like domain; PKD domain; S-layer homology domain;
pfam_id Big_2; CarboxypepD_reg; PKD; SLH;
pfam_target db:Pfam-A.hmm|PF02368.18 evalue:3.1e-08 score:32.6 best_domain_score:32.6 name:Big_2; db:Pfam-A.hmm|PF13620.6 evalue:2.7e-08 score:33.2 best_domain_score:29.4 name:CarboxypepD_reg; db:Pfam-A.hmm|PF00801.20 evalue:4.4e-10 score:38.5 best_domain_score:38.5 name:PKD; db:Pfam-A.hmm|PF00395.20 evalue:1.1e-23 score:82.2 best_domain_score:36.1 name:SLH;
sp YES;
tm_num 1;
1 117 signal_peptide
ID metaerg.pl|04908
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
3318 1 transmembrane_helix
ID metaerg.pl|04909
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i49-117o;
6421 3482 CDS
ID metaerg.pl|04910
allgo_ids GO:0000160; GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora;s__Spirillospora sp002911665;
genomedb_acc GCF_002911665.1;
genomedb_target db:genomedb|GCF_002911665.1|WP_103565881.1 24 881 evalue:7.2e-142 qcov:87.60 identity:41.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF03704; PF13424; PF00486;
pfam_desc Bacterial transcriptional activator domain; Tetratricopeptide repeat; Transcriptional regulatory protein, C terminal;
pfam_id BTAD; TPR_12; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF03704.17 evalue:4.3e-38 score:130.3 best_domain_score:130.3 name:BTAD; db:Pfam-A.hmm|PF13424.6 evalue:1.3e-08 score:34.2 best_domain_score:22.0 name:TPR_12; db:Pfam-A.hmm|PF00486.28 evalue:2e-14 score:52.7 best_domain_score:51.8 name:Trans_reg_C;
6730 7317 CDS
ID metaerg.pl|04911
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665119.1 1 195 evalue:5.1e-39 qcov:100.00 identity:46.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
7318 7959 CDS
ID metaerg.pl|04912
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441249.1 1 213 evalue:1.7e-56 qcov:100.00 identity:54.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF08808;
pfam_desc RES domain;
pfam_id RES;
pfam_target db:Pfam-A.hmm|PF08808.11 evalue:3.1e-13 score:49.1 best_domain_score:48.8 name:RES;
8478 7963 CDS
ID metaerg.pl|04913
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
8704 8970 CDS
ID metaerg.pl|04914
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
9298 9921 CDS
ID metaerg.pl|04915
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
10063 10431 CDS
ID metaerg.pl|04916
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
10614 11594 CDS
ID metaerg.pl|04917
genomedb_OC d__Bacteria;p__Dormibacterota;c__Dormibacteria;o__UBA8260;f__UBA8260;g__Palsa-851;s__Palsa-851 sp003131685;
genomedb_acc GCA_003131685.1;
genomedb_target db:genomedb|GCA_003131685.1|PKWB01000110.1_1 9 324 evalue:4.3e-35 qcov:96.90 identity:35.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF00990;
pfam_desc Diguanylate cyclase, GGDEF domain;
pfam_id GGDEF;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:1.8e-33 score:114.8 best_domain_score:113.9 name:GGDEF;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:7e-34 score:116.1 best_domain_score:114.3 name:TIGR00254;
tm_num 4;
10614 11594 transmembrane_helix
ID metaerg.pl|04918
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i10671-10724o10734-10802i10821-10889o10902-10970i;
11728 11943 CDS
ID metaerg.pl|04919
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
tm_num 1;
11728 11943 transmembrane_helix
ID metaerg.pl|04920
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology o11740-11808i;
11984 12613 CDS
ID metaerg.pl|04921
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF03235;
pfam_desc Protein of unknown function DUF262;
pfam_id DUF262;
pfam_target db:Pfam-A.hmm|PF03235.14 evalue:2.8e-14 score:53.1 best_domain_score:52.8 name:DUF262;
13040 13306 CDS
ID metaerg.pl|04922
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
13355 14425 CDS
ID metaerg.pl|04923
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
14422 14748 CDS
ID metaerg.pl|04924
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
14802 15284 CDS
ID metaerg.pl|04925
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp002257455;
genomedb_acc GCA_002257455.1;
genomedb_target db:genomedb|GCA_002257455.1|OZB84383.1 25 146 evalue:1.3e-27 qcov:76.20 identity:54.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
15350 16087 CDS
ID metaerg.pl|04926
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
16429 16133 CDS
ID metaerg.pl|04927
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
tm_num 2;
16429 16133 transmembrane_helix
ID metaerg.pl|04928
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i16229-16297o16340-16408i;
17112 16588 CDS
ID metaerg.pl|04929
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
17797 17522 CDS
ID metaerg.pl|04930
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Defluviicoccales;f__Defluviicoccaceae;g__Defluviicoccus;s__Defluviicoccus sp002239065;
genomedb_acc GCA_002239065.1;
genomedb_target db:genomedb|GCA_002239065.1|MPNO01000116.1_3 5 91 evalue:5.8e-22 qcov:95.60 identity:57.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
18827 18192 CDS
ID metaerg.pl|04931
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__UBA3071;f__CG2-30-64-16;g__CG2-30-64-16;s__CG2-30-64-16 sp002842085;
genomedb_acc GCA_002842085.1;
genomedb_target db:genomedb|GCA_002842085.1|PKO21508.1 10 205 evalue:1.6e-14 qcov:92.90 identity:32.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF01503;
pfam_desc Phosphoribosyl-ATP pyrophosphohydrolase;
pfam_id PRA-PH;
pfam_target db:Pfam-A.hmm|PF01503.17 evalue:2.5e-17 score:62.3 best_domain_score:51.5 name:PRA-PH;
19369 18929 CDS
ID metaerg.pl|04932
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
20476 19700 CDS
ID metaerg.pl|04933
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441148.1 9 206 evalue:1.1e-25 qcov:76.70 identity:45.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF00188;
pfam_desc Cysteine-rich secretory protein family;
pfam_id CAP;
pfam_target db:Pfam-A.hmm|PF00188.26 evalue:6.3e-12 score:45.7 best_domain_score:45.2 name:CAP;
sp YES;
tm_num 1;
19700 19795 signal_peptide
ID metaerg.pl|04934
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
20476 19700 transmembrane_helix
ID metaerg.pl|04935
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i19724-19792o;
20603 21079 CDS
ID metaerg.pl|04936
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
22182 21265 CDS
ID metaerg.pl|04937
casgene_acc cd09637_cas4_CAS-I:CAS-II:CAS-V; pfam01930_cas4_CAS-I;
casgene_name cas4; cas4;
casgene_target db:casgenes.hmm|cd09637_cas4_CAS-I:CAS-II:CAS-V evalue:6.3e-13 score:48.5 best_domain_score:37.6 name:cas4; db:casgenes.hmm|pfam01930_cas4_CAS-I evalue:1e-08 score:34.7 best_domain_score:31.0 name:cas4;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__QS-5-72-10;g__QS-5-72-10;s__QS-5-72-10 sp003021615;
genomedb_acc GCA_003021615.1;
genomedb_target db:genomedb|GCA_003021615.1|PSO47419.1 43 302 evalue:4.4e-74 qcov:85.20 identity:56.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF01930; PF10926; PF12705;
pfam_desc Domain of unknown function DUF83; Protein of unknown function (DUF2800); PD-(D/E)XK nuclease superfamily;
pfam_id Cas_Cas4; DUF2800; PDDEXK_1;
pfam_target db:Pfam-A.hmm|PF01930.17 evalue:2.1e-07 score:30.4 best_domain_score:26.8 name:Cas_Cas4; db:Pfam-A.hmm|PF10926.8 evalue:7.6e-06 score:24.6 best_domain_score:24.6 name:DUF2800; db:Pfam-A.hmm|PF12705.7 evalue:2.6e-38 score:131.6 best_domain_score:131.3 name:PDDEXK_1;
22294 24225 CDS
ID metaerg.pl|04938
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
24361 25005 CDS
ID metaerg.pl|04939
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
27072 25147 CDS
ID metaerg.pl|04940
allgo_ids GO:0004252; GO:0006508;
allko_ids K01179; K01183; K01448; K01225; K01181;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441768.1 8 574 evalue:1.4e-74 qcov:88.50 identity:36.80;
kegg_pathway_id 00550; 00500; 00530;
kegg_pathway_name Peptidoglycan biosynthesis; Starch and sucrose metabolism; Aminosugars metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF00082; PF00395;
pfam_desc Subtilase family; S-layer homology domain;
pfam_id Peptidase_S8; SLH;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:7.5e-25 score:87.0 best_domain_score:84.9 name:Peptidase_S8; db:Pfam-A.hmm|PF00395.20 evalue:3.4e-18 score:64.6 best_domain_score:24.2 name:SLH;
sp YES;
25147 25215 signal_peptide
ID metaerg.pl|04941
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
28203 27247 CDS
ID metaerg.pl|04942
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
sp YES;
tm_num 1;
27247 27324 signal_peptide
ID metaerg.pl|04943
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
28203 27247 transmembrane_helix
ID metaerg.pl|04944
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i27958-28026o;
29100 28297 CDS
ID metaerg.pl|04945
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF01816;
pfam_desc Leucine rich repeat variant;
pfam_id LRV;
pfam_target db:Pfam-A.hmm|PF01816.17 evalue:2.1e-05 score:23.9 best_domain_score:11.9 name:LRV;
29285 29097 CDS
ID metaerg.pl|04946
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
29708 29436 CDS
ID metaerg.pl|04947
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
29854 30240 CDS
ID metaerg.pl|04948
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__CAG-382;g__UCG-010;s__UCG-010 sp003150115;
genomedb_acc GCA_003150115.1;
genomedb_target db:genomedb|GCA_003150115.1|PWM26918.1 16 121 evalue:3.1e-13 qcov:82.80 identity:37.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
30667 31908 CDS
ID metaerg.pl|04949
allko_ids K08217;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora lupini;
genomedb_acc GCF_000297395.2;
genomedb_target db:genomedb|GCF_000297395.2|WP_007465358.1 22 393 evalue:1.3e-57 qcov:90.10 identity:44.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
tm_num 12;
30667 31908 transmembrane_helix
ID metaerg.pl|04950
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i30763-30831o30859-30927i30946-31014o31024-31092i31153-31206o31216-31284i31363-31431o31444-31503i31540-31608o31618-31686i31723-31791o31804-31872i;
32011 32748 CDS
ID metaerg.pl|04951
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
32687 33133 CDS
ID metaerg.pl|04952
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
33261 34766 CDS
ID metaerg.pl|04953
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
tm_num 2;
33261 34766 transmembrane_helix
ID metaerg.pl|04954
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology o33312-33380i33399-33467o;
34938 36398 CDS
ID metaerg.pl|04955
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
36644 37000 CDS
ID metaerg.pl|04956
allko_ids K07636; K07653; K07642; K03407; K07654; K07641; K07646;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
37083 37427 CDS
ID metaerg.pl|04957
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
37649 38740 CDS
ID metaerg.pl|04958
allko_ids K01181; K01179; K01183; K01448; K01225;
kegg_pathway_id 00550; 00530; 00500;
kegg_pathway_name Peptidoglycan biosynthesis; Aminosugars metabolism; Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF08305; PF00395;
pfam_desc NPCBM/NEW2 domain; S-layer homology domain;
pfam_id NPCBM; SLH;
pfam_target db:Pfam-A.hmm|PF08305.11 evalue:2.9e-15 score:55.9 best_domain_score:55.3 name:NPCBM; db:Pfam-A.hmm|PF00395.20 evalue:4.6e-20 score:70.6 best_domain_score:36.5 name:SLH;
sp YES;
37649 37729 signal_peptide
ID metaerg.pl|04959
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
39420 38890 CDS
ID metaerg.pl|04960
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
tm_num 1;
39420 38890 transmembrane_helix
ID metaerg.pl|04961
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i38980-39048o;
39958 39560 CDS
ID metaerg.pl|04962
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
40403 40089 CDS
ID metaerg.pl|04963
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
sp YES;
40089 40235 signal_peptide
ID metaerg.pl|04964
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
41171 40542 CDS
ID metaerg.pl|04965
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
41487 41227 CDS
ID metaerg.pl|04966
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
41782 41570 CDS
ID metaerg.pl|04967
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
42452 41862 CDS
ID metaerg.pl|04968
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
42765 42493 CDS
ID metaerg.pl|04969
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
44287 42893 CDS
ID metaerg.pl|04970
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
45235 44363 CDS
ID metaerg.pl|04971
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
45844 45470 CDS
ID metaerg.pl|04972
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
46139 48103 CDS
ID metaerg.pl|04973
allgo_ids GO:0005515;
allko_ids K08809;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Glaciihabitans;s__Glaciihabitans tibetensis;
genomedb_acc GCF_003003265.1;
genomedb_target db:genomedb|GCF_003003265.1|WP_106212356.1 163 649 evalue:3.0e-67 qcov:74.50 identity:39.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF00041; PF00415; PF13540;
pfam_desc Fibronectin type III domain; Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation (RCC1) repeat;
pfam_id fn3; RCC1; RCC1_2;
pfam_target db:Pfam-A.hmm|PF00041.21 evalue:2.9e-07 score:30.0 best_domain_score:27.9 name:fn3; db:Pfam-A.hmm|PF00415.18 evalue:1.6e-59 score:197.6 best_domain_score:42.3 name:RCC1; db:Pfam-A.hmm|PF13540.6 evalue:6e-23 score:79.3 best_domain_score:21.8 name:RCC1_2;
sp YES;
46139 46315 signal_peptide
ID metaerg.pl|04974
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
49110 48259 CDS
ID metaerg.pl|04975
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
49837 49178 CDS
ID metaerg.pl|04976
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
50136 49834 CDS
ID metaerg.pl|04977
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
50590 50303 CDS
ID metaerg.pl|04978
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptacidiphilus;s__Streptacidiphilus jiangxiensis;
genomedb_acc GCF_900109465.1;
genomedb_target db:genomedb|GCF_900109465.1|WP_042449680.1 10 94 evalue:7.0e-10 qcov:89.50 identity:40.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
50829 51863 CDS
ID metaerg.pl|04979
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
51964 52251 CDS
ID metaerg.pl|04980
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
53009 52365 CDS
ID metaerg.pl|04981
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
53912 53073 CDS
ID metaerg.pl|04982
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
53914 54213 CDS
ID metaerg.pl|04983
allgo_ids GO:0003677; GO:0004803; GO:0006313;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora cremea;
genomedb_acc GCF_900143515.1;
genomedb_target db:genomedb|GCF_900143515.1|WP_074311792.1 1 99 evalue:1.1e-16 qcov:100.00 identity:52.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF01527;
pfam_desc Transposase;
pfam_id HTH_Tnp_1;
pfam_target db:Pfam-A.hmm|PF01527.20 evalue:1.2e-14 score:53.6 best_domain_score:53.1 name:HTH_Tnp_1;
sprot_desc Insertion element IS6110 uncharacterized 12.0 kDa protein;
sprot_id sp|P59801|YIA4_MYCBO;
sprot_target db:uniprot_sprot|sp|P59801|YIA4_MYCBO 5 98 evalue:4.8e-08 qcov:94.90 identity:44.10;
54210 55118 CDS
ID metaerg.pl|04984
allgo_ids GO:0015074; GO:0003677; GO:0006310; GO:0032196;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__UBA2241;f__UBA2241;g__FEN-672;s__FEN-672 sp003158705;
genomedb_acc GCA_003158705.1;
genomedb_target db:genomedb|GCA_003158705.1|PMKX01000082.1_3 1 290 evalue:1.9e-93 qcov:96.00 identity:61.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF13276; PF00665; PF13333; PF13683;
pfam_desc HTH-like domain; Integrase core domain; Integrase core domain; Integrase core domain;
pfam_id HTH_21; rve; rve_2; rve_3;
pfam_target db:Pfam-A.hmm|PF13276.6 evalue:2.1e-18 score:65.4 best_domain_score:64.5 name:HTH_21; db:Pfam-A.hmm|PF00665.26 evalue:8.5e-25 score:86.5 best_domain_score:85.4 name:rve; db:Pfam-A.hmm|PF13333.6 evalue:6.6e-10 score:38.3 best_domain_score:37.1 name:rve_2; db:Pfam-A.hmm|PF13683.6 evalue:1.2e-13 score:49.8 best_domain_score:46.1 name:rve_3;
sprot_desc Putative transposase for insertion sequence element IS986/IS6110;
sprot_id sp|P59800|TRA9_MYCBO;
sprot_target db:uniprot_sprot|sp|P59800|TRA9_MYCBO 26 297 evalue:7.1e-71 qcov:90.10 identity:51.60;
55798 55424 CDS
ID metaerg.pl|04985
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
sp YES;
tm_num 1;
55424 55498 signal_peptide
ID metaerg.pl|04986
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
55798 55424 transmembrane_helix
ID metaerg.pl|04987
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology o55436-55504i;
57550 56045 CDS
ID metaerg.pl|04988
allko_ids K01999;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441296.1 42 501 evalue:1.3e-123 qcov:91.80 identity:56.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF01094; PF10708; PF13433; PF13458;
pfam_desc Receptor family ligand binding region; Protein of unknown function (DUF2510); Periplasmic binding protein domain; Periplasmic binding protein;
pfam_id ANF_receptor; DUF2510; Peripla_BP_5; Peripla_BP_6;
pfam_target db:Pfam-A.hmm|PF01094.28 evalue:1.1e-22 score:79.8 best_domain_score:79.2 name:ANF_receptor; db:Pfam-A.hmm|PF10708.9 evalue:1.3e-09 score:36.8 best_domain_score:36.3 name:DUF2510; db:Pfam-A.hmm|PF13433.6 evalue:3.9e-13 score:48.3 best_domain_score:47.2 name:Peripla_BP_5; db:Pfam-A.hmm|PF13458.6 evalue:1.6e-38 score:132.5 best_domain_score:131.9 name:Peripla_BP_6;
tm_num 1;
57550 56045 transmembrane_helix
ID metaerg.pl|04989
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i56198-56266o;
57987 57697 CDS
ID metaerg.pl|04990
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
59403 58078 CDS
ID metaerg.pl|04991
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF07963;
pfam_desc Prokaryotic N-terminal methylation motif;
pfam_id N_methyl;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:4.3e-07 score:28.5 best_domain_score:27.7 name:N_methyl;
sp YES;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:2.8e-06 score:26.1 best_domain_score:25.3 name:TIGR02532;
tm_num 1;
58078 58194 signal_peptide
ID metaerg.pl|04992
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
59403 58078 transmembrane_helix
ID metaerg.pl|04993
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i58114-58182o;
61264 59504 CDS
ID metaerg.pl|04994
allgo_ids GO:0005524;
genomedb_OC d__Viruses;no__dsDNA viruses, no RNA stage;o__Caudovirales;f__Myoviridae;g__Arv1virus;s__Arthrobacter virus ArV1;;
genomedb_acc GCF_000954695.1;
genomedb_target db:genomedb|GCF_000954695.1|YP_009126110.1 2 573 evalue:1.9e-166 qcov:97.60 identity:53.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF00176;
pfam_desc SNF2 family N-terminal domain;
pfam_id SNF2_N;
pfam_target db:Pfam-A.hmm|PF00176.23 evalue:5e-12 score:44.4 best_domain_score:43.8 name:SNF2_N;
61647 61261 CDS
ID metaerg.pl|04995
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Actinopolymorphaceae;g__Actinopolymorpha;s__Actinopolymorpha cephalotaxi;
genomedb_acc GCF_900113145.1;
genomedb_target db:genomedb|GCF_900113145.1|WP_092888220.1 22 125 evalue:2.4e-13 qcov:81.20 identity:46.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
61786 62547 CDS
ID metaerg.pl|04996
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
tm_num 2;
61786 62547 transmembrane_helix
ID metaerg.pl|04997
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i62326-62394o62461-62529i;
65152 62855 CDS
ID metaerg.pl|04998
allgo_ids GO:0004252; GO:0006508;
allko_ids K01181; K01179; K01183; K01448; K01225;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441162.1 1 761 evalue:1.2e-104 qcov:99.50 identity:37.10;
kegg_pathway_id 00550; 00500; 00530;
kegg_pathway_name Peptidoglycan biosynthesis; Starch and sucrose metabolism; Aminosugars metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF00082; PF00395;
pfam_desc Subtilase family; S-layer homology domain;
pfam_id Peptidase_S8; SLH;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:2.1e-40 score:138.1 best_domain_score:137.6 name:Peptidase_S8; db:Pfam-A.hmm|PF00395.20 evalue:4.2e-14 score:51.5 best_domain_score:23.9 name:SLH;
sp YES;
tm_num 1;
62855 62956 signal_peptide
ID metaerg.pl|04999
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
65152 62855 transmembrane_helix
ID metaerg.pl|05000
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i62888-62956o;
65583 65317 CDS
ID metaerg.pl|05001
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
65892 66542 CDS
ID metaerg.pl|05002
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
66643 66569 tRNA
ID metaerg.pl|05003
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
name tRNA_Asn_gtt;
66822 67349 CDS
ID metaerg.pl|05004
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
68433 67477 CDS
ID metaerg.pl|05005
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF03793;
pfam_desc PASTA domain;
pfam_id PASTA;
pfam_target db:Pfam-A.hmm|PF03793.19 evalue:7.4e-05 score:21.8 best_domain_score:20.6 name:PASTA;
sp YES;
67477 67656 signal_peptide
ID metaerg.pl|05006
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
68941 68639 CDS
ID metaerg.pl|05007
allgo_ids GO:0003700; GO:0006352; GO:0006355;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF04545;
pfam_desc Sigma-70, region 4;
pfam_id Sigma70_r4;
pfam_target db:Pfam-A.hmm|PF04545.16 evalue:6.1e-09 score:34.5 best_domain_score:34.2 name:Sigma70_r4;
69081 69005 tRNA
ID metaerg.pl|05008
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
name tRNA_Thr_tgt;
69371 69296 tRNA
ID metaerg.pl|05009
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
name tRNA_His_gtg;
69445 69373 tRNA
ID metaerg.pl|05010
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
name tRNA_Gln_ctg;
69630 69557 tRNA
ID metaerg.pl|05011
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
name tRNA_Trp_cca;
69753 69668 tRNA
ID metaerg.pl|05012
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
name tRNA_Ser_cag;
69853 69778 tRNA
ID metaerg.pl|05013
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
name tRNA_Pro_tgg;
69966 69894 tRNA
ID metaerg.pl|05014
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
name tRNA_Gln_ttg;
70578 70000 CDS
ID metaerg.pl|05015
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Promicromonospora;s__Promicromonospora sp003058225;
genomedb_acc GCF_003058225.1;
genomedb_target db:genomedb|GCF_003058225.1|WP_108494616.1 1 191 evalue:3.3e-43 qcov:99.50 identity:46.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF12850;
pfam_desc Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos_2;
pfam_target db:Pfam-A.hmm|PF12850.7 evalue:9.9e-09 score:34.8 best_domain_score:34.5 name:Metallophos_2;
70708 70634 tRNA
ID metaerg.pl|05016
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
name tRNA_Lys_ctt;
70803 70729 tRNA
ID metaerg.pl|05017
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
name tRNA_Arg_acg;
71775 71461 CDS
ID metaerg.pl|05018
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
72616 71978 CDS
ID metaerg.pl|05019
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
tm_num 4;
72616 71978 transmembrane_helix
ID metaerg.pl|05020
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i72218-72286o72344-72412i72470-72538o72548-72607i;
72920 74734 CDS
ID metaerg.pl|05021
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
74797 75069 CDS
ID metaerg.pl|05022
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
75392 75850 CDS
ID metaerg.pl|05023
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF10708;
pfam_desc Protein of unknown function (DUF2510);
pfam_id DUF2510;
pfam_target db:Pfam-A.hmm|PF10708.9 evalue:2e-10 score:39.5 best_domain_score:39.5 name:DUF2510;
tm_num 1;
75392 75850 transmembrane_helix
ID metaerg.pl|05024
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology o75581-75634i;
76070 75864 CDS
ID metaerg.pl|05025
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
76942 76100 CDS
ID metaerg.pl|05026
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
77559 77200 CDS
ID metaerg.pl|05027
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
tm_num 3;
77559 77200 transmembrane_helix
ID metaerg.pl|05028
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology o77242-77310i77371-77439o77449-77508i;
78009 79442 CDS
ID metaerg.pl|05029
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
79898 79512 CDS
ID metaerg.pl|05030
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
80423 80851 CDS
ID metaerg.pl|05031
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
tm_num 1;
80423 80851 transmembrane_helix
ID metaerg.pl|05032
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i80459-80527o;
82150 81227 CDS
ID metaerg.pl|05033
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
82298 82513 CDS
ID metaerg.pl|05034
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
82668 83036 CDS
ID metaerg.pl|05035
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
83178 83684 CDS
ID metaerg.pl|05036
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
sp YES;
83178 83252 signal_peptide
ID metaerg.pl|05037
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
83681 85189 CDS
ID metaerg.pl|05038
allgo_ids GO:0016788;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF05057; PF07819;
pfam_desc Putative serine esterase (DUF676); PGAP1-like protein;
pfam_id DUF676; PGAP1;
pfam_target db:Pfam-A.hmm|PF05057.14 evalue:2.8e-07 score:29.5 best_domain_score:29.0 name:DUF676; db:Pfam-A.hmm|PF07819.13 evalue:2.9e-07 score:29.7 best_domain_score:26.2 name:PGAP1;
sp YES;
83681 83782 signal_peptide
ID metaerg.pl|05039
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
85334 86953 CDS
ID metaerg.pl|05040
allgo_ids GO:0016788;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF05057; PF07819;
pfam_desc Putative serine esterase (DUF676); PGAP1-like protein;
pfam_id DUF676; PGAP1;
pfam_target db:Pfam-A.hmm|PF05057.14 evalue:3.3e-05 score:22.7 best_domain_score:22.1 name:DUF676; db:Pfam-A.hmm|PF07819.13 evalue:1.7e-08 score:33.7 best_domain_score:29.7 name:PGAP1;
sp YES;
85334 85429 signal_peptide
ID metaerg.pl|05041
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
89279 86979 CDS
ID metaerg.pl|05042
allgo_ids GO:0004252; GO:0006508;
allko_ids K01179; K01183; K01448; K01225; K01181;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441162.1 1 765 evalue:2.0e-99 qcov:99.90 identity:35.90;
kegg_pathway_id 00550; 00530; 00500;
kegg_pathway_name Peptidoglycan biosynthesis; Aminosugars metabolism; Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF00082; PF00395;
pfam_desc Subtilase family; S-layer homology domain;
pfam_id Peptidase_S8; SLH;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:1.2e-32 score:112.7 best_domain_score:111.8 name:Peptidase_S8; db:Pfam-A.hmm|PF00395.20 evalue:7.1e-16 score:57.2 best_domain_score:21.3 name:SLH;
sp YES;
tm_num 1;
86979 87071 signal_peptide
ID metaerg.pl|05043
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
89279 86979 transmembrane_helix
ID metaerg.pl|05044
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i87012-87080o;
89876 89421 CDS
ID metaerg.pl|05045
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
90341 90051 CDS
ID metaerg.pl|05046
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
90509 91012 CDS
ID metaerg.pl|05047
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp002551245;
genomedb_acc GCF_002551245.1;
genomedb_target db:genomedb|GCF_002551245.1|WP_097868683.1 8 165 evalue:2.2e-19 qcov:94.60 identity:32.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
91407 91030 CDS
ID metaerg.pl|05048
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
91733 91512 CDS
ID metaerg.pl|05049
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF03793;
pfam_desc PASTA domain;
pfam_id PASTA;
pfam_target db:Pfam-A.hmm|PF03793.19 evalue:2.3e-06 score:26.6 best_domain_score:25.3 name:PASTA;
91938 91844 tRNA
ID metaerg.pl|05050
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
name tRNA_Pro_cgg;
92503 93546 CDS
ID metaerg.pl|05051
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF11350;
pfam_desc Protein of unknown function (DUF3152);
pfam_id DUF3152;
pfam_target db:Pfam-A.hmm|PF11350.8 evalue:5.7e-28 score:97.3 best_domain_score:95.8 name:DUF3152;
sp YES;
92503 92559 lipoprotein_signal_peptide
ID metaerg.pl|05052
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
94155 93946 CDS
ID metaerg.pl|05053
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
sp YES;
tm_num 1;
93946 94020 signal_peptide
ID metaerg.pl|05054
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
94155 93946 transmembrane_helix
ID metaerg.pl|05055
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology o93958-94017i;
94305 95804 CDS
ID metaerg.pl|05056
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
95854 96372 CDS
ID metaerg.pl|05057
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
sp YES;
tm_num 1;
95854 95994 signal_peptide
ID metaerg.pl|05058
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
95854 96372 transmembrane_helix
ID metaerg.pl|05059
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology o95917-95976i;
96369 97322 CDS
ID metaerg.pl|05060
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:0.00013 score:20.9 best_domain_score:20.0 name:TIGR02532;
tm_num 1;
96369 97322 transmembrane_helix
ID metaerg.pl|05061
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i96549-96617o;
97654 97373 CDS
ID metaerg.pl|05062
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium kyorinense;
genomedb_acc GCF_002101735.1;
genomedb_target db:genomedb|GCF_002101735.1|WP_083071445.1 16 82 evalue:8.9e-10 qcov:72.00 identity:57.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
98066 97794 CDS
ID metaerg.pl|05063
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
100667 98256 CDS
ID metaerg.pl|05064
allgo_ids GO:0004252; GO:0006508;
allko_ids K01181; K01183; K01179; K01225; K01448;
kegg_pathway_id 00530; 00500; 00550;
kegg_pathway_name Aminosugars metabolism; Starch and sucrose metabolism; Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF00082; PF00395;
pfam_desc Subtilase family; S-layer homology domain;
pfam_id Peptidase_S8; SLH;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:1.6e-41 score:141.8 best_domain_score:140.9 name:Peptidase_S8; db:Pfam-A.hmm|PF00395.20 evalue:1.2e-16 score:59.7 best_domain_score:23.0 name:SLH;
sp YES;
98256 98381 signal_peptide
ID metaerg.pl|05065
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
101816 100803 CDS
ID metaerg.pl|05066
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667305.1 4 330 evalue:1.6e-53 qcov:97.00 identity:40.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF11258; PF17479;
pfam_desc Protein of unknown function (DUF3048) N-terminal domain; Protein of unknown function (DUF3048) C-terminal domain;
pfam_id DUF3048; DUF3048_C;
pfam_target db:Pfam-A.hmm|PF11258.8 evalue:1.9e-36 score:124.6 best_domain_score:124.1 name:DUF3048; db:Pfam-A.hmm|PF17479.2 evalue:1.3e-13 score:50.5 best_domain_score:49.9 name:DUF3048_C;
sp YES;
100803 100862 lipoprotein_signal_peptide
ID metaerg.pl|05067
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
102002 102877 CDS
ID metaerg.pl|05068
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis coloradensis;
genomedb_acc GCF_001953865.1;
genomedb_target db:genomedb|GCF_001953865.1|WP_076168825.1 10 290 evalue:3.2e-37 qcov:96.60 identity:37.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:2.8e-06 score:27.2 best_domain_score:26.9 name:Metallophos;
102936 103292 CDS
ID metaerg.pl|05069
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
103628 103323 CDS
ID metaerg.pl|05070
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
103797 105554 CDS
ID metaerg.pl|05071
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
105641 106918 CDS
ID metaerg.pl|05072
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
sp YES;
tm_num 1;
105641 105700 lipoprotein_signal_peptide
ID metaerg.pl|05073
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
105641 106918 transmembrane_helix
ID metaerg.pl|05074
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
topology i105659-105718o;
107183 107521 CDS
ID metaerg.pl|05075
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
sp YES;
107183 107242 lipoprotein_signal_peptide
ID metaerg.pl|05076
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 17.5817; 0.00580231; 17.5609; 0.0150134;
>Feature NODE_30_length_106785_cov_29.2726
1696 398 CDS
ID metaerg.pl|05077
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482677.1 1 432 evalue:2.6e-189 qcov:100.00 identity:81.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:1.3e-76 score:257.1 best_domain_score:254.3 name:AI-2E_transport;
sprot_desc Putative transport protein YubA;
sprot_id sp|O32086|YUBA_BACSU;
sprot_target db:uniprot_sprot|sp|O32086|YUBA_BACSU 5 370 evalue:6.6e-62 qcov:84.70 identity:34.90;
tm_num 8;
1696 398 transmembrane_helix
ID metaerg.pl|05078
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i416-484o527-595i629-697o905-973i1094-1162o1172-1240i1259-1327o1370-1468i;
3466 1964 CDS
ID metaerg.pl|05079
allec_ids 6.1.1.6;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004824; GO:0000287; GO:0003676; GO:0006430;
allko_ids K04567;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265843.1 1 500 evalue:1.0e-253 qcov:100.00 identity:86.80;
kegg_pathway_id 00300; 00970;
kegg_pathway_name Lysine biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00152; PF01409; PF01336;
pfam_desc tRNA synthetases class II (D, K and N) ; tRNA synthetases class II core domain (F); OB-fold nucleic acid binding domain;
pfam_id tRNA-synt_2; tRNA-synt_2d; tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF00152.20 evalue:9.8e-82 score:273.7 best_domain_score:273.2 name:tRNA-synt_2; db:Pfam-A.hmm|PF01409.20 evalue:1.5e-07 score:30.4 best_domain_score:18.9 name:tRNA-synt_2d; db:Pfam-A.hmm|PF01336.25 evalue:6.1e-13 score:47.8 best_domain_score:46.8 name:tRNA_anti-codon;
sprot_desc Lysine--tRNA ligase;
sprot_id sp|Q839A8|SYK_ENTFA;
sprot_target db:uniprot_sprot|sp|Q839A8|SYK_ENTFA 3 497 evalue:5.8e-203 qcov:99.00 identity:70.90;
tigrfam_acc TIGR00499;
tigrfam_desc lysine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name lysS_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00499 evalue:1.6e-209 score:695.8 best_domain_score:695.6 name:TIGR00499;
4536 3646 CDS
ID metaerg.pl|05080
allgo_ids GO:0005737; GO:0006457; GO:0051082;
allko_ids K04083;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034300852.1 1 290 evalue:9.8e-135 qcov:98.00 identity:82.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF01430;
pfam_desc Hsp33 protein;
pfam_id HSP33;
pfam_target db:Pfam-A.hmm|PF01430.19 evalue:5e-91 score:304.0 best_domain_score:303.8 name:HSP33;
sprot_desc 33 kDa chaperonin;
sprot_id sp|Q839B0|HSLO_ENTFA;
sprot_target db:uniprot_sprot|sp|Q839B0|HSLO_ENTFA 1 287 evalue:3.5e-99 qcov:97.00 identity:59.20;
6756 4615 CDS
ID metaerg.pl|05081
allec_ids 3.4.24.-;
allgo_ids GO:0005524; GO:0016021; GO:0005886; GO:0016887; GO:0004222; GO:0008270; GO:0030163;
allko_ids K13254; K07767; K02343; K02340; K00733; K02341; K01509; K03798;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191204.1 1 699 evalue:0.0e+00 qcov:98.00 identity:90.10;
kegg_pathway_id 00230; 01030; 03030;
kegg_pathway_name Purine metabolism; Glycan structures - biosynthesis 1; DNA replication;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00004; PF07728; PF17862; PF01434; PF05496;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); AAA+ lid domain; Peptidase family M41; Holliday junction DNA helicase RuvB P-loop domain;
pfam_id AAA; AAA_5; AAA_lid_3; Peptidase_M41; RuvB_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1.1e-46 score:157.8 best_domain_score:156.6 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:2.4e-05 score:23.6 best_domain_score:20.9 name:AAA_5; db:Pfam-A.hmm|PF17862.1 evalue:2e-14 score:52.4 best_domain_score:50.5 name:AAA_lid_3; db:Pfam-A.hmm|PF01434.18 evalue:2.9e-72 score:241.8 best_domain_score:241.1 name:Peptidase_M41; db:Pfam-A.hmm|PF05496.12 evalue:0.0001 score:21.3 best_domain_score:19.6 name:RuvB_N;
sp YES;
sprot_desc ATP-dependent zinc metalloprotease FtsH;
sprot_id sp|C6VKW6|FTSH_LACPJ;
sprot_target db:uniprot_sprot|sp|C6VKW6|FTSH_LACPJ 2 654 evalue:1.3e-219 qcov:91.60 identity:62.40;
tigrfam_acc TIGR01241;
tigrfam_desc ATP-dependent metallopeptidase HflB;
tigrfam_mainrole Protein fate;
tigrfam_name FtsH_fam;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01241 evalue:1.6e-231 score:768.4 best_domain_score:768.1 name:TIGR01241;
tm_num 2;
4615 4692 signal_peptide
ID metaerg.pl|05082
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
6756 4615 transmembrane_helix
ID metaerg.pl|05083
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology o4642-4701i5008-5076o;
7475 6939 CDS
ID metaerg.pl|05084
allec_ids 2.4.2.8;
allgo_ids GO:0009116; GO:0005737; GO:0052657; GO:0004422; GO:0046872; GO:0000166; GO:0032264; GO:0006166;
allko_ids K00762; K00760;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034300857.1 1 178 evalue:2.2e-89 qcov:100.00 identity:94.40;
kegg_pathway_id 00240; 00230; 00983;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Drug metabolism - other enzymes;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id P1-PWY; SALVPURINE2-PWY; PWY-6579; SALVADEHYPOX-PWY; P121-PWY;
metacyc_pathway_name ; xanthine and xanthosine salvage;; superpathway of guanine and guanosine salvage;; adenosine nucleotides degradation II;; adenine and adenosine salvage I;;
metacyc_pathway_type ; Purine-Nucleotides-Salvage;; Guanine-Guanosine-Salvage; Super-Pathways;; Adenosine-Nucleotides-Degradation;; Adenine-Adenosine-Salvage;;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:8.4e-29 score:99.4 best_domain_score:99.1 name:Pribosyltran;
sprot_desc Hypoxanthine-guanine phosphoribosyltransferase;
sprot_id sp|Q839B2|HPRT_ENTFA;
sprot_target db:uniprot_sprot|sp|Q839B2|HPRT_ENTFA 1 178 evalue:4.9e-72 qcov:100.00 identity:74.20;
tigrfam_acc TIGR01203;
tigrfam_desc hypoxanthine phosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name HGPRTase;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01203 evalue:1.1e-66 score:222.9 best_domain_score:222.7 name:TIGR01203;
8923 7514 CDS
ID metaerg.pl|05085
allec_ids 6.3.4.19; 2.4.2.8; 6.3.4.-;
allgo_ids GO:0000166; GO:0005524; GO:0005737; GO:0008033; GO:0016879; GO:0052657; GO:0004422; GO:0046872; GO:0006166; GO:0006400;
allko_ids K15780;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265855.1 1 467 evalue:4.5e-126 qcov:99.60 identity:49.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id P1-PWY; SALVPURINE2-PWY; PWY-6579; SALVADEHYPOX-PWY; P121-PWY;
metacyc_pathway_name ; xanthine and xanthosine salvage;; superpathway of guanine and guanosine salvage;; adenosine nucleotides degradation II;; adenine and adenosine salvage I;;
metacyc_pathway_type ; Purine-Nucleotides-Salvage;; Guanine-Guanosine-Salvage; Super-Pathways;; Adenosine-Nucleotides-Degradation;; Adenine-Adenosine-Salvage;;
pfam_acc PF01171; PF11734;
pfam_desc PP-loop family; TilS substrate C-terminal domain;
pfam_id ATP_bind_3; TilS_C;
pfam_target db:Pfam-A.hmm|PF01171.20 evalue:1.3e-62 score:210.0 best_domain_score:209.2 name:ATP_bind_3; db:Pfam-A.hmm|PF11734.8 evalue:2e-11 score:42.4 best_domain_score:40.5 name:TilS_C;
sprot_desc Bifunctional protein TilS/HprT;
sprot_id sp|Q8YAC7|TILS_LISMO;
sprot_target db:uniprot_sprot|sp|Q8YAC7|TILS_LISMO 11 466 evalue:1.8e-68 qcov:97.20 identity:34.90;
tigrfam_acc TIGR02432; TIGR02433;
tigrfam_desc tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase, C-terminal domain;
tigrfam_mainrole Protein synthesis; Protein synthesis;
tigrfam_name lysidine_TilS_N; lysidine_TilS_C;
tigrfam_sub1role tRNA and rRNA base modification; tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR02432 evalue:2.5e-62 score:209.3 best_domain_score:208.6 name:TIGR02432; db:TIGRFAMs.hmm|TIGR02433 evalue:4.4e-16 score:57.2 best_domain_score:56.0 name:TIGR02433;
9442 9008 CDS
ID metaerg.pl|05086
allgo_ids GO:0003676; GO:0022627; GO:0003729; GO:0003735; GO:0006412;
allko_ids K03049; K00962; K03022; K12818; K07571;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482689.1 1 143 evalue:9.5e-59 qcov:99.30 identity:92.40;
kegg_pathway_id 00240; 03020; 00230;
kegg_pathway_name Pyrimidine metabolism; RNA polymerase; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00575;
pfam_desc S1 RNA binding domain;
pfam_id S1;
pfam_target db:Pfam-A.hmm|PF00575.23 evalue:8.4e-21 score:73.4 best_domain_score:72.9 name:S1;
sprot_desc hypothetical protein;
sprot_id sp|P37560|YABR_BACSU;
sprot_target db:uniprot_sprot|sp|P37560|YABR_BACSU 1 144 evalue:3.3e-34 qcov:100.00 identity:56.20;
9990 9553 CDS
ID metaerg.pl|05087
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482691.1 1 144 evalue:7.8e-45 qcov:99.30 identity:68.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF04977;
pfam_desc Septum formation initiator;
pfam_id DivIC;
pfam_target db:Pfam-A.hmm|PF04977.15 evalue:1.3e-15 score:56.1 best_domain_score:56.1 name:DivIC;
tm_num 1;
9990 9553 transmembrane_helix
ID metaerg.pl|05088
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i9667-9735o;
10524 10216 CDS
ID metaerg.pl|05089
allgo_ids GO:0003723;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091489253.1 14 97 evalue:1.0e-27 qcov:82.40 identity:81.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF01479;
pfam_desc S4 domain;
pfam_id S4;
pfam_target db:Pfam-A.hmm|PF01479.25 evalue:2.7e-11 score:42.2 best_domain_score:41.5 name:S4;
sprot_desc hypothetical protein;
sprot_id sp|P37557|YABO_BACSU;
sprot_target db:uniprot_sprot|sp|P37557|YABO_BACSU 14 94 evalue:3.3e-20 qcov:79.40 identity:59.30;
11537 10482 CDS
ID metaerg.pl|05090
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034300869.1 1 348 evalue:1.8e-71 qcov:99.10 identity:45.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF03819; PF01503;
pfam_desc MazG nucleotide pyrophosphohydrolase domain; Phosphoribosyl-ATP pyrophosphohydrolase;
pfam_id MazG; PRA-PH;
pfam_target db:Pfam-A.hmm|PF03819.17 evalue:1.9e-25 score:88.1 best_domain_score:88.1 name:MazG; db:Pfam-A.hmm|PF01503.17 evalue:1.2e-07 score:31.3 best_domain_score:29.7 name:PRA-PH;
15158 11604 CDS
ID metaerg.pl|05091
allec_ids 3.6.4.-; 3.6.1.-;
allgo_ids GO:0003676; GO:0005524; GO:0005737; GO:0003684; GO:0004386; GO:0006355; GO:0000716;
allko_ids K10896; K03725; K05591; K03723;
casgene_acc cd09639_cas3_CAS-I;
casgene_name cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:3.6e-14 score:51.8 best_domain_score:29.9 name:cas3;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191189.1 1 1184 evalue:0.0e+00 qcov:100.00 identity:81.80;
kegg_pathway_id 03420;
kegg_pathway_name Nucleotide excision repair;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id FOLSYN-PWY; PWY-6383; ALL-CHORISMATE-PWY; PWY-6147; PWY-6502; PWY-5354; PWY-6404;
metacyc_pathway_name superpathway of tetrahydrofolate biosynthesis and salvage;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of chorismate metabolism;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; oxidized GTP and dGTP detoxification;; ; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Folate-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Super-Pathways;; 6-HM-Dihydropterin-PP-Biosynthesis;; Detoxification; Metabolic-Clusters;; ; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF02559; PF00270; PF00271; PF04851; PF03461; PF17757;
pfam_desc CarD-like/TRCF domain; DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TRCF domain; UvrB interaction domain;
pfam_id CarD_CdnL_TRCF; DEAD; Helicase_C; ResIII; TRCF; UvrB_inter;
pfam_target db:Pfam-A.hmm|PF02559.16 evalue:8.1e-31 score:105.8 best_domain_score:103.6 name:CarD_CdnL_TRCF; db:Pfam-A.hmm|PF00270.29 evalue:6.6e-18 score:64.3 best_domain_score:62.1 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:1.5e-18 score:66.4 best_domain_score:61.2 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:1.9e-08 score:33.7 best_domain_score:33.6 name:ResIII; db:Pfam-A.hmm|PF03461.15 evalue:2.6e-26 score:91.1 best_domain_score:87.0 name:TRCF; db:Pfam-A.hmm|PF17757.1 evalue:2.6e-23 score:81.3 best_domain_score:79.6 name:UvrB_inter;
sprot_desc Transcription-repair-coupling factor;
sprot_id sp|P37474|MFD_BACSU;
sprot_target db:uniprot_sprot|sp|P37474|MFD_BACSU 1 1165 evalue:0.0e+00 qcov:98.40 identity:52.20;
tigrfam_acc TIGR00580;
tigrfam_desc transcription-repair coupling factor;
tigrfam_mainrole DNA metabolism;
tigrfam_name mfd;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00580 evalue:0 score:1136.3 best_domain_score:1136.1 name:TIGR00580;
15743 15183 CDS
ID metaerg.pl|05092
allec_ids 3.1.1.29;
allgo_ids GO:0004045; GO:0005737; GO:0006412;
allko_ids K01056;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191186.1 1 186 evalue:8.7e-97 qcov:100.00 identity:89.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF01195;
pfam_desc Peptidyl-tRNA hydrolase;
pfam_id Pept_tRNA_hydro;
pfam_target db:Pfam-A.hmm|PF01195.19 evalue:1.4e-59 score:200.1 best_domain_score:199.9 name:Pept_tRNA_hydro;
sprot_desc Peptidyl-tRNA hydrolase;
sprot_id sp|Q839C0|PTH_ENTFA;
sprot_target db:uniprot_sprot|sp|Q839C0|PTH_ENTFA 1 186 evalue:2.4e-69 qcov:100.00 identity:66.10;
tigrfam_acc TIGR00447;
tigrfam_desc aminoacyl-tRNA hydrolase;
tigrfam_mainrole Protein synthesis;
tigrfam_name pth;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00447 evalue:5.2e-63 score:211.3 best_domain_score:211.1 name:TIGR00447;
16253 15852 CDS
ID metaerg.pl|05093
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191184.1 1 133 evalue:1.1e-50 qcov:100.00 identity:70.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
tm_num 2;
16253 15852 transmembrane_helix
ID metaerg.pl|05094
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i15909-15962o15972-16031i;
16972 16385 CDS
ID metaerg.pl|05095
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191182.1 1 189 evalue:2.7e-48 qcov:96.90 identity:66.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
sp YES;
16385 16441 lipoprotein_signal_peptide
ID metaerg.pl|05096
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
17383 19191 CDS
ID metaerg.pl|05097
allec_ids 2.6.1.16;
allgo_ids GO:0097367; GO:1901135; GO:0005737; GO:0004360; GO:1901137; GO:0005975; GO:0006541;
allko_ids K00820;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482705.1 1 602 evalue:2.6e-304 qcov:100.00 identity:88.50;
kegg_pathway_id 00251; 00530;
kegg_pathway_name Glutamate metabolism; Aminosugars metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-6404; UDPNAGSYN-PWY; UDPNACETYLGALSYN-PWY; OANTIGEN-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; UDP-N-acetyl-D-glucosamine biosynthesis I;; UDP-N-acetyl-D-glucosamine biosynthesis II;; O-antigen building blocks biosynthesis (E. coli);;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; UDP-NAc-Glucosamine-Biosynthesis;; UDP-NAc-Glucosamine-Biosynthesis;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;;
pfam_acc PF13230; PF13522; PF13537; PF01380;
pfam_desc Glutamine amidotransferases class-II; Glutamine amidotransferase domain; Glutamine amidotransferase domain; SIS domain;
pfam_id GATase_4; GATase_6; GATase_7; SIS;
pfam_target db:Pfam-A.hmm|PF13230.6 evalue:7.4e-06 score:24.3 best_domain_score:23.3 name:GATase_4; db:Pfam-A.hmm|PF13522.6 evalue:4.1e-21 score:74.8 best_domain_score:73.8 name:GATase_6; db:Pfam-A.hmm|PF13537.6 evalue:8.8e-13 score:47.5 best_domain_score:46.4 name:GATase_7; db:Pfam-A.hmm|PF01380.22 evalue:5e-51 score:171.2 best_domain_score:102.2 name:SIS;
sprot_desc Glutamine--fructose-6-phosphate aminotransferase [isomerizing];
sprot_id sp|E0U070|GLMS_BACPZ;
sprot_target db:uniprot_sprot|sp|E0U070|GLMS_BACPZ 1 602 evalue:2.1e-223 qcov:100.00 identity:64.60;
tigrfam_acc TIGR01135;
tigrfam_desc glutamine-fructose-6-phosphate transaminase (isomerizing);
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name glmS;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR01135 evalue:2.7e-218 score:725.5 best_domain_score:725.3 name:TIGR01135;
20837 19251 CDS
ID metaerg.pl|05098
allec_ids 2.6.1.1; 4.1.1.12;
allgo_ids GO:0009058; GO:0030170; GO:0047688; GO:0042802; GO:0004069; GO:0006523; GO:0006531;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191179.1 1 521 evalue:3.7e-262 qcov:98.70 identity:84.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id ASPARTATESYN-PWY; PWY0-781; PWY-6318; THRESYN-PWY; MALATE-ASPARTATE-SHUTTLE-PWY; CYSTEINE-DEG-PWY; ASPASN-PWY; PWY-6146; GLUTDEG-PWY; PWY-5328; PWY-5913; ASPARTATE-DEG1-PWY; PWY-5347; PWY-3001; P4-PWY; PWY-5345;
metacyc_pathway_name L-aspartate biosynthesis;; aspartate superpathway;; L-phenylalanine degradation IV (mammalian, via side chain);; superpathway of L-threonine biosynthesis;; L-aspartate degradation II;; L-cysteine degradation I;; superpathway of L-aspartate and L-asparagine biosynthesis;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; L-glutamate degradation II;; superpathway of L-methionine salvage and degradation;; partial TCA cycle (obligate autotrophs);; L-aspartate degradation I;; superpathway of L-methionine biosynthesis (transsulfuration);; superpathway of L-isoleucine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-methionine biosynthesis (by sulfhydrylation);;
metacyc_pathway_type ASPARTATE-SYN;; Super-Pathways;; PHENYLALANINE-DEG;; Super-Pathways; THREONINE-BIOSYNTHESIS;; ASPARTATE-DEG;; CYSTEINE-DEG;; Amino-Acid-Biosynthesis; Metabolic-Clusters; Super-Pathways;; Biosynthesis; Super-Pathways;; ASPARTATE-SYN; GLUTAMATE-DEG;; METHIONINE-DEG; Super-Pathways;; TCA-VARIANTS;; ASPARTATE-DEG;; Methionine-De-novo-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:3.2e-18 score:65.3 best_domain_score:64.2 name:Aminotran_1_2;
sprot_desc Bifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase;
sprot_id sp|Q53IZ1|ASDP_PSESP;
sprot_target db:uniprot_sprot|sp|Q53IZ1|ASDP_PSESP 3 523 evalue:3.8e-112 qcov:98.70 identity:43.90;
tigrfam_acc TIGR03801;
tigrfam_desc aspartate 4-decarboxylase;
tigrfam_mainrole Energy metabolism;
tigrfam_name asp_4_decarbox;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR03801 evalue:3.5e-220 score:731.0 best_domain_score:730.8 name:TIGR03801;
23144 21183 CDS
ID metaerg.pl|05099
allec_ids 3.4.21.-;
allgo_ids GO:0016787; GO:0004252;
allko_ids K01303; K01730;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191176.1 1 650 evalue:1.7e-296 qcov:99.50 identity:72.90;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00561; PF05448; PF01738; PF12146; PF02129; PF00326;
pfam_desc alpha/beta hydrolase fold; Acetyl xylan esterase (AXE1); Dienelactone hydrolase family; Serine aminopeptidase, S33; X-Pro dipeptidyl-peptidase (S15 family); Prolyl oligopeptidase family;
pfam_id Abhydrolase_1; AXE1; DLH; Hydrolase_4; Peptidase_S15; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:4.3e-07 score:29.1 best_domain_score:22.7 name:Abhydrolase_1; db:Pfam-A.hmm|PF05448.12 evalue:6.4e-11 score:40.7 best_domain_score:36.0 name:AXE1; db:Pfam-A.hmm|PF01738.18 evalue:1.2e-08 score:34.0 best_domain_score:33.0 name:DLH; db:Pfam-A.hmm|PF12146.8 evalue:1.8e-09 score:36.5 best_domain_score:20.2 name:Hydrolase_4; db:Pfam-A.hmm|PF02129.18 evalue:0.00014 score:20.8 best_domain_score:12.0 name:Peptidase_S15; db:Pfam-A.hmm|PF00326.21 evalue:2.3e-50 score:170.3 best_domain_score:169.6 name:Peptidase_S9;
sprot_desc Uncharacterized peptidase YuxL;
sprot_id sp|P39839|YUXL_BACSU;
sprot_target db:uniprot_sprot|sp|P39839|YUXL_BACSU 4 652 evalue:3.9e-98 qcov:99.40 identity:33.40;
23320 24303 CDS
ID metaerg.pl|05100
allec_ids 1.1.1.27;
allgo_ids GO:0016616; GO:0055114; GO:0005737; GO:0004459; GO:0006096;
allko_ids K00025; K00024; K00026; K00016;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482713.1 1 327 evalue:1.2e-170 qcov:100.00 identity:91.70;
kegg_pathway_id 00620; 00640; 00630; 00010; 00710; 00720; 00020; 00272;
kegg_pathway_name Pyruvate metabolism; Propanoate metabolism; Glyoxylate and dicarboxylate metabolism; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Reductive carboxylate cycle (CO2 fixation); Citrate cycle (TCA cycle); Cysteine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id P461-PWY; P41-PWY; PWY-5100; P122-PWY; PWY-5481; PWY-3801; ANAEROFRUCAT-PWY; P124-PWY;
metacyc_pathway_name hexitol fermentation to lactate, formate, ethanol and acetate;; pyruvate fermentation to acetate and (S)-lactate I;; pyruvate fermentation to acetate and lactate II;; heterolactic fermentation;; pyruvate fermentation to (S)-lactate;; sucrose degradation II (sucrose synthase);; homolactic fermentation;; Bifidobacterium shunt;;
metacyc_pathway_type Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Pyruvate-Lactate-Fermentation;; SUCROSE-DEG;; Fermentation-to-Lactate; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;;
pfam_acc PF02866; PF00056;
pfam_desc lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain;
pfam_id Ldh_1_C; Ldh_1_N;
pfam_target db:Pfam-A.hmm|PF02866.18 evalue:2.6e-38 score:130.8 best_domain_score:130.2 name:Ldh_1_C; db:Pfam-A.hmm|PF00056.23 evalue:1.1e-43 score:147.9 best_domain_score:147.2 name:Ldh_1_N;
sprot_desc L-lactate dehydrogenase 1;
sprot_id sp|Q839C1|LDH1_ENTFA;
sprot_target db:uniprot_sprot|sp|Q839C1|LDH1_ENTFA 5 316 evalue:5.4e-133 qcov:95.40 identity:72.10;
tigrfam_acc TIGR01771;
tigrfam_desc L-lactate dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name L-LDH-NAD;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01771 evalue:4.4e-126 score:419.4 best_domain_score:419.2 name:TIGR01771;
24802 24359 CDS
ID metaerg.pl|05101
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034300892.1 1 147 evalue:1.6e-69 qcov:100.00 identity:90.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF07009;
pfam_desc NusG domain II;
pfam_id NusG_II;
pfam_target db:Pfam-A.hmm|PF07009.11 evalue:1.4e-25 score:88.8 best_domain_score:88.4 name:NusG_II;
tm_num 1;
24802 24359 transmembrane_helix
ID metaerg.pl|05102
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i24407-24475o;
25896 24922 CDS
ID metaerg.pl|05103
allec_ids 2.7.6.1;
allgo_ids GO:0009116; GO:0005737; GO:0005524; GO:0016301; GO:0000287; GO:0004749; GO:0006015; GO:0009165; GO:0009156;
allko_ids K00948;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482717.1 1 324 evalue:3.2e-171 qcov:100.00 identity:96.30;
kegg_pathway_id 00030; 00230;
kegg_pathway_name Pentose phosphate pathway; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-6404; PWY0-662; PRPP-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; PRPP biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; Sugar-Phosphate-Biosynthesis;; Super-Pathways;;
pfam_acc PF00156; PF13793; PF14572;
pfam_desc Phosphoribosyl transferase domain; N-terminal domain of ribose phosphate pyrophosphokinase; Phosphoribosyl synthetase-associated domain;
pfam_id Pribosyltran; Pribosyltran_N; Pribosyl_synth;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:3.4e-19 score:68.1 best_domain_score:65.4 name:Pribosyltran; db:Pfam-A.hmm|PF13793.6 evalue:1.3e-51 score:172.7 best_domain_score:170.5 name:Pribosyltran_N; db:Pfam-A.hmm|PF14572.6 evalue:3.5e-25 score:88.3 best_domain_score:84.1 name:Pribosyl_synth;
sprot_desc Ribose-phosphate pyrophosphokinase 2;
sprot_id sp|Q82ZA5|KPRS2_ENTFA;
sprot_target db:uniprot_sprot|sp|Q82ZA5|KPRS2_ENTFA 1 323 evalue:1.5e-138 qcov:99.70 identity:76.50;
tigrfam_acc TIGR01251;
tigrfam_desc ribose-phosphate diphosphokinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name ribP_PPkin;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01251 evalue:3.4e-124 score:412.9 best_domain_score:412.7 name:TIGR01251;
27379 26006 CDS
ID metaerg.pl|05104
allec_ids 2.7.7.23; 2.3.1.157; 2.7.7.23 2.3.1.157;
allgo_ids GO:0070567; GO:0005737; GO:0019134; GO:0000287; GO:0003977; GO:0000902; GO:0071555; GO:0009245; GO:0009103; GO:0009252; GO:0008360; GO:0006048;
allko_ids K00677; K00640; K00975; K01840; K00674; K02536; K04042; K11528; K00966; K00972; K05822;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034300896.1 1 457 evalue:4.7e-221 qcov:100.00 identity:84.00;
kegg_pathway_id 00500; 00530; 00300; 00272; 00540; 00920; 00051;
kegg_pathway_name Starch and sucrose metabolism; Aminosugars metabolism; Lysine biosynthesis; Cysteine metabolism; Lipopolysaccharide biosynthesis; Sulfur metabolism; Fructose and mannose metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id UDPNACETYLGALSYN-PWY; UDPNAGSYN-PWY; PWY-6404; OANTIGEN-PWY;
metacyc_pathway_name UDP-N-acetyl-D-glucosamine biosynthesis II;; UDP-N-acetyl-D-glucosamine biosynthesis I;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; O-antigen building blocks biosynthesis (E. coli);;
metacyc_pathway_type UDP-NAc-Glucosamine-Biosynthesis;; UDP-NAc-Glucosamine-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;;
pfam_acc PF02348; PF00132; PF14602; PF01128; PF00483; PF12804;
pfam_desc Cytidylyltransferase; Bacterial transferase hexapeptide (six repeats); Hexapeptide repeat of succinyl-transferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id CTP_transf_3; Hexapep; Hexapep_2; IspD; NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF02348.19 evalue:7.8e-08 score:31.7 best_domain_score:30.9 name:CTP_transf_3; db:Pfam-A.hmm|PF00132.24 evalue:1.8e-23 score:80.6 best_domain_score:29.6 name:Hexapep; db:Pfam-A.hmm|PF14602.6 evalue:1.3e-13 score:49.7 best_domain_score:20.6 name:Hexapep_2; db:Pfam-A.hmm|PF01128.19 evalue:7e-10 score:38.2 best_domain_score:37.2 name:IspD; db:Pfam-A.hmm|PF00483.23 evalue:1e-23 score:83.4 best_domain_score:83.0 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:2.2e-22 score:79.3 best_domain_score:78.8 name:NTP_transf_3;
sprot_desc Bifunctional protein GlmU;
sprot_id sp|A7Z0H3|GLMU_BACVZ;
sprot_target db:uniprot_sprot|sp|A7Z0H3|GLMU_BACVZ 1 456 evalue:1.6e-119 qcov:99.80 identity:54.40;
tigrfam_acc TIGR01173;
tigrfam_desc UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name glmU;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR01173 evalue:7.1e-179 score:594.5 best_domain_score:594.3 name:TIGR01173;
27614 28243 CDS
ID metaerg.pl|05105
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482721.1 1 208 evalue:1.5e-76 qcov:99.50 identity:72.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF11181;
pfam_desc Heat induced stress protein YflT;
pfam_id YflT;
pfam_target db:Pfam-A.hmm|PF11181.8 evalue:8.4e-13 score:47.9 best_domain_score:47.0 name:YflT;
29294 28434 CDS
ID metaerg.pl|05106
allgo_ids GO:0009116; GO:0003677; GO:0045982; GO:0045892;
allko_ids K00762; K00759; K09685;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482723.1 1 273 evalue:5.3e-138 qcov:95.50 identity:91.20;
kegg_pathway_id 00240; 00230; 00983;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Drug metabolism - other enzymes;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00156; PF09182;
pfam_desc Phosphoribosyl transferase domain; Bacterial purine repressor, N-terminal;
pfam_id Pribosyltran; PuR_N;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:4.6e-22 score:77.5 best_domain_score:77.0 name:Pribosyltran; db:Pfam-A.hmm|PF09182.10 evalue:3e-32 score:109.6 best_domain_score:108.7 name:PuR_N;
sprot_desc Pur operon repressor;
sprot_id sp|P37551|PURR_BACSU;
sprot_target db:uniprot_sprot|sp|P37551|PURR_BACSU 1 270 evalue:6.7e-87 qcov:94.40 identity:57.80;
tigrfam_acc TIGR01743;
tigrfam_desc pur operon repressor PurR;
tigrfam_mainrole Regulatory functions;
tigrfam_name purR_Bsub;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01743 evalue:4.4e-115 score:382.4 best_domain_score:382.2 name:TIGR01743;
32876 29445 CDS
ID metaerg.pl|05107
allec_ids 6.4.1.1;
allgo_ids GO:0005524; GO:0046872; GO:0005737; GO:0009374; GO:0004736; GO:0006094; GO:0006090;
allko_ids K01589; K15037; K01966; K00382; K01965; K01571; K11541; K01959; K01955; K01457; K01941; K00658; K01964; K14541; K03416; K01956; K11381; K01954; K00609; K01958; K01960; K01968; K08289; K11540;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482725.1 1 1143 evalue:0.0e+00 qcov:100.00 identity:90.50;
kegg_pathway_id 00010; 00310; 00280; 00230; 00670; 00260; 00020; 00240; 00791; 00330; 00620; 00252; 00220; 00251; 00640;
kegg_pathway_name Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine degradation; Purine metabolism; One carbon pool by folate; Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle); Pyrimidine metabolism; Atrazine degradation; Arginine and proline metabolism; Pyruvate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Glutamate metabolism; Propanoate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-5750; PWY-6146; P42-PWY; PWY-6142;
metacyc_pathway_name itaconate biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; incomplete reductive TCA cycle;; gluconeogenesis II (Methanobacterium thermoautotrophicum);;
metacyc_pathway_type Itaconate-Biosynthesis;; Biosynthesis; Super-Pathways;; Reductive-TCA-Cycles;; Gluconeogenesis; Super-Pathways;;
pfam_acc PF02222; PF02655; PF02785; PF00289; PF00364; PF13533; PF02786; PF07478; PF00682; PF02436;
pfam_desc ATP-grasp domain; ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Biotin-requiring enzyme; Biotin-lipoyl like; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus; HMGL-like; Conserved carboxylase domain;
pfam_id ATP-grasp; ATP-grasp_3; Biotin_carb_C; Biotin_carb_N; Biotin_lipoyl; Biotin_lipoyl_2; CPSase_L_D2; Dala_Dala_lig_C; HMGL-like; PYC_OADA;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:2e-10 score:39.7 best_domain_score:38.4 name:ATP-grasp; db:Pfam-A.hmm|PF02655.14 evalue:1.7e-05 score:24.2 best_domain_score:22.7 name:ATP-grasp_3; db:Pfam-A.hmm|PF02785.19 evalue:1.3e-32 score:111.3 best_domain_score:110.1 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:1.2e-40 score:137.7 best_domain_score:136.7 name:Biotin_carb_N; db:Pfam-A.hmm|PF00364.22 evalue:3.6e-17 score:61.2 best_domain_score:60.2 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:2e-10 score:39.6 best_domain_score:22.2 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF02786.17 evalue:5.2e-79 score:263.9 best_domain_score:263.1 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:7.9e-08 score:31.3 best_domain_score:30.1 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF00682.19 evalue:4.8e-30 score:104.2 best_domain_score:103.4 name:HMGL-like; db:Pfam-A.hmm|PF02436.18 evalue:4.9e-72 score:241.1 best_domain_score:240.3 name:PYC_OADA;
sprot_desc Pyruvate carboxylase;
sprot_id sp|Q9KWU4|PYC_BACSU;
sprot_target db:uniprot_sprot|sp|Q9KWU4|PYC_BACSU 1 1114 evalue:0.0e+00 qcov:97.50 identity:62.20;
tigrfam_acc TIGR01235;
tigrfam_desc pyruvate carboxylase;
tigrfam_mainrole Energy metabolism;
tigrfam_name pyruv_carbox;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01235 evalue:0 score:1775.2 best_domain_score:1775.0 name:TIGR01235;
34152 33067 CDS
ID metaerg.pl|05108
allec_ids 2.7.7.65;
allgo_ids GO:0000155; GO:0000160; GO:0004673; GO:0016021; GO:0071555; GO:0005886; GO:0052621; GO:0005525; GO:0046872; GO:0051271; GO:0090609;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_051503733.1 1 359 evalue:1.3e-101 qcov:99.40 identity:53.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF07694; PF00990;
pfam_desc 5TMR of 5TMR-LYT; Diguanylate cyclase, GGDEF domain;
pfam_id 5TM-5TMR_LYT; GGDEF;
pfam_target db:Pfam-A.hmm|PF07694.12 evalue:2.5e-06 score:26.3 best_domain_score:25.5 name:5TM-5TMR_LYT; db:Pfam-A.hmm|PF00990.21 evalue:2.3e-36 score:124.2 best_domain_score:123.8 name:GGDEF;
sprot_desc Probable diguanylate cyclase DgcT;
sprot_id sp|P75908|DGCT_ECOLI;
sprot_target db:uniprot_sprot|sp|P75908|DGCT_ECOLI 99 360 evalue:2.0e-11 qcov:72.60 identity:26.40;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:5.8e-42 score:142.4 best_domain_score:142.0 name:TIGR00254;
tm_num 6;
34152 33067 transmembrane_helix
ID metaerg.pl|05109
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i33085-33153o33181-33249i33286-33354o33367-33435i33472-33531o33544-33612i;
35362 34277 CDS
ID metaerg.pl|05110
allgo_ids GO:0016021; GO:0005886; GO:0052621; GO:0000155; GO:0043709; GO:0071555; GO:1902201;
allko_ids K18967;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191162.1 1 358 evalue:9.8e-105 qcov:99.20 identity:55.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00990;
pfam_desc Diguanylate cyclase, GGDEF domain;
pfam_id GGDEF;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:1.4e-42 score:144.4 best_domain_score:144.0 name:GGDEF;
sprot_desc hypothetical protein;
sprot_id sp|P54595|YHCK_BACSU;
sprot_target db:uniprot_sprot|sp|P54595|YHCK_BACSU 1 360 evalue:8.3e-42 qcov:99.70 identity:33.10;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:4e-45 score:152.7 best_domain_score:152.3 name:TIGR00254;
tm_num 6;
35362 34277 transmembrane_helix
ID metaerg.pl|05111
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i34289-34342o34385-34444i34481-34549o34577-34645i34664-34732o34760-34828i;
36482 35634 CDS
ID metaerg.pl|05112
allgo_ids GO:0005887; GO:0042626; GO:0043190; GO:0055085; GO:0005886; GO:0010043; GO:0006829;
allko_ids K09816;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191158.1 1 281 evalue:5.7e-116 qcov:99.60 identity:83.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00950; PF01032;
pfam_desc ABC 3 transport family; FecCD transport family;
pfam_id ABC-3; FecCD;
pfam_target db:Pfam-A.hmm|PF00950.17 evalue:3e-76 score:255.6 best_domain_score:255.4 name:ABC-3; db:Pfam-A.hmm|PF01032.18 evalue:8e-08 score:30.9 best_domain_score:30.7 name:FecCD;
sprot_desc High-affinity zinc uptake system membrane protein ZnuB;
sprot_id sp|O34610|ZNUB_BACSU;
sprot_target db:uniprot_sprot|sp|O34610|ZNUB_BACSU 1 271 evalue:3.3e-62 qcov:96.10 identity:47.50;
tm_num 8;
36482 35634 transmembrane_helix
ID metaerg.pl|05113
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i35670-35723o35766-35861i35880-35948o36006-36074i36111-36170o36180-36248i36267-36335o36345-36413i;
37141 36425 CDS
ID metaerg.pl|05114
allgo_ids GO:0005524; GO:0016887; GO:0030420; GO:0006829;
allko_ids K02010; K09817; K05847; K01997; K02006; K02052; K11072; K02045; K02071; K06861; K01996; K02013; K05816; K02049; K01995; K01998; K10111; K02000; K01990; K02023;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265902.1 1 238 evalue:2.1e-124 qcov:100.00 identity:92.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:5.3e-08 score:32.3 best_domain_score:21.7 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:4.9e-28 score:97.6 best_domain_score:96.9 name:ABC_tran;
sprot_desc Zinc transport system ATP-binding protein AdcC;
sprot_id sp|P0A2U6|ADCC_STRPN;
sprot_target db:uniprot_sprot|sp|P0A2U6|ADCC_STRPN 1 224 evalue:4.6e-81 qcov:94.10 identity:60.30;
38482 37256 CDS
ID metaerg.pl|05115
allgo_ids GO:0030001; GO:0046872; GO:0005886; GO:0007155; GO:0006829;
allko_ids K02077; K09815;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071847689.1 4 408 evalue:2.4e-163 qcov:99.30 identity:70.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF01297;
pfam_desc Zinc-uptake complex component A periplasmic;
pfam_id ZnuA;
pfam_target db:Pfam-A.hmm|PF01297.17 evalue:6.6e-72 score:241.2 best_domain_score:240.9 name:ZnuA;
sp YES;
sprot_desc High-affinity zinc uptake system binding-protein ZnuA;
sprot_id sp|O34966|ZNUA_BACSU;
sprot_target db:uniprot_sprot|sp|O34966|ZNUA_BACSU 3 407 evalue:3.5e-49 qcov:99.30 identity:30.40;
37256 37318 lipoprotein_signal_peptide
ID metaerg.pl|05116
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
39266 38721 CDS
ID metaerg.pl|05117
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191151.1 2 181 evalue:8.3e-44 qcov:99.40 identity:60.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
sp YES;
38721 38783 lipoprotein_signal_peptide
ID metaerg.pl|05118
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
40230 39382 CDS
ID metaerg.pl|05119
allec_ids 2.7.1.148;
allgo_ids GO:0005524; GO:0050515; GO:0019288; GO:0016114;
allko_ids K00872; K00919;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091488183.1 1 281 evalue:8.7e-117 qcov:99.60 identity:74.00;
kegg_pathway_id 00260; 00100;
kegg_pathway_name Glycine, serine and threonine metabolism; Biosynthesis of steroids;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id NONMEVIPP-PWY; PWY-6270; PWY-5121;
metacyc_pathway_name methylerythritol phosphate pathway I;; isoprene biosynthesis I;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);;
metacyc_pathway_type MEP-Pathways;; ISOPRENOIDS; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;;
pfam_acc PF08544; PF00288;
pfam_desc GHMP kinases C terminal ; GHMP kinases N terminal domain;
pfam_id GHMP_kinases_C; GHMP_kinases_N;
pfam_target db:Pfam-A.hmm|PF08544.13 evalue:7.5e-07 score:28.7 best_domain_score:27.6 name:GHMP_kinases_C; db:Pfam-A.hmm|PF00288.26 evalue:2.9e-13 score:49.1 best_domain_score:48.4 name:GHMP_kinases_N;
sprot_desc 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;
sprot_id sp|Q839U9|ISPE_ENTFA;
sprot_target db:uniprot_sprot|sp|Q839U9|ISPE_ENTFA 1 281 evalue:6.0e-80 qcov:99.60 identity:50.00;
tigrfam_acc TIGR00154;
tigrfam_desc 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ispE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00154 evalue:2.8e-77 score:259.3 best_domain_score:259.2 name:TIGR00154;
40626 40372 CDS
ID metaerg.pl|05120
allgo_ids GO:0006355; GO:0005737; GO:0030435;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191146.1 1 83 evalue:7.5e-32 qcov:98.80 identity:89.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF06257;
pfam_desc Biofilm formation stimulator VEG;
pfam_id VEG;
pfam_target db:Pfam-A.hmm|PF06257.11 evalue:2.9e-30 score:103.3 best_domain_score:103.2 name:VEG;
sprot_desc hypothetical protein;
sprot_id sp|P37466|VEG_BACSU;
sprot_target db:uniprot_sprot|sp|P37466|VEG_BACSU 1 81 evalue:3.9e-19 qcov:96.40 identity:54.30;
41900 40998 CDS
ID metaerg.pl|05121
allec_ids 2.1.1.182;
allgo_ids GO:0008168; GO:0005737; GO:0052908; GO:0003723; GO:0000179;
allko_ids K02528;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191142.1 1 295 evalue:2.1e-124 qcov:98.30 identity:79.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF08241; PF00398;
pfam_desc Methyltransferase domain; Ribosomal RNA adenine dimethylase;
pfam_id Methyltransf_11; RrnaAD;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:0.00012 score:21.9 best_domain_score:21.1 name:Methyltransf_11; db:Pfam-A.hmm|PF00398.20 evalue:8.2e-69 score:230.8 best_domain_score:230.7 name:RrnaAD;
sprot_desc Ribosomal RNA small subunit methyltransferase A;
sprot_id sp|Q837A7|RSMA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q837A7|RSMA_ENTFA 1 291 evalue:3.0e-98 qcov:97.00 identity:64.90;
tigrfam_acc TIGR00755;
tigrfam_desc ribosomal RNA small subunit methyltransferase A;
tigrfam_mainrole Protein synthesis;
tigrfam_name ksgA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00755 evalue:2.8e-84 score:281.6 best_domain_score:281.4 name:TIGR00755;
42462 41887 CDS
ID metaerg.pl|05122
allec_ids 3.1.26.8;
allgo_ids GO:0005737; GO:0046872; GO:0043822; GO:0019843; GO:0006364;
allko_ids K02316; K05985;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071847695.1 1 190 evalue:7.1e-70 qcov:99.50 identity:74.20;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF13331; PF01751; PF13662;
pfam_desc Domain of unknown function (DUF4093); Toprim domain; Toprim domain;
pfam_id DUF4093; Toprim; Toprim_4;
pfam_target db:Pfam-A.hmm|PF13331.6 evalue:7e-27 score:92.9 best_domain_score:91.7 name:DUF4093; db:Pfam-A.hmm|PF01751.22 evalue:4.2e-06 score:26.2 best_domain_score:24.7 name:Toprim; db:Pfam-A.hmm|PF13662.6 evalue:1.4e-05 score:24.7 best_domain_score:23.9 name:Toprim_4;
sprot_desc Ribonuclease M5 1;
sprot_id sp|D8IJV0|RNM51_LACSC;
sprot_target db:uniprot_sprot|sp|D8IJV0|RNM51_LACSC 3 185 evalue:2.4e-48 qcov:95.80 identity:57.40;
tigrfam_acc TIGR00334;
tigrfam_desc ribonuclease M5;
tigrfam_mainrole Transcription;
tigrfam_name 5S_RNA_mat_M5;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR00334 evalue:1.2e-53 score:180.9 best_domain_score:180.7 name:TIGR00334;
43237 42467 CDS
ID metaerg.pl|05123
allec_ids 3.1.-.-;
allgo_ids GO:0016788; GO:0005829; GO:0016888; GO:0046872;
allko_ids K03424;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191138.1 1 256 evalue:8.5e-119 qcov:100.00 identity:80.50;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01026;
pfam_desc TatD related DNase;
pfam_id TatD_DNase;
pfam_target db:Pfam-A.hmm|PF01026.21 evalue:5.5e-79 score:264.4 best_domain_score:264.2 name:TatD_DNase;
sprot_desc Uncharacterized metal-dependent hydrolase YabD;
sprot_id sp|P37545|YABD_BACSU;
sprot_target db:uniprot_sprot|sp|P37545|YABD_BACSU 1 254 evalue:6.0e-71 qcov:99.20 identity:50.00;
tigrfam_acc TIGR00010;
tigrfam_desc hydrolase, TatD family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00010;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00010 evalue:5.2e-83 score:277.5 best_domain_score:277.3 name:TIGR00010;
45401 43371 CDS
ID metaerg.pl|05124
allec_ids 6.1.1.10;
allgo_ids GO:0004812; GO:0006418; GO:0005737; GO:0005524; GO:0046872; GO:0004825; GO:0000049; GO:0006431;
allko_ids K01874;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191136.1 1 676 evalue:0.0e+00 qcov:100.00 identity:85.40;
kegg_pathway_id 00970; 00450; 00271;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Selenoamino acid metabolism; Methionine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF08264; PF00133; PF01406; PF09334; PF01588;
pfam_desc Anticodon-binding domain of tRNA; tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (C) catalytic domain; tRNA synthetases class I (M); Putative tRNA binding domain;
pfam_id Anticodon_1; tRNA-synt_1; tRNA-synt_1e; tRNA-synt_1g; tRNA_bind;
pfam_target db:Pfam-A.hmm|PF08264.13 evalue:4.2e-06 score:26.0 best_domain_score:25.1 name:Anticodon_1; db:Pfam-A.hmm|PF00133.22 evalue:1.1e-31 score:109.1 best_domain_score:50.5 name:tRNA-synt_1; db:Pfam-A.hmm|PF01406.19 evalue:3.8e-14 score:52.0 best_domain_score:32.4 name:tRNA-synt_1e; db:Pfam-A.hmm|PF09334.11 evalue:4e-115 score:383.9 best_domain_score:380.4 name:tRNA-synt_1g; db:Pfam-A.hmm|PF01588.20 evalue:3.2e-25 score:87.3 best_domain_score:86.5 name:tRNA_bind;
sprot_desc Methionine--tRNA ligase;
sprot_id sp|Q837B3|SYM_ENTFA;
sprot_target db:uniprot_sprot|sp|Q837B3|SYM_ENTFA 1 676 evalue:1.3e-282 qcov:100.00 identity:69.50;
tigrfam_acc TIGR00398; TIGR00399;
tigrfam_desc methionine--tRNA ligase; methionine--tRNA ligase, beta subunit;
tigrfam_mainrole Protein synthesis; Protein synthesis;
tigrfam_name metG; metG_C_term;
tigrfam_sub1role tRNA aminoacylation; tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00398 evalue:1e-174 score:581.3 best_domain_score:580.3 name:TIGR00398; db:TIGRFAMs.hmm|TIGR00399 evalue:4.6e-36 score:122.8 best_domain_score:122.0 name:TIGR00399;
46327 45503 CDS
ID metaerg.pl|05125
allec_ids 3.1.3.-;
allgo_ids GO:0005829; GO:0000287; GO:0016791;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482752.1 1 274 evalue:2.8e-120 qcov:100.00 identity:77.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id NADPHOS-DEPHOS-PWY; PWY-6456; PWY-5491; PWY-5083; PWY-882;
metacyc_pathway_name NAD phosphorylation and dephosphorylation;; serinol biosynthesis;; diethylphosphate degradation;; NAD/NADH phosphorylation and dephosphorylation;; L-ascorbate biosynthesis I (L-galactose pathway);;
metacyc_pathway_type NAD-Metabolism;; Polyamine-Biosynthesis;; Phosphorus-Compounds;; NAD-Metabolism;; Ascorbate-Biosynthesis;;
pfam_acc PF12710; PF13419; PF00702; PF08282; PF05116;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase;
pfam_id HAD; HAD_2; Hydrolase; Hydrolase_3; S6PP;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:1.1e-08 score:35.0 best_domain_score:16.0 name:HAD; db:Pfam-A.hmm|PF13419.6 evalue:1.1e-05 score:24.9 best_domain_score:13.7 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:2.7e-10 score:40.1 best_domain_score:20.0 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:8e-63 score:211.8 best_domain_score:211.6 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:1.8e-10 score:40.0 best_domain_score:26.3 name:S6PP;
sprot_desc Putative phosphatase YkrA;
sprot_id sp|Q45494|YKRA_BACSU;
sprot_target db:uniprot_sprot|sp|Q45494|YKRA_BACSU 2 274 evalue:5.7e-43 qcov:99.60 identity:37.20;
tigrfam_acc TIGR00099; TIGR01484;
tigrfam_desc Cof-like hydrolase; HAD hydrolase, family IIB;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name Cof-subfamily; HAD-SF-IIB;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00099 evalue:5.2e-58 score:195.8 best_domain_score:194.6 name:TIGR00099; db:TIGRFAMs.hmm|TIGR01484 evalue:1.9e-25 score:89.4 best_domain_score:86.5 name:TIGR01484;
48902 46491 CDS
ID metaerg.pl|05126
allgo_ids GO:0004553; GO:0005975;
allko_ids K01187; K12047;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191131.1 1 803 evalue:0.0e+00 qcov:100.00 identity:82.80;
kegg_pathway_id 00500; 00052;
kegg_pathway_name Starch and sucrose metabolism; Galactose metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF16338; PF17137; PF01055;
pfam_desc Domain of unknown function (DUF4968); Domain of unknown function (DUF5110); Glycosyl hydrolases family 31;
pfam_id DUF4968; DUF5110; Glyco_hydro_31;
pfam_target db:Pfam-A.hmm|PF16338.5 evalue:4.3e-08 score:32.6 best_domain_score:30.9 name:DUF4968; db:Pfam-A.hmm|PF17137.4 evalue:1.4e-09 score:37.3 best_domain_score:34.7 name:DUF5110; db:Pfam-A.hmm|PF01055.26 evalue:6.7e-101 score:337.8 best_domain_score:337.4 name:Glyco_hydro_31;
49396 50661 CDS
ID metaerg.pl|05127
allec_ids 6.1.1.1;
allgo_ids GO:0003723; GO:0005737; GO:0005524; GO:0004831; GO:0006437;
allko_ids K01866;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265928.1 1 421 evalue:1.0e-225 qcov:100.00 identity:93.10;
kegg_pathway_id 00400; 00970;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF01479; PF00579;
pfam_desc S4 domain; tRNA synthetases class I (W and Y);
pfam_id S4; tRNA-synt_1b;
pfam_target db:Pfam-A.hmm|PF01479.25 evalue:7.5e-06 score:24.8 best_domain_score:23.7 name:S4; db:Pfam-A.hmm|PF00579.25 evalue:2.9e-79 score:265.7 best_domain_score:265.3 name:tRNA-synt_1b;
sprot_desc Tyrosine--tRNA ligase 2;
sprot_id sp|Q631P9|SYY2_BACCZ;
sprot_target db:uniprot_sprot|sp|Q631P9|SYY2_BACCZ 1 420 evalue:1.4e-173 qcov:99.80 identity:70.50;
tigrfam_acc TIGR00234;
tigrfam_desc tyrosine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name tyrS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00234 evalue:5.6e-125 score:416.7 best_domain_score:416.6 name:TIGR00234;
52307 51342 CDS
ID metaerg.pl|05128
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191124.1 1 321 evalue:1.5e-152 qcov:100.00 identity:89.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF06207;
pfam_desc Protein of unknown function (DUF1002);
pfam_id DUF1002;
pfam_target db:Pfam-A.hmm|PF06207.11 evalue:1.6e-59 score:200.3 best_domain_score:200.0 name:DUF1002;
sp YES;
51342 51425 signal_peptide
ID metaerg.pl|05129
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
53321 52548 CDS
ID metaerg.pl|05130
allec_ids 1.1.1.-;
allgo_ids GO:0016491;
allko_ids K05711; K08683; K00022; K00065; K03366; K12420; K07535; K00120;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium subtropicum;
genomedb_acc GCF_900112455.1;
genomedb_target db:genomedb|GCF_900112455.1|WP_091528301.1 1 257 evalue:3.1e-121 qcov:100.00 identity:86.80;
kegg_pathway_id 00062; 00903; 00650; 00040; 00360; 00071; 00280; 00281; 00310; 00624; 00626; 00361; 00380; 00632; 00930;
kegg_pathway_name Fatty acid elongation in mitochondria; Limonene and pinene degradation; Butanoate metabolism; Pentose and glucuronate interconversions; Phenylalanine metabolism; Fatty acid metabolism; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Naphthalene and anthracene degradation; gamma-Hexachlorocyclohexane degradation; Tryptophan metabolism; Benzoate degradation via CoA ligation; Caprolactam degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-5392; PWY-5516; P302-PWY; PWY-5197; BENZCOA-PWY; PWY-5184; PWY-6501; PWY-6575; PWY-5466; PWY-5972; PWY-5195; PWY-5327; PWY-882; PWY-481; PWY-5789; ECASYN-PWY; PWY-5048; TOLSULFDEG-PWY; PWY-6577; CENTBENZCOA-PWY; LYSDEGII-PWY; 4TOLCARBDEG-PWY; PWY-321; PWY-6516; PWY1A0-6325; PWY-1186; SUCROSEUTIL2-PWY; PWY-6419;
metacyc_pathway_name reductive TCA cycle II;; D-xylose degradation II;; L-sorbose degradation;; lactate biosynthesis (archaea);; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; D-glucuronate degradation II;; juvenile hormone III biosynthesis I;; matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);; artemisinin and arteannuin B biosynthesis;; superpathway of L-lysine degradation;; L-ascorbate biosynthesis I (L-galactose pathway);; ethylbenzene degradation (anaerobic);; 3-hydroxypropanoate/4-hydroxybutanate cycle;; enterobacterial common antigen biosynthesis;; rosmarinic acid biosynthesis I;; 4-toluenesulfonate degradation I;; farnesylcysteine salvage pathway;; benzoyl-CoA degradation II (anaerobic);; L-lysine degradation III;; 4-toluenecarboxylate degradation;; cutin biosynthesis;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; actinorhodin biosynthesis;; L-homomethionine biosynthesis;; sucrose degradation VII (sucrose 3-dehydrogenase);; shikimate degradation II;;
metacyc_pathway_type Reductive-TCA-Cycles;; Xylose-Degradation;; Sugars-And-Polysaccharides-Degradation;; Energy-Metabolism;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; D-Glucuronate-Degradation;; HORMONE-SYN; JH-III-Biosynthesis;; LIGNAN-SYN;; Stearate-Biosynthesis;; SESQUITERPENE-LACTONE;; LYSINE-DEG; Super-Pathways;; Ascorbate-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Autotrophic-CO2-Fixation;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Rosmarinate-Biosynthesis;; 4-Toluenesulfonate-Degradation;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Benzoyl-CoA-Degradation;; LYSINE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; Sugar-Derivatives; Super-Pathways;; Antibiotic-Biosynthesis;; Other-Amino-Acid-Biosynthesis;; SUCROSE-DEG;; Shikimate-Degradation;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:6.9e-61 score:204.3 best_domain_score:204.0 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:4.1e-71 score:238.5 best_domain_score:238.3 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:1.2e-14 score:53.8 best_domain_score:53.4 name:KR;
sprot_desc Levodione reductase;
sprot_id sp|Q9LBG2|LVR_LEIAQ;
sprot_target db:uniprot_sprot|sp|Q9LBG2|LVR_LEIAQ 2 256 evalue:2.0e-50 qcov:99.20 identity:41.50;
54155 53502 CDS
ID metaerg.pl|05131
allec_ids 4.-.-.-;
allgo_ids GO:0003824; GO:0050662; GO:0016829;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034300937.1 1 217 evalue:3.5e-89 qcov:100.00 identity:76.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY1A0-6325;
metacyc_pathway_name actinorhodin biosynthesis;;
metacyc_pathway_type Antibiotic-Biosynthesis;;
pfam_acc PF01370; PF00056; PF13460; PF05368;
pfam_desc NAD dependent epimerase/dehydratase family; lactate/malate dehydrogenase, NAD binding domain; NAD(P)H-binding ; NmrA-like family;
pfam_id Epimerase; Ldh_1_N; NAD_binding_10; NmrA;
pfam_target db:Pfam-A.hmm|PF01370.21 evalue:4.3e-13 score:48.5 best_domain_score:47.7 name:Epimerase; db:Pfam-A.hmm|PF00056.23 evalue:7.2e-05 score:22.1 best_domain_score:21.3 name:Ldh_1_N; db:Pfam-A.hmm|PF13460.6 evalue:1.4e-46 score:158.0 best_domain_score:157.8 name:NAD_binding_10; db:Pfam-A.hmm|PF05368.13 evalue:6.2e-14 score:51.3 best_domain_score:50.5 name:NmrA;
sprot_desc Uncharacterized sugar epimerase YhfK;
sprot_id sp|O07609|YHFK_BACSU;
sprot_target db:uniprot_sprot|sp|O07609|YHFK_BACSU 1 217 evalue:1.2e-51 qcov:100.00 identity:50.20;
55035 54253 CDS
ID metaerg.pl|05132
allec_ids 7.2.2.16;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015623;
allko_ids K02071; K06861; K01996; K11072; K02045; K02010; K09817; K05847; K02052; K02006; K11084; K02032; K02017; K01990; K02023; K02000; K02049; K01995; K10111; K02031; K02013; K05816;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191120.1 1 260 evalue:1.7e-130 qcov:100.00 identity:88.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF13175; PF13304; PF00005;
pfam_desc AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_15; AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13175.6 evalue:1.7e-08 score:33.8 best_domain_score:26.5 name:AAA_15; db:Pfam-A.hmm|PF13304.6 evalue:1.6e-09 score:37.3 best_domain_score:25.2 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1e-34 score:119.3 best_domain_score:118.5 name:ABC_tran;
sprot_desc Iron(3+)-hydroxamate import ATP-binding protein FhuC;
sprot_id sp|P49938|FHUC_BACSU;
sprot_target db:uniprot_sprot|sp|P49938|FHUC_BACSU 1 260 evalue:3.1e-91 qcov:100.00 identity:60.40;
56021 55074 CDS
ID metaerg.pl|05133
allko_ids K02016;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191118.1 1 312 evalue:1.8e-126 qcov:99.00 identity:72.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF01497;
pfam_desc Periplasmic binding protein;
pfam_id Peripla_BP_2;
pfam_target db:Pfam-A.hmm|PF01497.18 evalue:2.6e-24 score:85.3 best_domain_score:84.8 name:Peripla_BP_2;
sp YES;
55074 55124 lipoprotein_signal_peptide
ID metaerg.pl|05134
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
57087 56035 CDS
ID metaerg.pl|05135
allgo_ids GO:0005215; GO:0016020; GO:0005887; GO:0022857; GO:0033214;
allko_ids K02015;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191115.1 9 350 evalue:7.0e-140 qcov:97.70 identity:74.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF01032;
pfam_desc FecCD transport family;
pfam_id FecCD;
pfam_target db:Pfam-A.hmm|PF01032.18 evalue:2.7e-91 score:305.0 best_domain_score:304.7 name:FecCD;
sprot_desc Iron(3+)-hydroxamate import system permease protein FhuG;
sprot_id sp|P49937|FHUG_BACSU;
sprot_target db:uniprot_sprot|sp|P49937|FHUG_BACSU 39 346 evalue:8.2e-87 qcov:88.00 identity:53.60;
tm_num 9;
57087 56035 transmembrane_helix
ID metaerg.pl|05136
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i56095-56163o56245-56313i56332-56400o56443-56511i56530-56598o56656-56724i56806-56874o56932-57000i57019-57078o;
58149 57091 CDS
ID metaerg.pl|05137
allgo_ids GO:0005215; GO:0016020; GO:0005887; GO:0022857; GO:0033214;
allko_ids K02015;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191113.1 1 352 evalue:7.0e-148 qcov:100.00 identity:81.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF01032;
pfam_desc FecCD transport family;
pfam_id FecCD;
pfam_target db:Pfam-A.hmm|PF01032.18 evalue:6.3e-87 score:290.7 best_domain_score:290.4 name:FecCD;
sprot_desc Iron(3+)-hydroxamate import system permease protein FhuB;
sprot_id sp|P49936|FHUB_BACSU;
sprot_target db:uniprot_sprot|sp|P49936|FHUB_BACSU 23 352 evalue:1.4e-94 qcov:93.80 identity:56.10;
tm_num 9;
58149 57091 transmembrane_helix
ID metaerg.pl|05138
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology o57172-57240i57340-57408o57418-57486i57505-57573o57601-57669i57748-57816o57874-57942i57979-58047o58060-58128i;
59211 58168 CDS
ID metaerg.pl|05139
allec_ids 1.18.1.2;
allgo_ids GO:0016491; GO:0055114; GO:0004324; GO:0050660; GO:0050661;
allko_ids K00382; K00266; K00384; K03388; K00383; K21567;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191108.1 1 339 evalue:3.8e-130 qcov:97.70 identity:67.80;
kegg_pathway_id 00790; 00620; 00251; 00252; 00910; 00020; 00240; 00260; 00010; 00480; 00280;
kegg_pathway_name Folate biosynthesis; Pyruvate metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Nitrogen metabolism; Citrate cycle (TCA cycle); Pyrimidine metabolism; Glycine, serine and threonine metabolism; Glycolysis / Gluconeogenesis; Glutathione metabolism; Valine, leucine and isoleucine degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-101; PHOTOALL-PWY;
metacyc_pathway_name photosynthesis light reactions;; oxygenic photosynthesis;;
metacyc_pathway_type Electron-Transfer; Photosynthesis;; Photosynthesis; Super-Pathways;;
pfam_acc PF01593; PF00890; PF01134; PF03486; PF13434; PF13450; PF00070; PF07992; PF13738; PF01946;
pfam_desc Flavin containing amine oxidoreductase; FAD binding domain; Glucose inhibited division protein A; HI0933-like protein; L-lysine 6-monooxygenase (NADPH-requiring); NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Thi4 family;
pfam_id Amino_oxidase; FAD_binding_2; GIDA; HI0933_like; K_oxygenase; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Thi4;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:2.8e-05 score:22.8 best_domain_score:12.7 name:Amino_oxidase; db:Pfam-A.hmm|PF00890.24 evalue:4.6e-05 score:21.9 best_domain_score:17.2 name:FAD_binding_2; db:Pfam-A.hmm|PF01134.22 evalue:6.2e-06 score:24.8 best_domain_score:12.2 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:5e-15 score:54.3 best_domain_score:28.9 name:HI0933_like; db:Pfam-A.hmm|PF13434.6 evalue:9.2e-11 score:40.7 best_domain_score:32.4 name:K_oxygenase; db:Pfam-A.hmm|PF13450.6 evalue:5.2e-07 score:29.0 best_domain_score:26.6 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:2.1e-14 score:53.0 best_domain_score:41.7 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.6e-33 score:115.5 best_domain_score:115.0 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:2.3e-28 score:98.6 best_domain_score:80.9 name:Pyr_redox_3; db:Pfam-A.hmm|PF01946.17 evalue:1.5e-07 score:30.2 best_domain_score:20.1 name:Thi4;
sprot_desc Ferredoxin--NADP reductase 1;
sprot_id sp|Q65GY3|FENR1_BACLD;
sprot_target db:uniprot_sprot|sp|Q65GY3|FENR1_BACLD 1 339 evalue:2.7e-82 qcov:97.70 identity:43.40;
60334 59648 CDS
ID metaerg.pl|05140
allgo_ids GO:0003700; GO:0006355;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091488226.1 1 227 evalue:1.4e-93 qcov:99.60 identity:74.90;
kegg_pathway_id 00300; 00310;
kegg_pathway_name Lysine biosynthesis; Lysine degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:7.3e-17 score:61.2 best_domain_score:60.7 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:4.7e-19 score:67.1 best_domain_score:66.3 name:GntR;
62355 60649 CDS
ID metaerg.pl|05141
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191079.1 7 568 evalue:1.8e-198 qcov:98.90 identity:61.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF09972;
pfam_desc Predicted membrane protein (DUF2207);
pfam_id DUF2207;
pfam_target db:Pfam-A.hmm|PF09972.9 evalue:3.2e-28 score:98.0 best_domain_score:91.1 name:DUF2207;
sp YES;
tm_num 2;
60649 60726 signal_peptide
ID metaerg.pl|05142
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
62355 60649 transmembrane_helix
ID metaerg.pl|05143
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i60661-60720o61387-61455i;
62667 62485 CDS
ID metaerg.pl|05144
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191077.1 1 58 evalue:5.4e-16 qcov:96.70 identity:75.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
63406 62699 CDS
ID metaerg.pl|05145
allec_ids 1.6.99.-;
allgo_ids GO:0009055; GO:0010181; GO:0003955; GO:0032414;
allko_ids K00355;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481539.1 2 235 evalue:7.1e-96 qcov:99.60 identity:72.60;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF02525;
pfam_desc Flavodoxin-like fold;
pfam_id Flavodoxin_2;
pfam_target db:Pfam-A.hmm|PF02525.17 evalue:1e-36 score:125.7 best_domain_score:125.1 name:Flavodoxin_2;
sprot_desc Uncharacterized NAD(P)H oxidoreductase YdeQ;
sprot_id sp|P96674|YDEQ_BACSU;
sprot_target db:uniprot_sprot|sp|P96674|YDEQ_BACSU 2 196 evalue:2.0e-36 qcov:83.00 identity:45.60;
64119 63511 CDS
ID metaerg.pl|05146
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481527.1 1 196 evalue:3.1e-76 qcov:97.00 identity:73.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF13238;
pfam_desc AAA domain;
pfam_id AAA_18;
pfam_target db:Pfam-A.hmm|PF13238.6 evalue:5.2e-09 score:36.0 best_domain_score:35.5 name:AAA_18;
64557 64120 CDS
ID metaerg.pl|05147
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481524.1 1 144 evalue:2.3e-57 qcov:99.30 identity:77.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF03061; PF13279;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily;
pfam_id 4HBT; 4HBT_2;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:3.1e-09 score:36.3 best_domain_score:36.0 name:4HBT; db:Pfam-A.hmm|PF13279.6 evalue:8e-07 score:28.8 best_domain_score:28.7 name:4HBT_2;
tigrfam_acc TIGR00051;
tigrfam_desc acyl-CoA thioester hydrolase, YbgC/YbaW family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00051;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00051 evalue:8.7e-24 score:83.3 best_domain_score:82.9 name:TIGR00051;
64691 64915 CDS
ID metaerg.pl|05148
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481522.1 2 74 evalue:1.6e-17 qcov:98.60 identity:67.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
tm_num 3;
64691 64915 transmembrane_helix
ID metaerg.pl|05149
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i64709-64768o64781-64834i64853-64906o;
65738 65019 CDS
ID metaerg.pl|05150
allgo_ids GO:0015267; GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K02440;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265690.1 1 239 evalue:2.8e-124 qcov:100.00 identity:90.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00230;
pfam_desc Major intrinsic protein;
pfam_id MIP;
pfam_target db:Pfam-A.hmm|PF00230.20 evalue:1.4e-47 score:161.5 best_domain_score:161.4 name:MIP;
sprot_desc Glycerol uptake facilitator protein 3;
sprot_id sp|F9UTW9|GLPF3_LACPL;
sprot_target db:uniprot_sprot|sp|F9UTW9|GLPF3_LACPL 1 235 evalue:2.9e-91 qcov:98.30 identity:68.50;
tigrfam_acc TIGR00861;
tigrfam_desc MIP family channel proteins;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name MIP;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR00861 evalue:6e-57 score:192.1 best_domain_score:192.0 name:TIGR00861;
tm_num 6;
65738 65019 transmembrane_helix
ID metaerg.pl|05151
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i65043-65111o65139-65207i65268-65336o65433-65486i65520-65588o65664-65732i;
67421 65754 CDS
ID metaerg.pl|05152
allec_ids 1.1.3.21;
allgo_ids GO:0016491; GO:0055114; GO:0009331; GO:0004368; GO:0004369; GO:0006071; GO:0006072;
allko_ids K00105;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191056.1 1 553 evalue:1.0e-249 qcov:99.60 identity:75.80;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF01266; PF16901;
pfam_desc FAD dependent oxidoreductase; C-terminal domain of alpha-glycerophosphate oxidase;
pfam_id DAO; DAO_C;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:1.3e-54 score:185.4 best_domain_score:184.3 name:DAO; db:Pfam-A.hmm|PF16901.5 evalue:8.5e-17 score:60.4 best_domain_score:59.4 name:DAO_C;
sprot_desc Alpha-glycerophosphate oxidase;
sprot_id sp|P0DB20|GLPO_STRP3;
sprot_target db:uniprot_sprot|sp|P0DB20|GLPO_STRP3 1 553 evalue:4.8e-150 qcov:99.60 identity:47.20;
tm_num 1;
67421 65754 transmembrane_helix
ID metaerg.pl|05153
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i65814-65873o;
68989 67466 CDS
ID metaerg.pl|05154
allec_ids 2.7.1.30;
allgo_ids GO:0005975; GO:0016773; GO:0005524; GO:0004370; GO:0019563; GO:0006071; GO:0006072;
allko_ids K11216; K00848; K00880; K00854; K00851; K00864;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481514.1 1 507 evalue:6.3e-283 qcov:100.00 identity:94.30;
kegg_pathway_id 00040; 00051; 00030; 00561;
kegg_pathway_name Pentose and glucuronate interconversions; Fructose and mannose metabolism; Pentose phosphate pathway; Glycerolipid metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY0-381; PWY-4261;
metacyc_pathway_name glycerol and glycerophosphodiester degradation;; glycerol degradation I;;
metacyc_pathway_type GLYCEROL-DEG; Super-Pathways;; Fatty-Acid-and-Lipid-Degradation; GLYCEROL-DEG;;
pfam_acc PF02782; PF00370;
pfam_desc FGGY family of carbohydrate kinases, C-terminal domain; FGGY family of carbohydrate kinases, N-terminal domain;
pfam_id FGGY_C; FGGY_N;
pfam_target db:Pfam-A.hmm|PF02782.16 evalue:2.7e-59 score:199.5 best_domain_score:198.6 name:FGGY_C; db:Pfam-A.hmm|PF00370.21 evalue:2e-82 score:275.7 best_domain_score:275.2 name:FGGY_N;
sprot_desc Glycerol kinase;
sprot_id sp|P18157|GLPK_BACSU;
sprot_target db:uniprot_sprot|sp|P18157|GLPK_BACSU 1 496 evalue:9.4e-201 qcov:97.80 identity:65.70;
tigrfam_acc TIGR01311;
tigrfam_desc glycerol kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name glycerol_kin;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01311 evalue:8.5e-219 score:726.1 best_domain_score:725.9 name:TIGR01311;
70165 69182 CDS
ID metaerg.pl|05155
allec_ids 2.3.1.8;
allgo_ids GO:0016746; GO:0005737; GO:0008959; GO:0006085;
allko_ids K13788; K00625; K06873; K00029;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481512.1 1 326 evalue:3.0e-161 qcov:99.70 identity:89.60;
kegg_pathway_id 00710; 00620; 00640; 00430;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Pyruvate metabolism; Propanoate metabolism; Taurine and hypotaurine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-5485; P41-PWY; PWY-5676; P161-PWY; P142-PWY; PWY-5600; PWY-5100; P122-PWY; PWY-5327; PWY-1281; P3-PWY; PWY0-1312; METH-ACETATE-PWY; P461-PWY; FERMENTATION-PWY; PROPFERM-PWY; PWY-5482; P441-PWY; PWY-5497; ACETATEUTIL-PWY;
metacyc_pathway_name pyruvate fermentation to acetate IV;; pyruvate fermentation to acetate and (S)-lactate I;; acetyl-CoA fermentation to butanoate II;; acetylene degradation (anaerobic);; pyruvate fermentation to acetate I;; pyruvate fermentation to acetate VII;; pyruvate fermentation to acetate and lactate II;; heterolactic fermentation;; superpathway of L-lysine degradation;; sulfoacetaldehyde degradation I;; gallate degradation III (anaerobic);; acetate and ATP formation from acetyl-CoA I;; methanogenesis from acetate;; hexitol fermentation to lactate, formate, ethanol and acetate;; mixed acid fermentation;; L-alanine fermentation to propanoate and acetate;; pyruvate fermentation to acetate II;; superpathway of N-acetylneuraminate degradation;; purine nucleobases degradation II (anaerobic);; superpathway of acetate utilization and formation;;
metacyc_pathway_type Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Acetyl-CoA-Butyrate; Super-Pathways;; Acetate-Formation; Pyruvate-Ethanol-Fermentation;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; LYSINE-DEG; Super-Pathways;; Sulfoacetaldehyde-Degradation;; GALLATE-DEG;; Acetate-Formation;; METHANOGENESIS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;; Pyruvate-Acetate-Fermentation;; CARBOXYLATES-DEG; Super-Pathways;; Fermentation; Purine-Degradation;; CARBOXYLATES-DEG; Super-Pathways;;
pfam_acc PF01515;
pfam_desc Phosphate acetyl/butaryl transferase;
pfam_id PTA_PTB;
pfam_target db:Pfam-A.hmm|PF01515.19 evalue:9.5e-121 score:402.2 best_domain_score:402.0 name:PTA_PTB;
sprot_desc Phosphate acetyltransferase;
sprot_id sp|P39646|PTAS_BACSU;
sprot_target db:uniprot_sprot|sp|P39646|PTAS_BACSU 2 324 evalue:9.6e-114 qcov:98.80 identity:63.80;
tigrfam_acc TIGR00651;
tigrfam_desc phosphate acetyltransferase;
tigrfam_mainrole Energy metabolism;
tigrfam_name pta;
tigrfam_sub1role Fermentation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00651 evalue:6.5e-118 score:392.8 best_domain_score:392.6 name:TIGR00651;
70936 70247 CDS
ID metaerg.pl|05156
allec_ids 3.2.2.27;
allgo_ids GO:0005737; GO:0004844; GO:0006284;
allko_ids K10800; K03648;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265679.1 1 226 evalue:6.7e-99 qcov:98.70 identity:72.10;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF03167;
pfam_desc Uracil DNA glycosylase superfamily;
pfam_id UDG;
pfam_target db:Pfam-A.hmm|PF03167.19 evalue:2.9e-23 score:81.8 best_domain_score:81.3 name:UDG;
sprot_desc Uracil-DNA glycosylase;
sprot_id sp|Q836Z5|UNG_ENTFA;
sprot_target db:uniprot_sprot|sp|Q836Z5|UNG_ENTFA 5 223 evalue:3.7e-80 qcov:95.60 identity:62.10;
tigrfam_acc TIGR00628;
tigrfam_desc uracil-DNA glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name ung;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00628 evalue:1.9e-80 score:268.8 best_domain_score:268.6 name:TIGR00628;
71036 71929 CDS
ID metaerg.pl|05157
allec_ids 3.1.3.-;
allgo_ids GO:0003824; GO:0005992; GO:0005829; GO:0000287; GO:0016791;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481506.1 1 293 evalue:4.3e-122 qcov:98.70 identity:75.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-882; PWY-5083; PWY-5491; PWY-6456; NADPHOS-DEPHOS-PWY;
metacyc_pathway_name L-ascorbate biosynthesis I (L-galactose pathway);; NAD/NADH phosphorylation and dephosphorylation;; diethylphosphate degradation;; serinol biosynthesis;; NAD phosphorylation and dephosphorylation;;
metacyc_pathway_type Ascorbate-Biosynthesis;; NAD-Metabolism;; Phosphorus-Compounds;; Polyamine-Biosynthesis;; NAD-Metabolism;;
pfam_acc PF12710; PF00702; PF08282; PF05116; PF02358;
pfam_desc haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase; Trehalose-phosphatase;
pfam_id HAD; Hydrolase; Hydrolase_3; S6PP; Trehalose_PPase;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:5.6e-07 score:29.4 best_domain_score:11.4 name:HAD; db:Pfam-A.hmm|PF00702.26 evalue:2.7e-12 score:46.7 best_domain_score:43.5 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:8.1e-62 score:208.5 best_domain_score:208.2 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:3.5e-19 score:68.5 best_domain_score:42.0 name:S6PP; db:Pfam-A.hmm|PF02358.16 evalue:1.7e-05 score:23.3 best_domain_score:14.3 name:Trehalose_PPase;
sprot_desc Putative phosphatase YxeH;
sprot_id sp|P54947|YXEH_BACSU;
sprot_target db:uniprot_sprot|sp|P54947|YXEH_BACSU 1 287 evalue:1.6e-22 qcov:96.60 identity:31.60;
tigrfam_acc TIGR00099; TIGR01484;
tigrfam_desc Cof-like hydrolase; HAD hydrolase, family IIB;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name Cof-subfamily; HAD-SF-IIB;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00099 evalue:3.7e-56 score:189.7 best_domain_score:189.1 name:TIGR00099; db:TIGRFAMs.hmm|TIGR01484 evalue:9.9e-28 score:96.8 best_domain_score:93.8 name:TIGR01484;
72606 71977 CDS
ID metaerg.pl|05158
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481501.1 3 200 evalue:1.7e-69 qcov:94.70 identity:61.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:3e-15 score:55.7 best_domain_score:55.1 name:NUDIX;
73398 72670 CDS
ID metaerg.pl|05159
allec_ids 3.5.1.-;
allgo_ids GO:0070403; GO:0005737; GO:0034979; GO:0008270;
allko_ids K12410;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091488545.1 1 241 evalue:2.3e-73 qcov:99.60 identity:54.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id LYSDEGII-PWY; PWY-5327; PWY-5784; PWY-6548; PWY-0; PWY-1822;
metacyc_pathway_name L-lysine degradation III;; superpathway of L-lysine degradation;; indole-3-acetate inactivation VIII;; ; putrescine degradation III;; indole-3-acetate activation I;;
metacyc_pathway_type LYSINE-DEG;; LYSINE-DEG; Super-Pathways;; Indole-3-Acetate-Inactivation;; ; Putrescine-Degradation;; Activation;;
pfam_acc PF02146;
pfam_desc Sir2 family;
pfam_id SIR2;
pfam_target db:Pfam-A.hmm|PF02146.17 evalue:3.4e-43 score:146.8 best_domain_score:145.7 name:SIR2;
sprot_desc NAD-dependent protein deacetylase;
sprot_id sp|Q8XNS6|NPD_CLOPE;
sprot_target db:uniprot_sprot|sp|Q8XNS6|NPD_CLOPE 2 237 evalue:8.8e-48 qcov:97.50 identity:44.40;
73515 74339 CDS
ID metaerg.pl|05160
allec_ids 2.7.1.35; 2.7.1.49 2.7.4.7;
allgo_ids GO:0005829; GO:0005524; GO:0008902; GO:0046872; GO:0008972; GO:0008478; GO:0009228;
allko_ids K00868;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071847538.1 1 274 evalue:9.1e-119 qcov:100.00 identity:78.80;
kegg_pathway_id 00750;
kegg_pathway_name Vitamin B6 metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PLPSAL-PWY; PWY0-845;
metacyc_pathway_name pyridoxal 5'-phosphate salvage I;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;;
metacyc_pathway_type Vitamin-B6-Biosynthesis;; Super-Pathways; Vitamin-B6-Biosynthesis;;
pfam_acc PF00294; PF08543;
pfam_desc pfkB family carbohydrate kinase; Phosphomethylpyrimidine kinase;
pfam_id PfkB; Phos_pyr_kin;
pfam_target db:Pfam-A.hmm|PF00294.24 evalue:3.1e-10 score:39.1 best_domain_score:38.6 name:PfkB; db:Pfam-A.hmm|PF08543.12 evalue:4.5e-79 score:264.5 best_domain_score:264.3 name:Phos_pyr_kin;
sprot_desc Pyridoxine kinase;
sprot_id sp|P39610|PDXK_BACSU;
sprot_target db:uniprot_sprot|sp|P39610|PDXK_BACSU 8 272 evalue:4.5e-72 qcov:96.70 identity:52.50;
tigrfam_acc TIGR00097;
tigrfam_desc hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name HMP-P_kinase;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00097 evalue:2.5e-73 score:245.6 best_domain_score:245.5 name:TIGR00097;
74715 75287 CDS
ID metaerg.pl|05161
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191031.1 1 190 evalue:2.9e-71 qcov:100.00 identity:63.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF04525;
pfam_desc LURP-one-related;
pfam_id LOR;
pfam_target db:Pfam-A.hmm|PF04525.12 evalue:6.7e-06 score:25.0 best_domain_score:24.4 name:LOR;
75899 75339 CDS
ID metaerg.pl|05162
allgo_ids GO:0016747;
allko_ids K06957; K01207; K00619;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071847541.1 1 186 evalue:4.9e-76 qcov:100.00 identity:72.00;
kegg_pathway_id 00530; 01032; 00220;
kegg_pathway_name Aminosugars metabolism; Glycan structures - degradation; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00583; PF13673; PF13508; PF13527; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7; Acetyltransf_9; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:4.7e-17 score:61.5 best_domain_score:61.2 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:1.6e-11 score:43.4 best_domain_score:41.3 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:4.1e-11 score:42.4 best_domain_score:41.7 name:Acetyltransf_7; db:Pfam-A.hmm|PF13527.7 evalue:3.8e-06 score:26.2 best_domain_score:18.1 name:Acetyltransf_9; db:Pfam-A.hmm|PF08445.10 evalue:3.1e-05 score:23.1 best_domain_score:22.3 name:FR47;
77705 75918 CDS
ID metaerg.pl|05163
allec_ids 3.1.25.-;
allgo_ids GO:0005515; GO:0005737; GO:0009380; GO:0003677; GO:0009381; GO:0006289; GO:0009432;
allko_ids K03703;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481484.1 1 595 evalue:1.3e-306 qcov:100.00 identity:88.60;
kegg_pathway_id 03420;
kegg_pathway_name Nucleotide excision repair;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF01541; PF12826; PF14520; PF02151; PF08459;
pfam_desc GIY-YIG catalytic domain; Helix-hairpin-helix motif; Helix-hairpin-helix domain; UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal;
pfam_id GIY-YIG; HHH_2; HHH_5; UVR; UvrC_HhH_N;
pfam_target db:Pfam-A.hmm|PF01541.24 evalue:5.3e-12 score:45.1 best_domain_score:43.2 name:GIY-YIG; db:Pfam-A.hmm|PF12826.7 evalue:7.3e-08 score:31.6 best_domain_score:30.2 name:HHH_2; db:Pfam-A.hmm|PF14520.6 evalue:2.9e-07 score:30.2 best_domain_score:28.4 name:HHH_5; db:Pfam-A.hmm|PF02151.19 evalue:2.1e-10 score:39.2 best_domain_score:39.2 name:UVR; db:Pfam-A.hmm|PF08459.11 evalue:9.1e-51 score:171.0 best_domain_score:169.6 name:UvrC_HhH_N;
sprot_desc UvrABC system protein C;
sprot_id sp|Q03QP1|UVRC_LACBA;
sprot_target db:uniprot_sprot|sp|Q03QP1|UVRC_LACBA 1 589 evalue:4.2e-216 qcov:99.00 identity:62.30;
tigrfam_acc TIGR00194;
tigrfam_desc excinuclease ABC subunit C;
tigrfam_mainrole DNA metabolism;
tigrfam_name uvrC;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00194 evalue:1.9e-182 score:607.1 best_domain_score:606.9 name:TIGR00194;
77984 77733 CDS
ID metaerg.pl|05164
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034300980.1 1 83 evalue:6.1e-26 qcov:100.00 identity:68.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
78180 79163 CDS
ID metaerg.pl|05165
allec_ids 1.-.-.-;
allgo_ids GO:0005829; GO:0016491;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191024.1 1 327 evalue:9.3e-171 qcov:100.00 identity:89.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-5479; PWY-5987; PWY-5469; PWYG-321; PWY-6113; PWY-5271; PWY-4302; PWY-2821; PWY-5826;
metacyc_pathway_name 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; sesamin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;;
metacyc_pathway_type LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;;
pfam_acc PF00248;
pfam_desc Aldo/keto reductase family;
pfam_id Aldo_ket_red;
pfam_target db:Pfam-A.hmm|PF00248.21 evalue:7.5e-64 score:215.0 best_domain_score:214.7 name:Aldo_ket_red;
sprot_desc Uncharacterized oxidoreductase YccK;
sprot_id sp|P46905|YCCK_BACSU;
sprot_target db:uniprot_sprot|sp|P46905|YCCK_BACSU 6 315 evalue:2.6e-34 qcov:94.80 identity:32.40;
79344 79931 CDS
ID metaerg.pl|05166
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000088.1_11 1 185 evalue:9.2e-65 qcov:94.90 identity:69.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
tm_num 5;
79344 79931 transmembrane_helix
ID metaerg.pl|05167
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i79377-79445o79488-79556i79575-79643o79686-79754i79773-79841o;
79924 80316 CDS
ID metaerg.pl|05168
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191019.1 1 130 evalue:3.9e-35 qcov:100.00 identity:59.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF14478;
pfam_desc Domain of unknown function (DUF4430);
pfam_id DUF4430;
pfam_target db:Pfam-A.hmm|PF14478.6 evalue:5.1e-11 score:42.3 best_domain_score:41.7 name:DUF4430;
sp YES;
tm_num 1;
79924 80007 signal_peptide
ID metaerg.pl|05169
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
79924 80316 transmembrane_helix
ID metaerg.pl|05170
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i79942-80010o;
81465 80710 CDS
ID metaerg.pl|05171
allec_ids 3.1.-.-;
allgo_ids GO:0016787; GO:0008236;
allko_ids K06889;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191016.1 1 247 evalue:8.9e-113 qcov:98.40 identity:79.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00561; PF12697; PF01738; PF12146; PF00326;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Dienelactone hydrolase family; Serine aminopeptidase, S33; Prolyl oligopeptidase family;
pfam_id Abhydrolase_1; Abhydrolase_6; DLH; Hydrolase_4; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:5.9e-09 score:35.2 best_domain_score:29.2 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:4.3e-07 score:30.0 best_domain_score:29.6 name:Abhydrolase_6; db:Pfam-A.hmm|PF01738.18 evalue:1.9e-06 score:26.8 best_domain_score:23.2 name:DLH; db:Pfam-A.hmm|PF12146.8 evalue:2.4e-10 score:39.3 best_domain_score:25.9 name:Hydrolase_4; db:Pfam-A.hmm|PF00326.21 evalue:5.8e-08 score:31.7 best_domain_score:31.2 name:Peptidase_S9;
sprot_desc Putative esterase YitV;
sprot_id sp|P70948|YITV_BACSU;
sprot_target db:uniprot_sprot|sp|P70948|YITV_BACSU 3 241 evalue:3.1e-35 qcov:95.20 identity:34.90;
82273 81449 CDS
ID metaerg.pl|05172
allgo_ids GO:0046353; GO:0046677;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071847549.1 1 263 evalue:1.3e-104 qcov:96.00 identity:68.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF02522;
pfam_desc Aminoglycoside 3-N-acetyltransferase;
pfam_id Antibiotic_NAT;
pfam_target db:Pfam-A.hmm|PF02522.14 evalue:1.2e-64 score:217.4 best_domain_score:217.2 name:Antibiotic_NAT;
83815 82529 CDS
ID metaerg.pl|05173
allgo_ids GO:0004553; GO:0009254; GO:0019867;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481467.1 1 428 evalue:2.2e-119 qcov:100.00 identity:67.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF06725;
pfam_desc 3D domain;
pfam_id 3D;
pfam_target db:Pfam-A.hmm|PF06725.11 evalue:8.6e-20 score:70.0 best_domain_score:69.1 name:3D;
sp YES;
82529 82606 signal_peptide
ID metaerg.pl|05174
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
84141 85706 CDS
ID metaerg.pl|05175
allko_ids K01514;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191011.1 1 521 evalue:1.2e-241 qcov:100.00 identity:79.50;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF02541;
pfam_desc Ppx/GppA phosphatase family;
pfam_id Ppx-GppA;
pfam_target db:Pfam-A.hmm|PF02541.16 evalue:1.3e-52 score:178.2 best_domain_score:177.7 name:Ppx-GppA;
85709 87832 CDS
ID metaerg.pl|05176
allec_ids 2.7.4.1;
allgo_ids GO:0009358; GO:0005524; GO:0046872; GO:0008976; GO:0006799;
allko_ids K00937;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191009.1 1 706 evalue:0.0e+00 qcov:99.90 identity:78.20;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF13091; PF02503; PF13090; PF17941; PF13089;
pfam_desc PLD-like domain; Polyphosphate kinase middle domain; Polyphosphate kinase C-terminal domain 2; Polyphosphate kinase C-terminal domain 1; Polyphosphate kinase N-terminal domain;
pfam_id PLDc_2; PP_kinase; PP_kinase_C; PP_kinase_C_1; PP_kinase_N;
pfam_target db:Pfam-A.hmm|PF13091.6 evalue:7.1e-10 score:38.1 best_domain_score:34.5 name:PLDc_2; db:Pfam-A.hmm|PF02503.17 evalue:8.6e-52 score:174.9 best_domain_score:173.9 name:PP_kinase; db:Pfam-A.hmm|PF13090.6 evalue:1.3e-72 score:242.0 best_domain_score:234.4 name:PP_kinase_C; db:Pfam-A.hmm|PF17941.1 evalue:1.9e-72 score:241.4 best_domain_score:240.6 name:PP_kinase_C_1; db:Pfam-A.hmm|PF13089.6 evalue:1.4e-33 score:114.6 best_domain_score:113.2 name:PP_kinase_N;
sprot_desc Polyphosphate kinase;
sprot_id sp|Q4L8X9|PPK1_STAHJ;
sprot_target db:uniprot_sprot|sp|Q4L8X9|PPK1_STAHJ 7 691 evalue:5.1e-205 qcov:96.90 identity:52.70;
tigrfam_acc TIGR03705;
tigrfam_desc polyphosphate kinase 1;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name poly_P_kin;
tigrfam_sub1role Phosphorus compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR03705 evalue:2.2e-251 score:835.2 best_domain_score:835.0 name:TIGR03705;
87958 88926 CDS
ID metaerg.pl|05177
allgo_ids GO:0003677; GO:0006355; GO:0045892; GO:0006164;
allko_ids K03604;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191006.1 1 322 evalue:1.4e-139 qcov:100.00 identity:75.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00356; PF00532; PF13377;
pfam_desc Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of LacI family; Periplasmic binding protein-like domain;
pfam_id LacI; Peripla_BP_1; Peripla_BP_3;
pfam_target db:Pfam-A.hmm|PF00356.21 evalue:1.5e-22 score:78.4 best_domain_score:76.2 name:LacI; db:Pfam-A.hmm|PF00532.21 evalue:4.2e-21 score:74.8 best_domain_score:74.5 name:Peripla_BP_1; db:Pfam-A.hmm|PF13377.6 evalue:1.1e-22 score:80.3 best_domain_score:78.0 name:Peripla_BP_3;
sprot_desc HTH-type transcriptional repressor PurR;
sprot_id sp|B7VMG4|PURR_VIBTL;
sprot_target db:uniprot_sprot|sp|B7VMG4|PURR_VIBTL 1 321 evalue:1.8e-32 qcov:99.70 identity:29.50;
90118 89204 CDS
ID metaerg.pl|05178
allgo_ids GO:0005887; GO:0042626; GO:0043190; GO:0055085; GO:0006829;
allko_ids K11709;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034301929.1 1 300 evalue:1.3e-129 qcov:98.70 identity:84.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00950;
pfam_desc ABC 3 transport family;
pfam_id ABC-3;
pfam_target db:Pfam-A.hmm|PF00950.17 evalue:1.8e-41 score:141.6 best_domain_score:140.1 name:ABC-3;
sprot_desc Zinc transport system membrane protein TroD;
sprot_id sp|P96119|TROD_TREPA;
sprot_target db:uniprot_sprot|sp|P96119|TROD_TREPA 3 285 evalue:2.0e-49 qcov:93.10 identity:42.80;
tm_num 9;
90118 89204 transmembrane_helix
ID metaerg.pl|05179
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology o89213-89281i89300-89359o89372-89428i89465-89533o89630-89689i89723-89791o89801-89869i89888-89956o89966-90025i;
91041 90115 CDS
ID metaerg.pl|05180
allgo_ids GO:0005887; GO:0042626; GO:0043190; GO:0055085; GO:0006829;
allko_ids K11708; K09819;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191001.1 1 304 evalue:3.3e-133 qcov:98.70 identity:86.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00950;
pfam_desc ABC 3 transport family;
pfam_id ABC-3;
pfam_target db:Pfam-A.hmm|PF00950.17 evalue:4.3e-63 score:212.4 best_domain_score:212.2 name:ABC-3;
sprot_desc Zinc transport system membrane protein TroC;
sprot_id sp|P96118|TROC_TREPA;
sprot_target db:uniprot_sprot|sp|P96118|TROC_TREPA 2 283 evalue:5.2e-61 qcov:91.60 identity:46.10;
tm_num 8;
91041 90115 transmembrane_helix
ID metaerg.pl|05181
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i90151-90219o90247-90300i90319-90378o90406-90474i90535-90603o90691-90759i90796-90864o90874-90942i;
91799 91044 CDS
ID metaerg.pl|05182
allgo_ids GO:0005524; GO:0016887; GO:0006829;
allko_ids K06861; K02071; K01996; K11072; K02045; K09817; K02010; K05847; K02006; K02052; K01990; K02023; K02000; K01995; K02049; K10111; K05816; K02013; K11710;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034301930.1 1 249 evalue:6.4e-119 qcov:99.20 identity:85.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.9e-09 score:37.0 best_domain_score:23.8 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:6.1e-30 score:103.8 best_domain_score:103.1 name:ABC_tran;
sprot_desc Zinc transport system ATP-binding protein TroB;
sprot_id sp|P96117|TROB_TREPA;
sprot_target db:uniprot_sprot|sp|P96117|TROB_TREPA 6 240 evalue:5.5e-69 qcov:93.60 identity:52.80;
92796 91849 CDS
ID metaerg.pl|05183
allgo_ids GO:0030001; GO:0046872; GO:0005886; GO:0007155;
allko_ids K09815; K11707; K02077;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481426.1 1 315 evalue:5.0e-137 qcov:100.00 identity:78.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF01297;
pfam_desc Zinc-uptake complex component A periplasmic;
pfam_id ZnuA;
pfam_target db:Pfam-A.hmm|PF01297.17 evalue:8.4e-74 score:247.4 best_domain_score:247.2 name:ZnuA;
sp YES;
sprot_desc Manganese-binding lipoprotein MntA;
sprot_id sp|O34385|MNTA_BACSU;
sprot_target db:uniprot_sprot|sp|O34385|MNTA_BACSU 17 313 evalue:1.2e-60 qcov:94.30 identity:42.80;
91849 91902 lipoprotein_signal_peptide
ID metaerg.pl|05184
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
92956 93609 CDS
ID metaerg.pl|05185
allgo_ids GO:0046914;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034301934.1 1 214 evalue:1.5e-100 qcov:98.60 identity:84.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF04023; PF01325; PF02742;
pfam_desc FeoA domain; Iron dependent repressor, N-terminal DNA binding domain; Iron dependent repressor, metal binding and dimerisation domain;
pfam_id FeoA; Fe_dep_repress; Fe_dep_repr_C;
pfam_target db:Pfam-A.hmm|PF04023.14 evalue:1.1e-06 score:28.0 best_domain_score:27.1 name:FeoA; db:Pfam-A.hmm|PF01325.19 evalue:1.5e-13 score:50.0 best_domain_score:49.1 name:Fe_dep_repress; db:Pfam-A.hmm|PF02742.15 evalue:7.8e-28 score:95.6 best_domain_score:94.3 name:Fe_dep_repr_C;
93706 94299 CDS
ID metaerg.pl|05186
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190991.1 1 197 evalue:7.5e-83 qcov:100.00 identity:78.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF09335;
pfam_desc SNARE associated Golgi protein;
pfam_id SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF09335.11 evalue:2.1e-19 score:69.4 best_domain_score:69.4 name:SNARE_assoc;
tm_num 5;
93706 94299 transmembrane_helix
ID metaerg.pl|05187
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i93742-93810o93853-93921i93940-94008o94120-94188i94207-94275o;
94399 96390 CDS
ID metaerg.pl|05188
allec_ids 3.2.1.41;
allgo_ids GO:0003824; GO:0005975; GO:0030246; GO:0051060;
allko_ids K00700; K01119; K01200; K01176; K08693; K01182; K01236;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190989.1 1 661 evalue:2.7e-302 qcov:99.70 identity:72.90;
kegg_pathway_id 00500; 00240; 00230;
kegg_pathway_name Starch and sucrose metabolism; Pyrimidine metabolism; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-842;
metacyc_pathway_name starch degradation I;;
metacyc_pathway_type Glycan-Degradation; Starch-Degradation;;
pfam_acc PF00128; PF02922;
pfam_desc Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain);
pfam_id Alpha-amylase; CBM_48;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:1.2e-13 score:50.6 best_domain_score:39.5 name:Alpha-amylase; db:Pfam-A.hmm|PF02922.18 evalue:5.9e-09 score:35.4 best_domain_score:34.0 name:CBM_48;
sprot_desc Pullulanase;
sprot_id sp|O33840|PULA_THEMA;
sprot_target db:uniprot_sprot|sp|O33840|PULA_THEMA 14 659 evalue:3.9e-114 qcov:97.40 identity:36.80;
tigrfam_acc TIGR02104;
tigrfam_desc pullulanase, type I;
tigrfam_name pulA_typeI;
tigrfam_target db:TIGRFAMs.hmm|TIGR02104 evalue:7.6e-189 score:627.8 best_domain_score:627.6 name:TIGR02104;
96985 97896 CDS
ID metaerg.pl|05189
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0005829; GO:0000986; GO:0043565;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190986.1 1 301 evalue:2.2e-134 qcov:99.30 identity:79.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:5.7e-15 score:54.3 best_domain_score:53.6 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:9.2e-28 score:96.3 best_domain_score:95.9 name:LysR_substrate;
sprot_desc Uncharacterized HTH-type transcriptional regulator HI_0775;
sprot_id sp|P44876|Y775_HAEIN;
sprot_target db:uniprot_sprot|sp|P44876|Y775_HAEIN 1 295 evalue:8.7e-69 qcov:97.40 identity:42.20;
99231 97936 CDS
ID metaerg.pl|05190
allgo_ids GO:0015128; GO:0016020; GO:0035429; GO:0005887;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481571.1 14 431 evalue:1.3e-207 qcov:97.00 identity:94.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF02447;
pfam_desc GntP family permease;
pfam_id GntP_permease;
pfam_target db:Pfam-A.hmm|PF02447.16 evalue:2.1e-09 score:35.9 best_domain_score:35.9 name:GntP_permease;
sprot_desc Uncharacterized transporter YxjC;
sprot_id sp|P42314|YXJC_BACSU;
sprot_target db:uniprot_sprot|sp|P42314|YXJC_BACSU 1 423 evalue:4.1e-80 qcov:98.10 identity:42.10;
tm_num 9;
99231 97936 transmembrane_helix
ID metaerg.pl|05191
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i97954-98022o98080-98148i98227-98295o98464-98532i98620-98673o98683-98742i98800-98868o98911-98979i99154-99222o;
100147 99371 CDS
ID metaerg.pl|05192
allec_ids 1.-.-.-;
allgo_ids GO:0003858; GO:0016616; GO:0055114;
allko_ids K00065; K12420; K03366; K05711; K08683; K00022; K00019;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481413.1 1 258 evalue:1.5e-131 qcov:100.00 identity:93.80;
kegg_pathway_id 00650; 00071; 00360; 00040; 00072; 00062; 00930; 00380; 00310; 00280; 00281;
kegg_pathway_name Butanoate metabolism; Fatty acid metabolism; Phenylalanine metabolism; Pentose and glucuronate interconversions; Synthesis and degradation of ketone bodies; Fatty acid elongation in mitochondria; Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-2821; PWY-5826; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987;
metacyc_pathway_name glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;;
metacyc_pathway_type GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;;
pfam_acc PF00106; PF13561; PF08659; PF02719;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain; Polysaccharide biosynthesis protein;
pfam_id adh_short; adh_short_C2; KR; Polysacc_synt_2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:4.1e-59 score:198.6 best_domain_score:198.4 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:3.7e-63 score:212.4 best_domain_score:212.0 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:8.5e-10 score:38.1 best_domain_score:37.3 name:KR; db:Pfam-A.hmm|PF02719.15 evalue:0.00014 score:20.4 best_domain_score:19.9 name:Polysacc_synt_2;
sprot_desc Uncharacterized oxidoreductase YxjF;
sprot_id sp|P42317|YXJF_BACSU;
sprot_target db:uniprot_sprot|sp|P42317|YXJF_BACSU 5 258 evalue:9.9e-90 qcov:98.40 identity:64.20;
tigrfam_acc TIGR01963;
tigrfam_desc 3-hydroxybutyrate dehydrogenase;
tigrfam_name PHB_DH;
tigrfam_target db:TIGRFAMs.hmm|TIGR01963 evalue:6.2e-110 score:365.6 best_domain_score:365.4 name:TIGR01963;
100831 100172 CDS
ID metaerg.pl|05193
allec_ids 2.8.3.9; 2.8.3.-;
allgo_ids GO:0008410; GO:0047371;
allko_ids K01029; K01035;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481410.1 1 219 evalue:6.4e-115 qcov:100.00 identity:96.30;
kegg_pathway_id 00650; 00640; 00632; 00280; 02020; 00072;
kegg_pathway_name Butanoate metabolism; Propanoate metabolism; Benzoate degradation via CoA ligation; Valine, leucine and isoleucine degradation; Two-component system - General; Synthesis and degradation of ketone bodies;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id ACETOACETATE-DEG-PWY; CARNMET-PWY; PWY-5327; P108-PWY; P3-PWY; PWY0-43; PROPFERM-PWY;
metacyc_pathway_name acetoacetate degradation (to acetyl CoA);; L-carnitine degradation I;; superpathway of L-lysine degradation;; pyruvate fermentation to propanoate I;; gallate degradation III (anaerobic);; conversion of succinate to propanoate;; L-alanine fermentation to propanoate and acetate;;
metacyc_pathway_type Fatty-Acid-and-Lipid-Degradation;; CARN-DEG;; LYSINE-DEG; Super-Pathways;; Pyruvate-Propanoate-Fermentation;; GALLATE-DEG;; SUCC-DEG;; Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;;
pfam_acc PF13336; PF01144;
pfam_desc Acetyl-CoA hydrolase/transferase C-terminal domain; Coenzyme A transferase;
pfam_id AcetylCoA_hyd_C; CoA_trans;
pfam_target db:Pfam-A.hmm|PF13336.6 evalue:1.3e-06 score:27.7 best_domain_score:27.0 name:AcetylCoA_hyd_C; db:Pfam-A.hmm|PF01144.23 evalue:3e-38 score:130.6 best_domain_score:130.5 name:CoA_trans;
sprot_desc Butyrate--acetoacetate CoA-transferase subunit B;
sprot_id sp|P23673|CTFB_CLOAB;
sprot_target db:uniprot_sprot|sp|P23673|CTFB_CLOAB 2 217 evalue:2.3e-71 qcov:98.60 identity:60.60;
tigrfam_acc TIGR02428;
tigrfam_desc 3-oxoacid CoA-transferase, B subunit;
tigrfam_name pcaJ_scoB_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR02428 evalue:3.2e-93 score:310.0 best_domain_score:309.8 name:TIGR02428;
101486 100824 CDS
ID metaerg.pl|05194
allec_ids 2.8.3.8; 2.8.3.-;
allgo_ids GO:0008410; GO:0008775; GO:0046459;
allko_ids K01029; K01028; K01027; K01041; K01034;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034301951.1 1 220 evalue:4.6e-113 qcov:100.00 identity:93.60;
kegg_pathway_id 00640; 00650; 00072; 02020; 00632; 00281; 00280; 00624;
kegg_pathway_name Propanoate metabolism; Butanoate metabolism; Synthesis and degradation of ketone bodies; Two-component system - General; Benzoate degradation via CoA ligation; Geraniol degradation; Valine, leucine and isoleucine degradation; 1- and 2-Methylnaphthalene degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id P3-PWY; PWY0-43; PROPFERM-PWY; P108-PWY; PWY-5676; ACETOACETATE-DEG-PWY; CARNMET-PWY;
metacyc_pathway_name gallate degradation III (anaerobic);; conversion of succinate to propanoate;; L-alanine fermentation to propanoate and acetate;; pyruvate fermentation to propanoate I;; acetyl-CoA fermentation to butanoate II;; acetoacetate degradation (to acetyl CoA);; L-carnitine degradation I;;
metacyc_pathway_type GALLATE-DEG;; SUCC-DEG;; Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;; Pyruvate-Propanoate-Fermentation;; Acetyl-CoA-Butyrate; Super-Pathways;; Fatty-Acid-and-Lipid-Degradation;; CARN-DEG;;
pfam_acc PF01144;
pfam_desc Coenzyme A transferase;
pfam_id CoA_trans;
pfam_target db:Pfam-A.hmm|PF01144.23 evalue:1.9e-68 score:229.4 best_domain_score:229.2 name:CoA_trans;
sprot_desc Acetate CoA-transferase subunit alpha;
sprot_id sp|P76458|ATOD_ECOLI;
sprot_target db:uniprot_sprot|sp|P76458|ATOD_ECOLI 3 213 evalue:6.3e-61 qcov:95.90 identity:55.00;
tigrfam_acc TIGR02429;
tigrfam_desc 3-oxoacid CoA-transferase, A subunit;
tigrfam_name pcaI_scoA_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR02429 evalue:4.7e-69 score:231.3 best_domain_score:231.0 name:TIGR02429;
102675 101497 CDS
ID metaerg.pl|05195
allec_ids 2.3.1.9; 2.3.1.16;
allgo_ids GO:0016747; GO:0005737; GO:0003985;
allko_ids K07550; K02615; K00632; K07509; K00626; K07508; K07823; K07513;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034301953.1 1 392 evalue:3.7e-198 qcov:100.00 identity:91.30;
kegg_pathway_id 00310; 00280; 00281; 00071; 00072; 02020; 00632; 00120; 00380; 00592; 00640; 00650; 00620; 00062; 01040; 00362;
kegg_pathway_name Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Fatty acid metabolism; Synthesis and degradation of ketone bodies; Two-component system - General; Benzoate degradation via CoA ligation; Bile acid biosynthesis; Tryptophan metabolism; alpha-Linolenic acid metabolism; Propanoate metabolism; Butanoate metabolism; Pyruvate metabolism; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-922; GLUDEG-II-PWY; PWY-5910; PWY-6435; PWY-561; PWY-5184; PWY1-3; PWY-6174; FAO-PWY; PWY-6146; PWY-5676; ACETOACETATE-DEG-PWY; ILEUDEG-PWY; PWY-5136; PWY-5177; CENTFERM-PWY; PWY-5327; PWY-5789; PWY66-368; TRYPTOPHAN-DEGRADATION-1;
metacyc_pathway_name mevalonate pathway I;; L-glutamate degradation VII (to butanoate);; superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; 4-hydroxybenzoate biosynthesis III (plants);; superpathway of glyoxylate cycle and fatty acid degradation;; toluene degradation VI (anaerobic);; polyhydroxybutanoate biosynthesis;; mevalonate pathway II (archaea);; fatty acid β-oxidation I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; acetyl-CoA fermentation to butanoate II;; acetoacetate degradation (to acetyl CoA);; L-isoleucine degradation I;; fatty acid β-oxidation II (peroxisome);; glutaryl-CoA degradation;; pyruvate fermentation to butanoate;; superpathway of L-lysine degradation;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; ketolysis;; L-tryptophan degradation III (eukaryotic);;
metacyc_pathway_type Mevalonate-Pathways;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; 4-Hydroxybenzoate-Biosynthesis;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Storage-Compounds-Biosynthesis;; Mevalonate-Pathways;; Fatty-Acid-Degradation;; Biosynthesis; Super-Pathways;; Acetyl-CoA-Butyrate; Super-Pathways;; Fatty-Acid-and-Lipid-Degradation;; ISOLEUCINE-DEG;; Fatty-Acid-Degradation;; CARBOXYLATES-DEG;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;; LYSINE-DEG; Super-Pathways;; Autotrophic-CO2-Fixation;; OTHER-ENERGY;; Super-Pathways; TRYPTOPHAN-DEG;;
pfam_acc PF00109; PF02803; PF00108;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id ketoacyl-synt; Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:9e-08 score:31.2 best_domain_score:25.5 name:ketoacyl-synt; db:Pfam-A.hmm|PF02803.18 evalue:8.2e-50 score:166.8 best_domain_score:166.8 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:1.5e-107 score:358.1 best_domain_score:357.6 name:Thiolase_N;
sprot_desc Acetyl-CoA acetyltransferase;
sprot_id sp|P45359|THLA_CLOAB;
sprot_target db:uniprot_sprot|sp|P45359|THLA_CLOAB 1 392 evalue:6.0e-139 qcov:100.00 identity:63.00;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:5.4e-149 score:495.4 best_domain_score:495.3 name:TIGR01930;
103458 102946 CDS
ID metaerg.pl|05196
allgo_ids GO:0006355; GO:0045735;
allko_ids K00971;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265616.1 1 169 evalue:2.3e-64 qcov:99.40 identity:67.50;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF02311; PF00190; PF07883;
pfam_desc AraC-like ligand binding domain; Cupin; Cupin domain;
pfam_id AraC_binding; Cupin_1; Cupin_2;
pfam_target db:Pfam-A.hmm|PF02311.19 evalue:0.00011 score:21.3 best_domain_score:18.1 name:AraC_binding; db:Pfam-A.hmm|PF00190.22 evalue:2.6e-06 score:26.3 best_domain_score:25.8 name:Cupin_1; db:Pfam-A.hmm|PF07883.11 evalue:2.8e-08 score:32.6 best_domain_score:32.0 name:Cupin_2;
sprot_desc hypothetical protein;
sprot_id sp|O34612|YJLB_BACSU;
sprot_target db:uniprot_sprot|sp|O34612|YJLB_BACSU 3 167 evalue:2.5e-25 qcov:97.10 identity:34.90;
103623 104126 CDS
ID metaerg.pl|05197
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190968.1 1 167 evalue:4.9e-59 qcov:100.00 identity:68.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
104972 104205 CDS
ID metaerg.pl|05198
allgo_ids GO:0055085;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190964.1 1 254 evalue:5.3e-89 qcov:99.60 identity:65.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF12679;
pfam_desc ABC-2 family transporter protein;
pfam_id ABC2_membrane_2;
pfam_target db:Pfam-A.hmm|PF12679.7 evalue:1.1e-06 score:27.3 best_domain_score:26.3 name:ABC2_membrane_2;
tm_num 6;
104972 104205 transmembrane_helix
ID metaerg.pl|05199
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i104265-104333o104406-104474i104559-104627o104655-104723i104742-104810o104877-104945i;
105886 104969 CDS
ID metaerg.pl|05200
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016887;
allko_ids K09687; K02049; K01995; K01998; K02000; K11962; K01990; K02023; K02017; K05847; K02010; K01997; K02006; K02052; K02045; K11072; K01996; K06861; K02071;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190962.1 1 305 evalue:4.1e-120 qcov:100.00 identity:72.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
metacyc_pathway_id PWY-6166; PWY-6188; PWY-6171; PWY-6135; PWY-6113; PWYG-321;
metacyc_pathway_name ; ; ; ; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.4e-07 score:30.1 best_domain_score:16.6 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:8.7e-29 score:100.0 best_domain_score:99.2 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YxlF;
sprot_id sp|P94374|YXLF_BACSU;
sprot_target db:uniprot_sprot|sp|P94374|YXLF_BACSU 3 304 evalue:4.7e-46 qcov:99.00 identity:36.50;
106089 105886 CDS
ID metaerg.pl|05201
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000114.1_2 1 67 evalue:2.6e-19 qcov:100.00 identity:76.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF13396;
pfam_desc Phospholipase_D-nuclease N-terminal;
pfam_id PLDc_N;
pfam_target db:Pfam-A.hmm|PF13396.6 evalue:8.7e-14 score:50.4 best_domain_score:49.7 name:PLDc_N;
tm_num 2;
106089 105886 transmembrane_helix
ID metaerg.pl|05202
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
topology i105910-105978o106006-106074i;
106295 106681 CDS
ID metaerg.pl|05203
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091489469.1 1 128 evalue:1.6e-49 qcov:100.00 identity:78.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.209; 0.0110001; 2.37163; 47.7855; 0.0409434;
pfam_acc PF03625;
pfam_desc Domain of unknown function DUF302;
pfam_id DUF302;
pfam_target db:Pfam-A.hmm|PF03625.14 evalue:1.5e-16 score:59.3 best_domain_score:58.8 name:DUF302;
>Feature NODE_31_length_105199_cov_45.711
92 1009 CDS
ID metaerg.pl|05204
allec_ids 2.7.1.23;
allgo_ids GO:0003951; GO:0006741; GO:0005737; GO:0005524; GO:0046872; GO:0019674;
allko_ids K00858;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090694.1 1 305 evalue:1.8e-168 qcov:100.00 identity:97.70;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id NADPHOS-DEPHOS-PWY; PWY-5083;
metacyc_pathway_name NAD phosphorylation and dephosphorylation;; NAD/NADH phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; NAD-Metabolism;;
pfam_acc PF01513;
pfam_desc ATP-NAD kinase;
pfam_id NAD_kinase;
pfam_target db:Pfam-A.hmm|PF01513.21 evalue:3.6e-67 score:225.8 best_domain_score:225.6 name:NAD_kinase;
sprot_desc NAD kinase 1;
sprot_id sp|Q8YN19|NADK1_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YN19|NADK1_NOSS1 1 305 evalue:4.7e-163 qcov:100.00 identity:90.50;
1299 1988 CDS
ID metaerg.pl|05205
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0009405; GO:0006355;
allko_ids K07652; K07646; K07641; K07673; K01120; K08475; K07639; K03407; K07654; K07682; K07651; K07718; K02478; K07648; K11354; K07778; K07768; K11356; K11640; K02484; K07642; K11711; K02491; K11231; K07704; K08282; K01937; K07708; K07677; K07710; K02489; K07716; K08479; K02668; K03388; K07678; K10715; K11527; K07653; K07636; K02482; K02480; K07644; K07709; K10681; K07676; K06379; K07675; K07647; K04757; K11357; K10125; K02486; K12767; K07669;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093900.1 2 229 evalue:5.1e-123 qcov:99.60 identity:98.20;
kegg_pathway_id 03090; 02020; 04011; 00240; 00230; 00790;
kegg_pathway_name Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Pyrimidine metabolism; Purine metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:2.8e-18 score:65.4 best_domain_score:64.1 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:1.9e-29 score:100.8 best_domain_score:100.2 name:Trans_reg_C;
sprot_desc Response regulator MprA;
sprot_id sp|A0R3I8|MPRA_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R3I8|MPRA_MYCS2 10 229 evalue:2.4e-47 qcov:96.10 identity:45.50;
2028 2393 CDS
ID metaerg.pl|05206
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006199115.1 1 121 evalue:1.3e-64 qcov:100.00 identity:95.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF09996;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2237);
pfam_id DUF2237;
pfam_target db:Pfam-A.hmm|PF09996.9 evalue:4.4e-56 score:187.1 best_domain_score:186.9 name:DUF2237;
4023 2626 CDS
ID metaerg.pl|05207
allec_ids 1.14.15.17;
allgo_ids GO:0010277; GO:0055114; GO:0009507; GO:0009941; GO:0009706; GO:0009534; GO:0009535; GO:0051537; GO:0051536; GO:0046872; GO:0032441; GO:0008219; GO:0015996; GO:0009816; GO:0009908; GO:0010154;
allko_ids K00517; K13071;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090692.1 1 465 evalue:4.9e-266 qcov:100.00 identity:92.70;
kegg_pathway_id 00940; 00361; 00903; 00626;
kegg_pathway_name Phenylpropanoid biosynthesis; gamma-Hexachlorocyclohexane degradation; Limonene and pinene degradation; Naphthalene and anthracene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF08417; PF00355;
pfam_desc Pheophorbide a oxygenase; Rieske [2Fe-2S] domain;
pfam_id PaO; Rieske;
pfam_target db:Pfam-A.hmm|PF08417.12 evalue:1.6e-22 score:78.7 best_domain_score:77.7 name:PaO; db:Pfam-A.hmm|PF00355.26 evalue:2e-20 score:71.7 best_domain_score:71.0 name:Rieske;
sprot_desc Pheophorbide a oxygenase, chloroplastic;
sprot_id sp|Q9FYC2|PAO_ARATH;
sprot_target db:uniprot_sprot|sp|Q9FYC2|PAO_ARATH 13 416 evalue:1.3e-68 qcov:86.90 identity:37.00;
tm_num 2;
4023 2626 transmembrane_helix
ID metaerg.pl|05208
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i3817-3885o3895-3963i;
4792 4334 CDS
ID metaerg.pl|05209
allec_ids 1.8.4.11;
allgo_ids GO:0008113; GO:0055114; GO:0006464;
allko_ids K07305; K12267; K07304;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090691.1 1 151 evalue:1.4e-76 qcov:99.30 identity:92.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF01625;
pfam_desc Peptide methionine sulfoxide reductase;
pfam_id PMSR;
pfam_target db:Pfam-A.hmm|PF01625.21 evalue:8.4e-62 score:207.1 best_domain_score:207.0 name:PMSR;
sprot_desc Peptide methionine sulfoxide reductase MsrA 1;
sprot_id sp|Q8YXZ4|MSRA1_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YXZ4|MSRA1_NOSS1 1 152 evalue:5.5e-72 qcov:100.00 identity:83.60;
tigrfam_acc TIGR00401;
tigrfam_desc peptide-methionine (S)-S-oxide reductase;
tigrfam_mainrole Cellular processes;
tigrfam_name msrA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00401 evalue:6e-62 score:207.7 best_domain_score:207.6 name:TIGR00401;
6562 5015 CDS
ID metaerg.pl|05210
allgo_ids GO:0016491; GO:0055114;
allko_ids K02636;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090690.1 5 515 evalue:6.8e-293 qcov:99.20 identity:95.50;
kegg_pathway_id 00195;
kegg_pathway_name Photosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF01593; PF01266; PF00890; PF01494; PF12831; PF03486; PF13450; PF07992; PF00355;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; FAD binding domain; FAD dependent oxidoreductase; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain;
pfam_id Amino_oxidase; DAO; FAD_binding_2; FAD_binding_3; FAD_oxidored; HI0933_like; NAD_binding_8; Pyr_redox_2; Rieske;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:1.1e-07 score:30.8 best_domain_score:22.4 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:2.2e-47 score:161.6 best_domain_score:161.3 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.5e-06 score:26.8 best_domain_score:25.9 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:1.7e-05 score:23.5 best_domain_score:22.7 name:FAD_binding_3; db:Pfam-A.hmm|PF12831.7 evalue:2.8e-07 score:29.5 best_domain_score:28.9 name:FAD_oxidored; db:Pfam-A.hmm|PF03486.14 evalue:2.8e-07 score:28.8 best_domain_score:17.3 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:6.5e-09 score:35.1 best_domain_score:33.7 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:3.3e-09 score:35.6 best_domain_score:22.6 name:Pyr_redox_2; db:Pfam-A.hmm|PF00355.26 evalue:1.1e-13 score:50.1 best_domain_score:48.9 name:Rieske;
7079 9406 CDS
ID metaerg.pl|05211
allec_ids 3.2.1.20;
allgo_ids GO:0004553; GO:0005975; GO:0004558; GO:0030246; GO:0032450;
allko_ids K01187; K12047;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090689.1 1 775 evalue:0.0e+00 qcov:100.00 identity:90.90;
kegg_pathway_id 00500; 00052;
kegg_pathway_name Starch and sucrose metabolism; Galactose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id PWY-842; GLYCOCAT-PWY;
metacyc_pathway_name starch degradation I;; glycogen degradation I;;
metacyc_pathway_type Glycan-Degradation; Starch-Degradation;; Glycan-Degradation; Glycogen-Degradation;;
pfam_acc PF16338; PF17137; PF13802; PF01055;
pfam_desc Domain of unknown function (DUF4968); Domain of unknown function (DUF5110); Galactose mutarotase-like; Glycosyl hydrolases family 31;
pfam_id DUF4968; DUF5110; Gal_mutarotas_2; Glyco_hydro_31;
pfam_target db:Pfam-A.hmm|PF16338.5 evalue:6.8e-21 score:73.6 best_domain_score:73.0 name:DUF4968; db:Pfam-A.hmm|PF17137.4 evalue:3e-14 score:52.3 best_domain_score:50.2 name:DUF5110; db:Pfam-A.hmm|PF13802.6 evalue:3e-19 score:68.3 best_domain_score:67.1 name:Gal_mutarotas_2; db:Pfam-A.hmm|PF01055.26 evalue:7.6e-160 score:532.1 best_domain_score:530.6 name:Glyco_hydro_31;
sprot_desc Alpha-glucosidase 2;
sprot_id sp|Q9F234|AGL2_BACTQ;
sprot_target db:uniprot_sprot|sp|Q9F234|AGL2_BACTQ 2 748 evalue:3.2e-176 qcov:96.40 identity:40.00;
9598 13482 CDS
ID metaerg.pl|05212
allgo_ids GO:0005515;
allko_ids K11356; K11640; K04486; K00760; K02484; K07642; K11711; K13490; K02491; K11231; K07643; K07704; K10909; K08282; K01937; K07677; K07708; K07645; K07652; K07646; K13598; K07641; K07673; K01120; K07639; K08475; K03407; K07637; K07654; K07777; K07649; K07682; K00936; K07651; K07698; K07718; K02478; K07679; K07648; K08884; K00873; K07711; K11328; K13533; K07683; K11354; K07778; K11633; K07768; K02575; K07644; K13532; K07709; K07650; K10681; K07676; K06379; K01769; K07717; K07675; K07680; K07647; K13040; K10942; K04757; K11357; K11629; K10125; K02342; K13761; K02486; K11383; K12767; K11520; K14509; K07769; K07640; K07710; K01768; K07656; K02489; K07697; K07716; K07674; K08479; K10916; K02668; K03388; K07678; K10715; K13587; K11527; K02030; K07638; K07653; K07636; K14489; K02482; K08801; K02480;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090688.1 1 1294 evalue:0.0e+00 qcov:100.00 identity:83.50;
kegg_pathway_id 00620; 03090; 02020; 04011; 00340; 00790; 00983; 00710; 00010; 03030; 00240; 05111; 00230;
kegg_pathway_name Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Histidine metabolism; Folate biosynthesis; Drug metabolism - other enzymes; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; DNA replication; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF01590; PF13185; PF13492; PF02518; PF00512; PF00989; PF08447; PF08448; PF13188; PF13426; PF00072;
pfam_desc GAF domain; GAF domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id GAF; GAF_2; GAF_3; HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:2.4e-12 score:46.9 best_domain_score:44.2 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:2.9e-14 score:52.8 best_domain_score:51.1 name:GAF_2; db:Pfam-A.hmm|PF13492.6 evalue:1.1e-09 score:38.0 best_domain_score:36.6 name:GAF_3; db:Pfam-A.hmm|PF02518.26 evalue:1.5e-28 score:98.8 best_domain_score:97.8 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.9e-16 score:59.0 best_domain_score:57.0 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:9.9e-07 score:28.0 best_domain_score:10.9 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:1.8e-09 score:37.0 best_domain_score:27.1 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:7.9e-07 score:28.5 best_domain_score:17.2 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:8.9e-08 score:31.2 best_domain_score:13.5 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:3.8e-15 score:55.3 best_domain_score:23.8 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:2.4e-20 score:72.0 best_domain_score:70.9 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.3e-24 score:85.9 best_domain_score:48.6 name:TIGR00229;
tm_num 8;
9598 13482 transmembrane_helix
ID metaerg.pl|05213
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology o9640-9708i9766-9819o9877-9945i10006-10059o10087-10155i10180-10248o10306-10374i10393-10461o;
13639 16278 CDS
ID metaerg.pl|05214
allec_ids 2.7.7.7;
allgo_ids GO:0006260; GO:0008408; GO:0005737; GO:0003887; GO:0003676; GO:0016539;
allko_ids K14162; K03763; K02323; K02337;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090687.1 1 874 evalue:0.0e+00 qcov:99.40 identity:97.50;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF07733; PF17657; PF02811;
pfam_desc Bacterial DNA polymerase III alpha NTPase domain; Bacterial DNA polymerase III alpha subunit finger domain; PHP domain;
pfam_id DNA_pol3_alpha; DNA_pol3_finger; PHP;
pfam_target db:Pfam-A.hmm|PF07733.12 evalue:1.6e-99 score:332.0 best_domain_score:330.6 name:DNA_pol3_alpha; db:Pfam-A.hmm|PF17657.1 evalue:1.1e-61 score:206.2 best_domain_score:203.2 name:DNA_pol3_finger; db:Pfam-A.hmm|PF02811.19 evalue:5.6e-47 score:159.4 best_domain_score:157.8 name:PHP;
sprot_desc DNA polymerase III subunit alpha;
sprot_id sp|P74750|DPO3A_SYNY3;
sprot_target db:uniprot_sprot|sp|P74750|DPO3A_SYNY3 1 874 evalue:0.0e+00 qcov:99.40 identity:74.50;
tigrfam_acc TIGR00594; TIGR01445;
tigrfam_desc DNA polymerase III, alpha subunit; intein N-terminal splicing region;
tigrfam_mainrole DNA metabolism;
tigrfam_name polc; intein_Nterm;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00594 evalue:0 score:1099.7 best_domain_score:1099.0 name:TIGR00594; db:TIGRFAMs.hmm|TIGR01445 evalue:6.5e-15 score:55.1 best_domain_score:52.3 name:TIGR01445;
16798 16421 CDS
ID metaerg.pl|05215
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198244.1 1 124 evalue:2.7e-62 qcov:99.20 identity:96.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
tm_num 2;
16798 16421 transmembrane_helix
ID metaerg.pl|05216
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i16454-16522o16532-16600i;
18084 16921 CDS
ID metaerg.pl|05217
allko_ids K13003; K08256; K13677; K00749; K00712; K03844; K02844; K03429; K12996; K13668; K02840; K00703;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198245.1 1 387 evalue:6.6e-200 qcov:100.00 identity:87.10;
kegg_pathway_id 00540; 01030; 00500; 00510; 01031; 00561;
kegg_pathway_name Lipopolysaccharide biosynthesis; Glycan structures - biosynthesis 1; Starch and sucrose metabolism; N-Glycan biosynthesis; Glycan structures - biosynthesis 2; Glycerolipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00534; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:1e-31 score:109.0 best_domain_score:108.3 name:Glycos_transf_1; db:Pfam-A.hmm|PF13692.6 evalue:2.2e-27 score:95.4 best_domain_score:94.8 name:Glyco_trans_1_4;
18599 18162 CDS
ID metaerg.pl|05218
allko_ids K04757; K06379; K08801; K08282;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090681.1 1 145 evalue:1.8e-78 qcov:100.00 identity:97.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF13581;
pfam_desc Histidine kinase-like ATPase domain;
pfam_id HATPase_c_2;
pfam_target db:Pfam-A.hmm|PF13581.6 evalue:8.7e-25 score:86.3 best_domain_score:86.2 name:HATPase_c_2;
19384 18902 CDS
ID metaerg.pl|05219
allec_ids 1.10.9.1;
allgo_ids GO:0009055; GO:0016020; GO:0016491; GO:0016021; GO:0042651; GO:0045158; GO:0045156; GO:0009767;
allko_ids K02637;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198248.1 1 160 evalue:3.8e-85 qcov:100.00 identity:98.80;
kegg_pathway_id 00195;
kegg_pathway_name Photosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00032;
pfam_desc Cytochrome b(C-terminal)/b6/petD;
pfam_id Cytochrom_B_C;
pfam_target db:Pfam-A.hmm|PF00032.17 evalue:1.3e-18 score:66.4 best_domain_score:66.4 name:Cytochrom_B_C;
sprot_desc Cytochrome b6-f complex subunit 4;
sprot_id sp|Q9L3Q0|PETD_ANAVT;
sprot_target db:uniprot_sprot|sp|Q9L3Q0|PETD_ANAVT 1 160 evalue:7.1e-86 qcov:100.00 identity:96.90;
tigrfam_acc TIGR01156;
tigrfam_desc cytb6/f complex subunit IV;
tigrfam_mainrole Energy metabolism;
tigrfam_name cytb6/f_IV;
tigrfam_sub1role Photosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01156 evalue:6.8e-98 score:324.2 best_domain_score:324.1 name:TIGR01156;
tm_num 3;
19384 18902 transmembrane_helix
ID metaerg.pl|05220
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i19007-19075o19184-19252i19286-19354o;
20357 19710 CDS
ID metaerg.pl|05221
allgo_ids GO:0009055; GO:0016020; GO:0016491; GO:0016021; GO:0042651; GO:0045158; GO:0046872; GO:0015979; GO:0022904;
allko_ids K02635;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_006198249.1 1 215 evalue:1.9e-119 qcov:100.00 identity:99.50;
kegg_pathway_id 00195;
kegg_pathway_name Photosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00033; PF13631; PF14358;
pfam_desc Cytochrome b/b6/petB; Cytochrome b(N-terminal)/b6/petB; Domain of unknown function (DUF4405);
pfam_id Cytochrome_B; Cytochrom_B_N_2; DUF4405;
pfam_target db:Pfam-A.hmm|PF00033.19 evalue:9e-81 score:269.4 best_domain_score:269.3 name:Cytochrome_B; db:Pfam-A.hmm|PF13631.6 evalue:6e-38 score:129.7 best_domain_score:129.7 name:Cytochrom_B_N_2; db:Pfam-A.hmm|PF14358.6 evalue:2.7e-06 score:27.1 best_domain_score:27.1 name:DUF4405;
sprot_desc Cytochrome b6;
sprot_id sp|P0A385|CYB6_ANAVT;
sprot_target db:uniprot_sprot|sp|P0A385|CYB6_ANAVT 1 215 evalue:1.9e-118 qcov:100.00 identity:96.30;
tm_num 5;
20357 19710 transmembrane_helix
ID metaerg.pl|05222
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i19803-19871o19962-20030i20055-20123o20136-20204i20259-20327o;
20737 21990 CDS
ID metaerg.pl|05223
allec_ids 3.4.21.102; 3.4.21.-;
allgo_ids GO:0005515; GO:0030288; GO:0031977; GO:0004175; GO:0008236; GO:0007165;
allko_ids K03797;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090679.1 1 417 evalue:1.1e-221 qcov:100.00 identity:95.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00595; PF13180; PF17820; PF03572;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Peptidase family S41;
pfam_id PDZ; PDZ_2; PDZ_6; Peptidase_S41;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:4.9e-07 score:29.3 best_domain_score:28.0 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:3.4e-07 score:29.7 best_domain_score:27.9 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:2.5e-11 score:42.5 best_domain_score:41.2 name:PDZ_6; db:Pfam-A.hmm|PF03572.18 evalue:1.5e-53 score:180.0 best_domain_score:179.4 name:Peptidase_S41;
sp YES;
sprot_desc Carboxyl-terminal-processing protease;
sprot_id sp|Q55669|CTPA_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55669|CTPA_SYNY3 1 411 evalue:1.0e-128 qcov:98.60 identity:58.70;
tigrfam_acc TIGR00225;
tigrfam_desc C-terminal processing peptidase;
tigrfam_mainrole Protein fate;
tigrfam_name prc;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00225 evalue:1.8e-106 score:355.2 best_domain_score:354.9 name:TIGR00225;
tm_num 1;
20737 20832 signal_peptide
ID metaerg.pl|05224
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
20737 21990 transmembrane_helix
ID metaerg.pl|05225
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i20770-20838o;
22781 22128 CDS
ID metaerg.pl|05226
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090678.1 1 217 evalue:2.6e-116 qcov:100.00 identity:93.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:2.5e-07 score:30.1 best_domain_score:14.9 name:Lactamase_B;
22971 24443 CDS
ID metaerg.pl|05227
allec_ids 3.4.24.-;
allgo_ids GO:0004222; GO:0006508; GO:0031969; GO:0016021; GO:0008237;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090677.1 1 490 evalue:2.8e-256 qcov:100.00 identity:93.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF02163;
pfam_desc Peptidase family M50;
pfam_id Peptidase_M50;
pfam_target db:Pfam-A.hmm|PF02163.22 evalue:3.6e-12 score:45.3 best_domain_score:25.0 name:Peptidase_M50;
sprot_desc Probable zinc metalloprotease EGY1, chloroplastic;
sprot_id sp|Q852K0|EGY1_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q852K0|EGY1_ORYSJ 138 490 evalue:1.9e-28 qcov:72.00 identity:28.70;
tm_num 9;
22971 24443 transmembrane_helix
ID metaerg.pl|05228
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology o22980-23033i23052-23120o23148-23207i23586-23654o23697-23765i23784-23843o23886-23954i24234-24302o24360-24428i;
25196 24630 CDS
ID metaerg.pl|05229
allec_ids 4.-.-.-;
allgo_ids GO:0017009; GO:0016829;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090676.1 1 188 evalue:1.3e-95 qcov:100.00 identity:94.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id PWY1A0-6325;
metacyc_pathway_name actinorhodin biosynthesis;;
metacyc_pathway_type Antibiotic-Biosynthesis;;
pfam_acc PF09367;
pfam_desc CpeS-like protein;
pfam_id CpeS;
pfam_target db:Pfam-A.hmm|PF09367.10 evalue:2.6e-74 score:248.0 best_domain_score:247.8 name:CpeS;
sprot_desc Phycocyanobilin lyase CpcS 1;
sprot_id sp|Q8YZ70|CPCS1_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YZ70|CPCS1_NOSS1 1 188 evalue:6.5e-91 qcov:100.00 identity:88.30;
25948 25268 CDS
ID metaerg.pl|05230
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090675.1 1 225 evalue:6.1e-113 qcov:99.60 identity:96.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00514; PF02985; PF13646; PF13513; PF03130;
pfam_desc Armadillo/beta-catenin-like repeat; HEAT repeat; HEAT repeats; HEAT-like repeat; PBS lyase HEAT-like repeat;
pfam_id Arm; HEAT; HEAT_2; HEAT_EZ; HEAT_PBS;
pfam_target db:Pfam-A.hmm|PF00514.23 evalue:2.2e-07 score:29.9 best_domain_score:13.8 name:Arm; db:Pfam-A.hmm|PF02985.22 evalue:1.6e-17 score:61.4 best_domain_score:12.7 name:HEAT; db:Pfam-A.hmm|PF13646.6 evalue:1.4e-33 score:114.4 best_domain_score:63.6 name:HEAT_2; db:Pfam-A.hmm|PF13513.6 evalue:1.2e-08 score:34.5 best_domain_score:12.4 name:HEAT_EZ; db:Pfam-A.hmm|PF03130.16 evalue:7.1e-21 score:72.0 best_domain_score:22.9 name:HEAT_PBS;
28403 26154 CDS
ID metaerg.pl|05231
allgo_ids GO:0015562; GO:0055085;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090674.1 1 749 evalue:7.0e-310 qcov:100.00 identity:80.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF02321;
pfam_desc Outer membrane efflux protein;
pfam_id OEP;
pfam_target db:Pfam-A.hmm|PF02321.18 evalue:8.9e-57 score:191.2 best_domain_score:104.5 name:OEP;
sp YES;
26154 26231 signal_peptide
ID metaerg.pl|05232
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
30068 28509 CDS
ID metaerg.pl|05233
allec_ids 2.7.11.1;
allgo_ids GO:0003678; GO:0005524; GO:0006260; GO:0003677; GO:0000287; GO:0004674; GO:0004712; GO:0007623; GO:0042752; GO:0006355;
allko_ids K08482;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090673.1 1 519 evalue:7.1e-290 qcov:100.00 identity:98.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF13191; PF13401; PF13481; PF06745; PF03796; PF09848; PF08423; PF00154; PF00158;
pfam_desc AAA ATPase domain; AAA domain; AAA domain; KaiC; DnaB-like helicase C terminal domain; Uncharacterized conserved protein (DUF2075); Rad51; recA bacterial DNA recombination protein; Sigma-54 interaction domain;
pfam_id AAA_16; AAA_22; AAA_25; ATPase; DnaB_C; DUF2075; Rad51; RecA; Sigma54_activat;
pfam_target db:Pfam-A.hmm|PF13191.6 evalue:2.1e-09 score:37.2 best_domain_score:21.7 name:AAA_16; db:Pfam-A.hmm|PF13401.6 evalue:1.8e-06 score:27.5 best_domain_score:12.6 name:AAA_22; db:Pfam-A.hmm|PF13481.6 evalue:1.2e-12 score:47.1 best_domain_score:25.4 name:AAA_25; db:Pfam-A.hmm|PF06745.13 evalue:5.6e-123 score:407.9 best_domain_score:272.0 name:ATPase; db:Pfam-A.hmm|PF03796.15 evalue:1.7e-06 score:26.8 best_domain_score:16.8 name:DnaB_C; db:Pfam-A.hmm|PF09848.9 evalue:2.5e-05 score:22.9 best_domain_score:11.3 name:DUF2075; db:Pfam-A.hmm|PF08423.11 evalue:8.6e-07 score:27.7 best_domain_score:16.1 name:Rad51; db:Pfam-A.hmm|PF00154.21 evalue:6.1e-06 score:25.1 best_domain_score:12.0 name:RecA; db:Pfam-A.hmm|PF00158.26 evalue:4.2e-05 score:22.5 best_domain_score:12.8 name:Sigma54_activat;
sprot_desc Circadian clock protein kinase KaiC;
sprot_id sp|Q8YT40|KAIC_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YT40|KAIC_NOSS1 1 519 evalue:1.4e-271 qcov:100.00 identity:92.30;
tigrfam_acc TIGR02655;
tigrfam_desc circadian clock protein KaiC;
tigrfam_mainrole Cellular processes;
tigrfam_name circ_KaiC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02655 evalue:0 score:1039.3 best_domain_score:1039.1 name:TIGR02655;
30470 30156 CDS
ID metaerg.pl|05234
allgo_ids GO:0048511; GO:0007623; GO:0042326;
allko_ids K08481;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090672.1 1 104 evalue:1.9e-48 qcov:100.00 identity:98.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF07689;
pfam_desc KaiB domain;
pfam_id KaiB;
pfam_target db:Pfam-A.hmm|PF07689.12 evalue:1.2e-29 score:101.1 best_domain_score:100.9 name:KaiB;
sprot_desc Circadian clock protein KaiB;
sprot_id sp|Q3MEE5|KAIB_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MEE5|KAIB_ANAVT 1 103 evalue:2.9e-48 qcov:99.00 identity:95.10;
tigrfam_acc TIGR02654;
tigrfam_desc circadian clock protein KaiB;
tigrfam_mainrole Cellular processes;
tigrfam_name circ_KaiB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02654 evalue:7.3e-56 score:185.4 best_domain_score:185.2 name:TIGR02654;
30839 30486 CDS
ID metaerg.pl|05235
allgo_ids GO:0006468; GO:0007623;
allko_ids K08480;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090671.1 16 116 evalue:3.7e-45 qcov:86.30 identity:95.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF07688;
pfam_desc KaiA C-terminal domain;
pfam_id KaiA;
pfam_target db:Pfam-A.hmm|PF07688.12 evalue:1.3e-39 score:134.3 best_domain_score:134.1 name:KaiA;
sprot_desc Circadian clock protein KaiA;
sprot_id sp|Q8YT42|KAIA_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YT42|KAIA_NOSS1 17 115 evalue:4.4e-37 qcov:84.60 identity:79.00;
31751 35347 CDS
ID metaerg.pl|05236
allgo_ids GO:0000155; GO:0007165;
allko_ids K07716; K07697; K02489; K07656; K01768; K07640; K07710; K03388; K02668; K10916; K07674; K08479; K11527; K02030; K13587; K10715; K07678; K02480; K02482; K08801; K14489; K07636; K07638; K07653; K07709; K13532; K07644; K01769; K06379; K10681; K07676; K07650; K10942; K13040; K07647; K07675; K07717; K11520; K14509; K07769; K12767; K02486; K11383; K11629; K10125; K11357; K04757; K07639; K08475; K07673; K07641; K13598; K07646; K07652; K00936; K07682; K07649; K07654; K07637; K03407; K07648; K07679; K02478; K07718; K07698; K07651; K11633; K07768; K07778; K11354; K13533; K11328; K07711; K00873; K08884; K02484; K11640; K11356; K11711; K07642; K07643; K11231; K02491; K07677; K07708; K07645; K08282; K07704; K10909;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093899.1 3 1197 evalue:0.0e+00 qcov:99.70 identity:89.80;
kegg_pathway_id 00010; 00710; 05111; 00230; 03090; 00620; 04011; 02020; 00790;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Vibrio cholerae pathogenic cycle; Purine metabolism; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF02518; PF00512; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:6.2e-26 score:90.3 best_domain_score:88.7 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.4e-18 score:65.9 best_domain_score:63.8 name:HisKA; db:Pfam-A.hmm|PF00072.24 evalue:2.1e-09 score:36.7 best_domain_score:30.9 name:Response_reg;
37192 35363 CDS
ID metaerg.pl|05237
allec_ids 2.-.-.-;
allgo_ids GO:0016021; GO:0005886; GO:0000030; GO:0006493;
allko_ids K00728;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090670.1 1 609 evalue:0.0e+00 qcov:100.00 identity:91.50;
kegg_pathway_id 01030;
kegg_pathway_name Glycan structures - biosynthesis 1;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id LPSSYN-PWY; LIPA-CORESYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF13231;
pfam_desc Dolichyl-phosphate-mannose-protein mannosyltransferase;
pfam_id PMT_2;
pfam_target db:Pfam-A.hmm|PF13231.6 evalue:7.7e-15 score:54.7 best_domain_score:54.7 name:PMT_2;
sprot_desc hypothetical protein;
sprot_id sp|O67270|Y1220_AQUAE;
sprot_target db:uniprot_sprot|sp|O67270|Y1220_AQUAE 28 459 evalue:4.7e-29 qcov:70.90 identity:26.40;
tm_num 13;
37192 35363 transmembrane_helix
ID metaerg.pl|05238
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i35423-35491o35672-35740i35774-35842o35852-35920i35957-36016o36026-36079i36113-36172o36257-36325i36386-36445o36458-36514i36575-36643o36686-36754i36773-36841o;
37925 37323 CDS
ID metaerg.pl|05239
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090669.1 1 200 evalue:1.2e-88 qcov:100.00 identity:82.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
sp YES;
tm_num 1;
37323 37394 lipoprotein_signal_peptide
ID metaerg.pl|05240
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
37925 37323 transmembrane_helix
ID metaerg.pl|05241
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i37347-37415o;
38411 38743 CDS
ID metaerg.pl|05242
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198352.1 1 110 evalue:1.7e-47 qcov:100.00 identity:92.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF04483;
pfam_desc Protein of unknown function (DUF565);
pfam_id DUF565;
pfam_target db:Pfam-A.hmm|PF04483.12 evalue:1e-21 score:76.4 best_domain_score:76.4 name:DUF565;
sprot_desc Ycf20-like protein;
sprot_id sp|P72983|YC20L_SYNY3;
sprot_target db:uniprot_sprot|sp|P72983|YC20L_SYNY3 1 110 evalue:9.3e-21 qcov:100.00 identity:46.40;
tm_num 2;
38411 38743 transmembrane_helix
ID metaerg.pl|05243
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i38492-38560o38570-38638i;
38746 39690 CDS
ID metaerg.pl|05244
allec_ids 2.7.1.31;
allgo_ids GO:0009507; GO:0009941; GO:0009570; GO:0005737; GO:0005524; GO:0008887; GO:0009854; GO:0009853;
allko_ids K15918;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090667.1 1 310 evalue:1.4e-163 qcov:98.70 identity:89.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id PWY-181; GLYCOL-GLYOXDEG-PWY; GLYCOLATEMET-PWY;
metacyc_pathway_name photorespiration;; superpathway of glycol metabolism and degradation;; glycolate and glyoxylate degradation I;;
metacyc_pathway_type Photosynthesis;; Alcohol-Degradation; Super-Pathways;; Glycolate-Degradation;;
sprot_desc D-glycerate 3-kinase, chloroplastic;
sprot_id sp|Q944I4|GLYK_ARATH;
sprot_target db:uniprot_sprot|sp|Q944I4|GLYK_ARATH 68 312 evalue:1.7e-27 qcov:78.00 identity:30.50;
40644 39685 CDS
ID metaerg.pl|05245
allgo_ids GO:0000160;
allko_ids K07645; K07708; K07677; K10909; K07704; K08282; K01937; K11231; K02491; K11711; K07642; K00760; K02484; K11356; K11640; K11354; K07778; K07768; K07711; K02478; K07679; K07648; K11623; K07651; K07718; K07654; K07777; K07682; K03407; K07637; K07646; K07641; K07673; K01120; K07639; K08475; K07652; K13761; K11383; K02486; K12767; K07769; K04757; K11617; K11357; K10125; K07647; K07717; K07675; K01769; K07676; K10681; K06379; K07709; K07644; K02482; K02480; K07653; K07636; K11527; K02030; K07678; K10715; K02668; K03388; K08479; K10916; K02489; K07716; K07710; K01768;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090666.1 1 312 evalue:1.2e-149 qcov:97.80 identity:86.50;
kegg_pathway_id 00790; 04011; 02020; 03090; 00230; 05111; 00240; 00983;
kegg_pathway_name Folate biosynthesis; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00990; PF00072;
pfam_desc Diguanylate cyclase, GGDEF domain; Response regulator receiver domain;
pfam_id GGDEF; Response_reg;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:3.3e-51 score:172.5 best_domain_score:171.1 name:GGDEF; db:Pfam-A.hmm|PF00072.24 evalue:5.4e-31 score:106.3 best_domain_score:105.1 name:Response_reg;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:6.4e-51 score:171.5 best_domain_score:170.9 name:TIGR00254;
44970 40651 CDS
ID metaerg.pl|05246
allgo_ids GO:0005515;
allko_ids K00760; K02484; K04486; K11640; K11356; K11711; K07642; K07643; K11231; K01090; K02491; K13490; K07677; K07708; K07645; K01937; K08282; K10909; K07704; K07639; K08475; K07673; K01120; K07641; K07646; K07652; K07649; K07682; K00936; K07777; K07654; K07637; K03407; K07648; K07679; K02478; K07718; K07698; K07651; K07768; K11633; K02575; K07778; K07683; K11354; K13533; K11328; K07711; K00873; K07709; K13532; K07644; K01769; K06379; K10681; K07676; K07650; K13040; K10942; K07647; K07680; K07675; K07717; K11520; K07769; K14509; K12767; K13761; K02486; K11383; K10125; K02342; K11629; K11357; K04757; K07716; K02489; K07697; K07656; K01768; K07710; K07640; K03388; K02668; K10916; K08479; K07674; K11527; K02030; K13587; K10715; K07678; K02480; K02482; K08801; K14489; K07636; K07653; K07638;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093898.1 1 1439 evalue:0.0e+00 qcov:100.00 identity:74.80;
kegg_pathway_id 05111; 00230; 03030; 00240; 00010; 00710; 00983; 00790; 00340; 02020; 04011; 00620; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; DNA replication; Pyrimidine metabolism; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Drug metabolism - other enzymes; Folate biosynthesis; Histidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF03924; PF01590; PF02518; PF00512; PF01627; PF00989; PF08447; PF08448; PF13188; PF13426; PF00072;
pfam_desc CHASE domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Hpt domain; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id CHASE; GAF; HATPase_c; HisKA; Hpt; PAS; PAS_3; PAS_4; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF03924.13 evalue:2.7e-10 score:39.7 best_domain_score:38.5 name:CHASE; db:Pfam-A.hmm|PF01590.26 evalue:2.7e-13 score:50.0 best_domain_score:47.7 name:GAF; db:Pfam-A.hmm|PF02518.26 evalue:2.1e-26 score:91.8 best_domain_score:90.7 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:5.8e-20 score:70.4 best_domain_score:68.6 name:HisKA; db:Pfam-A.hmm|PF01627.23 evalue:1.3e-13 score:50.2 best_domain_score:48.2 name:Hpt; db:Pfam-A.hmm|PF00989.25 evalue:3e-14 score:52.2 best_domain_score:41.4 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:1.1e-23 score:82.5 best_domain_score:44.8 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:3.6e-07 score:29.7 best_domain_score:22.9 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:5.1e-06 score:25.6 best_domain_score:19.5 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:3.6e-25 score:87.5 best_domain_score:75.4 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:3.7e-39 score:132.6 best_domain_score:81.1 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:9.9e-30 score:102.4 best_domain_score:65.4 name:TIGR00229;
tm_num 2;
44970 40651 transmembrane_helix
ID metaerg.pl|05247
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology o40708-40776i41425-41493o;
45263 46975 CDS
ID metaerg.pl|05248
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira sp002368175;
genomedb_acc GCF_002368175.1;
genomedb_target db:genomedb|GCF_002368175.1|WP_096588621.1 1 570 evalue:9.9e-261 qcov:100.00 identity:78.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF13191; PF13401; PF01935; PF08282; PF05116; PF10412;
pfam_desc AAA ATPase domain; AAA domain; Helicase HerA, central domain; haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase; Type IV secretion-system coupling protein DNA-binding domain;
pfam_id AAA_16; AAA_22; DUF87; Hydrolase_3; S6PP; TrwB_AAD_bind;
pfam_target db:Pfam-A.hmm|PF13191.6 evalue:5.6e-09 score:35.8 best_domain_score:33.6 name:AAA_16; db:Pfam-A.hmm|PF13401.6 evalue:2e-06 score:27.3 best_domain_score:25.3 name:AAA_22; db:Pfam-A.hmm|PF01935.17 evalue:3.5e-08 score:33.1 best_domain_score:31.8 name:DUF87; db:Pfam-A.hmm|PF08282.12 evalue:7.5e-28 score:97.2 best_domain_score:50.8 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:1.3e-12 score:47.0 best_domain_score:27.7 name:S6PP; db:Pfam-A.hmm|PF10412.9 evalue:8.7e-06 score:24.1 best_domain_score:22.5 name:TrwB_AAD_bind;
tigrfam_acc TIGR01484;
tigrfam_desc HAD hydrolase, family IIB;
tigrfam_mainrole Unknown function;
tigrfam_name HAD-SF-IIB;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01484 evalue:1e-23 score:83.7 best_domain_score:74.5 name:TIGR01484;
48471 47014 CDS
ID metaerg.pl|05249
allec_ids 2.7.7.-;
allgo_ids GO:0005524; GO:0000287; GO:0016779;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198356.1 1 485 evalue:1.6e-264 qcov:100.00 identity:91.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id PWY-882; THISYN-PWY; PWY-5354; PWY4FS-4; PWY-6476; PHOSLIPSYN2-PWY;
metacyc_pathway_name L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of thiamine diphosphate biosynthesis I;; ; phosphatidylcholine biosynthesis IV;; cytidylyl molybdenum cofactor biosynthesis;; superpathway of phospholipid biosynthesis II (plants);;
metacyc_pathway_type Ascorbate-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;; ; PhosphatidylcholineBiosynthesis;; Cofactor-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;;
pfam_acc PF02696;
pfam_desc Uncharacterized ACR, YdiU/UPF0061 family;
pfam_id UPF0061;
pfam_target db:Pfam-A.hmm|PF02696.14 evalue:2.9e-215 score:714.7 best_domain_score:714.5 name:UPF0061;
sprot_desc hypothetical protein;
sprot_id sp|Q3MED4|SELO_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MED4|SELO_ANAVT 1 483 evalue:8.6e-228 qcov:99.60 identity:78.50;
48623 49831 CDS
ID metaerg.pl|05250
allec_ids 2.7.1.170;
allgo_ids GO:0005524; GO:0006040; GO:0009254; GO:0016773; GO:0016301; GO:0097175; GO:0005975;
allko_ids K09001;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090662.1 1 401 evalue:1.5e-210 qcov:99.80 identity:91.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF03702;
pfam_desc Anhydro-N-acetylmuramic acid kinase;
pfam_id AnmK;
pfam_target db:Pfam-A.hmm|PF03702.14 evalue:4.5e-102 score:341.1 best_domain_score:340.1 name:AnmK;
sprot_desc Anhydro-N-acetylmuramic acid kinase;
sprot_id sp|Q3M7P3|ANMK_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M7P3|ANMK_ANAVT 11 396 evalue:4.7e-171 qcov:96.00 identity:76.90;
50066 50605 CDS
ID metaerg.pl|05251
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090661.1 22 169 evalue:1.2e-79 qcov:82.70 identity:94.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
50787 52352 CDS
ID metaerg.pl|05252
allec_ids 2.7.11.1;
allgo_ids GO:0004672; GO:0005524; GO:0006468; GO:0004674;
allko_ids K05102; K08282; K05103; K08848; K05105; K04444; K08846; K05744; K11912; K08790; K11228; K08897; K07778; K07683; K08810; K05113; K08884; K05111; K04442; K11623; K07682; K04424; K05743; K00924; K13302; K03407; K11265; K07673; K04688; K12767; K13414; K02486; K13303; K05121; K13304; K07675; K08841; K08847; K04443; K04367; K04372; K02480; K02482; K05091; K04445; K05097; K05096; K08792; K04373; K08809; K05112; K05098; K04421; K04420; K01768; K08286; K12132;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093896.1 1 521 evalue:4.8e-270 qcov:100.00 identity:90.60;
kegg_pathway_id 04011; 04010; 02020; 04150; 04640; 04530; 04360; 04510; 00230;
kegg_pathway_name MAPK signaling pathway - yeast; MAPK signaling pathway; Two-component system - General; mTOR signaling pathway; Hematopoietic cell lineage; Tight junction; Axon guidance; Focal adhesion; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF01636; PF00069; PF07714;
pfam_desc Phosphotransferase enzyme family; Protein kinase domain; Protein tyrosine kinase;
pfam_id APH; Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:8.3e-07 score:28.4 best_domain_score:15.9 name:APH; db:Pfam-A.hmm|PF00069.25 evalue:3e-42 score:144.0 best_domain_score:143.5 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:1.6e-30 score:105.5 best_domain_score:104.9 name:Pkinase_Tyr;
sprot_desc Serine/threonine-protein kinase A;
sprot_id sp|Q9FAB3|SPKA_SYNY3;
sprot_target db:uniprot_sprot|sp|Q9FAB3|SPKA_SYNY3 8 520 evalue:3.7e-136 qcov:98.50 identity:48.70;
53282 53085 CDS
ID metaerg.pl|05253
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090660.1 1 65 evalue:5.6e-27 qcov:100.00 identity:100.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF04485;
pfam_desc Phycobilisome degradation protein nblA;
pfam_id NblA;
pfam_target db:Pfam-A.hmm|PF04485.12 evalue:8.3e-25 score:86.2 best_domain_score:86.0 name:NblA;
54644 53904 CDS
ID metaerg.pl|05254
allec_ids 3.1.3.16;
allgo_ids GO:0003824; GO:0004724; GO:0046872; GO:0004722; GO:0030435;
allko_ids K01090; K11915; K20074;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090658.1 1 244 evalue:4.0e-126 qcov:99.20 identity:91.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00481; PF13672; PF07228;
pfam_desc Protein phosphatase 2C; Protein phosphatase 2C; Stage II sporulation protein E (SpoIIE);
pfam_id PP2C; PP2C_2; SpoIIE;
pfam_target db:Pfam-A.hmm|PF00481.21 evalue:4.7e-11 score:42.0 best_domain_score:31.4 name:PP2C; db:Pfam-A.hmm|PF13672.6 evalue:1.4e-22 score:79.6 best_domain_score:79.1 name:PP2C_2; db:Pfam-A.hmm|PF07228.12 evalue:4.5e-11 score:42.3 best_domain_score:41.0 name:SpoIIE;
sprot_desc hypothetical protein;
sprot_id sp|O34779|PRPC_BACSU;
sprot_target db:uniprot_sprot|sp|O34779|PRPC_BACSU 9 240 evalue:6.0e-36 qcov:94.30 identity:36.00;
56345 54660 CDS
ID metaerg.pl|05255
allgo_ids GO:0005524; GO:0004672;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090657.1 1 561 evalue:0.0e+00 qcov:100.00 identity:98.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF03109;
pfam_desc ABC1 family;
pfam_id ABC1;
pfam_target db:Pfam-A.hmm|PF03109.16 evalue:3.4e-39 score:132.9 best_domain_score:132.0 name:ABC1;
sprot_desc hypothetical protein;
sprot_id sp|P73627|Y1770_SYNY3;
sprot_target db:uniprot_sprot|sp|P73627|Y1770_SYNY3 10 561 evalue:1.9e-226 qcov:98.40 identity:68.60;
tm_num 2;
56345 54660 transmembrane_helix
ID metaerg.pl|05256
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i56175-56234o56244-56312i;
56787 56461 CDS
ID metaerg.pl|05257
allgo_ids GO:0031977;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090656.1 1 108 evalue:9.0e-46 qcov:100.00 identity:94.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
sprot_desc Probable thylakoid lumen protein sll1769;
sprot_id sp|P73628|Y1769_SYNY3;
sprot_target db:uniprot_sprot|sp|P73628|Y1769_SYNY3 1 106 evalue:2.8e-17 qcov:98.10 identity:48.10;
57481 58287 CDS
ID metaerg.pl|05258
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfobulbaceae;g__Desulfobulbus_A;s__Desulfobulbus_A japonicus;
genomedb_acc GCF_000429945.1;
genomedb_target db:genomedb|GCF_000429945.1|WP_051309244.1 3 256 evalue:2.2e-56 qcov:94.80 identity:45.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
58501 60282 CDS
ID metaerg.pl|05259
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K08855; K08282; K08856; K08333; K08790; K08854; K11228; K04444; K04442; K11623; K08810; K08884; K07683; K07673; K11265; K03407; K07682; K13302; K07675; K13303; K13304; K04688; K13414; K02486; K08853; K04372; K04443; K05097; K05096; K04445; K02480; K01768; K08286; K04421; K04420; K05098; K08809; K04373; K08792;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc commune;
genomedb_acc GCF_003113895.1;
genomedb_target db:genomedb|GCF_003113895.1|WP_109008411.1 5 592 evalue:1.5e-219 qcov:99.20 identity:67.10;
kegg_pathway_id 04011; 04140; 04010; 02020; 04150; 04510; 00230;
kegg_pathway_name MAPK signaling pathway - yeast; Regulation of autophagy; MAPK signaling pathway; Two-component system - General; mTOR signaling pathway; Focal adhesion; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF01636; PF00069; PF07714;
pfam_desc Phosphotransferase enzyme family; Protein kinase domain; Protein tyrosine kinase;
pfam_id APH; Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:8.3e-07 score:28.4 best_domain_score:27.4 name:APH; db:Pfam-A.hmm|PF00069.25 evalue:7.4e-32 score:110.0 best_domain_score:109.6 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:2.1e-14 score:52.7 best_domain_score:52.1 name:Pkinase_Tyr;
tm_num 6;
58501 60282 transmembrane_helix
ID metaerg.pl|05260
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology o59674-59742i59755-59823o59866-59934i59971-60039o60082-60150i60154-60222o;
60452 61132 CDS
ID metaerg.pl|05261
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090654.1 1 226 evalue:2.1e-121 qcov:100.00 identity:93.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF05685;
pfam_desc Putative restriction endonuclease;
pfam_id Uma2;
pfam_target db:Pfam-A.hmm|PF05685.12 evalue:8.2e-27 score:93.1 best_domain_score:91.8 name:Uma2;
61921 61346 CDS
ID metaerg.pl|05262
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090653.1 1 191 evalue:6.6e-100 qcov:100.00 identity:95.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF05685;
pfam_desc Putative restriction endonuclease;
pfam_id Uma2;
pfam_target db:Pfam-A.hmm|PF05685.12 evalue:2.1e-31 score:108.0 best_domain_score:107.7 name:Uma2;
sprot_desc hypothetical protein;
sprot_id sp|P73844|Y1609_SYNY3;
sprot_target db:uniprot_sprot|sp|P73844|Y1609_SYNY3 1 168 evalue:1.6e-31 qcov:88.00 identity:41.10;
64649 61947 CDS
ID metaerg.pl|05263
allec_ids 2.7.7.-;
allgo_ids GO:0003723; GO:0006396; GO:0016779;
allko_ids K02000; K11527; K01697; K02806; K00970; K00974; K00088; K05847; K00641;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090652.1 3 900 evalue:0.0e+00 qcov:99.80 identity:94.40;
kegg_pathway_id 00260; 00230; 00983; 00271; 00920; 02060; 02010; 00450;
kegg_pathway_name Glycine, serine and threonine metabolism; Purine metabolism; Drug metabolism - other enzymes; Methionine metabolism; Sulfur metabolism; Phosphotransferase system (PTS); ABC transporters - General; Selenoamino acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id PWY4FS-4; PHOSLIPSYN2-PWY; PWY-6476; PWY-5354; THISYN-PWY; PWY-882;
metacyc_pathway_name phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; cytidylyl molybdenum cofactor biosynthesis;; ; superpathway of thiamine diphosphate biosynthesis I;; L-ascorbate biosynthesis I (L-galactose pathway);;
metacyc_pathway_type PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Cofactor-Biosynthesis;; ; Super-Pathways; Thiamine-Biosynthesis;; Ascorbate-Biosynthesis;;
pfam_acc PF00571; PF01368; PF01743; PF12627;
pfam_desc CBS domain; DHH family; Poly A polymerase head domain; Probable RNA and SrmB- binding site of polymerase A;
pfam_id CBS; DHH; PolyA_pol; PolyA_pol_RNAbd;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:5e-25 score:87.0 best_domain_score:46.1 name:CBS; db:Pfam-A.hmm|PF01368.20 evalue:1.2e-08 score:34.4 best_domain_score:32.9 name:DHH; db:Pfam-A.hmm|PF01743.20 evalue:2.3e-33 score:114.5 best_domain_score:113.1 name:PolyA_pol; db:Pfam-A.hmm|PF12627.7 evalue:2.8e-05 score:23.0 best_domain_score:18.9 name:PolyA_pol_RNAbd;
sprot_desc A-adding tRNA nucleotidyltransferase;
sprot_id sp|P74081|AATNT_SYNY3;
sprot_target db:uniprot_sprot|sp|P74081|AATNT_SYNY3 3 899 evalue:3.4e-294 qcov:99.70 identity:57.80;
64873 65061 CDS
ID metaerg.pl|05264
allgo_ids GO:0009523; GO:0009539; GO:0015979; GO:0042549; GO:0016021; GO:0042651;
allko_ids K02724;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090651.1 1 62 evalue:1.4e-22 qcov:100.00 identity:96.80;
kegg_pathway_id 00195;
kegg_pathway_name Photosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF01737;
pfam_desc YCF9;
pfam_id Ycf9;
pfam_target db:Pfam-A.hmm|PF01737.17 evalue:5.1e-28 score:96.0 best_domain_score:95.8 name:Ycf9;
sprot_desc Photosystem II reaction center protein Z;
sprot_id sp|Q8YQ44|PSBZ_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YQ44|PSBZ_NOSS1 1 62 evalue:1.1e-23 qcov:100.00 identity:91.90;
tigrfam_acc TIGR03043;
tigrfam_desc photosystem II core protein PsbZ;
tigrfam_mainrole Energy metabolism;
tigrfam_name PS_II_psbZ;
tigrfam_sub1role Photosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR03043 evalue:4.7e-26 score:89.6 best_domain_score:89.5 name:TIGR03043;
tm_num 2;
64873 65061 transmembrane_helix
ID metaerg.pl|05265
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i64891-64959o64987-65055i;
65234 65812 CDS
ID metaerg.pl|05266
allec_ids 2.5.1.78;
allgo_ids GO:0009231; GO:0009349; GO:0000906;
allko_ids K00794;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090650.1 1 192 evalue:1.3e-103 qcov:100.00 identity:97.40;
kegg_pathway_id 00740;
kegg_pathway_name Riboflavin metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id RIBOSYN2-PWY; PWY-6167; PWY-6168;
metacyc_pathway_name flavin biosynthesis I (bacteria and plants);; flavin biosynthesis II (archaea);; flavin biosynthesis III (fungi);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00885;
pfam_desc 6,7-dimethyl-8-ribityllumazine synthase;
pfam_id DMRL_synthase;
pfam_target db:Pfam-A.hmm|PF00885.19 evalue:1e-54 score:183.4 best_domain_score:183.1 name:DMRL_synthase;
sprot_desc 6,7-dimethyl-8-ribityllumazine synthase;
sprot_id sp|Q8YQ43|RISB_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YQ43|RISB_NOSS1 1 191 evalue:3.0e-91 qcov:99.50 identity:85.90;
tigrfam_acc TIGR00114;
tigrfam_desc 6,7-dimethyl-8-ribityllumazine synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name lumazine-synth;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00114 evalue:1.7e-53 score:179.6 best_domain_score:179.3 name:TIGR00114;
65910 65981 tRNA
ID metaerg.pl|05267
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
name tRNA_Gly_gcc;
66237 66644 CDS
ID metaerg.pl|05268
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093895.1 1 135 evalue:1.6e-68 qcov:100.00 identity:95.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
tm_num 2;
66237 66644 transmembrane_helix
ID metaerg.pl|05269
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i66471-66539o66567-66635i;
66649 67914 CDS
ID metaerg.pl|05270
allec_ids 1.2.1.41;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0004350; GO:0050661; GO:0055129;
allko_ids K00147;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006199122.1 1 421 evalue:6.3e-228 qcov:100.00 identity:96.20;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id PWY-5004; CITRULBIO-PWY; PROSYN-PWY;
metacyc_pathway_name superpathway of L-citrulline metabolism;; L-citrulline biosynthesis;; L-proline biosynthesis I;;
metacyc_pathway_type Citrulline-Biosynthesis; Super-Pathways;; Citrulline-Biosynthesis;; PROLINE-SYN;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:2.5e-16 score:58.5 best_domain_score:39.5 name:Aldedh;
sprot_desc Gamma-glutamyl phosphate reductase 2;
sprot_id sp|Q55167|PROA2_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55167|PROA2_SYNY3 19 420 evalue:4.0e-120 qcov:95.50 identity:54.80;
69532 68462 CDS
ID metaerg.pl|05271
allec_ids 1.14.19.-;
allgo_ids GO:0006629; GO:0031969; GO:0016717; GO:0006636;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006199120.1 1 352 evalue:6.3e-205 qcov:98.90 identity:94.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id PWY-5997; PWY-5353; PWY-5998;
metacyc_pathway_name α-linolenate biosynthesis I (plants and red algae);; arachidonate biosynthesis I (6-desaturase, lower eukaryotes);; γ-linolenate biosynthesis I (plants);;
metacyc_pathway_type Alpha-Linolenate-Biosynthesis;; Arachidonate-Biosynthesis;; Gamma-linolenate-Biosynthesis;;
pfam_acc PF00487;
pfam_desc Fatty acid desaturase;
pfam_id FA_desaturase;
pfam_target db:Pfam-A.hmm|PF00487.24 evalue:1.9e-36 score:125.4 best_domain_score:125.0 name:FA_desaturase;
sprot_desc Omega-3 fatty acid desaturase, chloroplastic;
sprot_id sp|P48621|FAD3C_SOYBN;
sprot_target db:uniprot_sprot|sp|P48621|FAD3C_SOYBN 24 355 evalue:2.1e-106 qcov:93.30 identity:53.40;
tm_num 4;
69532 68462 transmembrane_helix
ID metaerg.pl|05272
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i68603-68656o68669-68737i69065-69124o69152-69211i;
70905 69853 CDS
ID metaerg.pl|05273
allec_ids 1.14.19.6;
allgo_ids GO:0006629; GO:0016021; GO:0005886; GO:0102985; GO:0006636;
allko_ids K10255;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090645.1 1 350 evalue:2.8e-197 qcov:100.00 identity:90.90;
kegg_pathway_id 02020; 01040;
kegg_pathway_name Two-component system - General; Biosynthesis of unsaturated fatty acids;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id PWY-5995; PWY-6001;
metacyc_pathway_name linoleate biosynthesis I (plants);; linoleate biosynthesis II (animals);;
metacyc_pathway_type Linoleate-Biosynthesis;; Linoleate-Biosynthesis;;
pfam_acc PF00487;
pfam_desc Fatty acid desaturase;
pfam_id FA_desaturase;
pfam_target db:Pfam-A.hmm|PF00487.24 evalue:1.2e-35 score:122.9 best_domain_score:122.9 name:FA_desaturase;
sprot_desc Delta(12)-fatty-acid desaturase;
sprot_id sp|P20388|DESA_SYNY3;
sprot_target db:uniprot_sprot|sp|P20388|DESA_SYNY3 19 343 evalue:2.0e-125 qcov:92.90 identity:61.50;
tm_num 3;
70905 69853 transmembrane_helix
ID metaerg.pl|05274
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i69988-70047o70057-70110i70438-70506o;
71960 71142 CDS
ID metaerg.pl|05275
allec_ids 1.14.19.42;
allgo_ids GO:0006629; GO:0031969; GO:0005789; GO:0016021; GO:0009579; GO:0009979; GO:0016717; GO:0031408; GO:0010205; GO:0006636;
allko_ids K20416;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006199118.1 1 272 evalue:1.7e-157 qcov:100.00 identity:92.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00487;
pfam_desc Fatty acid desaturase;
pfam_id FA_desaturase;
pfam_target db:Pfam-A.hmm|PF00487.24 evalue:4.8e-13 score:48.8 best_domain_score:48.8 name:FA_desaturase;
sprot_desc Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic;
sprot_id sp|Q949X0|ADS3_ARATH;
sprot_target db:uniprot_sprot|sp|Q949X0|ADS3_ARATH 16 272 evalue:1.7e-76 qcov:94.50 identity:50.20;
tm_num 4;
71960 71142 transmembrane_helix
ID metaerg.pl|05276
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i71178-71234o71262-71330i71367-71426o71604-71672i;
72046 73278 CDS
ID metaerg.pl|05277
allgo_ids GO:0030170; GO:0003824;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090643.1 1 406 evalue:9.7e-234 qcov:99.00 identity:98.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF01053; PF06838;
pfam_desc Cys/Met metabolism PLP-dependent enzyme; Methionine gamma-lyase;
pfam_id Cys_Met_Meta_PP; Met_gamma_lyase;
pfam_target db:Pfam-A.hmm|PF01053.20 evalue:6.5e-09 score:34.0 best_domain_score:33.0 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF06838.11 evalue:8.8e-205 score:679.1 best_domain_score:678.9 name:Met_gamma_lyase;
sprot_desc hypothetical protein;
sprot_id sp|P94479|YNBB_BACSU;
sprot_target db:uniprot_sprot|sp|P94479|YNBB_BACSU 9 406 evalue:1.2e-110 qcov:97.10 identity:47.60;
73316 73693 CDS
ID metaerg.pl|05278
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197667.1 1 125 evalue:1.4e-58 qcov:100.00 identity:97.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF13366;
pfam_desc PD-(D/E)XK nuclease superfamily;
pfam_id PDDEXK_3;
pfam_target db:Pfam-A.hmm|PF13366.6 evalue:1.3e-43 score:147.3 best_domain_score:147.1 name:PDDEXK_3;
tigrfam_acc TIGR04256;
tigrfam_desc GxxExxY protein;
tigrfam_name GxxExxY;
tigrfam_target db:TIGRFAMs.hmm|TIGR04256 evalue:1.8e-44 score:150.0 best_domain_score:149.8 name:TIGR04256;
74931 73738 CDS
ID metaerg.pl|05279
allko_ids K00443; K00122; K00441; K00125; K00226; K21231;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197666.1 1 397 evalue:1.3e-227 qcov:100.00 identity:98.70;
kegg_pathway_id 00630; 00240; 00790; 00680;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Pyrimidine metabolism; Folate biosynthesis; Methane metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF04432; PF04422;
pfam_desc Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term;
pfam_id FrhB_FdhB_C; FrhB_FdhB_N;
pfam_target db:Pfam-A.hmm|PF04432.13 evalue:6.3e-38 score:129.3 best_domain_score:128.1 name:FrhB_FdhB_C; db:Pfam-A.hmm|PF04422.13 evalue:3.7e-25 score:87.1 best_domain_score:86.4 name:FrhB_FdhB_N;
sprot_desc hypothetical protein;
sprot_id sp|P46015|Y1601_NOSS1;
sprot_target db:uniprot_sprot|sp|P46015|Y1601_NOSS1 1 397 evalue:1.6e-208 qcov:100.00 identity:88.70;
75214 75423 CDS
ID metaerg.pl|05280
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Rivularia;s__Rivularia sp002361335;
genomedb_acc GCA_002361335.1;
genomedb_target db:genomedb|GCA_002361335.1|DESS01000359.1_14 6 69 evalue:5.2e-15 qcov:92.80 identity:78.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
sp YES;
tm_num 2;
75214 75330 signal_peptide
ID metaerg.pl|05281
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
75214 75423 transmembrane_helix
ID metaerg.pl|05282
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i75250-75309o75337-75405i;
75469 75708 CDS
ID metaerg.pl|05283
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira sp002154695;
genomedb_acc GCF_002154695.1;
genomedb_target db:genomedb|GCF_002154695.1|WP_086687797.1 1 74 evalue:3.1e-19 qcov:93.70 identity:78.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
sp YES;
tm_num 2;
75469 75570 signal_peptide
ID metaerg.pl|05284
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
75469 75708 transmembrane_helix
ID metaerg.pl|05285
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i75505-75573o75601-75669i;
75689 76063 CDS
ID metaerg.pl|05286
allgo_ids GO:0003676; GO:0004519;
casgene_acc cas9_archaeal;
casgene_name Cas9_archaeal;
casgene_target db:casgenes.hmm|cas9_archaeal evalue:2.2e-06 score:25.7 best_domain_score:25.7 name:Cas9_archaeal;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae_A;g__UBA11371;s__UBA11371 sp003486305;
genomedb_acc GCA_003486305.1;
genomedb_target db:genomedb|GCA_003486305.1|HAZ43255.1 1 124 evalue:7.2e-39 qcov:100.00 identity:65.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF01844; PF13395; PF14279;
pfam_desc HNH endonuclease; HNH endonuclease; HNH endonuclease;
pfam_id HNH; HNH_4; HNH_5;
pfam_target db:Pfam-A.hmm|PF01844.23 evalue:1.2e-14 score:53.4 best_domain_score:52.8 name:HNH; db:Pfam-A.hmm|PF13395.6 evalue:1.6e-06 score:27.2 best_domain_score:26.2 name:HNH_4; db:Pfam-A.hmm|PF14279.6 evalue:1.1e-13 score:50.1 best_domain_score:49.3 name:HNH_5;
76303 77049 CDS
ID metaerg.pl|05287
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090640.1 1 248 evalue:1.2e-74 qcov:100.00 identity:64.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
sp YES;
76303 76392 lipoprotein_signal_peptide
ID metaerg.pl|05288
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
77056 78831 CDS
ID metaerg.pl|05289
allgo_ids GO:0005515;
allko_ids K01062; K15864; K02037; K01520; K00368; K02033; K08333; K08282; K12736;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197664.1 1 591 evalue:2.3e-292 qcov:100.00 identity:88.80;
kegg_pathway_id 00565; 00240; 04140; 00910; 02010;
kegg_pathway_name Ether lipid metabolism; Pyrimidine metabolism; Regulation of autophagy; Nitrogen metabolism; ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF12894; PF00226; PF16529; PF08801; PF11715; PF07676; PF00400;
pfam_desc Anaphase-promoting complex subunit 4 WD40 domain; DnaJ domain; WD40 region of Ge1, enhancer of mRNA-decapping protein; Nup133 N terminal like; Nucleoporin Nup120/160; WD40-like Beta Propeller Repeat; WD domain, G-beta repeat;
pfam_id ANAPC4_WD40; DnaJ; Ge1_WD40; Nucleoporin_N; Nup160; PD40; WD40;
pfam_target db:Pfam-A.hmm|PF12894.7 evalue:4.4e-19 score:67.8 best_domain_score:18.1 name:ANAPC4_WD40; db:Pfam-A.hmm|PF00226.31 evalue:3.4e-12 score:45.6 best_domain_score:43.8 name:DnaJ; db:Pfam-A.hmm|PF16529.5 evalue:1.2e-11 score:43.4 best_domain_score:12.0 name:Ge1_WD40; db:Pfam-A.hmm|PF08801.11 evalue:6.2e-07 score:27.7 best_domain_score:16.5 name:Nucleoporin_N; db:Pfam-A.hmm|PF11715.8 evalue:2e-07 score:29.3 best_domain_score:9.8 name:Nup160; db:Pfam-A.hmm|PF07676.12 evalue:6.7e-06 score:25.2 best_domain_score:7.1 name:PD40; db:Pfam-A.hmm|PF00400.32 evalue:3.5e-50 score:166.1 best_domain_score:33.4 name:WD40;
tm_num 4;
77056 78831 transmembrane_helix
ID metaerg.pl|05290
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology o77083-77151i77164-77232o77260-77328i77347-77415o;
79734 81200 CDS
ID metaerg.pl|05291
allec_ids 3.2.1.26;
allgo_ids GO:0033926; GO:0005739; GO:0004575; GO:0007623; GO:0010029; GO:0048510; GO:0005987;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197663.1 1 488 evalue:1.3e-285 qcov:100.00 identity:96.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id SUCUTIL-PWY; PWY-621;
metacyc_pathway_name sucrose degradation I (sucrose phosphotransferase);; sucrose degradation III (sucrose invertase);;
metacyc_pathway_type SUCROSE-DEG;; SUCROSE-DEG;;
pfam_acc PF06202; PF12899;
pfam_desc Amylo-alpha-1,6-glucosidase ; Alkaline and neutral invertase;
pfam_id GDE_C; Glyco_hydro_100;
pfam_target db:Pfam-A.hmm|PF06202.14 evalue:0.00014 score:20.2 best_domain_score:10.5 name:GDE_C; db:Pfam-A.hmm|PF12899.7 evalue:4.3e-215 score:713.6 best_domain_score:713.4 name:Glyco_hydro_100;
sprot_desc Alkaline/neutral invertase C, mitochondrial;
sprot_id sp|B9DFA8|INVC_ARATH;
sprot_target db:uniprot_sprot|sp|B9DFA8|INVC_ARATH 7 465 evalue:4.4e-155 qcov:94.10 identity:54.40;
81566 82981 CDS
ID metaerg.pl|05292
allec_ids 3.2.1.26;
allgo_ids GO:0033926; GO:0005739; GO:0004575; GO:0042542; GO:0048364; GO:0005987;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197662.1 1 471 evalue:3.7e-269 qcov:100.00 identity:95.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id PWY-621; SUCUTIL-PWY;
metacyc_pathway_name sucrose degradation III (sucrose invertase);; sucrose degradation I (sucrose phosphotransferase);;
metacyc_pathway_type SUCROSE-DEG;; SUCROSE-DEG;;
pfam_acc PF06202; PF12899;
pfam_desc Amylo-alpha-1,6-glucosidase ; Alkaline and neutral invertase;
pfam_id GDE_C; Glyco_hydro_100;
pfam_target db:Pfam-A.hmm|PF06202.14 evalue:7.7e-09 score:34.2 best_domain_score:27.2 name:GDE_C; db:Pfam-A.hmm|PF12899.7 evalue:4.4e-212 score:703.7 best_domain_score:703.5 name:Glyco_hydro_100;
sprot_desc Alkaline/neutral invertase A, mitochondrial;
sprot_id sp|Q9FXA8|INVA_ARATH;
sprot_target db:uniprot_sprot|sp|Q9FXA8|INVA_ARATH 13 463 evalue:2.5e-147 qcov:95.80 identity:55.50;
83556 83050 CDS
ID metaerg.pl|05293
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197661.1 1 168 evalue:7.1e-66 qcov:100.00 identity:81.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
sp YES;
83050 83157 signal_peptide
ID metaerg.pl|05294
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
83734 85083 CDS
ID metaerg.pl|05295
allec_ids 2.1.1.176;
allgo_ids GO:0008168; GO:0005829; GO:0003723; GO:0009383; GO:0006355; GO:0070475;
allko_ids K03500;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090634.1 1 449 evalue:9.6e-259 qcov:100.00 identity:97.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF13847; PF01189; PF01029;
pfam_desc Methyltransferase domain; 16S rRNA methyltransferase RsmB/F; NusB family;
pfam_id Methyltransf_31; Methyltr_RsmB-F; NusB;
pfam_target db:Pfam-A.hmm|PF13847.6 evalue:3.4e-07 score:29.4 best_domain_score:28.3 name:Methyltransf_31; db:Pfam-A.hmm|PF01189.17 evalue:5.2e-65 score:218.1 best_domain_score:217.5 name:Methyltr_RsmB-F; db:Pfam-A.hmm|PF01029.18 evalue:1.4e-27 score:95.8 best_domain_score:95.1 name:NusB;
sprot_desc Probable ribosomal RNA small subunit methyltransferase B;
sprot_id sp|P72943|RSMB_SYNY3;
sprot_target db:uniprot_sprot|sp|P72943|RSMB_SYNY3 1 445 evalue:1.0e-121 qcov:99.10 identity:52.30;
tigrfam_acc TIGR00563;
tigrfam_desc 16S rRNA (cytosine(967)-C(5))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name rsmB;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00563 evalue:2.5e-137 score:457.7 best_domain_score:457.5 name:TIGR00563;
85080 85565 CDS
ID metaerg.pl|05296
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_042202572.1 22 161 evalue:2.1e-70 qcov:87.00 identity:95.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF05099;
pfam_desc Tellurite resistance protein TerB;
pfam_id TerB;
pfam_target db:Pfam-A.hmm|PF05099.13 evalue:6.9e-08 score:31.8 best_domain_score:16.0 name:TerB;
86007 85780 CDS
ID metaerg.pl|05297
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090632.1 1 75 evalue:2.3e-32 qcov:100.00 identity:96.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
tm_num 1;
86007 85780 transmembrane_helix
ID metaerg.pl|05298
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology o85837-85905i;
86209 86622 CDS
ID metaerg.pl|05299
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197657.1 1 137 evalue:4.6e-71 qcov:100.00 identity:98.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF01894;
pfam_desc Uncharacterised protein family UPF0047;
pfam_id UPF0047;
pfam_target db:Pfam-A.hmm|PF01894.17 evalue:5.4e-41 score:138.6 best_domain_score:138.4 name:UPF0047;
sprot_desc hypothetical protein;
sprot_id sp|P74125|Y1880_SYNY3;
sprot_target db:uniprot_sprot|sp|P74125|Y1880_SYNY3 4 136 evalue:2.7e-46 qcov:97.10 identity:64.90;
tigrfam_acc TIGR00149;
tigrfam_desc secondary thiamine-phosphate synthase enzyme;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00149_YjbQ;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00149 evalue:8.8e-48 score:160.5 best_domain_score:160.4 name:TIGR00149;
86822 87574 CDS
ID metaerg.pl|05300
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090630.1 1 249 evalue:5.4e-126 qcov:99.60 identity:88.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
87571 88230 CDS
ID metaerg.pl|05301
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0009507; GO:0009941; GO:0009534; GO:0009535; GO:0010287;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090629.1 1 219 evalue:4.4e-108 qcov:100.00 identity:92.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF01073; PF01370; PF13460; PF05368;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; NAD(P)H-binding ; NmrA-like family;
pfam_id 3Beta_HSD; Epimerase; NAD_binding_10; NmrA;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:6.2e-11 score:41.0 best_domain_score:40.3 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:4.9e-11 score:41.8 best_domain_score:39.4 name:Epimerase; db:Pfam-A.hmm|PF13460.6 evalue:1.7e-46 score:157.7 best_domain_score:157.4 name:NAD_binding_10; db:Pfam-A.hmm|PF05368.13 evalue:6.1e-19 score:67.7 best_domain_score:67.4 name:NmrA;
sprot_desc hypothetical protein;
sprot_id sp|Q8H124|Y2446_ARATH;
sprot_target db:uniprot_sprot|sp|Q8H124|Y2446_ARATH 2 218 evalue:2.5e-49 qcov:99.10 identity:50.00;
88392 89090 CDS
ID metaerg.pl|05302
allgo_ids GO:0003796; GO:0009253; GO:0016998;
allko_ids K01185; K11331;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093893.1 15 232 evalue:2.7e-116 qcov:94.00 identity:93.10;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00959;
pfam_desc Phage lysozyme;
pfam_id Phage_lysozyme;
pfam_target db:Pfam-A.hmm|PF00959.19 evalue:3.5e-20 score:71.7 best_domain_score:71.3 name:Phage_lysozyme;
tm_num 1;
88392 89090 transmembrane_helix
ID metaerg.pl|05303
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i88428-88487o;
89976 89131 CDS
ID metaerg.pl|05304
allec_ids 4.2.99.20;
allgo_ids GO:0070205; GO:0009234;
allko_ids K08680;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197653.1 1 281 evalue:1.7e-133 qcov:100.00 identity:84.00;
kegg_pathway_id 00130;
kegg_pathway_name Ubiquinone biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id PWY-5791; PWY-5860; PWY-5845; PWY-5862; PWY-5896; PWY-5899; PWY-5863; PWY-5850; PWY-5898; PWY-5861; PWY-5838; PWY-5840; PWY-5837; ALL-CHORISMATE-PWY; PWY-5897;
metacyc_pathway_name ; superpathway of demethylmenaquinol-6 biosynthesis I;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-13 biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-12 biosynthesis;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-8 biosynthesis I;; superpathway of menaquinol-7 biosynthesis;; 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of chorismate metabolism;; superpathway of menaquinol-11 biosynthesis;;
metacyc_pathway_type ; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; DHNA-Biosynthesis;; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF00561; PF12697; PF00756; PF12146; PF03096;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Putative esterase; Serine aminopeptidase, S33; Ndr family;
pfam_id Abhydrolase_1; Abhydrolase_6; Esterase; Hydrolase_4; Ndr;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:2.4e-23 score:82.3 best_domain_score:81.9 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:5.2e-15 score:55.9 best_domain_score:55.6 name:Abhydrolase_6; db:Pfam-A.hmm|PF00756.20 evalue:5.8e-06 score:25.4 best_domain_score:25.0 name:Esterase; db:Pfam-A.hmm|PF12146.8 evalue:4.7e-15 score:54.7 best_domain_score:52.1 name:Hydrolase_4; db:Pfam-A.hmm|PF03096.14 evalue:2.1e-07 score:29.2 best_domain_score:28.7 name:Ndr;
sprot_desc Putative 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase;
sprot_id sp|P23974|MENH_BACSU;
sprot_target db:uniprot_sprot|sp|P23974|MENH_BACSU 21 267 evalue:5.3e-36 qcov:87.90 identity:34.40;
tigrfam_acc TIGR03695;
tigrfam_desc 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name menH_SHCHC;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR03695 evalue:1e-84 score:283.0 best_domain_score:282.8 name:TIGR03695;
91746 90046 CDS
ID metaerg.pl|05305
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0032300; GO:0016887;
allko_ids K07654; K03407; K07673; K07641; K07646; K08282; K07642; K08801; K07636; K07653; K07674; K01768; K04757; K06379; K03572;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090625.1 1 566 evalue:6.5e-305 qcov:100.00 identity:92.80;
kegg_pathway_id 03430; 02020; 00230;
kegg_pathway_name Mismatch repair; Two-component system - General; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF01119; PF02518; PF13589; PF08676;
pfam_desc DNA mismatch repair protein, C-terminal domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain;
pfam_id DNA_mis_repair; HATPase_c; HATPase_c_3; MutL_C;
pfam_target db:Pfam-A.hmm|PF01119.19 evalue:3.4e-23 score:80.8 best_domain_score:80.0 name:DNA_mis_repair; db:Pfam-A.hmm|PF02518.26 evalue:2e-07 score:30.8 best_domain_score:29.7 name:HATPase_c; db:Pfam-A.hmm|PF13589.6 evalue:7.9e-11 score:41.2 best_domain_score:40.3 name:HATPase_c_3; db:Pfam-A.hmm|PF08676.11 evalue:1.3e-17 score:63.2 best_domain_score:59.5 name:MutL_C;
sprot_desc DNA mismatch repair protein MutL;
sprot_id sp|B2IYW1|MUTL_NOSP7;
sprot_target db:uniprot_sprot|sp|B2IYW1|MUTL_NOSP7 1 566 evalue:4.2e-282 qcov:100.00 identity:84.50;
tigrfam_acc TIGR00585;
tigrfam_desc DNA mismatch repair protein MutL;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutl;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00585 evalue:7e-81 score:271.5 best_domain_score:270.9 name:TIGR00585;
91896 92231 CDS
ID metaerg.pl|05306
allko_ids K04564; K01011; K01007; K01738; K01069; K02439; K01802;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090624.1 1 111 evalue:7.8e-53 qcov:100.00 identity:96.40;
kegg_pathway_id 00450; 00920; 00620; 00720; 00272;
kegg_pathway_name Selenoamino acid metabolism; Sulfur metabolism; Pyruvate metabolism; Reductive carboxylate cycle (CO2 fixation); Cysteine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00581;
pfam_desc Rhodanese-like domain;
pfam_id Rhodanese;
pfam_target db:Pfam-A.hmm|PF00581.20 evalue:2.6e-13 score:49.7 best_domain_score:49.5 name:Rhodanese;
93390 92296 CDS
ID metaerg.pl|05307
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
tm_num 1;
93390 92296 transmembrane_helix
ID metaerg.pl|05308
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i92392-92460o;
94570 93527 CDS
ID metaerg.pl|05309
allgo_ids GO:0019239;
allko_ids K01488;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090623.1 1 347 evalue:3.5e-200 qcov:100.00 identity:98.00;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00962;
pfam_desc Adenosine/AMP deaminase;
pfam_id A_deaminase;
pfam_target db:Pfam-A.hmm|PF00962.22 evalue:3e-17 score:62.2 best_domain_score:61.7 name:A_deaminase;
95338 94715 CDS
ID metaerg.pl|05310
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090621.1 1 205 evalue:7.6e-102 qcov:99.00 identity:89.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF05685;
pfam_desc Putative restriction endonuclease;
pfam_id Uma2;
pfam_target db:Pfam-A.hmm|PF05685.12 evalue:2.1e-21 score:75.4 best_domain_score:75.2 name:Uma2;
96776 95406 CDS
ID metaerg.pl|05311
allgo_ids GO:0000160;
allko_ids K07648; K02478; K07679; K07718; K07651; K07768; K11354; K07778; K00873; K07711; K01120; K07673; K07639; K08475; K07646; K07641; K07652; K07777; K07682; K00936; K07654; K07637; K03407; K11231; K02491; K07708; K07677; K08282; K01937; K07704; K00760; K02484; K11640; K04486; K11356; K11711; K07642; K11527; K07678; K10715; K02480; K02482; K07636; K07653; K07716; K02489; K01768; K07710; K03388; K02668; K10916; K08479; K07647; K07717; K07675; K07769; K02486; K13761; K11383; K12767; K11357; K10125; K04757; K07644; K01769; K07676; K10681; K06379;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090620.1 1 456 evalue:1.9e-222 qcov:100.00 identity:87.30;
kegg_pathway_id 00010; 00710; 00983; 05111; 00230; 00240; 04011; 02020; 03090; 00620; 00790; 00340;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Drug metabolism - other enzymes; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism; Folate biosynthesis; Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF00990; PF08448; PF00072;
pfam_desc Diguanylate cyclase, GGDEF domain; PAS fold; Response regulator receiver domain;
pfam_id GGDEF; PAS_4; Response_reg;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:1.4e-50 score:170.4 best_domain_score:169.3 name:GGDEF; db:Pfam-A.hmm|PF08448.10 evalue:1.4e-05 score:24.5 best_domain_score:21.3 name:PAS_4; db:Pfam-A.hmm|PF00072.24 evalue:1.5e-26 score:92.0 best_domain_score:90.9 name:Response_reg;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:8.7e-50 score:167.8 best_domain_score:167.2 name:TIGR00254;
99183 96766 CDS
ID metaerg.pl|05312
allgo_ids GO:0000155; GO:0007165;
allko_ids K07718; K07698; K07651; K07648; K07679; K02478; K13533; K11328; K07711; K00873; K11633; K07768; K07778; K11354; K07652; K08475; K07639; K01120; K07673; K13598; K07641; K07646; K07637; K03407; K07682; K00936; K07649; K07777; K07654; K02491; K13490; K11231; K07643; K01937; K08282; K07704; K10909; K07708; K07677; K07645; K11640; K11356; K02484; K07642; K11711; K10715; K07678; K02030; K11527; K13587; K07636; K07638; K07653; K02480; K02482; K08801; K14489; K07656; K01768; K07640; K07710; K07716; K02489; K07697; K10916; K08479; K07674; K03388; K02668; K07675; K07717; K13040; K10942; K07647; K11629; K10125; K11357; K04757; K11520; K07769; K14509; K12767; K11383; K02486; K07644; K07709; K13532; K06379; K07676; K10681; K07650; K01769;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090619.1 1 804 evalue:0.0e+00 qcov:99.90 identity:89.90;
kegg_pathway_id 00790; 04011; 02020; 03090; 00620; 00230; 05111; 00240; 00010; 00710;
kegg_pathway_name Folate biosynthesis; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF02518; PF00512; PF05231; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; MASE1; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; MASE1; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:9.8e-29 score:99.4 best_domain_score:98.5 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.8e-17 score:62.3 best_domain_score:61.0 name:HisKA; db:Pfam-A.hmm|PF05231.14 evalue:1.6e-37 score:128.5 best_domain_score:128.0 name:MASE1; db:Pfam-A.hmm|PF00072.24 evalue:1.7e-24 score:85.4 best_domain_score:84.1 name:Response_reg;
tm_num 7;
99183 96766 transmembrane_helix
ID metaerg.pl|05313
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i96826-96894o97030-97098i97135-97203o97246-97314i97348-97416o97492-97560i97579-97647o;
99374 100717 CDS
ID metaerg.pl|05314
allec_ids 6.3.4.4;
allgo_ids GO:0004019; GO:0005525; GO:0006164; GO:0005737; GO:0000287; GO:0044208;
allko_ids K01939;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090618.1 1 447 evalue:1.8e-257 qcov:100.00 identity:98.20;
kegg_pathway_id 00230; 00252;
kegg_pathway_name Purine metabolism; Alanine and aspartate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
metacyc_pathway_id DENOVOPURINE2-PWY; P121-PWY; PWY-841; PRPP-PWY; PWY-6126;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; adenine and adenosine salvage I;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Adenine-Adenosine-Salvage;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00709;
pfam_desc Adenylosuccinate synthetase;
pfam_id Adenylsucc_synt;
pfam_target db:Pfam-A.hmm|PF00709.21 evalue:8.7e-181 score:600.6 best_domain_score:600.4 name:Adenylsucc_synt;
sprot_desc Adenylosuccinate synthetase;
sprot_id sp|B2J8B7|PURA_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J8B7|PURA_NOSP7 1 447 evalue:9.6e-250 qcov:100.00 identity:93.30;
tigrfam_acc TIGR00184;
tigrfam_desc adenylosuccinate synthase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purA;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00184 evalue:4.7e-166 score:552.0 best_domain_score:551.8 name:TIGR00184;
100801 101100 CDS
ID metaerg.pl|05315
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0008097;
allko_ids K02897;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090617.1 1 99 evalue:7.7e-44 qcov:100.00 identity:93.90;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF01386;
pfam_desc Ribosomal L25p family;
pfam_id Ribosomal_L25p;
pfam_target db:Pfam-A.hmm|PF01386.19 evalue:6e-19 score:67.6 best_domain_score:67.4 name:Ribosomal_L25p;
sprot_desc 50S ribosomal protein L25;
sprot_id sp|Q3MBG0|RL25_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MBG0|RL25_ANAVT 1 98 evalue:1.2e-35 qcov:99.00 identity:75.50;
101293 102822 CDS
ID metaerg.pl|05316
allgo_ids GO:0005524; GO:0016301;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090616.1 1 509 evalue:9.1e-274 qcov:100.00 identity:93.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF13671; PF01583; PF08433; PF06414;
pfam_desc AAA domain; Adenylylsulphate kinase; Chromatin associated protein KTI12 ; Zeta toxin;
pfam_id AAA_33; APS_kinase; KTI12; Zeta_toxin;
pfam_target db:Pfam-A.hmm|PF13671.6 evalue:1.2e-21 score:76.6 best_domain_score:75.5 name:AAA_33; db:Pfam-A.hmm|PF01583.20 evalue:1.4e-06 score:27.5 best_domain_score:26.6 name:APS_kinase; db:Pfam-A.hmm|PF08433.10 evalue:1.3e-06 score:27.3 best_domain_score:26.5 name:KTI12; db:Pfam-A.hmm|PF06414.12 evalue:8.7e-08 score:30.9 best_domain_score:30.3 name:Zeta_toxin;
102847 103350 CDS
ID metaerg.pl|05317
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090615.1 1 167 evalue:1.6e-78 qcov:100.00 identity:86.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
tm_num 3;
102847 103350 transmembrane_helix
ID metaerg.pl|05318
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology o102904-103005i103066-103119o103129-103197i;
103577 103798 CDS
ID metaerg.pl|05319
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090613.1 1 73 evalue:1.2e-30 qcov:100.00 identity:87.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
104064 103804 CDS
ID metaerg.pl|05320
allgo_ids GO:0015979; GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_042202566.1 1 86 evalue:1.0e-39 qcov:100.00 identity:95.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
pfam_acc PF02941;
pfam_desc Ferredoxin thioredoxin reductase variable alpha chain;
pfam_id FeThRed_A;
pfam_target db:Pfam-A.hmm|PF02941.15 evalue:1.9e-34 score:116.8 best_domain_score:116.6 name:FeThRed_A;
sprot_desc Ferredoxin-thioredoxin reductase, variable chain;
sprot_id sp|P24018|FTRV_SYNP6;
sprot_target db:uniprot_sprot|sp|P24018|FTRV_SYNP6 14 86 evalue:2.9e-25 qcov:84.90 identity:69.90;
105197 104451 CDS
ID metaerg.pl|05321
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090611.1 1 248 evalue:2.7e-98 qcov:100.00 identity:78.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
tm_num 1;
105197 104451 transmembrane_helix
ID metaerg.pl|05322
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0317852; 70.4467; 0.039096; ; 70.3758;
topology i105045-105113o;
>Feature NODE_32_length_103012_cov_9.13894
2 244 CDS
ID metaerg.pl|05323
allko_ids K07146;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132928.1 1 80 evalue:4.6e-39 qcov:100.00 identity:91.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
sprot_desc hypothetical protein;
sprot_id sp|Q11RM1|Y2691_CYTH3;
sprot_target db:uniprot_sprot|sp|Q11RM1|Y2691_CYTH3 1 57 evalue:2.7e-17 qcov:71.20 identity:63.20;
207 1073 CDS
ID metaerg.pl|05324
allec_ids 2.4.2.1;
allgo_ids GO:0003824; GO:0009116; GO:0004731; GO:0042278;
allko_ids K03784;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132927.1 1 288 evalue:1.0e-141 qcov:100.00 identity:86.10;
kegg_pathway_id 00760; 00230; 00240;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Purine metabolism; Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PWY-6353; PWY0-1296; P1-PWY; PWY-6579; PWY-5695; P121-PWY; SALVADEHYPOX-PWY; URSIN-PWY; SALVPURINE2-PWY;
metacyc_pathway_name purine nucleotides degradation II (aerobic);; purine ribonucleosides degradation;; ; superpathway of guanine and guanosine salvage;; inosine 5'-phosphate degradation;; adenine and adenosine salvage I;; adenosine nucleotides degradation II;; ureide biosynthesis;; xanthine and xanthosine salvage;;
metacyc_pathway_type Purine-Degradation; Super-Pathways;; Purine-Degradation;; ; Guanine-Guanosine-Salvage; Super-Pathways;; Purine-Degradation;; Adenine-Adenosine-Salvage;; Adenosine-Nucleotides-Degradation;; Polyamine-Biosynthesis; Super-Pathways;; Purine-Nucleotides-Salvage;;
pfam_acc PF01048;
pfam_desc Phosphorylase superfamily;
pfam_id PNP_UDP_1;
pfam_target db:Pfam-A.hmm|PF01048.20 evalue:1.4e-27 score:95.7 best_domain_score:95.4 name:PNP_UDP_1;
sprot_desc Purine nucleoside phosphorylase DeoD-type 2;
sprot_id sp|Q6LLA7|DEOD2_PHOPR;
sprot_target db:uniprot_sprot|sp|Q6LLA7|DEOD2_PHOPR 20 255 evalue:2.4e-12 qcov:81.90 identity:24.50;
1377 1096 CDS
ID metaerg.pl|05325
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132926.1 1 93 evalue:6.6e-37 qcov:100.00 identity:86.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
2101 1475 CDS
ID metaerg.pl|05326
allgo_ids GO:0006355; GO:0005737; GO:0003677; GO:0000160;
allko_ids K11231; K07708; K07677; K08282; K02484; K11640; K11356; K07642; K07648; K07679; K07718; K07651; K11354; K07778; K07711; K07673; K07639; K07646; K07641; K07652; K07682; K07654; K03407; K07647; K07717; K07675; K11383; K02486; K12767; K11357; K10125; K04757; K07644; K07676; K10681; K06379; K11527; K07678; K10715; K02480; K02482; K07636; K07653; K07716; K02489; K07710; K03388; K02668; K10916; K08479; K07674; K07692;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132925.1 1 208 evalue:9.7e-89 qcov:100.00 identity:80.30;
kegg_pathway_id 03090; 04011; 02020; 00790; 05111;
kegg_pathway_name Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General; Folate biosynthesis; Vibrio cholerae pathogenic cycle;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF00196; PF00072;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain;
pfam_id GerE; Response_reg;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:5.6e-17 score:60.3 best_domain_score:59.3 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:5.7e-25 score:86.9 best_domain_score:86.1 name:Response_reg;
sprot_desc Transcriptional regulatory protein DegU;
sprot_id sp|P13800|DEGU_BACSU;
sprot_target db:uniprot_sprot|sp|P13800|DEGU_BACSU 5 198 evalue:6.5e-23 qcov:93.30 identity:28.00;
4140 2104 CDS
ID metaerg.pl|05327
allgo_ids GO:0000155; GO:0000160; GO:0016021; GO:0046983;
allko_ids K02486; K11617; K04757; K07680; K07675; K06379; K07676; K07644; K02480; K07636; K07674; K01768; K07704; K08282; K02484; K11640; K07778; K07683; K02478; K11623; K07718; K07682; K07777; K03407; K07673;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035152.1 1 678 evalue:1.9e-279 qcov:100.00 identity:73.70;
kegg_pathway_id 02020; 00230;
kegg_pathway_name Two-component system - General; Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF02518; PF07730;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase;
pfam_id HATPase_c; HisKA_3;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.5e-08 score:34.3 best_domain_score:33.0 name:HATPase_c; db:Pfam-A.hmm|PF07730.13 evalue:1.1e-07 score:31.4 best_domain_score:26.6 name:HisKA_3;
sp YES;
tm_num 1;
2104 2181 signal_peptide
ID metaerg.pl|05328
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
4140 2104 transmembrane_helix
ID metaerg.pl|05329
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology o3439-3507i;
4533 6962 CDS
ID metaerg.pl|05330
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035153.1 1 809 evalue:0.0e+00 qcov:100.00 identity:88.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF13715; PF14905; PF07715; PF00593;
pfam_desc CarboxypepD_reg-like domain; Outer membrane protein beta-barrel family; TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id CarbopepD_reg_2; OMP_b-brl_3; Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:7.6e-13 score:47.5 best_domain_score:46.3 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF14905.6 evalue:1.6e-108 score:362.5 best_domain_score:362.5 name:OMP_b-brl_3; db:Pfam-A.hmm|PF07715.15 evalue:2.6e-08 score:33.6 best_domain_score:33.6 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:5.1e-18 score:65.4 best_domain_score:65.4 name:TonB_dep_Rec;
sp YES;
4533 4598 signal_peptide
ID metaerg.pl|05331
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
8965 7076 CDS
ID metaerg.pl|05332
allec_ids 3.6.3.-; 3.6.3.41;
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0003677; GO:0004832; GO:0006438;
allko_ids K10441; K01996; K02071; K06861; K10820; K11072; K02045; K02004; K02006; K02052; K05847; K02056; K02010; K09817; K02003; K01997; K05776; K02017; K02032; K02074; K02041; K02023; K10542; K01990; K11962; K10539; K10562; K10111; K10545; K01998; K02031; K02049; K02065; K01995; K02193; K02013; K09687; K06857; K05816; K15738;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035154.1 1 629 evalue:0.0e+00 qcov:100.00 identity:87.10;
kegg_pathway_id 00910; 02010;
kegg_pathway_name Nitrogen metabolism; ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-6188; PWY-6166; PWY-6171; PWY-6135;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; ; ; ; ;
pfam_acc PF13304; PF13555; PF00005; PF16326; PF12848; PF01926;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; P-loop containing region of AAA domain; ABC transporter; ABC transporter C-terminal domain; ABC transporter; 50S ribosome-binding GTPase;
pfam_id AAA_21; AAA_29; ABC_tran; ABC_tran_CTD; ABC_tran_Xtn; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.3e-20 score:72.3 best_domain_score:29.3 name:AAA_21; db:Pfam-A.hmm|PF13555.6 evalue:7.6e-07 score:28.0 best_domain_score:14.3 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:9e-56 score:187.4 best_domain_score:104.8 name:ABC_tran; db:Pfam-A.hmm|PF16326.5 evalue:1e-12 score:47.4 best_domain_score:47.4 name:ABC_tran_CTD; db:Pfam-A.hmm|PF12848.7 evalue:1.7e-12 score:46.4 best_domain_score:45.3 name:ABC_tran_Xtn; db:Pfam-A.hmm|PF01926.23 evalue:5.6e-06 score:25.7 best_domain_score:16.1 name:MMR_HSR1;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YfmR;
sprot_id sp|O06476|YFMR_BACSU;
sprot_target db:uniprot_sprot|sp|O06476|YFMR_BACSU 1 623 evalue:5.7e-139 qcov:99.00 identity:43.90;
tigrfam_acc TIGR01189;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:6.6e-46 score:155.6 best_domain_score:66.8 name:TIGR01189;
9531 9214 CDS
ID metaerg.pl|05333
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132920.1 1 105 evalue:2.0e-34 qcov:100.00 identity:77.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
9564 10226 CDS
ID metaerg.pl|05334
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132919.1 1 220 evalue:1.1e-106 qcov:100.00 identity:86.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
12017 10227 CDS
ID metaerg.pl|05335
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887;
allko_ids K01996; K02071; K06861; K11072; K02045; K02006; K02052; K05847; K02010; K02017; K02023; K02000; K10111; K01995; K05816; K06147;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132918.1 1 596 evalue:5.8e-304 qcov:100.00 identity:94.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:1.1e-39 score:136.0 best_domain_score:135.4 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:1.2e-36 score:125.5 best_domain_score:122.8 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YknU;
sprot_id sp|O31707|YKNU_BACSU;
sprot_target db:uniprot_sprot|sp|O31707|YKNU_BACSU 1 596 evalue:1.1e-86 qcov:100.00 identity:35.20;
tm_num 6;
12017 10227 transmembrane_helix
ID metaerg.pl|05336
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i10275-10343o10440-10508i10656-10724o10752-10820i11001-11069o11097-11165i;
12164 13264 CDS
ID metaerg.pl|05337
allec_ids 1.4.1.9;
allgo_ids GO:0006520; GO:0016491; GO:0055114; GO:0050049; GO:0006552;
allko_ids K00263; K00270;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132917.1 1 366 evalue:1.3e-200 qcov:100.00 identity:95.10;
kegg_pathway_id 00290; 00280; 00360; 00400;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Phenylalanine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF00208; PF02812;
pfam_desc Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF00208.21 evalue:2.1e-18 score:66.2 best_domain_score:42.4 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:1.4e-24 score:85.6 best_domain_score:84.8 name:ELFV_dehydrog_N;
sprot_desc Leucine dehydrogenase;
sprot_id sp|Q60030|DHLE_THEIN;
sprot_target db:uniprot_sprot|sp|Q60030|DHLE_THEIN 15 363 evalue:5.3e-105 qcov:95.40 identity:56.30;
13404 14588 CDS
ID metaerg.pl|05338
allgo_ids GO:0003723; GO:0006355;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132916.1 1 394 evalue:4.9e-190 qcov:100.00 identity:87.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF01029;
pfam_desc NusB family;
pfam_id NusB;
pfam_target db:Pfam-A.hmm|PF01029.18 evalue:2.6e-25 score:88.5 best_domain_score:86.3 name:NusB;
tigrfam_acc TIGR01951;
tigrfam_desc transcription antitermination factor NusB;
tigrfam_mainrole Transcription;
tigrfam_name nusB;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR01951 evalue:5.2e-29 score:100.3 best_domain_score:99.6 name:TIGR01951;
14599 14901 CDS
ID metaerg.pl|05339
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035160.1 1 100 evalue:5.1e-43 qcov:100.00 identity:93.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF12732;
pfam_desc YtxH-like protein;
pfam_id YtxH;
pfam_target db:Pfam-A.hmm|PF12732.7 evalue:4.9e-18 score:64.7 best_domain_score:63.8 name:YtxH;
sp YES;
tm_num 1;
14599 14673 signal_peptide
ID metaerg.pl|05340
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
14599 14901 transmembrane_helix
ID metaerg.pl|05341
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology o14611-14679i;
14914 15456 CDS
ID metaerg.pl|05342
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132914.1 1 180 evalue:2.7e-87 qcov:100.00 identity:91.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF07610;
pfam_desc Protein of unknown function (DUF1573);
pfam_id DUF1573;
pfam_target db:Pfam-A.hmm|PF07610.11 evalue:3.9e-36 score:122.2 best_domain_score:121.8 name:DUF1573;
sp YES;
14914 14970 lipoprotein_signal_peptide
ID metaerg.pl|05343
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
15460 15771 CDS
ID metaerg.pl|05344
allgo_ids GO:0016021; GO:0005886; GO:0015031;
allko_ids K03210;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132913.1 1 103 evalue:3.9e-46 qcov:100.00 identity:96.10;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF02699;
pfam_desc Preprotein translocase subunit;
pfam_id YajC;
pfam_target db:Pfam-A.hmm|PF02699.15 evalue:2.5e-29 score:100.2 best_domain_score:99.8 name:YajC;
sprot_desc Sec translocon accessory complex subunit YrbF;
sprot_id sp|O32052|YRBF_BACSU;
sprot_target db:uniprot_sprot|sp|O32052|YRBF_BACSU 12 91 evalue:9.0e-10 qcov:77.70 identity:36.20;
tigrfam_acc TIGR00739;
tigrfam_desc preprotein translocase, YajC subunit;
tigrfam_mainrole Protein fate;
tigrfam_name yajC;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00739 evalue:2.1e-25 score:87.8 best_domain_score:87.5 name:TIGR00739;
tm_num 1;
15460 15771 transmembrane_helix
ID metaerg.pl|05345
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology o15502-15558i;
15780 16742 CDS
ID metaerg.pl|05346
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132912.1 1 320 evalue:8.0e-159 qcov:100.00 identity:88.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
tm_num 1;
15780 16742 transmembrane_helix
ID metaerg.pl|05347
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i15825-15884o;
16735 17361 CDS
ID metaerg.pl|05348
allec_ids 2.7.1.24;
allgo_ids GO:0004140; GO:0005524; GO:0015937; GO:0005737;
allko_ids K00859;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132911.1 1 207 evalue:6.7e-82 qcov:99.50 identity:75.40;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PANTOSYN-PWY; PWY-4242; COA-PWY; PWY-4221;
metacyc_pathway_name superpathway of coenzyme A biosynthesis I (bacteria);; ; coenzyme A biosynthesis I (prokaryotic);; superpathway of coenzyme A biosynthesis II (plants);;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; ; CoA-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;;
pfam_acc PF01121;
pfam_desc Dephospho-CoA kinase;
pfam_id CoaE;
pfam_target db:Pfam-A.hmm|PF01121.20 evalue:1.2e-43 score:148.1 best_domain_score:147.9 name:CoaE;
sprot_desc Dephospho-CoA kinase;
sprot_id sp|Q65VP4|COAE_MANSM;
sprot_target db:uniprot_sprot|sp|Q65VP4|COAE_MANSM 9 203 evalue:1.1e-22 qcov:93.80 identity:32.00;
tigrfam_acc TIGR00152;
tigrfam_desc dephospho-CoA kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00152;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00152 evalue:1.1e-37 score:128.8 best_domain_score:128.5 name:TIGR00152;
17588 17346 CDS
ID metaerg.pl|05349
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035165.1 1 80 evalue:1.1e-32 qcov:100.00 identity:88.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
18556 17585 CDS
ID metaerg.pl|05350
allgo_ids GO:0005515;
allko_ids K09574; K01090; K09667; K01802; K08884; K05864; K09571; K01768;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132909.1 1 323 evalue:7.6e-157 qcov:100.00 identity:83.90;
kegg_pathway_id 04020; 00230; 01030; 05012;
kegg_pathway_name Calcium signaling pathway; Purine metabolism; Glycan structures - biosynthesis 1; Parkinson's disease;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF00515; PF13424; PF13428; PF13432; PF14559; PF07719; PF13174; PF13176; PF13181;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_12; TPR_14; TPR_16; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:1.4e-20 score:71.4 best_domain_score:31.6 name:TPR_1; db:Pfam-A.hmm|PF13424.6 evalue:9.7e-10 score:37.8 best_domain_score:18.0 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:1.7e-08 score:33.8 best_domain_score:13.2 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:1.1e-10 score:41.1 best_domain_score:14.7 name:TPR_16; db:Pfam-A.hmm|PF14559.6 evalue:4.6e-06 score:26.3 best_domain_score:13.8 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:5.8e-22 score:75.2 best_domain_score:30.7 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:3.6e-12 score:45.4 best_domain_score:18.2 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:4.9e-09 score:34.9 best_domain_score:17.6 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:2.1e-13 score:48.6 best_domain_score:18.7 name:TPR_8;
sp YES;
17585 17635 lipoprotein_signal_peptide
ID metaerg.pl|05351
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
18638 19132 CDS
ID metaerg.pl|05352
allec_ids 3.4.-.-;
allgo_ids GO:0005886; GO:0008234;
allko_ids K13695;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035167.1 1 164 evalue:2.9e-72 qcov:100.00 identity:84.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF00877; PF05708;
pfam_desc NlpC/P60 family; Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family;
pfam_id NLPC_P60; Peptidase_C92;
pfam_target db:Pfam-A.hmm|PF00877.19 evalue:1.7e-25 score:88.3 best_domain_score:87.9 name:NLPC_P60; db:Pfam-A.hmm|PF05708.12 evalue:9.7e-07 score:28.3 best_domain_score:19.7 name:Peptidase_C92;
sp YES;
sprot_desc Probable endopeptidase NlpC;
sprot_id sp|P23898|NLPC_ECOLI;
sprot_target db:uniprot_sprot|sp|P23898|NLPC_ECOLI 18 163 evalue:9.3e-17 qcov:89.00 identity:35.50;
tm_num 1;
18638 18721 lipoprotein_signal_peptide
ID metaerg.pl|05353
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
18638 19132 transmembrane_helix
ID metaerg.pl|05354
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology o18665-18733i;
19334 20836 CDS
ID metaerg.pl|05355
allec_ids 7.1.2.2; 3.6.3.14;
allgo_ids GO:0005524; GO:0005886; GO:0045261; GO:0046933; GO:0015986;
allko_ids K02112;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035168.1 1 500 evalue:2.1e-278 qcov:100.00 identity:98.20;
kegg_pathway_id 00190; 00195;
kegg_pathway_name Oxidative phosphorylation; Photosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PRPP-PWY; PWY-6126; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00006; PF02874;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta family, beta-barrel domain;
pfam_id ATP-synt_ab; ATP-synt_ab_N;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:8.7e-59 score:198.0 best_domain_score:197.1 name:ATP-synt_ab; db:Pfam-A.hmm|PF02874.23 evalue:2.5e-21 score:75.2 best_domain_score:75.0 name:ATP-synt_ab_N;
sprot_desc ATP synthase subunit beta;
sprot_id sp|Q11Y90|ATPB_CYTH3;
sprot_target db:uniprot_sprot|sp|Q11Y90|ATPB_CYTH3 1 498 evalue:1.8e-236 qcov:99.60 identity:83.20;
tigrfam_acc TIGR01039;
tigrfam_desc ATP synthase F1, beta subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name atpD;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01039 evalue:3.2e-238 score:790.2 best_domain_score:789.9 name:TIGR01039;
20877 21125 CDS
ID metaerg.pl|05356
allec_ids 3.6.3.14;
allgo_ids GO:0015986; GO:0005886; GO:0045261; GO:0005524; GO:0046933;
allko_ids K02114;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132906.1 1 81 evalue:2.4e-35 qcov:98.80 identity:97.50;
kegg_pathway_id 00190; 00195;
kegg_pathway_name Oxidative phosphorylation; Photosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PWY-6126; PRPP-PWY; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF02823;
pfam_desc ATP synthase, Delta/Epsilon chain, beta-sandwich domain;
pfam_id ATP-synt_DE_N;
pfam_target db:Pfam-A.hmm|PF02823.16 evalue:2.5e-23 score:81.0 best_domain_score:80.9 name:ATP-synt_DE_N;
sprot_desc ATP synthase epsilon chain;
sprot_id sp|Q4QN65|ATPE_HAEI8;
sprot_target db:uniprot_sprot|sp|Q4QN65|ATPE_HAEI8 4 78 evalue:8.0e-09 qcov:91.50 identity:39.50;
tigrfam_acc TIGR01216;
tigrfam_desc ATP synthase F1, epsilon subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATP_synt_epsi;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01216 evalue:6e-21 score:74.0 best_domain_score:73.9 name:TIGR01216;
21254 21448 CDS
ID metaerg.pl|05357
allgo_ids GO:0003735; GO:0005840; GO:0006412;
allko_ids K02970;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132905.1 1 64 evalue:3.4e-24 qcov:100.00 identity:100.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF01165;
pfam_desc Ribosomal protein S21;
pfam_id Ribosomal_S21;
pfam_target db:Pfam-A.hmm|PF01165.20 evalue:2.5e-18 score:64.7 best_domain_score:64.6 name:Ribosomal_S21;
sprot_desc 30S ribosomal protein S21;
sprot_id sp|B3EUG8|RS21_AMOA5;
sprot_target db:uniprot_sprot|sp|B3EUG8|RS21_AMOA5 1 63 evalue:1.4e-13 qcov:98.40 identity:58.70;
tigrfam_acc TIGR00030;
tigrfam_desc ribosomal protein bS21;
tigrfam_mainrole Protein synthesis;
tigrfam_name S21p;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00030 evalue:2.3e-19 score:68.1 best_domain_score:67.9 name:TIGR00030;
21605 22240 CDS
ID metaerg.pl|05358
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Cecembia;s__Cecembia rubra;
genomedb_acc GCF_003014575.1;
genomedb_target db:genomedb|GCF_003014575.1|WP_106566856.1 1 211 evalue:4.8e-67 qcov:100.00 identity:59.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
sp YES;
21605 21649 lipoprotein_signal_peptide
ID metaerg.pl|05359
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
22330 23214 CDS
ID metaerg.pl|05360
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0005737; GO:0009037; GO:0007049; GO:0051301; GO:0007059; GO:0006313;
allko_ids K03733;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132904.1 1 294 evalue:6.3e-142 qcov:100.00 identity:87.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF00589; PF02899; PF13495;
pfam_desc Phage integrase family; Phage integrase, N-terminal SAM-like domain; Phage integrase, N-terminal SAM-like domain;
pfam_id Phage_integrase; Phage_int_SAM_1; Phage_int_SAM_4;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:3.9e-37 score:126.9 best_domain_score:126.0 name:Phage_integrase; db:Pfam-A.hmm|PF02899.17 evalue:3.6e-19 score:68.1 best_domain_score:66.5 name:Phage_int_SAM_1; db:Pfam-A.hmm|PF13495.6 evalue:2.8e-07 score:30.2 best_domain_score:28.3 name:Phage_int_SAM_4;
sprot_desc Tyrosine recombinase XerC;
sprot_id sp|B3QM22|XERC_CHLP8;
sprot_target db:uniprot_sprot|sp|B3QM22|XERC_CHLP8 2 294 evalue:1.6e-51 qcov:99.70 identity:35.30;
23243 23548 CDS
ID metaerg.pl|05361
allgo_ids GO:0044238;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132903.1 1 101 evalue:7.6e-47 qcov:100.00 identity:99.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF02482;
pfam_desc Sigma 54 modulation protein / S30EA ribosomal protein;
pfam_id Ribosomal_S30AE;
pfam_target db:Pfam-A.hmm|PF02482.19 evalue:9.2e-17 score:60.9 best_domain_score:60.7 name:Ribosomal_S30AE;
tigrfam_acc TIGR00741;
tigrfam_desc ribosomal subunit interface protein;
tigrfam_mainrole Protein synthesis;
tigrfam_name yfiA;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00741 evalue:2.3e-11 score:43.2 best_domain_score:43.0 name:TIGR00741;
23901 24860 CDS
ID metaerg.pl|05362
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035672.1 6 319 evalue:1.8e-174 qcov:98.40 identity:90.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF05721;
pfam_desc Phytanoyl-CoA dioxygenase (PhyH);
pfam_id PhyH;
pfam_target db:Pfam-A.hmm|PF05721.13 evalue:6.7e-13 score:48.6 best_domain_score:48.2 name:PhyH;
25972 24986 CDS
ID metaerg.pl|05363
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035671.1 1 328 evalue:1.8e-166 qcov:100.00 identity:87.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF01261;
pfam_desc Xylose isomerase-like TIM barrel;
pfam_id AP_endonuc_2;
pfam_target db:Pfam-A.hmm|PF01261.24 evalue:1.1e-12 score:47.1 best_domain_score:46.0 name:AP_endonuc_2;
sp YES;
24986 25117 signal_peptide
ID metaerg.pl|05364
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
27339 26101 CDS
ID metaerg.pl|05365
allgo_ids GO:0055085;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035669.1 1 411 evalue:3.1e-195 qcov:99.80 identity:81.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF05569; PF03544;
pfam_desc BlaR1 peptidase M56; Gram-negative bacterial TonB protein C-terminal;
pfam_id Peptidase_M56; TonB_C;
pfam_target db:Pfam-A.hmm|PF05569.11 evalue:1.3e-11 score:43.5 best_domain_score:43.5 name:Peptidase_M56; db:Pfam-A.hmm|PF03544.14 evalue:2.4e-22 score:78.4 best_domain_score:77.8 name:TonB_C;
tigrfam_acc TIGR01352;
tigrfam_desc TonB family C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name tonB_Cterm;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01352 evalue:1.7e-12 score:46.7 best_domain_score:46.1 name:TIGR01352;
tm_num 4;
27339 26101 transmembrane_helix
ID metaerg.pl|05366
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology o26113-26181i26194-26262o26371-26439i26896-26964o;
27710 27336 CDS
ID metaerg.pl|05367
allgo_ids GO:0003677; GO:0045892;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132812.1 1 120 evalue:7.9e-54 qcov:96.80 identity:85.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF03965;
pfam_desc Penicillinase repressor;
pfam_id Penicillinase_R;
pfam_target db:Pfam-A.hmm|PF03965.16 evalue:1.8e-27 score:95.2 best_domain_score:95.1 name:Penicillinase_R;
28237 30000 CDS
ID metaerg.pl|05368
allgo_ids GO:0003676; GO:0005840; GO:0020003; GO:0003723; GO:0003735; GO:0006412;
allko_ids K12818; K03022; K00962; K03049; K02945;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032822.1 1 587 evalue:0.0e+00 qcov:100.00 identity:98.60;
kegg_pathway_id 03010; 00240; 00230; 03020;
kegg_pathway_name Ribosome; Pyrimidine metabolism; Purine metabolism; RNA polymerase;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF17092; PF00575; PF13509;
pfam_desc Penicillin-binding protein OB-like domain; S1 RNA binding domain; S1 domain;
pfam_id PCB_OB; S1; S1_2;
pfam_target db:Pfam-A.hmm|PF17092.5 evalue:1.1e-06 score:28.6 best_domain_score:9.1 name:PCB_OB; db:Pfam-A.hmm|PF00575.23 evalue:3.6e-84 score:276.4 best_domain_score:69.0 name:S1; db:Pfam-A.hmm|PF13509.6 evalue:2.2e-09 score:36.5 best_domain_score:10.3 name:S1_2;
sprot_desc 30S ribosomal protein S1;
sprot_id sp|Q9Z8M3|RS1_CHLPN;
sprot_target db:uniprot_sprot|sp|Q9Z8M3|RS1_CHLPN 38 535 evalue:8.5e-129 qcov:84.80 identity:44.10;
30147 31331 CDS
ID metaerg.pl|05369
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Rhodonellum;s__Rhodonellum psychrophilum;
genomedb_acc GCF_000381545.1;
genomedb_target db:genomedb|GCF_000381545.1|WP_019598054.1 1 394 evalue:5.4e-157 qcov:100.00 identity:66.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
sp YES;
30147 30194 lipoprotein_signal_peptide
ID metaerg.pl|05370
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
31328 32464 CDS
ID metaerg.pl|05371
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Belliella;s__Belliella buryatensis;
genomedb_acc GCF_900188245.1;
genomedb_target db:genomedb|GCF_900188245.1|WP_089241672.1 9 378 evalue:5.0e-168 qcov:97.90 identity:75.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
sp YES;
31328 31378 lipoprotein_signal_peptide
ID metaerg.pl|05372
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
32570 33175 CDS
ID metaerg.pl|05373
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Echinicola;s__Echinicola strongylocentroti;
genomedb_acc GCA_003260975.1;
genomedb_target db:genomedb|GCA_003260975.1|AWW31957.1 21 200 evalue:2.1e-16 qcov:89.60 identity:31.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
sp YES;
32570 32632 signal_peptide
ID metaerg.pl|05374
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
33178 33540 CDS
ID metaerg.pl|05375
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
sp YES;
33178 33225 lipoprotein_signal_peptide
ID metaerg.pl|05376
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
35767 33545 CDS
ID metaerg.pl|05377
allec_ids 1.17.2.1;
allgo_ids GO:0016491; GO:0055114; GO:0016021; GO:0009055; GO:0020037; GO:0046872; GO:0016725; GO:0019439;
allko_ids K13481; K11177; K13482; K03518; K11178; K03520; K00157; K00106; K00087; K18030;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032820.1 1 739 evalue:0.0e+00 qcov:99.90 identity:84.30;
kegg_pathway_id 00680; 00350; 00750; 00760; 00633; 00230; 00380; 00280; 00983;
kegg_pathway_name Methane metabolism; Tyrosine metabolism; Vitamin B6 metabolism; Nicotinate and nicotinamide metabolism; Trinitrotoluene degradation; Purine metabolism; Tryptophan metabolism; Valine, leucine and isoleucine degradation; Drug metabolism - other enzymes;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PWY-5062;
metacyc_pathway_name superpathway of nicotinate degradation;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;;
pfam_acc PF02738;
pfam_desc Molybdopterin-binding domain of aldehyde dehydrogenase;
pfam_id Ald_Xan_dh_C2;
pfam_target db:Pfam-A.hmm|PF02738.18 evalue:2.9e-72 score:243.1 best_domain_score:89.7 name:Ald_Xan_dh_C2;
sp YES;
sprot_desc Nicotinate dehydrogenase subunit B;
sprot_id sp|Q88FX8|NICB_PSEPK;
sprot_target db:uniprot_sprot|sp|Q88FX8|NICB_PSEPK 59 737 evalue:6.3e-113 qcov:91.80 identity:34.90;
33545 33658 signal_peptide
ID metaerg.pl|05378
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
36238 35771 CDS
ID metaerg.pl|05379
allec_ids 1.17.2.1;
allgo_ids GO:0009055; GO:0051536; GO:0051537; GO:0046872; GO:0016725; GO:0019439; GO:0055114;
allko_ids K13483; K00106; K00087; K13481; K03518; K13482; K18029;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134562.1 1 155 evalue:2.6e-70 qcov:100.00 identity:79.40;
kegg_pathway_id 00680; 00230; 00633; 00983;
kegg_pathway_name Methane metabolism; Purine metabolism; Trinitrotoluene degradation; Drug metabolism - other enzymes;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PWY-5062;
metacyc_pathway_name superpathway of nicotinate degradation;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;;
pfam_acc PF00111; PF01799;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain;
pfam_id Fer2; Fer2_2;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:3.2e-06 score:26.2 best_domain_score:26.2 name:Fer2; db:Pfam-A.hmm|PF01799.20 evalue:1.7e-24 score:84.9 best_domain_score:84.9 name:Fer2_2;
sprot_desc Nicotinate dehydrogenase subunit A;
sprot_id sp|Q88FX9|NICA_PSEPK;
sprot_target db:uniprot_sprot|sp|Q88FX9|NICA_PSEPK 3 154 evalue:7.7e-37 qcov:98.10 identity:44.70;
36923 36348 CDS
ID metaerg.pl|05380
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_016255647.1 1 191 evalue:2.8e-82 qcov:100.00 identity:81.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
sp YES;
36348 36395 lipoprotein_signal_peptide
ID metaerg.pl|05381
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
37310 37237 tRNA
ID metaerg.pl|05382
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
name tRNA_Cys_gca;
37679 38941 CDS
ID metaerg.pl|05383
allgo_ids GO:0009055; GO:0020037;
allko_ids K05301; K04013;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134560.1 1 420 evalue:6.9e-227 qcov:100.00 identity:94.30;
kegg_pathway_id 00920; 00910;
kegg_pathway_name Sulfur metabolism; Nitrogen metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF14522; PF13442; PF00034; PF14537; PF02085;
pfam_desc Cytochrome c7 and related cytochrome c; Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c; Cytochrome c3; Class III cytochrome C family;
pfam_id Cytochrome_C7; Cytochrome_CBB3; Cytochrom_C; Cytochrom_c3_2; Cytochrom_CIII;
pfam_target db:Pfam-A.hmm|PF14522.6 evalue:4.2e-15 score:54.7 best_domain_score:35.7 name:Cytochrome_C7; db:Pfam-A.hmm|PF13442.6 evalue:1.4e-10 score:40.6 best_domain_score:37.9 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:2e-11 score:44.1 best_domain_score:44.1 name:Cytochrom_C; db:Pfam-A.hmm|PF14537.6 evalue:7.8e-10 score:38.3 best_domain_score:21.3 name:Cytochrom_c3_2; db:Pfam-A.hmm|PF02085.16 evalue:8.9e-11 score:41.3 best_domain_score:22.1 name:Cytochrom_CIII;
sp YES;
tm_num 3;
37679 37771 signal_peptide
ID metaerg.pl|05384
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
37679 38941 transmembrane_helix
ID metaerg.pl|05385
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i37697-37765o38168-38236i38315-38374o;
38980 42060 CDS
ID metaerg.pl|05386
allko_ids K04014; K11260; K00122; K00443; K00371; K00123; K00533; K00124; K15906; K02027; K00817; K08349; K03388; K00170; K00176; K00125; K00226; K00335; K13483; K00205; K00171; K00441; K08346;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134559.1 1 1026 evalue:0.0e+00 qcov:100.00 identity:93.20;
kegg_pathway_id 00401; 00400; 00240; 00720; 00640; 00650; 00790; 00630; 00350; 00620; 00020; 00010; 00680; 00190; 00360; 00340; 00130; 02020; 00910; 00633;
kegg_pathway_name Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism; Reductive carboxylate cycle (CO2 fixation); Propanoate metabolism; Butanoate metabolism; Folate biosynthesis; Glyoxylate and dicarboxylate metabolism; Tyrosine metabolism; Pyruvate metabolism; Citrate cycle (TCA cycle); Glycolysis / Gluconeogenesis; Methane metabolism; Oxidative phosphorylation; Phenylalanine metabolism; Histidine metabolism; Ubiquinone biosynthesis; Two-component system - General; Nitrogen metabolism; Trinitrotoluene degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF13247; PF12837; PF12838; PF13183; PF13187;
pfam_desc 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id Fer4_11; Fer4_6; Fer4_7; Fer4_8; Fer4_9;
pfam_target db:Pfam-A.hmm|PF13247.6 evalue:2.3e-12 score:46.2 best_domain_score:35.4 name:Fer4_11; db:Pfam-A.hmm|PF12837.7 evalue:1e-07 score:31.0 best_domain_score:19.0 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:5.7e-23 score:80.5 best_domain_score:39.9 name:Fer4_7; db:Pfam-A.hmm|PF13183.6 evalue:7.2e-07 score:28.8 best_domain_score:20.1 name:Fer4_8; db:Pfam-A.hmm|PF13187.6 evalue:1.9e-06 score:27.2 best_domain_score:16.4 name:Fer4_9;
sp YES;
tigrfam_acc TIGR04519;
tigrfam_desc MoCo/4Fe-4S cofactor protein extended Tat translocation domain;
tigrfam_name MoCo_extend_TAT;
tigrfam_target db:TIGRFAMs.hmm|TIGR04519 evalue:2e-18 score:65.3 best_domain_score:61.9 name:TIGR04519;
38980 39174 signal_peptide
ID metaerg.pl|05387
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
42078 43442 CDS
ID metaerg.pl|05388
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134558.1 1 454 evalue:1.2e-256 qcov:100.00 identity:99.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF03916;
pfam_desc Polysulphide reductase, NrfD;
pfam_id NrfD;
pfam_target db:Pfam-A.hmm|PF03916.14 evalue:3.2e-18 score:65.7 best_domain_score:65.7 name:NrfD;
tm_num 10;
42078 43442 transmembrane_helix
ID metaerg.pl|05389
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i42186-42254o42312-42380i42399-42467o42555-42623i42735-42803o42846-42914i42972-43040o43098-43157i43176-43244o43317-43385i;
43445 43975 CDS
ID metaerg.pl|05390
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134557.1 1 176 evalue:2.6e-90 qcov:100.00 identity:93.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF11821;
pfam_desc Protein of unknown function (DUF3341);
pfam_id DUF3341;
pfam_target db:Pfam-A.hmm|PF11821.8 evalue:1.3e-60 score:203.2 best_domain_score:203.0 name:DUF3341;
tm_num 2;
43445 43975 transmembrane_helix
ID metaerg.pl|05391
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i43607-43675o43733-43801i;
43989 44615 CDS
ID metaerg.pl|05392
allgo_ids GO:0009055; GO:0020037;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134556.1 1 208 evalue:1.5e-113 qcov:100.00 identity:96.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF13442; PF00034;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c;
pfam_id Cytochrome_CBB3; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:1.1e-16 score:60.2 best_domain_score:59.4 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:5.3e-07 score:29.9 best_domain_score:26.6 name:Cytochrom_C;
sp YES;
43989 44051 lipoprotein_signal_peptide
ID metaerg.pl|05393
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
44618 45907 CDS
ID metaerg.pl|05394
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134555.1 1 429 evalue:5.0e-241 qcov:100.00 identity:95.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
tm_num 10;
44618 45907 transmembrane_helix
ID metaerg.pl|05395
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i44684-44752o44819-44887i44924-44992o45110-45169i45245-45313o45341-45409i45467-45526o45584-45652i45671-45739o45767-45835i;
45929 46963 CDS
ID metaerg.pl|05396
allgo_ids GO:0004129; GO:0005507; GO:0016020;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134554.1 1 344 evalue:1.8e-188 qcov:100.00 identity:93.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF00116; PF02790;
pfam_desc Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain;
pfam_id COX2; COX2_TM;
pfam_target db:Pfam-A.hmm|PF00116.20 evalue:5e-11 score:41.8 best_domain_score:39.8 name:COX2; db:Pfam-A.hmm|PF02790.15 evalue:1.8e-07 score:30.4 best_domain_score:30.4 name:COX2_TM;
tm_num 4;
45929 46963 transmembrane_helix
ID metaerg.pl|05397
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology o45938-45997i46058-46126o46184-46252i46313-46381o;
46979 48868 CDS
ID metaerg.pl|05398
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0009060; GO:0016021; GO:0020037; GO:0055114; GO:0005887; GO:0070469; GO:0009486; GO:0046872; GO:0015990;
allko_ids K02274;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134553.1 1 629 evalue:0.0e+00 qcov:100.00 identity:98.40;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00115;
pfam_desc Cytochrome C and Quinol oxidase polypeptide I;
pfam_id COX1;
pfam_target db:Pfam-A.hmm|PF00115.20 evalue:4e-140 score:466.7 best_domain_score:466.7 name:COX1;
sprot_desc Alternative cytochrome c oxidase subunit 1;
sprot_id sp|P98000|COXN_BRADU;
sprot_target db:uniprot_sprot|sp|P98000|COXN_BRADU 27 591 evalue:2.8e-154 qcov:89.80 identity:48.00;
tm_num 12;
46979 48868 transmembrane_helix
ID metaerg.pl|05399
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i47102-47170o47276-47344i47381-47449o47534-47602i47663-47731o47846-47914i47933-48001o48038-48106i48143-48211o48254-48322i48359-48427o48503-48571i;
48849 49931 CDS
ID metaerg.pl|05400
allgo_ids GO:0006784; GO:0016021; GO:0016627; GO:0055114;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134552.1 1 356 evalue:7.6e-174 qcov:98.90 identity:89.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF02628;
pfam_desc Cytochrome oxidase assembly protein;
pfam_id COX15-CtaA;
pfam_target db:Pfam-A.hmm|PF02628.15 evalue:3e-44 score:150.7 best_domain_score:141.2 name:COX15-CtaA;
sp YES;
tm_num 8;
48849 48953 signal_peptide
ID metaerg.pl|05401
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
48849 49931 transmembrane_helix
ID metaerg.pl|05402
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i48882-48950o49200-49268i49287-49355o49365-49433i49494-49562o49638-49706i49743-49811o49821-49889i;
49928 50830 CDS
ID metaerg.pl|05403
allec_ids 2.5.1.141; 2.5.1.-;
allgo_ids GO:0016021; GO:0016765; GO:0005886; GO:0008495; GO:0048034;
allko_ids K02257;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032809.1 1 300 evalue:2.4e-149 qcov:100.00 identity:90.70;
kegg_pathway_id 00860; 00190;
kegg_pathway_name Porphyrin and chlorophyll metabolism; Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metabolic_acc TIGR01473;
metabolic_process compound:Oxygen;process:Cytochrome (quinone) oxidase, bo type;gene:CyoE;;
metabolic_target db:metabolic.hmm|TIGR01473 evalue:1.7e-80 score:269.9 best_domain_score:269.7 name:TIGR01473;
metacyc_pathway_id PWY-5817; PWY-6403; PWY-5838; PWY-4502; PWY-5064; PWY-5899; PWY-5134; PWY-6520; PWY-6383; PWY-5027; PWY-5893; PWY-5133; PWY-5864; PWY-6129; PWY-5132; PWY-5897; PWY-5808; PWY-6263; PWY-5861; PWY-724; PWY-6262; PWY-5805; PWY-5783; POLYISOPRENSYN-PWY; PWY-5701; PWY-5140; PWY-5135; PWY-6404; PWY-5806; PWY-5898; PWY-5816; PWY-5863; PWY-5896; PWY-5845; PWY-5862; PWY-5068; PWY-2681;
metacyc_pathway_name dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; wighteone and luteone biosynthesis;; chlorophyll a biosynthesis II;; superpathway of menaquinol-13 biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; lupulone and humulone biosynthesis;; superpathway of menaquinol-11 biosynthesis;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; demethylmenaquinol-8 biosynthesis II;; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; polyisoprenoid biosynthesis (E. coli);; shikonin biosynthesis;; cannabinoid biosynthesis;; xanthohumol biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of menaquinol-12 biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;;
metacyc_pathway_type Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; QUINONE-SYN;; TERPENOPHENOLICS-SYN;; PRENYLFLAVONOID-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF01040;
pfam_desc UbiA prenyltransferase family;
pfam_id UbiA;
pfam_target db:Pfam-A.hmm|PF01040.18 evalue:4.9e-52 score:176.0 best_domain_score:175.7 name:UbiA;
sprot_desc Protoheme IX farnesyltransferase;
sprot_id sp|Q11SZ7|COXX_CYTH3;
sprot_target db:uniprot_sprot|sp|Q11SZ7|COXX_CYTH3 15 300 evalue:1.6e-59 qcov:95.30 identity:45.50;
tigrfam_acc TIGR01473;
tigrfam_desc protoheme IX farnesyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cyoE_ctaB;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01473 evalue:1.7e-80 score:269.9 best_domain_score:269.7 name:TIGR01473;
tm_num 9;
49928 50830 transmembrane_helix
ID metaerg.pl|05404
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i50009-50062o50090-50158i50219-50287o50300-50359i50378-50446o50459-50527i50585-50653o50663-50731i50765-50818o;
50834 51415 CDS
ID metaerg.pl|05405
allec_ids 1.10.3.-;
allgo_ids GO:0015002; GO:0016020; GO:0016021; GO:0005886; GO:0004129; GO:0019646; GO:0042773;
allko_ids K02828;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134550.1 1 193 evalue:1.9e-99 qcov:100.00 identity:95.30;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PWY-5404; PWY-5476; PWY-5466; PWY-5787; PWY-5405; PWY-5439;
metacyc_pathway_name betaxanthin biosynthesis (via dopaxanthin);; cornusiin E biosynthesis;; matairesinol biosynthesis;; oligomeric urushiol biosynthesis;; superpathway of betalain biosynthesis;; betacyanin biosynthesis (via dopamine);;
metacyc_pathway_type BETALAIN-ALKALOIDS;; ELLAGITANNINS;; LIGNAN-SYN;; AROMATIC-COMPOUNDS-BIOSYN;; BETALAIN-ALKALOIDS; Super-Pathways;; BETALAIN-ALKALOIDS;;
pfam_acc PF00510;
pfam_desc Cytochrome c oxidase subunit III;
pfam_id COX3;
pfam_target db:Pfam-A.hmm|PF00510.18 evalue:1.9e-16 score:59.9 best_domain_score:55.2 name:COX3;
sprot_desc Probable quinol oxidase subunit 3;
sprot_id sp|Q49WI2|QOX3_STAS1;
sprot_target db:uniprot_sprot|sp|Q49WI2|QOX3_STAS1 21 186 evalue:3.8e-09 qcov:86.00 identity:25.00;
tm_num 5;
50834 51415 transmembrane_helix
ID metaerg.pl|05406
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i50897-50965o51008-51076i51110-51178o51221-51289i51347-51406o;
51435 52211 CDS
ID metaerg.pl|05407
allec_ids 1.9.3.1;
allgo_ids GO:0015002; GO:0016020; GO:0016021; GO:0005886; GO:0004129; GO:0019646;
allko_ids K02276;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134549.1 1 258 evalue:2.0e-139 qcov:100.00 identity:95.00;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00510;
pfam_desc Cytochrome c oxidase subunit III;
pfam_id COX3;
pfam_target db:Pfam-A.hmm|PF00510.18 evalue:4.5e-13 score:48.9 best_domain_score:39.0 name:COX3;
sprot_desc Probable cytochrome c oxidase subunit 3;
sprot_id sp|Q4UKK0|COX3_RICFE;
sprot_target db:uniprot_sprot|sp|Q4UKK0|COX3_RICFE 33 257 evalue:2.0e-13 qcov:87.20 identity:28.40;
tm_num 5;
51435 52211 transmembrane_helix
ID metaerg.pl|05408
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i51534-51602o51711-51779i51813-51881o52017-52085i52146-52205o;
52231 52560 CDS
ID metaerg.pl|05409
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032806.1 1 109 evalue:1.4e-49 qcov:100.00 identity:95.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF03626;
pfam_desc Prokaryotic Cytochrome C oxidase subunit IV;
pfam_id COX4_pro;
pfam_target db:Pfam-A.hmm|PF03626.14 evalue:1.6e-13 score:50.1 best_domain_score:49.8 name:COX4_pro;
tm_num 2;
52231 52560 transmembrane_helix
ID metaerg.pl|05410
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i52312-52407o52465-52524i;
52641 53309 CDS
ID metaerg.pl|05411
allgo_ids GO:0016209; GO:0016491; GO:0055114;
allko_ids K03386;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134547.1 1 222 evalue:3.0e-112 qcov:100.00 identity:88.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF00578; PF02630;
pfam_desc AhpC/TSA family; SCO1/SenC;
pfam_id AhpC-TSA; SCO1-SenC;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:1e-06 score:27.9 best_domain_score:27.6 name:AhpC-TSA; db:Pfam-A.hmm|PF02630.14 evalue:1.1e-31 score:108.7 best_domain_score:108.4 name:SCO1-SenC;
tm_num 1;
52641 53309 transmembrane_helix
ID metaerg.pl|05412
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology o52650-52718i;
53296 53850 CDS
ID metaerg.pl|05413
allgo_ids GO:0016021; GO:0005886;
allko_ids K08976;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134546.1 1 184 evalue:1.4e-83 qcov:100.00 identity:89.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF04238;
pfam_desc Protein of unknown function (DUF420);
pfam_id DUF420;
pfam_target db:Pfam-A.hmm|PF04238.12 evalue:9.8e-45 score:151.3 best_domain_score:151.3 name:DUF420;
sprot_desc Uncharacterized membrane protein YozB;
sprot_id sp|O31845|YOZB_BACSU;
sprot_target db:uniprot_sprot|sp|O31845|YOZB_BACSU 8 182 evalue:9.4e-34 qcov:95.10 identity:42.90;
tm_num 5;
53296 53850 transmembrane_helix
ID metaerg.pl|05414
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i53332-53400o53443-53511i53530-53598o53656-53724i53761-53829o;
54030 54293 CDS
ID metaerg.pl|05415
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134545.1 1 87 evalue:1.5e-30 qcov:100.00 identity:78.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
sp YES;
tm_num 2;
54030 54098 signal_peptide
ID metaerg.pl|05416
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
54030 54293 transmembrane_helix
ID metaerg.pl|05417
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i54048-54101o54180-54239i;
54347 58054 CDS
ID metaerg.pl|05418
allgo_ids GO:0000155; GO:0007165;
allko_ids K07675; K07717; K07647; K10942; K13040; K04757; K11629; K10125; K02476; K11357; K12767; K11383; K02486; K11520; K14509; K07769; K07644; K07709; K13532; K07650; K06379; K10681; K01769; K10715; K07678; K02030; K11527; K13587; K07701; K07638; K07653; K07636; K02482; K08801; K02480; K07640; K07710; K07656; K01768; K02489; K07697; K11614; K07716; K08479; K07674; K10916; K02668; K03388; K02491; K11231; K07643; K07704; K08282; K07708; K07645; K07677; K11356; K11640; K02484; K07642; K11711; K07651; K07718; K07698; K07679; K02478; K07648; K07711; K08884; K13533; K11328; K07778; K11354; K11633; K07768; K07652; K07641; K13598; K07646; K07639; K08475; K07673; K03407; K07654; K07649; K00936;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134544.1 1 1235 evalue:0.0e+00 qcov:100.00 identity:91.60;
kegg_pathway_id 03090; 02020; 04011; 05111; 00790; 00230;
kegg_pathway_name Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Vibrio cholerae pathogenic cycle; Folate biosynthesis; Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF02518; PF14501; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GHKL domain; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HATPase_c_5; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:3.4e-20 score:71.9 best_domain_score:70.8 name:HATPase_c; db:Pfam-A.hmm|PF14501.6 evalue:4.2e-05 score:22.6 best_domain_score:20.2 name:HATPase_c_5; db:Pfam-A.hmm|PF00512.25 evalue:7.7e-07 score:28.3 best_domain_score:26.9 name:HisKA;
sp YES;
tm_num 11;
54347 54439 signal_peptide
ID metaerg.pl|05419
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
54347 58054 transmembrane_helix
ID metaerg.pl|05420
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i54365-54424o54962-55018i55055-55123o55208-55276i55313-55381o55457-55525i55562-55630o55715-55783i56516-56584o56627-56695i57128-57196o;
58125 61601 CDS
ID metaerg.pl|05421
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134687.1 2 1158 evalue:0.0e+00 qcov:99.90 identity:91.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
sp YES;
58125 58196 signal_peptide
ID metaerg.pl|05422
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
62267 61593 CDS
ID metaerg.pl|05423
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134543.1 1 216 evalue:8.3e-94 qcov:96.40 identity:77.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF06439;
pfam_desc Domain of Unknown Function (DUF1080);
pfam_id DUF1080;
pfam_target db:Pfam-A.hmm|PF06439.11 evalue:5.2e-39 score:133.5 best_domain_score:133.2 name:DUF1080;
sp YES;
61593 61658 signal_peptide
ID metaerg.pl|05424
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
62416 63051 CDS
ID metaerg.pl|05425
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134542.1 1 210 evalue:8.9e-106 qcov:99.50 identity:86.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
63095 65533 CDS
ID metaerg.pl|05426
allec_ids 7.2.2.8; 3.6.3.-;
allgo_ids GO:0030001; GO:0046872; GO:0016021; GO:0005886; GO:0005524; GO:0019829; GO:0005507; GO:0006825;
allko_ids K17686;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134541.1 1 812 evalue:0.0e+00 qcov:100.00 identity:88.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PWY-6166; PWY-6188; PWY-6135; PWY-6171; PWY-6113; PWYG-321;
metacyc_pathway_name ; ; ; ; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF12156; PF00122; PF00403; PF00702;
pfam_desc Putative metal-binding domain of cation transport ATPase; E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase;
pfam_id ATPase-cat_bd; E1-E2_ATPase; HMA; Hydrolase;
pfam_target db:Pfam-A.hmm|PF12156.8 evalue:5.3e-12 score:45.6 best_domain_score:44.3 name:ATPase-cat_bd; db:Pfam-A.hmm|PF00122.20 evalue:1.8e-32 score:111.6 best_domain_score:110.4 name:E1-E2_ATPase; db:Pfam-A.hmm|PF00403.26 evalue:1e-05 score:25.1 best_domain_score:23.1 name:HMA; db:Pfam-A.hmm|PF00702.26 evalue:4e-18 score:65.7 best_domain_score:65.1 name:Hydrolase;
sprot_desc Copper-exporting P-type ATPase;
sprot_id sp|Q5HL56|COPA_STAEQ;
sprot_target db:uniprot_sprot|sp|Q5HL56|COPA_STAEQ 68 792 evalue:4.1e-57 qcov:89.30 identity:24.60;
tigrfam_acc TIGR01494;
tigrfam_desc HAD ATPase, P-type, family IC;
tigrfam_name ATPase_P-type;
tigrfam_target db:TIGRFAMs.hmm|TIGR01494 evalue:7.9e-53 score:178.7 best_domain_score:174.7 name:TIGR01494;
tm_num 8;
63095 65533 transmembrane_helix
ID metaerg.pl|05427
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i63635-63703o63746-63799i63860-63919o63929-63982i64376-64444o64454-64522i65351-65419o65432-65500i;
65721 67853 CDS
ID metaerg.pl|05428
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0009060; GO:0016021; GO:0020037; GO:0055114;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032797.1 1 710 evalue:0.0e+00 qcov:100.00 identity:96.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metabolic_acc TIGR00780; TIGR00781;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, cbb3-type;gene:ccoN;; compound:Oxygen;process:Cytochrome c oxidase, cbb3-type;gene:ccoO;;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00115; PF02433;
pfam_desc Cytochrome C and Quinol oxidase polypeptide I; Cytochrome C oxidase, mono-heme subunit/FixO;
pfam_id COX1; FixO;
pfam_target db:Pfam-A.hmm|PF00115.20 evalue:1.1e-122 score:409.3 best_domain_score:409.3 name:COX1; db:Pfam-A.hmm|PF02433.15 evalue:1.1e-96 score:321.7 best_domain_score:321.1 name:FixO;
tigrfam_acc TIGR00780; TIGR00781;
tigrfam_desc cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase, cbb3-type, subunit II;
tigrfam_mainrole Energy metabolism; Energy metabolism;
tigrfam_name ccoN; ccoO;
tigrfam_sub1role Electron transport; Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR00780 evalue:4.4e-197 score:654.8 best_domain_score:654.3 name:TIGR00780; db:TIGRFAMs.hmm|TIGR00781 evalue:7.6e-75 score:250.7 best_domain_score:250.1 name:TIGR00781;
tm_num 13;
65721 67853 transmembrane_helix
ID metaerg.pl|05429
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i65781-65849o65892-65960i66021-66080o66108-66176i66210-66278o66336-66404i66423-66491o66534-66602i66639-66707o66750-66818i66876-66935o67026-67094i67209-67277o;
67865 68056 CDS
ID metaerg.pl|05430
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134538.1 1 63 evalue:2.8e-23 qcov:100.00 identity:93.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
tm_num 1;
67865 68056 transmembrane_helix
ID metaerg.pl|05431
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i67901-67969o;
68043 68978 CDS
ID metaerg.pl|05432
allgo_ids GO:0009055; GO:0020037;
allko_ids K02275; K05601; K15864; K05301; K00405; K00368;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032795.1 1 311 evalue:7.8e-151 qcov:100.00 identity:86.20;
kegg_pathway_id 00190; 00910; 00920;
kegg_pathway_name Oxidative phosphorylation; Nitrogen metabolism; Sulfur metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metabolic_acc TIGR00782;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, cbb3-type;gene:ccoP;;
metabolic_target db:metabolic.hmm|TIGR00782 evalue:2.4e-27 score:95.1 best_domain_score:94.6 name:TIGR00782;
pfam_acc PF13442; PF00034; PF14715;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c; N-terminal domain of cytochrome oxidase-cbb3, FixP;
pfam_id Cytochrome_CBB3; Cytochrom_C; FixP_N;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:1.3e-15 score:56.7 best_domain_score:54.4 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:1.4e-10 score:41.4 best_domain_score:38.2 name:Cytochrom_C; db:Pfam-A.hmm|PF14715.6 evalue:3e-16 score:58.1 best_domain_score:58.1 name:FixP_N;
sp YES;
tm_num 3;
68043 68108 signal_peptide
ID metaerg.pl|05433
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
68043 68978 transmembrane_helix
ID metaerg.pl|05434
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i68061-68129o68172-68240i68424-68492o;
69033 70451 CDS
ID metaerg.pl|05435
allgo_ids GO:0016021; GO:0005886; GO:0051539; GO:0046872; GO:0055114;
allko_ids K00123; K00443; K03388; K00176; K08349; K11181; K00124; K00205; K00441; K00171; K00226;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134536.1 1 471 evalue:1.7e-253 qcov:99.80 identity:91.30;
kegg_pathway_id 00620; 00633; 02020; 00630; 00790; 00680; 00650; 00640; 00720; 00010; 00240; 00020;
kegg_pathway_name Pyruvate metabolism; Trinitrotoluene degradation; Two-component system - General; Glyoxylate and dicarboxylate metabolism; Folate biosynthesis; Methane metabolism; Butanoate metabolism; Propanoate metabolism; Reductive carboxylate cycle (CO2 fixation); Glycolysis / Gluconeogenesis; Pyrimidine metabolism; Citrate cycle (TCA cycle);
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF13484; PF13534; PF13746; PF12801; PF12838; PF13187; PF11614;
pfam_desc 4Fe-4S double cluster binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; IG-like fold at C-terminal of FixG, putative oxidoreductase;
pfam_id Fer4_16; Fer4_17; Fer4_18; Fer4_5; Fer4_7; Fer4_9; FixG_C;
pfam_target db:Pfam-A.hmm|PF13484.6 evalue:2.2e-07 score:30.9 best_domain_score:21.9 name:Fer4_16; db:Pfam-A.hmm|PF13534.6 evalue:6.2e-07 score:29.1 best_domain_score:20.1 name:Fer4_17; db:Pfam-A.hmm|PF13746.6 evalue:9.9e-41 score:137.7 best_domain_score:137.0 name:Fer4_18; db:Pfam-A.hmm|PF12801.7 evalue:3.8e-14 score:51.6 best_domain_score:51.6 name:Fer4_5; db:Pfam-A.hmm|PF12838.7 evalue:6.3e-10 score:38.7 best_domain_score:27.4 name:Fer4_7; db:Pfam-A.hmm|PF13187.6 evalue:4.9e-08 score:32.3 best_domain_score:22.7 name:Fer4_9; db:Pfam-A.hmm|PF11614.8 evalue:9.7e-17 score:60.5 best_domain_score:59.9 name:FixG_C;
sprot_desc hypothetical protein;
sprot_id sp|P54932|RDXB_RHOS4;
sprot_target db:uniprot_sprot|sp|P54932|RDXB_RHOS4 25 408 evalue:1.7e-47 qcov:81.40 identity:33.60;
tigrfam_acc TIGR02745;
tigrfam_desc cytochrome c oxidase accessory protein CcoG;
tigrfam_name ccoG_rdxA_fixG;
tigrfam_target db:TIGRFAMs.hmm|TIGR02745 evalue:7.1e-125 score:416.5 best_domain_score:416.3 name:TIGR02745;
tm_num 5;
69033 70451 transmembrane_helix
ID metaerg.pl|05436
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i69168-69236o69294-69362i69522-69581o69624-69683i70050-70106o;
70478 70903 CDS
ID metaerg.pl|05437
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134535.1 1 141 evalue:3.5e-58 qcov:100.00 identity:80.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF05751;
pfam_desc FixH;
pfam_id FixH;
pfam_target db:Pfam-A.hmm|PF05751.11 evalue:3.2e-19 score:68.6 best_domain_score:68.4 name:FixH;
tm_num 1;
70478 70903 transmembrane_helix
ID metaerg.pl|05438
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology o70487-70555i;
70906 71610 CDS
ID metaerg.pl|05439
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134534.1 1 234 evalue:4.5e-119 qcov:100.00 identity:95.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF13386;
pfam_desc Cytochrome C biogenesis protein transmembrane region;
pfam_id DsbD_2;
pfam_target db:Pfam-A.hmm|PF13386.6 evalue:7e-49 score:165.7 best_domain_score:165.5 name:DsbD_2;
sp YES;
tm_num 6;
70906 70965 signal_peptide
ID metaerg.pl|05440
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
70906 71610 transmembrane_helix
ID metaerg.pl|05441
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology o70918-70986i71023-71091o71101-71169i71269-71337o71380-71448i71482-71550o;
73122 71761 CDS
ID metaerg.pl|05442
allec_ids 1.3.98.3; 1.3.99.22;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0051989; GO:0004109; GO:0046872; GO:0006782;
allko_ids K02495;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134533.1 1 453 evalue:8.8e-236 qcov:100.00 identity:85.40;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id HEMESYN2-PWY; PWY0-1415;
metacyc_pathway_name heme b biosynthesis II (anaerobic);; superpathway of heme b biosynthesis from uroporphyrinogen-III;;
metacyc_pathway_type Heme-b-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF04055;
pfam_desc Radical SAM superfamily;
pfam_id Radical_SAM;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:4.6e-16 score:58.9 best_domain_score:58.3 name:Radical_SAM;
sprot_desc Oxygen-independent coproporphyrinogen III oxidase;
sprot_id sp|P32131|HEMN_ECOLI;
sprot_target db:uniprot_sprot|sp|P32131|HEMN_ECOLI 7 453 evalue:1.7e-81 qcov:98.70 identity:36.90;
tigrfam_acc TIGR00538;
tigrfam_desc oxygen-independent coproporphyrinogen III oxidase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemN;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00538 evalue:3.5e-127 score:424.1 best_domain_score:423.9 name:TIGR00538;
73614 73540 tRNA
ID metaerg.pl|05443
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
name tRNA_Ala_ggc;
74412 73792 CDS
ID metaerg.pl|05444
allgo_ids GO:0003677; GO:0046872; GO:0006310; GO:0006281;
allko_ids K06187;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134532.1 1 206 evalue:1.3e-101 qcov:100.00 identity:92.20;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF02132; PF01751; PF13662;
pfam_desc RecR protein; Toprim domain; Toprim domain;
pfam_id RecR; Toprim; Toprim_4;
pfam_target db:Pfam-A.hmm|PF02132.15 evalue:1.8e-16 score:58.6 best_domain_score:57.6 name:RecR; db:Pfam-A.hmm|PF01751.22 evalue:1.1e-05 score:24.8 best_domain_score:23.5 name:Toprim; db:Pfam-A.hmm|PF13662.6 evalue:4.6e-24 score:83.9 best_domain_score:81.0 name:Toprim_4;
sprot_desc Recombination protein RecR;
sprot_id sp|Q11W94|RECR_CYTH3;
sprot_target db:uniprot_sprot|sp|Q11W94|RECR_CYTH3 1 200 evalue:9.7e-72 qcov:97.10 identity:66.00;
tigrfam_acc TIGR00615;
tigrfam_desc recombination protein RecR;
tigrfam_mainrole DNA metabolism;
tigrfam_name recR;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00615 evalue:5.1e-72 score:240.6 best_domain_score:240.5 name:TIGR00615;
74716 74423 CDS
ID metaerg.pl|05445
allgo_ids GO:0030163;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134531.1 1 97 evalue:8.9e-45 qcov:100.00 identity:91.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF02617;
pfam_desc ATP-dependent Clp protease adaptor protein ClpS;
pfam_id ClpS;
pfam_target db:Pfam-A.hmm|PF02617.17 evalue:4.2e-18 score:64.1 best_domain_score:63.9 name:ClpS;
74770 76215 CDS
ID metaerg.pl|05446
allgo_ids GO:0016020; GO:0022857; GO:0055085;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134530.1 1 481 evalue:1.2e-254 qcov:100.00 identity:93.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF00474;
pfam_desc Sodium:solute symporter family;
pfam_id SSF;
pfam_target db:Pfam-A.hmm|PF00474.17 evalue:1.7e-19 score:69.2 best_domain_score:68.7 name:SSF;
tm_num 13;
74770 76215 transmembrane_helix
ID metaerg.pl|05447
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology o74782-74835i74893-74952o74995-75063i75124-75192o75220-75279i75298-75366o75469-75522i75583-75651o75709-75777i75889-75945o75955-76023i76057-76113o76141-76200i;
76599 76216 CDS
ID metaerg.pl|05448
allgo_ids GO:0043565;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134529.1 1 127 evalue:2.7e-57 qcov:100.00 identity:93.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF12844; PF01381; PF13560;
pfam_desc Helix-turn-helix domain; Helix-turn-helix; Helix-turn-helix domain;
pfam_id HTH_19; HTH_3; HTH_31;
pfam_target db:Pfam-A.hmm|PF12844.7 evalue:3.3e-09 score:35.9 best_domain_score:35.9 name:HTH_19; db:Pfam-A.hmm|PF01381.22 evalue:1.3e-13 score:50.0 best_domain_score:49.7 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:4.6e-07 score:29.3 best_domain_score:28.8 name:HTH_31;
77052 76711 CDS
ID metaerg.pl|05449
allgo_ids GO:0003824; GO:0006281;
allko_ids K10778; K13529; K00567; K13531;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134528.1 1 112 evalue:1.3e-47 qcov:99.10 identity:85.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF01035;
pfam_desc 6-O-methylguanine DNA methyltransferase, DNA binding domain;
pfam_id DNA_binding_1;
pfam_target db:Pfam-A.hmm|PF01035.20 evalue:2.4e-22 score:78.1 best_domain_score:77.9 name:DNA_binding_1;
77917 77039 CDS
ID metaerg.pl|05450
allgo_ids GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134527.1 1 292 evalue:7.6e-132 qcov:100.00 identity:86.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF00924;
pfam_desc Mechanosensitive ion channel;
pfam_id MS_channel;
pfam_target db:Pfam-A.hmm|PF00924.18 evalue:3.7e-25 score:87.9 best_domain_score:87.9 name:MS_channel;
tm_num 4;
77917 77039 transmembrane_helix
ID metaerg.pl|05451
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i77096-77164o77192-77245i77306-77374o77417-77485i;
77966 78643 CDS
ID metaerg.pl|05452
allec_ids 1.5.1.34;
allgo_ids GO:0003824; GO:0050662; GO:0005737; GO:0004155; GO:0070404; GO:0070402; GO:0006559; GO:0006729;
allko_ids K00357;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134526.1 1 225 evalue:5.2e-112 qcov:100.00 identity:91.10;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PHENYLALANINE-DEG1-PWY;
metacyc_pathway_name L-phenylalanine degradation I (aerobic);;
metacyc_pathway_type PHENYLALANINE-DEG;;
pfam_acc PF00106; PF13561; PF01370; PF04321;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; RmlD substrate binding domain;
pfam_id adh_short; adh_short_C2; Epimerase; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:7.3e-26 score:90.1 best_domain_score:89.8 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:8.8e-23 score:80.3 best_domain_score:79.9 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:4.2e-10 score:38.7 best_domain_score:35.6 name:Epimerase; db:Pfam-A.hmm|PF04321.17 evalue:6.8e-05 score:21.3 best_domain_score:19.5 name:RmlD_sub_bind;
sprot_desc Dihydropteridine reductase;
sprot_id sp|Q3T0Z7|DHPR_BOVIN;
sprot_target db:uniprot_sprot|sp|Q3T0Z7|DHPR_BOVIN 3 206 evalue:1.4e-10 qcov:90.70 identity:29.10;
78651 79349 CDS
ID metaerg.pl|05453
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134525.1 5 232 evalue:3.0e-99 qcov:98.30 identity:87.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF10988;
pfam_desc Putative auto-transporter adhesin, head GIN domain;
pfam_id DUF2807;
pfam_target db:Pfam-A.hmm|PF10988.8 evalue:1.7e-35 score:121.7 best_domain_score:121.3 name:DUF2807;
sp YES;
78651 78725 signal_peptide
ID metaerg.pl|05454
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
79346 79798 CDS
ID metaerg.pl|05455
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134524.1 1 150 evalue:8.6e-63 qcov:100.00 identity:79.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF12893;
pfam_desc Putative lumazine-binding;
pfam_id Lumazine_bd_2;
pfam_target db:Pfam-A.hmm|PF12893.7 evalue:6.2e-06 score:26.1 best_domain_score:25.6 name:Lumazine_bd_2;
sp YES;
79346 79408 signal_peptide
ID metaerg.pl|05456
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
80277 79858 CDS
ID metaerg.pl|05457
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134523.1 1 139 evalue:1.4e-54 qcov:100.00 identity:73.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF03724;
pfam_desc META domain;
pfam_id META;
pfam_target db:Pfam-A.hmm|PF03724.16 evalue:7.9e-23 score:79.7 best_domain_score:79.5 name:META;
sp YES;
79858 79911 lipoprotein_signal_peptide
ID metaerg.pl|05458
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
80753 80514 CDS
ID metaerg.pl|05459
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
80807 83260 CDS
ID metaerg.pl|05460
allec_ids 2.7.2.4; 1.1.1.3;
allgo_ids GO:0006520; GO:0055114; GO:0009507; GO:0009570; GO:0004072; GO:0005524; GO:0004412; GO:0050661; GO:0009090; GO:0009089; GO:0009086; GO:0009088;
allko_ids K12525; K00928; K00003; K12524; K12526;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032781.1 1 817 evalue:0.0e+00 qcov:100.00 identity:92.20;
kegg_pathway_id 00300; 00260;
kegg_pathway_name Lysine biosynthesis; Glycine, serine and threonine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id METSYN-PWY; HOMOSERSYN-PWY; THRESYN-PWY; PWY-724; PWY-6565; PWY-5097; PWY-6562; PWY0-781; PWY-3001; PWY-5345; P101-PWY; P4-PWY; PWY-5347; PWY-6559; PWY-2941; DAPLYSINESYN-PWY; MET-SAM-PWY;
metacyc_pathway_name superpathway of L-homoserine and L-methionine biosynthesis;; L-homoserine biosynthesis;; superpathway of L-threonine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of polyamine biosynthesis III;; L-lysine biosynthesis VI;; norspermidine biosynthesis;; aspartate superpathway;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-methionine biosynthesis (by sulfhydrylation);; ectoine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-methionine biosynthesis (transsulfuration);; spermidine biosynthesis II;; L-lysine biosynthesis II;; L-lysine biosynthesis I;; superpathway of S-adenosyl-L-methionine biosynthesis;;
metacyc_pathway_type Methionine-De-novo-Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis;; Super-Pathways; THREONINE-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Polyamine-Biosynthesis;; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Spermidine-Biosynthesis;; LYSINE-SYN;; LYSINE-SYN;; Super-Pathways;;
pfam_acc PF00696; PF01842; PF13840; PF00742; PF03447;
pfam_desc Amino acid kinase family; ACT domain; ACT domain ; Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain;
pfam_id AA_kinase; ACT; ACT_7; Homoserine_dh; NAD_binding_3;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:3.7e-48 score:163.4 best_domain_score:162.3 name:AA_kinase; db:Pfam-A.hmm|PF01842.25 evalue:1.4e-14 score:52.8 best_domain_score:26.7 name:ACT; db:Pfam-A.hmm|PF13840.6 evalue:3.6e-14 score:51.5 best_domain_score:30.4 name:ACT_7; db:Pfam-A.hmm|PF00742.19 evalue:2.1e-54 score:183.3 best_domain_score:182.3 name:Homoserine_dh; db:Pfam-A.hmm|PF03447.16 evalue:4.3e-19 score:68.5 best_domain_score:66.7 name:NAD_binding_3;
sprot_desc Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic;
sprot_id sp|O81852|AKH2_ARATH;
sprot_target db:uniprot_sprot|sp|O81852|AKH2_ARATH 5 815 evalue:1.1e-158 qcov:99.30 identity:39.20;
tigrfam_acc TIGR00657;
tigrfam_desc aspartate kinase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name asp_kinases;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00657 evalue:1.7e-119 score:399.0 best_domain_score:398.5 name:TIGR00657;
83262 84194 CDS
ID metaerg.pl|05461
allec_ids 2.7.1.39;
allgo_ids GO:0005524; GO:0005737; GO:0004413; GO:0009088;
allko_ids K00849; K00872;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134521.1 1 309 evalue:9.8e-154 qcov:99.70 identity:90.90;
kegg_pathway_id 00260; 00052;
kegg_pathway_name Glycine, serine and threonine metabolism; Galactose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id HOMOSER-THRESYN-PWY; PWY-3001; P4-PWY; PWY0-781; THRESYN-PWY; PWY-724;
metacyc_pathway_name L-threonine biosynthesis;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; aspartate superpathway;; superpathway of L-threonine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;;
metacyc_pathway_type THREONINE-BIOSYNTHESIS;; ISOLEUCINE-SYN; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; Super-Pathways; THREONINE-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF08544; PF00288;
pfam_desc GHMP kinases C terminal ; GHMP kinases N terminal domain;
pfam_id GHMP_kinases_C; GHMP_kinases_N;
pfam_target db:Pfam-A.hmm|PF08544.13 evalue:1.2e-09 score:37.6 best_domain_score:36.2 name:GHMP_kinases_C; db:Pfam-A.hmm|PF00288.26 evalue:1.4e-14 score:53.3 best_domain_score:53.3 name:GHMP_kinases_N;
sp YES;
sprot_desc Homoserine kinase;
sprot_id sp|B3QWX6|KHSE_CHLT3;
sprot_target db:uniprot_sprot|sp|B3QWX6|KHSE_CHLT3 1 308 evalue:2.4e-74 qcov:99.40 identity:47.00;
tigrfam_acc TIGR00191;
tigrfam_desc homoserine kinase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name thrB;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00191 evalue:1.5e-64 score:216.9 best_domain_score:216.7 name:TIGR00191;
83262 83309 lipoprotein_signal_peptide
ID metaerg.pl|05462
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
84235 85542 CDS
ID metaerg.pl|05463
allec_ids 4.2.3.1;
allgo_ids GO:0005829; GO:0030170; GO:0004795; GO:0009088;
allko_ids K01733;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134520.1 1 433 evalue:3.7e-207 qcov:99.50 identity:81.10;
kegg_pathway_id 00260; 00750;
kegg_pathway_name Glycine, serine and threonine metabolism; Vitamin B6 metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id P4-PWY; PWY-3001; HOMOSER-THRESYN-PWY; PWY0-781; PWY-724; THRESYN-PWY;
metacyc_pathway_name superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-isoleucine biosynthesis I;; L-threonine biosynthesis;; aspartate superpathway;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of L-threonine biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; THREONINE-BIOSYNTHESIS;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways; THREONINE-BIOSYNTHESIS;;
pfam_acc PF00291; PF14821;
pfam_desc Pyridoxal-phosphate dependent enzyme; Threonine synthase N terminus;
pfam_id PALP; Thr_synth_N;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:3.5e-21 score:75.1 best_domain_score:74.7 name:PALP; db:Pfam-A.hmm|PF14821.6 evalue:3e-19 score:68.2 best_domain_score:67.0 name:Thr_synth_N;
sprot_desc Threonine synthase;
sprot_id sp|P00934|THRC_ECOLI;
sprot_target db:uniprot_sprot|sp|P00934|THRC_ECOLI 1 430 evalue:1.3e-94 qcov:98.90 identity:43.50;
tigrfam_acc TIGR00260;
tigrfam_desc threonine synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name thrC;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00260 evalue:6.1e-82 score:274.6 best_domain_score:273.8 name:TIGR00260;
87551 85596 CDS
ID metaerg.pl|05464
allgo_ids GO:0004222; GO:0006508;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134519.1 1 651 evalue:4.0e-213 qcov:100.00 identity:60.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF01435; PF05569;
pfam_desc Peptidase family M48; BlaR1 peptidase M56;
pfam_id Peptidase_M48; Peptidase_M56;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:1.5e-07 score:30.6 best_domain_score:27.4 name:Peptidase_M48; db:Pfam-A.hmm|PF05569.11 evalue:3.5e-34 score:117.6 best_domain_score:116.6 name:Peptidase_M56;
tm_num 2;
87551 85596 transmembrane_helix
ID metaerg.pl|05465
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology o85638-85706i85743-85811o;
87925 87551 CDS
ID metaerg.pl|05466
allgo_ids GO:0003677; GO:0045892;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134518.1 1 124 evalue:9.3e-55 qcov:100.00 identity:88.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF03965;
pfam_desc Penicillinase repressor;
pfam_id Penicillinase_R;
pfam_target db:Pfam-A.hmm|PF03965.16 evalue:6.1e-26 score:90.3 best_domain_score:90.1 name:Penicillinase_R;
88138 89232 CDS
ID metaerg.pl|05467
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134686.1 1 364 evalue:8.0e-171 qcov:100.00 identity:79.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF14054;
pfam_desc Domain of unknown function (DUF4249);
pfam_id DUF4249;
pfam_target db:Pfam-A.hmm|PF14054.6 evalue:2.4e-40 score:138.2 best_domain_score:138.0 name:DUF4249;
sp YES;
88138 88185 lipoprotein_signal_peptide
ID metaerg.pl|05468
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
89232 90338 CDS
ID metaerg.pl|05469
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_016255660.1 1 365 evalue:9.8e-185 qcov:99.20 identity:83.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF14054;
pfam_desc Domain of unknown function (DUF4249);
pfam_id DUF4249;
pfam_target db:Pfam-A.hmm|PF14054.6 evalue:1.1e-37 score:129.5 best_domain_score:129.2 name:DUF4249;
sp YES;
tm_num 1;
89232 89288 lipoprotein_signal_peptide
ID metaerg.pl|05470
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
89232 90338 transmembrane_helix
ID metaerg.pl|05471
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
topology i89244-89309o;
90348 91820 CDS
ID metaerg.pl|05472
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032774.1 8 490 evalue:3.1e-210 qcov:98.60 identity:71.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF13415; PF01833;
pfam_desc Galactose oxidase, central domain; IPT/TIG domain;
pfam_id Kelch_3; TIG;
pfam_target db:Pfam-A.hmm|PF13415.6 evalue:8.4e-09 score:34.8 best_domain_score:24.3 name:Kelch_3; db:Pfam-A.hmm|PF01833.24 evalue:0.00011 score:21.4 best_domain_score:20.5 name:TIG;
sp YES;
90348 90404 lipoprotein_signal_peptide
ID metaerg.pl|05473
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
91869 92963 CDS
ID metaerg.pl|05474
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032773.1 1 364 evalue:1.2e-174 qcov:100.00 identity:81.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF14054;
pfam_desc Domain of unknown function (DUF4249);
pfam_id DUF4249;
pfam_target db:Pfam-A.hmm|PF14054.6 evalue:8.1e-39 score:133.2 best_domain_score:132.9 name:DUF4249;
sp YES;
91869 91916 lipoprotein_signal_peptide
ID metaerg.pl|05475
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
93072 94175 CDS
ID metaerg.pl|05476
allec_ids 1.3.1.-;
allgo_ids GO:0010181; GO:0016491; GO:0055114; GO:0005829; GO:0034567; GO:0008748; GO:0046857; GO:0046256; GO:0018937; GO:0006805;
allko_ids K00219; K00540; K10797; K10680;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032772.1 1 367 evalue:7.5e-193 qcov:100.00 identity:89.60;
kegg_pathway_id 00360; 00633;
kegg_pathway_name Phenylalanine metabolism; Trinitrotoluene degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
metacyc_pathway_id PWY-3461; PWY-5466; PWY-5972; PWY5F9-3233; PWY-5367; PWY-5729; PWY-5393; HCAMHPDEG-PWY; PWY-3481; PWY-6088; PWY1A0-6325; PWY-5064; PWY-5063; PWY-5863;
metacyc_pathway_name L-tyrosine biosynthesis II;; matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);; phthalate degradation (aerobic);; petroselinate biosynthesis;; vestitol and sativan biosynthesis;; raspberry ketone biosynthesis;; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; 3-chlorobenzoate degradation I (via chlorocatechol);; actinorhodin biosynthesis;; chlorophyll a biosynthesis II;; phytyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;;
metacyc_pathway_type TYROSINE-SYN;; LIGNAN-SYN;; Stearate-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Unsaturated-Fatty-Acids-Biosynthesis;; ISOFLAVONOID-SYN;; POLYKETIDE-SYN;; Phenolic-Compounds-Degradation;; Amino-Acid-Biosynthesis; Super-Pathways;; 3-Chlorobenzoate-Degradation;; Antibiotic-Biosynthesis;; Chlorophyll-a-Biosynthesis;; Phytyl-Diphosphate-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF00724;
pfam_desc NADH:flavin oxidoreductase / NADH oxidase family;
pfam_id Oxidored_FMN;
pfam_target db:Pfam-A.hmm|PF00724.20 evalue:4.1e-81 score:272.1 best_domain_score:272.0 name:Oxidored_FMN;
sprot_desc N-ethylmaleimide reductase;
sprot_id sp|P77258|NEMA_ECOLI;
sprot_target db:uniprot_sprot|sp|P77258|NEMA_ECOLI 1 362 evalue:8.9e-76 qcov:98.60 identity:41.80;
94226 95014 CDS
ID metaerg.pl|05477
allgo_ids GO:0005794; GO:0005739; GO:0007030; GO:0009306;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_040490746.1 1 262 evalue:5.6e-126 qcov:100.00 identity:81.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF05742;
pfam_desc Transport and Golgi organisation 2;
pfam_id TANGO2;
pfam_target db:Pfam-A.hmm|PF05742.12 evalue:6.4e-67 score:225.5 best_domain_score:225.3 name:TANGO2;
sprot_desc Transport and Golgi organization 2 homolog;
sprot_id sp|P54797|TNG2_MOUSE;
sprot_target db:uniprot_sprot|sp|P54797|TNG2_MOUSE 1 255 evalue:6.6e-33 qcov:97.30 identity:34.50;
95030 96001 CDS
ID metaerg.pl|05478
allec_ids 1.8.-.-;
allgo_ids GO:0071949;
allko_ids K00384; K03388; K00302;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032770.1 1 323 evalue:8.3e-172 qcov:100.00 identity:90.10;
kegg_pathway_id 00790; 00260; 00240;
kegg_pathway_name Folate biosynthesis; Glycine, serine and threonine metabolism; Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF00890; PF01494; PF00743; PF03486; PF13434; PF00070; PF07992; PF13738;
pfam_desc FAD binding domain; FAD binding domain; Flavin-binding monooxygenase-like; HI0933-like protein; L-lysine 6-monooxygenase (NADPH-requiring); Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id FAD_binding_2; FAD_binding_3; FMO-like; HI0933_like; K_oxygenase; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:8.2e-06 score:24.4 best_domain_score:21.7 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:1.3e-05 score:23.8 best_domain_score:18.7 name:FAD_binding_3; db:Pfam-A.hmm|PF00743.19 evalue:7.3e-06 score:23.9 best_domain_score:17.6 name:FMO-like; db:Pfam-A.hmm|PF03486.14 evalue:1.5e-06 score:26.5 best_domain_score:14.5 name:HI0933_like; db:Pfam-A.hmm|PF13434.6 evalue:2.5e-08 score:32.7 best_domain_score:26.5 name:K_oxygenase; db:Pfam-A.hmm|PF00070.27 evalue:3.4e-06 score:26.8 best_domain_score:15.8 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:3.5e-26 score:91.3 best_domain_score:91.1 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:3.9e-96 score:321.1 best_domain_score:320.9 name:Pyr_redox_3;
sprot_desc hypothetical protein;
sprot_id sp|P50736|YPDA_BACSU;
sprot_target db:uniprot_sprot|sp|P50736|YPDA_BACSU 11 320 evalue:4.6e-68 qcov:96.00 identity:41.70;
tigrfam_acc TIGR04018;
tigrfam_desc putative bacillithiol system oxidoreductase, YpdA family;
tigrfam_mainrole Unknown function;
tigrfam_name Bthiol_YpdA;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR04018 evalue:2e-143 score:476.1 best_domain_score:475.9 name:TIGR04018;
98895 96763 CDS
ID metaerg.pl|05479
allgo_ids GO:0009055; GO:0020037;
allko_ids K08860; K05301; K00405; K11715; K00368; K00114; K05358; K15864; K08852; K14028;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034257.1 7 710 evalue:0.0e+00 qcov:99.20 identity:86.80;
kegg_pathway_id 00910; 00190; 00631; 00680; 00650; 00640; 00920; 00010; 00400;
kegg_pathway_name Nitrogen metabolism; Oxidative phosphorylation; 1,2-Dichloroethane degradation; Methane metabolism; Butanoate metabolism; Propanoate metabolism; Sulfur metabolism; Glycolysis / Gluconeogenesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF13442; PF00034; PF01011; PF13360; PF13570;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c; PQQ enzyme repeat; PQQ-like domain; PQQ-like domain;
pfam_id Cytochrome_CBB3; Cytochrom_C; PQQ; PQQ_2; PQQ_3;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:5.1e-12 score:45.2 best_domain_score:43.9 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:8.7e-06 score:26.0 best_domain_score:24.0 name:Cytochrom_C; db:Pfam-A.hmm|PF01011.21 evalue:4e-37 score:123.6 best_domain_score:24.3 name:PQQ; db:Pfam-A.hmm|PF13360.6 evalue:4.1e-19 score:68.3 best_domain_score:31.6 name:PQQ_2; db:Pfam-A.hmm|PF13570.6 evalue:7.3e-13 score:47.8 best_domain_score:19.1 name:PQQ_3;
sp YES;
96763 96819 lipoprotein_signal_peptide
ID metaerg.pl|05480
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
100777 99125 CDS
ID metaerg.pl|05481
allec_ids 3.6.3.41;
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0019843; GO:0000049; GO:0045900; GO:0006412;
allko_ids K01997; K02003; K02010; K02056; K09817; K05847; K02006; K02052; K02004; K02074; K02032; K02017; K05776; K10820; K02071; K06861; K01996; K10441; K02045; K11072; K01995; K02049; K01998; K10111; K10545; K10562; K05816; K06857; K09687; K02013; K02193; K01990; K10542; K02023; K10539; K02000; K06020;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035618.1 1 550 evalue:3.6e-308 qcov:100.00 identity:96.50;
kegg_pathway_id 02010; 00910;
kegg_pathway_name ABC transporters - General; Nitrogen metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF13304; PF00005; PF12848; PF01926;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; ABC transporter; 50S ribosome-binding GTPase;
pfam_id AAA_21; ABC_tran; ABC_tran_Xtn; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:5.3e-17 score:61.8 best_domain_score:23.2 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.3e-53 score:179.6 best_domain_score:90.9 name:ABC_tran; db:Pfam-A.hmm|PF12848.7 evalue:1.8e-14 score:52.7 best_domain_score:45.4 name:ABC_tran_Xtn; db:Pfam-A.hmm|PF01926.23 evalue:3.4e-06 score:26.4 best_domain_score:16.1 name:MMR_HSR1;
sprot_desc Energy-dependent translational throttle protein EttA;
sprot_id sp|P0A9W4|ETTA_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9W4|ETTA_ECO57 1 549 evalue:1.6e-193 qcov:99.80 identity:61.10;
tigrfam_acc TIGR01189; TIGR03719;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA; ATP-binding cassette protein, ChvD family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA; ABC_ABC_ChvD;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:2.1e-43 score:147.5 best_domain_score:69.1 name:TIGR01189; db:TIGRFAMs.hmm|TIGR03719 evalue:6.7e-285 score:945.0 best_domain_score:944.9 name:TIGR03719;
100942 102189 CDS
ID metaerg.pl|05482
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132850.1 1 415 evalue:7.8e-215 qcov:100.00 identity:92.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF03993;
pfam_desc Domain of Unknown Function (DUF349);
pfam_id DUF349;
pfam_target db:Pfam-A.hmm|PF03993.12 evalue:7.7e-27 score:92.6 best_domain_score:54.2 name:DUF349;
102266 102487 CDS
ID metaerg.pl|05483
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_008625540.1 1 73 evalue:3.7e-35 qcov:100.00 identity:98.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF11387;
pfam_desc Protein of unknown function (DUF2795);
pfam_id DUF2795;
pfam_target db:Pfam-A.hmm|PF11387.8 evalue:1.4e-16 score:59.6 best_domain_score:59.0 name:DUF2795;
103011 102514 CDS
ID metaerg.pl|05484
allgo_ids GO:0003677; GO:0005737; GO:0000160; GO:0006355;
allko_ids K07705;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106132851.1 1 165 evalue:4.2e-71 qcov:100.00 identity:84.80;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.91231; 14.9794; 2.69689; 28.9463; 1.35779;
pfam_acc PF04397;
pfam_desc LytTr DNA-binding domain;
pfam_id LytTR;
pfam_target db:Pfam-A.hmm|PF04397.15 evalue:1.9e-29 score:101.0 best_domain_score:100.3 name:LytTR;
sprot_desc Sensory transduction protein LytT;
sprot_id sp|P94514|LYTT_BACSU;
sprot_target db:uniprot_sprot|sp|P94514|LYTT_BACSU 1 165 evalue:3.6e-24 qcov:100.00 identity:35.80;
>Feature NODE_33_length_102255_cov_91.3723
951 1 CDS
ID metaerg.pl|05485
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015031;
allko_ids K02033; K13890;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469478.1 1 316 evalue:3.2e-168 qcov:100.00 identity:98.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.5e-37 score:128.4 best_domain_score:128.4 name:BPD_transp_1;
sprot_desc Dipeptide transport system permease protein DppB;
sprot_id sp|P94311|DPPB_BACPE;
sprot_target db:uniprot_sprot|sp|P94311|DPPB_BACPE 1 315 evalue:1.0e-51 qcov:99.70 identity:37.30;
tm_num 6;
951 1 transmembrane_helix
ID metaerg.pl|05486
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i25-93o304-372i433-501o544-612i724-792o850-918i;
2654 1026 CDS
ID metaerg.pl|05487
allko_ids K13889; K02035;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469477.1 1 541 evalue:2.1e-284 qcov:99.80 identity:87.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:7e-65 score:218.6 best_domain_score:218.3 name:SBP_bac_5;
sp YES;
1026 1103 signal_peptide
ID metaerg.pl|05488
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
6275 2877 CDS
ID metaerg.pl|05489
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468346.1 1 1131 evalue:1.1e-274 qcov:99.90 identity:51.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF13514;
pfam_desc AAA domain;
pfam_id AAA_27;
pfam_target db:Pfam-A.hmm|PF13514.6 evalue:8.6e-68 score:227.2 best_domain_score:227.2 name:AAA_27;
7495 6275 CDS
ID metaerg.pl|05490
allgo_ids GO:0016787; GO:0046872;
allko_ids K03547;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_100319195.1 1 403 evalue:2.8e-148 qcov:99.30 identity:68.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:2.4e-13 score:50.3 best_domain_score:49.3 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:2.2e-07 score:30.5 best_domain_score:28.5 name:Metallophos_2;
sprot_desc Uncharacterized metallophosphoesterase YhaO;
sprot_id sp|O07522|YHAO_BACSU;
sprot_target db:uniprot_sprot|sp|O07522|YHAO_BACSU 5 366 evalue:3.5e-33 qcov:89.20 identity:31.80;
7771 8241 CDS
ID metaerg.pl|05491
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798229.1 25 155 evalue:4.2e-44 qcov:84.00 identity:64.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF09411;
pfam_desc Lipid A 3-O-deacylase (PagL);
pfam_id PagL;
pfam_target db:Pfam-A.hmm|PF09411.10 evalue:1.1e-10 score:41.0 best_domain_score:40.8 name:PagL;
sp YES;
7771 7830 signal_peptide
ID metaerg.pl|05492
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
8967 8245 CDS
ID metaerg.pl|05493
allec_ids 3.5.1.-;
allgo_ids GO:0070403; GO:0005737; GO:0034979; GO:0036054; GO:0036055; GO:0008270;
allko_ids K12410;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795885.1 1 235 evalue:4.0e-110 qcov:97.90 identity:85.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-5784; LYSDEGII-PWY; PWY-5327; PWY-1822; PWY-0; PWY-6548;
metacyc_pathway_name indole-3-acetate inactivation VIII;; L-lysine degradation III;; superpathway of L-lysine degradation;; indole-3-acetate activation I;; putrescine degradation III;; ;
metacyc_pathway_type Indole-3-Acetate-Inactivation;; LYSINE-DEG;; LYSINE-DEG; Super-Pathways;; Activation;; Putrescine-Degradation;; ;
pfam_acc PF02146;
pfam_desc Sir2 family;
pfam_id SIR2;
pfam_target db:Pfam-A.hmm|PF02146.17 evalue:2.4e-44 score:150.6 best_domain_score:150.4 name:SIR2;
sprot_desc NAD-dependent protein deacylase;
sprot_id sp|Q9A2S6|NPD_CAUVC;
sprot_target db:uniprot_sprot|sp|Q9A2S6|NPD_CAUVC 9 234 evalue:1.4e-69 qcov:94.20 identity:58.30;
10825 8945 CDS
ID metaerg.pl|05494
allec_ids 3.1.25.-;
allgo_ids GO:0003677; GO:0005737; GO:0009380; GO:0009381; GO:0006289; GO:0009432;
allko_ids K03703;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795884.1 1 626 evalue:0.0e+00 qcov:100.00 identity:90.70;
kegg_pathway_id 03420;
kegg_pathway_name Nucleotide excision repair;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01541; PF00633; PF12826; PF14520; PF02151; PF08459;
pfam_desc GIY-YIG catalytic domain; Helix-hairpin-helix motif; Helix-hairpin-helix motif; Helix-hairpin-helix domain; UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal;
pfam_id GIY-YIG; HHH; HHH_2; HHH_5; UVR; UvrC_HhH_N;
pfam_target db:Pfam-A.hmm|PF01541.24 evalue:1.3e-10 score:40.6 best_domain_score:38.8 name:GIY-YIG; db:Pfam-A.hmm|PF00633.23 evalue:1.3e-05 score:24.0 best_domain_score:13.6 name:HHH; db:Pfam-A.hmm|PF12826.7 evalue:2e-06 score:27.0 best_domain_score:26.1 name:HHH_2; db:Pfam-A.hmm|PF14520.6 evalue:3.1e-07 score:30.1 best_domain_score:28.3 name:HHH_5; db:Pfam-A.hmm|PF02151.19 evalue:1.2e-09 score:36.8 best_domain_score:35.6 name:UVR; db:Pfam-A.hmm|PF08459.11 evalue:8.1e-52 score:174.5 best_domain_score:173.7 name:UvrC_HhH_N;
sprot_desc UvrABC system protein C;
sprot_id sp|Q3IYX6|UVRC_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IYX6|UVRC_RHOS4 11 624 evalue:4.8e-279 qcov:98.10 identity:78.20;
tigrfam_acc TIGR00194;
tigrfam_desc excinuclease ABC subunit C;
tigrfam_mainrole DNA metabolism;
tigrfam_name uvrC;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00194 evalue:9.8e-168 score:558.5 best_domain_score:558.3 name:TIGR00194;
11904 11134 CDS
ID metaerg.pl|05495
allec_ids 1.-.-.-;
allgo_ids GO:0016491;
allko_ids K00076;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071478977.1 1 254 evalue:5.0e-111 qcov:99.20 identity:81.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-5479; PWY-5987; PWY-5469; PWY-2821; PWY-5826; PWY-5271; PWY-4302;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; sesamin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2.2e-31 score:108.1 best_domain_score:107.6 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:4.4e-34 score:117.3 best_domain_score:117.0 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:4.6e-10 score:38.9 best_domain_score:38.3 name:KR;
sprot_desc Uncharacterized oxidoreductase MT0954;
sprot_id sp|P9WGQ4|Y927C_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WGQ4|Y927C_MYCTO 4 245 evalue:5.3e-19 qcov:94.50 identity:33.30;
12849 11908 CDS
ID metaerg.pl|05496
allgo_ids GO:0016021; GO:0055085; GO:0005886; GO:0015297;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468340.1 1 312 evalue:3.6e-119 qcov:99.70 identity:78.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01699;
pfam_desc Sodium/calcium exchanger protein;
pfam_id Na_Ca_ex;
pfam_target db:Pfam-A.hmm|PF01699.24 evalue:6.1e-56 score:187.8 best_domain_score:100.2 name:Na_Ca_ex;
sprot_desc Putative antiporter CaxA;
sprot_id sp|Q0ZAI3|CAXA_ALKAM;
sprot_target db:uniprot_sprot|sp|Q0ZAI3|CAXA_ALKAM 1 311 evalue:3.0e-40 qcov:99.40 identity:39.10;
tigrfam_acc TIGR00367;
tigrfam_desc K+-dependent Na+/Ca+ exchanger homolog;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00367;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00367 evalue:2.4e-71 score:239.6 best_domain_score:239.3 name:TIGR00367;
tm_num 9;
12849 11908 transmembrane_helix
ID metaerg.pl|05497
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i11920-11988o12016-12075i12109-12177o12220-12321i12409-12468o12511-12579i12616-12684o12712-12765i12769-12837o;
13044 12853 CDS
ID metaerg.pl|05498
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795881.1 1 63 evalue:1.2e-21 qcov:100.00 identity:81.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
sp YES;
tm_num 1;
12853 12909 signal_peptide
ID metaerg.pl|05499
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
13044 12853 transmembrane_helix
ID metaerg.pl|05500
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology o12865-12924i;
13842 13048 CDS
ID metaerg.pl|05501
allgo_ids GO:0006508; GO:0008233; GO:0016021; GO:0005886; GO:0015297; GO:0015081; GO:0006885;
allko_ids K03313;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796072.1 1 264 evalue:3.0e-111 qcov:100.00 identity:77.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01343; PF01972;
pfam_desc Peptidase family S49; Serine dehydrogenase proteinase;
pfam_id Peptidase_S49; SDH_sah;
pfam_target db:Pfam-A.hmm|PF01343.18 evalue:1.2e-31 score:108.9 best_domain_score:108.4 name:Peptidase_S49; db:Pfam-A.hmm|PF01972.16 evalue:3.1e-06 score:25.6 best_domain_score:25.0 name:SDH_sah;
sprot_desc Na(+)/H(+) antiporter NhaA;
sprot_id sp|Q8YFI5|NHAA_BRUME;
sprot_target db:uniprot_sprot|sp|Q8YFI5|NHAA_BRUME 12 264 evalue:7.6e-61 qcov:95.80 identity:48.00;
13958 14854 CDS
ID metaerg.pl|05502
allgo_ids GO:0003700; GO:0006355; GO:0003677;
allko_ids K04761;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795880.1 1 293 evalue:3.3e-138 qcov:98.30 identity:85.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:1.3e-16 score:59.5 best_domain_score:58.4 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:6.8e-33 score:113.0 best_domain_score:112.4 name:LysR_substrate;
sprot_desc Hydrogen peroxide-inducible genes activator;
sprot_id sp|P0ACQ6|OXYR_ECO57;
sprot_target db:uniprot_sprot|sp|P0ACQ6|OXYR_ECO57 5 290 evalue:5.4e-23 qcov:96.00 identity:30.40;
14929 15765 CDS
ID metaerg.pl|05503
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797837.1 1 277 evalue:2.7e-118 qcov:99.60 identity:75.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00753; PF12706; PF13483;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2; Lactamase_B_3;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:4.6e-19 score:68.4 best_domain_score:67.7 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:5.8e-07 score:28.5 best_domain_score:26.9 name:Lactamase_B_2; db:Pfam-A.hmm|PF13483.6 evalue:5.7e-05 score:22.3 best_domain_score:20.1 name:Lactamase_B_3;
16671 15748 CDS
ID metaerg.pl|05504
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0003677;
allko_ids K03566;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius sp003260265;
genomedb_acc GCF_003260265.1;
genomedb_target db:genomedb|GCF_003260265.1|WP_111734550.1 1 293 evalue:2.5e-117 qcov:95.40 identity:71.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:4.3e-20 score:70.7 best_domain_score:69.8 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:1.5e-25 score:89.0 best_domain_score:88.4 name:LysR_substrate;
sprot_desc Glycine cleavage system transcriptional activator;
sprot_id sp|P0A9F8|GCVA_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9F8|GCVA_ECO57 8 296 evalue:4.4e-28 qcov:94.10 identity:30.30;
16829 18421 CDS
ID metaerg.pl|05505
allec_ids 2.1.1.-;
allgo_ids GO:0008168; GO:0015948; GO:0006730;
allko_ids K14083;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria_B;s__Ruegeria_B marina;
genomedb_acc GCF_900101475.1;
genomedb_target db:genomedb|GCF_900101475.1|WP_093035976.1 18 530 evalue:2.4e-253 qcov:96.80 identity:83.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-5479; PWY-5987; PWY-6292; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6146; PWY-6427; PWY-6395; METHIONINE-DEG1-PWY; PWY-5328; PWY-5773; PWY-6519; CO2FORM-PWY; PWY-5116; PWY-1581; PWY-5856; PWY-6142; UBISYN-PWY; PWY-6154; PWY-6424; METH-ACETATE-PWY; PWY-5857; PWY-6303; PWY-5209; PWY-5855; PWY-6151; PWY-1422; PWYG-321; PWY-5305; PWY-6113; PWY-5729; PWY-5975; PWY-5864; PWY-1061; PWY-5876; ALL-CHORISMATE-PWY; PWY-3542; PWY-6153; PWY-5041; PWY-4021; PWY-6575; PWY-6442; CODH-PWY; PWY-6477; PWY-5467;
metacyc_pathway_name 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; xanthohumol biosynthesis;; biotin biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; ubiquinol-9 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; methanogenesis from acetate;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; S-adenosyl-L-methionine cycle I;; vitamin E biosynthesis (tocopherols);; mycolate biosynthesis;; bixin biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; superpathway of chorismate metabolism;; choline biosynthesis II;; autoinducer AI-2 biosynthesis I;; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; gibberellin inactivation II (methylation);; gramine biosynthesis;;
metacyc_pathway_type LIGNAN-SYN;; QUINONE-SYN;; CYSTEINE-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Super-Pathways; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; Fatty-acid-biosynthesis;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Super-Pathways;; Choline-Biosynthesis;; Autoinducer-Biosynthesis;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Autotrophic-CO2-Fixation;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;;
pfam_acc PF06253;
pfam_desc Trimethylamine methyltransferase (MTTB);
pfam_id MTTB;
pfam_target db:Pfam-A.hmm|PF06253.11 evalue:1.8e-211 score:701.7 best_domain_score:701.5 name:MTTB;
sprot_desc Glycine betaine methyltransferase;
sprot_id sp|Q24SP7|MTGB_DESHY;
sprot_target db:uniprot_sprot|sp|Q24SP7|MTGB_DESHY 48 521 evalue:3.0e-93 qcov:89.40 identity:38.10;
18429 20471 CDS
ID metaerg.pl|05506
allec_ids 1.-.-.-;
allgo_ids GO:0071949; GO:0010181; GO:0016491; GO:0019504;
allko_ids K00540; K00219; K00266; K10797; K00486; K00264; K22551;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Marivita;s__Marivita cryptomonadis;
genomedb_acc GCF_002115725.1;
genomedb_target db:genomedb|GCF_002115725.1|WP_085630213.1 1 680 evalue:0.0e+00 qcov:100.00 identity:83.30;
kegg_pathway_id 00360; 00380; 00251; 00910;
kegg_pathway_name Phenylalanine metabolism; Tryptophan metabolism; Glutamate metabolism; Nitrogen metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-2821; PWY-5826; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987;
metacyc_pathway_name glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;;
metacyc_pathway_type GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;;
pfam_acc PF01262; PF00890; PF01494; PF03486; PF13241; PF13450; PF00724; PF00070; PF07992;
pfam_desc Alanine dehydrogenase/PNT, C-terminal domain; FAD binding domain; FAD binding domain; HI0933-like protein; Putative NAD(P)-binding; NAD(P)-binding Rossmann-like domain; NADH:flavin oxidoreductase / NADH oxidase family; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id AlaDh_PNT_C; FAD_binding_2; FAD_binding_3; HI0933_like; NAD_binding_7; NAD_binding_8; Oxidored_FMN; Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01262.21 evalue:1.7e-06 score:26.8 best_domain_score:23.0 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF00890.24 evalue:9e-06 score:24.2 best_domain_score:24.2 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:2.9e-05 score:22.7 best_domain_score:21.1 name:FAD_binding_3; db:Pfam-A.hmm|PF03486.14 evalue:6.3e-09 score:34.2 best_domain_score:29.4 name:HI0933_like; db:Pfam-A.hmm|PF13241.6 evalue:6.4e-05 score:22.6 best_domain_score:16.8 name:NAD_binding_7; db:Pfam-A.hmm|PF13450.6 evalue:5.9e-11 score:41.7 best_domain_score:36.7 name:NAD_binding_8; db:Pfam-A.hmm|PF00724.20 evalue:8.8e-44 score:149.4 best_domain_score:149.0 name:Oxidored_FMN; db:Pfam-A.hmm|PF00070.27 evalue:7.2e-08 score:32.1 best_domain_score:26.1 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.5e-10 score:40.1 best_domain_score:31.5 name:Pyr_redox_2;
sprot_desc Probable N-methylproline demethylase;
sprot_id sp|O87278|STCD_RHIME;
sprot_target db:uniprot_sprot|sp|O87278|STCD_RHIME 1 680 evalue:2.9e-282 qcov:100.00 identity:69.60;
20530 21051 CDS
ID metaerg.pl|05507
allec_ids 3.5.1.88;
allgo_ids GO:0046872; GO:0042586; GO:0006412;
allko_ids K01462;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479382.1 1 173 evalue:8.6e-83 qcov:100.00 identity:84.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01327;
pfam_desc Polypeptide deformylase;
pfam_id Pep_deformylase;
pfam_target db:Pfam-A.hmm|PF01327.21 evalue:1.3e-51 score:173.6 best_domain_score:173.4 name:Pep_deformylase;
sprot_desc Peptide deformylase;
sprot_id sp|Q6NC51|DEF_RHOPA;
sprot_target db:uniprot_sprot|sp|Q6NC51|DEF_RHOPA 1 165 evalue:7.5e-49 qcov:95.40 identity:56.00;
tigrfam_acc TIGR00079;
tigrfam_desc peptide deformylase;
tigrfam_mainrole Protein fate;
tigrfam_name pept_deformyl;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00079 evalue:3.4e-49 score:165.7 best_domain_score:165.5 name:TIGR00079;
21048 21542 CDS
ID metaerg.pl|05508
allec_ids 3.5.1.88;
allgo_ids GO:0046872; GO:0042586; GO:0006412;
allko_ids K01462;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger;s__Salipiger profundus;
genomedb_acc GCF_001969385.1;
genomedb_target db:genomedb|GCF_001969385.1|WP_017468234.1 1 163 evalue:4.5e-73 qcov:99.40 identity:85.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01327;
pfam_desc Polypeptide deformylase;
pfam_id Pep_deformylase;
pfam_target db:Pfam-A.hmm|PF01327.21 evalue:1.4e-35 score:121.5 best_domain_score:121.3 name:Pep_deformylase;
sprot_desc Peptide deformylase;
sprot_id sp|B6JJP8|DEF_OLICO;
sprot_target db:uniprot_sprot|sp|B6JJP8|DEF_OLICO 1 164 evalue:6.0e-32 qcov:100.00 identity:42.80;
tigrfam_acc TIGR00079;
tigrfam_desc peptide deformylase;
tigrfam_mainrole Protein fate;
tigrfam_name pept_deformyl;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00079 evalue:2.7e-36 score:123.7 best_domain_score:123.6 name:TIGR00079;
21543 22445 CDS
ID metaerg.pl|05509
allec_ids 2.1.2.9;
allgo_ids GO:0009058; GO:0016742; GO:0004479;
allko_ids K11787; K01933; K11788; K11175; K00604;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796061.1 1 300 evalue:1.1e-133 qcov:100.00 identity:81.00;
kegg_pathway_id 00230; 00670; 00970; 00271;
kegg_pathway_name Purine metabolism; One carbon pool by folate; Aminoacyl-tRNA biosynthesis; Methionine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF02911; PF00551;
pfam_desc Formyl transferase, C-terminal domain; Formyl transferase;
pfam_id Formyl_trans_C; Formyl_trans_N;
pfam_target db:Pfam-A.hmm|PF02911.18 evalue:2.5e-24 score:84.6 best_domain_score:83.8 name:Formyl_trans_C; db:Pfam-A.hmm|PF00551.19 evalue:2.9e-44 score:150.2 best_domain_score:149.9 name:Formyl_trans_N;
sprot_desc Methionyl-tRNA formyltransferase;
sprot_id sp|Q3IZH6|FMT_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IZH6|FMT_RHOS4 1 290 evalue:1.3e-109 qcov:96.70 identity:70.00;
tigrfam_acc TIGR00460;
tigrfam_desc methionyl-tRNA formyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name fmt;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00460 evalue:9.2e-81 score:270.5 best_domain_score:270.4 name:TIGR00460;
23045 22593 CDS
ID metaerg.pl|05510
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
24562 23201 CDS
ID metaerg.pl|05511
allec_ids 4.2.1.11;
allgo_ids GO:0009986; GO:0005576; GO:0000015; GO:0000287; GO:0004634; GO:0006096;
allko_ids K01689;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468431.1 30 453 evalue:1.3e-226 qcov:93.60 identity:94.80;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-2221; ANARESP1-PWY; GLYCOLYSIS; P122-PWY; PWY-6146; GLYCOLYSIS-E-D; NPGLUCAT-PWY; P124-PWY; GLUCONEO-PWY; P341-PWY; PWY-6142; P461-PWY; PWY-5484; GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAGLYCOLYSIS-PWY; PWY-5464; PWY-1042; PWY-3801; ANAEROFRUCAT-PWY; PWY-5723; P441-PWY; PWY-1622;
metacyc_pathway_name Entner-Doudoroff pathway III (semi-phosphorylative);; ; glycolysis I (from glucose 6-phosphate);; heterolactic fermentation;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of glycolysis and the Entner-Doudoroff pathway;; Entner-Doudoroff pathway II (non-phosphorylative);; Bifidobacterium shunt;; gluconeogenesis I;; glycolysis V (Pyrococcus);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);; homolactic fermentation;; Rubisco shunt;; superpathway of N-acetylneuraminate degradation;; formaldehyde assimilation I (serine pathway);;
metacyc_pathway_type Entner-Duodoroff-Pathways;; ; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Entner-Duodoroff-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Gluconeogenesis;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Fermentation-to-Lactate; Super-Pathways;; Energy-Metabolism;; CARBOXYLATES-DEG; Super-Pathways;; Formaldehyde-Assimilation;;
pfam_acc PF00113; PF03952; PF13378;
pfam_desc Enolase, C-terminal TIM barrel domain; Enolase, N-terminal domain; Enolase C-terminal domain-like;
pfam_id Enolase_C; Enolase_N; MR_MLE_C;
pfam_target db:Pfam-A.hmm|PF00113.22 evalue:3.1e-127 score:423.1 best_domain_score:422.7 name:Enolase_C; db:Pfam-A.hmm|PF03952.16 evalue:3.8e-60 score:201.0 best_domain_score:200.4 name:Enolase_N; db:Pfam-A.hmm|PF13378.6 evalue:1.3e-07 score:30.7 best_domain_score:29.9 name:MR_MLE_C;
sprot_desc Enolase;
sprot_id sp|A8LQL4|ENO_DINSH;
sprot_target db:uniprot_sprot|sp|A8LQL4|ENO_DINSH 30 453 evalue:5.8e-210 qcov:93.60 identity:86.60;
tigrfam_acc TIGR01060;
tigrfam_desc phosphopyruvate hydratase;
tigrfam_mainrole Energy metabolism;
tigrfam_name eno;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01060 evalue:6e-205 score:679.9 best_domain_score:679.7 name:TIGR01060;
25401 24538 CDS
ID metaerg.pl|05512
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468430.1 1 285 evalue:2.3e-120 qcov:99.30 identity:82.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:2.7e-20 score:72.2 best_domain_score:41.2 name:EamA;
tm_num 10;
25401 24538 transmembrane_helix
ID metaerg.pl|05513
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i24556-24624o24637-24696i24757-24825o24835-24888i24907-24966o24979-25032i25069-25128o25156-25224i25258-25311o25324-25380i;
26307 25510 CDS
ID metaerg.pl|05514
allgo_ids GO:0009055; GO:0020037; GO:0016021; GO:0005886; GO:0070469; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479734.1 1 265 evalue:3.7e-141 qcov:100.00 identity:92.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF02167;
pfam_desc Cytochrome C1 family;
pfam_id Cytochrom_C1;
pfam_target db:Pfam-A.hmm|PF02167.15 evalue:2.2e-64 score:216.4 best_domain_score:215.8 name:Cytochrom_C1;
sp YES;
sprot_desc Cytochrome c1;
sprot_id sp|P13627|CY1_PARDE;
sprot_target db:uniprot_sprot|sp|P13627|CY1_PARDE 32 265 evalue:1.4e-78 qcov:88.30 identity:60.20;
tm_num 1;
25510 25584 signal_peptide
ID metaerg.pl|05515
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
26307 25510 transmembrane_helix
ID metaerg.pl|05516
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology o26203-26262i;
27686 26331 CDS
ID metaerg.pl|05517
allgo_ids GO:0009055; GO:0016020; GO:0016491; GO:0016021; GO:0005886; GO:0045275; GO:0046872; GO:0008121; GO:0006122;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479733.1 1 451 evalue:1.8e-249 qcov:100.00 identity:92.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00033; PF00032; PF13631;
pfam_desc Cytochrome b/b6/petB; Cytochrome b(C-terminal)/b6/petD; Cytochrome b(N-terminal)/b6/petB;
pfam_id Cytochrome_B; Cytochrom_B_C; Cytochrom_B_N_2;
pfam_target db:Pfam-A.hmm|PF00033.19 evalue:1.3e-67 score:226.5 best_domain_score:226.5 name:Cytochrome_B; db:Pfam-A.hmm|PF00032.17 evalue:1.8e-37 score:127.0 best_domain_score:127.0 name:Cytochrom_B_C; db:Pfam-A.hmm|PF13631.6 evalue:2.2e-45 score:153.9 best_domain_score:148.1 name:Cytochrom_B_N_2;
sprot_desc Cytochrome b;
sprot_id sp|P05418|CYB_PARDE;
sprot_target db:uniprot_sprot|sp|P05418|CYB_PARDE 1 430 evalue:1.2e-210 qcov:95.30 identity:78.80;
tm_num 10;
27686 26331 transmembrane_helix
ID metaerg.pl|05518
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i26457-26525o26613-26672i26709-26777o26805-26873i26910-26978o27087-27155i27216-27284o27297-27365i27423-27476o27504-27572i;
28318 27701 CDS
ID metaerg.pl|05519
allec_ids 7.1.1.8; 1.10.2.2;
allgo_ids GO:0016491; GO:0051537; GO:0055114; GO:0016021; GO:0005886; GO:0046872; GO:0008121;
allko_ids K02636;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072247781.1 19 205 evalue:5.1e-98 qcov:91.20 identity:91.40;
kegg_pathway_id 00195;
kegg_pathway_name Photosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00355; PF10399;
pfam_desc Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal;
pfam_id Rieske; UCR_Fe-S_N;
pfam_target db:Pfam-A.hmm|PF00355.26 evalue:1.3e-12 score:46.7 best_domain_score:45.4 name:Rieske; db:Pfam-A.hmm|PF10399.9 evalue:5.6e-20 score:69.7 best_domain_score:69.0 name:UCR_Fe-S_N;
sp YES;
sprot_desc Ubiquinol-cytochrome c reductase iron-sulfur subunit;
sprot_id sp|P05417|UCRI_PARDE;
sprot_target db:uniprot_sprot|sp|P05417|UCRI_PARDE 21 205 evalue:3.1e-78 qcov:90.20 identity:73.00;
tigrfam_acc TIGR01409; TIGR01416;
tigrfam_desc Tat (twin-arginine translocation) pathway signal sequence; ubiquinol-cytochrome c reductase, iron-sulfur subunit;
tigrfam_mainrole Protein fate; Energy metabolism;
tigrfam_name TAT_signal_seq; Rieske_proteo;
tigrfam_sub1role Protein and peptide secretion and trafficking; Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01409 evalue:1.2e-05 score:24.6 best_domain_score:23.4 name:TIGR01409; db:TIGRFAMs.hmm|TIGR01416 evalue:2.5e-61 score:205.9 best_domain_score:205.7 name:TIGR01416;
tm_num 1;
27701 27892 signal_peptide
ID metaerg.pl|05520
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
28318 27701 transmembrane_helix
ID metaerg.pl|05521
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i27794-27862o;
29092 28469 CDS
ID metaerg.pl|05522
allgo_ids GO:0005515;
allko_ids K00799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797682.1 1 205 evalue:1.4e-87 qcov:99.00 identity:77.10;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF02798; PF13409; PF13417;
pfam_desc Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_N; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF02798.20 evalue:1.6e-06 score:27.6 best_domain_score:25.6 name:GST_N; db:Pfam-A.hmm|PF13409.6 evalue:3.4e-12 score:45.7 best_domain_score:44.9 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:1.2e-15 score:56.9 best_domain_score:55.8 name:GST_N_3;
tm_num 1;
29092 28469 transmembrane_helix
ID metaerg.pl|05523
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology o28910-28978i;
29373 29089 CDS
ID metaerg.pl|05524
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797683.1 1 94 evalue:6.2e-35 qcov:100.00 identity:81.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
tm_num 1;
29373 29089 transmembrane_helix
ID metaerg.pl|05525
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology o29098-29166i;
30850 29462 CDS
ID metaerg.pl|05526
allec_ids 2.7.13.3;
allgo_ids GO:0000155; GO:0007165; GO:0016021; GO:0005886; GO:0005524;
allko_ids K11640; K02484; K07642; K11711; K07643; K07704; K07677; K07708; K07645; K07652; K07639; K08475; K07646; K07641; K03407; K00936; K07649; K07654; K07651; K07711; K11633; K07768; K07644; K07709; K10681; K07675; K13040; K10942; K07647; K10125; K11629; K04757; K07769; K02486; K01768; K07656; K07640; K07710; K03388; K02668; K07636; K07653; K07638; K02480; K02482;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797684.1 1 458 evalue:2.8e-197 qcov:99.10 identity:79.00;
kegg_pathway_id 00790; 05111; 00230; 02020; 03090;
kegg_pathway_name Folate biosynthesis; Vibrio cholerae pathogenic cycle; Purine metabolism; Two-component system - General; Type II secretion system;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF02518; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.2e-12 score:47.5 best_domain_score:46.7 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:7.6e-07 score:28.3 best_domain_score:27.2 name:HisKA;
sprot_desc Sensor histidine kinase RegB;
sprot_id sp|P0C0Z0|REGB_RHOSH;
sprot_target db:uniprot_sprot|sp|P0C0Z0|REGB_RHOSH 7 458 evalue:2.2e-132 qcov:97.80 identity:55.00;
tm_num 5;
30850 29462 transmembrane_helix
ID metaerg.pl|05527
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i29531-29599o29612-29680i29714-29782o29840-29908i29927-29995o;
30941 31603 CDS
ID metaerg.pl|05528
allgo_ids GO:0005623; GO:0046872; GO:0045454; GO:0015979;
allko_ids K07152;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797764.1 15 220 evalue:1.7e-96 qcov:93.60 identity:82.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF02630;
pfam_desc SCO1/SenC;
pfam_id SCO1-SenC;
pfam_target db:Pfam-A.hmm|PF02630.14 evalue:6.4e-44 score:148.3 best_domain_score:147.9 name:SCO1-SenC;
sprot_desc hypothetical protein;
sprot_id sp|Q52720|SENC_RHOCB;
sprot_target db:uniprot_sprot|sp|Q52720|SENC_RHOCB 47 217 evalue:4.0e-47 qcov:77.70 identity:53.50;
tm_num 1;
30941 31603 transmembrane_helix
ID metaerg.pl|05529
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i30998-31066o;
31669 32232 CDS
ID metaerg.pl|05530
allgo_ids GO:0043565; GO:0003677; GO:0000160;
allko_ids K11231; K02491; K07677; K07708; K08282; K02484; K00760; K11640; K11356; K11711; K07642; K07648; K07718; K07651; K02575; K07768; K11354; K07778; K07673; K01120; K07639; K08475; K07646; K07641; K07652; K07682; K07654; K03407; K07647; K07717; K07675; K13761; K02486; K12767; K11357; K10125; K04757; K07709; K07644; K07676; K10681; K06379; K11527; K07678; K10715; K02480; K02482; K07636; K07653; K07716; K02489; K01768; K07710; K03388; K02668; K08479; K15012;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797685.1 1 187 evalue:3.9e-81 qcov:100.00 identity:87.70;
kegg_pathway_id 00230; 00790; 00983; 03090; 02020; 04011;
kegg_pathway_name Purine metabolism; Folate biosynthesis; Drug metabolism - other enzymes; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF02954; PF00072;
pfam_desc Bacterial regulatory protein, Fis family; Response regulator receiver domain;
pfam_id HTH_8; Response_reg;
pfam_target db:Pfam-A.hmm|PF02954.19 evalue:5.7e-05 score:22.1 best_domain_score:20.9 name:HTH_8; db:Pfam-A.hmm|PF00072.24 evalue:5.6e-21 score:74.0 best_domain_score:73.6 name:Response_reg;
sprot_desc Photosynthetic apparatus regulatory protein RegA;
sprot_id sp|Q53228|REGA_RHOS4;
sprot_target db:uniprot_sprot|sp|Q53228|REGA_RHOS4 10 187 evalue:3.6e-73 qcov:95.20 identity:82.00;
33166 32666 CDS
ID metaerg.pl|05531
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386194.1 8 157 evalue:1.2e-60 qcov:90.40 identity:81.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01047; PF12802;
pfam_desc MarR family; MarR family;
pfam_id MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF01047.22 evalue:9.2e-10 score:37.6 best_domain_score:36.8 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:4e-11 score:41.9 best_domain_score:40.9 name:MarR_2;
tigrfam_acc TIGR02337;
tigrfam_desc homoprotocatechuate degradation operon regulator, HpaR;
tigrfam_name HpaR;
tigrfam_target db:TIGRFAMs.hmm|TIGR02337 evalue:7.1e-39 score:131.8 best_domain_score:131.5 name:TIGR02337;
33394 33651 CDS
ID metaerg.pl|05532
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797865.1 1 85 evalue:3.0e-36 qcov:100.00 identity:97.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF10073;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2312);
pfam_id DUF2312;
pfam_target db:Pfam-A.hmm|PF10073.9 evalue:2.4e-33 score:112.8 best_domain_score:112.6 name:DUF2312;
sprot_desc hypothetical protein;
sprot_id sp|Q1MBX8|Y4065_RHIL3;
sprot_target db:uniprot_sprot|sp|Q1MBX8|Y4065_RHIL3 7 84 evalue:3.7e-17 qcov:91.80 identity:57.70;
35281 34049 CDS
ID metaerg.pl|05533
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795664.1 18 410 evalue:9.2e-91 qcov:95.90 identity:46.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF03724;
pfam_desc META domain;
pfam_id META;
pfam_target db:Pfam-A.hmm|PF03724.16 evalue:6.1e-17 score:60.8 best_domain_score:59.4 name:META;
sp YES;
34049 34108 signal_peptide
ID metaerg.pl|05534
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
35918 35355 CDS
ID metaerg.pl|05535
allgo_ids GO:0003746; GO:0006414; GO:0005737;
allko_ids K02356;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469851.1 1 187 evalue:3.2e-99 qcov:100.00 identity:97.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01132; PF08207; PF09285;
pfam_desc Elongation factor P (EF-P) OB domain; Elongation factor P (EF-P) KOW-like domain; Elongation factor P, C-terminal;
pfam_id EFP; EFP_N; Elong-fact-P_C;
pfam_target db:Pfam-A.hmm|PF01132.20 evalue:2.8e-18 score:64.9 best_domain_score:64.9 name:EFP; db:Pfam-A.hmm|PF08207.12 evalue:1.3e-24 score:85.3 best_domain_score:84.3 name:EFP_N; db:Pfam-A.hmm|PF09285.11 evalue:2.3e-21 score:74.5 best_domain_score:73.4 name:Elong-fact-P_C;
sprot_desc Elongation factor P;
sprot_id sp|Q28M91|EFP_JANSC;
sprot_target db:uniprot_sprot|sp|Q28M91|EFP_JANSC 1 187 evalue:8.0e-89 qcov:100.00 identity:84.00;
tigrfam_acc TIGR00038;
tigrfam_desc translation elongation factor P;
tigrfam_mainrole Protein synthesis;
tigrfam_name efp;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00038 evalue:7.7e-69 score:230.2 best_domain_score:230.0 name:TIGR00038;
36128 36451 CDS
ID metaerg.pl|05536
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796032.1 1 107 evalue:7.3e-48 qcov:100.00 identity:98.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
37111 36515 CDS
ID metaerg.pl|05537
allgo_ids GO:0015035;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795662.1 1 196 evalue:1.2e-96 qcov:99.00 identity:87.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01323;
pfam_desc DSBA-like thioredoxin domain;
pfam_id DSBA;
pfam_target db:Pfam-A.hmm|PF01323.20 evalue:3.9e-24 score:84.7 best_domain_score:84.6 name:DSBA;
37202 38218 CDS
ID metaerg.pl|05538
allec_ids 2.7.6.1;
allgo_ids GO:0009116; GO:0005737; GO:0005524; GO:0016301; GO:0000287; GO:0004749; GO:0006015; GO:0009165; GO:0009156;
allko_ids K00762; K00948;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469854.1 1 336 evalue:3.8e-175 qcov:99.40 identity:95.20;
kegg_pathway_id 00230; 00240; 00030; 00983;
kegg_pathway_name Purine metabolism; Pyrimidine metabolism; Pentose phosphate pathway; Drug metabolism - other enzymes;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PRPP-PWY; PWY-6404; PWY0-662;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; PRPP biosynthesis;;
metacyc_pathway_type Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; Sugar-Phosphate-Biosynthesis;;
pfam_acc PF00156; PF13793; PF14572;
pfam_desc Phosphoribosyl transferase domain; N-terminal domain of ribose phosphate pyrophosphokinase; Phosphoribosyl synthetase-associated domain;
pfam_id Pribosyltran; Pribosyltran_N; Pribosyl_synth;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:9.2e-20 score:70.0 best_domain_score:68.6 name:Pribosyltran; db:Pfam-A.hmm|PF13793.6 evalue:7.4e-48 score:160.5 best_domain_score:149.0 name:Pribosyltran_N; db:Pfam-A.hmm|PF14572.6 evalue:6.9e-21 score:74.3 best_domain_score:71.7 name:Pribosyl_synth;
sprot_desc Ribose-phosphate pyrophosphokinase;
sprot_id sp|B9KPJ0|KPRS_RHOSK;
sprot_target db:uniprot_sprot|sp|B9KPJ0|KPRS_RHOSK 5 336 evalue:2.6e-154 qcov:98.20 identity:82.20;
tigrfam_acc TIGR01251;
tigrfam_desc ribose-phosphate diphosphokinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name ribP_PPkin;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01251 evalue:2.1e-108 score:361.1 best_domain_score:360.9 name:TIGR01251;
38555 38229 CDS
ID metaerg.pl|05539
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795660.1 1 107 evalue:5.9e-29 qcov:99.10 identity:64.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
tm_num 2;
38555 38229 transmembrane_helix
ID metaerg.pl|05540
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i38265-38333o38376-38444i;
39413 38559 CDS
ID metaerg.pl|05541
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469856.1 1 284 evalue:8.5e-136 qcov:100.00 identity:95.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01145;
pfam_desc SPFH domain / Band 7 family;
pfam_id Band_7;
pfam_target db:Pfam-A.hmm|PF01145.25 evalue:1.4e-28 score:99.4 best_domain_score:99.4 name:Band_7;
sp YES;
tm_num 1;
38559 38633 signal_peptide
ID metaerg.pl|05542
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
39413 38559 transmembrane_helix
ID metaerg.pl|05543
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i38565-38633o;
40684 39455 CDS
ID metaerg.pl|05544
allgo_ids GO:0016021; GO:0055085; GO:0005887; GO:0042910; GO:0006855;
allko_ids K08169; K07552; K08219; K08217;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795658.1 1 407 evalue:2.6e-186 qcov:99.50 identity:83.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF07690; PF13347; PF00083; PF06609;
pfam_desc Major Facilitator Superfamily; MFS/sugar transport protein; Sugar (and other) transporter; Fungal trichothecene efflux pump (TRI12);
pfam_id MFS_1; MFS_2; Sugar_tr; TRI12;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:5.4e-35 score:120.2 best_domain_score:120.2 name:MFS_1; db:Pfam-A.hmm|PF13347.6 evalue:4.4e-07 score:28.0 best_domain_score:26.7 name:MFS_2; db:Pfam-A.hmm|PF00083.24 evalue:1.5e-08 score:33.1 best_domain_score:33.1 name:Sugar_tr; db:Pfam-A.hmm|PF06609.13 evalue:7.9e-10 score:37.0 best_domain_score:37.0 name:TRI12;
sprot_desc Uncharacterized MFS-type transporter YdgK;
sprot_id sp|P96709|YDGK_BACSU;
sprot_target db:uniprot_sprot|sp|P96709|YDGK_BACSU 19 391 evalue:4.2e-26 qcov:91.20 identity:26.60;
tigrfam_acc TIGR00710;
tigrfam_desc drug resistance transporter, Bcr/CflA subfamily;
tigrfam_name efflux_Bcr_CflA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00710 evalue:2e-62 score:210.9 best_domain_score:210.5 name:TIGR00710;
tm_num 12;
40684 39455 transmembrane_helix
ID metaerg.pl|05545
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i39491-39559o39617-39679i39698-39766o39776-39829i39884-39952o39965-40021i40100-40168o40211-40279i40316-40384o40397-40465i40502-40570o40598-40666i;
41316 40681 CDS
ID metaerg.pl|05546
allgo_ids GO:0015035;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795657.1 1 210 evalue:4.3e-92 qcov:99.50 identity:78.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01323; PF13462;
pfam_desc DSBA-like thioredoxin domain; Thioredoxin;
pfam_id DSBA; Thioredoxin_4;
pfam_target db:Pfam-A.hmm|PF01323.20 evalue:3.6e-41 score:140.3 best_domain_score:139.9 name:DSBA; db:Pfam-A.hmm|PF13462.6 evalue:8e-06 score:25.3 best_domain_score:23.7 name:Thioredoxin_4;
42905 41313 CDS
ID metaerg.pl|05547
allec_ids 6.2.1.2;
allgo_ids GO:0003824; GO:0005759; GO:0003996; GO:0005524; GO:0047760; GO:0015645; GO:0004321; GO:0046872; GO:0006637; GO:0006633;
allko_ids K01652; K01897; K01904; K01909; K01895; K05939; K01586; K01779; K02364; K00992; K03367; K00143; K01776; K01896;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795656.1 38 527 evalue:1.5e-223 qcov:92.50 identity:79.40;
kegg_pathway_id 00720; 00940; 00620; 00640; 00650; 00300; 00564; 00310; 00010; 00290; 00770; 01053; 00473; 00251; 00252; 00660; 00471; 00071;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis; Pyruvate metabolism; Propanoate metabolism; Butanoate metabolism; Lysine biosynthesis; Glycerophospholipid metabolism; Lysine degradation; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; D-Alanine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:4.8e-62 score:209.1 best_domain_score:208.7 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:4.7e-10 score:39.6 best_domain_score:38.5 name:AMP-binding_C;
sprot_desc Acyl-coenzyme A synthetase ACSM5, mitochondrial;
sprot_id sp|Q8BGA8|ACSM5_MOUSE;
sprot_target db:uniprot_sprot|sp|Q8BGA8|ACSM5_MOUSE 40 523 evalue:1.4e-34 qcov:91.30 identity:27.90;
42941 45097 CDS
ID metaerg.pl|05548
allec_ids 2.7.9.3;
allgo_ids GO:0016491; GO:0055114;
allko_ids K01008; K00356; K03885;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCA08;s__HLUCCA08 sp003129565;
genomedb_acc GCF_003129565.1;
genomedb_target db:genomedb|GCF_003129565.1|WP_109385335.1 1 717 evalue:1.4e-272 qcov:99.90 identity:68.90;
kegg_pathway_id 00190; 00450;
kegg_pathway_name Oxidative phosphorylation; Selenoamino acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-6281; PWY0-901;
metacyc_pathway_name L-selenocysteine biosynthesis II (archaea and eukaryotes);; L-selenocysteine biosynthesis I (bacteria);;
metacyc_pathway_type Selenocysteine-Biosynthesis;; Selenocysteine-Biosynthesis;;
pfam_acc PF00586; PF02769; PF00070; PF07992;
pfam_desc AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id AIRS; AIRS_C; Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF00586.24 evalue:5.1e-14 score:51.9 best_domain_score:51.9 name:AIRS; db:Pfam-A.hmm|PF02769.22 evalue:2.1e-27 score:95.4 best_domain_score:93.6 name:AIRS_C; db:Pfam-A.hmm|PF00070.27 evalue:5.7e-05 score:22.8 best_domain_score:21.7 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:5.6e-26 score:90.7 best_domain_score:89.4 name:Pyr_redox_2;
tigrfam_acc TIGR00476; TIGR03169;
tigrfam_desc selenide, water dikinase; pyridine nucleotide-disulfide oxidoreductase family protein;
tigrfam_name selD; Nterm_to_SelD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00476 evalue:1.7e-86 score:289.4 best_domain_score:288.7 name:TIGR00476; db:TIGRFAMs.hmm|TIGR03169 evalue:1.4e-143 score:477.8 best_domain_score:477.0 name:TIGR03169;
46136 45081 CDS
ID metaerg.pl|05549
allec_ids 2.5.1.-; 2.9.1.-;
allgo_ids GO:0016765; GO:0043828; GO:0070329; GO:0002098;
allko_ids K06917;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCA08;s__HLUCCA08 sp003129565;
genomedb_acc GCF_003129565.1;
genomedb_target db:genomedb|GCF_003129565.1|WP_109385337.1 1 348 evalue:8.0e-136 qcov:99.10 identity:71.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-5898; PWY-5863; PWY-5816; PWY-5862; PWY-5845; PWY-5896; PWY-2681; PWY-5068; PWY-5701; PWY-5140; PWY-5135; PWY-6404; PWY-5806; PWY-6262; PWY-724; PWY-5861; PWY-5783; PWY-5805; POLYISOPRENSYN-PWY; PWY-5808; PWY-5897; PWY-5132; PWY-6263; PWY-5864; PWY-5133; PWY-6129; PWY-6383; PWY-5893; PWY-5027; PWY-5064; PWY-4502; PWY-5838; PWY-5899; PWY-6520; PWY-5134; PWY-5817; PWY-6403;
metacyc_pathway_name superpathway of menaquinol-12 biosynthesis;; superpathway of phylloquinol biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; trans-zeatin biosynthesis;; chlorophyll cycle;; shikonin biosynthesis;; cannabinoid biosynthesis;; xanthohumol biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; demethylmenaquinol-8 biosynthesis II;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; octaprenyl diphosphate biosynthesis;; nonaprenyl diphosphate biosynthesis I;; polyisoprenoid biosynthesis (E. coli);; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; lupulone and humulone biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; superpathway of plastoquinol biosynthesis;; colupulone and cohumulone biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; tridecaprenyl diphosphate biosynthesis;; phylloquinol biosynthesis;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; nonaprenyl diphosphate biosynthesis II;; superpathway of bitter acids biosynthesis;; dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; CYTOKININ-BIOSYNTHESIS;; Chlorophyll-a-Biosynthesis;; QUINONE-SYN;; TERPENOPHENOLICS-SYN;; PRENYLFLAVONOID-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Demethylmenaquinol-8-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Plastoquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Lipid-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;;
pfam_acc PF00581;
pfam_desc Rhodanese-like domain;
pfam_id Rhodanese;
pfam_target db:Pfam-A.hmm|PF00581.20 evalue:1.1e-10 score:41.2 best_domain_score:39.4 name:Rhodanese;
sprot_desc tRNA 2-selenouridine synthase;
sprot_id sp|Q2SQB9|SELU_HAHCH;
sprot_target db:uniprot_sprot|sp|Q2SQB9|SELU_HAHCH 19 312 evalue:3.7e-31 qcov:83.80 identity:32.80;
tigrfam_acc TIGR03167;
tigrfam_desc tRNA 2-selenouridine synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name tRNA_sel_U_synt;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03167 evalue:2.9e-105 score:351.3 best_domain_score:351.1 name:TIGR03167;
48578 46215 CDS
ID metaerg.pl|05550
allko_ids K09822;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius nitratireducens;
genomedb_acc GCF_002925845.1;
genomedb_target db:genomedb|GCF_002925845.1|WP_104020007.1 1 785 evalue:0.0e+00 qcov:99.70 identity:73.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF10070;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2309);
pfam_id DUF2309;
pfam_target db:Pfam-A.hmm|PF10070.9 evalue:9.8e-235 score:780.6 best_domain_score:779.9 name:DUF2309;
sprot_desc hypothetical protein;
sprot_id sp|B9JZ98|Y319_AGRVS;
sprot_target db:uniprot_sprot|sp|B9JZ98|Y319_AGRVS 18 782 evalue:2.7e-247 qcov:97.20 identity:59.90;
50154 48601 CDS
ID metaerg.pl|05551
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019956120.1 1 514 evalue:1.3e-187 qcov:99.40 identity:71.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00361; PF00662;
pfam_desc Proton-conducting membrane transporter; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus;
pfam_id Proton_antipo_M; Proton_antipo_N;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:1e-35 score:122.6 best_domain_score:122.6 name:Proton_antipo_M; db:Pfam-A.hmm|PF00662.20 evalue:2.3e-08 score:33.2 best_domain_score:30.8 name:Proton_antipo_N;
tm_num 13;
50154 48601 transmembrane_helix
ID metaerg.pl|05552
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology o48613-48666i48703-48771o48808-48876i48955-49023o49111-49179i49216-49284o49312-49380i49393-49461o49504-49572i49693-49752o49762-49830i49864-49932o49975-50043i;
50258 51136 CDS
ID metaerg.pl|05553
allgo_ids GO:0003700; GO:0006355; GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius nitratireducens;
genomedb_acc GCF_002925845.1;
genomedb_target db:genomedb|GCF_002925845.1|WP_104020005.1 2 289 evalue:8.7e-120 qcov:98.60 identity:80.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:1.6e-22 score:78.5 best_domain_score:76.9 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:8.6e-23 score:80.0 best_domain_score:79.2 name:LysR_substrate;
sprot_desc RuBisCO operon transcriptional regulator;
sprot_id sp|P25544|RBCR_ALLVI;
sprot_target db:uniprot_sprot|sp|P25544|RBCR_ALLVI 1 256 evalue:1.1e-15 qcov:87.70 identity:27.90;
51245 52744 CDS
ID metaerg.pl|05554
allec_ids 1.2.1.-; 1.2.1.27;
allgo_ids GO:0016491; GO:0055114; GO:0018478; GO:0004491; GO:0019483; GO:0006210; GO:0006574; GO:0006573;
allko_ids K00140; K13821; K00294; K00128;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794928.1 1 499 evalue:6.6e-277 qcov:100.00 identity:93.40;
kegg_pathway_id 00561; 00620; 00330; 00220; 00903; 00650; 00640; 00641; 00120; 00380; 00251; 00071; 00631; 00410; 00340; 00010; 00310; 00280;
kegg_pathway_name Glycerolipid metabolism; Pyruvate metabolism; Arginine and proline metabolism; Urea cycle and metabolism of amino groups; Limonene and pinene degradation; Butanoate metabolism; Propanoate metabolism; 3-Chloroacrylic acid degradation; Bile acid biosynthesis; Tryptophan metabolism; Glutamate metabolism; Fatty acid metabolism; 1,2-Dichloroethane degradation; beta-Alanine metabolism; Histidine metabolism; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-5305; P105-PWY; P41-PWY; PWY-6537; PWY-321; 4TOLCARBDEG-PWY; PWY-5642; ANARESP1-PWY; PWY-5195; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; PWY-5482; PWY-5537; TOLSULFDEG-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; VALDEG-PWY;
metacyc_pathway_name bixin biosynthesis;; TCA cycle IV (2-oxoglutarate decarboxylase);; pyruvate fermentation to acetate and (S)-lactate I;; 4-aminobutanoate degradation II;; cutin biosynthesis;; 4-toluenecarboxylate degradation;; 2,4-dinitrotoluene degradation;; ; artemisinin and arteannuin B biosynthesis;; 4-hydroxyphenylacetate degradation;; pyruvate fermentation to acetate II;; pyruvate fermentation to acetate V;; 4-toluenesulfonate degradation I;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; L-valine degradation I;;
metacyc_pathway_type APOCAROTENOID-SYN;; TCA-VARIANTS;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; 4-Aminobutyraye-Degradation;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Dinitrotoluene-Degradation;; ; SESQUITERPENE-LACTONE;; AROMATIC-COMPOUNDS-DEGRADATION;; Pyruvate-Acetate-Fermentation;; Pyruvate-Acetate-Fermentation; Super-Pathways;; 4-Toluenesulfonate-Degradation;; Energy-Metabolism; Super-Pathways;; VALINE-DEG;;
pfam_acc PF00171; PF05893;
pfam_desc Aldehyde dehydrogenase family; Acyl-CoA reductase (LuxC);
pfam_id Aldedh; LuxC;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:1.5e-139 score:464.8 best_domain_score:464.6 name:Aldedh; db:Pfam-A.hmm|PF05893.14 evalue:0.0001 score:20.8 best_domain_score:20.3 name:LuxC;
sprot_desc Putative 3-oxopropanoate dehydrogenase;
sprot_id sp|Q9I702|BAUC_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I702|BAUC_PSEAE 1 498 evalue:5.5e-161 qcov:99.80 identity:55.70;
tigrfam_acc TIGR01722;
tigrfam_desc methylmalonate-semialdehyde dehydrogenase (acylating);
tigrfam_mainrole Energy metabolism;
tigrfam_name MMSDH;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01722 evalue:5.5e-191 score:634.5 best_domain_score:634.3 name:TIGR01722;
52882 54027 CDS
ID metaerg.pl|05555
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005739; GO:0003995; GO:0050660; GO:0006629; GO:0006574;
allko_ids K14448; K06446; K00253; K11410; K00248; K09478; K00120; K00232; K00252; K11731; K11538; K08098; K00249;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794925.1 1 380 evalue:3.0e-197 qcov:99.70 identity:90.80;
kegg_pathway_id 00380; 00632; 00361; 00592; 00650; 00640; 00903; 01040; 00930; 00626; 01031; 00280; 00624; 00310; 00410; 00071;
kegg_pathway_name Tryptophan metabolism; Benzoate degradation via CoA ligation; gamma-Hexachlorocyclohexane degradation; alpha-Linolenic acid metabolism; Butanoate metabolism; Propanoate metabolism; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; Caprolactam degradation; Naphthalene and anthracene degradation; Glycan structures - biosynthesis 2; Valine, leucine and isoleucine degradation; 1- and 2-Methylnaphthalene degradation; Lysine degradation; beta-Alanine metabolism; Fatty acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id CARNMET-PWY; PWY-2582; PWY-699; PWY-6544;
metacyc_pathway_name L-carnitine degradation I;; brassinosteroid biosynthesis II;; brassinosteroid biosynthesis I;; superpathway of C28 brassinosteroid biosynthesis;;
metacyc_pathway_type CARN-DEG;; Brassinosteroid-Biosynthesis;; Brassinosteroid-Biosynthesis;; Super-Pathways;;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:1.8e-49 score:167.0 best_domain_score:167.0 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:4.4e-20 score:71.6 best_domain_score:70.9 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:2.9e-25 score:87.5 best_domain_score:86.5 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:1.1e-27 score:96.2 best_domain_score:95.2 name:Acyl-CoA_dh_N;
sprot_desc Isobutyryl-CoA dehydrogenase, mitochondrial;
sprot_id sp|Q54IM8|ACAD8_DICDI;
sprot_target db:uniprot_sprot|sp|Q54IM8|ACAD8_DICDI 5 376 evalue:7.5e-110 qcov:97.60 identity:53.60;
54024 55073 CDS
ID metaerg.pl|05556
allec_ids 3.1.2.4;
allgo_ids GO:0003824; GO:0005763; GO:0005739; GO:0003860; GO:0003735; GO:0009083; GO:0006635; GO:0032543;
allko_ids K01825; K10527; K07515; K07514; K15016; K01692; K00022; K01782; K07516; K05605;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470261.1 1 346 evalue:1.7e-133 qcov:99.10 identity:72.00;
kegg_pathway_id 00380; 00930; 00632; 00280; 00281; 00310; 00592; 00410; 00071; 00640; 00650; 00062; 00903; 01040;
kegg_pathway_name Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Propanoate metabolism; Butanoate metabolism; Fatty acid elongation in mitochondria; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id VALDEG-PWY; PWY-3941; PWY-4221;
metacyc_pathway_name L-valine degradation I;; β-alanine biosynthesis II;; superpathway of coenzyme A biosynthesis II (plants);;
metacyc_pathway_type VALINE-DEG;; Beta-Alanine-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:1.9e-30 score:105.2 best_domain_score:104.1 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:3.1e-106 score:354.9 best_domain_score:354.7 name:ECH_2;
sprot_desc 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial;
sprot_id sp|P28817|HIBCH_YEAST;
sprot_target db:uniprot_sprot|sp|P28817|HIBCH_YEAST 15 312 evalue:9.8e-24 qcov:85.40 identity:28.70;
55070 55942 CDS
ID metaerg.pl|05557
allec_ids 1.1.1.31;
allgo_ids GO:0051287; GO:0008442; GO:0050661; GO:0006574;
allko_ids K00020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794923.1 1 289 evalue:1.6e-134 qcov:99.70 identity:86.50;
kegg_pathway_id 00280;
kegg_pathway_name Valine, leucine and isoleucine degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id VALDEG-PWY;
metacyc_pathway_name L-valine degradation I;;
metacyc_pathway_type VALINE-DEG;;
pfam_acc PF03807; PF14833; PF03446; PF03721;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase; NAD binding domain of 6-phosphogluconate dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain;
pfam_id F420_oxidored; NAD_binding_11; NAD_binding_2; UDPG_MGDP_dh_N;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:1.5e-05 score:24.7 best_domain_score:22.1 name:F420_oxidored; db:Pfam-A.hmm|PF14833.6 evalue:1.8e-40 score:137.2 best_domain_score:136.2 name:NAD_binding_11; db:Pfam-A.hmm|PF03446.15 evalue:8.7e-46 score:155.2 best_domain_score:154.5 name:NAD_binding_2; db:Pfam-A.hmm|PF03721.14 evalue:9.8e-06 score:24.5 best_domain_score:19.8 name:UDPG_MGDP_dh_N;
sprot_desc Probable 3-hydroxyisobutyrate dehydrogenase;
sprot_id sp|P63936|MMSB_MYCBO;
sprot_target db:uniprot_sprot|sp|P63936|MMSB_MYCBO 3 287 evalue:3.1e-63 qcov:98.30 identity:46.40;
tigrfam_acc TIGR01692;
tigrfam_desc 3-hydroxyisobutyrate dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name HIBADH;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01692 evalue:6.9e-109 score:362.8 best_domain_score:362.6 name:TIGR01692;
57021 56119 CDS
ID metaerg.pl|05558
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ponticoccus;s__Ponticoccus marisrubri;
genomedb_acc GCF_001482405.1;
genomedb_target db:genomedb|GCF_001482405.1|WP_084794309.1 1 300 evalue:5.3e-112 qcov:100.00 identity:73.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:5.7e-17 score:60.7 best_domain_score:60.7 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:2.9e-25 score:88.1 best_domain_score:87.1 name:LysR_substrate;
57241 57597 CDS
ID metaerg.pl|05559
allec_ids 3.5.4.1;
allgo_ids GO:0002100; GO:0008251; GO:0005829; GO:0005634; GO:0052718; GO:0102480; GO:0004131; GO:0052717; GO:0008270; GO:0019858; GO:0044206;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ponticoccus;s__Ponticoccus marisrubri;
genomedb_acc GCF_001482405.1;
genomedb_target db:genomedb|GCF_001482405.1|WP_058861094.1 4 118 evalue:2.2e-45 qcov:97.50 identity:73.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY0-163;
metacyc_pathway_name ;
metacyc_pathway_type ;
pfam_acc PF00383; PF14437;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase;
pfam_id dCMP_cyt_deam_1; MafB19-deam;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:2.6e-11 score:42.5 best_domain_score:42.1 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:5.2e-10 score:38.5 best_domain_score:38.3 name:MafB19-deam;
sprot_desc Probable cytosine deaminase;
sprot_id sp|O59834|FCYS_SCHPO;
sprot_target db:uniprot_sprot|sp|O59834|FCYS_SCHPO 1 118 evalue:1.2e-18 qcov:100.00 identity:40.30;
57637 58635 CDS
ID metaerg.pl|05560
allko_ids K02051;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ponticoccus;s__Ponticoccus marisrubri;
genomedb_acc GCF_001482405.1;
genomedb_target db:genomedb|GCF_001482405.1|WP_058861093.1 1 330 evalue:4.9e-143 qcov:99.40 identity:79.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF09084; PF12974;
pfam_desc NMT1/THI5 like; ABC transporter, phosphonate, periplasmic substrate-binding protein;
pfam_id NMT1; Phosphonate-bd;
pfam_target db:Pfam-A.hmm|PF09084.11 evalue:5.9e-40 score:136.7 best_domain_score:136.3 name:NMT1; db:Pfam-A.hmm|PF12974.7 evalue:4.8e-10 score:38.7 best_domain_score:38.1 name:Phosphonate-bd;
sp YES;
57637 57708 signal_peptide
ID metaerg.pl|05561
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
58640 59422 CDS
ID metaerg.pl|05562
allgo_ids GO:0005524; GO:0016887;
allko_ids K02000; K02018; K02023; K10243; K01990; K11076; K05816; K02031; K01998; K10111; K10112; K02065; K01995; K02049; K02045; K11072; K02068; K02062; K01996; K02071; K06861; K02017; K02032; K11084; K02006; K02052; K02003; K01997; K05847; K02010;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Aquimixticola;s__Aquimixticola soesokkakensis;
genomedb_acc GCF_900172375.1;
genomedb_target db:genomedb|GCF_900172375.1|WP_085835217.1 1 254 evalue:4.7e-109 qcov:97.70 identity:78.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.2e-31 score:109.3 best_domain_score:108.9 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein MJ0412;
sprot_id sp|Q57855|Y412_METJA;
sprot_target db:uniprot_sprot|sp|Q57855|Y412_METJA 15 237 evalue:9.5e-56 qcov:85.80 identity:51.60;
59419 60273 CDS
ID metaerg.pl|05563
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0009229;
allko_ids K02050; K15599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Marinibacterium;s__Marinibacterium sp003217735;
genomedb_acc GCF_003217735.1;
genomedb_target db:genomedb|GCF_003217735.1|WP_111778140.1 1 281 evalue:2.0e-108 qcov:98.90 identity:79.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:5.2e-21 score:74.4 best_domain_score:74.4 name:BPD_transp_1;
sprot_desc Formylaminopyrimidine transport permease protein ThiX;
sprot_id sp|Q9K9G6|THIX_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K9G6|THIX_BACHD 40 277 evalue:2.1e-24 qcov:83.80 identity:30.30;
tm_num 6;
59419 60273 transmembrane_helix
ID metaerg.pl|05564
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology o59512-59580i59689-59757o59785-59853i59872-59940o60058-60126i60163-60231o;
60273 61631 CDS
ID metaerg.pl|05565
allec_ids 3.5.4.11;
allgo_ids GO:0016787; GO:0046872; GO:0050228;
allko_ids K03382; K01487;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Marinibacterium;s__Marinibacterium sp003217735;
genomedb_acc GCF_003217735.1;
genomedb_target db:genomedb|GCF_003217735.1|WP_111778141.1 2 445 evalue:2.8e-189 qcov:98.20 identity:73.70;
kegg_pathway_id 00230; 00791;
kegg_pathway_name Purine metabolism; Atrazine degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:2.5e-52 score:177.5 best_domain_score:177.3 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:2.3e-14 score:53.0 best_domain_score:37.9 name:Amidohydro_3;
sprot_desc Isoxanthopterin deaminase;
sprot_id sp|P0CI72|IXPDE_UNKP;
sprot_target db:uniprot_sprot|sp|P0CI72|IXPDE_UNKP 23 445 evalue:2.9e-100 qcov:93.60 identity:44.80;
61707 62705 CDS
ID metaerg.pl|05566
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ponticoccus;s__Ponticoccus marisrubri;
genomedb_acc GCF_001482405.1;
genomedb_target db:genomedb|GCF_001482405.1|WP_058861089.1 1 332 evalue:6.8e-185 qcov:100.00 identity:89.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF03171; PF14226;
pfam_desc 2OG-Fe(II) oxygenase superfamily; non-haem dioxygenase in morphine synthesis N-terminal;
pfam_id 2OG-FeII_Oxy; DIOX_N;
pfam_target db:Pfam-A.hmm|PF03171.20 evalue:2.4e-19 score:68.9 best_domain_score:68.3 name:2OG-FeII_Oxy; db:Pfam-A.hmm|PF14226.6 evalue:5.1e-20 score:71.6 best_domain_score:71.0 name:DIOX_N;
62705 63649 CDS
ID metaerg.pl|05567
allec_ids 1.14.11.-;
allgo_ids GO:0016491; GO:0055114; GO:0051213; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ponticoccus;s__Ponticoccus marisrubri;
genomedb_acc GCF_001482405.1;
genomedb_target db:genomedb|GCF_001482405.1|WP_058861088.1 1 314 evalue:1.2e-135 qcov:100.00 identity:73.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-102; PWY-5036; PWY-6085; PWY-5153; PWY-6086; PWY-5035; PWY-5070;
metacyc_pathway_name gibberellin inactivation I (2β-hydroxylation);; gibberellin biosynthesis II (early C-3 hydroxylation);; 2,4-dichlorophenoxyacetate degradation;; anthocyanin biosynthesis (delphinidin 3-O-glucoside);; 4-chloro-2-methylphenoxyacetate degradation;; gibberellin biosynthesis III (early C-13 hydroxylation);; gibberellin biosynthesis I (non C-3, non C-13 hydroxylation);;
metacyc_pathway_type GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; GIBBERELLINS-BIOSYNTHESIS;; Chloroaromatic-Compounds-Degradation;; ANTHOCYANIN-SYN;; Chloroaromatic-Compounds-Degradation;; GIBBERELLINS-BIOSYNTHESIS;; GIBBERELLINS-BIOSYNTHESIS;;
pfam_acc PF03171; PF14226;
pfam_desc 2OG-Fe(II) oxygenase superfamily; non-haem dioxygenase in morphine synthesis N-terminal;
pfam_id 2OG-FeII_Oxy; DIOX_N;
pfam_target db:Pfam-A.hmm|PF03171.20 evalue:4.1e-26 score:90.7 best_domain_score:89.8 name:2OG-FeII_Oxy; db:Pfam-A.hmm|PF14226.6 evalue:8.3e-30 score:103.2 best_domain_score:102.8 name:DIOX_N;
sprot_desc 2-oxoglutarate-Fe(II) type oxidoreductase hxnY;
sprot_id sp|C8VK14|HXNY_EMENI;
sprot_target db:uniprot_sprot|sp|C8VK14|HXNY_EMENI 4 310 evalue:1.5e-79 qcov:97.80 identity:47.00;
63633 64499 CDS
ID metaerg.pl|05568
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ponticoccus;s__Ponticoccus marisrubri;
genomedb_acc GCF_001482405.1;
genomedb_target db:genomedb|GCF_001482405.1|WP_084794308.1 1 255 evalue:1.0e-75 qcov:88.50 identity:58.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:1.3e-07 score:30.8 best_domain_score:26.2 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:2e-17 score:63.7 best_domain_score:63.4 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:1e-07 score:30.7 best_domain_score:29.9 name:Hydrolase_4;
64499 65935 CDS
ID metaerg.pl|05569
allec_ids 3.5.4.28;
allgo_ids GO:0016787; GO:0090614; GO:0046872; GO:0050270;
allko_ids K12960;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Aminobacter;s__Aminobacter sp001424795;
genomedb_acc GCF_001424795.1;
genomedb_target db:genomedb|GCF_001424795.1|WP_055973655.1 1 475 evalue:1.6e-195 qcov:99.40 identity:68.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:1.5e-46 score:158.6 best_domain_score:158.3 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:3.3e-18 score:65.6 best_domain_score:47.1 name:Amidohydro_3;
sprot_desc 5-methylthioadenosine/S-adenosylhomocysteine deaminase;
sprot_id sp|Q1MR44|MTAD_LAWIP;
sprot_target db:uniprot_sprot|sp|Q1MR44|MTAD_LAWIP 21 445 evalue:7.6e-43 qcov:88.90 identity:28.50;
67885 66215 CDS
ID metaerg.pl|05570
allgo_ids GO:0000160;
allko_ids K03407; K07637; K07654; K07682; K07652; K07646; K07641; K01120; K07673; K08475; K07639; K07711; K00873; K11354; K07778; K02575; K07768; K07651; K07718; K02478; K07679; K07648; K07642; K11711; K11356; K11640; K00760; K02484; K10909; K07704; K08282; K01937; K07708; K07645; K07677; K02491; K11231; K08479; K10916; K02668; K03388; K07710; K01768; K02489; K07716; K07653; K07636; K02482; K02480; K07678; K10715; K11527; K02030; K07650; K10681; K07676; K06379; K07644; K07709; K04757; K11357; K10125; K02486; K13761; K11383; K12767; K07769; K07717; K07675; K07647;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795725.1 9 555 evalue:5.0e-233 qcov:98.40 identity:75.10;
kegg_pathway_id 03090; 00620; 04011; 02020; 00790; 00983; 00710; 00010; 00240; 05111; 00230;
kegg_pathway_name Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Folate biosynthesis; Drug metabolism - other enzymes; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF12860; PF00072; PF07228;
pfam_desc PAS fold; Response regulator receiver domain; Stage II sporulation protein E (SpoIIE);
pfam_id PAS_7; Response_reg; SpoIIE;
pfam_target db:Pfam-A.hmm|PF12860.7 evalue:1.6e-20 score:72.6 best_domain_score:71.7 name:PAS_7; db:Pfam-A.hmm|PF00072.24 evalue:3.9e-29 score:100.3 best_domain_score:99.5 name:Response_reg; db:Pfam-A.hmm|PF07228.12 evalue:1.3e-38 score:132.1 best_domain_score:132.1 name:SpoIIE;
68069 68407 CDS
ID metaerg.pl|05571
allgo_ids GO:0000160;
allko_ids K07677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795724.1 1 108 evalue:7.9e-29 qcov:96.40 identity:58.30;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01627;
pfam_desc Hpt domain;
pfam_id Hpt;
pfam_target db:Pfam-A.hmm|PF01627.23 evalue:1.3e-11 score:43.9 best_domain_score:43.5 name:Hpt;
69670 68423 CDS
ID metaerg.pl|05572
allec_ids 4.3.1.19;
allgo_ids GO:0004794; GO:0030170; GO:0009097; GO:0006567; GO:0006566;
allko_ids K01733; K01754;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796046.1 1 415 evalue:9.6e-189 qcov:100.00 identity:80.00;
kegg_pathway_id 00260; 00750; 00290;
kegg_pathway_name Glycine, serine and threonine metabolism; Vitamin B6 metabolism; Valine, leucine and isoleucine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id BRANCHED-CHAIN-AA-SYN-PWY; PWY-3001; ILEUSYN-PWY; THREOCAT-PWY; PWY-5826; PWY-5437;
metacyc_pathway_name superpathway of branched chain amino acid biosynthesis;; superpathway of L-isoleucine biosynthesis I;; L-isoleucine biosynthesis I (from threonine);; superpathway of L-threonine metabolism;; hypoglycin biosynthesis;; L-threonine degradation I;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; ISOLEUCINE-SYN;; Super-Pathways; THREONINE-DEG;; SECONDARY-METABOLITE-BIOSYNTHESIS;; THREONINE-DEG;;
pfam_acc PF00291; PF00585;
pfam_desc Pyridoxal-phosphate dependent enzyme; C-terminal regulatory domain of Threonine dehydratase;
pfam_id PALP; Thr_dehydrat_C;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:1.1e-71 score:240.9 best_domain_score:240.5 name:PALP; db:Pfam-A.hmm|PF00585.18 evalue:3e-19 score:67.8 best_domain_score:67.1 name:Thr_dehydrat_C;
sprot_desc L-threonine dehydratase biosynthetic IlvA;
sprot_id sp|P37946|ILVA_BACSU;
sprot_target db:uniprot_sprot|sp|P37946|ILVA_BACSU 11 415 evalue:3.8e-99 qcov:97.60 identity:46.80;
tigrfam_acc TIGR02079;
tigrfam_desc threonine dehydratase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name THD1;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR02079 evalue:8.7e-166 score:550.9 best_domain_score:550.6 name:TIGR02079;
70089 69667 CDS
ID metaerg.pl|05573
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470985.1 1 135 evalue:3.1e-54 qcov:96.40 identity:74.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF03061; PF13279;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily;
pfam_id 4HBT; 4HBT_2;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:4.1e-09 score:35.9 best_domain_score:35.4 name:4HBT; db:Pfam-A.hmm|PF13279.6 evalue:1.1e-14 score:54.2 best_domain_score:53.9 name:4HBT_2;
70223 71461 CDS
ID metaerg.pl|05574
allec_ids 6.3.4.5;
allgo_ids GO:0004055; GO:0005524; GO:0006526; GO:0005737;
allko_ids K01940; K01955;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795723.1 1 410 evalue:2.9e-222 qcov:99.50 identity:93.70;
kegg_pathway_id 00330; 00251; 00252; 00220; 00240;
kegg_pathway_name Arginine and proline metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id ARGSYN-PWY; PWY-4983; PWY-5154; PWY-5; ARG+POLYAMINE-SYN; ARGININE-SYN4-PWY; ARGSYNBSUB-PWY; PWY-5004; PWY-4984;
metacyc_pathway_name L-arginine biosynthesis I (via L-ornithine);; nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; canavanine biosynthesis;; superpathway of arginine and polyamine biosynthesis;; L-ornithine biosynthesis II;; L-arginine biosynthesis II (acetyl cycle);; superpathway of L-citrulline metabolism;; urea cycle;;
metacyc_pathway_type ARGININE-SYN; Super-Pathways;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN;; NON-PROTEIN-AMINO-ACID-SYN;; Polyamine-Biosynthesis; Super-Pathways;; L-Ornithine-Biosynthesis;; ARGININE-SYN;; Citrulline-Biosynthesis; Super-Pathways;; NITROGEN-DEG;;
pfam_acc PF00764;
pfam_desc Arginosuccinate synthase;
pfam_id Arginosuc_synth;
pfam_target db:Pfam-A.hmm|PF00764.19 evalue:3.9e-151 score:503.0 best_domain_score:502.8 name:Arginosuc_synth;
sprot_desc Argininosuccinate synthase;
sprot_id sp|Q1GCK1|ASSY_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GCK1|ASSY_RUEST 6 410 evalue:1.1e-215 qcov:98.30 identity:90.40;
tigrfam_acc TIGR00032;
tigrfam_desc argininosuccinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argG;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00032 evalue:6.2e-140 score:466.1 best_domain_score:465.9 name:TIGR00032;
71545 73062 CDS
ID metaerg.pl|05575
allec_ids 5.4.2.12;
allgo_ids GO:0004619; GO:0005737; GO:0006007; GO:0030145; GO:0046537; GO:0006096;
allko_ids K01834; K15633;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795722.1 1 502 evalue:4.5e-241 qcov:99.40 identity:82.90;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF06415; PF01676; PF01663;
pfam_desc BPG-independent PGAM N-terminus (iPGM_N); Metalloenzyme superfamily; Type I phosphodiesterase / nucleotide pyrophosphatase;
pfam_id iPGM_N; Metalloenzyme; Phosphodiest;
pfam_target db:Pfam-A.hmm|PF06415.13 evalue:1.9e-64 score:216.3 best_domain_score:215.3 name:iPGM_N; db:Pfam-A.hmm|PF01676.18 evalue:2.1e-70 score:236.2 best_domain_score:236.0 name:Metalloenzyme; db:Pfam-A.hmm|PF01663.22 evalue:1.4e-05 score:24.1 best_domain_score:21.6 name:Phosphodiest;
sp YES;
sprot_desc 2,3-bisphosphoglycerate-independent phosphoglycerate mutase;
sprot_id sp|A4WWV3|GPMI_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WWV3|GPMI_RHOS5 3 502 evalue:6.7e-207 qcov:99.00 identity:71.20;
tigrfam_acc TIGR01307;
tigrfam_desc phosphoglycerate mutase (2,3-diphosphoglycerate-independent);
tigrfam_mainrole Energy metabolism;
tigrfam_name pgm_bpd_ind;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01307 evalue:2.5e-181 score:602.7 best_domain_score:602.5 name:TIGR01307;
71545 71625 signal_peptide
ID metaerg.pl|05576
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
73059 74165 CDS
ID metaerg.pl|05577
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795721.1 5 366 evalue:2.1e-134 qcov:98.40 identity:72.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:9e-10 score:37.9 best_domain_score:34.7 name:Peptidase_M23;
sp YES;
73059 73121 signal_peptide
ID metaerg.pl|05578
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
74222 75556 CDS
ID metaerg.pl|05579
allec_ids 3.4.21.102; 3.4.21.-;
allgo_ids GO:0005515; GO:0005576; GO:0008236;
allko_ids K03797;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470980.1 1 444 evalue:4.2e-214 qcov:100.00 identity:85.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00595; PF13180; PF17820; PF03572;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Peptidase family S41;
pfam_id PDZ; PDZ_2; PDZ_6; Peptidase_S41;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:3.8e-10 score:39.2 best_domain_score:38.2 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:1e-12 score:47.4 best_domain_score:46.3 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:5.7e-15 score:54.1 best_domain_score:52.4 name:PDZ_6; db:Pfam-A.hmm|PF03572.18 evalue:5.5e-53 score:178.2 best_domain_score:177.5 name:Peptidase_S41;
sp YES;
sprot_desc Carboxy-terminal-processing protease;
sprot_id sp|Q44879|CTPA_BARBK;
sprot_target db:uniprot_sprot|sp|Q44879|CTPA_BARBK 33 437 evalue:4.3e-109 qcov:91.20 identity:53.30;
tigrfam_acc TIGR00225;
tigrfam_desc C-terminal processing peptidase;
tigrfam_mainrole Protein fate;
tigrfam_name prc;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00225 evalue:6.7e-97 score:323.7 best_domain_score:323.2 name:TIGR00225;
tm_num 1;
74222 74305 signal_peptide
ID metaerg.pl|05580
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
74222 75556 transmembrane_helix
ID metaerg.pl|05581
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i74234-74302o;
75556 76047 CDS
ID metaerg.pl|05582
allec_ids 3.6.1.-;
allgo_ids GO:0016787; GO:0016818;
allko_ids K08311;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795719.1 1 163 evalue:1.0e-72 qcov:100.00 identity:79.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-5354; PWY-6404; PWY-6383; FOLSYN-PWY; ALL-CHORISMATE-PWY; PWY-6147; PWY-6502;
metacyc_pathway_name ; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; oxidized GTP and dGTP detoxification;;
metacyc_pathway_type ; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;; 6-HM-Dihydropterin-PP-Biosynthesis;; Detoxification; Metabolic-Clusters;;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:4.1e-23 score:81.1 best_domain_score:80.8 name:NUDIX;
sprot_desc RNA pyrophosphohydrolase;
sprot_id sp|A4WWV6|RPPH_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WWV6|RPPH_RHOS5 9 163 evalue:2.9e-50 qcov:95.10 identity:58.70;
76128 77306 CDS
ID metaerg.pl|05583
allec_ids 2.1.1.192;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0070040; GO:0019843; GO:0002935; GO:0000049; GO:0070475;
allko_ids K06941;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795718.1 1 392 evalue:5.3e-213 qcov:100.00 identity:93.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF04055;
pfam_desc Radical SAM superfamily;
pfam_id Radical_SAM;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:3.7e-17 score:62.4 best_domain_score:61.0 name:Radical_SAM;
sprot_desc Dual-specificity RNA methyltransferase RlmN;
sprot_id sp|A1B4Z8|RLMN_PARDP;
sprot_target db:uniprot_sprot|sp|A1B4Z8|RLMN_PARDP 5 390 evalue:7.8e-195 qcov:98.50 identity:85.50;
tigrfam_acc TIGR00048;
tigrfam_desc 23S rRNA (adenine(2503)-C(2))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name rRNA_mod_RlmN;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00048 evalue:1.8e-117 score:391.4 best_domain_score:391.1 name:TIGR00048;
77311 77547 CDS
ID metaerg.pl|05584
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480985.1 1 78 evalue:7.5e-26 qcov:100.00 identity:82.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
tm_num 3;
77311 77547 transmembrane_helix
ID metaerg.pl|05585
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology o77320-77373i77392-77460o77470-77526i;
78163 77558 CDS
ID metaerg.pl|05586
allgo_ids GO:0010181;
allko_ids K00492;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479792.1 1 201 evalue:3.4e-99 qcov:100.00 identity:85.60;
kegg_pathway_id 00903; 00340; 00360; 00350; 00680; 00626; 00622; 00624; 00150; 00120; 00361;
kegg_pathway_name Limonene and pinene degradation; Histidine metabolism; Phenylalanine metabolism; Tyrosine metabolism; Methane metabolism; Naphthalene and anthracene degradation; Toluene and xylene degradation; 1- and 2-Methylnaphthalene degradation; Androgen and estrogen metabolism; Bile acid biosynthesis; gamma-Hexachlorocyclohexane degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01613;
pfam_desc Flavin reductase like domain;
pfam_id Flavin_Reduct;
pfam_target db:Pfam-A.hmm|PF01613.18 evalue:1.9e-18 score:66.2 best_domain_score:65.8 name:Flavin_Reduct;
sprot_desc hypothetical protein;
sprot_id sp|Q9RRA9|Y2585_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RRA9|Y2585_DEIRA 18 198 evalue:1.4e-22 qcov:90.00 identity:38.10;
78242 78766 CDS
ID metaerg.pl|05587
allko_ids K06957;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795715.1 1 157 evalue:7.6e-71 qcov:90.20 identity:82.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00583; PF13508; PF13527;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_7; Acetyltransf_9;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:3e-08 score:33.1 best_domain_score:32.8 name:Acetyltransf_1; db:Pfam-A.hmm|PF13508.7 evalue:8.1e-07 score:28.6 best_domain_score:28.1 name:Acetyltransf_7; db:Pfam-A.hmm|PF13527.7 evalue:2e-06 score:27.1 best_domain_score:26.4 name:Acetyltransf_9;
80988 78742 CDS
ID metaerg.pl|05588
allec_ids 2.7.3.9;
allgo_ids GO:0005515; GO:0005737; GO:0016301; GO:0046872; GO:0008965; GO:0009401;
allko_ids K02806; K02478; K02812; K02821; K00873; K13533; K08483; K07646; K01006; K02769; K02491; K08484; K07704; K00760; K02770; K02768; K08801; K11189; K02794; K01768; K11201; K11183; K02793; K04757; K01007; K05881; K02744;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479050.1 1 748 evalue:0.0e+00 qcov:100.00 identity:89.80;
kegg_pathway_id 00710; 00010; 00983; 00720; 00230; 02020; 00620; 02060;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Drug metabolism - other enzymes; Reductive carboxylate cycle (CO2 fixation); Purine metabolism; Two-component system - General; Pyruvate metabolism; Phosphotransferase system (PTS);
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01590; PF13185; PF05524; PF00391; PF02896;
pfam_desc GAF domain; GAF domain; PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain;
pfam_id GAF; GAF_2; PEP-utilisers_N; PEP-utilizers; PEP-utilizers_C;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:7.2e-11 score:42.1 best_domain_score:40.3 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:4.6e-14 score:52.1 best_domain_score:49.1 name:GAF_2; db:Pfam-A.hmm|PF05524.13 evalue:3.1e-19 score:68.5 best_domain_score:67.3 name:PEP-utilisers_N; db:Pfam-A.hmm|PF00391.23 evalue:1.2e-16 score:59.4 best_domain_score:58.3 name:PEP-utilizers; db:Pfam-A.hmm|PF02896.18 evalue:1.6e-77 score:259.8 best_domain_score:259.1 name:PEP-utilizers_C;
sprot_desc Phosphoenolpyruvate-protein phosphotransferase;
sprot_id sp|O07126|PT1_LACSK;
sprot_target db:uniprot_sprot|sp|O07126|PT1_LACSK 183 724 evalue:2.0e-74 qcov:72.50 identity:31.60;
tigrfam_acc TIGR01417;
tigrfam_desc phosphoenolpyruvate-protein phosphotransferase;
tigrfam_name PTS_I_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01417 evalue:1.4e-108 score:362.9 best_domain_score:362.6 name:TIGR01417;
82277 81021 CDS
ID metaerg.pl|05589
allec_ids 2.7.2.4;
allgo_ids GO:0005829; GO:0004072; GO:0005524; GO:0019877; GO:0009090; GO:0009089; GO:0009088;
allko_ids K12657; K12526; K00931; K12525; K00003; K00928; K12524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072244513.1 1 418 evalue:3.8e-217 qcov:100.00 identity:95.00;
kegg_pathway_id 00220; 00260; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Glycine, serine and threonine metabolism; Lysine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id MET-SAM-PWY; PWY-6559; PWY-2941; P4-PWY; PWY-3001; PWY-5345; P101-PWY; PWY-5347; DAPLYSINESYN-PWY; PWY-6565; PWY-5097; PWY0-781; PWY-6562; METSYN-PWY; HOMOSERSYN-PWY; PWY-724; THRESYN-PWY;
metacyc_pathway_name superpathway of S-adenosyl-L-methionine biosynthesis;; spermidine biosynthesis II;; L-lysine biosynthesis II;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-methionine biosynthesis (by sulfhydrylation);; ectoine biosynthesis;; superpathway of L-methionine biosynthesis (transsulfuration);; L-lysine biosynthesis I;; superpathway of polyamine biosynthesis III;; L-lysine biosynthesis VI;; aspartate superpathway;; norspermidine biosynthesis;; superpathway of L-homoserine and L-methionine biosynthesis;; L-homoserine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of L-threonine biosynthesis;;
metacyc_pathway_type Super-Pathways;; Spermidine-Biosynthesis;; LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis;; Methionine-De-novo-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Super-Pathways;; Polyamine-Biosynthesis;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways; THREONINE-BIOSYNTHESIS;;
pfam_acc PF00696; PF01842; PF13840;
pfam_desc Amino acid kinase family; ACT domain; ACT domain;
pfam_id AA_kinase; ACT; ACT_7;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:2.7e-42 score:144.3 best_domain_score:143.5 name:AA_kinase; db:Pfam-A.hmm|PF01842.25 evalue:7.6e-21 score:72.8 best_domain_score:47.3 name:ACT; db:Pfam-A.hmm|PF13840.6 evalue:9.3e-22 score:75.8 best_domain_score:58.9 name:ACT_7;
sprot_desc Aspartokinase;
sprot_id sp|O69077|AK_PSEAE;
sprot_target db:uniprot_sprot|sp|O69077|AK_PSEAE 1 415 evalue:5.3e-109 qcov:99.30 identity:54.00;
tigrfam_acc TIGR00656; TIGR00657;
tigrfam_desc aspartate kinase, monofunctional class; aspartate kinase;
tigrfam_mainrole Amino acid biosynthesis; Amino acid biosynthesis;
tigrfam_name asp_kin_monofn; asp_kinases;
tigrfam_sub1role Aspartate family; Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00656 evalue:2.4e-122 score:408.0 best_domain_score:407.8 name:TIGR00656; db:TIGRFAMs.hmm|TIGR00657 evalue:3.8e-130 score:434.1 best_domain_score:377.5 name:TIGR00657;
82903 82445 CDS
ID metaerg.pl|05590
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
83180 83788 CDS
ID metaerg.pl|05591
allgo_ids GO:0008654; GO:0016020; GO:0016780; GO:0016021; GO:0005886;
allko_ids K00998;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795706.1 1 201 evalue:2.7e-80 qcov:99.50 identity:78.60;
kegg_pathway_id 00564; 00260;
kegg_pathway_name Glycerophospholipid metabolism; Glycine, serine and threonine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01066;
pfam_desc CDP-alcohol phosphatidyltransferase;
pfam_id CDP-OH_P_transf;
pfam_target db:Pfam-A.hmm|PF01066.21 evalue:2.3e-12 score:46.7 best_domain_score:46.7 name:CDP-OH_P_transf;
sprot_desc Inner membrane protein YnjF;
sprot_id sp|P76226|YNJF_ECOLI;
sprot_target db:uniprot_sprot|sp|P76226|YNJF_ECOLI 1 193 evalue:1.8e-33 qcov:95.50 identity:42.50;
tm_num 5;
83180 83788 transmembrane_helix
ID metaerg.pl|05592
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology o83288-83356i83417-83485o83513-83581i83618-83686o83699-83767i;
84655 83801 CDS
ID metaerg.pl|05593
allec_ids 2.3.2.29;
allgo_ids GO:0004057; GO:0016598; GO:0005737; GO:0008914; GO:0071596;
allko_ids K21420;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795704.1 1 280 evalue:5.5e-135 qcov:98.60 identity:85.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF04377; PF04376;
pfam_desc Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus;
pfam_id ATE_C; ATE_N;
pfam_target db:Pfam-A.hmm|PF04377.15 evalue:9.1e-34 score:116.2 best_domain_score:114.7 name:ATE_C; db:Pfam-A.hmm|PF04376.13 evalue:4.3e-17 score:61.5 best_domain_score:60.7 name:ATE_N;
sprot_desc Aspartate/glutamate leucyltransferase;
sprot_id sp|A8LSL0|BPT_DINSH;
sprot_target db:uniprot_sprot|sp|A8LSL0|BPT_DINSH 1 272 evalue:4.3e-110 qcov:95.80 identity:69.10;
85168 84734 CDS
ID metaerg.pl|05594
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795703.1 1 140 evalue:8.6e-52 qcov:97.20 identity:77.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF06271;
pfam_desc RDD family;
pfam_id RDD;
pfam_target db:Pfam-A.hmm|PF06271.12 evalue:5.4e-12 score:45.4 best_domain_score:44.8 name:RDD;
tm_num 2;
85168 84734 transmembrane_helix
ID metaerg.pl|05595
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i84794-84862o84872-84931i;
85632 85165 CDS
ID metaerg.pl|05596
allgo_ids GO:0002161;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468460.1 1 155 evalue:2.3e-58 qcov:100.00 identity:76.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF04073;
pfam_desc Aminoacyl-tRNA editing domain;
pfam_id tRNA_edit;
pfam_target db:Pfam-A.hmm|PF04073.15 evalue:3.3e-23 score:81.3 best_domain_score:81.1 name:tRNA_edit;
86954 85632 CDS
ID metaerg.pl|05597
allec_ids 2.6.1.18;
allgo_ids GO:0008483; GO:0030170; GO:0004015; GO:0016223; GO:0019483; GO:0009102;
allko_ids K00821; K05830; K00818; K00822;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481459.1 1 440 evalue:4.8e-247 qcov:100.00 identity:95.50;
kegg_pathway_id 00252; 00220; 00280; 00410; 00300; 00640;
kegg_pathway_name Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Valine, leucine and isoleucine degradation; beta-Alanine metabolism; Lysine biosynthesis; Propanoate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-4221; PWY-1781; PWY-3941;
metacyc_pathway_name superpathway of coenzyme A biosynthesis II (plants);; β-alanine degradation II;; β-alanine biosynthesis II;;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways;; Beta-Alanine-Degradation;; Beta-Alanine-Biosynthesis;;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:5e-103 score:344.1 best_domain_score:343.9 name:Aminotran_3;
sprot_desc Beta-alanine--pyruvate aminotransferase;
sprot_id sp|Q9I700|BAUA_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I700|BAUA_PSEAE 10 437 evalue:5.2e-123 qcov:97.30 identity:49.40;
88430 87075 CDS
ID metaerg.pl|05598
allgo_ids GO:0016021; GO:0005886; GO:0015556; GO:0022857; GO:0015740;
allko_ids K11690;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795700.1 1 451 evalue:2.6e-224 qcov:100.00 identity:95.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:3.2e-84 score:282.4 best_domain_score:282.2 name:DctM;
sprot_desc C4-dicarboxylate TRAP transporter large permease protein DctM;
sprot_id sp|Q9KQS1|DCTM_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KQS1|DCTM_VIBCH 8 447 evalue:7.9e-34 qcov:97.60 identity:29.50;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:1.5e-90 score:303.0 best_domain_score:302.6 name:TIGR00786;
tm_num 13;
88430 87075 transmembrane_helix
ID metaerg.pl|05599
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i87093-87161o87171-87239i87273-87341o87420-87488i87546-87614o87642-87710i87771-87839o87867-87935i87972-88025o88068-88136i88155-88223o88251-88319i88338-88406o;
89083 88481 CDS
ID metaerg.pl|05600
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795699.1 1 200 evalue:1.3e-85 qcov:100.00 identity:82.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:1.3e-22 score:79.4 best_domain_score:78.9 name:DctQ;
tm_num 4;
89083 88481 transmembrane_helix
ID metaerg.pl|05601
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology i88604-88672o88715-88768i88829-88897o88964-89032i;
90247 89186 CDS
ID metaerg.pl|05602
allgo_ids GO:0055085; GO:0042597; GO:0031317; GO:0046872; GO:0043177; GO:0042803; GO:0015849; GO:0071702;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795698.1 1 353 evalue:6.5e-194 qcov:100.00 identity:92.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:3.3e-41 score:140.7 best_domain_score:140.4 name:DctP;
sp YES;
sprot_desc Alpha-keto acid-binding periplasmic protein TakP;
sprot_id sp|Q3J1R2|TAKP_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J1R2|TAKP_RHOS4 6 340 evalue:3.1e-49 qcov:94.90 identity:32.60;
89186 89248 signal_peptide
ID metaerg.pl|05603
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
90554 93370 CDS
ID metaerg.pl|05604
allec_ids 2.7.7.89; 2.7.7.42;
allgo_ids GO:0016779; GO:0008882; GO:0047388; GO:0005524; GO:0003700; GO:0000287; GO:0043565; GO:0008152; GO:0000820;
allko_ids K00982;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795697.1 1 926 evalue:0.0e+00 qcov:98.70 identity:82.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF08335; PF03710;
pfam_desc GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase;
pfam_id GlnD_UR_UTase; GlnE;
pfam_target db:Pfam-A.hmm|PF08335.11 evalue:2.6e-46 score:156.6 best_domain_score:133.1 name:GlnD_UR_UTase; db:Pfam-A.hmm|PF03710.15 evalue:3.5e-120 score:399.3 best_domain_score:207.6 name:GlnE;
sprot_desc Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme;
sprot_id sp|Q985F6|GLNE_RHILO;
sprot_target db:uniprot_sprot|sp|Q985F6|GLNE_RHILO 18 927 evalue:3.7e-166 qcov:97.00 identity:38.70;
93354 93605 CDS
ID metaerg.pl|05605
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246567.1 6 82 evalue:3.7e-23 qcov:92.80 identity:71.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
93609 93836 CDS
ID metaerg.pl|05606
allgo_ids GO:0005737; GO:0097163; GO:0002143;
allko_ids K04085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468453.1 1 74 evalue:1.3e-27 qcov:98.70 identity:83.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF01206;
pfam_desc Sulfurtransferase TusA;
pfam_id TusA;
pfam_target db:Pfam-A.hmm|PF01206.17 evalue:1e-21 score:75.8 best_domain_score:75.6 name:TusA;
sprot_desc Sulfur carrier protein TusA;
sprot_id sp|Q65W80|TUSA_MANSM;
sprot_target db:uniprot_sprot|sp|Q65W80|TUSA_MANSM 3 75 evalue:1.0e-10 qcov:97.30 identity:42.50;
94777 93848 CDS
ID metaerg.pl|05607
allgo_ids GO:0016021; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798346.1 1 309 evalue:8.0e-148 qcov:100.00 identity:87.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF03547;
pfam_desc Membrane transport protein;
pfam_id Mem_trans;
pfam_target db:Pfam-A.hmm|PF03547.18 evalue:5.4e-31 score:106.6 best_domain_score:62.6 name:Mem_trans;
tm_num 10;
94777 93848 transmembrane_helix
ID metaerg.pl|05608
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
topology o93857-93910i93947-94015o94043-94111i94130-94189o94217-94285i94346-94414o94442-94495i94529-94588o94616-94684i94703-94771o;
95580 94783 CDS
ID metaerg.pl|05609
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469104.1 1 265 evalue:1.3e-133 qcov:100.00 identity:84.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00753; PF12706;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:4.9e-08 score:32.5 best_domain_score:32.2 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:8.1e-33 score:112.9 best_domain_score:112.5 name:Lactamase_B_2;
96365 95580 CDS
ID metaerg.pl|05610
allec_ids 3.1.-.-;
allgo_ids GO:0016788; GO:0005829; GO:0016888; GO:0046872;
allko_ids K03424;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798350.1 4 261 evalue:1.0e-119 qcov:98.90 identity:84.50;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01026;
pfam_desc TatD related DNase;
pfam_id TatD_DNase;
pfam_target db:Pfam-A.hmm|PF01026.21 evalue:4.4e-71 score:238.5 best_domain_score:238.3 name:TatD_DNase;
sprot_desc Uncharacterized metal-dependent hydrolase HI_0454;
sprot_id sp|P44718|Y454_HAEIN;
sprot_target db:uniprot_sprot|sp|P44718|Y454_HAEIN 6 257 evalue:5.6e-48 qcov:96.60 identity:41.60;
tigrfam_acc TIGR00010;
tigrfam_desc hydrolase, TatD family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00010;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00010 evalue:7.6e-78 score:260.6 best_domain_score:260.4 name:TIGR00010;
97496 96387 CDS
ID metaerg.pl|05611
allgo_ids GO:0005524;
allko_ids K02341; K02340; K02343;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798352.1 1 369 evalue:1.2e-166 qcov:100.00 identity:83.20;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF00004; PF13177;
pfam_desc ATPase family associated with various cellular activities (AAA); DNA polymerase III, delta subunit;
pfam_id AAA; DNA_pol3_delta2;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1.1e-05 score:25.1 best_domain_score:22.2 name:AAA; db:Pfam-A.hmm|PF13177.6 evalue:2e-31 score:108.2 best_domain_score:106.0 name:DNA_pol3_delta2;
98127 97489 CDS
ID metaerg.pl|05612
allec_ids 2.7.4.9;
allgo_ids GO:0005524; GO:0004798; GO:0006233; GO:0006235;
allko_ids K00943;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798354.1 8 212 evalue:5.4e-87 qcov:96.70 identity:81.50;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-6545; P1-PWY; PWY0-166;
metacyc_pathway_name pyrimidine deoxyribonucleotides de novo biosynthesis III;; ; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);;
metacyc_pathway_type Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;; ; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF02223;
pfam_desc Thymidylate kinase;
pfam_id Thymidylate_kin;
pfam_target db:Pfam-A.hmm|PF02223.17 evalue:1.6e-43 score:147.8 best_domain_score:147.6 name:Thymidylate_kin;
sprot_desc Thymidylate kinase;
sprot_id sp|A8LRW0|KTHY_DINSH;
sprot_target db:uniprot_sprot|sp|A8LRW0|KTHY_DINSH 8 206 evalue:1.8e-76 qcov:93.90 identity:74.40;
tigrfam_acc TIGR00041;
tigrfam_desc dTMP kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name DTMP_kinase;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00041 evalue:6.9e-45 score:152.3 best_domain_score:152.1 name:TIGR00041;
99304 98132 CDS
ID metaerg.pl|05613
allec_ids 3.4.16.4;
allgo_ids GO:0006508; GO:0009002; GO:0005576; GO:0004175; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01286; K07258;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657677.1 4 390 evalue:5.3e-173 qcov:99.20 identity:81.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
metacyc_pathway_id PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF13354; PF07943; PF00768;
pfam_desc Beta-lactamase enzyme family; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase;
pfam_id Beta-lactamase2; PBP5_C; Peptidase_S11;
pfam_target db:Pfam-A.hmm|PF13354.6 evalue:2.7e-12 score:46.0 best_domain_score:45.5 name:Beta-lactamase2; db:Pfam-A.hmm|PF07943.13 evalue:2.8e-11 score:42.8 best_domain_score:42.0 name:PBP5_C; db:Pfam-A.hmm|PF00768.20 evalue:2.8e-51 score:173.5 best_domain_score:173.0 name:Peptidase_S11;
sp YES;
sprot_desc D-alanyl-D-alanine carboxypeptidase DacF;
sprot_id sp|P38422|DACF_BACSU;
sprot_target db:uniprot_sprot|sp|P38422|DACF_BACSU 1 366 evalue:4.6e-38 qcov:93.80 identity:29.80;
98132 98203 signal_peptide
ID metaerg.pl|05614
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
100346 99327 CDS
ID metaerg.pl|05615
allgo_ids GO:0042834;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798358.1 1 339 evalue:4.3e-86 qcov:100.00 identity:59.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF05036;
pfam_desc Sporulation related domain;
pfam_id SPOR;
pfam_target db:Pfam-A.hmm|PF05036.13 evalue:4.1e-11 score:42.4 best_domain_score:41.1 name:SPOR;
sp YES;
99327 99389 lipoprotein_signal_peptide
ID metaerg.pl|05616
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
102120 100747 CDS
ID metaerg.pl|05617
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Jannaschia;s__Jannaschia pohangensis;
genomedb_acc GCF_900113875.1;
genomedb_target db:genomedb|GCF_900113875.1|WP_092778163.1 3 433 evalue:2.8e-96 qcov:94.30 identity:41.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0028696; 202.04; 0.326301; 202.801; 0.431928;
pfam_acc PF04326;
pfam_desc Putative DNA-binding domain;
pfam_id AlbA_2;
pfam_target db:Pfam-A.hmm|PF04326.14 evalue:1.5e-12 score:47.2 best_domain_score:46.2 name:AlbA_2;
>Feature NODE_34_length_102149_cov_15.6997
1237 482 CDS
ID metaerg.pl|05618
allec_ids 3.4.22.70; 3.4.22.-;
allgo_ids GO:0016021; GO:0005886; GO:0008233;
allko_ids K07284;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441211.1 19 231 evalue:8.4e-63 qcov:84.90 identity:61.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF04203;
pfam_desc Sortase domain;
pfam_id Sortase;
pfam_target db:Pfam-A.hmm|PF04203.13 evalue:5e-27 score:93.4 best_domain_score:93.0 name:Sortase;
sprot_desc Sortase SrtE1;
sprot_id sp|Q9XA14|SRTE1_STRCO;
sprot_target db:uniprot_sprot|sp|Q9XA14|SRTE1_STRCO 2 233 evalue:2.7e-15 qcov:92.40 identity:27.60;
tigrfam_acc TIGR01076;
tigrfam_desc sortase;
tigrfam_mainrole Protein fate;
tigrfam_name sortase_fam;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01076 evalue:5.8e-13 score:48.0 best_domain_score:47.4 name:TIGR01076;
tm_num 1;
1237 482 transmembrane_helix
ID metaerg.pl|05619
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i500-568o;
1346 1618 CDS
ID metaerg.pl|05620
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441212.1 1 90 evalue:7.8e-19 qcov:100.00 identity:54.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF06781;
pfam_desc Cell division protein CrgA;
pfam_id CrgA;
pfam_target db:Pfam-A.hmm|PF06781.12 evalue:9e-14 score:50.5 best_domain_score:50.3 name:CrgA;
tm_num 2;
1346 1618 transmembrane_helix
ID metaerg.pl|05621
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology o1436-1504i1538-1606o;
2211 1891 CDS
ID metaerg.pl|05622
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664931.1 2 105 evalue:2.2e-20 qcov:98.10 identity:50.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 1;
2211 1891 transmembrane_helix
ID metaerg.pl|05623
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i1894-1962o;
3560 2361 CDS
ID metaerg.pl|05624
allec_ids 2.3.1.16;
allgo_ids GO:0016747; GO:0005737; GO:0003988; GO:0006635;
allko_ids K07508; K07823; K07513; K07550; K07509; K00632; K00626; K02615;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108665975.1 1 398 evalue:1.5e-154 qcov:99.70 identity:71.00;
kegg_pathway_id 00071; 02020; 00072; 00281; 00280; 00310; 00640; 00650; 00592; 01040; 00362; 00062; 00620; 00380; 00120; 00632;
kegg_pathway_name Fatty acid metabolism; Two-component system - General; Synthesis and degradation of ketone bodies; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; Propanoate metabolism; Butanoate metabolism; alpha-Linolenic acid metabolism; Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation; Fatty acid elongation in mitochondria; Pyruvate metabolism; Tryptophan metabolism; Bile acid biosynthesis; Benzoate degradation via CoA ligation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id FAO-PWY; PWY-6435; PWY-561; PWY-5136;
metacyc_pathway_name fatty acid β-oxidation I;; 4-hydroxybenzoate biosynthesis III (plants);; superpathway of glyoxylate cycle and fatty acid degradation;; fatty acid β-oxidation II (peroxisome);;
metacyc_pathway_type Fatty-Acid-Degradation;; 4-Hydroxybenzoate-Biosynthesis;; Energy-Metabolism; Super-Pathways;; Fatty-Acid-Degradation;;
pfam_acc PF00109; PF02803; PF00108;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id ketoacyl-synt; Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:5.2e-05 score:22.2 best_domain_score:22.0 name:ketoacyl-synt; db:Pfam-A.hmm|PF02803.18 evalue:6.9e-40 score:134.8 best_domain_score:133.9 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:1.1e-63 score:214.3 best_domain_score:213.6 name:Thiolase_N;
sprot_desc 3-ketoacyl-CoA thiolase;
sprot_id sp|B2VFE0|FADA_ERWT9;
sprot_target db:uniprot_sprot|sp|B2VFE0|FADA_ERWT9 1 398 evalue:5.9e-73 qcov:99.70 identity:43.00;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:2.6e-129 score:430.7 best_domain_score:430.5 name:TIGR01930;
5234 3696 CDS
ID metaerg.pl|05625
allec_ids 3.4.19.13;
allgo_ids GO:0036374; GO:0102953; GO:0103068; GO:0006750; GO:0006751;
allko_ids K00681;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664932.1 6 506 evalue:4.2e-133 qcov:97.90 identity:56.00;
kegg_pathway_id 00430; 00460; 00590; 00450; 00480;
kegg_pathway_name Taurine and hypotaurine metabolism; Cyanoamino acid metabolism; Arachidonic acid metabolism; Selenoamino acid metabolism; Glutathione metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF01019;
pfam_desc Gamma-glutamyltranspeptidase;
pfam_id G_glu_transpept;
pfam_target db:Pfam-A.hmm|PF01019.21 evalue:1.1e-90 score:304.1 best_domain_score:298.9 name:G_glu_transpept;
sprot_desc Glutathione hydrolase proenzyme;
sprot_id sp|P74181|GGT_SYNY3;
sprot_target db:uniprot_sprot|sp|P74181|GGT_SYNY3 5 508 evalue:5.2e-74 qcov:98.40 identity:36.90;
5761 5285 CDS
ID metaerg.pl|05626
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 3;
5761 5285 transmembrane_helix
ID metaerg.pl|05627
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i5471-5539o5582-5650i5675-5743o;
5932 6007 tRNA
ID metaerg.pl|05628
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
name tRNA_Ala_tgc;
6254 7570 CDS
ID metaerg.pl|05629
allec_ids 2.5.1.-;
allgo_ids GO:0030170; GO:0016765; GO:0009086;
allko_ids K01740;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces actuosus;
genomedb_acc GCF_003208035.1;
genomedb_target db:genomedb|GCF_003208035.1|WP_110635109.1 3 435 evalue:1.9e-195 qcov:98.90 identity:79.70;
kegg_pathway_id 00271; 00272;
kegg_pathway_name Methionine metabolism; Cysteine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id PWY-6263; PWY-5132; PWY-5897; PWY-5808; POLYISOPRENSYN-PWY; PWY-5805; PWY-5783; PWY-724; PWY-5861; PWY-6262; PWY-6404; PWY-5806; PWY-5135; PWY-5140; PWY-5701; PWY-5068; PWY-2681; PWY-5896; PWY-5862; PWY-5845; PWY-5816; PWY-5863; PWY-5898; PWY-6403; PWY-5817; PWY-5134; PWY-6520; PWY-5899; PWY-5838; PWY-4502; PWY-5064; PWY-5893; PWY-5027; PWY-6383; PWY-6129; PWY-5133; PWY-5864;
metacyc_pathway_name superpathway of menaquinol-8 biosynthesis II;; lupulone and humulone biosynthesis;; superpathway of menaquinol-11 biosynthesis;; hyperforin and adhyperforin biosynthesis;; polyisoprenoid biosynthesis (E. coli);; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; demethylmenaquinol-8 biosynthesis II;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; xanthohumol biosynthesis;; cannabinoid biosynthesis;; shikonin biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-12 biosynthesis;; carrageenan biosynthesis;; dodecaprenyl diphosphate biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; wighteone and luteone biosynthesis;; chlorophyll a biosynthesis II;; tridecaprenyl diphosphate biosynthesis;; phylloquinol biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; PRENYLFLAVONOID-SYN;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Polysaccharides-Biosynthesis;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Chlorophyll-a-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Lipid-Biosynthesis;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF01053; PF01041;
pfam_desc Cys/Met metabolism PLP-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Cys_Met_Meta_PP; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF01053.20 evalue:1.8e-141 score:470.3 best_domain_score:470.1 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF01041.17 evalue:1.3e-06 score:27.2 best_domain_score:26.6 name:DegT_DnrJ_EryC1;
sprot_desc O-acetyl-L-homoserine sulfhydrylase;
sprot_id sp|P94890|METY_LEPME;
sprot_target db:uniprot_sprot|sp|P94890|METY_LEPME 10 430 evalue:4.7e-140 qcov:96.10 identity:58.60;
tigrfam_acc TIGR01326;
tigrfam_desc O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name OAH_OAS_sulfhy;
tigrfam_sub1role Serine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01326 evalue:1.1e-198 score:659.3 best_domain_score:659.1 name:TIGR01326;
7567 8796 CDS
ID metaerg.pl|05630
allec_ids 2.3.1.31;
allgo_ids GO:0005737; GO:0004414; GO:0009086;
allko_ids K00641;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Sphaerimonospora;s__Sphaerimonospora mesophila;
genomedb_acc GCA_001552515.1;
genomedb_target db:genomedb|GCA_001552515.1|BCRI01000021.1_50 23 404 evalue:3.7e-140 qcov:93.40 identity:64.80;
kegg_pathway_id 00920; 00271;
kegg_pathway_name Sulfur metabolism; Methionine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id PWY-6293; PWY-5344; PWY-821; PWY-5345;
metacyc_pathway_name superpathway of L-cysteine biosynthesis (fungi);; L-homocysteine biosynthesis;; superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae);; superpathway of L-methionine biosynthesis (by sulfhydrylation);;
metacyc_pathway_type CYSTEINE-SYN; Super-Pathways;; Other-Amino-Acid-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00561;
pfam_desc alpha/beta hydrolase fold;
pfam_id Abhydrolase_1;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:2.6e-23 score:82.2 best_domain_score:81.6 name:Abhydrolase_1;
sprot_desc Homoserine O-acetyltransferase;
sprot_id sp|Q47L17|METXA_THEFY;
sprot_target db:uniprot_sprot|sp|Q47L17|METXA_THEFY 29 405 evalue:1.4e-130 qcov:92.20 identity:59.80;
tigrfam_acc TIGR01392;
tigrfam_desc homoserine O-acetyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name homoserO_Ac_trn;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01392 evalue:4.1e-129 score:429.8 best_domain_score:429.6 name:TIGR01392;
9051 8824 CDS
ID metaerg.pl|05631
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 1;
9051 8824 transmembrane_helix
ID metaerg.pl|05632
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i8959-9027o;
9276 10055 CDS
ID metaerg.pl|05633
allgo_ids GO:0016746;
allko_ids K13512; K13510;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669073.1 4 245 evalue:2.2e-74 qcov:93.40 identity:58.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF01553;
pfam_desc Acyltransferase;
pfam_id Acyltransferase;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:2.1e-20 score:72.0 best_domain_score:71.0 name:Acyltransferase;
10411 10890 CDS
ID metaerg.pl|05634
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus sp900102115;
genomedb_acc GCA_900102115.1;
genomedb_target db:genomedb|GCA_900102115.1|SDF53879.1 14 153 evalue:3.3e-20 qcov:88.10 identity:43.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF13412; PF13463; PF01047; PF12802;
pfam_desc Winged helix-turn-helix DNA-binding; Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id HTH_24; HTH_27; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF13412.6 evalue:3.1e-05 score:22.7 best_domain_score:22.1 name:HTH_24; db:Pfam-A.hmm|PF13463.6 evalue:8.3e-07 score:28.7 best_domain_score:27.8 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:1.2e-10 score:40.4 best_domain_score:39.5 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:4.2e-12 score:45.0 best_domain_score:44.9 name:MarR_2;
12671 10878 CDS
ID metaerg.pl|05635
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0030425; GO:0005743; GO:0031966; GO:0005739; GO:0005634; GO:0000062; GO:0050660; GO:0004466; GO:0070991; GO:0017099; GO:0001676; GO:0051791; GO:0032981;
allko_ids K08098; K11538; K11731; K00249; K14448; K00120; K00232; K00252; K09478; K00253; K00248; K11410; K06446; K15980;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Thermocrispum;s__Thermocrispum municipale;
genomedb_acc GCF_000427825.1;
genomedb_target db:genomedb|GCF_000427825.1|WP_084612461.1 22 595 evalue:7.1e-193 qcov:96.10 identity:60.10;
kegg_pathway_id 00903; 01040; 00592; 00640; 00650; 00632; 00380; 00361; 00071; 00410; 00626; 00310; 00624; 01031; 00280; 00930;
kegg_pathway_name Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; alpha-Linolenic acid metabolism; Propanoate metabolism; Butanoate metabolism; Benzoate degradation via CoA ligation; Tryptophan metabolism; gamma-Hexachlorocyclohexane degradation; Fatty acid metabolism; beta-Alanine metabolism; Naphthalene and anthracene degradation; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Glycan structures - biosynthesis 2; Valine, leucine and isoleucine degradation; Caprolactam degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id PWY-6544; PWY-699; PWY-2582; CARNMET-PWY;
metacyc_pathway_name superpathway of C28 brassinosteroid biosynthesis;; brassinosteroid biosynthesis I;; brassinosteroid biosynthesis II;; L-carnitine degradation I;;
metacyc_pathway_type Super-Pathways;; Brassinosteroid-Biosynthesis;; Brassinosteroid-Biosynthesis;; CARN-DEG;;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:6.1e-38 score:129.6 best_domain_score:121.7 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:3.4e-13 score:49.3 best_domain_score:41.6 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:9.9e-19 score:66.6 best_domain_score:65.5 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:4.1e-26 score:91.1 best_domain_score:89.5 name:Acyl-CoA_dh_N;
sprot_desc Acyl-CoA dehydrogenase family member 9, mitochondrial;
sprot_id sp|Q9H845|ACAD9_HUMAN;
sprot_target db:uniprot_sprot|sp|Q9H845|ACAD9_HUMAN 33 582 evalue:2.9e-92 qcov:92.10 identity:36.70;
13045 12782 CDS
ID metaerg.pl|05636
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664946.1 5 87 evalue:2.4e-17 qcov:95.40 identity:64.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 1;
13045 12782 transmembrane_helix
ID metaerg.pl|05637
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i12935-12985o;
13658 13146 CDS
ID metaerg.pl|05638
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF13473;
pfam_desc Cupredoxin-like domain;
pfam_id Cupredoxin_1;
pfam_target db:Pfam-A.hmm|PF13473.6 evalue:2.8e-08 score:33.1 best_domain_score:32.6 name:Cupredoxin_1;
sp YES;
13146 13211 lipoprotein_signal_peptide
ID metaerg.pl|05639
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
15887 13749 CDS
ID metaerg.pl|05640
allec_ids 3.1.31.-;
allgo_ids GO:0009166; GO:0016787; GO:0005618; GO:0005576; GO:0030288; GO:0008253; GO:0004519; GO:0046872; GO:0000166; GO:0008768;
allko_ids K01081; K01183; K08693; K11751; K01179; K06931; K01225; K01448; K08077; K01181; K01119;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora pacifica_F;
genomedb_acc GCF_000514815.1;
genomedb_target db:genomedb|GCF_000514815.1|WP_026322004.1 187 706 evalue:9.7e-88 qcov:73.00 identity:39.40;
kegg_pathway_id 00550; 00760; 00230; 00530; 00240; 00500;
kegg_pathway_name Peptidoglycan biosynthesis; Nicotinate and nicotinamide metabolism; Purine metabolism; Aminosugars metabolism; Pyrimidine metabolism; Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF02872; PF00149; PF00395;
pfam_desc 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase; S-layer homology domain;
pfam_id 5_nucleotid_C; Metallophos; SLH;
pfam_target db:Pfam-A.hmm|PF02872.18 evalue:4e-23 score:81.6 best_domain_score:80.4 name:5_nucleotid_C; db:Pfam-A.hmm|PF00149.28 evalue:9.2e-11 score:41.8 best_domain_score:41.1 name:Metallophos; db:Pfam-A.hmm|PF00395.20 evalue:1.1e-34 score:117.3 best_domain_score:48.0 name:SLH;
sp YES;
sprot_desc Endonuclease YhcR;
sprot_id sp|P54602|YHCR_BACSU;
sprot_target db:uniprot_sprot|sp|P54602|YHCR_BACSU 122 706 evalue:7.5e-63 qcov:82.20 identity:28.90;
13749 13784 signal_peptide
ID metaerg.pl|05641
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
16370 16295 tRNA
ID metaerg.pl|05642
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
name tRNA_Ile_gat;
17019 16459 CDS
ID metaerg.pl|05643
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664947.1 1 186 evalue:2.0e-32 qcov:100.00 identity:49.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF12089;
pfam_desc Transmembrane domain of unknown function (DUF3566);
pfam_id DUF3566;
pfam_target db:Pfam-A.hmm|PF12089.8 evalue:9.3e-21 score:73.6 best_domain_score:73.3 name:DUF3566;
tm_num 2;
17019 16459 transmembrane_helix
ID metaerg.pl|05644
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i16516-16584o16678-16746i;
19803 17047 CDS
ID metaerg.pl|05645
allec_ids 5.6.2.3; 5.99.1.3;
allgo_ids GO:0003677; GO:0003916; GO:0005524; GO:0005694; GO:0006265; GO:0005618; GO:0005737; GO:0009330; GO:0005886; GO:0016887; GO:0034335; GO:0003918; GO:0000287; GO:0006261; GO:0046677;
allko_ids K02469;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669410.1 74 917 evalue:0.0e+00 qcov:91.90 identity:80.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF03989; PF00521;
pfam_desc DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A;
pfam_id DNA_gyraseA_C; DNA_topoisoIV;
pfam_target db:Pfam-A.hmm|PF03989.13 evalue:8.8e-69 score:226.0 best_domain_score:46.9 name:DNA_gyraseA_C; db:Pfam-A.hmm|PF00521.20 evalue:6.4e-158 score:525.3 best_domain_score:525.0 name:DNA_topoisoIV;
sprot_desc DNA gyrase subunit A;
sprot_id sp|P9WG47|GYRA_MYCTU;
sprot_target db:uniprot_sprot|sp|P9WG47|GYRA_MYCTU 64 895 evalue:1.6e-243 qcov:90.60 identity:53.90;
tigrfam_acc TIGR01063;
tigrfam_desc DNA gyrase, A subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name gyrA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01063 evalue:0 score:1157.5 best_domain_score:1157.3 name:TIGR01063;
20186 19911 CDS
ID metaerg.pl|05646
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664950.1 1 91 evalue:2.3e-10 qcov:100.00 identity:52.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 2;
20186 19911 transmembrane_helix
ID metaerg.pl|05647
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i19929-19988o19998-20066i;
20536 20189 CDS
ID metaerg.pl|05648
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 2;
20536 20189 transmembrane_helix
ID metaerg.pl|05649
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i20270-20329o20372-20431i;
22646 20541 CDS
ID metaerg.pl|05650
allec_ids 5.6.2.3; 5.99.1.3;
allgo_ids GO:0003677; GO:0003918; GO:0005524; GO:0006265; GO:0005694; GO:0005737; GO:0034335; GO:0046872; GO:0006261;
allko_ids K02470;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664952.1 24 701 evalue:9.2e-301 qcov:96.70 identity:77.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00204; PF00986; PF02518; PF01751;
pfam_desc DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Toprim domain;
pfam_id DNA_gyraseB; DNA_gyraseB_C; HATPase_c; Toprim;
pfam_target db:Pfam-A.hmm|PF00204.25 evalue:2e-54 score:182.9 best_domain_score:181.7 name:DNA_gyraseB; db:Pfam-A.hmm|PF00986.21 evalue:2.6e-30 score:103.6 best_domain_score:102.7 name:DNA_gyraseB_C; db:Pfam-A.hmm|PF02518.26 evalue:8.8e-19 score:67.3 best_domain_score:66.5 name:HATPase_c; db:Pfam-A.hmm|PF01751.22 evalue:3.6e-15 score:55.3 best_domain_score:54.4 name:Toprim;
sprot_desc DNA gyrase subunit B;
sprot_id sp|A0QNE0|GYRB_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QNE0|GYRB_MYCS2 42 695 evalue:1.7e-208 qcov:93.30 identity:57.00;
tigrfam_acc TIGR01059;
tigrfam_desc DNA gyrase, B subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name gyrB;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01059 evalue:2.6e-270 score:897.5 best_domain_score:897.4 name:TIGR01059;
23895 22963 CDS
ID metaerg.pl|05651
allgo_ids GO:0003684; GO:0003906; GO:0006284; GO:0008270; GO:0016799;
allko_ids K10563; K05522;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664955.1 1 310 evalue:2.8e-140 qcov:100.00 identity:79.00;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF01149; PF06831; PF06827;
pfam_desc Formamidopyrimidine-DNA glycosylase N-terminal domain; Formamidopyrimidine-DNA glycosylase H2TH domain; Zinc finger found in FPG and IleRS;
pfam_id Fapy_DNA_glyco; H2TH; zf-FPG_IleRS;
pfam_target db:Pfam-A.hmm|PF01149.24 evalue:7.9e-11 score:41.8 best_domain_score:40.9 name:Fapy_DNA_glyco; db:Pfam-A.hmm|PF06831.14 evalue:4.4e-15 score:54.7 best_domain_score:54.0 name:H2TH; db:Pfam-A.hmm|PF06827.14 evalue:1.1e-08 score:34.0 best_domain_score:33.2 name:zf-FPG_IleRS;
24542 23943 CDS
ID metaerg.pl|05652
allgo_ids GO:0016209; GO:0016491; GO:0055114;
allko_ids K11065;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664956.1 9 197 evalue:1.7e-42 qcov:95.00 identity:50.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00578; PF08534; PF13098;
pfam_desc AhpC/TSA family; Redoxin; Thioredoxin-like domain;
pfam_id AhpC-TSA; Redoxin; Thioredoxin_2;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:4.5e-09 score:35.5 best_domain_score:35.1 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:2.5e-10 score:39.5 best_domain_score:39.1 name:Redoxin; db:Pfam-A.hmm|PF13098.6 evalue:1.3e-07 score:31.3 best_domain_score:29.3 name:Thioredoxin_2;
sp YES;
tm_num 1;
23943 24029 signal_peptide
ID metaerg.pl|05653
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
24542 23943 transmembrane_helix
ID metaerg.pl|05654
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i23946-24005o;
25193 24672 CDS
ID metaerg.pl|05655
allgo_ids GO:0015035; GO:0016020;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669411.1 41 173 evalue:9.0e-40 qcov:76.90 identity:63.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF02600;
pfam_desc Disulfide bond formation protein DsbB;
pfam_id DsbB;
pfam_target db:Pfam-A.hmm|PF02600.16 evalue:1.2e-11 score:44.5 best_domain_score:44.5 name:DsbB;
tm_num 4;
25193 24672 transmembrane_helix
ID metaerg.pl|05656
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i24696-24755o24798-24866i24966-25019o25092-25160i;
25810 25262 CDS
ID metaerg.pl|05657
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664957.1 12 171 evalue:1.0e-46 qcov:87.90 identity:61.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF05258;
pfam_desc Dna[CI] antecedent, DciA;
pfam_id DciA;
pfam_target db:Pfam-A.hmm|PF05258.12 evalue:3.4e-26 score:90.7 best_domain_score:90.1 name:DciA;
26982 25807 CDS
ID metaerg.pl|05658
allgo_ids GO:0005737; GO:0005524; GO:0003697; GO:0006281; GO:0006260; GO:0009432;
allko_ids K03629;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664958.1 1 383 evalue:9.2e-149 qcov:98.00 identity:73.00;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF13476; PF02463;
pfam_desc AAA domain; RecF/RecN/SMC N terminal domain;
pfam_id AAA_23; SMC_N;
pfam_target db:Pfam-A.hmm|PF13476.6 evalue:1.2e-11 score:44.8 best_domain_score:44.3 name:AAA_23; db:Pfam-A.hmm|PF02463.19 evalue:2.8e-15 score:55.6 best_domain_score:55.2 name:SMC_N;
sprot_desc DNA replication and repair protein RecF;
sprot_id sp|A4X0U0|RECF_SALTO;
sprot_target db:uniprot_sprot|sp|A4X0U0|RECF_SALTO 1 372 evalue:5.9e-86 qcov:95.10 identity:48.70;
tigrfam_acc TIGR00611;
tigrfam_desc DNA replication and repair protein RecF;
tigrfam_mainrole DNA metabolism;
tigrfam_name recf;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00611 evalue:8.2e-99 score:330.3 best_domain_score:330.1 name:TIGR00611;
28151 27039 CDS
ID metaerg.pl|05659
allec_ids 2.7.7.7;
allgo_ids GO:0003677; GO:0003887; GO:0006260; GO:0008408; GO:0009360; GO:0005737; GO:0006271;
allko_ids K02338;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441218.1 1 370 evalue:1.6e-158 qcov:100.00 identity:80.10;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00712; PF02767; PF02768;
pfam_desc DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; DNA polymerase III beta subunit, C-terminal domain;
pfam_id DNA_pol3_beta; DNA_pol3_beta_2; DNA_pol3_beta_3;
pfam_target db:Pfam-A.hmm|PF00712.19 evalue:1.3e-41 score:140.7 best_domain_score:97.3 name:DNA_pol3_beta; db:Pfam-A.hmm|PF02767.16 evalue:3.3e-36 score:123.3 best_domain_score:103.6 name:DNA_pol3_beta_2; db:Pfam-A.hmm|PF02768.15 evalue:5e-29 score:99.8 best_domain_score:97.8 name:DNA_pol3_beta_3;
sprot_desc Beta sliding clamp;
sprot_id sp|P27903|DPO3B_STRCO;
sprot_target db:uniprot_sprot|sp|P27903|DPO3B_STRCO 1 370 evalue:9.0e-60 qcov:100.00 identity:38.20;
tigrfam_acc TIGR00663;
tigrfam_desc DNA polymerase III, beta subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnan;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00663 evalue:3.7e-87 score:291.8 best_domain_score:291.6 name:TIGR00663;
30219 28576 CDS
ID metaerg.pl|05660
allgo_ids GO:0005524; GO:0005737; GO:0003688; GO:0006270; GO:0006275;
allko_ids K02313;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669414.1 21 545 evalue:1.4e-208 qcov:96.00 identity:73.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00004; PF00308; PF08299; PF01695;
pfam_desc ATPase family associated with various cellular activities (AAA); Bacterial dnaA protein; Bacterial dnaA protein helix-turn-helix; IstB-like ATP binding protein;
pfam_id AAA; Bac_DnaA; Bac_DnaA_C; IstB_IS21;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1.8e-06 score:27.7 best_domain_score:24.5 name:AAA; db:Pfam-A.hmm|PF00308.18 evalue:2.2e-100 score:334.2 best_domain_score:333.7 name:Bac_DnaA; db:Pfam-A.hmm|PF08299.11 evalue:3e-30 score:103.3 best_domain_score:102.4 name:Bac_DnaA_C; db:Pfam-A.hmm|PF01695.17 evalue:5.3e-12 score:45.1 best_domain_score:44.0 name:IstB_IS21;
sprot_desc Chromosomal replication initiator protein DnaA;
sprot_id sp|A6W3V4|DNAA_KINRD;
sprot_target db:uniprot_sprot|sp|A6W3V4|DNAA_KINRD 8 544 evalue:2.9e-139 qcov:98.20 identity:53.40;
tigrfam_acc TIGR00362;
tigrfam_desc chromosomal replication initiator protein DnaA;
tigrfam_mainrole DNA metabolism;
tigrfam_name DnaA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00362 evalue:8.6e-159 score:528.4 best_domain_score:527.4 name:TIGR00362;
31002 31361 CDS
ID metaerg.pl|05661
allec_ids 3.1.26.5;
allgo_ids GO:0000049; GO:0004526; GO:0008033; GO:0001682;
allko_ids K03536;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441219.1 4 118 evalue:1.3e-24 qcov:96.60 identity:59.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id PWY0-1479;
metacyc_pathway_name tRNA processing;;
metacyc_pathway_type Nucleic-Acid-Processing;;
pfam_acc PF00825;
pfam_desc Ribonuclease P;
pfam_id Ribonuclease_P;
pfam_target db:Pfam-A.hmm|PF00825.18 evalue:8.3e-17 score:60.5 best_domain_score:60.2 name:Ribonuclease_P;
sprot_desc Ribonuclease P protein component;
sprot_id sp|Q5WAG0|RNPA_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WAG0|RNPA_BACSK 8 113 evalue:4.9e-07 qcov:89.10 identity:35.20;
tigrfam_acc TIGR00188;
tigrfam_desc ribonuclease P protein component;
tigrfam_mainrole Transcription;
tigrfam_name rnpA;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR00188 evalue:5.3e-11 score:41.9 best_domain_score:41.8 name:TIGR00188;
31682 33019 CDS
ID metaerg.pl|05662
allgo_ids GO:0016021; GO:0032977;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664961.1 3 443 evalue:5.1e-87 qcov:99.10 identity:51.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF02096;
pfam_desc 60Kd inner membrane protein;
pfam_id 60KD_IMP;
pfam_target db:Pfam-A.hmm|PF02096.20 evalue:8.2e-56 score:187.7 best_domain_score:186.5 name:60KD_IMP;
tigrfam_acc TIGR03592;
tigrfam_desc membrane protein insertase, YidC/Oxa1 family;
tigrfam_mainrole Protein fate;
tigrfam_name yidC_oxa1_cterm;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR03592 evalue:2.3e-60 score:203.1 best_domain_score:202.3 name:TIGR03592;
tm_num 4;
31682 33019 transmembrane_helix
ID metaerg.pl|05663
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology o31760-31828i32012-32080o32183-32236i32312-32380o;
33041 33820 CDS
ID metaerg.pl|05664
allgo_ids GO:0003676;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664962.1 1 257 evalue:9.3e-73 qcov:99.20 identity:63.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF13083; PF01424;
pfam_desc KH domain; R3H domain;
pfam_id KH_4; R3H;
pfam_target db:Pfam-A.hmm|PF13083.6 evalue:5.2e-10 score:38.3 best_domain_score:36.8 name:KH_4; db:Pfam-A.hmm|PF01424.22 evalue:2.1e-13 score:49.2 best_domain_score:48.3 name:R3H;
35538 36032 CDS
ID metaerg.pl|05665
allec_ids 2.1.1.-; 2.1.1.170;
allgo_ids GO:0005737; GO:0006364; GO:0008649; GO:0070043;
allko_ids K03501;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664964.1 1 162 evalue:3.0e-53 qcov:98.80 identity:68.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id CODH-PWY; PWY-6575; PWY-6442; PWY-5467; PWY-6477; PWY-3542; ALL-CHORISMATE-PWY; PWY-6153; PWY-5041; PWY-4021; PWY-5975; PWY-5864; PWY-5876; PWY-1061; PWY-1422; PWY-5305; PWYG-321; PWY-5729; PWY-6113; PWY-6303; PWY-5857; PWY-6151; PWY-5209; PWY-5855; PWY-5856; PWY-6424; PWY-6154; UBISYN-PWY; PWY-6142; METH-ACETATE-PWY; PWY-5328; METHIONINE-DEG1-PWY; PWY-6519; PWY-5773; PWY-5116; PWY-1581; CO2FORM-PWY; PWY-5987; PWY-5479; PWY-6292; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-6427; PWY-6395; PWY-6146;
metacyc_pathway_name reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; gramine biosynthesis;; gibberellin inactivation II (methylation);; choline biosynthesis II;; superpathway of chorismate metabolism;; autoinducer AI-2 biosynthesis I;; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; magnoflorine biosynthesis;; homogalacturonan biosynthesis;; vitamin E biosynthesis (tocopherols);; bixin biosynthesis;; mycolate biosynthesis;; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; S-adenosyl-L-methionine cycle I;; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; ubiquinol-9 biosynthesis (prokaryotic);; ; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; methanogenesis from acetate;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; biotin biosynthesis I;; xanthohumol biosynthesis;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Choline-Biosynthesis;; Super-Pathways;; Autoinducer-Biosynthesis;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; ; Autoinducer-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; METHANOGENESIS;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; QUINONE-SYN;; LIGNAN-SYN;; CYSTEINE-SYN; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;;
pfam_acc PF02527; PF13847; PF05175;
pfam_desc rRNA small subunit methyltransferase G; Methyltransferase domain; Methyltransferase small domain;
pfam_id GidB; Methyltransf_31; MTS;
pfam_target db:Pfam-A.hmm|PF02527.15 evalue:4.5e-32 score:110.1 best_domain_score:109.9 name:GidB; db:Pfam-A.hmm|PF13847.6 evalue:3.3e-07 score:29.5 best_domain_score:29.2 name:Methyltransf_31; db:Pfam-A.hmm|PF05175.14 evalue:2.5e-05 score:23.1 best_domain_score:22.2 name:MTS;
sprot_desc Ribosomal RNA small subunit methyltransferase G;
sprot_id sp|A4T4S9|RSMG_MYCGI;
sprot_target db:uniprot_sprot|sp|A4T4S9|RSMG_MYCGI 4 147 evalue:2.3e-23 qcov:87.80 identity:41.60;
tigrfam_acc TIGR00138;
tigrfam_desc 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;
tigrfam_mainrole Protein synthesis;
tigrfam_name rsmG_gidB;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00138 evalue:2.2e-30 score:104.9 best_domain_score:104.6 name:TIGR00138;
36145 37161 CDS
ID metaerg.pl|05666
allec_ids 3.6.-.-;
allgo_ids GO:0005524; GO:0016491; GO:0055114; GO:0016787; GO:0042174; GO:0030435;
allko_ids K03496;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442083.1 16 315 evalue:2.5e-110 qcov:88.80 identity:71.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF13614; PF02374; PF01656; PF06564; PF00142; PF09140; PF10609;
pfam_desc AAA domain; Anion-transporting ATPase; CobQ/CobB/MinD/ParA nucleotide binding domain; Cellulose biosynthesis protein BcsQ; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; ATPase MipZ; NUBPL iron-transfer P-loop NTPase;
pfam_id AAA_31; ArsA_ATPase; CbiA; CBP_BcsQ; Fer4_NifH; MipZ; ParA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:6.7e-61 score:204.5 best_domain_score:204.1 name:AAA_31; db:Pfam-A.hmm|PF02374.15 evalue:1e-08 score:34.0 best_domain_score:30.4 name:ArsA_ATPase; db:Pfam-A.hmm|PF01656.23 evalue:8.5e-29 score:99.4 best_domain_score:98.4 name:CbiA; db:Pfam-A.hmm|PF06564.12 evalue:6.5e-12 score:44.7 best_domain_score:43.3 name:CBP_BcsQ; db:Pfam-A.hmm|PF00142.18 evalue:4.8e-09 score:35.3 best_domain_score:21.8 name:Fer4_NifH; db:Pfam-A.hmm|PF09140.11 evalue:1.1e-13 score:50.3 best_domain_score:32.7 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:1e-09 score:37.4 best_domain_score:32.8 name:ParA;
sprot_desc Sporulation initiation inhibitor protein Soj;
sprot_id sp|P37522|SOJ_BACSU;
sprot_target db:uniprot_sprot|sp|P37522|SOJ_BACSU 27 272 evalue:5.5e-80 qcov:72.80 identity:59.30;
37158 38459 CDS
ID metaerg.pl|05667
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442084.1 114 427 evalue:4.2e-94 qcov:72.50 identity:63.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF17762; PF02195;
pfam_desc HTH domain found in ParB protein; ParB-like nuclease domain;
pfam_id HTH_ParB; ParBc;
pfam_target db:Pfam-A.hmm|PF17762.1 evalue:3.2e-17 score:61.3 best_domain_score:60.0 name:HTH_ParB; db:Pfam-A.hmm|PF02195.18 evalue:1.9e-24 score:85.0 best_domain_score:83.7 name:ParBc;
sp YES;
tigrfam_acc TIGR00180;
tigrfam_desc ParB/RepB/Spo0J family partition protein;
tigrfam_name parB_part;
tigrfam_target db:TIGRFAMs.hmm|TIGR00180 evalue:5.2e-56 score:188.5 best_domain_score:188.0 name:TIGR00180;
37158 37238 signal_peptide
ID metaerg.pl|05668
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
39162 38485 CDS
ID metaerg.pl|05669
allec_ids 5.3.1.6;
allgo_ids GO:0004751; GO:0009052;
allko_ids K01807;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664965.1 1 222 evalue:3.0e-67 qcov:98.70 identity:64.90;
kegg_pathway_id 00030; 00710;
kegg_pathway_name Pentose phosphate pathway; Carbon fixation in photosynthetic organisms;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id PWY-5723; PHOTOALL-PWY; PWY-1861; P124-PWY; NONOXIPENT-PWY; P185-PWY; PENTOSE-P-PWY; CALVIN-PWY;
metacyc_pathway_name Rubisco shunt;; oxygenic photosynthesis;; formaldehyde assimilation II (assimilatory RuMP Cycle);; Bifidobacterium shunt;; pentose phosphate pathway (non-oxidative branch);; formaldehyde assimilation III (dihydroxyacetone cycle);; pentose phosphate pathway;; Calvin-Benson-Bassham cycle;;
metacyc_pathway_type Energy-Metabolism;; Photosynthesis; Super-Pathways;; Formaldehyde-Assimilation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Pentose-Phosphate-Cycle;; Formaldehyde-Assimilation;; Pentose-Phosphate-Cycle; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;;
pfam_acc PF06026;
pfam_desc Ribose 5-phosphate isomerase A (phosphoriboisomerase A);
pfam_id Rib_5-P_isom_A;
pfam_target db:Pfam-A.hmm|PF06026.14 evalue:1.3e-56 score:190.2 best_domain_score:190.0 name:Rib_5-P_isom_A;
sprot_desc Ribose-5-phosphate isomerase A;
sprot_id sp|A9W537|RPIA_METEP;
sprot_target db:uniprot_sprot|sp|A9W537|RPIA_METEP 6 218 evalue:5.5e-44 qcov:94.70 identity:49.50;
tigrfam_acc TIGR00021;
tigrfam_desc ribose 5-phosphate isomerase A;
tigrfam_mainrole Energy metabolism;
tigrfam_name rpiA;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00021 evalue:8.6e-68 score:227.1 best_domain_score:226.9 name:TIGR00021;
39432 40772 CDS
ID metaerg.pl|05670
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
sp YES;
tm_num 1;
39432 39485 lipoprotein_signal_peptide
ID metaerg.pl|05671
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
39432 40772 transmembrane_helix
ID metaerg.pl|05672
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i39450-39509o;
41574 40801 CDS
ID metaerg.pl|05673
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442085.1 33 253 evalue:8.6e-95 qcov:86.00 identity:76.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF13419; PF00702; PF13242;
pfam_desc Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD_2; Hydrolase; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:4.9e-10 score:39.0 best_domain_score:38.7 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:3.3e-14 score:52.9 best_domain_score:49.3 name:Hydrolase; db:Pfam-A.hmm|PF13242.6 evalue:1.1e-08 score:34.3 best_domain_score:33.2 name:Hydrolase_like;
tigrfam_acc TIGR01509; TIGR01549;
tigrfam_desc HAD hydrolase, family IA, variant 3; HAD hydrolase, family IA, variant 1;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name HAD-SF-IA-v3; HAD-SF-IA-v1;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:2.9e-07 score:30.0 best_domain_score:27.1 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01549 evalue:1.1e-06 score:28.3 best_domain_score:26.6 name:TIGR01549;
42530 41571 CDS
ID metaerg.pl|05674
allec_ids 6.3.2.4;
allgo_ids GO:0005524; GO:0005737; GO:0008716; GO:0046872; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01921;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664967.1 11 317 evalue:2.1e-122 qcov:96.20 identity:77.20;
kegg_pathway_id 00473; 00550;
kegg_pathway_name D-Alanine metabolism; Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id PWY-6385; PWY-5265; PWY-6387; PWY-6386; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6470;
metacyc_pathway_name peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF02222; PF02786; PF07478; PF01820;
pfam_desc ATP-grasp domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus;
pfam_id ATP-grasp; CPSase_L_D2; Dala_Dala_lig_C; Dala_Dala_lig_N;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:3.9e-05 score:22.5 best_domain_score:21.6 name:ATP-grasp; db:Pfam-A.hmm|PF02786.17 evalue:2.5e-05 score:23.1 best_domain_score:22.2 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:9.9e-48 score:161.6 best_domain_score:161.3 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF01820.21 evalue:3.4e-18 score:65.2 best_domain_score:61.1 name:Dala_Dala_lig_N;
sprot_desc D-alanine--D-alanine ligase;
sprot_id sp|B8J8F1|DDL_ANAD2;
sprot_target db:uniprot_sprot|sp|B8J8F1|DDL_ANAD2 1 314 evalue:3.2e-61 qcov:98.40 identity:45.30;
tigrfam_acc TIGR01205;
tigrfam_desc D-alanine--D-alanine ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name D_ala_D_alaTIGR;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01205 evalue:1e-78 score:263.7 best_domain_score:263.5 name:TIGR01205;
43913 42621 CDS
ID metaerg.pl|05675
allec_ids 2.6.1.57;
allgo_ids GO:0009058; GO:0030170; GO:0080130;
allko_ids K00825; K00835; K05825;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442086.1 1 418 evalue:7.1e-195 qcov:97.20 identity:78.80;
kegg_pathway_id 00300; 00310; 00290;
kegg_pathway_name Lysine biosynthesis; Lysine degradation; Valine, leucine and isoleucine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id BENZCOA-PWY; PHESYN; PWY3O-4108; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY; PWY-5079; TYRSYN;
metacyc_pathway_name anaerobic aromatic compound degradation (Thauera aromatica);; L-phenylalanine biosynthesis I;; L-tyrosine degradation III;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;; L-phenylalanine degradation III;; L-tyrosine biosynthesis I;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; PHENYLALANINE-SYN;; TYROSINE-DEG;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; PHENYLALANINE-DEG;; TYROSINE-SYN;;
pfam_acc PF00155; PF12897;
pfam_desc Aminotransferase class I and II; Alanine-glyoxylate amino-transferase;
pfam_id Aminotran_1_2; Aminotran_MocR;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1.1e-34 score:119.5 best_domain_score:119.3 name:Aminotran_1_2; db:Pfam-A.hmm|PF12897.7 evalue:1.9e-08 score:32.7 best_domain_score:32.0 name:Aminotran_MocR;
sprot_desc Aromatic-amino-acid aminotransferase 1;
sprot_id sp|H3ZPL1|ARAT1_THELN;
sprot_target db:uniprot_sprot|sp|H3ZPL1|ARAT1_THELN 8 404 evalue:7.2e-85 qcov:92.30 identity:38.30;
44100 44357 CDS
ID metaerg.pl|05676
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 1;
44100 44357 transmembrane_helix
ID metaerg.pl|05677
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology o44181-44240i;
44361 45065 CDS
ID metaerg.pl|05678
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664970.1 1 229 evalue:1.7e-81 qcov:97.90 identity:65.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00583;
pfam_desc Acetyltransferase (GNAT) family;
pfam_id Acetyltransf_1;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:8.3e-05 score:22.0 best_domain_score:21.4 name:Acetyltransf_1;
46160 45081 CDS
ID metaerg.pl|05679
allec_ids 3.5.1.28;
allgo_ids GO:0008745; GO:0009253; GO:0042597; GO:0016998; GO:0071555;
allko_ids K01185; K01448; K08307; K11066; K01447; K01449;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664972.1 1 353 evalue:1.2e-139 qcov:98.30 identity:69.50;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF01520; PF01471; PF08823; PF09374;
pfam_desc N-acetylmuramoyl-L-alanine amidase; Putative peptidoglycan binding domain; Putative peptidoglycan binding domain; Predicted Peptidoglycan domain;
pfam_id Amidase_3; PG_binding_1; PG_binding_2; PG_binding_3;
pfam_target db:Pfam-A.hmm|PF01520.18 evalue:7.7e-36 score:123.1 best_domain_score:122.4 name:Amidase_3; db:Pfam-A.hmm|PF01471.18 evalue:2.1e-34 score:116.7 best_domain_score:58.4 name:PG_binding_1; db:Pfam-A.hmm|PF08823.11 evalue:0.00018 score:21.0 best_domain_score:11.3 name:PG_binding_2; db:Pfam-A.hmm|PF09374.10 evalue:2.3e-07 score:30.2 best_domain_score:12.8 name:PG_binding_3;
sprot_desc N-acetylmuramoyl-L-alanine amidase CwlM;
sprot_id sp|L7N653|CWLM_MYCTU;
sprot_target db:uniprot_sprot|sp|L7N653|CWLM_MYCTU 2 347 evalue:4.8e-50 qcov:96.40 identity:36.20;
46576 46253 CDS
ID metaerg.pl|05680
allgo_ids GO:0045454; GO:0005623; GO:0015035; GO:0006662;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664976.1 1 105 evalue:7.8e-42 qcov:98.10 identity:77.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00085; PF13098; PF13905;
pfam_desc Thioredoxin; Thioredoxin-like domain; Thioredoxin-like;
pfam_id Thioredoxin; Thioredoxin_2; Thioredoxin_8;
pfam_target db:Pfam-A.hmm|PF00085.20 evalue:4e-30 score:103.1 best_domain_score:103.0 name:Thioredoxin; db:Pfam-A.hmm|PF13098.6 evalue:6.6e-08 score:32.2 best_domain_score:29.0 name:Thioredoxin_2; db:Pfam-A.hmm|PF13905.6 evalue:5e-10 score:38.8 best_domain_score:28.6 name:Thioredoxin_8;
sprot_desc Thioredoxin;
sprot_id sp|P0A617|THIO_MYCBO;
sprot_target db:uniprot_sprot|sp|P0A617|THIO_MYCBO 6 104 evalue:1.0e-32 qcov:92.50 identity:66.70;
tigrfam_acc TIGR01068;
tigrfam_desc thioredoxin;
tigrfam_mainrole Energy metabolism;
tigrfam_name thioredoxin;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01068 evalue:1.2e-37 score:127.2 best_domain_score:127.1 name:TIGR01068;
47754 46723 CDS
ID metaerg.pl|05681
allec_ids 1.8.1.9;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0004791; GO:0019430;
allko_ids K00302; K03885; K00266; K01008; K00382; K00383; K03388; K00384; K00264;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441221.1 13 334 evalue:2.2e-138 qcov:93.90 identity:75.20;
kegg_pathway_id 00190; 00790; 00252; 00251; 00620; 00910; 00450; 00020; 00240; 00260; 00480; 00280; 00010;
kegg_pathway_name Oxidative phosphorylation; Folate biosynthesis; Alanine and aspartate metabolism; Glutamate metabolism; Pyruvate metabolism; Nitrogen metabolism; Selenoamino acid metabolism; Citrate cycle (TCA cycle); Pyrimidine metabolism; Glycine, serine and threonine metabolism; Glutathione metabolism; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id THIOREDOX-PWY;
metacyc_pathway_name thioredoxin pathway;;
metacyc_pathway_type Reductants;;
pfam_acc PF00890; PF03486; PF13434; PF13241; PF00070; PF07992; PF13738; PF01946;
pfam_desc FAD binding domain; HI0933-like protein; L-lysine 6-monooxygenase (NADPH-requiring); Putative NAD(P)-binding; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Thi4 family;
pfam_id FAD_binding_2; HI0933_like; K_oxygenase; NAD_binding_7; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Thi4;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:4.8e-11 score:41.6 best_domain_score:23.8 name:FAD_binding_2; db:Pfam-A.hmm|PF03486.14 evalue:3.9e-08 score:31.6 best_domain_score:19.0 name:HI0933_like; db:Pfam-A.hmm|PF13434.6 evalue:9.7e-08 score:30.7 best_domain_score:13.1 name:K_oxygenase; db:Pfam-A.hmm|PF13241.6 evalue:8.1e-08 score:31.9 best_domain_score:26.0 name:NAD_binding_7; db:Pfam-A.hmm|PF00070.27 evalue:2e-21 score:75.5 best_domain_score:69.0 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.5e-57 score:194.3 best_domain_score:194.0 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:4.9e-28 score:97.5 best_domain_score:79.2 name:Pyr_redox_3; db:Pfam-A.hmm|PF01946.17 evalue:1.2e-08 score:33.8 best_domain_score:26.8 name:Thi4;
sprot_desc Thioredoxin reductase;
sprot_id sp|Q05741|TRXB_STRC2;
sprot_target db:uniprot_sprot|sp|Q05741|TRXB_STRC2 19 339 evalue:3.6e-95 qcov:93.60 identity:56.70;
tigrfam_acc TIGR01292;
tigrfam_desc thioredoxin-disulfide reductase;
tigrfam_mainrole Energy metabolism;
tigrfam_name TRX_reduct;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01292 evalue:1.4e-119 score:397.5 best_domain_score:397.3 name:TIGR01292;
47989 48687 CDS
ID metaerg.pl|05682
allgo_ids GO:0008270;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664978.1 6 232 evalue:3.4e-42 qcov:97.80 identity:49.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00643;
pfam_desc B-box zinc finger;
pfam_id zf-B_box;
pfam_target db:Pfam-A.hmm|PF00643.24 evalue:7.8e-07 score:28.4 best_domain_score:28.4 name:zf-B_box;
tm_num 4;
47989 48687 transmembrane_helix
ID metaerg.pl|05683
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i48370-48438o48448-48507i48526-48594o48622-48675i;
49868 48705 CDS
ID metaerg.pl|05684
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664979.1 1 377 evalue:4.1e-24 qcov:97.40 identity:36.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 1;
49868 48705 transmembrane_helix
ID metaerg.pl|05685
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i49065-49133o;
50656 49982 CDS
ID metaerg.pl|05686
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0000345; GO:0032993; GO:0001216; GO:0016987; GO:0000976; GO:0042121; GO:0071236; GO:0036460; GO:1902201; GO:0009405; GO:1900189; GO:1900036; GO:1902884; GO:1900233; GO:0045893; GO:0032885;
allko_ids K03088;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442087.1 10 222 evalue:1.2e-49 qcov:95.10 identity:59.30;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF04542; PF04545; PF08281;
pfam_desc Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF04542.14 evalue:1.3e-19 score:68.9 best_domain_score:68.2 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:3.4e-09 score:35.3 best_domain_score:34.4 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:3.7e-16 score:57.8 best_domain_score:57.8 name:Sigma70_r4_2;
sprot_desc RNA polymerase sigma-H factor;
sprot_id sp|Q06198|RPSH_PSEAE;
sprot_target db:uniprot_sprot|sp|Q06198|RPSH_PSEAE 28 190 evalue:4.7e-11 qcov:72.80 identity:30.80;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:1.1e-27 score:95.9 best_domain_score:95.6 name:TIGR02937;
52388 50664 CDS
ID metaerg.pl|05687
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K08860; K05103; K08855; K08856; K08282; K05102; K08333; K08897; K11228; K08854; K08790; K11912; K08846; K05744; K04444; K05105; K08848; K11889; K06633; K11623; K06641; K04442; K05111; K12318; K12319; K12324; K08884; K08810; K06103; K05113; K07778; K07683; K02831; K11265; K07673; K03407; K00924; K13302; K05743; K04424; K07682; K02178; K07675; K08841; K13304; K05121; K05688; K13303; K12323; K08853; K12767; K13414; K02486; K04688; K04372; K03114; K04367; K12321; K04443; K01728; K08847; K01769; K08864; K05096; K07678; K12320; K05097; K04445; K02482; K05091; K02480; K08286; K06632; K01768; K08850; K08805; K04420; K04421; K05098; K05112; K04373; K08792; K08809;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664981.1 3 573 evalue:3.0e-172 qcov:99.50 identity:61.10;
kegg_pathway_id 00040; 04150; 04115; 05012; 04110; 04011; 04010; 02020; 04510; 00230; 04640; 04111; 04530; 04140; 04360;
kegg_pathway_name Pentose and glucuronate interconversions; mTOR signaling pathway; p53 signaling pathway; Parkinson's disease; Cell cycle; MAPK signaling pathway - yeast; MAPK signaling pathway; Two-component system - General; Focal adhesion; Purine metabolism; Hematopoietic cell lineage; Cell cycle - yeast; Tight junction; Regulation of autophagy; Axon guidance;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00069; PF07714;
pfam_desc Protein kinase domain; Protein tyrosine kinase;
pfam_id Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF00069.25 evalue:2.3e-46 score:157.6 best_domain_score:157.2 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:6.6e-32 score:110.0 best_domain_score:109.7 name:Pkinase_Tyr;
tm_num 1;
52388 50664 transmembrane_helix
ID metaerg.pl|05688
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i51828-51896o;
52810 52397 CDS
ID metaerg.pl|05689
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664982.1 15 132 evalue:6.1e-23 qcov:86.10 identity:51.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 1;
52810 52397 transmembrane_helix
ID metaerg.pl|05690
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i52457-52525o;
55201 52901 CDS
ID metaerg.pl|05691
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664983.1 66 726 evalue:7.1e-145 qcov:86.30 identity:47.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
sp YES;
tm_num 2;
52901 53023 signal_peptide
ID metaerg.pl|05692
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
55201 52901 transmembrane_helix
ID metaerg.pl|05693
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i52937-53005o54995-55063i;
55686 55198 CDS
ID metaerg.pl|05694
allgo_ids GO:0016787;
allko_ids K03574; K01518; K08310;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442088.1 1 162 evalue:4.5e-73 qcov:100.00 identity:81.80;
kegg_pathway_id 00230; 00240;
kegg_pathway_name Purine metabolism; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:1.8e-22 score:79.0 best_domain_score:78.8 name:NUDIX;
55813 56268 CDS
ID metaerg.pl|05695
allec_ids 3.1.1.96; 3.6.1.-;
allgo_ids GO:0002161; GO:0005737; GO:0051499; GO:0106026; GO:0043908; GO:0000049; GO:0019478;
allko_ids K07560;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664984.1 1 151 evalue:9.9e-51 qcov:100.00 identity:70.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id PWY-6404; PWY-5354; PWY-6147; PWY-6502; ALL-CHORISMATE-PWY; FOLSYN-PWY; PWY-6383;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; oxidized GTP and dGTP detoxification;; superpathway of chorismate metabolism;; superpathway of tetrahydrofolate biosynthesis and salvage;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; ; 6-HM-Dihydropterin-PP-Biosynthesis;; Detoxification; Metabolic-Clusters;; Super-Pathways;; Folate-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;;
pfam_acc PF02580;
pfam_desc D-Tyr-tRNA(Tyr) deacylase;
pfam_id Tyr_Deacylase;
pfam_target db:Pfam-A.hmm|PF02580.16 evalue:8.6e-52 score:174.7 best_domain_score:174.6 name:Tyr_Deacylase;
sprot_desc D-aminoacyl-tRNA deacylase;
sprot_id sp|B0TF85|DTD_HELMI;
sprot_target db:uniprot_sprot|sp|B0TF85|DTD_HELMI 1 150 evalue:2.3e-38 qcov:99.30 identity:56.70;
tigrfam_acc TIGR00256;
tigrfam_desc D-tyrosyl-tRNA(Tyr) deacylase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00256;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00256 evalue:1.8e-45 score:154.2 best_domain_score:154.0 name:TIGR00256;
56340 57485 CDS
ID metaerg.pl|05696
allgo_ids GO:0003677; GO:0005524; GO:0016787; GO:0005737; GO:0044096; GO:0016887; GO:0043108; GO:0043107;
allko_ids K02669;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664985.1 24 381 evalue:7.3e-167 qcov:94.00 identity:82.20;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF03029; PF04851; PF00437;
pfam_desc Conserved hypothetical ATP binding protein; Type III restriction enzyme, res subunit; Type II/IV secretion system protein;
pfam_id ATP_bind_1; ResIII; T2SSE;
pfam_target db:Pfam-A.hmm|PF03029.17 evalue:0.00014 score:20.9 best_domain_score:20.2 name:ATP_bind_1; db:Pfam-A.hmm|PF04851.15 evalue:2.1e-05 score:23.8 best_domain_score:23.2 name:ResIII; db:Pfam-A.hmm|PF00437.20 evalue:3.7e-40 score:136.9 best_domain_score:136.6 name:T2SSE;
sprot_desc Twitching mobility protein;
sprot_id sp|P24559|PILT_PSEAE;
sprot_target db:uniprot_sprot|sp|P24559|PILT_PSEAE 23 369 evalue:3.4e-70 qcov:91.10 identity:41.20;
tigrfam_acc TIGR01420;
tigrfam_desc twitching motility protein;
tigrfam_mainrole Cellular processes;
tigrfam_name pilT_fam;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR01420 evalue:2e-132 score:440.8 best_domain_score:440.6 name:TIGR01420;
59123 57543 CDS
ID metaerg.pl|05697
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441222.1 2 512 evalue:9.6e-117 qcov:97.10 identity:51.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF03703;
pfam_desc Bacterial PH domain;
pfam_id bPH_2;
pfam_target db:Pfam-A.hmm|PF03703.14 evalue:1.5e-41 score:139.7 best_domain_score:52.8 name:bPH_2;
tm_num 5;
59123 57543 transmembrane_helix
ID metaerg.pl|05698
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i57591-57659o57672-57740i58083-58151o58245-58313i58650-58718o;
59703 59245 CDS
ID metaerg.pl|05699
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664987.1 1 152 evalue:3.5e-35 qcov:100.00 identity:56.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF03703;
pfam_desc Bacterial PH domain;
pfam_id bPH_2;
pfam_target db:Pfam-A.hmm|PF03703.14 evalue:5.2e-18 score:64.3 best_domain_score:63.9 name:bPH_2;
tm_num 2;
59703 59245 transmembrane_helix
ID metaerg.pl|05700
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i59257-59325o59335-59403i;
60091 61569 CDS
ID metaerg.pl|05701
allec_ids 2.7.7.-; 2.7.7.72;
allgo_ids GO:0003723; GO:0006396; GO:0016779; GO:0005524; GO:0052929; GO:0052928; GO:0052927;
allko_ids K00970; K00974;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664990.1 11 484 evalue:1.5e-212 qcov:96.30 identity:77.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id PWY-6476; PWY4FS-4; PHOSLIPSYN2-PWY; THISYN-PWY; PWY-882; PWY-5354;
metacyc_pathway_name cytidylyl molybdenum cofactor biosynthesis;; phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; superpathway of thiamine diphosphate biosynthesis I;; L-ascorbate biosynthesis I (L-galactose pathway);; ;
metacyc_pathway_type Cofactor-Biosynthesis;; PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Super-Pathways; Thiamine-Biosynthesis;; Ascorbate-Biosynthesis;; ;
pfam_acc PF01966; PF01743; PF12627; PF13735;
pfam_desc HD domain; Poly A polymerase head domain; Probable RNA and SrmB- binding site of polymerase A; tRNA nucleotidyltransferase domain 2 putative;
pfam_id HD; PolyA_pol; PolyA_pol_RNAbd; tRNA_NucTran2_2;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:3.2e-11 score:42.8 best_domain_score:41.8 name:HD; db:Pfam-A.hmm|PF01743.20 evalue:9e-28 score:96.5 best_domain_score:95.0 name:PolyA_pol; db:Pfam-A.hmm|PF12627.7 evalue:3.9e-13 score:48.2 best_domain_score:47.2 name:PolyA_pol_RNAbd; db:Pfam-A.hmm|PF13735.6 evalue:9.5e-08 score:31.4 best_domain_score:30.8 name:tRNA_NucTran2_2;
sprot_desc A-adding tRNA nucleotidyltransferase;
sprot_id sp|Q9RV39|AATNT_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RV39|AATNT_DEIRA 126 481 evalue:1.6e-35 qcov:72.40 identity:35.60;
tigrfam_acc TIGR00277; TIGR02692;
tigrfam_desc HDIG domain; CCA tRNA nucleotidyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name HDIG; tRNA_CCA_actino;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00277 evalue:2.3e-11 score:42.6 best_domain_score:41.7 name:TIGR00277; db:TIGRFAMs.hmm|TIGR02692 evalue:1e-186 score:620.3 best_domain_score:620.0 name:TIGR02692;
62115 61738 CDS
ID metaerg.pl|05702
allec_ids 3.4.21.89;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441224.1 3 120 evalue:3.3e-31 qcov:94.40 identity:64.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00717;
pfam_desc Peptidase S24-like;
pfam_id Peptidase_S24;
pfam_target db:Pfam-A.hmm|PF00717.23 evalue:2.5e-11 score:42.6 best_domain_score:42.1 name:Peptidase_S24;
sp YES;
tigrfam_acc TIGR02227; TIGR02754;
tigrfam_desc signal peptidase I; nickel-type superoxide dismutase maturation protease;
tigrfam_mainrole Protein fate; Protein fate;
tigrfam_name sigpep_I_bact; sod_Ni_protease;
tigrfam_sub1role Protein and peptide secretion and trafficking; Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02227 evalue:5e-14 score:51.6 best_domain_score:42.6 name:TIGR02227; db:TIGRFAMs.hmm|TIGR02754 evalue:1.2e-18 score:66.5 best_domain_score:66.2 name:TIGR02754;
61738 61791 signal_peptide
ID metaerg.pl|05703
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
62271 62708 CDS
ID metaerg.pl|05704
allec_ids 1.15.1.1;
allgo_ids GO:0004784; GO:0016151; GO:0016209; GO:0005737;
allko_ids K00518;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669417.1 10 145 evalue:7.8e-69 qcov:93.80 identity:91.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id DETOX1-PWY;
metacyc_pathway_name superoxide radicals degradation;;
metacyc_pathway_type REACTIVE-OXYGEN-SPECIES-DEGRADATION;;
pfam_acc PF09055;
pfam_desc Nickel-containing superoxide dismutase;
pfam_id Sod_Ni;
pfam_target db:Pfam-A.hmm|PF09055.11 evalue:4.5e-43 score:146.1 best_domain_score:145.9 name:Sod_Ni;
sprot_desc Superoxide dismutase [Ni];
sprot_id sp|P80735|SODN_STRCO;
sprot_target db:uniprot_sprot|sp|P80735|SODN_STRCO 18 136 evalue:7.7e-31 qcov:82.10 identity:54.60;
tigrfam_acc TIGR02753;
tigrfam_desc superoxide dismutase, Ni;
tigrfam_name sodN;
tigrfam_target db:TIGRFAMs.hmm|TIGR02753 evalue:2.4e-42 score:143.7 best_domain_score:143.3 name:TIGR02753;
62749 63204 CDS
ID metaerg.pl|05705
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 4;
62749 63204 transmembrane_helix
ID metaerg.pl|05706
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i62806-62874o62902-62970i63007-63075o63088-63156i;
65514 63235 CDS
ID metaerg.pl|05707
allec_ids 3.4.21.26;
allgo_ids GO:0006508; GO:0008236; GO:0004252; GO:0070008;
allko_ids K01730;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441226.1 3 746 evalue:1.7e-244 qcov:98.00 identity:57.30;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00326; PF02897;
pfam_desc Prolyl oligopeptidase family; Prolyl oligopeptidase, N-terminal beta-propeller domain;
pfam_id Peptidase_S9; Peptidase_S9_N;
pfam_target db:Pfam-A.hmm|PF00326.21 evalue:6.1e-51 score:172.1 best_domain_score:170.6 name:Peptidase_S9; db:Pfam-A.hmm|PF02897.15 evalue:1.6e-89 score:299.8 best_domain_score:299.4 name:Peptidase_S9_N;
sprot_desc Prolyl endopeptidase;
sprot_id sp|Q06903|PPCE_AERHY;
sprot_target db:uniprot_sprot|sp|Q06903|PPCE_AERHY 20 741 evalue:1.9e-120 qcov:95.10 identity:38.90;
65717 66097 CDS
ID metaerg.pl|05708
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664996.1 1 123 evalue:6.4e-43 qcov:97.60 identity:68.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF17249;
pfam_desc Family of unknown function (DUF5318);
pfam_id DUF5318;
pfam_target db:Pfam-A.hmm|PF17249.2 evalue:2.7e-33 score:113.8 best_domain_score:113.7 name:DUF5318;
66684 66142 CDS
ID metaerg.pl|05709
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664997.1 3 180 evalue:9.4e-40 qcov:98.90 identity:49.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 1;
66684 66142 transmembrane_helix
ID metaerg.pl|05710
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology o66604-66672i;
67345 66740 CDS
ID metaerg.pl|05711
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF18042;
pfam_desc ORF 12 gene product N-terminal;
pfam_id ORF_12_N;
pfam_target db:Pfam-A.hmm|PF18042.1 evalue:3.1e-18 score:65.2 best_domain_score:64.4 name:ORF_12_N;
sp YES;
66740 66817 lipoprotein_signal_peptide
ID metaerg.pl|05712
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
67731 67423 CDS
ID metaerg.pl|05713
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
67987 67781 CDS
ID metaerg.pl|05714
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665000.1 2 68 evalue:7.5e-14 qcov:98.50 identity:55.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
68063 68287 CDS
ID metaerg.pl|05715
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441227.1 8 73 evalue:3.4e-20 qcov:89.20 identity:66.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF14237;
pfam_desc GYF domain 2;
pfam_id GYF_2;
pfam_target db:Pfam-A.hmm|PF14237.6 evalue:4.1e-20 score:70.6 best_domain_score:70.2 name:GYF_2;
68344 69654 CDS
ID metaerg.pl|05716
allec_ids 6.1.1.1;
allgo_ids GO:0003723; GO:0005829; GO:0005524; GO:0004831; GO:0043039; GO:0006437;
allko_ids K01866;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665004.1 1 433 evalue:1.0e-172 qcov:99.30 identity:71.30;
kegg_pathway_id 00400; 00970;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF01479; PF00579;
pfam_desc S4 domain; tRNA synthetases class I (W and Y);
pfam_id S4; tRNA-synt_1b;
pfam_target db:Pfam-A.hmm|PF01479.25 evalue:1.3e-08 score:33.7 best_domain_score:31.9 name:S4; db:Pfam-A.hmm|PF00579.25 evalue:3.1e-72 score:242.6 best_domain_score:242.2 name:tRNA-synt_1b;
sprot_desc Tyrosine--tRNA ligase;
sprot_id sp|Q7UM14|SYY_RHOBA;
sprot_target db:uniprot_sprot|sp|Q7UM14|SYY_RHOBA 8 432 evalue:1.6e-103 qcov:97.50 identity:46.10;
tigrfam_acc TIGR00234;
tigrfam_desc tyrosine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name tyrS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00234 evalue:5.4e-103 score:344.3 best_domain_score:343.9 name:TIGR00234;
71042 69666 CDS
ID metaerg.pl|05717
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA5794;g__UBA6912;s__UBA6912 sp002450985;
genomedb_acc GCA_002450985.1;
genomedb_target db:genomedb|GCA_002450985.1|DKBA01000187.1_6 97 439 evalue:6.5e-69 qcov:74.90 identity:45.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF09587;
pfam_desc Bacterial capsule synthesis protein PGA_cap;
pfam_id PGA_cap;
pfam_target db:Pfam-A.hmm|PF09587.10 evalue:3.7e-58 score:196.2 best_domain_score:195.6 name:PGA_cap;
sp YES;
69666 69713 lipoprotein_signal_peptide
ID metaerg.pl|05718
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
71479 72663 CDS
ID metaerg.pl|05719
allko_ids K07642; K07704; K08282; K07654; K07682; K07777; K03407; K07641; K07646; K07673; K07778; K07683; K02478; K11623; K07718; K06379; K07676; K02486; K11617; K04757; K07680; K07675; K07674; K01768; K08801; K02480; K07653; K07636;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665006.1 4 381 evalue:9.1e-112 qcov:95.90 identity:62.00;
kegg_pathway_id 00230; 02020;
kegg_pathway_name Purine metabolism; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF02518; PF13581;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-like ATPase domain;
pfam_id HATPase_c; HATPase_c_2;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:4.8e-08 score:32.7 best_domain_score:30.6 name:HATPase_c; db:Pfam-A.hmm|PF13581.6 evalue:2.1e-07 score:30.2 best_domain_score:28.8 name:HATPase_c_2;
tm_num 5;
71479 72663 transmembrane_helix
ID metaerg.pl|05720
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i71515-71568o71581-71649i71668-71736o71779-71847i71947-72015o;
72690 73334 CDS
ID metaerg.pl|05721
allgo_ids GO:0006355; GO:0005737; GO:0003677; GO:0000160;
allko_ids K07642; K11640; K07677; K02491; K07654; K07682; K03407; K07641; K07646; K07639; K07673; K07778; K07651; K01769; K07676; K07644; K02486; K04757; K07675; K02668; K03388; K07674; K07710; K02482; K02480; K07653; K07636; K10715; K07692;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665007.1 3 214 evalue:7.9e-94 qcov:99.10 identity:83.00;
kegg_pathway_id 02020; 03090; 00230; 00790;
kegg_pathway_name Two-component system - General; Type II secretion system; Purine metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00196; PF00072; PF08281;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain; Sigma-70, region 4;
pfam_id GerE; Response_reg; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:1.3e-19 score:68.8 best_domain_score:66.1 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:1.5e-20 score:72.7 best_domain_score:72.2 name:Response_reg; db:Pfam-A.hmm|PF08281.12 evalue:4.7e-07 score:28.6 best_domain_score:27.6 name:Sigma70_r4_2;
sprot_desc Transcriptional regulatory protein DegU;
sprot_id sp|P13800|DEGU_BACSU;
sprot_target db:uniprot_sprot|sp|P13800|DEGU_BACSU 11 212 evalue:7.1e-33 qcov:94.40 identity:37.10;
73443 76097 CDS
ID metaerg.pl|05722
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665008.1 5 883 evalue:8.5e-118 qcov:99.40 identity:44.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 30;
73443 76097 transmembrane_helix
ID metaerg.pl|05723
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i73548-73616o73626-73685i73704-73772o73800-73859i73872-73940o73950-74006i74043-74111o74154-74222i74241-74300o74313-74381i74418-74486o74514-74567i74601-74669o74679-74732i74790-74843o74856-74915i74934-75002o75015-75083i75117-75185o75213-75281i75300-75359o75369-75437i75450-75509o75522-75575i75594-75662o75675-75728i75747-75815o75825-75878i75897-75965o75975-76028i;
76507 76812 CDS
ID metaerg.pl|05724
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02990;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665009.1 1 101 evalue:1.5e-34 qcov:100.00 identity:73.30;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF01250;
pfam_desc Ribosomal protein S6;
pfam_id Ribosomal_S6;
pfam_target db:Pfam-A.hmm|PF01250.17 evalue:1.4e-25 score:88.6 best_domain_score:88.4 name:Ribosomal_S6;
sprot_desc 30S ribosomal protein S6;
sprot_id sp|A8LXG3|RS6_SALAI;
sprot_target db:uniprot_sprot|sp|A8LXG3|RS6_SALAI 1 96 evalue:2.6e-17 qcov:95.00 identity:43.80;
tigrfam_acc TIGR00166;
tigrfam_desc ribosomal protein bS6;
tigrfam_mainrole Protein synthesis;
tigrfam_name S6;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00166 evalue:1.3e-22 score:79.0 best_domain_score:78.8 name:TIGR00166;
76884 77321 CDS
ID metaerg.pl|05725
allgo_ids GO:0003697; GO:0006260;
allko_ids K03111;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442089.1 1 145 evalue:1.3e-55 qcov:100.00 identity:76.70;
kegg_pathway_id 03430; 03440; 03030;
kegg_pathway_name Mismatch repair; Homologous recombination; DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00436;
pfam_desc Single-strand binding protein family;
pfam_id SSB;
pfam_target db:Pfam-A.hmm|PF00436.25 evalue:3.1e-31 score:106.7 best_domain_score:106.5 name:SSB;
sprot_desc Single-stranded DNA-binding protein;
sprot_id sp|Q8NLG0|SSB_CORGL;
sprot_target db:uniprot_sprot|sp|Q8NLG0|SSB_CORGL 1 119 evalue:3.0e-27 qcov:82.10 identity:53.70;
tigrfam_acc TIGR00621;
tigrfam_desc single-stranded DNA-binding protein;
tigrfam_mainrole DNA metabolism;
tigrfam_name ssb;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00621 evalue:9.7e-35 score:119.5 best_domain_score:118.8 name:TIGR00621;
77422 77664 CDS
ID metaerg.pl|05726
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02963;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665010.1 5 80 evalue:2.8e-28 qcov:95.00 identity:85.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF01084;
pfam_desc Ribosomal protein S18;
pfam_id Ribosomal_S18;
pfam_target db:Pfam-A.hmm|PF01084.20 evalue:1.3e-19 score:69.3 best_domain_score:69.1 name:Ribosomal_S18;
sprot_desc 30S ribosomal protein S18;
sprot_id sp|A0LWU3|RS18_ACIC1;
sprot_target db:uniprot_sprot|sp|A0LWU3|RS18_ACIC1 5 78 evalue:5.6e-15 qcov:92.50 identity:54.10;
tigrfam_acc TIGR00165;
tigrfam_desc ribosomal protein bS18;
tigrfam_mainrole Protein synthesis;
tigrfam_name S18;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00165 evalue:1.2e-22 score:79.1 best_domain_score:78.8 name:TIGR00165;
77675 78358 CDS
ID metaerg.pl|05727
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665011.1 1 226 evalue:6.9e-56 qcov:99.60 identity:61.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF03948; PF01281;
pfam_desc Ribosomal protein L9, C-terminal domain; Ribosomal protein L9, N-terminal domain;
pfam_id Ribosomal_L9_C; Ribosomal_L9_N;
pfam_target db:Pfam-A.hmm|PF03948.14 evalue:7.9e-21 score:73.6 best_domain_score:72.6 name:Ribosomal_L9_C; db:Pfam-A.hmm|PF01281.19 evalue:1.7e-20 score:71.6 best_domain_score:70.6 name:Ribosomal_L9_N;
tigrfam_acc TIGR00158;
tigrfam_desc ribosomal protein bL9;
tigrfam_mainrole Protein synthesis;
tigrfam_name L9;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00158 evalue:2.7e-40 score:137.4 best_domain_score:136.3 name:TIGR00158;
78402 79838 CDS
ID metaerg.pl|05728
allec_ids 3.6.4.12;
allgo_ids GO:0003678; GO:0005524; GO:0006260; GO:0005829; GO:1990077; GO:0003677; GO:0006269; GO:0006268;
allko_ids K02314;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441228.1 7 478 evalue:3.0e-194 qcov:98.70 identity:75.50;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF13481; PF00772; PF03796;
pfam_desc AAA domain; DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain;
pfam_id AAA_25; DnaB; DnaB_C;
pfam_target db:Pfam-A.hmm|PF13481.6 evalue:1.7e-11 score:43.3 best_domain_score:41.9 name:AAA_25; db:Pfam-A.hmm|PF00772.21 evalue:8.6e-30 score:102.1 best_domain_score:100.9 name:DnaB; db:Pfam-A.hmm|PF03796.15 evalue:1.9e-108 score:360.8 best_domain_score:360.4 name:DnaB_C;
sprot_desc Replicative DNA helicase;
sprot_id sp|P37469|DNAC_BACSU;
sprot_target db:uniprot_sprot|sp|P37469|DNAC_BACSU 29 463 evalue:2.2e-119 qcov:91.00 identity:51.10;
tigrfam_acc TIGR00665;
tigrfam_desc replicative DNA helicase;
tigrfam_mainrole DNA metabolism;
tigrfam_name DnaB;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00665 evalue:1.4e-169 score:563.6 best_domain_score:563.5 name:TIGR00665;
79948 81165 CDS
ID metaerg.pl|05729
allgo_ids GO:0000155; GO:0007165;
allko_ids K07677; K07708; K07645; K07704; K10909; K08282; K07643; K11231; K02491; K11711; K07642; K02484; K11356; K11640; K11354; K07778; K11633; K07768; K08884; K07711; K11328; K13533; K02478; K07679; K07648; K07651; K07698; K07718; K07654; K07777; K07649; K00936; K07682; K03407; K07637; K07646; K07641; K13598; K07673; K08475; K07639; K07652; K02486; K11383; K12767; K11520; K07769; K14509; K04757; K11357; K11629; K10125; K07647; K13040; K10942; K07717; K07675; K01769; K07650; K10681; K07676; K06379; K13532; K07709; K07644; K08801; K02482; K02480; K07638; K07653; K07636; K13587; K02030; K11527; K07678; K10715; K02668; K03388; K07674; K08479; K10916; K02489; K07716; K07640; K07710; K01768; K07656;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Planomonospora;s__Planomonospora sphaerica;
genomedb_acc GCF_001653075.1;
genomedb_target db:genomedb|GCF_001653075.1|WP_068903966.1 19 386 evalue:3.4e-37 qcov:90.90 identity:37.30;
kegg_pathway_id 05111; 00790; 00230; 03090; 02020; 04011;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Folate biosynthesis; Purine metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF02518; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:8.1e-16 score:57.8 best_domain_score:56.9 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:7e-08 score:31.6 best_domain_score:30.9 name:HisKA;
tm_num 6;
79948 81165 transmembrane_helix
ID metaerg.pl|05730
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i79984-80052o80080-80139i80158-80214o80224-80277i80296-80349o80359-80427i;
81176 81730 CDS
ID metaerg.pl|05731
allko_ids K07735;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669426.1 16 184 evalue:9.9e-61 qcov:91.80 identity:68.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF02622;
pfam_desc Uncharacterized ACR, COG1678;
pfam_id DUF179;
pfam_target db:Pfam-A.hmm|PF02622.15 evalue:2.1e-38 score:131.0 best_domain_score:130.7 name:DUF179;
sprot_desc hypothetical protein;
sprot_id sp|Q82D55|Y5129_STRAW;
sprot_target db:uniprot_sprot|sp|Q82D55|Y5129_STRAW 3 184 evalue:3.6e-49 qcov:98.90 identity:52.20;
82268 81735 CDS
ID metaerg.pl|05732
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665022.1 2 174 evalue:1.5e-21 qcov:97.70 identity:46.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
sp YES;
81735 81791 lipoprotein_signal_peptide
ID metaerg.pl|05733
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
82389 82628 CDS
ID metaerg.pl|05734
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665027.1 1 79 evalue:6.9e-11 qcov:100.00 identity:48.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 2;
82389 82628 transmembrane_helix
ID metaerg.pl|05735
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i82407-82475o82548-82607i;
83515 82721 CDS
ID metaerg.pl|05736
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Kitasatospora;s__Kitasatospora sp000719695;
genomedb_acc GCF_000719695.1;
genomedb_target db:genomedb|GCF_000719695.1|WP_030304163.1 62 252 evalue:3.8e-29 qcov:72.30 identity:44.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF17940; PF13977; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; BetI-type transcriptional repressor, C-terminal; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_31; TetR_C_6; TetR_N;
pfam_target db:Pfam-A.hmm|PF17940.1 evalue:2.2e-13 score:49.6 best_domain_score:49.6 name:TetR_C_31; db:Pfam-A.hmm|PF13977.6 evalue:4.1e-08 score:32.7 best_domain_score:32.7 name:TetR_C_6; db:Pfam-A.hmm|PF00440.23 evalue:1.3e-12 score:46.6 best_domain_score:45.7 name:TetR_N;
89241 83713 CDS
ID metaerg.pl|05737
allgo_ids GO:0003989; GO:0005524; GO:0006633;
allko_ids K01960; K01958; K01968; K08289; K00658; K01964; K03416; K14541; K01965; K01571; K01959; K01457; K01955; K01941; K01966;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__QS-5-72-10;g__QS-5-72-10;s__QS-5-72-10 sp003021615;
genomedb_acc GCA_003021615.1;
genomedb_target db:genomedb|GCA_003021615.1|PSO46861.1 4 1842 evalue:0.0e+00 qcov:99.80 identity:65.00;
kegg_pathway_id 00640; 00791; 00251; 00252; 00220; 00330; 00620; 00670; 00230; 00020; 00240; 00280; 00310;
kegg_pathway_name Propanoate metabolism; Atrazine degradation; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Arginine and proline metabolism; Pyruvate metabolism; One carbon pool by folate; Purine metabolism; Citrate cycle (TCA cycle); Pyrimidine metabolism; Valine, leucine and isoleucine degradation; Lysine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF08326; PF02222; PF02785; PF00289; PF00364; PF01039; PF02786; PF07478;
pfam_desc Acetyl-CoA carboxylase, central region; ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Biotin-requiring enzyme; Carboxyl transferase domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus;
pfam_id ACC_central; ATP-grasp; Biotin_carb_C; Biotin_carb_N; Biotin_lipoyl; Carboxyl_trans; CPSase_L_D2; Dala_Dala_lig_C;
pfam_target db:Pfam-A.hmm|PF08326.12 evalue:1.1e-15 score:56.2 best_domain_score:49.4 name:ACC_central; db:Pfam-A.hmm|PF02222.22 evalue:2e-08 score:33.2 best_domain_score:32.1 name:ATP-grasp; db:Pfam-A.hmm|PF02785.19 evalue:1.1e-36 score:124.5 best_domain_score:123.5 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:1.6e-31 score:108.3 best_domain_score:106.8 name:Biotin_carb_N; db:Pfam-A.hmm|PF00364.22 evalue:4.3e-12 score:44.9 best_domain_score:43.7 name:Biotin_lipoyl; db:Pfam-A.hmm|PF01039.22 evalue:4e-28 score:97.5 best_domain_score:96.6 name:Carboxyl_trans; db:Pfam-A.hmm|PF02786.17 evalue:4.1e-64 score:215.2 best_domain_score:214.3 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:2.3e-11 score:42.9 best_domain_score:42.1 name:Dala_Dala_lig_C;
89607 90353 CDS
ID metaerg.pl|05738
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0009898; GO:0016887; GO:0005525; GO:0043215; GO:1900753; GO:0046677;
allko_ids K02045; K11072; K01996; K06861; K02071; K02017; K01997; K05847; K02010; K02052; K02006; K02000; K01990; K02023; K01995; K02049; K01998; K10111;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Nocardia;s__Nocardia mexicana;
genomedb_acc GCF_001613165.1;
genomedb_target db:genomedb|GCF_001613165.1|WP_068015062.1 1 245 evalue:6.1e-82 qcov:98.80 identity:66.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
metacyc_pathway_id PWY-6135; PWY-6171; PWY-6166; PWY-6188; PWYG-321; PWY-6113;
metacyc_pathway_name ; ; ; ; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.7e-13 score:50.3 best_domain_score:34.4 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:4.6e-29 score:100.9 best_domain_score:99.9 name:ABC_tran;
sprot_desc Daunorubicin/doxorubicin resistance ATP-binding protein DrrA;
sprot_id sp|P32010|DRRA_STRPE;
sprot_target db:uniprot_sprot|sp|P32010|DRRA_STRPE 3 216 evalue:1.1e-37 qcov:86.30 identity:39.30;
90329 91909 CDS
ID metaerg.pl|05739
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Planobispora;s__Planobispora rosea;
genomedb_acc GCF_001696485.1;
genomedb_target db:genomedb|GCF_001696485.1|WP_068921373.1 4 522 evalue:9.4e-48 qcov:98.70 identity:37.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
tm_num 10;
90329 91909 transmembrane_helix
ID metaerg.pl|05740
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i90401-90469o90497-90565i90626-90694o90722-90790i90848-90907o91016-91084i91463-91531o91559-91627i91688-91756o91769-91837i;
93255 91975 CDS
ID metaerg.pl|05741
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0008643;
allko_ids K02057; K02056; K10441; K10562; K01998; K10551; K01995; K10544;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108664716.1 17 421 evalue:3.5e-101 qcov:95.10 identity:55.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:6.8e-39 score:132.9 best_domain_score:132.2 name:BPD_transp_2;
sprot_desc Xylose transport system permease protein XylH;
sprot_id sp|P0AGI6|XYLH_ECO57;
sprot_target db:uniprot_sprot|sp|P0AGI6|XYLH_ECO57 55 418 evalue:7.7e-47 qcov:85.40 identity:37.20;
tm_num 10;
93255 91975 transmembrane_helix
ID metaerg.pl|05742
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i92131-92190o92218-92286i92305-92358o92371-92439i92452-92520o92578-92646i92683-92751o92779-92847i92905-92973o93142-93210i;
94031 93252 CDS
ID metaerg.pl|05743
allec_ids 7.5.2.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015407;
allko_ids K02010; K02056; K05847; K02006; K02052; K02017; K02071; K06861; K01996; K10441; K02045; K11072; K02049; K01995; K10111; K10545; K10562; K05816; K02023; K10539;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA5794;g__UBA6912;s__UBA6912 sp002450985;
genomedb_acc GCA_002450985.1;
genomedb_target db:genomedb|GCA_002450985.1|DKBA01000072.1_16 7 254 evalue:5.2e-92 qcov:95.80 identity:74.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3e-10 score:39.6 best_domain_score:21.0 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:3.9e-27 score:94.7 best_domain_score:94.3 name:ABC_tran;
sprot_desc Fructose import ATP-binding protein FrcA;
sprot_id sp|Q9F9B0|FRCA_RHIML;
sprot_target db:uniprot_sprot|sp|Q9F9B0|FRCA_RHIML 7 244 evalue:3.2e-48 qcov:91.90 identity:44.30;
95231 94035 CDS
ID metaerg.pl|05744
allgo_ids GO:0030288; GO:0048029; GO:0042732; GO:0015753;
allko_ids K10543;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Ga0077560;f__Ga0077560;g__Ga0077541;s__Ga0077541 sp001464995;
genomedb_acc GCA_001464995.1;
genomedb_target db:genomedb|GCA_001464995.1|LNEQ01000182.1_16 52 389 evalue:2.0e-106 qcov:84.90 identity:65.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF13407;
pfam_desc Periplasmic binding protein domain;
pfam_id Peripla_BP_4;
pfam_target db:Pfam-A.hmm|PF13407.6 evalue:3.4e-58 score:196.5 best_domain_score:196.1 name:Peripla_BP_4;
sp YES;
sprot_desc D-xylose-binding periplasmic protein;
sprot_id sp|P37387|XYLF_ECOLI;
sprot_target db:uniprot_sprot|sp|P37387|XYLF_ECOLI 77 383 evalue:2.1e-54 qcov:77.10 identity:41.20;
94035 94106 lipoprotein_signal_peptide
ID metaerg.pl|05745
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
96162 95452 CDS
ID metaerg.pl|05746
allgo_ids GO:0000160; GO:0003677; GO:0006355;
allko_ids K02482; K02480; K07653; K07638; K07636; K11527; K10715; K07678; K02668; K03388; K08479; K10916; K02489; K07716; K07710; K01768; K12767; K02486; K13761; K11383; K04757; K10125; K11357; K07647; K07675; K07717; K07650; K06379; K10681; K07676; K07709; K07644; K07778; K11354; K07768; K07711; K07679; K02478; K07648; K07651; K07654; K07682; K03407; K07637; K07641; K07646; K07639; K08475; K01120; K07673; K07652; K07708; K07677; K07704; K01937; K08282; K11231; K02491; K11711; K07642; K00760; K02484; K11356; K11640; K07776;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Jiangella;s__Jiangella alba;
genomedb_acc GCF_900106035.1;
genomedb_target db:genomedb|GCF_900106035.1|WP_069112044.1 1 232 evalue:2.5e-80 qcov:98.30 identity:70.40;
kegg_pathway_id 00230; 05111; 00240; 00983; 00790; 04011; 02020; 03090;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; Drug metabolism - other enzymes; Folate biosynthesis; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:3.7e-25 score:87.5 best_domain_score:86.9 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:5.4e-21 score:73.7 best_domain_score:72.7 name:Trans_reg_C;
sprot_desc Sensory transduction protein regX3;
sprot_id sp|Q9F868|REGX3_MYCS2;
sprot_target db:uniprot_sprot|sp|Q9F868|REGX3_MYCS2 6 230 evalue:1.7e-43 qcov:95.30 identity:44.10;
98500 96152 CDS
ID metaerg.pl|05747
allgo_ids GO:0005524; GO:0016887;
allko_ids K02489; K07697; K07716; K02023; K07640; K07710; K07656; K01768; K02668; K03388; K07674; K08479; K10916; K11527; K02030; K13587; K10715; K02000; K07678; K02482; K08801; K14489; K02480; K10539; K07653; K07638; K07636; K07709; K13532; K07644; K10562; K01998; K10545; K10111; K01995; K01769; K07650; K02049; K06379; K07676; K10681; K07647; K13040; K10942; K07675; K07717; K05816; K12767; K11383; K02486; K14509; K11520; K07769; K04757; K10125; K11629; K11357; K13598; K07641; K07646; K07639; K08475; K07673; K07652; K10441; K07654; K07682; K00936; K07649; K07777; K01996; K03407; K07637; K06861; K02071; K07679; K02478; K07648; K07651; K07718; K02045; K11072; K07698; K07778; K07683; K11354; K11633; K07768; K07711; K00873; K08884; K13533; K11328; K02052; K02484; K02006; K11356; K11640; K11711; K01997; K05847; K07642; K02010; K02056; K02017; K07643; K11231; K02491; K07677; K07645; K07708; K10909; K07704; K08282;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Jiangella;s__Jiangella alkaliphila;
genomedb_acc GCF_900105925.1;
genomedb_target db:genomedb|GCF_900105925.1|WP_082155010.1 6 769 evalue:1.7e-202 qcov:97.70 identity:52.90;
kegg_pathway_id 00710; 00010; 05111; 00230; 04011; 02020; 03090; 02010; 00620; 00790;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Vibrio cholerae pathogenic cycle; Purine metabolism; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; ABC transporters - General; Pyruvate metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF00005; PF01590; PF13185; PF02518; PF00512;
pfam_desc ABC transporter; GAF domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id ABC_tran; GAF; GAF_2; HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:3.4e-29 score:101.3 best_domain_score:100.3 name:ABC_tran; db:Pfam-A.hmm|PF01590.26 evalue:6.2e-11 score:42.3 best_domain_score:33.9 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:2.2e-12 score:46.7 best_domain_score:46.7 name:GAF_2; db:Pfam-A.hmm|PF02518.26 evalue:1.8e-21 score:75.9 best_domain_score:74.8 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.7e-13 score:49.6 best_domain_score:49.6 name:HisKA;
99196 98549 CDS
ID metaerg.pl|05748
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Dermatophilaceae;g__Tetrasphaera;s__Tetrasphaera japonica;
genomedb_acc GCF_001046855.1;
genomedb_target db:genomedb|GCF_001046855.1|WP_048554596.1 3 215 evalue:5.8e-44 qcov:99.10 identity:51.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF13886;
pfam_desc Domain of unknown function (DUF4203);
pfam_id DUF4203;
pfam_target db:Pfam-A.hmm|PF13886.6 evalue:2.4e-08 score:33.1 best_domain_score:32.9 name:DUF4203;
tm_num 7;
99196 98549 transmembrane_helix
ID metaerg.pl|05749
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology o98558-98617i98630-98689o98702-98770i98774-98842o98855-98923i98942-99010o99068-99136i;
99417 100403 CDS
ID metaerg.pl|05750
allgo_ids GO:0005524;
allko_ids K02052; K02006; K01996; K02071; K06861; K02045; K01995; K01998; K10111;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus sp003075095;
genomedb_acc GCA_003075095.1;
genomedb_target db:genomedb|GCA_003075095.1|QCZF01000001.1_327 19 307 evalue:1.2e-122 qcov:88.10 identity:76.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.7e-13 score:49.6 best_domain_score:27.6 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:3.4e-25 score:88.4 best_domain_score:87.6 name:ABC_tran;
100400 101254 CDS
ID metaerg.pl|05751
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus sp900230285;
genomedb_acc GCF_900230285.1;
genomedb_target db:genomedb|GCF_900230285.1|WP_097184412.1 1 284 evalue:9.1e-114 qcov:100.00 identity:74.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF01061; PF12698;
pfam_desc ABC-2 type transporter; ABC-2 family transporter protein;
pfam_id ABC2_membrane; ABC2_membrane_3;
pfam_target db:Pfam-A.hmm|PF01061.24 evalue:1.8e-12 score:46.3 best_domain_score:45.9 name:ABC2_membrane; db:Pfam-A.hmm|PF12698.7 evalue:2.4e-11 score:42.6 best_domain_score:42.2 name:ABC2_membrane_3;
tm_num 6;
100400 101254 transmembrane_helix
ID metaerg.pl|05752
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i100484-100537o100565-100633i100727-100795o100838-100906i100943-101011o101111-101179i;
101262 101501 CDS
ID metaerg.pl|05753
allgo_ids GO:0043565; GO:0003677;
allko_ids K00517; K00891; K01486; K00012; K03041; K07729;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora chaiyaphumensis;
genomedb_acc GCF_900091435.1;
genomedb_target db:genomedb|GCF_900091435.1|WP_091269251.1 1 79 evalue:4.3e-29 qcov:100.00 identity:81.00;
kegg_pathway_id 03020; 00040; 00903; 00940; 00400; 00230; 00361; 00500; 00520; 00626;
kegg_pathway_name RNA polymerase; Pentose and glucuronate interconversions; Limonene and pinene degradation; Phenylpropanoid biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Purine metabolism; gamma-Hexachlorocyclohexane degradation; Starch and sucrose metabolism; Nucleotide sugars metabolism; Naphthalene and anthracene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF01381; PF13560;
pfam_desc Helix-turn-helix; Helix-turn-helix domain;
pfam_id HTH_3; HTH_31;
pfam_target db:Pfam-A.hmm|PF01381.22 evalue:1.5e-14 score:53.0 best_domain_score:52.8 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:3.1e-09 score:36.3 best_domain_score:35.9 name:HTH_31;
sprot_desc Uncharacterized HTH-type transcriptional regulator AF_1793;
sprot_id sp|O28481|Y1793_ARCFU;
sprot_target db:uniprot_sprot|sp|O28481|Y1793_ARCFU 5 64 evalue:1.2e-06 qcov:75.90 identity:43.30;
101617 102147 CDS
ID metaerg.pl|05754
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Lacimicrobium;s__Lacimicrobium alkaliphilum;
genomedb_acc GCF_002591895.1;
genomedb_target db:genomedb|GCF_002591895.1|WP_099033041.1 26 177 evalue:2.1e-23 qcov:85.90 identity:44.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
pfam_acc PF10011;
pfam_desc Predicted membrane protein (DUF2254);
pfam_id DUF2254;
pfam_target db:Pfam-A.hmm|PF10011.9 evalue:5.2e-18 score:64.2 best_domain_score:64.0 name:DUF2254;
tm_num 4;
101617 102147 transmembrane_helix
ID metaerg.pl|05755
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.107952; 25.6785; 0.12856; 25.326; 0.11606;
topology i101671-101739o101782-101850i101911-101970o101998-102066i;
>Feature NODE_35_length_102026_cov_37.2594
636 1 CDS
ID metaerg.pl|05756
allec_ids 1.4.1.13;
allgo_ids GO:0071949; GO:0051539; GO:0004355; GO:0046872; GO:0097054;
allko_ids K00264; K00266; K03388;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725047.1 5 212 evalue:9.8e-105 qcov:98.10 identity:83.20;
kegg_pathway_id 00251; 00910; 00790;
kegg_pathway_name Glutamate metabolism; Nitrogen metabolism; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id GLUTAMINEFUM-PWY; AMMASSIM-PWY; GLUTSYN-PWY; PWY-5505;
metacyc_pathway_name L-glutamine degradation II;; ammonia assimilation cycle III;; L-glutamate biosynthesis I;; L-glutamate and L-glutamine biosynthesis;;
metacyc_pathway_type GLUTAMINE-DEG;; Ammonia-Assimilation; Super-Pathways;; GLUTAMATE-SYN;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;;
pfam_acc PF01494; PF14691; PF13450;
pfam_desc FAD binding domain; Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; NAD(P)-binding Rossmann-like domain;
pfam_id FAD_binding_3; Fer4_20; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01494.19 evalue:2.7e-05 score:22.8 best_domain_score:22.2 name:FAD_binding_3; db:Pfam-A.hmm|PF14691.6 evalue:5.8e-37 score:125.2 best_domain_score:124.8 name:Fer4_20; db:Pfam-A.hmm|PF13450.6 evalue:2e-07 score:30.4 best_domain_score:29.6 name:NAD_binding_8;
sprot_desc Glutamate synthase [NADPH] small chain;
sprot_id sp|E1V8I0|GLTD_HALED;
sprot_target db:uniprot_sprot|sp|E1V8I0|GLTD_HALED 5 212 evalue:1.6e-85 qcov:98.10 identity:66.80;
5084 636 CDS
ID metaerg.pl|05757
allec_ids 1.4.1.13;
allgo_ids GO:0006537; GO:0015930; GO:0016638; GO:0055114; GO:0051538; GO:0004355; GO:0046872; GO:0006541; GO:0097054;
allko_ids K00264; K00265; K00202; K00284;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725048.1 3 1482 evalue:0.0e+00 qcov:99.90 identity:78.30;
kegg_pathway_id 00790; 00251; 00910;
kegg_pathway_name Folate biosynthesis; Glutamate metabolism; Nitrogen metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id GLUTAMINEFUM-PWY; PWY-5505; AMMASSIM-PWY; GLUTSYN-PWY;
metacyc_pathway_name L-glutamine degradation II;; L-glutamate and L-glutamine biosynthesis;; ammonia assimilation cycle III;; L-glutamate biosynthesis I;;
metacyc_pathway_type GLUTAMINE-DEG;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;; Ammonia-Assimilation; Super-Pathways;; GLUTAMATE-SYN;;
pfam_acc PF00310; PF01645; PF04898; PF01493;
pfam_desc Glutamine amidotransferases class-II; Conserved region in glutamate synthase; Glutamate synthase central domain; GXGXG motif;
pfam_id GATase_2; Glu_synthase; Glu_syn_central; GXGXG;
pfam_target db:Pfam-A.hmm|PF00310.21 evalue:2.8e-161 score:536.2 best_domain_score:535.8 name:GATase_2; db:Pfam-A.hmm|PF01645.17 evalue:2.4e-150 score:500.0 best_domain_score:499.4 name:Glu_synthase; db:Pfam-A.hmm|PF04898.14 evalue:1.6e-98 score:328.8 best_domain_score:327.4 name:Glu_syn_central; db:Pfam-A.hmm|PF01493.19 evalue:4.5e-76 score:253.9 best_domain_score:253.3 name:GXGXG;
sprot_desc Glutamate synthase [NADPH] large chain;
sprot_id sp|E1V8I1|GLTB_HALED;
sprot_target db:uniprot_sprot|sp|E1V8I1|GLTB_HALED 4 1479 evalue:0.0e+00 qcov:99.60 identity:58.20;
5448 6332 CDS
ID metaerg.pl|05758
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169861.1 4 293 evalue:1.3e-102 qcov:98.60 identity:59.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF07884;
pfam_desc Vitamin K epoxide reductase family;
pfam_id VKOR;
pfam_target db:Pfam-A.hmm|PF07884.14 evalue:2.3e-22 score:78.7 best_domain_score:78.7 name:VKOR;
tm_num 5;
5448 6332 transmembrane_helix
ID metaerg.pl|05759
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i5532-5600o5673-5741i5760-5828o5841-5909i5946-6014o;
8662 6392 CDS
ID metaerg.pl|05760
allec_ids 3.4.24.-;
allgo_ids GO:0004222; GO:0005615; GO:0008270; GO:0009405;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169469.1 18 756 evalue:2.8e-295 qcov:97.80 identity:66.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF07504; PF02225; PF02128;
pfam_desc Fungalysin/Thermolysin Propeptide Motif; PA domain; Fungalysin metallopeptidase (M36);
pfam_id FTP; PA; Peptidase_M36;
pfam_target db:Pfam-A.hmm|PF07504.13 evalue:1.6e-07 score:30.3 best_domain_score:29.4 name:FTP; db:Pfam-A.hmm|PF02225.22 evalue:2.5e-12 score:45.9 best_domain_score:44.7 name:PA; db:Pfam-A.hmm|PF02128.15 evalue:5.4e-143 score:475.9 best_domain_score:475.6 name:Peptidase_M36;
sp YES;
sprot_desc Extracellular metalloproteinase 2;
sprot_id sp|B6V873|MEP2_TRITO;
sprot_target db:uniprot_sprot|sp|B6V873|MEP2_TRITO 49 743 evalue:2.0e-85 qcov:91.90 identity:30.70;
6392 6454 signal_peptide
ID metaerg.pl|05761
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
8829 11726 CDS
ID metaerg.pl|05762
allgo_ids GO:0004181; GO:0006508; GO:0008270;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__BM003;f__BM003;g__BM003;s__BM003 sp002868855;
genomedb_acc GCA_002868855.1;
genomedb_target db:genomedb|GCA_002868855.1|PLX54572.1 10 962 evalue:6.4e-252 qcov:98.80 identity:48.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00246;
pfam_desc Zinc carboxypeptidase;
pfam_id Peptidase_M14;
pfam_target db:Pfam-A.hmm|PF00246.24 evalue:8e-16 score:57.9 best_domain_score:57.2 name:Peptidase_M14;
sp YES;
8829 8879 signal_peptide
ID metaerg.pl|05763
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
11810 12703 CDS
ID metaerg.pl|05764
allec_ids 4.3.3.7;
allgo_ids GO:0016829; GO:0005737; GO:0008840; GO:0019877; GO:0009089;
allko_ids K01714;
genomedb_OC d__Archaea;p__Iainarchaeota;c__Iainarchaeia;o__Iainarchaeales;f__Iainarchaeaceae;g__UBA493;s__UBA493 sp002762975;
genomedb_acc GCA_002762975.1;
genomedb_target db:genomedb|GCA_002762975.1|PIN85622.1 1 295 evalue:7.4e-82 qcov:99.30 identity:51.90;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00701;
pfam_desc Dihydrodipicolinate synthetase family;
pfam_id DHDPS;
pfam_target db:Pfam-A.hmm|PF00701.22 evalue:7.2e-95 score:316.2 best_domain_score:316.1 name:DHDPS;
sprot_desc 4-hydroxy-tetrahydrodipicolinate synthase;
sprot_id sp|Q6MDD9|DAPA_PARUW;
sprot_target db:uniprot_sprot|sp|Q6MDD9|DAPA_PARUW 1 293 evalue:5.3e-79 qcov:98.70 identity:51.90;
tigrfam_acc TIGR00674;
tigrfam_desc 4-hydroxy-tetrahydrodipicolinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapA;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00674 evalue:4.2e-101 score:336.7 best_domain_score:336.5 name:TIGR00674;
13446 12736 CDS
ID metaerg.pl|05765
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A denitrificans;
genomedb_acc GCF_002000365.1;
genomedb_target db:genomedb|GCF_002000365.1|WP_077280061.1 8 234 evalue:4.1e-67 qcov:96.20 identity:57.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF04264;
pfam_desc YceI-like domain;
pfam_id YceI;
pfam_target db:Pfam-A.hmm|PF04264.13 evalue:9.8e-11 score:41.6 best_domain_score:41.3 name:YceI;
sp YES;
12736 12804 lipoprotein_signal_peptide
ID metaerg.pl|05766
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
13475 14038 CDS
ID metaerg.pl|05767
allgo_ids GO:0009055; GO:0016021; GO:0005886; GO:0046872; GO:0022904;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A thiocyanodenitrificans;
genomedb_acc GCF_000378965.1;
genomedb_target db:genomedb|GCF_000378965.1|WP_083908750.1 1 183 evalue:2.6e-69 qcov:97.90 identity:67.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF01292;
pfam_desc Prokaryotic cytochrome b561;
pfam_id Ni_hydr_CYTB;
pfam_target db:Pfam-A.hmm|PF01292.20 evalue:6.3e-28 score:96.8 best_domain_score:96.5 name:Ni_hydr_CYTB;
sprot_desc Cytochrome b561 homolog 2;
sprot_id sp|P75925|C56I_ECOLI;
sprot_target db:uniprot_sprot|sp|P75925|C56I_ECOLI 7 180 evalue:1.2e-23 qcov:93.00 identity:35.40;
tm_num 4;
13475 14038 transmembrane_helix
ID metaerg.pl|05768
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i13511-13579o13637-13696i13757-13825o13916-13984i;
14020 14583 CDS
ID metaerg.pl|05769
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A denitrificans;
genomedb_acc GCF_002000365.1;
genomedb_target db:genomedb|GCF_002000365.1|WP_077280063.1 1 186 evalue:3.3e-35 qcov:99.50 identity:45.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF04264;
pfam_desc YceI-like domain;
pfam_id YceI;
pfam_target db:Pfam-A.hmm|PF04264.13 evalue:1.1e-14 score:54.4 best_domain_score:54.2 name:YceI;
sp YES;
tm_num 1;
14020 14085 signal_peptide
ID metaerg.pl|05770
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
14020 14583 transmembrane_helix
ID metaerg.pl|05771
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i14032-14100o;
14626 14961 CDS
ID metaerg.pl|05772
allgo_ids GO:0009055; GO:0015035; GO:0045454;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725052.1 9 111 evalue:2.1e-29 qcov:92.80 identity:58.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00462;
pfam_desc Glutaredoxin;
pfam_id Glutaredoxin;
pfam_target db:Pfam-A.hmm|PF00462.24 evalue:1.6e-10 score:40.3 best_domain_score:39.7 name:Glutaredoxin;
sp YES;
tm_num 1;
14626 14712 signal_peptide
ID metaerg.pl|05773
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
14626 14961 transmembrane_helix
ID metaerg.pl|05774
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i14644-14712o;
16237 15191 CDS
ID metaerg.pl|05775
allec_ids 1.18.1.2;
allgo_ids GO:0016491; GO:0055114; GO:0004324; GO:0050660; GO:0050661;
allko_ids K00384;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725053.1 3 347 evalue:7.1e-169 qcov:99.10 identity:82.90;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id PWY-101; PHOTOALL-PWY;
metacyc_pathway_name photosynthesis light reactions;; oxygenic photosynthesis;;
metacyc_pathway_type Electron-Transfer; Photosynthesis;; Photosynthesis; Super-Pathways;;
pfam_acc PF03486; PF13434; PF00070; PF07992; PF13738;
pfam_desc HI0933-like protein; L-lysine 6-monooxygenase (NADPH-requiring); Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id HI0933_like; K_oxygenase; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF03486.14 evalue:2.6e-08 score:32.2 best_domain_score:19.9 name:HI0933_like; db:Pfam-A.hmm|PF13434.6 evalue:3e-06 score:25.8 best_domain_score:24.7 name:K_oxygenase; db:Pfam-A.hmm|PF00070.27 evalue:1.9e-07 score:30.8 best_domain_score:21.2 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.3e-22 score:79.7 best_domain_score:79.4 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:7e-22 score:77.3 best_domain_score:70.2 name:Pyr_redox_3;
sprot_desc Ferredoxin--NADP reductase 2;
sprot_id sp|Q1LKJ7|FENR2_CUPMC;
sprot_target db:uniprot_sprot|sp|Q1LKJ7|FENR2_CUPMC 10 348 evalue:7.1e-115 qcov:97.40 identity:59.60;
16490 17989 CDS
ID metaerg.pl|05776
allgo_ids GO:0006508; GO:0008236;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724884.1 48 497 evalue:6.1e-97 qcov:90.20 identity:48.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF17820; PF03572; PF14684;
pfam_desc PDZ domain; Peptidase family S41; Tricorn protease C1 domain;
pfam_id PDZ_6; Peptidase_S41; Tricorn_C1;
pfam_target db:Pfam-A.hmm|PF17820.1 evalue:1.1e-07 score:30.8 best_domain_score:29.7 name:PDZ_6; db:Pfam-A.hmm|PF03572.18 evalue:2.7e-26 score:91.3 best_domain_score:90.7 name:Peptidase_S41; db:Pfam-A.hmm|PF14684.6 evalue:9.1e-08 score:31.3 best_domain_score:30.3 name:Tricorn_C1;
18021 18788 CDS
ID metaerg.pl|05777
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724883.1 20 254 evalue:2.5e-62 qcov:92.20 identity:53.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
sp YES;
18021 18098 signal_peptide
ID metaerg.pl|05778
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
18833 19573 CDS
ID metaerg.pl|05779
allec_ids 3.2.2.27;
allgo_ids GO:0005737; GO:0004844; GO:0006284;
allko_ids K03648; K10800;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725054.1 21 246 evalue:1.2e-101 qcov:91.90 identity:76.10;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF03167;
pfam_desc Uracil DNA glycosylase superfamily;
pfam_id UDG;
pfam_target db:Pfam-A.hmm|PF03167.19 evalue:1.5e-23 score:82.7 best_domain_score:82.2 name:UDG;
sprot_desc Uracil-DNA glycosylase;
sprot_id sp|Q92LU5|UNG_RHIME;
sprot_target db:uniprot_sprot|sp|Q92LU5|UNG_RHIME 26 246 evalue:2.0e-87 qcov:89.80 identity:66.50;
tigrfam_acc TIGR00628;
tigrfam_desc uracil-DNA glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name ung;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00628 evalue:8.9e-81 score:269.9 best_domain_score:269.7 name:TIGR00628;
19670 20587 CDS
ID metaerg.pl|05780
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726987.1 2 305 evalue:7.9e-156 qcov:99.70 identity:87.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF02274;
pfam_desc Amidinotransferase;
pfam_id Amidinotransf;
pfam_target db:Pfam-A.hmm|PF02274.17 evalue:1.4e-29 score:102.5 best_domain_score:98.7 name:Amidinotransf;
20769 21002 CDS
ID metaerg.pl|05781
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725067.1 3 76 evalue:6.7e-19 qcov:96.10 identity:68.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
sp YES;
tm_num 1;
20769 20840 signal_peptide
ID metaerg.pl|05782
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
20769 21002 transmembrane_helix
ID metaerg.pl|05783
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology o20781-20849i;
21006 21683 CDS
ID metaerg.pl|05784
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0009405; GO:0040008; GO:0006355;
allko_ids K02491; K11231; K07704; K01937; K08282; K07708; K07645; K07677; K11356; K11640; K00760; K02484; K07642; K11711; K07651; K07718; K07679; K02478; K07648; K07711; K08884; K07778; K11354; K02575; K07768; K07652; K07641; K07646; K08475; K07639; K01120; K07673; K03407; K07637; K07654; K07682; K07675; K07717; K07647; K04757; K10125; K11357; K12767; K13761; K11383; K02486; K07769; K07644; K07709; K07650; K06379; K10681; K07676; K10715; K07678; K11527; K07638; K07653; K07636; K02482; K02480; K07710; K07640; K01768; K02489; K07716; K08479; K10916; K02668; K03388; K07660;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725068.1 1 225 evalue:3.6e-97 qcov:100.00 identity:75.10;
kegg_pathway_id 04011; 02020; 03090; 00790; 00983; 00230; 05111; 00240;
kegg_pathway_name MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Folate biosynthesis; Drug metabolism - other enzymes; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:1e-26 score:92.5 best_domain_score:92.1 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:2.2e-21 score:75.0 best_domain_score:74.0 name:Trans_reg_C;
sprot_desc Virulence transcriptional regulatory protein PhoP;
sprot_id sp|Q8Z7H2|PHOP_SALTI;
sprot_target db:uniprot_sprot|sp|Q8Z7H2|PHOP_SALTI 1 223 evalue:4.4e-49 qcov:99.10 identity:44.40;
21692 23059 CDS
ID metaerg.pl|05785
allko_ids K11640; K11356; K02484; K07642; K11711; K07643; K11231; K08282; K07704; K07708; K07645; K07677; K07652; K07673; K07639; K08475; K07646; K07641; K13598; K07637; K03407; K07777; K07649; K00936; K07682; K07654; K07718; K07651; K07648; K02478; K07679; K11328; K08884; K07711; K07768; K11633; K07778; K07644; K07709; K10681; K06379; K07650; K01769; K07717; K07675; K13040; K10942; K07647; K07680; K11357; K11629; K10125; K04757; K14509; K07769; K11520; K02486; K11383; K12767; K01768; K07656; K07710; K07640; K07716; K02489; K07674; K08479; K03388; K02668; K07678; K10715; K11527; K02030; K07636; K07638; K07653; K02480; K02482; K08801;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725069.1 12 455 evalue:3.5e-160 qcov:97.60 identity:66.40;
kegg_pathway_id 05111; 00230; 00790; 03090; 04011; 02020;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Folate biosynthesis; Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF02518;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;
pfam_id HATPase_c;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:7.6e-18 score:64.3 best_domain_score:63.7 name:HATPase_c;
tm_num 2;
21692 23059 transmembrane_helix
ID metaerg.pl|05786
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology o21728-21796i22208-22276o;
23071 23862 CDS
ID metaerg.pl|05787
allec_ids 3.6.1.8;
allgo_ids GO:0005524; GO:0047693; GO:0046872;
allko_ids K02428; K04765;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725070.1 1 259 evalue:2.2e-101 qcov:98.50 identity:74.50;
kegg_pathway_id 00230; 00240;
kegg_pathway_name Purine metabolism; Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF03819; PF01503;
pfam_desc MazG nucleotide pyrophosphohydrolase domain; Phosphoribosyl-ATP pyrophosphohydrolase;
pfam_id MazG; PRA-PH;
pfam_target db:Pfam-A.hmm|PF03819.17 evalue:3.1e-40 score:135.5 best_domain_score:97.7 name:MazG; db:Pfam-A.hmm|PF01503.17 evalue:2e-14 score:53.1 best_domain_score:26.6 name:PRA-PH;
sprot_desc Nucleoside triphosphate pyrophosphohydrolase;
sprot_id sp|P0AEY4|MAZG_ECO57;
sprot_target db:uniprot_sprot|sp|P0AEY4|MAZG_ECO57 6 259 evalue:1.2e-66 qcov:96.60 identity:51.20;
tigrfam_acc TIGR00444;
tigrfam_desc MazG family protein;
tigrfam_mainrole Unknown function;
tigrfam_name mazG;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00444 evalue:2.6e-90 score:301.6 best_domain_score:301.4 name:TIGR00444;
23859 24686 CDS
ID metaerg.pl|05788
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Hydrogenophilaceae;g__Thiobacillus;s__Thiobacillus sp002281775;
genomedb_acc GCA_002281775.1;
genomedb_target db:genomedb|GCA_002281775.1|OYZ06701.1 4 274 evalue:9.3e-55 qcov:98.50 identity:44.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF08241;
pfam_desc Methyltransferase domain;
pfam_id Methyltransf_11;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:2.4e-06 score:27.3 best_domain_score:26.2 name:Methyltransf_11;
24734 27226 CDS
ID metaerg.pl|05789
allgo_ids GO:0005524; GO:0009058; GO:0016874;
allko_ids K01928;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rubricoccaceae;g__Rubrivirga;s__Rubrivirga sp002283555;
genomedb_acc GCF_002283555.1;
genomedb_target db:genomedb|GCF_002283555.1|WP_095515116.1 77 828 evalue:1.1e-79 qcov:90.60 identity:30.90;
kegg_pathway_id 00550; 00300;
kegg_pathway_name Peptidoglycan biosynthesis; Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF02875; PF08245;
pfam_desc Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF02875.21 evalue:3.9e-06 score:26.3 best_domain_score:23.3 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:7.6e-19 score:67.7 best_domain_score:67.1 name:Mur_ligase_M;
27223 27594 CDS
ID metaerg.pl|05790
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
sp YES;
27223 27282 signal_peptide
ID metaerg.pl|05791
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
27674 27748 tRNA
ID metaerg.pl|05792
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
name tRNA_Lys_ttt;
27753 28397 CDS
ID metaerg.pl|05793
allgo_ids GO:0006400; GO:0008176;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725072.1 4 214 evalue:1.0e-72 qcov:98.60 identity:64.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF13649; PF13847; PF02390;
pfam_desc Methyltransferase domain; Methyltransferase domain; Putative methyltransferase;
pfam_id Methyltransf_25; Methyltransf_31; Methyltransf_4;
pfam_target db:Pfam-A.hmm|PF13649.6 evalue:2e-06 score:27.6 best_domain_score:26.5 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.8e-08 score:33.5 best_domain_score:32.8 name:Methyltransf_31; db:Pfam-A.hmm|PF02390.17 evalue:1.2e-11 score:43.6 best_domain_score:39.5 name:Methyltransf_4;
28409 29230 CDS
ID metaerg.pl|05794
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL39645.1 1 273 evalue:2.7e-86 qcov:100.00 identity:59.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF08241;
pfam_desc Methyltransferase domain;
pfam_id Methyltransf_11;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:0.00018 score:21.3 best_domain_score:20.5 name:Methyltransf_11;
sp YES;
28409 28471 signal_peptide
ID metaerg.pl|05795
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
29353 31599 CDS
ID metaerg.pl|05796
allec_ids 5.6.2.3; 5.99.1.-;
allgo_ids GO:0003677; GO:0003916; GO:0005524; GO:0005694; GO:0006265; GO:0005737; GO:0009330; GO:0009340; GO:0019897; GO:0003918; GO:0007059;
allko_ids K02621;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725075.1 1 748 evalue:0.0e+00 qcov:100.00 identity:87.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF03989; PF00521;
pfam_desc DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A;
pfam_id DNA_gyraseA_C; DNA_topoisoIV;
pfam_target db:Pfam-A.hmm|PF03989.13 evalue:3.8e-08 score:31.9 best_domain_score:18.4 name:DNA_gyraseA_C; db:Pfam-A.hmm|PF00521.20 evalue:1.3e-131 score:438.7 best_domain_score:438.4 name:DNA_topoisoIV;
sprot_desc DNA topoisomerase 4 subunit A;
sprot_id sp|Q9HUK1|PARC_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HUK1|PARC_PSEAE 12 744 evalue:4.5e-268 qcov:98.00 identity:63.40;
tigrfam_acc TIGR01062;
tigrfam_desc DNA topoisomerase IV, A subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name parC_Gneg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01062 evalue:0 score:1057.3 best_domain_score:1057.1 name:TIGR01062;
31834 32793 CDS
ID metaerg.pl|05797
allgo_ids GO:0005515;
allko_ids K01768;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725076.1 1 318 evalue:1.9e-75 qcov:99.70 identity:51.80;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF01476; PF00515; PF13414; PF13428; PF07719; PF13181;
pfam_desc LysM domain; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id LysM; TPR_1; TPR_11; TPR_14; TPR_2; TPR_8;
pfam_target db:Pfam-A.hmm|PF01476.20 evalue:5.5e-08 score:32.0 best_domain_score:31.0 name:LysM; db:Pfam-A.hmm|PF00515.28 evalue:1.5e-08 score:33.3 best_domain_score:17.0 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:1.4e-08 score:33.5 best_domain_score:18.3 name:TPR_11; db:Pfam-A.hmm|PF13428.6 evalue:5.1e-08 score:32.4 best_domain_score:18.1 name:TPR_14; db:Pfam-A.hmm|PF07719.17 evalue:4.3e-13 score:47.5 best_domain_score:23.5 name:TPR_2; db:Pfam-A.hmm|PF13181.6 evalue:6.3e-07 score:28.4 best_domain_score:15.7 name:TPR_8;
34818 32830 CDS
ID metaerg.pl|05798
allec_ids 6.4.1.4;
allgo_ids GO:0005524; GO:1905202; GO:0005759; GO:0046872; GO:0004485; GO:0006552;
allko_ids K11541; K01965; K01571; K01457; K01955; K01941; K01959; K00382; K01966; K15037; K01954; K11540; K01968; K00609; K01960; K01958; K08289; K03416; K14541; K00658; K01964; K01956;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725102.1 1 661 evalue:3.5e-249 qcov:99.80 identity:68.70;
kegg_pathway_id 00640; 00620; 00330; 00251; 00252; 00220; 00791; 00020; 00240; 00230; 00260; 00670; 00310; 00010; 00280;
kegg_pathway_name Propanoate metabolism; Pyruvate metabolism; Arginine and proline metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Atrazine degradation; Citrate cycle (TCA cycle); Pyrimidine metabolism; Purine metabolism; Glycine, serine and threonine metabolism; One carbon pool by folate; Lysine degradation; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id LEU-DEG2-PWY;
metacyc_pathway_name L-leucine degradation I;;
metacyc_pathway_type LEUCINE-DEG;;
pfam_acc PF02222; PF02785; PF00289; PF00364; PF13533; PF02786; PF07478; PF13437;
pfam_desc ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Biotin-requiring enzyme; Biotin-lipoyl like; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus; HlyD family secretion protein;
pfam_id ATP-grasp; Biotin_carb_C; Biotin_carb_N; Biotin_lipoyl; Biotin_lipoyl_2; CPSase_L_D2; Dala_Dala_lig_C; HlyD_3;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:6.2e-09 score:34.9 best_domain_score:33.9 name:ATP-grasp; db:Pfam-A.hmm|PF02785.19 evalue:6.8e-38 score:128.3 best_domain_score:121.3 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:5.9e-46 score:154.8 best_domain_score:153.3 name:Biotin_carb_N; db:Pfam-A.hmm|PF00364.22 evalue:9.3e-18 score:63.1 best_domain_score:62.0 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:3e-08 score:32.6 best_domain_score:23.2 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF02786.17 evalue:3.3e-74 score:248.2 best_domain_score:247.6 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:1e-11 score:44.0 best_domain_score:42.7 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF13437.6 evalue:4e-06 score:26.7 best_domain_score:12.5 name:HlyD_3;
sprot_desc Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial;
sprot_id sp|Q5I0C3|MCCA_RAT;
sprot_target db:uniprot_sprot|sp|Q5I0C3|MCCA_RAT 5 641 evalue:3.0e-154 qcov:96.20 identity:46.60;
35622 34825 CDS
ID metaerg.pl|05799
allec_ids 4.2.1.-;
allgo_ids GO:0003824; GO:0016829; GO:0009405;
allko_ids K07515; K01825; K10527; K07514; K15016; K13767; K00022; K01692; K01782; K07516;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725103.1 1 259 evalue:1.3e-98 qcov:97.70 identity:73.70;
kegg_pathway_id 00650; 00640; 00592; 00410; 00071; 01040; 00903; 00062; 00380; 00632; 00930; 00281; 00280; 00310;
kegg_pathway_name Butanoate metabolism; Propanoate metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Tryptophan metabolism; Benzoate degradation via CoA ligation; Caprolactam degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id PWY-5184; BENZCOA-PWY; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; CARNMET-PWY; FASYN-ELONG-PWY; PWY-5061; PWY-6007; PWYG-321; PWY-5367; CENTBENZCOA-PWY; PWY-6113; PWY0-881; PWY1A0-6325;
metacyc_pathway_name toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; 4-hydroxyphenylacetate degradation;; L-carnitine degradation I;; fatty acid elongation -- saturated;; 6,7,4'-trihydroxyisoflavone biosynthesis;; (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis II;; mycolate biosynthesis;; petroselinate biosynthesis;; benzoyl-CoA degradation II (anaerobic);; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; actinorhodin biosynthesis;;
metacyc_pathway_type Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; CARN-DEG;; Fatty-acid-biosynthesis;; ISOFLAVONOID-SYN;; DMNT-Biosynthesis;; Fatty-acid-biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Benzoyl-CoA-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Antibiotic-Biosynthesis;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:5.3e-52 score:175.9 best_domain_score:175.6 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:5.1e-31 score:107.6 best_domain_score:107.5 name:ECH_2;
sprot_desc Enoyl-CoA hydratase ACTT6;
sprot_id sp|C5NN19|ACTT6_ALTAL;
sprot_target db:uniprot_sprot|sp|C5NN19|ACTT6_ALTAL 13 251 evalue:4.1e-22 qcov:90.20 identity:32.80;
37309 35705 CDS
ID metaerg.pl|05800
allec_ids 6.4.1.4;
allgo_ids GO:1905202; GO:0005759; GO:0005739; GO:0005524; GO:0004485; GO:0015936; GO:0006552;
allko_ids K01963; K03416; K15052; K01959; K01571; K01966; K15036; K01969;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725104.1 1 534 evalue:2.5e-282 qcov:100.00 identity:89.40;
kegg_pathway_id 00252; 00330; 00620; 00061; 00640; 00253; 00280; 00020;
kegg_pathway_name Alanine and aspartate metabolism; Arginine and proline metabolism; Pyruvate metabolism; Fatty acid biosynthesis; Propanoate metabolism; Tetracycline biosynthesis; Valine, leucine and isoleucine degradation; Citrate cycle (TCA cycle);
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id LEU-DEG2-PWY;
metacyc_pathway_name L-leucine degradation I;;
metacyc_pathway_type LEUCINE-DEG;;
pfam_acc PF01039;
pfam_desc Carboxyl transferase domain;
pfam_id Carboxyl_trans;
pfam_target db:Pfam-A.hmm|PF01039.22 evalue:4.2e-152 score:506.5 best_domain_score:506.1 name:Carboxyl_trans;
sprot_desc Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial;
sprot_id sp|Q3ULD5|MCCB_MOUSE;
sprot_target db:uniprot_sprot|sp|Q3ULD5|MCCB_MOUSE 3 534 evalue:5.8e-201 qcov:99.60 identity:65.00;
37602 37871 CDS
ID metaerg.pl|05801
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02956;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725105.1 1 89 evalue:2.6e-35 qcov:100.00 identity:88.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00312;
pfam_desc Ribosomal protein S15;
pfam_id Ribosomal_S15;
pfam_target db:Pfam-A.hmm|PF00312.22 evalue:1e-37 score:127.4 best_domain_score:127.2 name:Ribosomal_S15;
sprot_desc 30S ribosomal protein S15;
sprot_id sp|Q0A7A0|RS15_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0A7A0|RS15_ALKEH 1 89 evalue:2.6e-29 qcov:100.00 identity:71.90;
tigrfam_acc TIGR00952;
tigrfam_desc ribosomal protein uS15;
tigrfam_mainrole Protein synthesis;
tigrfam_name S15_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00952 evalue:8.8e-39 score:130.9 best_domain_score:130.7 name:TIGR00952;
37988 40090 CDS
ID metaerg.pl|05802
allec_ids 2.7.7.8;
allgo_ids GO:0003723; GO:0005737; GO:0000287; GO:0004654; GO:0006402; GO:0006396;
allko_ids K00962; K03049; K12818; K03022;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725106.1 2 698 evalue:0.0e+00 qcov:99.60 identity:87.70;
kegg_pathway_id 00240; 03020; 00230;
kegg_pathway_name Pyrimidine metabolism; RNA polymerase; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00013; PF03726; PF01138; PF03725; PF00575;
pfam_desc KH domain; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; S1 RNA binding domain;
pfam_id KH_1; PNPase; RNase_PH; RNase_PH_C; S1;
pfam_target db:Pfam-A.hmm|PF00013.29 evalue:3.4e-15 score:54.8 best_domain_score:47.7 name:KH_1; db:Pfam-A.hmm|PF03726.14 evalue:1.3e-18 score:66.5 best_domain_score:65.7 name:PNPase; db:Pfam-A.hmm|PF01138.21 evalue:8e-43 score:145.3 best_domain_score:74.6 name:RNase_PH; db:Pfam-A.hmm|PF03725.15 evalue:2.8e-22 score:77.7 best_domain_score:50.2 name:RNase_PH_C; db:Pfam-A.hmm|PF00575.23 evalue:4.4e-23 score:80.7 best_domain_score:79.5 name:S1;
sprot_desc Polyribonucleotide nucleotidyltransferase;
sprot_id sp|B8GP06|PNP_THISH;
sprot_target db:uniprot_sprot|sp|B8GP06|PNP_THISH 1 691 evalue:1.5e-281 qcov:98.70 identity:71.90;
tigrfam_acc TIGR03591;
tigrfam_desc polyribonucleotide nucleotidyltransferase;
tigrfam_mainrole Transcription;
tigrfam_name polynuc_phos;
tigrfam_sub1role Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR03591 evalue:0 score:1101.5 best_domain_score:1101.4 name:TIGR03591;
40271 40666 CDS
ID metaerg.pl|05803
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725107.1 1 129 evalue:4.6e-44 qcov:98.50 identity:75.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
40749 43106 CDS
ID metaerg.pl|05804
allko_ids K02040;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169481.1 7 777 evalue:1.6e-261 qcov:98.20 identity:60.60;
kegg_pathway_id 02020; 02010;
kegg_pathway_name Two-component system - General; ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF17963; PF17803; PF17892; PF00691;
pfam_desc Bacterial Ig domain; Bacterial cadherin-like domain; Cadherin-like domain; OmpA family;
pfam_id Big_9; Cadherin_4; Cadherin_5; OmpA;
pfam_target db:Pfam-A.hmm|PF17963.1 evalue:1.4e-60 score:201.2 best_domain_score:82.6 name:Big_9; db:Pfam-A.hmm|PF17803.1 evalue:3.1e-39 score:132.7 best_domain_score:53.4 name:Cadherin_4; db:Pfam-A.hmm|PF17892.1 evalue:1.5e-39 score:133.2 best_domain_score:52.4 name:Cadherin_5; db:Pfam-A.hmm|PF00691.20 evalue:1.4e-18 score:66.3 best_domain_score:65.3 name:OmpA;
sp YES;
40749 40805 signal_peptide
ID metaerg.pl|05805
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
44289 43210 CDS
ID metaerg.pl|05806
allec_ids 2.-.-.-;
allgo_ids GO:0016757; GO:0005829; GO:0008713; GO:0008920; GO:0009244;
allko_ids K12982;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725109.1 1 347 evalue:3.2e-132 qcov:96.70 identity:67.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id LPSSYN-PWY; LIPA-CORESYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF01075;
pfam_desc Glycosyltransferase family 9 (heptosyltransferase);
pfam_id Glyco_transf_9;
pfam_target db:Pfam-A.hmm|PF01075.17 evalue:9.1e-35 score:119.4 best_domain_score:119.0 name:Glyco_transf_9;
sprot_desc Lipopolysaccharide core heptosyltransferase OpsX;
sprot_id sp|Q57336|OPSX_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57336|OPSX_HAEIN 8 342 evalue:5.5e-62 qcov:93.30 identity:37.90;
44314 45006 CDS
ID metaerg.pl|05807
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725110.1 11 227 evalue:2.8e-65 qcov:94.30 identity:59.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF01636; PF06293; PF01163;
pfam_desc Phosphotransferase enzyme family; Lipopolysaccharide kinase (Kdo/WaaP) family; RIO1 family;
pfam_id APH; Kdo; RIO1;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:2.6e-06 score:26.8 best_domain_score:19.5 name:APH; db:Pfam-A.hmm|PF06293.14 evalue:4.2e-35 score:120.2 best_domain_score:119.9 name:Kdo; db:Pfam-A.hmm|PF01163.22 evalue:3.9e-08 score:32.3 best_domain_score:31.7 name:RIO1;
47340 45025 CDS
ID metaerg.pl|05808
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725111.1 1 768 evalue:1.2e-269 qcov:99.60 identity:62.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF13654;
pfam_desc AAA domain;
pfam_id AAA_32;
pfam_target db:Pfam-A.hmm|PF13654.6 evalue:3.9e-121 score:404.6 best_domain_score:404.3 name:AAA_32;
48423 47473 CDS
ID metaerg.pl|05809
allec_ids 3.1.1.3;
allgo_ids GO:0009279; GO:0004806; GO:0016042;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169482.1 1 310 evalue:5.0e-113 qcov:98.10 identity:64.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id LIPAS-PWY;
metacyc_pathway_name triacylglycerol degradation;;
metacyc_pathway_type Fatty-Acid-and-Lipid-Degradation;;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:2.8e-28 score:98.5 best_domain_score:75.1 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:9.4e-23 score:81.2 best_domain_score:81.2 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:3.1e-14 score:52.1 best_domain_score:50.4 name:Hydrolase_4;
sp YES;
sprot_desc Lipase 1;
sprot_id sp|Q02104|LIP1_PSYIM;
sprot_target db:uniprot_sprot|sp|Q02104|LIP1_PSYIM 52 300 evalue:7.5e-39 qcov:78.80 identity:35.60;
tm_num 1;
47473 47535 signal_peptide
ID metaerg.pl|05810
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
48423 47473 transmembrane_helix
ID metaerg.pl|05811
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i47476-47535o;
48630 49100 CDS
ID metaerg.pl|05812
allgo_ids GO:1990397; GO:0005887; GO:0022857;
allko_ids K09125;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725113.1 1 156 evalue:2.8e-64 qcov:100.00 identity:79.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF02592;
pfam_desc Putative vitamin uptake transporter;
pfam_id Vut_1;
pfam_target db:Pfam-A.hmm|PF02592.15 evalue:1.2e-33 score:115.7 best_domain_score:107.8 name:Vut_1;
sprot_desc Probable queuosine precursor transporter;
sprot_id sp|P44908|QPTR_HAEIN;
sprot_target db:uniprot_sprot|sp|P44908|QPTR_HAEIN 2 148 evalue:1.3e-20 qcov:94.20 identity:34.60;
tigrfam_acc TIGR00697;
tigrfam_desc conserved hypothetical integral membrane protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00697;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00697 evalue:6.5e-32 score:110.1 best_domain_score:63.5 name:TIGR00697;
tm_num 5;
48630 49100 transmembrane_helix
ID metaerg.pl|05813
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology o48687-48755i48774-48824o48834-48893i48930-48998o49008-49076i;
49093 49968 CDS
ID metaerg.pl|05814
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726989.1 15 291 evalue:2.2e-115 qcov:95.20 identity:76.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:4.3e-40 score:136.3 best_domain_score:72.5 name:EamA;
tm_num 10;
49093 49968 transmembrane_helix
ID metaerg.pl|05815
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology o49102-49155i49192-49260o49288-49356i49375-49434o49447-49506i49543-49602o49645-49704i49741-49809o49822-49890i49903-49962o;
50248 49958 CDS
ID metaerg.pl|05816
allgo_ids GO:0005886;
allko_ids K08998;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725115.1 1 79 evalue:2.1e-30 qcov:82.30 identity:78.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF01809;
pfam_desc Putative membrane protein insertion efficiency factor;
pfam_id YidD;
pfam_target db:Pfam-A.hmm|PF01809.18 evalue:8e-29 score:98.6 best_domain_score:98.3 name:YidD;
sprot_desc Putative membrane protein insertion efficiency factor;
sprot_id sp|Q7WDJ6|YIDD_BORBR;
sprot_target db:uniprot_sprot|sp|Q7WDJ6|YIDD_BORBR 1 79 evalue:2.3e-23 qcov:82.30 identity:57.30;
tigrfam_acc TIGR00278;
tigrfam_desc putative membrane protein insertion efficiency factor;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00278;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00278 evalue:6.9e-31 score:105.1 best_domain_score:104.8 name:TIGR00278;
50327 50755 CDS
ID metaerg.pl|05817
allgo_ids GO:0008270; GO:0005737; GO:0010468;
allko_ids K06204;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169483.1 1 142 evalue:2.4e-67 qcov:100.00 identity:91.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF01258;
pfam_desc Prokaryotic dksA/traR C4-type zinc finger;
pfam_id zf-dskA_traR;
pfam_target db:Pfam-A.hmm|PF01258.17 evalue:1.6e-12 score:46.4 best_domain_score:45.7 name:zf-dskA_traR;
sprot_desc RNA polymerase-binding transcription factor DksA;
sprot_id sp|P0CAU3|DKSA_CAUVC;
sprot_target db:uniprot_sprot|sp|P0CAU3|DKSA_CAUVC 12 140 evalue:1.3e-38 qcov:90.80 identity:60.50;
tigrfam_acc TIGR02420;
tigrfam_desc RNA polymerase-binding protein DksA;
tigrfam_mainrole Regulatory functions;
tigrfam_name dksA;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02420 evalue:1.8e-43 score:146.6 best_domain_score:146.4 name:TIGR02420;
50967 51977 CDS
ID metaerg.pl|05818
allgo_ids GO:0009279; GO:0046930; GO:0015288; GO:0006811;
allko_ids K02040;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725117.1 4 335 evalue:8.6e-95 qcov:98.80 identity:54.40;
kegg_pathway_id 02010; 02020;
kegg_pathway_name ABC transporters - General; Two-component system - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00691; PF13505; PF05736;
pfam_desc OmpA family; Outer membrane protein beta-barrel domain; OprF membrane domain;
pfam_id OmpA; OMP_b-brl; OprF;
pfam_target db:Pfam-A.hmm|PF00691.20 evalue:1.5e-24 score:85.4 best_domain_score:84.8 name:OmpA; db:Pfam-A.hmm|PF13505.6 evalue:4.5e-09 score:35.9 best_domain_score:35.2 name:OMP_b-brl; db:Pfam-A.hmm|PF05736.11 evalue:8.5e-08 score:31.4 best_domain_score:30.8 name:OprF;
sp YES;
sprot_desc Outer membrane porin F;
sprot_id sp|P37726|PORF_PSEFL;
sprot_target db:uniprot_sprot|sp|P37726|PORF_PSEFL 40 330 evalue:2.1e-15 qcov:86.60 identity:39.30;
50967 51029 signal_peptide
ID metaerg.pl|05819
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
52590 52153 CDS
ID metaerg.pl|05820
allgo_ids GO:0005737; GO:0016226;
allko_ids K02426;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725118.1 1 138 evalue:5.8e-48 qcov:95.20 identity:71.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF02657;
pfam_desc Fe-S metabolism associated domain;
pfam_id SufE;
pfam_target db:Pfam-A.hmm|PF02657.15 evalue:6.2e-45 score:151.2 best_domain_score:151.0 name:SufE;
sprot_desc Cysteine desulfuration protein SufE;
sprot_id sp|Q7N3U6|SUFE_PHOLL;
sprot_target db:uniprot_sprot|sp|Q7N3U6|SUFE_PHOLL 9 130 evalue:4.2e-21 qcov:84.10 identity:41.90;
53966 52587 CDS
ID metaerg.pl|05821
allec_ids 6.1.1.16;
allgo_ids GO:0000166; GO:0004817; GO:0005524; GO:0005737; GO:0006423; GO:0008270;
allko_ids K01883;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725119.1 1 459 evalue:1.5e-211 qcov:100.00 identity:78.00;
kegg_pathway_id 00272; 00970;
kegg_pathway_name Cysteine metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF09190; PF00133; PF01406; PF09334;
pfam_desc DALR domain; tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (C) catalytic domain; tRNA synthetases class I (M);
pfam_id DALR_2; tRNA-synt_1; tRNA-synt_1e; tRNA-synt_1g;
pfam_target db:Pfam-A.hmm|PF09190.11 evalue:3.7e-12 score:45.8 best_domain_score:44.4 name:DALR_2; db:Pfam-A.hmm|PF00133.22 evalue:8.2e-06 score:23.6 best_domain_score:22.6 name:tRNA-synt_1; db:Pfam-A.hmm|PF01406.19 evalue:9.8e-119 score:395.4 best_domain_score:395.0 name:tRNA-synt_1e; db:Pfam-A.hmm|PF09334.11 evalue:8.7e-11 score:40.4 best_domain_score:25.1 name:tRNA-synt_1g;
sprot_desc Cysteine--tRNA ligase;
sprot_id sp|A7HWJ0|SYC_PARL1;
sprot_target db:uniprot_sprot|sp|A7HWJ0|SYC_PARL1 1 458 evalue:1.8e-158 qcov:99.80 identity:61.20;
tigrfam_acc TIGR00435;
tigrfam_desc cysteine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name cysS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00435 evalue:6.5e-152 score:506.0 best_domain_score:505.7 name:TIGR00435;
54034 55359 CDS
ID metaerg.pl|05822
allec_ids 3.4.13.9;
allgo_ids GO:0046872; GO:0008235; GO:0016795; GO:0102009;
allko_ids K01271;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725120.1 1 435 evalue:6.2e-178 qcov:98.60 identity:68.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00557;
pfam_desc Metallopeptidase family M24;
pfam_id Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF00557.24 evalue:1.5e-40 score:138.3 best_domain_score:138.0 name:Peptidase_M24;
sprot_desc Xaa-Pro dipeptidase;
sprot_id sp|Q4UY33|PEPQ_XANC8;
sprot_target db:uniprot_sprot|sp|Q4UY33|PEPQ_XANC8 6 439 evalue:7.4e-101 qcov:98.40 identity:43.70;
55388 58606 CDS
ID metaerg.pl|05823
allko_ids K04486; K13533; K07676; K01769; K07709; K07675; K07710; K07636; K11527;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Thauera;s__Thauera propionica;
genomedb_acc GCF_002245655.1;
genomedb_target db:genomedb|GCF_002245655.1|WP_094268018.1 31 1049 evalue:4.2e-196 qcov:95.10 identity:41.30;
kegg_pathway_id 00340; 00230; 02020;
kegg_pathway_name Histidine metabolism; Purine metabolism; Two-component system - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00563; PF00990; PF08448; PF13188; PF12974;
pfam_desc EAL domain; Diguanylate cyclase, GGDEF domain; PAS fold; PAS domain; ABC transporter, phosphonate, periplasmic substrate-binding protein;
pfam_id EAL; GGDEF; PAS_4; PAS_8; Phosphonate-bd;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:9.9e-67 score:224.1 best_domain_score:223.0 name:EAL; db:Pfam-A.hmm|PF00990.21 evalue:7.6e-52 score:174.5 best_domain_score:173.7 name:GGDEF; db:Pfam-A.hmm|PF08448.10 evalue:1.8e-07 score:30.7 best_domain_score:26.1 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:2.1e-07 score:30.1 best_domain_score:28.0 name:PAS_8; db:Pfam-A.hmm|PF12974.7 evalue:1.9e-39 score:135.0 best_domain_score:134.2 name:Phosphonate-bd;
sp YES;
tigrfam_acc TIGR00229; TIGR00254;
tigrfam_desc PAS domain S-box protein; diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Regulatory functions; Signal transduction;
tigrfam_name sensory_box; GGDEF;
tigrfam_sub1role Small molecule interactions; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.1e-16 score:60.3 best_domain_score:46.3 name:TIGR00229; db:TIGRFAMs.hmm|TIGR00254 evalue:8.7e-48 score:161.3 best_domain_score:160.6 name:TIGR00254;
55388 55519 signal_peptide
ID metaerg.pl|05824
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
58626 61295 CDS
ID metaerg.pl|05825
allec_ids 4.2.1.117; 4.2.1.99;
allgo_ids GO:0005829; GO:0051539; GO:0003994; GO:0016836; GO:0046872; GO:0006101; GO:0019629; GO:0019679; GO:0006099;
allko_ids K01704; K01705; K01702; K01681; K01703; K01682; K20455;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725126.1 26 889 evalue:0.0e+00 qcov:97.20 identity:85.40;
kegg_pathway_id 00630; 00300; 00020; 00290; 00720;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Lysine biosynthesis; Citrate cycle (TCA cycle); Valine, leucine and isoleucine biosynthesis; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id PWY-5747; PWY0-42;
metacyc_pathway_name 2-methylcitrate cycle II;; 2-methylcitrate cycle I;;
metacyc_pathway_type Methyl-Citrate-Cycle;; Methyl-Citrate-Cycle;;
pfam_acc PF00330; PF00694;
pfam_desc Aconitase family (aconitate hydratase); Aconitase C-terminal domain;
pfam_id Aconitase; Aconitase_C;
pfam_target db:Pfam-A.hmm|PF00330.20 evalue:2.8e-144 score:480.8 best_domain_score:480.4 name:Aconitase; db:Pfam-A.hmm|PF00694.19 evalue:4.1e-30 score:104.0 best_domain_score:103.2 name:Aconitase_C;
sprot_desc 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming);
sprot_id sp|Q8EJW3|ACND_SHEON;
sprot_target db:uniprot_sprot|sp|Q8EJW3|ACND_SHEON 25 884 evalue:0.0e+00 qcov:96.70 identity:77.10;
tigrfam_acc TIGR02333;
tigrfam_desc 2-methylisocitrate dehydratase, Fe/S-dependent;
tigrfam_name 2met_isocit_dHY;
tigrfam_target db:TIGRFAMs.hmm|TIGR02333 evalue:0 score:1672.3 best_domain_score:1672.1 name:TIGR02333;
61460 61771 CDS
ID metaerg.pl|05826
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
sp YES;
tm_num 1;
61460 61504 lipoprotein_signal_peptide
ID metaerg.pl|05827
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
61460 61771 transmembrane_helix
ID metaerg.pl|05828
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i61478-61546o;
62847 61738 CDS
ID metaerg.pl|05829
allec_ids 2.3.1.31;
allgo_ids GO:0005737; GO:0004414; GO:0009086;
allko_ids K00641;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Solimonas;s__Solimonas aquatica;
genomedb_acc GCF_900111015.1;
genomedb_target db:genomedb|GCF_900111015.1|WP_093284363.1 10 334 evalue:1.2e-78 qcov:88.10 identity:50.20;
kegg_pathway_id 00271; 00920;
kegg_pathway_name Methionine metabolism; Sulfur metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id PWY-6293; PWY-821; PWY-5344; PWY-5345;
metacyc_pathway_name superpathway of L-cysteine biosynthesis (fungi);; superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae);; L-homocysteine biosynthesis;; superpathway of L-methionine biosynthesis (by sulfhydrylation);;
metacyc_pathway_type CYSTEINE-SYN; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis;; Methionine-De-novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00561;
pfam_desc alpha/beta hydrolase fold;
pfam_id Abhydrolase_1;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:2e-20 score:72.8 best_domain_score:67.1 name:Abhydrolase_1;
sprot_desc Homoserine O-acetyltransferase;
sprot_id sp|Q3M5Q6|METXA_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M5Q6|METXA_ANAVT 13 326 evalue:1.6e-72 qcov:85.10 identity:44.40;
tigrfam_acc TIGR01392;
tigrfam_desc homoserine O-acetyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name homoserO_Ac_trn;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01392 evalue:1.6e-90 score:302.8 best_domain_score:298.6 name:TIGR01392;
64166 62844 CDS
ID metaerg.pl|05830
allec_ids 2.5.1.49;
allgo_ids GO:0009058; GO:0030170; GO:0003961; GO:0019344; GO:0006534;
allko_ids K01740; K17069;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Thermosynechococcales;f__Thermosynechococcaceae;g__Cyanothece;s__Cyanothece sp000022045;
genomedb_acc GCF_000022045.1;
genomedb_target db:genomedb|GCF_000022045.1|WP_012628275.1 6 435 evalue:3.0e-196 qcov:97.70 identity:75.80;
kegg_pathway_id 00271; 00272;
kegg_pathway_name Methionine metabolism; Cysteine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id PWY-6293; PWY-5344; PWY-821; PWY-5345;
metacyc_pathway_name superpathway of L-cysteine biosynthesis (fungi);; L-homocysteine biosynthesis;; superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae);; superpathway of L-methionine biosynthesis (by sulfhydrylation);;
metacyc_pathway_type CYSTEINE-SYN; Super-Pathways;; Other-Amino-Acid-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00155; PF00266; PF01053; PF01041;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Cys/Met metabolism PLP-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; Aminotran_5; Cys_Met_Meta_PP; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1.7e-09 score:36.6 best_domain_score:36.0 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:4.6e-05 score:21.8 best_domain_score:21.0 name:Aminotran_5; db:Pfam-A.hmm|PF01053.20 evalue:2.2e-141 score:470.1 best_domain_score:469.9 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF01041.17 evalue:3.8e-07 score:29.0 best_domain_score:27.5 name:DegT_DnrJ_EryC1;
sprot_desc Homocysteine synthase;
sprot_id sp|P50125|CYSD_EMENI;
sprot_target db:uniprot_sprot|sp|P50125|CYSD_EMENI 1 431 evalue:1.4e-160 qcov:98.00 identity:62.40;
tigrfam_acc TIGR01326;
tigrfam_desc O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name OAH_OAS_sulfhy;
tigrfam_sub1role Serine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01326 evalue:5.1e-207 score:686.7 best_domain_score:686.6 name:TIGR01326;
64609 65307 CDS
ID metaerg.pl|05831
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
sp YES;
64609 64665 lipoprotein_signal_peptide
ID metaerg.pl|05832
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
65411 66583 CDS
ID metaerg.pl|05833
allec_ids 5.3.3.-;
allgo_ids GO:0016863; GO:0019629;
allko_ids K09788;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax sp002389055;
genomedb_acc GCA_002389055.1;
genomedb_target db:genomedb|GCA_002389055.1|DGNT01000045.1_3 1 387 evalue:2.8e-166 qcov:99.20 identity:75.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF04303;
pfam_desc PrpF protein;
pfam_id PrpF;
pfam_target db:Pfam-A.hmm|PF04303.13 evalue:1.6e-163 score:543.2 best_domain_score:543.0 name:PrpF;
sprot_desc 2-methyl-aconitate isomerase;
sprot_id sp|Q8EJW4|PRPF_SHEON;
sprot_target db:uniprot_sprot|sp|Q8EJW4|PRPF_SHEON 6 387 evalue:4.4e-158 qcov:97.90 identity:71.10;
tigrfam_acc TIGR02334;
tigrfam_desc probable AcnD-accessory protein PrpF;
tigrfam_mainrole Energy metabolism;
tigrfam_name prpF;
tigrfam_sub1role Fermentation;
tigrfam_target db:TIGRFAMs.hmm|TIGR02334 evalue:1e-204 score:678.8 best_domain_score:678.5 name:TIGR02334;
tm_num 1;
65411 66583 transmembrane_helix
ID metaerg.pl|05834
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology o66347-66415i;
67321 66644 CDS
ID metaerg.pl|05835
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Microcystaceae;g__Microcystis;s__Microcystis aeruginosa_C;
genomedb_acc GCF_000981785.2;
genomedb_target db:genomedb|GCF_000981785.2|WP_046661903.1 22 218 evalue:3.6e-20 qcov:87.60 identity:38.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
sp YES;
tm_num 2;
66644 66724 signal_peptide
ID metaerg.pl|05836
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
67321 66644 transmembrane_helix
ID metaerg.pl|05837
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i66662-66730o67232-67300i;
67549 68463 CDS
ID metaerg.pl|05838
allgo_ids GO:0016020; GO:0030001; GO:0046873; GO:0055085; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Ectothiorhodospira;s__Ectothiorhodospira sp001632845;
genomedb_acc GCF_001632845.1;
genomedb_target db:genomedb|GCF_001632845.1|WP_063463596.1 1 304 evalue:4.0e-99 qcov:100.00 identity:61.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF02535;
pfam_desc ZIP Zinc transporter;
pfam_id Zip;
pfam_target db:Pfam-A.hmm|PF02535.22 evalue:8.1e-20 score:70.5 best_domain_score:63.4 name:Zip;
sprot_desc hypothetical protein;
sprot_id sp|Q06916|GUFA_MYXXA;
sprot_target db:uniprot_sprot|sp|Q06916|GUFA_MYXXA 54 304 evalue:1.8e-37 qcov:82.60 identity:47.00;
tm_num 9;
67549 68463 transmembrane_helix
ID metaerg.pl|05839
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i67594-67662o67705-67773i67810-67878o67906-67974i68035-68103o68131-68199i68218-68286o68299-68367i68404-68457o;
68513 68914 CDS
ID metaerg.pl|05840
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169511.1 1 133 evalue:1.6e-31 qcov:100.00 identity:57.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF04241;
pfam_desc Protein of unknown function (DUF423);
pfam_id DUF423;
pfam_target db:Pfam-A.hmm|PF04241.15 evalue:2.1e-20 score:71.9 best_domain_score:71.4 name:DUF423;
sp YES;
tm_num 4;
68513 68578 signal_peptide
ID metaerg.pl|05841
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
68513 68914 transmembrane_helix
ID metaerg.pl|05842
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i68525-68590o68633-68701i68735-68803o68813-68881i;
68925 69725 CDS
ID metaerg.pl|05843
allec_ids 3.2.2.-;
allgo_ids GO:0003684; GO:0003906; GO:0006289; GO:0008270; GO:0016799; GO:0140078; GO:0004519; GO:0000703; GO:0006284;
allko_ids K10563; K05522;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169864.1 1 265 evalue:2.2e-101 qcov:99.60 identity:68.70;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id PWY-2681; PWY-5381;
metacyc_pathway_name trans-zeatin biosynthesis;; pyridine nucleotide cycling (plants);;
metacyc_pathway_type CYTOKININ-BIOSYNTHESIS;; NAD-Metabolism;;
pfam_acc PF06831;
pfam_desc Formamidopyrimidine-DNA glycosylase H2TH domain;
pfam_id H2TH;
pfam_target db:Pfam-A.hmm|PF06831.14 evalue:1.7e-12 score:46.4 best_domain_score:45.4 name:H2TH;
sprot_desc Endonuclease 8;
sprot_id sp|B5QWF8|END8_SALEP;
sprot_target db:uniprot_sprot|sp|B5QWF8|END8_SALEP 3 265 evalue:3.9e-49 qcov:98.90 identity:39.90;
69762 70112 CDS
ID metaerg.pl|05844
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax_A;s__Alcanivorax_A sp003259185;
genomedb_acc GCF_003259185.1;
genomedb_target db:genomedb|GCF_003259185.1|WP_111655797.1 1 104 evalue:9.4e-09 qcov:89.70 identity:32.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
tm_num 1;
69762 70112 transmembrane_helix
ID metaerg.pl|05845
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i70038-70106o;
70481 71842 CDS
ID metaerg.pl|05846
allgo_ids GO:0005737; GO:0005615; GO:0004867; GO:0010951;
allko_ids K13963;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__SW121;s__SW121 sp003259155;
genomedb_acc GCF_003259155.1;
genomedb_target db:genomedb|GCF_003259155.1|WP_111640470.1 14 452 evalue:4.7e-104 qcov:96.90 identity:47.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00079;
pfam_desc Serpin (serine protease inhibitor);
pfam_id Serpin;
pfam_target db:Pfam-A.hmm|PF00079.20 evalue:5.9e-108 score:360.7 best_domain_score:360.4 name:Serpin;
sp YES;
sprot_desc Leukocyte elastase inhibitor;
sprot_id sp|P05619|ILEU_HORSE;
sprot_target db:uniprot_sprot|sp|P05619|ILEU_HORSE 64 452 evalue:5.1e-57 qcov:85.90 identity:35.10;
70481 70531 lipoprotein_signal_peptide
ID metaerg.pl|05847
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
73303 71921 CDS
ID metaerg.pl|05848
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725204.1 7 460 evalue:4.4e-158 qcov:98.70 identity:62.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF01882;
pfam_desc Protein of unknown function DUF58;
pfam_id DUF58;
pfam_target db:Pfam-A.hmm|PF01882.18 evalue:1.9e-23 score:81.8 best_domain_score:76.3 name:DUF58;
tm_num 1;
73303 71921 transmembrane_helix
ID metaerg.pl|05849
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i71996-72055o;
74295 73300 CDS
ID metaerg.pl|05850
allgo_ids GO:0005524; GO:0016887;
allko_ids K03924;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725205.1 4 331 evalue:1.5e-136 qcov:99.10 identity:77.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF07726; PF07728; PF17863; PF00493; PF00158;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); AAA lid domain; MCM P-loop domain; Sigma-54 interaction domain;
pfam_id AAA_3; AAA_5; AAA_lid_2; MCM; Sigma54_activat;
pfam_target db:Pfam-A.hmm|PF07726.11 evalue:7.6e-64 score:212.7 best_domain_score:212.0 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:9.5e-14 score:50.8 best_domain_score:49.6 name:AAA_5; db:Pfam-A.hmm|PF17863.1 evalue:8.9e-18 score:63.2 best_domain_score:62.0 name:AAA_lid_2; db:Pfam-A.hmm|PF00493.23 evalue:1.4e-05 score:23.5 best_domain_score:22.7 name:MCM; db:Pfam-A.hmm|PF00158.26 evalue:5.8e-05 score:22.1 best_domain_score:16.3 name:Sigma54_activat;
sprot_desc hypothetical protein;
sprot_id sp|P94474|YEAC_BACSU;
sprot_target db:uniprot_sprot|sp|P94474|YEAC_BACSU 22 331 evalue:1.3e-70 qcov:93.70 identity:43.20;
75464 74292 CDS
ID metaerg.pl|05851
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725206.1 2 385 evalue:2.2e-70 qcov:98.50 identity:39.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
tm_num 2;
75464 74292 transmembrane_helix
ID metaerg.pl|05852
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i74310-74363o75045-75113i;
76261 75461 CDS
ID metaerg.pl|05853
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas koreensis;
genomedb_acc GCF_001431525.1;
genomedb_target db:genomedb|GCF_001431525.1|WP_057665072.1 16 251 evalue:4.4e-09 qcov:88.70 identity:28.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
sp YES;
tm_num 2;
75461 75538 signal_peptide
ID metaerg.pl|05854
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
76261 75461 transmembrane_helix
ID metaerg.pl|05855
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i75479-75532o75770-75838i;
77016 76258 CDS
ID metaerg.pl|05856
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725208.1 3 245 evalue:3.7e-58 qcov:96.40 identity:50.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
tm_num 3;
77016 76258 transmembrane_helix
ID metaerg.pl|05857
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i76345-76413o76708-76776i76837-76905o;
77971 77006 CDS
ID metaerg.pl|05858
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725209.1 1 321 evalue:2.3e-113 qcov:100.00 identity:67.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF01944;
pfam_desc Stage II sporulation protein M;
pfam_id SpoIIM;
pfam_target db:Pfam-A.hmm|PF01944.17 evalue:1.2e-32 score:112.3 best_domain_score:111.5 name:SpoIIM;
tm_num 6;
77971 77006 transmembrane_helix
ID metaerg.pl|05859
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i77306-77374o77480-77548i77561-77629o77672-77740i77798-77857o77885-77938i;
78660 77968 CDS
ID metaerg.pl|05860
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169512.1 4 227 evalue:5.0e-70 qcov:97.40 identity:63.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF06271;
pfam_desc RDD family;
pfam_id RDD;
pfam_target db:Pfam-A.hmm|PF06271.12 evalue:3e-19 score:68.9 best_domain_score:68.5 name:RDD;
tm_num 1;
78660 77968 transmembrane_helix
ID metaerg.pl|05861
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i78094-78162o;
79458 78670 CDS
ID metaerg.pl|05862
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725211.1 1 257 evalue:8.3e-53 qcov:98.10 identity:45.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
tm_num 4;
79458 78670 transmembrane_helix
ID metaerg.pl|05863
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology o78829-78897i79045-79113o79141-79245i79306-79374o;
80606 79455 CDS
ID metaerg.pl|05864
allec_ids 2.1.2.-;
allgo_ids GO:0005524; GO:0050662; GO:0000287; GO:0043815; GO:0004644; GO:0006189;
allko_ids K01589; K08289;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725212.1 1 376 evalue:3.3e-167 qcov:98.20 identity:79.50;
kegg_pathway_id 00230; 00670;
kegg_pathway_name Purine metabolism; One carbon pool by folate;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
metacyc_pathway_id PRPP-PWY; PWY-6277; DENOVOPURINE2-PWY; PWY-6122;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis II;;
metacyc_pathway_type Super-Pathways;; AIR-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;;
pfam_acc PF02222; PF02786; PF07478;
pfam_desc ATP-grasp domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus;
pfam_id ATP-grasp; CPSase_L_D2; Dala_Dala_lig_C;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:1.2e-55 score:187.0 best_domain_score:186.4 name:ATP-grasp; db:Pfam-A.hmm|PF02786.17 evalue:3.9e-06 score:25.7 best_domain_score:24.8 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:4.8e-06 score:25.5 best_domain_score:23.1 name:Dala_Dala_lig_C;
sprot_desc Formate-dependent phosphoribosylglycinamide formyltransferase;
sprot_id sp|B7UYK0|PURT_PSEA8;
sprot_target db:uniprot_sprot|sp|B7UYK0|PURT_PSEA8 1 378 evalue:3.3e-158 qcov:98.70 identity:73.50;
tigrfam_acc TIGR01142;
tigrfam_desc phosphoribosylglycinamide formyltransferase 2;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purT;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01142 evalue:1.8e-184 score:612.1 best_domain_score:611.9 name:TIGR01142;
82262 80724 CDS
ID metaerg.pl|05865
allgo_ids GO:0005525;
genomedb_OC d__Bacteria;p__Desulfobacterota_A;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfonatronaceae;g__Desulfonatronum;s__Desulfonatronum thiosulfatophilum;
genomedb_acc GCF_900104215.1;
genomedb_target db:genomedb|GCF_900104215.1|WP_092121778.1 4 502 evalue:3.6e-129 qcov:97.50 identity:47.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00350; PF01926;
pfam_desc Dynamin family; 50S ribosome-binding GTPase;
pfam_id Dynamin_N; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00350.23 evalue:4.1e-08 score:32.7 best_domain_score:18.8 name:Dynamin_N; db:Pfam-A.hmm|PF01926.23 evalue:9.2e-15 score:54.0 best_domain_score:53.0 name:MMR_HSR1;
tm_num 2;
82262 80724 transmembrane_helix
ID metaerg.pl|05866
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i80760-80828o80841-80909i;
83515 82259 CDS
ID metaerg.pl|05867
allgo_ids GO:0005525;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiocapsa;s__Thiocapsa roseopersicina;
genomedb_acc GCF_900106925.1;
genomedb_target db:genomedb|GCF_900106925.1|WP_093038428.1 22 410 evalue:5.8e-125 qcov:93.10 identity:58.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF05128; PF01926;
pfam_desc Domain of unknown function (DUF697) ; 50S ribosome-binding GTPase;
pfam_id DUF697; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF05128.12 evalue:1.9e-08 score:33.4 best_domain_score:32.6 name:DUF697; db:Pfam-A.hmm|PF01926.23 evalue:9.3e-07 score:28.2 best_domain_score:27.4 name:MMR_HSR1;
85918 83681 CDS
ID metaerg.pl|05868
allec_ids 3.4.14.5;
allgo_ids GO:0016787; GO:0005737; GO:0042597; GO:0008239; GO:0042802; GO:0042803; GO:0008236; GO:0051603;
allko_ids K01303; K01044; K03928; K01730;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169516.1 6 743 evalue:0.0e+00 qcov:99.10 identity:71.20;
kegg_pathway_id 00983; 00040; 00960;
kegg_pathway_name Drug metabolism - other enzymes; Pentose and glucuronate interconversions; Alkaloid biosynthesis II;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00561; PF05448; PF08840; PF01738; PF00930; PF00756; PF12146; PF07676; PF02129; PF00326;
pfam_desc alpha/beta hydrolase fold; Acetyl xylan esterase (AXE1); BAAT / Acyl-CoA thioester hydrolase C terminal; Dienelactone hydrolase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; Putative esterase; Serine aminopeptidase, S33; WD40-like Beta Propeller Repeat; X-Pro dipeptidyl-peptidase (S15 family); Prolyl oligopeptidase family;
pfam_id Abhydrolase_1; AXE1; BAAT_C; DLH; DPPIV_N; Esterase; Hydrolase_4; PD40; Peptidase_S15; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:8.3e-07 score:28.1 best_domain_score:27.2 name:Abhydrolase_1; db:Pfam-A.hmm|PF05448.12 evalue:8e-05 score:20.7 best_domain_score:19.2 name:AXE1; db:Pfam-A.hmm|PF08840.11 evalue:2.5e-07 score:30.1 best_domain_score:24.4 name:BAAT_C; db:Pfam-A.hmm|PF01738.18 evalue:1.1e-08 score:34.2 best_domain_score:33.0 name:DLH; db:Pfam-A.hmm|PF00930.21 evalue:7.7e-90 score:300.4 best_domain_score:296.0 name:DPPIV_N; db:Pfam-A.hmm|PF00756.20 evalue:1.9e-06 score:27.0 best_domain_score:25.3 name:Esterase; db:Pfam-A.hmm|PF12146.8 evalue:1.9e-07 score:29.8 best_domain_score:24.4 name:Hydrolase_4; db:Pfam-A.hmm|PF07676.12 evalue:8.7e-05 score:21.6 best_domain_score:10.6 name:PD40; db:Pfam-A.hmm|PF02129.18 evalue:2e-13 score:49.8 best_domain_score:42.1 name:Peptidase_S15; db:Pfam-A.hmm|PF00326.21 evalue:2.2e-54 score:183.4 best_domain_score:182.8 name:Peptidase_S9;
sp YES;
sprot_desc Dipeptidyl aminopeptidase 4;
sprot_id sp|Q6F3I7|DAP4_PSEMX;
sprot_target db:uniprot_sprot|sp|Q6F3I7|DAP4_PSEMX 5 743 evalue:8.1e-201 qcov:99.20 identity:48.90;
83681 83737 signal_peptide
ID metaerg.pl|05869
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
88429 86156 CDS
ID metaerg.pl|05870
allec_ids 3.5.1.11;
allgo_ids GO:0016787; GO:0017000; GO:0008953; GO:0046677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38454.1 4 755 evalue:2.8e-255 qcov:99.30 identity:56.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF01804;
pfam_desc Penicillin amidase;
pfam_id Penicil_amidase;
pfam_target db:Pfam-A.hmm|PF01804.18 evalue:2.2e-161 score:538.4 best_domain_score:538.2 name:Penicil_amidase;
sprot_desc Penicillin acylase 2 proenzyme;
sprot_id sp|P15558|PAC2_PSES3;
sprot_target db:uniprot_sprot|sp|P15558|PAC2_PSES3 45 754 evalue:3.3e-56 qcov:93.80 identity:27.20;
tm_num 1;
88429 86156 transmembrane_helix
ID metaerg.pl|05871
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i86189-86248o;
89678 88434 CDS
ID metaerg.pl|05872
allgo_ids GO:0000160;
allko_ids K11640; K11356; K02484; K00760; K07642; K11711; K02491; K13490; K11231; K01937; K08282; K10909; K07704; K07645; K07708; K07677; K07652; K08475; K07639; K01120; K07673; K07641; K07646; K07637; K03407; K07682; K07654; K07718; K07651; K07648; K07679; K02478; K07711; K00873; K08884; K07768; K02575; K07778; K11354; K07644; K07709; K06379; K07676; K10681; K07650; K07675; K07717; K07647; K10125; K11357; K04757; K07769; K12767; K02486; K13761; K11383; K01768; K07710; K07716; K02489; K10916; K08479; K03388; K02668; K10715; K07678; K11527; K02030; K07636; K07653; K02480; K02482; K14489;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726993.1 1 403 evalue:6.1e-167 qcov:97.30 identity:73.40;
kegg_pathway_id 00710; 00010; 00983; 00230; 05111; 00240; 02020; 04011; 00620; 03090; 00790;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Drug metabolism - other enzymes; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00990; PF00072;
pfam_desc Diguanylate cyclase, GGDEF domain; Response regulator receiver domain;
pfam_id GGDEF; Response_reg;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:5.8e-41 score:139.2 best_domain_score:138.3 name:GGDEF; db:Pfam-A.hmm|PF00072.24 evalue:3.5e-36 score:123.0 best_domain_score:75.4 name:Response_reg;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:1.4e-47 score:160.6 best_domain_score:159.9 name:TIGR00254;
89917 90483 CDS
ID metaerg.pl|05873
allgo_ids GO:0003746; GO:0006414; GO:0005737;
allko_ids K02356;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725229.1 1 188 evalue:2.7e-82 qcov:100.00 identity:81.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF01132; PF08207; PF09285;
pfam_desc Elongation factor P (EF-P) OB domain; Elongation factor P (EF-P) KOW-like domain; Elongation factor P, C-terminal;
pfam_id EFP; EFP_N; Elong-fact-P_C;
pfam_target db:Pfam-A.hmm|PF01132.20 evalue:1.1e-14 score:53.4 best_domain_score:51.7 name:EFP; db:Pfam-A.hmm|PF08207.12 evalue:1.2e-11 score:43.7 best_domain_score:42.8 name:EFP_N; db:Pfam-A.hmm|PF09285.11 evalue:9.4e-23 score:79.0 best_domain_score:78.3 name:Elong-fact-P_C;
sprot_desc Elongation factor P-like protein;
sprot_id sp|Q3BUD7|EFPL_XANC5;
sprot_target db:uniprot_sprot|sp|Q3BUD7|EFPL_XANC5 3 188 evalue:9.2e-53 qcov:98.90 identity:52.70;
90483 91595 CDS
ID metaerg.pl|05874
allgo_ids GO:0046417;
allko_ids K04518; K04516; K01850; K01626; K04517; K01713; K00210; K13853; K04093; K04092; K03856; K14170; K14187;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725230.1 9 368 evalue:8.5e-120 qcov:97.30 identity:64.70;
kegg_pathway_id 00401; 00400;
kegg_pathway_name Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF01817; PF02153;
pfam_desc Chorismate mutase type II; Prephenate dehydrogenase;
pfam_id CM_2; PDH;
pfam_target db:Pfam-A.hmm|PF01817.21 evalue:4e-15 score:55.2 best_domain_score:55.2 name:CM_2; db:Pfam-A.hmm|PF02153.17 evalue:5.6e-25 score:87.0 best_domain_score:85.5 name:PDH;
92859 91714 CDS
ID metaerg.pl|05875
allec_ids 1.3.8.4;
allgo_ids GO:0016627; GO:0055114; GO:0005759; GO:0005739; GO:0005524; GO:0050660; GO:0008470; GO:0006552;
allko_ids K06446; K00253; K00248; K11410; K09478; K00120; K00232; K00252; K14448; K00249; K11731; K11538; K08098;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725234.1 1 379 evalue:1.1e-199 qcov:99.50 identity:90.80;
kegg_pathway_id 00650; 00640; 00592; 01040; 00903; 00361; 00632; 00380; 00071; 00410; 00930; 00624; 00310; 00280; 01031; 00626;
kegg_pathway_name Butanoate metabolism; Propanoate metabolism; alpha-Linolenic acid metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; gamma-Hexachlorocyclohexane degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Fatty acid metabolism; beta-Alanine metabolism; Caprolactam degradation; 1- and 2-Methylnaphthalene degradation; Lysine degradation; Valine, leucine and isoleucine degradation; Glycan structures - biosynthesis 2; Naphthalene and anthracene degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:2.7e-38 score:130.8 best_domain_score:129.9 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:2.1e-12 score:46.7 best_domain_score:45.9 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:2.3e-23 score:81.5 best_domain_score:80.4 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:2.4e-38 score:130.5 best_domain_score:129.3 name:Acyl-CoA_dh_N;
sprot_desc Isovaleryl-CoA dehydrogenase, mitochondrial;
sprot_id sp|Q75IM9|IVD_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q75IM9|IVD_ORYSJ 8 379 evalue:5.5e-129 qcov:97.60 identity:62.00;
94073 92970 CDS
ID metaerg.pl|05876
allec_ids 1.4.1.9;
allgo_ids GO:0006520; GO:0016491; GO:0055114; GO:0050049; GO:0006552;
allko_ids K00263; K00270;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725235.1 1 367 evalue:2.9e-205 qcov:100.00 identity:95.40;
kegg_pathway_id 00290; 00280; 00360; 00400;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Phenylalanine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00670; PF00208; PF02812;
pfam_desc S-adenosyl-L-homocysteine hydrolase, NAD binding domain; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id AdoHcyase_NAD; ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF00670.21 evalue:1.4e-05 score:24.4 best_domain_score:23.6 name:AdoHcyase_NAD; db:Pfam-A.hmm|PF00208.21 evalue:4.9e-14 score:51.9 best_domain_score:36.3 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:3.8e-29 score:100.4 best_domain_score:98.6 name:ELFV_dehydrog_N;
sprot_desc Leucine dehydrogenase;
sprot_id sp|P13154|DHLE_GEOSE;
sprot_target db:uniprot_sprot|sp|P13154|DHLE_GEOSE 1 364 evalue:7.2e-118 qcov:99.20 identity:55.30;
94914 94369 CDS
ID metaerg.pl|05877
genomedb_OC d__Bacteria;p__Desulfobacterota_A;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfonatronaceae;g__Desulfonatronum;s__Desulfonatronum thioautotrophicum;
genomedb_acc GCF_000934745.1;
genomedb_target db:genomedb|GCF_000934745.1|WP_045220933.1 37 181 evalue:3.7e-28 qcov:80.10 identity:45.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF02635;
pfam_desc DsrE/DsrF-like family;
pfam_id DrsE;
pfam_target db:Pfam-A.hmm|PF02635.15 evalue:1.8e-05 score:24.3 best_domain_score:23.8 name:DrsE;
95336 94914 CDS
ID metaerg.pl|05878
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Aureimonas;s__Aureimonas sp001442755;
genomedb_acc GCF_001442755.1;
genomedb_target db:genomedb|GCF_001442755.1|WP_061978597.1 9 133 evalue:3.9e-33 qcov:89.30 identity:64.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
tm_num 4;
95336 94914 transmembrane_helix
ID metaerg.pl|05879
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i94926-94994o95037-95105i95178-95246o95274-95327i;
95773 95333 CDS
ID metaerg.pl|05880
allgo_ids GO:0016021; GO:0005886;
allko_ids K07112;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Polaromonas;s__Polaromonas glacialis;
genomedb_acc GCF_000709345.1;
genomedb_target db:genomedb|GCF_000709345.1|WP_029528430.1 2 144 evalue:1.2e-32 qcov:97.90 identity:55.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF04143;
pfam_desc Sulphur transport;
pfam_id Sulf_transp;
pfam_target db:Pfam-A.hmm|PF04143.14 evalue:2.9e-08 score:32.9 best_domain_score:32.1 name:Sulf_transp;
sprot_desc hypothetical protein;
sprot_id sp|Q87AD4|Y1892_XYLFT;
sprot_target db:uniprot_sprot|sp|Q87AD4|Y1892_XYLFT 10 134 evalue:6.8e-19 qcov:85.60 identity:44.80;
tm_num 4;
95773 95333 transmembrane_helix
ID metaerg.pl|05881
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology o95360-95425i95486-95545o95573-95641i95678-95746o;
96675 95770 CDS
ID metaerg.pl|05882
allec_ids 3.-.-.-;
allgo_ids GO:0005737; GO:0005739; GO:0016788; GO:0004416; GO:0046872; GO:0050313; GO:0006749; GO:0070813; GO:0019243;
allko_ids K01011; K01180; K01069;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Marinobacter;s__Marinobacter pelagius;
genomedb_acc GCF_900114925.1;
genomedb_target db:genomedb|GCF_900114925.1|WP_092002281.1 3 286 evalue:1.0e-91 qcov:94.40 identity:59.30;
kegg_pathway_id 00620; 00272;
kegg_pathway_name Pyruvate metabolism; Cysteine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:3.2e-22 score:78.8 best_domain_score:78.4 name:Lactamase_B;
sprot_desc Glyoxylase B2;
sprot_id sp|Q54EJ5|GLOB2_DICDI;
sprot_target db:uniprot_sprot|sp|Q54EJ5|GLOB2_DICDI 2 284 evalue:3.6e-67 qcov:94.00 identity:43.50;
96772 97530 CDS
ID metaerg.pl|05883
allgo_ids GO:0016021; GO:0005886;
allko_ids K07090;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__SG8-30;s__SG8-30 sp001303245;
genomedb_acc GCA_001303245.1;
genomedb_target db:genomedb|GCA_001303245.1|KPJ82116.1 1 245 evalue:2.8e-66 qcov:97.20 identity:59.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF01925;
pfam_desc Sulfite exporter TauE/SafE;
pfam_id TauE;
pfam_target db:Pfam-A.hmm|PF01925.19 evalue:1.2e-46 score:158.5 best_domain_score:158.3 name:TauE;
sprot_desc Probable membrane transporter protein XF_0764;
sprot_id sp|Q9PFB4|Y764_XYLFA;
sprot_target db:uniprot_sprot|sp|Q9PFB4|Y764_XYLFA 8 245 evalue:1.3e-17 qcov:94.40 identity:32.30;
tm_num 7;
96772 97530 transmembrane_helix
ID metaerg.pl|05884
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology i96790-96858o96886-96948i96973-97041o97165-97233i97237-97305o97363-97431i97465-97524o;
97530 97994 CDS
ID metaerg.pl|05885
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter daejeonensis;
genomedb_acc GCF_000768355.1;
genomedb_target db:genomedb|GCF_000768355.1|WP_084087234.1 2 149 evalue:1.3e-21 qcov:96.10 identity:41.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
99207 98077 CDS
ID metaerg.pl|05886
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter concretionis;
genomedb_acc GCF_000768345.1;
genomedb_target db:genomedb|GCF_000768345.1|WP_036195721.1 1 376 evalue:6.9e-101 qcov:100.00 identity:50.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
sp YES;
98077 98127 signal_peptide
ID metaerg.pl|05887
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
99254 99535 CDS
ID metaerg.pl|05888
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38535.1 1 90 evalue:2.4e-15 qcov:96.80 identity:53.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
tm_num 3;
99254 99535 transmembrane_helix
ID metaerg.pl|05889
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
topology o99266-99325i99344-99412o99455-99514i;
99881 99543 CDS
ID metaerg.pl|05890
allgo_ids GO:0003700; GO:0006355; GO:0044212; GO:0009405;
allko_ids K22042;
casgene_acc COG0640_csa3_CAS-I-A;
casgene_name csa3;
casgene_target db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:5.6e-20 score:71.1 best_domain_score:70.9 name:csa3;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726996.1 15 112 evalue:1.6e-37 qcov:87.50 identity:83.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF12840; PF01022; PF12802; PF02082;
pfam_desc Helix-turn-helix domain; Bacterial regulatory protein, arsR family; MarR family; Transcriptional regulator;
pfam_id HTH_20; HTH_5; MarR_2; Rrf2;
pfam_target db:Pfam-A.hmm|PF12840.7 evalue:6.5e-15 score:54.2 best_domain_score:53.5 name:HTH_20; db:Pfam-A.hmm|PF01022.20 evalue:2.4e-14 score:52.1 best_domain_score:51.8 name:HTH_5; db:Pfam-A.hmm|PF12802.7 evalue:2.8e-07 score:29.6 best_domain_score:28.9 name:MarR_2; db:Pfam-A.hmm|PF02082.20 evalue:6.6e-05 score:22.4 best_domain_score:21.8 name:Rrf2;
sprot_desc Transcriptional activator HlyU;
sprot_id sp|P52695|HLYU_VIBCH;
sprot_target db:uniprot_sprot|sp|P52695|HLYU_VIBCH 16 110 evalue:8.0e-20 qcov:84.80 identity:52.60;
100013 102025 CDS
ID metaerg.pl|05891
allec_ids 5.4.99.13; 3.6.5.-;
allgo_ids GO:0031419; GO:0046872; GO:0005525; GO:0003924; GO:0047727; GO:0000287; GO:0034784; GO:0042803; GO:0006637;
allko_ids K14447; K01847; K01844; K11942; K01848; K01849;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725238.1 1 671 evalue:2.2e-291 qcov:100.00 identity:77.10;
kegg_pathway_id 00280; 00310; 00640;
kegg_pathway_name Valine, leucine and isoleucine degradation; Lysine degradation; Propanoate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 62.2575; 0.17003; 62.0624; 0.000314107; 0.0248243;
pfam_acc PF02310; PF02492; PF03308; PF01642;
pfam_desc B12 binding domain; CobW/HypB/UreG, nucleotide-binding domain; Methylmalonyl Co-A mutase-associated GTPase MeaB; Methylmalonyl-CoA mutase;
pfam_id B12-binding; cobW; MeaB; MM_CoA_mutase;
pfam_target db:Pfam-A.hmm|PF02310.19 evalue:6.4e-15 score:54.5 best_domain_score:52.4 name:B12-binding; db:Pfam-A.hmm|PF02492.19 evalue:3.9e-07 score:29.0 best_domain_score:27.7 name:cobW; db:Pfam-A.hmm|PF03308.16 evalue:1.1e-39 score:135.3 best_domain_score:134.5 name:MeaB; db:Pfam-A.hmm|PF01642.22 evalue:2.8e-09 score:35.3 best_domain_score:34.0 name:MM_CoA_mutase;
sprot_desc Fused isobutyryl-CoA mutase;
sprot_id sp|Q5KUG0|ICMF_GEOKA;
sprot_target db:uniprot_sprot|sp|Q5KUG0|ICMF_GEOKA 20 671 evalue:2.6e-158 qcov:97.20 identity:46.70;
>Feature NODE_36_length_101415_cov_28.1246
1480 14 CDS
ID metaerg.pl|05892
allec_ids 3.5.2.12;
allgo_ids GO:0019874; GO:0004040; GO:0019876;
allko_ids K01426; K01471;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478201.1 1 488 evalue:1.2e-217 qcov:100.00 identity:76.60;
kegg_pathway_id 00460; 00360; 00380; 00643; 00632; 00220;
kegg_pathway_name Cyanoamino acid metabolism; Phenylalanine metabolism; Tryptophan metabolism; Styrene degradation; Benzoate degradation via CoA ligation; Urea cycle and metabolism of amino groups;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF01425;
pfam_desc Amidase;
pfam_id Amidase;
pfam_target db:Pfam-A.hmm|PF01425.21 evalue:1.1e-75 score:254.6 best_domain_score:251.7 name:Amidase;
sprot_desc 6-aminohexanoate-cyclic-dimer hydrolase;
sprot_id sp|P13398|NYLA_FLASK;
sprot_target db:uniprot_sprot|sp|P13398|NYLA_FLASK 4 482 evalue:5.2e-47 qcov:98.20 identity:31.10;
1834 2685 CDS
ID metaerg.pl|05893
allgo_ids GO:0005886;
allko_ids K07704; K02029; K02030; K02424;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478202.1 1 283 evalue:2.8e-139 qcov:100.00 identity:86.90;
kegg_pathway_id 02040; 02020; 02010;
kegg_pathway_name Flagellar assembly; Two-component system - General; ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00497;
pfam_desc Bacterial extracellular solute-binding proteins, family 3;
pfam_id SBP_bac_3;
pfam_target db:Pfam-A.hmm|PF00497.20 evalue:4.9e-41 score:139.8 best_domain_score:139.6 name:SBP_bac_3;
sp YES;
sprot_desc Probable ABC transporter extracellular-binding protein YckB;
sprot_id sp|P42400|YCKB_BACSU;
sprot_target db:uniprot_sprot|sp|P42400|YCKB_BACSU 1 281 evalue:1.8e-63 qcov:99.30 identity:44.60;
1834 1893 lipoprotein_signal_peptide
ID metaerg.pl|05894
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
2688 3371 CDS
ID metaerg.pl|05895
allgo_ids GO:0016020; GO:0055085; GO:0043190; GO:0005886; GO:0022857; GO:0006865;
allko_ids K02029; K02030; K10009;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091267648.1 1 226 evalue:1.2e-108 qcov:99.60 identity:90.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.1e-21 score:76.7 best_domain_score:76.1 name:BPD_transp_1;
sprot_desc Probable amino-acid ABC transporter permease protein YckA;
sprot_id sp|P42399|YCKA_BACSU;
sprot_target db:uniprot_sprot|sp|P42399|YCKA_BACSU 1 225 evalue:2.6e-70 qcov:99.10 identity:57.80;
tigrfam_acc TIGR01726;
tigrfam_desc amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name HEQRo_perm_3TM;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01726 evalue:2.6e-32 score:110.5 best_domain_score:110.5 name:TIGR01726;
tm_num 4;
2688 3371 transmembrane_helix
ID metaerg.pl|05896
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology o2778-2846i2883-2951o2961-3029i3261-3329o;
4397 3432 CDS
ID metaerg.pl|05897
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0003824; GO:0050662;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478204.1 1 320 evalue:8.3e-164 qcov:99.70 identity:89.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF01073; PF01370; PF16363; PF02719; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:2.8e-06 score:25.8 best_domain_score:25.2 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:6.9e-26 score:90.4 best_domain_score:90.0 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:1.7e-21 score:76.2 best_domain_score:75.7 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF02719.15 evalue:5.9e-09 score:34.7 best_domain_score:31.3 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:5.1e-12 score:44.7 best_domain_score:44.0 name:RmlD_sub_bind;
sprot_desc Uncharacterized epimerase/dehydratase SSP2164;
sprot_id sp|Q49VA1|Y2164_STAS1;
sprot_target db:uniprot_sprot|sp|Q49VA1|Y2164_STAS1 1 314 evalue:6.1e-121 qcov:97.80 identity:67.50;
5677 4484 CDS
ID metaerg.pl|05898
allec_ids 2.3.1.-;
allgo_ids GO:0009058; GO:0030170; GO:0016740;
allko_ids K00639;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium subtropicum;
genomedb_acc GCF_900112455.1;
genomedb_target db:genomedb|GCF_900112455.1|WP_091529612.1 1 397 evalue:3.3e-210 qcov:100.00 identity:93.20;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-6412; KDO-LIPASYN-PWY; PWY-5393; PWY-5972; PWY-5405; PWY-6318; PWY-5307; PWY-5400; PWY-5965; PWY-5209; PWY-5987; PWY-6411; PWY-5268; PWY0-881; PWY-5140; PWY-5313; PWY-6404; PWY-6316; CENTBENZCOA-PWY; PWY-5284; PWY-6515; P3-PWY; PWY-6295; ECASYN-PWY; PWY-84; PWY-6438; THREOCAT-PWY; PWY-5139; PWY-6310; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5080; PWY-6397; PWY1-3; PWY-6442; PWY-6312; PWY-6418; BENZCOA-PWY; PWY-5184; PWY-4801; KDO-NAGLIPASYN-PWY; LPSSYN-PWY; PWY1A0-6325; PWY-6432; FASYN-INITIAL-PWY; PWYG-321; PWY-6413; PWY-6113; PWY-5981; PWY-5437; PWY-5477;
metacyc_pathway_name ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; raspberry ketone biosynthesis;; stearate biosynthesis I (animals and fungi);; superpathway of betalain biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; gentiodelphin biosynthesis;; amaranthin biosynthesis;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; sorgoleone biosynthesis;; ginsenoside degradation I;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; cannabinoid biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; aromatic polyketides biosynthesis;; benzoyl-CoA degradation II (anaerobic);; shisonin biosynthesis;; phloridzin biosynthesis;; gallate degradation III (anaerobic);; ; enterobacterial common antigen biosynthesis;; resveratrol biosynthesis;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; pelargonidin conjugates biosynthesis;; aloesone biosynthesis II;; sophorolipid biosynthesis;; very long chain fatty acid biosynthesis I;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; barbaloin biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; aloesone biosynthesis I;; superpathway of (Kdo)2-lipid A biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; actinorhodin biosynthesis;; curcuminoid biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; ginsenoside degradation III;; superpathway of mycolate biosynthesis;; CDP-diacylglycerol biosynthesis III;; L-threonine degradation I;; gallotannin biosynthesis;;
metacyc_pathway_type Ginsenoside-Degradation;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; Stearate-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; BETALAIN-ALKALOIDS;; Fatty-acid-biosynthesis;; METHANOGENESIS;; QUINONE-SYN;; Ginsenoside-Degradation;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Benzoyl-CoA-Degradation;; ANTHOCYANIN-SYN;; FLAVONOID-SYN;; GALLATE-DEG;; ; Lipopolysaccharide-Biosynthesis; Super-Pathways;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis;; Cell-Wall-Biosynthesis;; Storage-Compounds-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; POLYKETIDE-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; POLYKETIDE-SYN;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; TERPENOID-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; THREONINE-DEG;; GALLOTANNINS;;
pfam_acc PF00155; PF01053;
pfam_desc Aminotransferase class I and II; Cys/Met metabolism PLP-dependent enzyme;
pfam_id Aminotran_1_2; Cys_Met_Meta_PP;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:8.2e-68 score:228.4 best_domain_score:228.2 name:Aminotran_1_2; db:Pfam-A.hmm|PF01053.20 evalue:3.6e-06 score:25.0 best_domain_score:24.5 name:Cys_Met_Meta_PP;
sprot_desc Putative pyridoxal phosphate-dependent acyltransferase;
sprot_id sp|P60121|PPAT_STAAM;
sprot_target db:uniprot_sprot|sp|P60121|PPAT_STAAM 4 396 evalue:1.8e-170 qcov:99.00 identity:74.30;
tigrfam_acc TIGR01825;
tigrfam_desc putative pyridoxal phosphate-dependent acyltransferase;
tigrfam_name gly_Cac_T_rel;
tigrfam_target db:TIGRFAMs.hmm|TIGR01825 evalue:5.2e-192 score:636.8 best_domain_score:636.6 name:TIGR01825;
5867 7168 CDS
ID metaerg.pl|05899
allec_ids 2.4.2.2;
allgo_ids GO:0016757; GO:0005829; GO:0046872; GO:0004645; GO:0016154; GO:0009032; GO:0006206; GO:0006213;
allko_ids K13497; K00766; K00758; K00756;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478206.1 1 433 evalue:3.6e-202 qcov:100.00 identity:85.70;
kegg_pathway_id 00983; 02020; 00240; 00230; 00400;
kegg_pathway_name Drug metabolism - other enzymes; Two-component system - General; Pyrimidine metabolism; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00591; PF02885; PF07831;
pfam_desc Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; Pyrimidine nucleoside phosphorylase C-terminal domain;
pfam_id Glycos_transf_3; Glycos_trans_3N; PYNP_C;
pfam_target db:Pfam-A.hmm|PF00591.21 evalue:2e-49 score:167.7 best_domain_score:166.9 name:Glycos_transf_3; db:Pfam-A.hmm|PF02885.17 evalue:7e-21 score:73.1 best_domain_score:70.6 name:Glycos_trans_3N; db:Pfam-A.hmm|PF07831.13 evalue:3.2e-26 score:90.0 best_domain_score:88.7 name:PYNP_C;
sprot_desc Pyrimidine-nucleoside phosphorylase;
sprot_id sp|P39142|PDP_BACSU;
sprot_target db:uniprot_sprot|sp|P39142|PDP_BACSU 1 432 evalue:1.3e-163 qcov:99.80 identity:70.40;
tigrfam_acc TIGR02644;
tigrfam_desc pyrimidine-nucleoside phosphorylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name Y_phosphoryl;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02644 evalue:1.6e-178 score:592.9 best_domain_score:592.7 name:TIGR02644;
7320 8045 CDS
ID metaerg.pl|05900
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191402.1 12 239 evalue:4.1e-83 qcov:94.60 identity:73.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF03591;
pfam_desc AzlC protein;
pfam_id AzlC;
pfam_target db:Pfam-A.hmm|PF03591.14 evalue:8.6e-35 score:119.4 best_domain_score:119.4 name:AzlC;
tm_num 4;
7320 8045 transmembrane_helix
ID metaerg.pl|05901
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i7401-7469o7512-7580i7839-7907o7935-8003i;
8035 8358 CDS
ID metaerg.pl|05902
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191405.1 1 107 evalue:2.1e-39 qcov:100.00 identity:80.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF05437;
pfam_desc Branched-chain amino acid transport protein (AzlD);
pfam_id AzlD;
pfam_target db:Pfam-A.hmm|PF05437.12 evalue:1.7e-23 score:81.9 best_domain_score:81.7 name:AzlD;
tm_num 3;
8035 8358 transmembrane_helix
ID metaerg.pl|05903
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology o8047-8115i8152-8211o8299-8352i;
8922 8425 CDS
ID metaerg.pl|05904
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848382.1 4 165 evalue:2.8e-46 qcov:98.20 identity:55.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
tm_num 2;
8922 8425 transmembrane_helix
ID metaerg.pl|05905
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i8473-8541o8731-8799i;
10014 8962 CDS
ID metaerg.pl|05906
allec_ids 5.3.3.2;
allgo_ids GO:0016491; GO:0005737; GO:0010181; GO:0004452; GO:0000287; GO:0070402; GO:0008299;
allko_ids K01823;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478210.1 1 350 evalue:5.9e-163 qcov:100.00 identity:81.40;
kegg_pathway_id 00100; 00900;
kegg_pathway_name Biosynthesis of steroids; Terpenoid biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-5121; POLYISOPRENSYN-PWY; PWY-5910; PWY-5123; PWY-6383; PWY-922; NONMEVIPP-PWY; PWY-6270; PWY-6146; PWY-6404; PWY-6174;
metacyc_pathway_name superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; polyisoprenoid biosynthesis (E. coli);; superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; trans, trans-farnesyl diphosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; mevalonate pathway I;; methylerythritol phosphate pathway I;; isoprene biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; mevalonate pathway II (archaea);;
metacyc_pathway_type DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; All-Trans-Farnesyl-PP-Biosynthesis;; Polyprenyl-Biosynthesis;; Mevalonate-Pathways;; MEP-Pathways;; ISOPRENOIDS; Super-Pathways;; Biosynthesis; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; Mevalonate-Pathways;;
pfam_acc PF01070; PF01645; PF00478;
pfam_desc FMN-dependent dehydrogenase; Conserved region in glutamate synthase; IMP dehydrogenase / GMP reductase domain;
pfam_id FMN_dh; Glu_synthase; IMPDH;
pfam_target db:Pfam-A.hmm|PF01070.18 evalue:1.4e-21 score:76.2 best_domain_score:61.7 name:FMN_dh; db:Pfam-A.hmm|PF01645.17 evalue:6.5e-05 score:21.5 best_domain_score:20.1 name:Glu_synthase; db:Pfam-A.hmm|PF00478.25 evalue:6.2e-09 score:34.5 best_domain_score:22.3 name:IMPDH;
sprot_desc Isopentenyl-diphosphate delta-isomerase;
sprot_id sp|Q837E2|IDI2_ENTFA;
sprot_target db:uniprot_sprot|sp|Q837E2|IDI2_ENTFA 6 349 evalue:5.3e-94 qcov:98.30 identity:48.60;
tigrfam_acc TIGR02151;
tigrfam_desc isopentenyl-diphosphate delta-isomerase, type 2;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name IPP_isom_2;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02151 evalue:6e-119 score:396.1 best_domain_score:395.9 name:TIGR02151;
11136 10039 CDS
ID metaerg.pl|05907
allec_ids 2.7.4.2;
allgo_ids GO:0005524; GO:0004631; GO:0019287;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034300575.1 10 363 evalue:6.7e-93 qcov:97.00 identity:54.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-5910; PWY-6146; PWY-922;
metacyc_pathway_name superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; mevalonate pathway I;;
metacyc_pathway_type DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; Biosynthesis; Super-Pathways;; Mevalonate-Pathways;;
pfam_acc PF08544; PF00288;
pfam_desc GHMP kinases C terminal ; GHMP kinases N terminal domain;
pfam_id GHMP_kinases_C; GHMP_kinases_N;
pfam_target db:Pfam-A.hmm|PF08544.13 evalue:2.4e-06 score:27.0 best_domain_score:25.7 name:GHMP_kinases_C; db:Pfam-A.hmm|PF00288.26 evalue:6.4e-10 score:38.4 best_domain_score:38.2 name:GHMP_kinases_N;
sprot_desc Phosphomevalonate kinase;
sprot_id sp|Q9KWG3|PMK_STRC1;
sprot_target db:uniprot_sprot|sp|Q9KWG3|PMK_STRC1 8 361 evalue:6.8e-52 qcov:97.00 identity:36.20;
tigrfam_acc TIGR01220;
tigrfam_desc phosphomevalonate kinase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name Pmev_kin_Gr_pos;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01220 evalue:3.2e-111 score:371.0 best_domain_score:370.8 name:TIGR01220;
12104 11136 CDS
ID metaerg.pl|05908
allec_ids 4.1.1.33;
allgo_ids GO:0005524; GO:0005829; GO:0004163; GO:0019287;
allko_ids K01597;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478212.1 1 322 evalue:8.1e-143 qcov:100.00 identity:79.80;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-6146; PWY-5910; PWY-922;
metacyc_pathway_name Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; mevalonate pathway I;;
metacyc_pathway_type Biosynthesis; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; Mevalonate-Pathways;;
pfam_acc PF00288; PF18376;
pfam_desc GHMP kinases N terminal domain; Mevalonate 5-diphosphate decarboxylase C-terminal domain;
pfam_id GHMP_kinases_N; MDD_C;
pfam_target db:Pfam-A.hmm|PF00288.26 evalue:3.9e-06 score:26.2 best_domain_score:25.2 name:GHMP_kinases_N; db:Pfam-A.hmm|PF18376.1 evalue:3.1e-24 score:85.0 best_domain_score:84.4 name:MDD_C;
sprot_desc Diphosphomevalonate decarboxylase;
sprot_id sp|Q97UL5|DMD_SACS2;
sprot_target db:uniprot_sprot|sp|Q97UL5|DMD_SACS2 7 317 evalue:3.8e-38 qcov:96.60 identity:33.80;
tigrfam_acc TIGR01240;
tigrfam_desc diphosphomevalonate decarboxylase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name mevDPdecarb;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01240 evalue:3.1e-118 score:393.4 best_domain_score:393.2 name:TIGR01240;
13050 12097 CDS
ID metaerg.pl|05909
allec_ids 2.7.1.36;
allgo_ids GO:0005524; GO:0005737; GO:0000287; GO:0004496; GO:0019287;
allko_ids K00849; K00872; K00869;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478213.1 1 317 evalue:1.0e-113 qcov:100.00 identity:66.90;
kegg_pathway_id 00100; 00052; 00260;
kegg_pathway_name Biosynthesis of steroids; Galactose metabolism; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-6146; PWY-5910; PWY-6174; PWY-922;
metacyc_pathway_name Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; mevalonate pathway II (archaea);; mevalonate pathway I;;
metacyc_pathway_type Biosynthesis; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; Mevalonate-Pathways;; Mevalonate-Pathways;;
pfam_acc PF08544; PF00288;
pfam_desc GHMP kinases C terminal ; GHMP kinases N terminal domain;
pfam_id GHMP_kinases_C; GHMP_kinases_N;
pfam_target db:Pfam-A.hmm|PF08544.13 evalue:5.7e-14 score:51.5 best_domain_score:50.0 name:GHMP_kinases_C; db:Pfam-A.hmm|PF00288.26 evalue:5.5e-13 score:48.2 best_domain_score:46.8 name:GHMP_kinases_N;
sprot_desc Mevalonate kinase;
sprot_id sp|C5A7L8|MVK_THEGJ;
sprot_target db:uniprot_sprot|sp|C5A7L8|MVK_THEGJ 7 289 evalue:2.8e-33 qcov:89.30 identity:33.90;
tigrfam_acc TIGR00549;
tigrfam_desc mevalonate kinase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name mevalon_kin;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00549 evalue:1.1e-81 score:273.5 best_domain_score:273.2 name:TIGR00549;
13262 14185 CDS
ID metaerg.pl|05910
allec_ids 2.7.1.33;
allgo_ids GO:0005524; GO:0016301; GO:0005737; GO:0004594; GO:0015937;
allko_ids K00867;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478214.1 1 307 evalue:4.2e-157 qcov:100.00 identity:88.60;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-4221; COA-PWY; PWY-4242; PANTOSYN-PWY;
metacyc_pathway_name superpathway of coenzyme A biosynthesis II (plants);; coenzyme A biosynthesis I (prokaryotic);; ; superpathway of coenzyme A biosynthesis I (bacteria);;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis;; ; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;;
pfam_acc PF00485;
pfam_desc Phosphoribulokinase / Uridine kinase family;
pfam_id PRK;
pfam_target db:Pfam-A.hmm|PF00485.18 evalue:4.1e-14 score:52.0 best_domain_score:47.2 name:PRK;
sprot_desc Pantothenate kinase;
sprot_id sp|Q839J7|COAA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q839J7|COAA_ENTFA 1 307 evalue:2.2e-104 qcov:100.00 identity:57.00;
tigrfam_acc TIGR00554;
tigrfam_desc pantothenate kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name panK_bact;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00554 evalue:3e-115 score:384.0 best_domain_score:383.8 name:TIGR00554;
14207 14503 CDS
ID metaerg.pl|05911
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191423.1 1 97 evalue:9.1e-21 qcov:99.00 identity:60.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF11518;
pfam_desc Protein of unknown function (DUF3221);
pfam_id DUF3221;
pfam_target db:Pfam-A.hmm|PF11518.8 evalue:8.9e-07 score:28.4 best_domain_score:26.8 name:DUF3221;
sp YES;
14207 14257 lipoprotein_signal_peptide
ID metaerg.pl|05912
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
14641 15627 CDS
ID metaerg.pl|05913
allgo_ids GO:0005515;
allko_ids K02482;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_051503714.1 1 328 evalue:3.6e-138 qcov:100.00 identity:74.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00990; PF08447;
pfam_desc Diguanylate cyclase, GGDEF domain; PAS fold;
pfam_id GGDEF; PAS_3;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:7.7e-25 score:86.7 best_domain_score:85.9 name:GGDEF; db:Pfam-A.hmm|PF08447.12 evalue:1.8e-16 score:59.5 best_domain_score:57.9 name:PAS_3;
tigrfam_acc TIGR00229; TIGR00254;
tigrfam_desc PAS domain S-box protein; diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Regulatory functions; Signal transduction;
tigrfam_name sensory_box; GGDEF;
tigrfam_sub1role Small molecule interactions; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:2.2e-06 score:27.0 best_domain_score:25.3 name:TIGR00229; db:TIGRFAMs.hmm|TIGR00254 evalue:6.3e-24 score:83.7 best_domain_score:83.0 name:TIGR00254;
15690 16427 CDS
ID metaerg.pl|05914
allec_ids 2.4.1.187; 2.4.1.-;
allgo_ids GO:0009058; GO:0047244; GO:0071555; GO:0019350;
allko_ids K02852; K05946;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265219.1 1 243 evalue:8.4e-108 qcov:99.20 identity:75.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-5399; PWY-5342; PWY-5405; PWY-5307; PWY-2881; PWY-5343; PWY-5338; PWY-6297; PWY-5400; PWY-5313; PWY-5793; PWY-5380; PWY-5397; PWY-6404; PWY-2901; PWY-5268; PWY-881; PWY-5379; PWY-83; PWY-5784; TEICHOICACID-PWY; PWY-5284; PWY-5272; ECASYN-PWY; PWY-5756; PWY-5160; PWY-5139; PWY-5800; PWY-5161; PWY-4421; PWY-6397; PWY-5666; PWY-5672; PWY-5797; PWY-2021; PWY-5926; PWY-5398; PWY-5339; PWY-5774; PWY-5759; PWY-5286;
metacyc_pathway_name betacyanin biosynthesis;; ajugose biosynthesis I (galactinol-dependent);; superpathway of betalain biosynthesis;; gentiodelphin biosynthesis;; cytokinins 7-N-glucoside biosynthesis;; ajugose biosynthesis II (galactinol-independent);; galactosylcyclitol biosynthesis;; tuberonate glucoside biosynthesis;; amaranthin biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; maysin biosynthesis;; A series fagopyritols biosynthesis;; crocetin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; cytokinins 9-N-glucoside biosynthesis;; salvianin biosynthesis;; trehalose biosynthesis II;; B series fagopyritols biosynthesis;; monolignol glucosides biosynthesis;; indole-3-acetate inactivation VIII;; poly(glycerol phosphate) wall teichoic acid biosynthesis;; shisonin biosynthesis;; abscisic acid degradation by glucosylation;; enterobacterial common antigen biosynthesis;; saponin biosynthesis II;; rose anthocyanin biosynthesis I (via cyanidin 5-O-β-D-glucoside);; pelargonidin conjugates biosynthesis;; xylan biosynthesis;; 6'-deoxychalcone metabolism;; curcumin glucoside biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; α-solanine/α-chaconine biosynthesis;; ginsenosides biosynthesis;; indole-3-acetate inactivation VI;; indole-3-acetate inactivation IV;; afrormosin conjugates interconversion;; crocetin esters biosynthesis;; chalcone 2'-O-glucoside biosynthesis;; saponin biosynthesis IV;; saponin biosynthesis III;; anthocyanidin sophoroside metabolism;;
metacyc_pathway_type BETALAIN-ALKALOIDS;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; ANTHOCYANIN-SYN;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; Cyclitols-Biosynthesis;; Inactivation;; BETALAIN-ALKALOIDS;; ANTHOCYANIN-SYN; Super-Pathways;; FLAVONE-SYN;; CYCLITOLS-DEG; SUGAR-DERIVS;; APOCAROTENOID-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; ANTHOCYANIN-SYN;; Trehalose-biosynthesis;; CYCLITOLS-DEG; SUGAR-DERIVS;; LIGNIN-SYN; Metabolic-Clusters;; Indole-3-Acetate-Inactivation;; Teichoic-Acids-Biosynthesis;; ANTHOCYANIN-SYN;; Abscisic-Acid-Degradation; Interconversion;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN;; ANTHOCYANIN-SYN;; SECONDARY-CELL-WALL;; CHALCONE-SYN;; PHENYLPROPANOID-SYN; POLYKETIDE-SYN;; Cell-Wall-Biosynthesis;; ALKALOIDS-SYN;; TRITERPENOID-SYN;; Indole-3-Acetate-Inactivation;; Indole-3-Acetate-Inactivation;; ISOFLAVONOID-SYN; Interconversion;; APOCAROTENOID-SYN;; CHALCONE-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN; Metabolic-Clusters;;
pfam_acc PF03808;
pfam_desc Glycosyl transferase WecB/TagA/CpsF family;
pfam_id Glyco_tran_WecB;
pfam_target db:Pfam-A.hmm|PF03808.13 evalue:3.5e-57 score:192.3 best_domain_score:191.3 name:Glyco_tran_WecB;
sprot_desc N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase;
sprot_id sp|Q8RKI7|TARA_BACPZ;
sprot_target db:uniprot_sprot|sp|Q8RKI7|TARA_BACPZ 28 240 evalue:1.4e-48 qcov:86.90 identity:41.80;
tigrfam_acc TIGR00696;
tigrfam_desc glycosyltransferase, WecB/TagA/CpsF family;
tigrfam_mainrole Cell envelope;
tigrfam_name wecG_tagA_cpsF;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00696 evalue:3.8e-53 score:179.0 best_domain_score:177.8 name:TIGR00696;
16424 17509 CDS
ID metaerg.pl|05915
allec_ids 2.4.1.-;
allgo_ids GO:0016757; GO:0006486; GO:0045232;
allko_ids K13003; K00712; K12989; K00749; K13677; K08256; K02844; K03844; K13657; K02840; K00703; K12996; K13668; K03429;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191431.1 1 358 evalue:6.0e-102 qcov:99.20 identity:53.60;
kegg_pathway_id 00561; 01031; 00500; 01030; 00510; 00540;
kegg_pathway_name Glycerolipid metabolism; Glycan structures - biosynthesis 2; Starch and sucrose metabolism; Glycan structures - biosynthesis 1; N-Glycan biosynthesis; Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-5160; PWY-5756; PWY-5139; PWY-5161; PWY-5800; PWY-5666; PWY-6397; PWY-4421; PWY-5672; PWY-2021; PWY-5797; PWY-5774; PWY-5926; PWY-5339; PWY-5398; PWY-5286; PWY-5759; PWY-5307; PWY-5342; PWY-5405; PWY-5399; PWY-5343; PWY-2881; PWY-6297; PWY-5338; PWY-5400; PWY-2901; PWY-5397; PWY-5380; PWY-6404; PWY-5793; PWY-5313; PWY-881; PWY-5268; PWY-5784; PWY-83; PWY-5379; ECASYN-PWY; PWY-5272; PWY-5284;
metacyc_pathway_name rose anthocyanin biosynthesis I (via cyanidin 5-O-β-D-glucoside);; saponin biosynthesis II;; pelargonidin conjugates biosynthesis;; 6'-deoxychalcone metabolism;; xylan biosynthesis;; α-solanine/α-chaconine biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; curcumin glucoside biosynthesis;; ginsenosides biosynthesis;; indole-3-acetate inactivation IV;; indole-3-acetate inactivation VI;; saponin biosynthesis IV;; afrormosin conjugates interconversion;; chalcone 2'-O-glucoside biosynthesis;; crocetin esters biosynthesis;; anthocyanidin sophoroside metabolism;; saponin biosynthesis III;; gentiodelphin biosynthesis;; ajugose biosynthesis I (galactinol-dependent);; superpathway of betalain biosynthesis;; betacyanin biosynthesis;; ajugose biosynthesis II (galactinol-independent);; cytokinins 7-N-glucoside biosynthesis;; tuberonate glucoside biosynthesis;; galactosylcyclitol biosynthesis;; amaranthin biosynthesis;; cytokinins 9-N-glucoside biosynthesis;; crocetin biosynthesis;; A series fagopyritols biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; maysin biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; trehalose biosynthesis II;; salvianin biosynthesis;; indole-3-acetate inactivation VIII;; monolignol glucosides biosynthesis;; B series fagopyritols biosynthesis;; enterobacterial common antigen biosynthesis;; abscisic acid degradation by glucosylation;; shisonin biosynthesis;;
metacyc_pathway_type ANTHOCYANIN-SYN;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN;; CHALCONE-SYN;; SECONDARY-CELL-WALL;; ALKALOIDS-SYN;; Cell-Wall-Biosynthesis;; PHENYLPROPANOID-SYN; POLYKETIDE-SYN;; TRITERPENOID-SYN;; Indole-3-Acetate-Inactivation;; Indole-3-Acetate-Inactivation;; TRITERPENOID-SYN;; ISOFLAVONOID-SYN; Interconversion;; CHALCONE-SYN;; APOCAROTENOID-SYN;; ANTHOCYANIN-SYN; Metabolic-Clusters;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; BETALAIN-ALKALOIDS;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Inactivation;; Cyclitols-Biosynthesis;; BETALAIN-ALKALOIDS;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; APOCAROTENOID-SYN;; CYCLITOLS-DEG; SUGAR-DERIVS;; Cell-Wall-Biosynthesis; Super-Pathways;; FLAVONE-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; Trehalose-biosynthesis;; ANTHOCYANIN-SYN;; Indole-3-Acetate-Inactivation;; LIGNIN-SYN; Metabolic-Clusters;; CYCLITOLS-DEG; SUGAR-DERIVS;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Abscisic-Acid-Degradation; Interconversion;; ANTHOCYANIN-SYN;;
pfam_acc PF00534; PF13439; PF13692; PF13477; PF13579;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1; Glycosyl transferase 4-like; Glycosyl transferase 4-like domain;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_4; Glyco_trans_4_2; Glyco_trans_4_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:5.1e-35 score:119.8 best_domain_score:119.1 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:9.5e-18 score:64.0 best_domain_score:62.4 name:Glyco_transf_4; db:Pfam-A.hmm|PF13692.6 evalue:3.4e-26 score:91.5 best_domain_score:90.7 name:Glyco_trans_1_4; db:Pfam-A.hmm|PF13477.6 evalue:9.2e-07 score:28.2 best_domain_score:27.2 name:Glyco_trans_4_2; db:Pfam-A.hmm|PF13579.6 evalue:2.8e-13 score:49.9 best_domain_score:48.4 name:Glyco_trans_4_4;
sprot_desc Archaeal glycosylation protein 16;
sprot_id sp|Q4JAK2|AGL16_SULAC;
sprot_target db:uniprot_sprot|sp|Q4JAK2|AGL16_SULAC 99 360 evalue:8.3e-10 qcov:72.60 identity:24.60;
17899 18882 CDS
ID metaerg.pl|05916
allec_ids 7.6.2.11;
allgo_ids GO:0005524; GO:0043190; GO:0016887; GO:0015594; GO:0015595;
allko_ids K02004; K02052; K02006; K02010; K05847; K01997; K02003; K02032; K02017; K11084; K10199; K06861; K02071; K01996; K02028; K02068; K11072; K02045; K10239; K02062; K01998; K10112; K10111; K02031; K02049; K01995; K02065; K11076; K02013; K10235; K05816; K06857; K11080; K10000; K02023; K02018; K09812; K01990; K10243; K02000; K11962; K10230;
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Caldalkalibacillales;f__Caldalkalibacillaceae;g__Bacillus_AT;s__Bacillus_AT mannanilyticus;
genomedb_acc GCF_000615945.1;
genomedb_target db:genomedb|GCF_000615945.1|WP_051541239.1 18 324 evalue:2.3e-100 qcov:93.90 identity:58.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF13304; PF00005; PF08402;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; TOBE domain;
pfam_id AAA_21; ABC_tran; TOBE_2;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:8.7e-09 score:34.8 best_domain_score:17.9 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.1e-34 score:119.2 best_domain_score:118.6 name:ABC_tran; db:Pfam-A.hmm|PF08402.10 evalue:2.8e-06 score:26.7 best_domain_score:22.6 name:TOBE_2;
sprot_desc Spermidine/putrescine import ATP-binding protein PotA;
sprot_id sp|Q722B1|POTA_LISMF;
sprot_target db:uniprot_sprot|sp|Q722B1|POTA_LISMF 3 321 evalue:2.2e-70 qcov:97.60 identity:42.40;
18908 19909 CDS
ID metaerg.pl|05917
allko_ids K02012;
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Caldalkalibacillales;f__Caldalkalibacillaceae;g__Bacillus_AT;s__Bacillus_AT mannanilyticus;
genomedb_acc GCF_000615945.1;
genomedb_target db:genomedb|GCF_000615945.1|WP_081791960.1 35 333 evalue:2.7e-101 qcov:89.80 identity:61.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF01547; PF13531; PF13343; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_11; SBP_bac_6; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:8.8e-10 score:38.2 best_domain_score:37.0 name:SBP_bac_1; db:Pfam-A.hmm|PF13531.6 evalue:1.2e-19 score:70.3 best_domain_score:69.7 name:SBP_bac_11; db:Pfam-A.hmm|PF13343.6 evalue:2.7e-24 score:85.2 best_domain_score:84.8 name:SBP_bac_6; db:Pfam-A.hmm|PF13416.6 evalue:6.2e-16 score:58.3 best_domain_score:57.9 name:SBP_bac_8;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P43951|Y131_HAEIN;
sprot_target db:uniprot_sprot|sp|P43951|Y131_HAEIN 3 282 evalue:7.4e-13 qcov:84.10 identity:26.00;
tm_num 1;
18908 18979 lipoprotein_signal_peptide
ID metaerg.pl|05918
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
18908 19909 transmembrane_helix
ID metaerg.pl|05919
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i18932-19000o;
19925 21607 CDS
ID metaerg.pl|05920
allgo_ids GO:0016020; GO:0055085;
allko_ids K02054; K10109; K02011; K02053;
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Caldalkalibacillales;f__Caldalkalibacillaceae;g__Bacillus_AT;s__Bacillus_AT mannanilyticus;
genomedb_acc GCF_000615945.1;
genomedb_target db:genomedb|GCF_000615945.1|WP_081791968.1 33 554 evalue:5.7e-168 qcov:93.20 identity:56.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.7e-30 score:105.4 best_domain_score:64.4 name:BPD_transp_1;
tm_num 12;
19925 21607 transmembrane_helix
ID metaerg.pl|05921
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i19985-20053o20129-20197i20234-20296o20354-20422i20507-20575o20663-20731i20819-20887o21005-21073i21110-21178o21191-21259i21353-21412o21512-21571i;
21600 22778 CDS
ID metaerg.pl|05922
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Caldalkalibacillales;f__Caldalkalibacillaceae;g__Bacillus_AT;s__Bacillus_AT mannanilyticus;
genomedb_acc GCF_000615945.1;
genomedb_target db:genomedb|GCF_000615945.1|WP_025026701.1 6 336 evalue:6.4e-33 qcov:84.40 identity:30.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:2.1e-07 score:30.4 best_domain_score:27.8 name:Lactamase_B;
23060 24544 CDS
ID metaerg.pl|05923
allec_ids 6.3.4.21;
allgo_ids GO:0005829; GO:0004516; GO:0004514; GO:0009435; GO:0034355; GO:0019358;
allko_ids K00763;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478219.1 1 494 evalue:2.0e-257 qcov:100.00 identity:88.50;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF04095; PF17956; PF17767;
pfam_desc Nicotinate phosphoribosyltransferase (NAPRTase) family; Nicotinate phosphoribosyltransferase C-terminal domain; Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain;
pfam_id NAPRTase; NAPRTase_C; NAPRTase_N;
pfam_target db:Pfam-A.hmm|PF04095.16 evalue:1.5e-09 score:37.1 best_domain_score:36.4 name:NAPRTase; db:Pfam-A.hmm|PF17956.1 evalue:3.5e-32 score:110.4 best_domain_score:109.5 name:NAPRTase_C; db:Pfam-A.hmm|PF17767.1 evalue:1.5e-41 score:141.0 best_domain_score:139.6 name:NAPRTase_N;
sprot_desc Nicotinate phosphoribosyltransferase;
sprot_id sp|O32090|PNCB_BACSU;
sprot_target db:uniprot_sprot|sp|O32090|PNCB_BACSU 5 480 evalue:2.4e-153 qcov:96.40 identity:55.70;
tigrfam_acc TIGR01513;
tigrfam_desc nicotinate phosphoribosyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name NAPRTase_put;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01513 evalue:2.5e-177 score:589.5 best_domain_score:589.3 name:TIGR01513;
24594 25421 CDS
ID metaerg.pl|05924
allec_ids 6.3.1.5;
allgo_ids GO:0005524; GO:0046872; GO:0003952; GO:0008795; GO:0009435;
allko_ids K01916;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478568.1 1 275 evalue:3.1e-119 qcov:100.00 identity:77.80;
kegg_pathway_id 00910; 00760;
kegg_pathway_name Nitrogen metabolism; Nicotinate and nicotinamide metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY0-781; PYRIDNUCSYN-PWY;
metacyc_pathway_name aspartate superpathway;; NAD de novo biosynthesis I (from aspartate);;
metacyc_pathway_type Super-Pathways;; NAD-SYN;;
pfam_acc PF02540;
pfam_desc NAD synthase;
pfam_id NAD_synthase;
pfam_target db:Pfam-A.hmm|PF02540.17 evalue:4.5e-71 score:238.0 best_domain_score:237.7 name:NAD_synthase;
sprot_desc NH(3)-dependent NAD(+) synthetase;
sprot_id sp|Q1WSR2|NADE_LACS1;
sprot_target db:uniprot_sprot|sp|Q1WSR2|NADE_LACS1 1 275 evalue:9.6e-99 qcov:100.00 identity:62.50;
tigrfam_acc TIGR00552;
tigrfam_desc NAD+ synthetase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name nadE;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00552 evalue:1.5e-73 score:246.3 best_domain_score:246.1 name:TIGR00552;
25494 26630 CDS
ID metaerg.pl|05925
allec_ids 3.5.1.25;
allgo_ids GO:0016787; GO:0005506; GO:0047419; GO:0008448; GO:0042803; GO:0005975; GO:0006046; GO:0019262;
allko_ids K01443; K02079;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191436.1 1 378 evalue:1.5e-172 qcov:100.00 identity:79.60;
kegg_pathway_id 00530; 00052;
kegg_pathway_name Aminosugars metabolism; Galactose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id P441-PWY; PWY-6517; GLUAMCAT-PWY;
metacyc_pathway_name superpathway of N-acetylneuraminate degradation;; N-acetylglucosamine degradation II;; N-acetylglucosamine degradation I;;
metacyc_pathway_type CARBOXYLATES-DEG; Super-Pathways;; N-Acetylglucosamine-Degradation; Super-Pathways;; N-Acetylglucosamine-Degradation;;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:8.8e-24 score:83.7 best_domain_score:82.9 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:5.3e-13 score:48.5 best_domain_score:24.3 name:Amidohydro_3;
sprot_desc N-acetylglucosamine-6-phosphate deacetylase;
sprot_id sp|Q84F86|NAGA_LYSSH;
sprot_target db:uniprot_sprot|sp|Q84F86|NAGA_LYSSH 40 374 evalue:2.0e-70 qcov:88.60 identity:42.10;
tigrfam_acc TIGR00221;
tigrfam_desc N-acetylglucosamine-6-phosphate deacetylase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name nagA;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR00221 evalue:2.2e-99 score:332.1 best_domain_score:332.0 name:TIGR00221;
26617 27345 CDS
ID metaerg.pl|05926
allec_ids 3.5.99.6;
allgo_ids GO:0005975; GO:0004342; GO:0006044; GO:0019262;
allko_ids K02564;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478570.1 8 239 evalue:1.9e-99 qcov:95.90 identity:78.00;
kegg_pathway_id 00530;
kegg_pathway_name Aminosugars metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id P441-PWY; PWY-6517; GLUAMCAT-PWY;
metacyc_pathway_name superpathway of N-acetylneuraminate degradation;; N-acetylglucosamine degradation II;; N-acetylglucosamine degradation I;;
metacyc_pathway_type CARBOXYLATES-DEG; Super-Pathways;; N-Acetylglucosamine-Degradation; Super-Pathways;; N-Acetylglucosamine-Degradation;;
pfam_acc PF01182; PF04198;
pfam_desc Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; Putative sugar-binding domain;
pfam_id Glucosamine_iso; Sugar-bind;
pfam_target db:Pfam-A.hmm|PF01182.20 evalue:8.5e-16 score:57.7 best_domain_score:57.1 name:Glucosamine_iso; db:Pfam-A.hmm|PF04198.13 evalue:1.3e-05 score:23.7 best_domain_score:16.5 name:Sugar-bind;
sprot_desc Glucosamine-6-phosphate deaminase;
sprot_id sp|Q88ZS6|NAGB_LACPL;
sprot_target db:uniprot_sprot|sp|Q88ZS6|NAGB_LACPL 8 239 evalue:2.2e-75 qcov:95.90 identity:61.40;
27365 28078 CDS
ID metaerg.pl|05927
allgo_ids GO:0003700; GO:0006355; GO:0003677; GO:0045892;
allko_ids K00825; K03710;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478221.1 1 235 evalue:1.0e-102 qcov:99.20 identity:80.90;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00392; PF08220; PF07702;
pfam_desc Bacterial regulatory proteins, gntR family; DeoR-like helix-turn-helix domain; UTRA domain;
pfam_id GntR; HTH_DeoR; UTRA;
pfam_target db:Pfam-A.hmm|PF00392.21 evalue:3.6e-22 score:77.0 best_domain_score:76.1 name:GntR; db:Pfam-A.hmm|PF08220.12 evalue:0.00011 score:21.1 best_domain_score:19.8 name:HTH_DeoR; db:Pfam-A.hmm|PF07702.13 evalue:1.7e-37 score:127.7 best_domain_score:126.9 name:UTRA;
sprot_desc HTH-type transcriptional repressor YvoA;
sprot_id sp|O34817|YVOA_BACSU;
sprot_target db:uniprot_sprot|sp|O34817|YVOA_BACSU 5 230 evalue:1.3e-30 qcov:95.40 identity:32.60;
29260 28184 CDS
ID metaerg.pl|05928
allec_ids 2.7.8.-;
allgo_ids GO:0016021; GO:0005886; GO:0016780; GO:0070726;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478222.1 1 358 evalue:1.7e-133 qcov:100.00 identity:71.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-5668; PWY4FS-4; PHOSLIPSYN2-PWY; PWY-6385; PHOSLIPSYN-PWY; TEICHOICACID-PWY;
metacyc_pathway_name cardiolipin biosynthesis I;; phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; peptidoglycan biosynthesis III (mycobacteria);; superpathway of phospholipid biosynthesis I (bacteria);; poly(glycerol phosphate) wall teichoic acid biosynthesis;;
metacyc_pathway_type Cardiolipin-Biosynthesis;; PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; Teichoic-Acids-Biosynthesis;;
pfam_acc PF03816;
pfam_desc Cell envelope-related transcriptional attenuator domain;
pfam_id LytR_cpsA_psr;
pfam_target db:Pfam-A.hmm|PF03816.14 evalue:1e-43 score:148.3 best_domain_score:147.7 name:LytR_cpsA_psr;
sprot_desc Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU;
sprot_id sp|Q65E87|TAGU_BACLD;
sprot_target db:uniprot_sprot|sp|Q65E87|TAGU_BACLD 1 324 evalue:2.0e-43 qcov:90.50 identity:33.80;
tigrfam_acc TIGR00350;
tigrfam_desc cell envelope-related function transcriptional attenuator common domain;
tigrfam_mainrole Regulatory functions;
tigrfam_name lytR_cpsA_psr;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00350 evalue:3e-41 score:140.4 best_domain_score:139.8 name:TIGR00350;
tm_num 1;
29260 28184 transmembrane_helix
ID metaerg.pl|05929
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i28244-28312o;
29395 30477 CDS
ID metaerg.pl|05930
allec_ids 2.7.8.33;
allgo_ids GO:0008963; GO:0016021; GO:0005887; GO:0000287; GO:0030145; GO:0016780; GO:0016757; GO:0036380; GO:0044038; GO:0071555; GO:0009103; GO:0019350;
allko_ids K01000; K02851;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034300646.1 4 359 evalue:1.2e-155 qcov:98.90 identity:81.50;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00953;
pfam_desc Glycosyl transferase family 4;
pfam_id Glycos_transf_4;
pfam_target db:Pfam-A.hmm|PF00953.21 evalue:4e-37 score:126.9 best_domain_score:126.9 name:Glycos_transf_4;
sprot_desc Probable undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase;
sprot_id sp|O34753|TAGO_BACSU;
sprot_target db:uniprot_sprot|sp|O34753|TAGO_BACSU 4 357 evalue:3.4e-56 qcov:98.30 identity:38.80;
tm_num 11;
29395 30477 transmembrane_helix
ID metaerg.pl|05931
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology o29407-29475i29533-29601o29611-29664i29689-29757o29800-29859i29878-29946o29959-30012i30031-30099o30112-30180i30274-30342o30352-30420i;
31593 30526 CDS
ID metaerg.pl|05932
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191443.1 1 355 evalue:2.3e-146 qcov:100.00 identity:77.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF03816;
pfam_desc Cell envelope-related transcriptional attenuator domain;
pfam_id LytR_cpsA_psr;
pfam_target db:Pfam-A.hmm|PF03816.14 evalue:1.7e-38 score:131.4 best_domain_score:130.8 name:LytR_cpsA_psr;
tigrfam_acc TIGR00350;
tigrfam_desc cell envelope-related function transcriptional attenuator common domain;
tigrfam_mainrole Regulatory functions;
tigrfam_name lytR_cpsA_psr;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00350 evalue:3.3e-36 score:124.0 best_domain_score:123.2 name:TIGR00350;
tm_num 1;
31593 30526 transmembrane_helix
ID metaerg.pl|05933
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i30595-30663o;
32378 31743 CDS
ID metaerg.pl|05934
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091488285.1 1 209 evalue:1.1e-71 qcov:99.10 identity:64.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF09186; PF01205;
pfam_desc Domain of unknown function (DUF1949); Uncharacterized protein family UPF0029;
pfam_id DUF1949; UPF0029;
pfam_target db:Pfam-A.hmm|PF09186.11 evalue:1.6e-10 score:39.9 best_domain_score:39.7 name:DUF1949; db:Pfam-A.hmm|PF01205.19 evalue:3.1e-32 score:110.3 best_domain_score:109.7 name:UPF0029;
sprot_desc IMPACT family member YvyE;
sprot_id sp|P32437|YVYE_BACSU;
sprot_target db:uniprot_sprot|sp|P32437|YVYE_BACSU 1 206 evalue:2.1e-53 qcov:97.60 identity:50.00;
tigrfam_acc TIGR00257;
tigrfam_desc uncharacterized protein, YigZ family;
tigrfam_mainrole Unknown function;
tigrfam_name IMPACT_YIGZ;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00257 evalue:2.7e-67 score:225.4 best_domain_score:225.2 name:TIGR00257;
32504 33361 CDS
ID metaerg.pl|05935
allgo_ids GO:0008289;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478225.1 1 285 evalue:1.6e-118 qcov:100.00 identity:74.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF02645;
pfam_desc Uncharacterised protein, DegV family COG1307;
pfam_id DegV;
pfam_target db:Pfam-A.hmm|PF02645.16 evalue:1.2e-88 score:296.3 best_domain_score:296.2 name:DegV;
sprot_desc DegV domain-containing protein lin2658;
sprot_id sp|Q927X9|Y2658_LISIN;
sprot_target db:uniprot_sprot|sp|Q927X9|Y2658_LISIN 2 279 evalue:2.6e-59 qcov:97.50 identity:45.20;
tigrfam_acc TIGR00762;
tigrfam_desc EDD domain protein, DegV family;
tigrfam_mainrole Unknown function;
tigrfam_name DegV;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00762 evalue:5.4e-96 score:320.2 best_domain_score:320.0 name:TIGR00762;
33491 34840 CDS
ID metaerg.pl|05936
allec_ids 3.6.4.12;
allgo_ids GO:0003676; GO:0005524; GO:0005737; GO:0043140; GO:0003677; GO:0006310; GO:0006270; GO:0006268; GO:0006302; GO:0030420;
allko_ids K10896; K05591; K02240;
casgene_acc cd09639_cas3_CAS-I;
casgene_name cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:2.1e-10 score:39.4 best_domain_score:32.8 name:cas3;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191452.1 1 448 evalue:4.6e-144 qcov:99.80 identity:59.90;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00270; PF00271; PF04851;
pfam_desc DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit;
pfam_id DEAD; Helicase_C; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:8.2e-11 score:41.2 best_domain_score:24.4 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:1.7e-14 score:53.4 best_domain_score:50.9 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:5.5e-10 score:38.7 best_domain_score:28.5 name:ResIII;
sprot_desc ComF operon protein 1;
sprot_id sp|P39145|COMFA_BACSU;
sprot_target db:uniprot_sprot|sp|P39145|COMFA_BACSU 23 444 evalue:1.4e-78 qcov:94.00 identity:40.20;
34837 35529 CDS
ID metaerg.pl|05937
allgo_ids GO:0009116; GO:0030420;
allko_ids K00762; K02242;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848398.1 1 230 evalue:3.1e-51 qcov:100.00 identity:46.30;
kegg_pathway_id 00983; 03090; 00240;
kegg_pathway_name Drug metabolism - other enzymes; Type II secretion system; Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:1.3e-09 score:37.0 best_domain_score:36.5 name:Pribosyltran;
sprot_desc ComF operon protein 3;
sprot_id sp|P39147|COMFC_BACSU;
sprot_target db:uniprot_sprot|sp|P39147|COMFC_BACSU 4 230 evalue:3.8e-24 qcov:98.70 identity:33.90;
35674 36240 CDS
ID metaerg.pl|05938
allgo_ids GO:0044238; GO:0005737; GO:0006417;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium subtropicum;
genomedb_acc GCF_900112455.1;
genomedb_target db:genomedb|GCF_900112455.1|WP_091529570.1 1 188 evalue:3.9e-97 qcov:100.00 identity:95.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF02482; PF16321;
pfam_desc Sigma 54 modulation protein / S30EA ribosomal protein; Sigma 54 modulation/S30EA ribosomal protein C terminus;
pfam_id Ribosomal_S30AE; Ribosom_S30AE_C;
pfam_target db:Pfam-A.hmm|PF02482.19 evalue:1.9e-30 score:104.7 best_domain_score:104.1 name:Ribosomal_S30AE; db:Pfam-A.hmm|PF16321.5 evalue:2.7e-27 score:93.4 best_domain_score:92.7 name:Ribosom_S30AE_C;
sprot_desc Ribosome hibernation promotion factor;
sprot_id sp|A0A0H3GEZ8|HPF_LISM4;
sprot_target db:uniprot_sprot|sp|A0A0H3GEZ8|HPF_LISM4 1 188 evalue:8.9e-64 qcov:100.00 identity:63.30;
tigrfam_acc TIGR00741;
tigrfam_desc ribosomal subunit interface protein;
tigrfam_mainrole Protein synthesis;
tigrfam_name yfiA;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00741 evalue:1.6e-30 score:104.7 best_domain_score:104.1 name:TIGR00741;
36416 38881 CDS
ID metaerg.pl|05939
allgo_ids GO:0005524; GO:0016020; GO:0017038; GO:0005737; GO:0005886; GO:0046872; GO:0065002; GO:0006605;
allko_ids K03070;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191459.1 1 821 evalue:0.0e+00 qcov:100.00 identity:91.60;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF07517; PF01043; PF07516;
pfam_desc SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain;
pfam_id SecA_DEAD; SecA_PP_bind; SecA_SW;
pfam_target db:Pfam-A.hmm|PF07517.14 evalue:4.7e-128 score:425.8 best_domain_score:424.9 name:SecA_DEAD; db:Pfam-A.hmm|PF01043.20 evalue:8.5e-41 score:138.3 best_domain_score:137.1 name:SecA_PP_bind; db:Pfam-A.hmm|PF07516.13 evalue:6.6e-59 score:198.6 best_domain_score:198.6 name:SecA_SW;
sprot_desc hypothetical protein;
sprot_id sp|Q834A7|SECA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q834A7|SECA_ENTFA 1 790 evalue:0.0e+00 qcov:96.20 identity:73.50;
tigrfam_acc TIGR00963;
tigrfam_desc preprotein translocase, SecA subunit;
tigrfam_mainrole Protein fate;
tigrfam_name secA;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00963 evalue:0 score:1088.5 best_domain_score:791.7 name:TIGR00963;
39001 40053 CDS
ID metaerg.pl|05940
allgo_ids GO:0006415; GO:0005737; GO:0016149;
allko_ids K02836;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265188.1 1 350 evalue:2.6e-163 qcov:100.00 identity:82.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF03462; PF00472;
pfam_desc PCRF domain; RF-1 domain;
pfam_id PCRF; RF-1;
pfam_target db:Pfam-A.hmm|PF03462.18 evalue:1.1e-61 score:207.4 best_domain_score:205.8 name:PCRF; db:Pfam-A.hmm|PF00472.20 evalue:5.9e-41 score:138.3 best_domain_score:138.3 name:RF-1;
sprot_desc Peptide chain release factor 2;
sprot_id sp|Q927Y4|RF2_LISIN;
sprot_target db:uniprot_sprot|sp|Q927Y4|RF2_LISIN 1 346 evalue:7.3e-128 qcov:98.90 identity:64.70;
tigrfam_acc TIGR00020;
tigrfam_desc peptide chain release factor 2;
tigrfam_mainrole Protein synthesis;
tigrfam_name prfB;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00020 evalue:2.5e-157 score:522.6 best_domain_score:522.5 name:TIGR00020;
40626 41312 CDS
ID metaerg.pl|05941
allgo_ids GO:0005524; GO:0031234; GO:0005886; GO:0016887; GO:0022857; GO:0008356; GO:0051301; GO:0090529; GO:0045881; GO:0070297; GO:0055085;
allko_ids K02000; K11962; K10000; K02018; K02023; K09812; K01990; K10243; K11076; K05816; K10235; K10562; K10111; K01998; K10112; K02031; K02049; K01995; K02065; K11072; K02045; K02068; K10199; K10441; K01996; K06861; K02071; K09811; K02017; K02032; K11084; K02004; K02006; K02052; K05847; K02056; K02010; K02003; K01997;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478234.1 1 227 evalue:7.1e-117 qcov:99.60 identity:94.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.7e-07 score:30.6 best_domain_score:20.2 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:5.3e-33 score:113.7 best_domain_score:113.3 name:ABC_tran;
sprot_desc Cell division ATP-binding protein FtsE;
sprot_id sp|O34814|FTSE_BACSU;
sprot_target db:uniprot_sprot|sp|O34814|FTSE_BACSU 1 224 evalue:1.5e-84 qcov:98.20 identity:65.60;
tigrfam_acc TIGR02673;
tigrfam_desc cell division ATP-binding protein FtsE;
tigrfam_mainrole Cellular processes;
tigrfam_name FtsE;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR02673 evalue:1.1e-87 score:292.4 best_domain_score:292.2 name:TIGR02673;
41302 42189 CDS
ID metaerg.pl|05942
allgo_ids GO:0016020; GO:0016021; GO:0005886; GO:0007049; GO:0051301; GO:0070098; GO:0045881;
allko_ids K02004; K09808; K09811;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478235.1 1 295 evalue:3.6e-137 qcov:100.00 identity:88.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF02687; PF18075;
pfam_desc FtsX-like permease family; FtsX extracellular domain;
pfam_id FtsX; FtsX_ECD;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:2.3e-07 score:30.4 best_domain_score:30.4 name:FtsX; db:Pfam-A.hmm|PF18075.1 evalue:1.3e-18 score:66.6 best_domain_score:66.0 name:FtsX_ECD;
sprot_desc Cell division protein FtsX;
sprot_id sp|Q81X30|FTSX_BACAN;
sprot_target db:uniprot_sprot|sp|Q81X30|FTSX_BACAN 1 295 evalue:4.6e-75 qcov:100.00 identity:51.00;
tm_num 4;
41302 42189 transmembrane_helix
ID metaerg.pl|05943
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i41362-41430o41818-41886i41968-42036o42094-42162i;
42268 43422 CDS
ID metaerg.pl|05944
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478237.1 1 384 evalue:1.7e-110 qcov:100.00 identity:60.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00877;
pfam_desc NlpC/P60 family;
pfam_id NLPC_P60;
pfam_target db:Pfam-A.hmm|PF00877.19 evalue:7.9e-27 score:92.6 best_domain_score:91.5 name:NLPC_P60;
sp YES;
42268 42357 signal_peptide
ID metaerg.pl|05945
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
43674 44876 CDS
ID metaerg.pl|05946
allgo_ids GO:0005515; GO:0016021; GO:0005886; GO:0000917;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265180.1 1 400 evalue:4.3e-162 qcov:100.00 identity:71.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF13180; PF17820;
pfam_desc PDZ domain; PDZ domain;
pfam_id PDZ_2; PDZ_6;
pfam_target db:Pfam-A.hmm|PF13180.6 evalue:1.5e-08 score:34.1 best_domain_score:32.7 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:1e-07 score:30.9 best_domain_score:29.9 name:PDZ_6;
sprot_desc Cell division topological determinant MinJ;
sprot_id sp|O34375|MINJ_BACSU;
sprot_target db:uniprot_sprot|sp|O34375|MINJ_BACSU 13 395 evalue:1.4e-29 qcov:95.80 identity:26.20;
tm_num 9;
43674 44876 transmembrane_helix
ID metaerg.pl|05947
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology o43701-43769i43839-43907o43920-43979i43998-44066o44109-44177i44235-44291o44319-44387i44445-44501o44511-44564i;
45129 45431 CDS
ID metaerg.pl|05948
allgo_ids GO:0003700; GO:0006355; GO:0003677; GO:0046872;
allko_ids K21903;
casgene_acc cd09655_casR_CAS-I; cls001593_casR_CAS-I; COG0640_csa3_CAS-I-A;
casgene_name casR; casR; csa3;
casgene_target db:casgenes.hmm|cd09655_casR_CAS-I evalue:4.5e-06 score:25.6 best_domain_score:25.0 name:casR; db:casgenes.hmm|cls001593_casR_CAS-I evalue:2.1e-07 score:29.6 best_domain_score:29.4 name:casR; db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:2.1e-16 score:59.6 best_domain_score:59.5 name:csa3;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478239.1 7 97 evalue:1.1e-18 qcov:91.00 identity:53.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF12840; PF01022;
pfam_desc Helix-turn-helix domain; Bacterial regulatory protein, arsR family;
pfam_id HTH_20; HTH_5;
pfam_target db:Pfam-A.hmm|PF12840.7 evalue:8e-11 score:41.1 best_domain_score:40.4 name:HTH_20; db:Pfam-A.hmm|PF01022.20 evalue:2.6e-12 score:45.6 best_domain_score:44.8 name:HTH_5;
sprot_desc Transcriptional repressor SmtB homolog;
sprot_id sp|Q55940|ZIAR_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55940|ZIAR_SYNY3 9 95 evalue:5.5e-12 qcov:87.00 identity:40.20;
45428 46549 CDS
ID metaerg.pl|05949
allgo_ids GO:0006812; GO:0008324; GO:0016021; GO:0055085; GO:0005794; GO:0005774; GO:0071578;
allko_ids K14692;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265175.1 1 366 evalue:1.6e-126 qcov:98.10 identity:62.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF01545; PF00403;
pfam_desc Cation efflux family; Heavy-metal-associated domain;
pfam_id Cation_efflux; HMA;
pfam_target db:Pfam-A.hmm|PF01545.21 evalue:7.8e-40 score:136.0 best_domain_score:135.7 name:Cation_efflux; db:Pfam-A.hmm|PF00403.26 evalue:4.6e-06 score:26.2 best_domain_score:16.6 name:HMA;
sprot_desc Metal tolerance protein 12;
sprot_id sp|Q9SI03|MTP12_ARATH;
sprot_target db:uniprot_sprot|sp|Q9SI03|MTP12_ARATH 85 362 evalue:2.5e-25 qcov:74.50 identity:27.70;
tigrfam_acc TIGR01297;
tigrfam_desc cation diffusion facilitator family transporter;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name CDF;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01297 evalue:1e-59 score:201.3 best_domain_score:201.1 name:TIGR01297;
tm_num 5;
45428 46549 transmembrane_helix
ID metaerg.pl|05950
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i45725-45793o45917-45985i46019-46078o46106-46174i46187-46255o;
46610 47275 CDS
ID metaerg.pl|05951
allec_ids 3.1.3.89;
allgo_ids GO:0005737; GO:0002953; GO:0046872; GO:0000166;
allko_ids K08722;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478241.1 1 219 evalue:7.6e-108 qcov:99.10 identity:88.10;
kegg_pathway_id 00760; 00230; 00240;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Purine metabolism; Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF12917; PF13023;
pfam_desc HD containing hydrolase-like enzyme ; HD domain;
pfam_id HD_2; HD_3;
pfam_target db:Pfam-A.hmm|PF12917.7 evalue:7.5e-51 score:171.7 best_domain_score:171.4 name:HD_2; db:Pfam-A.hmm|PF13023.6 evalue:1.1e-09 score:37.7 best_domain_score:37.1 name:HD_3;
sprot_desc 5'-deoxynucleotidase PM0747;
sprot_id sp|Q9CMR5|5DNU_PASMU;
sprot_target db:uniprot_sprot|sp|Q9CMR5|5DNU_PASMU 1 187 evalue:1.8e-10 qcov:84.60 identity:24.50;
47438 50278 CDS
ID metaerg.pl|05952
allec_ids 3.1.25.-;
allgo_ids GO:0005524; GO:0016887; GO:0005737; GO:0009380; GO:0003677; GO:0009381; GO:0008270; GO:0006289; GO:0009432;
allko_ids K10111; K01995; K01996; K06861; K02045; K02006; K05847; K03701;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265170.1 1 939 evalue:0.0e+00 qcov:99.30 identity:89.40;
kegg_pathway_id 02010; 03420;
kegg_pathway_name ABC transporters - General; Nucleotide excision repair;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF13191; PF00005; PF03193; PF02463; PF17755; PF17760;
pfam_desc AAA ATPase domain; ABC transporter; RsgA GTPase; RecF/RecN/SMC N terminal domain; UvrA DNA-binding domain; UvrA interaction domain;
pfam_id AAA_16; ABC_tran; RsgA_GTPase; SMC_N; UvrA_DNA-bind; UvrA_inter;
pfam_target db:Pfam-A.hmm|PF13191.6 evalue:2.2e-09 score:37.1 best_domain_score:20.9 name:AAA_16; db:Pfam-A.hmm|PF00005.27 evalue:2.4e-22 score:79.2 best_domain_score:37.1 name:ABC_tran; db:Pfam-A.hmm|PF03193.16 evalue:5.8e-08 score:32.0 best_domain_score:19.8 name:RsgA_GTPase; db:Pfam-A.hmm|PF02463.19 evalue:2.8e-12 score:45.8 best_domain_score:20.3 name:SMC_N; db:Pfam-A.hmm|PF17755.1 evalue:3e-35 score:120.1 best_domain_score:116.2 name:UvrA_DNA-bind; db:Pfam-A.hmm|PF17760.1 evalue:2.6e-41 score:139.3 best_domain_score:135.8 name:UvrA_inter;
sprot_desc UvrABC system protein A;
sprot_id sp|Q8Y4F6|UVRA_LISMO;
sprot_target db:uniprot_sprot|sp|Q8Y4F6|UVRA_LISMO 1 939 evalue:0.0e+00 qcov:99.30 identity:73.80;
tigrfam_acc TIGR00630;
tigrfam_desc excinuclease ABC subunit A;
tigrfam_mainrole DNA metabolism;
tigrfam_name uvra;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00630 evalue:0 score:1472.1 best_domain_score:1471.9 name:TIGR00630;
50413 52110 CDS
ID metaerg.pl|05953
allko_ids K00205; K11260;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191483.1 1 565 evalue:1.1e-190 qcov:100.00 identity:63.00;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF13349;
pfam_desc Putative adhesin;
pfam_id DUF4097;
pfam_target db:Pfam-A.hmm|PF13349.6 evalue:6.9e-19 score:67.4 best_domain_score:67.4 name:DUF4097;
52138 52440 CDS
ID metaerg.pl|05954
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191485.1 1 100 evalue:3.5e-36 qcov:100.00 identity:82.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF04024;
pfam_desc PspC domain;
pfam_id PspC;
pfam_target db:Pfam-A.hmm|PF04024.12 evalue:1.1e-17 score:62.8 best_domain_score:62.5 name:PspC;
tm_num 1;
52138 52440 transmembrane_helix
ID metaerg.pl|05955
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i52234-52302o;
52444 52776 CDS
ID metaerg.pl|05956
allgo_ids GO:0016021; GO:0005886;
allko_ids K08972;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848408.1 1 109 evalue:5.8e-40 qcov:99.10 identity:83.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF04020;
pfam_desc Mycobacterial 4 TMS phage holin, superfamily IV;
pfam_id Phage_holin_4_2;
pfam_target db:Pfam-A.hmm|PF04020.13 evalue:2.5e-29 score:101.3 best_domain_score:101.1 name:Phage_holin_4_2;
sprot_desc Uncharacterized membrane protein YvlD;
sprot_id sp|O34648|YVLD_BACSU;
sprot_target db:uniprot_sprot|sp|O34648|YVLD_BACSU 1 103 evalue:8.7e-11 qcov:93.60 identity:34.60;
tm_num 4;
52444 52776 transmembrane_helix
ID metaerg.pl|05957
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i52462-52530o52540-52608i52627-52695o52708-52761i;
53005 53943 CDS
ID metaerg.pl|05958
allec_ids 2.7.11.-; 2.7.1.-;
allgo_ids GO:0000155; GO:0000160; GO:0004672; GO:0005524; GO:0006109; GO:0000287; GO:0004674; GO:0004712; GO:0005975;
allko_ids K06023;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478252.1 2 312 evalue:9.9e-154 qcov:99.70 identity:90.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PLPSAL-PWY; PWY-5107; PWY0-1261; PWY-6577; LIPA-CORESYN-PWY; PWY-5381; P1-PWY; PWY0-163; LPSSYN-PWY; PWY0-845;
metacyc_pathway_name pyridoxal 5'-phosphate salvage I;; phytol salvage pathway;; anhydromuropeptides recycling I;; farnesylcysteine salvage pathway;; lipid A-core biosynthesis (E. coli K-12);; pyridine nucleotide cycling (plants);; ; ; superpathway of lipopolysaccharide biosynthesis;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;;
metacyc_pathway_type Vitamin-B6-Biosynthesis;; DITERPENOID-SYN;; Anhydromuropeptides-Recycling;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Glycan-Biosynthesis; Lipid-Biosynthesis;; NAD-Metabolism;; ; ; Lipid-Biosynthesis; Super-Pathways;; Super-Pathways; Vitamin-B6-Biosynthesis;;
pfam_acc PF07475; PF02603;
pfam_desc HPr Serine kinase C-terminal domain; HPr Serine kinase N terminus;
pfam_id Hpr_kinase_C; Hpr_kinase_N;
pfam_target db:Pfam-A.hmm|PF07475.12 evalue:2.5e-72 score:241.2 best_domain_score:240.7 name:Hpr_kinase_C; db:Pfam-A.hmm|PF02603.16 evalue:1.5e-38 score:130.8 best_domain_score:130.3 name:Hpr_kinase_N;
sprot_desc HPr kinase/phosphorylase;
sprot_id sp|Q38YB1|HPRK_LACSS;
sprot_target db:uniprot_sprot|sp|Q38YB1|HPRK_LACSS 1 311 evalue:2.7e-105 qcov:99.70 identity:59.60;
tigrfam_acc TIGR00679;
tigrfam_desc HPr(Ser) kinase/phosphatase;
tigrfam_mainrole Signal transduction;
tigrfam_name hpr-ser;
tigrfam_sub1role PTS;
tigrfam_target db:TIGRFAMs.hmm|TIGR00679 evalue:5.2e-111 score:369.8 best_domain_score:369.6 name:TIGR00679;
53958 54830 CDS
ID metaerg.pl|05959
allec_ids 2.5.1.145; 2.4.99.-;
allgo_ids GO:0016020; GO:0016757; GO:0042158; GO:0005887; GO:0008961;
allko_ids K13292;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848410.1 1 290 evalue:6.4e-139 qcov:100.00 identity:81.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-6467;
metacyc_pathway_name Kdo transfer to lipid IVA III (Chlamydia);;
metacyc_pathway_type KDO-Lipid-IV-Transfer; Super-Pathways;;
pfam_acc PF01790;
pfam_desc Prolipoprotein diacylglyceryl transferase;
pfam_id LGT;
pfam_target db:Pfam-A.hmm|PF01790.18 evalue:2.3e-78 score:262.0 best_domain_score:261.8 name:LGT;
sprot_desc Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase;
sprot_id sp|B8DBM9|LGT_LISMH;
sprot_target db:uniprot_sprot|sp|B8DBM9|LGT_LISMH 1 271 evalue:2.3e-82 qcov:93.40 identity:56.80;
tigrfam_acc TIGR00544;
tigrfam_desc prolipoprotein diacylglyceryl transferase;
tigrfam_mainrole Protein fate;
tigrfam_name lgt;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00544 evalue:5.4e-70 score:235.1 best_domain_score:234.8 name:TIGR00544;
tm_num 7;
53958 54830 transmembrane_helix
ID metaerg.pl|05960
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology o54000-54068i54105-54173o54216-54284i54303-54371o54480-54548i54582-54629o54672-54740i;
54855 55856 CDS
ID metaerg.pl|05961
allec_ids 1.1.1.94;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0009331; GO:0047952; GO:0004367; GO:0051287; GO:0005975; GO:0046167; GO:0046168; GO:0006650; GO:0008654;
allko_ids K00006; K00057;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp002500855;
genomedb_acc GCA_002500855.1;
genomedb_target db:genomedb|GCA_002500855.1|DLTL01000167.1_8 1 333 evalue:4.6e-141 qcov:100.00 identity:77.50;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-5667; PHOSLIPSYN2-PWY; PHOSLIPSYN-PWY; PWY4FS-8; PWY0-1319; PWY4FS-7; PWY-5981;
metacyc_pathway_name CDP-diacylglycerol biosynthesis I;; superpathway of phospholipid biosynthesis II (plants);; superpathway of phospholipid biosynthesis I (bacteria);; phosphatidylglycerol biosynthesis II (non-plastidic);; CDP-diacylglycerol biosynthesis II;; phosphatidylglycerol biosynthesis I (plastidic);; CDP-diacylglycerol biosynthesis III;;
metacyc_pathway_type CDP-diacylglycerol-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;;
pfam_acc PF02737; PF02558; PF03807; PF07991; PF03446; PF07479; PF01210;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Ketopantoate reductase PanE/ApbA; NADP oxidoreductase coenzyme F420-dependent; Acetohydroxy acid isomeroreductase, NADPH-binding domain; NAD binding domain of 6-phosphogluconate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus;
pfam_id 3HCDH_N; ApbA; F420_oxidored; IlvN; NAD_binding_2; NAD_Gly3P_dh_C; NAD_Gly3P_dh_N;
pfam_target db:Pfam-A.hmm|PF02737.18 evalue:1.7e-05 score:24.0 best_domain_score:21.6 name:3HCDH_N; db:Pfam-A.hmm|PF02558.16 evalue:1.5e-08 score:33.7 best_domain_score:32.7 name:ApbA; db:Pfam-A.hmm|PF03807.17 evalue:2.8e-10 score:39.9 best_domain_score:38.1 name:F420_oxidored; db:Pfam-A.hmm|PF07991.12 evalue:5.5e-06 score:25.3 best_domain_score:22.6 name:IlvN; db:Pfam-A.hmm|PF03446.15 evalue:1.3e-08 score:34.4 best_domain_score:31.1 name:NAD_binding_2; db:Pfam-A.hmm|PF07479.14 evalue:2.8e-53 score:179.2 best_domain_score:178.4 name:NAD_Gly3P_dh_C; db:Pfam-A.hmm|PF01210.23 evalue:1.3e-56 score:190.1 best_domain_score:189.1 name:NAD_Gly3P_dh_N;
sp YES;
sprot_desc Glycerol-3-phosphate dehydrogenase [NAD(P)+];
sprot_id sp|Q88YK1|GPDA_LACPL;
sprot_target db:uniprot_sprot|sp|Q88YK1|GPDA_LACPL 1 333 evalue:1.1e-117 qcov:100.00 identity:63.20;
54855 54908 signal_peptide
ID metaerg.pl|05962
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
55900 56841 CDS
ID metaerg.pl|05963
allec_ids 2.7.7.9;
allgo_ids GO:0009058; GO:0016779; GO:0003983; GO:0006011;
allko_ids K01840; K02536; K00963; K04042; K00640; K01835; K00677; K00975; K00972; K11528; K00966;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265145.1 2 312 evalue:7.6e-162 qcov:99.40 identity:92.90;
kegg_pathway_id 00051; 00052; 00040; 00530; 00030; 00010; 00520; 00920; 00540; 00521; 00272; 00500;
kegg_pathway_name Fructose and mannose metabolism; Galactose metabolism; Pentose and glucuronate interconversions; Aminosugars metabolism; Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Nucleotide sugars metabolism; Sulfur metabolism; Lipopolysaccharide biosynthesis; Streptomycin biosynthesis; Cysteine metabolism; Starch and sucrose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id SUCSYN-PWY; PWY-3821; PWY-5067; COLANSYN-PWY; PWY-621; PWY-3801; PWY-5114;
metacyc_pathway_name sucrose biosynthesis I (from photosynthesis);; D-galactose detoxification;; glycogen biosynthesis II (from UDP-D-Glucose);; colanic acid building blocks biosynthesis;; sucrose degradation III (sucrose invertase);; sucrose degradation II (sucrose synthase);; UDP-sugars interconversion;;
metacyc_pathway_type Sucrose-Biosynthesis; Super-Pathways;; Detoxification;; GLYCOGEN-BIOSYN;; Carbohydrates-Biosynthesis; Super-Pathways;; SUCROSE-DEG;; SUCROSE-DEG;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;;
pfam_acc PF00483; PF12804;
pfam_desc Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF00483.23 evalue:3.7e-34 score:117.6 best_domain_score:117.3 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:1.7e-06 score:27.7 best_domain_score:27.2 name:NTP_transf_3;
sprot_desc UTP--glucose-1-phosphate uridylyltransferase 1;
sprot_id sp|Q8NKW9|HASC1_STRP8;
sprot_target db:uniprot_sprot|sp|Q8NKW9|HASC1_STRP8 4 296 evalue:3.4e-124 qcov:93.60 identity:74.10;
tigrfam_acc TIGR01099;
tigrfam_desc UTP--glucose-1-phosphate uridylyltransferase;
tigrfam_mainrole Cell envelope;
tigrfam_name galU;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01099 evalue:4.9e-111 score:369.6 best_domain_score:369.4 name:TIGR01099;
57027 57983 CDS
ID metaerg.pl|05964
allec_ids 1.8.1.9;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0004791; GO:0019430;
allko_ids K00383; K03388; K00384; K00302; K00266; K00382;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265142.1 1 315 evalue:2.7e-159 qcov:99.10 identity:89.50;
kegg_pathway_id 00240; 00020; 00260; 00280; 00480; 00010; 00790; 00251; 00252; 00620; 00910;
kegg_pathway_name Pyrimidine metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Valine, leucine and isoleucine degradation; Glutathione metabolism; Glycolysis / Gluconeogenesis; Folate biosynthesis; Glutamate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Nitrogen metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id THIOREDOX-PWY;
metacyc_pathway_name thioredoxin pathway;;
metacyc_pathway_type Reductants;;
pfam_acc PF00890; PF12831; PF01134; PF13434; PF13450; PF00070; PF07992; PF13738; PF01946;
pfam_desc FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; L-lysine 6-monooxygenase (NADPH-requiring); NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Thi4 family;
pfam_id FAD_binding_2; FAD_oxidored; GIDA; K_oxygenase; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Thi4;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:2.3e-08 score:32.8 best_domain_score:26.5 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:4.1e-07 score:28.9 best_domain_score:28.6 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:2.4e-06 score:26.1 best_domain_score:20.1 name:GIDA; db:Pfam-A.hmm|PF13434.6 evalue:3.6e-05 score:22.3 best_domain_score:13.8 name:K_oxygenase; db:Pfam-A.hmm|PF13450.6 evalue:8.7e-06 score:25.1 best_domain_score:23.7 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:1.2e-18 score:66.7 best_domain_score:64.9 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:8.5e-50 score:168.9 best_domain_score:168.6 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:8.1e-24 score:83.6 best_domain_score:61.5 name:Pyr_redox_3; db:Pfam-A.hmm|PF01946.17 evalue:2.7e-08 score:32.6 best_domain_score:25.4 name:Thi4;
sprot_desc Thioredoxin reductase;
sprot_id sp|Q928B5|TRXB_LISIN;
sprot_target db:uniprot_sprot|sp|Q928B5|TRXB_LISIN 1 318 evalue:1.4e-114 qcov:100.00 identity:63.30;
tigrfam_acc TIGR01292;
tigrfam_desc thioredoxin-disulfide reductase;
tigrfam_mainrole Energy metabolism;
tigrfam_name TRX_reduct;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01292 evalue:1.9e-115 score:384.0 best_domain_score:383.8 name:TIGR01292;
tm_num 1;
57027 57983 transmembrane_helix
ID metaerg.pl|05965
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i57045-57104o;
58203 59930 CDS
ID metaerg.pl|05966
allec_ids 5.4.2.2;
allgo_ids GO:0005975; GO:0016868; GO:0000287; GO:0004614; GO:0009246; GO:0006006;
allko_ids K01840; K01835; K01842; K03431;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478260.1 1 573 evalue:2.5e-264 qcov:99.70 identity:79.20;
kegg_pathway_id 00051; 00030; 00010; 00052; 00500; 00530; 00521;
kegg_pathway_name Fructose and mannose metabolism; Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Galactose metabolism; Starch and sucrose metabolism; Aminosugars metabolism; Streptomycin biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-5384; PWY-621; PWY-3801; PWY-5941; PWY-5940; SUCSYN-PWY; PWY-622; GLYCOCAT-PWY; PWY-5767; PWY-842; PWY-5661;
metacyc_pathway_name sucrose degradation IV (sucrose phosphorylase);; sucrose degradation III (sucrose invertase);; sucrose degradation II (sucrose synthase);; glycogen degradation II;; streptomycin biosynthesis;; sucrose biosynthesis I (from photosynthesis);; starch biosynthesis;; glycogen degradation I;; ; starch degradation I;; GDP-glucose biosynthesis;;
metacyc_pathway_type SUCROSE-DEG;; SUCROSE-DEG;; SUCROSE-DEG;; Glycan-Degradation; Glycogen-Degradation;; Antibiotic-Biosynthesis;; Sucrose-Biosynthesis; Super-Pathways;; GLYCOGEN-BIOSYN;; Glycan-Degradation; Glycogen-Degradation;; ; Glycan-Degradation; Starch-Degradation;; GDP-Sugar-Biosynthesis;;
pfam_acc PF02878; PF02879; PF02880; PF00408;
pfam_desc Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain;
pfam_id PGM_PMM_I; PGM_PMM_II; PGM_PMM_III; PGM_PMM_IV;
pfam_target db:Pfam-A.hmm|PF02878.16 evalue:3e-43 score:146.1 best_domain_score:144.6 name:PGM_PMM_I; db:Pfam-A.hmm|PF02879.16 evalue:4.4e-26 score:90.7 best_domain_score:89.4 name:PGM_PMM_II; db:Pfam-A.hmm|PF02880.16 evalue:2.2e-18 score:65.7 best_domain_score:64.9 name:PGM_PMM_III; db:Pfam-A.hmm|PF00408.20 evalue:1.3e-09 score:37.3 best_domain_score:35.0 name:PGM_PMM_IV;
sprot_desc Phosphoglucomutase;
sprot_id sp|P18159|PGCA_BACSU;
sprot_target db:uniprot_sprot|sp|P18159|PGCA_BACSU 1 573 evalue:2.6e-170 qcov:99.70 identity:52.00;
59957 60154 CDS
ID metaerg.pl|05967
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265138.1 1 64 evalue:4.2e-14 qcov:98.50 identity:56.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF11127;
pfam_desc Protein of unknown function (DUF2892);
pfam_id DUF2892;
pfam_target db:Pfam-A.hmm|PF11127.8 evalue:2.1e-15 score:55.8 best_domain_score:55.6 name:DUF2892;
tm_num 2;
59957 60154 transmembrane_helix
ID metaerg.pl|05968
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i59990-60049o60062-60130i;
60232 61200 CDS
ID metaerg.pl|05969
allgo_ids GO:0005524; GO:0005525;
allko_ids K06958;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265135.1 28 322 evalue:1.9e-147 qcov:91.60 identity:88.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF03668;
pfam_desc P-loop ATPase protein family;
pfam_id ATP_bind_2;
pfam_target db:Pfam-A.hmm|PF03668.15 evalue:4.4e-115 score:383.1 best_domain_score:382.8 name:ATP_bind_2;
sprot_desc Nucleotide-binding protein EF_0766;
sprot_id sp|Q837R5|Y766_ENTFA;
sprot_target db:uniprot_sprot|sp|Q837R5|Y766_ENTFA 28 322 evalue:2.8e-110 qcov:91.60 identity:66.80;
61197 62213 CDS
ID metaerg.pl|05970
allgo_ids GO:0005737; GO:0008360;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478265.1 1 337 evalue:5.5e-166 qcov:99.70 identity:86.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF01933;
pfam_desc Uncharacterised protein family UPF0052;
pfam_id UPF0052;
pfam_target db:Pfam-A.hmm|PF01933.18 evalue:6.9e-91 score:303.7 best_domain_score:303.5 name:UPF0052;
sprot_desc Putative gluconeogenesis factor;
sprot_id sp|Q97PN8|GNGF_STRPN;
sprot_target db:uniprot_sprot|sp|Q97PN8|GNGF_STRPN 9 325 evalue:1.9e-96 qcov:93.80 identity:54.10;
tigrfam_acc TIGR01826;
tigrfam_desc conserved hypothetical protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name CofD_related;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR01826 evalue:1.7e-105 score:352.0 best_domain_score:351.7 name:TIGR01826;
62245 63183 CDS
ID metaerg.pl|05971
allgo_ids GO:0004519; GO:0003677; GO:0007049; GO:0051301; GO:0043937;
allko_ids K09762;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265131.1 1 312 evalue:2.2e-153 qcov:100.00 identity:89.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF02650; PF14528; PF14527; PF10298;
pfam_desc WhiA C-terminal HTH domain; LAGLIDADG-like domain; WhiA LAGLIDADG-like domain; WhiA N-terminal LAGLIDADG-like domain;
pfam_id HTH_WhiA; LAGLIDADG_3; LAGLIDADG_WhiA; WhiA_N;
pfam_target db:Pfam-A.hmm|PF02650.14 evalue:1.9e-37 score:126.7 best_domain_score:125.6 name:HTH_WhiA; db:Pfam-A.hmm|PF14528.6 evalue:2.7e-06 score:26.8 best_domain_score:21.1 name:LAGLIDADG_3; db:Pfam-A.hmm|PF14527.6 evalue:2.8e-39 score:132.3 best_domain_score:123.0 name:LAGLIDADG_WhiA; db:Pfam-A.hmm|PF10298.9 evalue:4.6e-38 score:128.4 best_domain_score:126.8 name:WhiA_N;
sprot_desc Probable cell division protein WhiA;
sprot_id sp|Q837R3|WHIA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q837R3|WHIA_ENTFA 1 311 evalue:6.3e-123 qcov:99.70 identity:71.10;
tigrfam_acc TIGR00647;
tigrfam_desc DNA-binding protein WhiA;
tigrfam_mainrole Cellular processes;
tigrfam_name DNA_bind_WhiA;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR00647 evalue:4.6e-123 score:409.5 best_domain_score:409.3 name:TIGR00647;
63684 64997 CDS
ID metaerg.pl|05972
allec_ids 7.1.1.-;
allgo_ids GO:0006814; GO:0016655; GO:0055114; GO:0005886; GO:0051539; GO:0009055; GO:0046872;
allko_ids K00240; K00246; K00123; K03390; K00443; K03943; K11260; K00122; K05586; K00245; K00356; K00235; K00873; K00204; K00125; K00329; K00335; K00226; K00334; K03942; K00205; K00441; K00171; K00390; K08264; K03388; K05587; K11181; K00436; K00124; K00265; K03615;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478269.1 1 437 evalue:7.4e-232 qcov:100.00 identity:89.00;
kegg_pathway_id 00720; 00632; 00240; 00620; 00790; 00650; 00640; 00630; 05012; 00710; 00010; 00920; 00230; 00020; 00910; 02020; 00633; 00251; 00680; 00130; 00190;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Benzoate degradation via CoA ligation; Pyrimidine metabolism; Pyruvate metabolism; Folate biosynthesis; Butanoate metabolism; Propanoate metabolism; Glyoxylate and dicarboxylate metabolism; Parkinson's disease; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Sulfur metabolism; Purine metabolism; Citrate cycle (TCA cycle); Nitrogen metabolism; Two-component system - General; Trinitrotoluene degradation; Glutamate metabolism; Methane metabolism; Ubiquinone biosynthesis; Oxidative phosphorylation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF01512; PF00037; PF13237; PF13534; PF13746; PF12838; PF13183; PF05896; PF13375; PF10531;
pfam_desc Respiratory-chain NADH dehydrogenase 51 Kd subunit; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; Na(+)-translocating NADH-quinone reductase subunit A (NQRA); RnfC Barrel sandwich hybrid domain; SLBB domain;
pfam_id Complex1_51K; Fer4; Fer4_10; Fer4_17; Fer4_18; Fer4_7; Fer4_8; NQRA; RnfC_N; SLBB;
pfam_target db:Pfam-A.hmm|PF01512.17 evalue:2.2e-50 score:169.7 best_domain_score:168.8 name:Complex1_51K; db:Pfam-A.hmm|PF00037.27 evalue:8.9e-05 score:21.4 best_domain_score:13.5 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:6.8e-09 score:35.0 best_domain_score:35.0 name:Fer4_10; db:Pfam-A.hmm|PF13534.6 evalue:2.1e-05 score:24.2 best_domain_score:19.9 name:Fer4_17; db:Pfam-A.hmm|PF13746.6 evalue:3.7e-07 score:29.6 best_domain_score:18.5 name:Fer4_18; db:Pfam-A.hmm|PF12838.7 evalue:4.2e-07 score:29.7 best_domain_score:28.3 name:Fer4_7; db:Pfam-A.hmm|PF13183.6 evalue:8.2e-07 score:28.6 best_domain_score:28.6 name:Fer4_8; db:Pfam-A.hmm|PF05896.11 evalue:0.00014 score:20.6 best_domain_score:19.6 name:NQRA; db:Pfam-A.hmm|PF13375.6 evalue:4e-27 score:93.4 best_domain_score:92.5 name:RnfC_N; db:Pfam-A.hmm|PF10531.9 evalue:1e-10 score:40.5 best_domain_score:38.9 name:SLBB;
sprot_desc Proton-translocating ferredoxin:NAD(+) oxidoreductase complex subunit C;
sprot_id sp|D8GR66|RNFC_CLOLD;
sprot_target db:uniprot_sprot|sp|D8GR66|RNFC_CLOLD 4 384 evalue:4.6e-95 qcov:87.20 identity:47.40;
tigrfam_acc TIGR01945;
tigrfam_desc electron transport complex, RnfABCDGE type, C subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name rnfC;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01945 evalue:1.7e-150 score:500.5 best_domain_score:500.3 name:TIGR01945;
65001 66101 CDS
ID metaerg.pl|05973
allec_ids 7.-.-.-;
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0022900;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191522.1 1 365 evalue:7.0e-175 qcov:99.70 identity:84.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF03116;
pfam_desc NQR2, RnfD, RnfE family;
pfam_id NQR2_RnfD_RnfE;
pfam_target db:Pfam-A.hmm|PF03116.15 evalue:5.1e-84 score:281.4 best_domain_score:281.2 name:NQR2_RnfD_RnfE;
sprot_desc Ion-translocating oxidoreductase complex subunit D;
sprot_id sp|Q9EVN4|RNFD_PSEST;
sprot_target db:uniprot_sprot|sp|Q9EVN4|RNFD_PSEST 32 346 evalue:1.1e-33 qcov:86.10 identity:34.30;
tigrfam_acc TIGR01946;
tigrfam_desc electron transport complex, RnfABCDGE type, D subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name rnfD;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01946 evalue:1.5e-70 score:237.3 best_domain_score:237.1 name:TIGR01946;
tm_num 7;
65001 66101 transmembrane_helix
ID metaerg.pl|05974
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology o65091-65159i65313-65381o65625-65693i65718-65771o65781-65840i65877-65933o65943-66002i;
66317 66748 CDS
ID metaerg.pl|05975
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265127.1 10 142 evalue:2.7e-45 qcov:93.00 identity:68.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
sp YES;
66317 66376 lipoprotein_signal_peptide
ID metaerg.pl|05976
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
67504 66791 CDS
ID metaerg.pl|05977
allgo_ids GO:0016020; GO:0016021; GO:0005886;
allko_ids K07507;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478272.1 1 237 evalue:2.5e-101 qcov:100.00 identity:79.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF02308;
pfam_desc MgtC family;
pfam_id MgtC;
pfam_target db:Pfam-A.hmm|PF02308.16 evalue:3.4e-36 score:123.5 best_domain_score:123.2 name:MgtC;
sprot_desc hypothetical protein;
sprot_id sp|P0AFV3|YHID_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFV3|YHID_ECO57 7 193 evalue:1.2e-20 qcov:78.90 identity:33.50;
tm_num 4;
67504 66791 transmembrane_helix
ID metaerg.pl|05978
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i66809-66862o66905-66973i67034-67102o67145-67213i;
67723 69048 CDS
ID metaerg.pl|05979
allec_ids 7.1.1.-;
allgo_ids GO:0006814; GO:0016655; GO:0055114; GO:0005886; GO:0051539; GO:0009055; GO:0046872;
allko_ids K00235; K00356; K00245; K05586; K00204; K00873; K11260; K00122; K00443; K03390; K03943; K00240; K00246; K00123; K05587; K00124; K00265; K00390; K08264; K05588; K00176; K03388; K00329; K00125; K03942; K00334; K00226; K00335; K00205; K00171; K00441; K03615;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191529.1 1 441 evalue:4.5e-229 qcov:100.00 identity:88.40;
kegg_pathway_id 05012; 00630; 00640; 00650; 00790; 00620; 00240; 00632; 00720; 00190; 00130; 00680; 00633; 00251; 02020; 00910; 00020; 00230; 00920; 00710; 00010;
kegg_pathway_name Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Propanoate metabolism; Butanoate metabolism; Folate biosynthesis; Pyruvate metabolism; Pyrimidine metabolism; Benzoate degradation via CoA ligation; Reductive carboxylate cycle (CO2 fixation); Oxidative phosphorylation; Ubiquinone biosynthesis; Methane metabolism; Trinitrotoluene degradation; Glutamate metabolism; Two-component system - General; Nitrogen metabolism; Citrate cycle (TCA cycle); Purine metabolism; Sulfur metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF01512; PF13237; PF05896; PF13375; PF10531;
pfam_desc Respiratory-chain NADH dehydrogenase 51 Kd subunit; 4Fe-4S dicluster domain; Na(+)-translocating NADH-quinone reductase subunit A (NQRA); RnfC Barrel sandwich hybrid domain; SLBB domain;
pfam_id Complex1_51K; Fer4_10; NQRA; RnfC_N; SLBB;
pfam_target db:Pfam-A.hmm|PF01512.17 evalue:5.5e-51 score:171.7 best_domain_score:171.1 name:Complex1_51K; db:Pfam-A.hmm|PF13237.6 evalue:5e-07 score:29.0 best_domain_score:26.4 name:Fer4_10; db:Pfam-A.hmm|PF05896.11 evalue:0.00014 score:20.6 best_domain_score:19.9 name:NQRA; db:Pfam-A.hmm|PF13375.6 evalue:8.8e-30 score:101.9 best_domain_score:98.9 name:RnfC_N; db:Pfam-A.hmm|PF10531.9 evalue:1.6e-12 score:46.3 best_domain_score:46.0 name:SLBB;
sprot_desc Proton-translocating ferredoxin:NAD(+) oxidoreductase complex subunit C;
sprot_id sp|D8GR66|RNFC_CLOLD;
sprot_target db:uniprot_sprot|sp|D8GR66|RNFC_CLOLD 9 402 evalue:1.4e-96 qcov:89.30 identity:45.30;
tigrfam_acc TIGR01945;
tigrfam_desc electron transport complex, RnfABCDGE type, C subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name rnfC;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01945 evalue:6.8e-154 score:511.7 best_domain_score:511.4 name:TIGR01945;
69050 70087 CDS
ID metaerg.pl|05980
allec_ids 7.2.1.2;
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0022900;
allko_ids K03614;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848748.1 1 345 evalue:1.0e-167 qcov:100.00 identity:84.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF03116;
pfam_desc NQR2, RnfD, RnfE family;
pfam_id NQR2_RnfD_RnfE;
pfam_target db:Pfam-A.hmm|PF03116.15 evalue:3.9e-93 score:311.3 best_domain_score:311.1 name:NQR2_RnfD_RnfE;
sprot_desc Na(+)-translocating ferredoxin:NAD(+) oxidoreductase complex subunit D;
sprot_id sp|H6LC31|RNFD_ACEWD;
sprot_target db:uniprot_sprot|sp|H6LC31|RNFD_ACEWD 11 328 evalue:2.1e-50 qcov:92.20 identity:39.10;
tigrfam_acc TIGR01946;
tigrfam_desc electron transport complex, RnfABCDGE type, D subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name rnfD;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01946 evalue:8.3e-80 score:267.7 best_domain_score:267.5 name:TIGR01946;
tm_num 3;
69050 70087 transmembrane_helix
ID metaerg.pl|05981
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i69143-69211o69326-69394i69734-69802o;
70708 70145 CDS
ID metaerg.pl|05982
allgo_ids GO:0015109; GO:0015703;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191534.1 1 187 evalue:7.6e-85 qcov:100.00 identity:86.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF02417;
pfam_desc Chromate transporter;
pfam_id Chromate_transp;
pfam_target db:Pfam-A.hmm|PF02417.15 evalue:1.2e-44 score:151.4 best_domain_score:151.1 name:Chromate_transp;
sp YES;
tm_num 5;
70145 70213 signal_peptide
ID metaerg.pl|05983
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
70708 70145 transmembrane_helix
ID metaerg.pl|05984
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i70163-70231o70373-70441i70478-70546o70574-70627i70646-70702o;
71283 70705 CDS
ID metaerg.pl|05985
allgo_ids GO:0015109; GO:0015703;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191537.1 1 192 evalue:2.6e-80 qcov:100.00 identity:83.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF02417;
pfam_desc Chromate transporter;
pfam_id Chromate_transp;
pfam_target db:Pfam-A.hmm|PF02417.15 evalue:1.7e-40 score:138.0 best_domain_score:137.8 name:Chromate_transp;
tm_num 4;
71283 70705 transmembrane_helix
ID metaerg.pl|05986
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i70741-70800o70942-71010i71029-71097o71140-71208i;
71446 72315 CDS
ID metaerg.pl|05987
allec_ids 2.4.1.58;
allgo_ids GO:0016757; GO:0008918; GO:0008919; GO:0046872; GO:0009244;
allko_ids K03279; K03276;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478280.1 1 287 evalue:1.3e-128 qcov:99.30 identity:77.70;
kegg_pathway_id 00540; 01031;
kegg_pathway_name Lipopolysaccharide biosynthesis; Glycan structures - biosynthesis 2;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id LPSSYN-PWY; LIPA-CORESYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF01501;
pfam_desc Glycosyl transferase family 8;
pfam_id Glyco_transf_8;
pfam_target db:Pfam-A.hmm|PF01501.20 evalue:2.8e-34 score:118.1 best_domain_score:117.9 name:Glyco_transf_8;
sprot_desc Lipopolysaccharide 1,2-glucosyltransferase;
sprot_id sp|P27129|RFAJ_ECOLI;
sprot_target db:uniprot_sprot|sp|P27129|RFAJ_ECOLI 2 266 evalue:5.1e-10 qcov:91.70 identity:22.90;
72312 73673 CDS
ID metaerg.pl|05988
allec_ids 1.8.1.7;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0016020; GO:0009055; GO:0071949; GO:0004362; GO:0050661; GO:0045454; GO:0006749;
allko_ids K00384; K03388; K00383; K00382; K00302;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478282.1 1 453 evalue:4.8e-218 qcov:100.00 identity:80.40;
kegg_pathway_id 00620; 00252; 00251; 00790; 00010; 00280; 00480; 00260; 00240; 00020;
kegg_pathway_name Pyruvate metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Folate biosynthesis; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation; Glutathione metabolism; Glycine, serine and threonine metabolism; Pyrimidine metabolism; Citrate cycle (TCA cycle);
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-4081; GLUT-REDOX-PWY;
metacyc_pathway_name glutathione-peroxide redox reactions;; glutathione-glutaredoxin redox reactions;;
metacyc_pathway_type Reductants;; Reductants;;
pfam_acc PF01134; PF00070; PF07992; PF13738; PF02852;
pfam_desc Glucose inhibited division protein A; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id GIDA; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF01134.22 evalue:4.8e-09 score:35.0 best_domain_score:26.0 name:GIDA; db:Pfam-A.hmm|PF00070.27 evalue:1.4e-14 score:53.7 best_domain_score:46.2 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.7e-63 score:213.8 best_domain_score:213.0 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:1e-20 score:73.4 best_domain_score:72.4 name:Pyr_redox_3; db:Pfam-A.hmm|PF02852.22 evalue:2.1e-34 score:117.3 best_domain_score:117.3 name:Pyr_redox_dim;
sprot_desc Glutathione reductase;
sprot_id sp|P06715|GSHR_ECOLI;
sprot_target db:uniprot_sprot|sp|P06715|GSHR_ECOLI 5 453 evalue:4.8e-148 qcov:99.10 identity:57.00;
tigrfam_acc TIGR01421;
tigrfam_desc glutathione-disulfide reductase;
tigrfam_mainrole Energy metabolism;
tigrfam_name gluta_reduc_1;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01421 evalue:1.6e-196 score:653.0 best_domain_score:652.9 name:TIGR01421;
74051 75514 CDS
ID metaerg.pl|05989
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0015207; GO:0015295; GO:0015853;
allko_ids K06901;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191603.1 2 487 evalue:5.7e-241 qcov:99.80 identity:91.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00860;
pfam_desc Permease family;
pfam_id Xan_ur_permease;
pfam_target db:Pfam-A.hmm|PF00860.20 evalue:7.7e-41 score:139.3 best_domain_score:129.1 name:Xan_ur_permease;
sprot_desc Adenine permease AdeP;
sprot_id sp|P31466|ADEP_ECOLI;
sprot_target db:uniprot_sprot|sp|P31466|ADEP_ECOLI 1 482 evalue:9.4e-73 qcov:99.00 identity:38.00;
tm_num 13;
74051 75514 transmembrane_helix
ID metaerg.pl|05990
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i74084-74152o74195-74263i74282-74335o74348-74407i74426-74494o74633-74701i74720-74788o74900-74968i75056-75124o75167-75235i75254-75307o75350-75418i75437-75505o;
75829 77028 CDS
ID metaerg.pl|05991
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191545.1 2 388 evalue:1.0e-115 qcov:97.00 identity:58.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF04519;
pfam_desc Polymer-forming cytoskeletal;
pfam_id Bactofilin;
pfam_target db:Pfam-A.hmm|PF04519.13 evalue:9.2e-08 score:31.5 best_domain_score:17.1 name:Bactofilin;
sp YES;
tm_num 5;
75829 75921 signal_peptide
ID metaerg.pl|05992
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
75829 77028 transmembrane_helix
ID metaerg.pl|05993
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology o75856-75924i76537-76605o76672-76740i76759-76827o76870-76938i;
78371 77151 CDS
ID metaerg.pl|05994
allec_ids 3.6.3.-;
allgo_ids GO:0016020; GO:0016021; GO:0005886; GO:0005524; GO:0016887; GO:0015562; GO:0015893; GO:0046677;
allko_ids K02004; K09808; K05685;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191548.1 1 406 evalue:2.5e-189 qcov:100.00 identity:88.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-6166; PWY-6188; PWY-6171; PWY-6135;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; ; ; ; ;
pfam_acc PF02687; PF12704;
pfam_desc FtsX-like permease family; MacB-like periplasmic core domain;
pfam_id FtsX; MacB_PCD;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:1.7e-11 score:43.6 best_domain_score:43.6 name:FtsX; db:Pfam-A.hmm|PF12704.7 evalue:2.9e-28 score:98.8 best_domain_score:98.8 name:MacB_PCD;
sprot_desc Macrolide export ATP-binding/permease protein MacB;
sprot_id sp|Q6MPX9|MACB_BDEBA;
sprot_target db:uniprot_sprot|sp|Q6MPX9|MACB_BDEBA 5 406 evalue:3.5e-33 qcov:99.00 identity:36.10;
tm_num 4;
78371 77151 transmembrane_helix
ID metaerg.pl|05995
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i77211-77279o77997-78065i78153-78221o78249-78317i;
79079 78372 CDS
ID metaerg.pl|05996
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0022857; GO:0055085;
allko_ids K02028; K11072; K02068; K02045; K09810; K06861; K02071; K01996; K02032; K02017; K11084; K02004; K02052; K02006; K02010; K05847; K01997; K02003; K02000; K10000; K02023; K02018; K09812; K10243; K05816; K10111; K10112; K01998; K02031; K02049; K01995; K02065;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191550.1 1 235 evalue:1.7e-113 qcov:100.00 identity:89.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6171; PWY-6135; PWY-6188; PWY-6166;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.1e-08 score:33.0 best_domain_score:17.0 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.4e-32 score:112.3 best_domain_score:111.6 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YknY;
sprot_id sp|O31711|YKNY_BACSU;
sprot_target db:uniprot_sprot|sp|O31711|YKNY_BACSU 1 219 evalue:4.0e-69 qcov:93.20 identity:59.40;
79961 79095 CDS
ID metaerg.pl|05997
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191552.1 1 288 evalue:1.3e-112 qcov:100.00 identity:74.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF13533; PF12700; PF13437; PF16576;
pfam_desc Biotin-lipoyl like; HlyD family secretion protein; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl_2; HlyD_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF13533.6 evalue:5e-06 score:25.5 best_domain_score:18.3 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF12700.7 evalue:2.2e-08 score:32.5 best_domain_score:16.9 name:HlyD_2; db:Pfam-A.hmm|PF13437.6 evalue:1.3e-12 score:47.6 best_domain_score:34.9 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:1.5e-10 score:39.9 best_domain_score:29.3 name:HlyD_D23;
sp YES;
tm_num 1;
79095 79169 signal_peptide
ID metaerg.pl|05998
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
79961 79095 transmembrane_helix
ID metaerg.pl|05999
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i79113-79166o;
80196 80921 CDS
ID metaerg.pl|06000
allec_ids 3.1.3.16;
allgo_ids GO:0016787; GO:0046872; GO:0004721;
allko_ids K07313; K01090;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191555.1 1 241 evalue:7.5e-109 qcov:100.00 identity:72.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:1.7e-12 score:47.5 best_domain_score:47.1 name:Metallophos;
sprot_desc Serine/threonine-protein phosphatase 1;
sprot_id sp|Q8ZNY9|PRP1_SALTY;
sprot_target db:uniprot_sprot|sp|Q8ZNY9|PRP1_SALTY 5 217 evalue:5.6e-10 qcov:88.40 identity:27.70;
80945 81766 CDS
ID metaerg.pl|06001
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191606.1 1 272 evalue:9.4e-116 qcov:99.60 identity:68.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:3.2e-17 score:63.0 best_domain_score:62.6 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:2.8e-12 score:46.4 best_domain_score:42.4 name:Metallophos_2;
tigrfam_acc TIGR03729;
tigrfam_desc putative phosphoesterase;
tigrfam_name acc_ester;
tigrfam_target db:TIGRFAMs.hmm|TIGR03729 evalue:8e-61 score:204.6 best_domain_score:204.2 name:TIGR03729;
81865 84051 CDS
ID metaerg.pl|06002
allgo_ids GO:0003676; GO:0003729; GO:0003735; GO:0006139; GO:0006412;
allko_ids K03049; K00962; K12818; K03022; K06959;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191558.1 1 726 evalue:0.0e+00 qcov:99.70 identity:85.50;
kegg_pathway_id 00240; 00230; 03020;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; RNA polymerase;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF12836; PF14635; PF17674; PF00575; PF09371; PF16921;
pfam_desc Helix-hairpin-helix motif; Helix-hairpin-helix motif ; HHH domain; S1 RNA binding domain; Tex-like protein N-terminal domain; Tex protein YqgF-like domain;
pfam_id HHH_3; HHH_7; HHH_9; S1; Tex_N; Tex_YqgF;
pfam_target db:Pfam-A.hmm|PF12836.7 evalue:1.1e-27 score:95.3 best_domain_score:93.0 name:HHH_3; db:Pfam-A.hmm|PF14635.6 evalue:2.9e-09 score:36.5 best_domain_score:34.4 name:HHH_7; db:Pfam-A.hmm|PF17674.1 evalue:6.9e-19 score:67.8 best_domain_score:65.0 name:HHH_9; db:Pfam-A.hmm|PF00575.23 evalue:9.9e-19 score:66.7 best_domain_score:65.3 name:S1; db:Pfam-A.hmm|PF09371.10 evalue:5.1e-71 score:237.3 best_domain_score:235.7 name:Tex_N; db:Pfam-A.hmm|PF16921.5 evalue:1.4e-54 score:183.1 best_domain_score:182.0 name:Tex_YqgF;
sprot_desc hypothetical protein;
sprot_id sp|O31489|YDCI_BACSU;
sprot_target db:uniprot_sprot|sp|O31489|YDCI_BACSU 21 723 evalue:2.6e-236 qcov:96.60 identity:60.30;
84088 84540 CDS
ID metaerg.pl|06003
allgo_ids GO:0005737; GO:0008270;
allko_ids K03095;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478294.1 1 146 evalue:3.9e-47 qcov:97.30 identity:60.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF10263; PF17283;
pfam_desc SprT-like family; SprT-like zinc ribbon domain;
pfam_id SprT-like; Zn_ribbon_SprT;
pfam_target db:Pfam-A.hmm|PF10263.9 evalue:6.2e-11 score:41.4 best_domain_score:41.1 name:SprT-like; db:Pfam-A.hmm|PF17283.2 evalue:2.4e-07 score:29.8 best_domain_score:28.5 name:Zn_ribbon_SprT;
sprot_desc hypothetical protein;
sprot_id sp|Q835R2|SPRTL_ENTFA;
sprot_target db:uniprot_sprot|sp|Q835R2|SPRTL_ENTFA 1 143 evalue:9.4e-40 qcov:95.30 identity:54.50;
85578 84967 CDS
ID metaerg.pl|06004
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848760.1 1 202 evalue:3.2e-68 qcov:99.50 identity:58.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF13419; PF00702;
pfam_desc Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase;
pfam_id HAD_2; Hydrolase;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:5.7e-15 score:55.1 best_domain_score:54.8 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:2.6e-07 score:30.4 best_domain_score:27.9 name:Hydrolase;
tigrfam_acc TIGR01509; TIGR01549;
tigrfam_desc HAD hydrolase, family IA, variant 3; HAD hydrolase, family IA, variant 1;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name HAD-SF-IA-v3; HAD-SF-IA-v1;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:1.2e-15 score:57.1 best_domain_score:48.2 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01549 evalue:6.4e-06 score:25.8 best_domain_score:19.4 name:TIGR01549;
85722 85805 tRNA
ID metaerg.pl|06005
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
name tRNA_Leu_gag;
85928 86287 CDS
ID metaerg.pl|06006
allgo_ids GO:0016846;
allko_ids K03396;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191566.1 1 118 evalue:8.1e-40 qcov:99.20 identity:65.30;
kegg_pathway_id 00680;
kegg_pathway_name Methane metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF04828;
pfam_desc Glutathione-dependent formaldehyde-activating enzyme;
pfam_id GFA;
pfam_target db:Pfam-A.hmm|PF04828.14 evalue:1.5e-10 score:40.5 best_domain_score:40.0 name:GFA;
87067 86321 CDS
ID metaerg.pl|06007
allgo_ids GO:0005216; GO:0006811; GO:0016020; GO:0055085; GO:0008076; GO:0042802; GO:0005249; GO:0034765;
allko_ids K02030; K10716;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium subtropicum;
genomedb_acc GCF_900112455.1;
genomedb_target db:genomedb|GCF_900112455.1|WP_091531116.1 1 244 evalue:3.9e-76 qcov:98.40 identity:63.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00520; PF07885;
pfam_desc Ion transport protein; Ion channel;
pfam_id Ion_trans; Ion_trans_2;
pfam_target db:Pfam-A.hmm|PF00520.31 evalue:5.7e-17 score:61.0 best_domain_score:60.7 name:Ion_trans; db:Pfam-A.hmm|PF07885.16 evalue:5.8e-18 score:63.9 best_domain_score:63.9 name:Ion_trans_2;
sprot_desc Voltage-gated potassium channel;
sprot_id sp|Q9YDF8|KVAP_AERPE;
sprot_target db:uniprot_sprot|sp|Q9YDF8|KVAP_AERPE 16 211 evalue:5.0e-06 qcov:79.00 identity:29.90;
tm_num 5;
87067 86321 transmembrane_helix
ID metaerg.pl|06008
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i86339-86407o86531-86599i86711-86779o86807-86875i86894-86962o;
87787 88266 CDS
ID metaerg.pl|06009
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091266931.1 1 159 evalue:3.7e-80 qcov:100.00 identity:95.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF02635; PF13686;
pfam_desc DsrE/DsrF-like family; DsrE/DsrF/DrsH-like family;
pfam_id DrsE; DrsE_2;
pfam_target db:Pfam-A.hmm|PF02635.15 evalue:6.5e-10 score:38.6 best_domain_score:19.4 name:DrsE; db:Pfam-A.hmm|PF13686.6 evalue:5.9e-58 score:194.4 best_domain_score:194.2 name:DrsE_2;
sprot_desc hypothetical protein;
sprot_id sp|P54432|YRKE_BACSU;
sprot_target db:uniprot_sprot|sp|P54432|YRKE_BACSU 1 159 evalue:7.1e-62 qcov:100.00 identity:73.10;
88318 90006 CDS
ID metaerg.pl|06010
allko_ids K01760; K01011; K01007; K04564; K01802; K02439; K01180; K01738; K01069;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191572.1 1 562 evalue:3.6e-287 qcov:100.00 identity:85.90;
kegg_pathway_id 00620; 00720; 00910; 00450; 00920; 00271; 00272;
kegg_pathway_name Pyruvate metabolism; Reductive carboxylate cycle (CO2 fixation); Nitrogen metabolism; Selenoamino acid metabolism; Sulfur metabolism; Methionine metabolism; Cysteine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00753; PF00581; PF01206;
pfam_desc Metallo-beta-lactamase superfamily; Rhodanese-like domain; Sulfurtransferase TusA;
pfam_id Lactamase_B; Rhodanese; TusA;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:1.1e-12 score:47.6 best_domain_score:46.9 name:Lactamase_B; db:Pfam-A.hmm|PF00581.20 evalue:3.8e-27 score:94.2 best_domain_score:60.9 name:Rhodanese; db:Pfam-A.hmm|PF01206.17 evalue:1.3e-19 score:69.0 best_domain_score:66.1 name:TusA;
90055 90282 CDS
ID metaerg.pl|06011
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191575.1 1 75 evalue:7.9e-33 qcov:100.00 identity:93.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF01206;
pfam_desc Sulfurtransferase TusA;
pfam_id TusA;
pfam_target db:Pfam-A.hmm|PF01206.17 evalue:3.6e-24 score:83.6 best_domain_score:83.5 name:TusA;
sprot_desc Putative sulfur carrier protein YrkI;
sprot_id sp|P54436|YRKI_BACSU;
sprot_target db:uniprot_sprot|sp|P54436|YRKI_BACSU 1 75 evalue:2.9e-21 qcov:100.00 identity:62.70;
90349 91131 CDS
ID metaerg.pl|06012
allgo_ids GO:0016021; GO:0005886;
allko_ids K07090;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091266940.1 1 259 evalue:2.8e-125 qcov:99.60 identity:94.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF01925;
pfam_desc Sulfite exporter TauE/SafE;
pfam_id TauE;
pfam_target db:Pfam-A.hmm|PF01925.19 evalue:1.9e-38 score:131.6 best_domain_score:131.4 name:TauE;
sprot_desc Probable membrane transporter protein YrkJ;
sprot_id sp|P54437|YRKJ_BACSU;
sprot_target db:uniprot_sprot|sp|P54437|YRKJ_BACSU 1 258 evalue:2.2e-73 qcov:99.20 identity:54.80;
tm_num 8;
90349 91131 transmembrane_helix
ID metaerg.pl|06013
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i90361-90429o90487-90555i90589-90657o90670-90723i90784-90852o90880-90948i90967-91029o91057-91125i;
91642 91271 CDS
ID metaerg.pl|06014
allgo_ids GO:0005737; GO:0046872; GO:0006811; GO:0055072;
allko_ids K05937;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106191580.1 1 123 evalue:1.5e-49 qcov:100.00 identity:73.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF08818;
pfam_desc Domain of unknown function (DU1801);
pfam_id DUF1801;
pfam_target db:Pfam-A.hmm|PF08818.11 evalue:4.3e-14 score:52.0 best_domain_score:51.8 name:DUF1801;
sprot_desc Intracellular iron chaperone frataxin;
sprot_id sp|Q797E6|FRA_BACSU;
sprot_target db:uniprot_sprot|sp|Q797E6|FRA_BACSU 4 123 evalue:3.7e-34 qcov:97.60 identity:51.70;
91817 92245 CDS
ID metaerg.pl|06015
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106194265.1 1 142 evalue:4.2e-59 qcov:100.00 identity:81.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF13412; PF01047; PF12802;
pfam_desc Winged helix-turn-helix DNA-binding; MarR family; MarR family;
pfam_id HTH_24; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF13412.6 evalue:7.8e-08 score:31.0 best_domain_score:29.9 name:HTH_24; db:Pfam-A.hmm|PF01047.22 evalue:2.4e-10 score:39.4 best_domain_score:37.7 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:1.2e-09 score:37.2 best_domain_score:36.5 name:MarR_2;
92267 93982 CDS
ID metaerg.pl|06016
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887;
allko_ids K02023; K02000; K10111; K02049; K01995; K02071; K06861; K01996; K02045; K02006; K02052; K02010; K05847; K02017; K06147;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106194262.1 1 571 evalue:2.1e-271 qcov:100.00 identity:85.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:1.3e-40 score:139.0 best_domain_score:138.7 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:6.7e-32 score:110.1 best_domain_score:109.4 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YfiB;
sprot_id sp|P54718|YFIB_BACSU;
sprot_target db:uniprot_sprot|sp|P54718|YFIB_BACSU 1 568 evalue:1.9e-80 qcov:99.50 identity:32.80;
tm_num 6;
92267 93982 transmembrane_helix
ID metaerg.pl|06017
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i92312-92380o92423-92479i92663-92716o92726-92785i92987-93055o93083-93151i;
93975 95774 CDS
ID metaerg.pl|06018
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887;
allko_ids K02000; K01995; K02045; K02071; K06861; K01996; K02052; K02006; K06147;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478305.1 3 599 evalue:8.2e-306 qcov:99.70 identity:91.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:1.6e-51 score:174.8 best_domain_score:174.2 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:1.2e-31 score:109.3 best_domain_score:108.2 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YfiC;
sprot_id sp|P54719|YFIC_BACSU;
sprot_target db:uniprot_sprot|sp|P54719|YFIC_BACSU 7 596 evalue:2.1e-127 qcov:98.50 identity:42.50;
tm_num 4;
93975 95774 transmembrane_helix
ID metaerg.pl|06019
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology i94083-94151o94194-94262i94476-94544o94821-94889i;
96786 95872 CDS
ID metaerg.pl|06020
allgo_ids GO:0016021; GO:0055085;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106194256.1 1 304 evalue:1.7e-137 qcov:100.00 identity:85.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF03547; PF01758;
pfam_desc Membrane transport protein; Sodium Bile acid symporter family;
pfam_id Mem_trans; SBF;
pfam_target db:Pfam-A.hmm|PF03547.18 evalue:3.6e-25 score:87.4 best_domain_score:48.5 name:Mem_trans; db:Pfam-A.hmm|PF01758.16 evalue:8.6e-06 score:24.8 best_domain_score:24.8 name:SBF;
tm_num 10;
96786 95872 transmembrane_helix
ID metaerg.pl|06021
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
topology o95887-95946i95983-96039o96067-96126i96163-96222o96235-96303i96337-96405o96433-96489i96526-96594o96607-96675i96712-96780o;
96913 97296 CDS
ID metaerg.pl|06022
allgo_ids GO:0046872;
allko_ids K00457; K01759; K08234;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091487199.1 4 126 evalue:9.6e-47 qcov:96.90 identity:73.20;
kegg_pathway_id 00350; 00360; 00620; 04011;
kegg_pathway_name Tyrosine metabolism; Phenylalanine metabolism; Pyruvate metabolism; MAPK signaling pathway - yeast;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00903; PF13468; PF13669; PF18029;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase-like domain; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase-like domain;
pfam_id Glyoxalase; Glyoxalase_3; Glyoxalase_4; Glyoxalase_6;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:1.7e-21 score:76.0 best_domain_score:75.8 name:Glyoxalase; db:Pfam-A.hmm|PF13468.6 evalue:5.7e-07 score:29.0 best_domain_score:28.8 name:Glyoxalase_3; db:Pfam-A.hmm|PF13669.6 evalue:4.9e-13 score:48.5 best_domain_score:48.3 name:Glyoxalase_4; db:Pfam-A.hmm|PF18029.1 evalue:3.6e-08 score:33.4 best_domain_score:33.1 name:Glyoxalase_6;
sprot_desc hypothetical protein;
sprot_id sp|P45871|YWKD_BACSU;
sprot_target db:uniprot_sprot|sp|P45871|YWKD_BACSU 1 127 evalue:2.3e-39 qcov:100.00 identity:64.80;
97571 97957 CDS
ID metaerg.pl|06023
allec_ids 4.4.1.5;
allgo_ids GO:0004462; GO:0046872;
allko_ids K01759;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478310.1 1 128 evalue:4.3e-63 qcov:100.00 identity:92.20;
kegg_pathway_id 04011; 00620;
kegg_pathway_name MAPK signaling pathway - yeast; Pyruvate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
metacyc_pathway_id METHGLYUT-PWY; PWY-5386;
metacyc_pathway_name superpathway of methylglyoxal degradation;; methylglyoxal degradation I;;
metacyc_pathway_type Aldehyde-Degradation; Super-Pathways;; Methylglyoxal-Detoxification;;
pfam_acc PF00903; PF13669;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase; Glyoxalase_4;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:9e-17 score:60.7 best_domain_score:60.5 name:Glyoxalase; db:Pfam-A.hmm|PF13669.6 evalue:8.9e-12 score:44.5 best_domain_score:44.1 name:Glyoxalase_4;
sprot_desc Lactoylglutathione lyase;
sprot_id sp|P0A0T2|LGUL_NEIMA;
sprot_target db:uniprot_sprot|sp|P0A0T2|LGUL_NEIMA 4 127 evalue:1.6e-24 qcov:96.90 identity:49.20;
tigrfam_acc TIGR00068;
tigrfam_desc lactoylglutathione lyase;
tigrfam_mainrole Energy metabolism;
tigrfam_name glyox_I;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00068 evalue:2.9e-39 score:133.1 best_domain_score:132.9 name:TIGR00068;
98020 99633 CDS
ID metaerg.pl|06024
allec_ids 3.4.19.13;
allgo_ids GO:0005576; GO:0036374; GO:0102953; GO:0103068; GO:0006750; GO:0006751;
allko_ids K00681;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106194246.1 1 537 evalue:5.9e-239 qcov:100.00 identity:74.50;
kegg_pathway_id 00480; 00450; 00590; 00460; 00430;
kegg_pathway_name Glutathione metabolism; Selenoamino acid metabolism; Arachidonic acid metabolism; Cyanoamino acid metabolism; Taurine and hypotaurine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF01019;
pfam_desc Gamma-glutamyltranspeptidase;
pfam_id G_glu_transpept;
pfam_target db:Pfam-A.hmm|PF01019.21 evalue:3.9e-142 score:473.9 best_domain_score:473.7 name:G_glu_transpept;
sprot_desc Glutathione hydrolase proenzyme;
sprot_id sp|P54422|GGT_BACSU;
sprot_target db:uniprot_sprot|sp|P54422|GGT_BACSU 13 522 evalue:3.7e-54 qcov:95.00 identity:29.00;
99658 100542 CDS
ID metaerg.pl|06025
allec_ids 2.7.1.85;
allgo_ids GO:0005524; GO:0047700; GO:0005975;
allko_ids K00845;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478313.1 1 291 evalue:4.8e-118 qcov:99.00 identity:71.10;
kegg_pathway_id 00500; 00521; 00052; 00010;
kegg_pathway_name Starch and sucrose metabolism; Streptomycin biosynthesis; Galactose metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00480;
pfam_desc ROK family;
pfam_id ROK;
pfam_target db:Pfam-A.hmm|PF00480.20 evalue:7.7e-46 score:156.1 best_domain_score:155.1 name:ROK;
sprot_desc Beta-glucoside kinase;
sprot_id sp|Q93LQ8|BGLK_KLEPN;
sprot_target db:uniprot_sprot|sp|Q93LQ8|BGLK_KLEPN 1 289 evalue:7.0e-39 qcov:98.30 identity:35.50;
100564 101211 CDS
ID metaerg.pl|06026
allec_ids 3.1.1.72;
allgo_ids GO:0016788; GO:0005737; GO:0046555; GO:0045493;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091487190.1 1 213 evalue:1.7e-96 qcov:99.10 identity:77.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0361527; 2.466; 47.1903; ; 49.6925;
pfam_acc PF00657; PF13472;
pfam_desc GDSL-like Lipase/Acylhydrolase; GDSL-like Lipase/Acylhydrolase family;
pfam_id Lipase_GDSL; Lipase_GDSL_2;
pfam_target db:Pfam-A.hmm|PF00657.22 evalue:9.8e-12 score:44.5 best_domain_score:44.2 name:Lipase_GDSL; db:Pfam-A.hmm|PF13472.6 evalue:2.1e-26 score:92.7 best_domain_score:92.5 name:Lipase_GDSL_2;
sprot_desc Acetylxylan esterase;
sprot_id sp|Q09LX1|AXE2_GEOSE;
sprot_target db:uniprot_sprot|sp|Q09LX1|AXE2_GEOSE 1 209 evalue:2.0e-27 qcov:97.20 identity:31.80;
>Feature NODE_37_length_100867_cov_7.84447
320 1390 CDS
ID metaerg.pl|06027
allec_ids 1.1.1.169; 1.1.1.-;
allgo_ids GO:0005737; GO:0008677; GO:0015940;
allko_ids K00077;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Ga0077555;s__Ga0077555 sp001464655;
genomedb_acc GCA_001464655.1;
genomedb_target db:genomedb|GCA_001464655.1|LNFG01000149.1_2 8 354 evalue:3.8e-133 qcov:97.50 identity:67.70;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY-6419; SUCROSEUTIL2-PWY; PWY-1186; PWY1A0-6325; PWY-6516; PWY-321; CENTBENZCOA-PWY; 4TOLCARBDEG-PWY; LYSDEGII-PWY; PWY-6577; TOLSULFDEG-PWY; ECASYN-PWY; PWY-5048; PWY-5789; PWY-481; PWY-882; PWY-5327; PWY-5195; PWY-5466; PWY-4221; PWY-5972; PANTO-PWY; PWY-6575; PWY-6501; PANTOSYN-PWY; PWY-5197; PWY-5184; BENZCOA-PWY; P302-PWY; PWY-5392; PWY-5516;
metacyc_pathway_name shikimate degradation II;; sucrose degradation VII (sucrose 3-dehydrogenase);; L-homomethionine biosynthesis;; actinorhodin biosynthesis;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; cutin biosynthesis;; benzoyl-CoA degradation II (anaerobic);; 4-toluenecarboxylate degradation;; L-lysine degradation III;; farnesylcysteine salvage pathway;; 4-toluenesulfonate degradation I;; enterobacterial common antigen biosynthesis;; rosmarinic acid biosynthesis I;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; ethylbenzene degradation (anaerobic);; L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of L-lysine degradation;; artemisinin and arteannuin B biosynthesis;; matairesinol biosynthesis;; superpathway of coenzyme A biosynthesis II (plants);; stearate biosynthesis I (animals and fungi);; phosphopantothenate biosynthesis I;; juvenile hormone III biosynthesis I;; D-glucuronate degradation II;; superpathway of coenzyme A biosynthesis I (bacteria);; lactate biosynthesis (archaea);; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; L-sorbose degradation;; reductive TCA cycle II;; D-xylose degradation II;;
metacyc_pathway_type Shikimate-Degradation;; SUCROSE-DEG;; Other-Amino-Acid-Biosynthesis;; Antibiotic-Biosynthesis;; Sugar-Derivatives; Super-Pathways;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; Benzoyl-CoA-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; LYSINE-DEG;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; 4-Toluenesulfonate-Degradation;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Rosmarinate-Biosynthesis;; Autotrophic-CO2-Fixation;; AROMATIC-COMPOUNDS-DEGRADATION;; Ascorbate-Biosynthesis;; LYSINE-DEG; Super-Pathways;; SESQUITERPENE-LACTONE;; LIGNAN-SYN;; CoA-Biosynthesis; Super-Pathways;; Stearate-Biosynthesis;; Pantothenate-Biosynthesis;; HORMONE-SYN; JH-III-Biosynthesis;; D-Glucuronate-Degradation;; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; Energy-Metabolism;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Sugars-And-Polysaccharides-Degradation;; Reductive-TCA-Cycles;; Xylose-Degradation;;
pfam_acc PF02558; PF08546;
pfam_desc Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal;
pfam_id ApbA; ApbA_C;
pfam_target db:Pfam-A.hmm|PF02558.16 evalue:4.4e-26 score:90.6 best_domain_score:90.0 name:ApbA; db:Pfam-A.hmm|PF08546.11 evalue:4.6e-25 score:87.5 best_domain_score:82.7 name:ApbA_C;
sprot_desc Putative 2-dehydropantoate 2-reductase;
sprot_id sp|O28578|PANE_ARCFU;
sprot_target db:uniprot_sprot|sp|O28578|PANE_ARCFU 8 342 evalue:7.2e-22 qcov:94.10 identity:26.70;
tigrfam_acc TIGR00745;
tigrfam_desc 2-dehydropantoate 2-reductase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name apbA_panE;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00745 evalue:5.4e-51 score:172.8 best_domain_score:172.5 name:TIGR00745;
1472 3004 CDS
ID metaerg.pl|06028
allgo_ids GO:0046872; GO:0008237; GO:0008233; GO:0008270; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__AKCV01;s__AKCV01 sp000272025;
genomedb_acc GCF_000272025.1;
genomedb_target db:genomedb|GCF_000272025.1|WP_009523830.1 1 498 evalue:2.4e-157 qcov:97.60 identity:59.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF07364; PF07171;
pfam_desc Metallopeptidase family M81; MlrC C-terminus;
pfam_id DUF1485; MlrC_C;
pfam_target db:Pfam-A.hmm|PF07364.12 evalue:1.5e-79 score:266.5 best_domain_score:266.2 name:DUF1485; db:Pfam-A.hmm|PF07171.12 evalue:2.1e-58 score:196.7 best_domain_score:195.6 name:MlrC_C;
sprot_desc Microcystinase C;
sprot_id sp|Q93CA6|MLRC_SPHSX;
sprot_target db:uniprot_sprot|sp|Q93CA6|MLRC_SPHSX 1 492 evalue:4.4e-49 qcov:96.50 identity:32.10;
3109 4677 CDS
ID metaerg.pl|06029
allko_ids K02035;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__Pseudohongiella;s__Pseudohongiella sp002711845;
genomedb_acc GCA_002711845.1;
genomedb_target db:genomedb|GCA_002711845.1|MBC54702.1 5 518 evalue:4.3e-186 qcov:98.50 identity:61.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:3.2e-64 score:216.5 best_domain_score:216.1 name:SBP_bac_5;
4679 5623 CDS
ID metaerg.pl|06030
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K02033; K13890;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__Pseudohongiella;s__Pseudohongiella sp002422225;
genomedb_acc GCA_002422225.1;
genomedb_target db:genomedb|GCA_002422225.1|DITX01000124.1_34 1 312 evalue:2.9e-113 qcov:99.40 identity:71.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.7e-33 score:113.7 best_domain_score:113.7 name:BPD_transp_1;
sprot_desc Putative peptide transport system permease protein BruAb2_1031;
sprot_id sp|Q8VQK4|Y1031_BRUAB;
sprot_target db:uniprot_sprot|sp|Q8VQK4|Y1031_BRUAB 3 312 evalue:4.8e-62 qcov:98.70 identity:41.90;
tm_num 6;
4679 5623 transmembrane_helix
ID metaerg.pl|06031
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i4697-4765o4976-5044i5081-5149o5207-5275i5378-5446o5528-5596i;
5613 6434 CDS
ID metaerg.pl|06032
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K02034; K13891;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__Pseudohongiella;s__Pseudohongiella acticola;
genomedb_acc GCF_001758195.1;
genomedb_target db:genomedb|GCF_001758195.1|WP_070115984.1 3 273 evalue:1.2e-99 qcov:99.30 identity:71.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:7.5e-24 score:83.7 best_domain_score:83.7 name:BPD_transp_1;
sp YES;
sprot_desc Glutathione transport system permease protein GsiD;
sprot_id sp|Q6D3B2|GSID_PECAS;
sprot_target db:uniprot_sprot|sp|Q6D3B2|GSID_PECAS 17 269 evalue:4.1e-41 qcov:92.70 identity:38.20;
tm_num 6;
5613 5693 signal_peptide
ID metaerg.pl|06033
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
5613 6434 transmembrane_helix
ID metaerg.pl|06034
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i5631-5699o5826-5894i5928-5996o6009-6068i6159-6227o6321-6389i;
6431 7537 CDS
ID metaerg.pl|06035
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015031;
allko_ids K02031; K10111; K02049; K02032; K02034; K13896; K12371; K02052; K02006; K02010; K02045; K06861; K02071; K01996;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus saxobsidens_A;
genomedb_acc GCF_000284015.1;
genomedb_target db:genomedb|GCF_000284015.1|WP_014376588.1 5 360 evalue:3.9e-117 qcov:96.70 identity:62.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY-6135; PWY-6171; PWY-6166; PWY-6188; PWYG-321; PWY-6113;
metacyc_pathway_name ; ; ; ; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF13304; PF00005; PF08352;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id AAA_21; ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:4.1e-07 score:29.3 best_domain_score:24.0 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:5.5e-26 score:91.0 best_domain_score:90.5 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:1.4e-21 score:76.0 best_domain_score:75.2 name:oligo_HPY;
sprot_desc Putative peptide import ATP-binding protein BMEII0863;
sprot_id sp|Q8YBN6|Y3863_BRUME;
sprot_target db:uniprot_sprot|sp|Q8YBN6|Y3863_BRUME 5 306 evalue:1.6e-80 qcov:82.10 identity:50.60;
tigrfam_acc TIGR01727;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name oligo_HPY;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:3.8e-24 score:83.8 best_domain_score:83.0 name:TIGR01727;
7534 8580 CDS
ID metaerg.pl|06036
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016887; GO:0015833;
allko_ids K02023; K02000; K01995; K02049; K02031; K10111; K05816; K01996; K02071; K06861; K11072; K02045; K02068; K05847; K02010; K02052; K02006; K13896; K02017; K02032;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus saxobsidens_A;
genomedb_acc GCF_000284015.1;
genomedb_target db:genomedb|GCF_000284015.1|WP_014376587.1 15 332 evalue:9.7e-126 qcov:91.40 identity:69.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-6188; PWY-6166; PWY-6135; PWY-6171;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; ; ; ; ;
pfam_acc PF00005; PF08352;
pfam_desc ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:5.9e-29 score:100.6 best_domain_score:100.2 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:6.5e-17 score:61.0 best_domain_score:60.2 name:oligo_HPY;
sprot_desc Putative oligopeptide transport ATP-binding protein YkfD;
sprot_id sp|C0SP98|YKFD_BACSU;
sprot_target db:uniprot_sprot|sp|C0SP98|YKFD_BACSU 22 329 evalue:3.8e-84 qcov:88.50 identity:52.70;
tigrfam_acc TIGR01727;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name oligo_HPY;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:4.3e-26 score:90.0 best_domain_score:89.4 name:TIGR01727;
8580 9440 CDS
ID metaerg.pl|06037
allec_ids 4.1.1.112;
allgo_ids GO:0000287; GO:0008948; GO:0006107; GO:0042866;
allko_ids K01003;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Ga0077555;s__Ga0077555 sp001464655;
genomedb_acc GCA_001464655.1;
genomedb_target db:genomedb|GCA_001464655.1|LNFG01000149.1_1 2 286 evalue:7.8e-97 qcov:99.70 identity:63.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF13714;
pfam_desc Phosphoenolpyruvate phosphomutase;
pfam_id PEP_mutase;
pfam_target db:Pfam-A.hmm|PF13714.6 evalue:4.4e-44 score:150.0 best_domain_score:149.8 name:PEP_mutase;
sprot_desc Oxaloacetate decarboxylase;
sprot_id sp|A4YT21|OADC_BRASO;
sprot_target db:uniprot_sprot|sp|A4YT21|OADC_BRASO 7 286 evalue:3.3e-78 qcov:97.90 identity:52.50;
10329 9457 CDS
ID metaerg.pl|06038
allec_ids 1.14.11.44;
allgo_ids GO:0016491; GO:0055114; GO:0051213; GO:0031418; GO:0046872;
allko_ids K21729;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Paracraurococcus;s__Paracraurococcus sp003258945;
genomedb_acc GCF_003258945.1;
genomedb_target db:genomedb|GCF_003258945.1|WP_111470742.1 1 289 evalue:9.6e-119 qcov:99.70 identity:66.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF02668;
pfam_desc Taurine catabolism dioxygenase TauD, TfdA family;
pfam_id TauD;
pfam_target db:Pfam-A.hmm|PF02668.16 evalue:1.8e-62 score:210.8 best_domain_score:210.6 name:TauD;
sprot_desc (R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase;
sprot_id sp|P83310|RDPA_DELAC;
sprot_target db:uniprot_sprot|sp|P83310|RDPA_DELAC 6 289 evalue:8.1e-56 qcov:97.90 identity:37.30;
10684 13038 CDS
ID metaerg.pl|06039
allgo_ids GO:0009279; GO:0016021; GO:0005506; GO:0038023; GO:0015675; GO:0015891; GO:0006829;
allko_ids K02014;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA9659;s__UBA9659 sp002694945;
genomedb_acc GCA_002694945.1;
genomedb_target db:genomedb|GCA_002694945.1|MAM81663.1 50 782 evalue:1.9e-198 qcov:93.50 identity:49.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF07715; PF00593;
pfam_desc TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:2.6e-16 score:59.3 best_domain_score:58.3 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:2.5e-47 score:162.1 best_domain_score:161.7 name:TonB_dep_Rec;
sp YES;
sprot_desc Metal-pseudopaline receptor CntO;
sprot_id sp|A0A0H2ZI93|CNTO_PSEAB;
sprot_target db:uniprot_sprot|sp|A0A0H2ZI93|CNTO_PSEAB 145 734 evalue:1.8e-17 qcov:75.30 identity:23.70;
10684 10800 signal_peptide
ID metaerg.pl|06040
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
13439 14986 CDS
ID metaerg.pl|06041
allec_ids 2.2.1.6;
allgo_ids GO:0003824; GO:0030976; GO:0005618; GO:0005576; GO:0005886; GO:0003984; GO:0046872; GO:0009097; GO:0009099;
allko_ids K01652; K01576;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA4421;s__UBA4421 sp002470275;
genomedb_acc GCA_002470275.1;
genomedb_target db:genomedb|GCA_002470275.1|DKNY01000035.1_47 2 515 evalue:2.6e-183 qcov:99.80 identity:64.30;
kegg_pathway_id 00770; 00650; 00660; 00290; 00622; 00362;
kegg_pathway_name Pantothenate and CoA biosynthesis; Butanoate metabolism; C5-Branched dibasic acid metabolism; Valine, leucine and isoleucine biosynthesis; Toluene and xylene degradation; Benzoate degradation via hydroxylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY-6396; PWY-5103; BRANCHED-CHAIN-AA-SYN-PWY; PWY-6389; PWY-5104; PWY-5939; ILEUSYN-PWY; VALSYN-PWY; PWY-5101; PWY-3001; PWY-5938; THREOCAT-PWY;
metacyc_pathway_name superpathway of 2,3-butanediol biosynthesis;; L-isoleucine biosynthesis III;; superpathway of branched chain amino acid biosynthesis;; pyruvate fermentation to (S)-acetoin;; L-isoleucine biosynthesis IV;; pyruvate fermentation to (R)-acetoin II;; L-isoleucine biosynthesis I (from threonine);; L-valine biosynthesis;; L-isoleucine biosynthesis II;; superpathway of L-isoleucine biosynthesis I;; pyruvate fermentation to (R)-acetoin I;; superpathway of L-threonine metabolism;;
metacyc_pathway_type Butanediol-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; Acetoin-Biosynthesis;; Super-Pathways; THREONINE-DEG;;
pfam_acc PF02775; PF02776;
pfam_desc Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain;
pfam_id TPP_enzyme_C; TPP_enzyme_N;
pfam_target db:Pfam-A.hmm|PF02775.21 evalue:2.7e-25 score:88.2 best_domain_score:84.9 name:TPP_enzyme_C; db:Pfam-A.hmm|PF02776.18 evalue:2.1e-39 score:134.1 best_domain_score:131.3 name:TPP_enzyme_N;
sprot_desc Putative acetolactate synthase large subunit IlvX;
sprot_id sp|O53554|ILVX_MYCTU;
sprot_target db:uniprot_sprot|sp|O53554|ILVX_MYCTU 1 515 evalue:1.1e-148 qcov:100.00 identity:57.00;
16252 15143 CDS
ID metaerg.pl|06042
allec_ids 2.6.1.9;
allgo_ids GO:0009058; GO:0030170; GO:0004400; GO:0000105;
allko_ids K00817; K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Woeseiales;f__Woeseiaceae;g__GCA-002728725;s__GCA-002728725 sp002728725;
genomedb_acc GCA_002728725.1;
genomedb_target db:genomedb|GCA_002728725.1|MBR78038.1 5 369 evalue:2.6e-100 qcov:98.90 identity:50.10;
kegg_pathway_id 00400; 00401; 00350; 00340; 00360; 00300; 00310;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Novobiocin biosynthesis; Tyrosine metabolism; Histidine metabolism; Phenylalanine metabolism; Lysine biosynthesis; Lysine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id HISTSYN-PWY; PRPP-PWY;
metacyc_pathway_name L-histidine biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type HISTIDINE-SYN;; Super-Pathways;;
pfam_acc PF00155; PF00266; PF01053;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Cys/Met metabolism PLP-dependent enzyme;
pfam_id Aminotran_1_2; Aminotran_5; Cys_Met_Meta_PP;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1.7e-45 score:155.0 best_domain_score:154.8 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:7.8e-08 score:30.9 best_domain_score:30.2 name:Aminotran_5; db:Pfam-A.hmm|PF01053.20 evalue:2.8e-06 score:25.4 best_domain_score:24.8 name:Cys_Met_Meta_PP;
sp YES;
sprot_desc Histidinol-phosphate aminotransferase;
sprot_id sp|Q2RL44|HIS8_MOOTA;
sprot_target db:uniprot_sprot|sp|Q2RL44|HIS8_MOOTA 41 366 evalue:8.7e-47 qcov:88.30 identity:36.10;
15143 15244 signal_peptide
ID metaerg.pl|06043
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
16650 16309 CDS
ID metaerg.pl|06044
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylomonadaceae;g__WM-3-3;s__WM-3-3 sp002928495;
genomedb_acc GCA_002928495.1;
genomedb_target db:genomedb|GCA_002928495.1|PPC89160.1 26 109 evalue:1.7e-07 qcov:74.30 identity:39.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF11006;
pfam_desc Protein of unknown function (DUF2845);
pfam_id DUF2845;
pfam_target db:Pfam-A.hmm|PF11006.8 evalue:2.5e-19 score:68.4 best_domain_score:68.0 name:DUF2845;
sp YES;
16309 16374 signal_peptide
ID metaerg.pl|06045
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
16866 19031 CDS
ID metaerg.pl|06046
allec_ids 3.2.1.-;
allgo_ids GO:0003824; GO:0005975; GO:0004133; GO:0004553; GO:0005980;
allko_ids K01176; K01236; K00700; K01200;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D;s__Pseudomonas_D xinjiangensis;
genomedb_acc GCF_900104945.1;
genomedb_target db:genomedb|GCF_900104945.1|WP_093394638.1 1 719 evalue:0.0e+00 qcov:99.70 identity:76.50;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY-5825; PWY-5821; SUCROSEUTIL2-PWY; PWY-862; PWY-5976;
metacyc_pathway_name dalpatein and dalnigrein biosynthesis;; dalcochinin biosynthesis;; sucrose degradation VII (sucrose 3-dehydrogenase);; fructan degradation;; dhurrin degradation;;
metacyc_pathway_type ISOFLAVONOID-SYN;; ISOFLAVONOID-SYN;; SUCROSE-DEG;; Glycan-Pathways; POLYSACCHARIDES-DEG;; CYANOGENIC-GLUCOSIDE-DEG;;
pfam_acc PF00128; PF02922;
pfam_desc Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain);
pfam_id Alpha-amylase; CBM_48;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:2.7e-14 score:52.7 best_domain_score:31.4 name:Alpha-amylase; db:Pfam-A.hmm|PF02922.18 evalue:1.2e-19 score:69.6 best_domain_score:68.6 name:CBM_48;
sprot_desc Glycogen operon protein GlgX homolog;
sprot_id sp|P0A4Y5|GLGX_MYCBO;
sprot_target db:uniprot_sprot|sp|P0A4Y5|GLGX_MYCBO 23 715 evalue:7.3e-207 qcov:96.10 identity:50.90;
tigrfam_acc TIGR02100;
tigrfam_desc glycogen debranching enzyme GlgX;
tigrfam_mainrole Energy metabolism;
tigrfam_name glgX_debranch;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02100 evalue:0 score:1060.3 best_domain_score:1060.1 name:TIGR02100;
19112 20542 CDS
ID metaerg.pl|06047
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Dokdonella;s__Dokdonella immobilis;
genomedb_acc GCF_900115085.1;
genomedb_target db:genomedb|GCF_900115085.1|WP_092406544.1 6 469 evalue:6.5e-189 qcov:97.50 identity:68.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:7.2e-12 score:44.4 best_domain_score:43.8 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:5.5e-21 score:74.5 best_domain_score:73.9 name:Peptidase_M20;
20582 21817 CDS
ID metaerg.pl|06048
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005886; GO:0003995; GO:0050660; GO:0052890;
allko_ids K11731; K00249; K14448; K06446; K00253; K00248; K11410; K09478; K00120; K00232; K00252;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR30111.1 1 411 evalue:8.0e-220 qcov:100.00 identity:91.00;
kegg_pathway_id 00380; 00930; 00632; 00361; 00626; 00280; 00624; 00310; 00592; 00410; 00071; 00650; 00640; 00903; 01040;
kegg_pathway_name Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation; gamma-Hexachlorocyclohexane degradation; Naphthalene and anthracene degradation; Valine, leucine and isoleucine degradation; 1- and 2-Methylnaphthalene degradation; Lysine degradation; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Butanoate metabolism; Propanoate metabolism; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY-699; PWY-6544; PWY-2582; CARNMET-PWY;
metacyc_pathway_name brassinosteroid biosynthesis I;; superpathway of C28 brassinosteroid biosynthesis;; brassinosteroid biosynthesis II;; L-carnitine degradation I;;
metacyc_pathway_type Brassinosteroid-Biosynthesis;; Super-Pathways;; Brassinosteroid-Biosynthesis;; CARN-DEG;;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:1.7e-34 score:118.4 best_domain_score:118.4 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:2.2e-14 score:53.1 best_domain_score:52.0 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:1.7e-20 score:72.3 best_domain_score:70.5 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:3.9e-20 score:71.8 best_domain_score:71.0 name:Acyl-CoA_dh_N;
sprot_desc Probable acyl-CoA dehydrogenase YngJ;
sprot_id sp|O34421|ACDC_BACSU;
sprot_target db:uniprot_sprot|sp|O34421|ACDC_BACSU 3 394 evalue:1.4e-40 qcov:95.40 identity:29.60;
22721 21909 CDS
ID metaerg.pl|06049
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Caballeronia;s__Caballeronia terrestris;
genomedb_acc GCF_001544515.1;
genomedb_target db:genomedb|GCF_001544515.1|WP_087655505.1 5 270 evalue:5.7e-65 qcov:98.50 identity:52.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF09851;
pfam_desc Short C-terminal domain;
pfam_id SHOCT;
pfam_target db:Pfam-A.hmm|PF09851.9 evalue:3.9e-10 score:38.4 best_domain_score:37.7 name:SHOCT;
22993 22727 CDS
ID metaerg.pl|06050
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Rhodanobacter;s__Rhodanobacter sp900142825;
genomedb_acc GCF_900142825.1;
genomedb_target db:genomedb|GCF_900142825.1|WP_072759544.1 1 84 evalue:1.9e-33 qcov:95.50 identity:82.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF07883;
pfam_desc Cupin domain;
pfam_id Cupin_2;
pfam_target db:Pfam-A.hmm|PF07883.11 evalue:2.8e-09 score:35.8 best_domain_score:34.9 name:Cupin_2;
24279 23224 CDS
ID metaerg.pl|06051
allec_ids 4.1.99.12; 3.5.4.25;
allgo_ids GO:0008686; GO:0009231; GO:0005525; GO:0003935; GO:0000287; GO:0030145; GO:0008270;
allko_ids K14652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003228415;
genomedb_acc GCA_003228415.1;
genomedb_target db:genomedb|GCA_003228415.1|QIDL01000419.1_4 3 351 evalue:3.2e-124 qcov:99.40 identity:64.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY-6168; PWY-6167; RIBOSYN2-PWY;
metacyc_pathway_name flavin biosynthesis III (fungi);; flavin biosynthesis II (archaea);; flavin biosynthesis I (bacteria and plants);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00926; PF00925;
pfam_desc 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II;
pfam_id DHBP_synthase; GTP_cyclohydro2;
pfam_target db:Pfam-A.hmm|PF00926.19 evalue:7.2e-83 score:276.1 best_domain_score:275.7 name:DHBP_synthase; db:Pfam-A.hmm|PF00925.20 evalue:6.6e-13 score:47.8 best_domain_score:25.0 name:GTP_cyclohydro2;
sprot_desc Riboflavin biosynthesis protein RibBA;
sprot_id sp|B1H0I0|RIBBA_UNCTG;
sprot_target db:uniprot_sprot|sp|B1H0I0|RIBBA_UNCTG 4 348 evalue:2.7e-66 qcov:98.30 identity:40.10;
tigrfam_acc TIGR00506;
tigrfam_desc 3,4-dihydroxy-2-butanone-4-phosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribB;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00506 evalue:6.7e-70 score:233.9 best_domain_score:233.5 name:TIGR00506;
24388 25269 CDS
ID metaerg.pl|06052
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000055.1_11 3 271 evalue:1.0e-51 qcov:91.80 identity:46.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:6.2e-20 score:70.1 best_domain_score:68.5 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:1.2e-12 score:46.9 best_domain_score:45.9 name:LysR_substrate;
25466 26866 CDS
ID metaerg.pl|06053
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Luteimonas;s__Luteimonas huabeiensis;
genomedb_acc GCF_000559025.1;
genomedb_target db:genomedb|GCF_000559025.1|WP_081770033.1 4 459 evalue:5.5e-132 qcov:97.90 identity:55.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:8.5e-19 score:67.3 best_domain_score:62.1 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:5.3e-09 score:35.3 best_domain_score:28.6 name:Amidohydro_3;
sp YES;
25466 25519 lipoprotein_signal_peptide
ID metaerg.pl|06054
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
26928 28166 CDS
ID metaerg.pl|06055
allec_ids 2.7.13.3;
allgo_ids GO:0016021; GO:0005886; GO:0005524; GO:0000155;
allko_ids K07717; K13040; K10942; K04757; K10125; K11357; K02486; K07769; K07709; K13532; K06379; K10681; K11527; K02030; K07638; K07653; K07636; K08801; K02482; K02480; K07640; K07710; K07656; K01768; K07716; K08479; K07674; K02668; K03388; K07643; K07704; K08282; K07708; K07677; K07645; K11640; K02484; K07642; K11711; K07651; K07711; K08884; K07778; K07768; K07652; K07641; K07646; K08475; K07639; K07673; K03407; K07654; K07649; K07682;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Sulfuricellaceae;g__Sulfuricella_A;s__Sulfuricella_A denitrificans;
genomedb_acc GCA_002632355.1;
genomedb_target db:genomedb|GCA_002632355.1|NSJJ01000011.1_64 5 412 evalue:1.7e-68 qcov:99.00 identity:42.60;
kegg_pathway_id 03090; 02020; 05111; 00230; 00790;
kegg_pathway_name Type II secretion system; Two-component system - General; Vibrio cholerae pathogenic cycle; Purine metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF02518;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;
pfam_id HATPase_c;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:6.4e-09 score:35.6 best_domain_score:34.6 name:HATPase_c;
sprot_desc Sensor histidine kinase RegB;
sprot_id sp|P0C0Z0|REGB_RHOSH;
sprot_target db:uniprot_sprot|sp|P0C0Z0|REGB_RHOSH 13 355 evalue:4.1e-13 qcov:83.30 identity:25.40;
tm_num 6;
26928 28166 transmembrane_helix
ID metaerg.pl|06056
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i26973-27041o27051-27119i27156-27209o27219-27278i27291-27359o27387-27455i;
28163 28705 CDS
ID metaerg.pl|06057
allgo_ids GO:0043565; GO:0003677; GO:0000160;
allko_ids K02484; K11640; K11356; K07642; K02491; K07677; K07708; K08282; K07639; K08475; K01120; K07673; K07641; K07646; K07652; K07682; K07654; K03407; K07648; K07679; K07718; K07768; K07778; K07709; K07644; K06379; K10681; K07676; K07647; K07675; K12767; K13761; K02486; K10125; K11357; K04757; K07716; K02489; K07710; K03388; K02668; K08479; K11527; K10715; K07678; K02480; K02482; K07636; K07653; K15012;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Hydrogenophilaceae;g__Thiobacillus;s__Thiobacillus denitrificans_E;
genomedb_acc GCA_002403375.1;
genomedb_target db:genomedb|GCA_002403375.1|DHHQ01000017.1_79 8 177 evalue:1.0e-49 qcov:94.40 identity:64.70;
kegg_pathway_id 02020; 03090; 00230; 00790;
kegg_pathway_name Two-component system - General; Type II secretion system; Purine metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF02954; PF00072;
pfam_desc Bacterial regulatory protein, Fis family; Response regulator receiver domain;
pfam_id HTH_8; Response_reg;
pfam_target db:Pfam-A.hmm|PF02954.19 evalue:1.2e-11 score:43.4 best_domain_score:43.4 name:HTH_8; db:Pfam-A.hmm|PF00072.24 evalue:1.5e-21 score:75.9 best_domain_score:75.3 name:Response_reg;
sprot_desc Acid tolerance regulatory protein ActR;
sprot_id sp|P0C5S3|ACTR_RHIME;
sprot_target db:uniprot_sprot|sp|P0C5S3|ACTR_RHIME 4 176 evalue:7.5e-36 qcov:96.10 identity:50.90;
29273 28800 CDS
ID metaerg.pl|06058
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Hydrogenophilaceae;g__Thiobacillus;s__Thiobacillus denitrificans_B;
genomedb_acc GCF_000012745.1;
genomedb_target db:genomedb|GCF_000012745.1|WP_011311420.1 1 157 evalue:1.7e-21 qcov:100.00 identity:39.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
sp YES;
28800 28853 lipoprotein_signal_peptide
ID metaerg.pl|06059
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
30469 29270 CDS
ID metaerg.pl|06060
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__Pseudohongiella;s__Pseudohongiella acticola;
genomedb_acc GCF_001758195.1;
genomedb_target db:genomedb|GCF_001758195.1|WP_070115725.1 8 394 evalue:2.5e-85 qcov:97.00 identity:39.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
sp YES;
29270 29350 signal_peptide
ID metaerg.pl|06061
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
32700 30424 CDS
ID metaerg.pl|06062
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Cycloclasticaceae;g__Cycloclasticus;s__Cycloclasticus sp001566825;
genomedb_acc GCA_001566825.1;
genomedb_target db:genomedb|GCA_001566825.1|KXJ48141.1 34 758 evalue:3.7e-239 qcov:95.60 identity:55.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF14905; PF07715; PF00593;
pfam_desc Outer membrane protein beta-barrel family; TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id OMP_b-brl_3; Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF14905.6 evalue:4.6e-10 score:38.3 best_domain_score:37.7 name:OMP_b-brl_3; db:Pfam-A.hmm|PF07715.15 evalue:1.4e-13 score:50.6 best_domain_score:49.5 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:4.1e-44 score:151.5 best_domain_score:150.9 name:TonB_dep_Rec;
sp YES;
30424 30483 signal_peptide
ID metaerg.pl|06063
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
32992 35136 CDS
ID metaerg.pl|06064
allgo_ids GO:0009279; GO:0016021; GO:0005506; GO:0015344; GO:0038023; GO:0015675; GO:0006829;
allko_ids K02014;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas;s__Hyphomonas sp001464545;
genomedb_acc GCA_001464545.1;
genomedb_target db:genomedb|GCA_001464545.1|LNFC01000012.1_58 9 714 evalue:2.8e-252 qcov:98.90 identity:60.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF07715; PF00593;
pfam_desc TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:4.1e-14 score:52.3 best_domain_score:51.0 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:3.5e-61 score:207.7 best_domain_score:207.7 name:TonB_dep_Rec;
sp YES;
sprot_desc Metal-pseudopaline receptor CntO;
sprot_id sp|Q9HUX3|CNTO_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HUX3|CNTO_PSEAE 6 710 evalue:2.5e-98 qcov:98.70 identity:32.00;
tigrfam_acc TIGR01783;
tigrfam_desc TonB-dependent siderophore receptor;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TonB-siderophor;
tigrfam_sub1role Porins;
tigrfam_target db:TIGRFAMs.hmm|TIGR01783 evalue:2.7e-94 score:316.2 best_domain_score:316.0 name:TIGR01783;
32992 33069 signal_peptide
ID metaerg.pl|06065
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
35146 35868 CDS
ID metaerg.pl|06066
allgo_ids GO:0005524; GO:0016887;
allko_ids K01995; K10111; K01990; K02023; K02052; K02006; K06861; K01996; K02045;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Porphyrobacter;s__Porphyrobacter sp002215495;
genomedb_acc GCF_002215495.1;
genomedb_target db:genomedb|GCF_002215495.1|WP_088912559.1 6 236 evalue:8.0e-79 qcov:96.20 identity:67.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.6e-12 score:46.4 best_domain_score:35.0 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:6.1e-28 score:97.3 best_domain_score:96.9 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein sll0415;
sprot_id sp|P22040|Y415_SYNY3;
sprot_target db:uniprot_sprot|sp|P22040|Y415_SYNY3 21 214 evalue:1.3e-27 qcov:80.80 identity:39.60;
35865 37301 CDS
ID metaerg.pl|06067
allgo_ids GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Parvularcula;s__Parvularcula bermudensis;
genomedb_acc GCF_000152825.2;
genomedb_target db:genomedb|GCF_000152825.2|WP_013301754.1 1 477 evalue:7.5e-153 qcov:99.80 identity:59.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF12679; PF12040;
pfam_desc ABC-2 family transporter protein; Domain of unknown function (DUF3526);
pfam_id ABC2_membrane_2; DUF3526;
pfam_target db:Pfam-A.hmm|PF12679.7 evalue:7.8e-19 score:67.3 best_domain_score:66.6 name:ABC2_membrane_2; db:Pfam-A.hmm|PF12040.8 evalue:3.9e-39 score:133.9 best_domain_score:133.9 name:DUF3526;
tm_num 7;
35865 37301 transmembrane_helix
ID metaerg.pl|06068
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology o35922-35990i36258-36317o36396-36464i36483-36551o36579-36647i36918-36986o37215-37283i;
37298 38542 CDS
ID metaerg.pl|06069
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Parvularculaceae;g__Parvularcula;s__Parvularcula bermudensis;
genomedb_acc GCF_000152825.2;
genomedb_target db:genomedb|GCF_000152825.2|WP_013301753.1 14 414 evalue:1.3e-140 qcov:96.90 identity:62.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF12040;
pfam_desc Domain of unknown function (DUF3526);
pfam_id DUF3526;
pfam_target db:Pfam-A.hmm|PF12040.8 evalue:2.5e-31 score:108.5 best_domain_score:107.3 name:DUF3526;
tm_num 5;
37298 38542 transmembrane_helix
ID metaerg.pl|06070
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i37355-37414o37676-37744i37835-37903o37916-37984i38003-38071o;
38679 39767 CDS
ID metaerg.pl|06071
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Akkermansiaceae;g__UBA1315;s__UBA1315 sp002307065;
genomedb_acc GCA_002307065.1;
genomedb_target db:genomedb|GCA_002307065.1|DBTN01000022.1_4 34 360 evalue:1.1e-98 qcov:90.30 identity:53.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF09982;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2219);
pfam_id DUF2219;
pfam_target db:Pfam-A.hmm|PF09982.9 evalue:1.4e-74 score:250.2 best_domain_score:250.0 name:DUF2219;
sp YES;
tm_num 1;
38679 38750 signal_peptide
ID metaerg.pl|06072
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
38679 39767 transmembrane_helix
ID metaerg.pl|06073
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i38697-38756o;
40803 39796 CDS
ID metaerg.pl|06074
allgo_ids GO:0009116;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria;s__Ruegeria atlantica;
genomedb_acc GCF_001458195.1;
genomedb_target db:genomedb|GCF_001458195.1|WP_058278514.1 9 317 evalue:1.9e-86 qcov:92.20 identity:53.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:1.4e-08 score:33.6 best_domain_score:32.9 name:Pribosyltran;
41497 40910 CDS
ID metaerg.pl|06075
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000007.1_2 7 193 evalue:1.7e-66 qcov:95.90 identity:67.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
sp YES;
40910 40996 signal_peptide
ID metaerg.pl|06076
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
41583 42023 CDS
ID metaerg.pl|06077
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0044212;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000007.1_3 5 140 evalue:4.2e-46 qcov:93.20 identity:72.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF13463; PF01047; PF12802; PF03551;
pfam_desc Winged helix DNA-binding domain; MarR family; MarR family; Transcriptional regulator PadR-like family;
pfam_id HTH_27; MarR; MarR_2; PadR;
pfam_target db:Pfam-A.hmm|PF13463.6 evalue:8.5e-05 score:22.2 best_domain_score:20.8 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:3.4e-13 score:48.5 best_domain_score:47.8 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:6e-08 score:31.7 best_domain_score:30.4 name:MarR_2; db:Pfam-A.hmm|PF03551.14 evalue:1.7e-06 score:27.1 best_domain_score:26.6 name:PadR;
sprot_desc Organic hydroperoxide resistance transcriptional regulator;
sprot_id sp|O34777|OHRR_BACSU;
sprot_target db:uniprot_sprot|sp|O34777|OHRR_BACSU 5 138 evalue:1.2e-23 qcov:91.80 identity:40.60;
43882 42020 CDS
ID metaerg.pl|06078
allgo_ids GO:0005524; GO:0016021; GO:0005886; GO:0016887; GO:0042626;
allko_ids K02000; K02023; K01995; K02049; K10111; K02045; K06861; K02071; K01996; K02010; K05847; K02006; K02052; K06147;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2965;s__UBA2965 sp002348385;
genomedb_acc GCA_002348385.1;
genomedb_target db:genomedb|GCA_002348385.1|DEBD01000028.1_172 1 619 evalue:1.5e-198 qcov:99.80 identity:59.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF13304; PF00664; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter transmembrane region; ABC transporter;
pfam_id AAA_21; ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2e-07 score:30.4 best_domain_score:13.9 name:AAA_21; db:Pfam-A.hmm|PF00664.23 evalue:1.5e-34 score:119.2 best_domain_score:118.8 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:1.3e-30 score:105.9 best_domain_score:104.6 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YknV;
sprot_id sp|O31708|YKNV_BACSU;
sprot_target db:uniprot_sprot|sp|O31708|YKNV_BACSU 30 617 evalue:9.7e-83 qcov:94.80 identity:34.90;
tm_num 5;
43882 42020 transmembrane_helix
ID metaerg.pl|06079
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i42155-42223o42311-42379i42545-42613o42626-42694i42920-42988o;
45672 43879 CDS
ID metaerg.pl|06080
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887;
allko_ids K01996; K06861; K02045; K02006; K02052; K06147;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000245.1_8 25 596 evalue:2.3e-175 qcov:95.80 identity:56.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:5.8e-37 score:127.0 best_domain_score:126.8 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:2.2e-28 score:98.7 best_domain_score:97.9 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YknV;
sprot_id sp|O31708|YKNV_BACSU;
sprot_target db:uniprot_sprot|sp|O31708|YKNV_BACSU 9 592 evalue:3.8e-76 qcov:97.80 identity:32.20;
tm_num 6;
45672 43879 transmembrane_helix
ID metaerg.pl|06081
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i43993-44061o44104-44160i44311-44379o44389-44457i44674-44742o44770-44838i;
45923 47332 CDS
ID metaerg.pl|06082
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000030.1_65 10 464 evalue:7.1e-79 qcov:97.00 identity:44.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF14344;
pfam_desc Domain of unknown function (DUF4397);
pfam_id DUF4397;
pfam_target db:Pfam-A.hmm|PF14344.6 evalue:3e-44 score:149.9 best_domain_score:69.2 name:DUF4397;
sp YES;
45923 45967 lipoprotein_signal_peptide
ID metaerg.pl|06083
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
47381 47974 CDS
ID metaerg.pl|06084
allgo_ids GO:0008654; GO:0016020; GO:0016780;
allko_ids K00998;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726355.1 9 191 evalue:6.0e-48 qcov:92.90 identity:57.40;
kegg_pathway_id 00260; 00564;
kegg_pathway_name Glycine, serine and threonine metabolism; Glycerophospholipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF01066;
pfam_desc CDP-alcohol phosphatidyltransferase;
pfam_id CDP-OH_P_transf;
pfam_target db:Pfam-A.hmm|PF01066.21 evalue:4.6e-16 score:58.6 best_domain_score:58.6 name:CDP-OH_P_transf;
tm_num 5;
47381 47974 transmembrane_helix
ID metaerg.pl|06085
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology o47417-47485i47489-47557o47615-47683i47765-47833o47861-47929i;
49374 47977 CDS
ID metaerg.pl|06086
allec_ids 6.1.1.22;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004816; GO:0003676; GO:0006421;
allko_ids K01893;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Competibacterales;f__Competibacteraceae;g__Contendobacter;s__Contendobacter sp002352185;
genomedb_acc GCA_002352185.1;
genomedb_target db:genomedb|GCA_002352185.1|DEHY01000091.1_17 1 465 evalue:1.3e-197 qcov:100.00 identity:70.40;
kegg_pathway_id 00970; 00252;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Alanine and aspartate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00152; PF01336;
pfam_desc tRNA synthetases class II (D, K and N) ; OB-fold nucleic acid binding domain;
pfam_id tRNA-synt_2; tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF00152.20 evalue:2e-82 score:276.0 best_domain_score:275.7 name:tRNA-synt_2; db:Pfam-A.hmm|PF01336.25 evalue:1.3e-10 score:40.3 best_domain_score:39.0 name:tRNA_anti-codon;
sprot_desc Asparagine--tRNA ligase;
sprot_id sp|Q2SJV9|SYN_HAHCH;
sprot_target db:uniprot_sprot|sp|Q2SJV9|SYN_HAHCH 1 465 evalue:3.5e-194 qcov:100.00 identity:67.30;
tigrfam_acc TIGR00457;
tigrfam_desc asparagine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name asnS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00457 evalue:5e-189 score:628.0 best_domain_score:627.8 name:TIGR00457;
49584 50393 CDS
ID metaerg.pl|06087
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA9926;s__UBA9926 sp002689445;
genomedb_acc GCA_002689445.1;
genomedb_target db:genomedb|GCA_002689445.1|MAI54721.1 10 269 evalue:8.0e-43 qcov:96.70 identity:44.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF11219;
pfam_desc Protein of unknown function (DUF3014);
pfam_id DUF3014;
pfam_target db:Pfam-A.hmm|PF11219.8 evalue:8.4e-48 score:161.8 best_domain_score:161.4 name:DUF3014;
sp YES;
tm_num 1;
49584 49670 signal_peptide
ID metaerg.pl|06088
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
49584 50393 transmembrane_helix
ID metaerg.pl|06089
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i49602-49655o;
51570 50398 CDS
ID metaerg.pl|06090
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Parvibaculaceae;g__Tepidicaulis;s__Tepidicaulis sp002389665;
genomedb_acc GCA_002389665.1;
genomedb_target db:genomedb|GCA_002389665.1|DGNO01000001.1_687 3 385 evalue:1.0e-147 qcov:98.20 identity:65.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF13480; PF04339;
pfam_desc Acetyltransferase (GNAT) domain; Peptidogalycan biosysnthesis/recognition;
pfam_id Acetyltransf_6; FemAB_like;
pfam_target db:Pfam-A.hmm|PF13480.7 evalue:1.4e-12 score:47.2 best_domain_score:47.2 name:Acetyltransf_6; db:Pfam-A.hmm|PF04339.12 evalue:9.4e-156 score:517.8 best_domain_score:517.6 name:FemAB_like;
51839 52987 CDS
ID metaerg.pl|06091
allgo_ids GO:0005886; GO:0055085;
allko_ids K07799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A sulfidiphilus_A;
genomedb_acc GCF_000377945.1;
genomedb_target db:genomedb|GCF_000377945.1|WP_018954286.1 12 351 evalue:8.3e-78 qcov:89.00 identity:48.40;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF13533; PF13437; PF16576;
pfam_desc Biotin-lipoyl like; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF13533.6 evalue:5e-07 score:28.7 best_domain_score:25.3 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:7.2e-12 score:45.2 best_domain_score:38.8 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:3.5e-28 score:97.5 best_domain_score:97.0 name:HlyD_D23;
sprot_desc Multidrug resistance protein MdtA;
sprot_id sp|A1JKX1|MDTA_YERE8;
sprot_target db:uniprot_sprot|sp|A1JKX1|MDTA_YERE8 63 353 evalue:9.1e-23 qcov:76.20 identity:28.30;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:6.6e-72 score:241.3 best_domain_score:241.1 name:TIGR01730;
tm_num 1;
51839 52987 transmembrane_helix
ID metaerg.pl|06092
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i51857-51925o;
52984 56157 CDS
ID metaerg.pl|06093
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886;
allko_ids K18138;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A sulfidiphilus;
genomedb_acc GCF_000021985.1;
genomedb_target db:genomedb|GCF_000021985.1|WP_012637284.1 1 1028 evalue:0.0e+00 qcov:97.30 identity:63.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00873; PF03176;
pfam_desc AcrB/AcrD/AcrF family; MMPL family;
pfam_id ACR_tran; MMPL;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:0 score:1023.6 best_domain_score:1023.4 name:ACR_tran; db:Pfam-A.hmm|PF03176.15 evalue:3.1e-18 score:65.0 best_domain_score:39.5 name:MMPL;
sprot_desc Uncharacterized transporter HI_0895;
sprot_id sp|Q57124|Y895_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57124|Y895_HAEIN 1 1012 evalue:2.2e-159 qcov:95.70 identity:35.70;
tm_num 12;
52984 56157 transmembrane_helix
ID metaerg.pl|06094
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i53017-53070o53983-54051i54055-54123o54133-54201i54274-54342o54370-54438i54559-54612o55540-55608i55627-55695o55708-55776i55837-55905o55933-56001i;
56150 58630 CDS
ID metaerg.pl|06095
allec_ids 3.2.1.21;
allgo_ids GO:0004553; GO:0005975; GO:0005737; GO:0008422; GO:0102483;
allko_ids K01198; K01188; K01207; K05349;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Chloroflexia;o__Chloroflexales;f__Roseiflexaceae;g__Roseiflexus;s__Roseiflexus castenholzii;
genomedb_acc GCF_000017805.1;
genomedb_target db:genomedb|GCF_000017805.1|WP_012119464.1 6 825 evalue:2.1e-211 qcov:99.30 identity:49.50;
kegg_pathway_id 00940; 00460; 00530; 00500; 01032; 00520;
kegg_pathway_name Phenylpropanoid biosynthesis; Cyanoamino acid metabolism; Aminosugars metabolism; Starch and sucrose metabolism; Glycan structures - degradation; Nucleotide sugars metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY-4441; PWY-6002; PWY-3121; PWY-5176;
metacyc_pathway_name DIMBOA-glucoside activation;; lotaustralin degradation;; linamarin degradation;; coumarin biosynthesis (via 2-coumarate);;
metacyc_pathway_type Activation;; CYANOGENIC-GLUCOSIDE-DEG;; CYANOGENIC-GLUCOSIDE-DEG;; COUMARIN-SYN;;
pfam_acc PF14310; PF00933; PF01915; PF07691;
pfam_desc Fibronectin type III-like domain; Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 C-terminal domain; PA14 domain;
pfam_id Fn3-like; Glyco_hydro_3; Glyco_hydro_3_C; PA14;
pfam_target db:Pfam-A.hmm|PF14310.6 evalue:3.1e-19 score:68.1 best_domain_score:66.9 name:Fn3-like; db:Pfam-A.hmm|PF00933.21 evalue:8.8e-55 score:185.5 best_domain_score:184.8 name:Glyco_hydro_3; db:Pfam-A.hmm|PF01915.22 evalue:1.8e-55 score:187.3 best_domain_score:186.1 name:Glyco_hydro_3_C; db:Pfam-A.hmm|PF07691.12 evalue:5.2e-13 score:48.3 best_domain_score:47.6 name:PA14;
sprot_desc Beta-glucosidase;
sprot_id sp|P27034|BGLS_RHIRD;
sprot_target db:uniprot_sprot|sp|P27034|BGLS_RHIRD 9 819 evalue:8.2e-178 qcov:98.20 identity:44.10;
58657 59961 CDS
ID metaerg.pl|06096
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Fibrobacterota;c__Chitinivibrionia;o__Chitinivibrionales;f__Chitinispirillaceae;g__Chitinispirillum;s__Chitinispirillum alkaliphilum;
genomedb_acc GCA_001045525.1;
genomedb_target db:genomedb|GCA_001045525.1|KMQ52068.1 24 417 evalue:2.5e-86 qcov:90.80 identity:46.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF10011;
pfam_desc Predicted membrane protein (DUF2254);
pfam_id DUF2254;
pfam_target db:Pfam-A.hmm|PF10011.9 evalue:1.7e-91 score:306.0 best_domain_score:305.8 name:DUF2254;
sprot_desc hypothetical protein;
sprot_id sp|P9WM34|Y1290_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WM34|Y1290_MYCTO 25 432 evalue:5.0e-25 qcov:94.00 identity:25.30;
tm_num 4;
58657 59961 transmembrane_helix
ID metaerg.pl|06097
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i58726-58794o58873-58941i59002-59070o59083-59151i;
60000 60752 CDS
ID metaerg.pl|06098
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
sp YES;
tm_num 1;
60000 60071 signal_peptide
ID metaerg.pl|06099
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
60000 60752 transmembrane_helix
ID metaerg.pl|06100
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology o60660-60719i;
61031 61723 CDS
ID metaerg.pl|06101
allec_ids 3.6.1.1;
allgo_ids GO:0000287; GO:0004427; GO:0005737; GO:0006796;
allko_ids K01507;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__UBA2329;s__UBA2329 sp002344975;
genomedb_acc GCA_002344975.1;
genomedb_target db:genomedb|GCA_002344975.1|DDUV01000072.1_9 1 225 evalue:1.6e-84 qcov:97.80 identity:61.90;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00719;
pfam_desc Inorganic pyrophosphatase;
pfam_id Pyrophosphatase;
pfam_target db:Pfam-A.hmm|PF00719.19 evalue:7e-46 score:155.2 best_domain_score:154.9 name:Pyrophosphatase;
sprot_desc Inorganic pyrophosphatase;
sprot_id sp|Q9PLF1|IPYR_CHLMU;
sprot_target db:uniprot_sprot|sp|Q9PLF1|IPYR_CHLMU 20 210 evalue:6.8e-58 qcov:83.00 identity:54.80;
61743 63431 CDS
ID metaerg.pl|06102
allec_ids 6.2.1.12;
allgo_ids GO:0003824; GO:0016207; GO:0005524; GO:0009698; GO:0010584;
allko_ids K01897; K01652; K00666; K01904; K01909; K01895; K01779; K01912; K00992; K02364; K05939; K01586; K01913; K03367; K00143; K01776;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA11889;s__UBA11889 sp002313255;
genomedb_acc GCA_002313255.1;
genomedb_target db:genomedb|GCA_002313255.1|DCBA01000123.1_37 1 560 evalue:4.8e-191 qcov:99.60 identity:57.90;
kegg_pathway_id 00071; 00360; 00061; 00660; 00471; 00251; 00252; 00473; 01053; 00930; 00770; 00290; 00010; 00310; 00281; 00564; 00960; 00300; 00640; 00650; 00620; 00903; 00632; 00940; 00720;
kegg_pathway_name Fatty acid metabolism; Phenylalanine metabolism; Fatty acid biosynthesis; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Glutamate metabolism; Alanine and aspartate metabolism; D-Alanine metabolism; Biosynthesis of siderophore group nonribosomal peptides; Caprolactam degradation; Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine biosynthesis; Glycolysis / Gluconeogenesis; Lysine degradation; Geraniol degradation; Glycerophospholipid metabolism; Alkaloid biosynthesis II; Lysine biosynthesis; Propanoate metabolism; Butanoate metabolism; Pyruvate metabolism; Limonene and pinene degradation; Benzoate degradation via CoA ligation; Phenylpropanoid biosynthesis; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY-5135; PWY-6435; PWY-5754; PWY-6320;
metacyc_pathway_name xanthohumol biosynthesis;; 4-hydroxybenzoate biosynthesis III (plants);; 4-hydroxybenzoate biosynthesis I (eukaryotes);; phaselate biosynthesis;;
metacyc_pathway_type PRENYLFLAVONOID-SYN;; 4-Hydroxybenzoate-Biosynthesis;; 4-Hydroxybenzoate-Biosynthesis;; AROMATIC-COMPOUNDS-BIOSYN;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:6.1e-97 score:324.1 best_domain_score:323.8 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:3.4e-18 score:65.6 best_domain_score:65.6 name:AMP-binding_C;
sprot_desc Probable 4-coumarate--CoA ligase 2;
sprot_id sp|Q42982|4CL2_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q42982|4CL2_ORYSJ 65 558 evalue:1.9e-61 qcov:87.90 identity:31.40;
tm_num 1;
61743 63431 transmembrane_helix
ID metaerg.pl|06103
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i62046-62114o;
63624 64517 CDS
ID metaerg.pl|06104
allec_ids 4.1.2.13;
allgo_ids GO:0004332; GO:0006096;
allko_ids K01623;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ga0077536;f__Ga0077536;g__Ga0077536;s__Ga0077536 sp001464935;
genomedb_acc GCA_001464935.1;
genomedb_target db:genomedb|GCA_001464935.1|LNEL01000036.1_31 1 297 evalue:4.6e-116 qcov:100.00 identity:74.10;
kegg_pathway_id 00710; 00051; 00010; 00030;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Fructose and mannose metabolism; Glycolysis / Gluconeogenesis; Pentose phosphate pathway;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id GLYCOLYSIS; GLYCOLYSIS-E-D; PWY-6146; P185-PWY; PHOTOALL-PWY; GLUCONEO-PWY; CALVIN-PWY; PWY-6142; P341-PWY; P461-PWY; PWY66-373; PWY-5484; GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAGLYCOLYSIS-PWY; PWY-1861; PWY-5464; PWY-1042; PWY-3801; ANAEROFRUCAT-PWY; P441-PWY;
metacyc_pathway_name glycolysis I (from glucose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; formaldehyde assimilation III (dihydroxyacetone cycle);; oxygenic photosynthesis;; gluconeogenesis I;; Calvin-Benson-Bassham cycle;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; glycolysis V (Pyrococcus);; hexitol fermentation to lactate, formate, ethanol and acetate;; sucrose degradation V (sucrose α-glucosidase);; glycolysis II (from fructose 6-phosphate);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis III (from glucose);; formaldehyde assimilation II (assimilatory RuMP Cycle);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);; homolactic fermentation;; superpathway of N-acetylneuraminate degradation;;
metacyc_pathway_type GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Biosynthesis; Super-Pathways;; Formaldehyde-Assimilation;; Photosynthesis; Super-Pathways;; Gluconeogenesis;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; Gluconeogenesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Formaldehyde-Assimilation;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Fermentation-to-Lactate; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;;
pfam_acc PF00274;
pfam_desc Fructose-bisphosphate aldolase class-I;
pfam_id Glycolytic;
pfam_target db:Pfam-A.hmm|PF00274.19 evalue:2.9e-08 score:32.1 best_domain_score:30.7 name:Glycolytic;
sprot_desc Fructose-bisphosphate aldolase class 1;
sprot_id sp|P74309|ALF1_SYNY3;
sprot_target db:uniprot_sprot|sp|P74309|ALF1_SYNY3 5 297 evalue:6.7e-106 qcov:98.70 identity:67.60;
64674 68453 CDS
ID metaerg.pl|06105
allgo_ids GO:0009190; GO:0016849; GO:0035556;
allko_ids K01768; K05345; K01769; K08884; K07673; K11265; K08282;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__SG8-41;s__SG8-41 sp001303585;
genomedb_acc GCA_001303585.1;
genomedb_target db:genomedb|GCA_001303585.1|KPK13785.1 110 1250 evalue:1.7e-268 qcov:90.60 identity:48.60;
kegg_pathway_id 02020; 00230;
kegg_pathway_name Two-component system - General; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF13191; PF00211; PF13424; PF17874;
pfam_desc AAA ATPase domain; Adenylate and Guanylate cyclase catalytic domain; Tetratricopeptide repeat; MalT-like TPR region;
pfam_id AAA_16; Guanylate_cyc; TPR_12; TPR_MalT;
pfam_target db:Pfam-A.hmm|PF13191.6 evalue:5.5e-15 score:55.4 best_domain_score:55.4 name:AAA_16; db:Pfam-A.hmm|PF00211.20 evalue:2.2e-27 score:95.1 best_domain_score:55.5 name:Guanylate_cyc; db:Pfam-A.hmm|PF13424.6 evalue:7.6e-13 score:47.8 best_domain_score:28.5 name:TPR_12; db:Pfam-A.hmm|PF17874.1 evalue:2.1e-07 score:29.9 best_domain_score:29.0 name:TPR_MalT;
70327 68507 CDS
ID metaerg.pl|06106
allec_ids 3.1.1.5;
allgo_ids GO:0006629; GO:0005783; GO:0005789; GO:0016021; GO:0016020; GO:0004622; GO:0046475; GO:0046470;
allko_ids K14676;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas sp001801685;
genomedb_acc GCA_001801685.1;
genomedb_target db:genomedb|GCA_001801685.1|OGT60719.1 2 604 evalue:7.8e-163 qcov:99.50 identity:52.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00027; PF01734;
pfam_desc Cyclic nucleotide-binding domain; Patatin-like phospholipase;
pfam_id cNMP_binding; Patatin;
pfam_target db:Pfam-A.hmm|PF00027.29 evalue:3.2e-19 score:68.0 best_domain_score:67.1 name:cNMP_binding; db:Pfam-A.hmm|PF01734.22 evalue:1.8e-20 score:73.2 best_domain_score:62.5 name:Patatin;
sprot_desc Neuropathy target esterase;
sprot_id sp|Q8IY17|PLPL6_HUMAN;
sprot_target db:uniprot_sprot|sp|Q8IY17|PLPL6_HUMAN 35 596 evalue:1.7e-63 qcov:92.70 identity:29.20;
71664 70342 CDS
ID metaerg.pl|06107
allgo_ids GO:0005524;
allko_ids K01120; K13757; K02071; K06861; K01996; K13298; K02068; K11072; K02045; K02478; K09810; K02004; K02006; K02052; K02010; K05847; K01997; K02003; K02032; K02017; K07704; K08718; K13762; K02023; K02018; K09812; K11962; K02000; K02480; K10111; K10112; K01998; K02049; K13763; K02065; K01995; K13756; K05816;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas sp001801685;
genomedb_acc GCA_001801685.1;
genomedb_target db:genomedb|GCA_001801685.1|OGT60718.1 4 433 evalue:1.3e-156 qcov:97.70 identity:69.10;
kegg_pathway_id 00230; 02020; 02010;
kegg_pathway_name Purine metabolism; Two-component system - General; ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF13304; PF00005; PF01590; PF13185;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; GAF domain; GAF domain;
pfam_id AAA_21; ABC_tran; GAF; GAF_2;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.6e-06 score:27.4 best_domain_score:13.1 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:5.3e-31 score:107.2 best_domain_score:106.1 name:ABC_tran; db:Pfam-A.hmm|PF01590.26 evalue:2.6e-13 score:50.0 best_domain_score:47.7 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:3.9e-09 score:36.2 best_domain_score:34.7 name:GAF_2;
tigrfam_acc TIGR02982;
tigrfam_desc ABC exporter ATP-binding subunit, DevA family;
tigrfam_name heterocyst_DevA;
tigrfam_target db:TIGRFAMs.hmm|TIGR02982 evalue:1.9e-100 score:334.1 best_domain_score:333.6 name:TIGR02982;
72826 71666 CDS
ID metaerg.pl|06108
allgo_ids GO:0016020;
allko_ids K09808; K02004;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas sp001801685;
genomedb_acc GCA_001801685.1;
genomedb_target db:genomedb|GCA_001801685.1|OGT60717.1 5 386 evalue:1.7e-155 qcov:99.00 identity:72.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF02687;
pfam_desc FtsX-like permease family;
pfam_id FtsX;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:8e-09 score:35.1 best_domain_score:35.1 name:FtsX;
tigrfam_acc TIGR01185;
tigrfam_desc ABC exporter transmembrane subunit, DevC protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name devC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01185 evalue:1.4e-129 score:431.5 best_domain_score:431.4 name:TIGR01185;
tm_num 4;
72826 71666 transmembrane_helix
ID metaerg.pl|06109
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i71726-71785o72458-72526i72587-72655o72713-72781i;
73778 72837 CDS
ID metaerg.pl|06110
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas sp001801685;
genomedb_acc GCA_001801685.1;
genomedb_target db:genomedb|GCA_001801685.1|OGT60716.1 28 311 evalue:1.6e-71 qcov:90.70 identity:56.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF13437; PF16576;
pfam_desc HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF13437.6 evalue:1.8e-06 score:27.9 best_domain_score:26.4 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:2.4e-09 score:36.0 best_domain_score:35.5 name:HlyD_D23;
sp YES;
tigrfam_acc TIGR02971;
tigrfam_desc ABC exporter membrane fusion protein, DevB family;
tigrfam_name heterocyst_DevB;
tigrfam_target db:TIGRFAMs.hmm|TIGR02971 evalue:4.2e-54 score:183.3 best_domain_score:157.7 name:TIGR02971;
tm_num 1;
72837 72926 signal_peptide
ID metaerg.pl|06111
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
73778 72837 transmembrane_helix
ID metaerg.pl|06112
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i72873-72941o;
75314 74022 CDS
ID metaerg.pl|06113
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
sp YES;
tm_num 1;
74022 74108 signal_peptide
ID metaerg.pl|06114
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
75314 74022 transmembrane_helix
ID metaerg.pl|06115
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i74055-74123o;
76015 75545 CDS
ID metaerg.pl|06116
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__GCA-2695345;s__GCA-2695345 sp002695345;
genomedb_acc GCA_002695345.1;
genomedb_target db:genomedb|GCA_002695345.1|MAL99144.1 9 156 evalue:3.4e-30 qcov:94.90 identity:49.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
sp YES;
tm_num 2;
75545 75640 signal_peptide
ID metaerg.pl|06117
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
76015 75545 transmembrane_helix
ID metaerg.pl|06118
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i75725-75793o75935-76003i;
77236 76067 CDS
ID metaerg.pl|06119
allec_ids 4.4.1.13;
allgo_ids GO:0030170; GO:0005737; GO:0016846; GO:0004121; GO:0004123; GO:0003962; GO:0047804; GO:0019343; GO:0009086; GO:0019346;
allko_ids K01739; K01758; K01760;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_A;s__Halomonas_A anticariensis;
genomedb_acc GCF_000409775.1;
genomedb_target db:genomedb|GCF_000409775.1|WP_016415433.1 7 386 evalue:1.8e-173 qcov:97.70 identity:77.90;
kegg_pathway_id 00272; 00260; 00920; 00271; 00450; 00910;
kegg_pathway_name Cysteine metabolism; Glycine, serine and threonine metabolism; Sulfur metabolism; Methionine metabolism; Selenoamino acid metabolism; Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF01053;
pfam_desc Cys/Met metabolism PLP-dependent enzyme;
pfam_id Cys_Met_Meta_PP;
pfam_target db:Pfam-A.hmm|PF01053.20 evalue:4.6e-145 score:482.2 best_domain_score:482.0 name:Cys_Met_Meta_PP;
sprot_desc Cystathionine beta-lyase;
sprot_id sp|Q83A83|METC_COXBU;
sprot_target db:uniprot_sprot|sp|Q83A83|METC_COXBU 3 386 evalue:3.5e-147 qcov:98.70 identity:63.80;
78619 77249 CDS
ID metaerg.pl|06120
allec_ids 4.2.1.22;
allgo_ids GO:0005737; GO:0005634; GO:0070025; GO:0004122; GO:0004124; GO:0019899; GO:0020037; GO:0042802; GO:0046872; GO:0072341; GO:0070026; GO:0050421; GO:0019825; GO:0042803; GO:0030170; GO:1904047; GO:0031625; GO:0001974; GO:0060351; GO:0071456; GO:0021587; GO:0019344; GO:0006535; GO:0019343; GO:0001958; GO:0043418; GO:0050667; GO:0070814; GO:0006563; GO:0060135; GO:0043066; GO:0050880; GO:0043506; GO:0010749; GO:0051593; GO:0006801; GO:0019346;
allko_ids K01738; K10150; K00088; K12339; K13034; K01754; K01697; K01733;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas heilongjiangensis;
genomedb_acc GCF_002879645.1;
genomedb_target db:genomedb|GCF_002879645.1|WP_102629786.1 1 456 evalue:7.1e-201 qcov:100.00 identity:74.80;
kegg_pathway_id 00290; 00983; 00271; 00920; 00272; 00230; 00260; 00450; 00750;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Drug metabolism - other enzymes; Methionine metabolism; Sulfur metabolism; Cysteine metabolism; Purine metabolism; Glycine, serine and threonine metabolism; Selenoamino acid metabolism; Vitamin B6 metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY-5328; PWY-6293; HOMOCYSDEGR-PWY; PWY-821; PWY-6292; PWY-801;
metacyc_pathway_name superpathway of L-methionine salvage and degradation;; superpathway of L-cysteine biosynthesis (fungi);; L-cysteine biosynthesis III (from L-homocysteine);; superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae);; superpathway of L-cysteine biosynthesis (mammalian);; homocysteine and cysteine interconversion;;
metacyc_pathway_type METHIONINE-DEG; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; CYSTEINE-SYN; HOMOCYSTEINE-DEG;; Amino-Acid-Biosynthesis; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; CYSTEINE-SYN; Interconversion;;
pfam_acc PF00571; PF00291;
pfam_desc CBS domain; Pyridoxal-phosphate dependent enzyme;
pfam_id CBS; PALP;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:5.1e-12 score:45.3 best_domain_score:24.3 name:CBS; db:Pfam-A.hmm|PF00291.25 evalue:5.5e-61 score:205.8 best_domain_score:205.4 name:PALP;
sprot_desc Cystathionine beta-synthase;
sprot_id sp|Q91WT9|CBS_MOUSE;
sprot_target db:uniprot_sprot|sp|Q91WT9|CBS_MOUSE 2 432 evalue:5.3e-70 qcov:94.50 identity:37.20;
78722 79426 CDS
ID metaerg.pl|06121
allec_ids 5.1.1.13;
allgo_ids GO:0006807; GO:0036361; GO:0047689;
allko_ids K01779;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Pseudohaliea;s__Pseudohaliea rubra;
genomedb_acc GCF_000764025.1;
genomedb_target db:genomedb|GCF_000764025.1|WP_035514142.1 4 226 evalue:4.6e-71 qcov:95.30 identity:65.50;
kegg_pathway_id 00252;
kegg_pathway_name Alanine and aspartate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF01177;
pfam_desc Asp/Glu/Hydantoin racemase;
pfam_id Asp_Glu_race;
pfam_target db:Pfam-A.hmm|PF01177.22 evalue:1.8e-49 score:167.8 best_domain_score:167.7 name:Asp_Glu_race;
sprot_desc Aspartate racemase;
sprot_id sp|O93779|RACD_THEK8;
sprot_target db:uniprot_sprot|sp|O93779|RACD_THEK8 8 230 evalue:7.8e-33 qcov:95.30 identity:37.90;
tigrfam_acc TIGR00035;
tigrfam_desc aspartate racemase;
tigrfam_mainrole Energy metabolism;
tigrfam_name asp_race;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00035 evalue:1.2e-47 score:161.6 best_domain_score:161.5 name:TIGR00035;
79446 80447 CDS
ID metaerg.pl|06122
allec_ids 4.4.1.25;
allgo_ids GO:0034011;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Haliea;s__Haliea salexigens;
genomedb_acc GCF_000423125.1;
genomedb_target db:genomedb|GCF_000423125.1|WP_027949954.1 1 330 evalue:2.9e-135 qcov:99.10 identity:75.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:1.9e-54 score:184.3 best_domain_score:184.2 name:PALP;
sprot_desc L-cysteate sulfo-lyase;
sprot_id sp|A3SQG3|CUYA_ROSNI;
sprot_target db:uniprot_sprot|sp|A3SQG3|CUYA_ROSNI 1 331 evalue:7.7e-111 qcov:99.40 identity:61.60;
tigrfam_acc TIGR01275;
tigrfam_desc pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family;
tigrfam_name ACC_deam_rel;
tigrfam_target db:TIGRFAMs.hmm|TIGR01275 evalue:1.5e-99 score:332.5 best_domain_score:332.3 name:TIGR01275;
82414 80507 CDS
ID metaerg.pl|06123
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37881.1 11 629 evalue:3.6e-211 qcov:97.50 identity:60.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF13336;
pfam_desc Acetyl-CoA hydrolase/transferase C-terminal domain;
pfam_id AcetylCoA_hyd_C;
pfam_target db:Pfam-A.hmm|PF13336.6 evalue:6.4e-45 score:152.1 best_domain_score:151.6 name:AcetylCoA_hyd_C;
82454 82918 CDS
ID metaerg.pl|06124
allko_ids K01768;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__Palsa-1233;s__Palsa-1233 sp003169895;
genomedb_acc GCA_003169895.1;
genomedb_target db:genomedb|GCA_003169895.1|PNAE01000007.1_1529 1 154 evalue:2.0e-51 qcov:100.00 identity:64.50;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF01928;
pfam_desc CYTH domain;
pfam_id CYTH;
pfam_target db:Pfam-A.hmm|PF01928.21 evalue:3.3e-12 score:45.9 best_domain_score:45.8 name:CYTH;
83032 84921 CDS
ID metaerg.pl|06125
allec_ids 3.6.3.41;
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0003677; GO:0004832; GO:0006438;
allko_ids K02032; K05847; K09817; K02056; K02010; K02052; K02006; K11072; K02045; K01996; K06861; K02071; K10441; K02013; K09687; K06857; K05816; K02193; K02049; K01995; K02065; K01998; K10111; K02000; K01990; K02023; K15738;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Pseudoxanthomonas_A;s__Pseudoxanthomonas_A mexicana;
genomedb_acc GCF_001556105.1;
genomedb_target db:genomedb|GCF_001556105.1|WP_062358399.1 1 624 evalue:3.0e-226 qcov:99.20 identity:66.50;
kegg_pathway_id 00910; 02010;
kegg_pathway_name Nitrogen metabolism; ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00004; PF13191; PF13304; PF13401; PF13476; PF13555; PF07728; PF00005; PF16326; PF12848; PF01926; PF03266; PF00910; PF03193;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; AAA domain; P-loop containing region of AAA domain; AAA domain (dynein-related subfamily); ABC transporter; ABC transporter C-terminal domain; ABC transporter; 50S ribosome-binding GTPase; NTPase; RNA helicase; RsgA GTPase;
pfam_id AAA; AAA_16; AAA_21; AAA_22; AAA_23; AAA_29; AAA_5; ABC_tran; ABC_tran_CTD; ABC_tran_Xtn; MMR_HSR1; NTPase_1; RNA_helicase; RsgA_GTPase;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:3.7e-06 score:26.6 best_domain_score:12.5 name:AAA; db:Pfam-A.hmm|PF13191.6 evalue:6.9e-10 score:38.8 best_domain_score:21.2 name:AAA_16; db:Pfam-A.hmm|PF13304.6 evalue:9.2e-19 score:67.6 best_domain_score:16.9 name:AAA_21; db:Pfam-A.hmm|PF13401.6 evalue:6e-07 score:29.1 best_domain_score:13.1 name:AAA_22; db:Pfam-A.hmm|PF13476.6 evalue:8.3e-07 score:28.9 best_domain_score:15.9 name:AAA_23; db:Pfam-A.hmm|PF13555.6 evalue:1.5e-08 score:33.5 best_domain_score:18.0 name:AAA_29; db:Pfam-A.hmm|PF07728.14 evalue:7.5e-05 score:22.0 best_domain_score:11.0 name:AAA_5; db:Pfam-A.hmm|PF00005.27 evalue:3.8e-52 score:175.7 best_domain_score:86.7 name:ABC_tran; db:Pfam-A.hmm|PF16326.5 evalue:1.9e-16 score:59.3 best_domain_score:57.9 name:ABC_tran_CTD; db:Pfam-A.hmm|PF12848.7 evalue:1.3e-11 score:43.6 best_domain_score:43.6 name:ABC_tran_Xtn; db:Pfam-A.hmm|PF01926.23 evalue:7.1e-09 score:35.0 best_domain_score:16.6 name:MMR_HSR1; db:Pfam-A.hmm|PF03266.15 evalue:8.7e-06 score:25.0 best_domain_score:11.4 name:NTPase_1; db:Pfam-A.hmm|PF00910.22 evalue:1e-05 score:25.1 best_domain_score:13.4 name:RNA_helicase; db:Pfam-A.hmm|PF03193.16 evalue:1.3e-07 score:30.9 best_domain_score:17.0 name:RsgA_GTPase;
sprot_desc ABC transporter ATP-binding protein uup-1;
sprot_id sp|Q57242|UUP1_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57242|UUP1_HAEIN 1 625 evalue:1.6e-173 qcov:99.40 identity:50.90;
tigrfam_acc TIGR01189;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:9.3e-40 score:135.6 best_domain_score:68.3 name:TIGR01189;
84982 85371 CDS
ID metaerg.pl|06126
allec_ids 4.2.1.108;
allgo_ids GO:0019491; GO:0033990;
allko_ids K06720;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__UBA5105;s__UBA5105 sp002692965;
genomedb_acc GCA_002692965.1;
genomedb_target db:genomedb|GCA_002692965.1|MAL93569.1 1 129 evalue:5.1e-64 qcov:100.00 identity:87.60;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id P101-PWY;
metacyc_pathway_name ectoine biosynthesis;;
metacyc_pathway_type Polyamine-Biosynthesis;;
pfam_acc PF06339;
pfam_desc Ectoine synthase;
pfam_id Ectoine_synth;
pfam_target db:Pfam-A.hmm|PF06339.12 evalue:1.5e-53 score:179.6 best_domain_score:179.3 name:Ectoine_synth;
sprot_desc L-ectoine synthase;
sprot_id sp|Q0A9E8|ECTC_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0A9E8|ECTC_ALKEH 1 124 evalue:2.1e-40 qcov:96.10 identity:59.20;
85415 86644 CDS
ID metaerg.pl|06127
allgo_ids GO:0016021; GO:0055085; GO:0005887; GO:0042931;
allko_ids K08219; K08217; K08225;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000048.1_16 18 408 evalue:1.0e-142 qcov:95.60 identity:69.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF07690; PF05977;
pfam_desc Major Facilitator Superfamily; Transmembrane secretion effector;
pfam_id MFS_1; MFS_3;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:1e-18 score:66.6 best_domain_score:53.0 name:MFS_1; db:Pfam-A.hmm|PF05977.13 evalue:9.3e-22 score:76.3 best_domain_score:76.1 name:MFS_3;
sprot_desc Enterobactin exporter EntS;
sprot_id sp|A8AJL6|ENTS_CITK8;
sprot_target db:uniprot_sprot|sp|A8AJL6|ENTS_CITK8 45 409 evalue:6.5e-11 qcov:89.20 identity:26.30;
tm_num 10;
85415 86644 transmembrane_helix
ID metaerg.pl|06128
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology i85472-85540o85553-85621i85658-85726o85754-85822i85883-85951o86117-86185i86204-86272o86315-86383i86465-86533o86546-86614i;
87019 86678 CDS
ID metaerg.pl|06129
allgo_ids GO:0009055; GO:0019646;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A sulfidiphilus_A;
genomedb_acc GCF_000377945.1;
genomedb_target db:genomedb|GCF_000377945.1|WP_018952877.1 2 111 evalue:2.0e-16 qcov:97.30 identity:49.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF01355;
pfam_desc High potential iron-sulfur protein;
pfam_id HIPIP;
pfam_target db:Pfam-A.hmm|PF01355.17 evalue:8.5e-22 score:76.5 best_domain_score:76.2 name:HIPIP;
sp YES;
86678 86776 signal_peptide
ID metaerg.pl|06130
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
87178 87819 CDS
ID metaerg.pl|06131
allec_ids 4.2.1.1;
allgo_ids GO:0004089; GO:0008270; GO:0005829; GO:0015976;
allko_ids K01673;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Kiloniellales;f__Fodinicurvataceae;g__Fodinicurvata;s__Fodinicurvata sediminis;
genomedb_acc GCF_000420625.1;
genomedb_target db:genomedb|GCF_000420625.1|WP_022729739.1 4 210 evalue:2.4e-82 qcov:97.20 identity:68.60;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY-6142; CYANCAT-PWY; PWY-6146;
metacyc_pathway_name gluconeogenesis II (Methanobacterium thermoautotrophicum);; cyanate degradation;; Methanobacterium thermoautotrophicum biosynthetic metabolism;;
metacyc_pathway_type Gluconeogenesis; Super-Pathways;; Detoxification; NITROGEN-DEG;; Biosynthesis; Super-Pathways;;
pfam_acc PF00484;
pfam_desc Carbonic anhydrase;
pfam_id Pro_CA;
pfam_target db:Pfam-A.hmm|PF00484.19 evalue:4.2e-51 score:172.5 best_domain_score:172.3 name:Pro_CA;
sprot_desc Carbonic anhydrase 2;
sprot_id sp|P61517|CAN_ECOLI;
sprot_target db:uniprot_sprot|sp|P61517|CAN_ECOLI 1 192 evalue:3.2e-62 qcov:90.10 identity:55.20;
88742 87813 CDS
ID metaerg.pl|06132
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__Pseudohongiella;s__Pseudohongiella spirulinae;
genomedb_acc GCF_001444425.1;
genomedb_target db:genomedb|GCF_001444425.1|WP_058020342.1 14 309 evalue:6.2e-100 qcov:95.80 identity:66.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.2e-22 score:79.8 best_domain_score:44.5 name:EamA;
tm_num 9;
88742 87813 transmembrane_helix
ID metaerg.pl|06133
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology o87855-87923i87936-87995o88023-88091i88104-88172o88254-88322i88359-88427o88491-88559i88572-88640o88668-88724i;
89101 90237 CDS
ID metaerg.pl|06134
allec_ids 3.1.4.54;
allgo_ids GO:0005829; GO:0005769; GO:0031901; GO:0070062; GO:0005794; GO:0000139; GO:0043227; GO:0005635; GO:0005654; GO:0042622; GO:0042802; GO:0102200; GO:0070290; GO:0008270; GO:0007568; GO:0048874; GO:0070291; GO:0070292; GO:1903999; GO:0009395; GO:0090336; GO:0050729; GO:0035900; GO:0001523; GO:0001659;
allko_ids K13985;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalomonadales;f__Thiohalomonadaceae;g__Thiohalomonas;s__Thiohalomonas denitrificans;
genomedb_acc GCF_900102855.1;
genomedb_target db:genomedb|GCF_900102855.1|WP_092998879.1 15 354 evalue:3.1e-109 qcov:89.90 identity:53.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF12706; PF13483;
pfam_desc Beta-lactamase superfamily domain; Beta-lactamase superfamily domain;
pfam_id Lactamase_B_2; Lactamase_B_3;
pfam_target db:Pfam-A.hmm|PF12706.7 evalue:1e-36 score:125.6 best_domain_score:125.2 name:Lactamase_B_2; db:Pfam-A.hmm|PF13483.6 evalue:4.9e-13 score:48.5 best_domain_score:48.0 name:Lactamase_B_3;
sp YES;
sprot_desc N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D;
sprot_id sp|Q6IQ20|NAPEP_HUMAN;
sprot_target db:uniprot_sprot|sp|Q6IQ20|NAPEP_HUMAN 78 356 evalue:2.1e-51 qcov:73.80 identity:38.90;
89101 89178 lipoprotein_signal_peptide
ID metaerg.pl|06135
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
90251 90736 CDS
ID metaerg.pl|06136
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Algiphilaceae;g__Algiphilus;s__Algiphilus aromaticivorans;
genomedb_acc GCF_000733765.1;
genomedb_target db:genomedb|GCF_000733765.1|WP_084191560.1 4 161 evalue:1.3e-53 qcov:98.10 identity:64.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF06172;
pfam_desc Cupin superfamily (DUF985);
pfam_id Cupin_5;
pfam_target db:Pfam-A.hmm|PF06172.11 evalue:2.4e-44 score:150.1 best_domain_score:149.9 name:Cupin_5;
90733 91068 CDS
ID metaerg.pl|06137
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Neptuniibacter;s__Neptuniibacter caesariensis;
genomedb_acc GCA_000153345.1;
genomedb_target db:genomedb|GCA_000153345.1|EAR61932.1 1 105 evalue:7.9e-21 qcov:94.60 identity:43.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF11743;
pfam_desc Protein of unknown function (DUF3301);
pfam_id DUF3301;
pfam_target db:Pfam-A.hmm|PF11743.8 evalue:7.7e-31 score:104.9 best_domain_score:104.7 name:DUF3301;
tm_num 1;
90733 91068 transmembrane_helix
ID metaerg.pl|06138
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
topology o90745-90813i;
92123 91026 CDS
ID metaerg.pl|06139
allgo_ids GO:0003700; GO:0006355; GO:0043565;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000012.1_20 11 352 evalue:5.8e-113 qcov:93.70 identity:60.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF12625; PF12833; PF00165;
pfam_desc Arabinose-binding domain of AraC transcription regulator, N-term; Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id Arabinose_bd; HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF12625.7 evalue:1.7e-22 score:79.7 best_domain_score:78.9 name:Arabinose_bd; db:Pfam-A.hmm|PF12833.7 evalue:1.1e-17 score:63.2 best_domain_score:63.2 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:6.7e-10 score:38.1 best_domain_score:33.6 name:HTH_AraC;
93928 92201 CDS
ID metaerg.pl|06140
allec_ids 2.7.7.7; 3.1.11.1;
allgo_ids GO:0003824; GO:0003677; GO:0003887; GO:0008852; GO:0046872; GO:0006281; GO:0006260;
allko_ids K04486; K02347;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A thiocyanodenitrificans;
genomedb_acc GCF_000378965.1;
genomedb_target db:genomedb|GCF_000378965.1|WP_018231035.1 1 575 evalue:5.2e-201 qcov:100.00 identity:63.80;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF14791; PF14520; PF14716; PF02811;
pfam_desc DNA polymerase beta thumb ; Helix-hairpin-helix domain; Helix-hairpin-helix domain; PHP domain;
pfam_id DNA_pol_B_thumb; HHH_5; HHH_8; PHP;
pfam_target db:Pfam-A.hmm|PF14791.6 evalue:1.2e-19 score:69.5 best_domain_score:68.2 name:DNA_pol_B_thumb; db:Pfam-A.hmm|PF14520.6 evalue:8.8e-08 score:31.9 best_domain_score:24.2 name:HHH_5; db:Pfam-A.hmm|PF14716.6 evalue:2e-18 score:65.7 best_domain_score:62.9 name:HHH_8; db:Pfam-A.hmm|PF02811.19 evalue:9.4e-08 score:31.8 best_domain_score:29.3 name:PHP;
sprot_desc DNA polymerase/3'-5' exonuclease PolX;
sprot_id sp|P94544|POLX_BACSU;
sprot_target db:uniprot_sprot|sp|P94544|POLX_BACSU 3 574 evalue:1.4e-99 qcov:99.50 identity:37.20;
94699 93941 CDS
ID metaerg.pl|06141
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Desulfobaccia;o__Desulfobaccales;f__Desulfobaccaceae;g__Desulfobacca_B;s__Desulfobacca_B sp002049795;
genomedb_acc GCA_002049795.1;
genomedb_target db:genomedb|GCA_002049795.1|OPX19094.1 8 249 evalue:4.0e-81 qcov:96.00 identity:58.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF01904;
pfam_desc Protein of unknown function DUF72;
pfam_id DUF72;
pfam_target db:Pfam-A.hmm|PF01904.18 evalue:6.1e-68 score:228.4 best_domain_score:228.2 name:DUF72;
94822 95838 CDS
ID metaerg.pl|06142
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114;
allko_ids K00356; K01897; K00329; K00143; K03953; K02364;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Ensifer;s__Ensifer adhaerens_E;
genomedb_acc GCF_002940685.1;
genomedb_target db:genomedb|GCF_002940685.1|WP_104663288.1 2 319 evalue:2.4e-44 qcov:94.10 identity:36.70;
kegg_pathway_id 00300; 00190; 00130; 05012; 01053; 00071; 00310;
kegg_pathway_name Lysine biosynthesis; Oxidative phosphorylation; Ubiquinone biosynthesis; Parkinson's disease; Biosynthesis of siderophore group nonribosomal peptides; Fatty acid metabolism; Lysine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF01073; PF01370; PF16363; PF13460; PF07993; PF05368; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; NAD(P)H-binding ; Male sterility protein; NmrA-like family; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; NAD_binding_10; NAD_binding_4; NmrA; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:4.9e-28 score:97.2 best_domain_score:96.9 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:2e-24 score:85.6 best_domain_score:85.3 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:1.5e-09 score:36.9 best_domain_score:34.1 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF13460.6 evalue:4.9e-18 score:64.9 best_domain_score:64.2 name:NAD_binding_10; db:Pfam-A.hmm|PF07993.12 evalue:6e-15 score:54.3 best_domain_score:27.6 name:NAD_binding_4; db:Pfam-A.hmm|PF05368.13 evalue:1.2e-06 score:27.5 best_domain_score:27.0 name:NmrA; db:Pfam-A.hmm|PF04321.17 evalue:8.3e-11 score:40.7 best_domain_score:40.3 name:RmlD_sub_bind;
96830 95850 CDS
ID metaerg.pl|06143
allec_ids 1.1.1.169;
allgo_ids GO:0005737; GO:0008677; GO:0015940;
allko_ids K00077;
genomedb_OC d__Archaea;p__Halobacterota;c__Methanocellia;o__Methanocellales;f__Methanocellaceae;g__Methanocella;s__Methanocella paludicola;
genomedb_acc GCA_000011005.1;
genomedb_target db:genomedb|GCA_000011005.1|BAI62732.1 1 300 evalue:1.1e-14 qcov:92.00 identity:29.50;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY-4221; PANTOSYN-PWY; PANTO-PWY;
metacyc_pathway_name superpathway of coenzyme A biosynthesis II (plants);; superpathway of coenzyme A biosynthesis I (bacteria);; phosphopantothenate biosynthesis I;;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; Pantothenate-Biosynthesis;;
pfam_acc PF02558; PF08546;
pfam_desc Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal;
pfam_id ApbA; ApbA_C;
pfam_target db:Pfam-A.hmm|PF02558.16 evalue:3e-06 score:26.2 best_domain_score:24.3 name:ApbA; db:Pfam-A.hmm|PF08546.11 evalue:1.5e-22 score:79.4 best_domain_score:78.9 name:ApbA_C;
sprot_desc Putative 2-dehydropantoate 2-reductase;
sprot_id sp|Q9ABG6|PANE_CAUVC;
sprot_target db:uniprot_sprot|sp|Q9ABG6|PANE_CAUVC 5 292 evalue:7.1e-08 qcov:88.30 identity:26.50;
97074 98603 CDS
ID metaerg.pl|06144
allec_ids 1.14.13.-;
allgo_ids GO:0004499; GO:0050660; GO:0050661; GO:0055114; GO:0005886;
allko_ids K10215;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000012.1_19 3 508 evalue:6.0e-225 qcov:99.40 identity:70.90;
kegg_pathway_id 00632;
kegg_pathway_name Benzoate degradation via CoA ligation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id TOLUENE-DEG-2-OH-PWY; PWY-5168; HISHP-PWY; P601-PWY; PWY-5180; PWY-6544; PWY-5195; P421-PWY; PWY-5469; TOLUENE-DEG-4-OH-PWY; PWY-2821; PWY-5181; PWY-321; PWY-5529; PWY-5479; PWY-5701; PWY-5203; HCAMHPDEG-PWY; PWYQT-4472; TOLUENE-DEG-3-OH-PWY; PWY-5773; PWY-3022; PWYQT-4475; PWY-2582; PWY-5531; PWY-5991; PWY-5473; CAMALEXIN-SYN; PWY-5161; M-CRESOL-DEGRADATION-PWY; PWY-601; PWY-1187; PWYQT-4474; PWY-5990; PWYQT-4473; PWY-6014; PWY-681; PWY-6526; PWY-5992; PWY-5183; PWY-5061; PWYQT-4471; PWY-6197; PWY-699; PWY-6059;
metacyc_pathway_name toluene degradation to 2-hydroxypentadienoate I (via o-cresol);; ferulate and sinapate biosynthesis;; L-histidine degradation VI;; (+)-camphor degradation;; toluene degradation I (aerobic) (via o-cresol);; superpathway of C28 brassinosteroid biosynthesis;; artemisinin and arteannuin B biosynthesis;; 4-nitrotoluene degradation I;; sesamin biosynthesis;; toluene degradation to 4-methylphenol;; glucosinolate biosynthesis from phenylalanine;; toluene degradation III (aerobic) (via p-cresol);; cutin biosynthesis;; superpathway of bacteriochlorophyll a biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; shikonin biosynthesis;; soybean saponin I biosynthesis;; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; glucosinolate biosynthesis from trihomomethionine;; toluene degradation to 2-hydroxypentadienoate (via 4-methylcatechol);; gossypol biosynthesis;; linamarin biosynthesis;; glucosinolate biosynthesis from hexahomomethionine;; brassinosteroid biosynthesis II;; 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; superpathway of linamarin and lotaustralin biosynthesis;; hydroxycinnamic acid serotonin amides biosynthesis;; camalexin biosynthesis;; 6'-deoxychalcone metabolism;; m-cresol degradation;; glucosinolate biosynthesis from tryptophan;; glucosinolate biosynthesis from homomethionine;; glucosinolate biosynthesis from pentahomomethionine;; lotaustralin biosynthesis;; glucosinolate biosynthesis from tetrahomomethionine;; vernolate biosynthesis I;; dibenzothiophene desulfurization;; limonene degradation III (to perillate);; thalianol and derivatives biosynthesis;; superpathway of aerobic toluene degradation;; 6,7,4'-trihydroxyisoflavone biosynthesis;; glucosinolate biosynthesis from dihomomethionine;; chlorinated phenols degradation;; brassinosteroid biosynthesis I;; dimethyl sulfide degradation II (oxidation);;
metacyc_pathway_type TOLUENE-DEG;; CINNAMATE-SYN;; HISTIDINE-DEG;; Camphor-Degradation;; Super-Pathways; TOLUENE-DEG;; Super-Pathways;; SESQUITERPENE-LACTONE;; 4-Nitrotoluene-Degradation;; LIGNAN-SYN;; TOLUENE-DEG;; GLUCOSINOLATE-SYN;; Super-Pathways; TOLUENE-DEG;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; TRITERPENOID-SYN;; Phenolic-Compounds-Degradation;; GLUCOSINOLATE-SYN;; TOLUENE-DEG;; SESQUITERPENOID-SYN;; CYANOGENIC-GLUCOSIDE-SYN;; GLUCOSINOLATE-SYN;; Brassinosteroid-Biosynthesis;; Chlorophyllide-a-Biosynthesis;; Super-Pathways;; N-CONTAINING-SECONDARY-CMPD-SYN;; INDOLE-PHYTOALEXIN-SYN;; CHALCONE-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;; GLUCOSINOLATE-SYN;; GLUCOSINOLATE-SYN;; GLUCOSINOLATE-SYN;; CYANOGENIC-GLUCOSIDE-SYN;; GLUCOSINOLATE-SYN;; Vernolate-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Limonene-Degradation;; TRITERPENOID-SYN;; Super-Pathways; TOLUENE-DEG;; ISOFLAVONOID-SYN;; GLUCOSINOLATE-SYN;; Chloroaromatic-Compounds-Degradation;; Brassinosteroid-Biosynthesis;; Dimethylsulfide-Degradation;;
pfam_acc PF00743; PF13434; PF13450; PF07992;
pfam_desc Flavin-binding monooxygenase-like; L-lysine 6-monooxygenase (NADPH-requiring); NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id FMO-like; K_oxygenase; NAD_binding_8; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF00743.19 evalue:5.4e-12 score:44.1 best_domain_score:37.6 name:FMO-like; db:Pfam-A.hmm|PF13434.6 evalue:1.6e-09 score:36.6 best_domain_score:20.8 name:K_oxygenase; db:Pfam-A.hmm|PF13450.6 evalue:7.1e-10 score:38.2 best_domain_score:31.4 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:1.7e-06 score:26.7 best_domain_score:18.0 name:Pyr_redox_2;
sprot_desc FAD-containing monooxygenase EthA;
sprot_id sp|Q7TVI2|ETHA_MYCBO;
sprot_target db:uniprot_sprot|sp|Q7TVI2|ETHA_MYCBO 16 502 evalue:2.4e-132 qcov:95.70 identity:47.90;
99050 98610 CDS
ID metaerg.pl|06145
allec_ids 3.5.4.1;
allgo_ids GO:0002100; GO:0008251; GO:0102480; GO:0004131; GO:0008270; GO:0019858; GO:0044206;
allko_ids K01485;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Methylophilaceae;g__Novimethylophilus;s__Novimethylophilus kurashikiensis;
genomedb_acc GCF_003112435.1;
genomedb_target db:genomedb|GCF_003112435.1|WP_109014775.1 3 145 evalue:2.4e-54 qcov:97.90 identity:74.80;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY0-163;
metacyc_pathway_name ;
metacyc_pathway_type ;
pfam_acc PF00383; PF14437;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase;
pfam_id dCMP_cyt_deam_1; MafB19-deam;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:8.5e-21 score:73.0 best_domain_score:72.5 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:2.5e-18 score:65.4 best_domain_score:65.2 name:MafB19-deam;
sprot_desc Cytosine deaminase;
sprot_id sp|P78594|FCA1_CANAX;
sprot_target db:uniprot_sprot|sp|P78594|FCA1_CANAX 6 145 evalue:1.0e-35 qcov:95.90 identity:51.80;
99150 99749 CDS
ID metaerg.pl|06146
allec_ids 1.6.5.2;
allgo_ids GO:0010181; GO:0050660; GO:0051287; GO:0003955; GO:0050661;
allko_ids K03809;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Ectothiorhodospira;s__Ectothiorhodospira marina;
genomedb_acc GCF_900109495.1;
genomedb_target db:genomedb|GCF_900109495.1|WP_090254019.1 1 199 evalue:1.7e-82 qcov:100.00 identity:77.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF00258; PF03358;
pfam_desc Flavodoxin; NADPH-dependent FMN reductase;
pfam_id Flavodoxin_1; FMN_red;
pfam_target db:Pfam-A.hmm|PF00258.25 evalue:2.5e-06 score:27.0 best_domain_score:21.5 name:Flavodoxin_1; db:Pfam-A.hmm|PF03358.15 evalue:3.8e-11 score:42.2 best_domain_score:41.7 name:FMN_red;
sprot_desc NAD(P)H dehydrogenase (quinone);
sprot_id sp|C1DFX8|NQOR_AZOVD;
sprot_target db:uniprot_sprot|sp|C1DFX8|NQOR_AZOVD 1 197 evalue:2.0e-77 qcov:99.00 identity:72.60;
tigrfam_acc TIGR01755;
tigrfam_desc NAD(P)H:quinone oxidoreductase, type IV;
tigrfam_mainrole Energy metabolism;
tigrfam_name flav_wrbA;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01755 evalue:7.9e-94 score:312.3 best_domain_score:312.2 name:TIGR01755;
99785 100255 CDS
ID metaerg.pl|06147
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000002.1_37 2 156 evalue:1.1e-31 qcov:99.40 identity:46.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
pfam_acc PF01243;
pfam_desc Pyridoxamine 5'-phosphate oxidase;
pfam_id Putative_PNPOx;
pfam_target db:Pfam-A.hmm|PF01243.20 evalue:3.1e-11 score:42.5 best_domain_score:42.0 name:Putative_PNPOx;
100545 100865 CDS
ID metaerg.pl|06148
allec_ids 3.1.4.46;
allgo_ids GO:0006629; GO:0008081; GO:0042597; GO:0005509; GO:0008889; GO:0046872; GO:0006071;
allko_ids K01126;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Stappiaceae;g__Pannonibacter;s__Pannonibacter phragmitetus;
genomedb_acc GCF_000382365.1;
genomedb_target db:genomedb|GCF_000382365.1|WP_019964450.1 13 107 evalue:1.1e-27 qcov:88.80 identity:66.30;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
metacyc_pathway_id PWY0-381;
metacyc_pathway_name glycerol and glycerophosphodiester degradation;;
metacyc_pathway_type GLYCEROL-DEG; Super-Pathways;;
pfam_acc PF03009;
pfam_desc Glycerophosphoryl diester phosphodiesterase family;
pfam_id GDPD;
pfam_target db:Pfam-A.hmm|PF03009.17 evalue:5e-22 score:78.1 best_domain_score:77.9 name:GDPD;
sp YES;
sprot_desc Glycerophosphodiester phosphodiesterase, periplasmic;
sprot_id sp|P09394|GLPQ_ECOLI;
sprot_target db:uniprot_sprot|sp|P09394|GLPQ_ECOLI 23 106 evalue:3.3e-23 qcov:78.50 identity:60.70;
100545 100610 signal_peptide
ID metaerg.pl|06149
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0262418; 13.7606; 0.145805; 0.268058; 13.3205;
>Feature NODE_38_length_100134_cov_22.8811
3 278 CDS
ID metaerg.pl|06150
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF05065;
pfam_desc Phage capsid family;
pfam_id Phage_capsid;
pfam_target db:Pfam-A.hmm|PF05065.13 evalue:9.7e-06 score:24.3 best_domain_score:24.0 name:Phage_capsid;
1325 603 CDS
ID metaerg.pl|06151
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Variovorax;s__Variovorax sp900106655;
genomedb_acc GCF_900106655.1;
genomedb_target db:genomedb|GCF_900106655.1|WP_093059414.1 7 194 evalue:6.9e-14 qcov:78.30 identity:28.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
2039 4075 CDS
ID metaerg.pl|06152
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A sulfidiphilus_A;
genomedb_acc GCF_000377945.1;
genomedb_target db:genomedb|GCF_000377945.1|WP_018954749.1 13 678 evalue:9.4e-258 qcov:98.20 identity:66.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF05787;
pfam_desc Bacterial protein of unknown function (DUF839);
pfam_id DUF839;
pfam_target db:Pfam-A.hmm|PF05787.13 evalue:2.1e-166 score:554.4 best_domain_score:554.2 name:DUF839;
sp YES;
2039 2218 signal_peptide
ID metaerg.pl|06153
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
5270 4125 CDS
ID metaerg.pl|06154
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sp002901215;
genomedb_acc GCF_002901215.1;
genomedb_target db:genomedb|GCF_002901215.1|WP_103173084.1 62 372 evalue:1.9e-26 qcov:81.60 identity:32.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:4.7e-42 score:143.5 best_domain_score:143.1 name:AI-2E_transport;
tm_num 7;
5270 4125 transmembrane_helix
ID metaerg.pl|06155
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology o4242-4295i4314-4382o4392-4460i4641-4709o4818-4886i4899-4967o5124-5192i;
7899 5812 CDS
ID metaerg.pl|06156
allko_ids K03332;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatimonas;s__Gemmatimonas sp002483225;
genomedb_acc GCA_002483225.1;
genomedb_target db:genomedb|GCA_002483225.1|DLHL01000045.1_16 52 692 evalue:5.3e-232 qcov:92.20 identity:60.80;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF02368; PF08309;
pfam_desc Bacterial Ig-like domain (group 2); LVIVD repeat;
pfam_id Big_2; LVIVD;
pfam_target db:Pfam-A.hmm|PF02368.18 evalue:1.1e-09 score:37.3 best_domain_score:36.3 name:Big_2; db:Pfam-A.hmm|PF08309.11 evalue:3.8e-14 score:51.0 best_domain_score:16.6 name:LVIVD;
sp YES;
5812 5904 signal_peptide
ID metaerg.pl|06157
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
8018 9397 CDS
ID metaerg.pl|06158
allko_ids K15864; K00368;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__UBA7656;f__UBA7656;g__QHVH01;s__QHVH01 sp003222245;
genomedb_acc GCA_003222245.1;
genomedb_target db:genomedb|GCA_003222245.1|PYP84197.1 91 459 evalue:1.5e-110 qcov:80.40 identity:54.60;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF02239; PF10282; PF13570;
pfam_desc Cytochrome D1 heme domain; Lactonase, 7-bladed beta-propeller; PQQ-like domain;
pfam_id Cytochrom_D1; Lactonase; PQQ_3;
pfam_target db:Pfam-A.hmm|PF02239.16 evalue:1e-07 score:30.0 best_domain_score:12.6 name:Cytochrom_D1; db:Pfam-A.hmm|PF10282.9 evalue:2.7e-06 score:26.1 best_domain_score:12.6 name:Lactonase; db:Pfam-A.hmm|PF13570.6 evalue:4.3e-05 score:23.1 best_domain_score:11.2 name:PQQ_3;
sp YES;
8018 8173 signal_peptide
ID metaerg.pl|06159
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
9840 9580 CDS
ID metaerg.pl|06160
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfocapsaceae;g__Tol-SR;s__Tol-SR sp000769715;
genomedb_acc GCA_000769715.1;
genomedb_target db:genomedb|GCA_000769715.1|KGO32709.1 5 83 evalue:3.6e-13 qcov:91.90 identity:46.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00550;
pfam_desc Phosphopantetheine attachment site;
pfam_id PP-binding;
pfam_target db:Pfam-A.hmm|PF00550.25 evalue:1.2e-11 score:44.0 best_domain_score:43.9 name:PP-binding;
11030 9837 CDS
ID metaerg.pl|06161
allec_ids 2.3.1.168;
allgo_ids GO:0016746; GO:0005737; GO:0016407; GO:0043754; GO:0031405; GO:0006096;
allko_ids K09699; K11381; K00658; K00162; K00163; K00382;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Notoacmeibacter;s__Notoacmeibacter sp002727065;
genomedb_acc GCF_002727065.1;
genomedb_target db:genomedb|GCF_002727065.1|WP_099307472.1 5 397 evalue:9.5e-101 qcov:99.00 identity:51.20;
kegg_pathway_id 00620; 00252; 00650; 00290; 00010; 00310; 00280; 00020; 00260;
kegg_pathway_name Pyruvate metabolism; Alanine and aspartate metabolism; Butanoate metabolism; Valine, leucine and isoleucine biosynthesis; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine degradation; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id PWY-5046;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF00198; PF00364; PF02817;
pfam_desc 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme; e3 binding domain;
pfam_id 2-oxoacid_dh; Biotin_lipoyl; E3_binding;
pfam_target db:Pfam-A.hmm|PF00198.23 evalue:2.8e-54 score:183.3 best_domain_score:182.8 name:2-oxoacid_dh; db:Pfam-A.hmm|PF00364.22 evalue:5.2e-12 score:44.7 best_domain_score:44.1 name:Biotin_lipoyl; db:Pfam-A.hmm|PF02817.17 evalue:4.3e-11 score:42.2 best_domain_score:41.5 name:E3_binding;
sprot_desc Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex;
sprot_id sp|Q9I1M0|ODB2_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I1M0|ODB2_PSEAE 7 397 evalue:1.2e-33 qcov:98.50 identity:28.50;
12016 11027 CDS
ID metaerg.pl|06162
allec_ids 1.2.4.1;
allgo_ids GO:0048046; GO:0005759; GO:0005739; GO:0005730; GO:0005774; GO:0004739; GO:0006086; GO:0042742; GO:0006096;
allko_ids K00167; K00615; K00162; K11381; K00161;
genomedb_OC d__Bacteria;p__Binatota;c__Binatia;o__UBA9968;f__UBA9968;g__2-12-FULL-60-19;s__2-12-FULL-60-19 sp001798595;
genomedb_acc GCA_001798595.1;
genomedb_target db:genomedb|GCA_001798595.1|OGQ78571.1 1 326 evalue:1.3e-140 qcov:99.10 identity:75.80;
kegg_pathway_id 00290; 00280; 00710; 00030; 00010; 00020; 00252; 01051; 00620; 00650;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Carbon fixation in photosynthetic organisms; Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Alanine and aspartate metabolism; Biosynthesis of ansamycins; Pyruvate metabolism; Butanoate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id PWY-5173; PYRUVDEHYD-PWY; PWY-5464;
metacyc_pathway_name superpathway of acetyl-CoA biosynthesis;; pyruvate decarboxylation to acetyl CoA;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF02780; PF02779;
pfam_desc Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain;
pfam_id Transketolase_C; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF02780.20 evalue:5.9e-40 score:135.2 best_domain_score:134.1 name:Transketolase_C; db:Pfam-A.hmm|PF02779.24 evalue:4.2e-40 score:136.5 best_domain_score:136.1 name:Transket_pyr;
sprot_desc Pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial;
sprot_id sp|Q38799|ODPB1_ARATH;
sprot_target db:uniprot_sprot|sp|Q38799|ODPB1_ARATH 4 317 evalue:1.0e-86 qcov:95.40 identity:50.30;
13011 12013 CDS
ID metaerg.pl|06163
allec_ids 1.2.4.1;
allgo_ids GO:0016624; GO:0043231; GO:0004739; GO:0006086; GO:0006096;
allko_ids K00162; K00161; K00166; K11381;
genomedb_OC d__Bacteria;p__Binatota;c__Binatia;o__UBA9968;f__UBA9968;g__2-12-FULL-60-19;s__2-12-FULL-60-19 sp001798595;
genomedb_acc GCA_001798595.1;
genomedb_target db:genomedb|GCA_001798595.1|OGQ78572.1 6 327 evalue:1.7e-127 qcov:97.00 identity:69.60;
kegg_pathway_id 00252; 00290; 00620; 00280; 00010; 00020; 00650;
kegg_pathway_name Alanine and aspartate metabolism; Valine, leucine and isoleucine biosynthesis; Pyruvate metabolism; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Butanoate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id PWY-5464; PWY-5173; PYRUVDEHYD-PWY;
metacyc_pathway_name superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of acetyl-CoA biosynthesis;; pyruvate decarboxylation to acetyl CoA;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Acetyl-CoA-Biosynthesis; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;;
pfam_acc PF00676; PF02775;
pfam_desc Dehydrogenase E1 component; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain;
pfam_id E1_dh; TPP_enzyme_C;
pfam_target db:Pfam-A.hmm|PF00676.20 evalue:1.1e-89 score:299.6 best_domain_score:299.5 name:E1_dh; db:Pfam-A.hmm|PF02775.21 evalue:5.5e-05 score:22.2 best_domain_score:18.8 name:TPP_enzyme_C;
sprot_desc Pyruvate dehydrogenase E1 component subunit alpha;
sprot_id sp|O66112|ODPA_ZYMMO;
sprot_target db:uniprot_sprot|sp|O66112|ODPA_ZYMMO 7 320 evalue:3.4e-74 qcov:94.60 identity:47.40;
tigrfam_acc TIGR03182;
tigrfam_desc pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name PDH_E1_alph_y;
tigrfam_sub1role Pyruvate dehydrogenase;
tigrfam_target db:TIGRFAMs.hmm|TIGR03182 evalue:1.4e-135 score:450.4 best_domain_score:450.2 name:TIGR03182;
14732 13008 CDS
ID metaerg.pl|06164
allec_ids 6.2.1.1;
allgo_ids GO:0003824; GO:0003987; GO:0005524; GO:0046872;
allko_ids K01779; K00992; K02364; K05939; K14467; K01586; K00143; K03367; K01776; K01897; K01652; K01909; K01904; K01895;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium pentaromativorans;
genomedb_acc GCF_000767465.1;
genomedb_target db:genomedb|GCF_000767465.1|WP_052117803.1 7 571 evalue:3.6e-226 qcov:98.40 identity:67.30;
kegg_pathway_id 00290; 00310; 00010; 00564; 01053; 00770; 00252; 00251; 00473; 00071; 00660; 00471; 00720; 00940; 00620; 00300; 00650; 00640;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Lysine degradation; Glycolysis / Gluconeogenesis; Glycerophospholipid metabolism; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Alanine and aspartate metabolism; Glutamate metabolism; D-Alanine metabolism; Fatty acid metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis; Pyruvate metabolism; Lysine biosynthesis; Butanoate metabolism; Propanoate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id PWY66-161; PWY66-162; PWY0-1313; PWY66-21; GLUDEG-II-PWY; ACETATEUTIL-PWY;
metacyc_pathway_name ethanol degradation III;; ethanol degradation IV;; acetate conversion to acetyl-CoA;; ethanol degradation II;; L-glutamate degradation VII (to butanoate);; superpathway of acetate utilization and formation;;
metacyc_pathway_type Ethanol-Degradation;; Ethanol-Degradation;; CARBOXYLATES-DEG;; Ethanol-Degradation;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:1.2e-87 score:293.4 best_domain_score:293.2 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:2.8e-25 score:88.3 best_domain_score:86.7 name:AMP-binding_C;
sprot_desc Acetyl-coenzyme A synthetase;
sprot_id sp|P39062|ACSA_BACSU;
sprot_target db:uniprot_sprot|sp|P39062|ACSA_BACSU 30 572 evalue:5.7e-138 qcov:94.60 identity:46.70;
15781 14858 CDS
ID metaerg.pl|06165
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91213.1 1 303 evalue:2.0e-37 qcov:98.70 identity:39.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.3e-47 score:161.1 best_domain_score:93.6 name:Usp;
16154 18565 CDS
ID metaerg.pl|06166
allec_ids 2.7.9.2;
allgo_ids GO:0016310; GO:0016772; GO:0005524; GO:0046872; GO:0008986; GO:0006094; GO:0006090;
allko_ids K11189; K02794; K11201; K02793; K11183; K01007; K02744; K02821; K02806; K02812; K00873; K08483; K01006; K08484; K02768;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Streptosporangium;s__Streptosporangium amethystogenes;
genomedb_acc GCF_000721075.1;
genomedb_target db:genomedb|GCF_000721075.1|WP_030921889.1 13 795 evalue:3.0e-279 qcov:97.50 identity:61.90;
kegg_pathway_id 00010; 00710; 00720; 02060; 00620; 00230;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Reductive carboxylate cycle (CO2 fixation); Phosphotransferase system (PTS); Pyruvate metabolism; Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id GLYCOLYSIS; GLYCOLYSIS-E-D; PWY-5484; P461-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; P23-PWY; P441-PWY; GLUCONEO-PWY; ANAEROFRUCAT-PWY;
metacyc_pathway_name glycolysis I (from glucose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; reductive TCA cycle I;; superpathway of N-acetylneuraminate degradation;; gluconeogenesis I;; homolactic fermentation;;
metacyc_pathway_type GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; CARBOXYLATES-DEG; Super-Pathways;; Gluconeogenesis;; Fermentation-to-Lactate; Super-Pathways;;
pfam_acc PF00391; PF02896; PF01326;
pfam_desc PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain;
pfam_id PEP-utilizers; PEP-utilizers_C; PPDK_N;
pfam_target db:Pfam-A.hmm|PF00391.23 evalue:1e-23 score:82.1 best_domain_score:80.6 name:PEP-utilizers; db:Pfam-A.hmm|PF02896.18 evalue:7.5e-60 score:201.7 best_domain_score:200.4 name:PEP-utilizers_C; db:Pfam-A.hmm|PF01326.19 evalue:8.6e-105 score:349.8 best_domain_score:349.3 name:PPDK_N;
sprot_desc Phosphoenolpyruvate synthase;
sprot_id sp|Q55905|PPSA_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55905|PPSA_SYNY3 9 799 evalue:4.7e-239 qcov:98.50 identity:53.70;
tigrfam_acc TIGR01418;
tigrfam_desc phosphoenolpyruvate synthase;
tigrfam_mainrole Energy metabolism;
tigrfam_name PEP_synth;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01418 evalue:0 score:1053.5 best_domain_score:1053.3 name:TIGR01418;
18570 20492 CDS
ID metaerg.pl|06167
allec_ids 3.4.24.-;
allgo_ids GO:0005524; GO:0016021; GO:0005886; GO:0016887; GO:0004222; GO:0008270; GO:0030163;
allko_ids K07767; K13254; K00733; K02343; K02341; K01509; K03798;
genomedb_OC d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__GWA2-73-35;g__AR37;s__AR37 sp003220345;
genomedb_acc GCA_003220345.1;
genomedb_target db:genomedb|GCA_003220345.1|PYM54642.1 28 625 evalue:1.4e-170 qcov:93.40 identity:53.50;
kegg_pathway_id 00230; 03030; 01030;
kegg_pathway_name Purine metabolism; DNA replication; Glycan structures - biosynthesis 1;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00004; PF07724; PF07728; PF17862; PF01434;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); AAA domain (dynein-related subfamily); AAA+ lid domain; Peptidase family M41;
pfam_id AAA; AAA_2; AAA_5; AAA_lid_3; Peptidase_M41;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:4.9e-42 score:142.7 best_domain_score:141.0 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:7.1e-05 score:22.2 best_domain_score:21.0 name:AAA_2; db:Pfam-A.hmm|PF07728.14 evalue:2e-07 score:30.3 best_domain_score:26.6 name:AAA_5; db:Pfam-A.hmm|PF17862.1 evalue:1.8e-12 score:46.1 best_domain_score:46.1 name:AAA_lid_3; db:Pfam-A.hmm|PF01434.18 evalue:5.8e-58 score:195.1 best_domain_score:194.4 name:Peptidase_M41;
sprot_desc ATP-dependent zinc metalloprotease FtsH;
sprot_id sp|B8J992|FTSH_ANAD2;
sprot_target db:uniprot_sprot|sp|B8J992|FTSH_ANAD2 89 631 evalue:8.9e-156 qcov:84.80 identity:56.70;
tigrfam_acc TIGR01241;
tigrfam_desc ATP-dependent metallopeptidase HflB;
tigrfam_mainrole Protein fate;
tigrfam_name FtsH_fam;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01241 evalue:1.1e-202 score:673.4 best_domain_score:673.0 name:TIGR01241;
tm_num 2;
18570 20492 transmembrane_helix
ID metaerg.pl|06168
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology o18648-18716i18957-19025o;
20605 23274 CDS
ID metaerg.pl|06169
allec_ids 3.4.14.5;
allgo_ids GO:0016787; GO:0016021; GO:0005774; GO:0004177; GO:0008236;
allko_ids K01303; K01730; K01282;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000046.1_6 2 882 evalue:0.0e+00 qcov:99.10 identity:66.80;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF01738; PF00930; PF12146; PF07676; PF00326;
pfam_desc Dienelactone hydrolase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; Serine aminopeptidase, S33; WD40-like Beta Propeller Repeat; Prolyl oligopeptidase family;
pfam_id DLH; DPPIV_N; Hydrolase_4; PD40; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF01738.18 evalue:2.6e-05 score:23.1 best_domain_score:21.5 name:DLH; db:Pfam-A.hmm|PF00930.21 evalue:1.1e-46 score:158.5 best_domain_score:149.5 name:DPPIV_N; db:Pfam-A.hmm|PF12146.8 evalue:9.5e-07 score:27.5 best_domain_score:20.3 name:Hydrolase_4; db:Pfam-A.hmm|PF07676.12 evalue:1.1e-06 score:27.7 best_domain_score:17.6 name:PD40; db:Pfam-A.hmm|PF00326.21 evalue:2.4e-31 score:108.1 best_domain_score:106.9 name:Peptidase_S9;
sp YES;
sprot_desc Probable dipeptidyl-aminopeptidase B;
sprot_id sp|A6SL49|DAPB_BOTFB;
sprot_target db:uniprot_sprot|sp|A6SL49|DAPB_BOTFB 205 844 evalue:4.1e-18 qcov:72.00 identity:22.90;
20605 20703 signal_peptide
ID metaerg.pl|06170
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
24685 23477 CDS
ID metaerg.pl|06171
allgo_ids GO:0030288; GO:0016491;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91569.1 40 400 evalue:4.9e-145 qcov:89.80 identity:66.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF07995;
pfam_desc Glucose / Sorbosone dehydrogenase;
pfam_id GSDH;
pfam_target db:Pfam-A.hmm|PF07995.11 evalue:1.4e-129 score:431.4 best_domain_score:431.2 name:GSDH;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P73001|Y1608_SYNY3;
sprot_target db:uniprot_sprot|sp|P73001|Y1608_SYNY3 28 398 evalue:7.7e-89 qcov:92.30 identity:45.20;
23477 23554 lipoprotein_signal_peptide
ID metaerg.pl|06172
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
26202 24784 CDS
ID metaerg.pl|06173
allec_ids 1.4.1.3;
allgo_ids GO:0006520; GO:0016491; GO:0055114; GO:0031012; GO:0005759; GO:0005739; GO:0045335; GO:0005524; GO:0004353; GO:0006538;
allko_ids K00260; K00262; K00261;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__MEBICO9517;g__MEBICO9517;s__MEBICO9517 sp003285105;
genomedb_acc GCA_003285105.1;
genomedb_target db:genomedb|GCA_003285105.1|CP030158.1_801 5 472 evalue:1.4e-162 qcov:99.20 identity:60.90;
kegg_pathway_id 00251; 00330; 00910; 00471;
kegg_pathway_name Glutamate metabolism; Arginine and proline metabolism; Nitrogen metabolism; D-Glutamine and D-glutamate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id GLUTAMATE-SYN2-PWY; PWY-5766; ARGININE-SYN4-PWY; PWY-5505;
metacyc_pathway_name L-glutamate biosynthesis II;; L-glutamate degradation X;; L-ornithine biosynthesis II;; L-glutamate and L-glutamine biosynthesis;;
metacyc_pathway_type GLUTAMATE-SYN;; GLUTAMATE-DEG;; L-Ornithine-Biosynthesis;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;;
pfam_acc PF00208; PF02812;
pfam_desc Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF00208.21 evalue:4.3e-52 score:176.5 best_domain_score:167.1 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:2.5e-53 score:178.6 best_domain_score:177.9 name:ELFV_dehydrog_N;
sprot_desc Glutamate dehydrogenase, mitochondrial;
sprot_id sp|Q54KB7|DHE3_DICDI;
sprot_target db:uniprot_sprot|sp|Q54KB7|DHE3_DICDI 1 469 evalue:5.4e-126 qcov:99.40 identity:46.90;
26456 26199 CDS
ID metaerg.pl|06174
allgo_ids GO:0043231; GO:0051537;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Palsa-343;s__Palsa-343 sp003167515;
genomedb_acc GCA_003167515.1;
genomedb_target db:genomedb|GCA_003167515.1|PMSS01000481.1_5 1 70 evalue:5.3e-17 qcov:82.40 identity:66.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF09360;
pfam_desc Iron-binding zinc finger CDGSH type;
pfam_id zf-CDGSH;
pfam_target db:Pfam-A.hmm|PF09360.10 evalue:3e-19 score:68.2 best_domain_score:67.8 name:zf-CDGSH;
27163 26453 CDS
ID metaerg.pl|06175
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Gp7-AA8;f__Gp7-AA8;g__QHVT01;s__QHVT01 sp003223645;
genomedb_acc GCA_003223645.1;
genomedb_target db:genomedb|GCA_003223645.1|PYQ26713.1 47 236 evalue:4.4e-29 qcov:80.50 identity:38.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
sp YES;
26453 26575 signal_peptide
ID metaerg.pl|06176
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
27667 27167 CDS
ID metaerg.pl|06177
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF07452;
pfam_desc CHRD domain;
pfam_id CHRD;
pfam_target db:Pfam-A.hmm|PF07452.12 evalue:1.1e-05 score:25.6 best_domain_score:25.1 name:CHRD;
sp YES;
27167 27235 lipoprotein_signal_peptide
ID metaerg.pl|06178
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
27933 29282 CDS
ID metaerg.pl|06179
allec_ids 1.17.7.3; 1.17.7.1;
allgo_ids GO:0016114; GO:0046429; GO:0055114; GO:0051539; GO:0005506; GO:0019288;
allko_ids K03526;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91502.1 18 420 evalue:7.5e-163 qcov:89.80 identity:71.70;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id PWY-5121; PWY-6270; NONMEVIPP-PWY;
metacyc_pathway_name superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; isoprene biosynthesis I;; methylerythritol phosphate pathway I;;
metacyc_pathway_type DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; ISOPRENOIDS; Super-Pathways;; MEP-Pathways;;
pfam_acc PF04551;
pfam_desc GcpE protein;
pfam_id GcpE;
pfam_target db:Pfam-A.hmm|PF04551.14 evalue:1e-111 score:372.6 best_domain_score:372.4 name:GcpE;
sprot_desc 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin);
sprot_id sp|Q029T9|ISPG_SOLUE;
sprot_target db:uniprot_sprot|sp|Q029T9|ISPG_SOLUE 18 423 evalue:2.1e-148 qcov:90.40 identity:67.10;
tigrfam_acc TIGR00612;
tigrfam_desc 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ispG_gcpE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00612 evalue:3.3e-117 score:390.8 best_domain_score:390.6 name:TIGR00612;
30676 29402 CDS
ID metaerg.pl|06180
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90126.1 12 423 evalue:2.4e-150 qcov:97.20 identity:64.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF07980;
pfam_desc SusD family;
pfam_id SusD_RagB;
pfam_target db:Pfam-A.hmm|PF07980.11 evalue:4.2e-08 score:32.4 best_domain_score:31.9 name:SusD_RagB;
sp YES;
29402 29467 lipoprotein_signal_peptide
ID metaerg.pl|06181
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
33759 30691 CDS
ID metaerg.pl|06182
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90125.1 16 1022 evalue:0.0e+00 qcov:98.50 identity:59.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF13715; PF13620; PF07715; PF00593;
pfam_desc CarboxypepD_reg-like domain; Carboxypeptidase regulatory-like domain; TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id CarbopepD_reg_2; CarboxypepD_reg; Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:5.3e-19 score:67.3 best_domain_score:65.3 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF13620.6 evalue:1.2e-16 score:60.0 best_domain_score:58.0 name:CarboxypepD_reg; db:Pfam-A.hmm|PF07715.15 evalue:1.9e-19 score:69.4 best_domain_score:69.4 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:6.3e-30 score:104.7 best_domain_score:104.7 name:TonB_dep_Rec;
sp YES;
tigrfam_acc TIGR04056;
tigrfam_desc TonB-linked outer membrane protein, SusC/RagA family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name OMP_RagA_SusC;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR04056 evalue:1.6e-131 score:439.6 best_domain_score:436.6 name:TIGR04056;
tm_num 1;
30691 30807 signal_peptide
ID metaerg.pl|06183
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
33759 30691 transmembrane_helix
ID metaerg.pl|06184
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology i30751-30819o;
35383 34004 CDS
ID metaerg.pl|06185
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatimonas;s__Gemmatimonas phototrophica;
genomedb_acc GCF_000695095.2;
genomedb_target db:genomedb|GCF_000695095.2|WP_043581032.1 29 453 evalue:9.1e-55 qcov:92.60 identity:37.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF07980;
pfam_desc SusD family;
pfam_id SusD_RagB;
pfam_target db:Pfam-A.hmm|PF07980.11 evalue:3.7e-14 score:52.2 best_domain_score:51.9 name:SusD_RagB;
sp YES;
34004 34105 lipoprotein_signal_peptide
ID metaerg.pl|06186
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
38421 35410 CDS
ID metaerg.pl|06187
allgo_ids GO:0009279; GO:0005615; GO:0016021; GO:0019867; GO:0004181; GO:2001070; GO:0006518; GO:0016485; GO:0005983;
allko_ids K21573;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rhodothermaceae;g__Rhodothermus;s__Rhodothermus profundi;
genomedb_acc GCF_900142415.1;
genomedb_target db:genomedb|GCF_900142415.1|WP_072715120.1 45 1003 evalue:7.6e-139 qcov:95.60 identity:34.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF13715; PF13620; PF07715; PF00593;
pfam_desc CarboxypepD_reg-like domain; Carboxypeptidase regulatory-like domain; TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id CarbopepD_reg_2; CarboxypepD_reg; Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:6e-18 score:63.9 best_domain_score:62.6 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF13620.6 evalue:1.7e-18 score:65.9 best_domain_score:64.1 name:CarboxypepD_reg; db:Pfam-A.hmm|PF07715.15 evalue:1.4e-21 score:76.3 best_domain_score:74.6 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:2.9e-38 score:132.2 best_domain_score:132.2 name:TonB_dep_Rec;
sp YES;
sprot_desc TonB-dependent receptor SusC;
sprot_id sp|Q8A1G1|SUSC_BACTN;
sprot_target db:uniprot_sprot|sp|Q8A1G1|SUSC_BACTN 47 752 evalue:5.8e-45 qcov:70.40 identity:24.30;
tigrfam_acc TIGR04056;
tigrfam_desc TonB-linked outer membrane protein, SusC/RagA family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name OMP_RagA_SusC;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR04056 evalue:2.2e-128 score:429.3 best_domain_score:241.8 name:TIGR04056;
tm_num 1;
35410 35550 signal_peptide
ID metaerg.pl|06188
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
38421 35410 transmembrane_helix
ID metaerg.pl|06189
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology i35470-35538o;
40125 38749 CDS
ID metaerg.pl|06190
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatimonas;s__Gemmatimonas sp002331565;
genomedb_acc GCA_002331565.1;
genomedb_target db:genomedb|GCA_002331565.1|DCZC01000229.1_15 23 456 evalue:8.5e-61 qcov:94.80 identity:38.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF07980;
pfam_desc SusD family;
pfam_id SusD_RagB;
pfam_target db:Pfam-A.hmm|PF07980.11 evalue:1.5e-14 score:53.5 best_domain_score:52.8 name:SusD_RagB;
sp YES;
tm_num 1;
38749 38844 lipoprotein_signal_peptide
ID metaerg.pl|06191
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
40125 38749 transmembrane_helix
ID metaerg.pl|06192
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology i38794-38862o;
43090 40136 CDS
ID metaerg.pl|06193
allgo_ids GO:0009279; GO:0005615; GO:0016021; GO:0019867; GO:0004181; GO:2001070; GO:0006518; GO:0016485; GO:0005983;
allko_ids K21573;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000111.1_10 26 957 evalue:6.1e-141 qcov:94.70 identity:35.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF13715; PF13620; PF14905; PF07715; PF00593;
pfam_desc CarboxypepD_reg-like domain; Carboxypeptidase regulatory-like domain; Outer membrane protein beta-barrel family; TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id CarbopepD_reg_2; CarboxypepD_reg; OMP_b-brl_3; Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:3.9e-13 score:48.4 best_domain_score:47.3 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF13620.6 evalue:6.1e-13 score:48.1 best_domain_score:46.1 name:CarboxypepD_reg; db:Pfam-A.hmm|PF14905.6 evalue:4.1e-08 score:31.9 best_domain_score:25.4 name:OMP_b-brl_3; db:Pfam-A.hmm|PF07715.15 evalue:1.1e-23 score:83.1 best_domain_score:83.1 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:4.4e-37 score:128.3 best_domain_score:128.3 name:TonB_dep_Rec;
sp YES;
sprot_desc TonB-dependent receptor SusC;
sprot_id sp|Q8A1G1|SUSC_BACTN;
sprot_target db:uniprot_sprot|sp|Q8A1G1|SUSC_BACTN 47 983 evalue:5.9e-34 qcov:95.20 identity:21.60;
tigrfam_acc TIGR04056;
tigrfam_desc TonB-linked outer membrane protein, SusC/RagA family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name OMP_RagA_SusC;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR04056 evalue:7.7e-120 score:401.0 best_domain_score:220.0 name:TIGR04056;
40136 40276 signal_peptide
ID metaerg.pl|06194
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
43962 43387 CDS
ID metaerg.pl|06195
allgo_ids GO:0009055; GO:0020037;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__HRBIN33;s__HRBIN33 sp002923375;
genomedb_acc GCA_002923375.1;
genomedb_target db:genomedb|GCA_002923375.1|GBD31693.1 33 174 evalue:1.8e-17 qcov:74.30 identity:37.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00034;
pfam_desc Cytochrome c;
pfam_id Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF00034.21 evalue:2.9e-07 score:30.8 best_domain_score:30.3 name:Cytochrom_C;
sp YES;
43387 43533 lipoprotein_signal_peptide
ID metaerg.pl|06196
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
44283 45473 CDS
ID metaerg.pl|06197
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000019.1_25 1 396 evalue:2.5e-101 qcov:100.00 identity:52.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00364; PF13533; PF13437; PF16576;
pfam_desc Biotin-requiring enzyme; Biotin-lipoyl like; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl; Biotin_lipoyl_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:1.8e-05 score:23.7 best_domain_score:15.1 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:7.4e-15 score:53.8 best_domain_score:41.9 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:5.1e-19 score:68.2 best_domain_score:54.1 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:2.4e-31 score:107.9 best_domain_score:107.0 name:HlyD_D23;
sp YES;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:1.6e-51 score:174.3 best_domain_score:173.9 name:TIGR01730;
tm_num 1;
44283 44372 signal_peptide
ID metaerg.pl|06198
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
44283 45473 transmembrane_helix
ID metaerg.pl|06199
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology i44301-44360o;
45470 46924 CDS
ID metaerg.pl|06200
allgo_ids GO:0015562; GO:0055085;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000018.1_46 16 454 evalue:1.0e-35 qcov:90.70 identity:31.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF02321;
pfam_desc Outer membrane efflux protein;
pfam_id OEP;
pfam_target db:Pfam-A.hmm|PF02321.18 evalue:9.3e-37 score:125.9 best_domain_score:77.7 name:OEP;
sp YES;
45470 45556 signal_peptide
ID metaerg.pl|06201
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
46928 50374 CDS
ID metaerg.pl|06202
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0009877;
allko_ids K03296;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04619.1 1 1079 evalue:0.0e+00 qcov:94.00 identity:66.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00873; PF02355;
pfam_desc AcrB/AcrD/AcrF family; Protein export membrane protein;
pfam_id ACR_tran; SecD_SecF;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:5.5e-231 score:768.4 best_domain_score:417.5 name:ACR_tran; db:Pfam-A.hmm|PF02355.16 evalue:1.9e-07 score:29.9 best_domain_score:22.4 name:SecD_SecF;
sprot_desc Nodulation protein NolG;
sprot_id sp|P25197|NOLG_RHIME;
sprot_target db:uniprot_sprot|sp|P25197|NOLG_RHIME 1 1073 evalue:1.5e-108 qcov:93.50 identity:28.40;
tm_num 12;
46928 50374 transmembrane_helix
ID metaerg.pl|06203
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology i46961-47029o47930-47989i48008-48076o48104-48163i48221-48289o48317-48385i48689-48748o49679-49747i49760-49828o49841-49909i49970-50038o50066-50134i;
50371 53643 CDS
ID metaerg.pl|06204
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886;
allko_ids K07788;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000018.1_44 1 1069 evalue:0.0e+00 qcov:98.10 identity:57.50;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00873; PF03176; PF02355;
pfam_desc AcrB/AcrD/AcrF family; MMPL family; Protein export membrane protein;
pfam_id ACR_tran; MMPL; SecD_SecF;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:6.3e-175 score:582.9 best_domain_score:581.4 name:ACR_tran; db:Pfam-A.hmm|PF03176.15 evalue:9.5e-13 score:47.0 best_domain_score:44.7 name:MMPL; db:Pfam-A.hmm|PF02355.16 evalue:3.8e-08 score:32.2 best_domain_score:19.7 name:SecD_SecF;
sp YES;
sprot_desc Multidrug resistance protein MdtB;
sprot_id sp|A8GHQ9|MDTB_SERP5;
sprot_target db:uniprot_sprot|sp|A8GHQ9|MDTB_SERP5 3 1068 evalue:3.2e-73 qcov:97.80 identity:23.40;
tm_num 12;
50371 50448 signal_peptide
ID metaerg.pl|06205
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
50371 53643 transmembrane_helix
ID metaerg.pl|06206
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology i50395-50463o51394-51447i51466-51525o51553-51621i51679-51747o51775-51843i52042-52110o53062-53130i53143-53211o53224-53283i53365-53424o53467-53535i;
53750 55204 CDS
ID metaerg.pl|06207
allec_ids 6.1.1.17;
allgo_ids GO:0004812; GO:0005524; GO:0043039; GO:0005737; GO:0004818; GO:0000049; GO:0008270; GO:0006424;
allko_ids K01885;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000019.1_19 3 481 evalue:4.2e-167 qcov:99.00 identity:65.30;
kegg_pathway_id 00970; 00860; 00251;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Porphyrin and chlorophyll metabolism; Glutamate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id TRNA-CHARGING-PWY; PWY-5188; PWY-5918;
metacyc_pathway_name tRNA charging;; tetrapyrrole biosynthesis I (from glutamate);; superpathay of heme b biosynthesis from glutamate;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;; Tetrapyrrole-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF00749;
pfam_desc tRNA synthetases class I (E and Q), catalytic domain;
pfam_id tRNA-synt_1c;
pfam_target db:Pfam-A.hmm|PF00749.21 evalue:2.4e-87 score:292.0 best_domain_score:291.7 name:tRNA-synt_1c;
sprot_desc Glutamate--tRNA ligase 1;
sprot_id sp|Q2LQN4|SYE1_SYNAS;
sprot_target db:uniprot_sprot|sp|Q2LQN4|SYE1_SYNAS 3 478 evalue:8.6e-111 qcov:98.30 identity:47.40;
tigrfam_acc TIGR00464;
tigrfam_desc glutamate--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name gltX_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00464 evalue:1.4e-141 score:471.8 best_domain_score:471.5 name:TIGR00464;
55328 55981 CDS
ID metaerg.pl|06208
allec_ids 3.4.21.88;
allgo_ids GO:0004252; GO:0006508; GO:0003677; GO:0006281; GO:0006260; GO:0045892; GO:0009432;
allko_ids K01356;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000019.1_18 2 217 evalue:3.4e-52 qcov:99.50 identity:49.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF01726;
pfam_desc LexA DNA binding domain;
pfam_id LexA_DNA_bind;
pfam_target db:Pfam-A.hmm|PF01726.16 evalue:1.2e-17 score:62.7 best_domain_score:61.9 name:LexA_DNA_bind;
sprot_desc LexA repressor;
sprot_id sp|Q2RJF5|LEXA_MOOTA;
sprot_target db:uniprot_sprot|sp|Q2RJF5|LEXA_MOOTA 12 205 evalue:8.8e-15 qcov:89.40 identity:27.80;
56107 56553 CDS
ID metaerg.pl|06209
allec_ids 3.5.4.33;
allgo_ids GO:0002100; GO:0008251; GO:0052717; GO:0008270;
allko_ids K01485; K11991;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000050.1_14 1 142 evalue:2.0e-48 qcov:95.90 identity:69.70;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00383; PF14437;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase;
pfam_id dCMP_cyt_deam_1; MafB19-deam;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:1.1e-21 score:75.8 best_domain_score:75.5 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:1.7e-33 score:114.5 best_domain_score:114.4 name:MafB19-deam;
sprot_desc tRNA-specific adenosine deaminase;
sprot_id sp|Q99W51|TADA_STAAM;
sprot_target db:uniprot_sprot|sp|Q99W51|TADA_STAAM 1 142 evalue:2.4e-35 qcov:95.90 identity:53.50;
56550 58028 CDS
ID metaerg.pl|06210
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__AG41;s__AG41 sp003222085;
genomedb_acc GCA_003222085.1;
genomedb_target db:genomedb|GCA_003222085.1|PYP04086.1 87 467 evalue:3.3e-95 qcov:77.40 identity:48.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF02638;
pfam_desc Glycosyl hydrolase-like 10;
pfam_id GHL10;
pfam_target db:Pfam-A.hmm|PF02638.15 evalue:2.3e-24 score:85.3 best_domain_score:83.4 name:GHL10;
sp YES;
tm_num 1;
56550 56618 lipoprotein_signal_peptide
ID metaerg.pl|06211
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
56550 58028 transmembrane_helix
ID metaerg.pl|06212
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology i56586-56654o;
58043 59110 CDS
ID metaerg.pl|06213
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Bryobacterales;f__Bryobacteraceae;g__UBA690;s__UBA690 sp003487005;
genomedb_acc GCA_003487005.1;
genomedb_target db:genomedb|GCA_003487005.1|HAX43620.1 59 312 evalue:4.0e-34 qcov:71.50 identity:39.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF12146;
pfam_desc Serine aminopeptidase, S33;
pfam_id Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF12146.8 evalue:1.4e-11 score:43.3 best_domain_score:30.3 name:Hydrolase_4;
tm_num 1;
58043 59110 transmembrane_helix
ID metaerg.pl|06214
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology i58061-58129o;
59846 58989 CDS
ID metaerg.pl|06215
allko_ids K00441;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylomonadaceae;g__Methylobacter;s__Methylobacter marinus;
genomedb_acc GCF_000383855.1;
genomedb_target db:genomedb|GCF_000383855.1|WP_020157014.1 1 280 evalue:3.7e-38 qcov:98.20 identity:36.90;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:3.7e-35 score:120.7 best_domain_score:62.5 name:Usp;
61853 60117 CDS
ID metaerg.pl|06216
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter halophilus;
genomedb_acc GCF_001715195.1;
genomedb_target db:genomedb|GCF_001715195.1|WP_069129929.1 9 547 evalue:1.3e-215 qcov:93.30 identity:72.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF03553;
pfam_desc Na+/H+ antiporter family;
pfam_id Na_H_antiporter;
pfam_target db:Pfam-A.hmm|PF03553.14 evalue:2.5e-60 score:203.5 best_domain_score:198.6 name:Na_H_antiporter;
sprot_desc hypothetical protein;
sprot_id sp|P44263|Y1586_HAEIN;
sprot_target db:uniprot_sprot|sp|P44263|Y1586_HAEIN 11 499 evalue:3.6e-55 qcov:84.60 identity:32.20;
tm_num 11;
61853 60117 transmembrane_helix
ID metaerg.pl|06217
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology o60129-60188i60207-60275o60318-60386i60558-60626o60735-60803i60951-61019o61077-61145i61164-61232o61290-61358i61377-61445o61656-61724i;
62104 62676 CDS
ID metaerg.pl|06218
allec_ids 2.4.2.9;
allgo_ids GO:0009116; GO:0003723; GO:0004845; GO:0006353; GO:0006355;
allko_ids K02825; K00762;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000019.1_14 10 187 evalue:5.2e-57 qcov:93.70 identity:66.50;
kegg_pathway_id 00240; 00983;
kegg_pathway_name Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id PWY0-163; P1-PWY;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:4.9e-17 score:61.1 best_domain_score:60.8 name:Pribosyltran;
sprot_desc Bifunctional protein PyrR;
sprot_id sp|Q72KT9|PYRR_THET2;
sprot_target db:uniprot_sprot|sp|Q72KT9|PYRR_THET2 14 188 evalue:2.8e-41 qcov:92.10 identity:54.30;
62673 63737 CDS
ID metaerg.pl|06219
allec_ids 2.1.3.2;
allgo_ids GO:0006520; GO:0016597; GO:0016743; GO:0004070; GO:0006207; GO:0044205;
allko_ids K11540; K00609; K01954; K01956; K00610; K01955; K11541;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89818.1 41 352 evalue:1.2e-142 qcov:88.10 identity:82.70;
kegg_pathway_id 00251; 00252; 00240;
kegg_pathway_name Glutamate metabolism; Alanine and aspartate metabolism; Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id PWY0-162; PRPP-PWY; PWY-5686;
metacyc_pathway_name superpathway of pyrimidine ribonucleotides de novo biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;;
metacyc_pathway_type Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; Super-Pathways;; UMP-Biosynthesis;;
pfam_acc PF00185; PF02729;
pfam_desc Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain;
pfam_id OTCace; OTCace_N;
pfam_target db:Pfam-A.hmm|PF00185.24 evalue:2e-23 score:82.4 best_domain_score:80.5 name:OTCace; db:Pfam-A.hmm|PF02729.21 evalue:4.4e-41 score:139.6 best_domain_score:139.2 name:OTCace_N;
sprot_desc Aspartate carbamoyltransferase;
sprot_id sp|C1A8J7|PYRB_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A8J7|PYRB_GEMAT 39 354 evalue:1.3e-140 qcov:89.30 identity:80.70;
tigrfam_acc TIGR00670;
tigrfam_desc aspartate carbamoyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name asp_carb_tr;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00670 evalue:1.4e-95 score:319.1 best_domain_score:318.9 name:TIGR00670;
63897 65273 CDS
ID metaerg.pl|06220
allec_ids 3.5.2.3;
allgo_ids GO:0016787; GO:0004151; GO:0008270; GO:0044205;
allko_ids K01465;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000005.1_29 2 448 evalue:9.7e-174 qcov:97.60 identity:70.20;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id PRPP-PWY; PWY-5686; PWY0-162;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;;
metacyc_pathway_type Super-Pathways;; UMP-Biosynthesis;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF01979; PF07969; PF12890;
pfam_desc Amidohydrolase family; Amidohydrolase family; Dihydro-orotase-like;
pfam_id Amidohydro_1; Amidohydro_3; DHOase;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:7.2e-26 score:90.5 best_domain_score:90.2 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:4.1e-13 score:48.8 best_domain_score:30.0 name:Amidohydro_3; db:Pfam-A.hmm|PF12890.7 evalue:5.7e-15 score:54.7 best_domain_score:54.0 name:DHOase;
sprot_desc Dihydroorotase;
sprot_id sp|Q39US3|PYRC_GEOMG;
sprot_target db:uniprot_sprot|sp|Q39US3|PYRC_GEOMG 6 443 evalue:6.0e-122 qcov:95.60 identity:51.40;
tigrfam_acc TIGR00857;
tigrfam_desc dihydroorotase, multifunctional complex type;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name pyrC_multi;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00857 evalue:7.9e-122 score:406.3 best_domain_score:405.1 name:TIGR00857;
65662 65399 CDS
ID metaerg.pl|06221
allgo_ids GO:0003723; GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02968;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD49015.1 1 76 evalue:1.7e-15 qcov:87.40 identity:65.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF01649;
pfam_desc Ribosomal protein S20;
pfam_id Ribosomal_S20p;
pfam_target db:Pfam-A.hmm|PF01649.18 evalue:2.4e-21 score:75.4 best_domain_score:75.2 name:Ribosomal_S20p;
sprot_desc 30S ribosomal protein S20;
sprot_id sp|Q2RKY2|RS20_MOOTA;
sprot_target db:uniprot_sprot|sp|Q2RKY2|RS20_MOOTA 1 85 evalue:2.9e-09 qcov:97.70 identity:43.20;
tigrfam_acc TIGR00029;
tigrfam_desc ribosomal protein bS20;
tigrfam_mainrole Protein synthesis;
tigrfam_name S20;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00029 evalue:6.4e-16 score:57.8 best_domain_score:57.6 name:TIGR00029;
65756 66616 CDS
ID metaerg.pl|06222
allgo_ids GO:0005737; GO:0007049; GO:0051301; GO:0007059;
allko_ids K05896;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002724575;
genomedb_acc GCA_002724575.1;
genomedb_target db:genomedb|GCA_002724575.1|MBO77679.1 40 284 evalue:2.2e-83 qcov:85.70 identity:66.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF02616;
pfam_desc Segregation and condensation protein ScpA;
pfam_id SMC_ScpA;
pfam_target db:Pfam-A.hmm|PF02616.14 evalue:1e-22 score:80.5 best_domain_score:73.0 name:SMC_ScpA;
sprot_desc Segregation and condensation protein A;
sprot_id sp|Q83CP8|SCPA_COXBU;
sprot_target db:uniprot_sprot|sp|Q83CP8|SCPA_COXBU 21 264 evalue:1.3e-29 qcov:85.30 identity:36.00;
66627 67238 CDS
ID metaerg.pl|06223
allgo_ids GO:0051304; GO:0005737; GO:0051301; GO:0006260;
allko_ids K06024;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC05971.1 1 196 evalue:5.8e-70 qcov:96.60 identity:69.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF04079;
pfam_desc Segregation and condensation complex subunit ScpB;
pfam_id SMC_ScpB;
pfam_target db:Pfam-A.hmm|PF04079.16 evalue:7e-51 score:171.3 best_domain_score:171.0 name:SMC_ScpB;
sprot_desc Segregation and condensation protein B;
sprot_id sp|Q2RIR6|SCPB_MOOTA;
sprot_target db:uniprot_sprot|sp|Q2RIR6|SCPB_MOOTA 7 163 evalue:1.3e-31 qcov:77.30 identity:48.40;
tigrfam_acc TIGR00281;
tigrfam_desc segregation and condensation protein B;
tigrfam_mainrole DNA metabolism;
tigrfam_name TIGR00281;
tigrfam_sub1role Chromosome-associated proteins;
tigrfam_target db:TIGRFAMs.hmm|TIGR00281 evalue:1.4e-34 score:118.5 best_domain_score:118.2 name:TIGR00281;
67235 68017 CDS
ID metaerg.pl|06224
allec_ids 5.4.99.-;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0005829; GO:0000455;
allko_ids K06178;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000001.1_25 1 237 evalue:6.7e-63 qcov:91.20 identity:54.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id PWY-6115; PWY-5377; PWY-112; RIBOKIN-PWY; PWY-6005; PWY-5992; PWY-5203; PWY-6109; PWY-6008; PWY-5672;
metacyc_pathway_name ; α-amyrin biosynthesis;; lupeol biosynthesis;; ribose phosphorylation;; marneral biosynthesis;; thalianol and derivatives biosynthesis;; soybean saponin I biosynthesis;; mangrove triterpenoid biosynthesis;; baruol biosynthesis;; ginsenosides biosynthesis;;
metacyc_pathway_type ; TRITERPENOID-SYN;; TRITERPENOID-SYN;; Sugars-And-Polysaccharides-Degradation;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;;
pfam_acc PF00849; PF01479;
pfam_desc RNA pseudouridylate synthase; S4 domain;
pfam_id PseudoU_synth_2; S4;
pfam_target db:Pfam-A.hmm|PF00849.22 evalue:1.9e-18 score:66.3 best_domain_score:65.1 name:PseudoU_synth_2; db:Pfam-A.hmm|PF01479.25 evalue:8.3e-14 score:50.3 best_domain_score:49.3 name:S4;
sprot_desc Uncharacterized RNA pseudouridine synthase aq_1464;
sprot_id sp|O67444|Y1464_AQUAE;
sprot_target db:uniprot_sprot|sp|O67444|Y1464_AQUAE 4 246 evalue:4.9e-52 qcov:93.50 identity:45.50;
tigrfam_acc TIGR00093;
tigrfam_desc pseudouridine synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00093;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00093 evalue:1.3e-42 score:144.5 best_domain_score:144.1 name:TIGR00093;
68014 68664 CDS
ID metaerg.pl|06225
allec_ids 2.4.2.9;
allgo_ids GO:0009116; GO:0005525; GO:0000287; GO:0004845; GO:0044206; GO:0006223;
allko_ids K00761;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Planomicrobium;s__Planomicrobium soli;
genomedb_acc GCF_003014655.1;
genomedb_target db:genomedb|GCF_003014655.1|WP_106532849.1 13 216 evalue:1.8e-77 qcov:94.40 identity:69.10;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id PWY0-163; P1-PWY;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF00156; PF14681;
pfam_desc Phosphoribosyl transferase domain; Uracil phosphoribosyltransferase;
pfam_id Pribosyltran; UPRTase;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:1.4e-11 score:43.4 best_domain_score:42.1 name:Pribosyltran; db:Pfam-A.hmm|PF14681.6 evalue:1.6e-73 score:245.8 best_domain_score:245.6 name:UPRTase;
sprot_desc Uracil phosphoribosyltransferase;
sprot_id sp|C5D9M4|UPP_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D9M4|UPP_GEOSW 13 216 evalue:5.6e-78 qcov:94.40 identity:67.20;
tigrfam_acc TIGR01091;
tigrfam_desc uracil phosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name upp;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01091 evalue:2.5e-86 score:287.8 best_domain_score:287.6 name:TIGR01091;
68737 69825 CDS
ID metaerg.pl|06226
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89953.1 1 360 evalue:7.9e-78 qcov:99.40 identity:45.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF18854;
pfam_desc Bacterial archaeo-eukaryotic release factor family 10;
pfam_id baeRF_family10;
pfam_target db:Pfam-A.hmm|PF18854.1 evalue:1.6e-14 score:53.6 best_domain_score:53.6 name:baeRF_family10;
69917 71026 CDS
ID metaerg.pl|06227
allec_ids 5.1.3.23; 5.1.3.14;
allgo_ids GO:0050378; GO:0008761; GO:0071555; GO:0009243; GO:0000271;
allko_ids K13019;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Fen-1247;s__Fen-1247 sp003136975;
genomedb_acc GCA_003136975.1;
genomedb_target db:genomedb|GCA_003136975.1|PLEG01000192.1_8 1 363 evalue:1.8e-130 qcov:98.40 identity:66.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id ECASYN-PWY; TEICHOICACID-PWY;
metacyc_pathway_name enterobacterial common antigen biosynthesis;; poly(glycerol phosphate) wall teichoic acid biosynthesis;;
metacyc_pathway_type Lipopolysaccharide-Biosynthesis; Super-Pathways;; Teichoic-Acids-Biosynthesis;;
pfam_acc PF02350; PF13579;
pfam_desc UDP-N-acetylglucosamine 2-epimerase; Glycosyl transferase 4-like domain;
pfam_id Epimerase_2; Glyco_trans_4_4;
pfam_target db:Pfam-A.hmm|PF02350.19 evalue:1.2e-99 score:332.7 best_domain_score:332.5 name:Epimerase_2; db:Pfam-A.hmm|PF13579.6 evalue:4e-08 score:33.1 best_domain_score:31.5 name:Glyco_trans_4_4;
sprot_desc UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase;
sprot_id sp|G3XD61|WBPI_PSEAE;
sprot_target db:uniprot_sprot|sp|G3XD61|WBPI_PSEAE 1 318 evalue:1.2e-64 qcov:86.20 identity:45.70;
tigrfam_acc TIGR00236;
tigrfam_desc UDP-N-acetylglucosamine 2-epimerase;
tigrfam_mainrole Cell envelope;
tigrfam_name wecB;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00236 evalue:1.8e-83 score:279.8 best_domain_score:279.6 name:TIGR00236;
71248 71036 CDS
ID metaerg.pl|06228
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
tm_num 1;
71248 71036 transmembrane_helix
ID metaerg.pl|06229
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology o71153-71221i;
72774 71320 CDS
ID metaerg.pl|06230
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Paramesorhizobium;s__Paramesorhizobium leguminum;
genomedb_acc GCF_003217235.1;
genomedb_target db:genomedb|GCF_003217235.1|WP_110749456.1 1 483 evalue:1.4e-210 qcov:99.80 identity:71.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF14243; PF08443; PF14401;
pfam_desc ATP-grasp domain, R2K clade family 3; RimK-like ATP-grasp domain; RimK-like ATPgrasp N-terminal domain;
pfam_id R2K_3; RimK; RLAN;
pfam_target db:Pfam-A.hmm|PF14243.6 evalue:5.7e-07 score:29.0 best_domain_score:26.9 name:R2K_3; db:Pfam-A.hmm|PF08443.11 evalue:2e-08 score:33.3 best_domain_score:31.5 name:RimK; db:Pfam-A.hmm|PF14401.6 evalue:2.3e-41 score:140.2 best_domain_score:139.4 name:RLAN;
73846 72776 CDS
ID metaerg.pl|06231
allgo_ids GO:0016747;
allko_ids K06957;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Paramesorhizobium;s__Paramesorhizobium leguminum;
genomedb_acc GCF_003217235.1;
genomedb_target db:genomedb|GCF_003217235.1|WP_110749781.1 1 353 evalue:8.7e-138 qcov:99.20 identity:69.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00583; PF13673; PF13508; PF11814; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Peptidase_C39 like family; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7; DUF3335; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:3.9e-14 score:52.1 best_domain_score:51.3 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:4e-11 score:42.2 best_domain_score:41.6 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:2.7e-09 score:36.6 best_domain_score:35.6 name:Acetyltransf_7; db:Pfam-A.hmm|PF11814.8 evalue:1.9e-78 score:261.9 best_domain_score:261.5 name:DUF3335; db:Pfam-A.hmm|PF08445.10 evalue:5.5e-05 score:22.3 best_domain_score:21.3 name:FR47;
74056 74129 tRNA
ID metaerg.pl|06232
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
name tRNA_Met_cat;
74197 74970 CDS
ID metaerg.pl|06233
allgo_ids GO:0006890; GO:0016021;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__HRBIN33;s__HRBIN33 sp002923375;
genomedb_acc GCA_002923375.1;
genomedb_target db:genomedb|GCA_002923375.1|GBD32691.1 1 256 evalue:6.2e-69 qcov:99.60 identity:54.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF08551; PF01694;
pfam_desc Eukaryotic integral membrane protein (DUF1751); Rhomboid family;
pfam_id DUF1751; Rhomboid;
pfam_target db:Pfam-A.hmm|PF08551.10 evalue:7.5e-05 score:22.5 best_domain_score:20.9 name:DUF1751; db:Pfam-A.hmm|PF01694.22 evalue:8.8e-34 score:115.9 best_domain_score:115.2 name:Rhomboid;
tm_num 6;
74197 74970 transmembrane_helix
ID metaerg.pl|06234
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology i74233-74301o74329-74397i74434-74487o74500-74559i74578-74646o74674-74727i;
75363 75010 CDS
ID metaerg.pl|06235
allgo_ids GO:0003747; GO:0006415;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000169.1_4 9 116 evalue:1.7e-26 qcov:92.30 identity:63.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00472;
pfam_desc RF-1 domain;
pfam_id RF-1;
pfam_target db:Pfam-A.hmm|PF00472.20 evalue:6.5e-25 score:86.6 best_domain_score:86.1 name:RF-1;
76493 75363 CDS
ID metaerg.pl|06236
allgo_ids GO:0006355;
allko_ids K07777; K07682; K07649; K07654; K03407; K01120; K07673; K08475; K07646; K07641; K07652; K07768; K02575; K07683; K07778; K13533; K07648; K07651; K11711; K07642; K00760; K02484; K11640; K04486; K07677; K07708; K07645; K08282; K01937; K11231; K01090; K02491; K03388; K02668; K08479; K07716; K02489; K07710; K02480; K08801; K02482; K07636; K07653; K11527; K02030; K07678; K10715; K01769; K07676; K10681; K06379; K07709; K13761; K02486; K12767; K11357; K10125; K02342; K04757; K07680; K07647; K07675;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000169.1_3 6 345 evalue:3.1e-61 qcov:90.40 identity:39.40;
kegg_pathway_id 04011; 02020; 03090; 00790; 00340; 00983; 00230; 00240; 03030;
kegg_pathway_name MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Folate biosynthesis; Histidine metabolism; Drug metabolism - other enzymes; Purine metabolism; Pyrimidine metabolism; DNA replication;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00989; PF08448; PF13188; PF13426; PF00072;
pfam_desc PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id PAS; PAS_4; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF00989.25 evalue:5.4e-08 score:32.1 best_domain_score:15.3 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:4.2e-13 score:48.8 best_domain_score:27.3 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:1.1e-10 score:40.5 best_domain_score:19.1 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:3.5e-10 score:39.3 best_domain_score:22.3 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:2.4e-15 score:55.9 best_domain_score:55.3 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:5.2e-13 score:48.4 best_domain_score:25.3 name:TIGR00229;
76844 77959 CDS
ID metaerg.pl|06237
allgo_ids GO:0016021; GO:0005886; GO:0015562; GO:0009372;
allko_ids K11744;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA6934;s__UBA6934 sp002346625;
genomedb_acc GCA_002346625.1;
genomedb_target db:genomedb|GCA_002346625.1|DEAF01000033.1_17 10 344 evalue:8.0e-94 qcov:90.30 identity:58.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:1.5e-47 score:161.6 best_domain_score:161.3 name:AI-2E_transport;
sprot_desc AI-2 transport protein TqsA;
sprot_id sp|P0AFS5|TQSA_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AFS5|TQSA_ECOLI 11 342 evalue:3.4e-43 qcov:89.50 identity:35.80;
tm_num 8;
76844 77959 transmembrane_helix
ID metaerg.pl|06238
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology i76862-76930o76943-77011i77030-77098o77267-77335i77432-77500o77543-77611i77624-77692o77750-77818i;
77982 78497 CDS
ID metaerg.pl|06239
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000009.1_110 11 168 evalue:7.6e-39 qcov:92.40 identity:51.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
79568 78579 CDS
ID metaerg.pl|06240
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
81154 79916 CDS
ID metaerg.pl|06241
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
sp YES;
79916 80023 signal_peptide
ID metaerg.pl|06242
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
81593 82540 CDS
ID metaerg.pl|06243
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__13-1-40CM-70-15;s__13-1-40CM-70-15 sp003223415;
genomedb_acc GCA_003223415.1;
genomedb_target db:genomedb|GCA_003223415.1|PYP69588.1 12 312 evalue:7.1e-67 qcov:95.60 identity:50.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:2e-30 score:105.0 best_domain_score:56.0 name:EamA;
tm_num 10;
81593 82540 transmembrane_helix
ID metaerg.pl|06244
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology i81611-81679o81707-81766i81815-81883o81896-81964i81989-82057o82067-82126i82163-82231o82259-82327i82346-82414o82424-82483i;
84003 82516 CDS
ID metaerg.pl|06245
allgo_ids GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__Truepera;s__Truepera radiovictrix;
genomedb_acc GCF_000092425.1;
genomedb_target db:genomedb|GCF_000092425.1|WP_083770765.1 76 495 evalue:2.5e-74 qcov:84.80 identity:42.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00924;
pfam_desc Mechanosensitive ion channel;
pfam_id MS_channel;
pfam_target db:Pfam-A.hmm|PF00924.18 evalue:5.6e-37 score:126.5 best_domain_score:126.0 name:MS_channel;
sp YES;
tm_num 2;
82516 82587 signal_peptide
ID metaerg.pl|06246
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
84003 82516 transmembrane_helix
ID metaerg.pl|06247
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology o82993-83061i83137-83205o;
85131 84055 CDS
ID metaerg.pl|06248
allgo_ids GO:0000155; GO:0007165;
allko_ids K07676; K10681; K06379; K07650; K07644; K07709; K11357; K10125; K11629; K04757; K14509; K11520; K07769; K02486; K11383; K12767; K07717; K07675; K10942; K13040; K07647; K10916; K08479; K07674; K03388; K02668; K01768; K07656; K07710; K07640; K07716; K02489; K07636; K07653; K07638; K02480; K14489; K02482; K08801; K07678; K10715; K13587; K02030; K11527; K07642; K11711; K11640; K11356; K02484; K08282; K07704; K10909; K07645; K07708; K07677; K11231; K07643; K03407; K07649; K07682; K00936; K07654; K07652; K07673; K07639; K08475; K07646; K07641; K11328; K08884; K00873; K07711; K07768; K11633; K07778; K07718; K07651; K07648; K02478; K07679;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91905.1 38 356 evalue:1.1e-50 qcov:89.10 identity:41.80;
kegg_pathway_id 00010; 00710; 00230; 05111; 00620; 03090; 02020; 04011; 00790;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF02518; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:7.6e-17 score:61.1 best_domain_score:59.7 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:9.4e-11 score:40.8 best_domain_score:39.2 name:HisKA;
86431 85124 CDS
ID metaerg.pl|06249
allgo_ids GO:0005524; GO:0016887; GO:0005737; GO:0043565; GO:0008134; GO:0000160; GO:0006355;
allko_ids K11640; K02484; K07642; K11711; K11231; K08282; K07677; K07652; K07639; K07673; K07641; K07646; K03407; K07654; K07648; K07768; K06379; K07676; K10681; K07675; K07647; K11357; K04757; K12767; K07710; K07716; K02489; K08479; K03388; K02668; K10715; K07678; K11527; K07636; K07653; K02480; K02482;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91906.1 1 430 evalue:1.2e-149 qcov:98.90 identity:63.10;
kegg_pathway_id 03090; 02020; 04011; 00790;
kegg_pathway_name Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF07728; PF02954; PF01078; PF00072; PF00158; PF14532;
pfam_desc AAA domain (dynein-related subfamily); Bacterial regulatory protein, Fis family; Magnesium chelatase, subunit ChlI; Response regulator receiver domain; Sigma-54 interaction domain; Sigma-54 interaction domain;
pfam_id AAA_5; HTH_8; Mg_chelatase; Response_reg; Sigma54_activat; Sigma54_activ_2;
pfam_target db:Pfam-A.hmm|PF07728.14 evalue:1.7e-07 score:30.5 best_domain_score:26.9 name:AAA_5; db:Pfam-A.hmm|PF02954.19 evalue:1.4e-10 score:40.0 best_domain_score:40.0 name:HTH_8; db:Pfam-A.hmm|PF01078.21 evalue:5.5e-06 score:25.1 best_domain_score:20.8 name:Mg_chelatase; db:Pfam-A.hmm|PF00072.24 evalue:2.7e-16 score:59.0 best_domain_score:57.8 name:Response_reg; db:Pfam-A.hmm|PF00158.26 evalue:3.2e-65 score:218.2 best_domain_score:217.6 name:Sigma54_activat; db:Pfam-A.hmm|PF14532.6 evalue:1.2e-19 score:70.0 best_domain_score:67.5 name:Sigma54_activ_2;
sprot_desc Transcriptional regulatory protein ZraR;
sprot_id sp|Q9APD9|ZRAR_KLEOX;
sprot_target db:uniprot_sprot|sp|Q9APD9|ZRAR_KLEOX 2 418 evalue:4.4e-82 qcov:95.90 identity:42.90;
88174 86849 CDS
ID metaerg.pl|06250
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A sulfidiphilus;
genomedb_acc GCF_000021985.1;
genomedb_target db:genomedb|GCF_000021985.1|WP_012638923.1 36 436 evalue:7.3e-78 qcov:90.90 identity:43.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF01041;
pfam_desc DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF01041.17 evalue:2.9e-44 score:151.1 best_domain_score:147.6 name:DegT_DnrJ_EryC1;
89147 88131 CDS
ID metaerg.pl|06251
allgo_ids GO:0000160;
allko_ids K07636; K07653; K04757; K03407; K07654; K07646; K07641; K07642;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91908.1 13 315 evalue:1.5e-43 qcov:89.60 identity:36.90;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00990; PF00072;
pfam_desc Diguanylate cyclase, GGDEF domain; Response regulator receiver domain;
pfam_id GGDEF; Response_reg;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:1.1e-07 score:31.0 best_domain_score:27.5 name:GGDEF; db:Pfam-A.hmm|PF00072.24 evalue:1.4e-08 score:34.1 best_domain_score:33.3 name:Response_reg;
89751 90221 CDS
ID metaerg.pl|06252
allec_ids 1.7.2.2;
allgo_ids GO:0016021; GO:0005886; GO:0020037; GO:0046872; GO:0019333; GO:0022900; GO:0006807;
allko_ids K15876;
genomedb_OC d__Bacteria;p__Planctomycetota;c__Planctomycetes;o__Pirellulales;f__Pirellulaceae;g__Blastopirellula_A;s__Blastopirellula_A marina_A;
genomedb_acc GCF_002967765.1;
genomedb_target db:genomedb|GCF_002967765.1|WP_105332448.1 8 153 evalue:2.4e-47 qcov:93.60 identity:55.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metabolic_acc TIGR03153;
metabolic_process compound:Nitrogen;process:Nitrite reduction;gene:cyt c552 small NrfH;;
metabolic_target db:metabolic.hmm|TIGR03153 evalue:4.8e-47 score:158.6 best_domain_score:158.4 name:TIGR03153;
metacyc_pathway_id PWY-5673; PWY-5674;
metacyc_pathway_name ; nitrate reduction IV (dissimilatory);;
metacyc_pathway_type ; ANAEROBIC-RESPIRATION; Nitrate-Reduction;;
pfam_acc PF03264;
pfam_desc NapC/NirT cytochrome c family, N-terminal region;
pfam_id Cytochrom_NNT;
pfam_target db:Pfam-A.hmm|PF03264.14 evalue:2.1e-13 score:49.6 best_domain_score:40.1 name:Cytochrom_NNT;
sp YES;
sprot_desc Cytochrome c-type protein NrfH;
sprot_id sp|Q9S1E6|NRFH_WOLSU;
sprot_target db:uniprot_sprot|sp|Q9S1E6|NRFH_WOLSU 11 132 evalue:2.9e-12 qcov:78.20 identity:32.50;
tigrfam_acc TIGR03153;
tigrfam_desc cytochrome c nitrite reductase, small subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name cytochr_NrfH;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR03153 evalue:4.8e-47 score:158.6 best_domain_score:158.4 name:TIGR03153;
tm_num 1;
89751 89822 signal_peptide
ID metaerg.pl|06253
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
89751 90221 transmembrane_helix
ID metaerg.pl|06254
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology o89778-89846i;
90205 91758 CDS
ID metaerg.pl|06255
allec_ids 1.7.2.2;
allgo_ids GO:0006807; GO:0042279; GO:0042597; GO:0055114; GO:0005509; GO:0020037; GO:0005506; GO:0042128;
allko_ids K10535; K04013; K03385;
genomedb_OC d__Bacteria;p__Myxococcota;c__Bradimonadia;o__Bradymonadales;f__Bradymonadaceae;g__B210;s__B210 sp003260125;
genomedb_acc GCF_003260125.1;
genomedb_target db:genomedb|GCF_003260125.1|WP_111730073.1 22 491 evalue:3.6e-161 qcov:90.90 identity:58.50;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id PWY-5674; PWY-5673;
metacyc_pathway_name nitrate reduction IV (dissimilatory);; ;
metacyc_pathway_type ANAEROBIC-RESPIRATION; Nitrate-Reduction;; ;
pfam_acc PF13435; PF14522; PF02335;
pfam_desc Cytochrome c554 and c-prime; Cytochrome c7 and related cytochrome c; Cytochrome c552;
pfam_id Cytochrome_C554; Cytochrome_C7; Cytochrom_C552;
pfam_target db:Pfam-A.hmm|PF13435.6 evalue:4.4e-06 score:26.8 best_domain_score:12.7 name:Cytochrome_C554; db:Pfam-A.hmm|PF14522.6 evalue:6.7e-09 score:34.9 best_domain_score:19.1 name:Cytochrome_C7; db:Pfam-A.hmm|PF02335.15 evalue:1.7e-127 score:425.3 best_domain_score:425.0 name:Cytochrom_C552;
sprot_desc Cytochrome c-552;
sprot_id sp|A8ERP8|NRFA_ARCB4;
sprot_target db:uniprot_sprot|sp|A8ERP8|NRFA_ARCB4 26 453 evalue:5.5e-63 qcov:82.80 identity:35.50;
tm_num 1;
90205 91758 transmembrane_helix
ID metaerg.pl|06256
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology i90265-90333o;
92688 91831 CDS
ID metaerg.pl|06257
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K03442;
genomedb_OC d__Bacteria;p__Myxococcota;c__UBA9160;o__UBA9160;f__UBA4427;g__UBA4427;s__UBA4427 sp002390675;
genomedb_acc GCA_002390675.1;
genomedb_target db:genomedb|GCA_002390675.1|DGPZ01000043.1_18 9 277 evalue:1.9e-79 qcov:94.40 identity:55.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00924; PF05552;
pfam_desc Mechanosensitive ion channel; Conserved TM helix;
pfam_id MS_channel; TM_helix;
pfam_target db:Pfam-A.hmm|PF00924.18 evalue:5.3e-52 score:175.6 best_domain_score:175.0 name:MS_channel; db:Pfam-A.hmm|PF05552.12 evalue:5.7e-08 score:31.9 best_domain_score:31.9 name:TM_helix;
sprot_desc Uncharacterized MscS family protein slr0639;
sprot_id sp|Q55717|Y639_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55717|Y639_SYNY3 16 275 evalue:2.8e-53 qcov:91.20 identity:41.20;
tm_num 3;
92688 91831 transmembrane_helix
ID metaerg.pl|06258
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
topology o91882-91950i92011-92079o92089-92157i;
92908 94569 CDS
ID metaerg.pl|06259
genomedb_OC d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Vulgatibacteraceae;g__ZC4RG40;s__ZC4RG40 sp003242475;
genomedb_acc GCA_003242475.1;
genomedb_target db:genomedb|GCA_003242475.1|PZM93747.1 25 544 evalue:1.4e-195 qcov:94.00 identity:64.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00109; PF02801;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain;
pfam_id ketoacyl-synt; Ketoacyl-synt_C;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:4e-19 score:68.4 best_domain_score:51.9 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:1.1e-11 score:44.0 best_domain_score:42.8 name:Ketoacyl-synt_C;
96824 94635 CDS
ID metaerg.pl|06260
allec_ids 6.3.1.2;
allgo_ids GO:0004356; GO:0006807; GO:0045335; GO:0005524; GO:0009617;
allko_ids K01915;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000022.1_52 3 729 evalue:9.6e-293 qcov:99.70 identity:67.10;
kegg_pathway_id 00550; 02020; 00910; 00251;
kegg_pathway_name Peptidoglycan biosynthesis; Two-component system - General; Nitrogen metabolism; Glutamate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
metacyc_pathway_id GLNSYN-PWY; PWY-6549; PWY-5675; PWY-5505; PWY490-3; AMMASSIM-PWY; PWY-381;
metacyc_pathway_name L-glutamine biosynthesis I;; L-glutamine biosynthesis III;; nitrate reduction V (assimilatory);; L-glutamate and L-glutamine biosynthesis;; nitrate reduction VI (assimilatory);; ammonia assimilation cycle III;; nitrate reduction II (assimilatory);;
metacyc_pathway_type Ammonia-Assimilation; GLUTAMINE-SYN;; GLUTAMINE-SYN;; Nitrate-Reduction;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;; Nitrate-Reduction;; Ammonia-Assimilation; Super-Pathways;; Nitrate-Reduction;;
pfam_acc PF00120; PF18318; PF12437;
pfam_desc Glutamine synthetase, catalytic domain; Glutamine synthetase C-terminal domain; Glutamine synthetase type III N terminal;
pfam_id Gln-synt_C; Gln-synt_C-ter; GSIII_N;
pfam_target db:Pfam-A.hmm|PF00120.24 evalue:1.1e-22 score:79.7 best_domain_score:76.8 name:Gln-synt_C; db:Pfam-A.hmm|PF18318.1 evalue:1.2e-37 score:127.6 best_domain_score:126.6 name:Gln-synt_C-ter; db:Pfam-A.hmm|PF12437.8 evalue:3.3e-70 score:234.1 best_domain_score:233.4 name:GSIII_N;
sprot_desc Type-3 glutamine synthetase;
sprot_id sp|Q54WR9|GLNA3_DICDI;
sprot_target db:uniprot_sprot|sp|Q54WR9|GLNA3_DICDI 40 729 evalue:2.0e-183 qcov:94.70 identity:46.70;
96959 98521 CDS
ID metaerg.pl|06261
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000022.1_51 21 516 evalue:4.2e-40 qcov:95.40 identity:31.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
98518 99342 CDS
ID metaerg.pl|06262
allko_ids K12420;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus sp003028415;
genomedb_acc GCF_003028415.1;
genomedb_target db:genomedb|GCF_003028415.1|WP_107137008.1 14 273 evalue:1.7e-64 qcov:94.90 identity:53.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF00106; PF13561; PF08659; PF13460;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain; NAD(P)H-binding;
pfam_id adh_short; adh_short_C2; KR; NAD_binding_10;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2.5e-49 score:166.6 best_domain_score:166.1 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:1.3e-31 score:109.2 best_domain_score:108.9 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:1.7e-13 score:50.1 best_domain_score:49.5 name:KR; db:Pfam-A.hmm|PF13460.6 evalue:1.1e-07 score:31.2 best_domain_score:30.1 name:NAD_binding_10;
100132 99518 CDS
ID metaerg.pl|06263
allgo_ids GO:0003676; GO:0004519;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000104.1_4 10 188 evalue:1.7e-53 qcov:87.70 identity:57.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.215054; 0.776684; 36.2131; 0.0441871; 37.249;
pfam_acc PF02720; PF01844;
pfam_desc Domain of unknown function (DUF222); HNH endonuclease;
pfam_id DUF222; HNH;
pfam_target db:Pfam-A.hmm|PF02720.17 evalue:1.1e-09 score:37.4 best_domain_score:37.0 name:DUF222; db:Pfam-A.hmm|PF01844.23 evalue:4.6e-08 score:32.4 best_domain_score:31.7 name:HNH;
>Feature NODE_39_length_98514_cov_37.6693
1868 36 CDS
ID metaerg.pl|06264
allgo_ids GO:0016020; GO:0016021; GO:0005886; GO:0015450; GO:0065002; GO:0006605; GO:0043952;
allko_ids K03072;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726038.1 1 610 evalue:9.3e-265 qcov:100.00 identity:80.00;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF03176; PF13721; PF02355; PF07549;
pfam_desc MMPL family; SecD export protein N-terminal TM region; Protein export membrane protein; SecD/SecF GG Motif;
pfam_id MMPL; SecD-TM1; SecD_SecF; Sec_GG;
pfam_target db:Pfam-A.hmm|PF03176.15 evalue:3.4e-09 score:35.3 best_domain_score:34.0 name:MMPL; db:Pfam-A.hmm|PF13721.6 evalue:3e-29 score:100.8 best_domain_score:84.3 name:SecD-TM1; db:Pfam-A.hmm|PF02355.16 evalue:6.7e-21 score:73.8 best_domain_score:72.8 name:SecD_SecF; db:Pfam-A.hmm|PF07549.14 evalue:3.5e-07 score:28.8 best_domain_score:27.0 name:Sec_GG;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P0AG91|SECD_ECO57;
sprot_target db:uniprot_sprot|sp|P0AG91|SECD_ECO57 1 610 evalue:2.6e-149 qcov:100.00 identity:49.00;
tigrfam_acc TIGR00916; TIGR01129;
tigrfam_desc protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD;
tigrfam_mainrole Protein fate; Protein fate;
tigrfam_name 2A0604s01; secD;
tigrfam_sub1role Protein and peptide secretion and trafficking; Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00916 evalue:3.8e-73 score:245.1 best_domain_score:245.1 name:TIGR00916; db:TIGRFAMs.hmm|TIGR01129 evalue:4.7e-137 score:456.5 best_domain_score:456.2 name:TIGR01129;
tm_num 5;
36 92 signal_peptide
ID metaerg.pl|06265
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
1868 36 transmembrane_helix
ID metaerg.pl|06266
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology o1377-1436i1440-1508o1521-1589i1674-1742o1752-1820i;
2270 1938 CDS
ID metaerg.pl|06267
allgo_ids GO:0016021; GO:0005886; GO:0015031;
allko_ids K03210;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726039.1 1 109 evalue:9.2e-38 qcov:99.10 identity:74.30;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF02699;
pfam_desc Preprotein translocase subunit;
pfam_id YajC;
pfam_target db:Pfam-A.hmm|PF02699.15 evalue:6.4e-28 score:95.7 best_domain_score:95.4 name:YajC;
sprot_desc Sec translocon accessory complex subunit YajC;
sprot_id sp|P0ADZ9|YAJC_ECO57;
sprot_target db:uniprot_sprot|sp|P0ADZ9|YAJC_ECO57 1 108 evalue:1.1e-16 qcov:98.20 identity:40.40;
tigrfam_acc TIGR00739;
tigrfam_desc preprotein translocase, YajC subunit;
tigrfam_mainrole Protein fate;
tigrfam_name yajC;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00739 evalue:6.8e-28 score:95.7 best_domain_score:95.5 name:TIGR00739;
tm_num 1;
2270 1938 transmembrane_helix
ID metaerg.pl|06268
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology o1995-2054i;
7356 2449 CDS
ID metaerg.pl|06269
allgo_ids GO:0004064;
allko_ids K00368;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726040.1 1 1633 evalue:0.0e+00 qcov:99.90 identity:68.50;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF01731; PF03160; PF10282;
pfam_desc Arylesterase; Calx-beta domain; Lactonase, 7-bladed beta-propeller;
pfam_id Arylesterase; Calx-beta; Lactonase;
pfam_target db:Pfam-A.hmm|PF01731.20 evalue:1.2e-05 score:24.7 best_domain_score:7.8 name:Arylesterase; db:Pfam-A.hmm|PF03160.14 evalue:1.5e-15 score:56.4 best_domain_score:41.2 name:Calx-beta; db:Pfam-A.hmm|PF10282.9 evalue:4.1e-30 score:104.4 best_domain_score:52.1 name:Lactonase;
sp YES;
tigrfam_acc TIGR02276;
tigrfam_desc 40-residue YVTN family beta-propeller repeat;
tigrfam_name beta_rpt_yvtn;
tigrfam_target db:TIGRFAMs.hmm|TIGR02276 evalue:1.7e-09 score:36.7 best_domain_score:9.5 name:TIGR02276;
tm_num 1;
2449 2529 signal_peptide
ID metaerg.pl|06270
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
7356 2449 transmembrane_helix
ID metaerg.pl|06271
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i2467-2535o;
15719 7359 CDS
ID metaerg.pl|06272
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726041.1 13 2786 evalue:0.0e+00 qcov:99.60 identity:76.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
sp YES;
tm_num 1;
7359 7457 signal_peptide
ID metaerg.pl|06273
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
15719 7359 transmembrane_helix
ID metaerg.pl|06274
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i7377-7445o;
17488 15728 CDS
ID metaerg.pl|06275
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726042.1 25 586 evalue:3.1e-265 qcov:95.90 identity:77.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
sp YES;
15728 15805 signal_peptide
ID metaerg.pl|06276
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
18506 17481 CDS
ID metaerg.pl|06277
allgo_ids GO:0003755;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726043.1 2 329 evalue:4.6e-96 qcov:96.20 identity:60.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00639; PF13145; PF13616;
pfam_desc PPIC-type PPIASE domain; PPIC-type PPIASE domain; PPIC-type PPIASE domain;
pfam_id Rotamase; Rotamase_2; Rotamase_3;
pfam_target db:Pfam-A.hmm|PF00639.21 evalue:5.9e-09 score:36.0 best_domain_score:34.9 name:Rotamase; db:Pfam-A.hmm|PF13145.6 evalue:5.6e-13 score:49.0 best_domain_score:48.2 name:Rotamase_2; db:Pfam-A.hmm|PF13616.6 evalue:3.3e-07 score:30.1 best_domain_score:29.2 name:Rotamase_3;
sp YES;
17481 17525 lipoprotein_signal_peptide
ID metaerg.pl|06278
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
33616 18503 CDS
ID metaerg.pl|06279
allgo_ids GO:0004064;
allko_ids K15864; K00368;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726044.1 1 5026 evalue:0.0e+00 qcov:99.80 identity:63.00;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF01731; PF07705; PF01345; PF10282; PF01436; PF08450; PF05753;
pfam_desc Arylesterase; CARDB; Domain of unknown function DUF11; Lactonase, 7-bladed beta-propeller; NHL repeat; SMP-30/Gluconolactonase/LRE-like region; Translocon-associated protein beta (TRAPB);
pfam_id Arylesterase; CARDB; DUF11; Lactonase; NHL; SGL; TRAP_beta;
pfam_target db:Pfam-A.hmm|PF01731.20 evalue:1.2e-14 score:53.4 best_domain_score:8.1 name:Arylesterase; db:Pfam-A.hmm|PF07705.11 evalue:1.5e-10 score:40.5 best_domain_score:13.5 name:CARDB; db:Pfam-A.hmm|PF01345.18 evalue:1.5e-70 score:232.8 best_domain_score:35.5 name:DUF11; db:Pfam-A.hmm|PF10282.9 evalue:2e-139 score:463.9 best_domain_score:45.6 name:Lactonase; db:Pfam-A.hmm|PF01436.21 evalue:3.3e-05 score:23.0 best_domain_score:6.8 name:NHL; db:Pfam-A.hmm|PF08450.12 evalue:2e-23 score:82.5 best_domain_score:13.9 name:SGL; db:Pfam-A.hmm|PF05753.14 evalue:5.9e-09 score:34.8 best_domain_score:10.9 name:TRAP_beta;
sp YES;
tigrfam_acc TIGR01451;
tigrfam_desc conserved repeat domain;
tigrfam_name B_ant_repeat;
tigrfam_target db:TIGRFAMs.hmm|TIGR01451 evalue:2.9e-68 score:224.6 best_domain_score:32.4 name:TIGR01451;
tm_num 1;
18503 18616 signal_peptide
ID metaerg.pl|06280
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
33616 18503 transmembrane_helix
ID metaerg.pl|06281
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i18560-18613o;
36612 33817 CDS
ID metaerg.pl|06282
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K07673; K11265; K05864; K13302; K00924; K05743; K04424; K07682; K03407; K05111; K11623; K04442; K07683; K07778; K08884; K05113; K08810; K11228; K08790; K11912; K08854; K08897; K11889; K01802; K09667; K08848; K05744; K08846; K05105; K04444; K08855; K05103; K05102; K08333; K08282; K08856; K04420; K04421; K08286; K01768; K05112; K08809; K04373; K08792; K05098; K05096; K05097; K05091; K02480; K04445; K04372; K04443; K08847; K01769; K01728; K04367; K02178; K08841; K07675; K13414; K02486; K08853; K04688; K09571; K05688; K13304; K05121; K13303;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726045.1 4 918 evalue:4.1e-248 qcov:98.30 identity:51.30;
kegg_pathway_id 05012; 04150; 01030; 04110; 04020; 04360; 04140; 04640; 00040; 02020; 04010; 04011; 00230; 04510; 04111; 04530;
kegg_pathway_name Parkinson's disease; mTOR signaling pathway; Glycan structures - biosynthesis 1; Cell cycle; Calcium signaling pathway; Axon guidance; Regulation of autophagy; Hematopoietic cell lineage; Pentose and glucuronate interconversions; Two-component system - General; MAPK signaling pathway; MAPK signaling pathway - yeast; Purine metabolism; Focal adhesion; Cell cycle - yeast; Tight junction;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF01636; PF00069; PF07714; PF00515; PF13374; PF13424; PF13428; PF14559; PF07719; PF13176; PF13181; PF17874;
pfam_desc Phosphotransferase enzyme family; Protein kinase domain; Protein tyrosine kinase; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; MalT-like TPR region;
pfam_id APH; Pkinase; Pkinase_Tyr; TPR_1; TPR_10; TPR_12; TPR_14; TPR_19; TPR_2; TPR_7; TPR_8; TPR_MalT;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:1.1e-07 score:31.2 best_domain_score:27.1 name:APH; db:Pfam-A.hmm|PF00069.25 evalue:3.1e-36 score:124.3 best_domain_score:123.7 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:2.1e-29 score:101.8 best_domain_score:101.2 name:Pkinase_Tyr; db:Pfam-A.hmm|PF00515.28 evalue:7.6e-19 score:65.9 best_domain_score:22.4 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:2.9e-44 score:147.0 best_domain_score:31.8 name:TPR_10; db:Pfam-A.hmm|PF13424.6 evalue:2.6e-46 score:155.0 best_domain_score:53.3 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:2.2e-06 score:27.2 best_domain_score:15.2 name:TPR_14; db:Pfam-A.hmm|PF14559.6 evalue:3.8e-13 score:49.0 best_domain_score:17.3 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:4.5e-20 score:69.3 best_domain_score:21.7 name:TPR_2; db:Pfam-A.hmm|PF13176.6 evalue:3.5e-23 score:79.1 best_domain_score:29.1 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:4.3e-11 score:41.4 best_domain_score:15.4 name:TPR_8; db:Pfam-A.hmm|PF17874.1 evalue:2.7e-09 score:36.1 best_domain_score:36.1 name:TPR_MalT;
37163 36609 CDS
ID metaerg.pl|06283
allgo_ids GO:0003700; GO:0006352; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726046.1 4 182 evalue:8.9e-62 qcov:97.30 identity:67.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF08279; PF07638; PF04542; PF04545; PF08281;
pfam_desc HTH domain; ECF sigma factor; Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id HTH_11; Sigma70_ECF; Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF08279.12 evalue:1.5e-05 score:24.1 best_domain_score:22.1 name:HTH_11; db:Pfam-A.hmm|PF07638.11 evalue:2.4e-53 score:180.0 best_domain_score:179.8 name:Sigma70_ECF; db:Pfam-A.hmm|PF04542.14 evalue:9.5e-05 score:21.3 best_domain_score:20.4 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:1.4e-07 score:30.2 best_domain_score:29.0 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:1.9e-09 score:36.3 best_domain_score:36.3 name:Sigma70_r4_2;
tigrfam_acc TIGR02937; TIGR02999;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor, TIGR02999 family;
tigrfam_name sigma70-ECF; Sig-70_X6;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:2.7e-19 score:68.5 best_domain_score:67.8 name:TIGR02937; db:TIGRFAMs.hmm|TIGR02999 evalue:5.5e-62 score:208.0 best_domain_score:207.9 name:TIGR02999;
38473 37343 CDS
ID metaerg.pl|06284
allec_ids 2.4.2.29;
allgo_ids GO:0006400; GO:0016763; GO:0046872; GO:0008479; GO:0008616; GO:0101030;
allko_ids K00773;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726047.1 8 375 evalue:4.3e-180 qcov:97.90 identity:83.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF01702;
pfam_desc Queuine tRNA-ribosyltransferase;
pfam_id TGT;
pfam_target db:Pfam-A.hmm|PF01702.18 evalue:5.1e-152 score:505.3 best_domain_score:505.0 name:TGT;
sprot_desc Queuine tRNA-ribosyltransferase;
sprot_id sp|B8GTQ4|TGT_THISH;
sprot_target db:uniprot_sprot|sp|B8GTQ4|TGT_THISH 8 375 evalue:4.3e-158 qcov:97.90 identity:73.40;
tigrfam_acc TIGR00430; TIGR00449;
tigrfam_desc tRNA-guanine transglycosylase; tRNA-guanine family transglycosylase;
tigrfam_mainrole Protein synthesis; Protein synthesis;
tigrfam_name Q_tRNA_tgt; tgt_general;
tigrfam_sub1role tRNA and rRNA base modification; tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00430 evalue:2.4e-164 score:545.8 best_domain_score:545.6 name:TIGR00430; db:TIGRFAMs.hmm|TIGR00449 evalue:7.4e-158 score:524.4 best_domain_score:524.1 name:TIGR00449;
39616 38585 CDS
ID metaerg.pl|06285
allec_ids 2.4.99.17;
allgo_ids GO:0008616; GO:0016740; GO:0016853; GO:0005737;
allko_ids K07568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727064.1 1 339 evalue:5.1e-135 qcov:98.80 identity:70.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF02547;
pfam_desc Queuosine biosynthesis protein;
pfam_id Queuosine_synth;
pfam_target db:Pfam-A.hmm|PF02547.15 evalue:2.1e-128 score:427.2 best_domain_score:427.1 name:Queuosine_synth;
sprot_desc S-adenosylmethionine:tRNA ribosyltransferase-isomerase;
sprot_id sp|Q0A9C4|QUEA_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0A9C4|QUEA_ALKEH 1 341 evalue:7.2e-120 qcov:99.40 identity:63.90;
tigrfam_acc TIGR00113;
tigrfam_desc S-adenosylmethionine:tRNA ribosyltransferase-isomerase;
tigrfam_mainrole Protein synthesis;
tigrfam_name queA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00113 evalue:5.2e-130 score:432.5 best_domain_score:432.4 name:TIGR00113;
39733 40752 CDS
ID metaerg.pl|06286
allec_ids 4.1.1.45;
allgo_ids GO:0016787; GO:0005737; GO:0005829; GO:0001760; GO:0046872; GO:1904985; GO:0019748;
allko_ids K03392;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726048.1 1 336 evalue:1.5e-160 qcov:99.10 identity:79.50;
kegg_pathway_id 00380;
kegg_pathway_name Tryptophan metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
metacyc_pathway_id TRYPTOPHAN-DEGRADATION-1; PWY-5652; PWY-6309; PWY-5654;
metacyc_pathway_name L-tryptophan degradation III (eukaryotic);; 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA;; L-tryptophan degradation XI (mammalian, via kynurenine);; 2-amino-3-carboxymuconate semialdehyde degradation to 2-hydroxypentadienoate;;
metacyc_pathway_type Super-Pathways; TRYPTOPHAN-DEG;; CARBOXYLATES-DEG;; Super-Pathways; TRYPTOPHAN-DEG;; CARBOXYLATES-DEG;;
pfam_acc PF04909;
pfam_desc Amidohydrolase;
pfam_id Amidohydro_2;
pfam_target db:Pfam-A.hmm|PF04909.14 evalue:7.2e-49 score:166.3 best_domain_score:166.2 name:Amidohydro_2;
sprot_desc 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase;
sprot_id sp|Q54LN9|ACMSD_DICDI;
sprot_target db:uniprot_sprot|sp|Q54LN9|ACMSD_DICDI 7 335 evalue:3.5e-103 qcov:97.10 identity:53.70;
40749 41525 CDS
ID metaerg.pl|06287
allgo_ids GO:0004061; GO:0019441;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726049.1 5 258 evalue:8.7e-71 qcov:98.40 identity:53.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF04199;
pfam_desc Putative cyclase;
pfam_id Cyclase;
pfam_target db:Pfam-A.hmm|PF04199.13 evalue:3.8e-09 score:36.1 best_domain_score:35.6 name:Cyclase;
41522 42772 CDS
ID metaerg.pl|06288
allec_ids 3.7.1.3;
allgo_ids GO:0005737; GO:0030429; GO:0030170; GO:0034354; GO:0043420; GO:0097053; GO:0019805; GO:0006569;
allko_ids K01556;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726050.1 1 413 evalue:3.1e-195 qcov:99.30 identity:76.80;
kegg_pathway_id 00380;
kegg_pathway_name Tryptophan metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
metacyc_pathway_id PWY-3502; PWY-2504; TRYPTOPHAN-DEGRADATION-1; TRPCAT-PWY; NADSYN-PWY; PWY-5651; PWY-6309;
metacyc_pathway_name superpathway of NAD biosynthesis in eukaryotes;; superpathway of aromatic compound degradation via 3-oxoadipate;; L-tryptophan degradation III (eukaryotic);; L-tryptophan degradation I (via anthranilate);; NAD de novo biosynthesis II (from tryptophan);; L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde;; L-tryptophan degradation XI (mammalian, via kynurenine);;
metacyc_pathway_type NAD-SYN; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TRYPTOPHAN-DEG;; TRYPTOPHAN-DEG;; NAD-SYN; Super-Pathways;; TRYPTOPHAN-DEG;; Super-Pathways; TRYPTOPHAN-DEG;;
pfam_acc PF00266;
pfam_desc Aminotransferase class-V;
pfam_id Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:1.8e-14 score:52.7 best_domain_score:51.6 name:Aminotran_5;
sprot_desc Kynureninase;
sprot_id sp|B2SIT8|KYNU_XANOP;
sprot_target db:uniprot_sprot|sp|B2SIT8|KYNU_XANOP 16 411 evalue:9.6e-135 qcov:95.20 identity:59.20;
tigrfam_acc TIGR01814;
tigrfam_desc kynureninase;
tigrfam_mainrole Energy metabolism;
tigrfam_name kynureninase;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01814 evalue:1e-129 score:432.1 best_domain_score:431.9 name:TIGR01814;
42765 44126 CDS
ID metaerg.pl|06289
allec_ids 1.14.13.9;
allgo_ids GO:0016491; GO:0055114; GO:0071949; GO:0004502; GO:0034354; GO:0043420; GO:0019805; GO:0006569;
allko_ids K00486;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726051.1 9 449 evalue:6.0e-168 qcov:97.40 identity:69.60;
kegg_pathway_id 00380;
kegg_pathway_name Tryptophan metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
metacyc_pathway_id TRYPTOPHAN-DEGRADATION-1; PWY-5651; PWY-6309; NADSYN-PWY; PWY-3502;
metacyc_pathway_name L-tryptophan degradation III (eukaryotic);; L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde;; L-tryptophan degradation XI (mammalian, via kynurenine);; NAD de novo biosynthesis II (from tryptophan);; superpathway of NAD biosynthesis in eukaryotes;;
metacyc_pathway_type Super-Pathways; TRYPTOPHAN-DEG;; TRYPTOPHAN-DEG;; Super-Pathways; TRYPTOPHAN-DEG;; NAD-SYN; Super-Pathways;; NAD-SYN; Super-Pathways;;
pfam_acc PF01266; PF01494; PF13450; PF04820;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; NAD(P)-binding Rossmann-like domain; Tryptophan halogenase;
pfam_id DAO; FAD_binding_3; NAD_binding_8; Trp_halogenase;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:1e-10 score:41.0 best_domain_score:23.5 name:DAO; db:Pfam-A.hmm|PF01494.19 evalue:6.7e-31 score:107.0 best_domain_score:106.6 name:FAD_binding_3; db:Pfam-A.hmm|PF13450.6 evalue:1.4e-06 score:27.7 best_domain_score:25.8 name:NAD_binding_8; db:Pfam-A.hmm|PF04820.14 evalue:6.8e-06 score:24.4 best_domain_score:7.7 name:Trp_halogenase;
sprot_desc Kynurenine 3-monooxygenase;
sprot_id sp|B2FL98|KMO_STRMK;
sprot_target db:uniprot_sprot|sp|B2FL98|KMO_STRMK 12 441 evalue:1.7e-121 qcov:94.90 identity:53.90;
tm_num 1;
42765 44126 transmembrane_helix
ID metaerg.pl|06290
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i42783-42851o;
44123 44818 CDS
ID metaerg.pl|06291
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726052.1 14 227 evalue:5.6e-45 qcov:92.60 identity:49.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF09335;
pfam_desc SNARE associated Golgi protein;
pfam_id SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF09335.11 evalue:3.4e-20 score:72.0 best_domain_score:72.0 name:SNARE_assoc;
sprot_desc TVP38/TMEM64 family membrane protein slr0305;
sprot_id sp|Q55909|Y305_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55909|Y305_SYNY3 30 223 evalue:2.9e-08 qcov:84.00 identity:30.70;
tm_num 6;
44123 44818 transmembrane_helix
ID metaerg.pl|06292
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i44147-44215o44258-44326i44345-44413o44516-44584i44603-44671o44729-44797i;
46217 44856 CDS
ID metaerg.pl|06293
allec_ids 1.8.1.7;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0009055; GO:0050660; GO:0004362; GO:0004791; GO:0045454;
allko_ids K00356; K03885; K00382; K00266; K01008; K00529; K00383; K00384;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726056.1 1 451 evalue:6.4e-202 qcov:99.60 identity:76.50;
kegg_pathway_id 00260; 00020; 00240; 00010; 00480; 00280; 00071; 00190; 00360; 00910; 00450; 00620; 00251; 00252;
kegg_pathway_name Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle); Pyrimidine metabolism; Glycolysis / Gluconeogenesis; Glutathione metabolism; Valine, leucine and isoleucine degradation; Fatty acid metabolism; Oxidative phosphorylation; Phenylalanine metabolism; Nitrogen metabolism; Selenoamino acid metabolism; Pyruvate metabolism; Glutamate metabolism; Alanine and aspartate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
metacyc_pathway_id GLUT-REDOX-PWY; PWY-4081;
metacyc_pathway_name glutathione-glutaredoxin redox reactions;; glutathione-peroxide redox reactions;;
metacyc_pathway_type Reductants;; Reductants;;
pfam_acc PF00070; PF07992; PF13738; PF02852;
pfam_desc Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id Pyr_redox; Pyr_redox_2; Pyr_redox_3; Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF00070.27 evalue:3.7e-21 score:74.7 best_domain_score:69.5 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.5e-65 score:220.6 best_domain_score:220.3 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:2.5e-13 score:49.2 best_domain_score:44.6 name:Pyr_redox_3; db:Pfam-A.hmm|PF02852.22 evalue:2.3e-34 score:117.2 best_domain_score:116.4 name:Pyr_redox_dim;
sprot_desc Glutathione reductase;
sprot_id sp|P23189|GSHR_PSEAE;
sprot_target db:uniprot_sprot|sp|P23189|GSHR_PSEAE 5 448 evalue:2.4e-139 qcov:98.00 identity:57.80;
tigrfam_acc TIGR01424;
tigrfam_desc glutathione-disulfide reductase;
tigrfam_mainrole Energy metabolism;
tigrfam_name gluta_reduc_2;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01424 evalue:6.7e-196 score:650.3 best_domain_score:650.1 name:TIGR01424;
46358 46834 CDS
ID metaerg.pl|06294
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__Lewinella_A;s__Lewinella_A xylanilytica;
genomedb_acc GCF_002934605.1;
genomedb_target db:genomedb|GCF_002934605.1|WP_104419407.1 13 140 evalue:6.8e-10 qcov:81.00 identity:34.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF11697;
pfam_desc Protein of unknown function (DUF3293);
pfam_id DUF3293;
pfam_target db:Pfam-A.hmm|PF11697.8 evalue:1.3e-08 score:34.4 best_domain_score:33.7 name:DUF3293;
46831 47436 CDS
ID metaerg.pl|06295
allec_ids 7.6.2.5; 3.6.3.41;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0103115; GO:0017004;
allko_ids K01995; K02193; K02006; K06861; K01996; K02045;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726057.1 5 192 evalue:4.5e-59 qcov:93.50 identity:62.80;
kegg_pathway_id 00910; 02010;
kegg_pathway_name Nitrogen metabolism; ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1e-08 score:34.6 best_domain_score:21.8 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:6.4e-22 score:77.8 best_domain_score:77.0 name:ABC_tran;
sprot_desc Cytochrome c biogenesis ATP-binding export protein CcmA;
sprot_id sp|Q2YNU0|CCMA_BRUA2;
sprot_target db:uniprot_sprot|sp|Q2YNU0|CCMA_BRUA2 5 177 evalue:6.7e-33 qcov:86.10 identity:42.90;
tigrfam_acc TIGR01189;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:1.5e-57 score:193.7 best_domain_score:193.0 name:TIGR01189;
47433 48104 CDS
ID metaerg.pl|06296
allgo_ids GO:0015232; GO:0015886; GO:0016020; GO:0017004; GO:0043190;
allko_ids K02194;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726058.1 1 223 evalue:4.7e-89 qcov:100.00 identity:79.80;
kegg_pathway_id 02010; 00910;
kegg_pathway_name ABC transporters - General; Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF03379;
pfam_desc CcmB protein;
pfam_id CcmB;
pfam_target db:Pfam-A.hmm|PF03379.13 evalue:8.1e-67 score:224.1 best_domain_score:223.9 name:CcmB;
sprot_desc Heme exporter protein B;
sprot_id sp|Q9I3N6|CCMB_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I3N6|CCMB_PSEAE 9 222 evalue:4.5e-46 qcov:96.00 identity:49.10;
tigrfam_acc TIGR01190;
tigrfam_desc heme exporter protein CcmB;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01190 evalue:2.9e-67 score:225.5 best_domain_score:225.4 name:TIGR01190;
tm_num 6;
47433 48104 transmembrane_helix
ID metaerg.pl|06297
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i47493-47561o47571-47639i47730-47798o47826-47894i47913-47981o48024-48092i;
48101 48850 CDS
ID metaerg.pl|06298
allgo_ids GO:0017004; GO:0020037; GO:0016021; GO:0005886; GO:0015232;
allko_ids K02195;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726059.1 1 248 evalue:1.3e-119 qcov:99.60 identity:82.30;
kegg_pathway_id 00910; 02010;
kegg_pathway_name Nitrogen metabolism; ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF01578;
pfam_desc Cytochrome C assembly protein;
pfam_id Cytochrom_C_asm;
pfam_target db:Pfam-A.hmm|PF01578.20 evalue:1e-28 score:99.8 best_domain_score:99.2 name:Cytochrom_C_asm;
sprot_desc Heme exporter protein C;
sprot_id sp|P0ABM3|CCMC_ECO57;
sprot_target db:uniprot_sprot|sp|P0ABM3|CCMC_ECO57 2 247 evalue:5.9e-63 qcov:98.80 identity:47.60;
tigrfam_acc TIGR01191;
tigrfam_desc heme exporter protein CcmC;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01191 evalue:9.4e-72 score:240.0 best_domain_score:239.7 name:TIGR01191;
tm_num 6;
48101 48850 transmembrane_helix
ID metaerg.pl|06299
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i48179-48247o48305-48373i48392-48460o48503-48562i48596-48664o48722-48778i;
49006 49494 CDS
ID metaerg.pl|06300
allgo_ids GO:0017003; GO:0017004; GO:0020037; GO:0016021; GO:0005886; GO:0046872;
allko_ids K02197;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726060.1 1 149 evalue:1.2e-41 qcov:92.00 identity:60.40;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF03100;
pfam_desc CcmE;
pfam_id CcmE;
pfam_target db:Pfam-A.hmm|PF03100.15 evalue:6.6e-42 score:141.8 best_domain_score:141.5 name:CcmE;
sp YES;
sprot_desc Cytochrome c-type biogenesis protein CcmE;
sprot_id sp|A4XW26|CCME_PSEMY;
sprot_target db:uniprot_sprot|sp|A4XW26|CCME_PSEMY 1 141 evalue:9.8e-35 qcov:87.00 identity:51.80;
tm_num 1;
49006 49083 signal_peptide
ID metaerg.pl|06301
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
49006 49494 transmembrane_helix
ID metaerg.pl|06302
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i49030-49098o;
49491 51464 CDS
ID metaerg.pl|06303
allgo_ids GO:0017004; GO:0020037; GO:0016021; GO:0005886; GO:0015232;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726061.1 1 642 evalue:4.8e-283 qcov:97.70 identity:76.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF16327; PF01578;
pfam_desc Cytochrome c-type biogenesis protein CcmF C-terminal; Cytochrome C assembly protein;
pfam_id CcmF_C; Cytochrom_C_asm;
pfam_target db:Pfam-A.hmm|PF16327.5 evalue:1e-111 score:372.5 best_domain_score:372.5 name:CcmF_C; db:Pfam-A.hmm|PF01578.20 evalue:5.1e-49 score:166.2 best_domain_score:166.2 name:Cytochrom_C_asm;
sprot_desc Cytochrome c-type biogenesis protein CcmF;
sprot_id sp|P52225|CCMF_PSEFL;
sprot_target db:uniprot_sprot|sp|P52225|CCMF_PSEFL 2 652 evalue:1.1e-185 qcov:99.10 identity:52.80;
tigrfam_acc TIGR00353;
tigrfam_desc cytochrome c-type biogenesis protein CcmF;
tigrfam_mainrole Energy metabolism;
tigrfam_name nrfE;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR00353 evalue:6.1e-218 score:724.5 best_domain_score:723.9 name:TIGR00353;
tm_num 15;
49491 51464 transmembrane_helix
ID metaerg.pl|06304
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology o49503-49571i49608-49676o49773-49832i49851-49919o50016-50084i50118-50186o50229-50282i50301-50369o50427-50486i50547-50615o50658-50726i50763-50831o50841-50900i50937-51005o51321-51380i;
51461 52000 CDS
ID metaerg.pl|06305
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0016021; GO:0030288; GO:0005886; GO:0015036; GO:0045454; GO:0017004;
allko_ids K11065; K02199;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726062.1 4 179 evalue:8.7e-70 qcov:98.30 identity:68.20;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:2.7e-13 score:49.1 best_domain_score:48.8 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:4.2e-13 score:48.5 best_domain_score:48.2 name:Redoxin;
sp YES;
sprot_desc Thiol:disulfide interchange protein DsbE;
sprot_id sp|Q46476|DSBE_ALLVD;
sprot_target db:uniprot_sprot|sp|Q46476|DSBE_ALLVD 3 170 evalue:3.8e-40 qcov:93.90 identity:45.20;
tigrfam_acc TIGR00385;
tigrfam_desc periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily;
tigrfam_mainrole Protein fate;
tigrfam_name dsbE;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR00385 evalue:1.4e-46 score:157.4 best_domain_score:157.2 name:TIGR00385;
tm_num 1;
51461 51541 signal_peptide
ID metaerg.pl|06306
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
51461 52000 transmembrane_helix
ID metaerg.pl|06307
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology o51473-51526i;
51997 52530 CDS
ID metaerg.pl|06308
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF03918;
pfam_desc Cytochrome C biogenesis protein;
pfam_id CcmH;
pfam_target db:Pfam-A.hmm|PF03918.14 evalue:2.1e-43 score:146.3 best_domain_score:143.5 name:CcmH;
sp YES;
tm_num 2;
51997 52089 signal_peptide
ID metaerg.pl|06309
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
51997 52530 transmembrane_helix
ID metaerg.pl|06310
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i52015-52083o52438-52506i;
52527 53714 CDS
ID metaerg.pl|06311
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726064.1 5 389 evalue:4.7e-100 qcov:97.50 identity:54.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00515; PF13431; PF07719;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_17; TPR_2;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:4e-08 score:32.0 best_domain_score:24.4 name:TPR_1; db:Pfam-A.hmm|PF13431.6 evalue:3.4e-06 score:26.3 best_domain_score:12.7 name:TPR_17; db:Pfam-A.hmm|PF07719.17 evalue:7.4e-07 score:28.1 best_domain_score:19.3 name:TPR_2;
tm_num 2;
52527 53714 transmembrane_helix
ID metaerg.pl|06312
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology o52536-52604i52743-52811o;
53789 54469 CDS
ID metaerg.pl|06313
allko_ids K07220;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726065.1 1 226 evalue:7.3e-98 qcov:100.00 identity:77.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF01865;
pfam_desc Protein of unknown function DUF47;
pfam_id PhoU_div;
pfam_target db:Pfam-A.hmm|PF01865.16 evalue:1.3e-50 score:171.0 best_domain_score:170.8 name:PhoU_div;
sprot_desc hypothetical protein;
sprot_id sp|P44271|Y1603_HAEIN;
sprot_target db:uniprot_sprot|sp|P44271|Y1603_HAEIN 10 226 evalue:4.1e-55 qcov:96.00 identity:47.90;
tigrfam_acc TIGR00153;
tigrfam_desc TIGR00153 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00153;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00153 evalue:4.6e-49 score:166.2 best_domain_score:166.0 name:TIGR00153;
54493 55743 CDS
ID metaerg.pl|06314
allgo_ids GO:0005315; GO:0006817; GO:0016020; GO:0005887; GO:0035435;
allko_ids K03306;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169908.1 18 412 evalue:6.3e-172 qcov:95.00 identity:80.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF01384;
pfam_desc Phosphate transporter family;
pfam_id PHO4;
pfam_target db:Pfam-A.hmm|PF01384.20 evalue:2.3e-109 score:364.8 best_domain_score:364.4 name:PHO4;
sp YES;
sprot_desc Putative phosphate permease HI_1604;
sprot_id sp|P45268|Y1604_HAEIN;
sprot_target db:uniprot_sprot|sp|P45268|Y1604_HAEIN 10 412 evalue:1.9e-106 qcov:96.90 identity:52.80;
tm_num 12;
54493 54564 signal_peptide
ID metaerg.pl|06315
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
54493 55743 transmembrane_helix
ID metaerg.pl|06316
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology o54505-54564i54625-54684o54742-54801i54835-54903o54913-54981i55018-55086o55129-55197i55234-55302o55381-55449i55504-55572o55582-55650i55669-55737o;
55983 57491 CDS
ID metaerg.pl|06317
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38010.1 9 502 evalue:1.1e-125 qcov:98.40 identity:51.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF05922; PF00082;
pfam_desc Peptidase inhibitor I9; Subtilase family;
pfam_id Inhibitor_I9; Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF05922.16 evalue:5.9e-09 score:35.7 best_domain_score:34.6 name:Inhibitor_I9; db:Pfam-A.hmm|PF00082.22 evalue:2.9e-33 score:114.7 best_domain_score:113.5 name:Peptidase_S8;
sp YES;
55983 56039 signal_peptide
ID metaerg.pl|06318
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
57699 59144 CDS
ID metaerg.pl|06319
allgo_ids GO:0000155; GO:0000160; GO:0016021; GO:0046983;
allko_ids K07769; K14509; K02486; K11383; K02342; K10125; K02476; K11357; K11617; K04757; K10942; K07647; K07680; K07675; K11637; K01769; K06379; K07676; K10681; K07709; K07644; K02480; K02482; K08801; K07636; K07653; K07638; K07701; K02030; K11527; K13587; K07678; K03388; K02668; K08479; K07674; K11614; K07716; K02489; K07697; K07656; K01768; K07710; K07645; K07677; K07708; K08282; K07704; K11231; K01090; K02491; K11711; K07642; K02484; K04486; K11640; K02575; K07768; K07778; K11354; K07683; K13533; K07711; K08884; K07648; K07679; K02478; K07718; K07698; K07651; K11623; K00936; K07682; K07777; K07654; K03407; K07639; K08475; K07673; K01120; K13598; K07641; K07646; K07652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38009.1 16 478 evalue:1.5e-153 qcov:96.30 identity:55.90;
kegg_pathway_id 03030; 05111; 00230; 00340; 00790; 03090; 04011; 02020;
kegg_pathway_name DNA replication; Vibrio cholerae pathogenic cycle; Purine metabolism; Histidine metabolism; Folate biosynthesis; Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF02518; PF13581; PF07730; PF00989; PF13596; PF14598; PF08447; PF08448; PF13188; PF13426;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-like ATPase domain; Histidine kinase; PAS fold; PAS domain; PAS domain; PAS fold; PAS fold; PAS domain; PAS domain;
pfam_id HATPase_c; HATPase_c_2; HisKA_3; PAS; PAS_10; PAS_11; PAS_3; PAS_4; PAS_8; PAS_9;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.2e-09 score:37.8 best_domain_score:36.3 name:HATPase_c; db:Pfam-A.hmm|PF13581.6 evalue:5.9e-07 score:28.7 best_domain_score:27.6 name:HATPase_c_2; db:Pfam-A.hmm|PF07730.13 evalue:4.5e-17 score:61.6 best_domain_score:59.6 name:HisKA_3; db:Pfam-A.hmm|PF00989.25 evalue:5.8e-15 score:54.5 best_domain_score:27.1 name:PAS; db:Pfam-A.hmm|PF13596.6 evalue:7.3e-06 score:25.8 best_domain_score:21.1 name:PAS_10; db:Pfam-A.hmm|PF14598.6 evalue:8e-08 score:31.6 best_domain_score:28.6 name:PAS_11; db:Pfam-A.hmm|PF08447.12 evalue:1.7e-16 score:59.5 best_domain_score:54.4 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:3.9e-20 score:71.4 best_domain_score:35.2 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:7.8e-10 score:37.8 best_domain_score:23.7 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:3.7e-16 score:58.5 best_domain_score:31.5 name:PAS_9;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:3.9e-28 score:97.3 best_domain_score:60.5 name:TIGR00229;
59141 59770 CDS
ID metaerg.pl|06320
allgo_ids GO:0006355; GO:0003677; GO:0009405; GO:0000160; GO:1900233;
allko_ids K03407; K07654; K07682; K07652; K07641; K07646; K07639; K07673; K01120; K07778; K07768; K07651; K07718; K02478; K07648; K07642; K11711; K11640; K02484; K07704; K08282; K07677; K07708; K11231; K07674; K08479; K10916; K02668; K03388; K07710; K02489; K07716; K07653; K07636; K02482; K02480; K10715; K07678; K11527; K06379; K10681; K07676; K01769; K07644; K07709; K11617; K04757; K10125; K11357; K12767; K02486; K07675; K07647; K07689;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38008.1 1 209 evalue:1.5e-76 qcov:100.00 identity:69.90;
kegg_pathway_id 04011; 02020; 03090; 00790; 05111; 00230;
kegg_pathway_name MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Folate biosynthesis; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00196; PF00072; PF04545;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain; Sigma-70, region 4;
pfam_id GerE; Response_reg; Sigma70_r4;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:7.7e-18 score:63.0 best_domain_score:59.6 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:1.7e-27 score:95.1 best_domain_score:94.2 name:Response_reg; db:Pfam-A.hmm|PF04545.16 evalue:5.3e-06 score:25.1 best_domain_score:23.8 name:Sigma70_r4;
sprot_desc Response regulator GacA;
sprot_id sp|Q51373|GACA_PSEAE;
sprot_target db:uniprot_sprot|sp|Q51373|GACA_PSEAE 1 208 evalue:2.9e-39 qcov:99.50 identity:36.40;
59767 60843 CDS
ID metaerg.pl|06321
allgo_ids GO:0016757;
allko_ids K00749; K03844;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Chromatocurvus;s__Chromatocurvus sp002868715;
genomedb_acc GCF_002868715.1;
genomedb_target db:genomedb|GCF_002868715.1|WP_101522758.1 1 349 evalue:2.0e-129 qcov:97.50 identity:64.50;
kegg_pathway_id 00510; 01030;
kegg_pathway_name N-Glycan biosynthesis; Glycan structures - biosynthesis 1;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF12038;
pfam_desc Domain of unknown function (DUF3524);
pfam_id DUF3524;
pfam_target db:Pfam-A.hmm|PF12038.8 evalue:8.1e-57 score:190.9 best_domain_score:190.3 name:DUF3524;
sprot_desc Glycosyltransferase-like domain-containing protein 1-like;
sprot_id sp|Q9VXN0|GTDC1_DROME;
sprot_target db:uniprot_sprot|sp|Q9VXN0|GTDC1_DROME 1 305 evalue:3.7e-42 qcov:85.20 identity:31.70;
61748 60813 CDS
ID metaerg.pl|06322
allgo_ids GO:0005887;
allko_ids K07058;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio;s__Thioalkalivibrio sp000377905;
genomedb_acc GCF_000377905.1;
genomedb_target db:genomedb|GCF_000377905.1|WP_018949579.1 9 310 evalue:4.5e-122 qcov:97.10 identity:78.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF03631;
pfam_desc Virulence factor BrkB;
pfam_id Virul_fac_BrkB;
pfam_target db:Pfam-A.hmm|PF03631.15 evalue:7.6e-54 score:182.3 best_domain_score:182.1 name:Virul_fac_BrkB;
sprot_desc hypothetical protein;
sprot_id sp|A9IT56|Y3042_BORPD;
sprot_target db:uniprot_sprot|sp|A9IT56|Y3042_BORPD 19 280 evalue:6.3e-06 qcov:84.20 identity:28.20;
tigrfam_acc TIGR00765;
tigrfam_desc YihY family inner membrane protein;
tigrfam_mainrole Unknown function;
tigrfam_name yihY_not_rbn;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00765 evalue:1.3e-28 score:99.7 best_domain_score:99.3 name:TIGR00765;
tm_num 7;
61748 60813 transmembrane_helix
ID metaerg.pl|06323
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i60849-60902o60930-60998i61107-61175o61257-61325i61383-61451o61479-61547i61584-61652o;
61818 62564 CDS
ID metaerg.pl|06324
allgo_ids GO:0016787;
allko_ids K01656; K01663; K01665; K01664; K01657; K02619; K03342; K13501; K01658; K01951; K13497; K13950;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Luteimonas;s__Luteimonas sp002849595;
genomedb_acc GCF_002849595.1;
genomedb_target db:genomedb|GCF_002849595.1|WP_101926956.1 1 248 evalue:3.7e-71 qcov:100.00 identity:55.60;
kegg_pathway_id 00620; 00983; 00251; 02020; 00790; 00230; 00400;
kegg_pathway_name Pyruvate metabolism; Drug metabolism - other enzymes; Glutamate metabolism; Two-component system - General; Folate biosynthesis; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00117; PF07722;
pfam_desc Glutamine amidotransferase class-I; Peptidase C26;
pfam_id GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00117.28 evalue:8.7e-15 score:54.2 best_domain_score:53.7 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:1.2e-06 score:27.7 best_domain_score:26.4 name:Peptidase_C26;
62564 63406 CDS
ID metaerg.pl|06325
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Ga0077538;s__Ga0077538 sp001464155;
genomedb_acc GCA_001464155.1;
genomedb_target db:genomedb|GCA_001464155.1|LNEN01000040.1_8 9 280 evalue:1.6e-38 qcov:97.10 identity:36.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF12412;
pfam_desc Protein of unknown function (DUF3667);
pfam_id DUF3667;
pfam_target db:Pfam-A.hmm|PF12412.8 evalue:5.8e-16 score:57.0 best_domain_score:57.0 name:DUF3667;
tm_num 5;
62564 63406 transmembrane_helix
ID metaerg.pl|06326
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i62801-62854o63020-63073i63110-63178o63221-63280i63299-63367o;
65062 63422 CDS
ID metaerg.pl|06327
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085; GO:0005887; GO:0015648; GO:0071555; GO:0034204; GO:0015836; GO:0009252; GO:0008360;
allko_ids K03980;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727065.1 19 536 evalue:9.1e-203 qcov:94.90 identity:71.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF01554; PF03023; PF13440;
pfam_desc MatE; Lipid II flippase MurJ; Polysaccharide biosynthesis protein;
pfam_id MatE; MurJ; Polysacc_synt_3;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:3.3e-07 score:29.3 best_domain_score:18.4 name:MatE; db:Pfam-A.hmm|PF03023.14 evalue:6e-130 score:433.1 best_domain_score:430.6 name:MurJ; db:Pfam-A.hmm|PF13440.6 evalue:3.8e-08 score:32.1 best_domain_score:32.1 name:Polysacc_synt_3;
sprot_desc Probable lipid II flippase MurJ;
sprot_id sp|P37169|MURJ_SALTY;
sprot_target db:uniprot_sprot|sp|P37169|MURJ_SALTY 7 537 evalue:1.2e-113 qcov:97.30 identity:44.10;
tigrfam_acc TIGR01695;
tigrfam_desc murein biosynthesis integral membrane protein MurJ;
tigrfam_mainrole Cell envelope;
tigrfam_name murJ_mviN;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01695 evalue:6.8e-132 score:439.9 best_domain_score:436.7 name:TIGR01695;
tm_num 14;
65062 63422 transmembrane_helix
ID metaerg.pl|06328
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i63440-63508o63518-63574i63710-63778o63836-63904i63908-63976o64004-64063i64148-64216o64259-64312i64373-64441o64484-64552i64589-64657o64715-64783i64820-64888o64931-64999i;
65146 65412 CDS
ID metaerg.pl|06329
allgo_ids GO:0003723; GO:0003735; GO:0005622; GO:0005840; GO:0006412;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726070.1 1 88 evalue:3.9e-31 qcov:100.00 identity:86.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF01649;
pfam_desc Ribosomal protein S20;
pfam_id Ribosomal_S20p;
pfam_target db:Pfam-A.hmm|PF01649.18 evalue:6.4e-27 score:93.2 best_domain_score:93.1 name:Ribosomal_S20p;
tigrfam_acc TIGR00029;
tigrfam_desc ribosomal protein bS20;
tigrfam_mainrole Protein synthesis;
tigrfam_name S20;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00029 evalue:1.6e-26 score:91.8 best_domain_score:91.7 name:TIGR00029;
66077 65469 CDS
ID metaerg.pl|06330
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727066.1 18 201 evalue:5.4e-76 qcov:91.10 identity:73.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF13511; PF01464;
pfam_desc Domain of unknown function (DUF4124); Transglycosylase SLT domain;
pfam_id DUF4124; SLT;
pfam_target db:Pfam-A.hmm|PF13511.6 evalue:3.8e-08 score:32.8 best_domain_score:31.8 name:DUF4124; db:Pfam-A.hmm|PF01464.20 evalue:4.1e-27 score:93.4 best_domain_score:93.0 name:SLT;
sp YES;
tm_num 1;
65469 65543 signal_peptide
ID metaerg.pl|06331
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
66077 65469 transmembrane_helix
ID metaerg.pl|06332
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i65487-65555o;
66838 66080 CDS
ID metaerg.pl|06333
allec_ids 1.1.1.-;
allgo_ids GO:0005829; GO:0016491;
allko_ids K08081;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726072.1 1 252 evalue:3.2e-110 qcov:100.00 identity:81.00;
kegg_pathway_id 00960;
kegg_pathway_name Alkaloid biosynthesis II;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
metacyc_pathway_id PWY-6577; TOLSULFDEG-PWY; ECASYN-PWY; PWY-5048; PWY-5789; PWY-481; PWY-882; PWY-5327; PWY-6419; SUCROSEUTIL2-PWY; PWY-1186; PWY-6516; PWY1A0-6325; PWY-321; 4TOLCARBDEG-PWY; CENTBENZCOA-PWY; LYSDEGII-PWY; PWY-6575; PWY-6501; PWY-5197; BENZCOA-PWY; PWY-5184; P302-PWY; PWY-5392; PWY-5516; PWY-5195; PWY-5466; PWY-5972;
metacyc_pathway_name farnesylcysteine salvage pathway;; 4-toluenesulfonate degradation I;; enterobacterial common antigen biosynthesis;; rosmarinic acid biosynthesis I;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; ethylbenzene degradation (anaerobic);; L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of L-lysine degradation;; shikimate degradation II;; sucrose degradation VII (sucrose 3-dehydrogenase);; L-homomethionine biosynthesis;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; actinorhodin biosynthesis;; cutin biosynthesis;; 4-toluenecarboxylate degradation;; benzoyl-CoA degradation II (anaerobic);; L-lysine degradation III;; juvenile hormone III biosynthesis I;; D-glucuronate degradation II;; lactate biosynthesis (archaea);; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; L-sorbose degradation;; reductive TCA cycle II;; D-xylose degradation II;; artemisinin and arteannuin B biosynthesis;; matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);;
metacyc_pathway_type All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; 4-Toluenesulfonate-Degradation;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Rosmarinate-Biosynthesis;; Autotrophic-CO2-Fixation;; AROMATIC-COMPOUNDS-DEGRADATION;; Ascorbate-Biosynthesis;; LYSINE-DEG; Super-Pathways;; Shikimate-Degradation;; SUCROSE-DEG;; Other-Amino-Acid-Biosynthesis;; Sugar-Derivatives; Super-Pathways;; Antibiotic-Biosynthesis;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Benzoyl-CoA-Degradation;; LYSINE-DEG;; HORMONE-SYN; JH-III-Biosynthesis;; D-Glucuronate-Degradation;; Energy-Metabolism;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Sugars-And-Polysaccharides-Degradation;; Reductive-TCA-Cycles;; Xylose-Degradation;; SESQUITERPENE-LACTONE;; LIGNAN-SYN;; Stearate-Biosynthesis;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:1.9e-46 score:157.2 best_domain_score:157.0 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:3e-59 score:199.7 best_domain_score:199.4 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:8.3e-12 score:44.6 best_domain_score:44.2 name:KR;
sprot_desc Tropinone reductase homolog At5g06060;
sprot_id sp|Q9LHT0|TRNHF_ARATH;
sprot_target db:uniprot_sprot|sp|Q9LHT0|TRNHF_ARATH 8 250 evalue:9.5e-37 qcov:96.40 identity:36.20;
67575 66862 CDS
ID metaerg.pl|06334
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726073.1 9 237 evalue:5.5e-72 qcov:96.60 identity:61.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00300;
pfam_desc Histidine phosphatase superfamily (branch 1);
pfam_id His_Phos_1;
pfam_target db:Pfam-A.hmm|PF00300.22 evalue:5.1e-14 score:51.6 best_domain_score:27.8 name:His_Phos_1;
68116 67637 CDS
ID metaerg.pl|06335
allec_ids 1.8.4.11;
allgo_ids GO:0008113; GO:0055114; GO:0006464;
allko_ids K07305; K12267; K07304;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Palsa-288;s__Palsa-288 sp003133205;
genomedb_acc GCA_003133205.1;
genomedb_target db:genomedb|GCA_003133205.1|PKWK01000115.1_3 3 151 evalue:2.7e-54 qcov:93.70 identity:67.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF01625;
pfam_desc Peptide methionine sulfoxide reductase;
pfam_id PMSR;
pfam_target db:Pfam-A.hmm|PF01625.21 evalue:1.7e-62 score:209.4 best_domain_score:209.2 name:PMSR;
sprot_desc Peptide methionine sulfoxide reductase MsrA;
sprot_id sp|A3CUG3|MSRA_METMJ;
sprot_target db:uniprot_sprot|sp|A3CUG3|MSRA_METMJ 3 152 evalue:4.6e-53 qcov:94.30 identity:62.70;
tigrfam_acc TIGR00401;
tigrfam_desc peptide-methionine (S)-S-oxide reductase;
tigrfam_mainrole Cellular processes;
tigrfam_name msrA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00401 evalue:9.4e-61 score:203.8 best_domain_score:203.6 name:TIGR00401;
68196 69698 CDS
ID metaerg.pl|06336
allec_ids 3.1.11.1;
allgo_ids GO:0006281; GO:0008852; GO:0051575; GO:0000287; GO:0008310; GO:0003697; GO:0006308; GO:0000738;
allko_ids K01141;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:1.3e-14 score:53.9 best_domain_score:52.8 name:DEDDh;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726074.1 17 491 evalue:1.6e-182 qcov:95.00 identity:65.10;
kegg_pathway_id 03430;
kegg_pathway_name Mismatch repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF08411; PF00929;
pfam_desc Exonuclease C-terminal; Exonuclease;
pfam_id Exonuc_X-T_C; RNase_T;
pfam_target db:Pfam-A.hmm|PF08411.10 evalue:1.6e-68 score:230.0 best_domain_score:229.4 name:Exonuc_X-T_C; db:Pfam-A.hmm|PF00929.24 evalue:1.2e-23 score:83.7 best_domain_score:83.2 name:RNase_T;
sprot_desc Exodeoxyribonuclease I;
sprot_id sp|P04995|EX1_ECOLI;
sprot_target db:uniprot_sprot|sp|P04995|EX1_ECOLI 20 446 evalue:1.7e-93 qcov:85.40 identity:42.40;
70275 69988 CDS
ID metaerg.pl|06337
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726075.1 1 86 evalue:4.5e-17 qcov:90.50 identity:64.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
70504 70788 CDS
ID metaerg.pl|06338
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726076.1 1 94 evalue:1.3e-19 qcov:100.00 identity:61.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00633; PF12836; PF03934;
pfam_desc Helix-hairpin-helix motif; Helix-hairpin-helix motif; Type II secretion system (T2SS), protein K;
pfam_id HHH; HHH_3; T2SSK;
pfam_target db:Pfam-A.hmm|PF00633.23 evalue:1.7e-07 score:30.0 best_domain_score:23.0 name:HHH; db:Pfam-A.hmm|PF12836.7 evalue:9.4e-21 score:73.1 best_domain_score:72.7 name:HHH_3; db:Pfam-A.hmm|PF03934.13 evalue:1.5e-06 score:27.0 best_domain_score:27.0 name:T2SSK;
sp YES;
tigrfam_acc TIGR00426;
tigrfam_desc competence protein ComEA helix-hairpin-helix repeat region;
tigrfam_mainrole Cellular processes;
tigrfam_name TIGR00426;
tigrfam_sub1role DNA transformation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00426 evalue:3.2e-23 score:80.7 best_domain_score:80.4 name:TIGR00426;
tm_num 1;
70504 70572 signal_peptide
ID metaerg.pl|06339
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
70504 70788 transmembrane_helix
ID metaerg.pl|06340
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i70522-70581o;
71489 70890 CDS
ID metaerg.pl|06341
allgo_ids GO:0003677; GO:0046872; GO:0006310; GO:0006281;
allko_ids K06187;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726077.1 2 196 evalue:1.6e-88 qcov:98.00 identity:85.60;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF02132; PF01751; PF13662;
pfam_desc RecR protein; Toprim domain; Toprim domain;
pfam_id RecR; Toprim; Toprim_4;
pfam_target db:Pfam-A.hmm|PF02132.15 evalue:7.1e-13 score:47.1 best_domain_score:46.2 name:RecR; db:Pfam-A.hmm|PF01751.22 evalue:9.3e-12 score:44.3 best_domain_score:43.7 name:Toprim; db:Pfam-A.hmm|PF13662.6 evalue:6.4e-23 score:80.3 best_domain_score:79.5 name:Toprim_4;
sprot_desc Recombination protein RecR;
sprot_id sp|A8H2R3|RECR_SHEPA;
sprot_target db:uniprot_sprot|sp|A8H2R3|RECR_SHEPA 6 196 evalue:1.6e-63 qcov:96.00 identity:63.50;
tigrfam_acc TIGR00615;
tigrfam_desc recombination protein RecR;
tigrfam_mainrole DNA metabolism;
tigrfam_name recR;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00615 evalue:1.4e-71 score:239.2 best_domain_score:239.0 name:TIGR00615;
71816 71499 CDS
ID metaerg.pl|06342
allgo_ids GO:0043590; GO:0005737; GO:0003677;
allko_ids K09747;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726078.1 1 105 evalue:8.5e-41 qcov:100.00 identity:82.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF02575;
pfam_desc YbaB/EbfC DNA-binding family;
pfam_id YbaB_DNA_bd;
pfam_target db:Pfam-A.hmm|PF02575.16 evalue:8.2e-34 score:115.0 best_domain_score:114.8 name:YbaB_DNA_bd;
sprot_desc Nucleoid-associated protein BamMC406_1737;
sprot_id sp|B1YRE8|Y1737_BURA4;
sprot_target db:uniprot_sprot|sp|B1YRE8|Y1737_BURA4 1 105 evalue:4.7e-30 qcov:100.00 identity:63.20;
tigrfam_acc TIGR00103;
tigrfam_desc DNA-binding protein, YbaB/EbfC family;
tigrfam_mainrole Unknown function;
tigrfam_name DNA_YbaB_EbfC;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00103 evalue:4.6e-31 score:106.2 best_domain_score:106.0 name:TIGR00103;
73552 71822 CDS
ID metaerg.pl|06343
allec_ids 2.7.7.7;
allgo_ids GO:0005524;
allko_ids K02341; K02340; K02343;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726079.1 1 576 evalue:4.9e-215 qcov:100.00 identity:70.10;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00004; PF13177; PF12169; PF12170; PF05496;
pfam_desc ATPase family associated with various cellular activities (AAA); DNA polymerase III, delta subunit; DNA polymerase III subunits gamma and tau domain III; DNA polymerase III tau subunit V interacting with alpha; Holliday junction DNA helicase RuvB P-loop domain;
pfam_id AAA; DNA_pol3_delta2; DNA_pol3_gamma3; DNA_pol3_tau_5; RuvB_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:9.3e-13 score:48.0 best_domain_score:45.2 name:AAA; db:Pfam-A.hmm|PF13177.6 evalue:7.2e-44 score:148.7 best_domain_score:148.2 name:DNA_pol3_delta2; db:Pfam-A.hmm|PF12169.8 evalue:7.7e-30 score:102.9 best_domain_score:101.8 name:DNA_pol3_gamma3; db:Pfam-A.hmm|PF12170.8 evalue:8.6e-15 score:54.3 best_domain_score:53.4 name:DNA_pol3_tau_5; db:Pfam-A.hmm|PF05496.12 evalue:7.7e-07 score:28.2 best_domain_score:23.6 name:RuvB_N;
tigrfam_acc TIGR02397;
tigrfam_desc DNA polymerase III, subunit gamma and tau;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnaX_nterm;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02397 evalue:2.7e-133 score:443.8 best_domain_score:443.5 name:TIGR02397;
74263 76491 CDS
ID metaerg.pl|06344
allec_ids 3.4.21.-;
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169909.1 45 742 evalue:7.9e-234 qcov:94.10 identity:61.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF05922; PF00082; PF04151;
pfam_desc Peptidase inhibitor I9; Subtilase family; Bacterial pre-peptidase C-terminal domain;
pfam_id Inhibitor_I9; Peptidase_S8; PPC;
pfam_target db:Pfam-A.hmm|PF05922.16 evalue:1.7e-07 score:31.0 best_domain_score:30.2 name:Inhibitor_I9; db:Pfam-A.hmm|PF00082.22 evalue:4.8e-38 score:130.3 best_domain_score:130.3 name:Peptidase_S8; db:Pfam-A.hmm|PF04151.15 evalue:9.9e-34 score:115.5 best_domain_score:54.3 name:PPC;
sp YES;
sprot_desc Alkaline serine exoprotease A;
sprot_id sp|P16588|PROA_VIBAL;
sprot_target db:uniprot_sprot|sp|P16588|PROA_VIBAL 1 528 evalue:4.2e-117 qcov:71.20 identity:46.40;
74263 74334 signal_peptide
ID metaerg.pl|06345
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
78194 76623 CDS
ID metaerg.pl|06346
allgo_ids GO:0016020; GO:0022857; GO:0071705; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Paenibacillales;f__Paenibacillaceae;g__Paenibacillus_C;s__Paenibacillus_C harenae;
genomedb_acc GCF_000422465.1;
genomedb_target db:genomedb|GCF_000422465.1|WP_028608536.1 6 517 evalue:3.9e-187 qcov:97.90 identity:64.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF02028;
pfam_desc BCCT, betaine/carnitine/choline family transporter;
pfam_id BCCT;
pfam_target db:Pfam-A.hmm|PF02028.17 evalue:1.3e-182 score:606.8 best_domain_score:606.6 name:BCCT;
sprot_desc Ectoine/hydroxyectoine transporter;
sprot_id sp|Q93AK1|ECTT_VIRPA;
sprot_target db:uniprot_sprot|sp|Q93AK1|ECTT_VIRPA 9 490 evalue:1.5e-156 qcov:92.20 identity:58.10;
tigrfam_acc TIGR00842;
tigrfam_desc transporter, betaine/carnitine/choline transporter (BCCT) family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name bcct;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00842 evalue:9.7e-149 score:495.1 best_domain_score:494.9 name:TIGR00842;
tm_num 12;
78194 76623 transmembrane_helix
ID metaerg.pl|06347
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i76653-76721o76764-76823i76881-76949o77034-77102i77190-77249o77277-77345i77406-77474o77556-77615i77649-77717o77832-77900i77946-78014o78024-78092i;
78415 79290 CDS
ID metaerg.pl|06348
allec_ids 3.1.2.-;
allgo_ids GO:0047617; GO:0006637;
allko_ids K10805;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725865.1 1 288 evalue:7.6e-124 qcov:99.00 identity:73.30;
kegg_pathway_id 01040;
kegg_pathway_name Biosynthesis of unsaturated fatty acids;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
metacyc_pathway_id PWY-5897; ALL-CHORISMATE-PWY; PWY-5996; PWY0-1337; PWY-5838; PWY-5861; PWY-5850; PWY-5899; PWY-981; PWY-6453; PWY-5791; PWY-5837; PWY-6320; PWY-5840; PWY-5898; PWY-5863; PWY-5862; PWY-5845; PWY-5896; PWY-5860;
metacyc_pathway_name superpathway of menaquinol-11 biosynthesis;; superpathway of chorismate metabolism;; oleate biosynthesis II (animals and fungi);; oleate β-oxidation;; superpathway of menaquinol-8 biosynthesis I;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; salicylate biosynthesis II;; stigma estolide biosynthesis;; ; 2-carboxy-1,4-naphthoquinol biosynthesis;; phaselate biosynthesis;; superpathway of menaquinol-7 biosynthesis;; superpathway of menaquinol-12 biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-6 biosynthesis I;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; Super-Pathways;; Oleate-Biosynthesis;; Fatty-Acid-Degradation;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Salicylate-Biosynthesis;; Lipid-Biosynthesis;; ; DHNA-Biosynthesis;; AROMATIC-COMPOUNDS-BIOSYN;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;;
pfam_acc PF13622; PF02551;
pfam_desc Thioesterase-like superfamily; Acyl-CoA thioesterase;
pfam_id 4HBT_3; Acyl_CoA_thio;
pfam_target db:Pfam-A.hmm|PF13622.6 evalue:3.9e-58 score:196.9 best_domain_score:196.6 name:4HBT_3; db:Pfam-A.hmm|PF02551.15 evalue:1.9e-44 score:149.9 best_domain_score:118.3 name:Acyl_CoA_thio;
sprot_desc Acyl-CoA thioesterase 2;
sprot_id sp|P0AGG3|TESB_ECO57;
sprot_target db:uniprot_sprot|sp|P0AGG3|TESB_ECO57 1 282 evalue:2.9e-77 qcov:96.90 identity:50.20;
tigrfam_acc TIGR00189;
tigrfam_desc acyl-CoA thioesterase II;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name tesB;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00189 evalue:2e-90 score:302.2 best_domain_score:302.0 name:TIGR00189;
82184 79326 CDS
ID metaerg.pl|06349
allgo_ids GO:0006508; GO:0008236;
allko_ids K01730; K01303;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Tc-Br11-B2g6-7;s__Tc-Br11-B2g6-7 sp001564055;
genomedb_acc GCA_001564055.1;
genomedb_target db:genomedb|GCA_001564055.1|LKNB01000085.1_8 202 950 evalue:1.6e-263 qcov:78.70 identity:56.80;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF07676; PF00326;
pfam_desc WD40-like Beta Propeller Repeat; Prolyl oligopeptidase family;
pfam_id PD40; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF07676.12 evalue:1.4e-06 score:27.3 best_domain_score:13.2 name:PD40; db:Pfam-A.hmm|PF00326.21 evalue:9e-23 score:80.1 best_domain_score:79.3 name:Peptidase_S9;
sp YES;
tm_num 1;
79326 79406 signal_peptide
ID metaerg.pl|06350
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
82184 79326 transmembrane_helix
ID metaerg.pl|06351
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i79344-79403o;
84418 82616 CDS
ID metaerg.pl|06352
allgo_ids GO:0005515;
allko_ids K01485;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__UBA2363;g__UBA2363;s__UBA2363 sp002344355;
genomedb_acc GCA_002344355.1;
genomedb_target db:genomedb|GCA_002344355.1|DDTN01000019.1_35 10 596 evalue:7.1e-92 qcov:97.80 identity:39.80;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00990; PF17853; PF00515; PF13424;
pfam_desc Diguanylate cyclase, GGDEF domain; GGDEF-like domain; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id GGDEF; GGDEF_2; TPR_1; TPR_12;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:6.2e-42 score:142.3 best_domain_score:141.0 name:GGDEF; db:Pfam-A.hmm|PF17853.1 evalue:4.6e-07 score:29.3 best_domain_score:21.9 name:GGDEF_2; db:Pfam-A.hmm|PF00515.28 evalue:1.4e-07 score:30.2 best_domain_score:11.3 name:TPR_1; db:Pfam-A.hmm|PF13424.6 evalue:1.4e-26 score:91.9 best_domain_score:38.3 name:TPR_12;
sp YES;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:9.2e-40 score:135.2 best_domain_score:134.8 name:TIGR00254;
tm_num 1;
82616 82681 signal_peptide
ID metaerg.pl|06353
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
84418 82616 transmembrane_helix
ID metaerg.pl|06354
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology o83825-83884i;
86217 84598 CDS
ID metaerg.pl|06355
allgo_ids GO:0005507; GO:0009055;
allko_ids K00406; K00368;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__UBA2664;s__UBA2664 sp002359315;
genomedb_acc GCA_002359315.1;
genomedb_target db:genomedb|GCA_002359315.1|DEMS01000015.1_57 25 539 evalue:2.9e-185 qcov:95.50 identity:60.50;
kegg_pathway_id 00190; 00910;
kegg_pathway_name Oxidative phosphorylation; Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00127; PF07731; PF07732; PF13473;
pfam_desc Copper binding proteins, plastocyanin/azurin family; Multicopper oxidase; Multicopper oxidase; Cupredoxin-like domain;
pfam_id Copper-bind; Cu-oxidase_2; Cu-oxidase_3; Cupredoxin_1;
pfam_target db:Pfam-A.hmm|PF00127.20 evalue:2.9e-16 score:59.0 best_domain_score:40.2 name:Copper-bind; db:Pfam-A.hmm|PF07731.14 evalue:6.4e-09 score:34.9 best_domain_score:15.5 name:Cu-oxidase_2; db:Pfam-A.hmm|PF07732.15 evalue:3.6e-15 score:55.3 best_domain_score:37.2 name:Cu-oxidase_3; db:Pfam-A.hmm|PF13473.6 evalue:1.3e-10 score:40.6 best_domain_score:19.1 name:Cupredoxin_1;
sp YES;
tm_num 1;
84598 84690 signal_peptide
ID metaerg.pl|06356
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
86217 84598 transmembrane_helix
ID metaerg.pl|06357
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i84631-84690o;
86637 86266 CDS
ID metaerg.pl|06358
allgo_ids GO:0009055; GO:0020037;
allko_ids K05301; K00368; K00428; K00405; K05601;
genomedb_OC d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__2-02-FULL-66-22;g__2-02-FULL-66-22;s__2-02-FULL-66-22 sp001771285;
genomedb_acc GCA_001771285.1;
genomedb_target db:genomedb|GCA_001771285.1|OGC01372.1 16 120 evalue:1.4e-10 qcov:85.40 identity:40.40;
kegg_pathway_id 00910; 00920; 00190;
kegg_pathway_name Nitrogen metabolism; Sulfur metabolism; Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF13442; PF00034;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c;
pfam_id Cytochrome_CBB3; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:7e-13 score:47.9 best_domain_score:47.5 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:7.3e-09 score:35.9 best_domain_score:35.1 name:Cytochrom_C;
sp YES;
tm_num 1;
86266 86343 signal_peptide
ID metaerg.pl|06359
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
86637 86266 transmembrane_helix
ID metaerg.pl|06360
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i86284-86343o;
87321 86821 CDS
ID metaerg.pl|06361
allgo_ids GO:0016209; GO:0016491; GO:0055114;
allko_ids K11065;
genomedb_OC d__Bacteria;p__Elusimicrobiota;c__UBA8919;o__UBA8919;f__UBA8919;g__UBA9627;s__UBA9627 sp001800605;
genomedb_acc GCA_001800605.1;
genomedb_target db:genomedb|GCA_001800605.1|OGS46814.1 39 162 evalue:5.0e-19 qcov:74.70 identity:37.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:8.6e-16 score:57.2 best_domain_score:56.9 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:6.4e-14 score:51.1 best_domain_score:50.9 name:Redoxin;
sp YES;
86821 86895 signal_peptide
ID metaerg.pl|06362
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
88705 87497 CDS
ID metaerg.pl|06363
allec_ids 6.3.4.21;
allgo_ids GO:0004516; GO:0004514; GO:0009435; GO:0019357;
allko_ids K00763;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38324.1 12 397 evalue:1.9e-181 qcov:96.00 identity:80.10;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF04095; PF17767;
pfam_desc Nicotinate phosphoribosyltransferase (NAPRTase) family; Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain;
pfam_id NAPRTase; NAPRTase_N;
pfam_target db:Pfam-A.hmm|PF04095.16 evalue:9.5e-66 score:221.1 best_domain_score:220.8 name:NAPRTase; db:Pfam-A.hmm|PF17767.1 evalue:3.3e-35 score:120.4 best_domain_score:119.5 name:NAPRTase_N;
sprot_desc Nicotinate phosphoribosyltransferase;
sprot_id sp|B9MHC7|PNCB_ACIET;
sprot_target db:uniprot_sprot|sp|B9MHC7|PNCB_ACIET 12 397 evalue:3.3e-140 qcov:96.00 identity:59.20;
tigrfam_acc TIGR01514;
tigrfam_desc nicotinate phosphoribosyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name NAPRTase;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01514 evalue:7.4e-139 score:462.4 best_domain_score:462.2 name:TIGR01514;
88826 89095 CDS
ID metaerg.pl|06364
allgo_ids GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726703.1 1 89 evalue:2.8e-21 qcov:100.00 identity:64.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF01402;
pfam_desc Ribbon-helix-helix protein, copG family;
pfam_id RHH_1;
pfam_target db:Pfam-A.hmm|PF01402.21 evalue:0.00012 score:21.1 best_domain_score:21.1 name:RHH_1;
sprot_desc Putative antitoxin VapB37;
sprot_id sp|P9WJ26|VPB37_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WJ26|VPB37_MYCTO 1 84 evalue:3.9e-09 qcov:94.40 identity:44.00;
89428 89162 CDS
ID metaerg.pl|06365
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
92818 89603 CDS
ID metaerg.pl|06366
allgo_ids GO:0003677; GO:0005524; GO:0016787;
allko_ids K01509; K14439; K08282; K14440;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalomonadales;f__Thiohalomonadaceae;g__UBA3588;s__UBA3588 sp002840095;
genomedb_acc GCA_002840095.1;
genomedb_target db:genomedb|GCA_002840095.1|PKM44943.1 54 1070 evalue:4.0e-303 qcov:95.00 identity:54.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00271; PF04851; PF00176;
pfam_desc Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; SNF2 family N-terminal domain;
pfam_id Helicase_C; ResIII; SNF2_N;
pfam_target db:Pfam-A.hmm|PF00271.31 evalue:9.1e-19 score:67.1 best_domain_score:66.0 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:1.8e-09 score:37.0 best_domain_score:36.4 name:ResIII; db:Pfam-A.hmm|PF00176.23 evalue:3.8e-64 score:215.9 best_domain_score:214.9 name:SNF2_N;
93530 93054 CDS
ID metaerg.pl|06367
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA8438;g__UBA8438;s__UBA8438 sp002726085;
genomedb_acc GCA_002726085.1;
genomedb_target db:genomedb|GCA_002726085.1|MBQ02633.1 4 157 evalue:4.7e-51 qcov:97.50 identity:65.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF01850;
pfam_desc PIN domain;
pfam_id PIN;
pfam_target db:Pfam-A.hmm|PF01850.21 evalue:2.6e-10 score:40.1 best_domain_score:39.8 name:PIN;
93807 93514 CDS
ID metaerg.pl|06368
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__UBA7540;f__UBA7540;g__UBA7540;s__UBA7540 sp002478145;
genomedb_acc GCA_002478145.1;
genomedb_target db:genomedb|GCA_002478145.1|DLMI01000074.1_10 1 96 evalue:9.6e-15 qcov:99.00 identity:48.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF04014;
pfam_desc Antidote-toxin recognition MazE, bacterial antitoxin;
pfam_id MazE_antitoxin;
pfam_target db:Pfam-A.hmm|PF04014.18 evalue:1.5e-09 score:36.8 best_domain_score:36.1 name:MazE_antitoxin;
tigrfam_acc TIGR01439;
tigrfam_desc transcriptional regulator, AbrB family;
tigrfam_mainrole Regulatory functions;
tigrfam_name lp_hng_hel_AbrB;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01439 evalue:5.9e-08 score:31.5 best_domain_score:31.0 name:TIGR01439;
94333 93980 CDS
ID metaerg.pl|06369
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
sp YES;
tm_num 1;
93980 94051 signal_peptide
ID metaerg.pl|06370
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
94333 93980 transmembrane_helix
ID metaerg.pl|06371
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology i93992-94060o;
94922 94335 CDS
ID metaerg.pl|06372
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax sp002337465;
genomedb_acc GCA_002337465.1;
genomedb_target db:genomedb|GCA_002337465.1|DDGB01000019.1_282 9 193 evalue:1.6e-21 qcov:94.90 identity:33.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF02630;
pfam_desc SCO1/SenC;
pfam_id SCO1-SenC;
pfam_target db:Pfam-A.hmm|PF02630.14 evalue:1.1e-29 score:102.3 best_domain_score:102.1 name:SCO1-SenC;
sp YES;
94335 94391 lipoprotein_signal_peptide
ID metaerg.pl|06373
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
95673 94948 CDS
ID metaerg.pl|06374
allgo_ids GO:0016021; GO:0005886; GO:0071111; GO:0052621; GO:0071732;
allko_ids K21023;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Nitrococcaceae;g__E85;s__E85 sp003149435;
genomedb_acc GCF_003149435.1;
genomedb_target db:genomedb|GCF_003149435.1|WP_109676992.1 1 228 evalue:4.0e-54 qcov:94.60 identity:51.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF03707;
pfam_desc Bacterial signalling protein N terminal repeat;
pfam_id MHYT;
pfam_target db:Pfam-A.hmm|PF03707.16 evalue:2.4e-44 score:148.5 best_domain_score:58.5 name:MHYT;
sprot_desc Uncharacterized signaling protein PA1727;
sprot_id sp|Q9I310|Y1727_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I310|Y1727_PSEAE 5 192 evalue:5.9e-20 qcov:78.00 identity:34.00;
tm_num 7;
95673 94948 transmembrane_helix
ID metaerg.pl|06375
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
topology o94975-95034i95071-95139o95182-95250i95269-95328o95371-95439i95458-95526o95584-95652i;
96492 95875 CDS
ID metaerg.pl|06376
allec_ids 2.7.7.7;
allgo_ids GO:0003677; GO:0003887; GO:0006260;
allko_ids K02337; K02342; K03763;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:2.8e-41 score:140.5 best_domain_score:140.2 name:DEDDh;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38518.1 4 201 evalue:9.3e-84 qcov:96.60 identity:77.30;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
pfam_acc PF00929;
pfam_desc Exonuclease;
pfam_id RNase_T;
pfam_target db:Pfam-A.hmm|PF00929.24 evalue:5.6e-26 score:91.3 best_domain_score:91.0 name:RNase_T;
sprot_desc DNA polymerase III subunit epsilon-like protein;
sprot_id sp|O68045|DPO3E_RHOCB;
sprot_target db:uniprot_sprot|sp|O68045|DPO3E_RHOCB 3 164 evalue:1.8e-17 qcov:79.00 identity:38.00;
98513 96705 CDS
ID metaerg.pl|06377
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Gloeomargaritales;f__Gloeomargaritaceae;g__Gloeomargarita;s__Gloeomargarita lithophora;
genomedb_acc GCF_001870225.1;
genomedb_target db:genomedb|GCF_001870225.1|WP_071453378.1 9 588 evalue:1.6e-46 qcov:96.30 identity:32.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.142003; 61.6491; 0.0435119; 0.00483917; 61.4588;
>Feature NODE_40_length_97460_cov_91.5115
3 317 CDS
ID metaerg.pl|06378
allec_ids 1.1.1.86;
allgo_ids GO:0004455; GO:0009082; GO:0055114; GO:0000287; GO:0050661; GO:0009097; GO:0009099;
allko_ids K00053;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sagittula;s__Sagittula sp002814095;
genomedb_acc GCF_002814095.1;
genomedb_target db:genomedb|GCF_002814095.1|WP_100927119.1 1 104 evalue:1.8e-51 qcov:100.00 identity:98.10;
kegg_pathway_id 00770; 00290;
kegg_pathway_name Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id THREOCAT-PWY; PWY-3001; VALSYN-PWY; PWY-5101; ILEUSYN-PWY; PWY-5104; BRANCHED-CHAIN-AA-SYN-PWY; PWY-5103;
metacyc_pathway_name superpathway of L-threonine metabolism;; superpathway of L-isoleucine biosynthesis I;; L-valine biosynthesis;; L-isoleucine biosynthesis II;; L-isoleucine biosynthesis I (from threonine);; L-isoleucine biosynthesis IV;; superpathway of branched chain amino acid biosynthesis;; L-isoleucine biosynthesis III;;
metacyc_pathway_type Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN; Super-Pathways;; VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;;
pfam_acc PF01450;
pfam_desc Acetohydroxy acid isomeroreductase, catalytic domain;
pfam_id IlvC;
pfam_target db:Pfam-A.hmm|PF01450.19 evalue:2.1e-31 score:108.4 best_domain_score:108.2 name:IlvC;
sprot_desc Ketol-acid reductoisomerase (NADP(+));
sprot_id sp|A3PH14|ILVC_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PH14|ILVC_RHOS1 1 104 evalue:1.4e-50 qcov:100.00 identity:93.30;
605 396 CDS
ID metaerg.pl|06379
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_A;s__Rhodobacter_A azotoformans;
genomedb_acc GCF_003050905.1;
genomedb_target db:genomedb|GCF_003050905.1|WP_011907705.1 1 55 evalue:7.1e-12 qcov:79.70 identity:74.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
sp YES;
tm_num 1;
396 494 signal_peptide
ID metaerg.pl|06380
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
605 396 transmembrane_helix
ID metaerg.pl|06381
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology o408-467i;
1320 715 CDS
ID metaerg.pl|06382
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798636.1 1 201 evalue:2.9e-90 qcov:100.00 identity:78.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF06938;
pfam_desc Protein of unknown function (DUF1285);
pfam_id DUF1285;
pfam_target db:Pfam-A.hmm|PF06938.11 evalue:2.5e-59 score:198.7 best_domain_score:198.5 name:DUF1285;
1400 2407 CDS
ID metaerg.pl|06383
allgo_ids GO:0005524; GO:0016887;
allko_ids K03924;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470498.1 1 335 evalue:9.6e-163 qcov:100.00 identity:88.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF07726; PF07728; PF17863;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); AAA lid domain;
pfam_id AAA_3; AAA_5; AAA_lid_2;
pfam_target db:Pfam-A.hmm|PF07726.11 evalue:3.2e-57 score:191.2 best_domain_score:190.7 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:2.5e-11 score:43.0 best_domain_score:42.1 name:AAA_5; db:Pfam-A.hmm|PF17863.1 evalue:1.3e-10 score:40.2 best_domain_score:39.0 name:AAA_lid_2;
sprot_desc hypothetical protein;
sprot_id sp|P94474|YEAC_BACSU;
sprot_target db:uniprot_sprot|sp|P94474|YEAC_BACSU 12 324 evalue:1.4e-48 qcov:93.40 identity:38.90;
2404 3282 CDS
ID metaerg.pl|06384
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480336.1 1 292 evalue:1.6e-129 qcov:100.00 identity:80.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF01882;
pfam_desc Protein of unknown function DUF58;
pfam_id DUF58;
pfam_target db:Pfam-A.hmm|PF01882.18 evalue:7.3e-10 score:38.2 best_domain_score:38.2 name:DUF58;
3282 6038 CDS
ID metaerg.pl|06385
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798632.1 1 918 evalue:0.0e+00 qcov:100.00 identity:83.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF07584; PF13709;
pfam_desc Aerotolerance regulator N-terminal; Domain of unknown function (DUF4159);
pfam_id BatA; DUF4159;
pfam_target db:Pfam-A.hmm|PF07584.11 evalue:4.1e-13 score:48.7 best_domain_score:48.7 name:BatA; db:Pfam-A.hmm|PF13709.6 evalue:6.6e-56 score:188.2 best_domain_score:187.4 name:DUF4159;
tigrfam_acc TIGR02226;
tigrfam_desc N-terminal double-transmembrane domain;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name two_anch;
tigrfam_sub1role Domain;
tigrfam_target db:TIGRFAMs.hmm|TIGR02226 evalue:1.7e-14 score:53.0 best_domain_score:53.0 name:TIGR02226;
tm_num 4;
3282 6038 transmembrane_helix
ID metaerg.pl|06386
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology o3297-3365i3462-3530o5130-5198i5217-5276o;
6035 8104 CDS
ID metaerg.pl|06387
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798629.1 1 689 evalue:0.0e+00 qcov:100.00 identity:81.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
tm_num 2;
6035 8104 transmembrane_helix
ID metaerg.pl|06388
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i6068-6136o8021-8089i;
8472 8185 CDS
ID metaerg.pl|06389
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798713.1 1 91 evalue:2.7e-22 qcov:95.80 identity:60.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
tm_num 3;
8472 8185 transmembrane_helix
ID metaerg.pl|06390
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology o8197-8265i8284-8352o8380-8448i;
9884 8472 CDS
ID metaerg.pl|06391
allec_ids 6.3.2.8;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0008763; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01928; K01924; K01929; K01925; K02558;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798711.1 1 470 evalue:1.8e-255 qcov:100.00 identity:93.40;
kegg_pathway_id 00550; 00300; 00471;
kegg_pathway_name Peptidoglycan biosynthesis; Lysine biosynthesis; D-Glutamine and D-glutamate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY-6387; PWY-6385; PWY-5265; PWY-6386; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6470;
metacyc_pathway_name UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01225; PF02875; PF08245;
pfam_desc Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase; Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF01225.25 evalue:4e-29 score:100.0 best_domain_score:98.6 name:Mur_ligase; db:Pfam-A.hmm|PF02875.21 evalue:6.4e-19 score:67.2 best_domain_score:63.9 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:1.8e-28 score:99.1 best_domain_score:98.6 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramate--L-alanine ligase;
sprot_id sp|A1BAL4|MURC_PARDP;
sprot_target db:uniprot_sprot|sp|A1BAL4|MURC_PARDP 1 470 evalue:2.1e-218 qcov:100.00 identity:79.70;
tigrfam_acc TIGR01082;
tigrfam_desc UDP-N-acetylmuramate--L-alanine ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murC;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01082 evalue:2e-153 score:510.8 best_domain_score:510.6 name:TIGR01082;
tm_num 1;
9884 8472 transmembrane_helix
ID metaerg.pl|06392
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i8508-8576o;
10988 9897 CDS
ID metaerg.pl|06393
allec_ids 2.4.1.227;
allgo_ids GO:0005975; GO:0016758; GO:0030259; GO:0005886; GO:0051991; GO:0050511; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K02563;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798708.1 1 360 evalue:1.4e-164 qcov:99.20 identity:83.90;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6470; PWY-6385; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF03033; PF04101;
pfam_desc Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain;
pfam_id Glyco_transf_28; Glyco_tran_28_C;
pfam_target db:Pfam-A.hmm|PF03033.20 evalue:1e-29 score:102.6 best_domain_score:101.9 name:Glyco_transf_28; db:Pfam-A.hmm|PF04101.16 evalue:1.6e-32 score:112.0 best_domain_score:111.6 name:Glyco_tran_28_C;
sp YES;
sprot_desc UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;
sprot_id sp|Q3J4M2|MURG_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J4M2|MURG_RHOS4 5 360 evalue:2.6e-128 qcov:98.10 identity:66.00;
9897 9971 signal_peptide
ID metaerg.pl|06394
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
12170 11001 CDS
ID metaerg.pl|06395
allec_ids 2.4.1.129;
allgo_ids GO:0016021; GO:0051301; GO:0005886; GO:0008955; GO:0007049; GO:0071555; GO:0009252; GO:0008360;
allko_ids K03588;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798706.1 1 387 evalue:2.3e-192 qcov:99.50 identity:88.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6470; PWY-6385; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01098;
pfam_desc Cell cycle protein;
pfam_id FTSW_RODA_SPOVE;
pfam_target db:Pfam-A.hmm|PF01098.19 evalue:1.1e-75 score:254.1 best_domain_score:253.9 name:FTSW_RODA_SPOVE;
sprot_desc Probable peptidoglycan glycosyltransferase FtsW;
sprot_id sp|B8H092|FTSW_CAUVN;
sprot_target db:uniprot_sprot|sp|B8H092|FTSW_CAUVN 11 380 evalue:1.9e-68 qcov:95.10 identity:39.10;
tm_num 8;
12170 11001 transmembrane_helix
ID metaerg.pl|06396
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i11088-11156o11184-11252i11271-11339o11487-11555i11574-11642o11820-11888i11946-12014o12042-12110i;
12981 12316 CDS
ID metaerg.pl|06397
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470734.1 1 220 evalue:1.4e-72 qcov:99.50 identity:62.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:2.6e-05 score:24.1 best_domain_score:23.8 name:Metallophos;
tigrfam_acc TIGR04123;
tigrfam_desc metallophosphoesterase, DNA ligase-associated;
tigrfam_name P_estr_lig_assc;
tigrfam_target db:TIGRFAMs.hmm|TIGR04123 evalue:1.2e-49 score:167.7 best_domain_score:167.5 name:TIGR04123;
15410 12987 CDS
ID metaerg.pl|06398
allec_ids 3.6.4.-;
allgo_ids GO:0003676; GO:0005524; GO:0004386;
allko_ids K05591; K03725; K03724;
casgene_acc cd09639_cas3_CAS-I;
casgene_name cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:4.3e-13 score:48.3 best_domain_score:43.2 name:cas3;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481158.1 9 802 evalue:0.0e+00 qcov:98.40 identity:84.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00270; PF08494; PF00271;
pfam_desc DEAD/DEAH box helicase; DEAD/H associated; Helicase conserved C-terminal domain;
pfam_id DEAD; DEAD_assoc; Helicase_C;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:3.9e-22 score:78.1 best_domain_score:77.3 name:DEAD; db:Pfam-A.hmm|PF08494.11 evalue:4.5e-38 score:130.2 best_domain_score:129.0 name:DEAD_assoc; db:Pfam-A.hmm|PF00271.31 evalue:2.6e-14 score:52.7 best_domain_score:51.7 name:Helicase_C;
sprot_desc Uncharacterized ATP-dependent helicase MTH_1802;
sprot_id sp|O27830|HELX_METTH;
sprot_target db:uniprot_sprot|sp|O27830|HELX_METTH 38 748 evalue:1.2e-69 qcov:88.10 identity:30.30;
tigrfam_acc TIGR04121;
tigrfam_desc DEXH box helicase, DNA ligase-associated;
tigrfam_name DEXH_lig_assoc;
tigrfam_target db:TIGRFAMs.hmm|TIGR04121 evalue:3.1e-289 score:960.3 best_domain_score:960.1 name:TIGR04121;
15514 15960 CDS
ID metaerg.pl|06399
allko_ids K09160;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798704.1 1 145 evalue:5.5e-70 qcov:98.00 identity:82.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF03692;
pfam_desc Putative zinc- or iron-chelating domain;
pfam_id CxxCxxCC;
pfam_target db:Pfam-A.hmm|PF03692.15 evalue:2e-07 score:30.8 best_domain_score:29.4 name:CxxCxxCC;
sprot_desc hypothetical protein;
sprot_id sp|O68068|Y2083_RHOCB;
sprot_target db:uniprot_sprot|sp|O68068|Y2083_RHOCB 3 143 evalue:4.9e-49 qcov:95.30 identity:63.80;
16924 15980 CDS
ID metaerg.pl|06400
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798700.1 1 308 evalue:4.8e-23 qcov:98.10 identity:40.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
18464 17079 CDS
ID metaerg.pl|06401
allgo_ids GO:0015562; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798698.1 1 461 evalue:1.7e-189 qcov:100.00 identity:81.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF02321;
pfam_desc Outer membrane efflux protein;
pfam_id OEP;
pfam_target db:Pfam-A.hmm|PF02321.18 evalue:3.2e-43 score:147.0 best_domain_score:85.4 name:OEP;
sp YES;
tigrfam_acc TIGR01844;
tigrfam_desc type I secretion outer membrane protein, TolC family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name type_I_sec_TolC;
tigrfam_sub1role Porins;
tigrfam_target db:TIGRFAMs.hmm|TIGR01844 evalue:2.9e-67 score:226.6 best_domain_score:226.3 name:TIGR01844;
17079 17159 signal_peptide
ID metaerg.pl|06402
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
19186 18533 CDS
ID metaerg.pl|06403
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798697.1 1 217 evalue:1.4e-82 qcov:100.00 identity:72.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF13649; PF05175; PF01135; PF00398;
pfam_desc Methyltransferase domain; Methyltransferase small domain; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Ribosomal RNA adenine dimethylase;
pfam_id Methyltransf_25; MTS; PCMT; RrnaAD;
pfam_target db:Pfam-A.hmm|PF13649.6 evalue:7.6e-07 score:29.0 best_domain_score:28.1 name:Methyltransf_25; db:Pfam-A.hmm|PF05175.14 evalue:1.8e-05 score:23.6 best_domain_score:22.9 name:MTS; db:Pfam-A.hmm|PF01135.19 evalue:2.9e-32 score:111.3 best_domain_score:111.0 name:PCMT; db:Pfam-A.hmm|PF00398.20 evalue:1.7e-09 score:36.4 best_domain_score:35.3 name:RrnaAD;
19294 19740 CDS
ID metaerg.pl|06404
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Halocynthiibacter_B;s__Halocynthiibacter_B arcticus;
genomedb_acc GCF_000812665.2;
genomedb_target db:genomedb|GCF_000812665.2|WP_039001868.1 1 148 evalue:4.8e-66 qcov:100.00 identity:82.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF11071;
pfam_desc Nucleoside 2-deoxyribosyltransferase YtoQ;
pfam_id Nuc_deoxyri_tr3;
pfam_target db:Pfam-A.hmm|PF11071.8 evalue:7.4e-63 score:210.0 best_domain_score:209.8 name:Nuc_deoxyri_tr3;
sprot_desc hypothetical protein;
sprot_id sp|O34305|YTOQ_BACSU;
sprot_target db:uniprot_sprot|sp|O34305|YTOQ_BACSU 1 141 evalue:1.9e-24 qcov:95.30 identity:42.00;
tigrfam_acc TIGR03646;
tigrfam_desc YtoQ family protein;
tigrfam_name YtoQ_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR03646 evalue:2.4e-64 score:214.9 best_domain_score:214.8 name:TIGR03646;
19846 20229 CDS
ID metaerg.pl|06405
allgo_ids GO:0005887; GO:0008381; GO:0034220;
allko_ids K03282;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470742.1 1 127 evalue:1.6e-46 qcov:100.00 identity:82.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF01741;
pfam_desc Large-conductance mechanosensitive channel, MscL;
pfam_id MscL;
pfam_target db:Pfam-A.hmm|PF01741.18 evalue:1.9e-40 score:137.1 best_domain_score:137.0 name:MscL;
sprot_desc Large-conductance mechanosensitive channel;
sprot_id sp|A8LLI0|MSCL_DINSH;
sprot_target db:uniprot_sprot|sp|A8LLI0|MSCL_DINSH 1 124 evalue:3.6e-16 qcov:97.60 identity:46.60;
tigrfam_acc TIGR00220;
tigrfam_desc large conductance mechanosensitive channel protein;
tigrfam_mainrole Cellular processes;
tigrfam_name mscL;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00220 evalue:1.3e-39 score:134.4 best_domain_score:134.3 name:TIGR00220;
tm_num 3;
19846 20229 transmembrane_helix
ID metaerg.pl|06406
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i19879-19947o19957-20025i20038-20106o;
20744 20286 CDS
ID metaerg.pl|06407
allgo_ids GO:0043565; GO:0003700;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470743.1 1 152 evalue:5.6e-70 qcov:100.00 identity:89.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF01037; PF08279; PF13412; PF13404; PF09339; PF01047; PF12802;
pfam_desc Lrp/AsnC ligand binding domain; HTH domain; Winged helix-turn-helix DNA-binding; AsnC-type helix-turn-helix domain; IclR helix-turn-helix domain; MarR family; MarR family;
pfam_id AsnC_trans_reg; HTH_11; HTH_24; HTH_AsnC-type; HTH_IclR; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF01037.21 evalue:1.5e-23 score:81.8 best_domain_score:81.1 name:AsnC_trans_reg; db:Pfam-A.hmm|PF08279.12 evalue:2.2e-06 score:26.8 best_domain_score:26.1 name:HTH_11; db:Pfam-A.hmm|PF13412.6 evalue:1.1e-21 score:75.3 best_domain_score:74.6 name:HTH_24; db:Pfam-A.hmm|PF13404.6 evalue:2.5e-19 score:68.1 best_domain_score:68.1 name:HTH_AsnC-type; db:Pfam-A.hmm|PF09339.10 evalue:4.1e-06 score:25.7 best_domain_score:22.9 name:HTH_IclR; db:Pfam-A.hmm|PF01047.22 evalue:2e-06 score:26.9 best_domain_score:26.3 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:2.9e-08 score:32.7 best_domain_score:31.9 name:MarR_2;
sprot_desc Bkd operon transcriptional regulator;
sprot_id sp|P42179|BKDR_PSEPU;
sprot_target db:uniprot_sprot|sp|P42179|BKDR_PSEPU 2 152 evalue:1.5e-29 qcov:99.30 identity:46.40;
20887 22005 CDS
ID metaerg.pl|06408
allec_ids 1.4.1.1;
allgo_ids GO:0051287; GO:0055114; GO:0000286; GO:0046872; GO:0000166; GO:0042853;
allko_ids K00325; K00324; K00323; K00322; K00259;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798691.1 1 372 evalue:1.4e-178 qcov:100.00 identity:86.60;
kegg_pathway_id 00720; 00760; 00430;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Nicotinate and nicotinamide metabolism; Taurine and hypotaurine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY1-2;
metacyc_pathway_name L-alanine degradation IV;;
metacyc_pathway_type ALANINE-DEG;;
pfam_acc PF02826; PF01262; PF05222; PF00070; PF01488;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; Pyridine nucleotide-disulphide oxidoreductase; Shikimate / quinate 5-dehydrogenase;
pfam_id 2-Hacid_dh_C; AlaDh_PNT_C; AlaDh_PNT_N; Pyr_redox; Shikimate_DH;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:2.1e-08 score:33.0 best_domain_score:31.6 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF01262.21 evalue:9.4e-81 score:269.4 best_domain_score:268.8 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF05222.15 evalue:7.9e-45 score:151.7 best_domain_score:150.2 name:AlaDh_PNT_N; db:Pfam-A.hmm|PF00070.27 evalue:2.6e-05 score:23.9 best_domain_score:22.9 name:Pyr_redox; db:Pfam-A.hmm|PF01488.20 evalue:9.7e-06 score:24.9 best_domain_score:24.0 name:Shikimate_DH;
sprot_desc Alanine dehydrogenase;
sprot_id sp|E1V931|DHA_HALED;
sprot_target db:uniprot_sprot|sp|E1V931|DHA_HALED 1 370 evalue:1.9e-118 qcov:99.50 identity:59.20;
tigrfam_acc TIGR00518;
tigrfam_desc alanine dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name alaDH;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00518 evalue:1.5e-156 score:520.1 best_domain_score:520.0 name:TIGR00518;
22129 22992 CDS
ID metaerg.pl|06409
allec_ids 3.-.-.-;
allgo_ids GO:0016787; GO:0046872;
allko_ids K01069; K01180; K01011;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470745.1 1 287 evalue:3.5e-153 qcov:100.00 identity:90.90;
kegg_pathway_id 00272; 00620;
kegg_pathway_name Cysteine metabolism; Pyruvate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:7.4e-23 score:80.8 best_domain_score:80.5 name:Lactamase_B;
sprot_desc Probable metallo-hydrolase BURPS1710b_2304;
sprot_id sp|Q3JRV4|Y2304_BURP1;
sprot_target db:uniprot_sprot|sp|Q3JRV4|Y2304_BURP1 5 287 evalue:1.4e-87 qcov:98.60 identity:53.20;
23062 23493 CDS
ID metaerg.pl|06410
allgo_ids GO:0016021; GO:0005886;
allko_ids K07112;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799267.1 2 143 evalue:4.5e-61 qcov:99.30 identity:87.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF04143;
pfam_desc Sulphur transport;
pfam_id Sulf_transp;
pfam_target db:Pfam-A.hmm|PF04143.14 evalue:1.8e-09 score:36.9 best_domain_score:32.6 name:Sulf_transp;
sprot_desc hypothetical protein;
sprot_id sp|Q87AD4|Y1892_XYLFT;
sprot_target db:uniprot_sprot|sp|Q87AD4|Y1892_XYLFT 4 129 evalue:1.1e-16 qcov:88.10 identity:39.70;
tm_num 4;
23062 23493 transmembrane_helix
ID metaerg.pl|06411
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i23080-23139o23218-23286i23305-23358o23401-23469i;
23493 23927 CDS
ID metaerg.pl|06412
allgo_ids GO:0016021; GO:0005886;
allko_ids K07112;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798686.1 1 143 evalue:1.2e-69 qcov:99.30 identity:90.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
sprot_desc hypothetical protein;
sprot_id sp|Q87AD3|Y1893_XYLFT;
sprot_target db:uniprot_sprot|sp|Q87AD3|Y1893_XYLFT 3 130 evalue:7.4e-18 qcov:88.90 identity:41.90;
tm_num 4;
23493 23927 transmembrane_helix
ID metaerg.pl|06413
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i23505-23561o23604-23672i23745-23813o23826-23894i;
23943 24368 CDS
ID metaerg.pl|06414
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798684.1 1 141 evalue:9.6e-56 qcov:100.00 identity:78.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF04273;
pfam_desc Putative phosphatase (DUF442);
pfam_id DUF442;
pfam_target db:Pfam-A.hmm|PF04273.13 evalue:3e-37 score:126.3 best_domain_score:125.9 name:DUF442;
tigrfam_acc TIGR01244;
tigrfam_desc TIGR01244 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR01244;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR01244 evalue:8.1e-43 score:144.9 best_domain_score:144.7 name:TIGR01244;
25157 24384 CDS
ID metaerg.pl|06415
allec_ids 2.4.2.-;
allgo_ids GO:0016787; GO:0033969; GO:0016740; GO:0006541;
allko_ids K07010;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797009.1 1 257 evalue:2.6e-136 qcov:100.00 identity:89.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id HISTSYN-PWY; PRPP-PWY; PWY-5800; PWY-5381;
metacyc_pathway_name L-histidine biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;; xylan biosynthesis;; pyridine nucleotide cycling (plants);;
metacyc_pathway_type HISTIDINE-SYN;; Super-Pathways;; SECONDARY-CELL-WALL;; NAD-Metabolism;;
pfam_acc PF00117; PF07722;
pfam_desc Glutamine amidotransferase class-I; Peptidase C26;
pfam_id GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00117.28 evalue:7.3e-09 score:34.9 best_domain_score:34.3 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:3.2e-59 score:199.5 best_domain_score:199.4 name:Peptidase_C26;
sprot_desc Putative glutamine amidotransferase Rv2859c;
sprot_id sp|O33341|Y2859_MYCTU;
sprot_target db:uniprot_sprot|sp|O33341|Y2859_MYCTU 3 247 evalue:9.1e-19 qcov:95.30 identity:31.00;
25833 25291 CDS
ID metaerg.pl|06416
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470758.1 1 180 evalue:1.6e-76 qcov:100.00 identity:78.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00583; PF13302;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_3;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:2.2e-06 score:27.1 best_domain_score:26.9 name:Acetyltransf_1; db:Pfam-A.hmm|PF13302.7 evalue:7.1e-23 score:81.0 best_domain_score:80.8 name:Acetyltransf_3;
26244 25975 CDS
ID metaerg.pl|06417
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02899;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797007.1 1 89 evalue:9.4e-41 qcov:100.00 identity:93.30;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF01016;
pfam_desc Ribosomal L27 protein;
pfam_id Ribosomal_L27;
pfam_target db:Pfam-A.hmm|PF01016.19 evalue:5.1e-35 score:118.6 best_domain_score:118.4 name:Ribosomal_L27;
sprot_desc 50S ribosomal protein L27;
sprot_id sp|A3PQI8|RL27_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PQI8|RL27_RHOS1 1 89 evalue:2.7e-34 qcov:100.00 identity:80.90;
tigrfam_acc TIGR00062;
tigrfam_desc ribosomal protein bL27;
tigrfam_mainrole Protein synthesis;
tigrfam_name L27;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00062 evalue:1.6e-32 score:110.5 best_domain_score:110.4 name:TIGR00062;
26943 26251 CDS
ID metaerg.pl|06418
allgo_ids GO:0005840; GO:0019843; GO:0003735; GO:0006412;
allko_ids K02888;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072247570.1 1 230 evalue:4.3e-106 qcov:100.00 identity:87.80;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00829;
pfam_desc Ribosomal prokaryotic L21 protein;
pfam_id Ribosomal_L21p;
pfam_target db:Pfam-A.hmm|PF00829.21 evalue:4.6e-33 score:112.7 best_domain_score:111.9 name:Ribosomal_L21p;
sprot_desc 50S ribosomal protein L21;
sprot_id sp|Q28Q15|RL21_JANSC;
sprot_target db:uniprot_sprot|sp|Q28Q15|RL21_JANSC 1 230 evalue:2.3e-69 qcov:100.00 identity:56.20;
tigrfam_acc TIGR00061;
tigrfam_desc ribosomal protein bL21;
tigrfam_mainrole Protein synthesis;
tigrfam_name L21;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00061 evalue:1.8e-28 score:98.1 best_domain_score:97.3 name:TIGR00061;
28715 27255 CDS
ID metaerg.pl|06419
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469713.1 1 486 evalue:6.8e-202 qcov:100.00 identity:77.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF07219; PF14559;
pfam_desc HemY protein N-terminus; Tetratricopeptide repeat;
pfam_id HemY_N; TPR_19;
pfam_target db:Pfam-A.hmm|PF07219.13 evalue:4.5e-21 score:74.3 best_domain_score:74.3 name:HemY_N; db:Pfam-A.hmm|PF14559.6 evalue:8.3e-07 score:28.7 best_domain_score:17.8 name:TPR_19;
tm_num 2;
28715 27255 transmembrane_helix
ID metaerg.pl|06420
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i27273-27332o27375-27443i;
30271 28727 CDS
ID metaerg.pl|06421
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798941.1 1 514 evalue:7.3e-61 qcov:100.00 identity:38.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
tm_num 1;
30271 28727 transmembrane_helix
ID metaerg.pl|06422
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i29279-29347o;
31069 30329 CDS
ID metaerg.pl|06423
allgo_ids GO:0004852; GO:0033014;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469711.1 2 241 evalue:8.3e-47 qcov:97.60 identity:46.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF02602;
pfam_desc Uroporphyrinogen-III synthase HemD;
pfam_id HEM4;
pfam_target db:Pfam-A.hmm|PF02602.15 evalue:1e-24 score:86.4 best_domain_score:86.2 name:HEM4;
31171 32280 CDS
ID metaerg.pl|06424
allec_ids 2.3.1.234;
allgo_ids GO:0005737; GO:0005506; GO:0004222; GO:0061711; GO:0002949;
allko_ids K01409;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798937.1 8 369 evalue:4.4e-161 qcov:98.10 identity:82.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00814;
pfam_desc Glycoprotease family;
pfam_id Peptidase_M22;
pfam_target db:Pfam-A.hmm|PF00814.25 evalue:9.4e-94 score:313.3 best_domain_score:313.1 name:Peptidase_M22;
sprot_desc tRNA N6-adenosine threonylcarbamoyltransferase;
sprot_id sp|A1B3J6|TSAD_PARDP;
sprot_target db:uniprot_sprot|sp|A1B3J6|TSAD_PARDP 10 369 evalue:2.2e-143 qcov:97.60 identity:75.90;
tigrfam_acc TIGR00329; TIGR03723;
tigrfam_desc metallohydrolase, glycoprotease/Kae1 family; tRNA threonylcarbamoyl adenosine modification protein TsaD;
tigrfam_mainrole Protein fate; Protein synthesis;
tigrfam_name gcp_kae1; T6A_TsaD_YgjD;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides; tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00329 evalue:1.8e-91 score:305.8 best_domain_score:305.6 name:TIGR00329; db:TIGRFAMs.hmm|TIGR03723 evalue:5e-118 score:392.9 best_domain_score:392.7 name:TIGR03723;
32277 33227 CDS
ID metaerg.pl|06425
allec_ids 1.1.1.94;
allgo_ids GO:0004367; GO:0005975; GO:0055114; GO:0009331; GO:0047952; GO:0051287; GO:0046167; GO:0046168; GO:0006650; GO:0008654;
allko_ids K00006; K00057;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798935.1 1 316 evalue:7.7e-130 qcov:100.00 identity:78.20;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY0-1319; PWY4FS-8; PHOSLIPSYN-PWY; PWY-5981; PWY4FS-7; PHOSLIPSYN2-PWY; PWY-5667;
metacyc_pathway_name CDP-diacylglycerol biosynthesis II;; phosphatidylglycerol biosynthesis II (non-plastidic);; superpathway of phospholipid biosynthesis I (bacteria);; CDP-diacylglycerol biosynthesis III;; phosphatidylglycerol biosynthesis I (plastidic);; superpathway of phospholipid biosynthesis II (plants);; CDP-diacylglycerol biosynthesis I;;
metacyc_pathway_type CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;;
pfam_acc PF03807; PF07479; PF01210;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus;
pfam_id F420_oxidored; NAD_Gly3P_dh_C; NAD_Gly3P_dh_N;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:5.3e-05 score:23.0 best_domain_score:21.8 name:F420_oxidored; db:Pfam-A.hmm|PF07479.14 evalue:3.4e-42 score:143.3 best_domain_score:142.6 name:NAD_Gly3P_dh_C; db:Pfam-A.hmm|PF01210.23 evalue:2.2e-30 score:104.9 best_domain_score:104.4 name:NAD_Gly3P_dh_N;
sp YES;
sprot_desc Glycerol-3-phosphate dehydrogenase [NAD(P)+];
sprot_id sp|Q5LLR6|GPDA_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LLR6|GPDA_RUEPO 1 316 evalue:2.4e-98 qcov:100.00 identity:61.90;
32277 32324 lipoprotein_signal_peptide
ID metaerg.pl|06426
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
33249 33524 CDS
ID metaerg.pl|06427
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469708.1 1 91 evalue:3.8e-37 qcov:100.00 identity:81.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF03795;
pfam_desc YCII-related domain;
pfam_id YCII;
pfam_target db:Pfam-A.hmm|PF03795.14 evalue:6.9e-19 score:67.3 best_domain_score:67.1 name:YCII;
33524 33943 CDS
ID metaerg.pl|06428
allgo_ids GO:0005634;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481001.1 1 139 evalue:2.7e-58 qcov:100.00 identity:74.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF01878;
pfam_desc EVE domain;
pfam_id EVE;
pfam_target db:Pfam-A.hmm|PF01878.18 evalue:4e-46 score:155.9 best_domain_score:155.7 name:EVE;
sprot_desc Thymocyte nuclear protein 1;
sprot_id sp|Q6PFL8|THYN1_DANRE;
sprot_target db:uniprot_sprot|sp|Q6PFL8|THYN1_DANRE 4 139 evalue:2.2e-19 qcov:97.80 identity:36.90;
33940 34578 CDS
ID metaerg.pl|06429
allec_ids 3.1.26.4;
allgo_ids GO:0005737; GO:0030145; GO:0003723; GO:0004523; GO:0006401;
allko_ids K03470;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter saemankumensis;
genomedb_acc GCF_900100005.1;
genomedb_target db:genomedb|GCF_900100005.1|WP_090029358.1 10 210 evalue:8.1e-67 qcov:94.80 identity:68.20;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF01351;
pfam_desc Ribonuclease HII;
pfam_id RNase_HII;
pfam_target db:Pfam-A.hmm|PF01351.18 evalue:6.8e-40 score:136.3 best_domain_score:136.0 name:RNase_HII;
sprot_desc Ribonuclease HII;
sprot_id sp|Q1GD84|RNH2_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GD84|RNH2_RUEST 12 210 evalue:1.2e-61 qcov:93.90 identity:62.80;
35170 36375 CDS
ID metaerg.pl|06430
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480010.1 3 398 evalue:3.3e-133 qcov:98.80 identity:62.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF13437; PF16576;
pfam_desc HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF13437.6 evalue:2.6e-15 score:56.3 best_domain_score:43.0 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:8.4e-21 score:73.4 best_domain_score:70.9 name:HlyD_D23;
sp YES;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:2e-64 score:216.8 best_domain_score:216.5 name:TIGR01730;
tm_num 1;
35170 35235 signal_peptide
ID metaerg.pl|06431
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
35170 36375 transmembrane_helix
ID metaerg.pl|06432
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i35188-35256o;
36379 39525 CDS
ID metaerg.pl|06433
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886;
allko_ids K18138;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084635073.1 17 1048 evalue:0.0e+00 qcov:98.50 identity:83.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00873; PF03176;
pfam_desc AcrB/AcrD/AcrF family; MMPL family;
pfam_id ACR_tran; MMPL;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:1.3e-261 score:869.8 best_domain_score:869.6 name:ACR_tran; db:Pfam-A.hmm|PF03176.15 evalue:1e-07 score:30.5 best_domain_score:20.3 name:MMPL;
sprot_desc Uncharacterized transporter HI_0895;
sprot_id sp|Q57124|Y895_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57124|Y895_HAEIN 24 1022 evalue:2.0e-125 qcov:95.30 identity:31.60;
tm_num 12;
36379 39525 transmembrane_helix
ID metaerg.pl|06434
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i36466-36534o37408-37476i37495-37563o37573-37641i37708-37776o37804-37872i37981-38049o38962-39021i39040-39108o39136-39204i39262-39330o39373-39441i;
41212 39527 CDS
ID metaerg.pl|06435
allgo_ids GO:0006812; GO:0015299; GO:0016021; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796890.1 1 552 evalue:1.3e-268 qcov:98.40 identity:89.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00999; PF02254;
pfam_desc Sodium/hydrogen exchanger family; TrkA-N domain;
pfam_id Na_H_Exchanger; TrkA_N;
pfam_target db:Pfam-A.hmm|PF00999.21 evalue:2.3e-45 score:154.3 best_domain_score:153.9 name:Na_H_Exchanger; db:Pfam-A.hmm|PF02254.18 evalue:4.2e-15 score:55.2 best_domain_score:54.4 name:TrkA_N;
tm_num 12;
41212 39527 transmembrane_helix
ID metaerg.pl|06436
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology o39536-39604i39623-39691o39704-39772i39791-39859o39872-39940i39977-40045o40082-40150i40187-40255o40346-40405i40424-40492o40520-40588i40607-40666o;
41478 42515 CDS
ID metaerg.pl|06437
allgo_ids GO:0000902; GO:0005737; GO:0005524; GO:0008360;
allko_ids K03569;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468985.1 1 345 evalue:7.3e-182 qcov:100.00 identity:97.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00022; PF14450; PF00012; PF06723; PF11104;
pfam_desc Actin; Cell division protein FtsA; Hsp70 protein; MreB/Mbl protein; Type IV pilus assembly protein PilM;;
pfam_id Actin; FtsA; HSP70; MreB_Mbl; PilM_2;
pfam_target db:Pfam-A.hmm|PF00022.19 evalue:1.4e-11 score:42.9 best_domain_score:32.6 name:Actin; db:Pfam-A.hmm|PF14450.6 evalue:4.9e-10 score:39.0 best_domain_score:38.3 name:FtsA; db:Pfam-A.hmm|PF00012.20 evalue:1.5e-09 score:35.9 best_domain_score:32.7 name:HSP70; db:Pfam-A.hmm|PF06723.13 evalue:1.4e-140 score:467.0 best_domain_score:466.8 name:MreB_Mbl; db:Pfam-A.hmm|PF11104.8 evalue:1.5e-08 score:33.3 best_domain_score:18.0 name:PilM_2;
sprot_desc Cell shape-determining protein MreB;
sprot_id sp|A0A0H3C7V4|MREB_CAUVN;
sprot_target db:uniprot_sprot|sp|A0A0H3C7V4|MREB_CAUVN 4 342 evalue:1.3e-121 qcov:98.30 identity:67.30;
tigrfam_acc TIGR00904;
tigrfam_desc cell shape determining protein, MreB/Mrl family;
tigrfam_mainrole Cell envelope;
tigrfam_name mreB;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00904 evalue:1.8e-144 score:480.0 best_domain_score:479.8 name:TIGR00904;
42541 43452 CDS
ID metaerg.pl|06438
allgo_ids GO:0008360; GO:0009276; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796998.1 1 303 evalue:5.5e-141 qcov:100.00 identity:86.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF04085;
pfam_desc rod shape-determining protein MreC;
pfam_id MreC;
pfam_target db:Pfam-A.hmm|PF04085.14 evalue:9.2e-29 score:99.5 best_domain_score:99.0 name:MreC;
sprot_desc Cell shape-determining protein MreC;
sprot_id sp|Q70AN6|MREC_RHOSH;
sprot_target db:uniprot_sprot|sp|Q70AN6|MREC_RHOSH 1 303 evalue:4.4e-113 qcov:100.00 identity:68.00;
tm_num 1;
42541 43452 transmembrane_helix
ID metaerg.pl|06439
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i42595-42648o;
43445 44044 CDS
ID metaerg.pl|06440
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796997.1 1 199 evalue:1.1e-65 qcov:100.00 identity:68.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
tm_num 3;
43445 44044 transmembrane_helix
ID metaerg.pl|06441
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology o43472-43531i43829-43897o43925-43993i;
44041 45978 CDS
ID metaerg.pl|06442
allec_ids 3.4.16.4;
allgo_ids GO:0008658; GO:0005887; GO:0071972; GO:0009002; GO:0071555; GO:0009252; GO:0008360;
allko_ids K05364; K08384; K12556; K03587; K08884; K05515;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796996.1 1 645 evalue:0.0e+00 qcov:100.00 identity:87.80;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY-5265; PWY-6471; PEPTIDOGLYCANSYN-PWY;
metacyc_pathway_name peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF03717; PF00905;
pfam_desc Penicillin-binding Protein dimerisation domain; Penicillin binding protein transpeptidase domain;
pfam_id PBP_dimer; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF03717.15 evalue:2.3e-38 score:131.6 best_domain_score:130.7 name:PBP_dimer; db:Pfam-A.hmm|PF00905.22 evalue:1e-59 score:201.5 best_domain_score:201.2 name:Transpeptidase;
sprot_desc Peptidoglycan D,D-transpeptidase MrdA;
sprot_id sp|P44469|MRDA_HAEIN;
sprot_target db:uniprot_sprot|sp|P44469|MRDA_HAEIN 6 633 evalue:7.0e-100 qcov:97.40 identity:35.50;
tigrfam_acc TIGR03423;
tigrfam_desc penicillin-binding protein 2;
tigrfam_mainrole Cell envelope;
tigrfam_name pbp2_mrdA;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR03423 evalue:3.8e-211 score:701.9 best_domain_score:701.7 name:TIGR03423;
tm_num 1;
44041 45978 transmembrane_helix
ID metaerg.pl|06443
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i44098-44151o;
45975 47123 CDS
ID metaerg.pl|06444
allec_ids 2.4.1.129;
allgo_ids GO:0016021; GO:0051301; GO:0005887; GO:0008955; GO:0071555; GO:0009252; GO:0008360;
allko_ids K05837;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796995.1 1 382 evalue:1.6e-190 qcov:100.00 identity:88.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6470; PWY-6385; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01098;
pfam_desc Cell cycle protein;
pfam_id FTSW_RODA_SPOVE;
pfam_target db:Pfam-A.hmm|PF01098.19 evalue:1.1e-91 score:306.7 best_domain_score:306.4 name:FTSW_RODA_SPOVE;
sprot_desc Peptidoglycan glycosyltransferase MrdB;
sprot_id sp|P0ABG8|RODA_ECO57;
sprot_target db:uniprot_sprot|sp|P0ABG8|RODA_ECO57 19 380 evalue:9.3e-68 qcov:94.80 identity:42.60;
tigrfam_acc TIGR02210;
tigrfam_desc rod shape-determining protein RodA;
tigrfam_mainrole Cellular processes;
tigrfam_name rodA_shape;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR02210 evalue:3.2e-121 score:404.0 best_domain_score:403.8 name:TIGR02210;
tm_num 8;
45975 47123 transmembrane_helix
ID metaerg.pl|06445
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i46035-46103o46146-46205i46218-46286o46404-46463i46482-46550o46833-46901i46920-46988o47016-47084i;
47120 48052 CDS
ID metaerg.pl|06446
allec_ids 1.1.1.79;
allgo_ids GO:0051287; GO:0055114; GO:0005737; GO:0005886; GO:0030267; GO:0016618;
allko_ids K12972; K00058;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796994.1 1 310 evalue:4.5e-122 qcov:100.00 identity:72.60;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF02826; PF03446;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id 2-Hacid_dh_C; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:1.7e-43 score:147.3 best_domain_score:146.8 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF03446.15 evalue:3.8e-07 score:29.6 best_domain_score:29.0 name:NAD_binding_2;
sprot_desc Glyoxylate/hydroxypyruvate reductase A;
sprot_id sp|A8GD46|GHRA_SERP5;
sprot_target db:uniprot_sprot|sp|A8GD46|GHRA_SERP5 62 310 evalue:5.1e-48 qcov:80.30 identity:42.40;
48191 48766 CDS
ID metaerg.pl|06447
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796993.1 17 191 evalue:1.2e-40 qcov:91.60 identity:55.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
tm_num 1;
48191 48766 transmembrane_helix
ID metaerg.pl|06448
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology o48248-48307i;
48930 50165 CDS
ID metaerg.pl|06449
allec_ids 1.4.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0008718; GO:0055130;
allko_ids K00285;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797091.1 2 411 evalue:2.1e-167 qcov:99.80 identity:73.20;
kegg_pathway_id 00360; 00910;
kegg_pathway_name Phenylalanine metabolism; Nitrogen metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY-6422;
metacyc_pathway_name D-arginine degradation;;
metacyc_pathway_type D-Amino-Acid-Degradation;;
pfam_acc PF02558; PF01266; PF00890; PF13450; PF07992;
pfam_desc Ketopantoate reductase PanE/ApbA; FAD dependent oxidoreductase; FAD binding domain; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id ApbA; DAO; FAD_binding_2; NAD_binding_8; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF02558.16 evalue:3e-05 score:22.9 best_domain_score:22.1 name:ApbA; db:Pfam-A.hmm|PF01266.24 evalue:4.1e-57 score:193.6 best_domain_score:193.3 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:3.4e-05 score:22.3 best_domain_score:19.2 name:FAD_binding_2; db:Pfam-A.hmm|PF13450.6 evalue:3.1e-06 score:26.6 best_domain_score:24.9 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:7.3e-08 score:31.2 best_domain_score:21.5 name:Pyr_redox_2;
sp YES;
sprot_desc D-amino acid dehydrogenase;
sprot_id sp|B7VMK8|DADA_VIBTL;
sprot_target db:uniprot_sprot|sp|B7VMK8|DADA_VIBTL 7 407 evalue:4.0e-24 qcov:97.60 identity:25.20;
48930 48986 lipoprotein_signal_peptide
ID metaerg.pl|06450
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
50947 50144 CDS
ID metaerg.pl|06451
allgo_ids GO:0005887; GO:0042626; GO:0043190; GO:0055085; GO:0005886; GO:0010043; GO:0006829;
allko_ids K09816;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797092.1 1 267 evalue:9.8e-110 qcov:100.00 identity:86.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00950;
pfam_desc ABC 3 transport family;
pfam_id ABC-3;
pfam_target db:Pfam-A.hmm|PF00950.17 evalue:1.4e-69 score:233.7 best_domain_score:233.5 name:ABC-3;
sprot_desc High-affinity zinc uptake system membrane protein ZnuB;
sprot_id sp|P44691|ZNUB_HAEIN;
sprot_target db:uniprot_sprot|sp|P44691|ZNUB_HAEIN 4 254 evalue:7.0e-38 qcov:94.00 identity:36.90;
tm_num 7;
50947 50144 transmembrane_helix
ID metaerg.pl|06452
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology o50171-50230i50267-50368o50396-50464i50501-50569o50672-50740i50777-50845o50858-50926i;
51695 50940 CDS
ID metaerg.pl|06453
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015633;
allko_ids K02049; K01995; K10111; K01998; K02000; K02023; K02010; K09817; K05847; K02052; K02006; K02045; K02071; K06861; K01996;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796992.1 1 241 evalue:8.3e-111 qcov:96.00 identity:84.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-6166; PWY-6188; PWY-6171; PWY-6135;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; ; ; ; ;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1e-09 score:37.9 best_domain_score:23.7 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:6.5e-28 score:97.2 best_domain_score:96.7 name:ABC_tran;
sprot_desc Zinc import ATP-binding protein ZnuC;
sprot_id sp|Q3IWB5|ZNUC_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IWB5|ZNUC_RHOS4 1 224 evalue:1.3e-78 qcov:89.20 identity:66.10;
52189 51692 CDS
ID metaerg.pl|06454
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796991.1 1 163 evalue:2.4e-66 qcov:98.80 identity:79.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF01475;
pfam_desc Ferric uptake regulator family;
pfam_id FUR;
pfam_target db:Pfam-A.hmm|PF01475.19 evalue:5.9e-10 score:38.6 best_domain_score:38.3 name:FUR;
52260 53369 CDS
ID metaerg.pl|06455
allgo_ids GO:0030001; GO:0046872; GO:0042597; GO:0008270; GO:0007155; GO:0006829;
allko_ids K09815;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796990.1 1 369 evalue:7.3e-148 qcov:100.00 identity:74.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF01297;
pfam_desc Zinc-uptake complex component A periplasmic;
pfam_id ZnuA;
pfam_target db:Pfam-A.hmm|PF01297.17 evalue:7e-62 score:208.4 best_domain_score:208.1 name:ZnuA;
sp YES;
sprot_desc High-affinity zinc uptake system protein ZnuA;
sprot_id sp|P39172|ZNUA_ECOLI;
sprot_target db:uniprot_sprot|sp|P39172|ZNUA_ECOLI 6 369 evalue:2.7e-24 qcov:98.60 identity:29.70;
52260 52313 signal_peptide
ID metaerg.pl|06456
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
53430 54383 CDS
ID metaerg.pl|06457
allec_ids 1.17.7.4; 1.17.1.2;
allgo_ids GO:0019288; GO:0046872; GO:0050992; GO:0051745; GO:0051539; GO:0016114;
allko_ids K03527;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469162.1 1 317 evalue:2.2e-161 qcov:100.00 identity:90.90;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY-5121; PWY-6270; NONMEVIPP-PWY;
metacyc_pathway_name superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; isoprene biosynthesis I;; methylerythritol phosphate pathway I;;
metacyc_pathway_type DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; ISOPRENOIDS; Super-Pathways;; MEP-Pathways;;
pfam_acc PF02401;
pfam_desc LytB protein;
pfam_id LYTB;
pfam_target db:Pfam-A.hmm|PF02401.18 evalue:2.3e-85 score:285.3 best_domain_score:285.1 name:LYTB;
sprot_desc 4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
sprot_id sp|A8LLC7|ISPH_DINSH;
sprot_target db:uniprot_sprot|sp|A8LLC7|ISPH_DINSH 4 317 evalue:6.4e-155 qcov:99.10 identity:86.30;
tigrfam_acc TIGR00216;
tigrfam_desc 4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ispH_lytB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00216 evalue:6.8e-95 score:316.6 best_domain_score:316.4 name:TIGR00216;
54383 54832 CDS
ID metaerg.pl|06458
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469015.1 1 149 evalue:5.2e-52 qcov:100.00 identity:71.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF11911;
pfam_desc Protein of unknown function (DUF3429);
pfam_id DUF3429;
pfam_target db:Pfam-A.hmm|PF11911.8 evalue:3e-30 score:104.6 best_domain_score:104.4 name:DUF3429;
tm_num 4;
54383 54832 transmembrane_helix
ID metaerg.pl|06459
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i54401-54469o54512-54580i54638-54715o54758-54826i;
54866 55471 CDS
ID metaerg.pl|06460
allgo_ids GO:0005515;
allko_ids K00799; K04097;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796987.1 1 201 evalue:9.4e-81 qcov:100.00 identity:74.10;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00043; PF13410; PF14497; PF02798; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_2; GST_C_3; GST_N; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:9e-13 score:47.5 best_domain_score:47.1 name:GST_C; db:Pfam-A.hmm|PF13410.6 evalue:1.5e-07 score:30.6 best_domain_score:29.6 name:GST_C_2; db:Pfam-A.hmm|PF14497.6 evalue:2.7e-08 score:33.2 best_domain_score:32.6 name:GST_C_3; db:Pfam-A.hmm|PF02798.20 evalue:1.1e-09 score:37.7 best_domain_score:37.0 name:GST_N; db:Pfam-A.hmm|PF13417.6 evalue:3e-10 score:39.6 best_domain_score:38.5 name:GST_N_3;
55464 55925 CDS
ID metaerg.pl|06461
allec_ids 3.1.26.4;
allgo_ids GO:0003676; GO:0004523; GO:0005737; GO:0000287; GO:0006401;
allko_ids K03469;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246019.1 2 153 evalue:4.5e-75 qcov:99.30 identity:88.80;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00075;
pfam_desc RNase H;
pfam_id RNase_H;
pfam_target db:Pfam-A.hmm|PF00075.24 evalue:1.3e-51 score:173.8 best_domain_score:173.7 name:RNase_H;
sprot_desc Ribonuclease H;
sprot_id sp|A1B840|RNH_PARDP;
sprot_target db:uniprot_sprot|sp|A1B840|RNH_PARDP 1 152 evalue:8.0e-71 qcov:99.30 identity:81.60;
55922 56545 CDS
ID metaerg.pl|06462
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480984.1 1 206 evalue:3.5e-91 qcov:99.50 identity:85.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF03458;
pfam_desc UPF0126 domain;
pfam_id UPF0126;
pfam_target db:Pfam-A.hmm|PF03458.13 evalue:2.6e-34 score:116.2 best_domain_score:65.6 name:UPF0126;
sprot_desc hypothetical protein;
sprot_id sp|P45122|Y1240_HAEIN;
sprot_target db:uniprot_sprot|sp|P45122|Y1240_HAEIN 16 200 evalue:1.3e-23 qcov:89.40 identity:41.10;
tm_num 6;
55922 56545 transmembrane_helix
ID metaerg.pl|06463
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i55940-55999o56009-56077i56090-56158o56186-56254i56267-56335o56393-56461i;
57093 56554 CDS
ID metaerg.pl|06464
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469023.1 1 178 evalue:1.5e-77 qcov:99.40 identity:83.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
sp YES;
56554 56637 signal_peptide
ID metaerg.pl|06465
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
57259 58278 CDS
ID metaerg.pl|06466
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469163.1 6 338 evalue:7.5e-139 qcov:98.20 identity:73.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF06089;
pfam_desc L-asparaginase II;
pfam_id Asparaginase_II;
pfam_target db:Pfam-A.hmm|PF06089.12 evalue:3.7e-101 score:337.6 best_domain_score:337.4 name:Asparaginase_II;
58381 58707 CDS
ID metaerg.pl|06467
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
58791 60077 CDS
ID metaerg.pl|06468
allec_ids 2.5.1.-;
allgo_ids GO:0009058; GO:0030170; GO:0016765; GO:0009086;
allko_ids K01740;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796981.1 1 426 evalue:3.9e-225 qcov:99.50 identity:90.40;
kegg_pathway_id 00271; 00272;
kegg_pathway_name Methionine metabolism; Cysteine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY-5899; PWY-5838; PWY-5064; PWY-4502; PWY-5134; PWY-6520; PWY-5817; PWY-6403; PWY-5133; PWY-5864; PWY-6129; PWY-6383; PWY-5893; PWY-5027; PWY-5861; PWY-724; PWY-6262; POLYISOPRENSYN-PWY; PWY-5805; PWY-5783; PWY-5132; PWY-5808; PWY-5897; PWY-6263; PWY-5816; PWY-5863; PWY-5898; PWY-5068; PWY-2681; PWY-5896; PWY-5862; PWY-5845; PWY-5140; PWY-5701; PWY-6404; PWY-5806; PWY-5135;
metacyc_pathway_name superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; tridecaprenyl diphosphate biosynthesis;; phylloquinol biosynthesis;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; demethylmenaquinol-8 biosynthesis II;; polyisoprenoid biosynthesis (E. coli);; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; lupulone and humulone biosynthesis;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-12 biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; cannabinoid biosynthesis;; shikonin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; xanthohumol biosynthesis;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; TERPENOPHENOLICS-SYN;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; PRENYLFLAVONOID-SYN;;
pfam_acc PF00155; PF01053; PF01041;
pfam_desc Aminotransferase class I and II; Cys/Met metabolism PLP-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; Cys_Met_Meta_PP; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:7.4e-06 score:24.6 best_domain_score:23.9 name:Aminotran_1_2; db:Pfam-A.hmm|PF01053.20 evalue:8.3e-126 score:418.8 best_domain_score:418.6 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF01041.17 evalue:1.3e-10 score:40.4 best_domain_score:39.9 name:DegT_DnrJ_EryC1;
sprot_desc O-acetyl-L-homoserine sulfhydrylase 1;
sprot_id sp|Q5SK88|METY1_THET8;
sprot_target db:uniprot_sprot|sp|Q5SK88|METY1_THET8 8 424 evalue:6.4e-110 qcov:97.40 identity:49.60;
tigrfam_acc TIGR01326;
tigrfam_desc O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name OAH_OAS_sulfhy;
tigrfam_sub1role Serine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01326 evalue:8.7e-176 score:583.8 best_domain_score:583.6 name:TIGR01326;
60187 63051 CDS
ID metaerg.pl|06469
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796980.1 1 954 evalue:2.6e-173 qcov:100.00 identity:44.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
tm_num 1;
60187 63051 transmembrane_helix
ID metaerg.pl|06470
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i61561-61629o;
63093 63704 CDS
ID metaerg.pl|06471
allgo_ids GO:0016021; GO:0005887; GO:0000917;
allko_ids K06190;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796979.1 7 203 evalue:5.9e-91 qcov:97.00 identity:85.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF04279;
pfam_desc Intracellular septation protein A;
pfam_id IspA;
pfam_target db:Pfam-A.hmm|PF04279.15 evalue:5e-47 score:159.6 best_domain_score:159.4 name:IspA;
sprot_desc Probable intracellular septation protein A;
sprot_id sp|C0RFI0|YCIB_BRUMB;
sprot_target db:uniprot_sprot|sp|C0RFI0|YCIB_BRUMB 3 203 evalue:2.2e-31 qcov:99.00 identity:38.50;
tm_num 6;
63093 63704 transmembrane_helix
ID metaerg.pl|06472
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology o63120-63188i63225-63293o63321-63374i63411-63470o63513-63581i63600-63659o;
65139 63745 CDS
ID metaerg.pl|06473
allec_ids 4.2.1.2;
allgo_ids GO:0006099; GO:0016829; GO:0045239; GO:0004333; GO:0006106;
allko_ids K01744; K01679; K01857; K01756;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797130.1 1 464 evalue:5.2e-260 qcov:100.00 identity:96.10;
kegg_pathway_id 00020; 00230; 00720; 00252; 00362; 00910;
kegg_pathway_name Citrate cycle (TCA cycle); Purine metabolism; Reductive carboxylate cycle (CO2 fixation); Alanine and aspartate metabolism; Benzoate degradation via hydroxylation; Nitrogen metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id FERMENTATION-PWY; PWY-5392; REDCITCYC; PWY-561; GLYCOLYSIS-TCA-GLYOX-BYPASS; P23-PWY; PWY-5464; PWY-6146; PWY-5690; P105-PWY; ANARESP1-PWY; TCA-GLYOX-BYPASS; TCA; P42-PWY; P108-PWY; PWY-5913;
metacyc_pathway_name mixed acid fermentation;; reductive TCA cycle II;; TCA cycle VIII (Helicobacter);; superpathway of glyoxylate cycle and fatty acid degradation;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; reductive TCA cycle I;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; TCA cycle II (plants and fungi);; TCA cycle IV (2-oxoglutarate decarboxylase);; ; superpathway of glyoxylate bypass and TCA;; TCA cycle I (prokaryotic);; incomplete reductive TCA cycle;; pyruvate fermentation to propanoate I;; partial TCA cycle (obligate autotrophs);;
metacyc_pathway_type Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Reductive-TCA-Cycles;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Biosynthesis; Super-Pathways;; TCA-VARIANTS;; TCA-VARIANTS;; ; Super-Pathways; TCA-VARIANTS;; TCA-VARIANTS;; Reductive-TCA-Cycles;; Pyruvate-Propanoate-Fermentation;; TCA-VARIANTS;;
pfam_acc PF10415; PF00206;
pfam_desc Fumarase C C-terminus; Lyase;
pfam_id FumaraseC_C; Lyase_1;
pfam_target db:Pfam-A.hmm|PF10415.9 evalue:8.2e-23 score:79.8 best_domain_score:78.8 name:FumaraseC_C; db:Pfam-A.hmm|PF00206.20 evalue:4.3e-111 score:370.5 best_domain_score:370.0 name:Lyase_1;
sprot_desc Fumarate hydratase class II;
sprot_id sp|Q92PB6|FUMC_RHIME;
sprot_target db:uniprot_sprot|sp|Q92PB6|FUMC_RHIME 1 462 evalue:3.9e-185 qcov:99.60 identity:71.20;
tigrfam_acc TIGR00979;
tigrfam_desc fumarate hydratase, class II;
tigrfam_mainrole Energy metabolism;
tigrfam_name fumC_II;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR00979 evalue:1.2e-219 score:728.9 best_domain_score:728.8 name:TIGR00979;
65679 65227 CDS
ID metaerg.pl|06474
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797129.1 1 150 evalue:1.1e-73 qcov:100.00 identity:89.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF04386;
pfam_desc Stringent starvation protein B;
pfam_id SspB;
pfam_target db:Pfam-A.hmm|PF04386.13 evalue:1.1e-43 score:148.1 best_domain_score:147.9 name:SspB;
66047 65817 CDS
ID metaerg.pl|06475
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470649.1 1 69 evalue:3.7e-22 qcov:90.80 identity:81.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF13467;
pfam_desc Ribbon-helix-helix domain;
pfam_id RHH_4;
pfam_target db:Pfam-A.hmm|PF13467.6 evalue:1.6e-23 score:81.6 best_domain_score:81.5 name:RHH_4;
67047 66697 CDS
ID metaerg.pl|06476
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799448.1 1 116 evalue:1.3e-45 qcov:100.00 identity:75.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
67422 67102 CDS
ID metaerg.pl|06477
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798447.1 1 93 evalue:2.7e-26 qcov:87.70 identity:75.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
70151 67419 CDS
ID metaerg.pl|06478
allec_ids 5.6.2.3; 5.99.1.3;
allgo_ids GO:0003677; GO:0003916; GO:0005524; GO:0005694; GO:0006265; GO:0005737; GO:0003918; GO:0006261;
allko_ids K02469;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480526.1 11 904 evalue:0.0e+00 qcov:98.20 identity:93.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF03989; PF00521;
pfam_desc DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A;
pfam_id DNA_gyraseA_C; DNA_topoisoIV;
pfam_target db:Pfam-A.hmm|PF03989.13 evalue:1.7e-59 score:196.3 best_domain_score:56.5 name:DNA_gyraseA_C; db:Pfam-A.hmm|PF00521.20 evalue:6.5e-149 score:495.7 best_domain_score:495.4 name:DNA_topoisoIV;
sprot_desc DNA gyrase subunit A;
sprot_id sp|Q0BST5|GYRA_GRABC;
sprot_target db:uniprot_sprot|sp|Q0BST5|GYRA_GRABC 24 910 evalue:5.3e-271 qcov:97.50 identity:55.50;
tigrfam_acc TIGR01063;
tigrfam_desc DNA gyrase, A subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name gyrA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01063 evalue:0 score:1103.6 best_domain_score:1103.3 name:TIGR01063;
70346 70645 CDS
ID metaerg.pl|06479
allgo_ids GO:0000162;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798443.1 1 99 evalue:4.1e-45 qcov:100.00 identity:85.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF06233;
pfam_desc Usg-like family;
pfam_id Usg;
pfam_target db:Pfam-A.hmm|PF06233.12 evalue:4.6e-38 score:128.5 best_domain_score:128.3 name:Usg;
sprot_desc hypothetical protein;
sprot_id sp|P12288|USG_CAUVC;
sprot_target db:uniprot_sprot|sp|P12288|USG_CAUVC 1 86 evalue:2.4e-20 qcov:86.90 identity:52.30;
71094 70642 CDS
ID metaerg.pl|06480
allgo_ids GO:0015035; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798441.1 1 150 evalue:1.4e-60 qcov:100.00 identity:76.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF02600;
pfam_desc Disulfide bond formation protein DsbB;
pfam_id DsbB;
pfam_target db:Pfam-A.hmm|PF02600.16 evalue:1.6e-34 score:118.6 best_domain_score:118.5 name:DsbB;
tm_num 3;
71094 70642 transmembrane_helix
ID metaerg.pl|06481
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i70660-70728o70771-70839i71008-71076o;
71672 71094 CDS
ID metaerg.pl|06482
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798439.1 1 192 evalue:3.0e-84 qcov:100.00 identity:87.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF09335;
pfam_desc SNARE associated Golgi protein;
pfam_id SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF09335.11 evalue:1.6e-11 score:44.0 best_domain_score:44.0 name:SNARE_assoc;
tm_num 4;
71672 71094 transmembrane_helix
ID metaerg.pl|06483
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i71250-71318o71406-71474i71493-71561o71589-71657i;
72385 71747 CDS
ID metaerg.pl|06484
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798438.1 1 212 evalue:2.9e-96 qcov:100.00 identity:86.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF03886;
pfam_desc ABC-type transport auxiliary lipoprotein component;
pfam_id ABC_trans_aux;
pfam_target db:Pfam-A.hmm|PF03886.13 evalue:3.3e-15 score:55.2 best_domain_score:55.0 name:ABC_trans_aux;
sp YES;
71747 71830 signal_peptide
ID metaerg.pl|06485
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
74094 72382 CDS
ID metaerg.pl|06486
allko_ids K02067;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798436.1 1 570 evalue:1.2e-250 qcov:100.00 identity:83.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF06103; PF02470;
pfam_desc Bacterial protein of unknown function (DUF948); MlaD protein;
pfam_id DUF948; MlaD;
pfam_target db:Pfam-A.hmm|PF06103.11 evalue:1.5e-09 score:37.3 best_domain_score:15.3 name:DUF948; db:Pfam-A.hmm|PF02470.20 evalue:2.7e-15 score:55.7 best_domain_score:54.4 name:MlaD;
tm_num 1;
74094 72382 transmembrane_helix
ID metaerg.pl|06487
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i72400-72468o;
74874 74098 CDS
ID metaerg.pl|06488
allgo_ids GO:0005524; GO:0016887;
allko_ids K02068; K11072; K02045; K01996; K02071; K06861; K02017; K02052; K02006; K02003; K01997; K05847; K02010; K02000; K02023; K05816; K02031; K01998; K10111; K02065; K01995; K02049;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798433.1 1 258 evalue:4.0e-132 qcov:100.00 identity:92.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.1e-10 score:41.1 best_domain_score:27.4 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:4.3e-30 score:104.2 best_domain_score:103.8 name:ABC_tran;
sprot_desc Probable ribonucleotide transport ATP-binding protein mkl;
sprot_id sp|P30769|MKL_MYCLE;
sprot_target db:uniprot_sprot|sp|P30769|MKL_MYCLE 6 246 evalue:6.3e-44 qcov:93.40 identity:39.70;
76029 74878 CDS
ID metaerg.pl|06489
allgo_ids GO:0043190;
allko_ids K02066;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798431.1 1 383 evalue:7.1e-146 qcov:100.00 identity:76.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF02405; PF01740; PF13466;
pfam_desc Permease MlaE; STAS domain; STAS domain;
pfam_id MlaE; STAS; STAS_2;
pfam_target db:Pfam-A.hmm|PF02405.16 evalue:9.4e-72 score:240.3 best_domain_score:239.7 name:MlaE; db:Pfam-A.hmm|PF01740.21 evalue:5.9e-05 score:21.9 best_domain_score:21.0 name:STAS; db:Pfam-A.hmm|PF13466.6 evalue:3.2e-10 score:39.4 best_domain_score:38.0 name:STAS_2;
tigrfam_acc TIGR00056;
tigrfam_desc ABC transport permease subunit;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00056;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00056 evalue:1.1e-68 score:230.8 best_domain_score:230.5 name:TIGR00056;
tm_num 7;
76029 74878 transmembrane_helix
ID metaerg.pl|06490
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology o75265-75333i75394-75462o75505-75573i75658-75726o75736-75804i75841-75909o75952-76020i;
76177 77259 CDS
ID metaerg.pl|06491
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus alcaliphilus;
genomedb_acc GCF_900110285.1;
genomedb_target db:genomedb|GCF_900110285.1|WP_090611427.1 12 360 evalue:5.0e-101 qcov:96.90 identity:52.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF08885;
pfam_desc GSCFA family;
pfam_id GSCFA;
pfam_target db:Pfam-A.hmm|PF08885.11 evalue:3e-52 score:176.8 best_domain_score:176.6 name:GSCFA;
77259 78053 CDS
ID metaerg.pl|06492
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera sp000813725;
genomedb_acc GCF_000813725.1;
genomedb_target db:genomedb|GCF_000813725.1|WP_039129779.1 2 231 evalue:1.9e-25 qcov:87.10 identity:34.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
78304 78228 tRNA
ID metaerg.pl|06493
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
name tRNA_Arg_ccg;
79583 78354 CDS
ID metaerg.pl|06494
allec_ids 2.8.1.7;
allgo_ids GO:0009058; GO:0030170; GO:0031071; GO:0006534;
allko_ids K04487; K11717; K01556;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798813.1 6 409 evalue:1.3e-217 qcov:98.80 identity:90.80;
kegg_pathway_id 00730; 00380;
kegg_pathway_name Thiamine metabolism; Tryptophan metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY0-1021; PWY0-1061;
metacyc_pathway_name L-alanine biosynthesis III;; superpathway of L-alanine biosynthesis;;
metacyc_pathway_type ALANINE-SYN;; ALANINE-SYN; Super-Pathways;;
pfam_acc PF00155; PF00266; PF01053; PF01041;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Cys/Met metabolism PLP-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; Aminotran_5; Cys_Met_Meta_PP; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1.5e-08 score:33.5 best_domain_score:24.0 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:1.1e-130 score:435.1 best_domain_score:434.9 name:Aminotran_5; db:Pfam-A.hmm|PF01053.20 evalue:4.5e-07 score:28.0 best_domain_score:27.1 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF01041.17 evalue:7.6e-06 score:24.7 best_domain_score:24.1 name:DegT_DnrJ_EryC1;
sprot_desc Probable cysteine desulfurase;
sprot_id sp|Q9PDA6|CSD_XYLFA;
sprot_target db:uniprot_sprot|sp|Q9PDA6|CSD_XYLFA 6 401 evalue:4.1e-114 qcov:96.80 identity:50.50;
tigrfam_acc TIGR01979;
tigrfam_desc cysteine desulfurase, SufS family;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name sufS;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01979 evalue:1.5e-158 score:527.0 best_domain_score:526.9 name:TIGR01979;
80160 79588 CDS
ID metaerg.pl|06495
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480710.1 1 190 evalue:6.0e-53 qcov:100.00 identity:63.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF04893;
pfam_desc Yip1 domain;
pfam_id Yip1;
pfam_target db:Pfam-A.hmm|PF04893.17 evalue:1.3e-14 score:53.5 best_domain_score:53.1 name:Yip1;
tm_num 5;
80160 79588 transmembrane_helix
ID metaerg.pl|06496
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology o79690-79758i79777-79845o79903-79971i79975-80043o80071-80139i;
80672 80166 CDS
ID metaerg.pl|06497
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798809.1 1 168 evalue:1.6e-54 qcov:100.00 identity:70.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
tm_num 4;
80672 80166 transmembrane_helix
ID metaerg.pl|06498
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i80256-80315o80373-80441i80460-80528o80571-80639i;
82001 80703 CDS
ID metaerg.pl|06499
allgo_ids GO:0016226; GO:0006979;
allko_ids K09015;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799275.1 2 431 evalue:3.8e-196 qcov:99.50 identity:79.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF01458;
pfam_desc Uncharacterized protein family (UPF0051);
pfam_id UPF0051;
pfam_target db:Pfam-A.hmm|PF01458.17 evalue:3.2e-60 score:202.8 best_domain_score:202.3 name:UPF0051;
sprot_desc FeS cluster assembly protein SufD;
sprot_id sp|P77689|SUFD_ECOLI;
sprot_target db:uniprot_sprot|sp|P77689|SUFD_ECOLI 32 420 evalue:5.8e-34 qcov:90.00 identity:29.90;
82759 81998 CDS
ID metaerg.pl|06500
allgo_ids GO:0005524; GO:0016887; GO:0005829; GO:0016226; GO:0009314;
allko_ids K09013; K06861;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480708.1 1 253 evalue:2.2e-127 qcov:100.00 identity:93.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:2.6e-19 score:69.3 best_domain_score:68.9 name:ABC_tran;
sprot_desc Probable ATP-dependent transporter SufC;
sprot_id sp|P77499|SUFC_ECOLI;
sprot_target db:uniprot_sprot|sp|P77499|SUFC_ECOLI 1 244 evalue:3.5e-79 qcov:96.40 identity:58.60;
tigrfam_acc TIGR01978;
tigrfam_desc FeS assembly ATPase SufC;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name sufC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01978 evalue:4.2e-105 score:349.7 best_domain_score:349.5 name:TIGR01978;
84301 82790 CDS
ID metaerg.pl|06501
allgo_ids GO:0016226;
allko_ids K09014;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469244.1 1 503 evalue:1.5e-284 qcov:100.00 identity:96.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF01458;
pfam_desc Uncharacterized protein family (UPF0051);
pfam_id UPF0051;
pfam_target db:Pfam-A.hmm|PF01458.17 evalue:4.5e-70 score:235.0 best_domain_score:234.7 name:UPF0051;
sprot_desc hypothetical protein;
sprot_id sp|Q55790|Y074_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55790|Y074_SYNY3 28 503 evalue:5.7e-190 qcov:94.60 identity:67.00;
tigrfam_acc TIGR01980;
tigrfam_desc FeS assembly protein SufB;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name sufB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01980 evalue:8.5e-188 score:623.7 best_domain_score:623.3 name:TIGR01980;
85366 84317 CDS
ID metaerg.pl|06502
allec_ids 2.8.1.7;
allgo_ids GO:0031071; GO:0051536; GO:0046872; GO:0030170; GO:0006520; GO:0009399;
allko_ids K04487;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799274.1 3 349 evalue:2.5e-161 qcov:99.40 identity:85.30;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY0-1021; PWY0-1061;
metacyc_pathway_name L-alanine biosynthesis III;; superpathway of L-alanine biosynthesis;;
metacyc_pathway_type ALANINE-SYN;; ALANINE-SYN; Super-Pathways;;
pfam_acc PF00266;
pfam_desc Aminotransferase class-V;
pfam_id Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:2.1e-36 score:124.9 best_domain_score:82.5 name:Aminotran_5;
sprot_desc Cysteine desulfurase;
sprot_id sp|Q01179|NIFS_RHOSH;
sprot_target db:uniprot_sprot|sp|Q01179|NIFS_RHOSH 5 335 evalue:1.5e-40 qcov:94.80 identity:35.80;
85849 85391 CDS
ID metaerg.pl|06503
allgo_ids GO:0051537; GO:0003700; GO:0003690; GO:0005506;
allko_ids K13643;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480706.1 1 152 evalue:6.5e-66 qcov:100.00 identity:86.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF02082;
pfam_desc Transcriptional regulator;
pfam_id Rrf2;
pfam_target db:Pfam-A.hmm|PF02082.20 evalue:2e-27 score:94.6 best_domain_score:94.0 name:Rrf2;
sprot_desc HTH-type transcriptional regulator IscR;
sprot_id sp|Q6LU63|ISCR_PHOPR;
sprot_target db:uniprot_sprot|sp|Q6LU63|ISCR_PHOPR 1 135 evalue:1.1e-24 qcov:88.80 identity:46.70;
tigrfam_acc TIGR00738;
tigrfam_desc Rrf2 family protein;
tigrfam_mainrole Unknown function;
tigrfam_name rrf2_super;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00738 evalue:2.4e-35 score:120.5 best_domain_score:120.3 name:TIGR00738;
86099 86758 CDS
ID metaerg.pl|06504
allgo_ids GO:0016787;
allko_ids K07018;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469241.1 1 219 evalue:1.7e-120 qcov:100.00 identity:94.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00561; PF12697; PF12146; PF02129; PF00326;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33; X-Pro dipeptidyl-peptidase (S15 family); Prolyl oligopeptidase family;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4; Peptidase_S15; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:2.9e-07 score:29.6 best_domain_score:28.4 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:3.1e-07 score:30.5 best_domain_score:29.4 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:2.9e-11 score:42.3 best_domain_score:35.1 name:Hydrolase_4; db:Pfam-A.hmm|PF02129.18 evalue:5.4e-09 score:35.3 best_domain_score:35.0 name:Peptidase_S15; db:Pfam-A.hmm|PF00326.21 evalue:2.9e-07 score:29.4 best_domain_score:16.1 name:Peptidase_S9;
sprot_desc hypothetical protein;
sprot_id sp|Q9ZD73|Y471_RICPR;
sprot_target db:uniprot_sprot|sp|Q9ZD73|Y471_RICPR 1 193 evalue:2.5e-57 qcov:88.10 identity:54.80;
86828 87412 CDS
ID metaerg.pl|06505
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799273.1 1 192 evalue:4.4e-75 qcov:99.00 identity:78.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF13305; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_33; TetR_N;
pfam_target db:Pfam-A.hmm|PF13305.6 evalue:8.1e-12 score:45.1 best_domain_score:44.1 name:TetR_C_33; db:Pfam-A.hmm|PF00440.23 evalue:3.5e-05 score:22.7 best_domain_score:21.9 name:TetR_N;
87511 88176 CDS
ID metaerg.pl|06506
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798796.1 1 221 evalue:4.2e-82 qcov:100.00 identity:79.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF04012;
pfam_desc PspA/IM30 family;
pfam_id PspA_IM30;
pfam_target db:Pfam-A.hmm|PF04012.12 evalue:7.7e-11 score:41.2 best_domain_score:41.1 name:PspA_IM30;
88207 88482 CDS
ID metaerg.pl|06507
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798794.1 1 91 evalue:1.1e-31 qcov:100.00 identity:80.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
tm_num 2;
88207 88482 transmembrane_helix
ID metaerg.pl|06508
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i88243-88302o88330-88383i;
88627 89355 CDS
ID metaerg.pl|06509
allgo_ids GO:0004222; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798792.1 1 242 evalue:2.6e-101 qcov:100.00 identity:80.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:1.6e-16 score:59.9 best_domain_score:59.3 name:Peptidase_M48;
sp YES;
tm_num 1;
88627 88683 lipoprotein_signal_peptide
ID metaerg.pl|06510
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
88627 89355 transmembrane_helix
ID metaerg.pl|06511
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i88645-88713o;
89369 89698 CDS
ID metaerg.pl|06512
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480703.1 1 109 evalue:2.0e-45 qcov:100.00 identity:89.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00893;
pfam_desc Small Multidrug Resistance protein;
pfam_id Multi_Drug_Res;
pfam_target db:Pfam-A.hmm|PF00893.19 evalue:8.4e-29 score:99.3 best_domain_score:98.9 name:Multi_Drug_Res;
sprot_desc Quaternary ammonium compound-resistance protein QacE;
sprot_id sp|P0AGC9|QACE_ECOLX;
sprot_target db:uniprot_sprot|sp|P0AGC9|QACE_ECOLX 3 109 evalue:3.3e-26 qcov:98.20 identity:52.30;
tm_num 3;
89369 89698 transmembrane_helix
ID metaerg.pl|06513
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology o89450-89518i89537-89605o89618-89677i;
89699 90301 CDS
ID metaerg.pl|06514
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798788.1 1 200 evalue:1.3e-85 qcov:100.00 identity:85.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF02588;
pfam_desc Uncharacterised 5xTM membrane BCR, YitT family COG1284;
pfam_id YitT_membrane;
pfam_target db:Pfam-A.hmm|PF02588.15 evalue:7.3e-25 score:86.8 best_domain_score:86.5 name:YitT_membrane;
tm_num 6;
89699 90301 transmembrane_helix
ID metaerg.pl|06515
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i89735-89803o89831-89899i89918-89986o90014-90073i90134-90202o90215-90268i;
90376 92196 CDS
ID metaerg.pl|06516
allgo_ids GO:0003924; GO:0005525; GO:0005829; GO:1990904; GO:0006412;
allko_ids K00860; K00956; K03018; K00955; K06207;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480699.1 1 606 evalue:0.0e+00 qcov:100.00 identity:95.90;
kegg_pathway_id 00450; 00920; 00230; 03020;
kegg_pathway_name Selenoamino acid metabolism; Sulfur metabolism; Purine metabolism; RNA polymerase;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF00679; PF00009; PF03144; PF01926;
pfam_desc Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; 50S ribosome-binding GTPase;
pfam_id EFG_C; GTP_EFTU; GTP_EFTU_D2; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00679.24 evalue:3.6e-21 score:74.3 best_domain_score:73.3 name:EFG_C; db:Pfam-A.hmm|PF00009.27 evalue:2.3e-56 score:189.7 best_domain_score:188.0 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:2.8e-12 score:46.1 best_domain_score:44.7 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF01926.23 evalue:8e-08 score:31.6 best_domain_score:27.3 name:MMR_HSR1;
sprot_desc GTP-binding protein TypA/BipA homolog;
sprot_id sp|O25225|TYPA_HELPY;
sprot_target db:uniprot_sprot|sp|O25225|TYPA_HELPY 3 603 evalue:1.3e-188 qcov:99.20 identity:54.30;
tigrfam_acc TIGR00231; TIGR01394;
tigrfam_desc small GTP-binding protein domain; GTP-binding protein TypA/BipA;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; TypA_BipA;
tigrfam_sub1role General; Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:6.7e-26 score:90.2 best_domain_score:85.4 name:TIGR00231; db:TIGRFAMs.hmm|TIGR01394 evalue:1.4e-278 score:924.3 best_domain_score:924.1 name:TIGR01394;
93770 92496 CDS
ID metaerg.pl|06517
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798680.1 10 349 evalue:6.7e-121 qcov:80.20 identity:65.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
pfam_acc PF01052;
pfam_desc Type III flagellar switch regulator (C-ring) FliN C-term;
pfam_id FliMN_C;
pfam_target db:Pfam-A.hmm|PF01052.20 evalue:2.5e-12 score:45.8 best_domain_score:45.0 name:FliMN_C;
94433 93816 CDS
ID metaerg.pl|06518
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657695.1 1 204 evalue:6.2e-88 qcov:99.50 identity:75.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
sp YES;
93816 93878 lipoprotein_signal_peptide
ID metaerg.pl|06519
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
94670 96184 CDS
ID metaerg.pl|06520
allec_ids 6.3.5.-;
allgo_ids GO:0016874; GO:0005524; GO:0050567; GO:0006412;
allko_ids K02434;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470750.1 1 504 evalue:5.0e-272 qcov:100.00 identity:93.50;
kegg_pathway_id 00252; 00251;
kegg_pathway_name Alanine and aspartate metabolism; Glutamate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
metacyc_pathway_id PWY490-4;
metacyc_pathway_name L-asparagine biosynthesis III (tRNA-dependent);;
metacyc_pathway_type ASPARAGINE-SYN; Aminoacyl-tRNAs-Charging;;
pfam_acc PF02934; PF02637;
pfam_desc GatB/GatE catalytic domain; GatB domain;
pfam_id GatB_N; GatB_Yqey;
pfam_target db:Pfam-A.hmm|PF02934.15 evalue:6.6e-109 score:362.7 best_domain_score:362.4 name:GatB_N; db:Pfam-A.hmm|PF02637.18 evalue:1.2e-48 score:164.0 best_domain_score:163.6 name:GatB_Yqey;
sprot_desc Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B;
sprot_id sp|A8LI95|GATB_DINSH;
sprot_target db:uniprot_sprot|sp|A8LI95|GATB_DINSH 1 502 evalue:1.5e-254 qcov:99.60 identity:86.30;
tigrfam_acc TIGR00133;
tigrfam_desc aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name gatB;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00133 evalue:7.9e-155 score:515.2 best_domain_score:514.9 name:TIGR00133;
96251 97459 CDS
ID metaerg.pl|06521
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
sp YES;
tm_num 1;
96251 96331 signal_peptide
ID metaerg.pl|06522
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
96251 97459 transmembrane_helix
ID metaerg.pl|06523
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.403032; 0.00679272; 190.052; 0.442421; 190.905;
topology i96284-96352o;
>Feature NODE_41_length_96670_cov_8.44477
2 1261 CDS
ID metaerg.pl|06524
allec_ids 4.2.1.20;
allgo_ids GO:0004834;
allko_ids K01694; K01817; K06001; K01695; K01696;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035994273.1 7 418 evalue:6.7e-222 qcov:98.30 identity:93.00;
kegg_pathway_id 00400; 02020;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; TRPSYN-PWY;
metacyc_pathway_name superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; L-tryptophan biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; TRYPTOPHAN-BIOSYNTHESIS;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:2.6e-46 score:157.6 best_domain_score:157.3 name:PALP;
sprot_desc Tryptophan synthase beta chain 2;
sprot_id sp|Q8YQM6|TRPB2_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YQM6|TRPB2_NOSS1 7 415 evalue:2.7e-201 qcov:97.60 identity:84.10;
tigrfam_acc TIGR00263;
tigrfam_desc tryptophan synthase, beta subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpB;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00263 evalue:5.7e-185 score:614.0 best_domain_score:613.9 name:TIGR00263;
1266 1739 CDS
ID metaerg.pl|06525
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chroococcidiopsidaceae;g__Chroogloeocystis;s__Chroogloeocystis sp002964865;
genomedb_acc GCF_002964865.1;
genomedb_target db:genomedb|GCF_002964865.1|WP_105217818.1 10 154 evalue:1.1e-55 qcov:92.40 identity:70.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF01724;
pfam_desc Domain of unknown function DUF29;
pfam_id DUF29;
pfam_target db:Pfam-A.hmm|PF01724.16 evalue:6.5e-45 score:152.0 best_domain_score:151.8 name:DUF29;
1798 2424 CDS
ID metaerg.pl|06526
allec_ids 3.1.13.5;
allgo_ids GO:0003676; GO:0006139; GO:0008408; GO:0005737; GO:0000166; GO:0033890; GO:0042780;
allko_ids K02335; K03684;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106921366.1 1 208 evalue:1.4e-95 qcov:100.00 identity:84.10;
kegg_pathway_id 03440; 03420; 03410; 03030; 00240; 00230;
kegg_pathway_name Homologous recombination; Nucleotide excision repair; Base excision repair; DNA replication; Pyrimidine metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWY0-1479;
metacyc_pathway_name tRNA processing;;
metacyc_pathway_type Nucleic-Acid-Processing;;
pfam_acc PF01612; PF13482;
pfam_desc 3'-5' exonuclease; RNase_H superfamily;
pfam_id DNA_pol_A_exo1; RNase_H_2;
pfam_target db:Pfam-A.hmm|PF01612.20 evalue:5.4e-38 score:129.7 best_domain_score:129.4 name:DNA_pol_A_exo1; db:Pfam-A.hmm|PF13482.6 evalue:4.9e-05 score:22.6 best_domain_score:20.2 name:RNase_H_2;
sprot_desc Ribonuclease D;
sprot_id sp|Q6AJF4|RND_DESPS;
sprot_target db:uniprot_sprot|sp|Q6AJF4|RND_DESPS 25 171 evalue:5.5e-06 qcov:70.70 identity:28.60;
3353 2475 CDS
ID metaerg.pl|06527
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
sp YES;
2475 2552 signal_peptide
ID metaerg.pl|06528
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
3874 3437 CDS
ID metaerg.pl|06529
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus variabilis;
genomedb_acc GCF_000204075.1;
genomedb_target db:genomedb|GCF_000204075.1|WP_011318439.1 19 140 evalue:3.4e-08 qcov:84.10 identity:31.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
4616 4239 CDS
ID metaerg.pl|06530
allgo_ids GO:0000160; GO:0005829; GO:0032993; GO:0001216; GO:0003700; GO:0000156; GO:0000976;
allko_ids K07652; K07639; K08475; K01120; K07673; K07641; K07646; K03407; K07682; K07654; K07651; K07648; K07679; K07711; K07778; K11354; K11640; K02484; K07642; K11711; K11231; K01937; K08282; K07677; K07645; K07708; K07710; K07716; K02489; K10916; K08479; K03388; K02668; K10715; K07678; K11527; K07636; K07653; K02480; K02482; K07644; K06379; K10681; K07676; K07675; K07647; K10125; K11357; K04757; K12767; K02486; K11383; K07666;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Elainellales;f__Elainellaceae;g__Leptolyngbya_A;s__Leptolyngbya_A ohadii;
genomedb_acc GCF_002215035.1;
genomedb_target db:genomedb|GCF_002215035.1|WP_088889604.1 1 124 evalue:7.2e-39 qcov:99.20 identity:64.50;
kegg_pathway_id 00230; 05111; 00790; 00240; 02020; 04011; 03090;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Folate biosynthesis; Pyrimidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:2.4e-22 score:78.4 best_domain_score:78.3 name:Response_reg;
sprot_desc Transcriptional regulatory protein QseB;
sprot_id sp|P45337|QSEB_HAEIN;
sprot_target db:uniprot_sprot|sp|P45337|QSEB_HAEIN 4 121 evalue:2.4e-09 qcov:94.40 identity:28.10;
5067 4678 CDS
ID metaerg.pl|06531
allgo_ids GO:0006355;
allko_ids K02482; K08801; K07636; K13587; K01769; K13040; K04486; K07704;
kegg_pathway_id 02020; 00340; 00230;
kegg_pathway_name Two-component system - General; Histidine metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00989; PF13188;
pfam_desc PAS fold; PAS domain;
pfam_id PAS; PAS_8;
pfam_target db:Pfam-A.hmm|PF00989.25 evalue:4.5e-05 score:22.7 best_domain_score:22.0 name:PAS; db:Pfam-A.hmm|PF13188.7 evalue:2.4e-06 score:26.7 best_domain_score:26.2 name:PAS_8;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:6.3e-14 score:51.3 best_domain_score:49.7 name:TIGR00229;
5839 5174 CDS
ID metaerg.pl|06532
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF08239;
pfam_desc Bacterial SH3 domain;
pfam_id SH3_3;
pfam_target db:Pfam-A.hmm|PF08239.11 evalue:9.8e-13 score:47.4 best_domain_score:46.4 name:SH3_3;
sp YES;
5174 5227 lipoprotein_signal_peptide
ID metaerg.pl|06533
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
6135 7535 CDS
ID metaerg.pl|06534
allec_ids 1.14.15.17;
allgo_ids GO:0010277; GO:0055114; GO:0009507; GO:0009941; GO:0009706; GO:0009534; GO:0009535; GO:0051537; GO:0051536; GO:0046872; GO:0032441; GO:0008219; GO:0015996; GO:0009816; GO:0009908; GO:0010154;
allko_ids K00517; K13071;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV02253.1 19 464 evalue:5.2e-215 qcov:95.70 identity:79.00;
kegg_pathway_id 00940; 00361; 00903; 00626;
kegg_pathway_name Phenylpropanoid biosynthesis; gamma-Hexachlorocyclohexane degradation; Limonene and pinene degradation; Naphthalene and anthracene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF08417; PF00355;
pfam_desc Pheophorbide a oxygenase; Rieske [2Fe-2S] domain;
pfam_id PaO; Rieske;
pfam_target db:Pfam-A.hmm|PF08417.12 evalue:4.2e-24 score:83.7 best_domain_score:82.8 name:PaO; db:Pfam-A.hmm|PF00355.26 evalue:8.8e-19 score:66.5 best_domain_score:65.8 name:Rieske;
sprot_desc Pheophorbide a oxygenase, chloroplastic;
sprot_id sp|Q9FYC2|PAO_ARATH;
sprot_target db:uniprot_sprot|sp|Q9FYC2|PAO_ARATH 29 454 evalue:1.8e-65 qcov:91.40 identity:36.40;
tm_num 2;
6135 7535 transmembrane_helix
ID metaerg.pl|06535
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i7341-7400o7410-7478i;
7628 8842 CDS
ID metaerg.pl|06536
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO38378.1 1 404 evalue:6.0e-103 qcov:100.00 identity:48.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
8842 9693 CDS
ID metaerg.pl|06537
allgo_ids GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO38384.1 6 274 evalue:1.8e-106 qcov:95.10 identity:72.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00924;
pfam_desc Mechanosensitive ion channel;
pfam_id MS_channel;
pfam_target db:Pfam-A.hmm|PF00924.18 evalue:1.3e-43 score:148.2 best_domain_score:142.0 name:MS_channel;
tm_num 3;
8842 9693 transmembrane_helix
ID metaerg.pl|06538
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology o8917-8985i9052-9111o9154-9222i;
9683 10492 CDS
ID metaerg.pl|06539
allec_ids 2.1.1.-;
allgo_ids GO:0008168;
allko_ids K00599; K03183;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__CCP5;s__CCP5 sp003017785;
genomedb_acc GCF_003017785.1;
genomedb_target db:genomedb|GCF_003017785.1|WP_106880757.1 57 267 evalue:3.2e-84 qcov:78.40 identity:71.10;
kegg_pathway_id 00626; 00450; 00380; 00340; 00150; 00130; 00350;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism; Ubiquinone biosynthesis; Tyrosine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWY-6154; PWY-6424; UBISYN-PWY; PWY-6142; PWY-5856; METH-ACETATE-PWY; PWY-6303; PWY-5857; PWY-6151; PWY-5209; PWY-5855; PWY-6292; PWY-5479; PWY-5987; PWY-6427; PWY-6395; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-6519; PWY-5773; PWY-5328; METHIONINE-DEG1-PWY; PWY-5116; PWY-1581; CO2FORM-PWY; PWY-6153; ALL-CHORISMATE-PWY; PWY-3542; PWY-4021; PWY-5041; CODH-PWY; PWY-6575; PWY-6442; PWY-6477; PWY-5467; PWY-1422; PWY-5729; PWY-6113; PWY-5305; PWYG-321; PWY-5864; PWY-5975; PWY-5876; PWY-1061;
metacyc_pathway_name autoinducer AI-2 biosynthesis II (Vibrio);; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; methanogenesis from acetate;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; S-adenosyl-L-methionine cycle I;; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; xanthohumol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; autoinducer AI-2 biosynthesis I;; superpathway of chorismate metabolism;; choline biosynthesis II;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; gibberellin inactivation II (methylation);; gramine biosynthesis;; vitamin E biosynthesis (tocopherols);; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; magnoflorine biosynthesis;; homogalacturonan biosynthesis;;
metacyc_pathway_type Autoinducer-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; Autoinducer-Biosynthesis;; Super-Pathways;; Choline-Biosynthesis;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Autotrophic-CO2-Fixation;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;;
pfam_acc PF08241; PF08242; PF13489; PF13649; PF13847; PF05175; PF01209;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain; ubiE/COQ5 methyltransferase family;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; MTS; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:1.4e-19 score:69.7 best_domain_score:69.1 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:9.5e-10 score:38.4 best_domain_score:37.8 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:1.4e-08 score:34.0 best_domain_score:33.6 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.9e-21 score:75.8 best_domain_score:75.2 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.9e-16 score:59.4 best_domain_score:59.1 name:Methyltransf_31; db:Pfam-A.hmm|PF05175.14 evalue:2.3e-05 score:23.2 best_domain_score:22.6 name:MTS; db:Pfam-A.hmm|PF01209.18 evalue:1.1e-12 score:47.1 best_domain_score:46.0 name:Ubie_methyltran;
sprot_desc Uncharacterized methyltransferase sll0829;
sprot_id sp|Q55423|Y829_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55423|Y829_SYNY3 57 266 evalue:5.5e-59 qcov:78.10 identity:53.30;
11106 10651 CDS
ID metaerg.pl|06540
allgo_ids GO:0004518; GO:0003676;
allko_ids K07460;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106920113.1 5 151 evalue:8.4e-58 qcov:97.40 identity:76.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF02021;
pfam_desc Uncharacterised protein family UPF0102;
pfam_id UPF0102;
pfam_target db:Pfam-A.hmm|PF02021.17 evalue:1.1e-26 score:92.1 best_domain_score:91.7 name:UPF0102;
sprot_desc hypothetical protein;
sprot_id sp|Q118B0|Y733_TRIEI;
sprot_target db:uniprot_sprot|sp|Q118B0|Y733_TRIEI 7 146 evalue:4.0e-30 qcov:92.70 identity:45.10;
tigrfam_acc TIGR00252;
tigrfam_desc TIGR00252 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00252;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00252 evalue:2.2e-29 score:101.1 best_domain_score:100.5 name:TIGR00252;
11269 12654 CDS
ID metaerg.pl|06541
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0005345;
allko_ids K06901;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035993715.1 8 461 evalue:9.3e-209 qcov:98.50 identity:85.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00860;
pfam_desc Permease family;
pfam_id Xan_ur_permease;
pfam_target db:Pfam-A.hmm|PF00860.20 evalue:2.5e-42 score:144.2 best_domain_score:143.9 name:Xan_ur_permease;
sprot_desc Putative permease MJ0326;
sprot_id sp|Q57772|Y326_METJA;
sprot_target db:uniprot_sprot|sp|Q57772|Y326_METJA 21 461 evalue:1.8e-105 qcov:95.70 identity:52.60;
tm_num 12;
11269 12654 transmembrane_helix
ID metaerg.pl|06542
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i11383-11451o11479-11547i11560-11628o11638-11706i11740-11808o11851-11904i11917-11985o12043-12111i12313-12381o12391-12450i12484-12552o12595-12648i;
12813 13286 CDS
ID metaerg.pl|06543
allec_ids 3.6.1.-;
allgo_ids GO:0002161;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035985390.1 1 155 evalue:8.7e-66 qcov:98.70 identity:80.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id ALL-CHORISMATE-PWY; FOLSYN-PWY; PWY-6383; PWY-6147; PWY-6502; PWY-5354; PWY-6404;
metacyc_pathway_name superpathway of chorismate metabolism;; superpathway of tetrahydrofolate biosynthesis and salvage;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; oxidized GTP and dGTP detoxification;; ; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Super-Pathways;; Folate-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; 6-HM-Dihydropterin-PP-Biosynthesis;; Detoxification; Metabolic-Clusters;; ; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF04073;
pfam_desc Aminoacyl-tRNA editing domain;
pfam_id tRNA_edit;
pfam_target db:Pfam-A.hmm|PF04073.15 evalue:5.7e-25 score:87.0 best_domain_score:86.8 name:tRNA_edit;
tigrfam_acc TIGR00011;
tigrfam_desc Cys-tRNA(Pro) deacylase;
tigrfam_mainrole Protein synthesis;
tigrfam_name YbaK_EbsC;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00011 evalue:1.3e-50 score:170.3 best_domain_score:170.1 name:TIGR00011;
14731 13352 CDS
ID metaerg.pl|06544
allko_ids K00368; K15864;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Hoyosella;s__Hoyosella altamirensis;
genomedb_acc GCF_001653095.1;
genomedb_target db:genomedb|GCF_001653095.1|WP_064438439.1 17 456 evalue:3.2e-124 qcov:95.90 identity:52.90;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
sp YES;
13352 13408 lipoprotein_signal_peptide
ID metaerg.pl|06545
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
15350 16615 CDS
ID metaerg.pl|06546
allgo_ids GO:0009267; GO:0016020; GO:0005887; GO:0031669; GO:0015031;
allko_ids K06200;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__Truepera;s__Truepera radiovictrix;
genomedb_acc GCF_000092425.1;
genomedb_target db:genomedb|GCF_000092425.1|WP_013177516.1 1 411 evalue:6.6e-145 qcov:97.60 identity:68.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF02554; PF13722;
pfam_desc Carbon starvation protein CstA; 5TM C-terminal transporter carbon starvation CstA;
pfam_id CstA; CstA_5TM;
pfam_target db:Pfam-A.hmm|PF02554.14 evalue:1e-55 score:188.4 best_domain_score:188.4 name:CstA; db:Pfam-A.hmm|PF13722.6 evalue:5.9e-33 score:112.9 best_domain_score:112.9 name:CstA_5TM;
sprot_desc Peptide transporter CstA;
sprot_id sp|O67304|CSTA_AQUAE;
sprot_target db:uniprot_sprot|sp|O67304|CSTA_AQUAE 3 410 evalue:1.3e-83 qcov:96.90 identity:47.30;
tm_num 12;
15350 16615 transmembrane_helix
ID metaerg.pl|06547
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i15353-15421o15434-15493i15506-15565o15593-15661i15695-15763o15791-15859i15917-15985o16076-16144i16250-16318o16328-16387i16406-16474o16502-16570i;
16656 16928 CDS
ID metaerg.pl|06548
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__Pseudohongiella;s__Pseudohongiella acticola;
genomedb_acc GCF_001758195.1;
genomedb_target db:genomedb|GCF_001758195.1|WP_083264551.1 2 90 evalue:4.3e-25 qcov:98.90 identity:60.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
16940 17950 CDS
ID metaerg.pl|06549
allec_ids 7.3.2.7; 3.6.1.-;
allgo_ids GO:0005524; GO:0016887; GO:0015446; GO:0042802; GO:0046685;
allko_ids K01551;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000053.1_19 15 334 evalue:3.3e-94 qcov:95.20 identity:53.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWY-5354; PWY-6404; FOLSYN-PWY; PWY-6383; ALL-CHORISMATE-PWY; PWY-6502; PWY-6147;
metacyc_pathway_name ; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of chorismate metabolism;; oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;;
metacyc_pathway_type ; Cell-Wall-Biosynthesis; Super-Pathways;; Folate-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Super-Pathways;; Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;;
pfam_acc PF13614; PF02374; PF01656;
pfam_desc AAA domain; Anion-transporting ATPase; CobQ/CobB/MinD/ParA nucleotide binding domain;
pfam_id AAA_31; ArsA_ATPase; CbiA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:3e-11 score:42.8 best_domain_score:42.1 name:AAA_31; db:Pfam-A.hmm|PF02374.15 evalue:3e-72 score:242.6 best_domain_score:242.4 name:ArsA_ATPase; db:Pfam-A.hmm|PF01656.23 evalue:5e-10 score:38.8 best_domain_score:37.8 name:CbiA;
sprot_desc Putative arsenical pump-driving ATPase;
sprot_id sp|Q58542|ARSA_METJA;
sprot_target db:uniprot_sprot|sp|Q58542|ARSA_METJA 22 334 evalue:5.5e-48 qcov:93.20 identity:36.40;
tigrfam_acc TIGR00345;
tigrfam_desc transport-energizing ATPase, TRC40/GET3/ArsA family;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name GET3_arsA_TRC40;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00345 evalue:7.7e-80 score:267.7 best_domain_score:267.5 name:TIGR00345;
18160 18372 CDS
ID metaerg.pl|06550
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
tm_num 2;
18160 18372 transmembrane_helix
ID metaerg.pl|06551
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology o18202-18261i18298-18366o;
18592 18987 CDS
ID metaerg.pl|06552
allgo_ids GO:0000160; GO:0005829; GO:0032993; GO:0001216; GO:0003700; GO:0000156; GO:0000976; GO:0006355;
allko_ids K01937; K08282; K10909; K07704; K07677; K07645; K07708; K11231; K07642; K11711; K11640; K11356; K02484; K07711; K07768; K07778; K11354; K07718; K07651; K07648; K07679; K02478; K07637; K03407; K07682; K07654; K07652; K07639; K08475; K01120; K07673; K07641; K07646; K10125; K11357; K04757; K07769; K12767; K13761; K02486; K11383; K07675; K07717; K07647; K06379; K07676; K10681; K07644; K07709; K07636; K07653; K02480; K02482; K10715; K07678; K11527; K10916; K08479; K03388; K02668; K01768; K07710; K07716; K02489; K07668;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106920500.1 1 131 evalue:1.1e-48 qcov:100.00 identity:77.10;
kegg_pathway_id 03090; 02020; 04011; 00240; 05111; 00230; 00790;
kegg_pathway_name Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:5.5e-28 score:96.6 best_domain_score:96.4 name:Response_reg;
sprot_desc Transcriptional regulatory protein WalR;
sprot_id sp|P37478|WALR_BACSU;
sprot_target db:uniprot_sprot|sp|P37478|WALR_BACSU 6 119 evalue:5.3e-15 qcov:87.00 identity:41.40;
23116 19046 CDS
ID metaerg.pl|06553
allgo_ids GO:0005515;
allko_ids K07718; K07698; K07651; K07648; K07679; K02478; K13533; K11328; K07711; K00873; K08884; K07768; K11633; K02575; K07778; K07683; K11354; K07652; K07639; K08475; K04093; K07673; K01120; K13598; K07641; K07646; K07637; K03407; K07682; K07649; K00936; K07777; K07654; K01090; K02491; K13490; K11231; K07643; K01937; K08282; K10909; K07704; K07708; K07677; K07645; K04486; K11640; K11356; K00760; K02484; K07642; K11711; K10715; K07678; K07701; K11527; K02030; K13587; K07636; K07638; K07653; K02480; K08801; K02482; K14489; K07656; K01768; K07640; K07710; K11614; K07716; K02489; K07697; K10916; K07674; K08479; K03388; K02668; K07675; K07717; K11637; K13040; K10942; K07680; K07647; K11629; K10125; K02342; K02476; K11357; K11617; K04757; K11520; K14509; K07769; K12767; K13761; K11383; K02486; K07644; K07709; K13532; K06379; K10681; K07676; K07650; K04518; K01769;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017298385.1 1 1355 evalue:0.0e+00 qcov:99.90 identity:70.90;
kegg_pathway_id 00400; 05111; 00230; 00240; 03030; 00010; 00710; 00983; 00790; 00340; 04011; 02020; 03090; 00620;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; DNA replication; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Drug metabolism - other enzymes; Folate biosynthesis; Histidine metabolism; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF01590; PF13185; PF13492; PF02518; PF00512; PF00989; PF08448; PF12860; PF13188; PF13426; PF00072;
pfam_desc GAF domain; GAF domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id GAF; GAF_2; GAF_3; HATPase_c; HisKA; PAS; PAS_4; PAS_7; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:3.3e-30 score:104.7 best_domain_score:42.3 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:8.5e-25 score:86.9 best_domain_score:32.2 name:GAF_2; db:Pfam-A.hmm|PF13492.6 evalue:4.7e-16 score:58.5 best_domain_score:25.5 name:GAF_3; db:Pfam-A.hmm|PF02518.26 evalue:2.9e-28 score:97.8 best_domain_score:96.8 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.4e-13 score:49.9 best_domain_score:49.8 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:9.1e-28 score:95.8 best_domain_score:41.1 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:1.3e-25 score:89.0 best_domain_score:46.6 name:PAS_4; db:Pfam-A.hmm|PF12860.7 evalue:4.6e-18 score:64.7 best_domain_score:23.3 name:PAS_7; db:Pfam-A.hmm|PF13188.7 evalue:1.1e-23 score:81.9 best_domain_score:30.9 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:1.3e-22 score:79.2 best_domain_score:39.7 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:7.8e-24 score:83.2 best_domain_score:81.7 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.5e-44 score:150.3 best_domain_score:69.5 name:TIGR00229;
24047 23250 CDS
ID metaerg.pl|06554
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035985491.1 1 265 evalue:5.7e-118 qcov:100.00 identity:78.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
24319 26280 CDS
ID metaerg.pl|06555
allgo_ids GO:0016021; GO:0055085; GO:0008324; GO:0006813;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO38832.1 36 653 evalue:6.2e-299 qcov:94.60 identity:87.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF03600; PF00939; PF02080;
pfam_desc Citrate transporter; Sodium:sulfate symporter transmembrane region; TrkA-C domain;
pfam_id CitMHS; Na_sulph_symp; TrkA_C;
pfam_target db:Pfam-A.hmm|PF03600.16 evalue:4.4e-50 score:169.8 best_domain_score:169.8 name:CitMHS; db:Pfam-A.hmm|PF00939.19 evalue:4.2e-08 score:31.9 best_domain_score:31.4 name:Na_sulph_symp; db:Pfam-A.hmm|PF02080.21 evalue:6.9e-21 score:73.1 best_domain_score:36.2 name:TrkA_C;
sprot_desc Putative sulfur deprivation response regulator;
sprot_id sp|Q39593|SAC1_CHLRE;
sprot_target db:uniprot_sprot|sp|Q39593|SAC1_CHLRE 90 651 evalue:5.8e-102 qcov:86.10 identity:40.20;
tm_num 12;
24319 26280 transmembrane_helix
ID metaerg.pl|06556
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i24448-24516o24559-24627i24664-24732o24790-24858i24919-24987o25030-25098i25705-25758o25768-25836i25855-25923o25966-26034i26071-26139o26203-26271i;
26427 26888 CDS
ID metaerg.pl|06557
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_052049557.1 9 153 evalue:7.2e-57 qcov:94.80 identity:76.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
tm_num 3;
26427 26888 transmembrane_helix
ID metaerg.pl|06558
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i26487-26555o26613-26672i26733-26801o;
27043 27909 CDS
ID metaerg.pl|06559
allec_ids 2.5.1.145; 2.4.99.-;
allgo_ids GO:0016020; GO:0016757; GO:0042158; GO:0005887; GO:0008961;
allko_ids K13292;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106869843.1 16 288 evalue:1.9e-135 qcov:94.80 identity:85.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWY-6467;
metacyc_pathway_name Kdo transfer to lipid IVA III (Chlamydia);;
metacyc_pathway_type KDO-Lipid-IV-Transfer; Super-Pathways;;
pfam_acc PF01790;
pfam_desc Prolipoprotein diacylglyceryl transferase;
pfam_id LGT;
pfam_target db:Pfam-A.hmm|PF01790.18 evalue:4.6e-78 score:261.0 best_domain_score:260.8 name:LGT;
sprot_desc Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase;
sprot_id sp|Q3MBP7|LGT_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MBP7|LGT_ANAVT 19 285 evalue:3.2e-105 qcov:92.70 identity:67.00;
tigrfam_acc TIGR00544;
tigrfam_desc prolipoprotein diacylglyceryl transferase;
tigrfam_mainrole Protein fate;
tigrfam_name lgt;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00544 evalue:2.1e-80 score:269.3 best_domain_score:268.9 name:TIGR00544;
tm_num 7;
27043 27909 transmembrane_helix
ID metaerg.pl|06560
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology o27142-27210i27247-27300o27343-27411i27430-27498o27616-27684i27709-27762o27805-27873i;
28349 28053 CDS
ID metaerg.pl|06561
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO33891.1 1 97 evalue:2.3e-40 qcov:99.00 identity:82.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
28419 29270 CDS
ID metaerg.pl|06562
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016887;
allko_ids K02006; K02052; K02003; K01997; K05847; K02010; K02017; K01996; K02071; K06861; K02045; K11072; K10112; K10111; K01998; K02065; K01995; K02049; K05816; K09687; K02023; K01990; K11962; K02000;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106868221.1 1 283 evalue:4.8e-147 qcov:100.00 identity:90.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6171; PWY-6135; PWY-6166; PWY-6188;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:6.5e-12 score:45.1 best_domain_score:31.9 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.9e-34 score:117.8 best_domain_score:117.0 name:ABC_tran;
sprot_desc Linearmycin resistance ATP-binding protein LnrL;
sprot_id sp|P94440|LNRL_BACSU;
sprot_target db:uniprot_sprot|sp|P94440|LNRL_BACSU 8 227 evalue:8.7e-55 qcov:77.70 identity:45.00;
29324 29887 CDS
ID metaerg.pl|06563
allgo_ids GO:0051304;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073610353.1 1 187 evalue:4.3e-72 qcov:100.00 identity:75.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF04079;
pfam_desc Segregation and condensation complex subunit ScpB;
pfam_id SMC_ScpB;
pfam_target db:Pfam-A.hmm|PF04079.16 evalue:3.7e-37 score:126.6 best_domain_score:126.4 name:SMC_ScpB;
tigrfam_acc TIGR00281;
tigrfam_desc segregation and condensation protein B;
tigrfam_mainrole DNA metabolism;
tigrfam_name TIGR00281;
tigrfam_sub1role Chromosome-associated proteins;
tigrfam_target db:TIGRFAMs.hmm|TIGR00281 evalue:4.9e-41 score:139.5 best_domain_score:139.3 name:TIGR00281;
30036 30401 CDS
ID metaerg.pl|06564
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV08618.1 1 121 evalue:3.0e-50 qcov:100.00 identity:86.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF05542;
pfam_desc Protein of unknown function (DUF760);
pfam_id DUF760;
pfam_target db:Pfam-A.hmm|PF05542.11 evalue:1.5e-25 score:88.5 best_domain_score:88.3 name:DUF760;
30603 31838 CDS
ID metaerg.pl|06565
allec_ids 2.6.1.83;
allgo_ids GO:0009058; GO:0030170; GO:0010285; GO:0033362;
allko_ids K00825; K10206;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106920083.1 1 410 evalue:5.4e-224 qcov:99.80 identity:91.00;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWY-724; PWY-5097;
metacyc_pathway_name superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-lysine biosynthesis VI;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:6e-33 score:113.7 best_domain_score:112.2 name:Aminotran_1_2;
sprot_desc LL-diaminopimelate aminotransferase;
sprot_id sp|B0JUM0|DAPAT_MICAN;
sprot_target db:uniprot_sprot|sp|B0JUM0|DAPAT_MICAN 1 411 evalue:3.5e-206 qcov:100.00 identity:83.70;
tigrfam_acc TIGR03542;
tigrfam_desc LL-diaminopimelate aminotransferase;
tigrfam_name DAPAT_plant;
tigrfam_target db:TIGRFAMs.hmm|TIGR03542 evalue:8.6e-185 score:613.5 best_domain_score:613.3 name:TIGR03542;
32093 32857 CDS
ID metaerg.pl|06566
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Hydrogenophilaceae;g__Thiobacillus;s__Thiobacillus sp001899305;
genomedb_acc GCA_001899305.1;
genomedb_target db:genomedb|GCA_001899305.1|OJY55806.1 1 254 evalue:1.1e-102 qcov:100.00 identity:73.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00563;
pfam_desc EAL domain;
pfam_id EAL;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:5.1e-50 score:169.4 best_domain_score:169.1 name:EAL;
33535 32870 CDS
ID metaerg.pl|06567
allgo_ids GO:0003824; GO:0050662;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO34891.1 1 221 evalue:1.1e-98 qcov:100.00 identity:81.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00106; PF13561; PF01370; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain;
pfam_id adh_short; adh_short_C2; Epimerase; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2e-32 score:111.5 best_domain_score:111.1 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:1.7e-25 score:89.2 best_domain_score:88.9 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:2.6e-06 score:26.3 best_domain_score:26.1 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:1.3e-11 score:44.0 best_domain_score:43.2 name:KR;
33859 34479 CDS
ID metaerg.pl|06568
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073608352.1 1 205 evalue:1.2e-91 qcov:99.50 identity:76.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF05685;
pfam_desc Putative restriction endonuclease;
pfam_id Uma2;
pfam_target db:Pfam-A.hmm|PF05685.12 evalue:6.7e-35 score:119.4 best_domain_score:119.2 name:Uma2;
35393 34641 CDS
ID metaerg.pl|06569
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015658; GO:0042941; GO:0015808;
allko_ids K11084; K02074; K02032; K02017; K01997; K02003; K02010; K02056; K05847; K02006; K02052; K11072; K02045; K02071; K06861; K01996; K10441; K05816; K02013; K01995; K02049; K01998; K10111; K10562; K11962; K02000; K01990; K02023;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073607986.1 18 250 evalue:2.7e-117 qcov:93.20 identity:90.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.3e-11 score:44.1 best_domain_score:32.5 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:4.6e-34 score:117.1 best_domain_score:116.7 name:ABC_tran;
sprot_desc High-affinity branched-chain amino acid transport ATP-binding protein BraG;
sprot_id sp|P21630|BRAG_PSEAE;
sprot_target db:uniprot_sprot|sp|P21630|BRAG_PSEAE 18 231 evalue:3.6e-36 qcov:85.60 identity:39.50;
tigrfam_acc TIGR03410;
tigrfam_desc urea ABC transporter, ATP-binding protein UrtE;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name urea_trans_UrtE;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR03410 evalue:2.4e-97 score:324.1 best_domain_score:323.9 name:TIGR03410;
36643 35513 CDS
ID metaerg.pl|06570
allgo_ids GO:0005524;
allko_ids K01995; K01998; K11962; K01990; K01997; K02006; K02052; K02045; K06861; K01996;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106921332.1 1 376 evalue:4.2e-191 qcov:100.00 identity:90.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF13304; PF13476; PF00005; PF12399;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; ABC transporter; Branched-chain amino acid ATP-binding cassette transporter;
pfam_id AAA_21; AAA_23; ABC_tran; BCA_ABC_TP_C;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:8.6e-09 score:34.8 best_domain_score:20.1 name:AAA_21; db:Pfam-A.hmm|PF13476.6 evalue:1.1e-06 score:28.6 best_domain_score:27.6 name:AAA_23; db:Pfam-A.hmm|PF00005.27 evalue:2.3e-27 score:95.4 best_domain_score:92.9 name:ABC_tran; db:Pfam-A.hmm|PF12399.8 evalue:4.7e-10 score:38.4 best_domain_score:36.9 name:BCA_ABC_TP_C;
tigrfam_acc TIGR03411;
tigrfam_desc urea ABC transporter, ATP-binding protein UrtD;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name urea_trans_UrtD;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR03411 evalue:6.4e-114 score:378.8 best_domain_score:378.3 name:TIGR03411;
37974 36790 CDS
ID metaerg.pl|06571
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0006865;
allko_ids K06861; K01997; K02057; K01998; K01995;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_081972750.1 1 394 evalue:3.5e-180 qcov:100.00 identity:84.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:9e-52 score:175.1 best_domain_score:175.1 name:BPD_transp_2;
sprot_desc Probable branched-chain amino acid transport permease protein LivM;
sprot_id sp|Q58666|LIVM_METJA;
sprot_target db:uniprot_sprot|sp|Q58666|LIVM_METJA 59 349 evalue:4.5e-09 qcov:73.90 identity:24.80;
tigrfam_acc TIGR03408;
tigrfam_desc urea ABC transporter, permease protein UrtC;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name urea_trans_UrtC;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR03408 evalue:9.4e-132 score:438.6 best_domain_score:438.1 name:TIGR03408;
tm_num 8;
37974 36790 transmembrane_helix
ID metaerg.pl|06572
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i36850-36918o36949-37017i37030-37098o37156-37224i37399-37467o37558-37626i37663-37731o37774-37842i;
39150 37978 CDS
ID metaerg.pl|06573
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0006865;
allko_ids K01997; K02057; K06861; K01998; K01995;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017300899.1 1 390 evalue:1.4e-181 qcov:100.00 identity:85.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:4.7e-57 score:192.4 best_domain_score:190.9 name:BPD_transp_2;
sprot_desc High-affinity branched-chain amino acid transport system permease protein LivH;
sprot_id sp|P0AEX8|LIVH_ECO57;
sprot_target db:uniprot_sprot|sp|P0AEX8|LIVH_ECO57 9 326 evalue:4.5e-17 qcov:81.50 identity:24.70;
tigrfam_acc TIGR03409;
tigrfam_desc urea ABC transporter, permease protein UrtB;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name urea_trans_UrtB;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR03409 evalue:8.1e-109 score:362.9 best_domain_score:200.6 name:TIGR03409;
tm_num 10;
39150 37978 transmembrane_helix
ID metaerg.pl|06574
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i38014-38082o38179-38241i38260-38328o38338-38406i38443-38511o38614-38682i38776-38844o38854-38907i38926-38994o39037-39096i;
40649 39339 CDS
ID metaerg.pl|06575
allgo_ids GO:0033218; GO:0016301; GO:0006865; GO:0051346; GO:0034251;
allko_ids K01769; K11959; K01999;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035990604.1 1 436 evalue:9.1e-230 qcov:100.00 identity:89.90;
kegg_pathway_id 00230; 02010;
kegg_pathway_name Purine metabolism; ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF13433; PF13458;
pfam_desc Periplasmic binding protein domain; Periplasmic binding protein;
pfam_id Peripla_BP_5; Peripla_BP_6;
pfam_target db:Pfam-A.hmm|PF13433.6 evalue:3.3e-173 score:575.0 best_domain_score:574.8 name:Peripla_BP_5; db:Pfam-A.hmm|PF13458.6 evalue:3.4e-81 score:272.8 best_domain_score:272.4 name:Peripla_BP_6;
sp YES;
sprot_desc Aliphatic amidase expression-regulating protein;
sprot_id sp|P27017|AMIC_PSEAE;
sprot_target db:uniprot_sprot|sp|P27017|AMIC_PSEAE 56 411 evalue:9.0e-51 qcov:81.70 identity:32.00;
tigrfam_acc TIGR03407;
tigrfam_desc urea ABC transporter, urea binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name urea_ABC_UrtA;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR03407 evalue:4.2e-185 score:613.9 best_domain_score:613.7 name:TIGR03407;
39339 39455 signal_peptide
ID metaerg.pl|06576
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
41460 40825 CDS
ID metaerg.pl|06577
allgo_ids GO:0005737; GO:0005525; GO:0003924; GO:0016151; GO:0006807;
allko_ids K03189;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO34725.1 1 203 evalue:1.0e-101 qcov:96.20 identity:90.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF02492;
pfam_desc CobW/HypB/UreG, nucleotide-binding domain;
pfam_id cobW;
pfam_target db:Pfam-A.hmm|PF02492.19 evalue:1.8e-36 score:124.6 best_domain_score:124.3 name:cobW;
sprot_desc Urease accessory protein UreG;
sprot_id sp|P72955|UREG_SYNY3;
sprot_target db:uniprot_sprot|sp|P72955|UREG_SYNY3 3 197 evalue:4.8e-90 qcov:92.40 identity:79.50;
tigrfam_acc TIGR00101;
tigrfam_desc urease accessory protein UreG;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name ureG;
tigrfam_sub1role Nitrogen metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR00101 evalue:3.5e-106 score:352.5 best_domain_score:352.3 name:TIGR00101;
43231 41939 CDS
ID metaerg.pl|06578
allec_ids 1.2.1.70;
allgo_ids GO:0008883; GO:0033014; GO:0050661; GO:0055114; GO:0015995; GO:0006782;
allko_ids K02492;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017300904.1 1 430 evalue:1.1e-211 qcov:100.00 identity:88.40;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWY-5188; PWY-5918;
metacyc_pathway_name tetrapyrrole biosynthesis I (from glutamate);; superpathay of heme b biosynthesis from glutamate;;
metacyc_pathway_type Tetrapyrrole-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF03807; PF00745; PF05201; PF02423; PF01488;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; Glutamyl-tRNAGlu reductase, dimerisation domain; Glutamyl-tRNAGlu reductase, N-terminal domain; Ornithine cyclodeaminase/mu-crystallin family; Shikimate / quinate 5-dehydrogenase;
pfam_id F420_oxidored; GlutR_dimer; GlutR_N; OCD_Mu_crystall; Shikimate_DH;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:1.9e-07 score:30.8 best_domain_score:28.5 name:F420_oxidored; db:Pfam-A.hmm|PF00745.20 evalue:1.5e-27 score:95.1 best_domain_score:95.1 name:GlutR_dimer; db:Pfam-A.hmm|PF05201.15 evalue:4.5e-48 score:162.0 best_domain_score:160.4 name:GlutR_N; db:Pfam-A.hmm|PF02423.15 evalue:5.1e-05 score:21.6 best_domain_score:20.3 name:OCD_Mu_crystall; db:Pfam-A.hmm|PF01488.20 evalue:5.6e-39 score:132.6 best_domain_score:130.2 name:Shikimate_DH;
sprot_desc Glutamyl-tRNA reductase;
sprot_id sp|B8HR03|HEM1_CYAP4;
sprot_target db:uniprot_sprot|sp|B8HR03|HEM1_CYAP4 1 421 evalue:4.7e-161 qcov:97.90 identity:71.50;
tigrfam_acc TIGR01035;
tigrfam_desc glutamyl-tRNA reductase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemA;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01035 evalue:4.1e-139 score:463.2 best_domain_score:463.1 name:TIGR01035;
44539 43502 CDS
ID metaerg.pl|06579
allec_ids 3.1.3.11;
allgo_ids GO:0006071; GO:0006094; GO:0042132; GO:0046872; GO:0050278; GO:0019253;
allko_ids K11532; K02446;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035990597.1 1 345 evalue:1.2e-181 qcov:100.00 identity:95.70;
kegg_pathway_id 00030; 00710; 00051; 00010;
kegg_pathway_name Pentose phosphate pathway; Carbon fixation in photosynthetic organisms; Fructose and mannose metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id GLYCOLYSIS-TCA-GLYOX-BYPASS; P185-PWY; P441-PWY; GLUCONEO-PWY; ANAEROFRUCAT-PWY; PHOTOALL-PWY; GLYCOLYSIS; CALVIN-PWY; GLYCOLYSIS-E-D; PWY-5484; P461-PWY;
metacyc_pathway_name superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; formaldehyde assimilation III (dihydroxyacetone cycle);; superpathway of N-acetylneuraminate degradation;; gluconeogenesis I;; homolactic fermentation;; oxygenic photosynthesis;; glycolysis I (from glucose 6-phosphate);; Calvin-Benson-Bassham cycle;; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Formaldehyde-Assimilation;; CARBOXYLATES-DEG; Super-Pathways;; Gluconeogenesis;; Fermentation-to-Lactate; Super-Pathways;; Photosynthesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;;
pfam_acc PF03320;
pfam_desc Bacterial fructose-1,6-bisphosphatase, glpX-encoded;
pfam_id FBPase_glpX;
pfam_target db:Pfam-A.hmm|PF03320.13 evalue:2e-130 score:433.4 best_domain_score:433.2 name:FBPase_glpX;
sprot_desc D-fructose 1,6-bisphosphatase class 2/sedoheptulose 1,7-bisphosphatase;
sprot_id sp|Q3M6T3|FBSB_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M6T3|FBSB_ANAVT 1 344 evalue:2.1e-167 qcov:99.70 identity:88.10;
tigrfam_acc TIGR00330;
tigrfam_desc fructose-1,6-bisphosphatase, class II;
tigrfam_mainrole Energy metabolism;
tigrfam_name glpX;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00330 evalue:5.3e-105 score:350.4 best_domain_score:349.9 name:TIGR00330;
45826 44768 CDS
ID metaerg.pl|06580
allko_ids K01448; K01183; K01179;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV09277.1 1 350 evalue:1.1e-87 qcov:99.40 identity:52.60;
kegg_pathway_id 00550; 00500; 00530;
kegg_pathway_name Peptidoglycan biosynthesis; Starch and sucrose metabolism; Aminosugars metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00395;
pfam_desc S-layer homology domain;
pfam_id SLH;
pfam_target db:Pfam-A.hmm|PF00395.20 evalue:7.2e-24 score:82.8 best_domain_score:35.1 name:SLH;
tm_num 1;
45826 44768 transmembrane_helix
ID metaerg.pl|06581
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i44876-44935o;
48476 45999 CDS
ID metaerg.pl|06582
allgo_ids GO:0005524; GO:0009507; GO:0019538;
allko_ids K02340; K02343; K02341;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017300907.1 1 823 evalue:0.0e+00 qcov:99.80 identity:88.50;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00004; PF07724; PF13401; PF07728; PF17871; PF10431; PF02861; PF01695; PF01078; PF00910; PF05496; PF00158; PF05621;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); AAA domain; AAA domain (dynein-related subfamily); AAA lid domain; C-terminal, D2-small domain, of ClpB protein ; Clp amino terminal domain, pathogenicity island component; IstB-like ATP binding protein; Magnesium chelatase, subunit ChlI; RNA helicase; Holliday junction DNA helicase RuvB P-loop domain; Sigma-54 interaction domain; Bacterial TniB protein;
pfam_id AAA; AAA_2; AAA_22; AAA_5; AAA_lid_9; ClpB_D2-small; Clp_N; IstB_IS21; Mg_chelatase; RNA_helicase; RuvB_N; Sigma54_activat; TniB;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:8.1e-24 score:83.8 best_domain_score:49.3 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:6.5e-54 score:181.8 best_domain_score:174.2 name:AAA_2; db:Pfam-A.hmm|PF13401.6 evalue:2.2e-10 score:40.2 best_domain_score:21.3 name:AAA_22; db:Pfam-A.hmm|PF07728.14 evalue:1.5e-18 score:66.3 best_domain_score:40.4 name:AAA_5; db:Pfam-A.hmm|PF17871.1 evalue:4.5e-32 score:109.3 best_domain_score:108.3 name:AAA_lid_9; db:Pfam-A.hmm|PF10431.9 evalue:3.1e-23 score:80.9 best_domain_score:80.0 name:ClpB_D2-small; db:Pfam-A.hmm|PF02861.20 evalue:4e-31 score:106.2 best_domain_score:53.8 name:Clp_N; db:Pfam-A.hmm|PF01695.17 evalue:1.2e-07 score:30.8 best_domain_score:16.4 name:IstB_IS21; db:Pfam-A.hmm|PF01078.21 evalue:7.7e-06 score:24.7 best_domain_score:11.6 name:Mg_chelatase; db:Pfam-A.hmm|PF00910.22 evalue:1.1e-05 score:25.0 best_domain_score:10.5 name:RNA_helicase; db:Pfam-A.hmm|PF05496.12 evalue:3e-05 score:23.0 best_domain_score:8.1 name:RuvB_N; db:Pfam-A.hmm|PF00158.26 evalue:7.4e-10 score:38.0 best_domain_score:25.8 name:Sigma54_activat; db:Pfam-A.hmm|PF05621.11 evalue:6.5e-08 score:31.4 best_domain_score:21.7 name:TniB;
sprot_desc ATP-dependent Clp protease ATP-binding subunit ClpA homolog;
sprot_id sp|O78410|CLPC_GUITH;
sprot_target db:uniprot_sprot|sp|O78410|CLPC_GUITH 1 809 evalue:1.4e-278 qcov:98.10 identity:61.90;
48918 49259 CDS
ID metaerg.pl|06583
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Halomicronema;s__Halomicronema hongdechloris;
genomedb_acc GCF_002075285.2;
genomedb_target db:genomedb|GCF_002075285.2|WP_080811212.1 18 109 evalue:2.6e-27 qcov:81.40 identity:63.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF07862;
pfam_desc Nif11 domain;
pfam_id Nif11;
pfam_target db:Pfam-A.hmm|PF07862.11 evalue:3.5e-12 score:45.7 best_domain_score:45.1 name:Nif11;
tigrfam_acc TIGR03798;
tigrfam_desc nif11-like leader peptide domain;
tigrfam_mainrole Cellular processes;
tigrfam_name ocin_TIGR03798;
tigrfam_sub1role Biosynthesis of natural products;
tigrfam_target db:TIGRFAMs.hmm|TIGR03798 evalue:6.7e-09 score:35.0 best_domain_score:34.6 name:TIGR03798;
49565 50572 CDS
ID metaerg.pl|06584
allec_ids 1.2.1.12; 1.2.1.-;
allgo_ids GO:0016620; GO:0055114; GO:0005737; GO:0004365; GO:0051287; GO:0050661; GO:0006094; GO:0006096;
allko_ids K10705; K00134;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106903930.1 1 335 evalue:5.1e-172 qcov:100.00 identity:89.90;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWY-5484; P461-PWY; PWY-5195; PWY-5482; P441-PWY; PWY-1042; ANAEROFRUCAT-PWY; PWY-3801; PWY-5464; ANAGLYCOLYSIS-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; GLYCOLYSIS-E-D; P122-PWY; 4TOLCARBDEG-PWY; P41-PWY; P105-PWY; PWY-5305; PWY-6537; PWY-321; GLYCOLYSIS; ANARESP1-PWY; GLUCONEO-PWY; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; TOLSULFDEG-PWY; P124-PWY; P185-PWY; PWY-5537;
metacyc_pathway_name glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; artemisinin and arteannuin B biosynthesis;; pyruvate fermentation to acetate II;; superpathway of N-acetylneuraminate degradation;; glycolysis IV (plant cytosol);; homolactic fermentation;; sucrose degradation II (sucrose synthase);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; superpathway of glycolysis and the Entner-Doudoroff pathway;; heterolactic fermentation;; 4-toluenecarboxylate degradation;; pyruvate fermentation to acetate and (S)-lactate I;; TCA cycle IV (2-oxoglutarate decarboxylase);; bixin biosynthesis;; 4-aminobutanoate degradation II;; cutin biosynthesis;; glycolysis I (from glucose 6-phosphate);; ; gluconeogenesis I;; 4-hydroxyphenylacetate degradation;; 4-toluenesulfonate degradation I;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; pyruvate fermentation to acetate V;;
metacyc_pathway_type GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; SESQUITERPENE-LACTONE;; Pyruvate-Acetate-Fermentation;; CARBOXYLATES-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; SUCROSE-DEG;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; AROMATIC-COMPOUNDS-DEGRADATION;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; TCA-VARIANTS;; APOCAROTENOID-SYN;; 4-Aminobutyraye-Degradation;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; GLYCOLYSIS-VARIANTS;; ; Gluconeogenesis;; AROMATIC-COMPOUNDS-DEGRADATION;; 4-Toluenesulfonate-Degradation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; Pyruvate-Acetate-Fermentation; Super-Pathways;;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:2.9e-61 score:204.9 best_domain_score:203.6 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:3.6e-32 score:109.9 best_domain_score:104.8 name:Gp_dh_N;
sprot_desc Glyceraldehyde-3-phosphate dehydrogenase 3;
sprot_id sp|P34918|G3P3_ANAVT;
sprot_target db:uniprot_sprot|sp|P34918|G3P3_ANAVT 2 335 evalue:6.7e-155 qcov:99.70 identity:79.10;
tigrfam_acc TIGR01534;
tigrfam_desc glyceraldehyde-3-phosphate dehydrogenase, type I;
tigrfam_mainrole Energy metabolism;
tigrfam_name GAPDH-I;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01534 evalue:2.6e-115 score:384.3 best_domain_score:384.1 name:TIGR01534;
50706 51953 CDS
ID metaerg.pl|06585
allgo_ids GO:0016021; GO:0055085;
allko_ids K08222; K08219; K08217;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035985017.1 1 413 evalue:9.0e-203 qcov:99.50 identity:89.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:5.7e-20 score:70.8 best_domain_score:51.3 name:MFS_1;
tm_num 11;
50706 51953 transmembrane_helix
ID metaerg.pl|06586
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i50742-50810o50838-50906i50925-50993o51006-51065i51144-51212o51240-51299i51360-51428o51456-51524i51582-51641o51669-51737i51843-51911o;
52484 52002 CDS
ID metaerg.pl|06587
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Elainellales;f__Elainellaceae;g__Elainella;s__Elainella saxicola;
genomedb_acc GCA_002796835.1;
genomedb_target db:genomedb|GCA_002796835.1|LUGL01000093.1_60 1 160 evalue:2.8e-67 qcov:100.00 identity:80.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF04008;
pfam_desc Adenosine specific kinase;
pfam_id Adenosine_kin;
pfam_target db:Pfam-A.hmm|PF04008.14 evalue:5.8e-77 score:256.0 best_domain_score:255.8 name:Adenosine_kin;
53977 52526 CDS
ID metaerg.pl|06588
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_084172847.1 1 481 evalue:6.6e-181 qcov:99.60 identity:67.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00004;
pfam_desc ATPase family associated with various cellular activities (AAA);
pfam_id AAA;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:8.9e-05 score:22.2 best_domain_score:21.2 name:AAA;
54380 53964 CDS
ID metaerg.pl|06589
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106923401.1 1 138 evalue:1.8e-62 qcov:100.00 identity:82.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00903;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:1.8e-08 score:33.9 best_domain_score:33.6 name:Glyoxalase;
54902 54390 CDS
ID metaerg.pl|06590
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106873192.1 1 170 evalue:2.9e-91 qcov:100.00 identity:91.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF09654;
pfam_desc Protein of unknown function (DUF2396);
pfam_id DUF2396;
pfam_target db:Pfam-A.hmm|PF09654.10 evalue:4e-88 score:292.8 best_domain_score:292.6 name:DUF2396;
tigrfam_acc TIGR02652;
tigrfam_desc TIGR02652 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR02652;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR02652 evalue:2.9e-89 score:296.4 best_domain_score:296.3 name:TIGR02652;
55081 55608 CDS
ID metaerg.pl|06591
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073606849.1 4 174 evalue:3.0e-75 qcov:97.70 identity:81.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00132; PF14602;
pfam_desc Bacterial transferase hexapeptide (six repeats); Hexapeptide repeat of succinyl-transferase;
pfam_id Hexapep; Hexapep_2;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:8.2e-16 score:56.3 best_domain_score:32.2 name:Hexapep; db:Pfam-A.hmm|PF14602.6 evalue:4.2e-07 score:28.8 best_domain_score:25.2 name:Hexapep_2;
sprot_desc hypothetical protein;
sprot_id sp|Q57752|Y304_METJA;
sprot_target db:uniprot_sprot|sp|Q57752|Y304_METJA 15 162 evalue:4.3e-20 qcov:84.60 identity:49.30;
56709 55705 CDS
ID metaerg.pl|06592
allec_ids 1.8.1.9;
allgo_ids GO:0071949; GO:0005737; GO:0004791; GO:0019430;
allko_ids K00384;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017300873.1 1 334 evalue:4.4e-168 qcov:100.00 identity:83.80;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id THIOREDOX-PWY;
metacyc_pathway_name thioredoxin pathway;;
metacyc_pathway_type Reductants;;
pfam_acc PF00890; PF01494; PF13450; PF07992;
pfam_desc FAD binding domain; FAD binding domain; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id FAD_binding_2; FAD_binding_3; NAD_binding_8; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:6.3e-09 score:34.6 best_domain_score:33.1 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:5.5e-06 score:25.1 best_domain_score:22.7 name:FAD_binding_3; db:Pfam-A.hmm|PF13450.6 evalue:1.5e-08 score:34.0 best_domain_score:33.0 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:1.8e-16 score:59.5 best_domain_score:55.7 name:Pyr_redox_2;
sprot_desc Thioredoxin reductase;
sprot_id sp|Q8T6Z1|TRXB_SPIBA;
sprot_target db:uniprot_sprot|sp|Q8T6Z1|TRXB_SPIBA 19 308 evalue:8.5e-09 qcov:86.80 identity:23.30;
57600 57028 CDS
ID metaerg.pl|06593
allec_ids 1.11.1.15;
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005737; GO:0042802; GO:0008379; GO:0045454; GO:0034599; GO:0042744;
allko_ids K11188; K14171; K00430; K11187; K00540; K03386;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Neosynechococcales;f__Neosynechococcaceae;g__GCF-001939115;s__GCF-001939115 sp001939115;
genomedb_acc GCF_001939115.1;
genomedb_target db:genomedb|GCF_001939115.1|WP_075598050.1 1 190 evalue:1.4e-97 qcov:100.00 identity:87.90;
kegg_pathway_id 00680; 00940; 00360;
kegg_pathway_name Methane metabolism; Phenylpropanoid biosynthesis; Phenylalanine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:6.4e-13 score:48.0 best_domain_score:47.6 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:3.3e-31 score:107.2 best_domain_score:107.1 name:Redoxin;
sprot_desc Peroxiredoxin sll1621;
sprot_id sp|P73728|PRX5_SYNY3;
sprot_target db:uniprot_sprot|sp|P73728|PRX5_SYNY3 5 190 evalue:2.1e-89 qcov:97.90 identity:80.60;
57908 58321 CDS
ID metaerg.pl|06594
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106921852.1 1 137 evalue:2.9e-57 qcov:100.00 identity:78.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF01475;
pfam_desc Ferric uptake regulator family;
pfam_id FUR;
pfam_target db:Pfam-A.hmm|PF01475.19 evalue:1e-23 score:83.0 best_domain_score:82.6 name:FUR;
58415 58663 CDS
ID metaerg.pl|06595
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035991364.1 1 74 evalue:1.1e-24 qcov:90.20 identity:64.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
tm_num 2;
58415 58663 transmembrane_helix
ID metaerg.pl|06596
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology o58457-58525i58544-58612o;
59358 58945 CDS
ID metaerg.pl|06597
allec_ids 3.1.2.28;
allgo_ids GO:0016790; GO:0042372;
allko_ids K12073;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZU93673.1 1 137 evalue:1.9e-45 qcov:100.00 identity:62.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF03061; PF13279;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily;
pfam_id 4HBT; 4HBT_2;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:7e-09 score:35.2 best_domain_score:34.7 name:4HBT; db:Pfam-A.hmm|PF13279.6 evalue:4.7e-13 score:48.9 best_domain_score:48.6 name:4HBT_2;
sprot_desc 1,4-dihydroxy-2-naphthoyl-CoA hydrolase;
sprot_id sp|B2IZ83|DNCH_NOSP7;
sprot_target db:uniprot_sprot|sp|B2IZ83|DNCH_NOSP7 1 133 evalue:7.7e-33 qcov:97.10 identity:48.10;
60775 59405 CDS
ID metaerg.pl|06598
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO43063.1 113 456 evalue:1.3e-125 qcov:75.40 identity:70.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:9.4e-33 score:111.5 best_domain_score:110.4 name:Peptidase_M23;
sp YES;
59405 59536 signal_peptide
ID metaerg.pl|06599
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
61674 60784 CDS
ID metaerg.pl|06600
allec_ids 6.3.4.15;
allgo_ids GO:0006464;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO43065.1 43 296 evalue:9.9e-103 qcov:85.80 identity:71.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWY0-1264;
metacyc_pathway_name biotin-carboxyl carrier protein assembly;;
metacyc_pathway_type Lipid-Biosynthesis;;
pfam_acc PF03099;
pfam_desc Biotin/lipoate A/B protein ligase family;
pfam_id BPL_LplA_LipB;
pfam_target db:Pfam-A.hmm|PF03099.19 evalue:3.5e-17 score:61.8 best_domain_score:61.2 name:BPL_LplA_LipB;
tigrfam_acc TIGR00121;
tigrfam_desc biotin--[acetyl-CoA-carboxylase] ligase;
tigrfam_mainrole Protein fate;
tigrfam_name birA_ligase;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00121 evalue:3.4e-46 score:156.9 best_domain_score:156.6 name:TIGR00121;
62007 62798 CDS
ID metaerg.pl|06601
allec_ids 1.10.3.-;
allgo_ids GO:0005507; GO:0016491;
allko_ids K05810;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073611296.1 5 263 evalue:5.9e-91 qcov:98.50 identity:66.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWY-5439; PWY-5466; PWY-5405; PWY-5787; PWY-5404; PWY-5476;
metacyc_pathway_name betacyanin biosynthesis (via dopamine);; matairesinol biosynthesis;; superpathway of betalain biosynthesis;; oligomeric urushiol biosynthesis;; betaxanthin biosynthesis (via dopaxanthin);; cornusiin E biosynthesis;;
metacyc_pathway_type BETALAIN-ALKALOIDS;; LIGNAN-SYN;; BETALAIN-ALKALOIDS; Super-Pathways;; AROMATIC-COMPOUNDS-BIOSYN;; BETALAIN-ALKALOIDS;; ELLAGITANNINS;;
pfam_acc PF02578;
pfam_desc Multi-copper polyphenol oxidoreductase laccase;
pfam_id Cu-oxidase_4;
pfam_target db:Pfam-A.hmm|PF02578.15 evalue:2e-48 score:164.3 best_domain_score:163.9 name:Cu-oxidase_4;
sprot_desc Polyphenol oxidase;
sprot_id sp|P74606|POLOX_SYNY3;
sprot_target db:uniprot_sprot|sp|P74606|POLOX_SYNY3 3 262 evalue:5.2e-70 qcov:98.90 identity:51.30;
tigrfam_acc TIGR00726;
tigrfam_desc YfiH family protein;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00726;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00726 evalue:6.1e-59 score:198.2 best_domain_score:197.7 name:TIGR00726;
64393 62795 CDS
ID metaerg.pl|06602
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZU94267.1 5 532 evalue:3.1e-192 qcov:99.20 identity:64.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
tm_num 1;
64393 62795 transmembrane_helix
ID metaerg.pl|06603
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i62855-62914o;
65199 64396 CDS
ID metaerg.pl|06604
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106867928.1 19 267 evalue:6.2e-104 qcov:93.30 identity:74.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF09323;
pfam_desc Domain of unknown function (DUF1980);
pfam_id DUF1980;
pfam_target db:Pfam-A.hmm|PF09323.10 evalue:7.4e-08 score:31.7 best_domain_score:31.4 name:DUF1980;
tigrfam_acc TIGR03943;
tigrfam_desc TIGR03943 family protein;
tigrfam_name TIGR03943;
tigrfam_target db:TIGRFAMs.hmm|TIGR03943 evalue:1.8e-61 score:206.5 best_domain_score:206.2 name:TIGR03943;
tm_num 3;
65199 64396 transmembrane_helix
ID metaerg.pl|06605
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i64456-64524o64555-64623i64684-64752o;
66342 65269 CDS
ID metaerg.pl|06606
allgo_ids GO:0016021; GO:0005886;
allko_ids K07089;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO37951.1 1 357 evalue:2.1e-144 qcov:100.00 identity:80.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF03773;
pfam_desc Predicted permease;
pfam_id ArsP_1;
pfam_target db:Pfam-A.hmm|PF03773.13 evalue:6.8e-76 score:254.4 best_domain_score:254.2 name:ArsP_1;
sprot_desc hypothetical protein;
sprot_id sp|P94395|YCGR_BACSU;
sprot_target db:uniprot_sprot|sp|P94395|YCGR_BACSU 2 341 evalue:5.3e-41 qcov:95.20 identity:34.90;
tm_num 8;
66342 65269 transmembrane_helix
ID metaerg.pl|06607
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i65302-65370o65413-65481i65518-65586o65614-65673i65977-66045o66055-66123i66142-66210o66268-66336i;
67782 66748 CDS
ID metaerg.pl|06608
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073610451.1 7 341 evalue:6.6e-151 qcov:97.40 identity:75.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
68515 67934 CDS
ID metaerg.pl|06609
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__UBA5069;s__UBA5069 sp002415895;
genomedb_acc GCA_002415895.1;
genomedb_target db:genomedb|GCA_002415895.1|DIAV01000387.1_34 10 192 evalue:3.4e-19 qcov:94.80 identity:36.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
sp YES;
67934 67996 lipoprotein_signal_peptide
ID metaerg.pl|06610
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
70486 69020 CDS
ID metaerg.pl|06611
allgo_ids GO:0008643; GO:0015288; GO:0016021;
allko_ids K01448;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035986790.1 10 488 evalue:7.4e-172 qcov:98.20 identity:66.60;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF04966; PF00395;
pfam_desc Carbohydrate-selective porin, OprB family; S-layer homology domain;
pfam_id OprB; SLH;
pfam_target db:Pfam-A.hmm|PF04966.12 evalue:2.4e-28 score:98.9 best_domain_score:96.9 name:OprB; db:Pfam-A.hmm|PF00395.20 evalue:1.6e-08 score:33.7 best_domain_score:32.6 name:SLH;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|Q8YNL5|Y4550_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YNL5|Y4550_NOSS1 50 488 evalue:2.3e-47 qcov:90.00 identity:32.50;
69020 69094 signal_peptide
ID metaerg.pl|06612
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
71068 72201 CDS
ID metaerg.pl|06613
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035992458.1 1 374 evalue:2.5e-135 qcov:99.20 identity:66.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF02698;
pfam_desc DUF218 domain;
pfam_id DUF218;
pfam_target db:Pfam-A.hmm|PF02698.17 evalue:3.9e-10 score:39.1 best_domain_score:38.3 name:DUF218;
tm_num 4;
71068 72201 transmembrane_helix
ID metaerg.pl|06614
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology o71080-71139i71158-71217o71245-71313i71350-71409o;
72287 74029 CDS
ID metaerg.pl|06615
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887; GO:0046677;
allko_ids K10111; K05816; K02023; K02000; K02006; K02052; K02017; K06861; K01996; K02045; K18889;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017301866.1 1 580 evalue:6.1e-274 qcov:100.00 identity:87.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-6188; PWY-6166; PWY-6135; PWY-6171;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; ; ; ; ;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:3.5e-46 score:157.3 best_domain_score:156.7 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:3.8e-32 score:110.9 best_domain_score:108.4 name:ABC_tran;
sprot_desc Probable multidrug resistance ABC transporter ATP-binding/permease protein YheI;
sprot_id sp|O07550|YHEI_BACSU;
sprot_target db:uniprot_sprot|sp|O07550|YHEI_BACSU 4 575 evalue:3.3e-85 qcov:98.60 identity:32.40;
tm_num 5;
72287 74029 transmembrane_helix
ID metaerg.pl|06616
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i72344-72412o72440-72508i72677-72745o72758-72811i73019-73087o;
74245 74060 CDS
ID metaerg.pl|06617
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
tm_num 2;
74245 74060 transmembrane_helix
ID metaerg.pl|06618
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i74084-74152o74162-74230i;
75619 74405 CDS
ID metaerg.pl|06619
allec_ids 1.17.7.4; 1.17.1.2;
allgo_ids GO:0019288; GO:0046872; GO:0050992; GO:0051745; GO:0051539; GO:0016114;
allko_ids K03527;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO45647.1 1 402 evalue:6.3e-209 qcov:99.50 identity:88.80;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id NONMEVIPP-PWY; PWY-6270; PWY-5121;
metacyc_pathway_name methylerythritol phosphate pathway I;; isoprene biosynthesis I;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);;
metacyc_pathway_type MEP-Pathways;; ISOPRENOIDS; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;;
pfam_acc PF02401;
pfam_desc LytB protein;
pfam_id LYTB;
pfam_target db:Pfam-A.hmm|PF02401.18 evalue:3.5e-83 score:278.1 best_domain_score:277.9 name:LYTB;
sprot_desc 4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
sprot_id sp|Q8DK29|ISPH_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DK29|ISPH_THEEB 1 398 evalue:5.0e-181 qcov:98.50 identity:77.10;
tigrfam_acc TIGR00216;
tigrfam_desc 4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ispH_lytB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00216 evalue:2.2e-93 score:311.7 best_domain_score:311.3 name:TIGR00216;
76616 75786 CDS
ID metaerg.pl|06620
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_026073061.1 14 276 evalue:2.7e-131 qcov:95.30 identity:85.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF04536;
pfam_desc TPM domain;
pfam_id TPM_phosphatase;
pfam_target db:Pfam-A.hmm|PF04536.14 evalue:2.1e-08 score:33.6 best_domain_score:33.2 name:TPM_phosphatase;
sp YES;
tm_num 4;
75786 75902 signal_peptide
ID metaerg.pl|06621
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
76616 75786 transmembrane_helix
ID metaerg.pl|06622
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology o75813-75881i76341-76400o76428-76496i76533-76586o;
77333 76758 CDS
ID metaerg.pl|06623
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106923994.1 1 148 evalue:1.7e-39 qcov:77.50 identity:64.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
tm_num 1;
77333 76758 transmembrane_helix
ID metaerg.pl|06624
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i76770-76838o;
77689 77357 CDS
ID metaerg.pl|06625
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZU96923.1 1 99 evalue:2.3e-36 qcov:90.00 identity:80.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF12732;
pfam_desc YtxH-like protein;
pfam_id YtxH;
pfam_target db:Pfam-A.hmm|PF12732.7 evalue:2e-13 score:49.9 best_domain_score:49.6 name:YtxH;
tm_num 1;
77689 77357 transmembrane_helix
ID metaerg.pl|06626
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i77375-77443o;
78109 77759 CDS
ID metaerg.pl|06627
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073608889.1 1 92 evalue:7.5e-22 qcov:79.30 identity:57.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
tm_num 1;
78109 77759 transmembrane_helix
ID metaerg.pl|06628
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i77762-77830o;
78244 80391 CDS
ID metaerg.pl|06629
allko_ids K01183; K01179; K01225; K01448; K01181;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073608890.1 4 711 evalue:5.6e-245 qcov:99.00 identity:62.00;
kegg_pathway_id 00530; 00500; 00550;
kegg_pathway_name Aminosugars metabolism; Starch and sucrose metabolism; Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF13229; PF07602; PF05048; PF00395;
pfam_desc Right handed beta helix region; Protein of unknown function (DUF1565); Periplasmic copper-binding protein (NosD); S-layer homology domain;
pfam_id Beta_helix; DUF1565; NosD; SLH;
pfam_target db:Pfam-A.hmm|PF13229.6 evalue:4.4e-09 score:35.6 best_domain_score:34.5 name:Beta_helix; db:Pfam-A.hmm|PF07602.11 evalue:4.9e-34 score:117.0 best_domain_score:115.7 name:DUF1565; db:Pfam-A.hmm|PF05048.13 evalue:7.1e-08 score:31.2 best_domain_score:30.3 name:NosD; db:Pfam-A.hmm|PF00395.20 evalue:1.2e-63 score:210.1 best_domain_score:63.2 name:SLH;
80508 80840 CDS
ID metaerg.pl|06630
allgo_ids GO:0009523; GO:0009654; GO:0015979; GO:0016020;
allko_ids K08903;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__CCP5;s__CCP5 sp003017785;
genomedb_acc GCF_003017785.1;
genomedb_target db:genomedb|GCF_003017785.1|WP_106873436.1 1 110 evalue:5.5e-51 qcov:100.00 identity:89.20;
kegg_pathway_id 00195;
kegg_pathway_name Photosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF03912;
pfam_desc Psb28 protein;
pfam_id Psb28;
pfam_target db:Pfam-A.hmm|PF03912.14 evalue:9.7e-44 score:147.2 best_domain_score:147.1 name:Psb28;
sprot_desc Photosystem II reaction center Psb28 protein;
sprot_id sp|Q8DLJ8|PSB28_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DLJ8|PSB28_THEEB 1 110 evalue:9.0e-40 qcov:100.00 identity:70.00;
tigrfam_acc TIGR03047;
tigrfam_desc photosystem II reaction center protein Psb28;
tigrfam_mainrole Energy metabolism;
tigrfam_name PS_II_psb28;
tigrfam_sub1role Photosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR03047 evalue:6.9e-46 score:154.2 best_domain_score:154.0 name:TIGR03047;
80854 81348 CDS
ID metaerg.pl|06631
allgo_ids GO:0006777;
allko_ids K03638;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035993016.1 2 163 evalue:7.0e-66 qcov:98.80 identity:80.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00994;
pfam_desc Probable molybdopterin binding domain;
pfam_id MoCF_biosynth;
pfam_target db:Pfam-A.hmm|PF00994.24 evalue:5.3e-34 score:116.2 best_domain_score:116.0 name:MoCF_biosynth;
sprot_desc Molybdenum cofactor biosynthesis protein B;
sprot_id sp|Q9K8I4|MOAB_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K8I4|MOAB_BACHD 3 159 evalue:7.3e-38 qcov:95.70 identity:51.90;
tigrfam_acc TIGR00177;
tigrfam_desc molybdenum cofactor synthesis domain;
tigrfam_name molyb_syn;
tigrfam_target db:TIGRFAMs.hmm|TIGR00177 evalue:1.9e-34 score:117.9 best_domain_score:117.7 name:TIGR00177;
81467 82429 CDS
ID metaerg.pl|06632
allec_ids 1.-.-.-;
allgo_ids GO:0009507; GO:0009941; GO:0009535; GO:0010287; GO:0016491;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106868435.1 6 316 evalue:8.1e-143 qcov:97.20 identity:80.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWY-4302; PWY-5271; PWY-5826; PWY-2821; PWY-5469; PWY-5479; PWY-5987; PWY-6113; PWYG-321;
metacyc_pathway_name aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00248;
pfam_desc Aldo/keto reductase family;
pfam_id Aldo_ket_red;
pfam_target db:Pfam-A.hmm|PF00248.21 evalue:4.7e-67 score:225.5 best_domain_score:225.3 name:Aldo_ket_red;
sprot_desc Uncharacterized oxidoreductase At1g06690, chloroplastic;
sprot_id sp|Q94A68|Y1669_ARATH;
sprot_target db:uniprot_sprot|sp|Q94A68|Y1669_ARATH 10 320 evalue:2.9e-75 qcov:97.20 identity:47.10;
82603 82944 CDS
ID metaerg.pl|06633
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106919573.1 1 111 evalue:1.1e-38 qcov:98.20 identity:80.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF05635;
pfam_desc 23S rRNA-intervening sequence protein;
pfam_id 23S_rRNA_IVP;
pfam_target db:Pfam-A.hmm|PF05635.11 evalue:5.4e-18 score:64.5 best_domain_score:64.3 name:23S_rRNA_IVP;
tigrfam_acc TIGR02436;
tigrfam_desc four helix bundle protein;
tigrfam_name TIGR02436;
tigrfam_target db:TIGRFAMs.hmm|TIGR02436 evalue:5.6e-23 score:80.4 best_domain_score:80.2 name:TIGR02436;
85432 83081 CDS
ID metaerg.pl|06634
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae;g__Planktothrix;s__Planktothrix paucivesiculata;
genomedb_acc GCA_900009265.1;
genomedb_target db:genomedb|GCA_900009265.1|CUR08780.1 13 740 evalue:1.9e-201 qcov:93.00 identity:51.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF05419; PF05729;
pfam_desc GUN4-like ; NACHT domain;
pfam_id GUN4; NACHT;
pfam_target db:Pfam-A.hmm|PF05419.12 evalue:8.2e-36 score:122.4 best_domain_score:121.3 name:GUN4; db:Pfam-A.hmm|PF05729.12 evalue:9.2e-13 score:47.7 best_domain_score:46.5 name:NACHT;
85891 85541 CDS
ID metaerg.pl|06635
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
86142 85888 CDS
ID metaerg.pl|06636
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO42510.1 1 83 evalue:1.1e-27 qcov:98.80 identity:77.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
86304 86549 CDS
ID metaerg.pl|06637
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035985117.1 1 76 evalue:1.5e-21 qcov:93.80 identity:69.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
86552 86875 CDS
ID metaerg.pl|06638
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035985117.1 1 105 evalue:6.6e-41 qcov:98.10 identity:77.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF05685;
pfam_desc Putative restriction endonuclease;
pfam_id Uma2;
pfam_target db:Pfam-A.hmm|PF05685.12 evalue:1e-20 score:73.2 best_domain_score:73.0 name:Uma2;
87099 88460 CDS
ID metaerg.pl|06639
allec_ids 2.8.4.3; 2.1.1.- 2.8.1.-;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0016740; GO:0006400;
allko_ids K06168;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106867612.1 1 453 evalue:1.5e-251 qcov:100.00 identity:94.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF04055; PF01938; PF00919;
pfam_desc Radical SAM superfamily; TRAM domain; Uncharacterized protein family UPF0004;
pfam_id Radical_SAM; TRAM; UPF0004;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:1.4e-27 score:96.4 best_domain_score:95.7 name:Radical_SAM; db:Pfam-A.hmm|PF01938.20 evalue:6.7e-15 score:54.1 best_domain_score:53.2 name:TRAM; db:Pfam-A.hmm|PF00919.20 evalue:5.6e-30 score:102.5 best_domain_score:101.2 name:UPF0004;
sprot_desc tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase;
sprot_id sp|Q3M8N9|MIAB_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M8N9|MIAB_ANAVT 1 447 evalue:6.2e-228 qcov:98.70 identity:85.50;
tigrfam_acc TIGR00089; TIGR01574;
tigrfam_desc radical SAM methylthiotransferase, MiaB/RimO family; tRNA-i(6)A37 thiotransferase enzyme MiaB;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00089; miaB-methiolase;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00089 evalue:1.1e-150 score:501.3 best_domain_score:501.1 name:TIGR00089; db:TIGRFAMs.hmm|TIGR01574 evalue:5.5e-134 score:446.6 best_domain_score:446.4 name:TIGR01574;
88585 89340 CDS
ID metaerg.pl|06640
allgo_ids GO:0008168;
allko_ids K03183; K00599;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106923178.1 8 246 evalue:3.5e-93 qcov:95.20 identity:72.70;
kegg_pathway_id 00626; 00450; 00340; 00380; 00150; 00130; 00350;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Histidine metabolism; Tryptophan metabolism; Androgen and estrogen metabolism; Ubiquinone biosynthesis; Tyrosine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF06080; PF08241; PF08242; PF00891; PF13489; PF13649; PF13847; PF02390; PF02475; PF05175; PF01135; PF01209;
pfam_desc Protein of unknown function (DUF938); Methyltransferase domain; Methyltransferase domain; O-methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Putative methyltransferase ; Met-10+ like-protein; Methyltransferase small domain; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); ubiE/COQ5 methyltransferase family;
pfam_id DUF938; Methyltransf_11; Methyltransf_12; Methyltransf_2; Methyltransf_23; Methyltransf_25; Methyltransf_31; Methyltransf_4; Met_10; MTS; PCMT; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF06080.12 evalue:9.1e-06 score:24.8 best_domain_score:23.4 name:DUF938; db:Pfam-A.hmm|PF08241.12 evalue:1.6e-16 score:60.0 best_domain_score:59.1 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:9.4e-14 score:51.2 best_domain_score:50.4 name:Methyltransf_12; db:Pfam-A.hmm|PF00891.18 evalue:1.5e-08 score:33.5 best_domain_score:33.1 name:Methyltransf_2; db:Pfam-A.hmm|PF13489.6 evalue:1.7e-09 score:36.9 best_domain_score:36.6 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:2.6e-16 score:59.4 best_domain_score:58.3 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:9.6e-20 score:70.2 best_domain_score:69.7 name:Methyltransf_31; db:Pfam-A.hmm|PF02390.17 evalue:3.2e-06 score:26.0 best_domain_score:23.7 name:Methyltransf_4; db:Pfam-A.hmm|PF02475.16 evalue:4.4e-06 score:25.8 best_domain_score:25.5 name:Met_10; db:Pfam-A.hmm|PF05175.14 evalue:2.6e-06 score:26.3 best_domain_score:25.7 name:MTS; db:Pfam-A.hmm|PF01135.19 evalue:1.1e-07 score:31.0 best_domain_score:29.4 name:PCMT; db:Pfam-A.hmm|PF01209.18 evalue:1.9e-08 score:33.2 best_domain_score:32.8 name:Ubie_methyltran;
sp YES;
88585 88665 lipoprotein_signal_peptide
ID metaerg.pl|06641
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
89379 89918 CDS
ID metaerg.pl|06642
allgo_ids GO:0005509; GO:0009523; GO:0009654; GO:0015979; GO:0019898; GO:0009507; GO:0009570; GO:0009543; GO:0009535; GO:0016020; GO:0009579; GO:0031977; GO:0048564;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106923177.1 1 179 evalue:6.4e-73 qcov:100.00 identity:79.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF01789;
pfam_desc PsbP;
pfam_id PsbP;
pfam_target db:Pfam-A.hmm|PF01789.16 evalue:2.1e-48 score:163.6 best_domain_score:163.4 name:PsbP;
sp YES;
sprot_desc PsbP domain-containing protein 1, chloroplastic;
sprot_id sp|O23403|PPD1_ARATH;
sprot_target db:uniprot_sprot|sp|O23403|PPD1_ARATH 1 178 evalue:1.3e-08 qcov:99.40 identity:28.60;
tm_num 1;
89379 89435 lipoprotein_signal_peptide
ID metaerg.pl|06643
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
89379 89918 transmembrane_helix
ID metaerg.pl|06644
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
topology i89397-89465o;
89931 90515 CDS
ID metaerg.pl|06645
allec_ids 3.6.1.9;
allgo_ids GO:0047429; GO:0005737; GO:0035529; GO:0009117;
allko_ids K06287;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106867564.1 3 194 evalue:3.9e-84 qcov:99.00 identity:77.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF02545;
pfam_desc Maf-like protein;
pfam_id Maf;
pfam_target db:Pfam-A.hmm|PF02545.14 evalue:1.1e-48 score:164.4 best_domain_score:164.3 name:Maf;
sprot_desc Nucleoside triphosphate pyrophosphatase;
sprot_id sp|Q3MEX6|NTPP_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MEX6|NTPP_ANAVT 4 194 evalue:1.7e-65 qcov:98.50 identity:63.50;
tigrfam_acc TIGR00172;
tigrfam_desc septum formation protein Maf;
tigrfam_mainrole Cellular processes;
tigrfam_name maf;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR00172 evalue:2.3e-55 score:186.1 best_domain_score:186.0 name:TIGR00172;
90866 91108 CDS
ID metaerg.pl|06646
allgo_ids GO:0005737; GO:0000036; GO:0031177;
allko_ids K01897; K01909; K03955; K05939; K01586; K02078;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035992991.1 1 80 evalue:8.7e-30 qcov:100.00 identity:92.50;
kegg_pathway_id 00564; 00190; 00300; 00071; 05012;
kegg_pathway_name Glycerophospholipid metabolism; Oxidative phosphorylation; Lysine biosynthesis; Fatty acid metabolism; Parkinson's disease;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF00550;
pfam_desc Phosphopantetheine attachment site;
pfam_id PP-binding;
pfam_target db:Pfam-A.hmm|PF00550.25 evalue:7.2e-18 score:64.0 best_domain_score:63.8 name:PP-binding;
sprot_desc Acyl carrier protein;
sprot_id sp|Q31QV1|ACP_SYNE7;
sprot_target db:uniprot_sprot|sp|Q31QV1|ACP_SYNE7 4 79 evalue:5.5e-23 qcov:95.00 identity:76.30;
tigrfam_acc TIGR00517;
tigrfam_desc acyl carrier protein;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name acyl_carrier;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00517 evalue:5.8e-36 score:121.4 best_domain_score:121.2 name:TIGR00517;
91274 92527 CDS
ID metaerg.pl|06647
allec_ids 2.3.1.179;
allgo_ids GO:0005829; GO:0004315; GO:0033817; GO:0006633;
allko_ids K09458;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106903381.1 1 417 evalue:5.1e-222 qcov:100.00 identity:92.30;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PWY-6113; PWY-6285; PWY-5973; PWYG-321;
metacyc_pathway_name superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; cis-vaccenate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Unsaturated-Fatty-Acids-Biosynthesis;; Fatty-acid-biosynthesis;;
pfam_acc PF00109; PF02801;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain;
pfam_id ketoacyl-synt; Ketoacyl-synt_C;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:3e-61 score:206.4 best_domain_score:206.0 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:4.4e-38 score:129.2 best_domain_score:127.9 name:Ketoacyl-synt_C;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] synthase 2;
sprot_id sp|P73283|FABF_SYNY3;
sprot_target db:uniprot_sprot|sp|P73283|FABF_SYNY3 1 416 evalue:4.4e-180 qcov:99.80 identity:75.50;
tigrfam_acc TIGR03150;
tigrfam_desc beta-ketoacyl-acyl-carrier-protein synthase II;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabF;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR03150 evalue:9.6e-194 score:642.8 best_domain_score:642.6 name:TIGR03150;
92760 94766 CDS
ID metaerg.pl|06648
allec_ids 2.2.1.1;
allgo_ids GO:0046872; GO:0004802;
allko_ids K00163; K00615;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035992986.1 1 667 evalue:0.0e+00 qcov:99.90 identity:94.00;
kegg_pathway_id 00620; 00252; 01051; 00650; 00030; 00010; 00710; 00290; 00020;
kegg_pathway_name Pyruvate metabolism; Alanine and aspartate metabolism; Biosynthesis of ansamycins; Butanoate metabolism; Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Valine, leucine and isoleucine biosynthesis; Citrate cycle (TCA cycle);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
metacyc_pathway_id PENTOSE-P-PWY; P21-PWY; CALVIN-PWY; PWY-5993; PHOTOALL-PWY; PWY-5723; PWY-1861; NONOXIPENT-PWY; P124-PWY; P185-PWY; PWY-5979;
metacyc_pathway_name pentose phosphate pathway;; pentose phosphate pathway (partial);; Calvin-Benson-Bassham cycle;; superpathway of rifamycin B biosynthesis;; oxygenic photosynthesis;; Rubisco shunt;; formaldehyde assimilation II (assimilatory RuMP Cycle);; pentose phosphate pathway (non-oxidative branch);; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; 3-amino-5-hydroxybenzoate biosynthesis;;
metacyc_pathway_type Pentose-Phosphate-Cycle; Super-Pathways;; Pentose-Phosphate-Cycle;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; Antibiotic-Biosynthesis; Super-Pathways;; Photosynthesis; Super-Pathways;; Energy-Metabolism;; Formaldehyde-Assimilation;; Pentose-Phosphate-Cycle;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; SECONDARY-METABOLITE-BIOSYNTHESIS;;
pfam_acc PF02780; PF00456; PF02779;
pfam_desc Transketolase, C-terminal domain; Transketolase, thiamine diphosphate binding domain; Transketolase, pyrimidine binding domain;
pfam_id Transketolase_C; Transketolase_N; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF02780.20 evalue:1.3e-12 score:46.9 best_domain_score:45.8 name:Transketolase_C; db:Pfam-A.hmm|PF00456.21 evalue:1e-156 score:520.3 best_domain_score:519.9 name:Transketolase_N; db:Pfam-A.hmm|PF02779.24 evalue:4.2e-47 score:159.4 best_domain_score:158.5 name:Transket_pyr;
sprot_desc Transketolase;
sprot_id sp|Q8YRU9|TKT_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YRU9|TKT_NOSS1 1 667 evalue:6.1e-309 qcov:99.90 identity:76.10;
tigrfam_acc TIGR00232;
tigrfam_desc transketolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tktlase_bact;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00232 evalue:2.5e-298 score:990.1 best_domain_score:989.9 name:TIGR00232;
96670 95009 CDS
ID metaerg.pl|06649
allec_ids 3.6.4.13;
allgo_ids GO:0009507; GO:0009570; GO:0010494; GO:0005524; GO:0003723; GO:0003724; GO:0009793; GO:0031047; GO:0000373; GO:0006397; GO:0010497; GO:0016441;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017302422.1 1 552 evalue:9.0e-267 qcov:99.80 identity:84.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 853.085; 14.2196; 298.409; 563.985; 1729.7;
pfam_acc PF08148; PF00271;
pfam_desc DSHCT (NUC185) domain; Helicase conserved C-terminal domain;
pfam_id DSHCT; Helicase_C;
pfam_target db:Pfam-A.hmm|PF08148.12 evalue:2.1e-41 score:140.6 best_domain_score:139.3 name:DSHCT; db:Pfam-A.hmm|PF00271.31 evalue:8.9e-06 score:25.3 best_domain_score:23.6 name:Helicase_C;
sprot_desc DExH-box ATP-dependent RNA helicase DExH15 chloroplastic;
sprot_id sp|B9DFG3|ISE2_ARATH;
sprot_target db:uniprot_sprot|sp|B9DFG3|ISE2_ARATH 1 550 evalue:3.3e-66 qcov:99.50 identity:31.80;
>Feature NODE_42_length_95617_cov_18.2735
904 74 CDS
ID metaerg.pl|06650
allec_ids 2.8.3.6;
allgo_ids GO:0008410; GO:0047569; GO:0042952;
allko_ids K01039;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668709.1 1 268 evalue:9.1e-127 qcov:97.10 identity:81.30;
kegg_pathway_id 00650; 00643;
kegg_pathway_name Butanoate metabolism; Styrene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-5183; PWY-5431; PWY-5181; PWY-6185; PWY-6182; PWY-2504; PWY-5417; PWY-2361;
metacyc_pathway_name superpathway of aerobic toluene degradation;; aromatic compounds degradation via β-ketoadipate;; toluene degradation III (aerobic) (via p-cresol);; 4-methylcatechol degradation (ortho cleavage);; superpathway of salicylate degradation;; superpathway of aromatic compound degradation via 3-oxoadipate;; catechol degradation III (ortho-cleavage pathway);; 3-oxoadipate degradation;;
metacyc_pathway_type Super-Pathways; TOLUENE-DEG;; Catechol-Degradation; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Catechol-Degradation; Super-Pathways;; CARBOXYLATES-DEG;;
pfam_acc PF01144;
pfam_desc Coenzyme A transferase;
pfam_id CoA_trans;
pfam_target db:Pfam-A.hmm|PF01144.23 evalue:3.1e-27 score:94.6 best_domain_score:94.3 name:CoA_trans;
sprot_desc 3-oxoadipate CoA-transferase subunit A;
sprot_id sp|Q8VPF3|CATI_PSEKB;
sprot_target db:uniprot_sprot|sp|Q8VPF3|CATI_PSEKB 1 266 evalue:9.6e-107 qcov:96.40 identity:70.30;
1629 1231 CDS
ID metaerg.pl|06651
allec_ids 4.1.1.44;
allgo_ids GO:0051920; GO:0055114; GO:0047575; GO:0042952;
allko_ids K01607;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442314.1 11 128 evalue:6.7e-43 qcov:89.40 identity:78.30;
kegg_pathway_id 00362;
kegg_pathway_name Benzoate degradation via hydroxylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-5431; PWY-5181; PWY-2504; PWY-5183; PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY;
metacyc_pathway_name aromatic compounds degradation via β-ketoadipate;; toluene degradation III (aerobic) (via p-cresol);; superpathway of aromatic compound degradation via 3-oxoadipate;; superpathway of aerobic toluene degradation;; protocatechuate degradation II (ortho-cleavage pathway);;
metacyc_pathway_type Catechol-Degradation; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Protocatechuate-Degradation;;
pfam_acc PF02627;
pfam_desc Carboxymuconolactone decarboxylase family;
pfam_id CMD;
pfam_target db:Pfam-A.hmm|PF02627.20 evalue:2.7e-23 score:81.0 best_domain_score:80.6 name:CMD;
sprot_desc 4-carboxymuconolactone decarboxylase;
sprot_id sp|P20370|DC4C_ACIAD;
sprot_target db:uniprot_sprot|sp|P20370|DC4C_ACIAD 2 121 evalue:9.8e-25 qcov:90.90 identity:46.70;
tigrfam_acc TIGR02425;
tigrfam_desc 4-carboxymuconolactone decarboxylase;
tigrfam_mainrole Energy metabolism;
tigrfam_name decarb_PcaC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02425 evalue:2.5e-47 score:159.2 best_domain_score:158.9 name:TIGR02425;
2202 3257 CDS
ID metaerg.pl|06652
allec_ids 1.4.3.3;
allgo_ids GO:0016491; GO:0055114; GO:0003884; GO:0071949; GO:0046416;
allko_ids K00273;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442201.1 21 333 evalue:7.5e-126 qcov:89.20 identity:69.60;
kegg_pathway_id 00330; 00260; 00472;
kegg_pathway_name Arginine and proline metabolism; Glycine, serine and threonine metabolism; D-Arginine and D-ornithine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF01266; PF00890;
pfam_desc FAD dependent oxidoreductase; FAD binding domain;
pfam_id DAO; FAD_binding_2;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:2.2e-31 score:108.9 best_domain_score:108.4 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:3.3e-06 score:25.7 best_domain_score:25.1 name:FAD_binding_2;
sprot_desc Probable D-amino-acid oxidase;
sprot_id sp|P9WP26|DAO_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WP26|DAO_MYCTO 20 330 evalue:4.5e-53 qcov:88.60 identity:37.90;
3843 3352 CDS
ID metaerg.pl|06653
allec_ids 1.11.1.15;
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005737; GO:0008379; GO:0045454; GO:0034599;
allko_ids K03564; K11188; K13279; K11065; K00430; K11186; K03386; K11185;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669304.1 2 154 evalue:9.7e-44 qcov:93.90 identity:57.50;
kegg_pathway_id 00480; 00680; 00940; 00360;
kegg_pathway_name Glutathione metabolism; Methane metabolism; Phenylpropanoid biosynthesis; Phenylalanine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:2.6e-33 score:113.8 best_domain_score:113.6 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:6.2e-23 score:80.4 best_domain_score:80.2 name:Redoxin;
sprot_desc Putative peroxiredoxin bcp;
sprot_id sp|Q83CY8|BCP_COXBU;
sprot_target db:uniprot_sprot|sp|Q83CY8|BCP_COXBU 2 151 evalue:4.3e-30 qcov:92.00 identity:40.70;
5086 4073 CDS
ID metaerg.pl|06654
allec_ids 1.1.1.95;
allgo_ids GO:0016616; GO:0051287; GO:0055114; GO:0004617; GO:0006520; GO:0006564;
allko_ids K00058; K00018; K00122;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus sp900104025;
genomedb_acc GCF_900104025.1;
genomedb_target db:genomedb|GCF_900104025.1|WP_091374377.1 6 336 evalue:9.2e-89 qcov:98.20 identity:53.40;
kegg_pathway_id 00630; 00260; 00680;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Glycine, serine and threonine metabolism; Methane metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id SULFATE-CYS-PWY; SER-GLYSYN-PWY; SERSYN-PWY;
metacyc_pathway_name superpathway of sulfate assimilation and cysteine biosynthesis;; superpathway of L-serine and glycine biosynthesis I;; L-serine biosynthesis I;;
metacyc_pathway_type Sulfur-Metabolism; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; SERINE-BIOSYNTHESIS;;
pfam_acc PF00389; PF02826;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain;
pfam_id 2-Hacid_dh; 2-Hacid_dh_C;
pfam_target db:Pfam-A.hmm|PF00389.30 evalue:1.2e-22 score:79.2 best_domain_score:79.1 name:2-Hacid_dh; db:Pfam-A.hmm|PF02826.19 evalue:3.9e-57 score:191.7 best_domain_score:190.8 name:2-Hacid_dh_C;
sprot_desc D-3-phosphoglycerate dehydrogenase;
sprot_id sp|Q58424|SERA_METJA;
sprot_target db:uniprot_sprot|sp|Q58424|SERA_METJA 53 329 evalue:4.1e-43 qcov:82.20 identity:38.80;
5424 5083 CDS
ID metaerg.pl|06655
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
6607 5456 CDS
ID metaerg.pl|06656
allec_ids 1.3.1.95;
allgo_ids GO:0016627; GO:0055114; GO:0005737; GO:0003995; GO:0071949; GO:0016628;
allko_ids K08098; K11538; K11731; K00249; K14448; K00252; K00232; K00120; K09478; K00248; K11410; K00253; K06446; K20143;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora;s__Spirillospora chibensis;
genomedb_acc GCF_001552135.1;
genomedb_target db:genomedb|GCF_001552135.1|WP_067887618.1 1 378 evalue:3.4e-148 qcov:98.70 identity:68.50;
kegg_pathway_id 00903; 01040; 00592; 00640; 00650; 00380; 00632; 00361; 00410; 00071; 00626; 01031; 00280; 00310; 00624; 00930;
kegg_pathway_name Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; alpha-Linolenic acid metabolism; Propanoate metabolism; Butanoate metabolism; Tryptophan metabolism; Benzoate degradation via CoA ligation; gamma-Hexachlorocyclohexane degradation; beta-Alanine metabolism; Fatty acid metabolism; Naphthalene and anthracene degradation; Glycan structures - biosynthesis 2; Valine, leucine and isoleucine degradation; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Caprolactam degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:1.1e-40 score:138.5 best_domain_score:137.6 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:5.4e-16 score:58.3 best_domain_score:57.3 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:1.7e-15 score:56.2 best_domain_score:55.3 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:1.2e-20 score:73.5 best_domain_score:72.4 name:Acyl-CoA_dh_N;
sprot_desc Acryloyl-CoA reductase (NADH);
sprot_id sp|G3KIM8|ACRC_CLOPR;
sprot_target db:uniprot_sprot|sp|G3KIM8|ACRC_CLOPR 1 369 evalue:3.7e-48 qcov:96.30 identity:36.10;
8701 6611 CDS
ID metaerg.pl|06657
allgo_ids GO:0048037;
allko_ids K01905;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus sp900104025;
genomedb_acc GCF_900104025.1;
genomedb_target db:genomedb|GCF_900104025.1|WP_091373785.1 1 685 evalue:9.7e-210 qcov:98.40 identity:59.10;
kegg_pathway_id 00640; 00620;
kegg_pathway_name Propanoate metabolism; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF13549; PF13380; PF13607;
pfam_desc ATP-grasp domain; CoA binding domain; Succinyl-CoA ligase like flavodoxin domain;
pfam_id ATP-grasp_5; CoA_binding_2; Succ_CoA_lig;
pfam_target db:Pfam-A.hmm|PF13549.6 evalue:1.1e-45 score:155.1 best_domain_score:154.2 name:ATP-grasp_5; db:Pfam-A.hmm|PF13380.6 evalue:1.7e-19 score:69.7 best_domain_score:67.5 name:CoA_binding_2; db:Pfam-A.hmm|PF13607.6 evalue:3e-39 score:133.2 best_domain_score:130.6 name:Succ_CoA_lig;
8831 9562 CDS
ID metaerg.pl|06658
allec_ids 4.2.1.150;
allgo_ids GO:0003824; GO:0016829; GO:0019605;
allko_ids K07515; K01825; K10527; K07511; K07514; K13816; K15016; K13767; K00022; K01692; K07516; K01782; K01715;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus sp900104025;
genomedb_acc GCF_900104025.1;
genomedb_target db:genomedb|GCF_900104025.1|WP_091373788.1 3 243 evalue:2.7e-74 qcov:99.20 identity:61.00;
kegg_pathway_id 00592; 00410; 00071; 00640; 00650; 00903; 00062; 01040; 00380; 00632; 00930; 00280; 00281; 00310;
kegg_pathway_name alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Propanoate metabolism; Butanoate metabolism; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids; Tryptophan metabolism; Benzoate degradation via CoA ligation; Caprolactam degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:2.3e-39 score:134.5 best_domain_score:134.3 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:5.3e-29 score:101.0 best_domain_score:100.7 name:ECH_2;
sprot_desc Short-chain-enoyl-CoA hydratase;
sprot_id sp|P52046|CRT_CLOAB;
sprot_target db:uniprot_sprot|sp|P52046|CRT_CLOAB 16 243 evalue:8.3e-30 qcov:93.80 identity:34.70;
9841 10149 CDS
ID metaerg.pl|06659
allgo_ids GO:0003700; GO:0006355;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF13463; PF01047;
pfam_desc Winged helix DNA-binding domain; MarR family;
pfam_id HTH_27; MarR;
pfam_target db:Pfam-A.hmm|PF13463.6 evalue:2.7e-06 score:27.0 best_domain_score:26.4 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:1e-06 score:27.8 best_domain_score:26.6 name:MarR;
11914 10169 CDS
ID metaerg.pl|06660
allec_ids 2.3.2.2;
allgo_ids GO:0036374; GO:0102953; GO:0103068; GO:0006751;
allko_ids K00681;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Streptosporangium;s__Streptosporangium subroseum;
genomedb_acc GCF_900188345.1;
genomedb_target db:genomedb|GCF_900188345.1|WP_089205106.1 1 581 evalue:7.1e-206 qcov:100.00 identity:61.60;
kegg_pathway_id 00430; 00460; 00590; 00450; 00480;
kegg_pathway_name Taurine and hypotaurine metabolism; Cyanoamino acid metabolism; Arachidonic acid metabolism; Selenoamino acid metabolism; Glutathione metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-5826; PWY-4041;
metacyc_pathway_name hypoglycin biosynthesis;; γ-glutamyl cycle;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; Reductants; Super-Pathways;;
pfam_acc PF01019;
pfam_desc Gamma-glutamyltranspeptidase;
pfam_id G_glu_transpept;
pfam_target db:Pfam-A.hmm|PF01019.21 evalue:2e-122 score:408.8 best_domain_score:408.6 name:G_glu_transpept;
sprot_desc Glutathione hydrolase-like YwrD proenzyme;
sprot_id sp|O05218|YWRD_BACSU;
sprot_target db:uniprot_sprot|sp|O05218|YWRD_BACSU 1 573 evalue:2.1e-55 qcov:98.60 identity:29.70;
13213 12140 CDS
ID metaerg.pl|06661
allec_ids 1.1.1.337;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0102443; GO:0019295;
allko_ids K00016; K05884;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces milbemycinicus;
genomedb_acc GCF_002154605.1;
genomedb_target db:genomedb|GCF_002154605.1|WP_014179784.1 12 347 evalue:3.6e-107 qcov:94.10 identity:58.90;
kegg_pathway_id 00010; 00620; 00640; 00272;
kegg_pathway_name Glycolysis / Gluconeogenesis; Pyruvate metabolism; Propanoate metabolism; Cysteine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF02615;
pfam_desc Malate/L-lactate dehydrogenase;
pfam_id Ldh_2;
pfam_target db:Pfam-A.hmm|PF02615.14 evalue:2.8e-116 score:387.5 best_domain_score:387.4 name:Ldh_2;
sprot_desc L-sulfolactate dehydrogenase;
sprot_id sp|O27273|COMC_METTH;
sprot_target db:uniprot_sprot|sp|O27273|COMC_METTH 7 347 evalue:4.3e-59 qcov:95.50 identity:37.00;
15921 13210 CDS
ID metaerg.pl|06662
allec_ids 4.2.1.3;
allgo_ids GO:0005618; GO:0005829; GO:0005576; GO:0005886; GO:0047456; GO:0051539; GO:0003994; GO:0030350; GO:0046872; GO:0003730; GO:0003729; GO:0006101; GO:0019679; GO:0010039; GO:0006099;
allko_ids K01704; K01705; K01681; K01702; K01682; K01703;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Stackebrandtia;s__Stackebrandtia nassauensis;
genomedb_acc GCF_000024545.1;
genomedb_target db:genomedb|GCF_000024545.1|WP_013018275.1 10 893 evalue:2.9e-307 qcov:97.90 identity:59.60;
kegg_pathway_id 00720; 00290; 00020; 00300; 00630;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Valine, leucine and isoleucine biosynthesis; Citrate cycle (TCA cycle); Lysine biosynthesis; Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id TCA; PWY-5750; PWY-5913; PWY-5690; P105-PWY; PWY-6549; TCA-GLYOX-BYPASS; ANARESP1-PWY; PWY-561; PWY-5392; REDCITCYC; P23-PWY; PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; FERMENTATION-PWY; GLYOXYLATE-BYPASS;
metacyc_pathway_name TCA cycle I (prokaryotic);; itaconate biosynthesis I;; partial TCA cycle (obligate autotrophs);; TCA cycle II (plants and fungi);; TCA cycle IV (2-oxoglutarate decarboxylase);; L-glutamine biosynthesis III;; superpathway of glyoxylate bypass and TCA;; ; superpathway of glyoxylate cycle and fatty acid degradation;; reductive TCA cycle II;; TCA cycle VIII (Helicobacter);; reductive TCA cycle I;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; mixed acid fermentation;; glyoxylate cycle;;
metacyc_pathway_type TCA-VARIANTS;; Itaconate-Biosynthesis;; TCA-VARIANTS;; TCA-VARIANTS;; TCA-VARIANTS;; GLUTAMINE-SYN;; Super-Pathways; TCA-VARIANTS;; ; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; TCA-VARIANTS;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism;;
pfam_acc PF00330; PF00694;
pfam_desc Aconitase family (aconitate hydratase); Aconitase C-terminal domain;
pfam_id Aconitase; Aconitase_C;
pfam_target db:Pfam-A.hmm|PF00330.20 evalue:3.6e-164 score:546.4 best_domain_score:546.0 name:Aconitase; db:Pfam-A.hmm|PF00694.19 evalue:1.1e-37 score:128.5 best_domain_score:128.0 name:Aconitase_C;
sprot_desc Aconitate hydratase A;
sprot_id sp|O53166|ACNA_MYCTU;
sprot_target db:uniprot_sprot|sp|O53166|ACNA_MYCTU 10 892 evalue:9.6e-289 qcov:97.80 identity:55.20;
tigrfam_acc TIGR01341;
tigrfam_desc aconitate hydratase 1;
tigrfam_mainrole Energy metabolism;
tigrfam_name aconitase_1;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01341 evalue:0 score:1120.9 best_domain_score:1120.7 name:TIGR01341;
16036 16803 CDS
ID metaerg.pl|06663
allgo_ids GO:0003824; GO:0046872;
allko_ids K01555;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Nonomuraea;s__Nonomuraea solani;
genomedb_acc GCF_900108335.1;
genomedb_target db:genomedb|GCF_900108335.1|WP_103954361.1 1 253 evalue:8.8e-92 qcov:99.20 identity:65.00;
kegg_pathway_id 00643; 00350;
kegg_pathway_name Styrene degradation; Tyrosine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF10370; PF01557;
pfam_desc Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family;
pfam_id DUF2437; FAA_hydrolase;
pfam_target db:Pfam-A.hmm|PF10370.9 evalue:6.5e-10 score:39.0 best_domain_score:38.0 name:DUF2437; db:Pfam-A.hmm|PF01557.18 evalue:2.3e-62 score:209.8 best_domain_score:209.4 name:FAA_hydrolase;
sprot_desc hypothetical protein;
sprot_id sp|Q59050|Y1656_METJA;
sprot_target db:uniprot_sprot|sp|Q59050|Y1656_METJA 31 251 evalue:5.1e-54 qcov:86.70 identity:44.30;
16846 18453 CDS
ID metaerg.pl|06664
allgo_ids GO:0005887; GO:0015129; GO:0015727; GO:0005886; GO:0015295;
allko_ids K00427;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW14057.1 9 532 evalue:5.3e-131 qcov:97.90 identity:50.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF02652;
pfam_desc L-lactate permease;
pfam_id Lactate_perm;
pfam_target db:Pfam-A.hmm|PF02652.14 evalue:1.3e-59 score:201.6 best_domain_score:200.9 name:Lactate_perm;
sprot_desc L-lactate permease;
sprot_id sp|Q8ZL63|LLDP_SALTY;
sprot_target db:uniprot_sprot|sp|Q8ZL63|LLDP_SALTY 8 533 evalue:6.5e-19 qcov:98.30 identity:25.70;
tm_num 12;
16846 18453 transmembrane_helix
ID metaerg.pl|06665
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
topology o16873-16941i16960-17028o17041-17109i17170-17238o17398-17466i17503-17562o17572-17631i17722-17781o17881-17949i18007-18075o18118-18186i18376-18444o;
19186 18494 CDS
ID metaerg.pl|06666
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Arthrobacter_C;s__Arthrobacter_C castelli;
genomedb_acc GCF_000430705.1;
genomedb_target db:genomedb|GCF_000430705.1|WP_026818190.1 10 215 evalue:1.8e-64 qcov:89.60 identity:62.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:1.1e-25 score:89.7 best_domain_score:89.0 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:3.2e-17 score:61.2 best_domain_score:60.4 name:GntR;
20734 19214 CDS
ID metaerg.pl|06667
allgo_ids GO:0016491; GO:0055114;
allko_ids K00278; K00244;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Jiangella;s__Jiangella alkaliphila;
genomedb_acc GCF_900105925.1;
genomedb_target db:genomedb|GCF_900105925.1|WP_046769681.1 23 506 evalue:3.1e-197 qcov:95.70 identity:69.10;
kegg_pathway_id 00190; 00650; 00252; 02020; 00760; 00632; 00020; 00720;
kegg_pathway_name Oxidative phosphorylation; Butanoate metabolism; Alanine and aspartate metabolism; Two-component system - General; Nicotinate and nicotinamide metabolism; Benzoate degradation via CoA ligation; Citrate cycle (TCA cycle); Reductive carboxylate cycle (CO2 fixation);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF01266; PF00890; PF12831;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; FAD dependent oxidoreductase;
pfam_id DAO; FAD_binding_2; FAD_oxidored;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:6.7e-09 score:35.0 best_domain_score:33.8 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.9e-49 score:168.1 best_domain_score:166.9 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:1.3e-09 score:37.2 best_domain_score:31.9 name:FAD_oxidored;
21530 20751 CDS
ID metaerg.pl|06668
allec_ids 4.2.1.116;
allgo_ids GO:0003824; GO:0043956; GO:0006631;
allko_ids K15016; K13767; K00022; K01692; K01782; K07516; K07515; K10527; K01825; K07514; K15019;
genomedb_OC d__Bacteria;p__Myxococcota;c__UBA9160;o__UBA9160;f__UBA6930;g__GCA-2687015;s__GCA-2687015 sp002687015;
genomedb_acc GCA_002687015.1;
genomedb_target db:genomedb|GCA_002687015.1|MAE93415.1 5 259 evalue:4.3e-70 qcov:98.50 identity:58.00;
kegg_pathway_id 00592; 00410; 00071; 00650; 00640; 00062; 00903; 01040; 00380; 00930; 00632; 00280; 00281; 00310;
kegg_pathway_name alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Butanoate metabolism; Propanoate metabolism; Fatty acid elongation in mitochondria; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-5789; PWY-4221; PWY-5743; PWY-3941;
metacyc_pathway_name 3-hydroxypropanoate/4-hydroxybutanate cycle;; superpathway of coenzyme A biosynthesis II (plants);; 3-hydroxypropanoate cycle;; β-alanine biosynthesis II;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; CoA-Biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;; Beta-Alanine-Biosynthesis;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:1.2e-47 score:161.6 best_domain_score:161.5 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:3.7e-21 score:75.2 best_domain_score:66.0 name:ECH_2;
sprot_desc 3-hydroxypropionyl-coenzyme A dehydratase;
sprot_id sp|A4YI89|HPCD_METS5;
sprot_target db:uniprot_sprot|sp|A4YI89|HPCD_METS5 12 259 evalue:5.0e-25 qcov:95.80 identity:31.10;
23854 21527 CDS
ID metaerg.pl|06669
allgo_ids GO:0003824;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Frankiales;f__Frankiaceae;g__Frankia;s__Frankia sp001854805;
genomedb_acc GCF_001854805.1;
genomedb_target db:genomedb|GCF_001854805.1|WP_071051231.1 6 749 evalue:1.4e-185 qcov:96.00 identity:48.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF02515;
pfam_desc CoA-transferase family III;
pfam_id CoA_transf_3;
pfam_target db:Pfam-A.hmm|PF02515.17 evalue:7.1e-138 score:458.9 best_domain_score:250.2 name:CoA_transf_3;
24240 23851 CDS
ID metaerg.pl|06670
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
24479 25435 CDS
ID metaerg.pl|06671
allec_ids 4.1.3.32;
allgo_ids GO:0004451; GO:0019752; GO:0047529; GO:0046872; GO:0051187;
allko_ids K20454;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora;s__Spirillospora latina;
genomedb_acc GCF_001552195.1;
genomedb_target db:genomedb|GCF_001552195.1|WP_067634245.1 42 318 evalue:7.1e-75 qcov:87.10 identity:52.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-5062;
metacyc_pathway_name superpathway of nicotinate degradation;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;;
pfam_acc PF00463; PF13714;
pfam_desc Isocitrate lyase family; Phosphoenolpyruvate phosphomutase;
pfam_id ICL; PEP_mutase;
pfam_target db:Pfam-A.hmm|PF00463.21 evalue:2.4e-11 score:42.1 best_domain_score:41.6 name:ICL; db:Pfam-A.hmm|PF13714.6 evalue:2.7e-44 score:150.6 best_domain_score:150.3 name:PEP_mutase;
sprot_desc 2,3-dimethylmalate lyase;
sprot_id sp|Q0QLE4|DML_EUBBA;
sprot_target db:uniprot_sprot|sp|Q0QLE4|DML_EUBBA 31 309 evalue:6.6e-51 qcov:87.70 identity:37.10;
26918 25488 CDS
ID metaerg.pl|06672
allec_ids 4.1.1.6;
allgo_ids GO:0016829; GO:0005739; GO:0047547; GO:0047613; GO:0035458; GO:0071346; GO:0071347; GO:0071222; GO:0071219; GO:0071393; GO:0071356; GO:0006952; GO:0007566; GO:0006954; GO:0050728; GO:0045824; GO:0032088; GO:0034136; GO:0034144; GO:0032480; GO:0002760; GO:2000379; GO:0019679; GO:0072573;
allko_ids K17724;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108667221.1 6 447 evalue:6.7e-170 qcov:92.90 identity:69.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-5750;
metacyc_pathway_name itaconate biosynthesis I;;
metacyc_pathway_type Itaconate-Biosynthesis;;
pfam_acc PF03972;
pfam_desc MmgE/PrpD family;
pfam_id MmgE_PrpD;
pfam_target db:Pfam-A.hmm|PF03972.14 evalue:2.1e-112 score:375.1 best_domain_score:374.8 name:MmgE_PrpD;
sprot_desc Cis-aconitate decarboxylase;
sprot_id sp|A6NK06|IRG1_HUMAN;
sprot_target db:uniprot_sprot|sp|A6NK06|IRG1_HUMAN 32 454 evalue:1.0e-23 qcov:88.90 identity:29.60;
27741 26911 CDS
ID metaerg.pl|06673
allgo_ids GO:0004061; GO:0019441;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108667220.1 11 268 evalue:2.6e-105 qcov:93.50 identity:71.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF04199;
pfam_desc Putative cyclase;
pfam_id Cyclase;
pfam_target db:Pfam-A.hmm|PF04199.13 evalue:1.7e-28 score:98.8 best_domain_score:98.4 name:Cyclase;
28646 27744 CDS
ID metaerg.pl|06674
allec_ids 4.1.3.6;
allgo_ids GO:0003824; GO:0009346; GO:0008815; GO:0008816; GO:0046872; GO:0006084;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108667219.1 8 299 evalue:2.6e-66 qcov:97.30 identity:52.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF15617; PF03328;
pfam_desc C-C_Bond_Lyase of the TIM-Barrel fold; HpcH/HpaI aldolase/citrate lyase family;
pfam_id C-C_Bond_Lyase; HpcH_HpaI;
pfam_target db:Pfam-A.hmm|PF15617.6 evalue:4.2e-14 score:51.7 best_domain_score:28.9 name:C-C_Bond_Lyase; db:Pfam-A.hmm|PF03328.14 evalue:1.6e-44 score:150.9 best_domain_score:149.3 name:HpcH_HpaI;
sprot_desc Citrate lyase subunit beta;
sprot_id sp|O53078|CITE_LEUMC;
sprot_target db:uniprot_sprot|sp|O53078|CITE_LEUMC 7 300 evalue:2.9e-40 qcov:98.00 identity:33.60;
29946 28633 CDS
ID metaerg.pl|06675
allec_ids 2.8.3.20;
allgo_ids GO:0003824; GO:0008410; GO:0043961; GO:0043427;
allko_ids K14472; K18313;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108667218.1 49 436 evalue:5.6e-179 qcov:88.80 identity:78.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF02515;
pfam_desc CoA-transferase family III;
pfam_id CoA_transf_3;
pfam_target db:Pfam-A.hmm|PF02515.17 evalue:2.4e-116 score:388.1 best_domain_score:387.8 name:CoA_transf_3;
sprot_desc Succinyl-CoA--D-citramalate CoA-transferase;
sprot_id sp|A9WGE3|SCCT_CHLAA;
sprot_target db:uniprot_sprot|sp|A9WGE3|SCCT_CHLAA 40 436 evalue:5.6e-85 qcov:90.80 identity:41.50;
30182 31357 CDS
ID metaerg.pl|06676
allec_ids 5.3.2.8;
allgo_ids GO:0016863; GO:0019396;
allko_ids K16514;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp002300165;
genomedb_acc GCF_002300165.1;
genomedb_target db:genomedb|GCF_002300165.1|WP_095932274.1 7 360 evalue:1.8e-112 qcov:90.50 identity:61.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF04303;
pfam_desc PrpF protein;
pfam_id PrpF;
pfam_target db:Pfam-A.hmm|PF04303.13 evalue:3.9e-100 score:334.6 best_domain_score:334.3 name:PrpF;
sprot_desc 4-oxalomesaconate tautomerase;
sprot_id sp|Q88JY0|GALD_PSEPK;
sprot_target db:uniprot_sprot|sp|Q88JY0|GALD_PSEPK 9 354 evalue:9.1e-103 qcov:88.50 identity:55.90;
31442 32227 CDS
ID metaerg.pl|06677
allec_ids 3.1.1.24;
allgo_ids GO:0047570; GO:0042952;
allko_ids K01259; K01055;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Murinocardiopsis;s__Murinocardiopsis flavida;
genomedb_acc GCF_003014485.1;
genomedb_target db:genomedb|GCF_003014485.1|WP_106582203.1 9 259 evalue:2.8e-61 qcov:96.20 identity:50.00;
kegg_pathway_id 00362; 00330;
kegg_pathway_name Benzoate degradation via hydroxylation; Arginine and proline metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-2504; PWY-6182; PWY-6185; CATECHOL-ORTHO-CLEAVAGE-PWY; PWY-5417; PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY; PWY-5183; PWY-5181; PWY-5431;
metacyc_pathway_name superpathway of aromatic compound degradation via 3-oxoadipate;; superpathway of salicylate degradation;; 4-methylcatechol degradation (ortho cleavage);; catechol degradation to β-ketoadipate;; catechol degradation III (ortho-cleavage pathway);; protocatechuate degradation II (ortho-cleavage pathway);; superpathway of aerobic toluene degradation;; toluene degradation III (aerobic) (via p-cresol);; aromatic compounds degradation via β-ketoadipate;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; Catechol-Degradation;; Catechol-Degradation; Super-Pathways;; Protocatechuate-Degradation;; Super-Pathways; TOLUENE-DEG;; Super-Pathways; TOLUENE-DEG;; Catechol-Degradation; Super-Pathways;;
pfam_acc PF00561; PF08386; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; TAP-like protein; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_4; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:3.8e-29 score:101.3 best_domain_score:70.2 name:Abhydrolase_1; db:Pfam-A.hmm|PF08386.10 evalue:0.00013 score:21.3 best_domain_score:19.5 name:Abhydrolase_4; db:Pfam-A.hmm|PF12697.7 evalue:5.5e-21 score:75.4 best_domain_score:75.2 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:4.4e-14 score:51.6 best_domain_score:32.9 name:Hydrolase_4;
sprot_desc 3-oxoadipate enol-lactonase 2;
sprot_id sp|P00632|ELH2_ACIAD;
sprot_target db:uniprot_sprot|sp|P00632|ELH2_ACIAD 9 254 evalue:7.1e-43 qcov:94.30 identity:37.70;
32438 32842 CDS
ID metaerg.pl|06678
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus aggregatus;
genomedb_acc GCF_900221005.1;
genomedb_target db:genomedb|GCF_900221005.1|WP_097195514.1 6 133 evalue:2.0e-23 qcov:95.50 identity:48.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:4.1e-12 score:46.0 best_domain_score:45.8 name:Usp;
32908 35685 CDS
ID metaerg.pl|06679
allec_ids 4.2.1.3;
allgo_ids GO:0047456; GO:0051539; GO:0003994; GO:0046872; GO:0003730; GO:0003729; GO:0006099;
allko_ids K01703; K01682; K01702; K01681; K01705; K01704;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae_A;g__Streptomyces_F;s__Streptomyces_F thermoautotrophicus;
genomedb_acc GCF_001543895.1;
genomedb_target db:genomedb|GCF_001543895.1|WP_067070870.1 1 920 evalue:0.0e+00 qcov:99.50 identity:65.10;
kegg_pathway_id 00720; 00290; 00300; 00020; 00630;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Valine, leucine and isoleucine biosynthesis; Lysine biosynthesis; Citrate cycle (TCA cycle); Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id TCA-GLYOX-BYPASS; ANARESP1-PWY; P105-PWY; PWY-5690; PWY-6549; PWY-5913; PWY-5750; TCA; GLYOXYLATE-BYPASS; FERMENTATION-PWY; PWY-5464; P23-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5392; REDCITCYC; PWY-561;
metacyc_pathway_name superpathway of glyoxylate bypass and TCA;; ; TCA cycle IV (2-oxoglutarate decarboxylase);; TCA cycle II (plants and fungi);; L-glutamine biosynthesis III;; partial TCA cycle (obligate autotrophs);; itaconate biosynthesis I;; TCA cycle I (prokaryotic);; glyoxylate cycle;; mixed acid fermentation;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; reductive TCA cycle I;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; reductive TCA cycle II;; TCA cycle VIII (Helicobacter);; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Super-Pathways; TCA-VARIANTS;; ; TCA-VARIANTS;; TCA-VARIANTS;; GLUTAMINE-SYN;; TCA-VARIANTS;; Itaconate-Biosynthesis;; TCA-VARIANTS;; Energy-Metabolism;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00330; PF00694;
pfam_desc Aconitase family (aconitate hydratase); Aconitase C-terminal domain;
pfam_id Aconitase; Aconitase_C;
pfam_target db:Pfam-A.hmm|PF00330.20 evalue:1.7e-173 score:577.1 best_domain_score:576.6 name:Aconitase; db:Pfam-A.hmm|PF00694.19 evalue:1.4e-43 score:147.6 best_domain_score:146.7 name:Aconitase_C;
sprot_desc Aconitate hydratase A;
sprot_id sp|A0QX20|ACNA_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QX20|ACNA_MYCS2 4 920 evalue:0.0e+00 qcov:99.10 identity:60.60;
tigrfam_acc TIGR01341;
tigrfam_desc aconitate hydratase 1;
tigrfam_mainrole Energy metabolism;
tigrfam_name aconitase_1;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01341 evalue:0 score:1249.3 best_domain_score:715.2 name:TIGR01341;
35770 36786 CDS
ID metaerg.pl|06680
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__SG8-41;g__PALSA-1004;s__PALSA-1004 sp003153455;
genomedb_acc GCA_003153455.1;
genomedb_target db:genomedb|GCA_003153455.1|PLYS01000413.1_5 6 329 evalue:1.2e-35 qcov:95.90 identity:32.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF02423; PF01488;
pfam_desc Ornithine cyclodeaminase/mu-crystallin family; Shikimate / quinate 5-dehydrogenase;
pfam_id OCD_Mu_crystall; Shikimate_DH;
pfam_target db:Pfam-A.hmm|PF02423.15 evalue:1.9e-40 score:138.0 best_domain_score:137.7 name:OCD_Mu_crystall; db:Pfam-A.hmm|PF01488.20 evalue:1.3e-05 score:24.5 best_domain_score:22.3 name:Shikimate_DH;
38243 36705 CDS
ID metaerg.pl|06681
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Saccharopolyspora;s__Saccharopolyspora shandongensis;
genomedb_acc GCF_900106995.1;
genomedb_target db:genomedb|GCF_900106995.1|WP_093270149.1 9 482 evalue:9.7e-90 qcov:92.60 identity:45.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF17042; PF07005;
pfam_desc Nucleotide-binding C-terminal domain; Sugar-binding N-terminal domain;
pfam_id NBD_C; SBD_N;
pfam_target db:Pfam-A.hmm|PF17042.5 evalue:1.7e-34 score:119.0 best_domain_score:117.9 name:NBD_C; db:Pfam-A.hmm|PF07005.11 evalue:2.6e-47 score:160.7 best_domain_score:160.7 name:SBD_N;
39268 38240 CDS
ID metaerg.pl|06682
allec_ids 1.1.1.95;
allgo_ids GO:0016616; GO:0051287; GO:0055114; GO:0004617; GO:0006520; GO:0006564;
allko_ids K00058; K00018;
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Syntrophia;o__Syntrophales;f__UBA6109;g__UBA6109;s__UBA6109 sp002428445;
genomedb_acc GCA_002428445.1;
genomedb_target db:genomedb|GCA_002428445.1|DIWJ01000019.1_4 1 341 evalue:3.7e-69 qcov:99.70 identity:44.10;
kegg_pathway_id 00260; 00630;
kegg_pathway_name Glycine, serine and threonine metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id SERSYN-PWY; SER-GLYSYN-PWY; SULFATE-CYS-PWY;
metacyc_pathway_name L-serine biosynthesis I;; superpathway of L-serine and glycine biosynthesis I;; superpathway of sulfate assimilation and cysteine biosynthesis;;
metacyc_pathway_type SERINE-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Sulfur-Metabolism; Super-Pathways;;
pfam_acc PF00389; PF02826;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain;
pfam_id 2-Hacid_dh; 2-Hacid_dh_C;
pfam_target db:Pfam-A.hmm|PF00389.30 evalue:1.1e-09 score:37.3 best_domain_score:35.2 name:2-Hacid_dh; db:Pfam-A.hmm|PF02826.19 evalue:8.4e-55 score:184.1 best_domain_score:183.7 name:2-Hacid_dh_C;
sprot_desc D-3-phosphoglycerate dehydrogenase;
sprot_id sp|Q58424|SERA_METJA;
sprot_target db:uniprot_sprot|sp|Q58424|SERA_METJA 22 324 evalue:9.0e-38 qcov:88.60 identity:31.80;
40425 39265 CDS
ID metaerg.pl|06683
allec_ids 5.1.1.20;
allgo_ids GO:0046872; GO:0016855; GO:0016998; GO:0071555; GO:0009063;
allko_ids K01856; K01631; K01684; K01781; K19802;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SAR202;f__UBA11138;g__UBA1123;s__UBA1123 sp002313895;
genomedb_acc GCA_002313895.1;
genomedb_target db:genomedb|GCA_002313895.1|DCAW01000044.1_6 3 383 evalue:1.7e-83 qcov:98.70 identity:42.00;
kegg_pathway_id 00364; 00052; 00622; 00362;
kegg_pathway_name Fluorobenzoate degradation; Galactose metabolism; Toluene and xylene degradation; Benzoate degradation via hydroxylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF13378; PF02746;
pfam_desc Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain;
pfam_id MR_MLE_C; MR_MLE_N;
pfam_target db:Pfam-A.hmm|PF13378.6 evalue:2.3e-58 score:196.6 best_domain_score:196.0 name:MR_MLE_C; db:Pfam-A.hmm|PF02746.16 evalue:3.9e-21 score:74.7 best_domain_score:73.9 name:MR_MLE_N;
sprot_desc L-Ala-D/L-Glu epimerase;
sprot_id sp|Q97MK4|AEEP_CLOAB;
sprot_target db:uniprot_sprot|sp|Q97MK4|AEEP_CLOAB 12 371 evalue:7.8e-30 qcov:93.30 identity:27.00;
41573 40548 CDS
ID metaerg.pl|06684
allgo_ids GO:0016705; GO:0055114;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Prauserella_A;s__Prauserella_A sp003202235;
genomedb_acc GCF_003202235.1;
genomedb_target db:genomedb|GCF_003202235.1|WP_110335829.1 7 339 evalue:3.8e-106 qcov:97.70 identity:56.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:1.3e-44 score:152.1 best_domain_score:151.7 name:Bac_luciferase;
42298 41618 CDS
ID metaerg.pl|06685
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__70-18;s__70-18 sp001899585;
genomedb_acc GCA_001899585.1;
genomedb_target db:genomedb|GCA_001899585.1|OJY64906.1 7 221 evalue:1.7e-25 qcov:95.10 identity:40.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
43504 42314 CDS
ID metaerg.pl|06686
allgo_ids GO:0016021; GO:0055085;
allko_ids K08217; K08219; K02575; K08177; K03762; K05820;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces thermovulgaris;
genomedb_acc GCF_002155915.1;
genomedb_target db:genomedb|GCF_002155915.1|WP_086793919.1 4 370 evalue:3.6e-44 qcov:92.70 identity:33.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:1.7e-35 score:121.8 best_domain_score:119.5 name:MFS_1;
tm_num 12;
43504 42314 transmembrane_helix
ID metaerg.pl|06687
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
topology i42317-42382o42410-42478i42497-42550o42563-42631i42668-42736o42764-42832i42893-42961o42998-43066i43103-43171o43181-43249i43283-43351o43367-43435i;
44430 43744 CDS
ID metaerg.pl|06688
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
tm_num 4;
44430 43744 transmembrane_helix
ID metaerg.pl|06689
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
topology o43786-43854i43873-43941o44209-44277i44296-44355o;
45962 44427 CDS
ID metaerg.pl|06690
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Caldibacillaceae_A;g__Bacillus_BF;s__Bacillus_BF oleivorans;
genomedb_acc GCF_900207585.1;
genomedb_target db:genomedb|GCF_900207585.1|WP_097160587.1 1 478 evalue:6.6e-163 qcov:93.50 identity:59.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF01970;
pfam_desc Tripartite tricarboxylate transporter TctA family;
pfam_id TctA;
pfam_target db:Pfam-A.hmm|PF01970.16 evalue:5.9e-118 score:393.4 best_domain_score:392.9 name:TctA;
tm_num 13;
45962 44427 transmembrane_helix
ID metaerg.pl|06691
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
topology o44484-44552i44565-44633o44748-44816i44835-44903o44916-44975i45012-45080o45171-45239i45375-45443o45480-45548i45567-45635o45645-45698i45705-45758o45801-45869i;
47440 46148 CDS
ID metaerg.pl|06692
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Amphibacillaceae;g__Virgibacillus_E;s__Virgibacillus_E ndiopensis;
genomedb_acc GCF_900187325.1;
genomedb_target db:genomedb|GCF_900187325.1|WP_099156985.1 83 424 evalue:3.8e-63 qcov:79.50 identity:41.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
sp YES;
46148 46288 lipoprotein_signal_peptide
ID metaerg.pl|06693
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
49296 47620 CDS
ID metaerg.pl|06694
allec_ids 4.1.1.1;
allgo_ids GO:0016491; GO:0055114; GO:0005829; GO:0016831; GO:0000287; GO:0004737; GO:0030976; GO:0006091; GO:0006090;
allko_ids K12732; K01652; K01637; K03852; K04103; K01568; K01576;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108666005.1 3 552 evalue:1.6e-109 qcov:98.60 identity:43.30;
kegg_pathway_id 00430; 00770; 00380; 00290; 00622; 00010; 00630; 00660; 00650; 00362;
kegg_pathway_name Taurine and hypotaurine metabolism; Pantothenate and CoA biosynthesis; Tryptophan metabolism; Valine, leucine and isoleucine biosynthesis; Toluene and xylene degradation; Glycolysis / Gluconeogenesis; Glyoxylate and dicarboxylate metabolism; C5-Branched dibasic acid metabolism; Butanoate metabolism; Benzoate degradation via hydroxylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-5057; PWY-6333; PWY-3801; PWY-5768; PWY-5076; PWY-5486; PWY3O-440; PWY-6330;
metacyc_pathway_name L-valine degradation II;; acetaldehyde biosynthesis I;; sucrose degradation II (sucrose synthase);; pyruvate fermentation to acetate VIII;; L-leucine degradation III;; pyruvate fermentation to ethanol II;; pyruvate fermentation to acetoin III;; acetaldehyde biosynthesis II;;
metacyc_pathway_type VALINE-DEG;; Acetaldehyde-Biosynthesis;; SUCROSE-DEG;; Pyruvate-Acetate-Fermentation;; LEUCINE-DEG;; Pyruvate-Ethanol-Fermentation;; Acetoin-Biosynthesis;; Acetaldehyde-Biosynthesis; SECONDARY-METABOLITE-BIOSYNTHESIS;;
pfam_acc PF01855; PF02775; PF00205; PF02776;
pfam_desc Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain;
pfam_id POR_N; TPP_enzyme_C; TPP_enzyme_M; TPP_enzyme_N;
pfam_target db:Pfam-A.hmm|PF01855.19 evalue:1.5e-05 score:24.1 best_domain_score:20.4 name:POR_N; db:Pfam-A.hmm|PF02775.21 evalue:5.6e-22 score:77.4 best_domain_score:74.9 name:TPP_enzyme_C; db:Pfam-A.hmm|PF00205.22 evalue:6.6e-27 score:93.2 best_domain_score:92.1 name:TPP_enzyme_M; db:Pfam-A.hmm|PF02776.18 evalue:1.1e-36 score:125.3 best_domain_score:123.7 name:TPP_enzyme_N;
sprot_desc Probable pyruvate decarboxylase C1F8.07c;
sprot_id sp|Q92345|PDC2_SCHPO;
sprot_target db:uniprot_sprot|sp|Q92345|PDC2_SCHPO 1 479 evalue:2.3e-19 qcov:85.80 identity:24.20;
49516 50679 CDS
ID metaerg.pl|06695
allec_ids 5.3.3.6;
allgo_ids GO:0050100; GO:0051187;
allko_ids K20451;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycolicibacterium;s__Mycolicibacterium sp001545925;
genomedb_acc GCF_001545925.1;
genomedb_target db:genomedb|GCF_001545925.1|WP_082753576.1 1 377 evalue:1.2e-97 qcov:97.40 identity:51.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-5062;
metacyc_pathway_name superpathway of nicotinate degradation;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;;
pfam_acc PF04303;
pfam_desc PrpF protein;
pfam_id PrpF;
pfam_target db:Pfam-A.hmm|PF04303.13 evalue:1e-105 score:353.0 best_domain_score:352.8 name:PrpF;
sprot_desc 3-methylitaconate isomerase;
sprot_id sp|Q0QLE6|MII_EUBBA;
sprot_target db:uniprot_sprot|sp|Q0QLE6|MII_EUBBA 9 375 evalue:2.8e-72 qcov:94.80 identity:41.20;
50732 51778 CDS
ID metaerg.pl|06696
allec_ids 1.1.1.27;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0004459;
allko_ids K00016;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA3495;f__UBA3495;g__Bin87;s__Bin87 sp002238825;
genomedb_acc GCA_002238825.1;
genomedb_target db:genomedb|GCA_002238825.1|MPNC01000002.1_209 1 343 evalue:2.9e-101 qcov:98.60 identity:54.20;
kegg_pathway_id 00272; 00640; 00620; 00010;
kegg_pathway_name Cysteine metabolism; Propanoate metabolism; Pyruvate metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id P122-PWY; PWY-5100; P461-PWY; P41-PWY; PWY-5481; PWY-3801; ANAEROFRUCAT-PWY; P124-PWY;
metacyc_pathway_name heterolactic fermentation;; pyruvate fermentation to acetate and lactate II;; hexitol fermentation to lactate, formate, ethanol and acetate;; pyruvate fermentation to acetate and (S)-lactate I;; pyruvate fermentation to (S)-lactate;; sucrose degradation II (sucrose synthase);; homolactic fermentation;; Bifidobacterium shunt;;
metacyc_pathway_type Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Pyruvate-Lactate-Fermentation;; SUCROSE-DEG;; Fermentation-to-Lactate; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;;
pfam_acc PF02615;
pfam_desc Malate/L-lactate dehydrogenase;
pfam_id Ldh_2;
pfam_target db:Pfam-A.hmm|PF02615.14 evalue:1e-112 score:375.8 best_domain_score:375.6 name:Ldh_2;
sprot_desc L-lactate dehydrogenase;
sprot_id sp|Q07251|LDH_CUPNH;
sprot_target db:uniprot_sprot|sp|Q07251|LDH_CUPNH 14 343 evalue:2.1e-42 qcov:94.80 identity:36.70;
51872 52684 CDS
ID metaerg.pl|06697
allec_ids 1.1.1.36;
allgo_ids GO:0005737; GO:0018454; GO:0042619;
allko_ids K00023;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium;s__Mesorhizobium sp000824805;
genomedb_acc GCF_000824805.1;
genomedb_target db:genomedb|GCF_000824805.1|WP_040997228.1 15 262 evalue:1.7e-45 qcov:91.90 identity:39.50;
kegg_pathway_id 00650;
kegg_pathway_name Butanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY1-3; PWY-5676; PWY-5080;
metacyc_pathway_name polyhydroxybutanoate biosynthesis;; acetyl-CoA fermentation to butanoate II;; very long chain fatty acid biosynthesis I;;
metacyc_pathway_type Storage-Compounds-Biosynthesis;; Acetyl-CoA-Butyrate; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:7.5e-40 score:135.7 best_domain_score:135.4 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:5.2e-49 score:166.1 best_domain_score:165.8 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:1.2e-07 score:31.1 best_domain_score:30.5 name:KR;
sprot_desc Acetoacetyl-CoA reductase;
sprot_id sp|P50205|PHAB_RHIME;
sprot_target db:uniprot_sprot|sp|P50205|PHAB_RHIME 20 264 evalue:7.1e-30 qcov:90.70 identity:34.10;
52719 53786 CDS
ID metaerg.pl|06698
allec_ids 1.1.1.85;
allgo_ids GO:0016616; GO:0055114; GO:0005739; GO:0003862; GO:0046553; GO:0047046; GO:0000287; GO:0051287; GO:0019298; GO:0009097; GO:0009098; GO:0009085;
allko_ids K10978; K00052;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus chilensis;
genomedb_acc GCF_002802985.1;
genomedb_target db:genomedb|GCF_002802985.1|WP_100499158.1 5 354 evalue:6.2e-120 qcov:98.60 identity:61.40;
kegg_pathway_id 00290;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id BRANCHED-CHAIN-AA-SYN-PWY; LEUSYN-PWY;
metacyc_pathway_name superpathway of branched chain amino acid biosynthesis;; L-leucine biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; LEUCINE-SYN;;
pfam_acc PF00180;
pfam_desc Isocitrate/isopropylmalate dehydrogenase;
pfam_id Iso_dh;
pfam_target db:Pfam-A.hmm|PF00180.20 evalue:1.9e-80 score:269.8 best_domain_score:269.6 name:Iso_dh;
sprot_desc 3-isopropylmalate/3-methylmalate dehydrogenase;
sprot_id sp|Q58130|LEU3_METJA;
sprot_target db:uniprot_sprot|sp|Q58130|LEU3_METJA 4 350 evalue:8.4e-55 qcov:97.70 identity:37.80;
53809 54819 CDS
ID metaerg.pl|06699
allgo_ids GO:0016705; GO:0055114;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus sp900104025;
genomedb_acc GCF_900104025.1;
genomedb_target db:genomedb|GCF_900104025.1|WP_091373731.1 1 332 evalue:1.2e-120 qcov:98.80 identity:62.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:1.9e-47 score:161.4 best_domain_score:161.2 name:Bac_luciferase;
55811 54831 CDS
ID metaerg.pl|06700
allec_ids 4.3.1.16;
allgo_ids GO:0005524; GO:0008721; GO:0003941; GO:0000287; GO:0030170; GO:0030378; GO:0030848; GO:0018114; GO:0042219; GO:0070179; GO:0006563; GO:0042866;
allko_ids K01738; K10150; K12339; K13034; K01754; K01697; K01733; K22589;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__20CM-4-69-9;f__20CM-4-69-9;g__Palsa-739;s__Palsa-739 sp003161615;
genomedb_acc GCA_003161615.1;
genomedb_target db:genomedb|GCA_003161615.1|PMOB01000017.1_62 1 316 evalue:1.3e-108 qcov:96.90 identity:67.70;
kegg_pathway_id 00272; 00260; 00290; 00750; 00920; 00271; 00450;
kegg_pathway_name Cysteine metabolism; Glycine, serine and threonine metabolism; Valine, leucine and isoleucine biosynthesis; Vitamin B6 metabolism; Sulfur metabolism; Methionine metabolism; Selenoamino acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:4e-81 score:271.9 best_domain_score:271.7 name:PALP;
sprot_desc L-threo-3-hydroxyaspartate ammonia-lyase;
sprot_id sp|P36007|LTHAD_YEAST;
sprot_target db:uniprot_sprot|sp|P36007|LTHAD_YEAST 6 316 evalue:4.0e-80 qcov:95.40 identity:50.80;
55987 57165 CDS
ID metaerg.pl|06701
allgo_ids GO:0009058; GO:0030170;
allko_ids K01556;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Sciscionella;s__Sciscionella marina;
genomedb_acc GCF_000379465.1;
genomedb_target db:genomedb|GCF_000379465.1|WP_020497483.1 24 390 evalue:2.5e-77 qcov:93.60 identity:46.30;
kegg_pathway_id 00380;
kegg_pathway_name Tryptophan metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF00155; PF00266; PF01041;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; Aminotran_5; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:6.5e-06 score:24.8 best_domain_score:16.7 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:2.5e-49 score:167.4 best_domain_score:166.4 name:Aminotran_5; db:Pfam-A.hmm|PF01041.17 evalue:2.4e-08 score:32.9 best_domain_score:32.3 name:DegT_DnrJ_EryC1;
57531 57172 CDS
ID metaerg.pl|06702
allec_ids 4.1.1.44;
allgo_ids GO:0051920; GO:0055114; GO:0047575; GO:0042952;
allko_ids K01607;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Reyranellales;f__Reyranellaceae;g__Reyranella;s__Reyranella sp001767945;
genomedb_acc GCA_001767945.1;
genomedb_target db:genomedb|GCA_001767945.1|OFW97554.1 19 115 evalue:5.5e-28 qcov:81.50 identity:55.70;
kegg_pathway_id 00362;
kegg_pathway_name Benzoate degradation via hydroxylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY; PWY-2504; PWY-5183; PWY-5181; PWY-5431;
metacyc_pathway_name protocatechuate degradation II (ortho-cleavage pathway);; superpathway of aromatic compound degradation via 3-oxoadipate;; superpathway of aerobic toluene degradation;; toluene degradation III (aerobic) (via p-cresol);; aromatic compounds degradation via β-ketoadipate;;
metacyc_pathway_type Protocatechuate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Super-Pathways; TOLUENE-DEG;; Catechol-Degradation; Super-Pathways;;
pfam_acc PF02627;
pfam_desc Carboxymuconolactone decarboxylase family;
pfam_id CMD;
pfam_target db:Pfam-A.hmm|PF02627.20 evalue:3.4e-17 score:61.5 best_domain_score:61.0 name:CMD;
sprot_desc 4-carboxymuconolactone decarboxylase;
sprot_id sp|P20370|DC4C_ACIAD;
sprot_target db:uniprot_sprot|sp|P20370|DC4C_ACIAD 20 114 evalue:5.4e-14 qcov:79.80 identity:36.80;
57661 58677 CDS
ID metaerg.pl|06703
allgo_ids GO:0016705; GO:0055114;
genomedb_OC d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__GWA2-73-35;g__CSP1-6;s__CSP1-6 sp001443385;
genomedb_acc GCA_001443385.1;
genomedb_target db:genomedb|GCA_001443385.1|KRT72467.1 5 334 evalue:2.5e-86 qcov:97.60 identity:49.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:8.5e-46 score:156.0 best_domain_score:155.7 name:Bac_luciferase;
60172 58688 CDS
ID metaerg.pl|06704
allec_ids 4.2.1.-; 4.2.1.79;
allgo_ids GO:0016829; GO:0051537; GO:0047547; GO:0019629; GO:0019679; GO:0030435; GO:0006099;
allko_ids K01720;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas gudaonensis;
genomedb_acc GCF_900100195.1;
genomedb_target db:genomedb|GCF_900100195.1|WP_089689134.1 1 490 evalue:1.7e-200 qcov:99.20 identity:70.00;
kegg_pathway_id 00640;
kegg_pathway_name Propanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-6007; PWY-5061; FASYN-ELONG-PWY; PWY0-42; PWY-5184; CARNMET-PWY; BENZCOA-PWY; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; PWY1A0-6325; PWY0-881; PWY-6113; CENTBENZCOA-PWY; PWY-5367; PWYG-321;
metacyc_pathway_name (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis II;; 6,7,4'-trihydroxyisoflavone biosynthesis;; fatty acid elongation -- saturated;; 2-methylcitrate cycle I;; toluene degradation VI (anaerobic);; L-carnitine degradation I;; anaerobic aromatic compound degradation (Thauera aromatica);; 4-hydroxyphenylacetate degradation;; actinorhodin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of mycolate biosynthesis;; benzoyl-CoA degradation II (anaerobic);; petroselinate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type DMNT-Biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis;; Methyl-Citrate-Cycle;; Super-Pathways; TOLUENE-DEG;; CARN-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; Antibiotic-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Benzoyl-CoA-Degradation;; Unsaturated-Fatty-Acids-Biosynthesis;; Fatty-acid-biosynthesis;;
pfam_acc PF03972;
pfam_desc MmgE/PrpD family;
pfam_id MmgE_PrpD;
pfam_target db:Pfam-A.hmm|PF03972.14 evalue:3.2e-136 score:453.6 best_domain_score:453.3 name:MmgE_PrpD;
sprot_desc Citrate/2-methylcitrate dehydratase;
sprot_id sp|P45859|MMGE_BACSU;
sprot_target db:uniprot_sprot|sp|P45859|MMGE_BACSU 11 491 evalue:1.9e-158 qcov:97.40 identity:58.20;
tigrfam_acc TIGR02330;
tigrfam_desc 2-methylcitrate dehydratase;
tigrfam_name prpD;
tigrfam_target db:TIGRFAMs.hmm|TIGR02330 evalue:1.2e-232 score:771.8 best_domain_score:771.6 name:TIGR02330;
60867 60214 CDS
ID metaerg.pl|06705
allec_ids 4.1.3.17;
allgo_ids GO:0047443; GO:0046872; GO:0046274; GO:0019617;
allko_ids K10218;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Granulicella_A;s__Granulicella_A sp003138795;
genomedb_acc GCA_003138795.1;
genomedb_target db:genomedb|GCA_003138795.1|PLHC01000127.1_12 3 217 evalue:6.0e-65 qcov:99.10 identity:58.10;
kegg_pathway_id 00660; 00362;
kegg_pathway_name C5-Branched dibasic acid metabolism; Benzoate degradation via hydroxylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id GALLATE-DEGRADATION-I-PWY; METHYLGALLATE-DEGRADATION-PWY;
metacyc_pathway_name gallate degradation II;; methylgallate degradation;;
metacyc_pathway_type GALLATE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION;;
pfam_acc PF03737;
pfam_desc Aldolase/RraA;
pfam_id RraA-like;
pfam_target db:Pfam-A.hmm|PF03737.15 evalue:6.4e-30 score:103.5 best_domain_score:103.2 name:RraA-like;
sprot_desc 4-carboxy-4-hydroxy-2-oxoadipate aldolase;
sprot_id sp|G2IQQ8|LIGK_SPHSK;
sprot_target db:uniprot_sprot|sp|G2IQQ8|LIGK_SPHSK 1 209 evalue:2.6e-14 qcov:96.30 identity:30.10;
61012 62136 CDS
ID metaerg.pl|06706
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441801.1 23 369 evalue:3.5e-65 qcov:92.80 identity:42.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF10094;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2332);
pfam_id DUF2332;
pfam_target db:Pfam-A.hmm|PF10094.9 evalue:6.6e-83 score:278.2 best_domain_score:277.9 name:DUF2332;
63197 62385 CDS
ID metaerg.pl|06707
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycolicibacterium;s__Mycolicibacterium agri;
genomedb_acc GCF_002553505.1;
genomedb_target db:genomedb|GCF_002553505.1|WP_097940608.1 6 263 evalue:4.7e-35 qcov:95.60 identity:37.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF01261;
pfam_desc Xylose isomerase-like TIM barrel;
pfam_id AP_endonuc_2;
pfam_target db:Pfam-A.hmm|PF01261.24 evalue:5.1e-20 score:71.1 best_domain_score:70.6 name:AP_endonuc_2;
64079 63201 CDS
ID metaerg.pl|06708
allec_ids 3.8.1.3;
allgo_ids GO:0015996; GO:0047746; GO:0018785;
allko_ids K01561;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Elsterales;f__URHD0088;g__URHD0088;s__URHD0088 sp000518365;
genomedb_acc GCF_000518365.1;
genomedb_target db:genomedb|GCF_000518365.1|WP_027298113.1 1 290 evalue:1.8e-101 qcov:99.30 identity:62.10;
kegg_pathway_id 00361; 00631;
kegg_pathway_name gamma-Hexachlorocyclohexane degradation; 1,2-Dichloroethane degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF00561; PF12697; PF07224;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Chlorophyllase;
pfam_id Abhydrolase_1; Abhydrolase_6; Chlorophyllase;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:1.7e-20 score:73.0 best_domain_score:70.8 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:4.5e-19 score:69.2 best_domain_score:68.8 name:Abhydrolase_6; db:Pfam-A.hmm|PF07224.11 evalue:4.7e-05 score:21.8 best_domain_score:20.9 name:Chlorophyllase;
sprot_desc Fluoroacetate dehalogenase;
sprot_id sp|Q6NAM1|DEHA_RHOPA;
sprot_target db:uniprot_sprot|sp|Q6NAM1|DEHA_RHOPA 18 290 evalue:3.2e-60 qcov:93.50 identity:42.80;
64197 64934 CDS
ID metaerg.pl|06709
allec_ids 4.1.3.17;
allgo_ids GO:0047443; GO:0046872;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus saxobsidens_A;
genomedb_acc GCF_000284015.1;
genomedb_target db:genomedb|GCF_000284015.1|WP_014377319.1 1 223 evalue:1.8e-57 qcov:91.00 identity:52.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id METHYLGALLATE-DEGRADATION-PWY; GALLATE-DEGRADATION-I-PWY;
metacyc_pathway_name methylgallate degradation;; gallate degradation II;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;; GALLATE-DEG;;
pfam_acc PF03737;
pfam_desc Aldolase/RraA;
pfam_id RraA-like;
pfam_target db:Pfam-A.hmm|PF03737.15 evalue:1.8e-39 score:134.5 best_domain_score:134.1 name:RraA-like;
sprot_desc Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase;
sprot_id sp|Q9KBI9|RRAAH_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KBI9|RRAAH_BACHD 16 198 evalue:1.1e-29 qcov:74.70 identity:41.50;
64953 66080 CDS
ID metaerg.pl|06710
allgo_ids GO:0010468; GO:0016021;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF05145;
pfam_desc Transition state regulatory protein AbrB;
pfam_id AbrB;
pfam_target db:Pfam-A.hmm|PF05145.12 evalue:2e-51 score:174.0 best_domain_score:107.1 name:AbrB;
tigrfam_acc TIGR03082;
tigrfam_desc membrane protein AbrB duplication;
tigrfam_name Gneg_AbrB_dup;
tigrfam_target db:TIGRFAMs.hmm|TIGR03082 evalue:3.2e-50 score:169.2 best_domain_score:89.7 name:TIGR03082;
tm_num 8;
64953 66080 transmembrane_helix
ID metaerg.pl|06711
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
topology o65028-65081i65100-65168o65259-65327i65433-65501o65640-65708i65742-65801o65829-65897i66003-66071o;
66116 67042 CDS
ID metaerg.pl|06712
allgo_ids GO:0003824;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Nocardia;s__Nocardia miyunensis;
genomedb_acc GCF_001613065.1;
genomedb_target db:genomedb|GCF_001613065.1|WP_067682532.1 53 286 evalue:5.5e-48 qcov:76.00 identity:47.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF01557;
pfam_desc Fumarylacetoacetate (FAA) hydrolase family;
pfam_id FAA_hydrolase;
pfam_target db:Pfam-A.hmm|PF01557.18 evalue:4.5e-43 score:146.7 best_domain_score:146.3 name:FAA_hydrolase;
67074 68426 CDS
ID metaerg.pl|06713
allec_ids 5.5.1.2;
allgo_ids GO:0005737; GO:0047472; GO:0018842; GO:0019619; GO:0042952;
allko_ids K01679; K01744; K01756; K01857;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Derxia;s__Derxia lacustris;
genomedb_acc GCF_002105195.1;
genomedb_target db:genomedb|GCF_002105195.1|WP_085315426.1 8 442 evalue:6.3e-101 qcov:96.70 identity:50.90;
kegg_pathway_id 00020; 00230; 00252; 00720; 00910; 00362;
kegg_pathway_name Citrate cycle (TCA cycle); Purine metabolism; Alanine and aspartate metabolism; Reductive carboxylate cycle (CO2 fixation); Nitrogen metabolism; Benzoate degradation via hydroxylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-5183; PWY-2504; PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY; PWY-5431; PWY-5181;
metacyc_pathway_name superpathway of aerobic toluene degradation;; superpathway of aromatic compound degradation via 3-oxoadipate;; protocatechuate degradation II (ortho-cleavage pathway);; aromatic compounds degradation via β-ketoadipate;; toluene degradation III (aerobic) (via p-cresol);;
metacyc_pathway_type Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Protocatechuate-Degradation;; Catechol-Degradation; Super-Pathways;; Super-Pathways; TOLUENE-DEG;;
pfam_acc PF10397; PF00206;
pfam_desc Adenylosuccinate lyase C-terminus; Lyase;
pfam_id ADSL_C; Lyase_1;
pfam_target db:Pfam-A.hmm|PF10397.9 evalue:2.3e-09 score:36.9 best_domain_score:35.4 name:ADSL_C; db:Pfam-A.hmm|PF00206.20 evalue:4.5e-43 score:147.1 best_domain_score:146.0 name:Lyase_1;
sprot_desc 3-carboxy-cis,cis-muconate cycloisomerase;
sprot_id sp|Q9I6Q8|PCAB_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I6Q8|PCAB_PSEAE 10 442 evalue:9.2e-91 qcov:96.20 identity:45.90;
68538 70031 CDS
ID metaerg.pl|06714
allec_ids 1.3.99.33;
allgo_ids GO:0016491; GO:0055114; GO:0016020; GO:0010181;
allko_ids K00244; K00278;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Arthrobacter;s__Arthrobacter sp002892795;
genomedb_acc GCF_002892795.1;
genomedb_target db:genomedb|GCF_002892795.1|WP_079599236.1 2 493 evalue:4.3e-183 qcov:99.00 identity:64.20;
kegg_pathway_id 02020; 00760; 00252; 00650; 00190; 00720; 00020; 00632;
kegg_pathway_name Two-component system - General; Nicotinate and nicotinamide metabolism; Alanine and aspartate metabolism; Butanoate metabolism; Oxidative phosphorylation; Reductive carboxylate cycle (CO2 fixation); Citrate cycle (TCA cycle); Benzoate degradation via CoA ligation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF01266; PF00890;
pfam_desc FAD dependent oxidoreductase; FAD binding domain;
pfam_id DAO; FAD_binding_2;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:3.7e-08 score:32.6 best_domain_score:31.8 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:2e-42 score:145.0 best_domain_score:144.1 name:FAD_binding_2;
sprot_desc Urocanate reductase;
sprot_id sp|B2GCE0|URDA_LACF3;
sprot_target db:uniprot_sprot|sp|B2GCE0|URDA_LACF3 1 497 evalue:1.6e-27 qcov:100.00 identity:27.30;
70074 71441 CDS
ID metaerg.pl|06715
allec_ids 4.1.1.6;
allgo_ids GO:0016829; GO:0005739; GO:0047547; GO:0047613; GO:0035458; GO:0071346; GO:0071347; GO:0071222; GO:0071219; GO:0071393; GO:0071356; GO:0006952; GO:0007566; GO:0006954; GO:0050728; GO:0045824; GO:0032088; GO:0034136; GO:0034144; GO:0032480; GO:0002760; GO:2000379; GO:0019679; GO:0009617; GO:0032496; GO:0072573;
allko_ids K17724;
genomedb_OC d__Bacteria;p__UBA8248;c__UBA8248;o__UBA8248;f__UBA8248;g__Bin107;s__Bin107 sp002238965;
genomedb_acc GCA_002238965.1;
genomedb_target db:genomedb|GCA_002238965.1|MPNJ01000008.1_61 4 454 evalue:3.6e-88 qcov:99.10 identity:44.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-5750;
metacyc_pathway_name itaconate biosynthesis I;;
metacyc_pathway_type Itaconate-Biosynthesis;;
pfam_acc PF03972;
pfam_desc MmgE/PrpD family;
pfam_id MmgE_PrpD;
pfam_target db:Pfam-A.hmm|PF03972.14 evalue:1.6e-115 score:385.4 best_domain_score:385.1 name:MmgE_PrpD;
sprot_desc Cis-aconitate decarboxylase;
sprot_id sp|P54987|IRG1_MOUSE;
sprot_target db:uniprot_sprot|sp|P54987|IRG1_MOUSE 2 453 evalue:9.2e-22 qcov:99.30 identity:26.90;
tm_num 2;
70074 71441 transmembrane_helix
ID metaerg.pl|06716
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
topology i70521-70589o70602-70670i;
72882 71518 CDS
ID metaerg.pl|06717
allgo_ids GO:0003824;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Prauserella_C;s__Prauserella_C shujinwangii;
genomedb_acc GCF_003001955.1;
genomedb_target db:genomedb|GCF_003001955.1|WP_106176799.1 17 451 evalue:4.6e-83 qcov:95.80 identity:46.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF02515;
pfam_desc CoA-transferase family III;
pfam_id CoA_transf_3;
pfam_target db:Pfam-A.hmm|PF02515.17 evalue:2.3e-52 score:177.6 best_domain_score:173.9 name:CoA_transf_3;
73042 74217 CDS
ID metaerg.pl|06718
allgo_ids GO:0016021; GO:0055085;
allko_ids K08219; K08217; K02575; K03762;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter_B;s__Rubrobacter_B xylanophilus;
genomedb_acc GCF_000014185.1;
genomedb_target db:genomedb|GCF_000014185.1|WP_011565355.1 11 382 evalue:1.3e-57 qcov:95.10 identity:41.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:4.6e-28 score:97.4 best_domain_score:94.7 name:MFS_1;
sp YES;
tm_num 10;
73042 73143 signal_peptide
ID metaerg.pl|06719
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
73042 74217 transmembrane_helix
ID metaerg.pl|06720
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
topology i73078-73146o73174-73242i73303-73371o73480-73548i73666-73734o73762-73830i73849-73917o73945-74004i74041-74109o74122-74190i;
74612 74280 CDS
ID metaerg.pl|06721
allgo_ids GO:0051920; GO:0055114;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces_G;s__Streptomyces_G gilvigriseus;
genomedb_acc GCF_001879105.1;
genomedb_target db:genomedb|GCF_001879105.1|WP_071655339.1 1 108 evalue:2.3e-28 qcov:98.20 identity:61.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF02627;
pfam_desc Carboxymuconolactone decarboxylase family;
pfam_id CMD;
pfam_target db:Pfam-A.hmm|PF02627.20 evalue:4.9e-21 score:73.8 best_domain_score:73.5 name:CMD;
75776 74667 CDS
ID metaerg.pl|06722
allec_ids 1.4.3.19;
allgo_ids GO:0016491; GO:0055114; GO:0050660; GO:0043799; GO:0009228; GO:0009229;
allko_ids K00285;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Kaistiaceae;g__Kaistia;s__Kaistia granuli;
genomedb_acc GCF_000380505.1;
genomedb_target db:genomedb|GCF_000380505.1|WP_018182817.1 1 362 evalue:2.2e-59 qcov:98.10 identity:39.40;
kegg_pathway_id 00910; 00360;
kegg_pathway_name Nitrogen metabolism; Phenylalanine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF01593; PF01266; PF00890; PF01134; PF13450; PF13454; PF07992;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; Glucose inhibited division protein A; NAD(P)-binding Rossmann-like domain; FAD-NAD(P)-binding; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; DAO; FAD_binding_2; GIDA; NAD_binding_8; NAD_binding_9; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:0.0001 score:20.9 best_domain_score:15.8 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:3.3e-47 score:161.0 best_domain_score:160.8 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.1e-09 score:37.2 best_domain_score:36.0 name:FAD_binding_2; db:Pfam-A.hmm|PF01134.22 evalue:2.8e-06 score:25.9 best_domain_score:16.8 name:GIDA; db:Pfam-A.hmm|PF13450.6 evalue:2.4e-06 score:26.9 best_domain_score:25.7 name:NAD_binding_8; db:Pfam-A.hmm|PF13454.6 evalue:1e-05 score:24.8 best_domain_score:15.1 name:NAD_binding_9; db:Pfam-A.hmm|PF07992.14 evalue:4.8e-11 score:41.6 best_domain_score:22.1 name:Pyr_redox_2;
sprot_desc Glycine oxidase;
sprot_id sp|S5FMM4|GLYOX_BACLI;
sprot_target db:uniprot_sprot|sp|S5FMM4|GLYOX_BACLI 5 365 evalue:5.7e-14 qcov:97.80 identity:24.30;
77085 75841 CDS
ID metaerg.pl|06723
allgo_ids GO:0016021; GO:0055085;
allko_ids K08217; K08219; K03762; K02575;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia acaciae;
genomedb_acc GCF_000620785.1;
genomedb_target db:genomedb|GCF_000620785.1|WP_028924576.1 36 403 evalue:1.8e-65 qcov:88.90 identity:45.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:7.4e-24 score:83.6 best_domain_score:70.6 name:MFS_1;
tm_num 10;
77085 75841 transmembrane_helix
ID metaerg.pl|06724
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
topology i75928-75996o76024-76092i76153-76221o76381-76449i76519-76587o76597-76665i76702-76770o76783-76851i76888-76956o76966-77034i;
77864 77082 CDS
ID metaerg.pl|06725
allec_ids 1.1.1.-;
allgo_ids GO:0005737; GO:0005759; GO:0005739; GO:0005635; GO:0005634; GO:0004090; GO:0008207; GO:0034599; GO:0043011; GO:0043066; GO:0008285; GO:0055114; GO:0009636;
allko_ids K12420; K11164;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Allonocardiopsis;s__Allonocardiopsis opalescens;
genomedb_acc GCF_003002095.1;
genomedb_target db:genomedb|GCF_003002095.1|WP_106239896.1 4 260 evalue:3.1e-68 qcov:98.80 identity:56.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-6575; PWY-6501; BENZCOA-PWY; PWY-5197; PWY-5184; P302-PWY; PWY-5392; PWY-5516; PWY-5195; PWY-5466; PWY-5972; PWY-6577; TOLSULFDEG-PWY; PWY-5048; ECASYN-PWY; PWY-5789; PWY-481; PWY-882; PWY-5327; SUCROSEUTIL2-PWY; PWY-6419; PWY-1186; PWY1A0-6325; PWY-6516; PWY-321; LYSDEGII-PWY; CENTBENZCOA-PWY; 4TOLCARBDEG-PWY;
metacyc_pathway_name juvenile hormone III biosynthesis I;; D-glucuronate degradation II;; anaerobic aromatic compound degradation (Thauera aromatica);; lactate biosynthesis (archaea);; toluene degradation VI (anaerobic);; L-sorbose degradation;; reductive TCA cycle II;; D-xylose degradation II;; artemisinin and arteannuin B biosynthesis;; matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);; farnesylcysteine salvage pathway;; 4-toluenesulfonate degradation I;; rosmarinic acid biosynthesis I;; enterobacterial common antigen biosynthesis;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; ethylbenzene degradation (anaerobic);; L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of L-lysine degradation;; sucrose degradation VII (sucrose 3-dehydrogenase);; shikimate degradation II;; L-homomethionine biosynthesis;; actinorhodin biosynthesis;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; cutin biosynthesis;; L-lysine degradation III;; benzoyl-CoA degradation II (anaerobic);; 4-toluenecarboxylate degradation;;
metacyc_pathway_type HORMONE-SYN; JH-III-Biosynthesis;; D-Glucuronate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Energy-Metabolism;; Super-Pathways; TOLUENE-DEG;; Sugars-And-Polysaccharides-Degradation;; Reductive-TCA-Cycles;; Xylose-Degradation;; SESQUITERPENE-LACTONE;; LIGNAN-SYN;; Stearate-Biosynthesis;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; 4-Toluenesulfonate-Degradation;; Rosmarinate-Biosynthesis;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;; AROMATIC-COMPOUNDS-DEGRADATION;; Ascorbate-Biosynthesis;; LYSINE-DEG; Super-Pathways;; SUCROSE-DEG;; Shikimate-Degradation;; Other-Amino-Acid-Biosynthesis;; Antibiotic-Biosynthesis;; Sugar-Derivatives; Super-Pathways;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; LYSINE-DEG;; Benzoyl-CoA-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:3.5e-40 score:136.8 best_domain_score:136.5 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:4.4e-48 score:163.1 best_domain_score:162.6 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:2.2e-07 score:30.2 best_domain_score:28.0 name:KR;
sp YES;
sprot_desc Dehydrogenase/reductase SDR family member 2, mitochondrial;
sprot_id sp|Q13268|DHRS2_HUMAN;
sprot_target db:uniprot_sprot|sp|Q13268|DHRS2_HUMAN 6 253 evalue:1.0e-25 qcov:95.40 identity:31.20;
77082 77153 signal_peptide
ID metaerg.pl|06726
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
79228 77861 CDS
ID metaerg.pl|06727
allgo_ids GO:0016021; GO:0055085;
allko_ids K02575; K08177; K08219; K08217;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter;s__Rubrobacter radiotolerans;
genomedb_acc GCF_900175965.1;
genomedb_target db:genomedb|GCF_900175965.1|WP_051589272.1 11 385 evalue:3.0e-74 qcov:82.40 identity:49.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:1.3e-30 score:105.7 best_domain_score:63.5 name:MFS_1;
tm_num 12;
79228 77861 transmembrane_helix
ID metaerg.pl|06728
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
topology i77897-77965o77993-78061i78080-78148o78158-78211i78272-78340o78353-78406i78485-78553o78581-78649i78683-78742o78755-78823i78860-78928o78938-79006i;
79370 79891 CDS
ID metaerg.pl|06729
allgo_ids GO:0051920; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium;s__Methylobacterium sp003058325;
genomedb_acc GCF_003058325.1;
genomedb_target db:genomedb|GCF_003058325.1|WP_099955558.1 1 169 evalue:4.7e-28 qcov:97.70 identity:47.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF02627;
pfam_desc Carboxymuconolactone decarboxylase family;
pfam_id CMD;
pfam_target db:Pfam-A.hmm|PF02627.20 evalue:1.1e-12 score:47.1 best_domain_score:46.9 name:CMD;
80336 79902 CDS
ID metaerg.pl|06730
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__UBA10329;g__UBA10329;s__UBA10329 sp003456455;
genomedb_acc GCA_003456455.1;
genomedb_target db:genomedb|GCA_003456455.1|HAP69304.1 1 119 evalue:4.0e-09 qcov:82.60 identity:29.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF10604;
pfam_desc Polyketide cyclase / dehydrase and lipid transport;
pfam_id Polyketide_cyc2;
pfam_target db:Pfam-A.hmm|PF10604.9 evalue:4.7e-09 score:35.9 best_domain_score:35.6 name:Polyketide_cyc2;
81023 80415 CDS
ID metaerg.pl|06731
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus saxobsidens;
genomedb_acc GCF_002938435.1;
genomedb_target db:genomedb|GCF_002938435.1|WP_104527071.1 1 202 evalue:1.4e-39 qcov:100.00 identity:43.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
82166 81279 CDS
ID metaerg.pl|06732
allec_ids 1.1.1.60;
allgo_ids GO:0051287; GO:0008679; GO:0050661; GO:0046392; GO:0046487;
allko_ids K00020; K00042;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinophytocola;s__Actinophytocola xinjiangensis;
genomedb_acc GCF_001921215.1;
genomedb_target db:genomedb|GCF_001921215.1|WP_075130797.1 1 290 evalue:6.4e-70 qcov:98.30 identity:54.10;
kegg_pathway_id 00630; 00280;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id GLYCOL-GLYOXDEG-PWY; GLYCOLATEMET-PWY; PWY-6516;
metacyc_pathway_name superpathway of glycol metabolism and degradation;; glycolate and glyoxylate degradation I;; superpathway of microbial D-galacturonate and D-glucuronate degradation;;
metacyc_pathway_type Alcohol-Degradation; Super-Pathways;; Glycolate-Degradation;; Sugar-Derivatives; Super-Pathways;;
pfam_acc PF03807; PF14833; PF03446;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id F420_oxidored; NAD_binding_11; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:4.1e-09 score:36.2 best_domain_score:34.9 name:F420_oxidored; db:Pfam-A.hmm|PF14833.6 evalue:1.6e-33 score:114.8 best_domain_score:114.8 name:NAD_binding_11; db:Pfam-A.hmm|PF03446.15 evalue:1.4e-47 score:161.0 best_domain_score:161.0 name:NAD_binding_2;
sprot_desc 2-hydroxy-3-oxopropionate reductase;
sprot_id sp|P0ABQ3|GARR_ECOL6;
sprot_target db:uniprot_sprot|sp|P0ABQ3|GARR_ECOL6 1 288 evalue:4.0e-50 qcov:97.60 identity:40.30;
83026 82166 CDS
ID metaerg.pl|06733
allec_ids 5.3.1.22;
allgo_ids GO:0008903; GO:0016857;
allko_ids K01816;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Thermomonospora_B;s__Thermomonospora_B chromogena;
genomedb_acc GCF_900099985.1;
genomedb_target db:genomedb|GCF_900099985.1|WP_093259405.1 7 256 evalue:4.2e-58 qcov:87.40 identity:48.80;
kegg_pathway_id 00630;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF01261;
pfam_desc Xylose isomerase-like TIM barrel;
pfam_id AP_endonuc_2;
pfam_target db:Pfam-A.hmm|PF01261.24 evalue:1.2e-23 score:82.9 best_domain_score:82.5 name:AP_endonuc_2;
sprot_desc Putative hydroxypyruvate isomerase;
sprot_id sp|Q9Z596|Y6206_STRCO;
sprot_target db:uniprot_sprot|sp|Q9Z596|Y6206_STRCO 7 262 evalue:5.2e-47 qcov:89.50 identity:41.30;
83418 83023 CDS
ID metaerg.pl|06734
allgo_ids GO:0045735;
allko_ids K00971;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis sacchari;
genomedb_acc GCF_900114035.1;
genomedb_target db:genomedb|GCF_900114035.1|WP_091504699.1 6 131 evalue:1.4e-37 qcov:96.20 identity:65.90;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF00190; PF07883;
pfam_desc Cupin; Cupin domain;
pfam_id Cupin_1; Cupin_2;
pfam_target db:Pfam-A.hmm|PF00190.22 evalue:1.2e-09 score:37.2 best_domain_score:36.9 name:Cupin_1; db:Pfam-A.hmm|PF07883.11 evalue:8.1e-13 score:47.1 best_domain_score:46.7 name:Cupin_2;
83626 84306 CDS
ID metaerg.pl|06735
allgo_ids GO:0003700; GO:0006355; GO:0043565;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus sp900104025;
genomedb_acc GCF_900104025.1;
genomedb_target db:genomedb|GCF_900104025.1|WP_091373761.1 10 221 evalue:4.6e-44 qcov:93.80 identity:48.10;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF07729; PF00392; PF13412;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family; Winged helix-turn-helix DNA-binding;
pfam_id FCD; GntR; HTH_24;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:1.1e-19 score:70.3 best_domain_score:70.3 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:9.7e-17 score:59.6 best_domain_score:58.7 name:GntR; db:Pfam-A.hmm|PF13412.6 evalue:2.6e-05 score:22.9 best_domain_score:21.5 name:HTH_24;
sprot_desc Uncharacterized HTH-type transcriptional regulator YdhC;
sprot_id sp|O05494|YDHC_BACSU;
sprot_target db:uniprot_sprot|sp|O05494|YDHC_BACSU 19 213 evalue:1.8e-10 qcov:86.30 identity:25.80;
84420 86039 CDS
ID metaerg.pl|06736
allec_ids 2.2.1.6;
allgo_ids GO:0003824; GO:0030976; GO:0003984; GO:0050660; GO:0000287; GO:0009097; GO:0009099;
allko_ids K01568; K04103; K01576; K01637; K03852; K12253; K01652; K12732;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia acaciae;
genomedb_acc GCF_000620785.1;
genomedb_target db:genomedb|GCF_000620785.1|WP_084211956.1 1 539 evalue:9.6e-181 qcov:100.00 identity:60.50;
kegg_pathway_id 00362; 00650; 00660; 00630; 00010; 00290; 00622; 00770; 00430; 00380;
kegg_pathway_name Benzoate degradation via hydroxylation; Butanoate metabolism; C5-Branched dibasic acid metabolism; Glyoxylate and dicarboxylate metabolism; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine biosynthesis; Toluene and xylene degradation; Pantothenate and CoA biosynthesis; Taurine and hypotaurine metabolism; Tryptophan metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY-6389; PWY-5104; BRANCHED-CHAIN-AA-SYN-PWY; PWY-6396; PWY-5103; PWY-5939; ILEUSYN-PWY; VALSYN-PWY; PWY-5101; THREOCAT-PWY; PWY-5938; PWY-3001;
metacyc_pathway_name pyruvate fermentation to (S)-acetoin;; L-isoleucine biosynthesis IV;; superpathway of branched chain amino acid biosynthesis;; superpathway of 2,3-butanediol biosynthesis;; L-isoleucine biosynthesis III;; pyruvate fermentation to (R)-acetoin II;; L-isoleucine biosynthesis I (from threonine);; L-valine biosynthesis;; L-isoleucine biosynthesis II;; superpathway of L-threonine metabolism;; pyruvate fermentation to (R)-acetoin I;; superpathway of L-isoleucine biosynthesis I;;
metacyc_pathway_type Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; Butanediol-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;; Super-Pathways; THREONINE-DEG;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN; Super-Pathways;;
pfam_acc PF02775; PF00205; PF02776;
pfam_desc Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain;
pfam_id TPP_enzyme_C; TPP_enzyme_M; TPP_enzyme_N;
pfam_target db:Pfam-A.hmm|PF02775.21 evalue:3e-28 score:97.8 best_domain_score:95.8 name:TPP_enzyme_C; db:Pfam-A.hmm|PF00205.22 evalue:6.5e-24 score:83.5 best_domain_score:82.0 name:TPP_enzyme_M; db:Pfam-A.hmm|PF02776.18 evalue:1.9e-46 score:157.0 best_domain_score:155.9 name:TPP_enzyme_N;
sprot_desc Probable acetolactate synthase large subunit;
sprot_id sp|Q57725|ILVB_METJA;
sprot_target db:uniprot_sprot|sp|Q57725|ILVB_METJA 16 534 evalue:1.7e-54 qcov:96.30 identity:29.50;
86076 87503 CDS
ID metaerg.pl|06737
allec_ids 1.2.1.22;
allgo_ids GO:0016491; GO:0055114; GO:0008911;
allko_ids K00294; K13821; K19266;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Jiangella;s__Jiangella alkaliphila;
genomedb_acc GCF_900105925.1;
genomedb_target db:genomedb|GCF_900105925.1|WP_046769658.1 7 471 evalue:1.8e-146 qcov:97.90 identity:59.40;
kegg_pathway_id 00330; 00251;
kegg_pathway_name Arginine and proline metabolism; Glutamate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id PWY0-1317; METHGLYUT-PWY; PWY-5197; PWY-5459;
metacyc_pathway_name L-lactaldehyde degradation (aerobic);; superpathway of methylglyoxal degradation;; lactate biosynthesis (archaea);; methylglyoxal degradation IV;;
metacyc_pathway_type Lactaldehyde-Degradation;; Aldehyde-Degradation; Super-Pathways;; Energy-Metabolism;; Methylglyoxal-Detoxification; Super-Pathways;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:4e-139 score:463.3 best_domain_score:463.1 name:Aldedh;
sprot_desc Lactaldehyde dehydrogenase;
sprot_id sp|A6UQD0|LADH_METVS;
sprot_target db:uniprot_sprot|sp|A6UQD0|LADH_METVS 6 471 evalue:8.0e-77 qcov:98.10 identity:34.30;
87540 88862 CDS
ID metaerg.pl|06738
allgo_ids GO:0005829; GO:0005634; GO:0016840;
allko_ids K01744; K01679; K01857; K01756;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methyloligellaceae;g__UBA2767;s__UBA2767 sp002897995;
genomedb_acc GCA_002897995.1;
genomedb_target db:genomedb|GCA_002897995.1|GBE43437.1 8 435 evalue:5.2e-100 qcov:97.30 identity:47.00;
kegg_pathway_id 00020; 00230; 00252; 00720; 00910; 00362;
kegg_pathway_name Citrate cycle (TCA cycle); Purine metabolism; Alanine and aspartate metabolism; Reductive carboxylate cycle (CO2 fixation); Nitrogen metabolism; Benzoate degradation via hydroxylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF10397; PF00206;
pfam_desc Adenylosuccinate lyase C-terminus; Lyase;
pfam_id ADSL_C; Lyase_1;
pfam_target db:Pfam-A.hmm|PF10397.9 evalue:1.5e-16 score:60.0 best_domain_score:58.7 name:ADSL_C; db:Pfam-A.hmm|PF00206.20 evalue:1.2e-42 score:145.7 best_domain_score:144.9 name:Lyase_1;
sprot_desc hypothetical protein;
sprot_id sp|O42889|YBN5_SCHPO;
sprot_target db:uniprot_sprot|sp|O42889|YBN5_SCHPO 11 421 evalue:8.7e-70 qcov:93.40 identity:36.50;
88859 89998 CDS
ID metaerg.pl|06739
allec_ids 5.5.1.25;
allgo_ids GO:0016853; GO:0046872; GO:0019388;
allko_ids K01856; K01631; K01684; K01781; K20549;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia acaciae;
genomedb_acc GCF_000620785.1;
genomedb_target db:genomedb|GCF_000620785.1|WP_028921101.1 11 378 evalue:4.2e-90 qcov:97.10 identity:44.50;
kegg_pathway_id 00052; 00364; 00362; 00622;
kegg_pathway_name Galactose metabolism; Fluorobenzoate degradation; Benzoate degradation via hydroxylation; Toluene and xylene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF13378; PF02746;
pfam_desc Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain;
pfam_id MR_MLE_C; MR_MLE_N;
pfam_target db:Pfam-A.hmm|PF13378.6 evalue:3.5e-55 score:186.2 best_domain_score:185.7 name:MR_MLE_C; db:Pfam-A.hmm|PF02746.16 evalue:1.6e-14 score:53.3 best_domain_score:52.1 name:MR_MLE_N;
sprot_desc 3,6-anhydro-alpha-L-galactonate cycloisomerase;
sprot_id sp|H2IFX0|ACI_VIBSJ;
sprot_target db:uniprot_sprot|sp|H2IFX0|ACI_VIBSJ 9 378 evalue:3.0e-42 qcov:97.60 identity:29.00;
90945 90016 CDS
ID metaerg.pl|06740
allec_ids 1.1.-.-;
allgo_ids GO:0051287; GO:0050661; GO:0016491;
allko_ids K00020;
genomedb_OC d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__GWA2-73-35;g__UBA12499;s__UBA12499 sp001788395;
genomedb_acc GCA_001788395.1;
genomedb_target db:genomedb|GCA_001788395.1|OGK85494.1 1 308 evalue:1.9e-96 qcov:99.70 identity:59.70;
kegg_pathway_id 00280;
kegg_pathway_name Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
metacyc_pathway_id GAMMAHEXCHLORDEG-PWY;
metacyc_pathway_name γ-hexachlorocyclohexane degradation;;
metacyc_pathway_type CHLORINATED-COMPOUNDS-DEG;;
pfam_acc PF14833; PF03446;
pfam_desc NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id NAD_binding_11; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF14833.6 evalue:3.3e-18 score:65.3 best_domain_score:65.0 name:NAD_binding_11; db:Pfam-A.hmm|PF03446.15 evalue:4.3e-37 score:126.9 best_domain_score:126.3 name:NAD_binding_2;
sprot_desc Uncharacterized oxidoreductase MT0794;
sprot_id sp|P9WNY2|Y770_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WNY2|Y770_MYCTO 3 284 evalue:1.2e-25 qcov:91.30 identity:33.70;
91712 93058 CDS
ID metaerg.pl|06741
allgo_ids GO:0016829; GO:0047547; GO:0019679;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Cupriavidus;s__Cupriavidus pickettii;
genomedb_acc GCA_000471925.1;
genomedb_target db:genomedb|GCA_000471925.1|AGW95024.1 1 440 evalue:4.3e-126 qcov:98.20 identity:58.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF03972;
pfam_desc MmgE/PrpD family;
pfam_id MmgE_PrpD;
pfam_target db:Pfam-A.hmm|PF03972.14 evalue:6.2e-120 score:399.9 best_domain_score:399.7 name:MmgE_PrpD;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P54956|YXEQ_BACSU;
sprot_target db:uniprot_sprot|sp|P54956|YXEQ_BACSU 20 444 evalue:5.1e-25 qcov:94.90 identity:27.40;
91712 91852 signal_peptide
ID metaerg.pl|06742
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
93079 93987 CDS
ID metaerg.pl|06743
allgo_ids GO:0050661;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp001905385;
genomedb_acc GCF_001905385.1;
genomedb_target db:genomedb|GCF_001905385.1|WP_073727436.1 1 285 evalue:3.4e-58 qcov:94.40 identity:49.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF09130; PF03446;
pfam_desc Domain of unknown function (DUF1932); NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id DUF1932; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF09130.11 evalue:1.5e-09 score:36.9 best_domain_score:35.2 name:DUF1932; db:Pfam-A.hmm|PF03446.15 evalue:3.1e-08 score:33.2 best_domain_score:32.6 name:NAD_binding_2;
95100 94261 CDS
ID metaerg.pl|06744
allec_ids 1.4.1.21;
allgo_ids GO:0006742; GO:0016491; GO:0019363; GO:0055114; GO:0033735; GO:0051287; GO:0050661; GO:0016639; GO:0009435;
allko_ids K06989;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__JB111;s__JB111 sp900163555;
genomedb_acc GCF_900163555.1;
genomedb_target db:genomedb|GCF_900163555.1|WP_087061034.1 2 279 evalue:1.0e-80 qcov:99.60 identity:61.50;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF01958; PF03807; PF03447;
pfam_desc Domain of unknown function DUF108; NADP oxidoreductase coenzyme F420-dependent; Homoserine dehydrogenase, NAD binding domain;
pfam_id DUF108; F420_oxidored; NAD_binding_3;
pfam_target db:Pfam-A.hmm|PF01958.18 evalue:1.1e-31 score:108.3 best_domain_score:107.8 name:DUF108; db:Pfam-A.hmm|PF03807.17 evalue:1.7e-07 score:31.0 best_domain_score:30.1 name:F420_oxidored; db:Pfam-A.hmm|PF03447.16 evalue:1.2e-07 score:31.6 best_domain_score:31.0 name:NAD_binding_3;
sprot_desc Probable L-aspartate dehydrogenase 3;
sprot_id sp|Q7WE57|ASPD3_BORBR;
sprot_target db:uniprot_sprot|sp|Q7WE57|ASPD3_BORBR 16 279 evalue:1.3e-63 qcov:94.60 identity:50.60;
95615 95319 CDS
ID metaerg.pl|06745
allgo_ids GO:0003677; GO:0006274;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus;s__Rhodococcus erythropolis;
genomedb_acc GCF_001552595.1;
genomedb_target db:genomedb|GCF_001552595.1|WP_024488189.1 1 97 evalue:2.8e-22 qcov:99.00 identity:57.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0685263; 28.7596; ; 0.275949; 29.1041;
pfam_acc PF03551; PF02334;
pfam_desc Transcriptional regulator PadR-like family; Replication terminator protein;
pfam_id PadR; RTP;
pfam_target db:Pfam-A.hmm|PF03551.14 evalue:7.4e-22 score:76.4 best_domain_score:76.1 name:PadR; db:Pfam-A.hmm|PF02334.16 evalue:9.7e-07 score:28.7 best_domain_score:28.3 name:RTP;
>Feature NODE_43_length_94447_cov_93.3488
1408 431 CDS
ID metaerg.pl|06746
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pleomorphomonadaceae_A;g__Prosthecomicrobium;s__Prosthecomicrobium hirschii;
genomedb_acc GCF_001305515.1;
genomedb_target db:genomedb|GCF_001305515.1|WP_083463672.1 12 325 evalue:1.0e-89 qcov:96.60 identity:57.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.6e-24 score:85.8 best_domain_score:49.8 name:EamA;
tm_num 9;
1408 431 transmembrane_helix
ID metaerg.pl|06747
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i539-607o635-703i740-808o821-874i899-958o971-1030i1064-1132o1145-1213i1250-1303o;
1899 2876 CDS
ID metaerg.pl|06748
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Thalassobaculales;f__Thalassobaculaceae;g__Thalassobaculum;s__Thalassobaculum litoreum;
genomedb_acc GCF_900102465.1;
genomedb_target db:genomedb|GCF_900102465.1|WP_051243575.1 39 321 evalue:1.0e-68 qcov:87.10 identity:53.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.4e-20 score:73.1 best_domain_score:40.5 name:EamA;
tm_num 10;
1899 2876 transmembrane_helix
ID metaerg.pl|06749
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i2025-2093o2121-2189i2208-2276o2286-2354i2373-2432o2445-2504i2541-2609o2625-2693i2712-2780o2790-2849i;
2903 4021 CDS
ID metaerg.pl|06750
allgo_ids GO:0010468; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pleomorphomonadaceae_A;g__Prosthecomicrobium;s__Prosthecomicrobium hirschii;
genomedb_acc GCF_001305515.1;
genomedb_target db:genomedb|GCF_001305515.1|WP_054359712.1 18 353 evalue:9.9e-84 qcov:90.30 identity:49.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF05145;
pfam_desc Transition state regulatory protein AbrB;
pfam_id AbrB;
pfam_target db:Pfam-A.hmm|PF05145.12 evalue:9.5e-81 score:270.4 best_domain_score:269.1 name:AbrB;
tigrfam_acc TIGR03082;
tigrfam_desc membrane protein AbrB duplication;
tigrfam_name Gneg_AbrB_dup;
tigrfam_target db:TIGRFAMs.hmm|TIGR03082 evalue:2.1e-61 score:205.5 best_domain_score:108.2 name:TIGR03082;
tm_num 9;
2903 4021 transmembrane_helix
ID metaerg.pl|06751
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology o2945-2998i3017-3085o3176-3244i3353-3421o3479-3535i3554-3622o3635-3688i3725-3793o3905-3973i;
4224 4940 CDS
ID metaerg.pl|06752
allgo_ids GO:0003700; GO:0006355;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pleomorphomonadaceae_A;g__Prosthecomicrobium;s__Prosthecomicrobium hirschii;
genomedb_acc GCF_001305515.1;
genomedb_target db:genomedb|GCF_001305515.1|WP_083463668.1 1 222 evalue:8.6e-65 qcov:93.30 identity:55.00;
kegg_pathway_id 00300; 00310;
kegg_pathway_name Lysine biosynthesis; Lysine degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:2e-17 score:63.0 best_domain_score:62.2 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:5.6e-19 score:66.8 best_domain_score:65.9 name:GntR;
5334 6059 CDS
ID metaerg.pl|06753
allgo_ids GO:0003824;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia;s__Devosia chinhatensis;
genomedb_acc GCF_000969445.1;
genomedb_target db:genomedb|GCF_000969445.1|WP_046104350.1 5 238 evalue:2.2e-92 qcov:97.10 identity:69.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00857;
pfam_desc Isochorismatase family;
pfam_id Isochorismatase;
pfam_target db:Pfam-A.hmm|PF00857.20 evalue:1.5e-24 score:86.3 best_domain_score:86.0 name:Isochorismatase;
6155 7708 CDS
ID metaerg.pl|06754
allgo_ids GO:0043190; GO:0030288; GO:0071916; GO:0020037; GO:0042277; GO:0061077; GO:0006935; GO:0042938; GO:0015031;
allko_ids K02035; K12368;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia;s__Devosia geojensis;
genomedb_acc GCF_000969415.1;
genomedb_target db:genomedb|GCF_000969415.1|WP_083988929.1 32 517 evalue:5.0e-187 qcov:94.00 identity:62.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:1.9e-78 score:263.3 best_domain_score:262.9 name:SBP_bac_5;
sp YES;
sprot_desc Periplasmic dipeptide transport protein;
sprot_id sp|P23847|DPPA_ECOLI;
sprot_target db:uniprot_sprot|sp|P23847|DPPA_ECOLI 1 517 evalue:3.8e-40 qcov:100.00 identity:27.40;
tm_num 1;
6155 6256 signal_peptide
ID metaerg.pl|06755
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
6155 7708 transmembrane_helix
ID metaerg.pl|06756
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i6188-6256o;
7723 8670 CDS
ID metaerg.pl|06757
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K13894; K02033; K13890;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCA08;s__HLUCCA08 sp001314655;
genomedb_acc GCA_001314655.1;
genomedb_target db:genomedb|GCA_001314655.1|KPP91336.1 1 315 evalue:1.5e-120 qcov:100.00 identity:73.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:3.2e-41 score:140.3 best_domain_score:140.3 name:BPD_transp_1;
sp YES;
sprot_desc Putative peptide transport system permease protein BruAb2_1031;
sprot_id sp|Q8VQK4|Y1031_BRUAB;
sprot_target db:uniprot_sprot|sp|Q8VQK4|Y1031_BRUAB 1 315 evalue:2.8e-54 qcov:100.00 identity:39.20;
tm_num 7;
7723 7830 signal_peptide
ID metaerg.pl|06758
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
7723 8670 transmembrane_helix
ID metaerg.pl|06759
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i7747-7815o8020-8088i8125-8193o8251-8319i8404-8472o8482-8550i8569-8637o;
8685 9584 CDS
ID metaerg.pl|06760
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K02034;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCA08;s__HLUCCA08 sp001314655;
genomedb_acc GCA_001314655.1;
genomedb_target db:genomedb|GCA_001314655.1|KPP91337.1 10 299 evalue:1.3e-105 qcov:97.00 identity:71.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:8.7e-22 score:77.0 best_domain_score:77.0 name:BPD_transp_1;
sprot_desc Putative peptide transport system permease protein BruAb2_1032;
sprot_id sp|Q8VQK5|Y1032_BRUAB;
sprot_target db:uniprot_sprot|sp|Q8VQK5|Y1032_BRUAB 13 296 evalue:7.3e-44 qcov:95.00 identity:43.70;
tm_num 4;
8685 9584 transmembrane_helix
ID metaerg.pl|06761
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i8793-8861o9003-9071i9120-9188o9474-9542i;
9614 11590 CDS
ID metaerg.pl|06762
allec_ids 3.6.3.24;
allgo_ids GO:0005524; GO:0016887; GO:0015833;
allko_ids K02003; K13892; K01997; K05847; K02010; K02056; K09817; K02006; K02052; K12371; K13896; K11084; K02017; K02034; K02032; K01996; K02071; K06861; K10441; K11072; K02045; K02068; K02028; K02065; K01995; K02049; K02031; K10112; K10111; K01998; K05816; K06857; K10235; K02013; K11076; K10243; K01990; K09812; K02018; K02023; K12372; K10000; K02000;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicyclus;s__Roseicyclus mahoneyensis;
genomedb_acc GCF_003148775.1;
genomedb_target db:genomedb|GCF_003148775.1|WP_109668628.1 1 658 evalue:3.2e-255 qcov:100.00 identity:70.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF13191; PF13304; PF13401; PF13555; PF07728; PF00005; PF01935; PF08352;
pfam_desc AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; P-loop containing region of AAA domain; AAA domain (dynein-related subfamily); ABC transporter; Helicase HerA, central domain; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id AAA_16; AAA_21; AAA_22; AAA_29; AAA_5; ABC_tran; DUF87; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF13191.6 evalue:7.3e-10 score:38.7 best_domain_score:20.6 name:AAA_16; db:Pfam-A.hmm|PF13304.6 evalue:4.4e-14 score:52.2 best_domain_score:21.5 name:AAA_21; db:Pfam-A.hmm|PF13401.6 evalue:1.2e-07 score:31.3 best_domain_score:18.1 name:AAA_22; db:Pfam-A.hmm|PF13555.6 evalue:1.3e-06 score:27.2 best_domain_score:13.1 name:AAA_29; db:Pfam-A.hmm|PF07728.14 evalue:1.4e-05 score:24.3 best_domain_score:12.4 name:AAA_5; db:Pfam-A.hmm|PF00005.27 evalue:9.2e-56 score:187.4 best_domain_score:93.3 name:ABC_tran; db:Pfam-A.hmm|PF01935.17 evalue:8.3e-06 score:25.3 best_domain_score:13.3 name:DUF87; db:Pfam-A.hmm|PF08352.12 evalue:3.8e-36 score:122.7 best_domain_score:64.7 name:oligo_HPY;
sprot_desc Uncharacterized ABC transporter ATP-binding protein MT1318;
sprot_id sp|P9WQJ4|Y1281_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WQJ4|Y1281_MYCTO 9 600 evalue:1.1e-129 qcov:90.00 identity:44.50;
tigrfam_acc TIGR01727; TIGR02769; TIGR02770;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; nickel import ATP-binding protein NikE; nickel import ATP-binding protein NikD;
tigrfam_mainrole Transport and binding proteins; Transport and binding proteins; Transport and binding proteins;
tigrfam_name oligo_HPY; nickel_nikE; nickel_nikD;
tigrfam_sub1role Amino acids, peptides and amines; Cations and iron carrying compounds; Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:5.9e-49 score:163.2 best_domain_score:85.4 name:TIGR01727; db:TIGRFAMs.hmm|TIGR02769 evalue:3.2e-119 score:396.4 best_domain_score:229.8 name:TIGR02769; db:TIGRFAMs.hmm|TIGR02770 evalue:9.4e-124 score:410.4 best_domain_score:247.7 name:TIGR02770;
11580 12833 CDS
ID metaerg.pl|06763
allgo_ids GO:0016021; GO:0055085;
allko_ids K08219;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCA08;s__HLUCCA08 sp001314655;
genomedb_acc GCA_001314655.1;
genomedb_target db:genomedb|GCA_001314655.1|KPP91339.1 1 417 evalue:4.0e-126 qcov:100.00 identity:59.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF07690; PF12832;
pfam_desc Major Facilitator Superfamily; MFS_1 like family;
pfam_id MFS_1; MFS_1_like;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:1.9e-34 score:118.4 best_domain_score:99.8 name:MFS_1; db:Pfam-A.hmm|PF12832.7 evalue:1.6e-11 score:42.9 best_domain_score:25.3 name:MFS_1_like;
tm_num 12;
11580 12833 transmembrane_helix
ID metaerg.pl|06764
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i11604-11672o11700-11768i11802-11870o11880-11933i11991-12059o12069-12137i12246-12314o12342-12410i12444-12503o12531-12599i12636-12704o12714-12773i;
13071 12877 CDS
ID metaerg.pl|06765
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
14517 13102 CDS
ID metaerg.pl|06766
allec_ids 6.3.5.7;
allgo_ids GO:0030956; GO:0004040; GO:0005524; GO:0050567; GO:0006412;
allko_ids K02433;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Stappiaceae;g__Stappia;s__Stappia sp900185725;
genomedb_acc GCA_900185725.1;
genomedb_target db:genomedb|GCA_900185725.1|FYAU01000013.1_92 10 471 evalue:4.1e-159 qcov:98.10 identity:62.90;
kegg_pathway_id 00252; 00251;
kegg_pathway_name Alanine and aspartate metabolism; Glutamate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-5921;
metacyc_pathway_name glutaminyl-tRNAgln biosynthesis via transamidation;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging;;
pfam_acc PF01425;
pfam_desc Amidase;
pfam_id Amidase;
pfam_target db:Pfam-A.hmm|PF01425.21 evalue:5.5e-95 score:318.2 best_domain_score:318.0 name:Amidase;
sprot_desc Glutamyl-tRNA(Gln) amidotransferase subunit A;
sprot_id sp|Q5L3B3|GATA_GEOKA;
sprot_target db:uniprot_sprot|sp|Q5L3B3|GATA_GEOKA 9 471 evalue:3.2e-62 qcov:98.30 identity:34.20;
15004 15198 CDS
ID metaerg.pl|06767
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Stappiaceae;g__Stappia;s__Stappia sp900185725;
genomedb_acc GCA_900185725.1;
genomedb_target db:genomedb|GCA_900185725.1|FYAU01000013.1_100 2 64 evalue:1.3e-07 qcov:98.40 identity:47.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
15217 16629 CDS
ID metaerg.pl|06768
allec_ids 6.3.5.7;
allgo_ids GO:0030956; GO:0004040; GO:0005524; GO:0050567; GO:0006412;
allko_ids K02433;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Amorphaceae;g__Acuticoccus;s__Acuticoccus sp003258595;
genomedb_acc GCF_003258595.1;
genomedb_target db:genomedb|GCF_003258595.1|WP_111345256.1 6 461 evalue:1.5e-166 qcov:97.00 identity:65.40;
kegg_pathway_id 00252; 00251;
kegg_pathway_name Alanine and aspartate metabolism; Glutamate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-5921;
metacyc_pathway_name glutaminyl-tRNAgln biosynthesis via transamidation;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging;;
pfam_acc PF01425;
pfam_desc Amidase;
pfam_id Amidase;
pfam_target db:Pfam-A.hmm|PF01425.21 evalue:9.3e-105 score:350.4 best_domain_score:350.2 name:Amidase;
sprot_desc Glutamyl-tRNA(Gln) amidotransferase subunit A;
sprot_id sp|B8G974|GATA_CHLAD;
sprot_target db:uniprot_sprot|sp|B8G974|GATA_CHLAD 1 461 evalue:5.5e-78 qcov:98.10 identity:38.90;
16781 18115 CDS
ID metaerg.pl|06769
allec_ids 6.3.5.7;
allgo_ids GO:0030956; GO:0004040; GO:0005524; GO:0050567; GO:0006412;
allko_ids K01426; K02433;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pleomorphomonadaceae_A;g__Prosthecomicrobium;s__Prosthecomicrobium hirschii;
genomedb_acc GCF_001305515.1;
genomedb_target db:genomedb|GCF_001305515.1|WP_054359735.1 5 438 evalue:6.3e-162 qcov:97.70 identity:65.90;
kegg_pathway_id 00643; 00460; 00360; 00220; 00252; 00251; 00632; 00380;
kegg_pathway_name Styrene degradation; Cyanoamino acid metabolism; Phenylalanine metabolism; Urea cycle and metabolism of amino groups; Alanine and aspartate metabolism; Glutamate metabolism; Benzoate degradation via CoA ligation; Tryptophan metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-5921;
metacyc_pathway_name glutaminyl-tRNAgln biosynthesis via transamidation;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging;;
pfam_acc PF01425;
pfam_desc Amidase;
pfam_id Amidase;
pfam_target db:Pfam-A.hmm|PF01425.21 evalue:1.6e-70 score:237.6 best_domain_score:235.6 name:Amidase;
sprot_desc Glutamyl-tRNA(Gln) amidotransferase subunit A;
sprot_id sp|B2UZ26|GATA_CLOBA;
sprot_target db:uniprot_sprot|sp|B2UZ26|GATA_CLOBA 13 417 evalue:7.5e-37 qcov:91.20 identity:27.80;
19143 18283 CDS
ID metaerg.pl|06770
allec_ids 2.3.1.247;
allgo_ids GO:0016740; GO:0019475; GO:0046872;
allko_ids K18013;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470218.1 3 286 evalue:1.9e-143 qcov:99.30 identity:89.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF05853;
pfam_desc beta-keto acid cleavage enzyme;
pfam_id BKACE;
pfam_target db:Pfam-A.hmm|PF05853.12 evalue:5.3e-88 score:294.1 best_domain_score:293.9 name:BKACE;
sp YES;
sprot_desc 3-keto-5-aminohexanoate cleavage enzyme;
sprot_id sp|E3PRK0|KCE_ACESD;
sprot_target db:uniprot_sprot|sp|E3PRK0|KCE_ACESD 8 274 evalue:1.7e-37 qcov:93.40 identity:36.40;
18283 18345 signal_peptide
ID metaerg.pl|06771
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
19997 19140 CDS
ID metaerg.pl|06772
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470219.1 1 285 evalue:1.4e-151 qcov:100.00 identity:90.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00561; PF12697;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family;
pfam_id Abhydrolase_1; Abhydrolase_6;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:9.5e-16 score:57.4 best_domain_score:52.2 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:9.6e-15 score:55.0 best_domain_score:54.7 name:Abhydrolase_6;
20371 19994 CDS
ID metaerg.pl|06773
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470220.1 1 125 evalue:5.2e-53 qcov:100.00 identity:81.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
20607 21482 CDS
ID metaerg.pl|06774
allec_ids 1.13.11.1;
allgo_ids GO:0003824; GO:0006725; GO:0008199; GO:0055114; GO:0018576; GO:0005506; GO:0016702; GO:0019615; GO:0019614; GO:0009712;
allko_ids K03381; K04098; K00448; K00465; K00449;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470221.1 1 291 evalue:6.2e-158 qcov:100.00 identity:91.10;
kegg_pathway_id 00362; 00643; 00351; 00623; 00622; 00626; 00590; 00364; 00361;
kegg_pathway_name Benzoate degradation via hydroxylation; Styrene degradation; 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation; 2,4-Dichlorobenzoate degradation; Toluene and xylene degradation; Naphthalene and anthracene degradation; Arachidonic acid metabolism; Fluorobenzoate degradation; gamma-Hexachlorocyclohexane degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-5431; PWY-5417; CATECHOL-ORTHO-CLEAVAGE-PWY; PWY-6182; PWY-2504;
metacyc_pathway_name aromatic compounds degradation via β-ketoadipate;; catechol degradation III (ortho-cleavage pathway);; catechol degradation to β-ketoadipate;; superpathway of salicylate degradation;; superpathway of aromatic compound degradation via 3-oxoadipate;;
metacyc_pathway_type Catechol-Degradation; Super-Pathways;; Catechol-Degradation; Super-Pathways;; Catechol-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;;
pfam_acc PF00775; PF04444;
pfam_desc Dioxygenase; Catechol dioxygenase N terminus;
pfam_id Dioxygenase_C; Dioxygenase_N;
pfam_target db:Pfam-A.hmm|PF00775.21 evalue:8.3e-42 score:141.9 best_domain_score:141.5 name:Dioxygenase_C; db:Pfam-A.hmm|PF04444.14 evalue:7.8e-25 score:85.8 best_domain_score:85.1 name:Dioxygenase_N;
sprot_desc Catechol 1,2-dioxygenase;
sprot_id sp|P86029|HQD2_CANAL;
sprot_target db:uniprot_sprot|sp|P86029|HQD2_CANAL 10 260 evalue:2.1e-56 qcov:86.30 identity:43.10;
21574 22464 CDS
ID metaerg.pl|06775
allgo_ids GO:0003700; GO:0006355; GO:0003677; GO:0019439;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470240.1 1 296 evalue:1.6e-153 qcov:100.00 identity:93.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:1.2e-21 score:75.6 best_domain_score:74.5 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:1.8e-36 score:124.7 best_domain_score:124.2 name:LysR_substrate;
sprot_desc Probable cat1 operon transcriptional activator;
sprot_id sp|O33945|CATR_ACILW;
sprot_target db:uniprot_sprot|sp|O33945|CATR_ACILW 1 282 evalue:3.7e-40 qcov:95.30 identity:34.60;
23196 22495 CDS
ID metaerg.pl|06776
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015658; GO:0042941; GO:0015808;
allko_ids K02049; K01995; K10111; K01998; K05816; K01990; K02023; K11962; K05847; K02010; K02056; K01997; K02052; K02006; K02074; K02017; K01996; K06861; K02071; K10441; K02045; K11072;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470222.1 1 233 evalue:1.4e-107 qcov:100.00 identity:85.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:9.1e-08 score:31.5 best_domain_score:15.2 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.1e-34 score:119.1 best_domain_score:118.7 name:ABC_tran;
sprot_desc High-affinity branched-chain amino acid transport ATP-binding protein BraG;
sprot_id sp|P21630|BRAG_PSEAE;
sprot_target db:uniprot_sprot|sp|P21630|BRAG_PSEAE 1 232 evalue:1.7e-43 qcov:99.60 identity:41.80;
23932 23189 CDS
ID metaerg.pl|06777
allgo_ids GO:0005524; GO:0016887; GO:0006865;
allko_ids K02052; K02006; K01997; K02045; K06861; K01996; K05816; K01998; K10111; K01995; K11962; K02023; K01990;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470223.1 1 247 evalue:7.4e-128 qcov:100.00 identity:95.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:9.2e-29 score:99.9 best_domain_score:99.6 name:ABC_tran;
sprot_desc High-affinity branched-chain amino acid transport ATP-binding protein LivG;
sprot_id sp|P0A9S8|LIVG_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9S8|LIVG_ECO57 1 242 evalue:1.8e-35 qcov:98.00 identity:35.50;
24929 23925 CDS
ID metaerg.pl|06778
allgo_ids GO:0016020; GO:0022857; GO:0055085;
allko_ids K01995; K01998; K01996; K06861;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470224.1 1 334 evalue:8.1e-162 qcov:100.00 identity:90.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:7.8e-37 score:126.1 best_domain_score:125.5 name:BPD_transp_2;
tm_num 9;
24929 23925 transmembrane_helix
ID metaerg.pl|06779
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i23943-24011o24021-24089i24093-24146o24174-24233i24252-24311o24396-24464i24558-24626o24669-24737i24774-24842o;
25804 24935 CDS
ID metaerg.pl|06780
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0006865;
allko_ids K01998; K01995; K01997; K02057;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470225.1 1 289 evalue:2.8e-134 qcov:100.00 identity:92.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:1.3e-36 score:125.4 best_domain_score:125.2 name:BPD_transp_2;
sprot_desc High-affinity branched-chain amino acid transport system permease protein LivH;
sprot_id sp|P0A2J2|LIVH_SALTI;
sprot_target db:uniprot_sprot|sp|P0A2J2|LIVH_SALTI 1 284 evalue:3.5e-11 qcov:98.30 identity:25.70;
tm_num 8;
25804 24935 transmembrane_helix
ID metaerg.pl|06781
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology o24977-25045i25049-25108o25121-25189i25226-25294o25352-25420i25505-25573o25616-25684i25703-25771o;
27049 25865 CDS
ID metaerg.pl|06782
allko_ids K01999;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470226.1 1 394 evalue:7.5e-199 qcov:100.00 identity:87.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF01094; PF04348; PF13433; PF13458;
pfam_desc Receptor family ligand binding region; LppC putative lipoprotein; Periplasmic binding protein domain; Periplasmic binding protein;
pfam_id ANF_receptor; LppC; Peripla_BP_5; Peripla_BP_6;
pfam_target db:Pfam-A.hmm|PF01094.28 evalue:2.6e-14 score:52.3 best_domain_score:51.9 name:ANF_receptor; db:Pfam-A.hmm|PF04348.13 evalue:3.1e-10 score:38.7 best_domain_score:38.3 name:LppC; db:Pfam-A.hmm|PF13433.6 evalue:7.9e-24 score:83.5 best_domain_score:83.1 name:Peripla_BP_5; db:Pfam-A.hmm|PF13458.6 evalue:8.4e-76 score:255.1 best_domain_score:254.8 name:Peripla_BP_6;
sp YES;
25865 25933 signal_peptide
ID metaerg.pl|06783
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
27872 27093 CDS
ID metaerg.pl|06784
allec_ids 1.3.1.25;
allgo_ids GO:0047116; GO:0043640;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470227.1 1 259 evalue:1.1e-126 qcov:100.00 identity:90.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-2503; PWY-5183; PWY-2504;
metacyc_pathway_name benzoate degradation I (aerobic);; superpathway of aerobic toluene degradation;; superpathway of aromatic compound degradation via 3-oxoadipate;;
metacyc_pathway_type Benzoate-Degradation;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;;
pfam_acc PF00106; PF13561;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase;
pfam_id adh_short; adh_short_C2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:8.3e-50 score:168.2 best_domain_score:167.8 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.7e-48 score:163.8 best_domain_score:162.7 name:adh_short_C2;
sprot_desc 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase;
sprot_id sp|P23102|XYLL_PSEPU;
sprot_target db:uniprot_sprot|sp|P23102|XYLL_PSEPU 1 259 evalue:6.3e-76 qcov:100.00 identity:60.90;
28888 27869 CDS
ID metaerg.pl|06785
allec_ids 1.18.1.3;
allgo_ids GO:0009055; GO:0051536; GO:0051537; GO:0008860; GO:0046872; GO:0019439;
allko_ids K00245; K15765; K00235; K00366; K00517; K14581; K00507; K03380; K00326; K00380; K00491; K16161; K00240; K07519; K00529; K10616; K15758; K00226; K00360;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470228.1 1 339 evalue:1.4e-174 qcov:100.00 identity:90.00;
kegg_pathway_id 00720; 04020; 00361; 00940; 00240; 00632; 01040; 05014; 00903; 00330; 00650; 00530; 05012; 00920; 00626; 00622; 00020; 00621; 00910; 02020; 00623; 00360; 00190; 00071;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Calcium signaling pathway; gamma-Hexachlorocyclohexane degradation; Phenylpropanoid biosynthesis; Pyrimidine metabolism; Benzoate degradation via CoA ligation; Biosynthesis of unsaturated fatty acids; Amyotrophic lateral sclerosis (ALS); Limonene and pinene degradation; Arginine and proline metabolism; Butanoate metabolism; Aminosugars metabolism; Parkinson's disease; Sulfur metabolism; Naphthalene and anthracene degradation; Toluene and xylene degradation; Citrate cycle (TCA cycle); Biphenyl degradation; Nitrogen metabolism; Two-component system - General; 2,4-Dichlorobenzoate degradation; Phenylalanine metabolism; Oxidative phosphorylation; Fatty acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00970; PF00111; PF00175;
pfam_desc Oxidoreductase FAD-binding domain; 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase NAD-binding domain;
pfam_id FAD_binding_6; Fer2; NAD_binding_1;
pfam_target db:Pfam-A.hmm|PF00970.24 evalue:8.5e-17 score:60.6 best_domain_score:59.8 name:FAD_binding_6; db:Pfam-A.hmm|PF00111.27 evalue:6.6e-15 score:54.1 best_domain_score:53.3 name:Fer2; db:Pfam-A.hmm|PF00175.21 evalue:1e-19 score:70.4 best_domain_score:69.5 name:NAD_binding_1;
sprot_desc Toluate 1,2-dioxygenase electron transfer component;
sprot_id sp|P23101|XYLZ_PSEPU;
sprot_target db:uniprot_sprot|sp|P23101|XYLZ_PSEPU 3 329 evalue:1.6e-95 qcov:96.50 identity:52.00;
29479 28958 CDS
ID metaerg.pl|06786
allec_ids 1.14.12.-; 1.14.12.10;
allgo_ids GO:0006725; GO:0055114; GO:0051213; GO:0042203;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470229.1 1 173 evalue:4.4e-87 qcov:100.00 identity:87.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-6533; PWY-6217; 4TOLCARBDEG-PWY; PWY-2504; P662-PWY; DESULFONATION-PWY; PWY-2503; P661-PWY; PWY-6088; PWY-6216; PWY-5183; PWY-6550; PWY-5165;
metacyc_pathway_name aniline degradation;; 3,4-dichlorobenzoate degradation;; 4-toluenecarboxylate degradation;; superpathway of aromatic compound degradation via 3-oxoadipate;; dibenzofuran degradation;; benzenesulfonate degradation;; benzoate degradation I (aerobic);; dibenzo-p-dioxin degradation;; 3-chlorobenzoate degradation I (via chlorocatechol);; 3-chlorobenzoate degradation II (via protocatechuate);; superpathway of aerobic toluene degradation;; carbazole degradation;; 4-toluenesulfonate degradation II;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;; Chlorobenzoate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; Sulfoaromatics-Degradation;; Benzoate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; 3-Chlorobenzoate-Degradation;; 3-Chlorobenzoate-Degradation;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION;; 4-Toluenesulfonate-Degradation;;
pfam_acc PF00866;
pfam_desc Ring hydroxylating beta subunit;
pfam_id Ring_hydroxyl_B;
pfam_target db:Pfam-A.hmm|PF00866.18 evalue:5.2e-41 score:139.3 best_domain_score:139.1 name:Ring_hydroxyl_B;
sprot_desc Toluate 1,2-dioxygenase subunit beta;
sprot_id sp|P23100|XYLY_PSEPU;
sprot_target db:uniprot_sprot|sp|P23100|XYLY_PSEPU 12 173 evalue:7.0e-55 qcov:93.60 identity:60.50;
tigrfam_acc TIGR03232;
tigrfam_desc benzoate 1,2-dioxygenase, small subunit;
tigrfam_name benzo_1_2_benB;
tigrfam_target db:TIGRFAMs.hmm|TIGR03232 evalue:1.2e-75 score:251.8 best_domain_score:251.6 name:TIGR03232;
30880 29492 CDS
ID metaerg.pl|06787
allec_ids 1.14.12.10;
allgo_ids GO:0016491; GO:0051537; GO:0055114; GO:0018623; GO:0005506; GO:0043640;
allko_ids K00517; K02636; K14579; K05708; K03384; K05549; K00499;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470230.1 1 462 evalue:1.8e-268 qcov:100.00 identity:95.00;
kegg_pathway_id 00632; 00364; 00260; 00361; 00940; 00626; 00195; 00624; 00360; 00623; 00903; 00362;
kegg_pathway_name Benzoate degradation via CoA ligation; Fluorobenzoate degradation; Glycine, serine and threonine metabolism; gamma-Hexachlorocyclohexane degradation; Phenylpropanoid biosynthesis; Naphthalene and anthracene degradation; Photosynthesis; 1- and 2-Methylnaphthalene degradation; Phenylalanine metabolism; 2,4-Dichlorobenzoate degradation; Limonene and pinene degradation; Benzoate degradation via hydroxylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-2503; PWY-2504; PWY-5183;
metacyc_pathway_name benzoate degradation I (aerobic);; superpathway of aromatic compound degradation via 3-oxoadipate;; superpathway of aerobic toluene degradation;;
metacyc_pathway_type Benzoate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;;
pfam_acc PF00355; PF00848;
pfam_desc Rieske [2Fe-2S] domain; Ring hydroxylating alpha subunit (catalytic domain);
pfam_id Rieske; Ring_hydroxyl_A;
pfam_target db:Pfam-A.hmm|PF00355.26 evalue:2.2e-22 score:78.1 best_domain_score:77.2 name:Rieske; db:Pfam-A.hmm|PF00848.19 evalue:3.3e-18 score:65.7 best_domain_score:64.9 name:Ring_hydroxyl_A;
sprot_desc Benzoate 1,2-dioxygenase subunit alpha;
sprot_id sp|P07769|BENA_ACIAD;
sprot_target db:uniprot_sprot|sp|P07769|BENA_ACIAD 13 454 evalue:1.6e-178 qcov:95.70 identity:63.30;
tigrfam_acc TIGR03229;
tigrfam_desc benzoate 1,2-dioxygenase, large subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name benzo_1_2_benA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR03229 evalue:2.5e-240 score:796.9 best_domain_score:796.7 name:TIGR03229;
32069 30909 CDS
ID metaerg.pl|06788
allec_ids 5.5.1.1; 5.5.1.-;
allgo_ids GO:0018850; GO:0030145; GO:0018849; GO:0042952; GO:0009063;
allko_ids K01781; K01860; K01684; K01631; K01856;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386357.1 2 385 evalue:4.0e-189 qcov:99.50 identity:89.10;
kegg_pathway_id 00362; 00622; 00361; 00052; 00364;
kegg_pathway_name Benzoate degradation via hydroxylation; Toluene and xylene degradation; gamma-Hexachlorocyclohexane degradation; Galactose metabolism; Fluorobenzoate degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-5175; PWY-5947; PWY-5417; CATECHOL-ORTHO-CLEAVAGE-PWY; CAROTENOID-PWY; PWY-6182; PWY-2504; PWY-5431; PWY-5946; PWY-6193; PWY-5943;
metacyc_pathway_name lactucaxanthin biosynthesis;; lutein biosynthesis;; catechol degradation III (ortho-cleavage pathway);; catechol degradation to β-ketoadipate;; superpathway of carotenoid biosynthesis in plants;; superpathway of salicylate degradation;; superpathway of aromatic compound degradation via 3-oxoadipate;; aromatic compounds degradation via β-ketoadipate;; δ-carotene biosynthesis;; 3-chlorocatechol degradation II (ortho);; β-carotene biosynthesis;;
metacyc_pathway_type C40-Carotenoids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Catechol-Degradation; Super-Pathways;; Catechol-Degradation;; C40-Carotenoids-Biosynthesis; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Catechol-Degradation; Super-Pathways;; C40-Carotenoids-Biosynthesis;; 3-Chlorocatechol-Degradation;; C40-Carotenoids-Biosynthesis;;
pfam_acc PF07476; PF13378; PF02746;
pfam_desc Methylaspartate ammonia-lyase C-terminus; Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain;
pfam_id MAAL_C; MR_MLE_C; MR_MLE_N;
pfam_target db:Pfam-A.hmm|PF07476.11 evalue:0.00016 score:20.2 best_domain_score:19.5 name:MAAL_C; db:Pfam-A.hmm|PF13378.6 evalue:4.6e-48 score:162.9 best_domain_score:162.3 name:MR_MLE_C; db:Pfam-A.hmm|PF02746.16 evalue:2.6e-33 score:114.0 best_domain_score:111.8 name:MR_MLE_N;
sprot_desc Muconate cycloisomerase 1-1;
sprot_id sp|O33946|CATB1_ACILW;
sprot_target db:uniprot_sprot|sp|O33946|CATB1_ACILW 8 375 evalue:1.8e-103 qcov:95.30 identity:51.60;
tigrfam_acc TIGR02534;
tigrfam_desc muconate and chloromuconate cycloisomerases;
tigrfam_name mucon_cyclo;
tigrfam_target db:TIGRFAMs.hmm|TIGR02534 evalue:3.7e-148 score:492.6 best_domain_score:492.4 name:TIGR02534;
33469 32240 CDS
ID metaerg.pl|06789
allec_ids 1.4.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0008718; GO:0019478;
allko_ids K00285;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470232.1 1 409 evalue:1.0e-219 qcov:100.00 identity:91.70;
kegg_pathway_id 00360; 00910;
kegg_pathway_name Phenylalanine metabolism; Nitrogen metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-6422;
metacyc_pathway_name D-arginine degradation;;
metacyc_pathway_type D-Amino-Acid-Degradation;;
pfam_acc PF02558; PF01266; PF01494; PF13450; PF00070; PF07992;
pfam_desc Ketopantoate reductase PanE/ApbA; FAD dependent oxidoreductase; FAD binding domain; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id ApbA; DAO; FAD_binding_3; NAD_binding_8; Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF02558.16 evalue:3.1e-05 score:22.9 best_domain_score:19.6 name:ApbA; db:Pfam-A.hmm|PF01266.24 evalue:1.5e-60 score:204.8 best_domain_score:204.5 name:DAO; db:Pfam-A.hmm|PF01494.19 evalue:1.4e-06 score:27.0 best_domain_score:14.5 name:FAD_binding_3; db:Pfam-A.hmm|PF13450.6 evalue:4.9e-08 score:32.3 best_domain_score:30.5 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:5.2e-06 score:26.2 best_domain_score:22.4 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.7e-08 score:33.3 best_domain_score:21.5 name:Pyr_redox_2;
sp YES;
sprot_desc D-amino acid dehydrogenase 3;
sprot_id sp|Q981X2|DADA3_RHILO;
sprot_target db:uniprot_sprot|sp|Q981X2|DADA3_RHILO 1 409 evalue:7.7e-145 qcov:100.00 identity:61.60;
32240 32296 signal_peptide
ID metaerg.pl|06790
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
34190 33720 CDS
ID metaerg.pl|06791
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386353.1 1 156 evalue:1.4e-68 qcov:100.00 identity:86.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF13412; PF13463; PF09339; PF01047; PF12802;
pfam_desc Winged helix-turn-helix DNA-binding; Winged helix DNA-binding domain; IclR helix-turn-helix domain; MarR family; MarR family;
pfam_id HTH_24; HTH_27; HTH_IclR; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF13412.6 evalue:2e-08 score:32.9 best_domain_score:31.3 name:HTH_24; db:Pfam-A.hmm|PF13463.6 evalue:3.1e-08 score:33.2 best_domain_score:32.3 name:HTH_27; db:Pfam-A.hmm|PF09339.10 evalue:2.7e-06 score:26.3 best_domain_score:25.4 name:HTH_IclR; db:Pfam-A.hmm|PF01047.22 evalue:9.2e-10 score:37.6 best_domain_score:36.8 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:7.5e-12 score:44.2 best_domain_score:43.3 name:MarR_2;
34313 35506 CDS
ID metaerg.pl|06792
allec_ids 3.5.1.32;
allgo_ids GO:0016787; GO:0047980;
allko_ids K01451;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470234.1 1 386 evalue:3.3e-178 qcov:97.20 identity:81.10;
kegg_pathway_id 00360;
kegg_pathway_name Phenylalanine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:2.1e-09 score:36.5 best_domain_score:34.4 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:7.9e-29 score:100.1 best_domain_score:99.4 name:Peptidase_M20;
sprot_desc Hippurate hydrolase;
sprot_id sp|P45493|HIPO_CAMJE;
sprot_target db:uniprot_sprot|sp|P45493|HIPO_CAMJE 20 380 evalue:5.7e-52 qcov:90.90 identity:35.40;
tigrfam_acc TIGR01891;
tigrfam_desc amidohydrolase;
tigrfam_mainrole Protein fate;
tigrfam_name amidohydrolases;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01891 evalue:1.7e-84 score:283.2 best_domain_score:282.9 name:TIGR01891;
35508 36542 CDS
ID metaerg.pl|06793
allgo_ids GO:0055085; GO:0009279; GO:0046930; GO:0015288; GO:0006811;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470235.1 1 344 evalue:2.0e-171 qcov:100.00 identity:85.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:4.9e-33 score:113.9 best_domain_score:113.6 name:DctP;
sp YES;
sprot_desc Outer membrane transporter protein TsaT;
sprot_id sp|Q8KR68|TSAT_COMTE;
sprot_target db:uniprot_sprot|sp|Q8KR68|TSAT_COMTE 16 339 evalue:5.0e-28 qcov:94.20 identity:26.80;
35508 35588 signal_peptide
ID metaerg.pl|06794
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
36611 37108 CDS
ID metaerg.pl|06795
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470236.1 1 165 evalue:3.6e-70 qcov:100.00 identity:86.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:1.4e-20 score:72.8 best_domain_score:72.4 name:DctQ;
tm_num 4;
36611 37108 transmembrane_helix
ID metaerg.pl|06796
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology o36653-36721i36758-36826o36863-36931i36992-37060o;
37105 38397 CDS
ID metaerg.pl|06797
allgo_ids GO:0016021; GO:0005886; GO:0022857; GO:0015740;
allko_ids K11690;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470237.1 1 430 evalue:4.5e-205 qcov:100.00 identity:93.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:7.6e-91 score:304.2 best_domain_score:303.9 name:DctM;
sprot_desc C4-dicarboxylate TRAP transporter large permease protein DctM;
sprot_id sp|Q9HU16|DCTM_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HU16|DCTM_PSEAE 46 426 evalue:1.7e-49 qcov:88.60 identity:36.50;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:9.1e-91 score:303.7 best_domain_score:303.5 name:TIGR00786;
tm_num 11;
37105 38397 transmembrane_helix
ID metaerg.pl|06798
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology o37147-37215i37252-37320o37384-37452i37513-37581o37624-37692i37753-37812o37822-37881i37942-38010o38053-38157i38176-38244o38314-38382i;
38623 39696 CDS
ID metaerg.pl|06799
allec_ids 7.2.2.7;
allgo_ids GO:0005524; GO:0016887; GO:0043190; GO:0015408; GO:0033212;
allko_ids K10230; K02000; K11962; K10243; K09812; K02023; K02018; K10000; K10235; K05816; K11076; K01995; K02065; K02049; K02031; K10112; K01998; K10111; K02062; K02028; K11072; K02045; K02068; K06861; K02071; K01996; K10199; K11084; K02032; K02017; K01997; K02003; K02010; K05847; K02052; K02006;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480115.1 1 357 evalue:3.6e-176 qcov:100.00 identity:88.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00005; PF08402;
pfam_desc ABC transporter; TOBE domain;
pfam_id ABC_tran; TOBE_2;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:3.9e-32 score:110.9 best_domain_score:110.4 name:ABC_tran; db:Pfam-A.hmm|PF08402.10 evalue:8.5e-05 score:21.9 best_domain_score:19.6 name:TOBE_2;
sprot_desc Fe(3+) ions import ATP-binding protein FbpC;
sprot_id sp|Q2YKX3|FBPC_BRUA2;
sprot_target db:uniprot_sprot|sp|Q2YKX3|FBPC_BRUA2 8 348 evalue:1.9e-59 qcov:95.50 identity:39.40;
39718 40677 CDS
ID metaerg.pl|06800
allko_ids K02012;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480114.1 1 319 evalue:1.5e-160 qcov:100.00 identity:93.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF01547; PF13531; PF13343; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_11; SBP_bac_6; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:7.4e-09 score:35.2 best_domain_score:32.0 name:SBP_bac_1; db:Pfam-A.hmm|PF13531.6 evalue:2.1e-25 score:89.0 best_domain_score:88.7 name:SBP_bac_11; db:Pfam-A.hmm|PF13343.6 evalue:2.7e-27 score:95.0 best_domain_score:94.8 name:SBP_bac_6; db:Pfam-A.hmm|PF13416.6 evalue:1.6e-21 score:76.6 best_domain_score:76.2 name:SBP_bac_8;
sp YES;
39718 39777 signal_peptide
ID metaerg.pl|06801
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
40726 42423 CDS
ID metaerg.pl|06802
allgo_ids GO:0016020; GO:0055085;
allko_ids K02011; K10109;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480113.1 9 565 evalue:7.5e-285 qcov:98.60 identity:95.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:3.7e-21 score:74.9 best_domain_score:49.7 name:BPD_transp_1;
tm_num 12;
40726 42423 transmembrane_helix
ID metaerg.pl|06803
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i40780-40848o40948-41016i41035-41103o41161-41229i41302-41370o41482-41550i41632-41700o41812-41880i41917-41985o41998-42066i42157-42225o42325-42393i;
42428 43186 CDS
ID metaerg.pl|06804
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481963.1 1 252 evalue:1.4e-118 qcov:100.00 identity:81.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:8.8e-17 score:61.5 best_domain_score:61.1 name:Metallophos;
45569 43506 CDS
ID metaerg.pl|06805
allgo_ids GO:0000155; GO:0007165;
allko_ids K07682; K00936; K07649; K07654; K07637; K03407; K07639; K08475; K01120; K07673; K07641; K13598; K07646; K07652; K07768; K11633; K07778; K13533; K07711; K07648; K07679; K02478; K07718; K07698; K07651; K11711; K07642; K02484; K11640; K07645; K07677; K07708; K08282; K07704; K10909; K11231; K07643; K02491; K03388; K02668; K10916; K08479; K07716; K07697; K02489; K07656; K01768; K07710; K07640; K02480; K02482; K08801; K07636; K07653; K07638; K02030; K11527; K13587; K10715; K07678; K01769; K06379; K07676; K10681; K07709; K13532; K07644; K07769; K12767; K02486; K11383; K11629; K10125; K11357; K04757; K10942; K13040; K07647; K07675; K07717;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter_A;s__Pseudorhodobacter_A sp002256245;
genomedb_acc GCA_002256245.1;
genomedb_target db:genomedb|GCA_002256245.1|OYU37418.1 40 684 evalue:5.9e-268 qcov:93.90 identity:76.10;
kegg_pathway_id 00790; 05111; 00230; 04011; 02020; 03090;
kegg_pathway_name Folate biosynthesis; Vibrio cholerae pathogenic cycle; Purine metabolism; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF02518; PF00512; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:9.9e-16 score:57.5 best_domain_score:56.8 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:3.2e-08 score:32.7 best_domain_score:32.7 name:HisKA; db:Pfam-A.hmm|PF00072.24 evalue:3.9e-17 score:61.7 best_domain_score:60.7 name:Response_reg;
46110 45580 CDS
ID metaerg.pl|06806
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter_A;s__Pseudorhodobacter_A sp002256245;
genomedb_acc GCA_002256245.1;
genomedb_target db:genomedb|GCA_002256245.1|OYU37417.1 1 175 evalue:1.1e-72 qcov:99.40 identity:78.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
47445 46438 CDS
ID metaerg.pl|06807
allec_ids 5.1.3.3;
allgo_ids GO:0005975; GO:0016853; GO:0005737; GO:0004034; GO:0030246; GO:0033499; GO:0006006;
allko_ids K01785;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481727.1 1 328 evalue:5.5e-134 qcov:97.90 identity:73.50;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-6317; PWY66-373; PWY-5114; PWY-2221; NPGLUCAT-PWY;
metacyc_pathway_name D-galactose degradation I (Leloir pathway);; sucrose degradation V (sucrose α-glucosidase);; UDP-sugars interconversion;; Entner-Doudoroff pathway III (semi-phosphorylative);; Entner-Doudoroff pathway II (non-phosphorylative);;
metacyc_pathway_type GALACTOSE-DEGRADATION;; SUCROSE-DEG;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; Entner-Duodoroff-Pathways;; Entner-Duodoroff-Pathways;;
pfam_acc PF01263;
pfam_desc Aldose 1-epimerase;
pfam_id Aldose_epim;
pfam_target db:Pfam-A.hmm|PF01263.20 evalue:1.4e-75 score:253.6 best_domain_score:253.4 name:Aldose_epim;
sprot_desc Aldose 1-epimerase;
sprot_id sp|Q5EA79|GALM_BOVIN;
sprot_target db:uniprot_sprot|sp|Q5EA79|GALM_BOVIN 4 327 evalue:1.1e-56 qcov:96.70 identity:40.10;
48945 47467 CDS
ID metaerg.pl|06808
allec_ids 1.2.1.-;
allgo_ids GO:0016491; GO:0055114; GO:0047949; GO:0004777; GO:0009013; GO:0009450; GO:0019477;
allko_ids K13821; K00139; K00318; K00135; K00155; K00131; K09472; K14085; K00294; K00128;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481376.1 1 492 evalue:1.5e-252 qcov:100.00 identity:87.80;
kegg_pathway_id 00251; 00071; 00631; 00410; 00340; 00624; 00310; 00010; 00280; 00281; 00626; 00561; 00620; 00330; 00220; 00903; 00640; 00650; 00350; 00641; 00120; 00380;
kegg_pathway_name Glutamate metabolism; Fatty acid metabolism; 1,2-Dichloroethane degradation; beta-Alanine metabolism; Histidine metabolism; 1- and 2-Methylnaphthalene degradation; Lysine degradation; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation; Geraniol degradation; Naphthalene and anthracene degradation; Glycerolipid metabolism; Pyruvate metabolism; Arginine and proline metabolism; Urea cycle and metabolism of amino groups; Limonene and pinene degradation; Propanoate metabolism; Butanoate metabolism; Tyrosine metabolism; 3-Chloroacrylic acid degradation; Bile acid biosynthesis; Tryptophan metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-321; P105-PWY; PWY-6537; P41-PWY; PWY-5305; 4TOLCARBDEG-PWY; PWY-5195; ANARESP1-PWY; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; PWY-5482; PWY-5537; GLYCOLYSIS-TCA-GLYOX-BYPASS; TOLSULFDEG-PWY;
metacyc_pathway_name cutin biosynthesis;; TCA cycle IV (2-oxoglutarate decarboxylase);; 4-aminobutanoate degradation II;; pyruvate fermentation to acetate and (S)-lactate I;; bixin biosynthesis;; 4-toluenecarboxylate degradation;; artemisinin and arteannuin B biosynthesis;; ; 4-hydroxyphenylacetate degradation;; pyruvate fermentation to acetate II;; pyruvate fermentation to acetate V;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; 4-toluenesulfonate degradation I;;
metacyc_pathway_type EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; TCA-VARIANTS;; 4-Aminobutyraye-Degradation;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; APOCAROTENOID-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;; SESQUITERPENE-LACTONE;; ; AROMATIC-COMPOUNDS-DEGRADATION;; Pyruvate-Acetate-Fermentation;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Energy-Metabolism; Super-Pathways;; 4-Toluenesulfonate-Degradation;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:2.7e-165 score:549.6 best_domain_score:549.4 name:Aldedh;
sprot_desc Glutarate-semialdehyde dehydrogenase;
sprot_id sp|Q9I6M5|DAVD_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I6M5|DAVD_PSEAE 11 490 evalue:3.6e-181 qcov:97.60 identity:64.20;
tigrfam_acc TIGR01780;
tigrfam_desc succinate-semialdehyde dehydrogenase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name SSADH;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01780 evalue:9.2e-211 score:699.6 best_domain_score:699.5 name:TIGR01780;
49898 48975 CDS
ID metaerg.pl|06809
allec_ids 1.1.1.310;
allgo_ids GO:0016616; GO:0051287; GO:0055114; GO:0102155;
allko_ids K00058; K00018; K16843;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479836.1 1 306 evalue:2.1e-111 qcov:99.70 identity:69.30;
kegg_pathway_id 00260; 00630;
kegg_pathway_name Glycine, serine and threonine metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00389; PF02826; PF03446;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id 2-Hacid_dh; 2-Hacid_dh_C; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF00389.30 evalue:4.1e-26 score:90.5 best_domain_score:90.3 name:2-Hacid_dh; db:Pfam-A.hmm|PF02826.19 evalue:2.5e-56 score:189.1 best_domain_score:188.7 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF03446.15 evalue:1.3e-05 score:24.7 best_domain_score:23.9 name:NAD_binding_2;
sprot_desc (S)-sulfolactate dehydrogenase;
sprot_id sp|Q1QWN6|SLCC_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QWN6|SLCC_CHRSD 1 305 evalue:1.8e-106 qcov:99.30 identity:67.20;
tm_num 1;
49898 48975 transmembrane_helix
ID metaerg.pl|06810
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i49380-49448o;
51031 49910 CDS
ID metaerg.pl|06811
allgo_ids GO:0016491;
allko_ids K13016;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481726.1 1 373 evalue:1.2e-195 qcov:100.00 identity:89.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF01408; PF02894;
pfam_desc Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain;
pfam_id GFO_IDH_MocA; GFO_IDH_MocA_C;
pfam_target db:Pfam-A.hmm|PF01408.22 evalue:3.5e-22 score:78.7 best_domain_score:77.9 name:GFO_IDH_MocA; db:Pfam-A.hmm|PF02894.17 evalue:3.4e-13 score:48.9 best_domain_score:47.2 name:GFO_IDH_MocA_C;
51814 51059 CDS
ID metaerg.pl|06812
allec_ids 1.1.1.390;
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481725.1 2 251 evalue:5.1e-108 qcov:99.60 identity:81.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:4.6e-46 score:156.0 best_domain_score:155.7 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:4.7e-55 score:185.9 best_domain_score:185.7 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:1e-06 score:28.0 best_domain_score:26.1 name:KR;
sprot_desc Sulfoquinovose 1-dehydrogenase;
sprot_id sp|P0DOV5|SQD_PSEPU;
sprot_target db:uniprot_sprot|sp|P0DOV5|SQD_PSEPU 6 250 evalue:8.2e-73 qcov:97.60 identity:57.90;
52684 51818 CDS
ID metaerg.pl|06813
allec_ids 3.1.1.99;
allgo_ids GO:0016787; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481724.1 1 288 evalue:3.5e-145 qcov:100.00 identity:82.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF08450;
pfam_desc SMP-30/Gluconolactonase/LRE-like region;
pfam_id SGL;
pfam_target db:Pfam-A.hmm|PF08450.12 evalue:1.2e-81 score:273.2 best_domain_score:273.0 name:SGL;
sprot_desc 6-deoxy-6-sulfogluconolactonase;
sprot_id sp|P0DOV6|SGL_PSEPU;
sprot_target db:uniprot_sprot|sp|P0DOV6|SGL_PSEPU 11 288 evalue:3.1e-92 qcov:96.50 identity:56.60;
53489 52686 CDS
ID metaerg.pl|06814
allec_ids 4.1.2.58;
allgo_ids GO:0003824; GO:0016829; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481723.1 1 267 evalue:3.4e-118 qcov:100.00 identity:81.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF03328;
pfam_desc HpcH/HpaI aldolase/citrate lyase family;
pfam_id HpcH_HpaI;
pfam_target db:Pfam-A.hmm|PF03328.14 evalue:1.1e-48 score:164.5 best_domain_score:164.3 name:HpcH_HpaI;
sprot_desc 2-dehydro-3,6-dideoxy-6-sulfogluconate aldolase;
sprot_id sp|P0DOV8|KDSGA_PSEPU;
sprot_target db:uniprot_sprot|sp|P0DOV8|KDSGA_PSEPU 12 267 evalue:6.3e-63 qcov:95.90 identity:48.40;
55223 53502 CDS
ID metaerg.pl|06815
allec_ids 4.2.1.162;
allgo_ids GO:0003824; GO:0051536; GO:0016829; GO:0046872;
allko_ids K01687;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481722.1 1 573 evalue:5.4e-299 qcov:100.00 identity:89.00;
kegg_pathway_id 00770; 00290;
kegg_pathway_name Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00920;
pfam_desc Dehydratase family;
pfam_id ILVD_EDD;
pfam_target db:Pfam-A.hmm|PF00920.21 evalue:2.6e-175 score:583.2 best_domain_score:583.0 name:ILVD_EDD;
sprot_desc 6-deoxy-6-sulfo-D-gluconate dehydratase;
sprot_id sp|P0DOV7|SGD_PSEPU;
sprot_target db:uniprot_sprot|sp|P0DOV7|SGD_PSEPU 4 572 evalue:1.5e-218 qcov:99.30 identity:66.00;
55488 56033 CDS
ID metaerg.pl|06816
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482332.1 1 179 evalue:1.8e-78 qcov:98.90 identity:82.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:2.2e-25 score:88.3 best_domain_score:88.3 name:DctQ;
tm_num 4;
55488 56033 transmembrane_helix
ID metaerg.pl|06817
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i55548-55616o55659-55712i55773-55841o55884-55943i;
56038 57324 CDS
ID metaerg.pl|06818
allgo_ids GO:0016021; GO:0005886; GO:0022857; GO:0008643;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481721.1 1 428 evalue:1.6e-207 qcov:100.00 identity:94.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:9.3e-101 score:336.9 best_domain_score:336.6 name:DctM;
sprot_desc Sialic acid TRAP transporter large permease protein SiaM;
sprot_id sp|Q9KR66|SIAM_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KR66|SIAM_VIBCH 6 427 evalue:2.5e-61 qcov:98.60 identity:35.00;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:2.8e-107 score:358.1 best_domain_score:357.9 name:TIGR00786;
tm_num 11;
56038 57324 transmembrane_helix
ID metaerg.pl|06819
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i56050-56118o56161-56229i56458-56526o56554-56622i56683-56751o56761-56820i56854-56922o56950-57018i57037-57105o57133-57192i57226-57294o;
57356 58438 CDS
ID metaerg.pl|06820
allgo_ids GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481720.1 1 360 evalue:3.7e-168 qcov:100.00 identity:83.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:2.8e-56 score:190.2 best_domain_score:189.8 name:DctP;
sp YES;
57356 57454 signal_peptide
ID metaerg.pl|06821
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
58654 59736 CDS
ID metaerg.pl|06822
allgo_ids GO:0003677; GO:0006355; GO:0046177;
allko_ids K06145;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481719.1 1 359 evalue:1.3e-136 qcov:99.70 identity:71.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00356; PF00532; PF13377; PF13407;
pfam_desc Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of LacI family; Periplasmic binding protein-like domain; Periplasmic binding protein domain;
pfam_id LacI; Peripla_BP_1; Peripla_BP_3; Peripla_BP_4;
pfam_target db:Pfam-A.hmm|PF00356.21 evalue:4.8e-14 score:51.1 best_domain_score:50.2 name:LacI; db:Pfam-A.hmm|PF00532.21 evalue:3.5e-22 score:78.4 best_domain_score:78.0 name:Peripla_BP_1; db:Pfam-A.hmm|PF13377.6 evalue:2.2e-28 score:98.9 best_domain_score:98.1 name:Peripla_BP_3; db:Pfam-A.hmm|PF13407.6 evalue:3.3e-13 score:49.0 best_domain_score:48.7 name:Peripla_BP_4;
sprot_desc HTH-type transcriptional regulator GntR;
sprot_id sp|P0ACP6|GNTR_ECOL6;
sprot_target db:uniprot_sprot|sp|P0ACP6|GNTR_ECOL6 11 329 evalue:8.2e-50 qcov:88.60 identity:35.10;
61001 59790 CDS
ID metaerg.pl|06823
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481343.1 1 403 evalue:2.7e-188 qcov:100.00 identity:85.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
tm_num 10;
61001 59790 transmembrane_helix
ID metaerg.pl|06824
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i59826-59894o59979-60047i60123-60191o60234-60302i60339-60407o60435-60503i60540-60599o60657-60725i60762-60830o60873-60941i;
61209 64658 CDS
ID metaerg.pl|06825
allgo_ids GO:0005524; GO:0005737; GO:0003677; GO:0030261; GO:0006260; GO:0007062;
allko_ids K03529;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797334.1 1 1149 evalue:0.0e+00 qcov:100.00 identity:76.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF13304; PF13476; PF02463;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; RecF/RecN/SMC N terminal domain;
pfam_id AAA_21; AAA_23; SMC_N;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.3e-13 score:50.7 best_domain_score:27.1 name:AAA_21; db:Pfam-A.hmm|PF13476.6 evalue:2.5e-16 score:60.0 best_domain_score:60.0 name:AAA_23; db:Pfam-A.hmm|PF02463.19 evalue:1.2e-55 score:187.6 best_domain_score:187.2 name:SMC_N;
sprot_desc Chromosome partition protein Smc;
sprot_id sp|A3PMS2|SMC_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PMS2|SMC_RHOS1 1 1149 evalue:3.9e-210 qcov:100.00 identity:62.70;
tigrfam_acc TIGR02168;
tigrfam_desc chromosome segregation protein SMC;
tigrfam_mainrole DNA metabolism;
tigrfam_name SMC_prok_B;
tigrfam_sub1role Chromosome-associated proteins;
tigrfam_target db:TIGRFAMs.hmm|TIGR02168 evalue:1.3e-247 score:823.8 best_domain_score:818.6 name:TIGR02168;
64728 65972 CDS
ID metaerg.pl|06826
allgo_ids GO:0016021; GO:0055085;
allko_ids K08217; K08219; K08177;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797335.1 1 414 evalue:1.5e-210 qcov:100.00 identity:93.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:2.5e-38 score:131.2 best_domain_score:118.1 name:MFS_1;
tm_num 12;
64728 65972 transmembrane_helix
ID metaerg.pl|06827
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i64764-64832o64875-64943i64962-65021o65049-65117i65136-65204o65214-65282i65370-65438o65481-65549i65607-65675o65703-65771i65784-65852o65880-65939i;
67185 66010 CDS
ID metaerg.pl|06828
allgo_ids GO:0071949; GO:0005829;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470620.1 7 391 evalue:2.3e-168 qcov:98.50 identity:79.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00890; PF01494; PF03486; PF13450;
pfam_desc FAD binding domain; FAD binding domain; HI0933-like protein; NAD(P)-binding Rossmann-like domain;
pfam_id FAD_binding_2; FAD_binding_3; HI0933_like; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:9.4e-07 score:27.5 best_domain_score:25.9 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:2.7e-08 score:32.7 best_domain_score:31.1 name:FAD_binding_3; db:Pfam-A.hmm|PF03486.14 evalue:8.5e-84 score:280.8 best_domain_score:280.6 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:1.6e-05 score:24.3 best_domain_score:23.1 name:NAD_binding_8;
sprot_desc hypothetical protein;
sprot_id sp|P37631|YHIN_ECOLI;
sprot_target db:uniprot_sprot|sp|P37631|YHIN_ECOLI 5 372 evalue:5.0e-08 qcov:94.10 identity:23.20;
tigrfam_acc TIGR00275; TIGR03862;
tigrfam_desc flavoprotein, HI0933 family; flavoprotein, TIGR03862 family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00275; flavo_PP4765;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00275 evalue:1.3e-73 score:247.3 best_domain_score:247.1 name:TIGR00275; db:TIGRFAMs.hmm|TIGR03862 evalue:2.5e-139 score:463.4 best_domain_score:463.2 name:TIGR03862;
67282 68019 CDS
ID metaerg.pl|06829
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481346.1 1 245 evalue:4.0e-118 qcov:100.00 identity:88.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF03372;
pfam_desc Endonuclease/Exonuclease/phosphatase family;
pfam_id Exo_endo_phos;
pfam_target db:Pfam-A.hmm|PF03372.23 evalue:4.3e-09 score:35.5 best_domain_score:33.5 name:Exo_endo_phos;
68051 69370 CDS
ID metaerg.pl|06830
allec_ids 2.8.4.3; 2.1.1.- 2.8.1.-;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0016740; GO:0006400;
allko_ids K06168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797338.1 1 439 evalue:3.8e-228 qcov:100.00 identity:90.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF04055; PF01938; PF00919;
pfam_desc Radical SAM superfamily; TRAM domain; Uncharacterized protein family UPF0004;
pfam_id Radical_SAM; TRAM; UPF0004;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:3.8e-31 score:108.0 best_domain_score:107.2 name:Radical_SAM; db:Pfam-A.hmm|PF01938.20 evalue:3.8e-08 score:32.5 best_domain_score:31.7 name:TRAM; db:Pfam-A.hmm|PF00919.20 evalue:3.1e-32 score:109.8 best_domain_score:109.0 name:UPF0004;
sprot_desc tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase;
sprot_id sp|Q28UJ8|MIAB_JANSC;
sprot_target db:uniprot_sprot|sp|Q28UJ8|MIAB_JANSC 5 439 evalue:3.7e-193 qcov:99.10 identity:78.40;
tigrfam_acc TIGR00089; TIGR01574;
tigrfam_desc radical SAM methylthiotransferase, MiaB/RimO family; tRNA-i(6)A37 thiotransferase enzyme MiaB;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00089; miaB-methiolase;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00089 evalue:2.4e-143 score:477.2 best_domain_score:477.0 name:TIGR00089; db:TIGRFAMs.hmm|TIGR01574 evalue:5.1e-151 score:502.7 best_domain_score:502.6 name:TIGR01574;
69522 70538 CDS
ID metaerg.pl|06831
allgo_ids GO:0005524; GO:0005737;
allko_ids K06217;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657607.1 1 338 evalue:4.6e-165 qcov:100.00 identity:87.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF13245; PF13604; PF02562;
pfam_desc AAA domain; AAA domain; PhoH-like protein;
pfam_id AAA_19; AAA_30; PhoH;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:9.1e-06 score:25.3 best_domain_score:23.8 name:AAA_19; db:Pfam-A.hmm|PF13604.6 evalue:3.7e-10 score:39.1 best_domain_score:37.4 name:AAA_30; db:Pfam-A.hmm|PF02562.16 evalue:3.5e-90 score:300.2 best_domain_score:299.7 name:PhoH;
sprot_desc PhoH-like protein;
sprot_id sp|P0A9K5|PHOL_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9K5|PHOL_ECO57 20 335 evalue:3.9e-78 qcov:93.50 identity:49.70;
70531 71064 CDS
ID metaerg.pl|06832
allec_ids 3.1.-.-;
allgo_ids GO:0004222; GO:0006364; GO:0005737; GO:0004521; GO:0008270;
allko_ids K07042;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797339.1 1 177 evalue:3.1e-67 qcov:100.00 identity:74.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF02130;
pfam_desc Uncharacterized protein family UPF0054;
pfam_id UPF0054;
pfam_target db:Pfam-A.hmm|PF02130.17 evalue:4.6e-31 score:106.5 best_domain_score:106.3 name:UPF0054;
sprot_desc Endoribonuclease YbeY;
sprot_id sp|A1B8B6|YBEY_PARDP;
sprot_target db:uniprot_sprot|sp|A1B8B6|YBEY_PARDP 7 169 evalue:9.0e-42 qcov:92.10 identity:54.60;
tigrfam_acc TIGR00043;
tigrfam_desc rRNA maturation RNase YbeY;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00043;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00043 evalue:1.5e-29 score:101.5 best_domain_score:101.0 name:TIGR00043;
71080 71952 CDS
ID metaerg.pl|06833
allgo_ids GO:0005886; GO:0050660; GO:0019836; GO:0031640; GO:0009405;
allko_ids K01697; K06189;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797340.1 1 290 evalue:2.8e-134 qcov:100.00 identity:86.20;
kegg_pathway_id 00260; 00271; 00450;
kegg_pathway_name Glycine, serine and threonine metabolism; Methionine metabolism; Selenoamino acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00571; PF03471;
pfam_desc CBS domain; Transporter associated domain;
pfam_id CBS; CorC_HlyC;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:9.9e-16 score:57.2 best_domain_score:34.9 name:CBS; db:Pfam-A.hmm|PF03471.17 evalue:5.4e-17 score:60.8 best_domain_score:59.5 name:CorC_HlyC;
sprot_desc Magnesium and cobalt efflux protein CorC;
sprot_id sp|Q9KTE3|CORC_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KTE3|CORC_VIBCH 52 290 evalue:7.6e-38 qcov:82.40 identity:38.20;
71960 73510 CDS
ID metaerg.pl|06834
allec_ids 2.3.1.269; 2.3.1.-;
allgo_ids GO:0006807; GO:0016021; GO:0005886; GO:0016410; GO:0042158;
allko_ids K03820;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797341.1 10 503 evalue:1.4e-224 qcov:95.70 identity:78.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-84; THREOCAT-PWY; PWY-6438; P3-PWY; PWY-6295; PWY-6515; ECASYN-PWY; PWY-5284; PWY-6404; CENTBENZCOA-PWY; PWY-6316; PWY-5313; PWY-5140; PWY-5987; PWY-6411; PWY-5268; PWY0-881; PWY-5209; PWY-5965; PWY-5400; PWY-6318; PWY-5307; PWY-5405; PWY-5972; PWY-6412; KDO-LIPASYN-PWY; PWY-5393; PWY-5437; PWY-5981; PWY-5477; PWY-6113; PWYG-321; FASYN-INITIAL-PWY; PWY-6413; PWY1A0-6325; PWY-6432; LPSSYN-PWY; KDO-NAGLIPASYN-PWY; PWY-5184; BENZCOA-PWY; PWY-4801; PWY-6312; PWY-6442; PWY-6418; PWY-6397; PWY1-3; PWY-5080; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-6310; PWY-5139;
metacyc_pathway_name resveratrol biosynthesis;; superpathway of L-threonine metabolism;; phenylphenalenone biosynthesis;; gallate degradation III (anaerobic);; ; phloridzin biosynthesis;; enterobacterial common antigen biosynthesis;; shisonin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; cannabinoid biosynthesis;; sorgoleone biosynthesis;; ginsenoside degradation I;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; methyl-coenzyme M oxidation to CO2;; fatty acid biosynthesis initiation III;; amaranthin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; gentiodelphin biosynthesis;; superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; raspberry ketone biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; gallotannin biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; ginsenoside degradation III;; actinorhodin biosynthesis;; curcuminoid biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; superpathway of (Kdo)2-lipid A biosynthesis;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; aloesone biosynthesis I;; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; very long chain fatty acid biosynthesis I;; sophorolipid biosynthesis;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;;
metacyc_pathway_type STILBENE-PHYTOALEXINS; STILBENE-SYN;; Super-Pathways; THREONINE-DEG;; POLYKETIDE-SYN;; GALLATE-DEG;; ; FLAVONOID-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Ginsenoside-Degradation;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; METHANOGENESIS;; Fatty-acid-biosynthesis;; BETALAIN-ALKALOIDS;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; Ginsenoside-Degradation;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; GALLOTANNINS;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOID-DEG;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; POLYKETIDE-SYN;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; Cell-Wall-Biosynthesis;; Storage-Compounds-Biosynthesis;; Fatty-acid-biosynthesis;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;;
pfam_acc PF00795;
pfam_desc Carbon-nitrogen hydrolase;
pfam_id CN_hydrolase;
pfam_target db:Pfam-A.hmm|PF00795.22 evalue:4.7e-24 score:84.3 best_domain_score:83.7 name:CN_hydrolase;
sprot_desc Apolipoprotein N-acyltransferase;
sprot_id sp|B9JZJ6|LNT_AGRVS;
sprot_target db:uniprot_sprot|sp|B9JZJ6|LNT_AGRVS 9 496 evalue:3.4e-65 qcov:94.60 identity:35.90;
tigrfam_acc TIGR00546;
tigrfam_desc apolipoprotein N-acyltransferase;
tigrfam_mainrole Protein fate;
tigrfam_name lnt;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00546 evalue:1.1e-78 score:264.4 best_domain_score:263.9 name:TIGR00546;
tm_num 8;
71960 73510 transmembrane_helix
ID metaerg.pl|06835
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i71996-72049o72059-72112i72131-72199o72242-72310i72329-72388o72446-72514i72533-72592o73406-73465i;
74757 73450 CDS
ID metaerg.pl|06836
allec_ids 2.4.2.4;
allgo_ids GO:0016757; GO:0004645; GO:0016154; GO:0009032; GO:0006206; GO:0046104;
allko_ids K00766; K00758; K00756; K13497;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797342.1 1 435 evalue:4.7e-186 qcov:100.00 identity:79.10;
kegg_pathway_id 00230; 00400; 00240; 02020; 00983;
kegg_pathway_name Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism; Two-component system - General; Drug metabolism - other enzymes;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY0-1298; PWY0-181; P1-PWY;
metacyc_pathway_name superpathway of pyrimidine deoxyribonucleosides degradation;; ; ;
metacyc_pathway_type Pyrimidine-Degradation; Super-Pathways;; ; ;
pfam_acc PF00591; PF02885; PF07831;
pfam_desc Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; Pyrimidine nucleoside phosphorylase C-terminal domain;
pfam_id Glycos_transf_3; Glycos_trans_3N; PYNP_C;
pfam_target db:Pfam-A.hmm|PF00591.21 evalue:8e-35 score:119.9 best_domain_score:119.4 name:Glycos_transf_3; db:Pfam-A.hmm|PF02885.17 evalue:8.1e-18 score:63.3 best_domain_score:63.3 name:Glycos_trans_3N; db:Pfam-A.hmm|PF07831.13 evalue:1.9e-19 score:68.3 best_domain_score:67.3 name:PYNP_C;
sprot_desc Thymidine phosphorylase;
sprot_id sp|Q98GV5|TYPH_RHILO;
sprot_target db:uniprot_sprot|sp|Q98GV5|TYPH_RHILO 1 432 evalue:7.0e-128 qcov:99.30 identity:60.60;
tigrfam_acc TIGR02643; TIGR02644;
tigrfam_desc thymidine phosphorylase; pyrimidine-nucleoside phosphorylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides; Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name T_phosphoryl; Y_phosphoryl;
tigrfam_sub1role Other; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02643 evalue:4.6e-186 score:618.1 best_domain_score:617.9 name:TIGR02643; db:TIGRFAMs.hmm|TIGR02644 evalue:1.3e-147 score:491.1 best_domain_score:490.9 name:TIGR02644;
74843 75247 CDS
ID metaerg.pl|06837
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797410.1 1 134 evalue:8.3e-49 qcov:100.00 identity:79.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF03061;
pfam_desc Thioesterase superfamily;
pfam_id 4HBT;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:3.6e-14 score:52.1 best_domain_score:51.7 name:4HBT;
tigrfam_acc TIGR00369;
tigrfam_desc uncharacterized domain 1;
tigrfam_name unchar_dom_1;
tigrfam_target db:TIGRFAMs.hmm|TIGR00369 evalue:5.5e-16 score:57.9 best_domain_score:57.6 name:TIGR00369;
75309 76211 CDS
ID metaerg.pl|06838
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797343.1 1 300 evalue:1.7e-126 qcov:100.00 identity:81.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:3e-33 score:114.1 best_domain_score:63.4 name:EamA;
tm_num 10;
75309 76211 transmembrane_helix
ID metaerg.pl|06839
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
topology i75327-75395o75423-75491i75510-75578o75591-75659i75693-75761o75774-75833i75852-75920o75963-76022i76059-76112o76122-76175i;
76225 76887 CDS
ID metaerg.pl|06840
allec_ids 3.4.-.-;
allgo_ids GO:0003677; GO:0008233; GO:0009432;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469768.1 1 219 evalue:3.3e-95 qcov:99.50 identity:75.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF02586;
pfam_desc SOS response associated peptidase (SRAP);
pfam_id SRAP;
pfam_target db:Pfam-A.hmm|PF02586.14 evalue:8e-62 score:207.9 best_domain_score:207.7 name:SRAP;
sprot_desc SOS response-associated protein YoqW;
sprot_id sp|O31916|YOQW_BACSU;
sprot_target db:uniprot_sprot|sp|O31916|YOQW_BACSU 1 177 evalue:1.3e-29 qcov:80.50 identity:36.50;
78000 76915 CDS
ID metaerg.pl|06841
allec_ids 3.6.-.-;
allgo_ids GO:0005524; GO:0005737; GO:0031966; GO:0005739; GO:0016887; GO:0006123; GO:0035694; GO:0007005;
allko_ids K18798;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482234.1 1 359 evalue:1.7e-173 qcov:99.40 identity:85.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF03969;
pfam_desc AFG1-like ATPase;
pfam_id AFG1_ATPase;
pfam_target db:Pfam-A.hmm|PF03969.16 evalue:1.9e-111 score:371.7 best_domain_score:371.5 name:AFG1_ATPase;
sprot_desc AFG1-like ATPase;
sprot_id sp|Q3V384|AFG1L_MOUSE;
sprot_target db:uniprot_sprot|sp|Q3V384|AFG1L_MOUSE 6 354 evalue:3.7e-58 qcov:96.70 identity:35.60;
78116 78961 CDS
ID metaerg.pl|06842
allec_ids 2.8.1.1;
allgo_ids GO:0009507; GO:0005739; GO:0016784; GO:0016783; GO:0004792; GO:0009793;
allko_ids K04564; K01011; K01007;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470892.1 1 281 evalue:7.1e-151 qcov:100.00 identity:90.40;
kegg_pathway_id 00272; 00620; 00720;
kegg_pathway_name Cysteine metabolism; Pyruvate metabolism; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-5350;
metacyc_pathway_name thiosulfate disproportionation IV (rhodanese);;
metacyc_pathway_type Thiosulfate-Disproportionation;;
pfam_acc PF00581;
pfam_desc Rhodanese-like domain;
pfam_id Rhodanese;
pfam_target db:Pfam-A.hmm|PF00581.20 evalue:1.9e-30 score:104.8 best_domain_score:61.5 name:Rhodanese;
sprot_desc Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial;
sprot_id sp|O64530|STR1_ARATH;
sprot_target db:uniprot_sprot|sp|O64530|STR1_ARATH 7 280 evalue:2.2e-66 qcov:97.50 identity:41.40;
78958 79518 CDS
ID metaerg.pl|06843
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246869.1 1 183 evalue:1.4e-83 qcov:98.40 identity:78.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
79525 80706 CDS
ID metaerg.pl|06844
allec_ids 2.6.1.57;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0080130; GO:0009073;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797345.1 1 393 evalue:1.0e-176 qcov:100.00 identity:81.90;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id BENZCOA-PWY; PHESYN; PWY3O-4108; ALL-CHORISMATE-PWY; PWY-5079; COMPLETE-ARO-PWY; TYRSYN;
metacyc_pathway_name anaerobic aromatic compound degradation (Thauera aromatica);; L-phenylalanine biosynthesis I;; L-tyrosine degradation III;; superpathway of chorismate metabolism;; L-phenylalanine degradation III;; superpathway of aromatic amino acid biosynthesis;; L-tyrosine biosynthesis I;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; PHENYLALANINE-SYN;; TYROSINE-DEG;; Super-Pathways;; PHENYLALANINE-DEG;; Amino-Acid-Biosynthesis; Super-Pathways;; TYROSINE-SYN;;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1.9e-65 score:220.7 best_domain_score:220.5 name:Aminotran_1_2;
sprot_desc Aromatic-amino-acid aminotransferase;
sprot_id sp|P95468|TYRB_PARDE;
sprot_target db:uniprot_sprot|sp|P95468|TYRB_PARDE 11 391 evalue:1.3e-104 qcov:96.90 identity:50.50;
81435 80653 CDS
ID metaerg.pl|06845
allec_ids 2.7.8.7;
allgo_ids GO:0000287; GO:0008897; GO:0009366; GO:0009239;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicibacter;s__Tropicibacter naphthalenivorans;
genomedb_acc GCF_900176475.1;
genomedb_target db:genomedb|GCF_900176475.1|WP_058248749.1 10 241 evalue:1.0e-39 qcov:89.20 identity:44.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-6012;
metacyc_pathway_name acyl carrier protein metabolism;;
metacyc_pathway_type Cofactor-Biosynthesis; Interconversion;;
pfam_acc PF17837; PF01648;
pfam_desc 4'-phosphopantetheinyl transferase N-terminal domain; 4'-phosphopantetheinyl transferase superfamily;
pfam_id 4PPT_N; ACPS;
pfam_target db:Pfam-A.hmm|PF17837.1 evalue:3.5e-18 score:64.7 best_domain_score:63.2 name:4PPT_N; db:Pfam-A.hmm|PF01648.20 evalue:3.8e-10 score:39.2 best_domain_score:38.6 name:ACPS;
sprot_desc 4'-phosphopantetheinyl transferase Svp;
sprot_id sp|Q9F0Q6|PPTA_STRMB;
sprot_target db:uniprot_sprot|sp|Q9F0Q6|PPTA_STRMB 57 253 evalue:1.0e-09 qcov:75.80 identity:32.00;
81748 89133 CDS
ID metaerg.pl|06846
allec_ids 2.3.1.41;
allgo_ids GO:0055114; GO:0034081; GO:0004315; GO:0016491; GO:0031177; GO:0071766; GO:0006633; GO:0097041; GO:0097040;
allko_ids K00001;
genomedb_OC d__Bacteria;p__Eremiobacterota;c__Eremiobacteria;o__UBP12;f__UBA5184;g__BOG-1502;s__BOG-1502 sp003134035;
genomedb_acc GCA_003134035.1;
genomedb_target db:genomedb|GCA_003134035.1|PLAE01000221.1_22 20 2453 evalue:0.0e+00 qcov:98.90 identity:55.00;
kegg_pathway_id 00641; 00010; 00624; 00120; 00350; 00071;
kegg_pathway_name 3-Chloroacrylic acid degradation; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; Bile acid biosynthesis; Tyrosine metabolism; Fatty acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-5989; PWYG-321; BIOTIN-BIOSYNTHESIS-PWY; FASYN-INITIAL-PWY; PWY-6113; PWY-6285; PWY-6282; PWY0-881; PWY-5965; PWY-5966; PWY-5971; PWY-5156; FASYN-ELONG-PWY; PWY-6519;
metacyc_pathway_name stearate biosynthesis II (bacteria and plants);; mycolate biosynthesis;; biotin biosynthesis I;; superpathway of fatty acid biosynthesis initiation (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate);; superpathway of fatty acid biosynthesis I (E. coli);; fatty acid biosynthesis initiation III;; fatty acid biosynthesis initiation II;; palmitate biosynthesis II (bacteria and plants);; superpathway of fatty acid biosynthesis II (plant);; fatty acid elongation -- saturated;; 8-amino-7-oxononanoate biosynthesis I;;
metacyc_pathway_type Stearate-Biosynthesis;; Fatty-acid-biosynthesis;; BIOTIN-SYN; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Palmitoleate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis;; Palmitate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;;
pfam_acc PF00698; PF08240; PF00106; PF13561; PF00107; PF13602; PF16197; PF00109; PF02801; PF08659; PF08242; PF00550; PF14765;
pfam_desc Acyl transferase domain; Alcohol dehydrogenase GroES-like domain; short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase; Ketoacyl-synthetase C-terminal extension; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; KR domain; Methyltransferase domain; Phosphopantetheine attachment site; Polyketide synthase dehydratase;
pfam_id Acyl_transf_1; ADH_N; adh_short; adh_short_C2; ADH_zinc_N; ADH_zinc_N_2; KAsynt_C_assoc; ketoacyl-synt; Ketoacyl-synt_C; KR; Methyltransf_12; PP-binding; PS-DH;
pfam_target db:Pfam-A.hmm|PF00698.21 evalue:4.6e-61 score:206.3 best_domain_score:205.1 name:Acyl_transf_1; db:Pfam-A.hmm|PF08240.12 evalue:2.8e-07 score:29.6 best_domain_score:28.4 name:ADH_N; db:Pfam-A.hmm|PF00106.25 evalue:2.2e-17 score:62.4 best_domain_score:59.7 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:9.2e-11 score:41.0 best_domain_score:41.0 name:adh_short_C2; db:Pfam-A.hmm|PF00107.26 evalue:1e-20 score:73.3 best_domain_score:68.7 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:9.3e-22 score:77.7 best_domain_score:70.0 name:ADH_zinc_N_2; db:Pfam-A.hmm|PF16197.5 evalue:1.5e-18 score:66.5 best_domain_score:65.1 name:KAsynt_C_assoc; db:Pfam-A.hmm|PF00109.26 evalue:6e-87 score:290.6 best_domain_score:287.4 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:1.3e-39 score:134.0 best_domain_score:131.4 name:Ketoacyl-synt_C; db:Pfam-A.hmm|PF08659.10 evalue:1.2e-62 score:210.3 best_domain_score:208.7 name:KR; db:Pfam-A.hmm|PF08242.12 evalue:1.6e-08 score:34.5 best_domain_score:32.8 name:Methyltransf_12; db:Pfam-A.hmm|PF00550.25 evalue:5.1e-15 score:54.8 best_domain_score:52.8 name:PP-binding; db:Pfam-A.hmm|PF14765.6 evalue:5.2e-56 score:189.3 best_domain_score:188.4 name:PS-DH;
sprot_desc Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsC;
sprot_id sp|Q7TXL8|PPSC_MYCBO;
sprot_target db:uniprot_sprot|sp|Q7TXL8|PPSC_MYCBO 20 2420 evalue:1.4e-273 qcov:97.60 identity:31.50;
89350 89267 tRNA
ID metaerg.pl|06847
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
name tRNA_Tyr_gta;
89462 90241 CDS
ID metaerg.pl|06848
allec_ids 2.1.1.185;
allgo_ids GO:0003723; GO:0006396; GO:0008173; GO:0005829; GO:0070039; GO:0000453; GO:0009451;
allko_ids K03218;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797028.1 1 259 evalue:6.8e-132 qcov:100.00 identity:93.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00588; PF08032;
pfam_desc SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding;
pfam_id SpoU_methylase; SpoU_sub_bind;
pfam_target db:Pfam-A.hmm|PF00588.19 evalue:5.2e-33 score:113.4 best_domain_score:111.4 name:SpoU_methylase; db:Pfam-A.hmm|PF08032.12 evalue:3.7e-08 score:32.8 best_domain_score:31.5 name:SpoU_sub_bind;
sprot_desc 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB;
sprot_id sp|Q9KNY2|RLMB_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KNY2|RLMB_VIBCH 24 255 evalue:7.0e-27 qcov:89.60 identity:36.10;
tigrfam_acc TIGR00186;
tigrfam_desc RNA methyltransferase, TrmH family, group 3;
tigrfam_mainrole Protein synthesis;
tigrfam_name rRNA_methyl_3;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00186 evalue:1.5e-47 score:161.3 best_domain_score:161.0 name:TIGR00186;
90238 91140 CDS
ID metaerg.pl|06849
allec_ids 5.1.3.3;
allgo_ids GO:0005975; GO:0016853; GO:0042597; GO:0004034; GO:0030246; GO:0019318;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797027.1 1 297 evalue:5.4e-125 qcov:99.00 identity:71.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-2221; NPGLUCAT-PWY; PWY-6317; PWY66-373; PWY-5114;
metacyc_pathway_name Entner-Doudoroff pathway III (semi-phosphorylative);; Entner-Doudoroff pathway II (non-phosphorylative);; D-galactose degradation I (Leloir pathway);; sucrose degradation V (sucrose α-glucosidase);; UDP-sugars interconversion;;
metacyc_pathway_type Entner-Duodoroff-Pathways;; Entner-Duodoroff-Pathways;; GALACTOSE-DEGRADATION;; SUCROSE-DEG;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;;
pfam_acc PF01263;
pfam_desc Aldose 1-epimerase;
pfam_id Aldose_epim;
pfam_target db:Pfam-A.hmm|PF01263.20 evalue:3.5e-46 score:157.1 best_domain_score:156.9 name:Aldose_epim;
sprot_desc Aldose 1-epimerase;
sprot_id sp|P05149|GALM_ACICA;
sprot_target db:uniprot_sprot|sp|P05149|GALM_ACICA 49 298 evalue:7.9e-22 qcov:83.30 identity:28.60;
91143 91694 CDS
ID metaerg.pl|06850
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797026.1 4 183 evalue:3.4e-53 qcov:98.40 identity:62.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF10973;
pfam_desc Protein of unknown function (DUF2799);
pfam_id DUF2799;
pfam_target db:Pfam-A.hmm|PF10973.8 evalue:1.4e-20 score:72.7 best_domain_score:72.3 name:DUF2799;
sp YES;
91143 91184 lipoprotein_signal_peptide
ID metaerg.pl|06851
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
92271 91678 CDS
ID metaerg.pl|06852
allec_ids 6.3.4.13; 6.3.3.1; 2.1.2.2;
allgo_ids GO:0009058; GO:0016742; GO:0005829; GO:0005524; GO:0046872; GO:0004637; GO:0004641; GO:0004644; GO:0006189; GO:0046084; GO:0009113; GO:0006164;
allko_ids K11175; K01945; K11788; K00601; K01933; K11787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797025.1 1 197 evalue:1.2e-91 qcov:100.00 identity:87.30;
kegg_pathway_id 00230; 00670;
kegg_pathway_name Purine metabolism; One carbon pool by folate;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-6277; DENOVOPURINE2-PWY; PWY-841; PRPP-PWY; PWY-6122; FOLSYN-PWY; PWY-6121; ALL-CHORISMATE-PWY;
metacyc_pathway_name superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of tetrahydrofolate biosynthesis and salvage;; 5-aminoimidazole ribonucleotide biosynthesis I;; superpathway of chorismate metabolism;;
metacyc_pathway_type AIR-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; AIR-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; Super-Pathways;;
pfam_acc PF00551;
pfam_desc Formyl transferase;
pfam_id Formyl_trans_N;
pfam_target db:Pfam-A.hmm|PF00551.19 evalue:9.6e-53 score:177.8 best_domain_score:177.7 name:Formyl_trans_N;
sp YES;
sprot_desc Trifunctional purine biosynthetic protein adenosine-3;
sprot_id sp|P00967|PUR2_DROME;
sprot_target db:uniprot_sprot|sp|P00967|PUR2_DROME 4 189 evalue:2.3e-38 qcov:94.40 identity:47.90;
tigrfam_acc TIGR00639;
tigrfam_desc phosphoribosylglycinamide formyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name PurN;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00639 evalue:4.8e-61 score:204.8 best_domain_score:204.5 name:TIGR00639;
91678 91737 signal_peptide
ID metaerg.pl|06853
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
93410 92268 CDS
ID metaerg.pl|06854
allec_ids 6.3.3.1;
allgo_ids GO:0005737; GO:0005524; GO:0004641; GO:0006189;
allko_ids K11788; K01933; K11787; K11175; K01945;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797024.1 33 379 evalue:1.2e-172 qcov:91.30 identity:90.80;
kegg_pathway_id 00230; 00670;
kegg_pathway_name Purine metabolism; One carbon pool by folate;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
metacyc_pathway_id PWY-6122; DENOVOPURINE2-PWY; PWY-6121; PWY-841; PWY-6277; PRPP-PWY;
metacyc_pathway_name 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type AIR-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF00586; PF02769;
pfam_desc AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain;
pfam_id AIRS; AIRS_C;
pfam_target db:Pfam-A.hmm|PF00586.24 evalue:6.6e-16 score:58.0 best_domain_score:56.8 name:AIRS; db:Pfam-A.hmm|PF02769.22 evalue:1.5e-38 score:131.6 best_domain_score:130.8 name:AIRS_C;
sprot_desc Phosphoribosylformylglycinamidine cyclo-ligase;
sprot_id sp|Q28RA9|PUR5_JANSC;
sprot_target db:uniprot_sprot|sp|Q28RA9|PUR5_JANSC 38 379 evalue:3.0e-151 qcov:90.00 identity:78.70;
tigrfam_acc TIGR00878;
tigrfam_desc phosphoribosylformylglycinamidine cyclo-ligase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purM;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00878 evalue:5.2e-127 score:422.8 best_domain_score:422.6 name:TIGR00878;
93455 94342 CDS
ID metaerg.pl|06855
allec_ids 3.-.-.-;
allgo_ids GO:0016787; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCA08;s__HLUCCA08 sp003129565;
genomedb_acc GCF_003129565.1;
genomedb_target db:genomedb|GCF_003129565.1|WP_109386312.1 4 295 evalue:1.3e-142 qcov:99.00 identity:81.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0193431; 214.705; 0.409006; 215.658; 0.524948;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:1.2e-20 score:73.6 best_domain_score:72.9 name:Lactamase_B;
sprot_desc Beta-lactamase hydrolase-like protein;
sprot_id sp|Q8UAA9|BLH_AGRFC;
sprot_target db:uniprot_sprot|sp|Q8UAA9|BLH_AGRFC 5 293 evalue:1.4e-92 qcov:98.00 identity:56.70;
>Feature NODE_44_length_94246_cov_47.8684
795 1 CDS
ID metaerg.pl|06856
allec_ids 2.3.1.234;
allgo_ids GO:0005737; GO:0005506; GO:0004222; GO:0061711; GO:0002949;
allko_ids K01409;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194869.1 1 265 evalue:3.8e-138 qcov:100.00 identity:95.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00814;
pfam_desc Glycoprotease family;
pfam_id Peptidase_M22;
pfam_target db:Pfam-A.hmm|PF00814.25 evalue:1.6e-81 score:273.3 best_domain_score:273.1 name:Peptidase_M22;
sprot_desc tRNA N6-adenosine threonylcarbamoyltransferase;
sprot_id sp|B2J588|TSAD_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J588|TSAD_NOSP7 1 265 evalue:2.0e-130 qcov:100.00 identity:88.70;
tigrfam_acc TIGR00329; TIGR03723;
tigrfam_desc metallohydrolase, glycoprotease/Kae1 family; tRNA threonylcarbamoyl adenosine modification protein TsaD;
tigrfam_mainrole Protein fate; Protein synthesis;
tigrfam_name gcp_kae1; T6A_TsaD_YgjD;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides; tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00329 evalue:1.2e-93 score:312.9 best_domain_score:312.8 name:TIGR00329; db:TIGRFAMs.hmm|TIGR03723 evalue:4.2e-107 score:357.1 best_domain_score:356.9 name:TIGR03723;
973 1467 CDS
ID metaerg.pl|06857
allgo_ids GO:0009522; GO:0009538; GO:0015979; GO:0016021; GO:0042651;
allko_ids K02694;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194868.1 1 164 evalue:9.4e-87 qcov:100.00 identity:98.80;
kegg_pathway_id 00195;
kegg_pathway_name Photosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF02507;
pfam_desc Photosystem I reaction centre subunit III;
pfam_id PSI_PsaF;
pfam_target db:Pfam-A.hmm|PF02507.15 evalue:7.2e-48 score:161.9 best_domain_score:146.1 name:PSI_PsaF;
sp YES;
sprot_desc Photosystem I reaction center subunit III;
sprot_id sp|P31091|PSAF_ANAVT;
sprot_target db:uniprot_sprot|sp|P31091|PSAF_ANAVT 1 164 evalue:1.0e-79 qcov:100.00 identity:89.00;
tm_num 2;
973 1041 signal_peptide
ID metaerg.pl|06858
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
973 1467 transmembrane_helix
ID metaerg.pl|06859
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology i991-1059o1228-1296i;
1912 2433 CDS
ID metaerg.pl|06860
allgo_ids GO:0009522; GO:0009538; GO:0015979; GO:0016021; GO:0042651;
allko_ids K02699;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194866.1 1 173 evalue:7.6e-87 qcov:100.00 identity:94.20;
kegg_pathway_id 00195;
kegg_pathway_name Photosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF02605;
pfam_desc Photosystem I reaction centre subunit XI;
pfam_id PsaL;
pfam_target db:Pfam-A.hmm|PF02605.15 evalue:6.1e-64 score:213.4 best_domain_score:213.2 name:PsaL;
sprot_desc Photosystem I reaction center subunit XI;
sprot_id sp|B2J591|PSAL_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J591|PSAL_NOSP7 1 173 evalue:1.5e-78 qcov:100.00 identity:84.40;
tm_num 2;
1912 2433 transmembrane_helix
ID metaerg.pl|06861
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology i2182-2250o2347-2415i;
3210 2614 CDS
ID metaerg.pl|06862
allec_ids 2.7.4.8;
allgo_ids GO:0005737; GO:0005524; GO:0004385;
allko_ids K00942;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094007.1 1 198 evalue:6.6e-95 qcov:100.00 identity:91.40;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6125; P1-PWY; PRPP-PWY;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of guanosine nucleotides de novo biosynthesis II;; ; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; ; Super-Pathways;;
pfam_acc PF00625;
pfam_desc Guanylate kinase;
pfam_id Guanylate_kin;
pfam_target db:Pfam-A.hmm|PF00625.21 evalue:7.5e-54 score:181.4 best_domain_score:181.1 name:Guanylate_kin;
sprot_desc Guanylate kinase;
sprot_id sp|Q3MD38|KGUA_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MD38|KGUA_ANAVT 1 198 evalue:1.5e-85 qcov:100.00 identity:80.80;
tigrfam_acc TIGR03263;
tigrfam_desc guanylate kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name guanyl_kin;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR03263 evalue:5.8e-73 score:243.5 best_domain_score:243.2 name:TIGR03263;
3829 3563 CDS
ID metaerg.pl|06863
allko_ids K09777;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp001597745;
genomedb_acc GCF_001597745.1;
genomedb_target db:genomedb|GCF_001597745.1|WP_066381562.1 1 88 evalue:5.1e-39 qcov:100.00 identity:97.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF04025;
pfam_desc Domain of unknown function (DUF370);
pfam_id DUF370;
pfam_target db:Pfam-A.hmm|PF04025.12 evalue:1.5e-37 score:126.8 best_domain_score:126.6 name:DUF370;
sprot_desc Putative regulatory protein Npun_R3866;
sprot_id sp|B2J593|Y3866_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J593|Y3866_NOSP7 1 88 evalue:3.2e-40 qcov:100.00 identity:96.60;
4553 5233 CDS
ID metaerg.pl|06864
allec_ids 3.1.26.3;
allgo_ids GO:0004525; GO:0006396; GO:0005737; GO:0046872; GO:0019843; GO:0006397; GO:0016075; GO:0006364; GO:0008033;
allko_ids K03685;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194862.1 1 226 evalue:9.2e-109 qcov:100.00 identity:87.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00035; PF00636; PF14622;
pfam_desc Double-stranded RNA binding motif; Ribonuclease III domain; Ribonuclease-III-like;
pfam_id dsrm; Ribonuclease_3; Ribonucleas_3_3;
pfam_target db:Pfam-A.hmm|PF00035.26 evalue:3.8e-14 score:52.4 best_domain_score:51.6 name:dsrm; db:Pfam-A.hmm|PF00636.26 evalue:8.1e-18 score:64.2 best_domain_score:63.2 name:Ribonuclease_3; db:Pfam-A.hmm|PF14622.6 evalue:4.5e-30 score:103.7 best_domain_score:103.1 name:Ribonucleas_3_3;
sprot_desc Ribonuclease 3 1;
sprot_id sp|Q8Z023|RNC1_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8Z023|RNC1_NOSS1 1 226 evalue:2.1e-83 qcov:100.00 identity:67.40;
tigrfam_acc TIGR02191;
tigrfam_desc ribonuclease III;
tigrfam_mainrole Transcription;
tigrfam_name RNaseIII;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR02191 evalue:5.6e-64 score:214.8 best_domain_score:214.6 name:TIGR02191;
7599 5278 CDS
ID metaerg.pl|06865
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094006.1 31 773 evalue:0.0e+00 qcov:96.10 identity:93.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF11992; PF13559; PF01841;
pfam_desc Domain of unknown function (DUF3488); Domain of unknown function (DUF4129); Transglutaminase-like superfamily;
pfam_id DUF3488; DUF4129; Transglut_core;
pfam_target db:Pfam-A.hmm|PF11992.8 evalue:1.5e-07 score:29.9 best_domain_score:28.4 name:DUF3488; db:Pfam-A.hmm|PF13559.6 evalue:2e-12 score:46.4 best_domain_score:45.5 name:DUF4129; db:Pfam-A.hmm|PF01841.19 evalue:1.2e-19 score:70.0 best_domain_score:69.0 name:Transglut_core;
tm_num 7;
7599 5278 transmembrane_helix
ID metaerg.pl|06866
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology i5377-5445o5527-5595i5686-5739o5752-5820i5881-5949o7129-7197i7216-7284o;
8981 8169 CDS
ID metaerg.pl|06867
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194860.1 1 270 evalue:4.4e-134 qcov:100.00 identity:90.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
10362 9142 CDS
ID metaerg.pl|06868
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092348.1 1 406 evalue:9.0e-224 qcov:100.00 identity:98.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
10571 11044 CDS
ID metaerg.pl|06869
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094005.1 1 157 evalue:3.2e-76 qcov:100.00 identity:93.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
12103 11132 CDS
ID metaerg.pl|06870
allec_ids 2.5.1.-;
allgo_ids GO:0008299; GO:0046872; GO:0016740; GO:0015979;
allko_ids K00805; K02523; K05356;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092347.1 1 323 evalue:1.6e-170 qcov:100.00 identity:97.80;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id PWY-4502; PWY-5064; PWY-5838; PWY-5899; PWY-6520; PWY-5134; PWY-5817; PWY-6403; PWY-5864; PWY-5133; PWY-6129; PWY-6383; PWY-5893; PWY-5027; PWY-6262; PWY-5861; PWY-724; PWY-5783; PWY-5805; POLYISOPRENSYN-PWY; PWY-5897; PWY-5808; PWY-5132; PWY-6263; PWY-5898; PWY-5863; PWY-5816; PWY-5862; PWY-5845; PWY-5896; PWY-2681; PWY-5068; PWY-5701; PWY-5140; PWY-5135; PWY-5806; PWY-6404;
metacyc_pathway_name wighteone and luteone biosynthesis;; chlorophyll a biosynthesis II;; superpathway of menaquinol-8 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; nonaprenyl diphosphate biosynthesis II;; superpathway of bitter acids biosynthesis;; dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;; superpathway of plastoquinol biosynthesis;; colupulone and cohumulone biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; tridecaprenyl diphosphate biosynthesis;; phylloquinol biosynthesis;; demethylmenaquinol-8 biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; octaprenyl diphosphate biosynthesis;; nonaprenyl diphosphate biosynthesis I;; polyisoprenoid biosynthesis (E. coli);; superpathway of menaquinol-11 biosynthesis;; hyperforin and adhyperforin biosynthesis;; lupulone and humulone biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; superpathway of menaquinol-12 biosynthesis;; superpathway of phylloquinol biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; trans-zeatin biosynthesis;; chlorophyll cycle;; shikonin biosynthesis;; cannabinoid biosynthesis;; xanthohumol biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Lipid-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Demethylmenaquinol-8-Biosynthesis;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; CYTOKININ-BIOSYNTHESIS;; Chlorophyll-a-Biosynthesis;; QUINONE-SYN;; TERPENOPHENOLICS-SYN;; PRENYLFLAVONOID-SYN;; Polyprenyl-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:7.5e-78 score:260.3 best_domain_score:260.0 name:polyprenyl_synt;
sprot_desc Prenyl transferase;
sprot_id sp|P72580|PREA_SYNY3;
sprot_target db:uniprot_sprot|sp|P72580|PREA_SYNY3 1 323 evalue:7.7e-124 qcov:100.00 identity:71.20;
tigrfam_acc TIGR02749;
tigrfam_desc solanesyl diphosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name prenyl_cyano;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR02749 evalue:4.5e-163 score:541.0 best_domain_score:540.8 name:TIGR02749;
13184 13381 CDS
ID metaerg.pl|06871
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc punctiforme;
genomedb_acc GCF_000020025.1;
genomedb_target db:genomedb|GCF_000020025.1|WP_012408513.1 1 65 evalue:1.0e-15 qcov:100.00 identity:70.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
tm_num 1;
13184 13381 transmembrane_helix
ID metaerg.pl|06872
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology o13199-13267i;
14438 13575 CDS
ID metaerg.pl|06873
allec_ids 5.1.1.3;
allgo_ids GO:0006807; GO:0036361; GO:0008881; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01776;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092346.1 1 287 evalue:3.7e-155 qcov:100.00 identity:94.80;
kegg_pathway_id 00471; 00251;
kegg_pathway_name D-Glutamine and D-glutamate metabolism; Glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6386; PWY-6470; PWY-6385; PWY-5265; PWY-6387;
metacyc_pathway_name peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;;
pfam_acc PF01177;
pfam_desc Asp/Glu/Hydantoin racemase;
pfam_id Asp_Glu_race;
pfam_target db:Pfam-A.hmm|PF01177.22 evalue:9.6e-35 score:119.7 best_domain_score:119.4 name:Asp_Glu_race;
sprot_desc Glutamate racemase;
sprot_id sp|Q3MD46|MURI_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MD46|MURI_ANAVT 1 286 evalue:5.4e-137 qcov:99.70 identity:82.90;
tigrfam_acc TIGR00067;
tigrfam_desc glutamate racemase;
tigrfam_mainrole Cell envelope;
tigrfam_name glut_race;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00067 evalue:2.1e-88 score:295.1 best_domain_score:294.9 name:TIGR00067;
17334 15388 CDS
ID metaerg.pl|06874
allgo_ids GO:0008745; GO:0009253;
allko_ids K08307; K01448;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092345.1 1 648 evalue:0.0e+00 qcov:100.00 identity:90.30;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF01520; PF11741;
pfam_desc N-acetylmuramoyl-L-alanine amidase; AMIN domain;
pfam_id Amidase_3; AMIN;
pfam_target db:Pfam-A.hmm|PF01520.18 evalue:4.8e-54 score:182.3 best_domain_score:181.4 name:Amidase_3; db:Pfam-A.hmm|PF11741.8 evalue:2.7e-31 score:106.8 best_domain_score:75.1 name:AMIN;
sp YES;
15388 15456 signal_peptide
ID metaerg.pl|06875
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
19526 18036 CDS
ID metaerg.pl|06876
allgo_ids GO:0006812; GO:0015299; GO:0016021; GO:0055085; GO:0042651; GO:0006814;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092344.1 1 496 evalue:3.9e-245 qcov:100.00 identity:96.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00999;
pfam_desc Sodium/hydrogen exchanger family;
pfam_id Na_H_Exchanger;
pfam_target db:Pfam-A.hmm|PF00999.21 evalue:3.6e-70 score:235.9 best_domain_score:235.2 name:Na_H_Exchanger;
sprot_desc High-affinity Na(+)/H(+) antiporter NhaS3;
sprot_id sp|Q55190|NHAS3_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55190|NHAS3_SYNY3 11 442 evalue:4.0e-148 qcov:87.10 identity:64.70;
tm_num 11;
19526 18036 transmembrane_helix
ID metaerg.pl|06877
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology o18093-18152i18189-18257o18372-18428i18447-18515o18528-18596i18657-18725o18753-18821i18882-18950o19113-19181i19200-19268o19296-19364i;
20035 19622 CDS
ID metaerg.pl|06878
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194852.1 1 137 evalue:2.4e-67 qcov:100.00 identity:92.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF01878;
pfam_desc EVE domain;
pfam_id EVE;
pfam_target db:Pfam-A.hmm|PF01878.18 evalue:2.8e-35 score:120.7 best_domain_score:120.5 name:EVE;
20228 20974 CDS
ID metaerg.pl|06879
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092341.1 1 248 evalue:2.4e-110 qcov:100.00 identity:89.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF04402;
pfam_desc Protein of unknown function (DUF541);
pfam_id SIMPL;
pfam_target db:Pfam-A.hmm|PF04402.14 evalue:2e-39 score:135.4 best_domain_score:135.2 name:SIMPL;
sp YES;
tm_num 1;
20228 20335 signal_peptide
ID metaerg.pl|06880
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
20228 20974 transmembrane_helix
ID metaerg.pl|06881
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology i20264-20332o;
21359 21006 CDS
ID metaerg.pl|06882
allgo_ids GO:0003697; GO:0006260;
allko_ids K03111;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092340.1 1 117 evalue:2.2e-58 qcov:100.00 identity:95.00;
kegg_pathway_id 03440; 03430; 03030;
kegg_pathway_name Homologous recombination; Mismatch repair; DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00436;
pfam_desc Single-strand binding protein family;
pfam_id SSB;
pfam_target db:Pfam-A.hmm|PF00436.25 evalue:6.7e-27 score:92.8 best_domain_score:92.6 name:SSB;
sprot_desc Single-stranded DNA-binding protein 1;
sprot_id sp|P0A4K0|SSB1_NOSS1;
sprot_target db:uniprot_sprot|sp|P0A4K0|SSB1_NOSS1 1 117 evalue:5.6e-48 qcov:100.00 identity:78.30;
tigrfam_acc TIGR00621;
tigrfam_desc single-stranded DNA-binding protein;
tigrfam_mainrole DNA metabolism;
tigrfam_name ssb;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00621 evalue:1.8e-32 score:112.1 best_domain_score:112.0 name:TIGR00621;
21728 22735 CDS
ID metaerg.pl|06883
allgo_ids GO:0000902; GO:0005737; GO:0005524; GO:0008360;
allko_ids K03569;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092339.1 1 335 evalue:3.1e-177 qcov:100.00 identity:98.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00022; PF14450; PF00012; PF06723;
pfam_desc Actin; Cell division protein FtsA; Hsp70 protein; MreB/Mbl protein;
pfam_id Actin; FtsA; HSP70; MreB_Mbl;
pfam_target db:Pfam-A.hmm|PF00022.19 evalue:1.2e-07 score:30.0 best_domain_score:23.8 name:Actin; db:Pfam-A.hmm|PF14450.6 evalue:2e-09 score:37.0 best_domain_score:35.7 name:FtsA; db:Pfam-A.hmm|PF00012.20 evalue:1.8e-12 score:45.5 best_domain_score:40.0 name:HSP70; db:Pfam-A.hmm|PF06723.13 evalue:1.2e-144 score:480.4 best_domain_score:480.2 name:MreB_Mbl;
sprot_desc Cell shape-determining protein MreB;
sprot_id sp|Q01465|MREB_BACSU;
sprot_target db:uniprot_sprot|sp|Q01465|MREB_BACSU 1 333 evalue:2.5e-101 qcov:99.40 identity:56.40;
tigrfam_acc TIGR00904;
tigrfam_desc cell shape determining protein, MreB/Mrl family;
tigrfam_mainrole Cell envelope;
tigrfam_name mreB;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00904 evalue:4.9e-145 score:481.9 best_domain_score:481.7 name:TIGR00904;
22830 23594 CDS
ID metaerg.pl|06884
allgo_ids GO:0008360;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092338.1 1 254 evalue:7.3e-131 qcov:100.00 identity:94.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF04085;
pfam_desc rod shape-determining protein MreC;
pfam_id MreC;
pfam_target db:Pfam-A.hmm|PF04085.14 evalue:5.8e-35 score:119.6 best_domain_score:119.3 name:MreC;
tigrfam_acc TIGR00219;
tigrfam_desc rod shape-determining protein MreC;
tigrfam_mainrole Cell envelope;
tigrfam_name mreC;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00219 evalue:4.4e-31 score:107.2 best_domain_score:106.9 name:TIGR00219;
tm_num 1;
22830 23594 transmembrane_helix
ID metaerg.pl|06885
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology i22863-22916o;
23650 24282 CDS
ID metaerg.pl|06886
allgo_ids GO:0008360; GO:0016021;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092337.1 1 210 evalue:1.3e-104 qcov:100.00 identity:91.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF04093;
pfam_desc rod shape-determining protein MreD;
pfam_id MreD;
pfam_target db:Pfam-A.hmm|PF04093.12 evalue:5.3e-10 score:38.8 best_domain_score:38.5 name:MreD;
tigrfam_acc TIGR03426;
tigrfam_desc rod shape-determining protein MreD;
tigrfam_mainrole Cell envelope;
tigrfam_name shape_MreD;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR03426 evalue:4.7e-36 score:123.2 best_domain_score:123.0 name:TIGR03426;
tm_num 4;
23650 24282 transmembrane_helix
ID metaerg.pl|06887
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology i23755-23823o23833-23886i24040-24108o24166-24234i;
24451 25725 CDS
ID metaerg.pl|06888
allec_ids 3.5.4.26; 1.1.1.193; 3.5.4.-;
allgo_ids GO:0002100; GO:0008251; GO:0008703; GO:0008835; GO:0050661; GO:0008270; GO:0009231;
allko_ids K11752;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194846.1 1 424 evalue:1.6e-226 qcov:100.00 identity:92.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id PWY-6168; PWY-5209; PWY-5354; RIBOSYN2-PWY; PWY-6167;
metacyc_pathway_name flavin biosynthesis III (fungi);; methyl-coenzyme M oxidation to CO2;; ; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis II (archaea);;
metacyc_pathway_type Flavin-Biosynthesis;; METHANOGENESIS;; ; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00383; PF14437; PF01872;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase; RibD C-terminal domain;
pfam_id dCMP_cyt_deam_1; MafB19-deam; RibD_C;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:2.7e-18 score:64.9 best_domain_score:64.1 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:6.3e-09 score:34.9 best_domain_score:33.6 name:MafB19-deam; db:Pfam-A.hmm|PF01872.17 evalue:1.8e-48 score:164.3 best_domain_score:163.4 name:RibD_C;
sprot_desc Riboflavin biosynthesis protein RibD;
sprot_id sp|Q55158|RIBD_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55158|RIBD_SYNY3 58 419 evalue:8.6e-123 qcov:85.40 identity:61.00;
tigrfam_acc TIGR00227; TIGR00326;
tigrfam_desc riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribD_Cterm; eubact_ribD;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00227 evalue:1.2e-61 score:207.2 best_domain_score:206.8 name:TIGR00227; db:TIGRFAMs.hmm|TIGR00326 evalue:1.2e-120 score:402.0 best_domain_score:401.7 name:TIGR00326;
26002 25787 CDS
ID metaerg.pl|06889
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092335.1 1 71 evalue:7.8e-30 qcov:100.00 identity:95.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
29861 26559 CDS
ID metaerg.pl|06890
allgo_ids GO:0003677; GO:0005524; GO:0016787;
allko_ids K01509;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092334.1 1 1100 evalue:0.0e+00 qcov:100.00 identity:96.60;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00271; PF04851; PF00176;
pfam_desc Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; SNF2 family N-terminal domain;
pfam_id Helicase_C; ResIII; SNF2_N;
pfam_target db:Pfam-A.hmm|PF00271.31 evalue:7.2e-13 score:48.1 best_domain_score:44.4 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:1.9e-09 score:37.0 best_domain_score:26.6 name:ResIII; db:Pfam-A.hmm|PF00176.23 evalue:1e-12 score:46.7 best_domain_score:26.8 name:SNF2_N;
30160 30495 CDS
ID metaerg.pl|06891
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194842.1 1 111 evalue:7.1e-46 qcov:100.00 identity:87.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
tm_num 1;
30160 30495 transmembrane_helix
ID metaerg.pl|06892
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology i30172-30231o;
30583 30951 CDS
ID metaerg.pl|06893
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194841.1 10 122 evalue:2.0e-49 qcov:92.60 identity:98.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF12732;
pfam_desc YtxH-like protein;
pfam_id YtxH;
pfam_target db:Pfam-A.hmm|PF12732.7 evalue:1.3e-14 score:53.7 best_domain_score:50.1 name:YtxH;
sp YES;
tm_num 1;
30583 30744 signal_peptide
ID metaerg.pl|06894
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
30583 30951 transmembrane_helix
ID metaerg.pl|06895
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology o30625-30693i;
30972 31448 CDS
ID metaerg.pl|06896
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194840.1 1 152 evalue:2.6e-65 qcov:96.20 identity:94.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
sp YES;
tm_num 1;
30972 31049 signal_peptide
ID metaerg.pl|06897
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
30972 31448 transmembrane_helix
ID metaerg.pl|06898
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology i30984-31052o;
31639 32445 CDS
ID metaerg.pl|06899
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092330.1 1 268 evalue:4.7e-152 qcov:100.00 identity:97.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF04536;
pfam_desc TPM domain;
pfam_id TPM_phosphatase;
pfam_target db:Pfam-A.hmm|PF04536.14 evalue:4.8e-09 score:35.7 best_domain_score:35.4 name:TPM_phosphatase;
sp YES;
tm_num 4;
31639 31734 signal_peptide
ID metaerg.pl|06900
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
31639 32445 transmembrane_helix
ID metaerg.pl|06901
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology i31675-31734o32176-32235i32254-32322o32350-32418i;
32524 33150 CDS
ID metaerg.pl|06902
allec_ids 5.4.99.60;
allgo_ids GO:0009236; GO:0016993; GO:0043778;
allko_ids K06042;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092329.1 1 208 evalue:3.0e-106 qcov:100.00 identity:97.60;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF02570;
pfam_desc Precorrin-8X methylmutase;
pfam_id CbiC;
pfam_target db:Pfam-A.hmm|PF02570.15 evalue:7.8e-66 score:220.7 best_domain_score:220.5 name:CbiC;
sprot_desc Cobalt-precorrin-8 methylmutase;
sprot_id sp|P74304|CBIC_SYNY3;
sprot_target db:uniprot_sprot|sp|P74304|CBIC_SYNY3 9 199 evalue:7.1e-30 qcov:91.80 identity:37.60;
33890 33201 CDS
ID metaerg.pl|06903
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092328.1 1 227 evalue:4.9e-118 qcov:99.10 identity:95.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
tm_num 2;
33890 33201 transmembrane_helix
ID metaerg.pl|06904
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology i33294-33362o33372-33440i;
34747 33911 CDS
ID metaerg.pl|06905
allec_ids 1.17.1.8;
allgo_ids GO:0008839; GO:0009089; GO:0055114; GO:0005737; GO:0051287; GO:0050661; GO:0016726; GO:0019877;
allko_ids K00215;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092327.1 1 278 evalue:5.9e-150 qcov:100.00 identity:97.80;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF05173; PF01113;
pfam_desc Dihydrodipicolinate reductase, C-terminus; Dihydrodipicolinate reductase, N-terminus;
pfam_id DapB_C; DapB_N;
pfam_target db:Pfam-A.hmm|PF05173.14 evalue:6.4e-32 score:109.4 best_domain_score:108.8 name:DapB_C; db:Pfam-A.hmm|PF01113.20 evalue:3e-38 score:130.0 best_domain_score:129.2 name:DapB_N;
sprot_desc 4-hydroxy-tetrahydrodipicolinate reductase;
sprot_id sp|Q8YU19|DAPB_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YU19|DAPB_NOSS1 1 278 evalue:1.2e-144 qcov:100.00 identity:92.10;
tigrfam_acc TIGR00036;
tigrfam_desc 4-hydroxy-tetrahydrodipicolinate reductase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapB;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00036 evalue:3.8e-88 score:294.7 best_domain_score:294.5 name:TIGR00036;
35335 34796 CDS
ID metaerg.pl|06906
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092326.1 1 179 evalue:3.7e-89 qcov:100.00 identity:92.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF05685;
pfam_desc Putative restriction endonuclease;
pfam_id Uma2;
pfam_target db:Pfam-A.hmm|PF05685.12 evalue:2.8e-42 score:143.4 best_domain_score:143.2 name:Uma2;
35437 36249 CDS
ID metaerg.pl|06907
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092325.1 13 270 evalue:1.2e-134 qcov:95.60 identity:91.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
sp YES;
35437 35514 lipoprotein_signal_peptide
ID metaerg.pl|06908
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
36246 37058 CDS
ID metaerg.pl|06909
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092324.1 1 270 evalue:4.9e-157 qcov:100.00 identity:98.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:8.8e-10 score:38.6 best_domain_score:30.9 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:3.4e-31 score:107.9 best_domain_score:107.5 name:Metallophos_2;
sprot_desc hypothetical protein;
sprot_id sp|Q58322|Y912_METJA;
sprot_target db:uniprot_sprot|sp|Q58322|Y912_METJA 3 254 evalue:3.2e-30 qcov:93.30 identity:35.80;
37145 37903 CDS
ID metaerg.pl|06910
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092323.1 1 252 evalue:8.9e-137 qcov:100.00 identity:94.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
38388 37969 CDS
ID metaerg.pl|06911
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092322.1 1 137 evalue:1.8e-62 qcov:98.60 identity:86.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
sp YES;
37969 38013 lipoprotein_signal_peptide
ID metaerg.pl|06912
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
38527 38811 CDS
ID metaerg.pl|06913
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194831.1 1 94 evalue:4.2e-47 qcov:100.00 identity:93.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF04248;
pfam_desc Domain of unknown function (DUF427);
pfam_id NTP_transf_9;
pfam_target db:Pfam-A.hmm|PF04248.12 evalue:8.9e-32 score:108.1 best_domain_score:107.9 name:NTP_transf_9;
39361 40503 CDS
ID metaerg.pl|06914
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira carneum;
genomedb_acc GCF_002368155.1;
genomedb_target db:genomedb|GCF_002368155.1|WP_096728848.1 1 380 evalue:7.5e-172 qcov:100.00 identity:82.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF03235;
pfam_desc Protein of unknown function DUF262;
pfam_id DUF262;
pfam_target db:Pfam-A.hmm|PF03235.14 evalue:4.6e-23 score:81.8 best_domain_score:73.8 name:DUF262;
40500 41627 CDS
ID metaerg.pl|06915
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira carneum;
genomedb_acc GCF_002368155.1;
genomedb_target db:genomedb|GCF_002368155.1|WP_096728847.1 1 375 evalue:1.4e-194 qcov:100.00 identity:89.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF13175; PF13304; PF11398; PF12476;
pfam_desc AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system; Protein of unknown function (DUF2813); Protein of unknown function (DUF3696);
pfam_id AAA_15; AAA_21; DUF2813; DUF3696;
pfam_target db:Pfam-A.hmm|PF13175.6 evalue:5.1e-27 score:94.8 best_domain_score:55.6 name:AAA_15; db:Pfam-A.hmm|PF13304.6 evalue:1e-17 score:64.1 best_domain_score:45.4 name:AAA_21; db:Pfam-A.hmm|PF11398.8 evalue:8.1e-05 score:21.3 best_domain_score:9.9 name:DUF2813; db:Pfam-A.hmm|PF12476.8 evalue:1e-19 score:69.9 best_domain_score:69.0 name:DUF3696;
41631 42623 CDS
ID metaerg.pl|06916
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira carneum;
genomedb_acc GCF_002368155.1;
genomedb_target db:genomedb|GCF_002368155.1|WP_096728846.1 1 330 evalue:6.6e-140 qcov:100.00 identity:74.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
45587 42684 CDS
ID metaerg.pl|06917
allec_ids 2.7.13.3;
allgo_ids GO:0006935; GO:0007165; GO:0005737; GO:0005524; GO:0000155; GO:0019904;
allko_ids K07679; K02478; K07648; K07651; K07718; K07778; K11354; K07768; K07711; K00873; K07641; K07646; K08475; K07639; K01120; K07673; K07652; K07654; K07682; K03407; K07637; K11231; K02491; K13490; K07645; K07708; K07677; K07704; K10909; K01937; K08282; K00760; K02484; K11640; K11711; K07642; K11527; K13587; K10715; K07678; K02482; K02480; K07653; K07636; K07697; K02489; K07716; K07710; K01768; K02668; K03388; K08479; K10916; K07647; K07675; K07717; K12767; K02486; K13761; K11383; K07769; K04757; K10125; K11357; K07709; K07644; K06379; K07676; K10681;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092319.1 1 967 evalue:0.0e+00 qcov:100.00 identity:93.20;
kegg_pathway_id 00790; 00620; 03090; 02020; 04011; 00240; 05111; 00230; 00983; 00710; 00010;
kegg_pathway_name Folate biosynthesis; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Drug metabolism - other enzymes; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF01584; PF02895; PF02518; PF01627; PF00072;
pfam_desc CheW-like domain; Signal transducing histidine kinase, homodimeric domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain; Response regulator receiver domain;
pfam_id CheW; H-kinase_dim; HATPase_c; Hpt; Response_reg;
pfam_target db:Pfam-A.hmm|PF01584.19 evalue:2.4e-21 score:75.0 best_domain_score:74.0 name:CheW; db:Pfam-A.hmm|PF02895.14 evalue:2.3e-07 score:30.3 best_domain_score:30.3 name:H-kinase_dim; db:Pfam-A.hmm|PF02518.26 evalue:2.9e-17 score:62.4 best_domain_score:60.6 name:HATPase_c; db:Pfam-A.hmm|PF01627.23 evalue:3.7e-19 score:68.0 best_domain_score:61.1 name:Hpt; db:Pfam-A.hmm|PF00072.24 evalue:5.7e-23 score:80.5 best_domain_score:78.5 name:Response_reg;
sprot_desc Chemotaxis protein CheA;
sprot_id sp|Q56310|CHEA_THEMA;
sprot_target db:uniprot_sprot|sp|Q56310|CHEA_THEMA 13 798 evalue:9.6e-61 qcov:81.30 identity:25.50;
47990 45741 CDS
ID metaerg.pl|06918
allgo_ids GO:0007165; GO:0016021;
allko_ids K07642; K02484; K07704; K07654; K07652; K02478; K07651; K07718; K07644; K07640; K07636; K07678;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092318.1 1 749 evalue:0.0e+00 qcov:100.00 identity:84.20;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF02743; PF00672; PF00015;
pfam_desc Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signalling domain;
pfam_id dCache_1; HAMP; MCPsignal;
pfam_target db:Pfam-A.hmm|PF02743.18 evalue:6.4e-16 score:58.1 best_domain_score:58.1 name:dCache_1; db:Pfam-A.hmm|PF00672.25 evalue:1.2e-10 score:40.8 best_domain_score:26.5 name:HAMP; db:Pfam-A.hmm|PF00015.21 evalue:3e-41 score:140.3 best_domain_score:140.3 name:MCPsignal;
tm_num 2;
47990 45741 transmembrane_helix
ID metaerg.pl|06919
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology o45924-45992i46728-46796o;
48546 48049 CDS
ID metaerg.pl|06920
allgo_ids GO:0006935; GO:0007165;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092317.1 1 161 evalue:6.3e-75 qcov:97.60 identity:91.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF01584;
pfam_desc CheW-like domain;
pfam_id CheW;
pfam_target db:Pfam-A.hmm|PF01584.19 evalue:3.3e-25 score:87.6 best_domain_score:87.3 name:CheW;
48928 48551 CDS
ID metaerg.pl|06921
allgo_ids GO:0000160;
allko_ids K07679; K02478; K07648; K07651; K07718; K07778; K11354; K07768; K07711; K07641; K07646; K08475; K07639; K01120; K07673; K07652; K07654; K07682; K03407; K07637; K11231; K02491; K13490; K07645; K07708; K07677; K07704; K10909; K01937; K08282; K02484; K00760; K11356; K11640; K11711; K07642; K02030; K11527; K10715; K07678; K02482; K02480; K07653; K07636; K02489; K07716; K07710; K01768; K02668; K03388; K08479; K10916; K07647; K07675; K07717; K12767; K13761; K02486; K11383; K04757; K10125; K11357; K07709; K07644; K01769; K07650; K06379; K10681; K07676; K02658;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092316.1 1 125 evalue:1.3e-59 qcov:100.00 identity:94.40;
kegg_pathway_id 00983; 00240; 05111; 00230; 03090; 04011; 02020; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:2.2e-29 score:101.1 best_domain_score:100.9 name:Response_reg;
sprot_desc hypothetical protein;
sprot_id sp|P43501|PILH_PSEAE;
sprot_target db:uniprot_sprot|sp|P43501|PILH_PSEAE 6 124 evalue:1.9e-22 qcov:95.20 identity:39.50;
50022 48997 CDS
ID metaerg.pl|06922
allgo_ids GO:0000160; GO:0030428; GO:0006995; GO:0043158;
allko_ids K11640; K11356; K02484; K07642; K11711; K11231; K08282; K01937; K07708; K07677; K01120; K07673; K08475; K07639; K07646; K07641; K07637; K03407; K07682; K07654; K07651; K07648; K07679; K07768; K11354; K07778; K07644; K10681; K07676; K06379; K07717; K07675; K07647; K11357; K10125; K04757; K02486; K12767; K07710; K07716; K02489; K10916; K08479; K03388; K02668; K07678; K10715; K11527; K07636; K07653; K02480; K02482;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092315.1 1 341 evalue:1.7e-167 qcov:100.00 identity:87.70;
kegg_pathway_id 03090; 04011; 02020; 00240; 00230; 05111; 00790;
kegg_pathway_name Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General; Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF14332; PF00072;
pfam_desc Domain of unknown function (DUF4388); Response regulator receiver domain;
pfam_id DUF4388; Response_reg;
pfam_target db:Pfam-A.hmm|PF14332.6 evalue:5.9e-07 score:28.9 best_domain_score:28.2 name:DUF4388; db:Pfam-A.hmm|PF00072.24 evalue:2.9e-23 score:81.4 best_domain_score:80.4 name:Response_reg;
sprot_desc hypothetical protein;
sprot_id sp|P39048|PATA_NOSS1;
sprot_target db:uniprot_sprot|sp|P39048|PATA_NOSS1 1 340 evalue:9.4e-88 qcov:99.70 identity:46.80;
50894 50812 tRNA
ID metaerg.pl|06923
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
name tRNA_Leu_tag;
52161 50974 CDS
ID metaerg.pl|06924
allec_ids 5.1.1.1;
allgo_ids GO:0008784; GO:0030170; GO:0030632;
allko_ids K01775;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092310.1 1 395 evalue:1.3e-211 qcov:100.00 identity:93.90;
kegg_pathway_id 00252; 00473;
kegg_pathway_name Alanine and aspartate metabolism; D-Alanine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id ALADEG-PWY; ALANINE-VALINESYN-PWY; PWY0-1061;
metacyc_pathway_name L-alanine degradation I;; L-alanine biosynthesis I;; superpathway of L-alanine biosynthesis;;
metacyc_pathway_type ALANINE-DEG;; ALANINE-SYN;; ALANINE-SYN; Super-Pathways;;
pfam_acc PF00842; PF01168;
pfam_desc Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain;
pfam_id Ala_racemase_C; Ala_racemase_N;
pfam_target db:Pfam-A.hmm|PF00842.21 evalue:2.8e-46 score:155.6 best_domain_score:154.7 name:Ala_racemase_C; db:Pfam-A.hmm|PF01168.20 evalue:2.4e-72 score:242.4 best_domain_score:242.4 name:Ala_racemase_N;
sprot_desc Alanine racemase;
sprot_id sp|Q8YU96|ALR_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YU96|ALR_NOSS1 11 395 evalue:3.2e-180 qcov:97.50 identity:80.30;
tigrfam_acc TIGR00492;
tigrfam_desc alanine racemase;
tigrfam_mainrole Cell envelope;
tigrfam_name alr;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00492 evalue:5.3e-127 score:422.9 best_domain_score:422.6 name:TIGR00492;
52586 53083 CDS
ID metaerg.pl|06925
allgo_ids GO:0003676; GO:0004519;
casgene_acc cas9_archaeal;
casgene_name Cas9_archaeal;
casgene_target db:casgenes.hmm|cas9_archaeal evalue:6.5e-08 score:30.7 best_domain_score:30.6 name:Cas9_archaeal;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092309.1 1 165 evalue:2.7e-94 qcov:100.00 identity:99.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF01844; PF13395; PF14279;
pfam_desc HNH endonuclease; HNH endonuclease; HNH endonuclease;
pfam_id HNH; HNH_4; HNH_5;
pfam_target db:Pfam-A.hmm|PF01844.23 evalue:6.3e-15 score:54.3 best_domain_score:53.5 name:HNH; db:Pfam-A.hmm|PF13395.6 evalue:1.8e-09 score:36.6 best_domain_score:35.6 name:HNH_4; db:Pfam-A.hmm|PF14279.6 evalue:5.7e-14 score:50.9 best_domain_score:50.5 name:HNH_5;
53638 54924 CDS
ID metaerg.pl|06926
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092308.1 1 428 evalue:3.6e-231 qcov:100.00 identity:96.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF01368;
pfam_desc DHH family;
pfam_id DHH;
pfam_target db:Pfam-A.hmm|PF01368.20 evalue:7.5e-07 score:28.6 best_domain_score:27.8 name:DHH;
55165 55614 CDS
ID metaerg.pl|06927
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092307.1 1 149 evalue:1.9e-70 qcov:100.00 identity:89.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF01724;
pfam_desc Domain of unknown function DUF29;
pfam_id DUF29;
pfam_target db:Pfam-A.hmm|PF01724.16 evalue:4.2e-48 score:162.3 best_domain_score:162.1 name:DUF29;
55690 56187 CDS
ID metaerg.pl|06928
allec_ids 3.1.3.-;
allgo_ids GO:0005737; GO:0101006;
allko_ids K01834; K02226; K01837; K15634; K08296;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092306.1 1 164 evalue:1.3e-80 qcov:99.40 identity:93.30;
kegg_pathway_id 00860; 00010;
kegg_pathway_name Porphyrin and chlorophyll metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id PWY-882; PWY-5083; NADPHOS-DEPHOS-PWY; PWY-6456; PWY-5491;
metacyc_pathway_name L-ascorbate biosynthesis I (L-galactose pathway);; NAD/NADH phosphorylation and dephosphorylation;; NAD phosphorylation and dephosphorylation;; serinol biosynthesis;; diethylphosphate degradation;;
metacyc_pathway_type Ascorbate-Biosynthesis;; NAD-Metabolism;; NAD-Metabolism;; Polyamine-Biosynthesis;; Phosphorus-Compounds;;
pfam_acc PF00300;
pfam_desc Histidine phosphatase superfamily (branch 1);
pfam_id His_Phos_1;
pfam_target db:Pfam-A.hmm|PF00300.22 evalue:8.6e-13 score:47.6 best_domain_score:46.9 name:His_Phos_1;
sprot_desc hypothetical protein;
sprot_id sp|Q55129|Y400_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55129|Y400_SYNY3 1 164 evalue:4.8e-37 qcov:99.40 identity:48.80;
tigrfam_acc TIGR00249;
tigrfam_desc phosphohistidine phosphatase SixA;
tigrfam_mainrole Regulatory functions;
tigrfam_name sixA;
tigrfam_sub1role Protein interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00249 evalue:1.5e-34 score:118.2 best_domain_score:118.1 name:TIGR00249;
56300 57436 CDS
ID metaerg.pl|06929
allec_ids 2.3.3.16;
allgo_ids GO:0046912; GO:0005737; GO:0004108; GO:0005975; GO:0006099;
allko_ids K01647;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092305.1 1 378 evalue:3.8e-216 qcov:100.00 identity:98.40;
kegg_pathway_id 00020; 00630;
kegg_pathway_name Citrate cycle (TCA cycle); Glyoxylate and dicarboxylate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00285;
pfam_desc Citrate synthase, C-terminal domain;
pfam_id Citrate_synt;
pfam_target db:Pfam-A.hmm|PF00285.21 evalue:1.2e-135 score:451.5 best_domain_score:451.3 name:Citrate_synt;
sprot_desc Citrate synthase;
sprot_id sp|Q59977|CISY_SYNY3;
sprot_target db:uniprot_sprot|sp|Q59977|CISY_SYNY3 6 378 evalue:5.8e-171 qcov:98.70 identity:75.90;
tigrfam_acc TIGR01800;
tigrfam_desc 2-methylcitrate synthase/citrate synthase II;
tigrfam_name cit_synth_II;
tigrfam_target db:TIGRFAMs.hmm|TIGR01800 evalue:3e-135 score:449.8 best_domain_score:449.7 name:TIGR01800;
57752 58939 CDS
ID metaerg.pl|06930
allec_ids 7.1.1.-;
allgo_ids GO:0016020; GO:0055114; GO:0016021; GO:0042651; GO:0016655; GO:0048038; GO:0019684;
allko_ids K05572;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092304.1 24 395 evalue:7.2e-202 qcov:94.20 identity:100.00;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00146;
pfam_desc NADH dehydrogenase;
pfam_id NADHdh;
pfam_target db:Pfam-A.hmm|PF00146.21 evalue:1e-116 score:388.6 best_domain_score:388.4 name:NADHdh;
sprot_desc NAD(P)H-quinone oxidoreductase subunit 1;
sprot_id sp|Q3M9K9|NU1C_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M9K9|NU1C_ANAVT 24 395 evalue:4.2e-188 qcov:94.20 identity:90.10;
tm_num 6;
57752 58939 transmembrane_helix
ID metaerg.pl|06931
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology o57905-57973i58106-58174o58202-58270i58583-58651o58730-58798i58859-58927o;
59026 59619 CDS
ID metaerg.pl|06932
allec_ids 7.1.1.-; 1.6.5.3;
allgo_ids GO:0042651; GO:0051539; GO:0005506; GO:0008137; GO:0048038; GO:0019684;
allko_ids K00240; K00395; K00123; K00443; K00532; K00266; K04014; K11260; K00122; K00380; K03941; K00873; K00337; K00204; K00125; K00192; K00335; K00226; K00205; K00336; K00441; K00171; K08349; K00390; K05588; K00170; K00176; K00207; K03388; K11181; K05580; K00172; K00124; K00436; K00533; K00338; K00265;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006199067.1 1 197 evalue:2.0e-112 qcov:100.00 identity:98.00;
kegg_pathway_id 00130; 00410; 00190; 00680; 00633; 00251; 02020; 00910; 00770; 00020; 00230; 00710; 00010; 00920; 05012; 00630; 00790; 00640; 00650; 00620; 00450; 00632; 00240; 00983; 00720;
kegg_pathway_name Ubiquinone biosynthesis; beta-Alanine metabolism; Oxidative phosphorylation; Methane metabolism; Trinitrotoluene degradation; Glutamate metabolism; Two-component system - General; Nitrogen metabolism; Pantothenate and CoA biosynthesis; Citrate cycle (TCA cycle); Purine metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Sulfur metabolism; Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Folate biosynthesis; Propanoate metabolism; Butanoate metabolism; Pyruvate metabolism; Selenoamino acid metabolism; Benzoate degradation via CoA ligation; Pyrimidine metabolism; Drug metabolism - other enzymes; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id PWY-4302; PWY0-1334; PWY0-1335; PWY-5083; PWY-3781;
metacyc_pathway_name aerobic respiration III (alternative oxidase pathway);; NADH to cytochrome bd oxidase electron transfer I;; NADH to cytochrome bo oxidase electron transfer I;; NAD/NADH phosphorylation and dephosphorylation;; aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; AEROBIC-RESPIRATION; Electron-Transfer;; AEROBIC-RESPIRATION; Electron-Transfer;; NAD-Metabolism;; AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00037; PF13237; PF13484; PF13534; PF13746; PF12797; PF12838; PF13187;
pfam_desc 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S double cluster binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id Fer4; Fer4_10; Fer4_16; Fer4_17; Fer4_18; Fer4_2; Fer4_7; Fer4_9;
pfam_target db:Pfam-A.hmm|PF00037.27 evalue:1.9e-13 score:48.9 best_domain_score:29.9 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:1.7e-11 score:43.3 best_domain_score:36.6 name:Fer4_10; db:Pfam-A.hmm|PF13484.6 evalue:7.2e-09 score:35.7 best_domain_score:21.7 name:Fer4_16; db:Pfam-A.hmm|PF13534.6 evalue:4e-07 score:29.7 best_domain_score:16.6 name:Fer4_17; db:Pfam-A.hmm|PF13746.6 evalue:1.3e-06 score:27.9 best_domain_score:18.2 name:Fer4_18; db:Pfam-A.hmm|PF12797.7 evalue:1.9e-08 score:33.2 best_domain_score:24.0 name:Fer4_2; db:Pfam-A.hmm|PF12838.7 evalue:7.3e-12 score:44.9 best_domain_score:36.9 name:Fer4_7; db:Pfam-A.hmm|PF13187.6 evalue:2.9e-08 score:33.0 best_domain_score:32.3 name:Fer4_9;
sprot_desc NAD(P)H-quinone oxidoreductase subunit I;
sprot_id sp|Q3M9K8|NDHI_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M9K8|NDHI_ANAVT 1 193 evalue:7.9e-79 qcov:98.00 identity:89.10;
tigrfam_acc TIGR00403; TIGR01971;
tigrfam_desc NADH-plastoquinone oxidoreductase, I subunit; NADH-quinone oxidoreductase, chain I;
tigrfam_mainrole Energy metabolism; Energy metabolism;
tigrfam_name ndhI; NuoI;
tigrfam_sub1role Electron transport; Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR00403 evalue:3.2e-105 score:348.7 best_domain_score:348.4 name:TIGR00403; db:TIGRFAMs.hmm|TIGR01971 evalue:6.1e-42 score:141.2 best_domain_score:140.9 name:TIGR01971;
59783 60397 CDS
ID metaerg.pl|06933
allec_ids 7.1.1.-;
allgo_ids GO:0008137; GO:0055114; GO:0016021; GO:0048038;
allko_ids K05578;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094003.1 1 204 evalue:3.6e-96 qcov:100.00 identity:95.60;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00499;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 6;
pfam_id Oxidored_q3;
pfam_target db:Pfam-A.hmm|PF00499.20 evalue:3.7e-35 score:120.0 best_domain_score:119.4 name:Oxidored_q3;
sprot_desc NAD(P)H-quinone oxidoreductase chain 6;
sprot_id sp|Q8Z075|NU6C_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8Z075|NU6C_NOSS1 1 204 evalue:3.1e-78 qcov:100.00 identity:80.40;
tm_num 5;
59783 60397 transmembrane_helix
ID metaerg.pl|06934
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology o59801-59869i59873-59941o59954-60022i60083-60151o60215-60283i;
60480 60785 CDS
ID metaerg.pl|06935
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0042651; GO:0016655; GO:0048038; GO:0042773; GO:0019684;
allko_ids K05576;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc linckia_B;
genomedb_acc GCF_002368035.1;
genomedb_target db:genomedb|GCF_002368035.1|WP_006199065.1 1 101 evalue:3.0e-43 qcov:100.00 identity:100.00;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00420;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
pfam_id Oxidored_q2;
pfam_target db:Pfam-A.hmm|PF00420.24 evalue:1.7e-27 score:94.4 best_domain_score:94.2 name:Oxidored_q2;
sprot_desc NAD(P)H-quinone oxidoreductase subunit 4L;
sprot_id sp|Q9WWM4|NU4LC_NOSS1;
sprot_target db:uniprot_sprot|sp|Q9WWM4|NU4LC_NOSS1 1 101 evalue:1.4e-44 qcov:100.00 identity:98.00;
tm_num 3;
60480 60785 transmembrane_helix
ID metaerg.pl|06936
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology o60489-60548i60567-60635o60663-60731i;
60792 61712 CDS
ID metaerg.pl|06937
allec_ids 2.7.1.23;
allgo_ids GO:0003951; GO:0006741; GO:0005737; GO:0005524; GO:0046872; GO:0019674;
allko_ids K00858;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092303.1 1 306 evalue:1.9e-173 qcov:100.00 identity:98.70;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id PWY-5083; NADPHOS-DEPHOS-PWY;
metacyc_pathway_name NAD/NADH phosphorylation and dephosphorylation;; NAD phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; NAD-Metabolism;;
pfam_acc PF01513;
pfam_desc ATP-NAD kinase;
pfam_id NAD_kinase;
pfam_target db:Pfam-A.hmm|PF01513.21 evalue:9.4e-64 score:214.6 best_domain_score:214.3 name:NAD_kinase;
sprot_desc NAD kinase 2;
sprot_id sp|Q3M9K5|NADK2_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M9K5|NADK2_ANAVT 1 306 evalue:1.2e-166 qcov:100.00 identity:91.80;
61881 63476 CDS
ID metaerg.pl|06938
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092392.1 1 526 evalue:8.2e-233 qcov:99.10 identity:81.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF13231;
pfam_desc Dolichyl-phosphate-mannose-protein mannosyltransferase;
pfam_id PMT_2;
pfam_target db:Pfam-A.hmm|PF13231.6 evalue:1.6e-12 score:47.1 best_domain_score:47.1 name:PMT_2;
tm_num 10;
61881 63476 transmembrane_helix
ID metaerg.pl|06939
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology o61908-61964i62220-62288o62316-62372i62391-62450o62493-62561i62622-62690o62808-62876i62895-62963o62976-63044i63081-63140o;
63615 64331 CDS
ID metaerg.pl|06940
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp001712795;
genomedb_acc GCF_001712795.1;
genomedb_target db:genomedb|GCF_001712795.1|WP_069073032.1 1 236 evalue:2.3e-110 qcov:99.20 identity:80.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF13301;
pfam_desc Protein of unknown function (DUF4079);
pfam_id DUF4079;
pfam_target db:Pfam-A.hmm|PF13301.6 evalue:2.5e-50 score:169.5 best_domain_score:168.2 name:DUF4079;
tm_num 6;
63615 64331 transmembrane_helix
ID metaerg.pl|06941
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology o63642-63710i63798-63851o63888-63956i63975-64043o64059-64127i64164-64223o;
65658 64378 CDS
ID metaerg.pl|06942
allgo_ids GO:0000155; GO:0007165;
allko_ids K11231; K07643; K02491; K13490; K07645; K07677; K07708; K10909; K07704; K01937; K08282; K02484; K00760; K11356; K11640; K11711; K07642; K07679; K02478; K07648; K07651; K11623; K07718; K07698; K07778; K11354; K11633; K07768; K00873; K07711; K13533; K11328; K07641; K13598; K07646; K07639; K08475; K01120; K07673; K07652; K07654; K07649; K07682; K00936; K07777; K03407; K07637; K07647; K10942; K13040; K07675; K07717; K12767; K13761; K02486; K11383; K07769; K11520; K14509; K11617; K04757; K10125; K11629; K11357; K07709; K13532; K07644; K01769; K07650; K06379; K10681; K07676; K02030; K11527; K13587; K10715; K07678; K02482; K14489; K02480; K07638; K07653; K07636; K07697; K02489; K07716; K07640; K07710; K07656; K01768; K02668; K03388; K08479; K07674; K10916;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092393.1 1 426 evalue:7.3e-208 qcov:100.00 identity:89.20;
kegg_pathway_id 04011; 02020; 03090; 00620; 00790; 00010; 00710; 00983; 05111; 00230; 00240;
kegg_pathway_name MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism; Folate biosynthesis; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Drug metabolism - other enzymes; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF02518; PF13589; PF00512; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Response regulator receiver domain;
pfam_id HATPase_c; HATPase_c_3; HisKA; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:2.1e-19 score:69.3 best_domain_score:68.6 name:HATPase_c; db:Pfam-A.hmm|PF13589.6 evalue:2.5e-06 score:26.6 best_domain_score:25.6 name:HATPase_c_3; db:Pfam-A.hmm|PF00512.25 evalue:8.3e-12 score:44.2 best_domain_score:42.0 name:HisKA; db:Pfam-A.hmm|PF00072.24 evalue:2.8e-27 score:94.4 best_domain_score:93.0 name:Response_reg;
68810 65667 CDS
ID metaerg.pl|06943
allgo_ids GO:0005515;
allko_ids K10942; K13040; K07647; K07675; K07717; K11520; K07769; K14509; K12767; K11383; K02486; K11629; K10125; K11357; K04757; K07709; K13532; K07644; K01769; K06379; K07676; K10681; K07650; K02030; K11527; K13587; K10715; K07678; K02480; K02482; K08801; K14489; K07636; K07638; K07653; K07716; K02489; K07697; K07656; K01768; K07640; K07710; K03388; K02668; K10916; K08479; K07674; K07643; K11231; K02491; K07677; K07708; K07645; K01937; K08282; K07704; K10909; K00760; K02484; K11640; K11356; K11711; K07642; K07648; K07679; K02478; K07718; K07698; K07651; K07768; K11633; K07778; K11354; K13533; K11328; K00873; K07711; K08884; K07639; K08475; K07673; K01120; K13598; K07641; K07646; K07652; K07682; K07649; K00936; K07777; K07654; K07637; K03407;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092394.1 1 1046 evalue:0.0e+00 qcov:99.90 identity:83.70;
kegg_pathway_id 00240; 05111; 00230; 00983; 00710; 00010; 00790; 03090; 00620; 04011; 02020;
kegg_pathway_name Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Drug metabolism - other enzymes; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Folate biosynthesis; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF01590; PF13185; PF13492; PF02518; PF00512; PF00072;
pfam_desc GAF domain; GAF domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Response regulator receiver domain;
pfam_id GAF; GAF_2; GAF_3; HATPase_c; HisKA; Response_reg;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:2e-25 score:89.2 best_domain_score:58.3 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:8.4e-07 score:28.6 best_domain_score:14.9 name:GAF_2; db:Pfam-A.hmm|PF13492.6 evalue:7.9e-07 score:28.7 best_domain_score:13.5 name:GAF_3; db:Pfam-A.hmm|PF02518.26 evalue:4.1e-28 score:97.4 best_domain_score:96.2 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:2.3e-21 score:74.8 best_domain_score:74.8 name:HisKA; db:Pfam-A.hmm|PF00072.24 evalue:1.5e-24 score:85.5 best_domain_score:84.0 name:Response_reg;
tm_num 2;
68810 65667 transmembrane_helix
ID metaerg.pl|06944
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology o65766-65834i65868-65936o;
69698 70375 CDS
ID metaerg.pl|06945
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092395.1 1 225 evalue:2.3e-80 qcov:100.00 identity:67.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
70584 71624 CDS
ID metaerg.pl|06946
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092396.1 1 342 evalue:3.4e-171 qcov:98.80 identity:87.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF07082;
pfam_desc Protein of unknown function (DUF1350);
pfam_id DUF1350;
pfam_target db:Pfam-A.hmm|PF07082.11 evalue:8.1e-24 score:83.5 best_domain_score:54.7 name:DUF1350;
tm_num 1;
70584 71624 transmembrane_helix
ID metaerg.pl|06947
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology o70641-70709i;
72072 75422 CDS
ID metaerg.pl|06948
allec_ids 5.4.99.16;
allgo_ids GO:0003824; GO:0005975;
allko_ids K01176; K01178; K01226; K01182; K01236; K01215; K00705; K00700; K01187; K00689; K05343; K01200;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092397.1 1 1116 evalue:0.0e+00 qcov:100.00 identity:93.30;
kegg_pathway_id 02020; 00500; 00052;
kegg_pathway_name Two-component system - General; Starch and sucrose metabolism; Galactose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id PWY-2622;
metacyc_pathway_name trehalose biosynthesis IV;;
metacyc_pathway_type Trehalose-biosynthesis;;
pfam_acc PF00128; PF18085; PF16657;
pfam_desc Alpha amylase, catalytic domain; Maltokinase N-terminal cap domain ; Maltogenic Amylase, C-terminal domain;
pfam_id Alpha-amylase; Mak_N_cap; Malt_amylase_C;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:1.3e-80 score:270.7 best_domain_score:268.1 name:Alpha-amylase; db:Pfam-A.hmm|PF18085.1 evalue:4.1e-08 score:33.4 best_domain_score:32.6 name:Mak_N_cap; db:Pfam-A.hmm|PF16657.5 evalue:3.8e-26 score:90.2 best_domain_score:89.0 name:Malt_amylase_C;
tigrfam_acc TIGR02456; TIGR02457;
tigrfam_desc trehalose synthase; putative maltokinase;
tigrfam_mainrole Energy metabolism; Energy metabolism;
tigrfam_name treS_nterm; TreS_Cterm;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides; Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02456 evalue:1.2e-269 score:894.5 best_domain_score:894.1 name:TIGR02456; db:TIGRFAMs.hmm|TIGR02457 evalue:1.8e-112 score:375.9 best_domain_score:375.5 name:TIGR02457;
76353 75499 CDS
ID metaerg.pl|06949
allec_ids 3.1.1.1; 2.1.1.197;
allgo_ids GO:0016787; GO:0010340; GO:0052689; GO:0004141; GO:0102130; GO:0080030; GO:0009102;
allko_ids K01259; K02169;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092398.1 1 278 evalue:1.4e-154 qcov:97.90 identity:95.30;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id PWY-6303;
metacyc_pathway_name methyl indole-3-acetate interconversion;;
metacyc_pathway_type Auxin-Biosynthesis; Interconversion;;
pfam_acc PF00561; PF12697; PF01738; PF12146; PF06821; PF00975;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Dienelactone hydrolase family; Serine aminopeptidase, S33; Serine hydrolase; Thioesterase domain;
pfam_id Abhydrolase_1; Abhydrolase_6; DLH; Hydrolase_4; Ser_hydrolase; Thioesterase;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:2.5e-25 score:88.8 best_domain_score:82.8 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:1.5e-18 score:67.5 best_domain_score:67.2 name:Abhydrolase_6; db:Pfam-A.hmm|PF01738.18 evalue:9.1e-06 score:24.6 best_domain_score:18.7 name:DLH; db:Pfam-A.hmm|PF12146.8 evalue:6.2e-22 score:77.2 best_domain_score:76.9 name:Hydrolase_4; db:Pfam-A.hmm|PF06821.13 evalue:5.5e-05 score:22.3 best_domain_score:15.0 name:Ser_hydrolase; db:Pfam-A.hmm|PF00975.20 evalue:1.6e-06 score:27.6 best_domain_score:26.4 name:Thioesterase;
sprot_desc Biotin biosynthesis bifunctional protein BioHC;
sprot_id sp|B3PI89|BIOHC_CELJU;
sprot_target db:uniprot_sprot|sp|B3PI89|BIOHC_CELJU 21 273 evalue:5.4e-12 qcov:89.10 identity:27.70;
76981 76358 CDS
ID metaerg.pl|06950
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196901.1 9 206 evalue:1.2e-91 qcov:95.70 identity:84.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00188;
pfam_desc Cysteine-rich secretory protein family;
pfam_id CAP;
pfam_target db:Pfam-A.hmm|PF00188.26 evalue:1.2e-08 score:35.1 best_domain_score:34.8 name:CAP;
77363 77887 CDS
ID metaerg.pl|06951
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092399.1 1 174 evalue:1.9e-82 qcov:100.00 identity:90.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF02643;
pfam_desc Uncharacterized ACR, COG1430;
pfam_id DUF192;
pfam_target db:Pfam-A.hmm|PF02643.15 evalue:2e-31 score:107.2 best_domain_score:106.8 name:DUF192;
sp YES;
77363 77416 lipoprotein_signal_peptide
ID metaerg.pl|06952
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
78335 78577 CDS
ID metaerg.pl|06953
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092400.1 6 80 evalue:6.5e-33 qcov:93.80 identity:94.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF11165;
pfam_desc Protein of unknown function (DUF2949);
pfam_id DUF2949;
pfam_target db:Pfam-A.hmm|PF11165.8 evalue:4.7e-32 score:109.3 best_domain_score:109.1 name:DUF2949;
80096 78939 CDS
ID metaerg.pl|06954
allec_ids 1.12.-.-;
allgo_ids GO:0030170; GO:0005737; GO:0016491;
allko_ids K00839;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092401.1 1 384 evalue:5.0e-208 qcov:99.70 identity:95.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF00266; PF01053;
pfam_desc Aminotransferase class-V; Cys/Met metabolism PLP-dependent enzyme;
pfam_id Aminotran_5; Cys_Met_Meta_PP;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:8e-71 score:238.2 best_domain_score:237.8 name:Aminotran_5; db:Pfam-A.hmm|PF01053.20 evalue:4.3e-06 score:24.7 best_domain_score:24.0 name:Cys_Met_Meta_PP;
sprot_desc Soluble hydrogenase 42 kDa subunit;
sprot_id sp|P16421|DHSS_ANACY;
sprot_target db:uniprot_sprot|sp|P16421|DHSS_ANACY 1 382 evalue:1.1e-188 qcov:99.20 identity:85.10;
80869 80621 CDS
ID metaerg.pl|06955
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__PCC-7507;s__PCC-7507 sp000316575;
genomedb_acc GCF_000316575.1;
genomedb_target db:genomedb|GCF_000316575.1|WP_015131587.1 1 82 evalue:5.4e-35 qcov:100.00 identity:91.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF17275;
pfam_desc Family of unknown function (DUF5340);
pfam_id DUF5340;
pfam_target db:Pfam-A.hmm|PF17275.2 evalue:2.3e-36 score:123.0 best_domain_score:122.8 name:DUF5340;
sprot_desc Uncharacterized 9.3 kDa protein in soluble hydrogenase 5'region;
sprot_id sp|P16420|YHYD_ANACY;
sprot_target db:uniprot_sprot|sp|P16420|YHYD_ANACY 1 82 evalue:1.6e-30 qcov:100.00 identity:74.40;
81870 80962 CDS
ID metaerg.pl|06956
allec_ids 4.1.1.48;
allgo_ids GO:0004425; GO:0000162;
allko_ids K01609; K13498; K01817;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092403.1 1 302 evalue:7.4e-146 qcov:100.00 identity:90.10;
kegg_pathway_id 02020; 00400;
kegg_pathway_name Two-component system - General; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id TRPSYN-PWY; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00218;
pfam_desc Indole-3-glycerol phosphate synthase;
pfam_id IGPS;
pfam_target db:Pfam-A.hmm|PF00218.21 evalue:2.6e-87 score:291.4 best_domain_score:291.2 name:IGPS;
sprot_desc Indole-3-glycerol phosphate synthase;
sprot_id sp|B7K0H0|TRPC_CYAP8;
sprot_target db:uniprot_sprot|sp|B7K0H0|TRPC_CYAP8 1 292 evalue:1.1e-108 qcov:96.70 identity:69.20;
83387 81960 CDS
ID metaerg.pl|06957
allec_ids 1.8.1.4;
allgo_ids GO:0016491; GO:0055114; GO:0005886; GO:0004148; GO:0009055; GO:0050660; GO:0045454; GO:0006096;
allko_ids K00382; K00383;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092405.1 1 475 evalue:9.8e-262 qcov:100.00 identity:97.50;
kegg_pathway_id 00620; 00251; 00252; 00020; 00260; 00010; 00480; 00280;
kegg_pathway_name Pyruvate metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Glycolysis / Gluconeogenesis; Glutathione metabolism; Valine, leucine and isoleucine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id PWY-5173; PWY-5084; PYRUVDEHYD-PWY; GLYCLEAV-PWY; PWY-5046; PWY-5464;
metacyc_pathway_name superpathway of acetyl-CoA biosynthesis;; 2-oxoglutarate decarboxylation to succinyl-CoA;; pyruvate decarboxylation to acetyl CoA;; glycine cleavage;; 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; Super-Pathways;; Respiration;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; GLYCINE-DEG;; Respiration;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF01134; PF00070; PF07992; PF02852;
pfam_desc Glucose inhibited division protein A; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id GIDA; Pyr_redox; Pyr_redox_2; Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF01134.22 evalue:3.6e-07 score:28.8 best_domain_score:28.8 name:GIDA; db:Pfam-A.hmm|PF00070.27 evalue:3.1e-13 score:49.3 best_domain_score:45.6 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.1e-64 score:217.7 best_domain_score:217.1 name:Pyr_redox_2; db:Pfam-A.hmm|PF02852.22 evalue:6.3e-34 score:115.8 best_domain_score:114.8 name:Pyr_redox_dim;
sprot_desc Dihydrolipoyl dehydrogenase;
sprot_id sp|P72740|DLDH_SYNY3;
sprot_target db:uniprot_sprot|sp|P72740|DLDH_SYNY3 1 474 evalue:2.2e-204 qcov:99.80 identity:74.50;
tigrfam_acc TIGR01350;
tigrfam_desc dihydrolipoyl dehydrogenase;
tigrfam_name lipoamide_DH;
tigrfam_target db:TIGRFAMs.hmm|TIGR01350 evalue:1.2e-128 score:428.9 best_domain_score:428.7 name:TIGR01350;
83943 85301 CDS
ID metaerg.pl|06958
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092406.1 1 452 evalue:1.7e-226 qcov:100.00 identity:86.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
sp YES;
83943 84032 signal_peptide
ID metaerg.pl|06959
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
85898 85470 CDS
ID metaerg.pl|06960
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae;g__Planktothrix;s__Planktothrix sp003456035;
genomedb_acc GCA_003456035.1;
genomedb_target db:genomedb|GCA_003456035.1|HAN73415.1 1 142 evalue:8.7e-65 qcov:100.00 identity:86.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF01724;
pfam_desc Domain of unknown function DUF29;
pfam_id DUF29;
pfam_target db:Pfam-A.hmm|PF01724.16 evalue:1.6e-50 score:170.1 best_domain_score:170.0 name:DUF29;
86380 86308 tRNA
ID metaerg.pl|06961
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
name tRNA_Arg_ccg;
87627 86407 CDS
ID metaerg.pl|06962
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092408.1 13 406 evalue:3.3e-194 qcov:97.00 identity:90.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:2.6e-36 score:122.9 best_domain_score:122.1 name:Peptidase_M23;
tm_num 1;
87627 86407 transmembrane_helix
ID metaerg.pl|06963
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology i86473-86541o;
89018 87705 CDS
ID metaerg.pl|06964
allec_ids 2.1.1.74;
allgo_ids GO:0005737; GO:0030698; GO:0050660; GO:0047151;
allko_ids K04094;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092410.1 1 437 evalue:1.0e-252 qcov:100.00 identity:98.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF01134;
pfam_desc Glucose inhibited division protein A;
pfam_id GIDA;
pfam_target db:Pfam-A.hmm|PF01134.22 evalue:3.3e-110 score:368.1 best_domain_score:367.8 name:GIDA;
sprot_desc Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO;
sprot_id sp|Q3MA89|TRMFO_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MA89|TRMFO_ANAVT 1 435 evalue:3.8e-235 qcov:99.50 identity:91.00;
tigrfam_acc TIGR00137;
tigrfam_desc tRNA:m(5)U-54 methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name gid_trmFO;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00137 evalue:1.2e-217 score:722.0 best_domain_score:721.8 name:TIGR00137;
89185 89367 CDS
ID metaerg.pl|06965
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196886.1 1 58 evalue:1.1e-16 qcov:96.70 identity:86.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
tm_num 1;
89185 89367 transmembrane_helix
ID metaerg.pl|06966
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
topology i89203-89271o;
89541 89807 CDS
ID metaerg.pl|06967
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092412.1 1 86 evalue:1.2e-35 qcov:97.70 identity:87.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
90284 91360 CDS
ID metaerg.pl|06968
allec_ids 2.4.2.18;
allgo_ids GO:0016757; GO:0004048; GO:0000287; GO:0000162;
allko_ids K01658; K13497; K00766;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092414.1 10 358 evalue:9.2e-172 qcov:97.50 identity:93.40;
kegg_pathway_id 00400; 02020;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id TRPSYN-PWY; COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF00591; PF02885;
pfam_desc Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain;
pfam_id Glycos_transf_3; Glycos_trans_3N;
pfam_target db:Pfam-A.hmm|PF00591.21 evalue:2.4e-81 score:272.3 best_domain_score:271.9 name:Glycos_transf_3; db:Pfam-A.hmm|PF02885.17 evalue:6.9e-11 score:41.1 best_domain_score:40.0 name:Glycos_trans_3N;
sprot_desc Anthranilate phosphoribosyltransferase;
sprot_id sp|Q3M4T0|TRPD_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M4T0|TRPD_ANAVT 1 358 evalue:8.5e-156 qcov:100.00 identity:79.80;
tigrfam_acc TIGR01245;
tigrfam_desc anthranilate phosphoribosyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpD;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01245 evalue:2.4e-115 score:384.5 best_domain_score:384.3 name:TIGR01245;
92339 91290 CDS
ID metaerg.pl|06969
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092415.1 1 349 evalue:1.0e-159 qcov:100.00 identity:87.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
pfam_acc PF13650; PF13975;
pfam_desc Aspartyl protease; gag-polyprotein putative aspartyl protease;
pfam_id Asp_protease_2; gag-asp_proteas;
pfam_target db:Pfam-A.hmm|PF13650.6 evalue:3.7e-16 score:58.8 best_domain_score:57.8 name:Asp_protease_2; db:Pfam-A.hmm|PF13975.6 evalue:6.6e-19 score:67.5 best_domain_score:66.7 name:gag-asp_proteas;
sp YES;
91290 91361 lipoprotein_signal_peptide
ID metaerg.pl|06970
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
92697 93863 CDS
ID metaerg.pl|06971
allec_ids 6.3.5.5;
allgo_ids GO:0016787; GO:0005524; GO:0004088; GO:0006207; GO:0044205; GO:0006526; GO:0006541;
allko_ids K01956; K01663; K01656; K00609; K11540; K01657; K02619; K03342; K01664; K01665; K01954; K01951; K13501; K01658; K01955; K13497; K13950; K11541;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092416.1 1 383 evalue:1.1e-210 qcov:98.70 identity:94.30;
kegg_pathway_id 00790; 02020; 00620; 00251; 00252; 00230; 00400; 00240; 00983;
kegg_pathway_name Folate biosynthesis; Two-component system - General; Pyruvate metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00851258; 74.0706; 0.0124554; 74.0481; 0.00156223;
metacyc_pathway_id ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; PWY0-162; ARGSYN-PWY; PWY-5154; PRPP-PWY; PWY-5686;
metacyc_pathway_name L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;;
metacyc_pathway_type ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; Super-Pathways;; UMP-Biosynthesis;;
pfam_acc PF00988; PF00117; PF07722;
pfam_desc Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; Peptidase C26;
pfam_id CPSase_sm_chain; GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00988.22 evalue:2.1e-53 score:178.8 best_domain_score:178.3 name:CPSase_sm_chain; db:Pfam-A.hmm|PF00117.28 evalue:5.1e-50 score:169.1 best_domain_score:168.7 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:3.5e-08 score:32.7 best_domain_score:23.7 name:Peptidase_C26;
sprot_desc Carbamoyl-phosphate synthase small chain;
sprot_id sp|Q8YXQ7|CARA_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YXQ7|CARA_NOSS1 1 387 evalue:5.0e-194 qcov:99.70 identity:83.70;
tigrfam_acc TIGR01368;
tigrfam_desc carbamoyl-phosphate synthase, small subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name CPSaseIIsmall;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01368 evalue:7.2e-153 score:507.9 best_domain_score:507.7 name:TIGR01368;
>Feature NODE_45_length_93872_cov_9.84915
1097 2905 CDS
ID metaerg.pl|06972
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
2912 4078 CDS
ID metaerg.pl|06973
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
4134 6005 CDS
ID metaerg.pl|06974
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
6008 6385 CDS
ID metaerg.pl|06975
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
6443 7288 CDS
ID metaerg.pl|06976
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Halorientalis;s__Halorientalis persicus;
genomedb_acc GCF_900110215.1;
genomedb_target db:genomedb|GCF_900110215.1|WP_092662097.1 1 281 evalue:1.1e-10 qcov:100.00 identity:26.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
7317 7895 CDS
ID metaerg.pl|06977
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
7970 8356 CDS
ID metaerg.pl|06978
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
8353 8775 CDS
ID metaerg.pl|06979
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
8777 9118 CDS
ID metaerg.pl|06980
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
9115 9633 CDS
ID metaerg.pl|06981
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
9635 9961 CDS
ID metaerg.pl|06982
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
10048 10341 CDS
ID metaerg.pl|06983
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
10380 11708 CDS
ID metaerg.pl|06984
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Natrialbaceae;g__Natrialba;s__Natrialba taiwanensis;
genomedb_acc GCF_000337595.1;
genomedb_target db:genomedb|GCF_000337595.1|WP_006825877.1 5 440 evalue:2.6e-107 qcov:98.60 identity:47.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
11743 12333 CDS
ID metaerg.pl|06985
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
12369 12608 CDS
ID metaerg.pl|06986
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
12628 16068 CDS
ID metaerg.pl|06987
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus jeotgali;
genomedb_acc GCF_000196895.1;
genomedb_target db:genomedb|GCF_000196895.1|WP_008415137.1 69 1140 evalue:4.0e-144 qcov:93.50 identity:33.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
pfam_acc PF10145;
pfam_desc Phage-related minor tail protein;
pfam_id PhageMin_Tail;
pfam_target db:Pfam-A.hmm|PF10145.9 evalue:3.2e-35 score:121.0 best_domain_score:121.0 name:PhageMin_Tail;
tigrfam_acc TIGR01760;
tigrfam_desc phage tail tape measure protein, TP901 family, core region;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name tape_meas_TP901;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01760 evalue:3.1e-65 score:219.6 best_domain_score:217.7 name:TIGR01760;
tm_num 6;
12628 16068 transmembrane_helix
ID metaerg.pl|06988
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology o13744-13812i13831-13899o13969-14037i14098-14166o14194-14262i14323-14391o;
16071 18035 CDS
ID metaerg.pl|06989
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus jeotgali;
genomedb_acc GCF_000196895.1;
genomedb_target db:genomedb|GCF_000196895.1|WP_008415138.1 27 651 evalue:3.6e-129 qcov:95.60 identity:41.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
18067 18957 CDS
ID metaerg.pl|06990
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
18976 22569 CDS
ID metaerg.pl|06991
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
pfam_acc PF13229; PF13385;
pfam_desc Right handed beta helix region; Concanavalin A-like lectin/glucanases superfamily;
pfam_id Beta_helix; Laminin_G_3;
pfam_target db:Pfam-A.hmm|PF13229.6 evalue:1.4e-06 score:27.5 best_domain_score:27.5 name:Beta_helix; db:Pfam-A.hmm|PF13385.6 evalue:7.2e-18 score:64.4 best_domain_score:63.5 name:Laminin_G_3;
22607 23983 CDS
ID metaerg.pl|06992
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
23976 25733 CDS
ID metaerg.pl|06993
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
pfam_acc PF13620; PF13385; PF08308;
pfam_desc Carboxypeptidase regulatory-like domain; Concanavalin A-like lectin/glucanases superfamily; PEGA domain;
pfam_id CarboxypepD_reg; Laminin_G_3; PEGA;
pfam_target db:Pfam-A.hmm|PF13620.6 evalue:1.2e-11 score:44.0 best_domain_score:35.0 name:CarboxypepD_reg; db:Pfam-A.hmm|PF13385.6 evalue:1.2e-12 score:47.5 best_domain_score:44.3 name:Laminin_G_3; db:Pfam-A.hmm|PF08308.11 evalue:8.6e-08 score:31.2 best_domain_score:20.9 name:PEGA;
25997 27499 CDS
ID metaerg.pl|06994
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
27530 28096 CDS
ID metaerg.pl|06995
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
28100 29995 CDS
ID metaerg.pl|06996
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
pfam_acc PF13385;
pfam_desc Concanavalin A-like lectin/glucanases superfamily;
pfam_id Laminin_G_3;
pfam_target db:Pfam-A.hmm|PF13385.6 evalue:3.2e-16 score:59.1 best_domain_score:59.1 name:Laminin_G_3;
30092 33112 CDS
ID metaerg.pl|06997
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
33112 33960 CDS
ID metaerg.pl|06998
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA12079;g__UBA12079;s__UBA12079 sp001029775;
genomedb_acc GCA_001029775.1;
genomedb_target db:genomedb|GCA_001029775.1|AKM84081.1 3 254 evalue:3.7e-06 qcov:89.40 identity:26.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
pfam_acc PF13385;
pfam_desc Concanavalin A-like lectin/glucanases superfamily;
pfam_id Laminin_G_3;
pfam_target db:Pfam-A.hmm|PF13385.6 evalue:1.1e-12 score:47.5 best_domain_score:43.9 name:Laminin_G_3;
33967 37929 CDS
ID metaerg.pl|06999
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
38045 38878 CDS
ID metaerg.pl|07000
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
38882 40285 CDS
ID metaerg.pl|07001
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus jeotgali;
genomedb_acc GCF_000196895.1;
genomedb_target db:genomedb|GCF_000196895.1|WP_008418296.1 11 421 evalue:3.1e-58 qcov:88.00 identity:37.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
40282 40947 CDS
ID metaerg.pl|07002
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
tm_num 3;
40282 40947 transmembrane_helix
ID metaerg.pl|07003
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology o40291-40359i40393-40461o40474-40542i;
41025 41342 CDS
ID metaerg.pl|07004
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
tm_num 2;
41025 41342 transmembrane_helix
ID metaerg.pl|07005
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology i41172-41240o41268-41327i;
41354 41800 CDS
ID metaerg.pl|07006
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
tm_num 4;
41354 41800 transmembrane_helix
ID metaerg.pl|07007
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology i41372-41431o41459-41527i41546-41599o41642-41710i;
43076 41769 CDS
ID metaerg.pl|07008
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
sp YES;
41769 41831 lipoprotein_signal_peptide
ID metaerg.pl|07009
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
43544 43326 CDS
ID metaerg.pl|07010
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
43843 44124 CDS
ID metaerg.pl|07011
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Halovenus;s__Halovenus sp003022845;
genomedb_acc GCA_003022845.1;
genomedb_target db:genomedb|GCA_003022845.1|PSQ34153.1 18 89 evalue:4.6e-14 qcov:77.40 identity:56.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
44225 45418 CDS
ID metaerg.pl|07012
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
45459 45653 CDS
ID metaerg.pl|07013
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
45650 45862 CDS
ID metaerg.pl|07014
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
45878 46063 CDS
ID metaerg.pl|07015
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
46111 46359 CDS
ID metaerg.pl|07016
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
46792 46998 CDS
ID metaerg.pl|07017
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
47430 47720 CDS
ID metaerg.pl|07018
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
47774 48091 CDS
ID metaerg.pl|07019
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
48467 48850 CDS
ID metaerg.pl|07020
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
49237 51750 CDS
ID metaerg.pl|07021
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
51969 52331 CDS
ID metaerg.pl|07022
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
52403 52864 CDS
ID metaerg.pl|07023
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
53497 53240 CDS
ID metaerg.pl|07024
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
53728 54069 CDS
ID metaerg.pl|07025
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
54066 54497 CDS
ID metaerg.pl|07026
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
54631 54843 CDS
ID metaerg.pl|07027
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
54845 55432 CDS
ID metaerg.pl|07028
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
55504 56550 CDS
ID metaerg.pl|07029
allgo_ids GO:0005975; GO:0016810;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066381444.1 2 346 evalue:1.1e-89 qcov:99.10 identity:51.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
pfam_acc PF01522;
pfam_desc Polysaccharide deacetylase;
pfam_id Polysacc_deac_1;
pfam_target db:Pfam-A.hmm|PF01522.21 evalue:6.5e-12 score:44.7 best_domain_score:36.6 name:Polysacc_deac_1;
sp YES;
55504 55563 lipoprotein_signal_peptide
ID metaerg.pl|07030
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
56603 57247 CDS
ID metaerg.pl|07031
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
57315 59147 CDS
ID metaerg.pl|07032
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
59144 59437 CDS
ID metaerg.pl|07033
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
59434 59745 CDS
ID metaerg.pl|07034
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
59926 60531 CDS
ID metaerg.pl|07035
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
60840 61166 CDS
ID metaerg.pl|07036
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
61111 61599 CDS
ID metaerg.pl|07037
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
pfam_acc PF07381; PF03551;
pfam_desc Winged helix DNA-binding domain (DUF1495); Transcriptional regulator PadR-like family;
pfam_id DUF1495; PadR;
pfam_target db:Pfam-A.hmm|PF07381.11 evalue:3.6e-06 score:26.0 best_domain_score:25.2 name:DUF1495; db:Pfam-A.hmm|PF03551.14 evalue:1.9e-15 score:55.8 best_domain_score:54.5 name:PadR;
61592 62074 CDS
ID metaerg.pl|07038
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
62096 62659 CDS
ID metaerg.pl|07039
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
63291 63061 CDS
ID metaerg.pl|07040
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
63705 64145 CDS
ID metaerg.pl|07041
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
64142 66271 CDS
ID metaerg.pl|07042
allec_ids 3.6.4.12;
allgo_ids GO:0003677; GO:0005524; GO:0006270; GO:0042555; GO:0005634; GO:0003688; GO:0004386; GO:0042802; GO:0003697;
allko_ids K10726;
genomedb_OC d__Viruses;no__dsDNA viruses, no RNA stage;no__unclassified archaeal dsDNA viruses;no__Haloviruses;s__Halovirus HSTV-1;;
genomedb_acc GCF_000907675.1;
genomedb_target db:genomedb|GCF_000907675.1|YP_008083095.1 14 702 evalue:3.2e-139 qcov:97.20 identity:40.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
pfam_acc PF00493; PF17855; PF17207;
pfam_desc MCM P-loop domain; MCM AAA-lid domain; MCM OB domain;
pfam_id MCM; MCM_lid; MCM_OB;
pfam_target db:Pfam-A.hmm|PF00493.23 evalue:1.7e-52 score:177.0 best_domain_score:176.5 name:MCM; db:Pfam-A.hmm|PF17855.1 evalue:2.1e-21 score:75.4 best_domain_score:74.5 name:MCM_lid; db:Pfam-A.hmm|PF17207.3 evalue:4.1e-13 score:48.5 best_domain_score:47.8 name:MCM_OB;
sprot_desc Minichromosome maintenance protein MCM;
sprot_id sp|Q9UXG1|MCM_SACS2;
sprot_target db:uniprot_sprot|sp|Q9UXG1|MCM_SACS2 40 709 evalue:5.0e-59 qcov:94.50 identity:27.00;
66268 66900 CDS
ID metaerg.pl|07043
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Haloferacaceae;g__Halogeometricum;s__Halogeometricum pallidum;
genomedb_acc GCF_000337095.1;
genomedb_target db:genomedb|GCF_000337095.1|WP_008386695.1 1 202 evalue:4.8e-51 qcov:96.20 identity:47.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
66897 67916 CDS
ID metaerg.pl|07044
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
67913 68119 CDS
ID metaerg.pl|07045
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
tm_num 2;
67913 68119 transmembrane_helix
ID metaerg.pl|07046
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology o67955-68023i68042-68101o;
68116 68949 CDS
ID metaerg.pl|07047
allec_ids 2.1.1.148;
allgo_ids GO:0006231; GO:0050660; GO:0050797; GO:0006235;
allko_ids K03465;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Halorientalis;s__Halorientalis regularis;
genomedb_acc GCF_900102305.1;
genomedb_target db:genomedb|GCF_900102305.1|WP_092686502.1 31 277 evalue:9.3e-87 qcov:89.20 identity:64.30;
kegg_pathway_id 00670; 00240;
kegg_pathway_name One carbon pool by folate; Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
metacyc_pathway_id PWY-6545;
metacyc_pathway_name pyrimidine deoxyribonucleotides de novo biosynthesis III;;
metacyc_pathway_type Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;;
pfam_acc PF02511;
pfam_desc Thymidylate synthase complementing protein;
pfam_id Thy1;
pfam_target db:Pfam-A.hmm|PF02511.15 evalue:1.9e-52 score:177.0 best_domain_score:176.8 name:Thy1;
sprot_desc Flavin-dependent thymidylate synthase;
sprot_id sp|Q5V325|THYX_HALMA;
sprot_target db:uniprot_sprot|sp|Q5V325|THYX_HALMA 33 277 evalue:2.2e-79 qcov:88.40 identity:60.00;
tigrfam_acc TIGR02170;
tigrfam_desc thymidylate synthase, flavin-dependent;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name thyX;
tigrfam_sub1role 2'-Deoxyribonucleotide metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR02170 evalue:2.8e-60 score:202.6 best_domain_score:202.1 name:TIGR02170;
68946 69206 CDS
ID metaerg.pl|07048
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
69203 69637 CDS
ID metaerg.pl|07049
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
69637 70053 CDS
ID metaerg.pl|07050
allec_ids 3.1.22.4;
allgo_ids GO:0008821; GO:0003677; GO:0000287; GO:0006310; GO:0006281;
allko_ids K03552;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus jeotgali;
genomedb_acc GCF_000196895.1;
genomedb_target db:genomedb|GCF_000196895.1|WP_008418464.1 1 138 evalue:9.7e-45 qcov:100.00 identity:65.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
pfam_acc PF01870;
pfam_desc Archaeal holliday junction resolvase (hjc);
pfam_id Hjc;
pfam_target db:Pfam-A.hmm|PF01870.18 evalue:4.3e-26 score:90.0 best_domain_score:89.6 name:Hjc;
sprot_desc Holliday junction resolvase Hjc;
sprot_id sp|D4GZB4|HJC_HALVD;
sprot_target db:uniprot_sprot|sp|D4GZB4|HJC_HALVD 2 136 evalue:4.6e-41 qcov:97.80 identity:60.70;
70031 70360 CDS
ID metaerg.pl|07051
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
tm_num 2;
70031 70360 transmembrane_helix
ID metaerg.pl|07052
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology i70148-70207o70217-70285i;
70357 70671 CDS
ID metaerg.pl|07053
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
71200 70685 CDS
ID metaerg.pl|07054
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
71345 72250 CDS
ID metaerg.pl|07055
allgo_ids GO:0005524; GO:0016491; GO:0055114;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Haloadaptaceae;g__Haladaptatus;s__Haladaptatus cibarius;
genomedb_acc GCF_000710615.1;
genomedb_target db:genomedb|GCF_000710615.1|WP_084157182.1 18 273 evalue:2.7e-84 qcov:85.00 identity:60.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
pfam_acc PF13614; PF01656; PF00142; PF10609;
pfam_desc AAA domain; CobQ/CobB/MinD/ParA nucleotide binding domain; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; NUBPL iron-transfer P-loop NTPase;
pfam_id AAA_31; CbiA; Fer4_NifH; ParA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:9.4e-38 score:129.1 best_domain_score:128.7 name:AAA_31; db:Pfam-A.hmm|PF01656.23 evalue:4.3e-14 score:51.9 best_domain_score:51.5 name:CbiA; db:Pfam-A.hmm|PF00142.18 evalue:3.5e-08 score:32.4 best_domain_score:25.4 name:Fer4_NifH; db:Pfam-A.hmm|PF10609.9 evalue:9.5e-07 score:27.7 best_domain_score:26.1 name:ParA;
72250 72669 CDS
ID metaerg.pl|07056
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Haloarcula;s__Haloarcula japonica;
genomedb_acc GCF_000336635.1;
genomedb_target db:genomedb|GCF_000336635.1|WP_004592165.1 1 139 evalue:1.5e-13 qcov:100.00 identity:39.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
72666 73169 CDS
ID metaerg.pl|07057
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
tm_num 2;
72666 73169 transmembrane_helix
ID metaerg.pl|07058
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology i72969-73037o73074-73142i;
73166 73369 CDS
ID metaerg.pl|07059
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
73362 73604 CDS
ID metaerg.pl|07060
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
tm_num 2;
73362 73604 transmembrane_helix
ID metaerg.pl|07061
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology i73380-73448o73491-73559i;
73625 73873 CDS
ID metaerg.pl|07062
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
tm_num 2;
73625 73873 transmembrane_helix
ID metaerg.pl|07063
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology i73628-73696o73709-73777i;
74046 74252 CDS
ID metaerg.pl|07064
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
tm_num 2;
74046 74252 transmembrane_helix
ID metaerg.pl|07065
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology i74064-74132o74175-74243i;
75076 74381 CDS
ID metaerg.pl|07066
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
75202 75417 CDS
ID metaerg.pl|07067
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
75613 76869 CDS
ID metaerg.pl|07068
allko_ids K00123;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus jeotgali;
genomedb_acc GCF_000196895.1;
genomedb_target db:genomedb|GCF_000196895.1|WP_013199692.1 74 418 evalue:7.2e-83 qcov:82.50 identity:45.50;
kegg_pathway_id 00630; 00680;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Methane metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
sp YES;
tm_num 1;
75613 75756 signal_peptide
ID metaerg.pl|07069
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
75613 76869 transmembrane_helix
ID metaerg.pl|07070
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology i75673-75741o;
77339 77593 CDS
ID metaerg.pl|07071
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
77659 77970 CDS
ID metaerg.pl|07072
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
78049 78264 CDS
ID metaerg.pl|07073
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
78267 78557 CDS
ID metaerg.pl|07074
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
78554 78865 CDS
ID metaerg.pl|07075
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
78945 79517 CDS
ID metaerg.pl|07076
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
80500 79871 CDS
ID metaerg.pl|07077
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
sp YES;
79871 79936 lipoprotein_signal_peptide
ID metaerg.pl|07078
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
80779 80531 CDS
ID metaerg.pl|07079
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
tm_num 3;
80779 80531 transmembrane_helix
ID metaerg.pl|07080
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology o80558-80611i80630-80683o80711-80770i;
81044 80832 CDS
ID metaerg.pl|07081
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
81274 81777 CDS
ID metaerg.pl|07082
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
tm_num 3;
81274 81777 transmembrane_helix
ID metaerg.pl|07083
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology i81451-81504o81562-81630i81649-81717o;
81790 83595 CDS
ID metaerg.pl|07084
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066385586.1 73 601 evalue:2.2e-77 qcov:88.00 identity:37.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
sp YES;
tm_num 7;
81790 81930 signal_peptide
ID metaerg.pl|07085
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
81790 83595 transmembrane_helix
ID metaerg.pl|07086
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology i81850-81918o82540-82608i82627-82686o82807-82875i82894-82962o82990-83058i83119-83187o;
83601 87239 CDS
ID metaerg.pl|07087
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066385584.1 74 1212 evalue:0.0e+00 qcov:94.00 identity:63.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
pfam_acc PF01935;
pfam_desc Helicase HerA, central domain;
pfam_id DUF87;
pfam_target db:Pfam-A.hmm|PF01935.17 evalue:1.7e-05 score:24.3 best_domain_score:23.2 name:DUF87;
tm_num 2;
83601 87239 transmembrane_helix
ID metaerg.pl|07088
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology o83673-83741i83754-83822o;
87239 87460 CDS
ID metaerg.pl|07089
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
sp YES;
tm_num 1;
87239 87343 signal_peptide
ID metaerg.pl|07090
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
87239 87460 transmembrane_helix
ID metaerg.pl|07091
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
topology o87281-87349i;
87457 88119 CDS
ID metaerg.pl|07092
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
sp YES;
87457 87546 signal_peptide
ID metaerg.pl|07093
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
88112 89464 CDS
ID metaerg.pl|07094
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066385583.1 1 447 evalue:1.0e-167 qcov:99.30 identity:65.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
89479 92496 CDS
ID metaerg.pl|07095
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066385582.1 1 1002 evalue:5.9e-208 qcov:99.70 identity:42.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
pfam_acc PF12696; PF10412;
pfam_desc TraM recognition site of TraD and TraG; Type IV secretion-system coupling protein DNA-binding domain;
pfam_id TraG-D_C; TrwB_AAD_bind;
pfam_target db:Pfam-A.hmm|PF12696.7 evalue:2.3e-06 score:26.9 best_domain_score:25.0 name:TraG-D_C; db:Pfam-A.hmm|PF10412.9 evalue:1e-08 score:33.7 best_domain_score:16.9 name:TrwB_AAD_bind;
92822 92511 CDS
ID metaerg.pl|07096
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Haloferacaceae;g__Haloferax;s__Haloferax mucosum;
genomedb_acc GCF_000337815.1;
genomedb_target db:genomedb|GCF_000337815.1|WP_004516819.1 11 98 evalue:2.6e-18 qcov:85.40 identity:51.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
93025 92819 CDS
ID metaerg.pl|07097
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
93249 93022 CDS
ID metaerg.pl|07098
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.6058; 0.0031156; 16.6089; ;
>Feature NODE_46_length_92743_cov_8.32321
219 779 CDS
ID metaerg.pl|07099
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
853 1206 CDS
ID metaerg.pl|07100
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
1341 3725 CDS
ID metaerg.pl|07101
allgo_ids GO:0005524;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF00004; PF13191; PF07724; PF07728; PF17871; PF05621;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA ATPase domain; AAA domain (Cdc48 subfamily); AAA domain (dynein-related subfamily); AAA lid domain; Bacterial TniB protein;
pfam_id AAA; AAA_16; AAA_2; AAA_5; AAA_lid_9; TniB;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:4.1e-15 score:55.6 best_domain_score:54.1 name:AAA; db:Pfam-A.hmm|PF13191.6 evalue:1.7e-08 score:34.3 best_domain_score:29.5 name:AAA_16; db:Pfam-A.hmm|PF07724.14 evalue:8.3e-06 score:25.3 best_domain_score:16.6 name:AAA_2; db:Pfam-A.hmm|PF07728.14 evalue:2e-08 score:33.6 best_domain_score:25.1 name:AAA_5; db:Pfam-A.hmm|PF17871.1 evalue:7e-07 score:28.4 best_domain_score:26.9 name:AAA_lid_9; db:Pfam-A.hmm|PF05621.11 evalue:1e-05 score:24.3 best_domain_score:17.8 name:TniB;
5349 3712 CDS
ID metaerg.pl|07102
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234592.1 14 545 evalue:2.5e-80 qcov:97.60 identity:35.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
tm_num 1;
3712 3861 signal_peptide
ID metaerg.pl|07103
Note TAT;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
5349 3712 transmembrane_helix
ID metaerg.pl|07104
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i3766-3834o;
5846 5346 CDS
ID metaerg.pl|07105
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
5346 5405 signal_peptide
ID metaerg.pl|07106
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
6609 5926 CDS
ID metaerg.pl|07107
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
tm_num 5;
5926 5991 signal_peptide
ID metaerg.pl|07108
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
6609 5926 transmembrane_helix
ID metaerg.pl|07109
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology o5935-5988i6022-6090o6103-6156i6376-6444o6535-6603i;
7685 6609 CDS
ID metaerg.pl|07110
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234579.1 3 355 evalue:4.1e-95 qcov:98.60 identity:47.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF00482;
pfam_desc Type II secretion system (T2SS), protein F;
pfam_id T2SSF;
pfam_target db:Pfam-A.hmm|PF00482.23 evalue:1.1e-22 score:79.5 best_domain_score:44.4 name:T2SSF;
tm_num 3;
7685 6609 transmembrane_helix
ID metaerg.pl|07111
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i6981-7049o7146-7214i7593-7661o;
9253 7682 CDS
ID metaerg.pl|07112
allgo_ids GO:0005737; GO:0005886; GO:0015627; GO:0005524; GO:0016887; GO:0019534; GO:0015628;
allko_ids K02454;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234581.1 6 522 evalue:3.1e-176 qcov:98.90 identity:60.70;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF00437;
pfam_desc Type II/IV secretion system protein;
pfam_id T2SSE;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:2.7e-32 score:111.2 best_domain_score:110.7 name:T2SSE;
sprot_desc Type II secretion system protein E;
sprot_id sp|P37093|GSPE_VIBCH;
sprot_target db:uniprot_sprot|sp|P37093|GSPE_VIBCH 78 491 evalue:7.5e-36 qcov:79.20 identity:30.50;
10216 9311 CDS
ID metaerg.pl|07113
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
9311 9400 signal_peptide
ID metaerg.pl|07114
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
11676 10213 CDS
ID metaerg.pl|07115
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234583.1 19 483 evalue:6.4e-67 qcov:95.50 identity:30.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF06864;
pfam_desc Pilin accessory protein (PilO);
pfam_id PAP_PilO;
pfam_target db:Pfam-A.hmm|PF06864.12 evalue:4.2e-20 score:71.2 best_domain_score:70.8 name:PAP_PilO;
13231 11696 CDS
ID metaerg.pl|07116
allgo_ids GO:0009306; GO:0009279; GO:0009297;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter caeni;
genomedb_acc GCF_003054195.1;
genomedb_target db:genomedb|GCF_003054195.1|WP_108127758.1 7 511 evalue:3.2e-117 qcov:98.80 identity:47.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF00263;
pfam_desc Bacterial type II and III secretion system protein;
pfam_id Secretin;
pfam_target db:Pfam-A.hmm|PF00263.21 evalue:1.2e-13 score:50.3 best_domain_score:50.3 name:Secretin;
sp YES;
sprot_desc Outer membrane lipoprotein BfpB;
sprot_id sp|Q9S142|BFPB_ECO11;
sprot_target db:uniprot_sprot|sp|Q9S142|BFPB_ECO11 65 509 evalue:1.4e-34 qcov:87.10 identity:26.40;
11696 11722 lipoprotein_signal_peptide
ID metaerg.pl|07117
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
13886 13386 CDS
ID metaerg.pl|07118
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
tm_num 1;
13886 13386 transmembrane_helix
ID metaerg.pl|07119
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i13470-13538o;
14362 13913 CDS
ID metaerg.pl|07120
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
tm_num 1;
14362 13913 transmembrane_helix
ID metaerg.pl|07121
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i13946-14014o;
15106 14627 CDS
ID metaerg.pl|07122
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
tm_num 1;
15106 14627 transmembrane_helix
ID metaerg.pl|07123
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology o14669-14737i;
15684 15223 CDS
ID metaerg.pl|07124
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234578.1 3 153 evalue:3.6e-08 qcov:98.70 identity:34.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
tm_num 1;
15684 15223 transmembrane_helix
ID metaerg.pl|07125
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology o15265-15333i;
15912 16556 CDS
ID metaerg.pl|07126
allec_ids 2.7.4.9;
allgo_ids GO:0005524; GO:0004798; GO:0006233; GO:0006235;
allko_ids K00943;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius nubinhibens;
genomedb_acc GCF_000152625.1;
genomedb_target db:genomedb|GCF_000152625.1|WP_009812200.1 1 206 evalue:1.9e-55 qcov:96.30 identity:56.50;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
metacyc_pathway_id P1-PWY; PWY-6545; PWY0-166;
metacyc_pathway_name ; pyrimidine deoxyribonucleotides de novo biosynthesis III;; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);;
metacyc_pathway_type ; Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF13521; PF02223;
pfam_desc AAA domain; Thymidylate kinase;
pfam_id AAA_28; Thymidylate_kin;
pfam_target db:Pfam-A.hmm|PF13521.6 evalue:2e-09 score:37.1 best_domain_score:36.6 name:AAA_28; db:Pfam-A.hmm|PF02223.17 evalue:3.8e-43 score:146.6 best_domain_score:146.4 name:Thymidylate_kin;
sprot_desc Thymidylate kinase;
sprot_id sp|Q5LPV9|KTHY_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LPV9|KTHY_RUEPO 1 209 evalue:4.0e-52 qcov:97.70 identity:53.30;
tigrfam_acc TIGR00041;
tigrfam_desc dTMP kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name DTMP_kinase;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00041 evalue:3.7e-43 score:146.7 best_domain_score:146.5 name:TIGR00041;
16723 17058 CDS
ID metaerg.pl|07127
allgo_ids GO:0003677; GO:0005622; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Chromobacteriaceae;g__Vogesella;s__Vogesella sp001037925;
genomedb_acc GCF_001037925.1;
genomedb_target db:genomedb|GCF_001037925.1|WP_047967430.1 28 110 evalue:1.1e-06 qcov:74.80 identity:39.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF00816;
pfam_desc H-NS histone family;
pfam_id Histone_HNS;
pfam_target db:Pfam-A.hmm|PF00816.21 evalue:8.1e-12 score:45.0 best_domain_score:44.7 name:Histone_HNS;
17653 17075 CDS
ID metaerg.pl|07128
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
17951 17715 CDS
ID metaerg.pl|07129
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
tm_num 2;
17951 17715 transmembrane_helix
ID metaerg.pl|07130
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i17733-17801o17829-17897i;
18439 17948 CDS
ID metaerg.pl|07131
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter caeni;
genomedb_acc GCF_003054195.1;
genomedb_target db:genomedb|GCF_003054195.1|WP_108127906.1 20 161 evalue:9.5e-07 qcov:87.10 identity:28.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
tm_num 2;
18439 17948 transmembrane_helix
ID metaerg.pl|07132
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i18212-18280o18290-18358i;
19177 18443 CDS
ID metaerg.pl|07133
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234526.1 20 240 evalue:1.7e-55 qcov:90.60 identity:52.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
18443 18511 signal_peptide
ID metaerg.pl|07134
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
19913 19194 CDS
ID metaerg.pl|07135
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
19194 19256 signal_peptide
ID metaerg.pl|07136
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
20554 19961 CDS
ID metaerg.pl|07137
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234528.1 15 183 evalue:2.0e-27 qcov:85.80 identity:39.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF00565;
pfam_desc Staphylococcal nuclease homologue;
pfam_id SNase;
pfam_target db:Pfam-A.hmm|PF00565.17 evalue:1.4e-05 score:24.7 best_domain_score:24.3 name:SNase;
21083 20529 CDS
ID metaerg.pl|07138
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
21230 21817 CDS
ID metaerg.pl|07139
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_051357734.1 1 195 evalue:2.6e-43 qcov:100.00 identity:48.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF05951; PF08291;
pfam_desc Bacterial protein of unknown function (DUF882); Peptidase M15;
pfam_id Peptidase_M15_2; Peptidase_M15_3;
pfam_target db:Pfam-A.hmm|PF05951.13 evalue:4.1e-32 score:110.2 best_domain_score:109.9 name:Peptidase_M15_2; db:Pfam-A.hmm|PF08291.11 evalue:6.6e-12 score:44.7 best_domain_score:44.2 name:Peptidase_M15_3;
sp YES;
tm_num 1;
21230 21310 signal_peptide
ID metaerg.pl|07140
Note TAT;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
21230 21817 transmembrane_helix
ID metaerg.pl|07141
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i21248-21307o;
23656 21788 CDS
ID metaerg.pl|07142
allgo_ids GO:0003677; GO:0003916; GO:0006265;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234533.1 1 622 evalue:5.2e-154 qcov:100.00 identity:47.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF01131; PF01751;
pfam_desc DNA topoisomerase; Toprim domain;
pfam_id Topoisom_bac; Toprim;
pfam_target db:Pfam-A.hmm|PF01131.20 evalue:1.5e-14 score:53.0 best_domain_score:36.2 name:Topoisom_bac; db:Pfam-A.hmm|PF01751.22 evalue:1.4e-05 score:24.4 best_domain_score:23.7 name:Toprim;
23810 25450 CDS
ID metaerg.pl|07143
allec_ids 3.6.4.12;
allgo_ids GO:0005524; GO:0000785; GO:0005634; GO:0019005; GO:0043138; GO:0043140; GO:0003678; GO:0015616; GO:0003690; GO:0003697; GO:0008219; GO:0006974; GO:0000737; GO:0006281; GO:0000724; GO:0035562; GO:2000042; GO:1902231; GO:0001934; GO:0016567; GO:0000725; GO:0031297; GO:0048478; GO:0072429;
allko_ids K10300;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234536.1 1 539 evalue:7.2e-176 qcov:98.70 identity:58.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF13245; PF13604; PF00580; PF13361; PF01443;
pfam_desc AAA domain; AAA domain; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain; Viral (Superfamily 1) RNA helicase;
pfam_id AAA_19; AAA_30; UvrD-helicase; UvrD_C; Viral_helicase1;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:3.1e-14 score:52.7 best_domain_score:51.2 name:AAA_19; db:Pfam-A.hmm|PF13604.6 evalue:4.9e-08 score:32.1 best_domain_score:24.9 name:AAA_30; db:Pfam-A.hmm|PF00580.21 evalue:3.9e-17 score:62.0 best_domain_score:51.2 name:UvrD-helicase; db:Pfam-A.hmm|PF13361.6 evalue:3.6e-08 score:32.4 best_domain_score:31.9 name:UvrD_C; db:Pfam-A.hmm|PF01443.18 evalue:9.7e-06 score:24.7 best_domain_score:9.0 name:Viral_helicase1;
sprot_desc F-box DNA helicase 1;
sprot_id sp|Q8NFZ0|FBH1_HUMAN;
sprot_target db:uniprot_sprot|sp|Q8NFZ0|FBH1_HUMAN 24 499 evalue:1.0e-35 qcov:87.20 identity:30.60;
26031 25498 CDS
ID metaerg.pl|07144
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter caeni;
genomedb_acc GCF_003054195.1;
genomedb_target db:genomedb|GCF_003054195.1|WP_108127913.1 1 176 evalue:6.2e-44 qcov:99.40 identity:53.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
tm_num 4;
26031 25498 transmembrane_helix
ID metaerg.pl|07145
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology o25555-25623i25681-25749o25831-25899i25936-26004o;
28506 26086 CDS
ID metaerg.pl|07146
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234538.1 24 805 evalue:2.7e-30 qcov:97.00 identity:28.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
tm_num 1;
28506 26086 transmembrane_helix
ID metaerg.pl|07147
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i27289-27357o;
29826 28525 CDS
ID metaerg.pl|07148
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_084299468.1 1 428 evalue:9.4e-78 qcov:98.80 identity:43.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF03743;
pfam_desc Bacterial conjugation TrbI-like protein;
pfam_id TrbI;
pfam_target db:Pfam-A.hmm|PF03743.14 evalue:2.4e-13 score:49.6 best_domain_score:47.3 name:TrbI;
tm_num 1;
29826 28525 transmembrane_helix
ID metaerg.pl|07149
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i28633-28692o;
30874 29846 CDS
ID metaerg.pl|07150
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234540.1 29 342 evalue:3.7e-85 qcov:91.80 identity:50.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF12293;
pfam_desc Putative outer membrane core complex of type IVb secretion;
pfam_id T4BSS_DotH_IcmK;
pfam_target db:Pfam-A.hmm|PF12293.8 evalue:2.2e-47 score:160.5 best_domain_score:160.3 name:T4BSS_DotH_IcmK;
sp YES;
tm_num 1;
29846 29947 signal_peptide
ID metaerg.pl|07151
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
30874 29846 transmembrane_helix
ID metaerg.pl|07152
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i29882-29950o;
31503 30871 CDS
ID metaerg.pl|07153
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234541.1 1 210 evalue:8.1e-75 qcov:100.00 identity:63.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF11393;
pfam_desc Type-IV b secretion system, inner-membrane complex component;
pfam_id T4BSS_DotI_IcmL;
pfam_target db:Pfam-A.hmm|PF11393.8 evalue:1.1e-43 score:148.0 best_domain_score:147.8 name:T4BSS_DotI_IcmL;
tm_num 1;
31503 30871 transmembrane_helix
ID metaerg.pl|07154
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i30946-31014o;
34769 31500 CDS
ID metaerg.pl|07155
allgo_ids GO:0003677; GO:0003896; GO:0006260; GO:0008270;
allko_ids K02316;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234542.1 2 1084 evalue:4.4e-225 qcov:99.40 identity:40.80;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF01807;
pfam_desc CHC2 zinc finger;
pfam_id zf-CHC2;
pfam_target db:Pfam-A.hmm|PF01807.20 evalue:1.1e-15 score:56.4 best_domain_score:55.5 name:zf-CHC2;
35209 34769 CDS
ID metaerg.pl|07156
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234543.1 23 144 evalue:3.6e-21 qcov:83.60 identity:47.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
35935 36315 CDS
ID metaerg.pl|07157
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234544.1 1 126 evalue:1.3e-27 qcov:100.00 identity:59.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
tm_num 3;
35935 36012 signal_peptide
ID metaerg.pl|07158
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
35935 36315 transmembrane_helix
ID metaerg.pl|07159
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i35953-36012o36070-36129i36190-36258o;
36330 36773 CDS
ID metaerg.pl|07160
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234545.1 15 141 evalue:8.9e-12 qcov:86.40 identity:38.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
tm_num 3;
36330 36461 signal_peptide
ID metaerg.pl|07161
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
36330 36773 transmembrane_helix
ID metaerg.pl|07162
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i36411-36464o36522-36590i36648-36716o;
36786 37508 CDS
ID metaerg.pl|07163
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234546.1 1 225 evalue:7.6e-45 qcov:93.80 identity:43.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
37508 38956 CDS
ID metaerg.pl|07164
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234547.1 2 480 evalue:6.5e-104 qcov:99.40 identity:40.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
39011 42088 CDS
ID metaerg.pl|07165
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_051357735.1 1 1023 evalue:0.0e+00 qcov:99.80 identity:59.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
42128 42871 CDS
ID metaerg.pl|07166
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
tm_num 1;
42128 42265 signal_peptide
ID metaerg.pl|07167
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
42128 42871 transmembrane_helix
ID metaerg.pl|07168
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i42161-42220o;
42883 44229 CDS
ID metaerg.pl|07169
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
42883 42936 signal_peptide
ID metaerg.pl|07170
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
44376 44930 CDS
ID metaerg.pl|07171
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
tm_num 2;
44376 44930 transmembrane_helix
ID metaerg.pl|07172
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i44697-44765o44778-44846i;
45050 45616 CDS
ID metaerg.pl|07173
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
tm_num 1;
45050 45118 lipoprotein_signal_peptide
ID metaerg.pl|07174
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
45050 45616 transmembrane_helix
ID metaerg.pl|07175
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology o45062-45130i;
45722 46264 CDS
ID metaerg.pl|07176
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
48580 46265 CDS
ID metaerg.pl|07177
allec_ids 2.4.1.129; 3.4.16.4;
allgo_ids GO:0008658; GO:0016021; GO:0005886; GO:0008144; GO:0042802; GO:0008955; GO:0009002; GO:0071555; GO:0009252; GO:0008360; GO:0046677;
allko_ids K04478; K08282; K05366; K05367; K08884; K05365; K03587; K12555;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234554.1 6 766 evalue:5.5e-145 qcov:98.70 identity:41.50;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
metacyc_pathway_id PWY-5265; PWY-6385; PWY-6470; PWY-6471; PEPTIDOGLYCANSYN-PWY;
metacyc_pathway_name peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00912; PF00905;
pfam_desc Transglycosylase; Penicillin binding protein transpeptidase domain;
pfam_id Transgly; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF00912.22 evalue:1.6e-42 score:144.2 best_domain_score:143.7 name:Transgly; db:Pfam-A.hmm|PF00905.22 evalue:1.5e-18 score:66.3 best_domain_score:63.3 name:Transpeptidase;
sp YES;
sprot_desc Penicillin-binding protein 1A;
sprot_id sp|O66874|PBPA_AQUAE;
sprot_target db:uniprot_sprot|sp|O66874|PBPA_AQUAE 7 692 evalue:5.8e-61 qcov:89.00 identity:28.70;
46265 46366 signal_peptide
ID metaerg.pl|07178
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
48717 51275 CDS
ID metaerg.pl|07179
allec_ids 3.6.4.12;
allgo_ids GO:0005524; GO:0005737; GO:0004003; GO:0003677; GO:0006268;
allko_ids K03657;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_036796934.1 5 844 evalue:2.7e-238 qcov:98.60 identity:54.20;
kegg_pathway_id 03430; 03420;
kegg_pathway_name Mismatch repair; Nucleotide excision repair;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF13245; PF00580; PF13361; PF13538;
pfam_desc AAA domain; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain; UvrD-like helicase C-terminal domain;
pfam_id AAA_19; UvrD-helicase; UvrD_C; UvrD_C_2;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:3e-24 score:85.3 best_domain_score:80.8 name:AAA_19; db:Pfam-A.hmm|PF00580.21 evalue:1.8e-58 score:197.8 best_domain_score:195.8 name:UvrD-helicase; db:Pfam-A.hmm|PF13361.6 evalue:3e-37 score:128.0 best_domain_score:125.4 name:UvrD_C; db:Pfam-A.hmm|PF13538.6 evalue:7.1e-09 score:34.6 best_domain_score:32.4 name:UvrD_C_2;
sprot_desc ATP-dependent DNA helicase PcrA;
sprot_id sp|Q5HN29|PCRA_STAEQ;
sprot_target db:uniprot_sprot|sp|Q5HN29|PCRA_STAEQ 7 767 evalue:9.9e-70 qcov:89.30 identity:28.20;
51299 52597 CDS
ID metaerg.pl|07180
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF18821;
pfam_desc Large polyvalent protein-associated domain 7;
pfam_id LPD7;
pfam_target db:Pfam-A.hmm|PF18821.1 evalue:4.1e-07 score:29.3 best_domain_score:27.9 name:LPD7;
52605 53777 CDS
ID metaerg.pl|07181
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
54612 53785 CDS
ID metaerg.pl|07182
allgo_ids GO:0005524; GO:0006270; GO:0006275; GO:0043565;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_084299472.1 50 260 evalue:3.3e-20 qcov:76.70 identity:31.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF08299;
pfam_desc Bacterial dnaA protein helix-turn-helix;
pfam_id Bac_DnaA_C;
pfam_target db:Pfam-A.hmm|PF08299.11 evalue:1.5e-15 score:56.2 best_domain_score:55.5 name:Bac_DnaA_C;
54720 56267 CDS
ID metaerg.pl|07183
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234559.1 11 515 evalue:3.4e-127 qcov:98.10 identity:49.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
56785 56309 CDS
ID metaerg.pl|07184
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
58243 56921 CDS
ID metaerg.pl|07185
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234569.1 11 422 evalue:3.9e-63 qcov:93.60 identity:36.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
58831 59319 CDS
ID metaerg.pl|07186
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter caeni;
genomedb_acc GCF_003054195.1;
genomedb_target db:genomedb|GCF_003054195.1|WP_108127937.1 6 162 evalue:4.2e-47 qcov:96.90 identity:63.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF16816;
pfam_desc DotD protein;
pfam_id DotD;
pfam_target db:Pfam-A.hmm|PF16816.5 evalue:1e-21 score:76.3 best_domain_score:76.0 name:DotD;
sp YES;
58831 58884 lipoprotein_signal_peptide
ID metaerg.pl|07187
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
59322 60272 CDS
ID metaerg.pl|07188
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_084299474.1 5 313 evalue:1.1e-104 qcov:97.80 identity:64.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF16932;
pfam_desc Type IV secretory system, conjugal DNA-protein transfer;
pfam_id T4SS_TraI;
pfam_target db:Pfam-A.hmm|PF16932.5 evalue:3.1e-50 score:169.5 best_domain_score:169.2 name:T4SS_TraI;
sp YES;
59322 59372 lipoprotein_signal_peptide
ID metaerg.pl|07189
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
60339 61562 CDS
ID metaerg.pl|07190
allgo_ids GO:0005737; GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter caeni;
genomedb_acc GCF_003054195.1;
genomedb_target db:genomedb|GCF_003054195.1|WP_108127939.1 1 399 evalue:2.1e-140 qcov:98.00 identity:65.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF00437;
pfam_desc Type II/IV secretion system protein;
pfam_id T2SSE;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:1.9e-26 score:92.0 best_domain_score:91.4 name:T2SSE;
sprot_desc Twitching motility protein;
sprot_id sp|Q06581|PILT_NEIGO;
sprot_target db:uniprot_sprot|sp|Q06581|PILT_NEIGO 58 392 evalue:3.3e-31 qcov:82.30 identity:32.30;
61562 61972 CDS
ID metaerg.pl|07191
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_051357738.1 1 128 evalue:1.8e-30 qcov:94.10 identity:60.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
tm_num 1;
61562 61972 transmembrane_helix
ID metaerg.pl|07192
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology o61634-61723i;
61959 62483 CDS
ID metaerg.pl|07193
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234572.1 35 170 evalue:1.8e-16 qcov:78.20 identity:34.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
62499 62801 CDS
ID metaerg.pl|07194
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
tm_num 1;
62499 62564 signal_peptide
ID metaerg.pl|07195
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
62499 62801 transmembrane_helix
ID metaerg.pl|07196
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology o62508-62576i;
62798 63085 CDS
ID metaerg.pl|07197
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
63145 64221 CDS
ID metaerg.pl|07198
allko_ids K02342; K02337;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:9.9e-29 score:99.8 best_domain_score:99.3 name:DEDDh;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_051357739.1 4 338 evalue:2.0e-78 qcov:93.60 identity:44.90;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF00929;
pfam_desc Exonuclease;
pfam_id RNase_T;
pfam_target db:Pfam-A.hmm|PF00929.24 evalue:7.9e-16 score:58.3 best_domain_score:57.8 name:RNase_T;
64760 64230 CDS
ID metaerg.pl|07199
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter caeni;
genomedb_acc GCF_003054195.1;
genomedb_target db:genomedb|GCF_003054195.1|WP_108127945.1 1 162 evalue:1.4e-56 qcov:92.00 identity:65.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
65407 64835 CDS
ID metaerg.pl|07200
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
tm_num 4;
65407 64835 transmembrane_helix
ID metaerg.pl|07201
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i64901-64969o65081-65149i65207-65275o65303-65371i;
67976 65532 CDS
ID metaerg.pl|07202
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_084299478.1 14 783 evalue:1.1e-188 qcov:94.60 identity:49.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
tigrfam_acc TIGR04346;
tigrfam_desc conjugal transfer/type IV secretion protein DotA/TraY;
tigrfam_name DotA_TraY;
tigrfam_target db:TIGRFAMs.hmm|TIGR04346 evalue:3.2e-80 score:269.7 best_domain_score:266.5 name:TIGR04346;
tm_num 10;
65532 65627 signal_peptide
ID metaerg.pl|07203
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
67976 65532 transmembrane_helix
ID metaerg.pl|07204
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i65565-65633o65676-65744i65763-65831o65889-65957i67077-67145o67155-67223i67242-67310o67323-67382i67443-67511o67578-67646i;
68428 68075 CDS
ID metaerg.pl|07205
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF10671;
pfam_desc Toxin co-regulated pilus biosynthesis protein Q;
pfam_id TcpQ;
pfam_target db:Pfam-A.hmm|PF10671.9 evalue:6.3e-22 score:76.7 best_domain_score:76.4 name:TcpQ;
sp YES;
68075 68137 signal_peptide
ID metaerg.pl|07206
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
69542 68433 CDS
ID metaerg.pl|07207
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
68433 68513 signal_peptide
ID metaerg.pl|07208
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
70039 69539 CDS
ID metaerg.pl|07209
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234587.1 14 163 evalue:9.0e-21 qcov:90.40 identity:35.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
70235 70717 CDS
ID metaerg.pl|07210
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
70714 72174 CDS
ID metaerg.pl|07211
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234589.1 1 485 evalue:1.8e-138 qcov:99.80 identity:53.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
tm_num 2;
70714 72174 transmembrane_helix
ID metaerg.pl|07212
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology o70765-70818i71023-71091o;
72180 73202 CDS
ID metaerg.pl|07213
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Flammeovirgaceae;g__GCA-2729595;s__GCA-2729595 sp002729595;
genomedb_acc GCA_002729595.1;
genomedb_target db:genomedb|GCA_002729595.1|MBT28082.1 6 336 evalue:3.4e-59 qcov:97.40 identity:37.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF00437;
pfam_desc Type II/IV secretion system protein;
pfam_id T2SSE;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:2.4e-21 score:75.2 best_domain_score:74.8 name:T2SSE;
73214 74251 CDS
ID metaerg.pl|07214
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234594.1 9 264 evalue:1.4e-31 qcov:74.20 identity:39.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
73214 73306 signal_peptide
ID metaerg.pl|07215
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
74259 75380 CDS
ID metaerg.pl|07216
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234595.1 4 373 evalue:3.3e-87 qcov:99.20 identity:53.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
tm_num 1;
74259 74342 signal_peptide
ID metaerg.pl|07217
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
74259 75380 transmembrane_helix
ID metaerg.pl|07218
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i74277-74345o;
75516 79049 CDS
ID metaerg.pl|07219
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_036796947.1 1 1175 evalue:0.0e+00 qcov:99.80 identity:60.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF12696;
pfam_desc TraM recognition site of TraD and TraG;
pfam_id TraG-D_C;
pfam_target db:Pfam-A.hmm|PF12696.7 evalue:1e-05 score:24.8 best_domain_score:24.0 name:TraG-D_C;
tm_num 1;
75516 79049 transmembrane_helix
ID metaerg.pl|07220
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
topology i75645-75713o;
79046 80503 CDS
ID metaerg.pl|07221
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
79046 79123 signal_peptide
ID metaerg.pl|07222
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
80923 80558 CDS
ID metaerg.pl|07223
allgo_ids GO:0003677; GO:0005622; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__UBA6796;s__UBA6796 sp002452815;
genomedb_acc GCA_002452815.1;
genomedb_target db:genomedb|GCA_002452815.1|DKFM01000023.1_157 16 112 evalue:8.1e-11 qcov:80.20 identity:47.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF00816;
pfam_desc H-NS histone family;
pfam_id Histone_HNS;
pfam_target db:Pfam-A.hmm|PF00816.21 evalue:3.4e-18 score:65.5 best_domain_score:65.0 name:Histone_HNS;
82095 81055 CDS
ID metaerg.pl|07224
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_027234079.1 1 345 evalue:1.5e-54 qcov:99.70 identity:36.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
81055 81120 signal_peptide
ID metaerg.pl|07225
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
82254 83084 CDS
ID metaerg.pl|07226
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
82254 82310 lipoprotein_signal_peptide
ID metaerg.pl|07227
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
83203 84051 CDS
ID metaerg.pl|07228
allgo_ids GO:0016787;
allko_ids K07313; K06269; K01090;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter;s__Pseudorhodobacter wandonensis;
genomedb_acc GCF_001202035.1;
genomedb_target db:genomedb|GCF_001202035.1|WP_050521785.1 2 282 evalue:4.3e-39 qcov:99.60 identity:37.60;
kegg_pathway_id 04510;
kegg_pathway_name Focal adhesion;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:4e-14 score:52.8 best_domain_score:52.5 name:Metallophos;
84767 84102 CDS
ID metaerg.pl|07229
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
sp YES;
84102 84161 signal_peptide
ID metaerg.pl|07230
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
84917 85504 CDS
ID metaerg.pl|07231
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
86231 85509 CDS
ID metaerg.pl|07232
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Leisingera;s__Leisingera caerulea;
genomedb_acc GCF_000473325.1;
genomedb_target db:genomedb|GCF_000473325.1|WP_051357671.1 6 232 evalue:4.2e-51 qcov:94.60 identity:49.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
86457 87290 CDS
ID metaerg.pl|07233
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salipiger;s__Salipiger mucosus;
genomedb_acc GCF_000442255.1;
genomedb_target db:genomedb|GCF_000442255.1|WP_020041825.1 3 270 evalue:2.0e-33 qcov:96.80 identity:36.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
87320 87784 CDS
ID metaerg.pl|07234
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Oceanicola_B;s__Oceanicola_B litoreus;
genomedb_acc GCF_900142295.1;
genomedb_target db:genomedb|GCF_900142295.1|WP_074256277.1 28 151 evalue:3.0e-18 qcov:80.50 identity:37.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
87781 88038 CDS
ID metaerg.pl|07235
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092892534.1 1 85 evalue:2.2e-23 qcov:100.00 identity:68.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF13223;
pfam_desc Protein of unknown function (DUF4031);
pfam_id DUF4031;
pfam_target db:Pfam-A.hmm|PF13223.6 evalue:1.1e-26 score:92.0 best_domain_score:91.9 name:DUF4031;
88061 88522 CDS
ID metaerg.pl|07236
allec_ids 3.6.1.23;
allgo_ids GO:0004170; GO:0000287; GO:0006226; GO:0046080;
allko_ids K01520;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Azospirillum;s__Azospirillum thiophilum;
genomedb_acc GCF_001305595.1;
genomedb_target db:genomedb|GCF_001305595.1|WP_045581397.1 15 149 evalue:9.5e-41 qcov:88.20 identity:65.90;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
metacyc_pathway_id PWY0-166; PWY-6545;
metacyc_pathway_name superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);; pyrimidine deoxyribonucleotides de novo biosynthesis III;;
metacyc_pathway_type Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;; Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;;
pfam_acc PF00692;
pfam_desc dUTPase;
pfam_id dUTPase;
pfam_target db:Pfam-A.hmm|PF00692.19 evalue:1.6e-31 score:107.9 best_domain_score:107.7 name:dUTPase;
sprot_desc Deoxyuridine 5'-triphosphate nucleotidohydrolase;
sprot_id sp|Q39V99|DUT_GEOMG;
sprot_target db:uniprot_sprot|sp|Q39V99|DUT_GEOMG 15 149 evalue:8.9e-38 qcov:88.20 identity:61.50;
tigrfam_acc TIGR00576;
tigrfam_desc dUTP diphosphatase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name dut;
tigrfam_sub1role 2'-Deoxyribonucleotide metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR00576 evalue:3e-50 score:168.8 best_domain_score:168.7 name:TIGR00576;
88583 89164 CDS
ID metaerg.pl|07237
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
pfam_acc PF02342;
pfam_desc TerD domain;
pfam_id TerD;
pfam_target db:Pfam-A.hmm|PF02342.18 evalue:8.2e-08 score:31.2 best_domain_score:30.6 name:TerD;
89260 90606 CDS
ID metaerg.pl|07238
allec_ids 6.1.1.17;
allgo_ids GO:0004812; GO:0005524; GO:0043039; GO:0005737; GO:0004818; GO:0000049; GO:0006424;
allko_ids K01885;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105319027.1 1 436 evalue:2.3e-135 qcov:97.30 identity:53.90;
kegg_pathway_id 00860; 00251; 00970;
kegg_pathway_name Porphyrin and chlorophyll metabolism; Glutamate metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
metacyc_pathway_id PWY-5918; TRNA-CHARGING-PWY; PWY-5188;
metacyc_pathway_name superpathay of heme b biosynthesis from glutamate;; tRNA charging;; tetrapyrrole biosynthesis I (from glutamate);;
metacyc_pathway_type Heme-b-Biosynthesis; Super-Pathways;; Aminoacyl-tRNAs-Charging; Metabolic-Clusters;; Tetrapyrrole-Biosynthesis;;
pfam_acc PF00749;
pfam_desc tRNA synthetases class I (E and Q), catalytic domain;
pfam_id tRNA-synt_1c;
pfam_target db:Pfam-A.hmm|PF00749.21 evalue:4.6e-65 score:218.8 best_domain_score:218.5 name:tRNA-synt_1c;
sprot_desc Glutamate--tRNA ligase 1;
sprot_id sp|A1B0F1|SYE1_PARDP;
sprot_target db:uniprot_sprot|sp|A1B0F1|SYE1_PARDP 1 436 evalue:6.5e-129 qcov:97.30 identity:52.90;
tigrfam_acc TIGR00464;
tigrfam_desc glutamate--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name gltX_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00464 evalue:1.7e-91 score:306.6 best_domain_score:293.5 name:TIGR00464;
92326 90653 CDS
ID metaerg.pl|07239
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
92741 92475 CDS
ID metaerg.pl|07240
allec_ids 2.1.1.148;
allgo_ids GO:0006231; GO:0050660; GO:0050797; GO:0006235;
allko_ids K03465;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Limimaricola;s__Limimaricola pyoseonensis;
genomedb_acc GCF_900102015.1;
genomedb_target db:genomedb|GCF_900102015.1|WP_090111085.1 1 87 evalue:3.7e-21 qcov:98.90 identity:63.20;
kegg_pathway_id 00670; 00240;
kegg_pathway_name One carbon pool by folate; Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 13.9223; ; ; 13.9191; 0.00317519;
metacyc_pathway_id PWY-6545;
metacyc_pathway_name pyrimidine deoxyribonucleotides de novo biosynthesis III;;
metacyc_pathway_type Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;;
pfam_acc PF02511;
pfam_desc Thymidylate synthase complementing protein;
pfam_id Thy1;
pfam_target db:Pfam-A.hmm|PF02511.15 evalue:4.3e-06 score:25.9 best_domain_score:25.5 name:Thy1;
sprot_desc Flavin-dependent thymidylate synthase;
sprot_id sp|Q5LTY7|THYX_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LTY7|THYX_RUEPO 1 83 evalue:4.4e-21 qcov:94.30 identity:62.70;
>Feature NODE_47_length_92677_cov_15.1313
1704 88 CDS
ID metaerg.pl|07241
allec_ids 1.1.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0005886; GO:0050660; GO:0016614;
allko_ids K00108; K00120;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08003.1 1 531 evalue:1.6e-247 qcov:98.70 identity:77.60;
kegg_pathway_id 00361; 00260; 00632; 00624; 00903; 00626;
kegg_pathway_name gamma-Hexachlorocyclohexane degradation; Glycine, serine and threonine metabolism; Benzoate degradation via CoA ligation; 1- and 2-Methylnaphthalene degradation; Limonene and pinene degradation; Naphthalene and anthracene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id P421-PWY; PWY-6509; P221-PWY; 12DICHLORETHDEG-PWY;
metacyc_pathway_name 4-nitrotoluene degradation I;; methanol oxidation to formaldehyde III;; octane oxidation;; 1,2-dichloroethane degradation;;
metacyc_pathway_type 4-Nitrotoluene-Degradation;; Methanol-Oxidation;; Other-Degradation;; CHLORINATED-COMPOUNDS-DEG;;
pfam_acc PF01266; PF00890; PF05199; PF00732; PF05834;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; GMC oxidoreductase; GMC oxidoreductase; Lycopene cyclase protein;
pfam_id DAO; FAD_binding_2; GMC_oxred_C; GMC_oxred_N; Lycopene_cycl;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:6.9e-07 score:28.4 best_domain_score:24.7 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:3.4e-07 score:28.9 best_domain_score:26.4 name:FAD_binding_2; db:Pfam-A.hmm|PF05199.13 evalue:4e-40 score:136.9 best_domain_score:136.1 name:GMC_oxred_C; db:Pfam-A.hmm|PF00732.19 evalue:1.4e-86 score:289.8 best_domain_score:289.4 name:GMC_oxred_N; db:Pfam-A.hmm|PF05834.12 evalue:2.4e-06 score:26.1 best_domain_score:25.4 name:Lycopene_cycl;
sprot_desc Alcohol dehydrogenase [acceptor];
sprot_id sp|Q9WWW2|ALKJ_PSEPU;
sprot_target db:uniprot_sprot|sp|Q9WWW2|ALKJ_PSEPU 3 530 evalue:1.4e-130 qcov:98.10 identity:46.70;
3214 1853 CDS
ID metaerg.pl|07242
allgo_ids GO:0008519; GO:0015696; GO:0016020; GO:0016021; GO:0005886;
allko_ids K03320;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07448.1 1 453 evalue:4.3e-190 qcov:100.00 identity:75.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00909;
pfam_desc Ammonium Transporter Family;
pfam_id Ammonium_transp;
pfam_target db:Pfam-A.hmm|PF00909.21 evalue:1.9e-100 score:335.6 best_domain_score:334.2 name:Ammonium_transp;
sp YES;
sprot_desc Putative ammonium transporter sll0108;
sprot_id sp|P54147|Y108_SYNY3;
sprot_target db:uniprot_sprot|sp|P54147|Y108_SYNY3 50 450 evalue:7.1e-75 qcov:88.50 identity:44.50;
tigrfam_acc TIGR03644;
tigrfam_desc probable ammonium transporter, marine subtype;
tigrfam_name marine_trans_1;
tigrfam_target db:TIGRFAMs.hmm|TIGR03644 evalue:1.1e-187 score:623.0 best_domain_score:622.7 name:TIGR03644;
tm_num 12;
1853 1918 signal_peptide
ID metaerg.pl|07243
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
3214 1853 transmembrane_helix
ID metaerg.pl|07244
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i1991-2059o2117-2176i2195-2254o2297-2356i2375-2434o2477-2545i2579-2647o2705-2773i2798-2851o2864-2932i2957-3016o3044-3112i;
3582 3244 CDS
ID metaerg.pl|07245
allgo_ids GO:0006808; GO:0030234; GO:0000166; GO:0009399;
allko_ids K04752;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109532723.1 1 112 evalue:1.5e-48 qcov:100.00 identity:90.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00543;
pfam_desc Nitrogen regulatory protein P-II;
pfam_id P-II;
pfam_target db:Pfam-A.hmm|PF00543.22 evalue:1.8e-39 score:133.7 best_domain_score:133.5 name:P-II;
sprot_desc Nitrogen regulatory protein P-II;
sprot_id sp|O54053|GLNB_RHIEC;
sprot_target db:uniprot_sprot|sp|O54053|GLNB_RHIEC 1 112 evalue:6.1e-36 qcov:100.00 identity:61.60;
3994 6045 CDS
ID metaerg.pl|07246
allgo_ids GO:0008658;
allko_ids K03587; K12555; K05365; K05364; K08384; K05367; K08884; K04478; K05366; K08282;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07450.1 15 682 evalue:0.0e+00 qcov:97.80 identity:80.50;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00912; PF00905;
pfam_desc Transglycosylase; Penicillin binding protein transpeptidase domain;
pfam_id Transgly; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF00912.22 evalue:6.7e-50 score:168.2 best_domain_score:166.4 name:Transgly; db:Pfam-A.hmm|PF00905.22 evalue:1.6e-27 score:95.7 best_domain_score:94.6 name:Transpeptidase;
tm_num 1;
3994 6045 transmembrane_helix
ID metaerg.pl|07247
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i4054-4122o;
6524 6255 CDS
ID metaerg.pl|07248
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Primorskyibacter;s__Primorskyibacter insulae;
genomedb_acc GCF_900302505.1;
genomedb_target db:genomedb|GCF_900302505.1|WP_108886750.1 12 85 evalue:2.3e-23 qcov:83.10 identity:71.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF06945;
pfam_desc Protein of unknown function (DUF1289);
pfam_id DUF1289;
pfam_target db:Pfam-A.hmm|PF06945.13 evalue:8.5e-20 score:69.5 best_domain_score:69.1 name:DUF1289;
7100 6627 CDS
ID metaerg.pl|07249
allec_ids 3.1.-.-;
allgo_ids GO:0006364; GO:0005737; GO:0004518; GO:0000967;
allko_ids K07447;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Actibacterium;s__Actibacterium mucosum;
genomedb_acc GCF_000647975.1;
genomedb_target db:genomedb|GCF_000647975.1|WP_035259536.1 10 151 evalue:1.9e-60 qcov:90.40 identity:83.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF03652;
pfam_desc Holliday junction resolvase;
pfam_id RuvX;
pfam_target db:Pfam-A.hmm|PF03652.15 evalue:2.8e-40 score:137.0 best_domain_score:136.9 name:RuvX;
sprot_desc Putative pre-16S rRNA nuclease;
sprot_id sp|Q5LQY2|YQGF_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LQY2|YQGF_RUEPO 10 152 evalue:8.8e-57 qcov:91.10 identity:76.20;
tigrfam_acc TIGR00250;
tigrfam_desc putative transcription antitermination factor YqgF;
tigrfam_mainrole Unknown function;
tigrfam_name RNAse_H_YqgF;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00250 evalue:1.6e-31 score:108.2 best_domain_score:108.0 name:TIGR00250;
8386 7100 CDS
ID metaerg.pl|07250
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07889.1 1 424 evalue:1.6e-133 qcov:99.10 identity:61.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
tigrfam_acc TIGR03142;
tigrfam_desc cytochrome c-type biogenesis protein CcmI;
tigrfam_mainrole Energy metabolism;
tigrfam_name cytochro_ccmI;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR03142 evalue:2.7e-20 score:72.0 best_domain_score:70.6 name:TIGR03142;
tm_num 2;
8386 7100 transmembrane_helix
ID metaerg.pl|07251
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology o7109-7177i7418-7486o;
8635 9879 CDS
ID metaerg.pl|07252
allec_ids 1.5.3.1;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0008115; GO:0046653;
allko_ids K00303;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07890.1 1 414 evalue:1.4e-216 qcov:100.00 identity:89.90;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id PWY-3661; CRNFORCAT-PWY;
metacyc_pathway_name glycine betaine degradation I;; creatinine degradation I;;
metacyc_pathway_type Glycine-Betaine-Degradation;; Creatinine-Degradation;;
pfam_acc PF01266; PF13450; PF01946;
pfam_desc FAD dependent oxidoreductase; NAD(P)-binding Rossmann-like domain; Thi4 family;
pfam_id DAO; NAD_binding_8; Thi4;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:5.6e-59 score:199.7 best_domain_score:199.5 name:DAO; db:Pfam-A.hmm|PF13450.6 evalue:9.9e-06 score:24.9 best_domain_score:24.3 name:NAD_binding_8; db:Pfam-A.hmm|PF01946.17 evalue:1.8e-06 score:26.6 best_domain_score:25.7 name:Thi4;
sprot_desc Sarcosine oxidase subunit beta;
sprot_id sp|Q52671|SOXB_RHOCB;
sprot_target db:uniprot_sprot|sp|Q52671|SOXB_RHOCB 1 414 evalue:1.0e-192 qcov:100.00 identity:77.50;
tigrfam_acc TIGR01373;
tigrfam_desc sarcosine oxidase, beta subunit family;
tigrfam_mainrole Energy metabolism;
tigrfam_name soxB;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01373 evalue:2.7e-187 score:621.7 best_domain_score:621.6 name:TIGR01373;
10082 10279 CDS
ID metaerg.pl|07253
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
tm_num 1;
10082 10279 transmembrane_helix
ID metaerg.pl|07254
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i10142-10210o;
10442 10765 CDS
ID metaerg.pl|07255
allgo_ids GO:0008115; GO:0046653;
allko_ids K00304;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246624.1 1 107 evalue:1.2e-50 qcov:100.00 identity:83.20;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF04267;
pfam_desc Sarcosine oxidase, delta subunit family;
pfam_id SoxD;
pfam_target db:Pfam-A.hmm|PF04267.12 evalue:9.6e-28 score:95.4 best_domain_score:95.1 name:SoxD;
10762 13770 CDS
ID metaerg.pl|07256
allec_ids 1.5.3.1;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0008115; GO:0046653;
allko_ids K03388; K00605; K00314; K00302;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07894.1 1 1002 evalue:0.0e+00 qcov:100.00 identity:75.20;
kegg_pathway_id 00910; 00670; 00260; 00790;
kegg_pathway_name Nitrogen metabolism; One carbon pool by folate; Glycine, serine and threonine metabolism; Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id CRNFORCAT-PWY; PWY-3661;
metacyc_pathway_name creatinine degradation I;; glycine betaine degradation I;;
metacyc_pathway_type Creatinine-Degradation;; Glycine-Betaine-Degradation;;
pfam_acc PF00890; PF12831; PF13510; PF01571; PF08669; PF13450; PF07992; PF17806;
pfam_desc FAD binding domain; FAD dependent oxidoreductase; 2Fe-2S iron-sulfur cluster binding domain; Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Sarcosine oxidase A3 domain;
pfam_id FAD_binding_2; FAD_oxidored; Fer2_4; GCV_T; GCV_T_C; NAD_binding_8; Pyr_redox_2; SO_alpha_A3;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:2.2e-06 score:26.3 best_domain_score:25.6 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:1.9e-07 score:30.1 best_domain_score:29.4 name:FAD_oxidored; db:Pfam-A.hmm|PF13510.6 evalue:1.4e-23 score:81.9 best_domain_score:78.9 name:Fer2_4; db:Pfam-A.hmm|PF01571.21 evalue:1.2e-71 score:240.3 best_domain_score:239.9 name:GCV_T; db:Pfam-A.hmm|PF08669.11 evalue:3.7e-13 score:48.4 best_domain_score:46.8 name:GCV_T_C; db:Pfam-A.hmm|PF13450.6 evalue:1.8e-06 score:27.3 best_domain_score:26.9 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:3.4e-12 score:45.4 best_domain_score:44.8 name:Pyr_redox_2; db:Pfam-A.hmm|PF17806.1 evalue:1e-32 score:111.5 best_domain_score:109.8 name:SO_alpha_A3;
sprot_desc Sarcosine oxidase subunit alpha;
sprot_id sp|O87386|SOXA_RHIME;
sprot_target db:uniprot_sprot|sp|O87386|SOXA_RHIME 2 1002 evalue:7.5e-218 qcov:99.90 identity:44.60;
tigrfam_acc TIGR01372;
tigrfam_desc sarcosine oxidase, alpha subunit family;
tigrfam_mainrole Energy metabolism;
tigrfam_name soxA;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01372 evalue:0 score:1278.9 best_domain_score:1278.8 name:TIGR01372;
13763 14335 CDS
ID metaerg.pl|07257
allko_ids K00305;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH29510.1 1 188 evalue:3.9e-60 qcov:98.90 identity:66.00;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01571; PF04268;
pfam_desc Aminomethyltransferase folate-binding domain; Sarcosine oxidase, gamma subunit family;
pfam_id GCV_T; SoxG;
pfam_target db:Pfam-A.hmm|PF01571.21 evalue:1.2e-10 score:40.4 best_domain_score:39.9 name:GCV_T; db:Pfam-A.hmm|PF04268.12 evalue:1.3e-29 score:102.4 best_domain_score:102.2 name:SoxG;
17570 14841 CDS
ID metaerg.pl|07258
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109533843.1 38 798 evalue:2.2e-89 qcov:83.70 identity:36.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
sp YES;
tm_num 1;
14841 14978 signal_peptide
ID metaerg.pl|07259
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
17570 14841 transmembrane_helix
ID metaerg.pl|07260
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i14901-14969o;
18439 17570 CDS
ID metaerg.pl|07261
allgo_ids GO:0016021; GO:0005886; GO:0097588; GO:0052143; GO:0006811;
allko_ids K02556;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109533842.1 1 289 evalue:4.1e-130 qcov:100.00 identity:79.90;
kegg_pathway_id 02020; 02040;
kegg_pathway_name Two-component system - General; Flagellar assembly;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01618;
pfam_desc MotA/TolQ/ExbB proton channel family;
pfam_id MotA_ExbB;
pfam_target db:Pfam-A.hmm|PF01618.16 evalue:4.3e-12 score:45.1 best_domain_score:44.2 name:MotA_ExbB;
sprot_desc Motility protein A;
sprot_id sp|Q44456|MOTA_AGRFC;
sprot_target db:uniprot_sprot|sp|Q44456|MOTA_AGRFC 4 281 evalue:3.3e-41 qcov:96.20 identity:34.40;
tigrfam_acc TIGR03818;
tigrfam_desc flagellar motor stator protein MotA;
tigrfam_name MotA1;
tigrfam_target db:TIGRFAMs.hmm|TIGR03818 evalue:2.6e-106 score:354.0 best_domain_score:353.8 name:TIGR03818;
tm_num 4;
18439 17570 transmembrane_helix
ID metaerg.pl|07262
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i17573-17635o17648-17716i18086-18145o18173-18241i;
19239 18496 CDS
ID metaerg.pl|07263
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE49269.1 30 235 evalue:2.4e-30 qcov:83.40 identity:46.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF03448;
pfam_desc MgtE intracellular N domain;
pfam_id MgtE_N;
pfam_target db:Pfam-A.hmm|PF03448.17 evalue:8.8e-07 score:28.7 best_domain_score:24.9 name:MgtE_N;
tm_num 1;
19239 18496 transmembrane_helix
ID metaerg.pl|07264
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i18589-18657o;
19808 19236 CDS
ID metaerg.pl|07265
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
tm_num 1;
19808 19236 transmembrane_helix
ID metaerg.pl|07266
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology o19245-19304i;
20320 19817 CDS
ID metaerg.pl|07267
allgo_ids GO:0006935; GO:0009425; GO:0071973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH30581.1 6 167 evalue:9.4e-34 qcov:97.00 identity:54.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF03748;
pfam_desc Flagellar basal body-associated protein FliL;
pfam_id FliL;
pfam_target db:Pfam-A.hmm|PF03748.14 evalue:3.9e-10 score:39.5 best_domain_score:39.0 name:FliL;
tm_num 1;
20320 19817 transmembrane_helix
ID metaerg.pl|07268
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i19874-19942o;
20455 22071 CDS
ID metaerg.pl|07269
allgo_ids GO:0009431; GO:0016021; GO:0005886; GO:0003774; GO:0071973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE49272.1 1 538 evalue:6.5e-169 qcov:100.00 identity:63.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01514; PF08345;
pfam_desc Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal;
pfam_id YscJ_FliF; YscJ_FliF_C;
pfam_target db:Pfam-A.hmm|PF01514.17 evalue:5.8e-47 score:159.1 best_domain_score:158.0 name:YscJ_FliF; db:Pfam-A.hmm|PF08345.11 evalue:2.6e-33 score:114.7 best_domain_score:110.9 name:YscJ_FliF_C;
sprot_desc Flagellar M-ring protein;
sprot_id sp|Q04954|FLIF_CAUVC;
sprot_target db:uniprot_sprot|sp|Q04954|FLIF_CAUVC 24 533 evalue:2.7e-41 qcov:94.80 identity:30.20;
tigrfam_acc TIGR00206;
tigrfam_desc flagellar M-ring protein FliF;
tigrfam_mainrole Cellular processes;
tigrfam_name fliF;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR00206 evalue:1.9e-49 score:168.2 best_domain_score:167.5 name:TIGR00206;
tm_num 2;
20455 22071 transmembrane_helix
ID metaerg.pl|07270
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i20503-20571o21715-21783i;
22071 22682 CDS
ID metaerg.pl|07271
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE49273.1 1 189 evalue:1.6e-43 qcov:93.10 identity:51.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
22666 22983 CDS
ID metaerg.pl|07272
allgo_ids GO:0009425; GO:0005886; GO:0003774; GO:0071973; GO:0006935;
allko_ids K02417;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109533837.1 9 105 evalue:1.1e-29 qcov:92.40 identity:74.20;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01052;
pfam_desc Type III flagellar switch regulator (C-ring) FliN C-term;
pfam_id FliMN_C;
pfam_target db:Pfam-A.hmm|PF01052.20 evalue:3e-22 score:77.7 best_domain_score:77.4 name:FliMN_C;
sprot_desc Flagellar motor switch protein FliN;
sprot_id sp|Q03593|FLIN_CAUVC;
sprot_target db:uniprot_sprot|sp|Q03593|FLIN_CAUVC 4 99 evalue:4.3e-07 qcov:91.40 identity:35.40;
23105 23998 CDS
ID metaerg.pl|07273
allgo_ids GO:0009306; GO:0016020; GO:0009425; GO:0016021; GO:0005886; GO:0044781; GO:0009405;
allko_ids K02419;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109533836.1 46 297 evalue:7.6e-87 qcov:84.80 identity:70.50;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00813;
pfam_desc FliP family;
pfam_id FliP;
pfam_target db:Pfam-A.hmm|PF00813.20 evalue:1.5e-66 score:223.2 best_domain_score:222.8 name:FliP;
sprot_desc Flagellar biosynthetic protein FliP;
sprot_id sp|Q45980|FLIP_CAUVC;
sprot_target db:uniprot_sprot|sp|Q45980|FLIP_CAUVC 63 296 evalue:4.4e-49 qcov:78.80 identity:50.00;
tigrfam_acc TIGR01103;
tigrfam_desc flagellar biosynthetic protein FliP;
tigrfam_mainrole Cellular processes;
tigrfam_name fliP;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR01103 evalue:1.2e-65 score:220.1 best_domain_score:219.6 name:TIGR01103;
tm_num 5;
23105 23998 transmembrane_helix
ID metaerg.pl|07274
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i23267-23335o23393-23488i23525-23593o23807-23875i23912-23980o;
24872 24102 CDS
ID metaerg.pl|07275
allec_ids 2.1.1.-;
allgo_ids GO:0008168; GO:0005829; GO:0005634;
allko_ids K00568; K03183; K00599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudoroseicyclus;s__Pseudoroseicyclus aestuarii;
genomedb_acc GCF_003217255.1;
genomedb_target db:genomedb|GCF_003217255.1|WP_110814534.1 5 253 evalue:8.9e-76 qcov:97.30 identity:58.80;
kegg_pathway_id 00450; 00626; 00350; 00130; 00380; 00150; 00340;
kegg_pathway_name Selenoamino acid metabolism; Naphthalene and anthracene degradation; Tyrosine metabolism; Ubiquinone biosynthesis; Tryptophan metabolism; Androgen and estrogen metabolism; Histidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id PWY-6442; PWY-6575; CODH-PWY; PWY-5467; PWY-6477; PWY-3542; ALL-CHORISMATE-PWY; PWY-6153; PWY-5041; PWY-4021; PWY-5975; PWY-5864; PWY-1061; PWY-5876; PWY-1422; PWYG-321; PWY-5305; PWY-6113; PWY-5729; PWY-6303; PWY-5857; PWY-5855; PWY-5209; PWY-6151; PWY-5856; PWY-6142; PWY-6154; PWY-6424; UBISYN-PWY; METH-ACETATE-PWY; METHIONINE-DEG1-PWY; PWY-5328; PWY-5773; PWY-6519; CO2FORM-PWY; PWY-5116; PWY-1581; PWY-5479; PWY-5987; PWY-6292; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6146; PWY-6395; PWY-6427;
metacyc_pathway_name spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; gramine biosynthesis;; gibberellin inactivation II (methylation);; choline biosynthesis II;; superpathway of chorismate metabolism;; autoinducer AI-2 biosynthesis I;; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; vitamin E biosynthesis (tocopherols);; mycolate biosynthesis;; bixin biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; ubiquinol-9 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; autoinducer AI-2 biosynthesis II (Vibrio);; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; methanogenesis from acetate;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; xanthohumol biosynthesis;; biotin biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of seleno-compound metabolism;; rot-2'-enonate biosynthesis;;
metacyc_pathway_type N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Autotrophic-CO2-Fixation;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Choline-Biosynthesis;; Super-Pathways;; Autoinducer-Biosynthesis;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; Fatty-acid-biosynthesis;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Autoinducer-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;; METHANOGENESIS;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; LIGNAN-SYN;; QUINONE-SYN;; CYSTEINE-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Rotenoids-Biosynthesis;;
pfam_acc PF08241; PF08242; PF13489; PF13649; PF13847; PF07021; PF05175; PF01135; PF00398; PF01209;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methionine biosynthesis protein MetW; Methyltransferase small domain; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Ribosomal RNA adenine dimethylase; ubiE/COQ5 methyltransferase family;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; MetW; MTS; PCMT; RrnaAD; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:1.2e-20 score:73.2 best_domain_score:72.6 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.2e-13 score:50.9 best_domain_score:49.6 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:6.5e-16 score:57.8 best_domain_score:57.4 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:2.5e-17 score:62.6 best_domain_score:62.0 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:8.6e-14 score:50.8 best_domain_score:50.4 name:Methyltransf_31; db:Pfam-A.hmm|PF07021.12 evalue:5e-11 score:41.8 best_domain_score:41.4 name:MetW; db:Pfam-A.hmm|PF05175.14 evalue:3.8e-08 score:32.3 best_domain_score:31.1 name:MTS; db:Pfam-A.hmm|PF01135.19 evalue:1.4e-05 score:24.2 best_domain_score:23.2 name:PCMT; db:Pfam-A.hmm|PF00398.20 evalue:3.5e-06 score:25.5 best_domain_score:25.1 name:RrnaAD; db:Pfam-A.hmm|PF01209.18 evalue:2.9e-05 score:22.7 best_domain_score:21.5 name:Ubie_methyltran;
sprot_desc Uncharacterized methyltransferase C70.08c;
sprot_id sp|O74529|YJ48_SCHPO;
sprot_target db:uniprot_sprot|sp|O74529|YJ48_SCHPO 11 252 evalue:2.1e-31 qcov:94.50 identity:37.30;
24945 25838 CDS
ID metaerg.pl|07276
allec_ids 3.4.24.-;
allgo_ids GO:0004222; GO:0006508; GO:0016021; GO:0005886; GO:0008270;
allko_ids K03799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05780.1 2 296 evalue:1.7e-123 qcov:99.30 identity:80.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:1.3e-43 score:148.3 best_domain_score:148.3 name:Peptidase_M48;
sprot_desc Protease HtpX homolog;
sprot_id sp|A4WRW9|HTPX_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WRW9|HTPX_RHOS5 1 296 evalue:5.1e-98 qcov:99.70 identity:64.90;
tm_num 3;
24945 25838 transmembrane_helix
ID metaerg.pl|07277
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i24990-25058o25365-25433i25452-25520o;
25947 26963 CDS
ID metaerg.pl|07278
allgo_ids GO:0015099; GO:0016021; GO:0035444; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Salinihabitans;s__Salinihabitans flavidus;
genomedb_acc GCF_900110425.1;
genomedb_target db:genomedb|GCF_900110425.1|WP_093119973.1 36 327 evalue:3.7e-45 qcov:86.40 identity:45.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF03824;
pfam_desc High-affinity nickel-transport protein;
pfam_id NicO;
pfam_target db:Pfam-A.hmm|PF03824.16 evalue:1.9e-20 score:72.6 best_domain_score:71.7 name:NicO;
sp YES;
tm_num 7;
25947 26018 signal_peptide
ID metaerg.pl|07279
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
25947 26963 transmembrane_helix
ID metaerg.pl|07280
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i25959-26027o26142-26210i26271-26339o26382-26450i26658-26726o26754-26822i26880-26948o;
27093 28511 CDS
ID metaerg.pl|07281
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0042910; GO:0006811;
allko_ids K03327;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06312.1 8 455 evalue:4.9e-189 qcov:94.90 identity:77.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01554;
pfam_desc MatE;
pfam_id MatE;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:3.1e-52 score:175.7 best_domain_score:105.0 name:MatE;
sprot_desc Probable multidrug resistance protein NorM;
sprot_id sp|Q8UDF5|NORM_AGRFC;
sprot_target db:uniprot_sprot|sp|Q8UDF5|NORM_AGRFC 8 451 evalue:6.9e-89 qcov:94.10 identity:43.00;
tigrfam_acc TIGR00797;
tigrfam_desc MATE efflux family protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name matE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00797 evalue:5.3e-69 score:232.2 best_domain_score:231.8 name:TIGR00797;
tm_num 12;
27093 28511 transmembrane_helix
ID metaerg.pl|07282
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i27153-27212o27255-27323i27399-27467o27510-27578i27597-27665o27708-27776i27834-27902o27930-27998i28059-28127o28170-28238i28299-28367o28380-28448i;
28524 28598 tRNA
ID metaerg.pl|07283
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
name tRNA_Lys_ttt;
28891 29649 CDS
ID metaerg.pl|07284
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sp000518925;
genomedb_acc GCF_000518925.1;
genomedb_target db:genomedb|GCF_000518925.1|WP_036697119.1 1 252 evalue:5.4e-102 qcov:100.00 identity:66.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
29973 30782 CDS
ID metaerg.pl|07285
allgo_ids GO:0003677; GO:0006310; GO:0015074;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius azorensis;
genomedb_acc GCF_900109455.1;
genomedb_target db:genomedb|GCF_900109455.1|WP_093032846.1 1 268 evalue:7.8e-123 qcov:99.60 identity:61.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF13356; PF00589;
pfam_desc Arm DNA-binding domain; Phage integrase family;
pfam_id Arm-DNA-bind_3; Phage_integrase;
pfam_target db:Pfam-A.hmm|PF13356.6 evalue:2.2e-07 score:30.4 best_domain_score:28.3 name:Arm-DNA-bind_3; db:Pfam-A.hmm|PF00589.22 evalue:7.7e-12 score:44.6 best_domain_score:44.0 name:Phage_integrase;
30779 31531 CDS
ID metaerg.pl|07286
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
32706 32326 CDS
ID metaerg.pl|07287
allgo_ids GO:0003677; GO:0004803; GO:0006313; GO:0006310; GO:0032196;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseivivax_B;s__Roseivivax_B pacificus;
genomedb_acc GCF_003054175.1;
genomedb_target db:genomedb|GCF_003054175.1|WP_107979009.1 1 117 evalue:5.2e-45 qcov:92.90 identity:79.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01609; PF13737;
pfam_desc domain; domain;
pfam_id DDE_Tnp_1; DDE_Tnp_1_5;
pfam_target db:Pfam-A.hmm|PF01609.21 evalue:1.1e-07 score:31.0 best_domain_score:30.7 name:DDE_Tnp_1; db:Pfam-A.hmm|PF13737.6 evalue:4.3e-19 score:68.1 best_domain_score:67.6 name:DDE_Tnp_1_5;
sprot_desc Probable transposase for transposon Tn903;
sprot_id sp|P03009|TRA2_ECOLX;
sprot_target db:uniprot_sprot|sp|P03009|TRA2_ECOLX 1 112 evalue:2.1e-16 qcov:88.90 identity:36.60;
33362 33276 tRNA
ID metaerg.pl|07288
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
name tRNA_Ser_cag;
33571 34560 CDS
ID metaerg.pl|07289
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0005759; GO:0005747; GO:0005654; GO:0050662; GO:0003954; GO:0044877; GO:0007623; GO:0032981; GO:1901006;
allko_ids K00356; K00329; K03953;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06273.1 1 326 evalue:2.8e-130 qcov:99.10 identity:74.50;
kegg_pathway_id 00130; 05012; 00190;
kegg_pathway_name Ubiquinone biosynthesis; Parkinson's disease; Oxidative phosphorylation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01073; PF01370; PF13460; PF07993; PF05368; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; NAD(P)H-binding ; Male sterility protein; NmrA-like family; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; NAD_binding_10; NAD_binding_4; NmrA; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:7.1e-13 score:47.4 best_domain_score:30.4 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:6.1e-14 score:51.3 best_domain_score:49.3 name:Epimerase; db:Pfam-A.hmm|PF13460.6 evalue:7.3e-15 score:54.6 best_domain_score:54.0 name:NAD_binding_10; db:Pfam-A.hmm|PF07993.12 evalue:1.2e-05 score:23.8 best_domain_score:18.1 name:NAD_binding_4; db:Pfam-A.hmm|PF05368.13 evalue:5.2e-07 score:28.7 best_domain_score:28.1 name:NmrA; db:Pfam-A.hmm|PF04321.17 evalue:2.7e-14 score:52.2 best_domain_score:46.8 name:RmlD_sub_bind;
sprot_desc NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial;
sprot_id sp|Q0MQB4|NDUA9_PANTR;
sprot_target db:uniprot_sprot|sp|Q0MQB4|NDUA9_PANTR 4 329 evalue:1.2e-28 qcov:99.10 identity:29.80;
tm_num 1;
33571 34560 transmembrane_helix
ID metaerg.pl|07290
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology o34291-34359i;
35372 34563 CDS
ID metaerg.pl|07291
allec_ids 3.6.1.27;
allgo_ids GO:0016020; GO:0016311; GO:0050380; GO:0016021; GO:0005886; GO:0071555; GO:0009252; GO:0008360; GO:0046677;
allko_ids K06153;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06272.1 1 269 evalue:3.8e-85 qcov:100.00 identity:64.70;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF02673;
pfam_desc Bacitracin resistance protein BacA;
pfam_id BacA;
pfam_target db:Pfam-A.hmm|PF02673.18 evalue:7.4e-71 score:238.1 best_domain_score:237.9 name:BacA;
sprot_desc Undecaprenyl-diphosphatase;
sprot_id sp|A8LQR9|UPPP_DINSH;
sprot_target db:uniprot_sprot|sp|A8LQR9|UPPP_DINSH 1 268 evalue:5.0e-68 qcov:99.60 identity:54.50;
tm_num 7;
35372 34563 transmembrane_helix
ID metaerg.pl|07292
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i34581-34649o34686-34754i34812-34880o34908-34976i35115-35183o35211-35279i35298-35366o;
35581 37017 CDS
ID metaerg.pl|07293
allec_ids 1.4.1.13;
allgo_ids GO:0051287; GO:0055114; GO:0051539; GO:0004355; GO:0046872; GO:0097054;
allko_ids K03388; K00384; K00264; K00266; K00123;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06271.1 1 478 evalue:7.9e-235 qcov:100.00 identity:82.30;
kegg_pathway_id 00680; 00790; 00240; 00630; 00910; 00251;
kegg_pathway_name Methane metabolism; Folate biosynthesis; Pyrimidine metabolism; Glyoxylate and dicarboxylate metabolism; Nitrogen metabolism; Glutamate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id GLUTAMINEFUM-PWY; GLUTSYN-PWY; AMMASSIM-PWY; PWY-5505;
metacyc_pathway_name L-glutamine degradation II;; L-glutamate biosynthesis I;; ammonia assimilation cycle III;; L-glutamate and L-glutamine biosynthesis;;
metacyc_pathway_type GLUTAMINE-DEG;; GLUTAMATE-SYN;; Ammonia-Assimilation; Super-Pathways;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;;
pfam_acc PF02826; PF01262; PF01593; PF01494; PF14691; PF13241; PF13450; PF00070; PF07992; PF13738;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; Alanine dehydrogenase/PNT, C-terminal domain; Flavin containing amine oxidoreductase; FAD binding domain; Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; Putative NAD(P)-binding; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id 2-Hacid_dh_C; AlaDh_PNT_C; Amino_oxidase; FAD_binding_3; Fer4_20; NAD_binding_7; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:2.3e-06 score:26.3 best_domain_score:23.1 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF01262.21 evalue:1.5e-05 score:23.6 best_domain_score:12.2 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF01593.24 evalue:6.5e-05 score:21.6 best_domain_score:19.3 name:Amino_oxidase; db:Pfam-A.hmm|PF01494.19 evalue:2.1e-06 score:26.5 best_domain_score:24.9 name:FAD_binding_3; db:Pfam-A.hmm|PF14691.6 evalue:9e-38 score:127.8 best_domain_score:127.2 name:Fer4_20; db:Pfam-A.hmm|PF13241.6 evalue:4.7e-06 score:26.2 best_domain_score:16.5 name:NAD_binding_7; db:Pfam-A.hmm|PF13450.6 evalue:1.1e-10 score:40.8 best_domain_score:38.6 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:1e-10 score:41.3 best_domain_score:20.9 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:6.4e-30 score:103.6 best_domain_score:103.0 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:4.3e-08 score:32.0 best_domain_score:16.5 name:Pyr_redox_3;
sprot_desc Glutamate synthase [NADPH] small chain;
sprot_id sp|Q05756|GLTD_AZOBR;
sprot_target db:uniprot_sprot|sp|Q05756|GLTD_AZOBR 1 478 evalue:3.6e-178 qcov:100.00 identity:62.90;
tigrfam_acc TIGR01318;
tigrfam_desc glutamate synthase, small subunit;
tigrfam_name gltD_gamma_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01318 evalue:8.4e-160 score:531.5 best_domain_score:531.3 name:TIGR01318;
37139 41668 CDS
ID metaerg.pl|07294
allec_ids 1.4.1.13;
allgo_ids GO:0006537; GO:0015930; GO:0016638; GO:0055114; GO:0051538; GO:0004355; GO:0046872; GO:0006541; GO:0097054;
allko_ids K00284; K00265; K00264; K00202;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06270.1 2 1509 evalue:0.0e+00 qcov:99.90 identity:86.20;
kegg_pathway_id 00790; 00910; 00251;
kegg_pathway_name Folate biosynthesis; Nitrogen metabolism; Glutamate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id GLUTAMINEFUM-PWY; PWY-5505; GLUTSYN-PWY; AMMASSIM-PWY;
metacyc_pathway_name L-glutamine degradation II;; L-glutamate and L-glutamine biosynthesis;; L-glutamate biosynthesis I;; ammonia assimilation cycle III;;
metacyc_pathway_type GLUTAMINE-DEG;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;; GLUTAMATE-SYN;; Ammonia-Assimilation; Super-Pathways;;
pfam_acc PF00310; PF01645; PF04898; PF01493;
pfam_desc Glutamine amidotransferases class-II; Conserved region in glutamate synthase; Glutamate synthase central domain; GXGXG motif;
pfam_id GATase_2; Glu_synthase; Glu_syn_central; GXGXG;
pfam_target db:Pfam-A.hmm|PF00310.21 evalue:1.1e-159 score:531.0 best_domain_score:530.6 name:GATase_2; db:Pfam-A.hmm|PF01645.17 evalue:6.5e-153 score:508.4 best_domain_score:506.4 name:Glu_synthase; db:Pfam-A.hmm|PF04898.14 evalue:2e-93 score:312.2 best_domain_score:311.1 name:Glu_syn_central; db:Pfam-A.hmm|PF01493.19 evalue:1.4e-72 score:242.6 best_domain_score:241.6 name:GXGXG;
sprot_desc Glutamate synthase [NADPH] large chain;
sprot_id sp|Q05755|GLTB_AZOBR;
sprot_target db:uniprot_sprot|sp|Q05755|GLTB_AZOBR 4 1509 evalue:0.0e+00 qcov:99.80 identity:66.70;
43256 42024 CDS
ID metaerg.pl|07295
allgo_ids GO:0005198; GO:0009428; GO:0030288; GO:0071973;
allko_ids K02394;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068300465.1 49 409 evalue:2.4e-160 qcov:88.00 identity:84.20;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF02119;
pfam_desc Flagellar P-ring protein;
pfam_id FlgI;
pfam_target db:Pfam-A.hmm|PF02119.16 evalue:6e-128 score:425.8 best_domain_score:425.6 name:FlgI;
sprot_desc Flagellar P-ring protein;
sprot_id sp|Q5LWZ2|FLGI_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LWZ2|FLGI_RUEPO 46 410 evalue:8.3e-139 qcov:89.00 identity:72.70;
tm_num 1;
43256 42024 transmembrane_helix
ID metaerg.pl|07296
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i42147-42215o;
44263 43253 CDS
ID metaerg.pl|07297
allgo_ids GO:0005198; GO:0071973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05797.1 10 336 evalue:3.8e-50 qcov:97.30 identity:42.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00700;
pfam_desc Bacterial flagellin C-terminal helical region;
pfam_id Flagellin_C;
pfam_target db:Pfam-A.hmm|PF00700.21 evalue:7.8e-08 score:31.8 best_domain_score:31.8 name:Flagellin_C;
45707 44265 CDS
ID metaerg.pl|07298
allgo_ids GO:0071973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05796.1 1 480 evalue:8.8e-101 qcov:100.00 identity:45.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF06429; PF00460;
pfam_desc Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein;
pfam_id Flg_bbr_C; Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF06429.13 evalue:1.1e-05 score:24.7 best_domain_score:22.2 name:Flg_bbr_C; db:Pfam-A.hmm|PF00460.20 evalue:3.7e-05 score:22.8 best_domain_score:22.8 name:Flg_bb_rod;
tigrfam_acc TIGR02492;
tigrfam_desc flagellar hook-associated protein FlgK;
tigrfam_mainrole Cellular processes;
tigrfam_name flgK_ends;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR02492 evalue:1.1e-59 score:202.1 best_domain_score:199.5 name:TIGR02492;
47120 45804 CDS
ID metaerg.pl|07299
allgo_ids GO:0071973; GO:0009425;
allko_ids K02390;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068300459.1 1 438 evalue:2.4e-158 qcov:100.00 identity:65.10;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF06429; PF00460;
pfam_desc Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein;
pfam_id Flg_bbr_C; Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF06429.13 evalue:2.8e-18 score:65.0 best_domain_score:63.7 name:Flg_bbr_C; db:Pfam-A.hmm|PF00460.20 evalue:2.1e-07 score:30.0 best_domain_score:28.6 name:Flg_bb_rod;
sprot_desc Flagellar hook protein FlgE;
sprot_id sp|Q8FUS9|FLGE_BRUSU;
sprot_target db:uniprot_sprot|sp|Q8FUS9|FLGE_BRUSU 3 438 evalue:9.1e-43 qcov:99.50 identity:33.30;
tigrfam_acc TIGR03506;
tigrfam_desc flagellar hook-basal body protein;
tigrfam_name FlgEFG_subfam;
tigrfam_target db:TIGRFAMs.hmm|TIGR03506 evalue:1.6e-73 score:247.6 best_domain_score:247.3 name:TIGR03506;
48064 47231 CDS
ID metaerg.pl|07300
allgo_ids GO:0016021; GO:0005886; GO:0097588; GO:0006935;
allko_ids K02557;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109534372.1 11 274 evalue:3.1e-90 qcov:95.30 identity:65.20;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF13677; PF00691;
pfam_desc Membrane MotB of proton-channel complex MotA/MotB ; OmpA family;
pfam_id MotB_plug; OmpA;
pfam_target db:Pfam-A.hmm|PF13677.6 evalue:5.2e-18 score:63.6 best_domain_score:62.7 name:MotB_plug; db:Pfam-A.hmm|PF00691.20 evalue:4.1e-08 score:32.7 best_domain_score:31.1 name:OmpA;
sprot_desc Motility protein B;
sprot_id sp|P0AF07|MOTB_ECO57;
sprot_target db:uniprot_sprot|sp|P0AF07|MOTB_ECO57 14 273 evalue:5.8e-27 qcov:93.90 identity:32.50;
tm_num 1;
48064 47231 transmembrane_helix
ID metaerg.pl|07301
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology o47348-47416i;
50009 48102 CDS
ID metaerg.pl|07302
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0032300; GO:0016887;
allko_ids K07642; K08282; K07641; K07646; K07654; K03407; K06379; K04757; K01768; K02668; K07636; K07653; K03572;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07298.1 7 635 evalue:6.8e-234 qcov:99.10 identity:70.50;
kegg_pathway_id 00230; 03090; 02020; 03430;
kegg_pathway_name Purine metabolism; Type II secretion system; Two-component system - General; Mismatch repair;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01119; PF13589; PF08676;
pfam_desc DNA mismatch repair protein, C-terminal domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain;
pfam_id DNA_mis_repair; HATPase_c_3; MutL_C;
pfam_target db:Pfam-A.hmm|PF01119.19 evalue:1.8e-33 score:114.0 best_domain_score:113.4 name:DNA_mis_repair; db:Pfam-A.hmm|PF13589.6 evalue:4.5e-11 score:42.0 best_domain_score:40.8 name:HATPase_c_3; db:Pfam-A.hmm|PF08676.11 evalue:1e-46 score:157.6 best_domain_score:156.8 name:MutL_C;
sprot_desc DNA mismatch repair protein MutL;
sprot_id sp|P0CAV5|MUTL_CAUVC;
sprot_target db:uniprot_sprot|sp|P0CAV5|MUTL_CAUVC 23 635 evalue:1.8e-172 qcov:96.50 identity:55.40;
tigrfam_acc TIGR00585;
tigrfam_desc DNA mismatch repair protein MutL;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutl;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00585 evalue:7.2e-85 score:284.6 best_domain_score:284.2 name:TIGR00585;
50704 50039 CDS
ID metaerg.pl|07303
allgo_ids GO:0003677; GO:0046872;
allko_ids K07167;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07296.1 1 221 evalue:3.9e-80 qcov:100.00 identity:71.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF12973;
pfam_desc ChrR Cupin-like domain;
pfam_id Cupin_7;
pfam_target db:Pfam-A.hmm|PF12973.7 evalue:3.1e-13 score:48.7 best_domain_score:48.2 name:Cupin_7;
sprot_desc Anti-sigma-E factor ChrR;
sprot_id sp|P40685|CHRR_RHOS4;
sprot_target db:uniprot_sprot|sp|P40685|CHRR_RHOS4 2 221 evalue:2.5e-65 qcov:99.50 identity:59.50;
tigrfam_acc TIGR02451;
tigrfam_desc anti-sigma factor, putative, ChrR family;
tigrfam_mainrole Regulatory functions;
tigrfam_name anti_sig_ChrR;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02451 evalue:1.8e-64 score:216.7 best_domain_score:216.5 name:TIGR02451;
51378 50716 CDS
ID metaerg.pl|07304
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0003677; GO:0016987;
allko_ids K03088;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07295.1 1 220 evalue:1.6e-73 qcov:100.00 identity:64.90;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF04542; PF04545; PF08281;
pfam_desc Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF04542.14 evalue:5.6e-15 score:54.1 best_domain_score:53.3 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:2.4e-14 score:51.8 best_domain_score:51.0 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:3.3e-14 score:51.5 best_domain_score:50.9 name:Sigma70_r4_2;
sprot_desc ECF RNA polymerase sigma factor RpoE;
sprot_id sp|Q3IYV6|RPOE_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IYV6|RPOE_RHOS4 46 220 evalue:1.8e-60 qcov:79.50 identity:65.70;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:6.9e-25 score:86.7 best_domain_score:86.4 name:TIGR02937;
51506 52801 CDS
ID metaerg.pl|07305
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07294.1 1 431 evalue:1.5e-192 qcov:100.00 identity:76.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01593; PF01266; PF03486; PF13450;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; HI0933-like protein; NAD(P)-binding Rossmann-like domain;
pfam_id Amino_oxidase; DAO; HI0933_like; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:6e-22 score:77.8 best_domain_score:77.2 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:1.5e-10 score:40.4 best_domain_score:24.6 name:DAO; db:Pfam-A.hmm|PF03486.14 evalue:5.2e-07 score:27.9 best_domain_score:14.5 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:4e-17 score:61.4 best_domain_score:59.7 name:NAD_binding_8;
sp YES;
tm_num 1;
51506 51625 signal_peptide
ID metaerg.pl|07306
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
51506 52801 transmembrane_helix
ID metaerg.pl|07307
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i51542-51610o;
52798 53571 CDS
ID metaerg.pl|07308
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07293.1 1 257 evalue:1.5e-107 qcov:100.00 identity:72.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF07103;
pfam_desc Protein of unknown function (DUF1365);
pfam_id DUF1365;
pfam_target db:Pfam-A.hmm|PF07103.11 evalue:1.4e-62 score:210.7 best_domain_score:210.5 name:DUF1365;
53568 54836 CDS
ID metaerg.pl|07309
allko_ids K08219;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07292.1 4 421 evalue:7.8e-170 qcov:99.10 identity:78.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF13347;
pfam_desc MFS/sugar transport protein;
pfam_id MFS_2;
pfam_target db:Pfam-A.hmm|PF13347.6 evalue:9.4e-49 score:165.3 best_domain_score:165.0 name:MFS_2;
tm_num 12;
53568 54836 transmembrane_helix
ID metaerg.pl|07310
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i53604-53663o53691-53744i53805-53864o53892-53960i54021-54080o54093-54146i54240-54308o54336-54404i54423-54491o54501-54569i54615-54683o54726-54794i;
54829 55389 CDS
ID metaerg.pl|07311
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109531482.1 14 185 evalue:7.4e-72 qcov:92.50 identity:76.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF12915;
pfam_desc Protein of unknown function (DUF3833);
pfam_id DUF3833;
pfam_target db:Pfam-A.hmm|PF12915.7 evalue:1.5e-52 score:176.7 best_domain_score:176.5 name:DUF3833;
sp YES;
tm_num 1;
54829 54912 signal_peptide
ID metaerg.pl|07312
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
54829 55389 transmembrane_helix
ID metaerg.pl|07313
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology o54841-54909i;
55406 56146 CDS
ID metaerg.pl|07314
allec_ids 1.-.-.-;
allgo_ids GO:0003824; GO:0050662; GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07290.1 1 245 evalue:2.6e-101 qcov:99.60 identity:75.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id PWY-5479; PWY-5987; PWY-5469; PWYG-321; PWY-6113; PWY-5271; PWY-4302; PWY-5826; PWY-2821;
metacyc_pathway_name 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; sesamin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;;
metacyc_pathway_type LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;;
pfam_acc PF00106; PF13561; PF01370; PF08659; PF13460;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain; NAD(P)H-binding;
pfam_id adh_short; adh_short_C2; Epimerase; KR; NAD_binding_10;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:5e-44 score:149.3 best_domain_score:149.1 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.1e-31 score:108.5 best_domain_score:108.2 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:4.4e-05 score:22.3 best_domain_score:21.6 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:4.4e-11 score:42.3 best_domain_score:41.8 name:KR; db:Pfam-A.hmm|PF13460.6 evalue:8e-09 score:34.9 best_domain_score:34.5 name:NAD_binding_10;
sprot_desc Uncharacterized oxidoreductase MXAN_5909;
sprot_id sp|P25970|Y5909_MYXXD;
sprot_target db:uniprot_sprot|sp|P25970|Y5909_MYXXD 1 238 evalue:1.6e-33 qcov:96.70 identity:39.30;
56301 56624 CDS
ID metaerg.pl|07315
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109531484.1 1 107 evalue:2.4e-38 qcov:100.00 identity:78.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF12616;
pfam_desc Protein of unknown function (DUF3775);
pfam_id DUF3775;
pfam_target db:Pfam-A.hmm|PF12616.8 evalue:2.4e-27 score:94.0 best_domain_score:93.7 name:DUF3775;
56852 57901 CDS
ID metaerg.pl|07316
allko_ids K02040;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_083204424.1 21 348 evalue:3.1e-103 qcov:94.00 identity:61.40;
kegg_pathway_id 02010; 02020;
kegg_pathway_name ABC transporters - General; Two-component system - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00691;
pfam_desc OmpA family;
pfam_id OmpA;
pfam_target db:Pfam-A.hmm|PF00691.20 evalue:1.3e-16 score:60.0 best_domain_score:59.0 name:OmpA;
sp YES;
tm_num 1;
56852 56947 signal_peptide
ID metaerg.pl|07317
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
56852 57901 transmembrane_helix
ID metaerg.pl|07318
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i56870-56938o;
58001 59191 CDS
ID metaerg.pl|07319
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005618; GO:0050660;
allko_ids K00253; K00248; K06446; K14448; K00249; K11731; K08098;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Maritimibacter;s__Maritimibacter alkaliphilus;
genomedb_acc GCF_000152805.1;
genomedb_target db:genomedb|GCF_000152805.1|WP_008334010.1 1 394 evalue:7.1e-157 qcov:99.50 identity:69.50;
kegg_pathway_id 00930; 00071; 00410; 00640; 00650; 01031; 00280;
kegg_pathway_name Caprolactam degradation; Fatty acid metabolism; beta-Alanine metabolism; Propanoate metabolism; Butanoate metabolism; Glycan structures - biosynthesis 2; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id CARNMET-PWY; PWY-6544; PWY-699; PWY-2582;
metacyc_pathway_name L-carnitine degradation I;; superpathway of C28 brassinosteroid biosynthesis;; brassinosteroid biosynthesis I;; brassinosteroid biosynthesis II;;
metacyc_pathway_type CARN-DEG;; Super-Pathways;; Brassinosteroid-Biosynthesis;; Brassinosteroid-Biosynthesis;;
pfam_acc PF00441; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:7e-25 score:87.2 best_domain_score:86.7 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF02770.19 evalue:1.9e-21 score:75.3 best_domain_score:74.5 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:8.8e-22 score:77.1 best_domain_score:73.7 name:Acyl-CoA_dh_N;
sprot_desc Putative acyl-CoA dehydrogenase FadE17;
sprot_id sp|P95280|ACD17_MYCTU;
sprot_target db:uniprot_sprot|sp|P95280|ACD17_MYCTU 1 395 evalue:2.8e-59 qcov:99.70 identity:35.70;
59195 60268 CDS
ID metaerg.pl|07320
allgo_ids GO:0016627; GO:0055114;
allko_ids K00253; K00248; K14448; K00249; K11731;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Defluviimonas_A;s__Defluviimonas_A indica;
genomedb_acc GCF_900106675.1;
genomedb_target db:genomedb|GCF_900106675.1|WP_035838274.1 1 356 evalue:3.3e-105 qcov:99.70 identity:60.10;
kegg_pathway_id 00280; 00650; 00640; 00071; 00410;
kegg_pathway_name Valine, leucine and isoleucine degradation; Butanoate metabolism; Propanoate metabolism; Fatty acid metabolism; beta-Alanine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00441; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:3.2e-22 score:78.6 best_domain_score:78.6 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF02770.19 evalue:2.3e-09 score:36.6 best_domain_score:35.5 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:6.4e-07 score:29.3 best_domain_score:28.2 name:Acyl-CoA_dh_N;
61824 60364 CDS
ID metaerg.pl|07321
allec_ids 6.3.1.18;
allgo_ids GO:0004356; GO:0006807; GO:0016880; GO:0005524; GO:0006542;
allko_ids K01915; K20419;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Amorphaceae;g__Amorphus;s__Amorphus coralli;
genomedb_acc GCF_000374525.1;
genomedb_target db:genomedb|GCF_000374525.1|WP_018698441.1 9 486 evalue:4.5e-177 qcov:98.40 identity:63.30;
kegg_pathway_id 02020; 00910; 00550; 00251;
kegg_pathway_name Two-component system - General; Nitrogen metabolism; Peptidoglycan biosynthesis; Glutamate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00120;
pfam_desc Glutamine synthetase, catalytic domain;
pfam_id Gln-synt_C;
pfam_target db:Pfam-A.hmm|PF00120.24 evalue:1.3e-79 score:266.9 best_domain_score:266.6 name:Gln-synt_C;
sprot_desc Gamma-glutamylanilide synthase;
sprot_id sp|Q44249|ATDA1_ACISP;
sprot_target db:uniprot_sprot|sp|Q44249|ATDA1_ACISP 14 485 evalue:2.7e-88 qcov:97.10 identity:37.20;
63171 61849 CDS
ID metaerg.pl|07322
allec_ids 1.14.12.7;
allgo_ids GO:0016491; GO:0051537; GO:0055114; GO:0005506; GO:0018620; GO:0046239;
allko_ids K00517; K18068;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Amorphaceae;g__Acuticoccus;s__Acuticoccus sp003258595;
genomedb_acc GCF_003258595.1;
genomedb_target db:genomedb|GCF_003258595.1|WP_111351763.1 1 440 evalue:4.6e-213 qcov:100.00 identity:77.40;
kegg_pathway_id 00361; 00940; 00903; 00626;
kegg_pathway_name gamma-Hexachlorocyclohexane degradation; Phenylpropanoid biosynthesis; Limonene and pinene degradation; Naphthalene and anthracene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id PWY5F9-3233;
metacyc_pathway_name phthalate degradation (aerobic);;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;;
pfam_acc PF11723; PF00355;
pfam_desc Homotrimeric ring hydroxylase; Rieske [2Fe-2S] domain;
pfam_id Aromatic_hydrox; Rieske;
pfam_target db:Pfam-A.hmm|PF11723.8 evalue:1.3e-05 score:24.1 best_domain_score:13.4 name:Aromatic_hydrox; db:Pfam-A.hmm|PF00355.26 evalue:8.4e-17 score:60.1 best_domain_score:59.4 name:Rieske;
sprot_desc Phthalate 4,5-dioxygenase oxygenase subunit;
sprot_id sp|Q05183|PHT3_PSEPU;
sprot_target db:uniprot_sprot|sp|Q05183|PHT3_PSEPU 1 394 evalue:3.6e-55 qcov:89.50 identity:33.20;
63288 63212 tRNA
ID metaerg.pl|07323
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
name tRNA_Arg_cct;
63422 64456 CDS
ID metaerg.pl|07324
allgo_ids GO:0003677; GO:0006355; GO:0046177;
allko_ids K06145;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07447.1 1 343 evalue:1.0e-159 qcov:99.70 identity:84.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00356; PF00532; PF13377; PF13407;
pfam_desc Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of LacI family; Periplasmic binding protein-like domain; Periplasmic binding protein domain;
pfam_id LacI; Peripla_BP_1; Peripla_BP_3; Peripla_BP_4;
pfam_target db:Pfam-A.hmm|PF00356.21 evalue:1.5e-18 score:65.6 best_domain_score:64.8 name:LacI; db:Pfam-A.hmm|PF00532.21 evalue:9.8e-18 score:63.8 best_domain_score:63.3 name:Peripla_BP_1; db:Pfam-A.hmm|PF13377.6 evalue:8.4e-18 score:64.5 best_domain_score:60.3 name:Peripla_BP_3; db:Pfam-A.hmm|PF13407.6 evalue:3.6e-14 score:52.2 best_domain_score:51.6 name:Peripla_BP_4;
sprot_desc HTH-type transcriptional regulator GntR;
sprot_id sp|P0ACP6|GNTR_ECOL6;
sprot_target db:uniprot_sprot|sp|P0ACP6|GNTR_ECOL6 10 344 evalue:1.2e-45 qcov:97.40 identity:36.50;
64890 64816 tRNA
ID metaerg.pl|07325
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
name tRNA_Val_gac;
65034 65900 CDS
ID metaerg.pl|07326
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068296242.1 1 275 evalue:1.4e-90 qcov:95.50 identity:60.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF05013;
pfam_desc N-formylglutamate amidohydrolase;
pfam_id FGase;
pfam_target db:Pfam-A.hmm|PF05013.12 evalue:2.8e-65 score:219.8 best_domain_score:219.5 name:FGase;
66571 65957 CDS
ID metaerg.pl|07327
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
67963 66773 CDS
ID metaerg.pl|07328
allec_ids 3.6.-.-;
allgo_ids GO:0005829; GO:0005525; GO:0003924; GO:0042802; GO:0046914; GO:0006974;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE47912.1 21 396 evalue:2.3e-131 qcov:94.90 identity:67.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF02492; PF07683;
pfam_desc CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain;
pfam_id cobW; CobW_C;
pfam_target db:Pfam-A.hmm|PF02492.19 evalue:1.5e-46 score:157.4 best_domain_score:157.1 name:cobW; db:Pfam-A.hmm|PF07683.14 evalue:1.7e-14 score:52.7 best_domain_score:51.8 name:CobW_C;
sprot_desc P-loop guanosine triphosphatase YjiA;
sprot_id sp|P24203|YJIA_ECOLI;
sprot_target db:uniprot_sprot|sp|P24203|YJIA_ECOLI 21 386 evalue:8.2e-35 qcov:92.40 identity:30.30;
68122 68724 CDS
ID metaerg.pl|07329
allec_ids 2.-.-.-;
allgo_ids GO:0016740; GO:0016787; GO:0016757; GO:0071555; GO:0009252; GO:0008360;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05495.1 1 200 evalue:1.7e-77 qcov:100.00 identity:71.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id LPSSYN-PWY; LIPA-CORESYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF03734;
pfam_desc L,D-transpeptidase catalytic domain;
pfam_id YkuD;
pfam_target db:Pfam-A.hmm|PF03734.14 evalue:8.8e-15 score:54.6 best_domain_score:54.2 name:YkuD;
sp YES;
sprot_desc Putative L,D-transpeptidase in ATP synthase subunits region ORF 5;
sprot_id sp|P05448|YAT5_RHOBL;
sprot_target db:uniprot_sprot|sp|P05448|YAT5_RHOBL 8 200 evalue:3.4e-45 qcov:96.50 identity:47.90;
68122 68211 signal_peptide
ID metaerg.pl|07330
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
69694 68846 CDS
ID metaerg.pl|07331
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
69986 70255 CDS
ID metaerg.pl|07332
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02956;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Defluviimonas_A;s__Defluviimonas_A sp002871005;
genomedb_acc GCF_002871005.1;
genomedb_target db:genomedb|GCF_002871005.1|WP_102225531.1 1 89 evalue:1.4e-39 qcov:100.00 identity:95.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00312;
pfam_desc Ribosomal protein S15;
pfam_id Ribosomal_S15;
pfam_target db:Pfam-A.hmm|PF00312.22 evalue:4.1e-37 score:125.5 best_domain_score:125.3 name:Ribosomal_S15;
sprot_desc 30S ribosomal protein S15;
sprot_id sp|Q28K15|RS15_JANSC;
sprot_target db:uniprot_sprot|sp|Q28K15|RS15_JANSC 1 89 evalue:8.9e-38 qcov:100.00 identity:87.60;
tigrfam_acc TIGR00952;
tigrfam_desc ribosomal protein uS15;
tigrfam_mainrole Protein synthesis;
tigrfam_name S15_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00952 evalue:2.2e-38 score:129.6 best_domain_score:129.4 name:TIGR00952;
71226 70360 CDS
ID metaerg.pl|07333
allec_ids 2.6.1.42;
allgo_ids GO:0003824; GO:0005829; GO:0004084; GO:0052656; GO:0052654; GO:0052655; GO:0009097; GO:0009098; GO:0009099;
allko_ids K00826;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06232.1 1 288 evalue:6.5e-152 qcov:100.00 identity:88.50;
kegg_pathway_id 00290; 00280; 00770;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id PWY0-1061; LEUSYN-PWY; PWY-5057; PWY-5078; VALSYN-PWY; PWY-5076; LEU-DEG2-PWY; BRANCHED-CHAIN-AA-SYN-PWY; PWY-5108; PWY-3001; ALANINE-VALINESYN-PWY; THREOCAT-PWY; PWY-5101; VALDEG-PWY; ILEUDEG-PWY; ILEUSYN-PWY; PWY-5103; PWY-5104;
metacyc_pathway_name superpathway of L-alanine biosynthesis;; L-leucine biosynthesis;; L-valine degradation II;; L-isoleucine degradation II;; L-valine biosynthesis;; L-leucine degradation III;; L-leucine degradation I;; superpathway of branched chain amino acid biosynthesis;; L-isoleucine biosynthesis V;; superpathway of L-isoleucine biosynthesis I;; L-alanine biosynthesis I;; superpathway of L-threonine metabolism;; L-isoleucine biosynthesis II;; L-valine degradation I;; L-isoleucine degradation I;; L-isoleucine biosynthesis I (from threonine);; L-isoleucine biosynthesis III;; L-isoleucine biosynthesis IV;;
metacyc_pathway_type ALANINE-SYN; Super-Pathways;; LEUCINE-SYN;; VALINE-DEG;; ISOLEUCINE-DEG;; VALINE-BIOSYNTHESIS;; LEUCINE-DEG;; LEUCINE-DEG;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; ALANINE-SYN;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN;; VALINE-DEG;; ISOLEUCINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;;
pfam_acc PF01063;
pfam_desc Amino-transferase class IV;
pfam_id Aminotran_4;
pfam_target db:Pfam-A.hmm|PF01063.19 evalue:2.7e-43 score:147.6 best_domain_score:147.4 name:Aminotran_4;
sprot_desc Branched-chain-amino-acid aminotransferase;
sprot_id sp|O86428|ILVE_PSEAE;
sprot_target db:uniprot_sprot|sp|O86428|ILVE_PSEAE 6 286 evalue:6.8e-55 qcov:97.60 identity:39.80;
tigrfam_acc TIGR01122;
tigrfam_desc branched-chain amino acid aminotransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ilvE_I;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01122 evalue:4.4e-84 score:281.3 best_domain_score:281.1 name:TIGR01122;
71395 71895 CDS
ID metaerg.pl|07334
allgo_ids GO:0003700; GO:0006355; GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_D;s__Rhodobacter_D sp002842855;
genomedb_acc GCA_002842855.1;
genomedb_target db:genomedb|GCA_002842855.1|PKP70179.1 5 163 evalue:4.1e-66 qcov:95.80 identity:82.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00392; PF13463; PF01047; PF12802;
pfam_desc Bacterial regulatory proteins, gntR family; Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id GntR; HTH_27; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF00392.21 evalue:4.9e-05 score:22.1 best_domain_score:20.9 name:GntR; db:Pfam-A.hmm|PF13463.6 evalue:1.3e-06 score:28.0 best_domain_score:27.2 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:8.8e-08 score:31.2 best_domain_score:30.5 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:2e-13 score:49.3 best_domain_score:49.3 name:MarR_2;
sprot_desc HTH-type transcriptional regulator PetP;
sprot_id sp|P31078|PETP_RHOCB;
sprot_target db:uniprot_sprot|sp|P31078|PETP_RHOCB 1 165 evalue:1.9e-65 qcov:99.40 identity:77.10;
71892 72692 CDS
ID metaerg.pl|07335
allgo_ids GO:0000160; GO:0003677; GO:0006355;
allko_ids K07709; K07644; K01769; K07676; K10681; K06379; K07650; K07647; K07717; K07675; K07769; K11383; K13761; K02486; K12767; K11357; K10125; K04757; K07716; K02489; K01768; K07710; K03388; K02668; K10916; K08479; K02030; K11527; K07678; K10715; K02480; K02482; K07636; K07653; K07638; K02484; K00760; K11640; K11356; K11711; K07642; K11231; K13490; K02491; K07708; K07645; K07677; K08282; K01937; K10909; K07704; K01120; K07673; K07639; K08475; K07646; K07641; K07652; K07682; K07654; K07637; K03407; K07648; K02478; K07679; K07718; K07651; K07768; K02575; K11354; K07778; K08884; K07711; K07659;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06234.1 29 262 evalue:1.3e-85 qcov:88.00 identity:73.90;
kegg_pathway_id 00240; 00230; 05111; 00983; 00790; 03090; 02020; 04011;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Drug metabolism - other enzymes; Folate biosynthesis; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:4.5e-30 score:103.3 best_domain_score:102.2 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:2.5e-19 score:68.4 best_domain_score:67.3 name:Trans_reg_C;
sprot_desc hypothetical protein;
sprot_id sp|P31079|PETR_RHOCB;
sprot_target db:uniprot_sprot|sp|P31079|PETR_RHOCB 24 260 evalue:3.1e-78 qcov:89.10 identity:65.80;
72704 74059 CDS
ID metaerg.pl|07336
allec_ids 5.5.1.2;
allgo_ids GO:0005737; GO:0047472; GO:0018842; GO:0019619; GO:0042952;
allko_ids K01756; K01857; K01679; K01744;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06235.1 1 450 evalue:7.6e-155 qcov:99.80 identity:66.40;
kegg_pathway_id 00020; 00230; 00720; 00252; 00362; 00910;
kegg_pathway_name Citrate cycle (TCA cycle); Purine metabolism; Reductive carboxylate cycle (CO2 fixation); Alanine and aspartate metabolism; Benzoate degradation via hydroxylation; Nitrogen metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY; PWY-2504; PWY-5183; PWY-5181; PWY-5431;
metacyc_pathway_name protocatechuate degradation II (ortho-cleavage pathway);; superpathway of aromatic compound degradation via 3-oxoadipate;; superpathway of aerobic toluene degradation;; toluene degradation III (aerobic) (via p-cresol);; aromatic compounds degradation via β-ketoadipate;;
metacyc_pathway_type Protocatechuate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Super-Pathways; TOLUENE-DEG;; Catechol-Degradation; Super-Pathways;;
pfam_acc PF10397; PF00206;
pfam_desc Adenylosuccinate lyase C-terminus; Lyase;
pfam_id ADSL_C; Lyase_1;
pfam_target db:Pfam-A.hmm|PF10397.9 evalue:5.3e-19 score:67.8 best_domain_score:65.8 name:ADSL_C; db:Pfam-A.hmm|PF00206.20 evalue:1.2e-45 score:155.5 best_domain_score:155.0 name:Lyase_1;
sprot_desc 3-carboxy-cis,cis-muconate cycloisomerase;
sprot_id sp|Q9I6Q8|PCAB_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I6Q8|PCAB_PSEAE 14 450 evalue:1.6e-87 qcov:96.90 identity:45.90;
74147 75514 CDS
ID metaerg.pl|07337
allec_ids 3.4.-.-;
allgo_ids GO:0006508; GO:0008237; GO:0005737;
allko_ids K03592;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068300494.1 14 455 evalue:4.9e-178 qcov:97.10 identity:74.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01523;
pfam_desc Putative modulator of DNA gyrase;
pfam_id PmbA_TldD;
pfam_target db:Pfam-A.hmm|PF01523.16 evalue:2e-51 score:174.7 best_domain_score:174.4 name:PmbA_TldD;
sprot_desc Metalloprotease PmbA;
sprot_id sp|P0AFK1|PMBA_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFK1|PMBA_ECO57 28 454 evalue:3.1e-54 qcov:93.80 identity:34.30;
75501 76325 CDS
ID metaerg.pl|07338
allec_ids 3.1.3.15;
allgo_ids GO:0046854; GO:0004401; GO:0046872; GO:0000105;
allko_ids K05602;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06237.1 1 268 evalue:5.9e-94 qcov:97.80 identity:69.40;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id PRPP-PWY; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; HISTIDINE-SYN;;
pfam_acc PF00459;
pfam_desc Inositol monophosphatase family;
pfam_id Inositol_P;
pfam_target db:Pfam-A.hmm|PF00459.25 evalue:2.6e-42 score:144.4 best_domain_score:144.1 name:Inositol_P;
sprot_desc Histidinol-phosphatase;
sprot_id sp|Q8NS80|HISN_CORGL;
sprot_target db:uniprot_sprot|sp|Q8NS80|HISN_CORGL 16 255 evalue:6.5e-15 qcov:87.60 identity:29.70;
76410 76655 CDS
ID metaerg.pl|07339
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06238.1 1 79 evalue:2.4e-27 qcov:97.50 identity:77.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF13773;
pfam_desc Domain of unknown function (DUF4170);
pfam_id DUF4170;
pfam_target db:Pfam-A.hmm|PF13773.6 evalue:5.8e-34 score:115.3 best_domain_score:115.1 name:DUF4170;
76682 77878 CDS
ID metaerg.pl|07340
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068300490.1 14 385 evalue:5.6e-61 qcov:93.50 identity:42.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
77875 78903 CDS
ID metaerg.pl|07341
allec_ids 2.7.1.130;
allgo_ids GO:0005524; GO:0009029; GO:0009245;
allko_ids K00912;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06240.1 1 342 evalue:1.6e-120 qcov:100.00 identity:66.40;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id LPSSYN-PWY; NAGLIPASYN-PWY; KDO-NAGLIPASYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid IVA biosynthesis;; superpathway of (Kdo)2-lipid A biosynthesis;;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;;
pfam_acc PF02606;
pfam_desc Tetraacyldisaccharide-1-P 4'-kinase;
pfam_id LpxK;
pfam_target db:Pfam-A.hmm|PF02606.14 evalue:3.9e-84 score:281.8 best_domain_score:281.5 name:LpxK;
sprot_desc Tetraacyldisaccharide 4'-kinase;
sprot_id sp|A4WNK8|LPXK_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WNK8|LPXK_RHOS5 1 325 evalue:3.0e-110 qcov:95.00 identity:65.20;
tigrfam_acc TIGR00682;
tigrfam_desc tetraacyldisaccharide 4'-kinase;
tigrfam_mainrole Cell envelope;
tigrfam_name lpxK;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00682 evalue:2e-52 score:177.4 best_domain_score:175.4 name:TIGR00682;
79914 78907 CDS
ID metaerg.pl|07342
allec_ids 1.2.1.12;
allgo_ids GO:0016620; GO:0055114; GO:0005737; GO:0004365; GO:0051287; GO:0050661; GO:0006006; GO:0006096;
allko_ids K00134; K10705;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06061.1 1 325 evalue:2.7e-133 qcov:97.00 identity:74.20;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id GLUCONEO-PWY; P441-PWY; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; PWY-5464; ANAGLYCOLYSIS-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; P185-PWY; P124-PWY; GLYCOLYSIS-E-D; PWY-5484; P122-PWY; P461-PWY; GLYCOLYSIS;
metacyc_pathway_name gluconeogenesis I;; superpathway of N-acetylneuraminate degradation;; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; formaldehyde assimilation III (dihydroxyacetone cycle);; Bifidobacterium shunt;; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis II (from fructose 6-phosphate);; heterolactic fermentation;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis I (from glucose 6-phosphate);;
metacyc_pathway_type Gluconeogenesis;; CARBOXYLATES-DEG; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Formaldehyde-Assimilation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:9.4e-38 score:128.5 best_domain_score:127.9 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:1.7e-24 score:85.3 best_domain_score:84.6 name:Gp_dh_N;
sprot_desc Glyceraldehyde-3-phosphate dehydrogenase;
sprot_id sp|P51009|G3P_XANFL;
sprot_target db:uniprot_sprot|sp|P51009|G3P_XANFL 1 330 evalue:3.4e-74 qcov:98.50 identity:44.80;
79917 80666 CDS
ID metaerg.pl|07343
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
sp YES;
79917 80000 signal_peptide
ID metaerg.pl|07344
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
81156 80686 CDS
ID metaerg.pl|07345
allko_ids K08282; K06379; K04757; K01768; K08801;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE48017.1 23 152 evalue:3.3e-33 qcov:83.30 identity:51.50;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF13581;
pfam_desc Histidine kinase-like ATPase domain;
pfam_id HATPase_c_2;
pfam_target db:Pfam-A.hmm|PF13581.6 evalue:7.7e-17 score:60.7 best_domain_score:60.3 name:HATPase_c_2;
81671 81324 CDS
ID metaerg.pl|07346
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109531333.1 1 104 evalue:9.6e-30 qcov:90.40 identity:69.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01740; PF13466;
pfam_desc STAS domain; STAS domain;
pfam_id STAS; STAS_2;
pfam_target db:Pfam-A.hmm|PF01740.21 evalue:4e-12 score:45.0 best_domain_score:44.8 name:STAS; db:Pfam-A.hmm|PF13466.6 evalue:3.2e-12 score:45.9 best_domain_score:45.5 name:STAS_2;
81757 82935 CDS
ID metaerg.pl|07347
allec_ids 2.3.1.9; 2.3.1.16;
allgo_ids GO:0016747; GO:0005737; GO:0003985; GO:0003988; GO:0006635;
allko_ids K07513; K07508; K07823; K00626; K00632; K07509; K02615; K07550;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06070.1 1 391 evalue:7.5e-183 qcov:99.70 identity:83.60;
kegg_pathway_id 00071; 00072; 02020; 00281; 00280; 00310; 00592; 00650; 00640; 00062; 00620; 01040; 00362; 00380; 00632; 00120;
kegg_pathway_name Fatty acid metabolism; Synthesis and degradation of ketone bodies; Two-component system - General; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; alpha-Linolenic acid metabolism; Butanoate metabolism; Propanoate metabolism; Fatty acid elongation in mitochondria; Pyruvate metabolism; Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation; Tryptophan metabolism; Benzoate degradation via CoA ligation; Bile acid biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id PWY-922; GLUDEG-II-PWY; PWY-5910; PWY-6435; PWY-561; PWY-5184; PWY1-3; PWY-6146; FAO-PWY; PWY-6174; ILEUDEG-PWY; ACETOACETATE-DEG-PWY; PWY-5676; PWY-5136; PWY-5177; PWY-5327; CENTFERM-PWY; PWY66-368; PWY-5789; TRYPTOPHAN-DEGRADATION-1;
metacyc_pathway_name mevalonate pathway I;; L-glutamate degradation VII (to butanoate);; superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; 4-hydroxybenzoate biosynthesis III (plants);; superpathway of glyoxylate cycle and fatty acid degradation;; toluene degradation VI (anaerobic);; polyhydroxybutanoate biosynthesis;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; fatty acid β-oxidation I;; mevalonate pathway II (archaea);; L-isoleucine degradation I;; acetoacetate degradation (to acetyl CoA);; acetyl-CoA fermentation to butanoate II;; fatty acid β-oxidation II (peroxisome);; glutaryl-CoA degradation;; superpathway of L-lysine degradation;; pyruvate fermentation to butanoate;; ketolysis;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; L-tryptophan degradation III (eukaryotic);;
metacyc_pathway_type Mevalonate-Pathways;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; 4-Hydroxybenzoate-Biosynthesis;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Storage-Compounds-Biosynthesis;; Biosynthesis; Super-Pathways;; Fatty-Acid-Degradation;; Mevalonate-Pathways;; ISOLEUCINE-DEG;; Fatty-Acid-and-Lipid-Degradation;; Acetyl-CoA-Butyrate; Super-Pathways;; Fatty-Acid-Degradation;; CARBOXYLATES-DEG;; LYSINE-DEG; Super-Pathways;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;; OTHER-ENERGY;; Autotrophic-CO2-Fixation;; Super-Pathways; TRYPTOPHAN-DEG;;
pfam_acc PF02803; PF00108;
pfam_desc Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF02803.18 evalue:1.5e-42 score:143.3 best_domain_score:142.0 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:1.5e-81 score:272.8 best_domain_score:272.5 name:Thiolase_N;
sprot_desc Acetyl-CoA acetyltransferase;
sprot_id sp|Q9I2A8|ATOB_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I2A8|ATOB_PSEAE 1 391 evalue:2.6e-89 qcov:99.70 identity:48.30;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:2.2e-118 score:394.7 best_domain_score:394.5 name:TIGR01930;
tm_num 1;
81757 82935 transmembrane_helix
ID metaerg.pl|07348
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
topology i81817-81885o;
83085 84104 CDS
ID metaerg.pl|07349
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07100.1 4 337 evalue:2.2e-151 qcov:98.50 identity:78.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF01070; PF03060;
pfam_desc FMN-dependent dehydrogenase; Nitronate monooxygenase;
pfam_id FMN_dh; NMO;
pfam_target db:Pfam-A.hmm|PF01070.18 evalue:4.6e-09 score:35.0 best_domain_score:33.4 name:FMN_dh; db:Pfam-A.hmm|PF03060.15 evalue:2.8e-21 score:75.5 best_domain_score:67.7 name:NMO;
84574 84221 CDS
ID metaerg.pl|07350
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07406.1 1 108 evalue:1.4e-28 qcov:92.30 identity:62.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
85727 84738 CDS
ID metaerg.pl|07351
allec_ids 3.6.-.-; 2.7.-.-;
allgo_ids GO:0005524; GO:0005525; GO:0003924;
allko_ids K11942; K07588;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05812.1 4 318 evalue:5.2e-137 qcov:95.70 identity:82.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF02492; PF03308;
pfam_desc CobW/HypB/UreG, nucleotide-binding domain; Methylmalonyl Co-A mutase-associated GTPase MeaB;
pfam_id cobW; MeaB;
pfam_target db:Pfam-A.hmm|PF02492.19 evalue:2.2e-07 score:29.9 best_domain_score:26.7 name:cobW; db:Pfam-A.hmm|PF03308.16 evalue:1.4e-93 score:312.0 best_domain_score:311.7 name:MeaB;
sprot_desc Putative GTPase CC_2483;
sprot_id sp|P37895|Y2483_CAUVC;
sprot_target db:uniprot_sprot|sp|P37895|Y2483_CAUVC 5 318 evalue:1.0e-75 qcov:95.40 identity:54.60;
tigrfam_acc TIGR00750;
tigrfam_desc LAO/AO transport system ATPase;
tigrfam_mainrole Regulatory functions;
tigrfam_name lao;
tigrfam_sub1role Protein interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00750 evalue:2.2e-88 score:295.4 best_domain_score:295.2 name:TIGR00750;
85823 88267 CDS
ID metaerg.pl|07352
allec_ids 3.6.4.13; 3.6.4.-;
allgo_ids GO:0003676; GO:0005524; GO:0008026;
allko_ids K03579; K14442; K13185; K01509; K03578; K13184; K12815; K12820; K13117; K12818; K12813; K12814;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE44957.1 6 812 evalue:0.0e+00 qcov:99.10 identity:73.10;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00270; PF04408; PF00271; PF08482;
pfam_desc DEAD/DEAH box helicase; Helicase associated domain (HA2); Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal;
pfam_id DEAD; HA2; Helicase_C; HrpB_C;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:7.9e-07 score:28.2 best_domain_score:27.6 name:DEAD; db:Pfam-A.hmm|PF04408.23 evalue:3.7e-10 score:39.3 best_domain_score:38.3 name:HA2; db:Pfam-A.hmm|PF00271.31 evalue:8.7e-07 score:28.5 best_domain_score:27.8 name:Helicase_C; db:Pfam-A.hmm|PF08482.10 evalue:4.3e-44 score:149.4 best_domain_score:148.6 name:HrpB_C;
sprot_desc ATP-dependent RNA helicase HrpB;
sprot_id sp|P37024|HRPB_ECOLI;
sprot_target db:uniprot_sprot|sp|P37024|HRPB_ECOLI 11 810 evalue:3.5e-133 qcov:98.30 identity:40.40;
tigrfam_acc TIGR01970;
tigrfam_desc ATP-dependent helicase HrpB;
tigrfam_mainrole Unknown function;
tigrfam_name DEAH_box_HrpB;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01970 evalue:2e-255 score:849.2 best_domain_score:849.0 name:TIGR01970;
89383 88547 CDS
ID metaerg.pl|07353
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_083195086.1 11 254 evalue:1.1e-47 qcov:87.80 identity:52.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
89481 90542 CDS
ID metaerg.pl|07354
allgo_ids GO:0005829; GO:0004033; GO:0034198;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08146.1 11 353 evalue:4.9e-133 qcov:97.20 identity:69.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00248;
pfam_desc Aldo/keto reductase family;
pfam_id Aldo_ket_red;
pfam_target db:Pfam-A.hmm|PF00248.21 evalue:2.4e-59 score:200.2 best_domain_score:200.0 name:Aldo_ket_red;
sprot_desc hypothetical protein;
sprot_id sp|P0A9T4|TAS_ECOLI;
sprot_target db:uniprot_sprot|sp|P0A9T4|TAS_ECOLI 10 352 evalue:1.7e-60 qcov:97.20 identity:40.20;
90552 91088 CDS
ID metaerg.pl|07355
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter_B;s__Pseudorhodobacter_B sp000176015;
genomedb_acc GCF_000176015.1;
genomedb_target db:genomedb|GCF_000176015.1|WP_050786786.1 1 178 evalue:1.7e-17 qcov:100.00 identity:37.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
sp YES;
90552 90602 lipoprotein_signal_peptide
ID metaerg.pl|07356
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
91186 91764 CDS
ID metaerg.pl|07357
allgo_ids GO:0003839; GO:0006751;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05730.1 1 190 evalue:1.8e-60 qcov:99.00 identity:65.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF04752;
pfam_desc ChaC-like protein;
pfam_id ChaC;
pfam_target db:Pfam-A.hmm|PF04752.12 evalue:5.4e-07 score:29.1 best_domain_score:28.6 name:ChaC;
91880 92374 CDS
ID metaerg.pl|07358
allec_ids 4.2.1.59; 4.2.1.-;
allgo_ids GO:0005737; GO:0008659; GO:0047451; GO:0006633; GO:0009245;
allko_ids K02372;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068302054.1 8 163 evalue:2.6e-65 qcov:95.10 identity:80.10;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
metacyc_pathway_id PWY-5156; PWY-5184; BENZCOA-PWY; PWY-6007; PWY-5367; PWY-5972; PWY-6282; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; CARNMET-PWY; PWY-5971; PWY-6519; PWY-5061; FASYN-ELONG-PWY; CENTBENZCOA-PWY; PWY-6113; PWY-6285; PWY-5989; PWYG-321; BIOTIN-BIOSYNTHESIS-PWY; PWY1A0-6325; PWY0-881;
metacyc_pathway_name superpathway of fatty acid biosynthesis II (plant);; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis II;; petroselinate biosynthesis;; stearate biosynthesis I (animals and fungi);; palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate);; 4-hydroxyphenylacetate degradation;; L-carnitine degradation I;; palmitate biosynthesis II (bacteria and plants);; 8-amino-7-oxononanoate biosynthesis I;; 6,7,4'-trihydroxyisoflavone biosynthesis;; fatty acid elongation -- saturated;; benzoyl-CoA degradation II (anaerobic);; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; stearate biosynthesis II (bacteria and plants);; mycolate biosynthesis;; biotin biosynthesis I;; actinorhodin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; DMNT-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Stearate-Biosynthesis;; Palmitoleate-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; CARN-DEG;; Palmitate-Biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis;; Benzoyl-CoA-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Stearate-Biosynthesis;; Fatty-acid-biosynthesis;; BIOTIN-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF07977; PF01575;
pfam_desc FabA-like domain; MaoC like domain;
pfam_id FabA; MaoC_dehydratas;
pfam_target db:Pfam-A.hmm|PF07977.13 evalue:1.2e-32 score:111.6 best_domain_score:111.3 name:FabA; db:Pfam-A.hmm|PF01575.19 evalue:0.00017 score:20.4 best_domain_score:19.3 name:MaoC_dehydratas;
sprot_desc 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ;
sprot_id sp|Q166E7|FABZ_ROSDO;
sprot_target db:uniprot_sprot|sp|Q166E7|FABZ_ROSDO 14 159 evalue:2.9e-50 qcov:89.00 identity:64.90;
tigrfam_acc TIGR01750;
tigrfam_desc beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabZ;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01750 evalue:1.2e-53 score:179.9 best_domain_score:179.8 name:TIGR01750;
92374 92676 CDS
ID metaerg.pl|07359
allko_ids K00674; K02536; K04042; K00677; K00640;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105320787.1 1 101 evalue:3.2e-37 qcov:100.00 identity:77.20;
kegg_pathway_id 00920; 00540; 00530; 00300; 00272;
kegg_pathway_name Sulfur metabolism; Lipopolysaccharide biosynthesis; Aminosugars metabolism; Lysine biosynthesis; Cysteine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.755661; 0.0253656; 24.7756; 3.60758; 29.1642;
pfam_acc PF00132;
pfam_desc Bacterial transferase hexapeptide (six repeats);
pfam_id Hexapep;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:3.3e-15 score:54.4 best_domain_score:38.6 name:Hexapep;
>Feature NODE_48_length_92499_cov_7.50252
3 722 CDS
ID metaerg.pl|07360
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Aliifodinibius;s__Aliifodinibius roseus;
genomedb_acc GCF_900129315.1;
genomedb_target db:genomedb|GCF_900129315.1|WP_073065360.1 2 236 evalue:9.9e-53 qcov:98.30 identity:44.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
746 1360 CDS
ID metaerg.pl|07361
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Marinobacterium_A;s__Marinobacterium_A rhizophilum;
genomedb_acc GCF_000378045.1;
genomedb_target db:genomedb|GCF_000378045.1|WP_020681405.1 6 190 evalue:3.8e-37 qcov:90.70 identity:44.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF04367;
pfam_desc Protein of unknown function (DUF502);
pfam_id DUF502;
pfam_target db:Pfam-A.hmm|PF04367.13 evalue:2.5e-21 score:74.8 best_domain_score:73.5 name:DUF502;
tm_num 2;
746 1360 transmembrane_helix
ID metaerg.pl|07362
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i764-832o890-952i;
1477 2337 CDS
ID metaerg.pl|07363
allec_ids 1.8.4.-;
allgo_ids GO:0005515; GO:0015036; GO:0004601;
allko_ids K04097; K00799; K11209;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2965;s__UBA2965 sp002348385;
genomedb_acc GCA_002348385.1;
genomedb_target db:genomedb|GCA_002348385.1|DEBD01000037.1_5 7 282 evalue:3.5e-129 qcov:96.50 identity:79.00;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00043; PF13410; PF14497; PF02798;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_2; GST_C_3; GST_N;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:3.6e-08 score:32.8 best_domain_score:32.1 name:GST_C; db:Pfam-A.hmm|PF13410.6 evalue:2.1e-06 score:26.9 best_domain_score:25.7 name:GST_C_2; db:Pfam-A.hmm|PF14497.6 evalue:2.3e-05 score:23.7 best_domain_score:23.1 name:GST_C_3; db:Pfam-A.hmm|PF02798.20 evalue:2.3e-06 score:27.1 best_domain_score:26.1 name:GST_N;
sprot_desc Disulfide-bond oxidoreductase YghU;
sprot_id sp|Q46845|YGHU_ECOLI;
sprot_target db:uniprot_sprot|sp|Q46845|YGHU_ECOLI 1 282 evalue:3.2e-105 qcov:98.60 identity:64.20;
2388 3110 CDS
ID metaerg.pl|07364
allko_ids K00799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2168;s__UBA2168 sp002327525;
genomedb_acc GCA_002327525.1;
genomedb_target db:genomedb|GCA_002327525.1|DCWG01000098.1_3 4 239 evalue:1.1e-75 qcov:98.30 identity:60.20;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF14497;
pfam_desc Glutathione S-transferase, C-terminal domain;
pfam_id GST_C_3;
pfam_target db:Pfam-A.hmm|PF14497.6 evalue:3e-21 score:74.7 best_domain_score:73.7 name:GST_C_3;
4285 3125 CDS
ID metaerg.pl|07365
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Arsukibacterium;s__Arsukibacterium sp002415085;
genomedb_acc GCA_002415085.1;
genomedb_target db:genomedb|GCA_002415085.1|DIBV01000006.1_272 8 347 evalue:3.2e-53 qcov:88.10 identity:40.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF11737;
pfam_desc Protein of unknown function (DUF3300);
pfam_id DUF3300;
pfam_target db:Pfam-A.hmm|PF11737.8 evalue:3.4e-69 score:232.1 best_domain_score:231.6 name:DUF3300;
sp YES;
tm_num 1;
3125 3202 signal_peptide
ID metaerg.pl|07366
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
4285 3125 transmembrane_helix
ID metaerg.pl|07367
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i3143-3196o;
4646 7720 CDS
ID metaerg.pl|07368
allgo_ids GO:0000155; GO:0007165;
allko_ids K07647; K13040; K10942; K07717; K12767; K02486; K11383; K11520; K14509; K07769; K04757; K10125; K11629; K11357; K07709; K13532; K07644; K01769; K06379; K10681; K02030; K11527; K13587; K10715; K07678; K08801; K02482; K02480; K07653; K07638; K07636; K07697; K02489; K07716; K07640; K07710; K07656; K01768; K02668; K03388; K08479; K10916; K11231; K07643; K02491; K07708; K07645; K07677; K08282; K02484; K11356; K11640; K11711; K07642; K07679; K07648; K07651; K07698; K11633; K07768; K07711; K13533; K11328; K13598; K07641; K07646; K08475; K07639; K01120; K07652; K07654; K00936; K07649; K03407;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL39528.1 1 1015 evalue:1.2e-224 qcov:99.10 identity:42.50;
kegg_pathway_id 00790; 05111; 00230; 04011; 02020; 03090;
kegg_pathway_name Folate biosynthesis; Vibrio cholerae pathogenic cycle; Purine metabolism; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF02518; PF00512; PF07494; PF07495;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Two component regulator propeller; Y_Y_Y domain;
pfam_id HATPase_c; HisKA; Reg_prop; Y_Y_Y;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:5.1e-21 score:74.5 best_domain_score:72.9 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:5.8e-08 score:31.9 best_domain_score:30.9 name:HisKA; db:Pfam-A.hmm|PF07494.11 evalue:5.9e-38 score:123.4 best_domain_score:18.3 name:Reg_prop; db:Pfam-A.hmm|PF07495.13 evalue:8.2e-07 score:28.1 best_domain_score:27.6 name:Y_Y_Y;
sp YES;
tm_num 1;
4646 4702 signal_peptide
ID metaerg.pl|07369
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
4646 7720 transmembrane_helix
ID metaerg.pl|07370
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology o6899-6958i;
7729 8994 CDS
ID metaerg.pl|07371
allko_ids K00380;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas;s__Hyphomonas sp000961795;
genomedb_acc GCA_000961795.1;
genomedb_target db:genomedb|GCA_000961795.1|KJS36786.1 9 397 evalue:1.1e-75 qcov:92.40 identity:43.40;
kegg_pathway_id 00920;
kegg_pathway_name Sulfur metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF03929;
pfam_desc PepSY-associated TM region;
pfam_id PepSY_TM;
pfam_target db:Pfam-A.hmm|PF03929.16 evalue:8.2e-44 score:149.6 best_domain_score:149.1 name:PepSY_TM;
tm_num 5;
7729 8994 transmembrane_helix
ID metaerg.pl|07372
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i7789-7857o8176-8244i8350-8418o8791-8859i8920-8988o;
9802 8987 CDS
ID metaerg.pl|07373
allgo_ids GO:0016020; GO:0055085; GO:0005887; GO:0015604;
allko_ids K02042;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Rubritepida;s__Rubritepida flocculans;
genomedb_acc GCF_000425365.1;
genomedb_target db:genomedb|GCF_000425365.1|WP_027283748.1 7 267 evalue:7.1e-100 qcov:96.30 identity:72.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:9.8e-08 score:31.2 best_domain_score:31.2 name:BPD_transp_1;
sprot_desc Phosphite transport system permease protein PtxC;
sprot_id sp|O69053|PTXC_PSEST;
sprot_target db:uniprot_sprot|sp|O69053|PTXC_PSEST 60 267 evalue:2.7e-37 qcov:76.80 identity:44.20;
tigrfam_acc TIGR01097;
tigrfam_desc phosphonate ABC transporter, permease protein PhnE;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name PhnE;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01097 evalue:1.9e-82 score:275.7 best_domain_score:275.4 name:TIGR01097;
tm_num 6;
9802 8987 transmembrane_helix
ID metaerg.pl|07374
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i9044-9112o9233-9301i9380-9448o9551-9619i9638-9691o9704-9772i;
10611 9802 CDS
ID metaerg.pl|07375
allgo_ids GO:0016020; GO:0055085; GO:0005887; GO:0015604; GO:0006817;
allko_ids K02042;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__Pseudohongiella;s__Pseudohongiella sp002711845;
genomedb_acc GCA_002711845.1;
genomedb_target db:genomedb|GCA_002711845.1|MBC53163.1 5 266 evalue:3.0e-90 qcov:97.40 identity:66.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.3e-12 score:45.4 best_domain_score:45.4 name:BPD_transp_1;
sprot_desc Phosphate-import permease protein PhnE;
sprot_id sp|A0QQ68|PHNE_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QQ68|PHNE_MYCS2 1 268 evalue:1.2e-37 qcov:99.60 identity:36.00;
tigrfam_acc TIGR01097;
tigrfam_desc phosphonate ABC transporter, permease protein PhnE;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name PhnE;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01097 evalue:8.2e-79 score:263.8 best_domain_score:263.6 name:TIGR01097;
tm_num 4;
10611 9802 transmembrane_helix
ID metaerg.pl|07376
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i9868-9927o10060-10128i10189-10257o10525-10593i;
11423 10608 CDS
ID metaerg.pl|07377
allec_ids 7.3.2.2; 3.6.3.28;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0102017;
allko_ids K11076; K05816; K02013; K02031; K01998; K10112; K10111; K02065; K01995; K02049; K11962; K02000; K02023; K02041; K10243; K01990; K02032; K02017; K11084; K02052; K02006; K02004; K01997; K02003; K02010; K05847; K02045; K11072; K02068; K02071; K06861; K01996;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__UBA6159;s__UBA6159 sp002422345;
genomedb_acc GCA_002422345.1;
genomedb_target db:genomedb|GCA_002422345.1|DIUL01000025.1_4 1 260 evalue:1.9e-97 qcov:95.90 identity:68.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.9e-12 score:45.8 best_domain_score:26.7 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.3e-37 score:128.6 best_domain_score:128.3 name:ABC_tran;
sprot_desc Phosphonates import ATP-binding protein PhnC 1;
sprot_id sp|Q2IYS5|PHNC1_RHOP2;
sprot_target db:uniprot_sprot|sp|Q2IYS5|PHNC1_RHOP2 1 261 evalue:3.6e-98 qcov:96.30 identity:69.50;
tigrfam_acc TIGR02315;
tigrfam_desc phosphonate ABC transporter, ATP-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ABC_phnC;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02315 evalue:1.7e-96 score:321.5 best_domain_score:321.3 name:TIGR02315;
12378 11428 CDS
ID metaerg.pl|07378
genomedb_OC d__Bacteria;p__Chrysiogenetota;c__Chrysiogenetes;o__Chrysiogenales;f__Chrysiogenaceae;g__Chrysiogenes;s__Chrysiogenes arsenatis;
genomedb_acc GCF_000469585.1;
genomedb_target db:genomedb|GCF_000469585.1|WP_084417719.1 5 316 evalue:1.1e-112 qcov:98.70 identity:62.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF12974; PF00497;
pfam_desc ABC transporter, phosphonate, periplasmic substrate-binding protein ; Bacterial extracellular solute-binding proteins, family 3;
pfam_id Phosphonate-bd; SBP_bac_3;
pfam_target db:Pfam-A.hmm|PF12974.7 evalue:2.2e-54 score:183.9 best_domain_score:183.6 name:Phosphonate-bd; db:Pfam-A.hmm|PF00497.20 evalue:4.7e-06 score:25.4 best_domain_score:22.7 name:SBP_bac_3;
sp YES;
tigrfam_acc TIGR01098;
tigrfam_desc phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3A0109s03R;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01098 evalue:1.8e-65 score:220.1 best_domain_score:219.9 name:TIGR01098;
11428 11481 signal_peptide
ID metaerg.pl|07379
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
15044 12438 CDS
ID metaerg.pl|07380
allgo_ids GO:0004181; GO:0006508; GO:0008270;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726630.1 9 867 evalue:3.6e-294 qcov:99.00 identity:59.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00246;
pfam_desc Zinc carboxypeptidase;
pfam_id Peptidase_M14;
pfam_target db:Pfam-A.hmm|PF00246.24 evalue:4.2e-17 score:62.1 best_domain_score:61.5 name:Peptidase_M14;
sp YES;
12438 12491 signal_peptide
ID metaerg.pl|07381
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
16399 15098 CDS
ID metaerg.pl|07382
allec_ids 3.4.13.19;
allgo_ids GO:0006508; GO:0016805; GO:0016021; GO:0046872; GO:0008237;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hirschia;s__Hirschia maritima;
genomedb_acc GCF_000378345.1;
genomedb_target db:genomedb|GCF_000378345.1|WP_018996638.1 33 429 evalue:2.5e-131 qcov:91.70 identity:59.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF01244;
pfam_desc Membrane dipeptidase (Peptidase family M19);
pfam_id Peptidase_M19;
pfam_target db:Pfam-A.hmm|PF01244.21 evalue:2.1e-98 score:328.6 best_domain_score:328.4 name:Peptidase_M19;
sp YES;
sprot_desc Putative dipeptidase TSTA_079200;
sprot_id sp|B8LWT1|DPEP2_TALSN;
sprot_target db:uniprot_sprot|sp|B8LWT1|DPEP2_TALSN 84 432 evalue:3.0e-30 qcov:80.60 identity:27.90;
15098 15193 lipoprotein_signal_peptide
ID metaerg.pl|07383
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
16527 18341 CDS
ID metaerg.pl|07384
allgo_ids GO:0016209; GO:0016491; GO:0055114;
allko_ids K03386; K11065;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2168;s__UBA2168 sp002327525;
genomedb_acc GCA_002327525.1;
genomedb_target db:genomedb|GCA_002327525.1|DCWG01000060.1_4 27 593 evalue:6.5e-210 qcov:93.90 identity:60.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:9.7e-12 score:44.1 best_domain_score:43.5 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:4.9e-13 score:48.2 best_domain_score:47.6 name:Redoxin;
sp YES;
tm_num 1;
16527 16625 signal_peptide
ID metaerg.pl|07385
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
16527 18341 transmembrane_helix
ID metaerg.pl|07386
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i16563-16631o;
18395 19189 CDS
ID metaerg.pl|07387
allec_ids 3.1.2.6;
allgo_ids GO:0004416; GO:0046872; GO:0019243;
allko_ids K01069; K01180; K01011;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000057.1_53 1 264 evalue:7.9e-120 qcov:100.00 identity:77.70;
kegg_pathway_id 00272; 00620;
kegg_pathway_name Cysteine metabolism; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
metacyc_pathway_id PWY-5386; METHGLYUT-PWY;
metacyc_pathway_name methylglyoxal degradation I;; superpathway of methylglyoxal degradation;;
metacyc_pathway_type Methylglyoxal-Detoxification;; Aldehyde-Degradation; Super-Pathways;;
pfam_acc PF16123; PF00753;
pfam_desc Hydroxyacylglutathione hydrolase C-terminus; Metallo-beta-lactamase superfamily;
pfam_id HAGH_C; Lactamase_B;
pfam_target db:Pfam-A.hmm|PF16123.5 evalue:4.1e-14 score:52.1 best_domain_score:51.6 name:HAGH_C; db:Pfam-A.hmm|PF00753.27 evalue:3.1e-13 score:49.4 best_domain_score:47.8 name:Lactamase_B;
sprot_desc Hydroxyacylglutathione hydrolase;
sprot_id sp|Q12BV7|GLO2_POLSJ;
sprot_target db:uniprot_sprot|sp|Q12BV7|GLO2_POLSJ 1 264 evalue:2.7e-106 qcov:100.00 identity:69.70;
19301 20620 CDS
ID metaerg.pl|07388
allgo_ids GO:0000155; GO:0007165;
allko_ids K07708; K07645; K07677; K07704; K10909; K08282; K07643; K11231; K02491; K11711; K07642; K02484; K11356; K11640; K11354; K07683; K07778; K11633; K07768; K08884; K07711; K11328; K13533; K02478; K07679; K07648; K07651; K07698; K07718; K07654; K07777; K07649; K00936; K07682; K03407; K07637; K07646; K13598; K07641; K07673; K08475; K07639; K07652; K02486; K11383; K12767; K11520; K07769; K14509; K04757; K11357; K11629; K10125; K07647; K10942; K13040; K07717; K07675; K01769; K07650; K10681; K07676; K06379; K13532; K07709; K07644; K02482; K08801; K02480; K07638; K07653; K07636; K13587; K11527; K02030; K07678; K10715; K02668; K03388; K07674; K08479; K10916; K02489; K07697; K07716; K07710; K07640; K01768; K07656;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thioflavicoccus;s__Thioflavicoccus mobilis;
genomedb_acc GCF_000327045.1;
genomedb_target db:genomedb|GCF_000327045.1|WP_015280325.1 21 418 evalue:1.5e-67 qcov:90.70 identity:38.60;
kegg_pathway_id 04011; 02020; 03090; 05111; 00790; 00230;
kegg_pathway_name MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Vibrio cholerae pathogenic cycle; Folate biosynthesis; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF02518; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:6.1e-18 score:64.6 best_domain_score:63.5 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.4e-09 score:37.1 best_domain_score:37.1 name:HisKA;
22389 20710 CDS
ID metaerg.pl|07389
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__UBA1383;s__UBA1383 sp002305415;
genomedb_acc GCA_002305415.1;
genomedb_target db:genomedb|GCA_002305415.1|DBQX01000103.1_10 1 559 evalue:5.8e-96 qcov:100.00 identity:43.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:1.9e-34 score:118.4 best_domain_score:114.9 name:Proton_antipo_M;
sp YES;
tm_num 16;
20710 20766 lipoprotein_signal_peptide
ID metaerg.pl|07390
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
22389 20710 transmembrane_helix
ID metaerg.pl|07391
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology o20722-20781i20794-20853o20911-20964i21001-21054o21064-21120i21157-21225o21283-21351i21370-21438o21481-21540i21559-21627o21643-21711i21748-21807o21850-21918i22003-22071o22084-22143i22330-22383o;
23885 22386 CDS
ID metaerg.pl|07392
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
allko_ids K05568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__UBA2363;g__UBA2363;s__UBA2363 sp002344355;
genomedb_acc GCA_002344355.1;
genomedb_target db:genomedb|GCA_002344355.1|DDTN01000026.1_74 6 494 evalue:9.2e-170 qcov:98.00 identity:67.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00361; PF00662;
pfam_desc Proton-conducting membrane transporter; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus;
pfam_id Proton_antipo_M; Proton_antipo_N;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:4.7e-61 score:205.8 best_domain_score:205.8 name:Proton_antipo_M; db:Pfam-A.hmm|PF00662.20 evalue:2e-06 score:27.0 best_domain_score:26.5 name:Proton_antipo_N;
sprot_desc NADH-quinone oxidoreductase subunit N;
sprot_id sp|B1I6I5|NUON_DESAP;
sprot_target db:uniprot_sprot|sp|B1I6I5|NUON_DESAP 9 451 evalue:5.1e-50 qcov:88.80 identity:35.30;
tm_num 13;
23885 22386 transmembrane_helix
ID metaerg.pl|07393
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology o22398-22466i22503-22571o22629-22697i22716-22775o22785-22844i22881-22949o23007-23072i23106-23174o23232-23285i23340-23408o23517-23585i23622-23690o23787-23855i;
25390 23882 CDS
ID metaerg.pl|07394
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
allko_ids K05568;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__UBA1383;s__UBA1383 sp002305415;
genomedb_acc GCA_002305415.1;
genomedb_target db:genomedb|GCA_002305415.1|DBQX01000103.1_12 8 495 evalue:4.4e-119 qcov:97.20 identity:52.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:5.3e-56 score:189.2 best_domain_score:188.5 name:Proton_antipo_M;
sp YES;
sprot_desc NADH-quinone oxidoreductase subunit N;
sprot_id sp|B1I6I5|NUON_DESAP;
sprot_target db:uniprot_sprot|sp|B1I6I5|NUON_DESAP 8 480 evalue:3.8e-53 qcov:94.20 identity:35.30;
tm_num 14;
23882 23929 lipoprotein_signal_peptide
ID metaerg.pl|07395
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
25390 23882 transmembrane_helix
ID metaerg.pl|07396
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology o23891-23947i23966-24034o24101-24169i24203-24256o24266-24325i24362-24430o24488-24556i24593-24661o24689-24757i24776-24844o24872-24940i24998-25066o25109-25177i25268-25336o;
25749 25390 CDS
ID metaerg.pl|07397
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__UBA1383;s__UBA1383 sp002305415;
genomedb_acc GCA_002305415.1;
genomedb_target db:genomedb|GCA_002305415.1|DBQX01000103.1_13 8 97 evalue:1.0e-18 qcov:75.60 identity:58.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00420;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
pfam_id Oxidored_q2;
pfam_target db:Pfam-A.hmm|PF00420.24 evalue:2.2e-22 score:77.9 best_domain_score:77.6 name:Oxidored_q2;
tm_num 3;
25749 25390 transmembrane_helix
ID metaerg.pl|07398
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology o25399-25467i25486-25554o25582-25650i;
26693 25746 CDS
ID metaerg.pl|07399
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__UBA1383;s__UBA1383 sp002305415;
genomedb_acc GCA_002305415.1;
genomedb_target db:genomedb|GCA_002305415.1|DBQX01000103.1_14 8 315 evalue:4.9e-60 qcov:97.80 identity:49.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF13244; PF04039;
pfam_desc Domain of unknown function (DUF4040); Domain related to MnhB subunit of Na+/H+ antiporter;
pfam_id DUF4040; MnhB;
pfam_target db:Pfam-A.hmm|PF13244.6 evalue:3.2e-17 score:61.7 best_domain_score:61.7 name:DUF4040; db:Pfam-A.hmm|PF04039.13 evalue:2.2e-09 score:36.9 best_domain_score:36.9 name:MnhB;
tm_num 9;
26693 25746 transmembrane_helix
ID metaerg.pl|07400
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology o25755-25811i25830-25898o25911-25970i26031-26099o26142-26195i26310-26378o26406-26474i26493-26561o26589-26657i;
27019 26690 CDS
ID metaerg.pl|07401
allgo_ids GO:0005451; GO:0015672; GO:1902600;
allko_ids K05571;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas halophila;
genomedb_acc GCF_900107165.1;
genomedb_target db:genomedb|GCF_900107165.1|WP_090413405.1 1 89 evalue:2.0e-21 qcov:81.70 identity:62.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF03334;
pfam_desc Na+/H+ antiporter subunit;
pfam_id PhaG_MnhG_YufB;
pfam_target db:Pfam-A.hmm|PF03334.14 evalue:3.7e-24 score:84.0 best_domain_score:83.8 name:PhaG_MnhG_YufB;
sprot_desc hypothetical protein;
sprot_id sp|Q52966|Y998_RHIME;
sprot_target db:uniprot_sprot|sp|Q52966|Y998_RHIME 7 92 evalue:3.4e-07 qcov:78.90 identity:34.90;
tigrfam_acc TIGR01300;
tigrfam_desc monovalent cation/proton antiporter, MnhG/PhaG subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name CPA3_mnhG_phaG;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01300 evalue:1.5e-18 score:66.1 best_domain_score:65.7 name:TIGR01300;
tm_num 2;
27019 26690 transmembrane_helix
ID metaerg.pl|07402
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i26708-26776o26876-26944i;
27285 27016 CDS
ID metaerg.pl|07403
allgo_ids GO:0015075; GO:0016021; GO:0034220;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__UBA1383;s__UBA1383 sp002305415;
genomedb_acc GCA_002305415.1;
genomedb_target db:genomedb|GCA_002305415.1|DBQX01000103.1_16 1 88 evalue:2.9e-18 qcov:98.90 identity:62.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF04066;
pfam_desc Multiple resistance and pH regulation protein F (MrpF / PhaF);
pfam_id MrpF_PhaF;
pfam_target db:Pfam-A.hmm|PF04066.13 evalue:2.4e-07 score:30.3 best_domain_score:30.3 name:MrpF_PhaF;
tm_num 3;
27285 27016 transmembrane_helix
ID metaerg.pl|07404
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology o27025-27081i27118-27186o27199-27267i;
27866 27282 CDS
ID metaerg.pl|07405
allgo_ids GO:0006812; GO:0008324; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__UBA2363;g__UBA2363;s__UBA2363 sp002344355;
genomedb_acc GCA_002344355.1;
genomedb_target db:genomedb|GCA_002344355.1|DDTN01000026.1_80 20 175 evalue:3.7e-34 qcov:80.40 identity:52.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF01899;
pfam_desc Na+/H+ ion antiporter subunit;
pfam_id MNHE;
pfam_target db:Pfam-A.hmm|PF01899.16 evalue:1.1e-27 score:95.8 best_domain_score:95.5 name:MNHE;
tm_num 2;
27866 27282 transmembrane_helix
ID metaerg.pl|07406
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i27342-27410o27420-27488i;
29316 27907 CDS
ID metaerg.pl|07407
allec_ids 2.7.8.-;
allgo_ids GO:0003824; GO:0016021; GO:0005886; GO:0008808; GO:0032049;
allko_ids K06131;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A sulfidiphilus;
genomedb_acc GCF_000021985.1;
genomedb_target db:genomedb|GCF_000021985.1|WP_012638522.1 1 469 evalue:3.1e-151 qcov:100.00 identity:58.40;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
metacyc_pathway_id TEICHOICACID-PWY; PHOSLIPSYN-PWY; PWY-6385; PWY4FS-4; PHOSLIPSYN2-PWY; PWY-5668;
metacyc_pathway_name poly(glycerol phosphate) wall teichoic acid biosynthesis;; superpathway of phospholipid biosynthesis I (bacteria);; peptidoglycan biosynthesis III (mycobacteria);; phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; cardiolipin biosynthesis I;;
metacyc_pathway_type Teichoic-Acids-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;;
pfam_acc PF00614; PF13091;
pfam_desc Phospholipase D Active site motif; PLD-like domain;
pfam_id PLDc; PLDc_2;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:9.7e-14 score:50.1 best_domain_score:24.1 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:1.2e-46 score:157.1 best_domain_score:97.4 name:PLDc_2;
sprot_desc Cardiolipin synthase;
sprot_id sp|Q9K8Z4|CLS_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K8Z4|CLS_BACHD 92 469 evalue:7.4e-51 qcov:80.60 identity:32.10;
tm_num 2;
29316 27907 transmembrane_helix
ID metaerg.pl|07408
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology o27919-27987i28006-28074o;
29449 29883 CDS
ID metaerg.pl|07409
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thiocapsa;s__Thiocapsa marina;
genomedb_acc GCF_000223985.1;
genomedb_target db:genomedb|GCF_000223985.1|WP_007193713.1 1 143 evalue:3.5e-45 qcov:99.30 identity:67.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.9e-31 score:108.7 best_domain_score:108.6 name:Usp;
30085 30762 CDS
ID metaerg.pl|07410
genomedb_OC d__Bacteria;p__Myxococcota;c__UBA9160;o__UBA9160;f__UBA9160;g__UBA9160;s__UBA9160 sp003520425;
genomedb_acc GCA_003520425.1;
genomedb_target db:genomedb|GCA_003520425.1|HBZ72199.1 10 218 evalue:5.2e-88 qcov:92.90 identity:76.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00881;
pfam_desc Nitroreductase family;
pfam_id Nitroreductase;
pfam_target db:Pfam-A.hmm|PF00881.24 evalue:3.3e-23 score:81.8 best_domain_score:81.5 name:Nitroreductase;
31573 30770 CDS
ID metaerg.pl|07411
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000033.1_10 1 242 evalue:1.5e-97 qcov:90.60 identity:79.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF01145;
pfam_desc SPFH domain / Band 7 family;
pfam_id Band_7;
pfam_target db:Pfam-A.hmm|PF01145.25 evalue:9.1e-33 score:113.0 best_domain_score:112.6 name:Band_7;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|O28852|Y1420_ARCFU;
sprot_target db:uniprot_sprot|sp|O28852|Y1420_ARCFU 8 243 evalue:2.7e-66 qcov:88.40 identity:57.20;
tm_num 1;
30770 30826 signal_peptide
ID metaerg.pl|07412
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
31573 30770 transmembrane_helix
ID metaerg.pl|07413
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i30773-30841o;
33153 31636 CDS
ID metaerg.pl|07414
allec_ids 3.4.21.-;
allgo_ids GO:0016021; GO:0008236;
allko_ids K07403;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000312.1_14 60 497 evalue:2.9e-139 qcov:86.70 identity:61.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF01957;
pfam_desc NfeD-like C-terminal, partner-binding;
pfam_id NfeD;
pfam_target db:Pfam-A.hmm|PF01957.18 evalue:2.5e-16 score:59.0 best_domain_score:57.3 name:NfeD;
sp YES;
sprot_desc Membrane-bound protease PH1510;
sprot_id sp|O59179|STOPP_PYRHO;
sprot_target db:uniprot_sprot|sp|O59179|STOPP_PYRHO 70 494 evalue:9.5e-44 qcov:84.20 identity:30.60;
tm_num 5;
31636 31749 signal_peptide
ID metaerg.pl|07415
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
33153 31636 transmembrane_helix
ID metaerg.pl|07416
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology o31678-31746i32536-32604o32632-32736i32755-32823o32851-32919i;
34150 33173 CDS
ID metaerg.pl|07417
allec_ids 1.1.1.95;
allgo_ids GO:0051287; GO:0055114; GO:0004617; GO:0006520; GO:0006564;
allko_ids K00018; K00058;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Palsa-881;s__Palsa-881 sp003161535;
genomedb_acc GCA_003161535.1;
genomedb_target db:genomedb|GCA_003161535.1|PMOM01000042.1_7 2 319 evalue:4.1e-70 qcov:97.80 identity:46.40;
kegg_pathway_id 00630; 00260;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
metacyc_pathway_id SER-GLYSYN-PWY; SERSYN-PWY; SULFATE-CYS-PWY;
metacyc_pathway_name superpathway of L-serine and glycine biosynthesis I;; L-serine biosynthesis I;; superpathway of sulfate assimilation and cysteine biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; SERINE-BIOSYNTHESIS;; Sulfur-Metabolism; Super-Pathways;;
pfam_acc PF02826; PF03446;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id 2-Hacid_dh_C; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:1.2e-47 score:160.8 best_domain_score:160.5 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF03446.15 evalue:2.4e-05 score:23.8 best_domain_score:22.2 name:NAD_binding_2;
sprot_desc D-3-phosphoglycerate dehydrogenase;
sprot_id sp|Q58424|SERA_METJA;
sprot_target db:uniprot_sprot|sp|Q58424|SERA_METJA 72 306 evalue:1.7e-22 qcov:72.30 identity:33.30;
34920 34234 CDS
ID metaerg.pl|07418
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__UBA5105;s__UBA5105 sp002692965;
genomedb_acc GCA_002692965.1;
genomedb_target db:genomedb|GCA_002692965.1|MAL96405.1 1 225 evalue:2.7e-52 qcov:98.70 identity:54.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF10294; PF05175; PF06325;
pfam_desc Lysine methyltransferase; Methyltransferase small domain; Ribosomal protein L11 methyltransferase (PrmA);
pfam_id Methyltransf_16; MTS; PrmA;
pfam_target db:Pfam-A.hmm|PF10294.9 evalue:1.2e-09 score:37.3 best_domain_score:34.8 name:Methyltransf_16; db:Pfam-A.hmm|PF05175.14 evalue:1.3e-05 score:24.0 best_domain_score:23.5 name:MTS; db:Pfam-A.hmm|PF06325.13 evalue:4.2e-12 score:45.3 best_domain_score:44.9 name:PrmA;
35102 36448 CDS
ID metaerg.pl|07419
allec_ids 3.4.17.-;
allgo_ids GO:0016787; GO:0004180; GO:0046872; GO:0008237;
allko_ids K13048;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__Pseudohongiella;s__Pseudohongiella acticola;
genomedb_acc GCF_001758195.1;
genomedb_target db:genomedb|GCF_001758195.1|WP_070118116.1 21 447 evalue:2.8e-173 qcov:95.30 identity:72.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:1.6e-12 score:46.5 best_domain_score:45.7 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:4e-31 score:107.6 best_domain_score:107.1 name:Peptidase_M20;
sp YES;
sprot_desc Thermostable carboxypeptidase 2;
sprot_id sp|P58156|CBPX2_SACS2;
sprot_target db:uniprot_sprot|sp|P58156|CBPX2_SACS2 42 444 evalue:7.0e-75 qcov:90.00 identity:39.20;
tigrfam_acc TIGR01891;
tigrfam_desc amidohydrolase;
tigrfam_mainrole Protein fate;
tigrfam_name amidohydrolases;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01891 evalue:1.7e-103 score:345.7 best_domain_score:345.4 name:TIGR01891;
tm_num 1;
35102 35218 signal_peptide
ID metaerg.pl|07420
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
35102 36448 transmembrane_helix
ID metaerg.pl|07421
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i35159-35218o;
36438 37970 CDS
ID metaerg.pl|07422
allec_ids 2.7.4.-; 2.7.4.1;
allgo_ids GO:0042802; GO:0016301; GO:0043751; GO:0006797;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__UBA4486;f__UBA4486;g__UBA4486;s__UBA4486 sp002389045;
genomedb_acc GCA_002389045.1;
genomedb_target db:genomedb|GCA_002389045.1|DGNS01000015.1_126 19 507 evalue:1.8e-152 qcov:95.90 identity:51.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
metacyc_pathway_id PWY-5107; PWY-6577;
metacyc_pathway_name phytol salvage pathway;; farnesylcysteine salvage pathway;;
metacyc_pathway_type DITERPENOID-SYN;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;;
pfam_acc PF03976;
pfam_desc Polyphosphate kinase 2 (PPK2);
pfam_id PPK2;
pfam_target db:Pfam-A.hmm|PF03976.14 evalue:3.3e-125 score:415.3 best_domain_score:283.2 name:PPK2;
sprot_desc Polyphosphate:AMP phosphotransferase;
sprot_id sp|Q9HYF1|PK22_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HYF1|PK22_PSEAE 19 506 evalue:1.0e-117 qcov:95.70 identity:44.90;
tigrfam_acc TIGR03707; TIGR03708; TIGR03709;
tigrfam_desc polyphosphate kinase 2; polyphosphate:AMP phosphotransferase; polyphosphate:nucleotide phosphotransferase, PPK2 family;
tigrfam_mainrole Central intermediary metabolism; Central intermediary metabolism; Central intermediary metabolism;
tigrfam_name PPK2_P_aer; poly_P_AMP_trns; PPK2_rel_1;
tigrfam_sub1role Phosphorus compounds; Phosphorus compounds; Phosphorus compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR03707 evalue:7.3e-101 score:335.8 best_domain_score:214.4 name:TIGR03707; db:TIGRFAMs.hmm|TIGR03708 evalue:6.8e-183 score:608.0 best_domain_score:607.8 name:TIGR03708; db:TIGRFAMs.hmm|TIGR03709 evalue:6.6e-92 score:306.6 best_domain_score:215.3 name:TIGR03709;
40020 38011 CDS
ID metaerg.pl|07423
allec_ids 2.1.1.77;
allgo_ids GO:0046677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Pseudolabrys;s__Pseudolabrys sp003133345;
genomedb_acc GCA_003133345.1;
genomedb_target db:genomedb|GCA_003133345.1|PKXB01000065.1_25 10 669 evalue:4.8e-238 qcov:98.70 identity:61.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF05139; PF08241; PF13649; PF13847; PF01135; PF00398;
pfam_desc Erythromycin esterase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Ribosomal RNA adenine dimethylase;
pfam_id Erythro_esteras; Methyltransf_11; Methyltransf_25; Methyltransf_31; PCMT; RrnaAD;
pfam_target db:Pfam-A.hmm|PF05139.14 evalue:1.4e-117 score:392.6 best_domain_score:392.1 name:Erythro_esteras; db:Pfam-A.hmm|PF08241.12 evalue:3.7e-06 score:26.7 best_domain_score:25.0 name:Methyltransf_11; db:Pfam-A.hmm|PF13649.6 evalue:2.3e-07 score:30.7 best_domain_score:28.9 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1e-07 score:31.1 best_domain_score:30.2 name:Methyltransf_31; db:Pfam-A.hmm|PF01135.19 evalue:1e-64 score:217.4 best_domain_score:216.8 name:PCMT; db:Pfam-A.hmm|PF00398.20 evalue:3.2e-07 score:28.9 best_domain_score:28.1 name:RrnaAD;
tigrfam_acc TIGR00080;
tigrfam_desc protein-L-isoaspartate O-methyltransferase;
tigrfam_mainrole Protein fate;
tigrfam_name pimt;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00080 evalue:3.5e-67 score:225.5 best_domain_score:224.8 name:TIGR00080;
40362 41804 CDS
ID metaerg.pl|07424
allgo_ids GO:0015501; GO:0015813; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas endophytica;
genomedb_acc GCF_002879615.1;
genomedb_target db:genomedb|GCF_002879615.1|WP_102652200.1 1 478 evalue:7.8e-142 qcov:99.60 identity:58.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF03616;
pfam_desc Sodium/glutamate symporter;
pfam_id Glt_symporter;
pfam_target db:Pfam-A.hmm|PF03616.14 evalue:1.5e-13 score:49.4 best_domain_score:42.7 name:Glt_symporter;
tm_num 11;
40362 41804 transmembrane_helix
ID metaerg.pl|07425
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology o40374-40427i40446-40514o40605-40673i40710-40778o40905-40973i41115-41174o41202-41270i41331-41399o41409-41477i41625-41684o41697-41765i;
41867 42193 CDS
ID metaerg.pl|07426
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2965;s__UBA2965 sp002348385;
genomedb_acc GCA_002348385.1;
genomedb_target db:genomedb|GCA_002348385.1|DEBD01000030.1_17 18 105 evalue:5.0e-12 qcov:81.50 identity:41.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
sp YES;
41867 41941 signal_peptide
ID metaerg.pl|07427
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
43638 42232 CDS
ID metaerg.pl|07428
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__MEBICO9517;g__MEBICO9517;s__MEBICO9517 sp003285105;
genomedb_acc GCA_003285105.1;
genomedb_target db:genomedb|GCA_003285105.1|CP030158.1_1541 10 466 evalue:8.7e-146 qcov:97.60 identity:57.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00557;
pfam_desc Metallopeptidase family M24;
pfam_id Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF00557.24 evalue:5.5e-11 score:41.8 best_domain_score:41.0 name:Peptidase_M24;
sp YES;
tm_num 1;
42232 42312 signal_peptide
ID metaerg.pl|07429
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
43638 42232 transmembrane_helix
ID metaerg.pl|07430
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i42244-42312o;
43978 45645 CDS
ID metaerg.pl|07431
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Euryhalocaulis;s__Euryhalocaulis caribicus;
genomedb_acc GCF_000412185.1;
genomedb_target db:genomedb|GCF_000412185.1|WP_081639490.1 5 554 evalue:7.9e-162 qcov:99.10 identity:51.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF05960;
pfam_desc Bacterial protein of unknown function (DUF885);
pfam_id DUF885;
pfam_target db:Pfam-A.hmm|PF05960.11 evalue:1.3e-34 score:120.0 best_domain_score:89.4 name:DUF885;
sp YES;
tm_num 1;
43978 44058 signal_peptide
ID metaerg.pl|07432
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
43978 45645 transmembrane_helix
ID metaerg.pl|07433
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i43996-44064o;
45761 47422 CDS
ID metaerg.pl|07434
allec_ids 3.1.6.4;
allgo_ids GO:0008484; GO:0005764; GO:0004065; GO:0046872; GO:0043890;
allko_ids K01132;
genomedb_OC d__Bacteria;p__Myxococcota;c__UBA9160;o__UBA9160;f__UBA4427;g__MED660;s__MED660 sp002691025;
genomedb_acc GCA_002691025.1;
genomedb_target db:genomedb|GCA_002691025.1|MAI27249.1 3 553 evalue:1.6e-194 qcov:99.60 identity:58.20;
kegg_pathway_id 01032;
kegg_pathway_name Glycan structures - degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
metacyc_pathway_id PWY-6573;
metacyc_pathway_name chondroitin sulfate degradation (metazoa);;
metacyc_pathway_type Glycan-Degradation; Glycosaminoglycan-Degradation;;
pfam_acc PF00884;
pfam_desc Sulfatase;
pfam_id Sulfatase;
pfam_target db:Pfam-A.hmm|PF00884.23 evalue:1.7e-62 score:210.8 best_domain_score:209.0 name:Sulfatase;
sprot_desc N-acetylgalactosamine-6-sulfatase;
sprot_id sp|Q32KH5|GALNS_CANLF;
sprot_target db:uniprot_sprot|sp|Q32KH5|GALNS_CANLF 53 508 evalue:1.5e-47 qcov:82.50 identity:30.40;
tm_num 1;
45761 47422 transmembrane_helix
ID metaerg.pl|07435
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i45773-45841o;
47434 48360 CDS
ID metaerg.pl|07436
allec_ids 3.8.1.5;
allgo_ids GO:0018786;
allko_ids K01563;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA11889;s__UBA11889 sp002313255;
genomedb_acc GCA_002313255.1;
genomedb_target db:genomedb|GCA_002313255.1|DCBA01000034.1_2 1 304 evalue:6.4e-129 qcov:98.70 identity:67.10;
kegg_pathway_id 00626; 00641; 00361; 00631;
kegg_pathway_name Naphthalene and anthracene degradation; 3-Chloroacrylic acid degradation; gamma-Hexachlorocyclohexane degradation; 1,2-Dichloroethane degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
metacyc_pathway_id 12DICHLORETHDEG-PWY; GAMMAHEXCHLORDEG-PWY;
metacyc_pathway_name 1,2-dichloroethane degradation;; γ-hexachlorocyclohexane degradation;;
metacyc_pathway_type CHLORINATED-COMPOUNDS-DEG;; CHLORINATED-COMPOUNDS-DEG;;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:1.1e-22 score:80.2 best_domain_score:71.8 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:5.1e-14 score:52.6 best_domain_score:52.6 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:1e-13 score:50.4 best_domain_score:49.2 name:Hydrolase_4;
sprot_desc Haloalkane dehalogenase;
sprot_id sp|B4RF90|DHMA_PHEZH;
sprot_target db:uniprot_sprot|sp|B4RF90|DHMA_PHEZH 4 304 evalue:1.6e-49 qcov:97.70 identity:39.80;
48357 49427 CDS
ID metaerg.pl|07437
allec_ids 3.1.26.11;
allgo_ids GO:0042781; GO:0008270;
allko_ids K00784;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000026.1_16 1 351 evalue:7.2e-108 qcov:98.60 identity:58.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00753; PF12706;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:2.4e-16 score:59.6 best_domain_score:59.6 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:4.8e-20 score:71.2 best_domain_score:70.5 name:Lactamase_B_2;
sp YES;
sprot_desc Ribonuclease Z;
sprot_id sp|B2GBD1|RNZ_LACF3;
sprot_target db:uniprot_sprot|sp|B2GBD1|RNZ_LACF3 56 307 evalue:1.0e-12 qcov:70.80 identity:28.20;
48357 48425 signal_peptide
ID metaerg.pl|07438
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
49439 50059 CDS
ID metaerg.pl|07439
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Parvibaculaceae;g__Tepidicaulis;s__Tepidicaulis marinus;
genomedb_acc GCF_000739695.1;
genomedb_target db:genomedb|GCF_000739695.1|WP_045448297.1 2 200 evalue:6.7e-50 qcov:96.60 identity:56.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00440;
pfam_desc Bacterial regulatory proteins, tetR family;
pfam_id TetR_N;
pfam_target db:Pfam-A.hmm|PF00440.23 evalue:4.9e-08 score:31.9 best_domain_score:30.6 name:TetR_N;
50056 51852 CDS
ID metaerg.pl|07440
allec_ids 3.1.6.1;
allgo_ids GO:0003824; GO:0005737; GO:0004065; GO:0046872; GO:0008081;
allko_ids K01130;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Parvibaculaceae;g__Tepidicaulis;s__Tepidicaulis marinus;
genomedb_acc GCF_000739695.1;
genomedb_target db:genomedb|GCF_000739695.1|WP_052379473.1 9 585 evalue:1.3e-218 qcov:96.50 identity:63.80;
kegg_pathway_id 00150;
kegg_pathway_name Androgen and estrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF01663; PF00884;
pfam_desc Type I phosphodiesterase / nucleotide pyrophosphatase; Sulfatase;
pfam_id Phosphodiest; Sulfatase;
pfam_target db:Pfam-A.hmm|PF01663.22 evalue:1.2e-05 score:24.3 best_domain_score:18.7 name:Phosphodiest; db:Pfam-A.hmm|PF00884.23 evalue:1.3e-67 score:227.6 best_domain_score:227.2 name:Sulfatase;
sp YES;
sprot_desc Arylsulfatase;
sprot_id sp|P51691|ARS_PSEAE;
sprot_target db:uniprot_sprot|sp|P51691|ARS_PSEAE 28 546 evalue:8.7e-105 qcov:86.80 identity:40.40;
tm_num 2;
50056 50130 signal_peptide
ID metaerg.pl|07441
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
50056 51852 transmembrane_helix
ID metaerg.pl|07442
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i50068-50136o51760-51828i;
51876 52907 CDS
ID metaerg.pl|07443
allgo_ids GO:0005515;
allko_ids K00799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__GCA-002726655;s__GCA-002726655 sp002726655;
genomedb_acc GCA_002726655.1;
genomedb_target db:genomedb|GCA_002726655.1|MBQ76101.1 1 342 evalue:3.9e-127 qcov:99.70 identity:66.80;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00043; PF13410; PF14497; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_2; GST_C_3; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:4.1e-05 score:22.9 best_domain_score:21.6 name:GST_C; db:Pfam-A.hmm|PF13410.6 evalue:5.8e-13 score:47.9 best_domain_score:46.4 name:GST_C_2; db:Pfam-A.hmm|PF14497.6 evalue:5.4e-05 score:22.5 best_domain_score:21.4 name:GST_C_3; db:Pfam-A.hmm|PF13417.6 evalue:2e-05 score:24.2 best_domain_score:22.2 name:GST_N_3;
54102 52894 CDS
ID metaerg.pl|07444
allgo_ids GO:0016021; GO:0005886;
allko_ids K07148;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Marinobacter;s__Marinobacter sp002726615;
genomedb_acc GCA_002726615.1;
genomedb_target db:genomedb|GCA_002726615.1|MBP54931.1 6 387 evalue:6.6e-102 qcov:95.00 identity:55.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF04235;
pfam_desc Protein of unknown function (DUF418);
pfam_id DUF418;
pfam_target db:Pfam-A.hmm|PF04235.12 evalue:1.2e-40 score:138.3 best_domain_score:138.3 name:DUF418;
sprot_desc hypothetical protein;
sprot_id sp|P42107|YXAH_BACSU;
sprot_target db:uniprot_sprot|sp|P42107|YXAH_BACSU 6 376 evalue:2.2e-27 qcov:92.30 identity:32.80;
tm_num 8;
54102 52894 transmembrane_helix
ID metaerg.pl|07445
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i52930-52998o53086-53145i53182-53250o53293-53361i53596-53664o53707-53775i53833-53901o53914-53982i;
54311 55318 CDS
ID metaerg.pl|07446
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Tamilnaduibacter;s__Tamilnaduibacter nanhaiticus;
genomedb_acc GCF_000364845.1;
genomedb_target db:genomedb|GCF_000364845.1|WP_004580317.1 1 331 evalue:9.8e-99 qcov:98.80 identity:55.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF13354;
pfam_desc Beta-lactamase enzyme family;
pfam_id Beta-lactamase2;
pfam_target db:Pfam-A.hmm|PF13354.6 evalue:6.2e-45 score:152.5 best_domain_score:151.7 name:Beta-lactamase2;
sp YES;
54311 54352 signal_peptide
ID metaerg.pl|07447
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
55473 56261 CDS
ID metaerg.pl|07448
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Bryobacterales;f__Bryobacteraceae;g__UBA690;s__UBA690 sp003487005;
genomedb_acc GCA_003487005.1;
genomedb_target db:genomedb|GCA_003487005.1|HAX44756.1 14 253 evalue:5.2e-23 qcov:91.60 identity:38.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF07589;
pfam_desc PEP-CTERM motif;
pfam_id PEP-CTERM;
pfam_target db:Pfam-A.hmm|PF07589.11 evalue:3e-07 score:29.5 best_domain_score:29.5 name:PEP-CTERM;
sp YES;
tigrfam_acc TIGR02595;
tigrfam_desc PEP-CTERM protein-sorting domain;
tigrfam_mainrole Cell envelope;
tigrfam_name PEP_exosort;
tigrfam_sub1role Surface structures;
tigrfam_target db:TIGRFAMs.hmm|TIGR02595 evalue:1e-05 score:25.2 best_domain_score:24.6 name:TIGR02595;
tm_num 1;
55473 55553 signal_peptide
ID metaerg.pl|07449
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
55473 56261 transmembrane_helix
ID metaerg.pl|07450
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i55491-55559o;
56619 58544 CDS
ID metaerg.pl|07451
allgo_ids GO:0009306; GO:0009279; GO:0016021; GO:0015627; GO:0042802; GO:0015628;
allko_ids K02453;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA11889;s__UBA11889 sp002715785;
genomedb_acc GCA_002715785.1;
genomedb_target db:genomedb|GCA_002715785.1|MBG71764.1 32 634 evalue:8.0e-166 qcov:94.10 identity:52.30;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00263; PF03958;
pfam_desc Bacterial type II and III secretion system protein; Bacterial type II/III secretion system short domain;
pfam_id Secretin; Secretin_N;
pfam_target db:Pfam-A.hmm|PF00263.21 evalue:9e-50 score:167.9 best_domain_score:167.0 name:Secretin; db:Pfam-A.hmm|PF03958.17 evalue:9e-37 score:124.6 best_domain_score:54.3 name:Secretin_N;
sp YES;
sprot_desc Secretin XcpQ;
sprot_id sp|P35818|GSPD_PSEAE;
sprot_target db:uniprot_sprot|sp|P35818|GSPD_PSEAE 10 632 evalue:5.4e-121 qcov:97.20 identity:41.70;
tigrfam_acc TIGR02517;
tigrfam_desc type II secretion system protein D;
tigrfam_mainrole Protein fate;
tigrfam_name type_II_gspD;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02517 evalue:9.1e-153 score:509.0 best_domain_score:502.7 name:TIGR02517;
56619 56687 signal_peptide
ID metaerg.pl|07452
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
59239 60042 CDS
ID metaerg.pl|07453
allec_ids 3.-.-.-;
allgo_ids GO:0016788; GO:0005739; GO:0016787;
allko_ids K13703;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Halorhodospiraceae;g__Alkalilimnicola;s__Alkalilimnicola ehrlichii;
genomedb_acc GCF_000014785.1;
genomedb_target db:genomedb|GCF_000014785.1|WP_011630514.1 1 264 evalue:1.9e-92 qcov:98.90 identity:64.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00561; PF12697; PF12146; PF07819;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33; PGAP1-like protein;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4; PGAP1;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:9.2e-28 score:96.8 best_domain_score:93.1 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:1.5e-21 score:77.3 best_domain_score:77.0 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:5.4e-11 score:41.4 best_domain_score:39.7 name:Hydrolase_4; db:Pfam-A.hmm|PF07819.13 evalue:4.5e-06 score:25.8 best_domain_score:16.4 name:PGAP1;
sprot_desc hypothetical protein;
sprot_id sp|Q8NFV4|ABHDB_HUMAN;
sprot_target db:uniprot_sprot|sp|Q8NFV4|ABHDB_HUMAN 18 262 evalue:5.5e-43 qcov:91.80 identity:40.20;
60723 60097 CDS
ID metaerg.pl|07454
allec_ids 2.5.1.18;
allgo_ids GO:0005515; GO:0005737; GO:0005783; GO:0043295; GO:0004602; GO:0004364; GO:0006749; GO:0019430;
allko_ids K00799; K04097;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Congregibacter;s__Congregibacter litoralis;
genomedb_acc GCF_000153125.2;
genomedb_target db:genomedb|GCF_000153125.2|WP_008294787.1 1 208 evalue:8.8e-90 qcov:100.00 identity:77.40;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
metacyc_pathway_id PWY-4061;
metacyc_pathway_name glutathione-mediated detoxification I;;
metacyc_pathway_type Detoxification; Other-Degradation;;
pfam_acc PF00043; PF14497; PF02798; PF13409; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_3; GST_N; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:9.5e-07 score:28.2 best_domain_score:27.6 name:GST_C; db:Pfam-A.hmm|PF14497.6 evalue:2.1e-07 score:30.3 best_domain_score:29.7 name:GST_C_3; db:Pfam-A.hmm|PF02798.20 evalue:3.7e-16 score:58.5 best_domain_score:57.7 name:GST_N; db:Pfam-A.hmm|PF13409.6 evalue:9.3e-09 score:34.7 best_domain_score:34.0 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:1.4e-13 score:50.3 best_domain_score:49.5 name:GST_N_3;
sprot_desc Glutathione S-transferase 3;
sprot_id sp|Q9P6M1|GST3_SCHPO;
sprot_target db:uniprot_sprot|sp|Q9P6M1|GST3_SCHPO 1 200 evalue:2.8e-26 qcov:96.20 identity:35.30;
61186 60782 CDS
ID metaerg.pl|07455
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA4421;s__UBA4421 sp003230835;
genomedb_acc GCA_003230835.1;
genomedb_target db:genomedb|GCA_003230835.1|QIGT01000441.1_3 8 126 evalue:3.1e-40 qcov:88.80 identity:68.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF07681; PF02077;
pfam_desc DoxX; SURF4 family;
pfam_id DoxX; SURF4;
pfam_target db:Pfam-A.hmm|PF07681.12 evalue:1.8e-11 score:43.7 best_domain_score:43.7 name:DoxX; db:Pfam-A.hmm|PF02077.15 evalue:7.2e-07 score:28.3 best_domain_score:27.9 name:SURF4;
tm_num 2;
61186 60782 transmembrane_helix
ID metaerg.pl|07456
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i60815-60883o60926-60994i;
63425 61266 CDS
ID metaerg.pl|07457
allec_ids 3.4.15.5;
allgo_ids GO:0004222; GO:0006508; GO:0005829; GO:0030288; GO:0004180; GO:0046872; GO:0008237;
allko_ids K01284;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL36911.1 1 715 evalue:7.1e-264 qcov:99.40 identity:63.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF01432;
pfam_desc Peptidase family M3;
pfam_id Peptidase_M3;
pfam_target db:Pfam-A.hmm|PF01432.20 evalue:1.8e-113 score:379.5 best_domain_score:379.1 name:Peptidase_M3;
sp YES;
sprot_desc Dipeptidyl carboxypeptidase;
sprot_id sp|P27236|DCP_SALTY;
sprot_target db:uniprot_sprot|sp|P27236|DCP_SALTY 37 717 evalue:2.3e-168 qcov:94.70 identity:45.00;
61266 61316 lipoprotein_signal_peptide
ID metaerg.pl|07458
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
63631 65460 CDS
ID metaerg.pl|07459
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Emcibacteraceae;g__UBA4149;s__UBA4149 sp002380195;
genomedb_acc GCA_002380195.1;
genomedb_target db:genomedb|GCA_002380195.1|DFVX01000062.1_51 14 603 evalue:2.7e-203 qcov:96.90 identity:59.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF05960;
pfam_desc Bacterial protein of unknown function (DUF885);
pfam_id DUF885;
pfam_target db:Pfam-A.hmm|PF05960.11 evalue:1.1e-176 score:588.8 best_domain_score:588.6 name:DUF885;
sp YES;
63631 63696 lipoprotein_signal_peptide
ID metaerg.pl|07460
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
65673 68153 CDS
ID metaerg.pl|07461
allgo_ids GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Nitrococcaceae;g__E85;s__E85 sp003149435;
genomedb_acc GCF_003149435.1;
genomedb_target db:genomedb|GCF_003149435.1|WP_109675473.1 5 799 evalue:6.8e-178 qcov:96.20 identity:46.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF12607; PF00924;
pfam_desc Protein of unknown function (DUF3772); Mechanosensitive ion channel;
pfam_id DUF3772; MS_channel;
pfam_target db:Pfam-A.hmm|PF12607.8 evalue:2.6e-08 score:32.7 best_domain_score:32.2 name:DUF3772; db:Pfam-A.hmm|PF00924.18 evalue:4.9e-53 score:179.0 best_domain_score:179.0 name:MS_channel;
sp YES;
tm_num 10;
65673 65735 signal_peptide
ID metaerg.pl|07462
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
65673 68153 transmembrane_helix
ID metaerg.pl|07463
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology o66267-66335i66396-66464o66477-66545i66636-66704o66714-66782i66927-66995o67005-67073i67191-67259o67302-67370i67431-67499o;
68934 68161 CDS
ID metaerg.pl|07464
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax_A;s__Alcanivorax_A sp003259185;
genomedb_acc GCF_003259185.1;
genomedb_target db:genomedb|GCF_003259185.1|WP_111655752.1 38 252 evalue:5.6e-62 qcov:83.70 identity:57.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
sp YES;
tm_num 1;
68161 68259 signal_peptide
ID metaerg.pl|07465
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
68934 68161 transmembrane_helix
ID metaerg.pl|07466
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i68194-68253o;
69557 68970 CDS
ID metaerg.pl|07467
allgo_ids GO:0051920; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius aestuarii;
genomedb_acc GCF_900172285.1;
genomedb_target db:genomedb|GCF_900172285.1|WP_085800780.1 1 190 evalue:4.2e-78 qcov:97.40 identity:77.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF02627;
pfam_desc Carboxymuconolactone decarboxylase family;
pfam_id CMD;
pfam_target db:Pfam-A.hmm|PF02627.20 evalue:2.4e-12 score:46.0 best_domain_score:39.6 name:CMD;
tigrfam_acc TIGR00778; TIGR01926;
tigrfam_desc alkylhydroperoxidase AhpD family core domain; uncharacterized peroxidase-related enzyme;
tigrfam_mainrole Unknown function;
tigrfam_name ahpD_dom; peroxid_rel;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00778 evalue:5.8e-11 score:40.9 best_domain_score:37.8 name:TIGR00778; db:TIGRFAMs.hmm|TIGR01926 evalue:1.9e-63 score:212.6 best_domain_score:212.5 name:TIGR01926;
69579 70526 CDS
ID metaerg.pl|07468
allgo_ids GO:0004181; GO:0006508; GO:0008270;
genomedb_OC d__Bacteria;p__Myxococcota;c__Polyangia;o__Nannocystales;f__Nannocystaceae;g__Nannocystis;s__Nannocystis exedens;
genomedb_acc GCF_002343915.1;
genomedb_target db:genomedb|GCF_002343915.1|WP_096333191.1 2 297 evalue:1.8e-78 qcov:94.00 identity:53.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00246;
pfam_desc Zinc carboxypeptidase;
pfam_id Peptidase_M14;
pfam_target db:Pfam-A.hmm|PF00246.24 evalue:1.4e-27 score:96.5 best_domain_score:96.0 name:Peptidase_M14;
70693 71223 CDS
ID metaerg.pl|07469
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035987019.1 7 175 evalue:1.5e-61 qcov:96.00 identity:68.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
71252 73225 CDS
ID metaerg.pl|07470
allec_ids 2.7.13.3;
allgo_ids GO:0006355; GO:0016021; GO:0005886; GO:0000155; GO:0004673; GO:0018106; GO:0000160;
allko_ids K11356; K04486; K11640; K02484; K07642; K11711; K02491; K13490; K01090; K07643; K11231; K07704; K10909; K01937; K08282; K07708; K07645; K07677; K07652; K13598; K07641; K07646; K08475; K07639; K07673; K01120; K03407; K07637; K07654; K00936; K07682; K07649; K07777; K07651; K07718; K07698; K07679; K02478; K07648; K00873; K07711; K13533; K11328; K07778; K11354; K07683; K11633; K07768; K02575; K07644; K07709; K13532; K06379; K10681; K07676; K01769; K07675; K07717; K07680; K07647; K10942; K13040; K11617; K04757; K11629; K10125; K02342; K02476; K11357; K12767; K02486; K11383; K14509; K11520; K07769; K07640; K07710; K07656; K01768; K07697; K02489; K07716; K11614; K08479; K07674; K10916; K02668; K03388; K10715; K07678; K11527; K02030; K13587; K07701; K07638; K07653; K07636; K02482; K08801; K14489; K02480;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Bryobacterales;f__Bryobacteraceae;g__PALSA-129;s__PALSA-129 sp003167255;
genomedb_acc GCA_003167255.1;
genomedb_target db:genomedb|GCA_003167255.1|PMTR01000199.1_2 150 651 evalue:6.8e-96 qcov:76.40 identity:42.70;
kegg_pathway_id 00240; 03030; 05111; 00230; 00710; 00010; 00340; 00790; 00620; 03090; 02020; 04011;
kegg_pathway_name Pyrimidine metabolism; DNA replication; Vibrio cholerae pathogenic cycle; Purine metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Histidine metabolism; Folate biosynthesis; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF02518; PF00989; PF13596; PF08447; PF08448; PF13188; PF13426; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; PAS domain; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id HATPase_c; PAS; PAS_10; PAS_3; PAS_4; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:8.5e-19 score:67.4 best_domain_score:66.7 name:HATPase_c; db:Pfam-A.hmm|PF00989.25 evalue:2.9e-18 score:65.2 best_domain_score:62.1 name:PAS; db:Pfam-A.hmm|PF13596.6 evalue:3.2e-06 score:26.9 best_domain_score:26.1 name:PAS_10; db:Pfam-A.hmm|PF08447.12 evalue:2.8e-10 score:39.6 best_domain_score:38.6 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:1.4e-14 score:53.5 best_domain_score:52.0 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:1.4e-05 score:24.2 best_domain_score:22.2 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:6.3e-18 score:64.2 best_domain_score:61.7 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:7.4e-18 score:64.0 best_domain_score:63.0 name:Response_reg;
sprot_desc Sensor kinase CckA;
sprot_id sp|P0DOA0|CCKA_BRUA2;
sprot_target db:uniprot_sprot|sp|P0DOA0|CCKA_BRUA2 152 645 evalue:2.2e-77 qcov:75.20 identity:38.70;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:5.2e-25 score:87.1 best_domain_score:84.2 name:TIGR00229;
73566 73222 CDS
ID metaerg.pl|07471
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_043739884.1 1 114 evalue:1.2e-53 qcov:100.00 identity:79.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
73969 73640 CDS
ID metaerg.pl|07472
allgo_ids GO:0003700; GO:0006355;
casgene_acc COG0640_csa3_CAS-I-A;
casgene_name csa3;
casgene_target db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:2.5e-13 score:49.6 best_domain_score:49.3 name:csa3;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Halorhodospiraceae;g__Alkalilimnicola;s__Alkalilimnicola ehrlichii;
genomedb_acc GCF_000014785.1;
genomedb_target db:genomedb|GCF_000014785.1|WP_011629516.1 8 109 evalue:1.3e-28 qcov:93.60 identity:66.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF12840; PF01022;
pfam_desc Helix-turn-helix domain; Bacterial regulatory protein, arsR family;
pfam_id HTH_20; HTH_5;
pfam_target db:Pfam-A.hmm|PF12840.7 evalue:4.3e-08 score:32.3 best_domain_score:30.9 name:HTH_20; db:Pfam-A.hmm|PF01022.20 evalue:4e-06 score:25.8 best_domain_score:19.7 name:HTH_5;
74091 74978 CDS
ID metaerg.pl|07473
allec_ids 1.1.1.393;
allgo_ids GO:0016491; GO:0006694;
allko_ids K05711; K12420; K22607;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Halorhodospiraceae;g__Halorhodospira;s__Halorhodospira halochloris;
genomedb_acc GCF_002356555.2;
genomedb_target db:genomedb|GCF_002356555.2|WP_096409084.1 11 295 evalue:1.1e-101 qcov:96.60 identity:69.70;
kegg_pathway_id 00360;
kegg_pathway_name Phenylalanine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:9.9e-51 score:171.2 best_domain_score:170.8 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:7.1e-55 score:185.3 best_domain_score:185.0 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:2.2e-09 score:36.7 best_domain_score:36.3 name:KR;
sp YES;
sprot_desc 3-beta-hydroxycholanate 3-dehydrogenase (NADP(+));
sprot_id sp|A7AZH2|3BHDP_RUMGV;
sprot_target db:uniprot_sprot|sp|A7AZH2|3BHDP_RUMGV 46 291 evalue:9.8e-33 qcov:83.40 identity:35.20;
tm_num 1;
74091 74207 signal_peptide
ID metaerg.pl|07474
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
74091 74978 transmembrane_helix
ID metaerg.pl|07475
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i74139-74207o;
76709 75273 CDS
ID metaerg.pl|07476
allgo_ids GO:0005515;
allko_ids K01090; K01802; K08884; K05864; K09571; K01768;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000081.1_11 21 460 evalue:2.4e-82 qcov:92.10 identity:38.20;
kegg_pathway_id 00230; 04020; 05012;
kegg_pathway_name Purine metabolism; Calcium signaling pathway; Parkinson's disease;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF12895; PF12862; PF00515; PF13424; PF13428; PF14559; PF07719; PF13174; PF13176; PF13181;
pfam_desc Anaphase-promoting complex, cyclosome, subunit 3; Anaphase-promoting complex subunit 5; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id ANAPC3; ANAPC5; TPR_1; TPR_12; TPR_14; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8;
pfam_target db:Pfam-A.hmm|PF12895.7 evalue:6.2e-12 score:44.8 best_domain_score:28.2 name:ANAPC3; db:Pfam-A.hmm|PF12862.7 evalue:5.5e-06 score:25.6 best_domain_score:20.0 name:ANAPC5; db:Pfam-A.hmm|PF00515.28 evalue:2.8e-20 score:70.5 best_domain_score:18.3 name:TPR_1; db:Pfam-A.hmm|PF13424.6 evalue:7.5e-12 score:44.6 best_domain_score:26.1 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:3.3e-07 score:29.8 best_domain_score:10.8 name:TPR_14; db:Pfam-A.hmm|PF14559.6 evalue:9.4e-13 score:47.7 best_domain_score:15.7 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:3e-19 score:66.8 best_domain_score:20.1 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:1.3e-06 score:28.0 best_domain_score:8.0 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:4.8e-13 score:47.4 best_domain_score:11.8 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:2.2e-15 score:54.8 best_domain_score:14.5 name:TPR_8;
sp YES;
75273 75392 signal_peptide
ID metaerg.pl|07477
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
77362 76817 CDS
ID metaerg.pl|07478
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000057.1_11 1 175 evalue:8.8e-62 qcov:96.70 identity:69.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF03551; PF10400;
pfam_desc Transcriptional regulator PadR-like family; Virulence activator alpha C-term;
pfam_id PadR; Vir_act_alpha_C;
pfam_target db:Pfam-A.hmm|PF03551.14 evalue:5.1e-11 score:41.6 best_domain_score:40.8 name:PadR; db:Pfam-A.hmm|PF10400.9 evalue:4.6e-19 score:68.1 best_domain_score:66.4 name:Vir_act_alpha_C;
77483 78460 CDS
ID metaerg.pl|07479
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__IMCC3088;s__IMCC3088 sp000204315;
genomedb_acc GCF_000204315.1;
genomedb_target db:genomedb|GCF_000204315.1|WP_009574907.1 1 321 evalue:5.7e-144 qcov:98.80 identity:79.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF01070; PF03060;
pfam_desc FMN-dependent dehydrogenase; Nitronate monooxygenase;
pfam_id FMN_dh; NMO;
pfam_target db:Pfam-A.hmm|PF01070.18 evalue:1.8e-06 score:26.4 best_domain_score:25.7 name:FMN_dh; db:Pfam-A.hmm|PF03060.15 evalue:6.2e-19 score:67.8 best_domain_score:63.6 name:NMO;
78574 80121 CDS
ID metaerg.pl|07480
allec_ids 2.2.1.6;
allgo_ids GO:0003824; GO:0030976; GO:0005618; GO:0005576; GO:0005886; GO:0003984; GO:0046872; GO:0009097; GO:0009099;
allko_ids K01652; K01576;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000082.1_32 1 515 evalue:1.1e-170 qcov:100.00 identity:61.70;
kegg_pathway_id 00362; 00622; 00290; 00660; 00650; 00770;
kegg_pathway_name Benzoate degradation via hydroxylation; Toluene and xylene degradation; Valine, leucine and isoleucine biosynthesis; C5-Branched dibasic acid metabolism; Butanoate metabolism; Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
metacyc_pathway_id BRANCHED-CHAIN-AA-SYN-PWY; PWY-6389; PWY-5104; PWY-6396; PWY-5103; PWY-5939; ILEUSYN-PWY; VALSYN-PWY; PWY-5101; PWY-5938; THREOCAT-PWY; PWY-3001;
metacyc_pathway_name superpathway of branched chain amino acid biosynthesis;; pyruvate fermentation to (S)-acetoin;; L-isoleucine biosynthesis IV;; superpathway of 2,3-butanediol biosynthesis;; L-isoleucine biosynthesis III;; pyruvate fermentation to (R)-acetoin II;; L-isoleucine biosynthesis I (from threonine);; L-valine biosynthesis;; L-isoleucine biosynthesis II;; pyruvate fermentation to (R)-acetoin I;; superpathway of L-threonine metabolism;; superpathway of L-isoleucine biosynthesis I;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; Butanediol-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN; Super-Pathways;;
pfam_acc PF02775; PF02776;
pfam_desc Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain;
pfam_id TPP_enzyme_C; TPP_enzyme_N;
pfam_target db:Pfam-A.hmm|PF02775.21 evalue:5.5e-25 score:87.2 best_domain_score:87.2 name:TPP_enzyme_C; db:Pfam-A.hmm|PF02776.18 evalue:1.5e-34 score:118.3 best_domain_score:117.3 name:TPP_enzyme_N;
sprot_desc Putative acetolactate synthase large subunit IlvX;
sprot_id sp|O53554|ILVX_MYCTU;
sprot_target db:uniprot_sprot|sp|O53554|ILVX_MYCTU 1 515 evalue:6.3e-120 qcov:100.00 identity:48.60;
80263 80985 CDS
ID metaerg.pl|07481
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
sp YES;
80263 80340 signal_peptide
ID metaerg.pl|07482
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
82306 81002 CDS
ID metaerg.pl|07483
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000034.1_6 9 418 evalue:3.4e-75 qcov:94.50 identity:43.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00364; PF13533; PF13437; PF16576;
pfam_desc Biotin-requiring enzyme; Biotin-lipoyl like; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl; Biotin_lipoyl_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:4e-05 score:22.6 best_domain_score:11.1 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:2.4e-12 score:45.7 best_domain_score:26.9 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:3.8e-12 score:46.1 best_domain_score:28.3 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:4.9e-08 score:31.7 best_domain_score:24.3 name:HlyD_D23;
sp YES;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:1.5e-31 score:108.7 best_domain_score:65.7 name:TIGR01730;
tm_num 1;
81002 81088 signal_peptide
ID metaerg.pl|07484
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
82306 81002 transmembrane_helix
ID metaerg.pl|07485
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i81038-81106o;
85488 82303 CDS
ID metaerg.pl|07486
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886;
allko_ids K07789;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000034.1_5 18 1043 evalue:0.0e+00 qcov:96.70 identity:57.50;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF00873; PF03176; PF02355;
pfam_desc AcrB/AcrD/AcrF family; MMPL family; Protein export membrane protein;
pfam_id ACR_tran; MMPL; SecD_SecF;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:2.1e-140 score:468.6 best_domain_score:468.4 name:ACR_tran; db:Pfam-A.hmm|PF03176.15 evalue:2.5e-07 score:29.2 best_domain_score:29.2 name:MMPL; db:Pfam-A.hmm|PF02355.16 evalue:7.6e-06 score:24.7 best_domain_score:21.6 name:SecD_SecF;
sprot_desc Multidrug resistance protein MdtC;
sprot_id sp|A7ZNP9|MDTC_ECO24;
sprot_target db:uniprot_sprot|sp|A7ZNP9|MDTC_ECO24 21 1037 evalue:2.3e-47 qcov:95.90 identity:22.10;
tm_num 12;
85488 82303 transmembrane_helix
ID metaerg.pl|07487
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i82363-82431o83317-83385i83398-83466o83476-83544i83620-83688o83701-83769i83896-83964o84919-84987i85006-85074o85087-85155i85213-85281o85294-85395i;
85861 87588 CDS
ID metaerg.pl|07488
allgo_ids GO:0006812; GO:0015299; GO:0016021; GO:0055085; GO:0005887; GO:0050660; GO:0015386; GO:0006884;
allko_ids K11105;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azoarcus_C;s__Azoarcus_C communis_A;
genomedb_acc GCF_003111645.1;
genomedb_target db:genomedb|GCF_003111645.1|WP_108948828.1 1 575 evalue:2.8e-154 qcov:100.00 identity:56.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF03471; PF00999;
pfam_desc Transporter associated domain; Sodium/hydrogen exchanger family;
pfam_id CorC_HlyC; Na_H_Exchanger;
pfam_target db:Pfam-A.hmm|PF03471.17 evalue:1.2e-07 score:30.9 best_domain_score:30.1 name:CorC_HlyC; db:Pfam-A.hmm|PF00999.21 evalue:5.7e-46 score:156.3 best_domain_score:155.9 name:Na_H_Exchanger;
sprot_desc K(+)/H(+) antiporter NhaP2;
sprot_id sp|Q9HUE8|NHAP2_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HUE8|NHAP2_PSEAE 5 575 evalue:2.2e-121 qcov:99.30 identity:47.00;
tm_num 11;
85861 87588 transmembrane_helix
ID metaerg.pl|07489
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i85879-85938o86008-86076i86113-86181o86209-86277i86335-86394o86422-86490i86527-86631o86659-86727i86761-86829o86857-86925i86944-87012o;
88767 87595 CDS
ID metaerg.pl|07490
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__Pseudohongiella;s__Pseudohongiella sp002706685;
genomedb_acc GCA_002706685.1;
genomedb_target db:genomedb|GCA_002706685.1|MAY56715.1 17 389 evalue:2.0e-74 qcov:95.60 identity:43.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF12412;
pfam_desc Protein of unknown function (DUF3667);
pfam_id DUF3667;
pfam_target db:Pfam-A.hmm|PF12412.8 evalue:9.1e-16 score:56.3 best_domain_score:56.3 name:DUF3667;
tm_num 5;
88767 87595 transmembrane_helix
ID metaerg.pl|07491
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
topology i87862-87930o88384-88452i88471-88539o88567-88635i88684-88752o;
89802 88873 CDS
ID metaerg.pl|07492
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Pseudohaliea;s__Pseudohaliea rubra;
genomedb_acc GCF_000764025.1;
genomedb_target db:genomedb|GCF_000764025.1|WP_052094554.1 21 308 evalue:1.4e-75 qcov:93.20 identity:52.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF13350;
pfam_desc Tyrosine phosphatase family;
pfam_id Y_phosphatase3;
pfam_target db:Pfam-A.hmm|PF13350.6 evalue:2.2e-54 score:184.1 best_domain_score:183.9 name:Y_phosphatase3;
sp YES;
88873 88977 signal_peptide
ID metaerg.pl|07493
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
89975 92227 CDS
ID metaerg.pl|07494
allgo_ids GO:0009279; GO:0016021; GO:0005506; GO:0038023; GO:0055072; GO:0015891;
allko_ids K15721;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium;s__Phenylobacterium sp001724605;
genomedb_acc GCA_001724605.1;
genomedb_target db:genomedb|GCA_001724605.1|ODT85581.1 37 750 evalue:2.3e-196 qcov:95.20 identity:50.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
pfam_acc PF07715; PF00593;
pfam_desc TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:5.2e-17 score:61.6 best_domain_score:59.7 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:1.4e-36 score:126.6 best_domain_score:126.6 name:TonB_dep_Rec;
sp YES;
sprot_desc Pesticin receptor;
sprot_id sp|P46359|FYUA_YERPE;
sprot_target db:uniprot_sprot|sp|P46359|FYUA_YERPE 19 750 evalue:1.2e-23 qcov:97.60 identity:23.90;
89975 90055 signal_peptide
ID metaerg.pl|07495
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
92499 92287 CDS
ID metaerg.pl|07496
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.044007; 12.6488; 0.213841; 0.00473205; 12.9114;
>Feature NODE_49_length_91885_cov_40.401
1120 431 CDS
ID metaerg.pl|07497
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726354.1 1 221 evalue:6.7e-83 qcov:96.50 identity:70.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF03969; PF00308;
pfam_desc AFG1-like ATPase; Bacterial dnaA protein;
pfam_id AFG1_ATPase; Bac_DnaA;
pfam_target db:Pfam-A.hmm|PF03969.16 evalue:0.00013 score:20.3 best_domain_score:17.3 name:AFG1_ATPase; db:Pfam-A.hmm|PF00308.18 evalue:4.5e-06 score:25.9 best_domain_score:13.0 name:Bac_DnaA;
1692 1117 CDS
ID metaerg.pl|07498
allgo_ids GO:0008654; GO:0016020; GO:0016780;
allko_ids K00998;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726355.1 1 185 evalue:2.4e-78 qcov:96.90 identity:77.80;
kegg_pathway_id 00564; 00260;
kegg_pathway_name Glycerophospholipid metabolism; Glycine, serine and threonine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01066;
pfam_desc CDP-alcohol phosphatidyltransferase;
pfam_id CDP-OH_P_transf;
pfam_target db:Pfam-A.hmm|PF01066.21 evalue:2.7e-13 score:49.7 best_domain_score:49.7 name:CDP-OH_P_transf;
tm_num 4;
1692 1117 transmembrane_helix
ID metaerg.pl|07499
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i1177-1245o1378-1446i1480-1548o1576-1635i;
2804 1689 CDS
ID metaerg.pl|07500
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726356.1 29 369 evalue:5.2e-69 qcov:91.90 identity:46.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF09839;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2066);
pfam_id DUF2066;
pfam_target db:Pfam-A.hmm|PF09839.9 evalue:8.2e-38 score:129.3 best_domain_score:128.9 name:DUF2066;
sp YES;
tm_num 1;
1689 1835 signal_peptide
ID metaerg.pl|07501
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
2804 1689 transmembrane_helix
ID metaerg.pl|07502
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i1776-1835o;
2872 3906 CDS
ID metaerg.pl|07503
allec_ids 6.3.3.1;
allgo_ids GO:0005737; GO:0005524; GO:0004641; GO:0006189;
allko_ids K11787; K01933; K11788; K01945; K11175;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726357.1 9 342 evalue:1.7e-143 qcov:97.10 identity:75.40;
kegg_pathway_id 00670; 00230;
kegg_pathway_name One carbon pool by folate; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6121; PWY-6122; PRPP-PWY; PWY-841; PWY-6277;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis I;; 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; AIR-Biosynthesis;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;;
pfam_acc PF00586; PF02769;
pfam_desc AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain;
pfam_id AIRS; AIRS_C;
pfam_target db:Pfam-A.hmm|PF00586.24 evalue:3.8e-17 score:62.0 best_domain_score:61.3 name:AIRS; db:Pfam-A.hmm|PF02769.22 evalue:2.8e-36 score:124.2 best_domain_score:121.5 name:AIRS_C;
sprot_desc Phosphoribosylformylglycinamidine cyclo-ligase;
sprot_id sp|Q1H4W1|PUR5_METFK;
sprot_target db:uniprot_sprot|sp|Q1H4W1|PUR5_METFK 7 338 evalue:1.8e-123 qcov:96.50 identity:63.30;
tigrfam_acc TIGR00878;
tigrfam_desc phosphoribosylformylglycinamidine cyclo-ligase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purM;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00878 evalue:1.4e-138 score:460.8 best_domain_score:460.6 name:TIGR00878;
3903 4577 CDS
ID metaerg.pl|07504
allec_ids 2.1.2.2;
allgo_ids GO:0009058; GO:0016742; GO:0005829; GO:0004644; GO:0006189; GO:0006974;
allko_ids K11175; K01945; K01933; K11787; K11788; K00601;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726358.1 3 224 evalue:3.9e-67 qcov:99.10 identity:61.00;
kegg_pathway_id 00670; 00230;
kegg_pathway_name One carbon pool by folate; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id FOLSYN-PWY; PWY-6121; ALL-CHORISMATE-PWY; PWY-6277; PWY-841;
metacyc_pathway_name superpathway of tetrahydrofolate biosynthesis and salvage;; 5-aminoimidazole ribonucleotide biosynthesis I;; superpathway of chorismate metabolism;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;;
metacyc_pathway_type Folate-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00551;
pfam_desc Formyl transferase;
pfam_id Formyl_trans_N;
pfam_target db:Pfam-A.hmm|PF00551.19 evalue:8.9e-50 score:168.2 best_domain_score:167.9 name:Formyl_trans_N;
sprot_desc Phosphoribosylglycinamide formyltransferase;
sprot_id sp|P08179|PUR3_ECOLI;
sprot_target db:uniprot_sprot|sp|P08179|PUR3_ECOLI 8 209 evalue:5.7e-41 qcov:90.20 identity:42.40;
tigrfam_acc TIGR00639;
tigrfam_desc phosphoribosylglycinamide formyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name PurN;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00639 evalue:1.5e-59 score:199.9 best_domain_score:199.7 name:TIGR00639;
4555 5280 CDS
ID metaerg.pl|07505
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169713.1 1 241 evalue:1.1e-56 qcov:100.00 identity:49.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF11306;
pfam_desc Protein of unknown function (DUF3108);
pfam_id DUF3108;
pfam_target db:Pfam-A.hmm|PF11306.8 evalue:3e-17 score:62.6 best_domain_score:62.3 name:DUF3108;
5330 6604 CDS
ID metaerg.pl|07506
allgo_ids GO:0004222; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726360.1 1 421 evalue:2.4e-171 qcov:99.30 identity:73.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01435; PF07719;
pfam_desc Peptidase family M48; Tetratricopeptide repeat;
pfam_id Peptidase_M48; TPR_2;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:5e-33 score:113.7 best_domain_score:113.2 name:Peptidase_M48; db:Pfam-A.hmm|PF07719.17 evalue:4.1e-10 score:38.2 best_domain_score:15.5 name:TPR_2;
sp YES;
5330 5374 lipoprotein_signal_peptide
ID metaerg.pl|07507
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
6740 8068 CDS
ID metaerg.pl|07508
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169714.1 10 438 evalue:3.3e-155 qcov:97.10 identity:64.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01979;
pfam_desc Amidohydrolase family;
pfam_id Amidohydro_1;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:7.9e-13 score:47.6 best_domain_score:46.8 name:Amidohydro_1;
sp YES;
6740 6793 signal_peptide
ID metaerg.pl|07509
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
8174 8746 CDS
ID metaerg.pl|07510
allgo_ids GO:0008745; GO:0009253;
allko_ids K01446; K01448; K01447;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727090.1 12 185 evalue:2.6e-64 qcov:91.60 identity:69.50;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01510;
pfam_desc N-acetylmuramoyl-L-alanine amidase;
pfam_id Amidase_2;
pfam_target db:Pfam-A.hmm|PF01510.25 evalue:2.7e-21 score:75.6 best_domain_score:75.2 name:Amidase_2;
11407 8759 CDS
ID metaerg.pl|07511
allec_ids 3.4.11.14; 3.4.11.2;
allgo_ids GO:0008237; GO:0008270; GO:0009507; GO:0005737; GO:0004177; GO:0043171; GO:0006508;
allko_ids K01256;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726364.1 1 882 evalue:0.0e+00 qcov:100.00 identity:69.40;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-4041; PWY-4061;
metacyc_pathway_name γ-glutamyl cycle;; glutathione-mediated detoxification I;;
metacyc_pathway_type Reductants; Super-Pathways;; Detoxification; Other-Degradation;;
pfam_acc PF11940; PF17432; PF01433; PF17900;
pfam_desc Domain of unknown function (DUF3458) Ig-like fold; Domain of unknown function (DUF3458_C) ARM repeats; Peptidase family M1 domain; Peptidase M1 N-terminal domain;
pfam_id DUF3458; DUF3458_C; Peptidase_M1; Peptidase_M1_N;
pfam_target db:Pfam-A.hmm|PF11940.8 evalue:2.3e-20 score:72.1 best_domain_score:71.2 name:DUF3458; db:Pfam-A.hmm|PF17432.2 evalue:3e-113 score:377.7 best_domain_score:376.8 name:DUF3458_C; db:Pfam-A.hmm|PF01433.20 evalue:1.1e-52 score:178.0 best_domain_score:177.6 name:Peptidase_M1; db:Pfam-A.hmm|PF17900.1 evalue:5.8e-10 score:38.9 best_domain_score:38.2 name:Peptidase_M1_N;
sprot_desc Puromycin-sensitive aminopeptidase;
sprot_id sp|Q8H0S9|PSA_ARATH;
sprot_target db:uniprot_sprot|sp|Q8H0S9|PSA_ARATH 16 881 evalue:1.8e-231 qcov:98.20 identity:47.50;
tigrfam_acc TIGR02414;
tigrfam_desc aminopeptidase N;
tigrfam_mainrole Protein fate;
tigrfam_name pepN_proteo;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02414 evalue:0 score:1167.2 best_domain_score:1167.1 name:TIGR02414;
11487 12443 CDS
ID metaerg.pl|07512
allec_ids 4.3.1.17;
allgo_ids GO:0005737; GO:0005524; GO:0008721; GO:0003941; GO:0000287; GO:0030170; GO:0030378; GO:0018114; GO:0070179; GO:0006563; GO:0018249; GO:0042866;
allko_ids K12339; K13034; K01754; K01733; K01697; K01738; K10150; K12235;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726365.1 3 318 evalue:1.6e-114 qcov:99.40 identity:69.60;
kegg_pathway_id 00260; 00272; 00450; 00920; 00271; 00750; 00290;
kegg_pathway_name Glycine, serine and threonine metabolism; Cysteine metabolism; Selenoamino acid metabolism; Sulfur metabolism; Methionine metabolism; Vitamin B6 metabolism; Valine, leucine and isoleucine biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-5497; SERDEG-PWY; PWY-3661;
metacyc_pathway_name purine nucleobases degradation II (anaerobic);; L-serine degradation;; glycine betaine degradation I;;
metacyc_pathway_type Fermentation; Purine-Degradation;; SERINE-DEG;; Glycine-Betaine-Degradation;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:5.2e-69 score:232.1 best_domain_score:231.9 name:PALP;
sprot_desc Probable serine racemase;
sprot_id sp|Q54HH2|SRR_DICDI;
sprot_target db:uniprot_sprot|sp|Q54HH2|SRR_DICDI 5 317 evalue:2.6e-63 qcov:98.40 identity:45.30;
12440 12922 CDS
ID metaerg.pl|07513
allko_ids K01834;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726366.1 1 154 evalue:5.6e-36 qcov:96.20 identity:57.10;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF00300;
pfam_desc Histidine phosphatase superfamily (branch 1);
pfam_id His_Phos_1;
pfam_target db:Pfam-A.hmm|PF00300.22 evalue:7.9e-07 score:28.2 best_domain_score:28.0 name:His_Phos_1;
13362 12892 CDS
ID metaerg.pl|07514
allgo_ids GO:0005515; GO:0005829; GO:0070191;
allko_ids K08801; K01768; K07704; K02478; K08968;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726367.1 4 155 evalue:3.8e-61 qcov:97.40 identity:78.30;
kegg_pathway_id 02020; 00271; 00230;
kegg_pathway_name Two-component system - General; Methionine metabolism; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01590; PF13185;
pfam_desc GAF domain; GAF domain;
pfam_id GAF; GAF_2;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:3.1e-08 score:33.6 best_domain_score:33.4 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:1.5e-10 score:40.7 best_domain_score:40.3 name:GAF_2;
sprot_desc hypothetical protein;
sprot_id sp|O34553|YTSP_BACSU;
sprot_target db:uniprot_sprot|sp|O34553|YTSP_BACSU 8 152 evalue:3.3e-40 qcov:92.90 identity:53.70;
13981 13382 CDS
ID metaerg.pl|07515
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726368.1 4 195 evalue:4.7e-56 qcov:96.50 identity:59.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF06080; PF08241; PF08242; PF13489; PF13649;
pfam_desc Protein of unknown function (DUF938); Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain;
pfam_id DUF938; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25;
pfam_target db:Pfam-A.hmm|PF06080.12 evalue:1.2e-57 score:194.2 best_domain_score:193.9 name:DUF938; db:Pfam-A.hmm|PF08241.12 evalue:4.6e-06 score:26.4 best_domain_score:25.8 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:3e-07 score:30.3 best_domain_score:29.7 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:3.4e-09 score:36.0 best_domain_score:35.7 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:4.4e-09 score:36.2 best_domain_score:35.6 name:Methyltransf_25;
15351 13978 CDS
ID metaerg.pl|07516
allec_ids 3.5.3.13;
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169715.1 1 453 evalue:2.7e-139 qcov:99.10 identity:55.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-5028;
metacyc_pathway_name L-histidine degradation II;;
metacyc_pathway_type HISTIDINE-DEG;;
pfam_acc PF01979;
pfam_desc Amidohydrolase family;
pfam_id Amidohydro_1;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:7.9e-22 score:77.2 best_domain_score:76.8 name:Amidohydro_1;
tigrfam_acc TIGR02022;
tigrfam_desc formiminoglutamate deiminase;
tigrfam_mainrole Energy metabolism;
tigrfam_name hutF;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR02022 evalue:1.1e-143 score:478.4 best_domain_score:478.2 name:TIGR02022;
16130 15348 CDS
ID metaerg.pl|07517
allec_ids 3.5.1.68;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726370.1 4 260 evalue:6.2e-77 qcov:98.80 identity:55.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-5028;
metacyc_pathway_name L-histidine degradation II;;
metacyc_pathway_type HISTIDINE-DEG;;
pfam_acc PF05013;
pfam_desc N-formylglutamate amidohydrolase;
pfam_id FGase;
pfam_target db:Pfam-A.hmm|PF05013.12 evalue:1.3e-65 score:220.9 best_domain_score:220.7 name:FGase;
tigrfam_acc TIGR02017;
tigrfam_desc N-formylglutamate deformylase;
tigrfam_mainrole Energy metabolism;
tigrfam_name hutG_amidohyd;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR02017 evalue:6.3e-95 score:316.7 best_domain_score:316.5 name:TIGR02017;
18349 16208 CDS
ID metaerg.pl|07518
allgo_ids GO:0009306; GO:0009279; GO:0043683;
allko_ids K02666;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169716.1 1 713 evalue:5.0e-294 qcov:100.00 identity:74.30;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF11741; PF00263; PF03958; PF07660;
pfam_desc AMIN domain; Bacterial type II and III secretion system protein; Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain;
pfam_id AMIN; Secretin; Secretin_N; STN;
pfam_target db:Pfam-A.hmm|PF11741.8 evalue:2e-14 score:52.7 best_domain_score:38.3 name:AMIN; db:Pfam-A.hmm|PF00263.21 evalue:1.1e-47 score:161.0 best_domain_score:160.3 name:Secretin; db:Pfam-A.hmm|PF03958.17 evalue:4.1e-15 score:55.2 best_domain_score:55.2 name:Secretin_N; db:Pfam-A.hmm|PF07660.14 evalue:3.1e-09 score:35.7 best_domain_score:34.0 name:STN;
sp YES;
sprot_desc Fimbrial assembly protein PilQ;
sprot_id sp|P34750|PILQ_PSEAE;
sprot_target db:uniprot_sprot|sp|P34750|PILQ_PSEAE 10 709 evalue:9.7e-127 qcov:98.20 identity:38.90;
tigrfam_acc TIGR02515;
tigrfam_desc type IV pilus secretin PilQ;
tigrfam_mainrole Cell envelope;
tigrfam_name IV_pilus_PilQ;
tigrfam_sub1role Surface structures;
tigrfam_target db:TIGRFAMs.hmm|TIGR02515 evalue:2.3e-153 score:510.3 best_domain_score:510.0 name:TIGR02515;
16208 16276 signal_peptide
ID metaerg.pl|07519
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
18963 18427 CDS
ID metaerg.pl|07520
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169717.1 1 178 evalue:8.4e-57 qcov:100.00 identity:63.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF04351;
pfam_desc Pilus assembly protein, PilP;
pfam_id PilP;
pfam_target db:Pfam-A.hmm|PF04351.13 evalue:1.3e-43 score:147.7 best_domain_score:147.5 name:PilP;
sp YES;
18427 18489 lipoprotein_signal_peptide
ID metaerg.pl|07521
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
19568 18963 CDS
ID metaerg.pl|07522
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726374.1 1 195 evalue:1.2e-80 qcov:97.00 identity:79.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF04350;
pfam_desc Pilus assembly protein, PilO;
pfam_id PilO;
pfam_target db:Pfam-A.hmm|PF04350.13 evalue:1.1e-47 score:161.1 best_domain_score:160.8 name:PilO;
tm_num 1;
19568 18963 transmembrane_helix
ID metaerg.pl|07523
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology o19020-19088i;
20142 19573 CDS
ID metaerg.pl|07524
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726375.1 1 184 evalue:4.6e-61 qcov:97.40 identity:65.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF05137;
pfam_desc Fimbrial assembly protein (PilN);
pfam_id PilN;
pfam_target db:Pfam-A.hmm|PF05137.13 evalue:1.1e-16 score:59.9 best_domain_score:59.2 name:PilN;
tm_num 1;
20142 19573 transmembrane_helix
ID metaerg.pl|07525
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i19633-19701o;
21215 20142 CDS
ID metaerg.pl|07526
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726376.1 1 357 evalue:5.6e-169 qcov:100.00 identity:83.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF11104;
pfam_desc Type IV pilus assembly protein PilM;;
pfam_id PilM_2;
pfam_target db:Pfam-A.hmm|PF11104.8 evalue:1.4e-113 score:378.6 best_domain_score:378.5 name:PilM_2;
tigrfam_acc TIGR01175;
tigrfam_desc type IV pilus assembly protein PilM;
tigrfam_name pilM;
tigrfam_target db:TIGRFAMs.hmm|TIGR01175 evalue:1e-102 score:342.9 best_domain_score:342.6 name:TIGR01175;
21447 23930 CDS
ID metaerg.pl|07527
allec_ids 2.4.1.129; 3.4.16.4;
allgo_ids GO:0008658; GO:0016021; GO:0005886; GO:0008144; GO:0008955; GO:0009002; GO:0071555; GO:0009252; GO:0008360; GO:0046677;
allko_ids K05364; K08384; K12556; K05365; K03587; K12555; K04478; K08282; K05366; K08884; K05367;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169718.1 1 827 evalue:0.0e+00 qcov:100.00 identity:70.40;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-6385; PWY-5265; PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6470;
metacyc_pathway_name peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF17092; PF00912; PF00905;
pfam_desc Penicillin-binding protein OB-like domain; Transglycosylase; Penicillin binding protein transpeptidase domain;
pfam_id PCB_OB; Transgly; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF17092.5 evalue:1.7e-26 score:92.4 best_domain_score:92.1 name:PCB_OB; db:Pfam-A.hmm|PF00912.22 evalue:5.9e-56 score:188.0 best_domain_score:187.4 name:Transgly; db:Pfam-A.hmm|PF00905.22 evalue:2.5e-32 score:111.5 best_domain_score:89.3 name:Transpeptidase;
sprot_desc Penicillin-binding protein 1A;
sprot_id sp|Q07806|PBPA_PSEAE;
sprot_target db:uniprot_sprot|sp|Q07806|PBPA_PSEAE 30 827 evalue:1.3e-191 qcov:96.50 identity:45.70;
tigrfam_acc TIGR02074;
tigrfam_desc penicillin-binding protein, 1A family;
tigrfam_mainrole Cell envelope;
tigrfam_name PBP_1a_fam;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR02074 evalue:1.6e-166 score:554.4 best_domain_score:554.1 name:TIGR02074;
tm_num 1;
21447 23930 transmembrane_helix
ID metaerg.pl|07528
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i21480-21548o;
23939 24580 CDS
ID metaerg.pl|07529
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726378.1 12 210 evalue:2.9e-72 qcov:93.40 identity:71.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
24813 24583 CDS
ID metaerg.pl|07530
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726379.1 3 68 evalue:5.4e-21 qcov:86.80 identity:75.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
25427 24816 CDS
ID metaerg.pl|07531
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169719.1 1 201 evalue:5.3e-23 qcov:99.00 identity:43.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF14333;
pfam_desc Domain of unknown function (DUF4389);
pfam_id DUF4389;
pfam_target db:Pfam-A.hmm|PF14333.6 evalue:1.4e-19 score:69.0 best_domain_score:68.7 name:DUF4389;
tm_num 1;
25427 24816 transmembrane_helix
ID metaerg.pl|07532
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i24876-24944o;
25549 26580 CDS
ID metaerg.pl|07533
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37012.1 17 341 evalue:6.4e-13 qcov:94.80 identity:31.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
sp YES;
25549 25620 lipoprotein_signal_peptide
ID metaerg.pl|07534
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
26682 28562 CDS
ID metaerg.pl|07535
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0050660; GO:0002098;
allko_ids K03495;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727091.1 7 626 evalue:3.0e-287 qcov:99.00 identity:79.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF00890; PF12831; PF01134; PF13932; PF07992;
pfam_desc FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; GidA associated domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id FAD_binding_2; FAD_oxidored; GIDA; GIDA_assoc; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:6.5e-08 score:31.3 best_domain_score:19.9 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:5.1e-08 score:31.9 best_domain_score:30.9 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:2.7e-167 score:556.0 best_domain_score:555.7 name:GIDA; db:Pfam-A.hmm|PF13932.6 evalue:9.2e-68 score:227.8 best_domain_score:227.3 name:GIDA_assoc; db:Pfam-A.hmm|PF07992.14 evalue:1.7e-07 score:30.0 best_domain_score:29.1 name:Pyr_redox_2;
sprot_desc tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;
sprot_id sp|B8GRC9|MNMG_THISH;
sprot_target db:uniprot_sprot|sp|B8GRC9|MNMG_THISH 1 621 evalue:1.2e-250 qcov:99.20 identity:69.40;
tigrfam_acc TIGR00136;
tigrfam_desc tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA;
tigrfam_mainrole Protein synthesis;
tigrfam_name gidA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00136 evalue:1.2e-261 score:868.6 best_domain_score:868.4 name:TIGR00136;
29175 28777 CDS
ID metaerg.pl|07536
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
sp YES;
28777 28821 lipoprotein_signal_peptide
ID metaerg.pl|07537
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
30845 29322 CDS
ID metaerg.pl|07538
allgo_ids GO:0006814; GO:0015655; GO:0016020; GO:0032328; GO:0016021; GO:0005886;
allko_ids K03310;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726382.1 1 504 evalue:4.6e-193 qcov:99.40 identity:74.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01235;
pfam_desc Sodium:alanine symporter family;
pfam_id Na_Ala_symp;
pfam_target db:Pfam-A.hmm|PF01235.17 evalue:2.3e-145 score:484.1 best_domain_score:483.7 name:Na_Ala_symp;
sprot_desc Amino-acid carrier protein AlsT;
sprot_id sp|Q45068|ALST_BACSU;
sprot_target db:uniprot_sprot|sp|Q45068|ALST_BACSU 6 497 evalue:1.7e-101 qcov:97.00 identity:43.50;
tigrfam_acc TIGR00835;
tigrfam_desc amino acid carrier protein;
tigrfam_name agcS;
tigrfam_target db:TIGRFAMs.hmm|TIGR00835 evalue:1.5e-140 score:468.0 best_domain_score:467.8 name:TIGR00835;
tm_num 11;
30845 29322 transmembrane_helix
ID metaerg.pl|07539
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology o29349-29417i29502-29570o29583-29651i29727-29795o29838-29906i29931-29999o30042-30110i30198-30266o30444-30512i30549-30608o30621-30689i;
31874 30867 CDS
ID metaerg.pl|07540
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169720.1 1 332 evalue:3.5e-141 qcov:99.10 identity:71.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF04307;
pfam_desc LexA-binding, inner membrane-associated putative hydrolase;
pfam_id YdjM;
pfam_target db:Pfam-A.hmm|PF04307.14 evalue:5.1e-28 score:96.8 best_domain_score:96.3 name:YdjM;
tm_num 4;
31874 30867 transmembrane_helix
ID metaerg.pl|07541
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology o31038-31106i31125-31178o31236-31304i31323-31382o;
31929 32261 CDS
ID metaerg.pl|07542
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
sp YES;
31929 31979 lipoprotein_signal_peptide
ID metaerg.pl|07543
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
34174 32312 CDS
ID metaerg.pl|07544
allec_ids 3.4.21.-; 3.4.-.-;
allgo_ids GO:0006508; GO:0008233; GO:0005887; GO:0016020; GO:0005886; GO:0004175; GO:0008236; GO:0006465;
allko_ids K04773;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726384.1 3 619 evalue:4.0e-255 qcov:99.50 identity:70.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01343;
pfam_desc Peptidase family S49;
pfam_id Peptidase_S49;
pfam_target db:Pfam-A.hmm|PF01343.18 evalue:1.7e-77 score:257.9 best_domain_score:164.4 name:Peptidase_S49;
sprot_desc Protease 4;
sprot_id sp|P08395|SPPA_ECOLI;
sprot_target db:uniprot_sprot|sp|P08395|SPPA_ECOLI 18 592 evalue:6.5e-103 qcov:92.70 identity:38.80;
tigrfam_acc TIGR00705; TIGR00706;
tigrfam_desc signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type;
tigrfam_mainrole Protein fate; Protein fate;
tigrfam_name SppA_67K; SppA_dom;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides; Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00705 evalue:7.5e-156 score:519.0 best_domain_score:518.8 name:TIGR00705; db:TIGRFAMs.hmm|TIGR00706 evalue:4.4e-64 score:215.1 best_domain_score:170.8 name:TIGR00706;
tm_num 1;
34174 32312 transmembrane_helix
ID metaerg.pl|07545
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i32372-32440o;
35622 34243 CDS
ID metaerg.pl|07546
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0042910; GO:0006811; GO:0046677;
allko_ids K03327;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169722.1 1 451 evalue:1.3e-189 qcov:98.30 identity:74.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01554;
pfam_desc MatE;
pfam_id MatE;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:6e-61 score:204.0 best_domain_score:108.5 name:MatE;
sprot_desc Probable multidrug resistance protein NorM;
sprot_id sp|Q8P4E6|NORM_XANCP;
sprot_target db:uniprot_sprot|sp|Q8P4E6|NORM_XANCP 5 447 evalue:4.8e-95 qcov:96.50 identity:43.30;
tigrfam_acc TIGR00797;
tigrfam_desc MATE efflux family protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name matE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00797 evalue:6.4e-95 score:317.5 best_domain_score:317.1 name:TIGR00797;
tm_num 12;
35622 34243 transmembrane_helix
ID metaerg.pl|07547
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i34303-34371o34399-34467i34531-34599o34642-34710i34744-34803o34831-34899i34987-35055o35098-35166i35200-35268o35311-35379i35416-35484o35494-35562i;
35734 36054 CDS
ID metaerg.pl|07548
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Pseudoxanthomonas_A;s__Pseudoxanthomonas_A wuyuanensis;
genomedb_acc GCF_900215535.1;
genomedb_target db:genomedb|GCF_900215535.1|WP_097122106.1 1 101 evalue:6.4e-20 qcov:95.30 identity:53.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF14114;
pfam_desc Domain of unknown function (DUF4286);
pfam_id DUF4286;
pfam_target db:Pfam-A.hmm|PF14114.6 evalue:1.2e-18 score:66.6 best_domain_score:66.3 name:DUF4286;
37403 36045 CDS
ID metaerg.pl|07549
allec_ids 3.4.11.1;
allgo_ids GO:0004177; GO:0005622; GO:0006508; GO:0005737; GO:0030145; GO:0008235;
allko_ids K01259; K01255; K11142;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726389.1 1 451 evalue:8.6e-183 qcov:99.80 identity:72.10;
kegg_pathway_id 00330; 00480;
kegg_pathway_name Arginine and proline metabolism; Glutathione metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-5988; PWY-6018;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF00883;
pfam_desc Cytosol aminopeptidase family, catalytic domain;
pfam_id Peptidase_M17;
pfam_target db:Pfam-A.hmm|PF00883.21 evalue:2.7e-98 score:328.3 best_domain_score:328.0 name:Peptidase_M17;
sprot_desc Probable cytosol aminopeptidase;
sprot_id sp|C1AUB5|AMPA_RHOOB;
sprot_target db:uniprot_sprot|sp|C1AUB5|AMPA_RHOOB 95 420 evalue:1.3e-60 qcov:72.10 identity:39.40;
38132 37506 CDS
ID metaerg.pl|07550
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724567.1 1 206 evalue:1.0e-61 qcov:99.00 identity:62.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF12697;
pfam_desc Alpha/beta hydrolase family;
pfam_id Abhydrolase_6;
pfam_target db:Pfam-A.hmm|PF12697.7 evalue:4.7e-08 score:33.1 best_domain_score:33.0 name:Abhydrolase_6;
tm_num 1;
38132 37506 transmembrane_helix
ID metaerg.pl|07551
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i37518-37586o;
39950 38184 CDS
ID metaerg.pl|07552
allec_ids 6.1.1.23; 6.1.1.-;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004815; GO:0050560; GO:0003676; GO:0006422;
allko_ids K01876;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724566.1 1 579 evalue:7.5e-288 qcov:98.50 identity:84.00;
kegg_pathway_id 00970; 00252;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Alanine and aspartate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY490-4;
metacyc_pathway_name L-asparagine biosynthesis III (tRNA-dependent);;
metacyc_pathway_type ASPARAGINE-SYN; Aminoacyl-tRNAs-Charging;;
pfam_acc PF02938; PF00152; PF01336;
pfam_desc GAD domain; tRNA synthetases class II (D, K and N) ; OB-fold nucleic acid binding domain;
pfam_id GAD; tRNA-synt_2; tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF02938.14 evalue:1.7e-26 score:91.6 best_domain_score:90.6 name:GAD; db:Pfam-A.hmm|PF00152.20 evalue:6e-109 score:363.1 best_domain_score:362.6 name:tRNA-synt_2; db:Pfam-A.hmm|PF01336.25 evalue:9.9e-17 score:59.9 best_domain_score:59.1 name:tRNA_anti-codon;
sprot_desc Aspartate--tRNA(Asp/Asn) ligase;
sprot_id sp|Q0A582|SYDND_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0A582|SYDND_ALKEH 1 587 evalue:1.0e-214 qcov:99.80 identity:62.10;
tigrfam_acc TIGR00459;
tigrfam_desc aspartate--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name aspS_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00459 evalue:2.7e-239 score:794.6 best_domain_score:794.3 name:TIGR00459;
40416 40099 CDS
ID metaerg.pl|07553
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7451;s__UBA7451 sp002457275;
genomedb_acc GCA_002457275.1;
genomedb_target db:genomedb|GCA_002457275.1|PDH35701.1 1 95 evalue:1.4e-27 qcov:90.50 identity:65.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF09723;
pfam_desc Zinc ribbon domain;
pfam_id Zn-ribbon_8;
pfam_target db:Pfam-A.hmm|PF09723.10 evalue:2.4e-19 score:68.4 best_domain_score:67.9 name:Zn-ribbon_8;
tigrfam_acc TIGR02605;
tigrfam_desc putative regulatory protein, FmdB family;
tigrfam_mainrole Regulatory functions;
tigrfam_name CxxC_CxxC_SSSS;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02605 evalue:2e-24 score:84.6 best_domain_score:84.1 name:TIGR02605;
40556 41194 CDS
ID metaerg.pl|07554
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724564.1 15 211 evalue:4.2e-63 qcov:92.90 identity:61.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
42254 41274 CDS
ID metaerg.pl|07555
allec_ids 1.1.1.412;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114;
allko_ids K00356; K01897; K03953; K00329; K00143; K22320;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724563.1 1 325 evalue:2.5e-139 qcov:99.70 identity:76.60;
kegg_pathway_id 00130; 05012; 00071; 00300; 00190; 00310;
kegg_pathway_name Ubiquinone biosynthesis; Parkinson's disease; Fatty acid metabolism; Lysine biosynthesis; Oxidative phosphorylation; Lysine degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01073; PF01370; PF16363; PF13460; PF07993; PF05368; PF02719; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; NAD(P)H-binding ; Male sterility protein; NmrA-like family; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; NAD_binding_10; NAD_binding_4; NmrA; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:4.1e-56 score:189.3 best_domain_score:188.9 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:3.9e-31 score:107.6 best_domain_score:107.1 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:2.6e-13 score:49.3 best_domain_score:43.0 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF13460.6 evalue:2.1e-12 score:46.6 best_domain_score:45.6 name:NAD_binding_10; db:Pfam-A.hmm|PF07993.12 evalue:7.7e-15 score:54.0 best_domain_score:38.2 name:NAD_binding_4; db:Pfam-A.hmm|PF05368.13 evalue:1.6e-05 score:23.8 best_domain_score:23.7 name:NmrA; db:Pfam-A.hmm|PF02719.15 evalue:6.7e-07 score:28.0 best_domain_score:24.9 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:2e-11 score:42.7 best_domain_score:42.2 name:RmlD_sub_bind;
sprot_desc 2-alkyl-3-oxoalkanoate reductase;
sprot_id sp|B2FI29|OLED_STRMK;
sprot_target db:uniprot_sprot|sp|B2FI29|OLED_STRMK 1 324 evalue:2.2e-86 qcov:99.40 identity:52.90;
42404 42961 CDS
ID metaerg.pl|07556
allec_ids 3.6.1.9;
allgo_ids GO:0047429; GO:0005737; GO:0035529; GO:0009117;
allko_ids K06287;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724643.1 1 185 evalue:2.2e-60 qcov:100.00 identity:65.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF02545;
pfam_desc Maf-like protein;
pfam_id Maf;
pfam_target db:Pfam-A.hmm|PF02545.14 evalue:3.5e-54 score:182.3 best_domain_score:182.2 name:Maf;
sprot_desc dTTP/UTP pyrophosphatase;
sprot_id sp|Q5P2U3|NTPPA_AROAE;
sprot_target db:uniprot_sprot|sp|Q5P2U3|NTPPA_AROAE 3 183 evalue:1.2e-44 qcov:97.80 identity:51.00;
tigrfam_acc TIGR00172;
tigrfam_desc septum formation protein Maf;
tigrfam_mainrole Cellular processes;
tigrfam_name maf;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR00172 evalue:1e-51 score:174.3 best_domain_score:174.1 name:TIGR00172;
43644 43183 CDS
ID metaerg.pl|07557
allec_ids 2.1.1.177;
allgo_ids GO:0006364; GO:0008168; GO:0005737; GO:0070038;
allko_ids K00783;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724642.1 1 152 evalue:5.2e-63 qcov:99.30 identity:74.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF02590;
pfam_desc Predicted SPOUT methyltransferase;
pfam_id SPOUT_MTase;
pfam_target db:Pfam-A.hmm|PF02590.17 evalue:4.1e-44 score:149.5 best_domain_score:149.3 name:SPOUT_MTase;
sprot_desc Ribosomal RNA large subunit methyltransferase H;
sprot_id sp|A1U3C0|RLMH_MARHV;
sprot_target db:uniprot_sprot|sp|A1U3C0|RLMH_MARHV 1 153 evalue:1.4e-38 qcov:100.00 identity:46.80;
44020 43655 CDS
ID metaerg.pl|07558
allgo_ids GO:0005737; GO:0042256; GO:0090071; GO:0017148;
allko_ids K09710;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724641.1 1 120 evalue:4.2e-44 qcov:99.20 identity:78.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF02410;
pfam_desc Ribosomal silencing factor during starvation;
pfam_id RsfS;
pfam_target db:Pfam-A.hmm|PF02410.15 evalue:3e-28 score:97.4 best_domain_score:97.2 name:RsfS;
sprot_desc Ribosomal silencing factor RsfS;
sprot_id sp|Q02SH2|IOJAP_PSEAB;
sprot_target db:uniprot_sprot|sp|Q02SH2|IOJAP_PSEAB 20 118 evalue:1.3e-23 qcov:81.80 identity:52.50;
tigrfam_acc TIGR00090;
tigrfam_desc ribosome silencing factor;
tigrfam_mainrole Protein synthesis;
tigrfam_name rsfS_iojap_ybeB;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00090 evalue:3.8e-36 score:122.4 best_domain_score:122.2 name:TIGR00090;
44717 44052 CDS
ID metaerg.pl|07559
allec_ids 2.7.7.18;
allgo_ids GO:0003824; GO:0009058; GO:0005524; GO:0004515; GO:0009435;
allko_ids K00969;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724640.1 1 211 evalue:5.4e-106 qcov:95.50 identity:88.20;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id NADSYN-PWY; PWY-5653; PWY0-781; PYRIDNUCSYN-PWY; PWY-5381; PWY-3502;
metacyc_pathway_name NAD de novo biosynthesis II (from tryptophan);; NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde;; aspartate superpathway;; NAD de novo biosynthesis I (from aspartate);; pyridine nucleotide cycling (plants);; superpathway of NAD biosynthesis in eukaryotes;;
metacyc_pathway_type NAD-SYN; Super-Pathways;; NAD-SYN;; Super-Pathways;; NAD-SYN;; NAD-Metabolism;; NAD-SYN; Super-Pathways;;
pfam_acc PF01467;
pfam_desc Cytidylyltransferase-like;
pfam_id CTP_transf_like;
pfam_target db:Pfam-A.hmm|PF01467.26 evalue:2.5e-26 score:91.8 best_domain_score:91.6 name:CTP_transf_like;
sprot_desc Probable nicotinate-nucleotide adenylyltransferase;
sprot_id sp|Q606Y2|NADD_METCA;
sprot_target db:uniprot_sprot|sp|Q606Y2|NADD_METCA 6 211 evalue:2.7e-51 qcov:93.20 identity:51.20;
tigrfam_acc TIGR00125; TIGR00482;
tigrfam_desc cytidyltransferase-like domain; nicotinate (nicotinamide) nucleotide adenylyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cyt_tran_rel; TIGR00482;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00125 evalue:9.7e-10 score:37.7 best_domain_score:33.1 name:TIGR00125; db:TIGRFAMs.hmm|TIGR00482 evalue:1.2e-45 score:155.1 best_domain_score:154.8 name:TIGR00482;
45733 44714 CDS
ID metaerg.pl|07560
allec_ids 2.7.7.7;
allgo_ids GO:0003677; GO:0003887; GO:0006260; GO:0009360;
allko_ids K02340;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724639.1 1 334 evalue:5.0e-127 qcov:98.50 identity:66.20;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF06144;
pfam_desc DNA polymerase III, delta subunit;
pfam_id DNA_pol3_delta;
pfam_target db:Pfam-A.hmm|PF06144.13 evalue:1.3e-21 score:76.4 best_domain_score:75.9 name:DNA_pol3_delta;
tigrfam_acc TIGR01128;
tigrfam_desc DNA polymerase III, delta subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name holA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01128 evalue:3.6e-72 score:242.5 best_domain_score:242.3 name:TIGR01128;
46250 45768 CDS
ID metaerg.pl|07561
allgo_ids GO:0019867; GO:0043165;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37312.1 3 158 evalue:1.3e-45 qcov:97.50 identity:63.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF04390;
pfam_desc Lipopolysaccharide-assembly;
pfam_id LptE;
pfam_target db:Pfam-A.hmm|PF04390.12 evalue:1.8e-05 score:24.6 best_domain_score:24.3 name:LptE;
sp YES;
45768 45812 lipoprotein_signal_peptide
ID metaerg.pl|07562
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
48838 46250 CDS
ID metaerg.pl|07563
allec_ids 6.1.1.4;
allgo_ids GO:0004812; GO:0006418; GO:0005737; GO:0002161; GO:0005524; GO:0004823; GO:0006429;
allko_ids K01869;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724637.1 1 862 evalue:0.0e+00 qcov:100.00 identity:81.80;
kegg_pathway_id 00970; 00290;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Valine, leucine and isoleucine biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF08264; PF00133; PF09334; PF13603;
pfam_desc Anticodon-binding domain of tRNA; tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Leucyl-tRNA synthetase, Domain 2;
pfam_id Anticodon_1; tRNA-synt_1; tRNA-synt_1g; tRNA-synt_1_2;
pfam_target db:Pfam-A.hmm|PF08264.13 evalue:5.1e-19 score:68.0 best_domain_score:67.1 name:Anticodon_1; db:Pfam-A.hmm|PF00133.22 evalue:7.3e-59 score:198.8 best_domain_score:137.9 name:tRNA-synt_1; db:Pfam-A.hmm|PF09334.11 evalue:6.7e-24 score:83.6 best_domain_score:59.2 name:tRNA-synt_1g; db:Pfam-A.hmm|PF13603.6 evalue:2.6e-73 score:244.7 best_domain_score:244.1 name:tRNA-synt_1_2;
sprot_desc Leucine--tRNA ligase;
sprot_id sp|A4VQZ0|SYL_PSEU5;
sprot_target db:uniprot_sprot|sp|A4VQZ0|SYL_PSEU5 1 862 evalue:0.0e+00 qcov:100.00 identity:63.60;
tigrfam_acc TIGR00396;
tigrfam_desc leucine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name leuS_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00396 evalue:0 score:1119.4 best_domain_score:1119.3 name:TIGR00396;
49448 48939 CDS
ID metaerg.pl|07564
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B paradoxus;
genomedb_acc GCF_000227685.2;
genomedb_target db:genomedb|GCF_000227685.2|WP_006746614.1 1 168 evalue:9.5e-10 qcov:99.40 identity:39.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
sp YES;
48939 48989 lipoprotein_signal_peptide
ID metaerg.pl|07565
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
49517 50185 CDS
ID metaerg.pl|07566
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37132.1 22 221 evalue:1.1e-53 qcov:90.10 identity:57.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
sp YES;
49517 49672 lipoprotein_signal_peptide
ID metaerg.pl|07567
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
51689 50205 CDS
ID metaerg.pl|07568
allec_ids 5.3.1.9;
allgo_ids GO:0004347; GO:0006094; GO:0006096; GO:0005737;
allko_ids K01810;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169379.1 1 485 evalue:4.1e-146 qcov:98.20 identity:56.90;
kegg_pathway_id 00030; 00010; 00500;
kegg_pathway_name Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Starch and sucrose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id P341-PWY; PWY-622; PWY-6142; COLANSYN-PWY; PWY-5659; GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAGLYCOLYSIS-PWY; PWY-5384; ANAEROFRUCAT-PWY; PWY-621; PWY-3801; GLYCOLYSIS; GLYCOLYSIS-E-D; P122-PWY; PWY-6146; P124-PWY; GLUCONEO-PWY;
metacyc_pathway_name glycolysis V (Pyrococcus);; starch biosynthesis;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; colanic acid building blocks biosynthesis;; GDP-mannose biosynthesis;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis III (from glucose);; sucrose degradation IV (sucrose phosphorylase);; homolactic fermentation;; sucrose degradation III (sucrose invertase);; sucrose degradation II (sucrose synthase);; glycolysis I (from glucose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;; heterolactic fermentation;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; Bifidobacterium shunt;; gluconeogenesis I;;
metacyc_pathway_type GLYCOLYSIS-VARIANTS;; GLYCOGEN-BIOSYN;; Gluconeogenesis; Super-Pathways;; Carbohydrates-Biosynthesis; Super-Pathways;; GDP-Sugar-Biosynthesis;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Fermentation-to-Lactate; Super-Pathways;; SUCROSE-DEG;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Biosynthesis; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Gluconeogenesis;;
pfam_acc PF00342;
pfam_desc Phosphoglucose isomerase;
pfam_id PGI;
pfam_target db:Pfam-A.hmm|PF00342.19 evalue:9.3e-103 score:343.6 best_domain_score:343.0 name:PGI;
sprot_desc Glucose-6-phosphate isomerase;
sprot_id sp|P0A0T0|G6PI_XANAC;
sprot_target db:uniprot_sprot|sp|P0A0T0|G6PI_XANAC 16 491 evalue:9.1e-92 qcov:96.40 identity:43.70;
52085 51705 CDS
ID metaerg.pl|07569
allec_ids 4.1.1.11;
allgo_ids GO:0004068; GO:0006523; GO:0005737; GO:0015940;
allko_ids K01579;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724631.1 1 126 evalue:3.1e-45 qcov:100.00 identity:77.00;
kegg_pathway_id 00252; 00410;
kegg_pathway_name Alanine and aspartate metabolism; beta-Alanine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-5155; PANTOSYN-PWY;
metacyc_pathway_name β-alanine biosynthesis III;; superpathway of coenzyme A biosynthesis I (bacteria);;
metacyc_pathway_type Beta-Alanine-Biosynthesis;; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;;
pfam_acc PF02261;
pfam_desc Aspartate decarboxylase;
pfam_id Asp_decarbox;
pfam_target db:Pfam-A.hmm|PF02261.16 evalue:4.5e-50 score:167.6 best_domain_score:167.5 name:Asp_decarbox;
sprot_desc Aspartate 1-decarboxylase;
sprot_id sp|Q1H3S3|PAND_METFK;
sprot_target db:uniprot_sprot|sp|Q1H3S3|PAND_METFK 1 126 evalue:1.9e-41 qcov:100.00 identity:68.30;
tigrfam_acc TIGR00223;
tigrfam_desc aspartate 1-decarboxylase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name panD;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00223 evalue:2.5e-48 score:162.3 best_domain_score:162.2 name:TIGR00223;
52563 52997 CDS
ID metaerg.pl|07570
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724630.1 6 144 evalue:5.4e-30 qcov:96.50 identity:53.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF11911;
pfam_desc Protein of unknown function (DUF3429);
pfam_id DUF3429;
pfam_target db:Pfam-A.hmm|PF11911.8 evalue:8.1e-21 score:74.1 best_domain_score:73.9 name:DUF3429;
tm_num 4;
52563 52997 transmembrane_helix
ID metaerg.pl|07571
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i52599-52667o52677-52745i52806-52874o52917-52985i;
52987 53664 CDS
ID metaerg.pl|07572
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016887; GO:0016021; GO:0005886; GO:0015562; GO:0015893; GO:0046677;
allko_ids K02023; K02018; K01990; K10243; K09812; K02000; K11962; K02031; K10111; K01998; K10112; K01995; K02065; K02049; K11076; K10235; K05816; K10199; K06861; K02071; K01996; K11072; K02045; K02068; K02062; K02052; K02006; K02004; K01997; K02003; K02010; K05847; K02032; K02017; K11084; K05685;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726951.1 7 224 evalue:3.6e-57 qcov:96.90 identity:56.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-6135; PWY-6171; PWY-6188; PWY-6166; PWYG-321; PWY-6113;
metacyc_pathway_name ; ; ; ; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:3.9e-33 score:114.1 best_domain_score:113.7 name:ABC_tran;
sprot_desc Macrolide export ATP-binding/permease protein MacB 1;
sprot_id sp|Q1CJW8|MACB1_YERPN;
sprot_target db:uniprot_sprot|sp|Q1CJW8|MACB1_YERPN 7 225 evalue:5.5e-44 qcov:97.30 identity:42.10;
53664 56102 CDS
ID metaerg.pl|07573
allgo_ids GO:0016020;
allko_ids K09808; K02004;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724629.1 1 808 evalue:9.3e-196 qcov:99.50 identity:53.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF02687; PF12704;
pfam_desc FtsX-like permease family; MacB-like periplasmic core domain;
pfam_id FtsX; MacB_PCD;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:6.2e-17 score:61.1 best_domain_score:44.5 name:FtsX; db:Pfam-A.hmm|PF12704.7 evalue:5.3e-09 score:35.9 best_domain_score:26.8 name:MacB_PCD;
tm_num 10;
53664 56102 transmembrane_helix
ID metaerg.pl|07574
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i53718-53786o54384-54452i54510-54578o54672-54740i54822-54890o54900-54968i55053-55121o55704-55772i55833-55901o55980-56048i;
56096 57244 CDS
ID metaerg.pl|07575
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724628.1 5 373 evalue:1.4e-120 qcov:96.60 identity:59.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF07143; PF17186;
pfam_desc CrtC N-terminal lipocalin domain; Lipocalin-like domain;
pfam_id CrtC; Lipocalin_9;
pfam_target db:Pfam-A.hmm|PF07143.11 evalue:3.3e-49 score:167.0 best_domain_score:166.4 name:CrtC; db:Pfam-A.hmm|PF17186.4 evalue:8.5e-38 score:128.8 best_domain_score:127.3 name:Lipocalin_9;
sp YES;
56096 56176 signal_peptide
ID metaerg.pl|07576
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
58218 57238 CDS
ID metaerg.pl|07577
allgo_ids GO:0003677; GO:0006310; GO:0015074;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724627.1 1 297 evalue:2.7e-69 qcov:91.10 identity:48.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF00589; PF13495;
pfam_desc Phage integrase family; Phage integrase, N-terminal SAM-like domain;
pfam_id Phage_integrase; Phage_int_SAM_4;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:2.1e-16 score:59.4 best_domain_score:57.9 name:Phage_integrase; db:Pfam-A.hmm|PF13495.6 evalue:6.5e-12 score:45.0 best_domain_score:43.9 name:Phage_int_SAM_4;
59575 58283 CDS
ID metaerg.pl|07578
allgo_ids GO:0016787; GO:0016810; GO:0019700;
allko_ids K01468;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37005.1 7 428 evalue:4.9e-151 qcov:98.10 identity:65.00;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:2.9e-49 score:167.5 best_domain_score:167.2 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:5.7e-19 score:68.2 best_domain_score:48.0 name:Amidohydro_3;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P40896|YJV3_YEAST;
sprot_target db:uniprot_sprot|sp|P40896|YJV3_YEAST 117 426 evalue:1.2e-34 qcov:72.10 identity:32.80;
58283 58348 signal_peptide
ID metaerg.pl|07579
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
60509 59688 CDS
ID metaerg.pl|07580
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724626.1 1 273 evalue:3.0e-74 qcov:100.00 identity:57.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
tm_num 5;
60509 59688 transmembrane_helix
ID metaerg.pl|07581
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i59694-59753o59811-59879i59892-59945o60093-60161i60450-60503o;
60915 60574 CDS
ID metaerg.pl|07582
allgo_ids GO:0005506; GO:0051536; GO:0005198; GO:0016226; GO:0097428;
allko_ids K15724;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724625.1 1 113 evalue:2.6e-48 qcov:100.00 identity:84.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01521;
pfam_desc Iron-sulphur cluster biosynthesis;
pfam_id Fe-S_biosyn;
pfam_target db:Pfam-A.hmm|PF01521.20 evalue:7e-18 score:64.1 best_domain_score:63.9 name:Fe-S_biosyn;
sprot_desc Iron-sulfur cluster insertion protein ErpA;
sprot_id sp|Q9CNH3|ERPA_PASMU;
sprot_target db:uniprot_sprot|sp|Q9CNH3|ERPA_PASMU 6 112 evalue:3.2e-40 qcov:94.70 identity:69.20;
tigrfam_acc TIGR00049;
tigrfam_desc iron-sulfur cluster assembly accessory protein;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00049;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00049 evalue:9e-35 score:118.2 best_domain_score:118.1 name:TIGR00049;
61229 61648 CDS
ID metaerg.pl|07583
allgo_ids GO:0016021; GO:0005886;
allko_ids K08973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724624.1 1 139 evalue:3.8e-49 qcov:100.00 identity:74.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF03653;
pfam_desc Uncharacterised protein family (UPF0093);
pfam_id UPF0093;
pfam_target db:Pfam-A.hmm|PF03653.13 evalue:3.4e-45 score:153.1 best_domain_score:153.0 name:UPF0093;
sprot_desc hypothetical protein;
sprot_id sp|O26018|Y1484_HELPY;
sprot_target db:uniprot_sprot|sp|O26018|Y1484_HELPY 3 139 evalue:2.1e-25 qcov:98.60 identity:46.00;
tm_num 4;
61229 61648 transmembrane_helix
ID metaerg.pl|07584
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology o61244-61312i61373-61441o61484-61543i61580-61636o;
61645 63372 CDS
ID metaerg.pl|07585
allko_ids K04013;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169378.1 5 571 evalue:7.3e-227 qcov:98.60 identity:68.70;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF13715; PF13620; PF13435; PF14537;
pfam_desc CarboxypepD_reg-like domain; Carboxypeptidase regulatory-like domain; Cytochrome c554 and c-prime; Cytochrome c3;
pfam_id CarbopepD_reg_2; CarboxypepD_reg; Cytochrome_C554; Cytochrom_c3_2;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:1.1e-08 score:34.2 best_domain_score:33.5 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF13620.6 evalue:1.4e-09 score:37.4 best_domain_score:36.3 name:CarboxypepD_reg; db:Pfam-A.hmm|PF13435.6 evalue:4.4e-07 score:30.0 best_domain_score:24.5 name:Cytochrome_C554; db:Pfam-A.hmm|PF14537.6 evalue:7e-06 score:25.7 best_domain_score:16.3 name:Cytochrom_c3_2;
sp YES;
tm_num 2;
61645 61707 signal_peptide
ID metaerg.pl|07586
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
61645 63372 transmembrane_helix
ID metaerg.pl|07587
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i61657-61725o63301-63354i;
65817 63979 CDS
ID metaerg.pl|07588
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726517.1 27 612 evalue:4.0e-74 qcov:95.80 identity:36.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
tm_num 10;
65817 63979 transmembrane_helix
ID metaerg.pl|07589
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology o64066-64125i64162-64230o64273-64341i64360-64428o64546-64614i64627-64695o64852-64920i64933-65001o65014-65073i65092-65148o;
66409 65846 CDS
ID metaerg.pl|07590
allec_ids 3.6.1.-;
allgo_ids GO:0016787; GO:0005829; GO:0019144; GO:0000287;
allko_ids K01515; K08312;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724622.1 8 185 evalue:3.0e-81 qcov:95.20 identity:80.30;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-6383; FOLSYN-PWY; ALL-CHORISMATE-PWY; PWY-6502; PWY-6147; PWY-5354; PWY-6404;
metacyc_pathway_name mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;; oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; ; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;; Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;; ; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:6.3e-14 score:51.4 best_domain_score:50.2 name:NUDIX;
sprot_desc ADP compounds hydrolase NudE;
sprot_id sp|P45799|NUDE_ECOLI;
sprot_target db:uniprot_sprot|sp|P45799|NUDE_ECOLI 2 183 evalue:2.3e-40 qcov:97.30 identity:47.80;
67450 66656 CDS
ID metaerg.pl|07591
allec_ids 3.1.3.15;
allgo_ids GO:0046854; GO:0005829; GO:0005886; GO:0004401; GO:0008934; GO:0046872; GO:0042578; GO:0000105; GO:0010125;
allko_ids K05602;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724621.1 1 257 evalue:4.7e-104 qcov:97.30 identity:73.90;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PRPP-PWY; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; HISTIDINE-SYN;;
pfam_acc PF00459;
pfam_desc Inositol monophosphatase family;
pfam_id Inositol_P;
pfam_target db:Pfam-A.hmm|PF00459.25 evalue:2e-48 score:164.5 best_domain_score:164.2 name:Inositol_P;
sprot_desc Histidinol-phosphatase;
sprot_id sp|P95189|HISN_MYCTU;
sprot_target db:uniprot_sprot|sp|P95189|HISN_MYCTU 8 256 evalue:3.1e-38 qcov:94.30 identity:40.70;
68223 67516 CDS
ID metaerg.pl|07592
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724620.1 1 235 evalue:2.2e-57 qcov:100.00 identity:47.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01203;
pfam_desc Type II secretion system (T2SS), protein N;
pfam_id T2SSN;
pfam_target db:Pfam-A.hmm|PF01203.19 evalue:1.1e-15 score:57.6 best_domain_score:57.2 name:T2SSN;
sp YES;
tm_num 1;
67516 67608 signal_peptide
ID metaerg.pl|07593
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
68223 67516 transmembrane_helix
ID metaerg.pl|07594
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i67534-67602o;
68701 68216 CDS
ID metaerg.pl|07595
allgo_ids GO:0009306;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724619.1 1 161 evalue:3.8e-48 qcov:100.00 identity:62.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF04612;
pfam_desc Type II secretion system (T2SS), protein M;
pfam_id T2SSM;
pfam_target db:Pfam-A.hmm|PF04612.12 evalue:3e-33 score:114.4 best_domain_score:114.2 name:T2SSM;
tm_num 1;
68701 68216 transmembrane_helix
ID metaerg.pl|07596
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology o68258-68314i;
69873 68698 CDS
ID metaerg.pl|07597
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724618.1 1 389 evalue:1.6e-100 qcov:99.50 identity:51.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF12693; PF05134;
pfam_desc GspL periplasmic domain; Type II secretion system (T2SS), protein L;
pfam_id GspL_C; T2SSL;
pfam_target db:Pfam-A.hmm|PF12693.7 evalue:4.8e-18 score:64.7 best_domain_score:63.9 name:GspL_C; db:Pfam-A.hmm|PF05134.13 evalue:1.5e-21 score:76.1 best_domain_score:75.4 name:T2SSL;
tm_num 1;
69873 68698 transmembrane_helix
ID metaerg.pl|07598
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology o69403-69471i;
70803 69880 CDS
ID metaerg.pl|07599
allgo_ids GO:0009306; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169377.1 9 306 evalue:9.9e-98 qcov:97.10 identity:63.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF03934;
pfam_desc Type II secretion system (T2SS), protein K;
pfam_id T2SSK;
pfam_target db:Pfam-A.hmm|PF03934.13 evalue:3e-54 score:183.5 best_domain_score:183.2 name:T2SSK;
sp YES;
sprot_desc Type II secretion system protein K;
sprot_id sp|P31706|GSPK_PECCC;
sprot_target db:uniprot_sprot|sp|P31706|GSPK_PECCC 9 294 evalue:8.6e-24 qcov:93.20 identity:27.80;
tm_num 1;
69880 69963 signal_peptide
ID metaerg.pl|07600
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
70803 69880 transmembrane_helix
ID metaerg.pl|07601
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i69916-69975o;
71381 70800 CDS
ID metaerg.pl|07602
allgo_ids GO:0008565; GO:0015627; GO:0015628;
allko_ids K02459;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169376.1 1 192 evalue:8.2e-50 qcov:99.50 identity:56.00;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF07963; PF11612;
pfam_desc Prokaryotic N-terminal methylation motif; Type II secretion system (T2SS), protein J;
pfam_id N_methyl; T2SSJ;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:1.2e-09 score:36.5 best_domain_score:35.8 name:N_methyl; db:Pfam-A.hmm|PF11612.8 evalue:4.3e-31 score:107.2 best_domain_score:106.9 name:T2SSJ;
sp YES;
sprot_desc Type II secretion system protein J;
sprot_id sp|Q00517|GSPJ_PSEAE;
sprot_target db:uniprot_sprot|sp|Q00517|GSPJ_PSEAE 1 188 evalue:4.3e-21 qcov:97.40 identity:32.70;
tigrfam_acc TIGR01711; TIGR02532;
tigrfam_desc type II secretion system protein J; prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name gspJ; IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01711 evalue:4e-35 score:120.5 best_domain_score:120.2 name:TIGR01711; db:TIGRFAMs.hmm|TIGR02532 evalue:4.4e-08 score:31.8 best_domain_score:30.8 name:TIGR02532;
tm_num 1;
70800 70877 signal_peptide
ID metaerg.pl|07603
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
71381 70800 transmembrane_helix
ID metaerg.pl|07604
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i70818-70886o;
71746 71378 CDS
ID metaerg.pl|07605
allgo_ids GO:0008565; GO:0015627; GO:0015628;
allko_ids K02458;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724615.1 3 121 evalue:2.5e-36 qcov:97.50 identity:65.50;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF07963; PF02501;
pfam_desc Prokaryotic N-terminal methylation motif; Type II secretion system (T2SS), protein I;
pfam_id N_methyl; T2SSI;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:8.4e-10 score:37.0 best_domain_score:36.4 name:N_methyl; db:Pfam-A.hmm|PF02501.17 evalue:9.3e-22 score:76.2 best_domain_score:75.5 name:T2SSI;
sp YES;
sprot_desc Type II secretion system protein I;
sprot_id sp|Q00516|GSPI_PSEAE;
sprot_target db:uniprot_sprot|sp|Q00516|GSPI_PSEAE 4 103 evalue:1.1e-09 qcov:82.00 identity:35.60;
tigrfam_acc TIGR01707; TIGR02532;
tigrfam_desc type II secretion system protein I; prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name gspI; IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01707 evalue:7.2e-23 score:80.2 best_domain_score:80.0 name:TIGR01707; db:TIGRFAMs.hmm|TIGR02532 evalue:1.1e-07 score:30.6 best_domain_score:30.0 name:TIGR02532;
tm_num 1;
71378 71485 signal_peptide
ID metaerg.pl|07606
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
71746 71378 transmembrane_helix
ID metaerg.pl|07607
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i71411-71479o;
72225 71746 CDS
ID metaerg.pl|07608
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724614.1 2 158 evalue:1.4e-34 qcov:98.70 identity:50.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF07963;
pfam_desc Prokaryotic N-terminal methylation motif;
pfam_id N_methyl;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:3.5e-07 score:28.8 best_domain_score:28.1 name:N_methyl;
tigrfam_acc TIGR01708; TIGR02532;
tigrfam_desc type II secretion system protein H; prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Cellular processes; Protein fate;
tigrfam_name typeII_sec_gspH; IV_pilin_GFxxxE;
tigrfam_sub1role Pathogenesis; Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01708 evalue:1.8e-22 score:78.9 best_domain_score:78.4 name:TIGR01708; db:TIGRFAMs.hmm|TIGR02532 evalue:2e-06 score:26.6 best_domain_score:25.8 name:TIGR02532;
tm_num 1;
72225 71746 transmembrane_helix
ID metaerg.pl|07609
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i71758-71826o;
72706 72254 CDS
ID metaerg.pl|07610
allgo_ids GO:0015627; GO:0015628;
allko_ids K02456;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724613.1 1 144 evalue:9.9e-59 qcov:96.00 identity:78.50;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF07963; PF08334;
pfam_desc Prokaryotic N-terminal methylation motif; Type II secretion system (T2SS), protein G;
pfam_id N_methyl; T2SSG;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:2.8e-08 score:32.2 best_domain_score:31.8 name:N_methyl; db:Pfam-A.hmm|PF08334.11 evalue:3.2e-40 score:135.8 best_domain_score:135.6 name:T2SSG;
sprot_desc Type II secretion system protein G;
sprot_id sp|Q00514|GSPG_PSEAE;
sprot_target db:uniprot_sprot|sp|Q00514|GSPG_PSEAE 8 144 evalue:1.9e-40 qcov:91.30 identity:55.50;
tigrfam_acc TIGR01710; TIGR02532;
tigrfam_desc type II secretion system protein G; prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Cellular processes; Protein fate;
tigrfam_name typeII_sec_gspG; IV_pilin_GFxxxE;
tigrfam_sub1role Pathogenesis; Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01710 evalue:7.1e-53 score:177.4 best_domain_score:177.2 name:TIGR01710; db:TIGRFAMs.hmm|TIGR02532 evalue:2.3e-06 score:26.4 best_domain_score:25.9 name:TIGR02532;
tm_num 1;
72706 72254 transmembrane_helix
ID metaerg.pl|07611
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology o72281-72349i;
72766 74109 CDS
ID metaerg.pl|07612
allec_ids 2.6.1.62;
allgo_ids GO:0008483; GO:0030170; GO:0005737; GO:0004015; GO:0009102;
allko_ids K05830; K00818; K00821;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724612.1 1 447 evalue:9.6e-227 qcov:100.00 identity:84.80;
kegg_pathway_id 00220; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Lysine biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-5005; BIOTIN-BIOSYNTHESIS-PWY;
metacyc_pathway_name biotin biosynthesis II;; biotin biosynthesis I;;
metacyc_pathway_type BIOTIN-SYN; Super-Pathways;; BIOTIN-SYN; Super-Pathways;;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:3.1e-117 score:390.9 best_domain_score:390.5 name:Aminotran_3;
sprot_desc Adenosylmethionine-8-amino-7-oxononanoate aminotransferase;
sprot_id sp|P22805|BIOA_LYSSH;
sprot_target db:uniprot_sprot|sp|P22805|BIOA_LYSSH 7 431 evalue:5.0e-121 qcov:95.10 identity:50.50;
tigrfam_acc TIGR00508;
tigrfam_desc adenosylmethionine-8-amino-7-oxononanoate transaminase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name bioA;
tigrfam_sub1role Biotin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00508 evalue:1.6e-170 score:566.4 best_domain_score:566.3 name:TIGR00508;
74109 74840 CDS
ID metaerg.pl|07613
allec_ids 2.1.1.193; 2.1.1.-;
allgo_ids GO:0006364; GO:0008168; GO:0005737;
allko_ids K09761;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724611.1 1 242 evalue:1.7e-76 qcov:99.60 identity:60.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-5467; PWY-6477; PWY-6575; PWY-6442; CODH-PWY; PWY-4021; PWY-5041; PWY-6153; PWY-3542; ALL-CHORISMATE-PWY; PWY-1061; PWY-5876; PWY-5864; PWY-5975; PWY-6113; PWY-5729; PWY-5305; PWYG-321; PWY-1422; PWY-5855; PWY-5209; PWY-6151; PWY-6303; PWY-5857; METH-ACETATE-PWY; PWY-6142; PWY-6154; UBISYN-PWY; PWY-6424; PWY-5856; CO2FORM-PWY; PWY-5116; PWY-1581; PWY-5773; PWY-6519; METHIONINE-DEG1-PWY; PWY-5328; PWY-6146; PWY-6427; PWY-6395; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6292; PWY-5479; PWY-5987;
metacyc_pathway_name gramine biosynthesis;; gibberellin inactivation II (methylation);; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; autoinducer AI-2 biosynthesis I;; choline biosynthesis II;; superpathway of chorismate metabolism;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; vitamin E biosynthesis (tocopherols);; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; methanogenesis from acetate;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ; ubiquinol-9 biosynthesis (prokaryotic);; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; xanthohumol biosynthesis;; biotin biosynthesis I;; superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;;
metacyc_pathway_type INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Autotrophic-CO2-Fixation;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Autoinducer-Biosynthesis;; Choline-Biosynthesis;; Super-Pathways;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Gluconeogenesis; Super-Pathways;; Autoinducer-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; ; Ubiquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;;
pfam_acc PF04452;
pfam_desc RNA methyltransferase;
pfam_id Methyltrans_RNA;
pfam_target db:Pfam-A.hmm|PF04452.14 evalue:1e-60 score:204.1 best_domain_score:203.9 name:Methyltrans_RNA;
sprot_desc Ribosomal RNA small subunit methyltransferase E;
sprot_id sp|P0AGL8|RSME_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AGL8|RSME_ECOL6 1 241 evalue:9.2e-45 qcov:99.20 identity:43.60;
tigrfam_acc TIGR00046;
tigrfam_desc RNA methyltransferase, RsmE family;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00046;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00046 evalue:1.3e-52 score:177.7 best_domain_score:177.5 name:TIGR00046;
74837 75478 CDS
ID metaerg.pl|07614
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Psychromonadaceae_A;g__Aliagarivorans;s__Aliagarivorans marinus;
genomedb_acc GCF_000429485.1;
genomedb_target db:genomedb|GCF_000429485.1|WP_026970792.1 13 212 evalue:7.5e-36 qcov:93.90 identity:43.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
tm_num 3;
74837 75478 transmembrane_helix
ID metaerg.pl|07615
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i74909-74977o75077-75145i75356-75415o;
75555 76520 CDS
ID metaerg.pl|07616
genomedb_OC d__Archaea;p__Crenarchaeota;c__Bathyarchaeia;o__TCS64;f__TCS64;g__GCA-2726865;s__GCA-2726865 sp002726865;
genomedb_acc GCA_002726865.1;
genomedb_target db:genomedb|GCA_002726865.1|MBQ03541.1 26 320 evalue:6.5e-76 qcov:91.90 identity:47.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF14505;
pfam_desc Domain of unknown function (DUF4438);
pfam_id DUF4438;
pfam_target db:Pfam-A.hmm|PF14505.6 evalue:8.1e-93 score:309.3 best_domain_score:309.1 name:DUF4438;
sp YES;
75555 75614 signal_peptide
ID metaerg.pl|07617
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
76549 77457 CDS
ID metaerg.pl|07618
allec_ids 2.1.1.-;
allgo_ids GO:0008168; GO:0005737; GO:0008276;
allko_ids K02687;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724610.1 1 296 evalue:5.2e-99 qcov:98.00 identity:59.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-5467; PWY-6477; CODH-PWY; PWY-6442; PWY-6575; PWY-4021; PWY-5041; PWY-6153; PWY-3542; ALL-CHORISMATE-PWY; PWY-5876; PWY-1061; PWY-5864; PWY-5975; PWY-5729; PWY-6113; PWY-5305; PWYG-321; PWY-1422; PWY-6151; PWY-5855; PWY-5209; PWY-5857; PWY-6303; METH-ACETATE-PWY; PWY-6154; UBISYN-PWY; PWY-6424; PWY-6142; PWY-5856; PWY-5116; PWY-1581; CO2FORM-PWY; PWY-6519; PWY-5773; PWY-5328; METHIONINE-DEG1-PWY; PWY-6427; PWY-6395; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-6292; PWY-5479; PWY-5987;
metacyc_pathway_name gramine biosynthesis;; gibberellin inactivation II (methylation);; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; autoinducer AI-2 biosynthesis I;; choline biosynthesis II;; superpathway of chorismate metabolism;; magnoflorine biosynthesis;; homogalacturonan biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; vitamin E biosynthesis (tocopherols);; S-adenosyl-L-methionine cycle I;; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; methanogenesis from acetate;; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; xanthohumol biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;;
metacyc_pathway_type INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Autotrophic-CO2-Fixation;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Autoinducer-Biosynthesis;; Choline-Biosynthesis;; Super-Pathways;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; METHANOGENESIS;; Autoinducer-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; ; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;;
pfam_acc PF03602; PF13649; PF02475; PF05175; PF06325;
pfam_desc Conserved hypothetical protein 95; Methyltransferase domain; Met-10+ like-protein; Methyltransferase small domain; Ribosomal protein L11 methyltransferase (PrmA);
pfam_id Cons_hypoth95; Methyltransf_25; Met_10; MTS; PrmA;
pfam_target db:Pfam-A.hmm|PF03602.15 evalue:8.5e-06 score:24.8 best_domain_score:23.1 name:Cons_hypoth95; db:Pfam-A.hmm|PF13649.6 evalue:1.4e-06 score:28.1 best_domain_score:26.4 name:Methyltransf_25; db:Pfam-A.hmm|PF02475.16 evalue:5.4e-05 score:22.3 best_domain_score:21.7 name:Met_10; db:Pfam-A.hmm|PF05175.14 evalue:9.1e-09 score:34.3 best_domain_score:33.5 name:MTS; db:Pfam-A.hmm|PF06325.13 evalue:3.6e-83 score:278.6 best_domain_score:278.4 name:PrmA;
sprot_desc Ribosomal protein L11 methyltransferase;
sprot_id sp|A6VCV6|PRMA_PSEA7;
sprot_target db:uniprot_sprot|sp|A6VCV6|PRMA_PSEA7 8 293 evalue:1.1e-71 qcov:94.70 identity:50.30;
tigrfam_acc TIGR00406;
tigrfam_desc ribosomal protein L11 methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name prmA;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00406 evalue:1.8e-76 score:256.5 best_domain_score:256.3 name:TIGR00406;
78356 77433 CDS
ID metaerg.pl|07619
allgo_ids GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169375.1 1 306 evalue:1.0e-139 qcov:99.70 identity:79.20;
kegg_pathway_id 00626; 00450; 00350; 00150; 00380; 00340;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tyrosine metabolism; Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF02353; PF08241; PF08242; PF13489; PF13649; PF13847; PF05148; PF01209;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Hypothetical methyltransferase; ubiE/COQ5 methyltransferase family;
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; Methyltransf_8; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:1.4e-09 score:36.9 best_domain_score:36.5 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:5e-17 score:61.6 best_domain_score:59.8 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.3e-12 score:47.6 best_domain_score:46.0 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:1.1e-13 score:50.5 best_domain_score:49.4 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.6e-17 score:63.2 best_domain_score:61.5 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:5.6e-14 score:51.4 best_domain_score:50.0 name:Methyltransf_31; db:Pfam-A.hmm|PF05148.15 evalue:1.8e-05 score:23.9 best_domain_score:20.2 name:Methyltransf_8; db:Pfam-A.hmm|PF01209.18 evalue:5.5e-06 score:25.1 best_domain_score:24.7 name:Ubie_methyltran;
78940 78407 CDS
ID metaerg.pl|07620
allec_ids 3.6.1.1;
allgo_ids GO:0000287; GO:0004427; GO:0005737; GO:0006796;
allko_ids K01507;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37931.1 1 176 evalue:7.0e-72 qcov:99.40 identity:75.10;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF00719;
pfam_desc Inorganic pyrophosphatase;
pfam_id Pyrophosphatase;
pfam_target db:Pfam-A.hmm|PF00719.19 evalue:5.2e-51 score:171.9 best_domain_score:171.7 name:Pyrophosphatase;
sprot_desc Inorganic pyrophosphatase;
sprot_id sp|Q9AC20|IPYR_CAUVC;
sprot_target db:uniprot_sprot|sp|Q9AC20|IPYR_CAUVC 1 172 evalue:2.1e-51 qcov:97.20 identity:55.80;
78996 80231 CDS
ID metaerg.pl|07621
allgo_ids GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724608.1 26 409 evalue:1.3e-172 qcov:93.40 identity:74.00;
kegg_pathway_id 00626; 00450; 00350; 00340; 00380; 00150;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tyrosine metabolism; Histidine metabolism; Tryptophan metabolism; Androgen and estrogen metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF08241; PF08242; PF13489; PF13649;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:1.6e-16 score:60.0 best_domain_score:59.1 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.1e-07 score:31.7 best_domain_score:30.7 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:2.7e-11 score:42.8 best_domain_score:42.0 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:3.1e-16 score:59.1 best_domain_score:58.1 name:Methyltransf_25;
80922 80329 CDS
ID metaerg.pl|07622
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724607.1 1 197 evalue:4.0e-07 qcov:100.00 identity:37.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
81088 81444 CDS
ID metaerg.pl|07623
allec_ids 4.1.2.50;
allgo_ids GO:0070497; GO:0046872; GO:0008616;
allko_ids K01737;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Terracidiphilus;s__Terracidiphilus sp000620725;
genomedb_acc GCF_000620725.1;
genomedb_target db:genomedb|GCF_000620725.1|WP_026447037.1 1 118 evalue:2.6e-54 qcov:100.00 identity:77.10;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF01242;
pfam_desc 6-pyruvoyl tetrahydropterin synthase;
pfam_id PTPS;
pfam_target db:Pfam-A.hmm|PF01242.19 evalue:3.2e-33 score:113.5 best_domain_score:113.4 name:PTPS;
sprot_desc 6-carboxy-5,6,7,8-tetrahydropterin synthase;
sprot_id sp|P65871|QUED_ECO57;
sprot_target db:uniprot_sprot|sp|P65871|QUED_ECO57 3 118 evalue:1.4e-43 qcov:98.30 identity:61.20;
tigrfam_acc TIGR03367;
tigrfam_desc queuosine biosynthesis protein QueD;
tigrfam_mainrole Protein synthesis;
tigrfam_name queuosine_QueD;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03367 evalue:5.6e-31 score:106.0 best_domain_score:105.7 name:TIGR03367;
81559 82125 CDS
ID metaerg.pl|07624
allec_ids 3.1.3.-;
allgo_ids GO:0016021; GO:0042577; GO:0046839;
allko_ids K01096; K12978; K06153; K22904;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__ZC4RG39;s__ZC4RG39 sp003242495;
genomedb_acc GCA_003242495.1;
genomedb_target db:genomedb|GCA_003242495.1|PZN29887.1 17 184 evalue:1.5e-48 qcov:89.40 identity:62.50;
kegg_pathway_id 00564; 00550;
kegg_pathway_name Glycerophospholipid metabolism; Peptidoglycan biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
metacyc_pathway_id PWY-5083; PWY-882; PWY-6456; PWY-5491; NADPHOS-DEPHOS-PWY;
metacyc_pathway_name NAD/NADH phosphorylation and dephosphorylation;; L-ascorbate biosynthesis I (L-galactose pathway);; serinol biosynthesis;; diethylphosphate degradation;; NAD phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; Ascorbate-Biosynthesis;; Polyamine-Biosynthesis;; Phosphorus-Compounds;; NAD-Metabolism;;
pfam_acc PF01569; PF14378;
pfam_desc PAP2 superfamily; PAP2 superfamily;
pfam_id PAP2; PAP2_3;
pfam_target db:Pfam-A.hmm|PF01569.21 evalue:1e-19 score:69.9 best_domain_score:69.1 name:PAP2; db:Pfam-A.hmm|PF14378.6 evalue:4.7e-10 score:38.7 best_domain_score:38.6 name:PAP2_3;
sprot_desc Phospholipid phosphatase 6;
sprot_id sp|Q58DI5|PLPP6_BOVIN;
sprot_target db:uniprot_sprot|sp|Q58DI5|PLPP6_BOVIN 10 173 evalue:3.1e-08 qcov:87.20 identity:31.80;
tm_num 4;
81559 82125 transmembrane_helix
ID metaerg.pl|07625
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i81676-81744o81772-81828i81925-81993o82021-82089i;
82255 84276 CDS
ID metaerg.pl|07626
allec_ids 7.2.3.-; 3.6.1.1;
allgo_ids GO:0004427; GO:0009678; GO:0016020; GO:1902600; GO:0005887; GO:0000287; GO:0030955; GO:0006814;
allko_ids K15987;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724604.1 1 673 evalue:0.0e+00 qcov:100.00 identity:91.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF03030;
pfam_desc Inorganic H+ pyrophosphatase;
pfam_id H_PPase;
pfam_target db:Pfam-A.hmm|PF03030.16 evalue:7.8e-242 score:803.8 best_domain_score:803.6 name:H_PPase;
sprot_desc Putative K(+)-stimulated pyrophosphate-energized sodium pump;
sprot_id sp|Q2RIS7|HPPA1_MOOTA;
sprot_target db:uniprot_sprot|sp|Q2RIS7|HPPA1_MOOTA 5 673 evalue:5.9e-150 qcov:99.40 identity:50.40;
tigrfam_acc TIGR01104;
tigrfam_desc V-type H(+)-translocating pyrophosphatase;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name V_PPase;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01104 evalue:2.1e-228 score:759.5 best_domain_score:759.1 name:TIGR01104;
tm_num 16;
82255 84276 transmembrane_helix
ID metaerg.pl|07627
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology o82264-82332i82414-82473o82486-82554i82615-82683o82726-82794i82930-82989o83032-83100i83134-83202o83230-83298i83359-83427o83455-83523i83632-83700o83758-83826i83947-84006o84019-84087i84217-84270o;
85035 84403 CDS
ID metaerg.pl|07628
allgo_ids GO:0051920; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726328.1 1 197 evalue:1.2e-86 qcov:93.80 identity:77.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF02627;
pfam_desc Carboxymuconolactone decarboxylase family;
pfam_id CMD;
pfam_target db:Pfam-A.hmm|PF02627.20 evalue:2.6e-09 score:36.2 best_domain_score:28.9 name:CMD;
85207 85710 CDS
ID metaerg.pl|07629
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726329.1 7 166 evalue:1.9e-55 qcov:95.80 identity:73.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF04306;
pfam_desc Protein of unknown function (DUF456);
pfam_id DUF456;
pfam_target db:Pfam-A.hmm|PF04306.13 evalue:2.8e-34 score:117.6 best_domain_score:117.6 name:DUF456;
tm_num 4;
85207 85710 transmembrane_helix
ID metaerg.pl|07630
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i85243-85347o85375-85443i85501-85569o85627-85695i;
85741 86670 CDS
ID metaerg.pl|07631
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Opitutaceae;g__Lacunisphaera;s__Lacunisphaera sp900104925;
genomedb_acc GCF_900104925.1;
genomedb_target db:genomedb|GCF_900104925.1|WP_091057256.1 10 308 evalue:2.3e-25 qcov:96.80 identity:31.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF12412;
pfam_desc Protein of unknown function (DUF3667);
pfam_id DUF3667;
pfam_target db:Pfam-A.hmm|PF12412.8 evalue:2.6e-12 score:45.3 best_domain_score:44.0 name:DUF3667;
sp YES;
tm_num 5;
85741 85812 lipoprotein_signal_peptide
ID metaerg.pl|07632
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
85741 86670 transmembrane_helix
ID metaerg.pl|07633
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
topology i85999-86067o86275-86343i86377-86445o86488-86541i86560-86628o;
87039 86692 CDS
ID metaerg.pl|07634
allgo_ids GO:0006364; GO:0005737; GO:0030490;
allko_ids K02834;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169710.1 1 115 evalue:7.1e-49 qcov:100.00 identity:89.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF02033;
pfam_desc Ribosome-binding factor A;
pfam_id RBFA;
pfam_target db:Pfam-A.hmm|PF02033.18 evalue:1.3e-27 score:95.6 best_domain_score:95.4 name:RBFA;
sprot_desc Ribosome-binding factor A;
sprot_id sp|B7KDJ9|RBFA_CYAP7;
sprot_target db:uniprot_sprot|sp|B7KDJ9|RBFA_CYAP7 4 115 evalue:8.5e-17 qcov:97.40 identity:43.00;
tigrfam_acc TIGR00082;
tigrfam_desc ribosome-binding factor A;
tigrfam_mainrole Transcription;
tigrfam_name rbfA;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR00082 evalue:8e-24 score:83.5 best_domain_score:83.4 name:TIGR00082;
89624 87036 CDS
ID metaerg.pl|07635
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0003743;
allko_ids K00860; K00956; K00955; K02519;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726331.1 1 861 evalue:0.0e+00 qcov:99.90 identity:85.50;
kegg_pathway_id 00230; 00920; 00450;
kegg_pathway_name Purine metabolism; Sulfur metabolism; Selenoamino acid metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF00025; PF00009; PF03144; PF11987; PF08364; PF04760; PF03308; PF01926;
pfam_desc ADP-ribosylation factor family; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; Translation-initiation factor 2; Bacterial translation initiation factor IF-2 associated region; Translation initiation factor IF-2, N-terminal region; Methylmalonyl Co-A mutase-associated GTPase MeaB; 50S ribosome-binding GTPase;
pfam_id Arf; GTP_EFTU; GTP_EFTU_D2; IF-2; IF2_assoc; IF2_N; MeaB; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00025.21 evalue:3.1e-06 score:26.0 best_domain_score:24.7 name:Arf; db:Pfam-A.hmm|PF00009.27 evalue:1.8e-37 score:128.0 best_domain_score:122.6 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:7.1e-08 score:32.0 best_domain_score:20.4 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF11987.8 evalue:4e-35 score:119.3 best_domain_score:118.1 name:IF-2; db:Pfam-A.hmm|PF08364.11 evalue:8.1e-15 score:54.0 best_domain_score:54.0 name:IF2_assoc; db:Pfam-A.hmm|PF04760.15 evalue:2.5e-27 score:93.7 best_domain_score:60.3 name:IF2_N; db:Pfam-A.hmm|PF03308.16 evalue:2.6e-06 score:25.8 best_domain_score:19.7 name:MeaB; db:Pfam-A.hmm|PF01926.23 evalue:7.3e-11 score:41.4 best_domain_score:40.0 name:MMR_HSR1;
sprot_desc Translation initiation factor IF-2;
sprot_id sp|B8GP02|IF2_THISH;
sprot_target db:uniprot_sprot|sp|B8GP02|IF2_THISH 1 860 evalue:3.6e-245 qcov:99.80 identity:63.50;
tigrfam_acc TIGR00231; TIGR00487;
tigrfam_desc small GTP-binding protein domain; translation initiation factor IF-2;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; IF-2;
tigrfam_sub1role General; Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:2.5e-33 score:114.3 best_domain_score:113.2 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00487 evalue:5.3e-256 score:850.1 best_domain_score:850.1 name:TIGR00487;
91163 89655 CDS
ID metaerg.pl|07636
allgo_ids GO:0003723; GO:0005829; GO:0003700; GO:0000166; GO:0006353; GO:0031564;
allko_ids K02600;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726332.1 1 502 evalue:1.7e-251 qcov:100.00 identity:90.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF14520; PF13184; PF08529; PF00575;
pfam_desc Helix-hairpin-helix domain; NusA-like KH domain; NusA N-terminal domain; S1 RNA binding domain;
pfam_id HHH_5; KH_5; NusA_N; S1;
pfam_target db:Pfam-A.hmm|PF14520.6 evalue:3.9e-13 score:49.0 best_domain_score:41.3 name:HHH_5; db:Pfam-A.hmm|PF13184.6 evalue:1.1e-28 score:98.3 best_domain_score:92.8 name:KH_5; db:Pfam-A.hmm|PF08529.11 evalue:6.8e-37 score:125.8 best_domain_score:125.8 name:NusA_N; db:Pfam-A.hmm|PF00575.23 evalue:9.7e-05 score:21.9 best_domain_score:20.5 name:S1;
sprot_desc Transcription termination/antitermination protein NusA;
sprot_id sp|Q83BS0|NUSA_COXBU;
sprot_target db:uniprot_sprot|sp|Q83BS0|NUSA_COXBU 5 502 evalue:2.3e-159 qcov:99.20 identity:60.60;
tigrfam_acc TIGR01953; TIGR01954;
tigrfam_desc transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication;
tigrfam_mainrole Transcription; Transcription;
tigrfam_name NusA; nusA_Cterm_rpt;
tigrfam_sub1role Transcription factors; Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR01953 evalue:9.1e-123 score:408.7 best_domain_score:408.3 name:TIGR01953; db:TIGRFAMs.hmm|TIGR01954 evalue:5.7e-31 score:105.5 best_domain_score:58.1 name:TIGR01954;
91679 91194 CDS
ID metaerg.pl|07637
allgo_ids GO:0005737; GO:0042274;
allko_ids K09748;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726333.1 1 156 evalue:1.9e-60 qcov:96.90 identity:74.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
pfam_acc PF02576; PF17384;
pfam_desc RimP N-terminal domain; RimP C-terminal SH3 domain;
pfam_id DUF150; DUF150_C;
pfam_target db:Pfam-A.hmm|PF02576.17 evalue:7.8e-29 score:99.1 best_domain_score:98.5 name:DUF150; db:Pfam-A.hmm|PF17384.2 evalue:6.8e-15 score:54.2 best_domain_score:53.6 name:DUF150_C;
sprot_desc Ribosome maturation factor RimP;
sprot_id sp|A1ST43|RIMP_PSYIN;
sprot_target db:uniprot_sprot|sp|A1ST43|RIMP_PSYIN 5 152 evalue:7.0e-41 qcov:91.90 identity:51.40;
91883 91807 tRNA
ID metaerg.pl|07638
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 66.5351; 0.00259443; 0.0377936; 66.7262; 0.150771;
name tRNA_Met_cat;
>Feature NODE_50_length_91350_cov_14.9262
12 4094 CDS
ID metaerg.pl|07639
allko_ids K01181; K01225; K01448; K01183; K01179;
kegg_pathway_id 00530; 00500; 00550;
kegg_pathway_name Aminosugars metabolism; Starch and sucrose metabolism; Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF01391; PF07081; PF17851; PF13385; PF00395;
pfam_desc Collagen triple helix repeat (20 copies); Protein of unknown function (DUF1349); Beta xylosidase C-terminal Concanavalin A-like domain ; Concanavalin A-like lectin/glucanases superfamily; S-layer homology domain;
pfam_id Collagen; DUF1349; GH43_C2; Laminin_G_3; SLH;
pfam_target db:Pfam-A.hmm|PF01391.18 evalue:5.6e-16 score:57.3 best_domain_score:38.9 name:Collagen; db:Pfam-A.hmm|PF07081.11 evalue:3.2e-28 score:97.9 best_domain_score:47.9 name:DUF1349; db:Pfam-A.hmm|PF17851.1 evalue:9e-27 score:93.3 best_domain_score:45.6 name:GH43_C2; db:Pfam-A.hmm|PF13385.6 evalue:1.7e-10 score:40.5 best_domain_score:37.8 name:Laminin_G_3; db:Pfam-A.hmm|PF00395.20 evalue:6.6e-32 score:108.5 best_domain_score:46.2 name:SLH;
4343 5485 CDS
ID metaerg.pl|07640
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_A;g__Bacillus_V;s__Bacillus_V massiliosenegalensis;
genomedb_acc GCF_000311725.1;
genomedb_target db:genomedb|GCF_000311725.1|WP_019155208.1 81 376 evalue:1.1e-74 qcov:77.90 identity:47.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF09084; PF13379;
pfam_desc NMT1/THI5 like; NMT1-like family;
pfam_id NMT1; NMT1_2;
pfam_target db:Pfam-A.hmm|PF09084.11 evalue:1.9e-14 score:53.4 best_domain_score:52.8 name:NMT1; db:Pfam-A.hmm|PF13379.6 evalue:2e-06 score:26.9 best_domain_score:26.3 name:NMT1_2;
sp YES;
4343 4423 lipoprotein_signal_peptide
ID metaerg.pl|07641
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
5482 6381 CDS
ID metaerg.pl|07642
allgo_ids GO:0016020; GO:0055085;
allko_ids K02050;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_J;g__OESV01;s__OESV01 sp900240995;
genomedb_acc GCF_900240995.1;
genomedb_target db:genomedb|GCF_900240995.1|WP_102346426.1 32 267 evalue:1.8e-59 qcov:78.90 identity:50.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:7.7e-16 score:57.6 best_domain_score:57.6 name:BPD_transp_1;
tm_num 7;
5482 6381 transmembrane_helix
ID metaerg.pl|07643
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
topology i5542-5610o5620-5679i5716-5784o5812-5871i5890-5943o6085-6153i6172-6240o;
6411 7217 CDS
ID metaerg.pl|07644
allgo_ids GO:0005524; GO:0016887;
allko_ids K01997; K05847; K02010; K02052; K02006; K02017; K02032; K01996; K06861; K02071; K11072; K02045; K02068; K01995; K02065; K02049; K02031; K01998; K10111; K05816; K02023; K02000;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_J;g__OESV01;s__OESV01 sp900240995;
genomedb_acc GCF_900240995.1;
genomedb_target db:genomedb|GCF_900240995.1|WP_102346425.1 19 253 evalue:5.1e-74 qcov:87.70 identity:57.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.6e-31 score:108.9 best_domain_score:108.2 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein MJ0412;
sprot_id sp|Q57855|Y412_METJA;
sprot_target db:uniprot_sprot|sp|Q57855|Y412_METJA 28 257 evalue:7.0e-46 qcov:85.80 identity:42.00;
7288 8436 CDS
ID metaerg.pl|07645
allec_ids 1.1.1.179;
allgo_ids GO:0016491; GO:0047837; GO:0051287; GO:0050661; GO:0008270; GO:0042843; GO:0051289;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668738.1 1 382 evalue:4.9e-179 qcov:100.00 identity:78.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF01408; PF02894;
pfam_desc Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain;
pfam_id GFO_IDH_MocA; GFO_IDH_MocA_C;
pfam_target db:Pfam-A.hmm|PF01408.22 evalue:3.9e-07 score:30.2 best_domain_score:27.9 name:GFO_IDH_MocA; db:Pfam-A.hmm|PF02894.17 evalue:7.9e-06 score:25.1 best_domain_score:24.0 name:GFO_IDH_MocA_C;
sprot_desc D-xylose dehydrogenase;
sprot_id sp|Q8GAK6|XDH_PAENI;
sprot_target db:uniprot_sprot|sp|Q8GAK6|XDH_PAENI 8 379 evalue:3.5e-139 qcov:97.40 identity:63.40;
8433 9593 CDS
ID metaerg.pl|07646
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora krabiensis;
genomedb_acc GCF_900091425.1;
genomedb_target db:genomedb|GCF_900091425.1|WP_091588694.1 1 385 evalue:7.0e-149 qcov:99.70 identity:70.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF06187;
pfam_desc Protein of unknown function (DUF993);
pfam_id DUF993;
pfam_target db:Pfam-A.hmm|PF06187.11 evalue:1.2e-176 score:586.5 best_domain_score:586.4 name:DUF993;
9590 10483 CDS
ID metaerg.pl|07647
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668739.1 1 294 evalue:9.5e-122 qcov:99.00 identity:75.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF01261;
pfam_desc Xylose isomerase-like TIM barrel;
pfam_id AP_endonuc_2;
pfam_target db:Pfam-A.hmm|PF01261.24 evalue:2.7e-26 score:91.5 best_domain_score:90.8 name:AP_endonuc_2;
10620 11783 CDS
ID metaerg.pl|07648
allgo_ids GO:0016021; GO:0055085;
allko_ids K08219; K08217; K00943;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus saxobsidens;
genomedb_acc GCF_002938435.1;
genomedb_target db:genomedb|GCF_002938435.1|WP_104528576.1 4 371 evalue:2.5e-58 qcov:95.10 identity:43.40;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF07690; PF05977;
pfam_desc Major Facilitator Superfamily; Transmembrane secretion effector;
pfam_id MFS_1; MFS_3;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:2.3e-43 score:147.7 best_domain_score:118.3 name:MFS_1; db:Pfam-A.hmm|PF05977.13 evalue:8.3e-56 score:188.7 best_domain_score:188.4 name:MFS_3;
tm_num 9;
10620 11783 transmembrane_helix
ID metaerg.pl|07649
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
topology i10677-10745o10803-10871i10890-10958o11085-11153i11229-11297o11340-11396i11415-11483o11493-11561i11679-11747o;
12126 11821 CDS
ID metaerg.pl|07650
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_D;g__Bacillus_L;s__Bacillus_L sp001310635;
genomedb_acc GCF_001310635.1;
genomedb_target db:genomedb|GCF_001310635.1|WP_062051861.1 17 101 evalue:5.0e-06 qcov:84.20 identity:40.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF11213;
pfam_desc Protein of unknown function (DUF3006);
pfam_id DUF3006;
pfam_target db:Pfam-A.hmm|PF11213.8 evalue:1.9e-11 score:43.2 best_domain_score:42.9 name:DUF3006;
13154 12123 CDS
ID metaerg.pl|07651
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Marinococcaceae;g__C254;s__C254 sp002797315;
genomedb_acc GCF_002797315.1;
genomedb_target db:genomedb|GCF_002797315.1|WP_100401232.1 94 343 evalue:2.6e-70 qcov:72.90 identity:52.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF00753; PF12706;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:3.9e-17 score:62.1 best_domain_score:62.1 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:1.8e-09 score:36.6 best_domain_score:35.8 name:Lactamase_B_2;
14010 13402 CDS
ID metaerg.pl|07652
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Modestobacter;s__Modestobacter caceresii;
genomedb_acc GCF_000761485.1;
genomedb_target db:genomedb|GCF_000761485.1|WP_036336281.1 38 193 evalue:1.1e-25 qcov:77.20 identity:44.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF00188;
pfam_desc Cysteine-rich secretory protein family;
pfam_id CAP;
pfam_target db:Pfam-A.hmm|PF00188.26 evalue:7.1e-15 score:55.2 best_domain_score:54.7 name:CAP;
sp YES;
tm_num 1;
13402 13482 signal_peptide
ID metaerg.pl|07653
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
14010 13402 transmembrane_helix
ID metaerg.pl|07654
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
topology i13420-13473o;
14178 14744 CDS
ID metaerg.pl|07655
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp000805335;
genomedb_acc GCF_000805335.1;
genomedb_target db:genomedb|GCF_000805335.1|WP_043267709.1 9 184 evalue:2.6e-48 qcov:93.60 identity:56.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF04343;
pfam_desc Protein of unknown function, DUF488;
pfam_id DUF488;
pfam_target db:Pfam-A.hmm|PF04343.13 evalue:1.3e-24 score:86.3 best_domain_score:86.0 name:DUF488;
15341 14790 CDS
ID metaerg.pl|07656
allgo_ids GO:0016491; GO:0055114;
allko_ids K00384;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Amycolatopsis_C;s__Amycolatopsis_C halophila;
genomedb_acc GCF_000504245.1;
genomedb_target db:genomedb|GCF_000504245.1|WP_034270286.1 1 181 evalue:4.9e-52 qcov:98.90 identity:59.70;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF13454; PF07992;
pfam_desc FAD-NAD(P)-binding; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id NAD_binding_9; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF13454.6 evalue:3.2e-05 score:23.2 best_domain_score:15.9 name:NAD_binding_9; db:Pfam-A.hmm|PF07992.14 evalue:1.2e-15 score:56.8 best_domain_score:39.3 name:Pyr_redox_2;
16977 15754 CDS
ID metaerg.pl|07657
allgo_ids GO:0016788;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667671.1 6 393 evalue:1.1e-67 qcov:95.30 identity:40.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF06259; PF05057; PF07819;
pfam_desc Alpha/beta hydrolase; Putative serine esterase (DUF676); PGAP1-like protein;
pfam_id Abhydrolase_8; DUF676; PGAP1;
pfam_target db:Pfam-A.hmm|PF06259.12 evalue:9.6e-05 score:21.3 best_domain_score:20.3 name:Abhydrolase_8; db:Pfam-A.hmm|PF05057.14 evalue:1.8e-06 score:26.8 best_domain_score:25.2 name:DUF676; db:Pfam-A.hmm|PF07819.13 evalue:4.6e-07 score:29.0 best_domain_score:28.2 name:PGAP1;
18181 17192 CDS
ID metaerg.pl|07658
allec_ids 1.-.-.-;
allgo_ids GO:0016705; GO:0055114;
allko_ids K00517;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus;s__Rhodococcus gordoniae;
genomedb_acc GCF_001646655.1;
genomedb_target db:genomedb|GCF_001646655.1|WP_064062747.1 1 327 evalue:1.2e-125 qcov:99.40 identity:71.60;
kegg_pathway_id 00361; 00940; 00626; 00903;
kegg_pathway_name gamma-Hexachlorocyclohexane degradation; Phenylpropanoid biosynthesis; Naphthalene and anthracene degradation; Limonene and pinene degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
metacyc_pathway_id PWY-5826; PWY-2821; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5987; PWY-5479;
metacyc_pathway_name hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:4.5e-40 score:137.2 best_domain_score:136.7 name:Bac_luciferase;
sprot_desc Luciferase-like monooxygenase;
sprot_id sp|P0ADV6|YHBW_ECOL6;
sprot_target db:uniprot_sprot|sp|P0ADV6|YHBW_ECOL6 2 329 evalue:7.7e-71 qcov:99.70 identity:46.50;
tigrfam_acc TIGR03558;
tigrfam_desc luciferase family oxidoreductase, group 1;
tigrfam_mainrole Unknown function;
tigrfam_name oxido_grp_1;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR03558 evalue:3.2e-115 score:383.9 best_domain_score:383.8 name:TIGR03558;
19589 18399 CDS
ID metaerg.pl|07659
allec_ids 2.5.1.-; 4.2.99.-;
allgo_ids GO:0009058; GO:0030170; GO:0016765; GO:0071266; GO:0071268;
allko_ids K01740; K10764;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665209.1 6 394 evalue:1.9e-173 qcov:98.20 identity:77.50;
kegg_pathway_id 00272; 00271;
kegg_pathway_name Cysteine metabolism; Methionine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
metacyc_pathway_id PWY-6403; PWY-5817; PWY-5134; PWY-6520; PWY-5899; PWY-5838; PWY-5064; PWY-4502; PWY-5027; PWY-5893; PWY-6383; PWY-6129; PWY-5133; PWY-5864; PWY-6263; PWY-5132; PWY-5808; PWY-5897; POLYISOPRENSYN-PWY; PWY-5805; PWY-5783; PWY-724; PWY-5861; PWY-6262; PWY-5806; PWY-6404; PWY-5135; PWY-5140; PWY-5701; PWY-5068; PWY-2681; PWY-5896; PWY-5862; PWY-5845; PWY-5816; PWY-5863; PWY-5898; PWY-6406;
metacyc_pathway_name carrageenan biosynthesis;; dodecaprenyl diphosphate biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; lupulone and humulone biosynthesis;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; polyisoprenoid biosynthesis (E. coli);; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; demethylmenaquinol-8 biosynthesis II;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; xanthohumol biosynthesis;; cannabinoid biosynthesis;; shikonin biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-12 biosynthesis;; salicylate biosynthesis I;;
metacyc_pathway_type Polysaccharides-Biosynthesis;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Lipid-Biosynthesis;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Polyprenyl-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; PRENYLFLAVONOID-SYN;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Salicylate-Biosynthesis;;
pfam_acc PF00155; PF01053; PF01041;
pfam_desc Aminotransferase class I and II; Cys/Met metabolism PLP-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; Cys_Met_Meta_PP; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1.4e-06 score:27.0 best_domain_score:25.8 name:Aminotran_1_2; db:Pfam-A.hmm|PF01053.20 evalue:1.1e-132 score:441.5 best_domain_score:441.3 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF01041.17 evalue:2.8e-06 score:26.1 best_domain_score:21.9 name:DegT_DnrJ_EryC1;
sprot_desc O-succinylhomoserine sulfhydrylase;
sprot_id sp|P9WGB4|METZ_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WGB4|METZ_MYCTO 14 394 evalue:1.9e-148 qcov:96.20 identity:67.50;
tigrfam_acc TIGR01325;
tigrfam_desc O-succinylhomoserine sulfhydrylase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name O_suc_HS_sulf;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01325 evalue:3.3e-187 score:620.8 best_domain_score:620.7 name:TIGR01325;
19771 19586 CDS
ID metaerg.pl|07660
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Beutenbergiaceae;g__Ruania;s__Ruania albidiflava;
genomedb_acc GCF_000421225.1;
genomedb_target db:genomedb|GCF_000421225.1|WP_084481507.1 5 59 evalue:1.2e-10 qcov:90.20 identity:65.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF08410;
pfam_desc Domain of unknown function (DUF1737);
pfam_id DUF1737;
pfam_target db:Pfam-A.hmm|PF08410.10 evalue:5.6e-17 score:60.6 best_domain_score:60.3 name:DUF1737;
20586 19897 CDS
ID metaerg.pl|07661
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
21620 20814 CDS
ID metaerg.pl|07662
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
sp YES;
20814 20870 lipoprotein_signal_peptide
ID metaerg.pl|07663
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
21887 23662 CDS
ID metaerg.pl|07664
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K08252; K01728; K08847; K01769; K04443; K04367; K12321; K04372; K04688; K08853; K13414; K02486; K12323; K13303; K05121; K13304; K05688; K07675; K08841; K02178; K04373; K08792; K08809; K05112; K05098; K04421; K04420; K08850; K01768; K08286; K02480; K05091; K04445; K12320; K05097; K05096; K08848; K11889; K04444; K05105; K08846; K05744; K08854; K08790; K11228; K08897; K08333; K05102; K08856; K08282; K08855; K05103; K07682; K04424; K05743; K00924; K13302; K03407; K11265; K07673; K07778; K07683; K08810; K05113; K12319; K12318; K12324; K08884; K05111; K04442; K11623;
kegg_pathway_id 00230; 04510; 04360; 04111; 04640; 04530; 04140; 05012; 00040; 04150; 04110; 02020; 04011; 04010;
kegg_pathway_name Purine metabolism; Focal adhesion; Axon guidance; Cell cycle - yeast; Hematopoietic cell lineage; Tight junction; Regulation of autophagy; Parkinson's disease; Pentose and glucuronate interconversions; mTOR signaling pathway; Cell cycle; Two-component system - General; MAPK signaling pathway - yeast; MAPK signaling pathway;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF14041; PF00069; PF07714;
pfam_desc LppP/LprE lipoprotein; Protein kinase domain; Protein tyrosine kinase;
pfam_id Lipoprotein_21; Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF14041.6 evalue:3e-18 score:65.0 best_domain_score:64.0 name:Lipoprotein_21; db:Pfam-A.hmm|PF00069.25 evalue:1.7e-38 score:131.8 best_domain_score:131.3 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:1.4e-27 score:95.9 best_domain_score:95.4 name:Pkinase_Tyr;
tm_num 1;
21887 23662 transmembrane_helix
ID metaerg.pl|07665
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
topology i22871-22939o;
24616 23693 CDS
ID metaerg.pl|07666
allgo_ids GO:0055114;
allko_ids K00001;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Aeromicrobium;s__Aeromicrobium sp000471045;
genomedb_acc GCF_000471045.1;
genomedb_target db:genomedb|GCF_000471045.1|WP_023647290.1 1 304 evalue:1.9e-85 qcov:99.00 identity:54.90;
kegg_pathway_id 00071; 00350; 00120; 00641; 00624; 00010;
kegg_pathway_name Fatty acid metabolism; Tyrosine metabolism; Bile acid biosynthesis; 3-Chloroacrylic acid degradation; 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF08240; PF00107; PF13602;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N; ADH_zinc_N_2;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:3e-10 score:39.2 best_domain_score:37.4 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:3.2e-12 score:45.8 best_domain_score:45.1 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:9.6e-12 score:45.3 best_domain_score:44.6 name:ADH_zinc_N_2;
25398 25054 CDS
ID metaerg.pl|07667
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
25877 29887 CDS
ID metaerg.pl|07668
allgo_ids GO:0030246;
allko_ids K01728;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Isoptericola;s__Isoptericola halotolerans;
genomedb_acc GCF_003003075.1;
genomedb_target db:genomedb|GCF_003003075.1|WP_106266302.1 185 1151 evalue:0.0e+00 qcov:72.40 identity:57.00;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF16990; PF03422; PF06439; PF18099; PF07691;
pfam_desc Carbohydrate binding module (family 35); Carbohydrate binding module (family 6); Domain of Unknown Function (DUF1080); DUF5010 C-terminal domain; PA14 domain;
pfam_id CBM_35; CBM_6; DUF1080; DUF5010_C; PA14;
pfam_target db:Pfam-A.hmm|PF16990.5 evalue:5e-23 score:80.9 best_domain_score:55.1 name:CBM_35; db:Pfam-A.hmm|PF03422.15 evalue:3.4e-18 score:65.4 best_domain_score:34.4 name:CBM_6; db:Pfam-A.hmm|PF06439.11 evalue:1.6e-35 score:122.1 best_domain_score:120.9 name:DUF1080; db:Pfam-A.hmm|PF18099.1 evalue:6.9e-11 score:41.5 best_domain_score:19.7 name:DUF5010_C; db:Pfam-A.hmm|PF07691.12 evalue:2.9e-16 score:58.8 best_domain_score:56.2 name:PA14;
sp YES;
tm_num 1;
25877 25990 signal_peptide
ID metaerg.pl|07669
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
25877 29887 transmembrane_helix
ID metaerg.pl|07670
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
topology i25922-25990o;
30245 30003 CDS
ID metaerg.pl|07671
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
tm_num 2;
30245 30003 transmembrane_helix
ID metaerg.pl|07672
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
topology o30045-30113i30150-30218o;
30495 30695 CDS
ID metaerg.pl|07673
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666286.1 2 66 evalue:4.9e-18 qcov:98.50 identity:75.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF07311;
pfam_desc Dodecin;
pfam_id Dodecin;
pfam_target db:Pfam-A.hmm|PF07311.12 evalue:1.2e-22 score:79.2 best_domain_score:79.1 name:Dodecin;
31162 30725 CDS
ID metaerg.pl|07674
allec_ids 3.1.-.-;
allgo_ids GO:0000287; GO:0004540;
allko_ids K07064;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp003248605;
genomedb_acc GCA_003248605.1;
genomedb_target db:genomedb|GCA_003248605.1|PZU40357.1 1 129 evalue:1.4e-33 qcov:89.00 identity:64.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01850; PF13470;
pfam_desc PIN domain; PIN domain;
pfam_id PIN; PIN_3;
pfam_target db:Pfam-A.hmm|PF01850.21 evalue:6.6e-17 score:61.4 best_domain_score:61.1 name:PIN; db:Pfam-A.hmm|PF13470.6 evalue:2.8e-06 score:27.3 best_domain_score:26.8 name:PIN_3;
sprot_desc Ribonuclease VapC7;
sprot_id sp|P9WFB2|VAPC7_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WFB2|VAPC7_MYCTO 1 140 evalue:8.2e-25 qcov:96.60 identity:52.80;
31413 31159 CDS
ID metaerg.pl|07675
allgo_ids GO:0006355; GO:0005886;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycolicibacter;s__Mycolicibacter sinensis_A;
genomedb_acc GCF_001667375.1;
genomedb_target db:genomedb|GCF_001667375.1|WP_019736076.1 6 84 evalue:4.6e-13 qcov:94.00 identity:53.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF01402;
pfam_desc Ribbon-helix-helix protein, copG family;
pfam_id RHH_1;
pfam_target db:Pfam-A.hmm|PF01402.21 evalue:5.3e-06 score:25.4 best_domain_score:20.5 name:RHH_1;
sprot_desc Putative antitoxin VapB7;
sprot_id sp|O06777|VAPB7_MYCTU;
sprot_target db:uniprot_sprot|sp|O06777|VAPB7_MYCTU 1 84 evalue:9.3e-13 qcov:100.00 identity:50.00;
33704 31431 CDS
ID metaerg.pl|07676
allec_ids 3.1.11.5;
allgo_ids GO:0005524; GO:0009338; GO:0004003; GO:0003677; GO:0008854; GO:0000724;
allko_ids K03581;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__Bog-473;s__Bog-473 sp003169235;
genomedb_acc GCA_003169235.1;
genomedb_target db:genomedb|GCA_003169235.1|PMPX01000044.1_17 107 756 evalue:1.4e-156 qcov:85.90 identity:51.90;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF13086; PF13245; PF13401; PF13604; PF05127; PF02562; PF00580; PF13538; PF01443;
pfam_desc AAA domain; AAA domain; AAA domain; AAA domain; Helicase; PhoH-like protein; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain; Viral (Superfamily 1) RNA helicase;
pfam_id AAA_11; AAA_19; AAA_22; AAA_30; Helicase_RecD; PhoH; UvrD-helicase; UvrD_C_2; Viral_helicase1;
pfam_target db:Pfam-A.hmm|PF13086.6 evalue:1.3e-12 score:47.3 best_domain_score:22.6 name:AAA_11; db:Pfam-A.hmm|PF13245.6 evalue:1.1e-29 score:102.9 best_domain_score:101.6 name:AAA_19; db:Pfam-A.hmm|PF13401.6 evalue:1.4e-10 score:40.8 best_domain_score:39.8 name:AAA_22; db:Pfam-A.hmm|PF13604.6 evalue:1.5e-33 score:115.4 best_domain_score:109.1 name:AAA_30; db:Pfam-A.hmm|PF05127.14 evalue:2.1e-10 score:39.9 best_domain_score:39.3 name:Helicase_RecD; db:Pfam-A.hmm|PF02562.16 evalue:2.7e-05 score:22.9 best_domain_score:21.9 name:PhoH; db:Pfam-A.hmm|PF00580.21 evalue:3.3e-08 score:32.6 best_domain_score:29.9 name:UvrD-helicase; db:Pfam-A.hmm|PF13538.6 evalue:2.8e-16 score:58.3 best_domain_score:56.3 name:UvrD_C_2; db:Pfam-A.hmm|PF01443.18 evalue:6.5e-11 score:41.6 best_domain_score:17.2 name:Viral_helicase1;
sprot_desc RecBCD enzyme subunit RecD;
sprot_id sp|A0QS28|RECD_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QS28|RECD_MYCS2 113 746 evalue:9.3e-104 qcov:83.80 identity:42.00;
tigrfam_acc TIGR01447;
tigrfam_desc exodeoxyribonuclease V, alpha subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name recD;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01447 evalue:9.3e-145 score:482.7 best_domain_score:482.4 name:TIGR01447;
37261 33701 CDS
ID metaerg.pl|07677
allec_ids 3.1.11.5;
allgo_ids GO:0005524; GO:0004003; GO:0003677; GO:0008854; GO:0000287; GO:0000724;
allko_ids K03582;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442013.1 3 1183 evalue:2.3e-267 qcov:99.60 identity:50.00;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF13245; PF13604; PF12705; PF00580; PF13361; PF13538;
pfam_desc AAA domain; AAA domain; PD-(D/E)XK nuclease superfamily; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain; UvrD-like helicase C-terminal domain;
pfam_id AAA_19; AAA_30; PDDEXK_1; UvrD-helicase; UvrD_C; UvrD_C_2;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:3e-22 score:78.7 best_domain_score:77.4 name:AAA_19; db:Pfam-A.hmm|PF13604.6 evalue:3.3e-08 score:32.7 best_domain_score:15.9 name:AAA_30; db:Pfam-A.hmm|PF12705.7 evalue:1.5e-05 score:24.3 best_domain_score:21.3 name:PDDEXK_1; db:Pfam-A.hmm|PF00580.21 evalue:1.7e-54 score:184.7 best_domain_score:180.5 name:UvrD-helicase; db:Pfam-A.hmm|PF13361.6 evalue:1.1e-13 score:50.6 best_domain_score:31.8 name:UvrD_C; db:Pfam-A.hmm|PF13538.6 evalue:1.3e-09 score:36.9 best_domain_score:18.2 name:UvrD_C_2;
sprot_desc RecBCD enzyme subunit RecB;
sprot_id sp|P9WMQ2|RECB_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WMQ2|RECB_MYCTO 12 1184 evalue:9.5e-196 qcov:98.90 identity:41.10;
tigrfam_acc TIGR00609;
tigrfam_desc exodeoxyribonuclease V, beta subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name recB;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00609 evalue:2.2e-215 score:717.4 best_domain_score:585.4 name:TIGR00609;
40704 37258 CDS
ID metaerg.pl|07678
allec_ids 3.1.11.5;
allgo_ids GO:0005618; GO:0009338; GO:0005576; GO:0005886; GO:0005524; GO:0004003; GO:0003677; GO:0008854; GO:0006310; GO:0000724;
allko_ids K03583;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__Bog-473;s__Bog-473 sp003160635;
genomedb_acc GCA_003160635.1;
genomedb_target db:genomedb|GCA_003160635.1|PMLV01000077.1_82 3 1140 evalue:1.0e-301 qcov:99.10 identity:51.20;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF04257; PF17946;
pfam_desc Exodeoxyribonuclease V, gamma subunit ; RecC C-terminal domain;
pfam_id Exonuc_V_gamma; RecC_C;
pfam_target db:Pfam-A.hmm|PF04257.14 evalue:1.7e-207 score:690.5 best_domain_score:690.1 name:Exonuc_V_gamma; db:Pfam-A.hmm|PF17946.1 evalue:1.9e-42 score:144.6 best_domain_score:144.6 name:RecC_C;
sprot_desc RecBCD enzyme subunit RecC;
sprot_id sp|P9WIQ5|RECC_MYCTU;
sprot_target db:uniprot_sprot|sp|P9WIQ5|RECC_MYCTU 1 1140 evalue:8.1e-208 qcov:99.30 identity:41.80;
tigrfam_acc TIGR01450;
tigrfam_desc exodeoxyribonuclease V, gamma subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name recC;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01450 evalue:1e-246 score:820.8 best_domain_score:820.5 name:TIGR01450;
42279 40849 CDS
ID metaerg.pl|07679
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Kitasatospora;s__Kitasatospora sp001905045;
genomedb_acc GCF_001905045.1;
genomedb_target db:genomedb|GCF_001905045.1|WP_073928831.1 2 475 evalue:1.9e-127 qcov:99.60 identity:53.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF13191; PF03008;
pfam_desc AAA ATPase domain; Archaea bacterial proteins of unknown function;
pfam_id AAA_16; DUF234;
pfam_target db:Pfam-A.hmm|PF13191.6 evalue:2.4e-10 score:40.3 best_domain_score:37.8 name:AAA_16; db:Pfam-A.hmm|PF03008.14 evalue:6.1e-11 score:41.9 best_domain_score:41.2 name:DUF234;
42704 42366 CDS
ID metaerg.pl|07680
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Kitasatospora;s__Kitasatospora griseola;
genomedb_acc GCF_000836635.1;
genomedb_target db:genomedb|GCF_000836635.1|WP_043915025.1 12 110 evalue:4.1e-17 qcov:88.40 identity:52.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF09664;
pfam_desc Protein of unknown function C-terminus (DUF2399);
pfam_id DUF2399;
pfam_target db:Pfam-A.hmm|PF09664.10 evalue:9.6e-26 score:89.8 best_domain_score:89.5 name:DUF2399;
42836 45481 CDS
ID metaerg.pl|07681
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium heckeshornense;
genomedb_acc GCF_001881585.2;
genomedb_target db:genomedb|GCF_001881585.2|WP_048890377.1 18 880 evalue:1.1e-67 qcov:98.00 identity:30.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF09722; PF02810;
pfam_desc Protein of unknown function (DUF2384); SEC-C motif;
pfam_id DUF2384; SEC-C;
pfam_target db:Pfam-A.hmm|PF09722.10 evalue:2.5e-05 score:23.4 best_domain_score:21.1 name:DUF2384; db:Pfam-A.hmm|PF02810.15 evalue:2.3e-10 score:39.5 best_domain_score:38.9 name:SEC-C;
45808 45548 CDS
ID metaerg.pl|07682
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666479.1 1 86 evalue:8.5e-31 qcov:100.00 identity:82.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF05016;
pfam_desc #=GF GA 21.90; 21.90;;
pfam_id ParE_toxin;
pfam_target db:Pfam-A.hmm|PF05016.15 evalue:4.1e-12 score:45.8 best_domain_score:45.6 name:ParE_toxin;
46089 45808 CDS
ID metaerg.pl|07683
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441512.1 1 92 evalue:2.4e-39 qcov:98.90 identity:92.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF02604;
pfam_desc Antitoxin Phd_YefM, type II toxin-antitoxin system;
pfam_id PhdYeFM_antitox;
pfam_target db:Pfam-A.hmm|PF02604.19 evalue:2.2e-22 score:77.9 best_domain_score:77.4 name:PhdYeFM_antitox;
tigrfam_acc TIGR01552;
tigrfam_desc prevent-host-death family protein;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name phd_fam;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01552 evalue:2.2e-18 score:64.5 best_domain_score:63.7 name:TIGR01552;
47107 46163 CDS
ID metaerg.pl|07684
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0005737; GO:0007049; GO:0051301; GO:0007059;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669018.1 2 308 evalue:1.9e-80 qcov:97.80 identity:55.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF00589; PF14659;
pfam_desc Phage integrase family; Phage integrase, N-terminal SAM-like domain;
pfam_id Phage_integrase; Phage_int_SAM_3;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:3.9e-25 score:87.8 best_domain_score:86.8 name:Phage_integrase; db:Pfam-A.hmm|PF14659.6 evalue:2.6e-07 score:30.1 best_domain_score:29.4 name:Phage_int_SAM_3;
sprot_desc Tyrosine recombinase XerC-like;
sprot_id sp|Q8R890|XERCL_CALS4;
sprot_target db:uniprot_sprot|sp|Q8R890|XERCL_CALS4 1 307 evalue:2.5e-18 qcov:97.80 identity:23.50;
47455 47646 CDS
ID metaerg.pl|07685
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
sp YES;
tm_num 1;
47455 47523 signal_peptide
ID metaerg.pl|07686
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
47455 47646 transmembrane_helix
ID metaerg.pl|07687
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
topology i47467-47535o;
48009 47785 CDS
ID metaerg.pl|07688
allec_ids 3.4.21.88;
allgo_ids GO:0003677; GO:0006355; GO:0004252; GO:0006281; GO:0006260; GO:0045892; GO:0009432;
allko_ids K01356;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442015.1 3 69 evalue:4.8e-14 qcov:90.50 identity:64.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF09339; PF01726; PF12802;
pfam_desc IclR helix-turn-helix domain; LexA DNA binding domain; MarR family;
pfam_id HTH_IclR; LexA_DNA_bind; MarR_2;
pfam_target db:Pfam-A.hmm|PF09339.10 evalue:4.7e-07 score:28.8 best_domain_score:28.2 name:HTH_IclR; db:Pfam-A.hmm|PF01726.16 evalue:3.7e-22 score:77.1 best_domain_score:76.9 name:LexA_DNA_bind; db:Pfam-A.hmm|PF12802.7 evalue:4.9e-07 score:28.8 best_domain_score:28.5 name:MarR_2;
sprot_desc LexA repressor;
sprot_id sp|B8FWD3|LEXA_DESHD;
sprot_target db:uniprot_sprot|sp|B8FWD3|LEXA_DESHD 3 69 evalue:1.7e-10 qcov:90.50 identity:43.30;
48761 48357 CDS
ID metaerg.pl|07689
genomedb_OC d__Bacteria;p__Myxococcota;c__Polyangia;o__Palsa-1104;f__Fen-1088;g__Fen-1137;s__Fen-1137 sp003158455;
genomedb_acc GCA_003158455.1;
genomedb_target db:genomedb|GCA_003158455.1|PMJO01000012.1_10 1 133 evalue:3.6e-28 qcov:99.30 identity:54.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF01850;
pfam_desc PIN domain;
pfam_id PIN;
pfam_target db:Pfam-A.hmm|PF01850.21 evalue:1e-13 score:51.1 best_domain_score:50.9 name:PIN;
49021 48758 CDS
ID metaerg.pl|07690
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000113.1_5 2 87 evalue:5.4e-17 qcov:98.90 identity:62.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF02604;
pfam_desc Antitoxin Phd_YefM, type II toxin-antitoxin system;
pfam_id PhdYeFM_antitox;
pfam_target db:Pfam-A.hmm|PF02604.19 evalue:7.4e-12 score:44.1 best_domain_score:43.9 name:PhdYeFM_antitox;
tigrfam_acc TIGR01552;
tigrfam_desc prevent-host-death family protein;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name phd_fam;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01552 evalue:1e-12 score:46.3 best_domain_score:46.0 name:TIGR01552;
49326 49556 CDS
ID metaerg.pl|07691
allgo_ids GO:0043565;
allko_ids K00517; K00891; K01486; K00012;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__UBA8190;g__PALSA-743;s__PALSA-743 sp003151955;
genomedb_acc GCA_003151955.1;
genomedb_target db:genomedb|GCA_003151955.1|PLZB01000006.1_36 1 71 evalue:3.3e-10 qcov:93.40 identity:49.30;
kegg_pathway_id 00520; 00626; 00361; 00230; 00940; 00400; 00500; 00903; 00040;
kegg_pathway_name Nucleotide sugars metabolism; Naphthalene and anthracene degradation; gamma-Hexachlorocyclohexane degradation; Purine metabolism; Phenylpropanoid biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Starch and sucrose metabolism; Limonene and pinene degradation; Pentose and glucuronate interconversions;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF01381; PF13560; PF13744;
pfam_desc Helix-turn-helix; Helix-turn-helix domain; Helix-turn-helix domain;
pfam_id HTH_3; HTH_31; HTH_37;
pfam_target db:Pfam-A.hmm|PF01381.22 evalue:1.4e-12 score:46.7 best_domain_score:46.4 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:1.1e-10 score:40.9 best_domain_score:40.6 name:HTH_31; db:Pfam-A.hmm|PF13744.6 evalue:4.4e-07 score:29.0 best_domain_score:28.6 name:HTH_37;
49556 50839 CDS
ID metaerg.pl|07692
allec_ids 2.-.-.-;
allgo_ids GO:0016301;
allko_ids K07154;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Palsa-688;g__Fen-671;s__Fen-671 sp003166025;
genomedb_acc GCA_003166025.1;
genomedb_target db:genomedb|GCA_003166025.1|PMWT01000068.1_84 4 422 evalue:4.6e-85 qcov:98.10 identity:43.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
metacyc_pathway_id LPSSYN-PWY; LIPA-CORESYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF13657; PF07804;
pfam_desc HipA N-terminal domain; HipA-like C-terminal domain;
pfam_id Couple_hipA; HipA_C;
pfam_target db:Pfam-A.hmm|PF13657.6 evalue:3.1e-18 score:65.5 best_domain_score:64.5 name:Couple_hipA; db:Pfam-A.hmm|PF07804.12 evalue:1.9e-44 score:151.1 best_domain_score:150.8 name:HipA_C;
sprot_desc Putative kinase Y4mE;
sprot_id sp|P55564|Y4ME_SINFN;
sprot_target db:uniprot_sprot|sp|P55564|Y4ME_SINFN 1 336 evalue:1.3e-49 qcov:78.70 identity:37.90;
tigrfam_acc TIGR03071;
tigrfam_desc HipA N-terminal domain;
tigrfam_name couple_hipA;
tigrfam_target db:TIGRFAMs.hmm|TIGR03071 evalue:1e-19 score:69.7 best_domain_score:68.8 name:TIGR03071;
50979 51620 CDS
ID metaerg.pl|07693
allgo_ids GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Dermatophilaceae;g__Ornithinimicrobium;s__Ornithinimicrobium pekingense_A;
genomedb_acc GCF_900221015.1;
genomedb_target db:genomedb|GCF_900221015.1|WP_097187136.1 18 200 evalue:3.1e-34 qcov:85.90 identity:47.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF12840; PF09339; PF12802; PF01909;
pfam_desc Helix-turn-helix domain; IclR helix-turn-helix domain; MarR family; Nucleotidyltransferase domain;
pfam_id HTH_20; HTH_IclR; MarR_2; NTP_transf_2;
pfam_target db:Pfam-A.hmm|PF12840.7 evalue:6.1e-07 score:28.6 best_domain_score:27.5 name:HTH_20; db:Pfam-A.hmm|PF09339.10 evalue:3.7e-05 score:22.7 best_domain_score:21.9 name:HTH_IclR; db:Pfam-A.hmm|PF12802.7 evalue:5.8e-11 score:41.4 best_domain_score:40.1 name:MarR_2; db:Pfam-A.hmm|PF01909.23 evalue:1.6e-05 score:24.3 best_domain_score:23.6 name:NTP_transf_2;
51620 52159 CDS
ID metaerg.pl|07694
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
52280 53059 CDS
ID metaerg.pl|07695
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
53414 55555 CDS
ID metaerg.pl|07696
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas sp001429255;
genomedb_acc GCA_001429255.1;
genomedb_target db:genomedb|GCA_001429255.1|KRD43900.1 10 713 evalue:1.1e-126 qcov:98.70 identity:39.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF03235; PF18755;
pfam_desc Protein of unknown function DUF262; Restriction Enzyme Adenine Methylase Associated;
pfam_id DUF262; RAMA;
pfam_target db:Pfam-A.hmm|PF03235.14 evalue:3.3e-27 score:95.3 best_domain_score:94.5 name:DUF262; db:Pfam-A.hmm|PF18755.1 evalue:1.5e-11 score:43.9 best_domain_score:42.6 name:RAMA;
56728 56027 CDS
ID metaerg.pl|07697
allgo_ids GO:0004519;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Noviherbaspirillum;s__Noviherbaspirillum denitrificans;
genomedb_acc GCF_002211445.1;
genomedb_target db:genomedb|GCF_002211445.1|WP_088710472.1 1 233 evalue:8.9e-75 qcov:100.00 identity:58.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF01939;
pfam_desc Endonuclease NucS;
pfam_id NucS;
pfam_target db:Pfam-A.hmm|PF01939.16 evalue:1.7e-09 score:36.6 best_domain_score:36.1 name:NucS;
57362 57048 CDS
ID metaerg.pl|07698
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Faecalibacterium;s__Faecalibacterium sp002160895;
genomedb_acc GCF_002160895.1;
genomedb_target db:genomedb|GCF_002160895.1|WP_087382119.1 9 104 evalue:5.5e-24 qcov:92.30 identity:60.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
57897 58499 CDS
ID metaerg.pl|07699
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669046.1 1 200 evalue:2.3e-15 qcov:100.00 identity:40.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
tm_num 1;
57897 58499 transmembrane_helix
ID metaerg.pl|07700
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
topology o57909-57968i;
58550 59497 CDS
ID metaerg.pl|07701
genomedb_OC d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__SM23-33;f__FEN-1343;g__FEN-1343;s__FEN-1343 sp003171335;
genomedb_acc GCA_003171335.1;
genomedb_target db:genomedb|GCA_003171335.1|PMYD01000057.1_13 7 303 evalue:2.1e-47 qcov:94.30 identity:41.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
60688 61599 CDS
ID metaerg.pl|07702
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF08378;
pfam_desc Nuclease-related domain;
pfam_id NERD;
pfam_target db:Pfam-A.hmm|PF08378.11 evalue:2.4e-11 score:43.3 best_domain_score:42.3 name:NERD;
sp YES;
tm_num 1;
60688 60759 signal_peptide
ID metaerg.pl|07703
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
60688 61599 transmembrane_helix
ID metaerg.pl|07704
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
topology i60691-60759o;
61780 62046 CDS
ID metaerg.pl|07705
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__UBA7541;f__UBA7541;g__UBA7541;s__UBA7541 sp003223295;
genomedb_acc GCA_003223295.1;
genomedb_target db:genomedb|GCA_003223295.1|PYT92546.1 2 75 evalue:3.0e-23 qcov:84.10 identity:72.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
62167 62580 CDS
ID metaerg.pl|07706
allgo_ids GO:0005524; GO:0016301;
allko_ids K05715;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669724.1 10 122 evalue:4.4e-29 qcov:82.50 identity:58.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF06414;
pfam_desc Zeta toxin;
pfam_id Zeta_toxin;
pfam_target db:Pfam-A.hmm|PF06414.12 evalue:8e-08 score:31.0 best_domain_score:30.7 name:Zeta_toxin;
62780 63286 CDS
ID metaerg.pl|07707
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Bog-793;g__Palsa-601;s__Palsa-601 sp003136185;
genomedb_acc GCA_003136185.1;
genomedb_target db:genomedb|GCA_003136185.1|PLDN01000002.1_6 5 156 evalue:4.7e-41 qcov:90.50 identity:58.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF12728;
pfam_desc Helix-turn-helix domain;
pfam_id HTH_17;
pfam_target db:Pfam-A.hmm|PF12728.7 evalue:4.3e-09 score:35.7 best_domain_score:34.9 name:HTH_17;
tigrfam_acc TIGR01764;
tigrfam_desc DNA binding domain, excisionase family;
tigrfam_mainrole Unknown function;
tigrfam_name excise;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR01764 evalue:1.4e-11 score:43.7 best_domain_score:43.1 name:TIGR01764;
63851 64192 CDS
ID metaerg.pl|07708
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Agrococcus;s__Agrococcus baldri;
genomedb_acc GCF_900114805.1;
genomedb_target db:genomedb|GCF_900114805.1|WP_092919173.1 11 106 evalue:6.1e-21 qcov:85.00 identity:52.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
64474 64226 CDS
ID metaerg.pl|07709
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nanopelagicales;f__S36-B12;g__S36-B12;s__S36-B12 sp002728915;
genomedb_acc GCA_002728915.1;
genomedb_target db:genomedb|GCA_002728915.1|MBR93772.1 1 77 evalue:1.4e-14 qcov:93.90 identity:55.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
64713 64414 CDS
ID metaerg.pl|07710
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nanopelagicales;f__S36-B12;g__S36-B12;s__S36-B12 sp002728915;
genomedb_acc GCA_002728915.1;
genomedb_target db:genomedb|GCA_002728915.1|MBR93772.1 1 76 evalue:6.2e-17 qcov:76.80 identity:63.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
66775 64982 CDS
ID metaerg.pl|07711
allgo_ids GO:0008270;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Bin134;g__Bin134;s__Bin134 sp002239105;
genomedb_acc GCA_002239105.1;
genomedb_target db:genomedb|GCA_002239105.1|MPNQ01000050.1_9 1 597 evalue:1.2e-126 qcov:100.00 identity:44.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF04434;
pfam_desc SWIM zinc finger;
pfam_id SWIM;
pfam_target db:Pfam-A.hmm|PF04434.17 evalue:2.9e-06 score:26.1 best_domain_score:26.1 name:SWIM;
68267 66804 CDS
ID metaerg.pl|07712
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442330.1 41 483 evalue:2.3e-149 qcov:91.00 identity:60.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF07929; PF03682;
pfam_desc Plasmid pRiA4b ORF-3-like protein; Uncharacterised protein family (UPF0158);
pfam_id PRiA4_ORF3; UPF0158;
pfam_target db:Pfam-A.hmm|PF07929.11 evalue:4.2e-12 score:45.3 best_domain_score:44.3 name:PRiA4_ORF3; db:Pfam-A.hmm|PF03682.13 evalue:1.1e-06 score:27.9 best_domain_score:27.1 name:UPF0158;
68459 69751 CDS
ID metaerg.pl|07713
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycolicibacterium;s__Mycolicibacterium sp000382405;
genomedb_acc GCF_000382405.1;
genomedb_target db:genomedb|GCF_000382405.1|WP_026357107.1 1 430 evalue:1.9e-102 qcov:100.00 identity:49.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
sp YES;
68459 68554 signal_peptide
ID metaerg.pl|07714
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
69755 70138 CDS
ID metaerg.pl|07715
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Arthrobacter_C;s__Arthrobacter_C castelli;
genomedb_acc GCF_000430705.1;
genomedb_target db:genomedb|GCF_000430705.1|WP_051299229.1 4 127 evalue:1.5e-28 qcov:97.60 identity:53.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
70579 70989 CDS
ID metaerg.pl|07716
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
sp YES;
tm_num 1;
70579 70650 signal_peptide
ID metaerg.pl|07717
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
70579 70989 transmembrane_helix
ID metaerg.pl|07718
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
topology i70591-70659o;
71247 72539 CDS
ID metaerg.pl|07719
allgo_ids GO:0016021; GO:0055085;
allko_ids K08217; K08219;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Saccharomonospora_A;s__Saccharomonospora_A marina;
genomedb_acc GCF_000244955.1;
genomedb_target db:genomedb|GCF_000244955.1|WP_009154292.1 12 426 evalue:7.4e-67 qcov:96.50 identity:44.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:2.8e-25 score:88.2 best_domain_score:49.2 name:MFS_1;
tm_num 12;
71247 72539 transmembrane_helix
ID metaerg.pl|07720
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
topology i71358-71426o71454-71522i71541-71609o71622-71690i71727-71786o71814-71882i72000-72068o72096-72164i72198-72266o72276-72344i72378-72446o72456-72524i;
72878 72573 CDS
ID metaerg.pl|07721
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
73049 74110 CDS
ID metaerg.pl|07722
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides simplex;
genomedb_acc GCF_900114845.1;
genomedb_target db:genomedb|GCF_900114845.1|WP_082003815.1 6 353 evalue:7.7e-62 qcov:98.60 identity:43.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF08378;
pfam_desc Nuclease-related domain;
pfam_id NERD;
pfam_target db:Pfam-A.hmm|PF08378.11 evalue:4.3e-13 score:48.9 best_domain_score:48.3 name:NERD;
75503 74172 CDS
ID metaerg.pl|07723
allgo_ids GO:0009190; GO:0016849; GO:0035556;
allko_ids K08282; K01259; K08884; K11265; K07673; K01768; K05345;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Variovorax;s__Variovorax sp900101545;
genomedb_acc GCF_900101545.1;
genomedb_target db:genomedb|GCF_900101545.1|WP_093110318.1 8 439 evalue:1.7e-138 qcov:97.50 identity:56.80;
kegg_pathway_id 00230; 02020; 00330;
kegg_pathway_name Purine metabolism; Two-component system - General; Arginine and proline metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF00561; PF00211; PF12146;
pfam_desc alpha/beta hydrolase fold; Adenylate and Guanylate cyclase catalytic domain; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Guanylate_cyc; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:1.9e-18 score:66.2 best_domain_score:61.9 name:Abhydrolase_1; db:Pfam-A.hmm|PF00211.20 evalue:1.6e-09 score:36.9 best_domain_score:33.4 name:Guanylate_cyc; db:Pfam-A.hmm|PF12146.8 evalue:1.4e-13 score:49.9 best_domain_score:46.7 name:Hydrolase_4;
75715 77226 CDS
ID metaerg.pl|07724
allko_ids K08852; K11715;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441633.1 2 500 evalue:8.3e-110 qcov:99.20 identity:48.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF01011; PF13360; PF13570;
pfam_desc PQQ enzyme repeat; PQQ-like domain; PQQ-like domain;
pfam_id PQQ; PQQ_2; PQQ_3;
pfam_target db:Pfam-A.hmm|PF01011.21 evalue:3.4e-06 score:26.0 best_domain_score:12.8 name:PQQ; db:Pfam-A.hmm|PF13360.6 evalue:3.4e-14 score:52.2 best_domain_score:38.2 name:PQQ_2; db:Pfam-A.hmm|PF13570.6 evalue:8e-06 score:25.4 best_domain_score:19.9 name:PQQ_3;
sp YES;
75715 75765 lipoprotein_signal_peptide
ID metaerg.pl|07725
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
77625 77296 CDS
ID metaerg.pl|07726
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Palsa-506;s__Palsa-506 sp003168215;
genomedb_acc GCA_003168215.1;
genomedb_target db:genomedb|GCA_003168215.1|PMSW01000058.1_3 3 107 evalue:3.5e-29 qcov:96.30 identity:65.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF18480;
pfam_desc Domain of unknown function (DUF5615);
pfam_id DUF5615;
pfam_target db:Pfam-A.hmm|PF18480.1 evalue:1.2e-16 score:59.4 best_domain_score:59.0 name:DUF5615;
78041 77622 CDS
ID metaerg.pl|07727
allgo_ids GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666796.1 4 138 evalue:2.2e-44 qcov:97.10 identity:73.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF01402;
pfam_desc Ribbon-helix-helix protein, copG family;
pfam_id RHH_1;
pfam_target db:Pfam-A.hmm|PF01402.21 evalue:0.00014 score:20.9 best_domain_score:20.9 name:RHH_1;
78864 78202 CDS
ID metaerg.pl|07728
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes;s__Actinoplanes regularis;
genomedb_acc GCF_900188005.1;
genomedb_target db:genomedb|GCF_900188005.1|WP_089297376.1 17 177 evalue:3.4e-31 qcov:73.20 identity:44.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF09684;
pfam_desc Phage tail protein (Tail_P2_I);
pfam_id Tail_P2_I;
pfam_target db:Pfam-A.hmm|PF09684.10 evalue:1.5e-07 score:30.6 best_domain_score:30.3 name:Tail_P2_I;
tigrfam_acc TIGR02242;
tigrfam_desc phage tail protein domain;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name tail_TIGR02242;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02242 evalue:1.8e-21 score:75.7 best_domain_score:75.1 name:TIGR02242;
80795 78861 CDS
ID metaerg.pl|07729
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes;s__Actinoplanes subtropicus;
genomedb_acc GCF_000721705.1;
genomedb_target db:genomedb|GCF_000721705.1|WP_030435313.1 1 644 evalue:1.1e-207 qcov:100.00 identity:55.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF04865;
pfam_desc Baseplate J-like protein;
pfam_id Baseplate_J;
pfam_target db:Pfam-A.hmm|PF04865.14 evalue:1.9e-19 score:69.1 best_domain_score:60.6 name:Baseplate_J;
tigrfam_acc TIGR02243;
tigrfam_desc putative baseplate assembly protein;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name TIGR02243;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02243 evalue:1.6e-139 score:465.6 best_domain_score:465.3 name:TIGR02243;
81204 80767 CDS
ID metaerg.pl|07730
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Kibdelosporangium;s__Kibdelosporangium phytohabitans;
genomedb_acc GCF_001302585.1;
genomedb_target db:genomedb|GCF_001302585.1|WP_054293345.1 6 134 evalue:2.8e-42 qcov:89.00 identity:62.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF04965;
pfam_desc Gene 25-like lysozyme;
pfam_id GPW_gp25;
pfam_target db:Pfam-A.hmm|PF04965.14 evalue:1.3e-22 score:78.6 best_domain_score:78.4 name:GPW_gp25;
81608 81201 CDS
ID metaerg.pl|07731
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5704;f__UBA5704;g__UBA5704;s__UBA5704 sp002420005;
genomedb_acc GCA_002420005.1;
genomedb_target db:genomedb|GCA_002420005.1|DIHE01000203.1_25 1 124 evalue:3.3e-37 qcov:91.90 identity:66.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF05488;
pfam_desc PAAR motif;
pfam_id PAAR_motif;
pfam_target db:Pfam-A.hmm|PF05488.13 evalue:5e-13 score:48.3 best_domain_score:34.7 name:PAAR_motif;
83279 81624 CDS
ID metaerg.pl|07732
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp000716335;
genomedb_acc GCF_000716335.1;
genomedb_target db:genomedb|GCF_000716335.1|WP_031077808.1 1 551 evalue:7.8e-162 qcov:100.00 identity:54.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF05954;
pfam_desc Phage late control gene D protein (GPD);
pfam_id Phage_GPD;
pfam_target db:Pfam-A.hmm|PF05954.11 evalue:7.6e-16 score:57.5 best_domain_score:56.8 name:Phage_GPD;
83943 83272 CDS
ID metaerg.pl|07733
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis balhimycina;
genomedb_acc GCF_000384295.1;
genomedb_target db:genomedb|GCF_000384295.1|WP_020647182.1 3 217 evalue:2.5e-66 qcov:96.40 identity:57.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
85187 83943 CDS
ID metaerg.pl|07734
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF13699;
pfam_desc Domain of unknown function (DUF4157);
pfam_id DUF4157;
pfam_target db:Pfam-A.hmm|PF13699.6 evalue:3.6e-06 score:26.3 best_domain_score:26.3 name:DUF4157;
86211 85747 CDS
ID metaerg.pl|07735
allgo_ids GO:0005198;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis balhimycina;
genomedb_acc GCF_000384295.1;
genomedb_target db:genomedb|GCF_000384295.1|WP_020647180.1 7 151 evalue:1.6e-51 qcov:94.20 identity:64.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF06841;
pfam_desc T4-like virus tail tube protein gp19;
pfam_id Phage_T4_gp19;
pfam_target db:Pfam-A.hmm|PF06841.12 evalue:1.5e-36 score:124.5 best_domain_score:124.2 name:Phage_T4_gp19;
tigrfam_acc TIGR02241;
tigrfam_desc conserved hypothetical phage tail region protein;
tigrfam_name TIGR02241;
tigrfam_target db:TIGRFAMs.hmm|TIGR02241 evalue:6.3e-32 score:109.4 best_domain_score:109.3 name:TIGR02241;
86389 86204 CDS
ID metaerg.pl|07736
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas sp001898185;
genomedb_acc GCA_001898185.1;
genomedb_target db:genomedb|GCA_001898185.1|OJV58973.1 8 57 evalue:3.7e-12 qcov:82.00 identity:70.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
86754 86395 CDS
ID metaerg.pl|07737
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis balhimycina;
genomedb_acc GCF_000384295.1;
genomedb_target db:genomedb|GCF_000384295.1|WP_020647178.1 1 116 evalue:4.9e-37 qcov:97.50 identity:68.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
87182 86751 CDS
ID metaerg.pl|07738
allgo_ids GO:0005198;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2979;f__UBA2979;g__W-Chloroflexi-9;s__W-Chloroflexi-9 sp002840675;
genomedb_acc GCA_002840675.1;
genomedb_target db:genomedb|GCA_002840675.1|PKN78296.1 1 143 evalue:1.2e-50 qcov:100.00 identity:67.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF06841;
pfam_desc T4-like virus tail tube protein gp19;
pfam_id Phage_T4_gp19;
pfam_target db:Pfam-A.hmm|PF06841.12 evalue:8.7e-41 score:138.2 best_domain_score:138.0 name:Phage_T4_gp19;
tigrfam_acc TIGR02241;
tigrfam_desc conserved hypothetical phage tail region protein;
tigrfam_name TIGR02241;
tigrfam_target db:TIGRFAMs.hmm|TIGR02241 evalue:4.1e-34 score:116.5 best_domain_score:116.4 name:TIGR02241;
88889 87216 CDS
ID metaerg.pl|07739
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp001425175;
genomedb_acc GCF_001425175.1;
genomedb_target db:genomedb|GCF_001425175.1|WP_056157448.1 1 548 evalue:1.4e-163 qcov:98.40 identity:55.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF04984; PF17482;
pfam_desc Phage tail sheath protein subtilisin-like domain; Phage tail sheath C-terminal domain;
pfam_id Phage_sheath_1; Phage_sheath_1C;
pfam_target db:Pfam-A.hmm|PF04984.14 evalue:1.2e-30 score:105.8 best_domain_score:105.1 name:Phage_sheath_1; db:Pfam-A.hmm|PF17482.2 evalue:1.5e-21 score:75.6 best_domain_score:74.8 name:Phage_sheath_1C;
89232 88906 CDS
ID metaerg.pl|07740
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes;s__Actinoplanes globisporus;
genomedb_acc GCF_000379645.1;
genomedb_target db:genomedb|GCF_000379645.1|WP_026206704.1 1 105 evalue:7.7e-13 qcov:97.20 identity:43.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
90739 89756 CDS
ID metaerg.pl|07741
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.705; 0.0721711; 0.0969408; 24.4442; 0.0916667;
pfam_acc PF13699;
pfam_desc Domain of unknown function (DUF4157);
pfam_id DUF4157;
pfam_target db:Pfam-A.hmm|PF13699.6 evalue:5.9e-33 score:112.2 best_domain_score:92.8 name:DUF4157;
>Feature NODE_51_length_91149_cov_8.26025
136 3264 CDS
ID metaerg.pl|07742
allgo_ids GO:0009279; GO:0005615; GO:0016021; GO:0019867; GO:0004181; GO:2001070; GO:0006518; GO:0016485; GO:0005983;
allko_ids K21573;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133247.1 1 1042 evalue:0.0e+00 qcov:100.00 identity:93.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF13715; PF13620; PF07715; PF00593;
pfam_desc CarboxypepD_reg-like domain; Carboxypeptidase regulatory-like domain; TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id CarbopepD_reg_2; CarboxypepD_reg; Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:9.9e-17 score:60.0 best_domain_score:58.9 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF13620.6 evalue:8.1e-10 score:38.1 best_domain_score:36.7 name:CarboxypepD_reg; db:Pfam-A.hmm|PF07715.15 evalue:1.1e-22 score:79.8 best_domain_score:79.8 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:2.1e-23 score:83.2 best_domain_score:83.2 name:TonB_dep_Rec;
sp YES;
sprot_desc TonB-dependent receptor SusC;
sprot_id sp|Q8A1G1|SUSC_BACTN;
sprot_target db:uniprot_sprot|sp|Q8A1G1|SUSC_BACTN 2 978 evalue:1.6e-66 qcov:93.80 identity:25.90;
tigrfam_acc TIGR04056; TIGR04057;
tigrfam_desc TonB-linked outer membrane protein, SusC/RagA family; TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name OMP_RagA_SusC; SusC_RagA_signa;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR04056 evalue:1.8e-191 score:638.1 best_domain_score:637.9 name:TIGR04056; db:TIGRFAMs.hmm|TIGR04057 evalue:3.6e-17 score:61.0 best_domain_score:60.1 name:TIGR04057;
136 204 signal_peptide
ID metaerg.pl|07743
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
3298 4869 CDS
ID metaerg.pl|07744
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133246.1 1 523 evalue:5.7e-287 qcov:100.00 identity:91.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF12741; PF12771;
pfam_desc Susd and RagB outer membrane lipoprotein ; Starch-binding associating with outer membrane;
pfam_id SusD-like; SusD-like_2;
pfam_target db:Pfam-A.hmm|PF12741.7 evalue:8.6e-56 score:189.1 best_domain_score:184.0 name:SusD-like; db:Pfam-A.hmm|PF12771.7 evalue:8.7e-77 score:258.0 best_domain_score:257.8 name:SusD-like_2;
sp YES;
3298 3357 lipoprotein_signal_peptide
ID metaerg.pl|07745
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
4932 6080 CDS
ID metaerg.pl|07746
allec_ids 3.2.1.14;
allgo_ids GO:0005975; GO:0005576; GO:0030246; GO:0008061; GO:0004568; GO:0006032; GO:0000272;
allko_ids K01183;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133245.1 8 382 evalue:3.9e-176 qcov:98.20 identity:79.70;
kegg_pathway_id 00530;
kegg_pathway_name Aminosugars metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF00704;
pfam_desc Glycosyl hydrolases family 18;
pfam_id Glyco_hydro_18;
pfam_target db:Pfam-A.hmm|PF00704.28 evalue:2.5e-81 score:273.1 best_domain_score:272.9 name:Glyco_hydro_18;
sp YES;
sprot_desc Chitinase A1;
sprot_id sp|P20533|CHIA1_BACCI;
sprot_target db:uniprot_sprot|sp|P20533|CHIA1_BACCI 1 365 evalue:2.5e-65 qcov:95.50 identity:35.40;
4932 4991 lipoprotein_signal_peptide
ID metaerg.pl|07747
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
6153 7169 CDS
ID metaerg.pl|07748
allgo_ids GO:0043565; GO:0005524; GO:0003677; GO:0003910; GO:0006310; GO:0006281; GO:0006355;
allko_ids K02525;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133376.1 1 338 evalue:1.4e-158 qcov:100.00 identity:84.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01381; PF00356; PF00532; PF13377; PF13407;
pfam_desc Helix-turn-helix; Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of LacI family; Periplasmic binding protein-like domain; Periplasmic binding protein domain;
pfam_id HTH_3; LacI; Peripla_BP_1; Peripla_BP_3; Peripla_BP_4;
pfam_target db:Pfam-A.hmm|PF01381.22 evalue:1.7e-05 score:24.1 best_domain_score:23.1 name:HTH_3; db:Pfam-A.hmm|PF00356.21 evalue:4.7e-12 score:44.7 best_domain_score:43.5 name:LacI; db:Pfam-A.hmm|PF00532.21 evalue:5.3e-16 score:58.1 best_domain_score:57.7 name:Peripla_BP_1; db:Pfam-A.hmm|PF13377.6 evalue:2.1e-23 score:82.7 best_domain_score:81.4 name:Peripla_BP_3; db:Pfam-A.hmm|PF13407.6 evalue:4e-15 score:55.3 best_domain_score:54.5 name:Peripla_BP_4;
sprot_desc HTH-type transcriptional regulator KdgR;
sprot_id sp|P50844|KDGR_BACSU;
sprot_target db:uniprot_sprot|sp|P50844|KDGR_BACSU 7 315 evalue:6.3e-36 qcov:91.40 identity:31.70;
7314 8204 CDS
ID metaerg.pl|07749
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133244.1 1 293 evalue:2.0e-108 qcov:99.00 identity:64.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF00480;
pfam_desc ROK family;
pfam_id ROK;
pfam_target db:Pfam-A.hmm|PF00480.20 evalue:1.6e-12 score:46.7 best_domain_score:29.0 name:ROK;
9568 8228 CDS
ID metaerg.pl|07750
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133243.1 1 442 evalue:1.0e-196 qcov:99.10 identity:74.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01569;
pfam_desc PAP2 superfamily;
pfam_id PAP2;
pfam_target db:Pfam-A.hmm|PF01569.21 evalue:4.8e-14 score:51.5 best_domain_score:50.2 name:PAP2;
sp YES;
8228 8299 signal_peptide
ID metaerg.pl|07751
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
12858 9574 CDS
ID metaerg.pl|07752
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133242.1 1 1094 evalue:0.0e+00 qcov:100.00 identity:80.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01839; PF07593; PF13517;
pfam_desc FG-GAP repeat; ASPIC and UnbV; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella;
pfam_id FG-GAP; UnbV_ASPIC; VCBS;
pfam_target db:Pfam-A.hmm|PF01839.23 evalue:3.6e-26 score:90.2 best_domain_score:18.9 name:FG-GAP; db:Pfam-A.hmm|PF07593.12 evalue:1.2e-18 score:66.0 best_domain_score:65.2 name:UnbV_ASPIC; db:Pfam-A.hmm|PF13517.6 evalue:5.4e-76 score:250.4 best_domain_score:50.5 name:VCBS;
sp YES;
9574 9636 signal_peptide
ID metaerg.pl|07753
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
14133 12895 CDS
ID metaerg.pl|07754
allgo_ids GO:0005737; GO:0003677; GO:0042802; GO:0046872; GO:0005975; GO:0006351;
allko_ids K00845; K15545;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133241.1 1 412 evalue:2.3e-211 qcov:100.00 identity:92.00;
kegg_pathway_id 00500; 00521; 00052; 00010;
kegg_pathway_name Starch and sucrose metabolism; Streptomycin biosynthesis; Galactose metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF00480;
pfam_desc ROK family;
pfam_id ROK;
pfam_target db:Pfam-A.hmm|PF00480.20 evalue:9.6e-46 score:155.8 best_domain_score:155.4 name:ROK;
sprot_desc hypothetical protein;
sprot_id sp|P50456|MLC_ECOLI;
sprot_target db:uniprot_sprot|sp|P50456|MLC_ECOLI 89 406 evalue:2.9e-22 qcov:77.20 identity:26.40;
15675 14317 CDS
ID metaerg.pl|07755
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133375.1 1 452 evalue:1.8e-188 qcov:100.00 identity:72.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
sp YES;
tm_num 1;
14317 14397 signal_peptide
ID metaerg.pl|07756
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
15675 14317 transmembrane_helix
ID metaerg.pl|07757
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology i14329-14397o;
17737 16145 CDS
ID metaerg.pl|07758
allko_ids K00689;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133239.1 1 530 evalue:1.6e-300 qcov:100.00 identity:91.30;
kegg_pathway_id 02020; 00500;
kegg_pathway_name Two-component system - General; Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF07661;
pfam_desc MORN repeat variant;
pfam_id MORN_2;
pfam_target db:Pfam-A.hmm|PF07661.13 evalue:5.9e-25 score:83.7 best_domain_score:14.1 name:MORN_2;
sp YES;
16145 16213 signal_peptide
ID metaerg.pl|07759
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
18380 17823 CDS
ID metaerg.pl|07760
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133238.1 1 184 evalue:1.3e-49 qcov:99.50 identity:54.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
19378 18380 CDS
ID metaerg.pl|07761
allec_ids 2.3.1.180;
allgo_ids GO:0004315; GO:0006633; GO:0005737; GO:0033818;
allko_ids K00648;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133237.1 1 332 evalue:4.1e-182 qcov:100.00 identity:96.40;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id PWY-5156; PWY-6519; FASYN-INITIAL-PWY; BIOTIN-BIOSYNTHESIS-PWY; PWY-6285; PWY-6113; PWY0-881; PWY-4381;
metacyc_pathway_name superpathway of fatty acid biosynthesis II (plant);; 8-amino-7-oxononanoate biosynthesis I;; superpathway of fatty acid biosynthesis initiation (E. coli);; biotin biosynthesis I;; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; fatty acid biosynthesis initiation I;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; 7-Keto-8-aminopelargonate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF08545; PF08541; PF00195;
pfam_desc 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; Chalcone and stilbene synthases, N-terminal domain;
pfam_id ACP_syn_III; ACP_syn_III_C; Chal_sti_synt_N;
pfam_target db:Pfam-A.hmm|PF08545.10 evalue:3.1e-28 score:96.7 best_domain_score:96.7 name:ACP_syn_III; db:Pfam-A.hmm|PF08541.10 evalue:1.4e-33 score:114.2 best_domain_score:110.3 name:ACP_syn_III_C; db:Pfam-A.hmm|PF00195.19 evalue:2e-05 score:23.4 best_domain_score:22.4 name:Chal_sti_synt_N;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] synthase 3;
sprot_id sp|A1U0E3|FABH_MARHV;
sprot_target db:uniprot_sprot|sp|A1U0E3|FABH_MARHV 1 332 evalue:5.2e-75 qcov:100.00 identity:47.00;
tigrfam_acc TIGR00747;
tigrfam_desc 3-oxoacyl-[acyl-carrier-protein] synthase III;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabH;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00747 evalue:2.3e-108 score:361.2 best_domain_score:361.0 name:TIGR00747;
20375 19476 CDS
ID metaerg.pl|07762
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133236.1 1 299 evalue:4.9e-142 qcov:100.00 identity:78.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:3.2e-20 score:72.2 best_domain_score:70.6 name:Lactamase_B;
21073 20375 CDS
ID metaerg.pl|07763
allec_ids 3.4.-.-;
allgo_ids GO:0003677; GO:0008233; GO:0009432;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133235.1 1 232 evalue:1.9e-117 qcov:100.00 identity:89.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF02586;
pfam_desc SOS response associated peptidase (SRAP);
pfam_id SRAP;
pfam_target db:Pfam-A.hmm|PF02586.14 evalue:1.3e-62 score:210.4 best_domain_score:210.3 name:SRAP;
sprot_desc SOS response-associated protein YoqW;
sprot_id sp|O31916|YOQW_BACSU;
sprot_target db:uniprot_sprot|sp|O31916|YOQW_BACSU 1 217 evalue:9.4e-47 qcov:93.50 identity:42.80;
22056 21097 CDS
ID metaerg.pl|07764
allec_ids 3.1.1.23;
allgo_ids GO:0001669; GO:0016021; GO:0036126; GO:0097524; GO:0047372; GO:0042562; GO:0016298; GO:0034338; GO:0003707; GO:0007340; GO:0046464; GO:0044255; GO:0051792; GO:0051793; GO:0030336; GO:0032570; GO:0009611; GO:0048240; GO:0043401;
allko_ids K13697;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133234.1 1 319 evalue:1.0e-166 qcov:100.00 identity:87.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id LIPAS-PWY;
metacyc_pathway_name triacylglycerol degradation;;
metacyc_pathway_type Fatty-Acid-and-Lipid-Degradation;;
pfam_acc PF00561; PF12146;
pfam_desc alpha/beta hydrolase fold; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:1.4e-13 score:50.3 best_domain_score:45.6 name:Abhydrolase_1; db:Pfam-A.hmm|PF12146.8 evalue:2.5e-10 score:39.2 best_domain_score:36.0 name:Hydrolase_4;
sprot_desc Monoacylglycerol lipase ABHD2;
sprot_id sp|Q5EA42|ABHD2_BOVIN;
sprot_target db:uniprot_sprot|sp|Q5EA42|ABHD2_BOVIN 2 314 evalue:1.1e-24 qcov:98.10 identity:25.40;
22181 23869 CDS
ID metaerg.pl|07765
allec_ids 2.3.1.12;
allgo_ids GO:0016746; GO:0005759; GO:0005739; GO:0045254; GO:0004742; GO:0042802; GO:0000166; GO:0034604; GO:0006086; GO:0006006; GO:0030431; GO:0006099;
allko_ids K00382; K00162; K00163; K00658; K09699; K11381; K00627;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133233.1 1 562 evalue:1.2e-263 qcov:100.00 identity:87.40;
kegg_pathway_id 00650; 00620; 00252; 00020; 00260; 00290; 00310; 00010; 00280;
kegg_pathway_name Butanoate metabolism; Pyruvate metabolism; Alanine and aspartate metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Valine, leucine and isoleucine biosynthesis; Lysine degradation; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id PWY-5464; PYRUVDEHYD-PWY; PWY-5173;
metacyc_pathway_name superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; pyruvate decarboxylation to acetyl CoA;; superpathway of acetyl-CoA biosynthesis;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Acetyl-CoA-Biosynthesis; Super-Pathways;;
pfam_acc PF00198; PF00364; PF13533; PF02817; PF07831;
pfam_desc 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme; Biotin-lipoyl like; e3 binding domain; Pyrimidine nucleoside phosphorylase C-terminal domain;
pfam_id 2-oxoacid_dh; Biotin_lipoyl; Biotin_lipoyl_2; E3_binding; PYNP_C;
pfam_target db:Pfam-A.hmm|PF00198.23 evalue:1.8e-84 score:282.1 best_domain_score:281.6 name:2-oxoacid_dh; db:Pfam-A.hmm|PF00364.22 evalue:2e-40 score:135.7 best_domain_score:74.1 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:1.9e-12 score:46.1 best_domain_score:22.4 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF02817.17 evalue:1.8e-14 score:53.0 best_domain_score:51.9 name:E3_binding; db:Pfam-A.hmm|PF07831.13 evalue:0.00012 score:20.9 best_domain_score:7.9 name:PYNP_C;
sprot_desc Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial;
sprot_id sp|P08461|ODP2_RAT;
sprot_target db:uniprot_sprot|sp|P08461|ODP2_RAT 5 562 evalue:2.2e-86 qcov:99.30 identity:43.20;
tigrfam_acc TIGR01349;
tigrfam_desc pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase;
tigrfam_mainrole Energy metabolism;
tigrfam_name PDHac_trf_mito;
tigrfam_sub1role Pyruvate dehydrogenase;
tigrfam_target db:TIGRFAMs.hmm|TIGR01349 evalue:3.1e-175 score:582.7 best_domain_score:485.1 name:TIGR01349;
24181 24723 CDS
ID metaerg.pl|07766
allec_ids 3.4.25.2;
allgo_ids GO:0004298; GO:0005839; GO:0051603; GO:0009376; GO:0046872;
allko_ids K01419;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133232.1 1 178 evalue:2.3e-86 qcov:98.90 identity:96.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF00227;
pfam_desc Proteasome subunit;
pfam_id Proteasome;
pfam_target db:Pfam-A.hmm|PF00227.26 evalue:6.1e-26 score:90.3 best_domain_score:89.0 name:Proteasome;
sprot_desc ATP-dependent protease subunit HslV;
sprot_id sp|Q11UQ9|HSLV_CYTH3;
sprot_target db:uniprot_sprot|sp|Q11UQ9|HSLV_CYTH3 1 176 evalue:2.2e-67 qcov:97.80 identity:75.00;
tigrfam_acc TIGR03692;
tigrfam_desc ATP-dependent protease HslVU, peptidase subunit;
tigrfam_mainrole Protein fate;
tigrfam_name ATP_dep_HslV;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR03692 evalue:4.8e-78 score:259.9 best_domain_score:259.7 name:TIGR03692;
24973 25632 CDS
ID metaerg.pl|07767
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133374.1 6 219 evalue:2.7e-105 qcov:97.70 identity:88.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF17931;
pfam_desc Tetracyclin repressor-like, C-terminal domain;
pfam_id TetR_C_23;
pfam_target db:Pfam-A.hmm|PF17931.1 evalue:3.4e-46 score:155.7 best_domain_score:155.7 name:TetR_C_23;
25638 26987 CDS
ID metaerg.pl|07768
allec_ids 2.7.-.-;
allgo_ids GO:0005743; GO:0005739; GO:0005524; GO:0016301; GO:0015996; GO:0010224; GO:0006744;
allko_ids K08869;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133231.1 1 449 evalue:5.8e-240 qcov:100.00 identity:92.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF03109; PF01636;
pfam_desc ABC1 family; Phosphotransferase enzyme family;
pfam_id ABC1; APH;
pfam_target db:Pfam-A.hmm|PF03109.16 evalue:4.2e-23 score:81.0 best_domain_score:80.1 name:ABC1; db:Pfam-A.hmm|PF01636.23 evalue:2.4e-07 score:30.1 best_domain_score:29.4 name:APH;
sprot_desc hypothetical protein;
sprot_id sp|Q9SBB2|ABC1_ARATH;
sprot_target db:uniprot_sprot|sp|Q9SBB2|ABC1_ARATH 1 348 evalue:5.5e-27 qcov:77.50 identity:28.00;
28217 27072 CDS
ID metaerg.pl|07769
allgo_ids GO:0016021; GO:0003824;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133373.1 1 381 evalue:3.3e-212 qcov:100.00 identity:90.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF07995;
pfam_desc Glucose / Sorbosone dehydrogenase;
pfam_id GSDH;
pfam_target db:Pfam-A.hmm|PF07995.11 evalue:4.1e-21 score:74.9 best_domain_score:69.5 name:GSDH;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|O51055|Y024_BORBU;
sprot_target db:uniprot_sprot|sp|O51055|Y024_BORBU 35 379 evalue:1.2e-51 qcov:90.60 identity:31.30;
27072 27134 lipoprotein_signal_peptide
ID metaerg.pl|07770
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
28333 30255 CDS
ID metaerg.pl|07771
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0003677; GO:0004832; GO:0006438;
allko_ids K02006; K02052; K01997; K02010; K05847; K02017; K05776; K02071; K06861; K01996; K02045; K11072; K10111; K01998; K01995; K02049; K02193; K05816; K09687; K02013; K02023; K01990; K02000; K06158;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133229.1 1 640 evalue:0.0e+00 qcov:100.00 identity:90.20;
kegg_pathway_id 02010; 00910;
kegg_pathway_name ABC transporters - General; Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF13304; PF13555; PF00005; PF16326; PF12848; PF01926; PF05496; PF02463;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; P-loop containing region of AAA domain; ABC transporter; ABC transporter C-terminal domain; ABC transporter; 50S ribosome-binding GTPase; Holliday junction DNA helicase RuvB P-loop domain; RecF/RecN/SMC N terminal domain;
pfam_id AAA_21; AAA_29; ABC_tran; ABC_tran_CTD; ABC_tran_Xtn; MMR_HSR1; RuvB_N; SMC_N;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:9.3e-15 score:54.4 best_domain_score:16.9 name:AAA_21; db:Pfam-A.hmm|PF13555.6 evalue:2.7e-07 score:29.5 best_domain_score:14.5 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:8.9e-46 score:155.0 best_domain_score:83.5 name:ABC_tran; db:Pfam-A.hmm|PF16326.5 evalue:3.7e-10 score:39.2 best_domain_score:39.2 name:ABC_tran_CTD; db:Pfam-A.hmm|PF12848.7 evalue:1.9e-28 score:97.6 best_domain_score:97.6 name:ABC_tran_Xtn; db:Pfam-A.hmm|PF01926.23 evalue:8.7e-06 score:25.0 best_domain_score:11.8 name:MMR_HSR1; db:Pfam-A.hmm|PF05496.12 evalue:5e-05 score:22.3 best_domain_score:13.0 name:RuvB_N; db:Pfam-A.hmm|PF02463.19 evalue:1.5e-11 score:43.4 best_domain_score:21.6 name:SMC_N;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YdiF;
sprot_id sp|O05519|YDIF_BACSU;
sprot_target db:uniprot_sprot|sp|O05519|YDIF_BACSU 1 537 evalue:1.2e-99 qcov:83.90 identity:39.20;
30267 31529 CDS
ID metaerg.pl|07772
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133372.1 1 420 evalue:8.7e-222 qcov:100.00 identity:88.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF17116;
pfam_desc Domain of unknown function (DUF5103);
pfam_id DUF5103;
pfam_target db:Pfam-A.hmm|PF17116.5 evalue:1.7e-87 score:292.6 best_domain_score:292.6 name:DUF5103;
sp YES;
30267 30320 signal_peptide
ID metaerg.pl|07773
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
32443 31565 CDS
ID metaerg.pl|07774
allec_ids 3.1.-.-;
allgo_ids GO:0016788;
casgene_acc cd09652_cas6_CAS-I:CAS-III; cd09759_cas6_CAS-I-A; COG1583_cas6_CAS-I:CAS-III:CAS-IV; pfam01881_cas6_CAS-I:CAS-III;
casgene_name cas6; cas6; cas6; cas6;
casgene_target db:casgenes.hmm|cd09652_cas6_CAS-I:CAS-III evalue:4.1e-18 score:65.7 best_domain_score:65.3 name:cas6; db:casgenes.hmm|cd09759_cas6_CAS-I-A evalue:2.4e-15 score:56.4 best_domain_score:55.1 name:cas6; db:casgenes.hmm|COG1583_cas6_CAS-I:CAS-III:CAS-IV evalue:2.4e-26 score:92.3 best_domain_score:91.9 name:cas6; db:casgenes.hmm|pfam01881_cas6_CAS-I:CAS-III evalue:3.7e-32 score:111.0 best_domain_score:110.5 name:cas6;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133228.1 1 292 evalue:3.5e-161 qcov:100.00 identity:96.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01881;
pfam_desc CRISPR associated protein Cas6;
pfam_id Cas_Cas6;
pfam_target db:Pfam-A.hmm|PF01881.16 evalue:6.8e-23 score:81.1 best_domain_score:80.6 name:Cas_Cas6;
tigrfam_acc TIGR01877;
tigrfam_desc CRISPR-associated endoribonuclease Cas6;
tigrfam_name cas_cas6;
tigrfam_target db:TIGRFAMs.hmm|TIGR01877 evalue:2.3e-19 score:69.8 best_domain_score:69.2 name:TIGR01877;
33642 32545 CDS
ID metaerg.pl|07775
allgo_ids GO:0005525; GO:0005737; GO:0005524; GO:0016887; GO:0046872; GO:0043023; GO:0043022;
allko_ids K06942;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133227.1 1 365 evalue:1.3e-189 qcov:100.00 identity:92.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF02421; PF01926; PF06071;
pfam_desc Ferrous iron transport protein B; 50S ribosome-binding GTPase; Protein of unknown function (DUF933);
pfam_id FeoB_N; MMR_HSR1; YchF-GTPase_C;
pfam_target db:Pfam-A.hmm|PF02421.18 evalue:7.1e-10 score:37.9 best_domain_score:36.0 name:FeoB_N; db:Pfam-A.hmm|PF01926.23 evalue:5.7e-25 score:86.9 best_domain_score:85.3 name:MMR_HSR1; db:Pfam-A.hmm|PF06071.13 evalue:3.7e-40 score:135.2 best_domain_score:133.9 name:YchF-GTPase_C;
sprot_desc Ribosome-binding ATPase YchF;
sprot_id sp|P37518|YCHF_BACSU;
sprot_target db:uniprot_sprot|sp|P37518|YCHF_BACSU 1 365 evalue:5.3e-121 qcov:100.00 identity:59.40;
tigrfam_acc TIGR00092;
tigrfam_desc GTP-binding protein YchF;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00092;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00092 evalue:1.2e-150 score:500.9 best_domain_score:500.7 name:TIGR00092;
34866 33658 CDS
ID metaerg.pl|07776
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133226.1 43 402 evalue:8.2e-169 qcov:89.60 identity:89.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:6.5e-43 score:146.3 best_domain_score:146.0 name:AI-2E_transport;
tm_num 9;
34866 33658 transmembrane_helix
ID metaerg.pl|07777
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology o33700-33759i33796-33900o33958-34026i34186-34239o34252-34320i34411-34479o34507-34575i34612-34680o34738-34806i;
35284 34955 CDS
ID metaerg.pl|07778
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133225.1 1 109 evalue:3.9e-49 qcov:100.00 identity:90.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF11680;
pfam_desc Protein of unknown function (DUF3276);
pfam_id DUF3276;
pfam_target db:Pfam-A.hmm|PF11680.8 evalue:1.8e-37 score:127.7 best_domain_score:127.5 name:DUF3276;
35815 35468 CDS
ID metaerg.pl|07779
allgo_ids GO:0051539; GO:0046872; GO:0055114;
allko_ids K11260; K00204; K00532; K03388; K00176; K00390; K00338; K00533; K00124; K05580; K00205;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133224.1 1 115 evalue:5.1e-63 qcov:100.00 identity:95.70;
kegg_pathway_id 00680; 00790; 00190; 00130; 00630; 00020; 00920; 00720;
kegg_pathway_name Methane metabolism; Folate biosynthesis; Oxidative phosphorylation; Ubiquinone biosynthesis; Glyoxylate and dicarboxylate metabolism; Citrate cycle (TCA cycle); Sulfur metabolism; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF00037; PF12797; PF12838;
pfam_desc 4Fe-4S binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain;
pfam_id Fer4; Fer4_2; Fer4_7;
pfam_target db:Pfam-A.hmm|PF00037.27 evalue:4.3e-06 score:25.6 best_domain_score:25.6 name:Fer4; db:Pfam-A.hmm|PF12797.7 evalue:5.8e-06 score:25.4 best_domain_score:15.3 name:Fer4_2; db:Pfam-A.hmm|PF12838.7 evalue:1.7e-07 score:30.9 best_domain_score:29.4 name:Fer4_7;
sprot_desc Ferredoxin;
sprot_id sp|P00208|FER_ALLVD;
sprot_target db:uniprot_sprot|sp|P00208|FER_ALLVD 1 115 evalue:1.6e-18 qcov:100.00 identity:42.60;
35966 36979 CDS
ID metaerg.pl|07780
allgo_ids GO:0003995; GO:0008218; GO:0055114;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133371.1 1 337 evalue:2.6e-152 qcov:100.00 identity:77.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF05893;
pfam_desc Acyl-CoA reductase (LuxC);
pfam_id LuxC;
pfam_target db:Pfam-A.hmm|PF05893.14 evalue:1.8e-05 score:23.2 best_domain_score:20.6 name:LuxC;
37010 38320 CDS
ID metaerg.pl|07781
allgo_ids GO:0016021; GO:0005886;
allko_ids K02106;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133222.1 1 436 evalue:6.6e-188 qcov:100.00 identity:79.90;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF03606; PF02667;
pfam_desc C4-dicarboxylate anaerobic carrier; Short chain fatty acid transporter;
pfam_id DcuC; SCFA_trans;
pfam_target db:Pfam-A.hmm|PF03606.15 evalue:7.7e-08 score:30.4 best_domain_score:30.4 name:DcuC; db:Pfam-A.hmm|PF02667.14 evalue:2.5e-98 score:329.2 best_domain_score:328.6 name:SCFA_trans;
sprot_desc Putative short-chain fatty acid transporter;
sprot_id sp|P76460|ATOE_ECOLI;
sprot_target db:uniprot_sprot|sp|P76460|ATOE_ECOLI 8 429 evalue:2.1e-60 qcov:96.80 identity:35.50;
tm_num 11;
37010 38320 transmembrane_helix
ID metaerg.pl|07782
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology o37052-37120i37157-37225o37301-37369i37406-37474o37574-37630i37691-37759o37802-37870i37907-37975o38018-38086i38147-38215o38243-38311i;
38444 40702 CDS
ID metaerg.pl|07783
allec_ids 4.2.1.3;
allgo_ids GO:0005829; GO:0031012; GO:0005739; GO:0051539; GO:0003994; GO:0046872; GO:0006099;
allko_ids K01702; K01681; K01703; K01682; K01704; K01705;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133221.1 1 751 evalue:0.0e+00 qcov:99.90 identity:96.50;
kegg_pathway_id 00290; 00720; 00630; 00300; 00020;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Reductive carboxylate cycle (CO2 fixation); Glyoxylate and dicarboxylate metabolism; Lysine biosynthesis; Citrate cycle (TCA cycle);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id P105-PWY; PWY-5690; PWY-6549; TCA-GLYOX-BYPASS; ANARESP1-PWY; PWY-5750; TCA; PWY-5913; GLYOXYLATE-BYPASS; FERMENTATION-PWY; REDCITCYC; PWY-5392; PWY-561; PWY-5464; P23-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS;
metacyc_pathway_name TCA cycle IV (2-oxoglutarate decarboxylase);; TCA cycle II (plants and fungi);; L-glutamine biosynthesis III;; superpathway of glyoxylate bypass and TCA;; ; itaconate biosynthesis I;; TCA cycle I (prokaryotic);; partial TCA cycle (obligate autotrophs);; glyoxylate cycle;; mixed acid fermentation;; TCA cycle VIII (Helicobacter);; reductive TCA cycle II;; superpathway of glyoxylate cycle and fatty acid degradation;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; reductive TCA cycle I;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;;
metacyc_pathway_type TCA-VARIANTS;; TCA-VARIANTS;; GLUTAMINE-SYN;; Super-Pathways; TCA-VARIANTS;; ; Itaconate-Biosynthesis;; TCA-VARIANTS;; TCA-VARIANTS;; Energy-Metabolism;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; TCA-VARIANTS;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00330; PF00694;
pfam_desc Aconitase family (aconitate hydratase); Aconitase C-terminal domain;
pfam_id Aconitase; Aconitase_C;
pfam_target db:Pfam-A.hmm|PF00330.20 evalue:5.2e-149 score:496.4 best_domain_score:496.0 name:Aconitase; db:Pfam-A.hmm|PF00694.19 evalue:2.4e-41 score:140.3 best_domain_score:139.4 name:Aconitase_C;
sprot_desc Probable aconitate hydratase, mitochondrial;
sprot_id sp|Q54XS2|ACON_DICDI;
sprot_target db:uniprot_sprot|sp|Q54XS2|ACON_DICDI 9 751 evalue:3.3e-287 qcov:98.80 identity:65.10;
tigrfam_acc TIGR01340;
tigrfam_desc aconitate hydratase, mitochondrial;
tigrfam_mainrole Energy metabolism;
tigrfam_name aconitase_mito;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01340 evalue:0 score:1152.0 best_domain_score:1151.8 name:TIGR01340;
40802 42046 CDS
ID metaerg.pl|07784
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133220.1 8 414 evalue:3.6e-212 qcov:98.30 identity:89.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF07396;
pfam_desc Phosphate-selective porin O and P;
pfam_id Porin_O_P;
pfam_target db:Pfam-A.hmm|PF07396.11 evalue:8.9e-11 score:40.8 best_domain_score:35.3 name:Porin_O_P;
tm_num 1;
40802 42046 transmembrane_helix
ID metaerg.pl|07785
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology i40835-40903o;
42184 45231 CDS
ID metaerg.pl|07786
allgo_ids GO:0000155; GO:0007165;
allko_ids K02489; K07697; K07716; K07640; K07710; K01768; K07656; K02668; K03388; K08479; K07674; K10916; K13587; K11527; K02030; K07678; K10715; K14489; K02482; K08801; K02480; K07638; K07653; K07636; K13532; K07709; K07644; K01769; K07650; K07676; K10681; K06379; K07647; K07680; K10942; K13040; K07717; K07675; K02486; K13761; K11383; K12767; K11520; K07769; K14509; K04757; K11357; K02342; K10125; K11629; K07646; K07641; K13598; K07673; K01120; K08475; K07639; K07652; K07654; K07777; K07682; K00936; K07649; K03407; K07637; K02478; K07679; K07648; K07651; K07698; K07718; K11354; K07683; K07778; K02575; K11633; K07768; K08884; K00873; K07711; K11328; K13533; K02484; K11356; K11640; K04486; K11711; K07642; K07643; K11231; K02491; K01090; K07677; K07708; K07645; K10909; K07704; K08282; K01937;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133219.1 1 1015 evalue:0.0e+00 qcov:100.00 identity:86.90;
kegg_pathway_id 03090; 00620; 04011; 02020; 00340; 00790; 00710; 00010; 03030; 00240; 05111; 00230;
kegg_pathway_name Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Histidine metabolism; Folate biosynthesis; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; DNA replication; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF02518; PF00512; PF00989; PF08447; PF08448; PF13426; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.2e-24 score:86.2 best_domain_score:84.6 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:2.9e-14 score:52.1 best_domain_score:49.9 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:5.4e-10 score:38.5 best_domain_score:20.2 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:4.8e-17 score:61.3 best_domain_score:36.7 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:7.4e-07 score:28.6 best_domain_score:14.3 name:PAS_4; db:Pfam-A.hmm|PF13426.7 evalue:4.1e-13 score:48.7 best_domain_score:19.9 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:2.9e-23 score:81.4 best_domain_score:80.3 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.4e-22 score:79.3 best_domain_score:33.1 name:TIGR00229;
46109 45219 CDS
ID metaerg.pl|07787
allgo_ids GO:0005515;
allko_ids K09571; K01768; K01802; K09667; K04460; K09574; K01090; K05864; K08884;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133218.1 1 296 evalue:3.0e-136 qcov:100.00 identity:80.10;
kegg_pathway_id 04010; 01030; 05012; 04020; 00230;
kegg_pathway_name MAPK signaling pathway; Glycan structures - biosynthesis 1; Parkinson's disease; Calcium signaling pathway; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF12895; PF00515; PF13414; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF14561; PF13174; PF13181; PF13371;
pfam_desc Anaphase-promoting complex, cyclosome, subunit 3; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id ANAPC3; TPR_1; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_20; TPR_6; TPR_8; TPR_9;
pfam_target db:Pfam-A.hmm|PF12895.7 evalue:2.1e-12 score:46.3 best_domain_score:20.7 name:ANAPC3; db:Pfam-A.hmm|PF00515.28 evalue:6.6e-34 score:113.6 best_domain_score:21.8 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:6.8e-24 score:82.5 best_domain_score:31.6 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:7.6e-17 score:60.6 best_domain_score:15.9 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:4e-20 score:70.1 best_domain_score:14.9 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:1.8e-25 score:88.6 best_domain_score:30.4 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:8.2e-22 score:75.2 best_domain_score:23.4 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:2.5e-22 score:78.4 best_domain_score:34.3 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:1.7e-34 score:114.4 best_domain_score:18.0 name:TPR_2; db:Pfam-A.hmm|PF14561.6 evalue:2e-06 score:27.3 best_domain_score:11.1 name:TPR_20; db:Pfam-A.hmm|PF13174.6 evalue:1.4e-08 score:34.1 best_domain_score:12.6 name:TPR_6; db:Pfam-A.hmm|PF13181.6 evalue:2.5e-20 score:70.2 best_domain_score:16.1 name:TPR_8; db:Pfam-A.hmm|PF13371.6 evalue:4e-18 score:64.6 best_domain_score:23.5 name:TPR_9;
47230 46154 CDS
ID metaerg.pl|07788
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133217.1 1 358 evalue:5.1e-162 qcov:100.00 identity:88.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:1e-49 score:168.7 best_domain_score:168.3 name:AI-2E_transport;
tm_num 8;
47230 46154 transmembrane_helix
ID metaerg.pl|07789
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology i46172-46240o46250-46318i46352-46420o46595-46663i46769-46837o46847-46915i46949-47017o47060-47128i;
47367 48359 CDS
ID metaerg.pl|07790
allgo_ids GO:0006812; GO:0008324; GO:0016021; GO:0055085; GO:0016020; GO:0005886; GO:0015086; GO:0015093; GO:0015341; GO:0006876; GO:0006879; GO:0006882;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133216.1 1 330 evalue:2.8e-175 qcov:100.00 identity:92.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01545; PF16916;
pfam_desc Cation efflux family; Dimerisation domain of Zinc Transporter;
pfam_id Cation_efflux; ZT_dimer;
pfam_target db:Pfam-A.hmm|PF01545.21 evalue:2e-41 score:141.2 best_domain_score:140.9 name:Cation_efflux; db:Pfam-A.hmm|PF16916.5 evalue:1.6e-13 score:49.8 best_domain_score:49.0 name:ZT_dimer;
sprot_desc Uncharacterized transporter sll1263;
sprot_id sp|P74068|Y1263_SYNY3;
sprot_target db:uniprot_sprot|sp|P74068|Y1263_SYNY3 11 285 evalue:6.0e-39 qcov:83.30 identity:33.50;
tigrfam_acc TIGR01297;
tigrfam_desc cation diffusion facilitator family transporter;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name CDF;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01297 evalue:3.5e-63 score:212.7 best_domain_score:212.3 name:TIGR01297;
tm_num 6;
47367 48359 transmembrane_helix
ID metaerg.pl|07791
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology i47385-47453o47466-47534i47595-47663o47691-47759i47814-47873o47886-47954i;
48845 50293 CDS
ID metaerg.pl|07792
allec_ids 3.5.1.-;
allgo_ids GO:0016787; GO:0005737; GO:0071713; GO:0046982; GO:0046657;
allko_ids K12941;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133215.1 1 482 evalue:6.2e-256 qcov:100.00 identity:91.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id PWY-1822; PWY-0; PWY-6548; PWY-5784; PWY-5327; LYSDEGII-PWY;
metacyc_pathway_name indole-3-acetate activation I;; putrescine degradation III;; ; indole-3-acetate inactivation VIII;; superpathway of L-lysine degradation;; L-lysine degradation III;;
metacyc_pathway_type Activation;; Putrescine-Degradation;; ; Indole-3-Acetate-Inactivation;; LYSINE-DEG; Super-Pathways;; LYSINE-DEG;;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:4.8e-09 score:35.3 best_domain_score:34.2 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:1.2e-13 score:50.5 best_domain_score:50.0 name:Peptidase_M20;
sp YES;
sprot_desc p-aminobenzoyl-glutamate hydrolase subunit B;
sprot_id sp|P76052|ABGB_ECOLI;
sprot_target db:uniprot_sprot|sp|P76052|ABGB_ECOLI 27 465 evalue:1.9e-89 qcov:91.10 identity:40.40;
tigrfam_acc TIGR01891;
tigrfam_desc amidohydrolase;
tigrfam_mainrole Protein fate;
tigrfam_name amidohydrolases;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01891 evalue:6.6e-73 score:245.1 best_domain_score:244.8 name:TIGR01891;
48845 48901 signal_peptide
ID metaerg.pl|07793
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
52364 50334 CDS
ID metaerg.pl|07794
allec_ids 3.4.24.70;
allgo_ids GO:0004222; GO:0006508; GO:0046872; GO:0006518; GO:0006465;
allko_ids K01414;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133214.1 1 675 evalue:0.0e+00 qcov:99.90 identity:83.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01432;
pfam_desc Peptidase family M3;
pfam_id Peptidase_M3;
pfam_target db:Pfam-A.hmm|PF01432.20 evalue:1.1e-143 score:479.1 best_domain_score:478.7 name:Peptidase_M3;
sprot_desc Oligopeptidase A;
sprot_id sp|P44573|OPDA_HAEIN;
sprot_target db:uniprot_sprot|sp|P44573|OPDA_HAEIN 15 676 evalue:2.6e-137 qcov:97.90 identity:40.20;
53236 52586 CDS
ID metaerg.pl|07795
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133212.1 1 215 evalue:4.1e-90 qcov:99.50 identity:79.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
tm_num 5;
53236 52586 transmembrane_helix
ID metaerg.pl|07796
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology i52646-52714o52805-52873i52892-52960o53069-53137i53156-53224o;
53313 54506 CDS
ID metaerg.pl|07797
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133211.1 1 397 evalue:3.2e-205 qcov:100.00 identity:89.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF14559;
pfam_desc Tetratricopeptide repeat;
pfam_id TPR_19;
pfam_target db:Pfam-A.hmm|PF14559.6 evalue:1.2e-06 score:28.2 best_domain_score:13.6 name:TPR_19;
sp YES;
53313 53375 signal_peptide
ID metaerg.pl|07798
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
54716 55198 CDS
ID metaerg.pl|07799
allgo_ids GO:0043565; GO:0005829; GO:0003700;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133210.1 1 160 evalue:1.7e-80 qcov:100.00 identity:98.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01037; PF13412; PF13404;
pfam_desc Lrp/AsnC ligand binding domain; Winged helix-turn-helix DNA-binding; AsnC-type helix-turn-helix domain;
pfam_id AsnC_trans_reg; HTH_24; HTH_AsnC-type;
pfam_target db:Pfam-A.hmm|PF01037.21 evalue:2.5e-20 score:71.5 best_domain_score:70.7 name:AsnC_trans_reg; db:Pfam-A.hmm|PF13412.6 evalue:1.3e-18 score:65.5 best_domain_score:65.5 name:HTH_24; db:Pfam-A.hmm|PF13404.6 evalue:1.2e-15 score:56.2 best_domain_score:55.5 name:HTH_AsnC-type;
sprot_desc Transcriptional regulator AzlB;
sprot_id sp|O07920|AZLB_BACSU;
sprot_target db:uniprot_sprot|sp|O07920|AZLB_BACSU 7 158 evalue:6.9e-25 qcov:95.00 identity:35.50;
55246 55797 CDS
ID metaerg.pl|07800
allgo_ids GO:0016787;
allko_ids K01515;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133209.1 5 183 evalue:3.7e-76 qcov:97.80 identity:78.80;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:4.8e-11 score:42.0 best_domain_score:41.5 name:NUDIX;
55829 57196 CDS
ID metaerg.pl|07801
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0042910; GO:0006811;
allko_ids K03327;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133208.1 1 455 evalue:1.3e-226 qcov:100.00 identity:90.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01554; PF14667;
pfam_desc MatE; Polysaccharide biosynthesis C-terminal domain;
pfam_id MatE; Polysacc_synt_C;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:4.9e-62 score:207.6 best_domain_score:118.8 name:MatE; db:Pfam-A.hmm|PF14667.6 evalue:1.9e-12 score:46.7 best_domain_score:46.7 name:Polysacc_synt_C;
sprot_desc Probable multidrug resistance protein NorM;
sprot_id sp|Q98D15|NORM_RHILO;
sprot_target db:uniprot_sprot|sp|Q98D15|NORM_RHILO 5 436 evalue:3.9e-65 qcov:94.90 identity:34.60;
tigrfam_acc TIGR00797;
tigrfam_desc MATE efflux family protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name matE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00797 evalue:4.6e-96 score:321.3 best_domain_score:321.0 name:TIGR00797;
tm_num 12;
55829 57196 transmembrane_helix
ID metaerg.pl|07802
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology i55865-55924o55988-56056i56090-56158o56201-56269i56306-56365o56408-56467i56564-56632o56642-56710i56768-56836o56894-56962i56996-57064o57077-57145i;
57238 57789 CDS
ID metaerg.pl|07803
allec_ids 3.1.2.-;
allgo_ids GO:0005829; GO:0047617; GO:0000062; GO:0036042; GO:0006637;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133207.1 1 183 evalue:2.5e-88 qcov:100.00 identity:92.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id ALL-CHORISMATE-PWY; PWY-5897; PWY-5996; PWY0-1337; PWY-5861; PWY-5838; PWY-5850; PWY-5899; PWY-6453; PWY-981; PWY-5791; PWY-6320; PWY-5837; PWY-5840; PWY-5898; PWY-5863; PWY-5896; PWY-5862; PWY-5845; PWY-5860;
metacyc_pathway_name superpathway of chorismate metabolism;; superpathway of menaquinol-11 biosynthesis;; oleate biosynthesis II (animals and fungi);; oleate β-oxidation;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-8 biosynthesis I;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; stigma estolide biosynthesis;; salicylate biosynthesis II;; ; phaselate biosynthesis;; 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of menaquinol-7 biosynthesis;; superpathway of menaquinol-12 biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-6 biosynthesis I;;
metacyc_pathway_type Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Oleate-Biosynthesis;; Fatty-Acid-Degradation;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; Salicylate-Biosynthesis;; ; AROMATIC-COMPOUNDS-BIOSYN;; DHNA-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;;
pfam_acc PF03061; PF01575;
pfam_desc Thioesterase superfamily; MaoC like domain;
pfam_id 4HBT; MaoC_dehydratas;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:2.7e-19 score:68.5 best_domain_score:68.1 name:4HBT; db:Pfam-A.hmm|PF01575.19 evalue:6.3e-05 score:21.8 best_domain_score:20.8 name:MaoC_dehydratas;
sprot_desc Uncharacterized acyl-CoA thioester hydrolase CT_535;
sprot_id sp|O84540|Y535_CHLTR;
sprot_target db:uniprot_sprot|sp|O84540|Y535_CHLTR 2 152 evalue:8.5e-19 qcov:82.50 identity:35.70;
tigrfam_acc TIGR00369;
tigrfam_desc uncharacterized domain 1;
tigrfam_name unchar_dom_1;
tigrfam_target db:TIGRFAMs.hmm|TIGR00369 evalue:3.2e-10 score:39.3 best_domain_score:38.8 name:TIGR00369;
57805 59157 CDS
ID metaerg.pl|07804
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133206.1 1 450 evalue:1.6e-245 qcov:100.00 identity:90.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF00557;
pfam_desc Metallopeptidase family M24;
pfam_id Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF00557.24 evalue:5.7e-12 score:45.0 best_domain_score:44.3 name:Peptidase_M24;
sp YES;
57805 57864 signal_peptide
ID metaerg.pl|07805
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
59888 59160 CDS
ID metaerg.pl|07806
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133205.1 1 241 evalue:7.3e-88 qcov:99.60 identity:73.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF07947;
pfam_desc YhhN family;
pfam_id YhhN;
pfam_target db:Pfam-A.hmm|PF07947.14 evalue:5.8e-19 score:67.6 best_domain_score:67.1 name:YhhN;
tm_num 8;
59888 59160 transmembrane_helix
ID metaerg.pl|07807
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology i59178-59231o59241-59309i59328-59387o59415-59483i59520-59576o59589-59648i59682-59750o59760-59828i;
60362 60075 CDS
ID metaerg.pl|07808
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133204.1 1 93 evalue:6.5e-24 qcov:97.90 identity:62.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
61637 60402 CDS
ID metaerg.pl|07809
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133204.1 1 410 evalue:2.5e-152 qcov:99.80 identity:62.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
sp YES;
60402 60455 lipoprotein_signal_peptide
ID metaerg.pl|07810
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
62982 61876 CDS
ID metaerg.pl|07811
allgo_ids GO:0016021; GO:0055085;
allko_ids K08222; K08224; K08219; K08217; K12307; K08221; K08161; K08169; K05820; K02575; K08152; K08177; K08153; K03762;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133203.1 1 368 evalue:1.6e-190 qcov:100.00 identity:96.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF07690; PF12832; PF05977; PF00083;
pfam_desc Major Facilitator Superfamily; MFS_1 like family; Transmembrane secretion effector; Sugar (and other) transporter;
pfam_id MFS_1; MFS_1_like; MFS_3; Sugar_tr;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:2.2e-50 score:170.8 best_domain_score:113.0 name:MFS_1; db:Pfam-A.hmm|PF12832.7 evalue:1.1e-10 score:40.2 best_domain_score:37.7 name:MFS_1_like; db:Pfam-A.hmm|PF05977.13 evalue:7.6e-12 score:43.6 best_domain_score:42.6 name:MFS_3; db:Pfam-A.hmm|PF00083.24 evalue:9.6e-23 score:80.0 best_domain_score:53.0 name:Sugar_tr;
tm_num 10;
62982 61876 transmembrane_helix
ID metaerg.pl|07812
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology o61933-61989i62026-62094o62107-62175i62212-62280o62290-62343i62422-62490o62527-62580i62638-62706o62788-62856i62875-62943o;
64105 63158 CDS
ID metaerg.pl|07813
allgo_ids GO:0006415; GO:0005737; GO:0016149;
allko_ids K02836;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133202.1 1 315 evalue:3.3e-165 qcov:100.00 identity:94.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF03462; PF00472;
pfam_desc PCRF domain; RF-1 domain;
pfam_id PCRF; RF-1;
pfam_target db:Pfam-A.hmm|PF03462.18 evalue:6.8e-51 score:172.1 best_domain_score:172.1 name:PCRF; db:Pfam-A.hmm|PF00472.20 evalue:1.5e-38 score:130.5 best_domain_score:130.5 name:RF-1;
sprot_desc Peptide chain release factor 2;
sprot_id sp|A2RLF5|RF2_LACLM;
sprot_target db:uniprot_sprot|sp|A2RLF5|RF2_LACLM 14 304 evalue:4.9e-83 qcov:92.40 identity:53.20;
tigrfam_acc TIGR00020;
tigrfam_desc peptide chain release factor 2;
tigrfam_mainrole Protein synthesis;
tigrfam_name prfB;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00020 evalue:3.5e-120 score:400.4 best_domain_score:400.3 name:TIGR00020;
64858 64322 CDS
ID metaerg.pl|07814
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133201.1 1 178 evalue:4.4e-74 qcov:100.00 identity:84.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
sp YES;
tm_num 2;
64322 64402 signal_peptide
ID metaerg.pl|07815
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
64858 64322 transmembrane_helix
ID metaerg.pl|07816
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology i64643-64711o64739-64798i;
66091 65024 CDS
ID metaerg.pl|07817
allec_ids 2.6.1.42;
allgo_ids GO:0003824; GO:0052656; GO:0052654; GO:0052655; GO:0009097; GO:0009098; GO:0009099;
allko_ids K00826;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133200.1 1 355 evalue:2.6e-190 qcov:100.00 identity:93.00;
kegg_pathway_id 00290; 00280; 00770;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Pantothenate and CoA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id PWY-5103; PWY-5104; ILEUDEG-PWY; ILEUSYN-PWY; VALDEG-PWY; PWY-5101; PWY-5108; PWY-3001; ALANINE-VALINESYN-PWY; THREOCAT-PWY; BRANCHED-CHAIN-AA-SYN-PWY; LEU-DEG2-PWY; PWY-5078; VALSYN-PWY; PWY-5076; PWY0-1061; LEUSYN-PWY; PWY-5057;
metacyc_pathway_name L-isoleucine biosynthesis III;; L-isoleucine biosynthesis IV;; L-isoleucine degradation I;; L-isoleucine biosynthesis I (from threonine);; L-valine degradation I;; L-isoleucine biosynthesis II;; L-isoleucine biosynthesis V;; superpathway of L-isoleucine biosynthesis I;; L-alanine biosynthesis I;; superpathway of L-threonine metabolism;; superpathway of branched chain amino acid biosynthesis;; L-leucine degradation I;; L-isoleucine degradation II;; L-valine biosynthesis;; L-leucine degradation III;; superpathway of L-alanine biosynthesis;; L-leucine biosynthesis;; L-valine degradation II;;
metacyc_pathway_type ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-DEG;; ISOLEUCINE-SYN;; VALINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; ALANINE-SYN;; Super-Pathways; THREONINE-DEG;; Amino-Acid-Biosynthesis; Super-Pathways;; LEUCINE-DEG;; ISOLEUCINE-DEG;; VALINE-BIOSYNTHESIS;; LEUCINE-DEG;; ALANINE-SYN; Super-Pathways;; LEUCINE-SYN;; VALINE-DEG;;
pfam_acc PF01063;
pfam_desc Amino-transferase class IV;
pfam_id Aminotran_4;
pfam_target db:Pfam-A.hmm|PF01063.19 evalue:4.6e-34 score:117.5 best_domain_score:117.2 name:Aminotran_4;
sprot_desc Branched-chain-amino-acid aminotransferase 2;
sprot_id sp|P39576|ILVE2_BACSU;
sprot_target db:uniprot_sprot|sp|P39576|ILVE2_BACSU 2 355 evalue:5.9e-85 qcov:99.70 identity:43.60;
tigrfam_acc TIGR01123;
tigrfam_desc branched-chain amino acid aminotransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ilvE_II;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01123 evalue:3e-104 score:347.5 best_domain_score:347.3 name:TIGR01123;
66645 66097 CDS
ID metaerg.pl|07818
allec_ids 2.5.1.-; 2.5.1.17;
allgo_ids GO:0005524; GO:0019003; GO:0005525; GO:0016765; GO:0009236; GO:0070207; GO:0030091;
allko_ids K00798;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133199.1 1 182 evalue:1.8e-91 qcov:100.00 identity:92.90;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id PWY-5783; PWY-5805; POLYISOPRENSYN-PWY; PWY-6262; PWY-5861; PWY-724; PWY-6263; PWY-5808; PWY-5897; PWY-5132; PWY-5845; PWY-5862; PWY-5896; PWY-2681; PWY-5068; PWY-5898; PWY-5863; PWY-5816; PWY-5135; PWY-6268; PWY-5806; PWY-6404; PWY-5701; PWY-5140; PWY-6520; PWY-5134; PWY-4502; PWY-5064; PWY-5838; PWY-5899; P381-PWY; PWY-6403; PWY-5817; PWY-6129; PWY-5864; PWY-5133; PWY-5027; PWY-5893; PWY-6383;
metacyc_pathway_name octaprenyl diphosphate biosynthesis;; nonaprenyl diphosphate biosynthesis I;; polyisoprenoid biosynthesis (E. coli);; demethylmenaquinol-8 biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of menaquinol-8 biosynthesis II;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; lupulone and humulone biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; trans-zeatin biosynthesis;; chlorophyll cycle;; superpathway of menaquinol-12 biosynthesis;; superpathway of phylloquinol biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; xanthohumol biosynthesis;; adenosylcobalamin salvage from cobalamin;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; shikonin biosynthesis;; cannabinoid biosynthesis;; nonaprenyl diphosphate biosynthesis II;; superpathway of bitter acids biosynthesis;; wighteone and luteone biosynthesis;; chlorophyll a biosynthesis II;; superpathway of menaquinol-8 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; adenosylcobalamin biosynthesis II (aerobic);; carrageenan biosynthesis;; dodecaprenyl diphosphate biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; superpathway of plastoquinol biosynthesis;; colupulone and cohumulone biosynthesis;; phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;;
metacyc_pathway_type Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; CYTOKININ-BIOSYNTHESIS;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; PRENYLFLAVONOID-SYN;; Cobamide-Salvage;; Polyprenyl-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; QUINONE-SYN;; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;; Polysaccharides-Biosynthesis;; Polyprenyl-Biosynthesis;; Lipid-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;;
pfam_acc PF01923;
pfam_desc Cobalamin adenosyltransferase;
pfam_id Cob_adeno_trans;
pfam_target db:Pfam-A.hmm|PF01923.18 evalue:1.7e-59 score:199.9 best_domain_score:199.7 name:Cob_adeno_trans;
sprot_desc Cobalamin adenosyltransferase;
sprot_id sp|Q1LJ80|ATR_CUPMC;
sprot_target db:uniprot_sprot|sp|Q1LJ80|ATR_CUPMC 2 179 evalue:1.5e-28 qcov:97.80 identity:42.50;
tigrfam_acc TIGR00636;
tigrfam_desc ATP:cob(I)alamin adenosyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name PduO_Nterm;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00636 evalue:4.6e-57 score:191.6 best_domain_score:191.4 name:TIGR00636;
67450 66728 CDS
ID metaerg.pl|07819
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0022857; GO:0055085;
allko_ids K11962; K02000; K10243; K09812; K02023; K02018; K10000; K10235; K05816; K11076; K02065; K01995; K02049; K02031; K10111; K01998; K10112; K09810; K02068; K11072; K02045; K02028; K02071; K06861; K01996; K11084; K02032; K02017; K01997; K02003; K02010; K05847; K02006; K02052; K02004;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133198.1 1 240 evalue:3.6e-127 qcov:100.00 identity:95.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.3e-08 score:33.4 best_domain_score:19.1 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.9e-35 score:121.0 best_domain_score:120.5 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein TM_0352;
sprot_id sp|Q9WYI7|Y352_THEMA;
sprot_target db:uniprot_sprot|sp|Q9WYI7|Y352_THEMA 1 222 evalue:1.6e-70 qcov:92.50 identity:56.80;
70307 67527 CDS
ID metaerg.pl|07820
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133197.1 1 926 evalue:0.0e+00 qcov:100.00 identity:80.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF14559;
pfam_desc Tetratricopeptide repeat;
pfam_id TPR_19;
pfam_target db:Pfam-A.hmm|PF14559.6 evalue:1.9e-08 score:33.9 best_domain_score:27.8 name:TPR_19;
tm_num 11;
70307 67527 transmembrane_helix
ID metaerg.pl|07821
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology i67539-67607o67761-67829i67848-67907o67935-68003i68022-68090o68133-68201i68235-68303o68313-68381i68406-68474o68517-68585i68646-68714o;
70620 70333 CDS
ID metaerg.pl|07822
allec_ids 6.3.5.-;
allgo_ids GO:0006450; GO:0005524; GO:0050567; GO:0006412;
allko_ids K02435;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133196.1 1 95 evalue:7.2e-39 qcov:100.00 identity:88.40;
kegg_pathway_id 00252; 00251;
kegg_pathway_name Alanine and aspartate metabolism; Glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id PWY490-4;
metacyc_pathway_name L-asparagine biosynthesis III (tRNA-dependent);;
metacyc_pathway_type ASPARAGINE-SYN; Aminoacyl-tRNAs-Charging;;
pfam_acc PF02686;
pfam_desc Glu-tRNAGln amidotransferase C subunit;
pfam_id Glu-tRNAGln;
pfam_target db:Pfam-A.hmm|PF02686.15 evalue:1.6e-22 score:78.7 best_domain_score:77.6 name:Glu-tRNAGln;
sprot_desc Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C;
sprot_id sp|Q11R87|GATC_CYTH3;
sprot_target db:uniprot_sprot|sp|Q11R87|GATC_CYTH3 1 94 evalue:1.2e-21 qcov:98.90 identity:53.20;
tigrfam_acc TIGR00135;
tigrfam_desc aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name gatC;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00135 evalue:7.6e-31 score:105.5 best_domain_score:105.3 name:TIGR00135;
71474 70737 CDS
ID metaerg.pl|07823
allec_ids 2.3.1.51;
allgo_ids GO:0016746; GO:0005783; GO:0016021; GO:0005811; GO:0003841; GO:0016024; GO:0046474; GO:0006654;
allko_ids K13512; K13510; K13509;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133195.1 1 242 evalue:4.2e-115 qcov:98.80 identity:84.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id PWY4FS-7; PWY-5981; PHOSLIPSYN-PWY; PWY4FS-8; PWY0-1319; PHOSLIPSYN2-PWY; PWY-5667;
metacyc_pathway_name phosphatidylglycerol biosynthesis I (plastidic);; CDP-diacylglycerol biosynthesis III;; superpathway of phospholipid biosynthesis I (bacteria);; phosphatidylglycerol biosynthesis II (non-plastidic);; CDP-diacylglycerol biosynthesis II;; superpathway of phospholipid biosynthesis II (plants);; CDP-diacylglycerol biosynthesis I;;
metacyc_pathway_type PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;;
pfam_acc PF01553;
pfam_desc Acyltransferase;
pfam_id Acyltransferase;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:1.8e-20 score:72.2 best_domain_score:71.5 name:Acyltransferase;
sprot_desc Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase;
sprot_id sp|P33333|PLSC_YEAST;
sprot_target db:uniprot_sprot|sp|P33333|PLSC_YEAST 54 237 evalue:4.5e-15 qcov:75.10 identity:30.40;
tm_num 1;
71474 70737 transmembrane_helix
ID metaerg.pl|07824
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology i70755-70823o;
71848 71471 CDS
ID metaerg.pl|07825
allgo_ids GO:0019825; GO:0020037; GO:0046872; GO:0005344;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009033481.1 1 125 evalue:3.7e-59 qcov:100.00 identity:85.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01152;
pfam_desc Bacterial-like globin;
pfam_id Bac_globin;
pfam_target db:Pfam-A.hmm|PF01152.21 evalue:6.1e-31 score:106.3 best_domain_score:106.2 name:Bac_globin;
sprot_desc Group 2 truncated hemoglobin GlbO;
sprot_id sp|P0A596|TRHBO_MYCBO;
sprot_target db:uniprot_sprot|sp|P0A596|TRHBO_MYCBO 5 123 evalue:2.8e-21 qcov:95.20 identity:43.90;
72055 73731 CDS
ID metaerg.pl|07826
allgo_ids GO:0006508; GO:0016805;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133193.1 1 558 evalue:2.7e-287 qcov:100.00 identity:84.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01244;
pfam_desc Membrane dipeptidase (Peptidase family M19);
pfam_id Peptidase_M19;
pfam_target db:Pfam-A.hmm|PF01244.21 evalue:1e-08 score:33.9 best_domain_score:25.6 name:Peptidase_M19;
75252 73894 CDS
ID metaerg.pl|07827
allgo_ids GO:0006508; GO:0008233;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133192.1 1 452 evalue:5.0e-231 qcov:100.00 identity:94.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01957; PF01343; PF01972;
pfam_desc NfeD-like C-terminal, partner-binding; Peptidase family S49; Serine dehydrogenase proteinase;
pfam_id NfeD; Peptidase_S49; SDH_sah;
pfam_target db:Pfam-A.hmm|PF01957.18 evalue:6.3e-15 score:54.5 best_domain_score:52.2 name:NfeD; db:Pfam-A.hmm|PF01343.18 evalue:5.5e-06 score:25.6 best_domain_score:24.6 name:Peptidase_S49; db:Pfam-A.hmm|PF01972.16 evalue:1.9e-06 score:26.3 best_domain_score:25.5 name:SDH_sah;
sp YES;
tm_num 5;
73894 73956 signal_peptide
ID metaerg.pl|07828
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
75252 73894 transmembrane_helix
ID metaerg.pl|07829
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology o73903-73956i74578-74646o74674-74742i74761-74862o74920-74988i;
75422 76618 CDS
ID metaerg.pl|07830
allko_ids K01448; K08307; K02020; K01185; K01537; K01446; K09693; K01081; K04565; K01183; K01449; K01119; K01447;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133191.1 1 398 evalue:7.6e-175 qcov:100.00 identity:82.00;
kegg_pathway_id 05014; 02010; 00550; 00760; 00530; 00240; 00230;
kegg_pathway_name Amyotrophic lateral sclerosis (ALS); ABC transporters - General; Peptidoglycan biosynthesis; Nicotinate and nicotinamide metabolism; Aminosugars metabolism; Pyrimidine metabolism; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01476;
pfam_desc LysM domain;
pfam_id LysM;
pfam_target db:Pfam-A.hmm|PF01476.20 evalue:8.5e-34 score:114.6 best_domain_score:42.4 name:LysM;
sp YES;
75422 75478 signal_peptide
ID metaerg.pl|07831
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
76748 77305 CDS
ID metaerg.pl|07832
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133190.1 1 185 evalue:1.5e-93 qcov:100.00 identity:87.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
tm_num 1;
76748 77305 transmembrane_helix
ID metaerg.pl|07833
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology i76805-76873o;
77305 78069 CDS
ID metaerg.pl|07834
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133189.1 1 254 evalue:3.1e-129 qcov:100.00 identity:84.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF09674;
pfam_desc Protein of unknown function (DUF2400);
pfam_id DUF2400;
pfam_target db:Pfam-A.hmm|PF09674.10 evalue:6.9e-91 score:303.5 best_domain_score:303.3 name:DUF2400;
tigrfam_acc TIGR02757;
tigrfam_desc TIGR02757 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR02757;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR02757 evalue:3.8e-64 score:215.8 best_domain_score:215.6 name:TIGR02757;
81413 78225 CDS
ID metaerg.pl|07835
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009033474.1 1 1061 evalue:0.0e+00 qcov:99.90 identity:90.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF02012; PF15902;
pfam_desc BNR/Asp-box repeat; Sortilin, neurotensin receptor 3,;
pfam_id BNR; Sortilin-Vps10;
pfam_target db:Pfam-A.hmm|PF02012.20 evalue:2.4e-12 score:44.1 best_domain_score:11.4 name:BNR; db:Pfam-A.hmm|PF15902.5 evalue:8.3e-31 score:106.5 best_domain_score:49.6 name:Sortilin-Vps10;
sp YES;
tm_num 1;
78225 78317 signal_peptide
ID metaerg.pl|07836
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
81413 78225 transmembrane_helix
ID metaerg.pl|07837
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
topology i78237-78305o;
81630 83495 CDS
ID metaerg.pl|07838
allgo_ids GO:0008237; GO:0008270;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133187.1 1 621 evalue:0.0e+00 qcov:100.00 identity:92.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF01433;
pfam_desc Peptidase family M1 domain;
pfam_id Peptidase_M1;
pfam_target db:Pfam-A.hmm|PF01433.20 evalue:2.1e-18 score:65.9 best_domain_score:64.8 name:Peptidase_M1;
sp YES;
81630 81698 signal_peptide
ID metaerg.pl|07839
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
83631 84824 CDS
ID metaerg.pl|07840
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Belliella;s__Belliella buryatensis;
genomedb_acc GCF_900188245.1;
genomedb_target db:genomedb|GCF_900188245.1|WP_089241101.1 11 394 evalue:1.2e-68 qcov:96.70 identity:41.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
sp YES;
83631 83687 lipoprotein_signal_peptide
ID metaerg.pl|07841
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
86415 85165 CDS
ID metaerg.pl|07842
allec_ids 2.3.1.47;
allgo_ids GO:0009058; GO:0030170; GO:0008710; GO:0008890; GO:0009102;
allko_ids K00639;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133185.1 1 416 evalue:5.4e-232 qcov:100.00 identity:96.40;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id PWY-5005; BIOTIN-BIOSYNTHESIS-PWY; PWY-6519; PWY-6578;
metacyc_pathway_name biotin biosynthesis II;; biotin biosynthesis I;; 8-amino-7-oxononanoate biosynthesis I;; 8-amino-7-oxononanoate biosynthesis III;;
metacyc_pathway_type BIOTIN-SYN; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; 7-Keto-8-aminopelargonate-Biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:2.6e-40 score:137.9 best_domain_score:137.7 name:Aminotran_1_2;
sprot_desc 8-amino-7-oxononanoate synthase;
sprot_id sp|B7ID58|BIOF_THEAB;
sprot_target db:uniprot_sprot|sp|B7ID58|BIOF_THEAB 22 400 evalue:2.0e-60 qcov:91.10 identity:34.70;
86598 88094 CDS
ID metaerg.pl|07843
allec_ids 6.4.1.1;
allgo_ids GO:0005524; GO:0046872; GO:0004736; GO:0006094;
allko_ids K01589; K01966; K11541; K01965; K01571; K01945; K01955; K01457; K01941; K01959; K14541; K03416; K01964; K01956; K01954; K01921; K11540; K01958; K00609; K01960; K01968; K08289;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133184.1 1 498 evalue:3.9e-261 qcov:100.00 identity:91.40;
kegg_pathway_id 00252; 00251; 00220; 00620; 00330; 00791; 00473; 00640; 00550; 00280; 00020; 00240; 00670; 00230;
kegg_pathway_name Alanine and aspartate metabolism; Glutamate metabolism; Urea cycle and metabolism of amino groups; Pyruvate metabolism; Arginine and proline metabolism; Atrazine degradation; D-Alanine metabolism; Propanoate metabolism; Peptidoglycan biosynthesis; Valine, leucine and isoleucine degradation; Citrate cycle (TCA cycle); Pyrimidine metabolism; One carbon pool by folate; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
metacyc_pathway_id PWY-5750; PWY-6146; P42-PWY; PWY-6142;
metacyc_pathway_name itaconate biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; incomplete reductive TCA cycle;; gluconeogenesis II (Methanobacterium thermoautotrophicum);;
metacyc_pathway_type Itaconate-Biosynthesis;; Biosynthesis; Super-Pathways;; Reductive-TCA-Cycles;; Gluconeogenesis; Super-Pathways;;
pfam_acc PF02222; PF02655; PF02785; PF00289; PF02786; PF07478;
pfam_desc ATP-grasp domain; ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus;
pfam_id ATP-grasp; ATP-grasp_3; Biotin_carb_C; Biotin_carb_N; CPSase_L_D2; Dala_Dala_lig_C;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:1.3e-10 score:40.4 best_domain_score:38.2 name:ATP-grasp; db:Pfam-A.hmm|PF02655.14 evalue:2e-06 score:27.2 best_domain_score:26.5 name:ATP-grasp_3; db:Pfam-A.hmm|PF02785.19 evalue:6.1e-39 score:131.7 best_domain_score:130.8 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:5.9e-46 score:154.8 best_domain_score:147.0 name:Biotin_carb_N; db:Pfam-A.hmm|PF02786.17 evalue:2.6e-80 score:268.1 best_domain_score:267.5 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:1.6e-14 score:53.1 best_domain_score:52.1 name:Dala_Dala_lig_C;
sprot_desc Pyruvate carboxylase subunit A;
sprot_id sp|Q58626|PYCA_METJA;
sprot_target db:uniprot_sprot|sp|Q58626|PYCA_METJA 6 476 evalue:1.4e-135 qcov:94.60 identity:51.60;
88094 89395 CDS
ID metaerg.pl|07844
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133183.1 1 433 evalue:2.6e-221 qcov:100.00 identity:85.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF06245;
pfam_desc Protein of unknown function (DUF1015);
pfam_id DUF1015;
pfam_target db:Pfam-A.hmm|PF06245.11 evalue:6.9e-102 score:340.5 best_domain_score:340.3 name:DUF1015;
89392 89982 CDS
ID metaerg.pl|07845
allec_ids 3.6.1.9;
allgo_ids GO:0047429; GO:0005737; GO:0035529; GO:0009117;
allko_ids K06287;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133182.1 1 191 evalue:6.0e-72 qcov:97.40 identity:72.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF02545;
pfam_desc Maf-like protein;
pfam_id Maf;
pfam_target db:Pfam-A.hmm|PF02545.14 evalue:1.1e-50 score:171.0 best_domain_score:170.8 name:Maf;
sprot_desc dTTP/UTP pyrophosphatase;
sprot_id sp|A6L391|NTPPA_BACV8;
sprot_target db:uniprot_sprot|sp|A6L391|NTPPA_BACV8 3 188 evalue:9.7e-45 qcov:94.90 identity:47.60;
tigrfam_acc TIGR00172;
tigrfam_desc septum formation protein Maf;
tigrfam_mainrole Cellular processes;
tigrfam_name maf;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR00172 evalue:1.2e-43 score:148.0 best_domain_score:147.8 name:TIGR00172;
90612 90073 CDS
ID metaerg.pl|07846
allgo_ids GO:0005615; GO:0030288;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Belliella;s__Belliella buryatensis;
genomedb_acc GCF_900188245.1;
genomedb_target db:genomedb|GCF_900188245.1|WP_089241305.1 1 178 evalue:3.3e-69 qcov:99.40 identity:84.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF02469;
pfam_desc Fasciclin domain;
pfam_id Fasciclin;
pfam_target db:Pfam-A.hmm|PF02469.22 evalue:1.7e-37 score:127.8 best_domain_score:127.2 name:Fasciclin;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P74615|Y1483_SYNY3;
sprot_target db:uniprot_sprot|sp|P74615|Y1483_SYNY3 9 178 evalue:1.3e-35 qcov:95.00 identity:50.30;
90073 90135 lipoprotein_signal_peptide
ID metaerg.pl|07847
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
90741 91148 CDS
ID metaerg.pl|07848
allec_ids 2.1.1.181;
allgo_ids GO:0008168; GO:0005737; GO:0052907;
allko_ids K06970;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Belliella;s__Belliella buryatensis;
genomedb_acc GCF_900188245.1;
genomedb_target db:genomedb|GCF_900188245.1|WP_089241307.1 1 136 evalue:9.2e-56 qcov:100.00 identity:70.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.25577; 27.8654; 2.72792; 13.8822; 9.99951;
pfam_acc PF05971;
pfam_desc RNA methyltransferase;
pfam_id Methyltransf_10;
pfam_target db:Pfam-A.hmm|PF05971.12 evalue:1.3e-55 score:188.1 best_domain_score:187.9 name:Methyltransf_10;
sprot_desc Ribosomal RNA large subunit methyltransferase F;
sprot_id sp|C6D8Y7|RLMF_PECCP;
sprot_target db:uniprot_sprot|sp|C6D8Y7|RLMF_PECCP 7 135 evalue:4.6e-46 qcov:94.90 identity:61.80;
>Feature NODE_52_length_90845_cov_32.6744
3 1034 CDS
ID metaerg.pl|07849
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0009060; GO:0016021; GO:0020037; GO:0055114; GO:0005886; GO:0045277; GO:0046872; GO:0015990; GO:0006119;
allko_ids K02274;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725559.1 1 343 evalue:2.6e-192 qcov:100.00 identity:95.30;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00115;
pfam_desc Cytochrome C and Quinol oxidase polypeptide I;
pfam_id COX1;
pfam_target db:Pfam-A.hmm|PF00115.20 evalue:1.2e-105 score:353.1 best_domain_score:352.9 name:COX1;
sprot_desc Probable cytochrome c oxidase subunit 1;
sprot_id sp|O54069|COX1_RICPR;
sprot_target db:uniprot_sprot|sp|O54069|COX1_RICPR 1 329 evalue:7.7e-114 qcov:95.90 identity:60.00;
tm_num 8;
3 1034 transmembrane_helix
ID metaerg.pl|07850
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology i21-89o168-236i255-323o366-434i471-539o582-650i684-752o810-878i;
1196 1750 CDS
ID metaerg.pl|07851
allgo_ids GO:0005507; GO:0016021; GO:0005886; GO:0008535;
allko_ids K02258;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725558.1 1 184 evalue:7.8e-74 qcov:100.00 identity:72.80;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF04442;
pfam_desc Cytochrome c oxidase assembly protein CtaG/Cox11;
pfam_id CtaG_Cox11;
pfam_target db:Pfam-A.hmm|PF04442.14 evalue:6.5e-50 score:168.3 best_domain_score:168.1 name:CtaG_Cox11;
sprot_desc Cytochrome c oxidase assembly protein CtaG;
sprot_id sp|A6U6U8|COXZ_SINMW;
sprot_target db:uniprot_sprot|sp|A6U6U8|COXZ_SINMW 12 179 evalue:2.2e-30 qcov:91.30 identity:41.00;
tm_num 1;
1196 1750 transmembrane_helix
ID metaerg.pl|07852
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology o1223-1291i;
1767 2627 CDS
ID metaerg.pl|07853
allec_ids 1.9.3.1;
allgo_ids GO:0015002; GO:0016020; GO:0016021; GO:0005743; GO:0045277; GO:0004129; GO:0019646;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725557.1 1 286 evalue:4.8e-139 qcov:100.00 identity:80.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00510;
pfam_desc Cytochrome c oxidase subunit III;
pfam_id COX3;
pfam_target db:Pfam-A.hmm|PF00510.18 evalue:1.9e-59 score:200.8 best_domain_score:195.3 name:COX3;
sprot_desc Cytochrome c oxidase subunit 3;
sprot_id sp|P55777|COX3_GADMO;
sprot_target db:uniprot_sprot|sp|P55777|COX3_GADMO 6 284 evalue:3.6e-48 qcov:97.60 identity:40.70;
tm_num 7;
1767 2627 transmembrane_helix
ID metaerg.pl|07854
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology i1785-1853o1881-1949i2007-2075o2220-2288i2307-2375o2433-2501i2562-2621o;
5755 2714 CDS
ID metaerg.pl|07855
allec_ids 3.6.4.-;
allgo_ids GO:0003676; GO:0005524; GO:0004386;
allko_ids K05591; K05592; K03724;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725556.1 7 1007 evalue:0.0e+00 qcov:98.80 identity:57.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00270; PF08494; PF00271; PF04851;
pfam_desc DEAD/DEAH box helicase; DEAD/H associated; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit;
pfam_id DEAD; DEAD_assoc; Helicase_C; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:5e-24 score:84.2 best_domain_score:83.1 name:DEAD; db:Pfam-A.hmm|PF08494.11 evalue:6.4e-53 score:178.6 best_domain_score:178.0 name:DEAD_assoc; db:Pfam-A.hmm|PF00271.31 evalue:1.2e-12 score:47.4 best_domain_score:46.2 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:1.4e-05 score:24.4 best_domain_score:23.5 name:ResIII;
sprot_desc Probable ATP-dependent helicase lhr;
sprot_id sp|P30015|LHR_ECOLI;
sprot_target db:uniprot_sprot|sp|P30015|LHR_ECOLI 12 813 evalue:8.6e-129 qcov:79.20 identity:34.60;
6204 5755 CDS
ID metaerg.pl|07856
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725555.1 1 149 evalue:6.8e-44 qcov:100.00 identity:57.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
sp YES;
5755 5814 lipoprotein_signal_peptide
ID metaerg.pl|07857
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
8123 6201 CDS
ID metaerg.pl|07858
allgo_ids GO:0004357; GO:0042398;
allko_ids K01697; K00031; K02000; K11527; K05847; K00641; K00088; K00974; K00970; K02806;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725554.1 1 639 evalue:0.0e+00 qcov:99.80 identity:85.90;
kegg_pathway_id 00450; 02060; 02010; 00480; 00271; 00920; 00720; 00983; 00260; 00230; 00020;
kegg_pathway_name Selenoamino acid metabolism; Phosphotransferase system (PTS); ABC transporters - General; Glutathione metabolism; Methionine metabolism; Sulfur metabolism; Reductive carboxylate cycle (CO2 fixation); Drug metabolism - other enzymes; Glycine, serine and threonine metabolism; Purine metabolism; Citrate cycle (TCA cycle);
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00571; PF04107;
pfam_desc CBS domain; Glutamate-cysteine ligase family 2(GCS2);
pfam_id CBS; GCS2;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:2.2e-27 score:94.5 best_domain_score:56.3 name:CBS; db:Pfam-A.hmm|PF04107.13 evalue:0.00011 score:21.0 best_domain_score:14.3 name:GCS2;
8278 9966 CDS
ID metaerg.pl|07859
allec_ids 6.2.1.3;
allgo_ids GO:0003824; GO:0016020; GO:0003996; GO:0005524; GO:0102391; GO:0004467;
allko_ids K01913; K01586; K05939; K02364; K00992; K01912; K01779; K01776; K00143; K03367; K01652; K00666; K01897; K01895; K01784; K01909; K01904;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725553.1 1 562 evalue:3.0e-278 qcov:100.00 identity:83.80;
kegg_pathway_id 00620; 00903; 00960; 00300; 00640; 00650; 00720; 00520; 00632; 00940; 00251; 00252; 00473; 00071; 00360; 00052; 00660; 00471; 00061; 00290; 00010; 00310; 00564; 00281; 01053; 00770; 00930;
kegg_pathway_name Pyruvate metabolism; Limonene and pinene degradation; Alkaloid biosynthesis II; Lysine biosynthesis; Propanoate metabolism; Butanoate metabolism; Reductive carboxylate cycle (CO2 fixation); Nucleotide sugars metabolism; Benzoate degradation via CoA ligation; Phenylpropanoid biosynthesis; Glutamate metabolism; Alanine and aspartate metabolism; D-Alanine metabolism; Fatty acid metabolism; Phenylalanine metabolism; Galactose metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid biosynthesis; Valine, leucine and isoleucine biosynthesis; Glycolysis / Gluconeogenesis; Lysine degradation; Glycerophospholipid metabolism; Geraniol degradation; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Caprolactam degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-5972; PWY-5143; P221-PWY; FAO-PWY; PWY-6001; PWY-6000; PWY-5995; PWY-5136; PWY-561;
metacyc_pathway_name stearate biosynthesis I (animals and fungi);; long-chain fatty acid activation;; octane oxidation;; fatty acid β-oxidation I;; linoleate biosynthesis II (animals);; γ-linolenate biosynthesis II (animals);; linoleate biosynthesis I (plants);; fatty acid β-oxidation II (peroxisome);; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Stearate-Biosynthesis;; Activation; Lipid-Biosynthesis;; Other-Degradation;; Fatty-Acid-Degradation;; Linoleate-Biosynthesis;; Gamma-linolenate-Biosynthesis;; Linoleate-Biosynthesis;; Fatty-Acid-Degradation;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:1.3e-112 score:375.7 best_domain_score:375.2 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:4.8e-21 score:74.8 best_domain_score:74.8 name:AMP-binding_C;
sprot_desc Long-chain-fatty-acid--CoA ligase;
sprot_id sp|P69452|LCFA_ECOL6;
sprot_target db:uniprot_sprot|sp|P69452|LCFA_ECOL6 4 553 evalue:4.2e-194 qcov:97.90 identity:59.50;
11055 10021 CDS
ID metaerg.pl|07860
allec_ids 2.7.7.7;
allgo_ids GO:0006281; GO:0005737; GO:0003684; GO:0003887; GO:0000287; GO:0006261;
allko_ids K03515; K02346;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725552.1 1 339 evalue:4.3e-134 qcov:98.50 identity:73.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00817; PF11799; PF11798;
pfam_desc impB/mucB/samB family; impB/mucB/samB family C-terminal domain; IMS family HHH motif;
pfam_id IMS; IMS_C; IMS_HHH;
pfam_target db:Pfam-A.hmm|PF00817.20 evalue:7.7e-46 score:155.0 best_domain_score:153.1 name:IMS; db:Pfam-A.hmm|PF11799.8 evalue:4.7e-22 score:78.1 best_domain_score:76.8 name:IMS_C; db:Pfam-A.hmm|PF11798.8 evalue:2.4e-09 score:36.3 best_domain_score:34.9 name:IMS_HHH;
sprot_desc DNA polymerase IV;
sprot_id sp|B8FBE8|DPO4_DESAL;
sprot_target db:uniprot_sprot|sp|B8FBE8|DPO4_DESAL 1 333 evalue:8.9e-70 qcov:96.80 identity:44.90;
11186 12340 CDS
ID metaerg.pl|07861
allec_ids 2.8.1.7;
allgo_ids GO:0031071;
allko_ids K01556; K11717;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL36947.1 15 382 evalue:2.6e-103 qcov:95.80 identity:52.40;
kegg_pathway_id 00380;
kegg_pathway_name Tryptophan metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY0-1021; PWY0-1061;
metacyc_pathway_name L-alanine biosynthesis III;; superpathway of L-alanine biosynthesis;;
metacyc_pathway_type ALANINE-SYN;; ALANINE-SYN; Super-Pathways;;
pfam_acc PF00266;
pfam_desc Aminotransferase class-V;
pfam_id Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:3.4e-46 score:157.1 best_domain_score:156.8 name:Aminotran_5;
sprot_desc Probable cysteine desulfurase;
sprot_id sp|O27442|CSD_METTH;
sprot_target db:uniprot_sprot|sp|O27442|CSD_METTH 3 383 evalue:7.2e-36 qcov:99.20 identity:28.30;
12697 12359 CDS
ID metaerg.pl|07862
allgo_ids GO:0035438;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725551.1 1 112 evalue:1.2e-48 qcov:100.00 identity:87.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF07238;
pfam_desc PilZ domain;
pfam_id PilZ;
pfam_target db:Pfam-A.hmm|PF07238.14 evalue:5.6e-08 score:32.3 best_domain_score:32.1 name:PilZ;
13670 12702 CDS
ID metaerg.pl|07863
allec_ids 2.7.7.7;
allgo_ids GO:0005524; GO:0009360; GO:0008408; GO:0003677; GO:0003887; GO:0006261;
allko_ids K02340; K02343; K02341;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725550.1 1 322 evalue:1.4e-94 qcov:100.00 identity:55.70;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00004; PF13177;
pfam_desc ATPase family associated with various cellular activities (AAA); DNA polymerase III, delta subunit;
pfam_id AAA; DNA_pol3_delta2;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:4.9e-05 score:23.0 best_domain_score:21.8 name:AAA; db:Pfam-A.hmm|PF13177.6 evalue:1.5e-46 score:157.4 best_domain_score:157.1 name:DNA_pol3_delta2;
sprot_desc DNA polymerase III subunit delta';
sprot_id sp|P52024|HOLB_PSEAE;
sprot_target db:uniprot_sprot|sp|P52024|HOLB_PSEAE 2 321 evalue:3.5e-44 qcov:99.40 identity:35.70;
tigrfam_acc TIGR00678;
tigrfam_desc DNA polymerase III, delta' subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name holB;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00678 evalue:1.6e-58 score:196.6 best_domain_score:196.2 name:TIGR00678;
14293 13667 CDS
ID metaerg.pl|07864
allec_ids 2.7.4.9;
allgo_ids GO:0005524; GO:0004798; GO:0006233; GO:0006235;
allko_ids K00943;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725549.1 5 208 evalue:2.1e-67 qcov:98.10 identity:66.20;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-6545; P1-PWY; PWY0-166;
metacyc_pathway_name pyrimidine deoxyribonucleotides de novo biosynthesis III;; ; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);;
metacyc_pathway_type Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;; ; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF02223;
pfam_desc Thymidylate kinase;
pfam_id Thymidylate_kin;
pfam_target db:Pfam-A.hmm|PF02223.17 evalue:1.5e-50 score:170.7 best_domain_score:170.5 name:Thymidylate_kin;
sprot_desc Thymidylate kinase;
sprot_id sp|Q1QX49|KTHY_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QX49|KTHY_CHRSD 1 207 evalue:3.2e-54 qcov:99.50 identity:56.20;
tigrfam_acc TIGR00041;
tigrfam_desc dTMP kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name DTMP_kinase;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00041 evalue:1.7e-50 score:170.7 best_domain_score:170.5 name:TIGR00041;
15288 14290 CDS
ID metaerg.pl|07865
allec_ids 4.2.2.-;
allgo_ids GO:0005887; GO:0005886; GO:0016829; GO:0008932; GO:0071555; GO:0009252; GO:0000270;
allko_ids K07082;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725548.1 1 331 evalue:2.7e-125 qcov:99.70 identity:64.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF02618;
pfam_desc YceG-like family;
pfam_id YceG;
pfam_target db:Pfam-A.hmm|PF02618.16 evalue:4.7e-77 score:258.5 best_domain_score:258.3 name:YceG;
sp YES;
sprot_desc Endolytic murein transglycosylase;
sprot_id sp|P44720|MLTG_HAEIN;
sprot_target db:uniprot_sprot|sp|P44720|MLTG_HAEIN 1 332 evalue:2.9e-57 qcov:100.00 identity:37.50;
tigrfam_acc TIGR00247;
tigrfam_desc conserved hypothetical protein, YceG family;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00247;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00247 evalue:2.1e-73 score:246.5 best_domain_score:246.1 name:TIGR00247;
tm_num 1;
14290 14340 signal_peptide
ID metaerg.pl|07866
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
15288 14290 transmembrane_helix
ID metaerg.pl|07867
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology i14302-14358o;
16097 15291 CDS
ID metaerg.pl|07868
allec_ids 4.1.3.38;
allgo_ids GO:0003824; GO:0008696; GO:0030170; GO:0046656; GO:0046654;
allko_ids K02619;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725547.1 3 268 evalue:5.4e-76 qcov:99.30 identity:54.90;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id FOLSYN-PWY; ALL-CHORISMATE-PWY; PWY-6543;
metacyc_pathway_name superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;; 4-aminobenzoate biosynthesis;;
metacyc_pathway_type Folate-Biosynthesis; Super-Pathways;; Super-Pathways;; Folate-Biosynthesis;;
pfam_acc PF01063;
pfam_desc Amino-transferase class IV;
pfam_id Aminotran_4;
pfam_target db:Pfam-A.hmm|PF01063.19 evalue:2.3e-35 score:121.7 best_domain_score:121.5 name:Aminotran_4;
sprot_desc Aminodeoxychorismate lyase;
sprot_id sp|P28305|PABC_ECOLI;
sprot_target db:uniprot_sprot|sp|P28305|PABC_ECOLI 5 241 evalue:2.1e-26 qcov:88.40 identity:32.40;
tigrfam_acc TIGR03461;
tigrfam_desc aminodeoxychorismate lyase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name pabC_Proteo;
tigrfam_sub1role Folic acid;
tigrfam_target db:TIGRFAMs.hmm|TIGR03461 evalue:1.9e-54 score:183.8 best_domain_score:183.6 name:TIGR03461;
17451 16090 CDS
ID metaerg.pl|07869
allec_ids 4.1.3.27; 2.6.1.85;
allgo_ids GO:0009058; GO:0004049; GO:0046872; GO:0000162;
allko_ids K13501; K01658; K13503; K13950; K13497; K01656; K01663; K01664; K01665; K03342; K02619; K01657;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725546.1 12 450 evalue:1.9e-142 qcov:96.90 identity:62.10;
kegg_pathway_id 00400; 00790; 00620; 02020;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Folate biosynthesis; Pyruvate metabolism; Two-component system - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id TRPSYN-PWY; ALL-CHORISMATE-PWY; PWY-6543; FOLSYN-PWY; COMPLETE-ARO-PWY; PWY-5958;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of chorismate metabolism;; 4-aminobenzoate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of aromatic amino acid biosynthesis;; acridone alkaloid biosynthesis;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Super-Pathways;; Folate-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; ALKALOIDS-SYN;;
pfam_acc PF04715; PF00425;
pfam_desc Anthranilate synthase component I, N terminal region; chorismate binding enzyme;
pfam_id Anth_synt_I_N; Chorismate_bind;
pfam_target db:Pfam-A.hmm|PF04715.13 evalue:1e-08 score:34.8 best_domain_score:33.7 name:Anth_synt_I_N; db:Pfam-A.hmm|PF00425.18 evalue:3.8e-93 score:311.0 best_domain_score:310.6 name:Chorismate_bind;
sprot_desc Anthranilate synthase component I-like protein;
sprot_id sp|P74130|TRE2_SYNY3;
sprot_target db:uniprot_sprot|sp|P74130|TRE2_SYNY3 42 450 evalue:9.9e-77 qcov:90.30 identity:42.10;
tigrfam_acc TIGR01824;
tigrfam_desc aminodeoxychorismate synthase, component I;
tigrfam_name PabB-clade2;
tigrfam_target db:TIGRFAMs.hmm|TIGR01824 evalue:1.8e-123 score:411.5 best_domain_score:411.2 name:TIGR01824;
18730 17483 CDS
ID metaerg.pl|07870
allec_ids 2.3.1.179;
allgo_ids GO:0033817; GO:0006633;
allko_ids K09458;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725545.1 1 413 evalue:2.8e-204 qcov:99.50 identity:84.50;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-5973; PWYG-321; PWY-6113; PWY-6285;
metacyc_pathway_name cis-vaccenate biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);;
metacyc_pathway_type Unsaturated-Fatty-Acids-Biosynthesis;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00109; PF02801;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain;
pfam_id ketoacyl-synt; Ketoacyl-synt_C;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:7.8e-61 score:205.1 best_domain_score:204.3 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:1.1e-38 score:131.1 best_domain_score:130.2 name:Ketoacyl-synt_C;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] synthase 2;
sprot_id sp|P0AAI7|FABF_ECO57;
sprot_target db:uniprot_sprot|sp|P0AAI7|FABF_ECO57 2 413 evalue:6.4e-147 qcov:99.30 identity:60.50;
tigrfam_acc TIGR03150;
tigrfam_desc beta-ketoacyl-acyl-carrier-protein synthase II;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabF;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR03150 evalue:1.6e-191 score:635.6 best_domain_score:635.4 name:TIGR03150;
19029 18790 CDS
ID metaerg.pl|07871
allgo_ids GO:0005737; GO:0000036;
allko_ids K03955; K01909; K01586; K05939; K02078;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725544.1 1 79 evalue:4.1e-32 qcov:100.00 identity:97.50;
kegg_pathway_id 00564; 05012; 00071; 00300; 00190;
kegg_pathway_name Glycerophospholipid metabolism; Parkinson's disease; Fatty acid metabolism; Lysine biosynthesis; Oxidative phosphorylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00550;
pfam_desc Phosphopantetheine attachment site;
pfam_id PP-binding;
pfam_target db:Pfam-A.hmm|PF00550.25 evalue:2.4e-17 score:62.3 best_domain_score:62.1 name:PP-binding;
sprot_desc Acyl carrier protein;
sprot_id sp|P63446|ACP_XANAC;
sprot_target db:uniprot_sprot|sp|P63446|ACP_XANAC 1 76 evalue:1.6e-30 qcov:96.20 identity:90.80;
tigrfam_acc TIGR00517;
tigrfam_desc acyl carrier protein;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name acyl_carrier;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00517 evalue:1.8e-35 score:119.8 best_domain_score:119.7 name:TIGR00517;
19940 19191 CDS
ID metaerg.pl|07872
allec_ids 1.1.1.100;
allgo_ids GO:0003824; GO:0050662; GO:0102131; GO:0102132; GO:0004316; GO:0051287; GO:0050661; GO:0016616; GO:0030497; GO:0055114;
allko_ids K00022; K07535; K12420; K00059;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725543.1 1 249 evalue:2.6e-112 qcov:100.00 identity:82.70;
kegg_pathway_id 00310; 00280; 00281; 00632; 00930; 00380; 01040; 00062; 00650; 00061; 00071;
kegg_pathway_name Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Biosynthesis of unsaturated fatty acids; Fatty acid elongation in mitochondria; Butanoate metabolism; Fatty acid biosynthesis; Fatty acid metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id BIOTIN-BIOSYNTHESIS-PWY; PWYG-321; PWY-5989; PWY-5973; PWY-5367; PWY-6285; PWY-6113; PWY-6282; PWY0-881; PWY-5971; PWY-5156; FASYN-ELONG-PWY; PWY-6519;
metacyc_pathway_name biotin biosynthesis I;; mycolate biosynthesis;; stearate biosynthesis II (bacteria and plants);; cis-vaccenate biosynthesis;; petroselinate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate);; superpathway of fatty acid biosynthesis I (E. coli);; palmitate biosynthesis II (bacteria and plants);; superpathway of fatty acid biosynthesis II (plant);; fatty acid elongation -- saturated;; 8-amino-7-oxononanoate biosynthesis I;;
metacyc_pathway_type BIOTIN-SYN; Super-Pathways;; Fatty-acid-biosynthesis;; Stearate-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Palmitoleate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Palmitate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;;
pfam_acc PF00106; PF13561; PF01370; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain;
pfam_id adh_short; adh_short_C2; Epimerase; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:4.1e-55 score:185.5 best_domain_score:185.3 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:7e-63 score:211.5 best_domain_score:211.3 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:5.7e-05 score:21.9 best_domain_score:21.6 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:7.2e-20 score:70.9 best_domain_score:69.9 name:KR;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] reductase FabG;
sprot_id sp|O54438|FABG_PSEAE;
sprot_target db:uniprot_sprot|sp|O54438|FABG_PSEAE 9 249 evalue:1.2e-71 qcov:96.80 identity:59.20;
tigrfam_acc TIGR01830;
tigrfam_desc 3-oxoacyl-[acyl-carrier-protein] reductase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name 3oxo_ACP_reduc;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01830 evalue:5.1e-91 score:303.8 best_domain_score:303.6 name:TIGR01830;
20884 19946 CDS
ID metaerg.pl|07873
allec_ids 2.3.1.39;
allgo_ids GO:0005829; GO:0004314; GO:0006633;
allko_ids K00645;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725542.1 1 312 evalue:3.8e-113 qcov:100.00 identity:65.10;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id FASYN-INITIAL-PWY; PWY-6285; PWY-6113; PWY-5156; PWY0-881; PWY-4381;
metacyc_pathway_name superpathway of fatty acid biosynthesis initiation (E. coli);; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis II (plant);; superpathway of fatty acid biosynthesis I (E. coli);; fatty acid biosynthesis initiation I;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00698;
pfam_desc Acyl transferase domain;
pfam_id Acyl_transf_1;
pfam_target db:Pfam-A.hmm|PF00698.21 evalue:1.7e-37 score:128.9 best_domain_score:128.6 name:Acyl_transf_1;
sprot_desc Malonyl CoA-acyl carrier protein transacylase;
sprot_id sp|O85140|FABD_SALTY;
sprot_target db:uniprot_sprot|sp|O85140|FABD_SALTY 1 309 evalue:5.0e-96 qcov:99.00 identity:58.30;
tigrfam_acc TIGR00128;
tigrfam_desc malonyl CoA-acyl carrier protein transacylase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabD;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00128 evalue:6.4e-105 score:349.9 best_domain_score:349.7 name:TIGR00128;
21897 20932 CDS
ID metaerg.pl|07874
allec_ids 2.3.1.180;
allgo_ids GO:0004315; GO:0006633; GO:0005737; GO:0033818;
allko_ids K00648;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725541.1 1 321 evalue:8.9e-158 qcov:100.00 identity:87.50;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-4381; PWY0-881; PWY-6285; PWY-6113; BIOTIN-BIOSYNTHESIS-PWY; FASYN-INITIAL-PWY; PWY-6519; PWY-5156;
metacyc_pathway_name fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; biotin biosynthesis I;; superpathway of fatty acid biosynthesis initiation (E. coli);; 8-amino-7-oxononanoate biosynthesis I;; superpathway of fatty acid biosynthesis II (plant);;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; 7-Keto-8-aminopelargonate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF08545; PF08541; PF00108;
pfam_desc 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; Thiolase, N-terminal domain;
pfam_id ACP_syn_III; ACP_syn_III_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF08545.10 evalue:1.3e-34 score:117.1 best_domain_score:115.8 name:ACP_syn_III; db:Pfam-A.hmm|PF08541.10 evalue:6.1e-37 score:124.9 best_domain_score:120.9 name:ACP_syn_III_C; db:Pfam-A.hmm|PF00108.23 evalue:1e-09 score:37.4 best_domain_score:35.5 name:Thiolase_N;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] synthase 3;
sprot_id sp|Q8PBV1|FABH_XANCP;
sprot_target db:uniprot_sprot|sp|Q8PBV1|FABH_XANCP 1 321 evalue:1.1e-127 qcov:100.00 identity:70.10;
tigrfam_acc TIGR00747;
tigrfam_desc 3-oxoacyl-[acyl-carrier-protein] synthase III;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabH;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00747 evalue:1.5e-134 score:447.3 best_domain_score:447.1 name:TIGR00747;
22935 21934 CDS
ID metaerg.pl|07875
allec_ids 2.3.1.274;
allgo_ids GO:0003824; GO:0006633; GO:0016747; GO:0005737; GO:0043811; GO:0008654;
allko_ids K03621;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725540.1 14 333 evalue:1.8e-105 qcov:96.10 identity:64.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF02504;
pfam_desc Fatty acid synthesis protein;
pfam_id FA_synthesis;
pfam_target db:Pfam-A.hmm|PF02504.15 evalue:4.4e-78 score:261.8 best_domain_score:261.6 name:FA_synthesis;
sprot_desc Phosphate acyltransferase;
sprot_id sp|A5W716|PLSX_PSEP1;
sprot_target db:uniprot_sprot|sp|A5W716|PLSX_PSEP1 9 329 evalue:9.6e-61 qcov:96.40 identity:43.30;
tigrfam_acc TIGR00182;
tigrfam_desc fatty acid/phospholipid synthesis protein PlsX;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name plsX;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00182 evalue:4.9e-80 score:268.3 best_domain_score:268.2 name:TIGR00182;
23161 22952 CDS
ID metaerg.pl|07876
allgo_ids GO:0003735; GO:0006412; GO:0015934;
allko_ids K02911;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725539.1 1 69 evalue:8.6e-26 qcov:100.00 identity:88.40;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF01783;
pfam_desc Ribosomal L32p protein family;
pfam_id Ribosomal_L32p;
pfam_target db:Pfam-A.hmm|PF01783.23 evalue:2.7e-20 score:71.6 best_domain_score:71.4 name:Ribosomal_L32p;
sprot_desc 50S ribosomal protein L32;
sprot_id sp|A1WWF0|RL32_HALHL;
sprot_target db:uniprot_sprot|sp|A1WWF0|RL32_HALHL 1 53 evalue:3.0e-17 qcov:76.80 identity:79.20;
tigrfam_acc TIGR01031;
tigrfam_desc ribosomal protein bL32;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpmF_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01031 evalue:9.1e-19 score:66.6 best_domain_score:66.4 name:TIGR01031;
23689 23186 CDS
ID metaerg.pl|07877
allgo_ids GO:0042254;
allko_ids K07040;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725538.1 1 163 evalue:2.2e-51 qcov:97.60 identity:63.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF02620;
pfam_desc Large ribosomal RNA subunit accumulation protein YceD;
pfam_id YceD;
pfam_target db:Pfam-A.hmm|PF02620.17 evalue:3e-09 score:36.3 best_domain_score:35.4 name:YceD;
sprot_desc Large ribosomal RNA subunit accumulation protein YceD;
sprot_id sp|P0AB30|YCED_ECO57;
sprot_target db:uniprot_sprot|sp|P0AB30|YCED_ECO57 6 163 evalue:2.3e-10 qcov:94.60 identity:32.00;
23748 24350 CDS
ID metaerg.pl|07878
allec_ids 3.6.1.-;
allgo_ids GO:0047429; GO:0005737; GO:0009117;
allko_ids K06287;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725537.1 6 194 evalue:6.5e-50 qcov:94.50 identity:58.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-6147; PWY-6502; ALL-CHORISMATE-PWY; PWY-6383; FOLSYN-PWY; PWY-6404; PWY-5354;
metacyc_pathway_name 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; oxidized GTP and dGTP detoxification;; superpathway of chorismate metabolism;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ;
metacyc_pathway_type 6-HM-Dihydropterin-PP-Biosynthesis;; Detoxification; Metabolic-Clusters;; Super-Pathways;; Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; ;
pfam_acc PF02545;
pfam_desc Maf-like protein;
pfam_id Maf;
pfam_target db:Pfam-A.hmm|PF02545.14 evalue:4.4e-41 score:139.7 best_domain_score:139.6 name:Maf;
sprot_desc 7-methyl-GTP pyrophosphatase;
sprot_id sp|Q126I4|NTPPB_POLSJ;
sprot_target db:uniprot_sprot|sp|Q126I4|NTPPB_POLSJ 11 199 evalue:4.9e-44 qcov:94.50 identity:49.20;
tigrfam_acc TIGR00172;
tigrfam_desc septum formation protein Maf;
tigrfam_mainrole Cellular processes;
tigrfam_name maf;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR00172 evalue:8.8e-42 score:141.9 best_domain_score:141.5 name:TIGR00172;
24455 26455 CDS
ID metaerg.pl|07879
allec_ids 4.2.1.17; 5.1.2.3; 1.1.1.35;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0005737; GO:0008692; GO:0004300; GO:0051287; GO:0006635;
allko_ids K07516; K01782; K01692; K00022; K13767; K15016; K05556; K13816; K07514; K07511; K01825; K10527; K07515;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725536.1 2 666 evalue:0.0e+00 qcov:99.80 identity:82.60;
kegg_pathway_id 00930; 00632; 00380; 00310; 00281; 00280; 00650; 00640; 01057; 00071; 00592; 00410; 01040; 00903; 00062;
kegg_pathway_name Caprolactam degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Butanoate metabolism; Propanoate metabolism; Biosynthesis of type II polyketide products; Fatty acid metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Fatty acid elongation in mitochondria;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id VALDEG-PWY; PWY-5138; P3-PWY; TRYPTOPHAN-DEGRADATION-1; PWY-6435; CENTFERM-PWY; PWY-561; PWY-5184; PWY-5789; PWY-5136; GLUDEG-II-PWY; PWY-5177; FAO-PWY; ILEUDEG-PWY;
metacyc_pathway_name L-valine degradation I;; unsaturated, even numbered fatty acid β-oxidation;; gallate degradation III (anaerobic);; L-tryptophan degradation III (eukaryotic);; 4-hydroxybenzoate biosynthesis III (plants);; pyruvate fermentation to butanoate;; superpathway of glyoxylate cycle and fatty acid degradation;; toluene degradation VI (anaerobic);; 3-hydroxypropanoate/4-hydroxybutanate cycle;; fatty acid β-oxidation II (peroxisome);; L-glutamate degradation VII (to butanoate);; glutaryl-CoA degradation;; fatty acid β-oxidation I;; L-isoleucine degradation I;;
metacyc_pathway_type VALINE-DEG;; Fatty-Acid-Degradation;; GALLATE-DEG;; Super-Pathways; TRYPTOPHAN-DEG;; 4-Hydroxybenzoate-Biosynthesis;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Autotrophic-CO2-Fixation;; Fatty-Acid-Degradation;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; CARBOXYLATES-DEG;; Fatty-Acid-Degradation;; ISOLEUCINE-DEG;;
pfam_acc PF00725; PF02737; PF00378; PF16113; PF03446;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id 3HCDH; 3HCDH_N; ECH_1; ECH_2; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF00725.22 evalue:6.4e-27 score:93.3 best_domain_score:91.4 name:3HCDH; db:Pfam-A.hmm|PF02737.18 evalue:6.7e-46 score:155.7 best_domain_score:155.1 name:3HCDH_N; db:Pfam-A.hmm|PF00378.20 evalue:2.9e-30 score:104.6 best_domain_score:102.9 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:4e-19 score:68.5 best_domain_score:67.6 name:ECH_2; db:Pfam-A.hmm|PF03446.15 evalue:0.00012 score:21.5 best_domain_score:20.3 name:NAD_binding_2;
sprot_desc Fatty acid oxidation complex subunit alpha;
sprot_id sp|Q7N288|FADJ_PHOLL;
sprot_target db:uniprot_sprot|sp|Q7N288|FADJ_PHOLL 21 652 evalue:2.2e-93 qcov:94.90 identity:34.70;
26455 27735 CDS
ID metaerg.pl|07880
allec_ids 2.3.1.16;
allgo_ids GO:0016747; GO:0005737; GO:0003988; GO:0006635;
allko_ids K00626; K00632; K07509; K07550; K07513;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725535.1 1 426 evalue:2.8e-207 qcov:100.00 identity:85.20;
kegg_pathway_id 00632; 00120; 00380; 00640; 00650; 00592; 00362; 01040; 00620; 00062; 00310; 00281; 00280; 00071; 02020; 00072;
kegg_pathway_name Benzoate degradation via CoA ligation; Bile acid biosynthesis; Tryptophan metabolism; Propanoate metabolism; Butanoate metabolism; alpha-Linolenic acid metabolism; Benzoate degradation via hydroxylation; Biosynthesis of unsaturated fatty acids; Pyruvate metabolism; Fatty acid elongation in mitochondria; Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Fatty acid metabolism; Two-component system - General; Synthesis and degradation of ketone bodies;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-5136; PWY-561; FAO-PWY; PWY-6435;
metacyc_pathway_name fatty acid β-oxidation II (peroxisome);; superpathway of glyoxylate cycle and fatty acid degradation;; fatty acid β-oxidation I;; 4-hydroxybenzoate biosynthesis III (plants);;
metacyc_pathway_type Fatty-Acid-Degradation;; Energy-Metabolism; Super-Pathways;; Fatty-Acid-Degradation;; 4-Hydroxybenzoate-Biosynthesis;;
pfam_acc PF00109; PF02803; PF00108;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id ketoacyl-synt; Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:7.3e-05 score:21.7 best_domain_score:17.2 name:ketoacyl-synt; db:Pfam-A.hmm|PF02803.18 evalue:4.9e-32 score:109.4 best_domain_score:107.5 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:9.5e-54 score:181.7 best_domain_score:179.5 name:Thiolase_N;
sprot_desc 3-ketoacyl-CoA thiolase;
sprot_id sp|Q5QXN5|FADI_IDILO;
sprot_target db:uniprot_sprot|sp|Q5QXN5|FADI_IDILO 8 425 evalue:2.1e-89 qcov:98.10 identity:42.70;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:1.1e-112 score:375.9 best_domain_score:375.8 name:TIGR01930;
29267 27993 CDS
ID metaerg.pl|07881
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725534.1 1 421 evalue:4.8e-119 qcov:99.30 identity:57.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:3.9e-50 score:170.1 best_domain_score:169.9 name:DctM;
sprot_desc C4-dicarboxylate TRAP transporter large permease protein DctM;
sprot_id sp|O07838|DCTM_RHOCA;
sprot_target db:uniprot_sprot|sp|O07838|DCTM_RHOCA 1 423 evalue:5.7e-34 qcov:99.80 identity:28.60;
tm_num 11;
29267 27993 transmembrane_helix
ID metaerg.pl|07882
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology i27999-28067o28125-28193i28227-28295o28305-28358i28395-28463o28506-28574i28635-28703o28800-28868i28926-29021o29064-29132i29169-29237o;
29800 29264 CDS
ID metaerg.pl|07883
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725533.1 8 178 evalue:1.8e-30 qcov:96.10 identity:44.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:5.1e-18 score:64.5 best_domain_score:64.5 name:DctQ;
tm_num 4;
29800 29264 transmembrane_helix
ID metaerg.pl|07884
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology i29321-29389o29432-29500i29558-29626o29669-29737i;
30654 29800 CDS
ID metaerg.pl|07885
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725531.1 1 284 evalue:1.7e-88 qcov:100.00 identity:60.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF16811;
pfam_desc TRAP transporter T-component;
pfam_id TAtT;
pfam_target db:Pfam-A.hmm|PF16811.5 evalue:3.1e-54 score:183.2 best_domain_score:182.9 name:TAtT;
sp YES;
29800 29844 lipoprotein_signal_peptide
ID metaerg.pl|07886
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
31520 30651 CDS
ID metaerg.pl|07887
allec_ids 1.5.1.5; 3.5.4.9;
allgo_ids GO:0004488; GO:0055114; GO:0004477; GO:0000105; GO:0009086; GO:0006164; GO:0035999;
allko_ids K13403; K00288; K01491; K01938; K13402;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169563.1 1 289 evalue:3.1e-133 qcov:100.00 identity:82.70;
kegg_pathway_id 00630; 00670;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; One carbon pool by folate;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-6146; PWY-6142; PWY-1722; FOLSYN-PWY; 1CMET2-PWY; ALL-CHORISMATE-PWY; PWY-3841; P164-PWY; PWY-5030; CODH-PWY; PWY-2201; PWY-5497; PWY-1882;
metacyc_pathway_name Methanobacterium thermoautotrophicum biosynthetic metabolism;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; formate assimilation into 5,10-methylenetetrahydrofolate;; superpathway of tetrahydrofolate biosynthesis and salvage;; N10-formyl-tetrahydrofolate biosynthesis;; superpathway of chorismate metabolism;; folate transformations II;; purine nucleobases degradation I (anaerobic);; L-histidine degradation III;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; folate transformations I;; purine nucleobases degradation II (anaerobic);; superpathway of C1 compounds oxidation to CO2;;
metacyc_pathway_type Biosynthesis; Super-Pathways;; Gluconeogenesis; Super-Pathways;; C1-COMPOUNDS;; Folate-Biosynthesis; Super-Pathways;; Folate-Biosynthesis;; Super-Pathways;; Folate-Transformations;; Fermentation; Purine-Degradation;; HISTIDINE-DEG;; Autotrophic-CO2-Fixation;; Folate-Transformations;; Fermentation; Purine-Degradation;; C1-COMPOUNDS; Super-Pathways;;
pfam_acc PF00763; PF02882;
pfam_desc Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain;
pfam_id THF_DHG_CYH; THF_DHG_CYH_C;
pfam_target db:Pfam-A.hmm|PF00763.23 evalue:2.4e-37 score:127.0 best_domain_score:126.3 name:THF_DHG_CYH; db:Pfam-A.hmm|PF02882.19 evalue:5e-61 score:203.9 best_domain_score:203.4 name:THF_DHG_CYH_C;
sprot_desc Bifunctional protein FolD;
sprot_id sp|A1WUN4|FOLD_HALHL;
sprot_target db:uniprot_sprot|sp|A1WUN4|FOLD_HALHL 6 282 evalue:2.2e-93 qcov:95.80 identity:63.20;
31583 32071 CDS
ID metaerg.pl|07888
allec_ids 1.11.1.22;
allgo_ids GO:0004602; GO:0006979; GO:0055114; GO:0005829; GO:0005739; GO:0004601; GO:0034599;
allko_ids K00432; K20207;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725529.1 1 162 evalue:2.1e-70 qcov:100.00 identity:70.40;
kegg_pathway_id 00590; 00480;
kegg_pathway_name Arachidonic acid metabolism; Glutathione metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00255;
pfam_desc Glutathione peroxidase;
pfam_id GSHPx;
pfam_target db:Pfam-A.hmm|PF00255.19 evalue:5.3e-33 score:112.1 best_domain_score:111.8 name:GSHPx;
sprot_desc Hydroperoxy fatty acid reductase gpx1;
sprot_id sp|P74250|GPX1_SYNY3;
sprot_target db:uniprot_sprot|sp|P74250|GPX1_SYNY3 3 157 evalue:6.6e-31 qcov:95.70 identity:39.90;
33183 32077 CDS
ID metaerg.pl|07889
allgo_ids GO:0016491; GO:0055114;
allko_ids K01069; K01738; K02439; K01802; K04564; K03148; K01007; K01011; K01760;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Rhodanobacter;s__Rhodanobacter sp002001125;
genomedb_acc GCF_002001125.1;
genomedb_target db:genomedb|GCF_002001125.1|WP_077555172.1 5 368 evalue:2.8e-107 qcov:98.90 identity:56.30;
kegg_pathway_id 00272; 00730; 00720; 00271; 00920; 00620; 00450; 00910;
kegg_pathway_name Cysteine metabolism; Thiamine metabolism; Reductive carboxylate cycle (CO2 fixation); Methionine metabolism; Sulfur metabolism; Pyruvate metabolism; Selenoamino acid metabolism; Nitrogen metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00581; PF03435; PF00899;
pfam_desc Rhodanese-like domain; Saccharopine dehydrogenase NADP binding domain; ThiF family;
pfam_id Rhodanese; Sacchrp_dh_NADP; ThiF;
pfam_target db:Pfam-A.hmm|PF00581.20 evalue:1.3e-14 score:53.9 best_domain_score:51.3 name:Rhodanese; db:Pfam-A.hmm|PF03435.18 evalue:8.1e-06 score:25.4 best_domain_score:23.8 name:Sacchrp_dh_NADP; db:Pfam-A.hmm|PF00899.21 evalue:5.4e-66 score:221.7 best_domain_score:221.3 name:ThiF;
34594 33188 CDS
ID metaerg.pl|07890
allgo_ids GO:0005524; GO:0016887; GO:0005525; GO:0042254;
allko_ids K00956; K00860; K00955; K03977;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725528.1 1 468 evalue:5.0e-194 qcov:100.00 identity:75.00;
kegg_pathway_id 00450; 00920; 00230;
kegg_pathway_name Selenoamino acid metabolism; Sulfur metabolism; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00005; PF04548; PF02492; PF00350; PF02421; PF00009; PF00625; PF14714; PF03308; PF01926; PF03193;
pfam_desc ABC transporter; AIG1 family; CobW/HypB/UreG, nucleotide-binding domain; Dynamin family; Ferrous iron transport protein B; Elongation factor Tu GTP binding domain; Guanylate kinase; KH-domain-like of EngA bacterial GTPase enzymes, C-terminal; Methylmalonyl Co-A mutase-associated GTPase MeaB; 50S ribosome-binding GTPase; RsgA GTPase;
pfam_id ABC_tran; AIG1; cobW; Dynamin_N; FeoB_N; GTP_EFTU; Guanylate_kin; KH_dom-like; MeaB; MMR_HSR1; RsgA_GTPase;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:5.2e-07 score:29.5 best_domain_score:14.1 name:ABC_tran; db:Pfam-A.hmm|PF04548.16 evalue:5.6e-07 score:28.3 best_domain_score:18.7 name:AIG1; db:Pfam-A.hmm|PF02492.19 evalue:3.2e-06 score:26.1 best_domain_score:12.1 name:cobW; db:Pfam-A.hmm|PF00350.23 evalue:2e-15 score:56.5 best_domain_score:20.6 name:Dynamin_N; db:Pfam-A.hmm|PF02421.18 evalue:1.8e-29 score:101.5 best_domain_score:55.1 name:FeoB_N; db:Pfam-A.hmm|PF00009.27 evalue:3.9e-20 score:71.4 best_domain_score:31.0 name:GTP_EFTU; db:Pfam-A.hmm|PF00625.21 evalue:3.7e-05 score:22.7 best_domain_score:18.2 name:Guanylate_kin; db:Pfam-A.hmm|PF14714.6 evalue:1.6e-22 score:78.8 best_domain_score:77.9 name:KH_dom-like; db:Pfam-A.hmm|PF03308.16 evalue:1.2e-06 score:26.9 best_domain_score:12.1 name:MeaB; db:Pfam-A.hmm|PF01926.23 evalue:8.7e-56 score:186.2 best_domain_score:96.2 name:MMR_HSR1; db:Pfam-A.hmm|PF03193.16 evalue:5.5e-08 score:32.1 best_domain_score:12.3 name:RsgA_GTPase;
sprot_desc GTPase Der;
sprot_id sp|B8GTN1|DER_THISH;
sprot_target db:uniprot_sprot|sp|B8GTN1|DER_THISH 4 464 evalue:4.0e-121 qcov:98.50 identity:50.80;
tigrfam_acc TIGR00231; TIGR00436; TIGR03594;
tigrfam_desc small GTP-binding protein domain; GTP-binding protein Era; ribosome-associated GTPase EngA;
tigrfam_mainrole Unknown function; Protein synthesis; Protein synthesis;
tigrfam_name small_GTP; era; GTPase_EngA;
tigrfam_sub1role General; Other; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:2.4e-47 score:159.9 best_domain_score:86.9 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00436 evalue:3.2e-42 score:143.9 best_domain_score:71.9 name:TIGR00436; db:TIGRFAMs.hmm|TIGR03594 evalue:4.2e-152 score:506.3 best_domain_score:506.1 name:TIGR03594;
35782 34616 CDS
ID metaerg.pl|07891
allgo_ids GO:0009279; GO:0043165; GO:0051205;
allko_ids K14028; K08852; K11715; K08860; K17713;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725527.1 1 387 evalue:5.7e-143 qcov:99.70 identity:61.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF01011; PF13360; PF13570;
pfam_desc PQQ enzyme repeat; PQQ-like domain; PQQ-like domain;
pfam_id PQQ; PQQ_2; PQQ_3;
pfam_target db:Pfam-A.hmm|PF01011.21 evalue:9.1e-22 score:75.1 best_domain_score:23.5 name:PQQ; db:Pfam-A.hmm|PF13360.6 evalue:2.6e-50 score:170.4 best_domain_score:150.9 name:PQQ_2; db:Pfam-A.hmm|PF13570.6 evalue:3.3e-20 score:71.2 best_domain_score:16.4 name:PQQ_3;
sp YES;
sprot_desc Outer membrane protein assembly factor BamB;
sprot_id sp|Q8P980|BAMB_XANCP;
sprot_target db:uniprot_sprot|sp|Q8P980|BAMB_XANCP 6 385 evalue:5.6e-36 qcov:97.90 identity:35.90;
tigrfam_acc TIGR03300;
tigrfam_desc outer membrane assembly lipoprotein YfgL;
tigrfam_mainrole Protein fate;
tigrfam_name assembly_YfgL;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR03300 evalue:2.7e-114 score:380.9 best_domain_score:380.7 name:TIGR03300;
34616 34672 lipoprotein_signal_peptide
ID metaerg.pl|07892
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
36432 35779 CDS
ID metaerg.pl|07893
allgo_ids GO:0005515; GO:0071575; GO:0032991;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725526.1 1 217 evalue:1.9e-74 qcov:100.00 identity:63.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00515; PF13428; PF13432; PF09976; PF13181;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat-like domain; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_14; TPR_16; TPR_21; TPR_8;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:6.4e-07 score:28.2 best_domain_score:14.7 name:TPR_1; db:Pfam-A.hmm|PF13428.6 evalue:7.1e-08 score:31.9 best_domain_score:16.8 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:8.5e-09 score:35.2 best_domain_score:20.7 name:TPR_16; db:Pfam-A.hmm|PF09976.9 evalue:2.3e-49 score:167.0 best_domain_score:166.6 name:TPR_21; db:Pfam-A.hmm|PF13181.6 evalue:2e-06 score:26.8 best_domain_score:12.4 name:TPR_8;
sprot_desc hypothetical protein;
sprot_id sp|P43989|Y370_HAEIN;
sprot_target db:uniprot_sprot|sp|P43989|Y370_HAEIN 7 206 evalue:6.6e-10 qcov:92.20 identity:24.80;
tm_num 1;
36432 35779 transmembrane_helix
ID metaerg.pl|07894
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology i35839-35907o;
37762 36485 CDS
ID metaerg.pl|07895
allec_ids 6.1.1.21;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004821; GO:0006427;
allko_ids K01892;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725525.1 1 411 evalue:6.2e-183 qcov:96.70 identity:77.20;
kegg_pathway_id 00970; 00340;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Histidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03129; PF00587; PF13393;
pfam_desc Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Histidyl-tRNA synthetase;
pfam_id HGTP_anticodon; tRNA-synt_2b; tRNA-synt_His;
pfam_target db:Pfam-A.hmm|PF03129.20 evalue:3.1e-09 score:36.1 best_domain_score:35.1 name:HGTP_anticodon; db:Pfam-A.hmm|PF00587.25 evalue:1.3e-22 score:79.9 best_domain_score:78.7 name:tRNA-synt_2b; db:Pfam-A.hmm|PF13393.6 evalue:3.1e-46 score:157.3 best_domain_score:156.5 name:tRNA-synt_His;
sprot_desc Histidine--tRNA ligase;
sprot_id sp|B8GTN4|SYH_THISH;
sprot_target db:uniprot_sprot|sp|B8GTN4|SYH_THISH 4 419 evalue:1.8e-136 qcov:97.90 identity:58.80;
tigrfam_acc TIGR00442;
tigrfam_desc histidine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name hisS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00442 evalue:4.4e-143 score:476.3 best_domain_score:476.1 name:TIGR00442;
38795 37863 CDS
ID metaerg.pl|07896
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169560.1 3 310 evalue:1.2e-55 qcov:99.40 identity:44.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF13464; PF13413;
pfam_desc Domain of unknown function (DUF4115); Helix-turn-helix domain;
pfam_id DUF4115; HTH_25;
pfam_target db:Pfam-A.hmm|PF13464.6 evalue:1e-13 score:50.5 best_domain_score:49.9 name:DUF4115; db:Pfam-A.hmm|PF13413.6 evalue:1.8e-16 score:59.0 best_domain_score:54.1 name:HTH_25;
tm_num 1;
38795 37863 transmembrane_helix
ID metaerg.pl|07897
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology i38193-38261o;
39570 38788 CDS
ID metaerg.pl|07898
allgo_ids GO:0005515;
allko_ids K05864; K08884; K01802; K09571;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169558.1 15 260 evalue:1.8e-79 qcov:94.60 identity:62.90;
kegg_pathway_id 04020; 05012;
kegg_pathway_name Calcium signaling pathway; Parkinson's disease;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00515; PF13414; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF13174; PF13176; PF13181;
pfam_desc Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:1.1e-13 score:49.6 best_domain_score:19.8 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:2.6e-15 score:55.1 best_domain_score:28.2 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:2.2e-11 score:43.1 best_domain_score:24.5 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:2e-15 score:55.4 best_domain_score:19.9 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:1e-08 score:34.9 best_domain_score:22.9 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:2.1e-15 score:55.1 best_domain_score:23.4 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:5.4e-21 score:74.1 best_domain_score:34.0 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:6.4e-21 score:72.0 best_domain_score:24.3 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:2e-08 score:33.6 best_domain_score:12.0 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:3e-07 score:29.3 best_domain_score:14.7 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:4.9e-11 score:41.2 best_domain_score:20.3 name:TPR_8;
sp YES;
tigrfam_acc TIGR02521;
tigrfam_desc type IV pilus biogenesis/stability protein PilW;
tigrfam_name type_IV_pilW;
tigrfam_target db:TIGRFAMs.hmm|TIGR02521 evalue:5.8e-70 score:234.6 best_domain_score:234.4 name:TIGR02521;
38788 38841 lipoprotein_signal_peptide
ID metaerg.pl|07899
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
40685 39567 CDS
ID metaerg.pl|07900
allec_ids 2.1.1.192;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0070040; GO:0019843; GO:0002935; GO:0000049; GO:0070475;
allko_ids K06941;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725522.1 1 372 evalue:9.9e-169 qcov:100.00 identity:79.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF04055;
pfam_desc Radical SAM superfamily;
pfam_id Radical_SAM;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:1.4e-18 score:67.0 best_domain_score:66.1 name:Radical_SAM;
sprot_desc Dual-specificity RNA methyltransferase RlmN;
sprot_id sp|Q603C0|RLMN_METCA;
sprot_target db:uniprot_sprot|sp|Q603C0|RLMN_METCA 3 358 evalue:2.4e-121 qcov:95.70 identity:59.00;
tigrfam_acc TIGR00048;
tigrfam_desc 23S rRNA (adenine(2503)-C(2))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name rRNA_mod_RlmN;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00048 evalue:4.4e-129 score:429.6 best_domain_score:429.4 name:TIGR00048;
41125 40706 CDS
ID metaerg.pl|07901
allec_ids 2.7.4.6;
allgo_ids GO:0005737; GO:0005524; GO:0046872; GO:0004550; GO:0006241; GO:0006183; GO:0006228;
allko_ids K00940;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725521.1 1 139 evalue:1.3e-65 qcov:100.00 identity:92.80;
kegg_pathway_id 00240; 00230;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY0-162; PWY-6125; PPGPPMET-PWY; PWY-6126; PWY0-163; PWY-5687; PWY0-166; PWY-6545; PRPP-PWY;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; superpathway of guanosine nucleotides de novo biosynthesis II;; ppGpp biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;; ; ; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);; pyrimidine deoxyribonucleotides de novo biosynthesis III;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Metabolic-Regulators;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; ; ; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;; Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;; Super-Pathways;;
pfam_acc PF00334;
pfam_desc Nucleoside diphosphate kinase;
pfam_id NDK;
pfam_target db:Pfam-A.hmm|PF00334.19 evalue:4.2e-56 score:187.9 best_domain_score:187.8 name:NDK;
sprot_desc Nucleoside diphosphate kinase;
sprot_id sp|Q2SWE7|NDK_BURTA;
sprot_target db:uniprot_sprot|sp|Q2SWE7|NDK_BURTA 1 139 evalue:4.3e-55 qcov:100.00 identity:77.70;
41502 42875 CDS
ID metaerg.pl|07902
allec_ids 1.8.5.-;
allgo_ids GO:0016491; GO:0055114; GO:0005743; GO:0005739; GO:0071949; GO:0048038; GO:0070224; GO:0070813; GO:0070221;
allko_ids K00356; K03885; K22470;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Ectothiorhodospira;s__Ectothiorhodospira marina;
genomedb_acc GCF_900109495.1;
genomedb_target db:genomedb|GCF_900109495.1|WP_090253576.1 24 457 evalue:1.4e-167 qcov:95.00 identity:66.10;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id P222-PWY; PWY-5294;
metacyc_pathway_name sulfide oxidation I (sulfide-quinone reductase);; superpathway of sulfide oxidation (Acidithiobacillus ferrooxidans);;
metacyc_pathway_type CHEMOAUTOTROPHIC-ENERGY-METABOLISM; Sulfide-Oxidation;; Sulfide-Oxidation; Super-Pathways;;
pfam_acc PF13450; PF07992;
pfam_desc NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id NAD_binding_8; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF13450.6 evalue:8.6e-05 score:21.9 best_domain_score:20.3 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:3.1e-20 score:71.8 best_domain_score:69.5 name:Pyr_redox_2;
sp YES;
sprot_desc Sulfide:quinone oxidoreductase, mitochondrial;
sprot_id sp|Q9R112|SQOR_MOUSE;
sprot_target db:uniprot_sprot|sp|Q9R112|SQOR_MOUSE 41 455 evalue:6.5e-68 qcov:90.80 identity:35.10;
41502 41660 signal_peptide
ID metaerg.pl|07903
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
42901 43251 CDS
ID metaerg.pl|07904
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF17336;
pfam_desc Family of unknown function (DUF5368);
pfam_id DUF5368;
pfam_target db:Pfam-A.hmm|PF17336.2 evalue:3.2e-06 score:26.5 best_domain_score:26.3 name:DUF5368;
tm_num 3;
42901 43251 transmembrane_helix
ID metaerg.pl|07905
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology o42943-43011i43048-43116o43159-43227i;
43248 44300 CDS
ID metaerg.pl|07906
allgo_ids GO:0015288; GO:0016020;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF13609;
pfam_desc Gram-negative porin;
pfam_id Porin_4;
pfam_target db:Pfam-A.hmm|PF13609.6 evalue:1.2e-19 score:70.5 best_domain_score:70.2 name:Porin_4;
sp YES;
43248 43322 signal_peptide
ID metaerg.pl|07907
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
44373 45662 CDS
ID metaerg.pl|07908
allec_ids 1.4.1.4;
allgo_ids GO:0006520; GO:0016491; GO:0055114; GO:0005737; GO:0004354; GO:0006537;
allko_ids K00262; K00260; K00261; K00263;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725681.1 1 425 evalue:3.6e-162 qcov:99.10 identity:64.90;
kegg_pathway_id 00471; 00280; 00910; 00251; 00290; 00330;
kegg_pathway_name D-Glutamine and D-glutamate metabolism; Valine, leucine and isoleucine degradation; Nitrogen metabolism; Glutamate metabolism; Valine, leucine and isoleucine biosynthesis; Arginine and proline metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-5913; PWY490-3; GLUTSYNIII-PWY; PWY-5675; PWY-5505;
metacyc_pathway_name partial TCA cycle (obligate autotrophs);; nitrate reduction VI (assimilatory);; L-glutamate biosynthesis III;; nitrate reduction V (assimilatory);; L-glutamate and L-glutamine biosynthesis;;
metacyc_pathway_type TCA-VARIANTS;; Nitrate-Reduction;; GLUTAMATE-SYN;; Nitrate-Reduction;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;;
pfam_acc PF00208; PF02812;
pfam_desc Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF00208.21 evalue:5.3e-68 score:228.6 best_domain_score:228.3 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:4e-54 score:181.2 best_domain_score:180.2 name:ELFV_dehydrog_N;
sprot_desc NADP-specific glutamate dehydrogenase;
sprot_id sp|P54386|DHE4_SYNY3;
sprot_target db:uniprot_sprot|sp|P54386|DHE4_SYNY3 1 425 evalue:1.3e-134 qcov:99.10 identity:52.70;
46457 45825 CDS
ID metaerg.pl|07909
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Beggiatoales;f__Beggiatoaceae;g__Beggiatoa;s__Beggiatoa leptomitoformis;
genomedb_acc GCF_001305575.2;
genomedb_target db:genomedb|GCF_001305575.2|WP_062152433.1 9 207 evalue:2.0e-49 qcov:94.80 identity:51.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
sp YES;
45825 45890 signal_peptide
ID metaerg.pl|07910
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
47171 46560 CDS
ID metaerg.pl|07911
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Caldalkalibacillales;f__Caldalkalibacillaceae;g__Bacillus_AT;s__Bacillus_AT mannanilyticus;
genomedb_acc GCF_000615945.1;
genomedb_target db:genomedb|GCF_000615945.1|WP_025027468.1 2 203 evalue:3.3e-17 qcov:99.50 identity:29.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
tm_num 5;
47171 46560 transmembrane_helix
ID metaerg.pl|07912
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology i46716-46775o46818-46886i46944-47012o47022-47090i47109-47162o;
48996 47287 CDS
ID metaerg.pl|07913
allec_ids 3.1.-.-;
allgo_ids GO:0003676; GO:0045145; GO:0006310; GO:0006281; GO:0010165;
allko_ids K07462;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725520.1 2 566 evalue:3.4e-237 qcov:99.30 identity:73.50;
kegg_pathway_id 03410; 03430; 03440;
kegg_pathway_name Base excision repair; Mismatch repair; Homologous recombination;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01368; PF02272; PF17768;
pfam_desc DHH family; DHHA1 domain; RecJ OB domain;
pfam_id DHH; DHHA1; RecJ_OB;
pfam_target db:Pfam-A.hmm|PF01368.20 evalue:8.5e-07 score:28.4 best_domain_score:27.5 name:DHH; db:Pfam-A.hmm|PF02272.19 evalue:8.8e-24 score:83.7 best_domain_score:82.3 name:DHHA1; db:Pfam-A.hmm|PF17768.1 evalue:1.3e-19 score:69.6 best_domain_score:68.9 name:RecJ_OB;
sprot_desc Single-stranded-DNA-specific exonuclease RecJ;
sprot_id sp|P21893|RECJ_ECOLI;
sprot_target db:uniprot_sprot|sp|P21893|RECJ_ECOLI 1 564 evalue:6.3e-145 qcov:99.10 identity:49.90;
tigrfam_acc TIGR00644;
tigrfam_desc single-stranded-DNA-specific exonuclease RecJ;
tigrfam_mainrole DNA metabolism;
tigrfam_name recJ;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00644 evalue:5e-139 score:463.2 best_domain_score:463.0 name:TIGR00644;
49892 48993 CDS
ID metaerg.pl|07914
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725519.1 1 293 evalue:2.3e-67 qcov:98.00 identity:47.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
50410 49931 CDS
ID metaerg.pl|07915
allgo_ids GO:0003677; GO:0032784; GO:0070063;
allko_ids K03624;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725518.1 1 158 evalue:5.9e-62 qcov:99.40 identity:79.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF01272; PF03449;
pfam_desc Transcription elongation factor, GreA/GreB, C-term; Transcription elongation factor, N-terminal;
pfam_id GreA_GreB; GreA_GreB_N;
pfam_target db:Pfam-A.hmm|PF01272.19 evalue:9e-23 score:79.2 best_domain_score:78.7 name:GreA_GreB; db:Pfam-A.hmm|PF03449.15 evalue:1.9e-32 score:110.5 best_domain_score:109.8 name:GreA_GreB_N;
sprot_desc Transcription elongation factor GreA;
sprot_id sp|B8GNX7|GREA_THISH;
sprot_target db:uniprot_sprot|sp|B8GNX7|GREA_THISH 1 158 evalue:1.1e-49 qcov:99.40 identity:64.60;
tigrfam_acc TIGR01462;
tigrfam_desc transcription elongation factor GreA;
tigrfam_mainrole Transcription;
tigrfam_name greA;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR01462 evalue:3e-52 score:175.9 best_domain_score:175.7 name:TIGR01462;
53640 50407 CDS
ID metaerg.pl|07916
allec_ids 6.3.5.5;
allgo_ids GO:0005524; GO:0046872; GO:0004088; GO:0044205; GO:0006526;
allko_ids K01959; K01941; K01955; K01945; K01965; K11541; K01589; K13713; K01968; K01960; K00609; K01958; K11540; K01948; K01921; K01954; K01956; K01940;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725517.1 1 1073 evalue:0.0e+00 qcov:99.60 identity:86.90;
kegg_pathway_id 00020; 00240; 00230; 00280; 00550; 00640; 00252; 00251; 00220; 00330; 00620; 00473; 00910;
kegg_pathway_name Citrate cycle (TCA cycle); Pyrimidine metabolism; Purine metabolism; Valine, leucine and isoleucine degradation; Peptidoglycan biosynthesis; Propanoate metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Urea cycle and metabolism of amino groups; Arginine and proline metabolism; Pyruvate metabolism; D-Alanine metabolism; Nitrogen metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-5154; PRPP-PWY; PWY-5686; ARGSYN-PWY; PWY0-162; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN;
metacyc_pathway_name L-arginine biosynthesis III (via N-acetyl-L-citrulline);; superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;; L-arginine biosynthesis I (via L-ornithine);; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;;
metacyc_pathway_type ARGININE-SYN;; Super-Pathways;; UMP-Biosynthesis;; ARGININE-SYN; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;;
pfam_acc PF02222; PF02655; PF15632; PF02786; PF02787; PF07478; PF01071; PF02142; PF08443;
pfam_desc ATP-grasp domain; ATP-grasp domain; ATP-grasp in the biosynthetic pathway with Ter operon; Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; D-ala D-ala ligase C-terminus; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; MGS-like domain; RimK-like ATP-grasp domain;
pfam_id ATP-grasp; ATP-grasp_3; ATPgrasp_Ter; CPSase_L_D2; CPSase_L_D3; Dala_Dala_lig_C; GARS_A; MGS; RimK;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:1.8e-11 score:43.1 best_domain_score:30.6 name:ATP-grasp; db:Pfam-A.hmm|PF02655.14 evalue:1.5e-09 score:37.4 best_domain_score:24.5 name:ATP-grasp_3; db:Pfam-A.hmm|PF15632.6 evalue:1e-11 score:44.0 best_domain_score:26.8 name:ATPgrasp_Ter; db:Pfam-A.hmm|PF02786.17 evalue:2.7e-108 score:359.5 best_domain_score:239.9 name:CPSase_L_D2; db:Pfam-A.hmm|PF02787.19 evalue:4.2e-39 score:132.9 best_domain_score:131.7 name:CPSase_L_D3; db:Pfam-A.hmm|PF07478.13 evalue:3.5e-10 score:39.0 best_domain_score:19.5 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF01071.19 evalue:9.6e-06 score:24.7 best_domain_score:17.4 name:GARS_A; db:Pfam-A.hmm|PF02142.22 evalue:1e-18 score:66.5 best_domain_score:64.1 name:MGS; db:Pfam-A.hmm|PF08443.11 evalue:4.3e-07 score:28.9 best_domain_score:14.7 name:RimK;
sp YES;
sprot_desc Carbamoyl-phosphate synthase large chain;
sprot_id sp|P58942|CARB_XANAC;
sprot_target db:uniprot_sprot|sp|P58942|CARB_XANAC 1 1072 evalue:0.0e+00 qcov:99.50 identity:72.40;
tigrfam_acc TIGR01369;
tigrfam_desc carbamoyl-phosphate synthase, large subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name CPSaseII_lrg;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01369 evalue:0 score:1531.8 best_domain_score:1531.6 name:TIGR01369;
50407 50475 lipoprotein_signal_peptide
ID metaerg.pl|07917
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
54766 53627 CDS
ID metaerg.pl|07918
allec_ids 6.3.5.5;
allgo_ids GO:0016787; GO:0005524; GO:0004088; GO:0006207; GO:0044205; GO:0006526; GO:0006541;
allko_ids K13501; K01658; K01951; K13497; K13950; K11541; K01955; K01656; K01956; K01663; K01664; K01665; K01954; K00609; K11540; K01657; K03342; K02619;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169556.1 1 372 evalue:4.3e-159 qcov:98.20 identity:70.70;
kegg_pathway_id 00790; 02020; 00620; 00251; 00252; 00400; 00230; 00240; 00983;
kegg_pathway_name Folate biosynthesis; Two-component system - General; Pyruvate metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Purine metabolism; Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-5686; PRPP-PWY; PWY-5154; ARGSYN-PWY; PWY0-162; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN;
metacyc_pathway_name UMP biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;;
metacyc_pathway_type UMP-Biosynthesis;; Super-Pathways;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;;
pfam_acc PF00988; PF00117; PF07722;
pfam_desc Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; Peptidase C26;
pfam_id CPSase_sm_chain; GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00988.22 evalue:6.9e-50 score:167.4 best_domain_score:166.8 name:CPSase_sm_chain; db:Pfam-A.hmm|PF00117.28 evalue:7e-45 score:152.4 best_domain_score:151.9 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:8.3e-07 score:28.2 best_domain_score:23.1 name:Peptidase_C26;
sprot_desc Carbamoyl-phosphate synthase small chain;
sprot_id sp|B8GNX4|CARA_THISH;
sprot_target db:uniprot_sprot|sp|B8GNX4|CARA_THISH 1 373 evalue:5.9e-131 qcov:98.40 identity:61.00;
tigrfam_acc TIGR01368;
tigrfam_desc carbamoyl-phosphate synthase, small subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name CPSaseIIsmall;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01368 evalue:7.2e-139 score:461.9 best_domain_score:461.7 name:TIGR01368;
55423 54923 CDS
ID metaerg.pl|07919
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725515.1 1 165 evalue:1.5e-76 qcov:99.40 identity:84.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF06853;
pfam_desc Protein of unknown function (DUF1249);
pfam_id DUF1249;
pfam_target db:Pfam-A.hmm|PF06853.12 evalue:3.8e-20 score:71.3 best_domain_score:71.0 name:DUF1249;
56372 55557 CDS
ID metaerg.pl|07920
allec_ids 2.7.11.33;
allgo_ids GO:0005524; GO:0016772; GO:0043531; GO:0016776; GO:0004674; GO:0006470;
allko_ids K09773;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725514.1 1 269 evalue:7.3e-129 qcov:99.30 identity:86.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF03618;
pfam_desc Kinase/pyrophosphorylase;
pfam_id Kinase-PPPase;
pfam_target db:Pfam-A.hmm|PF03618.14 evalue:6e-72 score:241.7 best_domain_score:241.5 name:Kinase-PPPase;
sprot_desc Putative phosphoenolpyruvate synthase regulatory protein;
sprot_id sp|B4SMR2|PSRP_STRM5;
sprot_target db:uniprot_sprot|sp|B4SMR2|PSRP_STRM5 3 271 evalue:6.1e-82 qcov:99.30 identity:57.60;
56432 58783 CDS
ID metaerg.pl|07921
allec_ids 2.7.9.2;
allgo_ids GO:0016310; GO:0016772; GO:0005524; GO:0046872; GO:0008986; GO:0006094; GO:0006090;
allko_ids K08484; K02768; K08483; K00873; K02821; K02812; K02806; K01006; K01007; K02793; K11183; K02744; K11189; K11201; K02794;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725513.1 1 782 evalue:0.0e+00 qcov:99.90 identity:86.80;
kegg_pathway_id 00010; 00710; 00620; 02060; 00720; 00230;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Pyruvate metabolism; Phosphotransferase system (PTS); Reductive carboxylate cycle (CO2 fixation); Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id P461-PWY; GLYCOLYSIS-E-D; PWY-5484; GLYCOLYSIS; ANAEROFRUCAT-PWY; P441-PWY; GLUCONEO-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; P23-PWY;
metacyc_pathway_name hexitol fermentation to lactate, formate, ethanol and acetate;; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis II (from fructose 6-phosphate);; glycolysis I (from glucose 6-phosphate);; homolactic fermentation;; superpathway of N-acetylneuraminate degradation;; gluconeogenesis I;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; reductive TCA cycle I;;
metacyc_pathway_type Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; Gluconeogenesis;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;;
pfam_acc PF00391; PF02896; PF01326;
pfam_desc PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain;
pfam_id PEP-utilizers; PEP-utilizers_C; PPDK_N;
pfam_target db:Pfam-A.hmm|PF00391.23 evalue:7.8e-26 score:88.8 best_domain_score:87.7 name:PEP-utilizers; db:Pfam-A.hmm|PF02896.18 evalue:7.3e-59 score:198.5 best_domain_score:197.8 name:PEP-utilizers_C; db:Pfam-A.hmm|PF01326.19 evalue:7.6e-115 score:382.9 best_domain_score:382.4 name:PPDK_N;
sprot_desc Phosphoenolpyruvate synthase;
sprot_id sp|Q02KR1|PPSA_PSEAB;
sprot_target db:uniprot_sprot|sp|Q02KR1|PPSA_PSEAB 1 781 evalue:1.6e-312 qcov:99.70 identity:67.40;
tigrfam_acc TIGR01418;
tigrfam_desc phosphoenolpyruvate synthase;
tigrfam_mainrole Energy metabolism;
tigrfam_name PEP_synth;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01418 evalue:0 score:1175.8 best_domain_score:1175.6 name:TIGR01418;
58917 60740 CDS
ID metaerg.pl|07922
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Methylophagaceae;g__Methylophaga;s__Methylophaga lonarensis;
genomedb_acc GCF_000349205.1;
genomedb_target db:genomedb|GCF_000349205.1|WP_009727476.1 13 606 evalue:3.0e-162 qcov:97.90 identity:49.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF01464;
pfam_desc Transglycosylase SLT domain;
pfam_id SLT;
pfam_target db:Pfam-A.hmm|PF01464.20 evalue:4.7e-07 score:28.7 best_domain_score:27.8 name:SLT;
sp YES;
58917 58976 signal_peptide
ID metaerg.pl|07923
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
61294 60725 CDS
ID metaerg.pl|07924
allec_ids 3.1.-.-;
allgo_ids GO:0005737; GO:0000175; GO:0003676;
allko_ids K13288;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:7.7e-11 score:41.6 best_domain_score:41.0 name:DEDDh;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725512.1 1 181 evalue:2.9e-68 qcov:95.80 identity:71.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00929;
pfam_desc Exonuclease;
pfam_id RNase_T;
pfam_target db:Pfam-A.hmm|PF00929.24 evalue:4e-31 score:108.0 best_domain_score:107.6 name:RNase_T;
sprot_desc Oligoribonuclease;
sprot_id sp|Q3BTI2|ORN_XANC5;
sprot_target db:uniprot_sprot|sp|Q3BTI2|ORN_XANC5 4 181 evalue:3.4e-63 qcov:94.20 identity:68.00;
61351 62229 CDS
ID metaerg.pl|07925
allec_ids 3.6.1.-; 3.6.-.-;
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0046872; GO:0019843; GO:0042274;
allko_ids K06949;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725511.1 1 292 evalue:4.5e-100 qcov:100.00 identity:62.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id ALL-CHORISMATE-PWY; FOLSYN-PWY; PWY-6383; PWY-6147; PWY-6502; PWY-5354; PWY-6404;
metacyc_pathway_name superpathway of chorismate metabolism;; superpathway of tetrahydrofolate biosynthesis and salvage;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; oxidized GTP and dGTP detoxification;; ; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Super-Pathways;; Folate-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; 6-HM-Dihydropterin-PP-Biosynthesis;; Detoxification; Metabolic-Clusters;; ; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF01926; PF03193;
pfam_desc 50S ribosome-binding GTPase; RsgA GTPase;
pfam_id MMR_HSR1; RsgA_GTPase;
pfam_target db:Pfam-A.hmm|PF01926.23 evalue:1.1e-06 score:27.9 best_domain_score:27.0 name:MMR_HSR1; db:Pfam-A.hmm|PF03193.16 evalue:7.4e-44 score:148.8 best_domain_score:148.5 name:RsgA_GTPase;
sprot_desc Small ribosomal subunit biogenesis GTPase RsgA;
sprot_id sp|Q4QJM9|RSGA_HAEI8;
sprot_target db:uniprot_sprot|sp|Q4QJM9|RSGA_HAEI8 2 283 evalue:1.9e-52 qcov:96.60 identity:36.30;
tigrfam_acc TIGR00157;
tigrfam_desc ribosome small subunit-dependent GTPase A;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00157;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00157 evalue:2.8e-59 score:199.8 best_domain_score:199.6 name:TIGR00157;
62908 62240 CDS
ID metaerg.pl|07926
allgo_ids GO:0005576; GO:0030435;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725510.1 1 222 evalue:5.3e-85 qcov:100.00 identity:73.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00106; PF13561; PF04321;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; RmlD substrate binding domain;
pfam_id adh_short; adh_short_C2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:6.6e-30 score:103.3 best_domain_score:102.8 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.8e-25 score:88.5 best_domain_score:88.2 name:adh_short_C2; db:Pfam-A.hmm|PF04321.17 evalue:1.3e-05 score:23.7 best_domain_score:23.1 name:RmlD_sub_bind;
sprot_desc C-factor;
sprot_id sp|P21158|CSGA_MYXXA;
sprot_target db:uniprot_sprot|sp|P21158|CSGA_MYXXA 58 222 evalue:1.0e-21 qcov:74.30 identity:38.90;
63156 63476 CDS
ID metaerg.pl|07927
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727019.1 6 102 evalue:9.2e-27 qcov:91.50 identity:66.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
sp YES;
tm_num 1;
63156 63227 signal_peptide
ID metaerg.pl|07928
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
63156 63476 transmembrane_helix
ID metaerg.pl|07929
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology o63183-63242i;
63545 64480 CDS
ID metaerg.pl|07930
allgo_ids GO:0004668; GO:0009446;
allko_ids K10536;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725509.1 1 310 evalue:2.5e-112 qcov:99.70 identity:61.30;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF04371;
pfam_desc Porphyromonas-type peptidyl-arginine deiminase;
pfam_id PAD_porph;
pfam_target db:Pfam-A.hmm|PF04371.15 evalue:2e-80 score:269.7 best_domain_score:269.5 name:PAD_porph;
64477 65361 CDS
ID metaerg.pl|07931
allec_ids 3.5.1.53;
allgo_ids GO:0006807; GO:0050126; GO:0033388;
allko_ids K12251; K03820;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727018.1 5 293 evalue:4.3e-143 qcov:98.30 identity:80.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id POLYAMINSYN3-PWY; ARGDEG-III-PWY; PWY-43;
metacyc_pathway_name superpathway of polyamine biosynthesis II;; L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway);; putrescine biosynthesis II;;
metacyc_pathway_type Polyamine-Biosynthesis; Super-Pathways;; ARGININE-DEG;; Putrescine-Biosynthesis;;
pfam_acc PF00795;
pfam_desc Carbon-nitrogen hydrolase;
pfam_id CN_hydrolase;
pfam_target db:Pfam-A.hmm|PF00795.22 evalue:7.2e-59 score:198.5 best_domain_score:198.3 name:CN_hydrolase;
sprot_desc N-carbamoylputrescine amidase;
sprot_id sp|Q9XGI9|AGUB_SOLLC;
sprot_target db:uniprot_sprot|sp|Q9XGI9|AGUB_SOLLC 2 289 evalue:1.0e-61 qcov:98.00 identity:44.20;
66183 65593 CDS
ID metaerg.pl|07932
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiomicrospirales;f__Thiomicrospiraceae;g__Thiomicrorhabdus;s__Thiomicrorhabdus chilensis;
genomedb_acc GCF_000483485.1;
genomedb_target db:genomedb|GCF_000483485.1|WP_028486748.1 1 196 evalue:6.8e-60 qcov:100.00 identity:56.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF02525; PF03358;
pfam_desc Flavodoxin-like fold; NADPH-dependent FMN reductase;
pfam_id Flavodoxin_2; FMN_red;
pfam_target db:Pfam-A.hmm|PF02525.17 evalue:3.2e-38 score:130.7 best_domain_score:130.5 name:Flavodoxin_2; db:Pfam-A.hmm|PF03358.15 evalue:1e-11 score:44.0 best_domain_score:43.3 name:FMN_red;
66302 67681 CDS
ID metaerg.pl|07933
allec_ids 4.3.2.2;
allgo_ids GO:0004018; GO:0006188; GO:0005829; GO:0070626; GO:0044208; GO:0006189;
allko_ids K01756; K01857; K01679;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725507.1 1 458 evalue:1.3e-213 qcov:99.80 identity:81.00;
kegg_pathway_id 00020; 00230; 00252; 00720; 00362;
kegg_pathway_name Citrate cycle (TCA cycle); Purine metabolism; Alanine and aspartate metabolism; Reductive carboxylate cycle (CO2 fixation); Benzoate degradation via hydroxylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id P121-PWY; DENOVOPURINE2-PWY; PWY-6124; PWY-6123; PWY-841; PRPP-PWY; PWY-6126;
metacyc_pathway_name adenine and adenosine salvage I;; superpathway of purine nucleotides de novo biosynthesis II;; inosine-5'-phosphate biosynthesis II;; inosine-5'-phosphate biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Adenine-Adenosine-Salvage;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;; IMP-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF08328; PF00206;
pfam_desc Adenylosuccinate lyase C-terminal; Lyase;
pfam_id ASL_C; Lyase_1;
pfam_target db:Pfam-A.hmm|PF08328.11 evalue:2.2e-47 score:159.1 best_domain_score:158.2 name:ASL_C; db:Pfam-A.hmm|PF00206.20 evalue:1.6e-53 score:181.4 best_domain_score:180.9 name:Lyase_1;
sprot_desc Adenylosuccinate lyase;
sprot_id sp|Q9I0K9|PUR8_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I0K9|PUR8_PSEAE 1 455 evalue:5.0e-153 qcov:99.10 identity:58.60;
tigrfam_acc TIGR00928;
tigrfam_desc adenylosuccinate lyase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purB;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00928 evalue:5.8e-114 score:380.4 best_domain_score:380.2 name:TIGR00928;
67678 68808 CDS
ID metaerg.pl|07934
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725506.1 1 376 evalue:2.7e-105 qcov:100.00 identity:52.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF08007;
pfam_desc Cupin superfamily protein;
pfam_id Cupin_4;
pfam_target db:Pfam-A.hmm|PF08007.12 evalue:7.9e-64 score:215.3 best_domain_score:215.0 name:Cupin_4;
68936 71746 CDS
ID metaerg.pl|07935
allec_ids 1.2.4.2;
allgo_ids GO:0016624; GO:0004591; GO:0030976; GO:0006096; GO:0006099;
allko_ids K00164; K01616;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725505.1 1 934 evalue:0.0e+00 qcov:99.80 identity:82.30;
kegg_pathway_id 00310; 00380; 00020;
kegg_pathway_name Lysine degradation; Tryptophan metabolism; Citrate cycle (TCA cycle);
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-5084;
metacyc_pathway_name 2-oxoglutarate decarboxylation to succinyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF16078; PF00676; PF16870; PF02779;
pfam_desc 2-oxoglutarate dehydrogenase N-terminus; Dehydrogenase E1 component; 2-oxoglutarate dehydrogenase C-terminal; Transketolase, pyrimidine binding domain;
pfam_id 2-oxogl_dehyd_N; E1_dh; OxoGdeHyase_C; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF16078.5 evalue:2.3e-15 score:55.1 best_domain_score:54.1 name:2-oxogl_dehyd_N; db:Pfam-A.hmm|PF00676.20 evalue:6.8e-52 score:175.5 best_domain_score:174.9 name:E1_dh; db:Pfam-A.hmm|PF16870.5 evalue:4.5e-52 score:175.0 best_domain_score:174.3 name:OxoGdeHyase_C; db:Pfam-A.hmm|PF02779.24 evalue:1.4e-64 score:216.3 best_domain_score:215.6 name:Transket_pyr;
sprot_desc 2-oxoglutarate dehydrogenase E1 component;
sprot_id sp|P20707|ODO1_AZOVI;
sprot_target db:uniprot_sprot|sp|P20707|ODO1_AZOVI 5 930 evalue:2.1e-307 qcov:98.90 identity:55.50;
tigrfam_acc TIGR00239;
tigrfam_desc oxoglutarate dehydrogenase (succinyl-transferring), E1 component;
tigrfam_mainrole Energy metabolism;
tigrfam_name 2oxo_dh_E1;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR00239 evalue:0 score:1219.7 best_domain_score:1219.6 name:TIGR00239;
71756 72964 CDS
ID metaerg.pl|07936
allec_ids 2.3.1.61;
allgo_ids GO:0016746; GO:0045252; GO:0004149; GO:0033512; GO:0006099;
allko_ids K00382; K00162; K00163; K00658; K11381; K09699;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725504.1 1 402 evalue:7.9e-172 qcov:100.00 identity:81.60;
kegg_pathway_id 00020; 00260; 00290; 00310; 00010; 00280; 00650; 00620; 00252;
kegg_pathway_name Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Valine, leucine and isoleucine biosynthesis; Lysine degradation; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation; Butanoate metabolism; Pyruvate metabolism; Alanine and aspartate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-5084;
metacyc_pathway_name 2-oxoglutarate decarboxylation to succinyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF00198; PF00364; PF02817;
pfam_desc 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme; e3 binding domain;
pfam_id 2-oxoacid_dh; Biotin_lipoyl; E3_binding;
pfam_target db:Pfam-A.hmm|PF00198.23 evalue:3.8e-82 score:274.4 best_domain_score:274.1 name:2-oxoacid_dh; db:Pfam-A.hmm|PF00364.22 evalue:2.8e-19 score:68.0 best_domain_score:66.9 name:Biotin_lipoyl; db:Pfam-A.hmm|PF02817.17 evalue:1.1e-10 score:40.9 best_domain_score:40.9 name:E3_binding;
sprot_desc Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex;
sprot_id sp|Q9I3D2|ODO2_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I3D2|ODO2_PSEAE 1 400 evalue:6.9e-114 qcov:99.50 identity:57.70;
tigrfam_acc TIGR01347;
tigrfam_desc dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex;
tigrfam_mainrole Energy metabolism;
tigrfam_name sucB;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01347 evalue:1.1e-167 score:557.5 best_domain_score:554.9 name:TIGR01347;
73013 74440 CDS
ID metaerg.pl|07937
allec_ids 1.8.1.4;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0005737; GO:0004148; GO:0009055; GO:0050660; GO:0045454; GO:0006096;
allko_ids K00529; K00362; K00363; K00382; K01008; K00266; K00219; K03885; K00356; K00302; K00658; K00384; K00176; K03388; K00383;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725503.1 1 475 evalue:3.6e-232 qcov:100.00 identity:84.60;
kegg_pathway_id 00240; 00480; 00720; 00790; 00450; 00620; 00260; 00020; 00280; 00010; 00310; 00360; 00190; 00071; 00910; 00252; 00251;
kegg_pathway_name Pyrimidine metabolism; Glutathione metabolism; Reductive carboxylate cycle (CO2 fixation); Folate biosynthesis; Selenoamino acid metabolism; Pyruvate metabolism; Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Lysine degradation; Phenylalanine metabolism; Oxidative phosphorylation; Fatty acid metabolism; Nitrogen metabolism; Alanine and aspartate metabolism; Glutamate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY-5046; PYRUVDEHYD-PWY; GLYCLEAV-PWY; PWY-5173; PWY-5084; PWY-5464;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;; pyruvate decarboxylation to acetyl CoA;; glycine cleavage;; superpathway of acetyl-CoA biosynthesis;; 2-oxoglutarate decarboxylation to succinyl-CoA;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Respiration;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; GLYCINE-DEG;; Acetyl-CoA-Biosynthesis; Super-Pathways;; Respiration;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF02737; PF01262; PF00890; PF12831; PF01134; PF03486; PF13450; PF00070; PF07992; PF13738; PF02852;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Alanine dehydrogenase/PNT, C-terminal domain; FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id 3HCDH_N; AlaDh_PNT_C; FAD_binding_2; FAD_oxidored; GIDA; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF02737.18 evalue:4.1e-05 score:22.8 best_domain_score:17.9 name:3HCDH_N; db:Pfam-A.hmm|PF01262.21 evalue:8.1e-06 score:24.5 best_domain_score:12.4 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF00890.24 evalue:7.5e-06 score:24.5 best_domain_score:24.5 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:1e-07 score:30.9 best_domain_score:29.6 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:9.4e-10 score:37.3 best_domain_score:29.2 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:7.3e-10 score:37.3 best_domain_score:22.6 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:5.7e-06 score:25.7 best_domain_score:16.5 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:1.9e-19 score:69.3 best_domain_score:62.2 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.1e-69 score:234.1 best_domain_score:233.6 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:5.5e-09 score:34.9 best_domain_score:19.5 name:Pyr_redox_3; db:Pfam-A.hmm|PF02852.22 evalue:5.5e-37 score:125.6 best_domain_score:124.9 name:Pyr_redox_dim;
sprot_desc Dihydrolipoyl dehydrogenase;
sprot_id sp|P14218|DLDH_PSEFL;
sprot_target db:uniprot_sprot|sp|P14218|DLDH_PSEFL 4 475 evalue:2.2e-143 qcov:99.40 identity:55.70;
tigrfam_acc TIGR01350;
tigrfam_desc dihydrolipoyl dehydrogenase;
tigrfam_name lipoamide_DH;
tigrfam_target db:TIGRFAMs.hmm|TIGR01350 evalue:4.4e-158 score:525.9 best_domain_score:525.7 name:TIGR01350;
74532 75539 CDS
ID metaerg.pl|07938
allec_ids 1.6.5.-;
allgo_ids GO:0055114; GO:0005737; GO:0016491;
allko_ids K00001;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727017.1 2 332 evalue:2.4e-153 qcov:98.80 identity:78.50;
kegg_pathway_id 00350; 00120; 00071; 00010; 00624; 00641;
kegg_pathway_name Tyrosine metabolism; Bile acid biosynthesis; Fatty acid metabolism; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; 3-Chloroacrylic acid degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id PWY0-1352; PWY0-1336; PWY0-1347; PWY0-1348;
metacyc_pathway_name nitrate reduction VIII (dissimilatory);; NADH to fumarate electron transfer;; NADH to trimethylamine N-oxide electron transfer;; NADH to dimethyl sulfoxide electron transfer;;
metacyc_pathway_type ANAEROBIC-RESPIRATION; Electron-Transfer; Nitrate-Reduction;; ANAEROBIC-RESPIRATION; Electron-Transfer;; ANAEROBIC-RESPIRATION; Electron-Transfer;; ANAEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF08240; PF00107;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:1.3e-05 score:24.3 best_domain_score:22.3 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:2.8e-09 score:36.3 best_domain_score:35.5 name:ADH_zinc_N;
sprot_desc Putative quinone oxidoreductase YhfP;
sprot_id sp|O07615|YHFP_BACSU;
sprot_target db:uniprot_sprot|sp|O07615|YHFP_BACSU 7 331 evalue:4.2e-72 qcov:97.00 identity:42.90;
tigrfam_acc TIGR02823;
tigrfam_desc putative quinone oxidoreductase, YhdH/YhfP family;
tigrfam_mainrole Unknown function;
tigrfam_name oxido_YhdH;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR02823 evalue:8.7e-120 score:398.6 best_domain_score:398.4 name:TIGR02823;
75616 75981 CDS
ID metaerg.pl|07939
allgo_ids GO:0000160;
allko_ids K07645; K07708; K07677; K07704; K10909; K01937; K08282; K11231; K13490; K11711; K07642; K00760; K02484; K11356; K11640; K07778; K11354; K07768; K07711; K00873; K07679; K02478; K07648; K07651; K11623; K07718; K07654; K07682; K07777; K03407; K07637; K07641; K07646; K08475; K07639; K07673; K01120; K07652; K12767; K11383; K13761; K02486; K07769; K11617; K04757; K10125; K11357; K07647; K07675; K07717; K01769; K06379; K10681; K07676; K07709; K07644; K02482; K02480; K07653; K07636; K11527; K10715; K07678; K02668; K03388; K08479; K10916; K02489; K07716; K07710; K01768; K02658;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725502.1 1 121 evalue:5.0e-53 qcov:100.00 identity:87.60;
kegg_pathway_id 00240; 05111; 00230; 00983; 00010; 00710; 00790; 03090; 00620; 04011; 02020;
kegg_pathway_name Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Drug metabolism - other enzymes; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Folate biosynthesis; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:5.5e-28 score:96.6 best_domain_score:96.5 name:Response_reg;
sprot_desc hypothetical protein;
sprot_id sp|P43501|PILH_PSEAE;
sprot_target db:uniprot_sprot|sp|P43501|PILH_PSEAE 1 119 evalue:3.0e-36 qcov:98.30 identity:59.70;
75986 76507 CDS
ID metaerg.pl|07940
allec_ids 1.11.1.15;
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0009570; GO:0005737; GO:0008379; GO:0045454; GO:0034599; GO:0042744;
allko_ids K03386; K00540; K11187; K14171;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727016.1 3 160 evalue:9.6e-58 qcov:91.30 identity:70.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:1.1e-07 score:31.0 best_domain_score:30.8 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:2e-30 score:104.6 best_domain_score:104.5 name:Redoxin;
sprot_desc Peroxiredoxin-2E-1, chloroplastic;
sprot_id sp|Q69TY4|PR2E1_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q69TY4|PR2E1_ORYSJ 2 160 evalue:3.0e-34 qcov:91.90 identity:45.40;
76786 76550 CDS
ID metaerg.pl|07941
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38142.1 1 73 evalue:2.2e-22 qcov:93.60 identity:78.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF11137;
pfam_desc Protein of unknown function (DUF2909);
pfam_id DUF2909;
pfam_target db:Pfam-A.hmm|PF11137.8 evalue:1.9e-20 score:71.8 best_domain_score:71.6 name:DUF2909;
tm_num 2;
76786 76550 transmembrane_helix
ID metaerg.pl|07942
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology o76562-76627i76664-76732o;
76833 77558 CDS
ID metaerg.pl|07943
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725500.1 14 238 evalue:1.1e-75 qcov:93.40 identity:58.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF02104;
pfam_desc SURF1 family;
pfam_id SURF1;
pfam_target db:Pfam-A.hmm|PF02104.15 evalue:9e-27 score:93.7 best_domain_score:93.4 name:SURF1;
sp YES;
tm_num 2;
76833 76907 lipoprotein_signal_peptide
ID metaerg.pl|07944
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
76833 77558 transmembrane_helix
ID metaerg.pl|07945
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology i76869-76928o77478-77546i;
77555 78124 CDS
ID metaerg.pl|07946
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725499.1 1 189 evalue:3.5e-61 qcov:100.00 identity:57.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF02630;
pfam_desc SCO1/SenC;
pfam_id SCO1-SenC;
pfam_target db:Pfam-A.hmm|PF02630.14 evalue:3e-06 score:26.4 best_domain_score:26.0 name:SCO1-SenC;
tm_num 1;
77555 78124 transmembrane_helix
ID metaerg.pl|07947
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology i77573-77641o;
78179 79060 CDS
ID metaerg.pl|07948
allec_ids 2.5.1.141; 2.5.1.-;
allgo_ids GO:0016021; GO:0016765; GO:0005886; GO:0008495; GO:0048034;
allko_ids K02301; K02257;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725497.1 1 290 evalue:2.6e-124 qcov:99.00 identity:82.10;
kegg_pathway_id 00860; 00190;
kegg_pathway_name Porphyrin and chlorophyll metabolism; Oxidative phosphorylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metabolic_acc TIGR01473;
metabolic_process compound:Oxygen;process:Cytochrome (quinone) oxidase, bo type;gene:CyoE;;
metabolic_target db:metabolic.hmm|TIGR01473 evalue:2.4e-95 score:318.7 best_domain_score:318.5 name:TIGR01473;
metacyc_pathway_id PWY-6129; PWY-5864; PWY-5133; PWY-5893; PWY-5027; PWY-6383; PWY-6520; PWY-5134; PWY-5899; PWY-5064; PWY-4502; PWY-5838; PWY-6403; PWY-5817; PWY-2681; PWY-5068; PWY-5862; PWY-5845; PWY-5896; PWY-5863; PWY-5816; PWY-5898; PWY-6404; PWY-5806; PWY-5135; PWY-5140; PWY-5701; POLYISOPRENSYN-PWY; PWY-5783; PWY-5805; PWY-6262; PWY-5861; PWY-724; PWY-6263; PWY-5808; PWY-5897; PWY-5132;
metacyc_pathway_name dolichol and dolichyl phosphate biosynthesis;; superpathway of plastoquinol biosynthesis;; colupulone and cohumulone biosynthesis;; tridecaprenyl diphosphate biosynthesis;; phylloquinol biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; nonaprenyl diphosphate biosynthesis II;; superpathway of bitter acids biosynthesis;; superpathway of menaquinol-13 biosynthesis;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; carrageenan biosynthesis;; dodecaprenyl diphosphate biosynthesis;; trans-zeatin biosynthesis;; chlorophyll cycle;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of phylloquinol biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of menaquinol-12 biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; xanthohumol biosynthesis;; cannabinoid biosynthesis;; shikonin biosynthesis;; polyisoprenoid biosynthesis (E. coli);; octaprenyl diphosphate biosynthesis;; nonaprenyl diphosphate biosynthesis I;; demethylmenaquinol-8 biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of menaquinol-8 biosynthesis II;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; lupulone and humulone biosynthesis;;
metacyc_pathway_type Lipid-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Polysaccharides-Biosynthesis;; Polyprenyl-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; Chlorophyll-a-Biosynthesis;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; PRENYLFLAVONOID-SYN;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Demethylmenaquinol-8-Biosynthesis;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;;
pfam_acc PF01040;
pfam_desc UbiA prenyltransferase family;
pfam_id UbiA;
pfam_target db:Pfam-A.hmm|PF01040.18 evalue:1.5e-60 score:203.8 best_domain_score:203.5 name:UbiA;
sprot_desc Protoheme IX farnesyltransferase;
sprot_id sp|Q60CP3|CYOE_METCA;
sprot_target db:uniprot_sprot|sp|Q60CP3|CYOE_METCA 11 292 evalue:2.4e-87 qcov:96.20 identity:61.00;
tigrfam_acc TIGR01473;
tigrfam_desc protoheme IX farnesyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cyoE_ctaB;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01473 evalue:2.4e-95 score:318.7 best_domain_score:318.5 name:TIGR01473;
tm_num 9;
78179 79060 transmembrane_helix
ID metaerg.pl|07949
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology i78212-78280o78308-78376i78452-78511o78521-78580i78599-78658o78668-78736i78821-78874o78887-78946i78983-79051o;
79081 81990 CDS
ID metaerg.pl|07950
allec_ids 1.4.4.2;
allgo_ids GO:0006520; GO:0016829; GO:0004375; GO:0019464;
allko_ids K00283; K00281; K00282;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725496.1 1 969 evalue:0.0e+00 qcov:100.00 identity:81.40;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
metacyc_pathway_id GLYCLEAV-PWY;
metacyc_pathway_name glycine cleavage;;
metacyc_pathway_type GLYCINE-DEG;;
pfam_acc PF01212; PF02347;
pfam_desc Beta-eliminating lyase; Glycine cleavage system P-protein;
pfam_id Beta_elim_lyase; GDC-P;
pfam_target db:Pfam-A.hmm|PF01212.21 evalue:5.2e-06 score:25.2 best_domain_score:24.2 name:Beta_elim_lyase; db:Pfam-A.hmm|PF02347.16 evalue:1.6e-179 score:596.5 best_domain_score:566.8 name:GDC-P;
sprot_desc Glycine dehydrogenase (decarboxylating);
sprot_id sp|B5EUH1|GCSP_ALIFM;
sprot_target db:uniprot_sprot|sp|B5EUH1|GCSP_ALIFM 11 967 evalue:0.0e+00 qcov:98.80 identity:59.80;
tigrfam_acc TIGR00461;
tigrfam_desc glycine dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name gcvP;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00461 evalue:0 score:1408.4 best_domain_score:1408.2 name:TIGR00461;
82220 87889 CDS
ID metaerg.pl|07951
allgo_ids GO:0004252; GO:0006508;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00082;
pfam_desc Subtilase family;
pfam_id Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:5.6e-26 score:90.7 best_domain_score:90.1 name:Peptidase_S8;
sp YES;
82220 82315 signal_peptide
ID metaerg.pl|07952
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
88019 90484 CDS
ID metaerg.pl|07953
allgo_ids GO:0004181; GO:0006508; GO:0008270;
allko_ids K04042;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725493.1 14 818 evalue:9.6e-249 qcov:98.10 identity:54.40;
kegg_pathway_id 00530;
kegg_pathway_name Aminosugars metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
pfam_acc PF00246;
pfam_desc Zinc carboxypeptidase;
pfam_id Peptidase_M14;
pfam_target db:Pfam-A.hmm|PF00246.24 evalue:1.2e-42 score:146.0 best_domain_score:145.4 name:Peptidase_M14;
sp YES;
tm_num 1;
88019 88108 signal_peptide
ID metaerg.pl|07954
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
88019 90484 transmembrane_helix
ID metaerg.pl|07955
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 54.7305; 0.0384034; 0.0740945; 54.9694; 0.126402;
topology i88037-88105o;
>Feature NODE_53_length_90425_cov_14.666
1450 2 CDS
ID metaerg.pl|07956
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Chrysiogenetota;c__Chrysiogenetes;o__Chrysiogenales;f__Chrysiogenaceae;g__Chrysiogenes;s__Chrysiogenes arsenatis;
genomedb_acc GCF_000469585.1;
genomedb_target db:genomedb|GCF_000469585.1|WP_051321273.1 53 482 evalue:1.2e-84 qcov:89.00 identity:43.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00082;
pfam_desc Subtilase family;
pfam_id Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:2.6e-33 score:114.8 best_domain_score:114.1 name:Peptidase_S8;
sp YES;
2 112 signal_peptide
ID metaerg.pl|07957
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
4083 1864 CDS
ID metaerg.pl|07958
allgo_ids GO:0004252; GO:0006508;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00082;
pfam_desc Subtilase family;
pfam_id Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:1.4e-33 score:115.7 best_domain_score:115.1 name:Peptidase_S8;
sp YES;
1864 1971 signal_peptide
ID metaerg.pl|07959
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
5444 4227 CDS
ID metaerg.pl|07960
allgo_ids GO:0016021; GO:0005886; GO:0015627; GO:0015628;
allko_ids K02455;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068303490.1 1 405 evalue:1.6e-119 qcov:100.00 identity:62.00;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00482;
pfam_desc Type II secretion system (T2SS), protein F;
pfam_id T2SSF;
pfam_target db:Pfam-A.hmm|PF00482.23 evalue:1.2e-37 score:127.9 best_domain_score:70.6 name:T2SSF;
sprot_desc Type II secretion system protein F;
sprot_id sp|Q00513|GSPF_PSEAE;
sprot_target db:uniprot_sprot|sp|Q00513|GSPF_PSEAE 1 404 evalue:2.3e-32 qcov:99.80 identity:32.20;
tm_num 3;
5444 4227 transmembrane_helix
ID metaerg.pl|07961
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i4734-4802o4884-4952i5349-5417o;
6970 5441 CDS
ID metaerg.pl|07962
allgo_ids GO:0005737; GO:0015627; GO:0005524; GO:0015628;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07397.1 22 506 evalue:1.7e-163 qcov:95.30 identity:64.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00437;
pfam_desc Type II/IV secretion system protein;
pfam_id T2SSE;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:1.9e-75 score:252.6 best_domain_score:252.1 name:T2SSE;
sprot_desc Type II secretion system protein E;
sprot_id sp|P31703|GSPE_PECCC;
sprot_target db:uniprot_sprot|sp|P31703|GSPE_PECCC 22 504 evalue:4.2e-108 qcov:94.90 identity:44.80;
8888 6957 CDS
ID metaerg.pl|07963
allgo_ids GO:0009306; GO:0009279; GO:0016021; GO:0015627; GO:0042802; GO:0015628;
allko_ids K02453;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07396.1 9 637 evalue:4.3e-204 qcov:97.80 identity:61.80;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00263; PF03958;
pfam_desc Bacterial type II and III secretion system protein; Bacterial type II/III secretion system short domain;
pfam_id Secretin; Secretin_N;
pfam_target db:Pfam-A.hmm|PF00263.21 evalue:4.4e-46 score:155.9 best_domain_score:155.2 name:Secretin; db:Pfam-A.hmm|PF03958.17 evalue:1.5e-28 score:98.2 best_domain_score:46.7 name:Secretin_N;
sp YES;
sprot_desc Secretin XcpQ;
sprot_id sp|P35818|GSPD_PSEAE;
sprot_target db:uniprot_sprot|sp|P35818|GSPD_PSEAE 17 614 evalue:4.0e-79 qcov:93.00 identity:34.50;
tigrfam_acc TIGR02517;
tigrfam_desc type II secretion system protein D;
tigrfam_mainrole Protein fate;
tigrfam_name type_II_gspD;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02517 evalue:2e-126 score:422.0 best_domain_score:414.2 name:TIGR02517;
6957 7037 signal_peptide
ID metaerg.pl|07964
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
9743 8937 CDS
ID metaerg.pl|07965
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
sp YES;
tm_num 1;
8937 9032 signal_peptide
ID metaerg.pl|07966
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
9743 8937 transmembrane_helix
ID metaerg.pl|07967
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i8949-9017o;
10120 10677 CDS
ID metaerg.pl|07968
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07394.1 26 185 evalue:2.5e-35 qcov:86.50 identity:58.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
sp YES;
10120 10215 lipoprotein_signal_peptide
ID metaerg.pl|07969
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
10717 12231 CDS
ID metaerg.pl|07970
allec_ids 6.2.1.n3;
allgo_ids GO:0003824; GO:0005829; GO:0016020; GO:0005739; GO:0005634; GO:0090409; GO:0006633; GO:0090410;
allko_ids K05939; K01913; K01586; K01779; K00992; K02364; K01912; K00143; K03367; K01776; K01652; K00666; K01897; K01909; K01904; K01895; K01784; K18660;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796595.1 1 504 evalue:8.6e-208 qcov:100.00 identity:72.00;
kegg_pathway_id 00930; 01053; 00770; 00564; 00281; 00010; 00310; 00290; 00471; 00660; 00061; 00052; 00360; 00071; 00473; 00251; 00252; 00940; 00632; 00520; 00720; 00650; 00640; 00300; 00960; 00903; 00620;
kegg_pathway_name Caprolactam degradation; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Glycerophospholipid metabolism; Geraniol degradation; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine biosynthesis; D-Glutamine and D-glutamate metabolism; C5-Branched dibasic acid metabolism; Fatty acid biosynthesis; Galactose metabolism; Phenylalanine metabolism; Fatty acid metabolism; D-Alanine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Phenylpropanoid biosynthesis; Benzoate degradation via CoA ligation; Nucleotide sugars metabolism; Reductive carboxylate cycle (CO2 fixation); Butanoate metabolism; Propanoate metabolism; Lysine biosynthesis; Alkaloid biosynthesis II; Limonene and pinene degradation; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:7.6e-97 score:323.8 best_domain_score:323.5 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:3.3e-13 score:49.7 best_domain_score:48.7 name:AMP-binding_C;
sprot_desc Malonate--CoA ligase;
sprot_id sp|Q8H151|AAE13_ARATH;
sprot_target db:uniprot_sprot|sp|Q8H151|AAE13_ARATH 49 493 evalue:7.7e-70 qcov:88.30 identity:36.20;
16921 12239 CDS
ID metaerg.pl|07971
allgo_ids GO:0000155; GO:0007165;
allko_ids K10909; K07704; K08282; K01937; K07708; K07677; K07645; K13490; K02491; K01090; K11231; K07643; K07642; K11711; K11356; K11640; K04486; K02484; K08884; K07711; K00873; K11328; K13533; K11354; K07683; K07778; K11633; K02575; K07768; K11623; K07651; K07698; K07718; K02478; K07679; K07648; K03407; K07637; K07654; K07777; K07649; K07682; K00936; K07652; K07646; K13598; K07641; K04093; K07673; K01120; K08475; K07639; K04757; K11617; K02476; K11357; K02342; K11629; K10125; K11383; K13761; K02486; K12767; K07769; K11520; K14509; K11637; K07717; K07675; K07680; K07647; K10942; K13040; K07650; K10681; K07676; K06379; K04518; K01769; K07644; K13532; K07709; K07638; K07653; K07636; K14489; K02482; K08801; K02480; K07678; K10715; K13587; K11527; K02030; K07701; K07674; K08479; K10916; K02668; K03388; K07640; K07710; K01768; K07656; K02489; K07697; K07716; K11614;
kegg_pathway_id 03090; 00620; 04011; 02020; 00340; 00790; 00010; 00710; 00240; 03030; 05111; 00400; 00230;
kegg_pathway_name Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Histidine metabolism; Folate biosynthesis; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Pyrimidine metabolism; DNA replication; Vibrio cholerae pathogenic cycle; Phenylalanine, tyrosine and tryptophan biosynthesis; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF02518; PF00512; PF00989; PF08447; PF08448; PF12860; PF13188; PF13426; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_7; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1e-27 score:96.1 best_domain_score:95.0 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:6.9e-20 score:70.1 best_domain_score:68.7 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:7.2e-43 score:144.4 best_domain_score:36.8 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:1.1e-34 score:117.8 best_domain_score:25.6 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:1.1e-55 score:185.8 best_domain_score:50.7 name:PAS_4; db:Pfam-A.hmm|PF12860.7 evalue:3.8e-42 score:142.3 best_domain_score:65.9 name:PAS_7; db:Pfam-A.hmm|PF13188.7 evalue:1.1e-26 score:91.5 best_domain_score:24.1 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:8.6e-55 score:182.6 best_domain_score:47.8 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:2.5e-22 score:78.4 best_domain_score:77.0 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:6.6e-72 score:238.7 best_domain_score:59.5 name:TIGR00229;
17322 17077 CDS
ID metaerg.pl|07972
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468880.1 1 65 evalue:8.9e-14 qcov:80.20 identity:58.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
17896 17600 CDS
ID metaerg.pl|07973
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468881.1 1 98 evalue:1.8e-32 qcov:100.00 identity:76.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF04977;
pfam_desc Septum formation initiator;
pfam_id DivIC;
pfam_target db:Pfam-A.hmm|PF04977.15 evalue:2.9e-12 score:45.4 best_domain_score:45.1 name:DivIC;
tm_num 1;
17896 17600 transmembrane_helix
ID metaerg.pl|07974
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i17618-17686o;
18223 18008 CDS
ID metaerg.pl|07975
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246610.1 1 70 evalue:2.2e-16 qcov:98.60 identity:70.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
tm_num 2;
18223 18008 transmembrane_helix
ID metaerg.pl|07976
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology o18020-18088i18146-18214o;
19422 18229 CDS
ID metaerg.pl|07977
allec_ids 2.7.2.3;
allgo_ids GO:0004618; GO:0006096; GO:0005737; GO:0005524;
allko_ids K00927;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468883.1 1 396 evalue:3.0e-179 qcov:99.70 identity:82.10;
kegg_pathway_id 00010; 00710;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id P185-PWY; P124-PWY; GLUCONEO-PWY; PHOTOALL-PWY; GLYCOLYSIS; P122-PWY; GLYCOLYSIS-E-D; PWY-5464; ANAGLYCOLYSIS-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; P441-PWY; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; CALVIN-PWY; PWY-5484; P461-PWY;
metacyc_pathway_name formaldehyde assimilation III (dihydroxyacetone cycle);; Bifidobacterium shunt;; gluconeogenesis I;; oxygenic photosynthesis;; glycolysis I (from glucose 6-phosphate);; heterolactic fermentation;; superpathway of glycolysis and the Entner-Doudoroff pathway;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; superpathway of N-acetylneuraminate degradation;; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; Calvin-Benson-Bassham cycle;; glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;;
metacyc_pathway_type Formaldehyde-Assimilation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Gluconeogenesis;; Photosynthesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;;
pfam_acc PF00162;
pfam_desc Phosphoglycerate kinase;
pfam_id PGK;
pfam_target db:Pfam-A.hmm|PF00162.19 evalue:8.3e-142 score:471.8 best_domain_score:471.7 name:PGK;
sprot_desc Phosphoglycerate kinase;
sprot_id sp|A3PIU6|PGK_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PIU6|PGK_RHOS1 1 394 evalue:1.1e-156 qcov:99.20 identity:73.20;
19567 20073 CDS
ID metaerg.pl|07978
allec_ids 5.2.1.8;
allgo_ids GO:0000413; GO:0003755; GO:0042597; GO:0006457;
allko_ids K01802;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246608.1 1 168 evalue:4.0e-85 qcov:100.00 identity:92.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00160;
pfam_desc Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;
pfam_id Pro_isomerase;
pfam_target db:Pfam-A.hmm|PF00160.21 evalue:3.6e-44 score:150.0 best_domain_score:149.8 name:Pro_isomerase;
sprot_desc Probable peptidyl-prolyl cis-trans isomerase;
sprot_id sp|Q8YHB5|PPI1_BRUME;
sprot_target db:uniprot_sprot|sp|Q8YHB5|PPI1_BRUME 2 167 evalue:1.2e-46 qcov:98.80 identity:55.00;
20066 20680 CDS
ID metaerg.pl|07979
allec_ids 5.2.1.8;
allgo_ids GO:0000413; GO:0003755; GO:0042597; GO:0006457;
allko_ids K01802;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657522.1 1 202 evalue:9.8e-86 qcov:99.00 identity:78.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00160;
pfam_desc Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;
pfam_id Pro_isomerase;
pfam_target db:Pfam-A.hmm|PF00160.21 evalue:3.1e-42 score:143.8 best_domain_score:143.5 name:Pro_isomerase;
sp YES;
sprot_desc Probable peptidyl-prolyl cis-trans isomerase;
sprot_id sp|Q8YHB5|PPI1_BRUME;
sprot_target db:uniprot_sprot|sp|Q8YHB5|PPI1_BRUME 1 202 evalue:6.1e-42 qcov:99.00 identity:47.10;
tm_num 1;
20066 20149 signal_peptide
ID metaerg.pl|07980
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
20066 20680 transmembrane_helix
ID metaerg.pl|07981
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i20078-20134o;
21138 20734 CDS
ID metaerg.pl|07982
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480811.1 1 133 evalue:9.8e-34 qcov:99.30 identity:69.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF13767;
pfam_desc Domain of unknown function (DUF4168);
pfam_id DUF4168;
pfam_target db:Pfam-A.hmm|PF13767.6 evalue:1.2e-10 score:41.7 best_domain_score:41.1 name:DUF4168;
sp YES;
20734 20817 signal_peptide
ID metaerg.pl|07983
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
22476 21292 CDS
ID metaerg.pl|07984
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796325.1 1 394 evalue:1.9e-202 qcov:100.00 identity:84.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF05762;
pfam_desc VWA domain containing CoxE-like protein;
pfam_id VWA_CoxE;
pfam_target db:Pfam-A.hmm|PF05762.14 evalue:8.1e-09 score:34.4 best_domain_score:33.6 name:VWA_CoxE;
24025 22661 CDS
ID metaerg.pl|07985
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796326.1 3 453 evalue:1.6e-165 qcov:99.30 identity:69.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF11150;
pfam_desc Protein of unknown function (DUF2927);
pfam_id DUF2927;
pfam_target db:Pfam-A.hmm|PF11150.8 evalue:1.8e-36 score:125.4 best_domain_score:124.8 name:DUF2927;
sp YES;
22661 22705 lipoprotein_signal_peptide
ID metaerg.pl|07986
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
24468 24022 CDS
ID metaerg.pl|07987
allec_ids 2.3.1.36;
allgo_ids GO:0005737; GO:0005634; GO:0047812; GO:0004402; GO:0008080; GO:0070458; GO:0046416; GO:0006473;
allko_ids K18852;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796327.1 1 147 evalue:6.7e-60 qcov:99.30 identity:70.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00583; PF13673; PF13508;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:2.3e-14 score:52.9 best_domain_score:52.6 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:4.9e-06 score:25.8 best_domain_score:25.5 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:3e-08 score:33.2 best_domain_score:32.8 name:Acetyltransf_7;
sprot_desc D-amino-acid N-acetyltransferase HPA3;
sprot_id sp|P39979|HPA3_YEAST;
sprot_target db:uniprot_sprot|sp|P39979|HPA3_YEAST 3 146 evalue:5.1e-22 qcov:97.30 identity:37.00;
25323 24481 CDS
ID metaerg.pl|07988
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796328.1 1 280 evalue:3.5e-142 qcov:100.00 identity:90.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00004; PF07724; PF07728; PF00158;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); AAA domain (dynein-related subfamily); Sigma-54 interaction domain;
pfam_id AAA; AAA_2; AAA_5; Sigma54_activat;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:4.5e-14 score:52.2 best_domain_score:51.6 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:5.3e-06 score:25.9 best_domain_score:25.2 name:AAA_2; db:Pfam-A.hmm|PF07728.14 evalue:2.5e-13 score:49.4 best_domain_score:48.7 name:AAA_5; db:Pfam-A.hmm|PF00158.26 evalue:1.9e-06 score:26.9 best_domain_score:13.0 name:Sigma54_activat;
25500 25970 CDS
ID metaerg.pl|07989
allgo_ids GO:0008270; GO:0005737; GO:0010468;
allko_ids K06204;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796403.1 17 156 evalue:1.4e-68 qcov:89.70 identity:95.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF01258;
pfam_desc Prokaryotic dksA/traR C4-type zinc finger;
pfam_id zf-dskA_traR;
pfam_target db:Pfam-A.hmm|PF01258.17 evalue:1e-07 score:31.0 best_domain_score:30.2 name:zf-dskA_traR;
sprot_desc RNA polymerase-binding transcription factor DksA;
sprot_id sp|P0CAU3|DKSA_CAUVC;
sprot_target db:uniprot_sprot|sp|P0CAU3|DKSA_CAUVC 26 156 evalue:2.2e-47 qcov:84.00 identity:70.20;
tigrfam_acc TIGR02420;
tigrfam_desc RNA polymerase-binding protein DksA;
tigrfam_mainrole Regulatory functions;
tigrfam_name dksA;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02420 evalue:1.2e-41 score:140.8 best_domain_score:140.4 name:TIGR02420;
26052 27218 CDS
ID metaerg.pl|07990
allec_ids 1.14.13.24;
allgo_ids GO:0071949; GO:0018669; GO:0019439;
allko_ids K00480; K22270;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468891.1 1 386 evalue:1.6e-148 qcov:99.50 identity:71.50;
kegg_pathway_id 00626; 00624;
kegg_pathway_name Naphthalene and anthracene degradation; 1- and 2-Methylnaphthalene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id M-CRESOL-DEGRADATION-PWY; PWY-6228;
metacyc_pathway_name m-cresol degradation;; 3-chlorobenzoate degradation III (via gentisate);;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;; 3-Chlorobenzoate-Degradation;;
pfam_acc PF00890; PF01494; PF13450;
pfam_desc FAD binding domain; FAD binding domain; NAD(P)-binding Rossmann-like domain;
pfam_id FAD_binding_2; FAD_binding_3; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:8e-06 score:24.4 best_domain_score:24.3 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:5.8e-26 score:90.8 best_domain_score:90.1 name:FAD_binding_3; db:Pfam-A.hmm|PF13450.6 evalue:2.3e-07 score:30.2 best_domain_score:28.0 name:NAD_binding_8;
sprot_desc 3-hydroxybenzoate 6-hydroxylase;
sprot_id sp|Q3S4B7|3HBH_POLNA;
sprot_target db:uniprot_sprot|sp|Q3S4B7|3HBH_POLNA 6 349 evalue:1.9e-31 qcov:88.70 identity:32.10;
27278 27862 CDS
ID metaerg.pl|07991
allec_ids 3.4.23.-;
allgo_ids GO:0016021; GO:0005886; GO:0004190;
allko_ids K06985;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480804.1 1 194 evalue:1.1e-86 qcov:100.00 identity:83.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF13650; PF13975;
pfam_desc Aspartyl protease; gag-polyprotein putative aspartyl protease;
pfam_id Asp_protease_2; gag-asp_proteas;
pfam_target db:Pfam-A.hmm|PF13650.6 evalue:7.1e-15 score:54.7 best_domain_score:54.2 name:Asp_protease_2; db:Pfam-A.hmm|PF13975.6 evalue:1.1e-18 score:66.8 best_domain_score:66.3 name:gag-asp_proteas;
sprot_desc hypothetical protein;
sprot_id sp|Q9ZC99|Y867_RICPR;
sprot_target db:uniprot_sprot|sp|Q9ZC99|Y867_RICPR 37 192 evalue:1.3e-17 qcov:80.40 identity:33.70;
tigrfam_acc TIGR02281;
tigrfam_desc clan AA aspartic protease, TIGR02281 family;
tigrfam_mainrole Protein fate;
tigrfam_name clan_AA_DTGA;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02281 evalue:1.2e-29 score:102.1 best_domain_score:101.8 name:TIGR02281;
tm_num 2;
27278 27862 transmembrane_helix
ID metaerg.pl|07992
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology o27293-27352i27389-27442o;
28063 29289 CDS
ID metaerg.pl|07993
allec_ids 4.2.1.20;
allgo_ids GO:0004834;
allko_ids K01695; K01696; K01754; K01694; K06001; K01817;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480803.1 1 408 evalue:1.5e-231 qcov:100.00 identity:94.10;
kegg_pathway_id 00260; 00400; 00290; 02020;
kegg_pathway_name Glycine, serine and threonine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Valine, leucine and isoleucine biosynthesis; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; TRPSYN-PWY;
metacyc_pathway_name superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; L-tryptophan biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; TRYPTOPHAN-BIOSYNTHESIS;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:1.9e-42 score:144.9 best_domain_score:144.6 name:PALP;
sprot_desc Tryptophan synthase beta chain;
sprot_id sp|A1B8L3|TRPB_PARDP;
sprot_target db:uniprot_sprot|sp|A1B8L3|TRPB_PARDP 1 406 evalue:2.9e-216 qcov:99.50 identity:86.50;
tigrfam_acc TIGR00263;
tigrfam_desc tryptophan synthase, beta subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpB;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00263 evalue:8.2e-195 score:646.4 best_domain_score:646.3 name:TIGR00263;
29608 29952 CDS
ID metaerg.pl|07994
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796332.1 1 107 evalue:7.3e-22 qcov:93.90 identity:56.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
sp YES;
tm_num 1;
29608 29673 signal_peptide
ID metaerg.pl|07995
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
29608 29952 transmembrane_helix
ID metaerg.pl|07996
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology o29617-29670i;
30019 30558 CDS
ID metaerg.pl|07997
allgo_ids GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796333.1 1 171 evalue:4.5e-58 qcov:95.50 identity:67.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00196;
pfam_desc Bacterial regulatory proteins, luxR family;
pfam_id GerE;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:1.7e-07 score:29.9 best_domain_score:29.3 name:GerE;
tm_num 2;
30019 30558 transmembrane_helix
ID metaerg.pl|07998
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i30031-30099o30142-30210i;
30965 30582 CDS
ID metaerg.pl|07999
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicyclus;s__Roseicyclus mahoneyensis;
genomedb_acc GCF_003148775.1;
genomedb_target db:genomedb|GCF_003148775.1|WP_109670509.1 1 124 evalue:8.4e-51 qcov:97.60 identity:77.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF09996;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2237);
pfam_id DUF2237;
pfam_target db:Pfam-A.hmm|PF09996.9 evalue:9e-52 score:173.2 best_domain_score:173.0 name:DUF2237;
32108 31074 CDS
ID metaerg.pl|08000
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480800.1 1 343 evalue:2.0e-131 qcov:99.70 identity:67.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF10094;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2332);
pfam_id DUF2332;
pfam_target db:Pfam-A.hmm|PF10094.9 evalue:4.1e-93 score:311.7 best_domain_score:311.5 name:DUF2332;
32803 32105 CDS
ID metaerg.pl|08001
allec_ids 3.1.1.29;
allgo_ids GO:0004045; GO:0005737; GO:0006412;
allko_ids K01056;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__UBA3069;s__UBA3069 sp002366795;
genomedb_acc GCA_002366795.1;
genomedb_target db:genomedb|GCA_002366795.1|DFBX01000125.1_59 1 232 evalue:3.6e-92 qcov:100.00 identity:72.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF01195;
pfam_desc Peptidyl-tRNA hydrolase;
pfam_id Pept_tRNA_hydro;
pfam_target db:Pfam-A.hmm|PF01195.19 evalue:8.2e-52 score:174.8 best_domain_score:174.6 name:Pept_tRNA_hydro;
sprot_desc Peptidyl-tRNA hydrolase;
sprot_id sp|Q1GK69|PTH_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GK69|PTH_RUEST 1 186 evalue:3.6e-83 qcov:80.20 identity:77.40;
tigrfam_acc TIGR00447;
tigrfam_desc aminoacyl-tRNA hydrolase;
tigrfam_mainrole Protein synthesis;
tigrfam_name pth;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00447 evalue:8.1e-50 score:168.3 best_domain_score:168.0 name:TIGR00447;
32919 33254 CDS
ID metaerg.pl|08002
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246596.1 1 108 evalue:2.1e-45 qcov:97.30 identity:80.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF03992;
pfam_desc Antibiotic biosynthesis monooxygenase;
pfam_id ABM;
pfam_target db:Pfam-A.hmm|PF03992.16 evalue:4.8e-20 score:70.7 best_domain_score:70.4 name:ABM;
33944 33315 CDS
ID metaerg.pl|08003
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0008097;
allko_ids K02897;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796338.1 1 209 evalue:1.7e-93 qcov:100.00 identity:83.70;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF01386; PF14693;
pfam_desc Ribosomal L25p family; Ribosomal protein TL5, C-terminal domain;
pfam_id Ribosomal_L25p; Ribosomal_TL5_C;
pfam_target db:Pfam-A.hmm|PF01386.19 evalue:1.7e-20 score:72.5 best_domain_score:71.7 name:Ribosomal_L25p; db:Pfam-A.hmm|PF14693.6 evalue:4.1e-23 score:80.8 best_domain_score:80.1 name:Ribosomal_TL5_C;
sprot_desc 50S ribosomal protein L25;
sprot_id sp|Q1GK67|RL25_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GK67|RL25_RUEST 1 208 evalue:8.4e-79 qcov:99.50 identity:72.70;
tigrfam_acc TIGR00731;
tigrfam_desc ribosomal protein bL25, Ctc-form;
tigrfam_mainrole Protein synthesis;
tigrfam_name bL25_bact_ctc;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00731 evalue:5.1e-37 score:126.4 best_domain_score:126.3 name:TIGR00731;
35473 34124 CDS
ID metaerg.pl|08004
allec_ids 6.3.4.14;
allgo_ids GO:0005524; GO:0046872; GO:0003989; GO:0004075; GO:0006633; GO:2001295;
allko_ids K01966; K01965; K01571; K11541; K01959; K01955; K01457; K01941; K01964; K14541; K03416; K01956; K01954; K01958; K00609; K01960; K01968; K08289; K11540; K01961;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482049.1 1 445 evalue:4.5e-232 qcov:99.10 identity:89.40;
kegg_pathway_id 00670; 00230; 00240; 00020; 00280; 00640; 00061; 00253; 00791; 00220; 00252; 00251; 00330; 00620;
kegg_pathway_name One carbon pool by folate; Purine metabolism; Pyrimidine metabolism; Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation; Propanoate metabolism; Fatty acid biosynthesis; Tetracycline biosynthesis; Atrazine degradation; Urea cycle and metabolism of amino groups; Alanine and aspartate metabolism; Glutamate metabolism; Arginine and proline metabolism; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id PWY0-1264;
metacyc_pathway_name biotin-carboxyl carrier protein assembly;;
metacyc_pathway_type Lipid-Biosynthesis;;
pfam_acc PF02222; PF02655; PF02785; PF00289; PF02786; PF07478;
pfam_desc ATP-grasp domain; ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus;
pfam_id ATP-grasp; ATP-grasp_3; Biotin_carb_C; Biotin_carb_N; CPSase_L_D2; Dala_Dala_lig_C;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:9.6e-10 score:37.5 best_domain_score:36.3 name:ATP-grasp; db:Pfam-A.hmm|PF02655.14 evalue:3.7e-06 score:26.3 best_domain_score:24.2 name:ATP-grasp_3; db:Pfam-A.hmm|PF02785.19 evalue:2.7e-33 score:113.5 best_domain_score:112.6 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:2.7e-46 score:155.9 best_domain_score:154.9 name:Biotin_carb_N; db:Pfam-A.hmm|PF02786.17 evalue:8.4e-79 score:263.2 best_domain_score:262.6 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:1.5e-11 score:43.5 best_domain_score:42.2 name:Dala_Dala_lig_C;
sprot_desc Biotin carboxylase;
sprot_id sp|P43873|ACCC_HAEIN;
sprot_target db:uniprot_sprot|sp|P43873|ACCC_HAEIN 1 443 evalue:2.4e-160 qcov:98.70 identity:61.90;
tigrfam_acc TIGR00514;
tigrfam_desc acetyl-CoA carboxylase, biotin carboxylase subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accC;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00514 evalue:3.5e-216 score:717.5 best_domain_score:717.2 name:TIGR00514;
35978 35484 CDS
ID metaerg.pl|08005
allko_ids K01965; K00658; K01958;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797945.1 1 164 evalue:3.1e-58 qcov:100.00 identity:77.60;
kegg_pathway_id 00020; 00640; 00310; 00280;
kegg_pathway_name Citrate cycle (TCA cycle); Propanoate metabolism; Lysine degradation; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00364;
pfam_desc Biotin-requiring enzyme;
pfam_id Biotin_lipoyl;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:9.7e-21 score:72.6 best_domain_score:72.2 name:Biotin_lipoyl;
tigrfam_acc TIGR00531;
tigrfam_desc acetyl-CoA carboxylase, biotin carboxyl carrier protein;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name BCCP;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00531 evalue:1.4e-34 score:119.0 best_domain_score:118.8 name:TIGR00531;
36157 37488 CDS
ID metaerg.pl|08006
allgo_ids GO:0043565;
allko_ids K02484; K14260; K00517; K00558; K00891; K01486; K00012; K07636; K10907;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470697.1 5 440 evalue:9.1e-161 qcov:98.40 identity:69.00;
kegg_pathway_id 02020; 00903; 00040; 00271; 00520; 00626; 00361; 00230; 00940; 00400; 00500;
kegg_pathway_name Two-component system - General; Limonene and pinene degradation; Pentose and glucuronate interconversions; Methionine metabolism; Nucleotide sugars metabolism; Naphthalene and anthracene degradation; gamma-Hexachlorocyclohexane degradation; Purine metabolism; Phenylpropanoid biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Starch and sucrose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF09856; PF12844; PF01381; PF13560;
pfam_desc Predicted transcriptional regulator (DUF2083); Helix-turn-helix domain; Helix-turn-helix; Helix-turn-helix domain;
pfam_id DUF2083; HTH_19; HTH_3; HTH_31;
pfam_target db:Pfam-A.hmm|PF09856.9 evalue:7.7e-12 score:44.6 best_domain_score:23.8 name:DUF2083; db:Pfam-A.hmm|PF12844.7 evalue:1.4e-11 score:43.5 best_domain_score:42.6 name:HTH_19; db:Pfam-A.hmm|PF01381.22 evalue:7e-14 score:50.9 best_domain_score:48.3 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:1.5e-13 score:50.1 best_domain_score:50.1 name:HTH_31;
37659 38027 CDS
ID metaerg.pl|08007
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0009405; GO:0006355;
allko_ids K06379; K07676; K10681; K07644; K07709; K10125; K11357; K04757; K07769; K12767; K13761; K02486; K11383; K07675; K07717; K07647; K10916; K08479; K03388; K02668; K01768; K07710; K07716; K02489; K07636; K07653; K07638; K02480; K02482; K10715; K07678; K11527; K02030; K07642; K11711; K11640; K11356; K02484; K00760; K01937; K08282; K07704; K07708; K07645; K07677; K11231; K07637; K03407; K07682; K07654; K07652; K08475; K07639; K07673; K01120; K07641; K07646; K07711; K02575; K07768; K07778; K11354; K07718; K07651; K07648; K07679; K02478; K07669;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470696.1 1 121 evalue:3.9e-45 qcov:99.20 identity:76.90;
kegg_pathway_id 02020; 04011; 03090; 00790; 00983; 00230; 05111; 00240;
kegg_pathway_name Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system; Folate biosynthesis; Drug metabolism - other enzymes; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:7.8e-26 score:89.7 best_domain_score:89.5 name:Response_reg;
sprot_desc Response regulator MprA;
sprot_id sp|A5U123|MPRA_MYCTA;
sprot_target db:uniprot_sprot|sp|A5U123|MPRA_MYCTA 1 119 evalue:3.7e-18 qcov:97.50 identity:41.20;
38024 38368 CDS
ID metaerg.pl|08008
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470695.1 1 95 evalue:5.6e-22 qcov:83.30 identity:58.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
tm_num 2;
38024 38368 transmembrane_helix
ID metaerg.pl|08009
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i38084-38143o38186-38254i;
38373 41090 CDS
ID metaerg.pl|08010
allgo_ids GO:0000155; GO:0007165;
allko_ids K07778; K11354; K11633; K07768; K00873; K07711; K13533; K11328; K07679; K07648; K07651; K07718; K07698; K07654; K07682; K00936; K07649; K07777; K03407; K07637; K13598; K07641; K07646; K07639; K08475; K07673; K07652; K07708; K07645; K07677; K07704; K10909; K08282; K07643; K11231; K02491; K11711; K07642; K02484; K11356; K11640; K02482; K14489; K02480; K07638; K07653; K07636; K11527; K02030; K13587; K10715; K07678; K02668; K03388; K08479; K10916; K02489; K07697; K07716; K07710; K07640; K07656; K01768; K12767; K02486; K11383; K11520; K14509; K07769; K04757; K11629; K10125; K11357; K07647; K10942; K13040; K07675; K07717; K01769; K07650; K06379; K07676; K10681; K07709; K13532; K07644;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470694.1 1 898 evalue:0.0e+00 qcov:99.20 identity:83.00;
kegg_pathway_id 00010; 00710; 05111; 00230; 03090; 00620; 04011; 02020; 00790;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Vibrio cholerae pathogenic cycle; Purine metabolism; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF02518; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:3e-18 score:65.6 best_domain_score:64.0 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:5.6e-15 score:54.4 best_domain_score:54.4 name:HisKA;
sp YES;
tm_num 12;
38373 38444 signal_peptide
ID metaerg.pl|08011
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
38373 41090 transmembrane_helix
ID metaerg.pl|08012
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology o38385-38444i38493-38561o38571-38630i38712-38780o38850-38918i38955-39023o39099-39167i39204-39272o39390-39458i39516-39584o39597-39665i39684-39752o;
41224 42525 CDS
ID metaerg.pl|08013
allec_ids 1.3.1.1;
allgo_ids GO:0016491; GO:0055114; GO:0004159; GO:0051536;
allko_ids K00266; K03388; K00384; K00264; K17722;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797955.1 1 432 evalue:3.1e-182 qcov:99.80 identity:74.20;
kegg_pathway_id 00240; 00790; 00251; 00910;
kegg_pathway_name Pyrimidine metabolism; Folate biosynthesis; Glutamate metabolism; Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF01593; PF01266; PF00890; PF01494; PF14691; PF03486; PF13450; PF00070; PF07992; PF13738;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; FAD binding domain; Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; DAO; FAD_binding_2; FAD_binding_3; Fer4_20; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:1.2e-07 score:30.6 best_domain_score:29.7 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:8.3e-09 score:34.7 best_domain_score:28.6 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:3.5e-07 score:28.9 best_domain_score:24.5 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:2.1e-05 score:23.2 best_domain_score:22.8 name:FAD_binding_3; db:Pfam-A.hmm|PF14691.6 evalue:1.1e-35 score:121.1 best_domain_score:120.3 name:Fer4_20; db:Pfam-A.hmm|PF03486.14 evalue:4.7e-07 score:28.1 best_domain_score:26.1 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:1.7e-12 score:46.7 best_domain_score:42.0 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:2.6e-15 score:56.0 best_domain_score:33.4 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:3.3e-29 score:101.3 best_domain_score:100.4 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:3.3e-10 score:38.9 best_domain_score:20.2 name:Pyr_redox_3;
sprot_desc NAD-dependent dihydropyrimidine dehydrogenase subunit PreT;
sprot_id sp|Q8X645|PRET_ECO57;
sprot_target db:uniprot_sprot|sp|Q8X645|PRET_ECO57 23 430 evalue:2.6e-58 qcov:94.20 identity:36.10;
42568 43866 CDS
ID metaerg.pl|08014
allec_ids 1.3.1.1; 1.3.-.-;
allgo_ids GO:0005737; GO:0016627; GO:0055114; GO:0051539; GO:0017113; GO:0004159; GO:0051536; GO:0046872; GO:0003954; GO:0050661; GO:0002058; GO:0006208; GO:0006210; GO:0006212;
allko_ids K00245; K00235; K00873; K11260; K00122; K00443; K03390; K00240; K00246; K00123; K11181; K00172; K00124; K00533; K00436; K00390; K05588; K00176; K03388; K00207; K00125; K00226; K00205; K00441; K00171; K17723;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480487.1 1 432 evalue:7.6e-237 qcov:100.00 identity:90.80;
kegg_pathway_id 00680; 00410; 00190; 02020; 00633; 00230; 00770; 00020; 00710; 00010; 00920; 00790; 00640; 00650; 00630; 05012; 00620; 00632; 00240; 00983; 00720;
kegg_pathway_name Methane metabolism; beta-Alanine metabolism; Oxidative phosphorylation; Two-component system - General; Trinitrotoluene degradation; Purine metabolism; Pantothenate and CoA biosynthesis; Citrate cycle (TCA cycle); Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Sulfur metabolism; Folate biosynthesis; Propanoate metabolism; Butanoate metabolism; Glyoxylate and dicarboxylate metabolism; Parkinson's disease; Pyruvate metabolism; Benzoate degradation via CoA ligation; Pyrimidine metabolism; Drug metabolism - other enzymes; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id PWY-5140; PWY-5319;
metacyc_pathway_name cannabinoid biosynthesis;; coumarin metabolism (to melilotic acid);;
metacyc_pathway_type TERPENOPHENOLICS-SYN;; COUMARIN-SYN; PHENYLPROPANOID-DERIVATIVE-DEG;;
pfam_acc PF01180; PF01207; PF00037; PF13237; PF12797; PF14697; PF17179; PF12837; PF12838;
pfam_desc Dihydroorotate dehydrogenase; Dihydrouridine synthase (Dus); 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain;
pfam_id DHO_dh; Dus; Fer4; Fer4_10; Fer4_2; Fer4_21; Fer4_22; Fer4_6; Fer4_7;
pfam_target db:Pfam-A.hmm|PF01180.21 evalue:2.4e-26 score:91.8 best_domain_score:91.5 name:DHO_dh; db:Pfam-A.hmm|PF01207.17 evalue:1.4e-07 score:30.2 best_domain_score:29.1 name:Dus; db:Pfam-A.hmm|PF00037.27 evalue:2.7e-09 score:35.7 best_domain_score:20.5 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:4.6e-06 score:25.9 best_domain_score:23.7 name:Fer4_10; db:Pfam-A.hmm|PF12797.7 evalue:4e-06 score:25.8 best_domain_score:15.9 name:Fer4_2; db:Pfam-A.hmm|PF14697.6 evalue:1.9e-24 score:84.8 best_domain_score:84.3 name:Fer4_21; db:Pfam-A.hmm|PF17179.4 evalue:1.2e-06 score:28.5 best_domain_score:15.7 name:Fer4_22; db:Pfam-A.hmm|PF12837.7 evalue:1.1e-07 score:30.9 best_domain_score:28.7 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:2.7e-06 score:27.1 best_domain_score:26.3 name:Fer4_7;
sprot_desc NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;
sprot_id sp|Q8ZNL7|PREA_SALTY;
sprot_target db:uniprot_sprot|sp|Q8ZNL7|PREA_SALTY 3 400 evalue:6.1e-84 qcov:92.10 identity:40.80;
tigrfam_acc TIGR01037;
tigrfam_desc dihydroorotate dehydrogenase family protein;
tigrfam_name pyrD_sub1_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01037 evalue:6.1e-48 score:162.6 best_domain_score:162.2 name:TIGR01037;
44463 43867 CDS
ID metaerg.pl|08015
allgo_ids GO:0045892; GO:0003677; GO:0045893;
allko_ids K09017;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797959.1 3 198 evalue:4.4e-83 qcov:99.00 identity:77.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF08362; PF00440;
pfam_desc YcdC-like protein, C-terminal region; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_3; TetR_N;
pfam_target db:Pfam-A.hmm|PF08362.11 evalue:4.6e-47 score:158.8 best_domain_score:158.5 name:TetR_C_3; db:Pfam-A.hmm|PF00440.23 evalue:7.7e-16 score:56.9 best_domain_score:56.1 name:TetR_N;
sprot_desc HTH-type transcriptional regulator RutR;
sprot_id sp|P0ACU3|RUTR_ECOL6;
sprot_target db:uniprot_sprot|sp|P0ACU3|RUTR_ECOL6 3 176 evalue:3.7e-44 qcov:87.90 identity:49.40;
44625 45665 CDS
ID metaerg.pl|08016
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Dinoroseobacter;s__Dinoroseobacter shibae;
genomedb_acc GCF_000018145.1;
genomedb_target db:genomedb|GCF_000018145.1|WP_012177870.1 12 345 evalue:3.9e-119 qcov:96.50 identity:64.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00144;
pfam_desc Beta-lactamase;
pfam_id Beta-lactamase;
pfam_target db:Pfam-A.hmm|PF00144.24 evalue:2e-22 score:79.1 best_domain_score:78.2 name:Beta-lactamase;
sp YES;
44625 44729 signal_peptide
ID metaerg.pl|08017
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
45795 47045 CDS
ID metaerg.pl|08018
allec_ids 3.5.1.87; 3.5.-.-;
allgo_ids GO:0016787; GO:0016813; GO:0046872; GO:0050538; GO:0008652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470690.1 1 416 evalue:1.0e-214 qcov:100.00 identity:85.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF01546;
pfam_desc Peptidase family M20/M25/M40;
pfam_id Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF01546.28 evalue:7.8e-38 score:129.5 best_domain_score:129.1 name:Peptidase_M20;
sprot_desc N-carbamoyl-L-amino-acid hydrolase;
sprot_id sp|Q6DTN4|HYUC_RHIML;
sprot_target db:uniprot_sprot|sp|Q6DTN4|HYUC_RHIML 1 415 evalue:5.2e-165 qcov:99.80 identity:66.00;
tigrfam_acc TIGR01879;
tigrfam_desc amidase, hydantoinase/carbamoylase family;
tigrfam_name hydantase;
tigrfam_target db:TIGRFAMs.hmm|TIGR01879 evalue:2.1e-116 score:388.3 best_domain_score:388.1 name:TIGR01879;
47083 48534 CDS
ID metaerg.pl|08019
allec_ids 3.5.2.2;
allgo_ids GO:0016787; GO:0005829; GO:0004157; GO:0046872;
allko_ids K01465; K01464;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797963.1 1 483 evalue:5.8e-270 qcov:100.00 identity:93.20;
kegg_pathway_id 00770; 00240; 00410; 00983;
kegg_pathway_name Pantothenate and CoA biosynthesis; Pyrimidine metabolism; beta-Alanine metabolism; Drug metabolism - other enzymes;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id PWY-3982;
metacyc_pathway_name uracil degradation I (reductive);;
metacyc_pathway_type Beta-Alanine-Biosynthesis; Uracil-Degradation;;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:9.9e-30 score:103.2 best_domain_score:102.6 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:3.6e-16 score:58.9 best_domain_score:36.3 name:Amidohydro_3;
sprot_desc D-hydantoinase/dihydropyrimidinase;
sprot_id sp|Q9I676|HYDA_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I676|HYDA_PSEAE 1 475 evalue:1.1e-145 qcov:98.30 identity:52.80;
tigrfam_acc TIGR02033;
tigrfam_desc dihydropyrimidinase;
tigrfam_name D-hydantoinase;
tigrfam_target db:TIGRFAMs.hmm|TIGR02033 evalue:1.2e-183 score:610.3 best_domain_score:610.1 name:TIGR02033;
48540 48950 CDS
ID metaerg.pl|08020
allko_ids K01759;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Mameliella;s__Mameliella alba;
genomedb_acc GCF_900101505.1;
genomedb_target db:genomedb|GCF_900101505.1|WP_074621214.1 2 132 evalue:1.5e-45 qcov:96.30 identity:66.40;
kegg_pathway_id 00620; 04011;
kegg_pathway_name Pyruvate metabolism; MAPK signaling pathway - yeast;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00903;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:1.2e-09 score:37.6 best_domain_score:37.3 name:Glyoxalase;
48947 49750 CDS
ID metaerg.pl|08021
allgo_ids GO:0005524; GO:0016887;
allko_ids K02000; K11962; K09812; K01990; K10243; K02023; K10235; K05816; K11076; K02049; K01995; K02065; K01998; K10111; K10112; K02062; K02045; K11072; K02068; K06861; K02071; K01996; K10199; K11084; K02032; K02017; K02010; K05847; K01997; K02003; K02052; K02006;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480491.1 1 267 evalue:1.5e-129 qcov:100.00 identity:86.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00004; PF09818; PF00005;
pfam_desc ATPase family associated with various cellular activities (AAA); Predicted ATPase of the ABC class; ABC transporter;
pfam_id AAA; ABC_ATPase; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:0.00014 score:21.5 best_domain_score:18.5 name:AAA; db:Pfam-A.hmm|PF09818.9 evalue:3e-05 score:22.3 best_domain_score:21.3 name:ABC_ATPase; db:Pfam-A.hmm|PF00005.27 evalue:2.6e-29 score:101.7 best_domain_score:101.3 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein MJ0412;
sprot_id sp|Q57855|Y412_METJA;
sprot_target db:uniprot_sprot|sp|Q57855|Y412_METJA 14 256 evalue:2.9e-52 qcov:91.00 identity:44.40;
49823 50719 CDS
ID metaerg.pl|08022
allgo_ids GO:0016020; GO:0055085;
allko_ids K02050;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470687.1 1 298 evalue:2.3e-139 qcov:100.00 identity:90.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:3.3e-19 score:68.6 best_domain_score:68.6 name:BPD_transp_1;
sp YES;
tm_num 6;
49823 49903 signal_peptide
ID metaerg.pl|08023
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
49823 50719 transmembrane_helix
ID metaerg.pl|08024
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i49841-49909o50117-50185i50246-50314o50324-50392i50501-50569o50612-50680i;
50716 51828 CDS
ID metaerg.pl|08025
allgo_ids GO:0016020; GO:0055085;
allko_ids K02050;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084635093.1 66 370 evalue:1.9e-140 qcov:82.40 identity:86.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:7e-18 score:64.2 best_domain_score:64.2 name:BPD_transp_1;
tm_num 8;
50716 51828 transmembrane_helix
ID metaerg.pl|08026
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i50734-50802o50890-50958i50977-51036o51238-51306i51343-51411o51427-51495i51583-51651o51715-51783i;
51879 52868 CDS
ID metaerg.pl|08027
allgo_ids GO:0005886; GO:0009228; GO:0009229;
allko_ids K02051; K15598;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798032.1 1 329 evalue:6.7e-169 qcov:100.00 identity:89.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF09084;
pfam_desc NMT1/THI5 like;
pfam_id NMT1;
pfam_target db:Pfam-A.hmm|PF09084.11 evalue:1.4e-33 score:115.9 best_domain_score:115.5 name:NMT1;
sp YES;
sprot_desc Formylaminopyrimidine-binding protein;
sprot_id sp|Q9K9G5|THIY_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K9G5|THIY_BACHD 22 263 evalue:6.4e-17 qcov:73.60 identity:29.10;
tm_num 1;
51879 51944 signal_peptide
ID metaerg.pl|08028
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
51879 52868 transmembrane_helix
ID metaerg.pl|08029
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i51891-51944o;
55469 52908 CDS
ID metaerg.pl|08030
allec_ids 3.4.11.2;
allgo_ids GO:0008237; GO:0008270; GO:0004177;
allko_ids K01256;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797969.1 1 853 evalue:0.0e+00 qcov:100.00 identity:80.20;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id PWY-4041; PWY-4061;
metacyc_pathway_name γ-glutamyl cycle;; glutathione-mediated detoxification I;;
metacyc_pathway_type Reductants; Super-Pathways;; Detoxification; Other-Degradation;;
pfam_acc PF11940; PF17432; PF01433; PF17900;
pfam_desc Domain of unknown function (DUF3458) Ig-like fold; Domain of unknown function (DUF3458_C) ARM repeats; Peptidase family M1 domain; Peptidase M1 N-terminal domain;
pfam_id DUF3458; DUF3458_C; Peptidase_M1; Peptidase_M1_N;
pfam_target db:Pfam-A.hmm|PF11940.8 evalue:2.9e-28 score:97.4 best_domain_score:96.6 name:DUF3458; db:Pfam-A.hmm|PF17432.2 evalue:6.9e-97 score:323.9 best_domain_score:323.2 name:DUF3458_C; db:Pfam-A.hmm|PF01433.20 evalue:2.6e-50 score:170.2 best_domain_score:169.7 name:Peptidase_M1; db:Pfam-A.hmm|PF17900.1 evalue:6.5e-09 score:35.5 best_domain_score:34.9 name:Peptidase_M1_N;
sprot_desc Aminopeptidase N;
sprot_id sp|P37893|AMPN_CAUVC;
sprot_target db:uniprot_sprot|sp|P37893|AMPN_CAUVC 1 852 evalue:1.9e-214 qcov:99.90 identity:48.30;
tigrfam_acc TIGR02414;
tigrfam_desc aminopeptidase N;
tigrfam_mainrole Protein fate;
tigrfam_name pepN_proteo;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02414 evalue:0 score:1063.5 best_domain_score:1063.3 name:TIGR02414;
55991 55542 CDS
ID metaerg.pl|08031
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470685.1 1 149 evalue:1.2e-43 qcov:100.00 identity:61.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00188;
pfam_desc Cysteine-rich secretory protein family;
pfam_id CAP;
pfam_target db:Pfam-A.hmm|PF00188.26 evalue:5.9e-20 score:71.6 best_domain_score:71.4 name:CAP;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|O31398|YKWD_BACSU;
sprot_target db:uniprot_sprot|sp|O31398|YKWD_BACSU 32 147 evalue:5.9e-10 qcov:77.90 identity:32.50;
55542 55598 signal_peptide
ID metaerg.pl|08032
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
56202 56909 CDS
ID metaerg.pl|08033
allgo_ids GO:0005737; GO:0042803; GO:0030643; GO:0045936; GO:2000186; GO:0006817;
allko_ids K02039;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796650.1 1 235 evalue:1.6e-95 qcov:100.00 identity:78.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF01895;
pfam_desc PhoU domain;
pfam_id PhoU;
pfam_target db:Pfam-A.hmm|PF01895.19 evalue:4.4e-37 score:125.7 best_domain_score:69.5 name:PhoU;
sprot_desc Phosphate-specific transport system accessory protein PhoU homolog;
sprot_id sp|P0CAV9|PHOU_CAUVC;
sprot_target db:uniprot_sprot|sp|P0CAV9|PHOU_CAUVC 1 229 evalue:2.5e-39 qcov:97.40 identity:39.70;
tigrfam_acc TIGR02135;
tigrfam_desc phosphate transport system regulatory protein PhoU;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name phoU_full;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02135 evalue:1.1e-60 score:204.0 best_domain_score:203.8 name:TIGR02135;
56913 57605 CDS
ID metaerg.pl|08034
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0000156; GO:0006817; GO:0006355;
allko_ids K07644; K07709; K06379; K07676; K10681; K07650; K01769; K07675; K07717; K07647; K10125; K11357; K04757; K07769; K12767; K11383; K13761; K02486; K01768; K07710; K07640; K07716; K02489; K10916; K08479; K03388; K02668; K10715; K07678; K11527; K07636; K07653; K07638; K02480; K02482; K11640; K11356; K02484; K00760; K07642; K11711; K02491; K11231; K01937; K08282; K07704; K10909; K07645; K07677; K07708; K07652; K08475; K07639; K01120; K07673; K07641; K07646; K07637; K03407; K07682; K07777; K07654; K07718; K07651; K07648; K07679; K02478; K07711; K08884; K07768; K07778; K11354; K07657;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796859.1 1 230 evalue:9.3e-109 qcov:100.00 identity:85.70;
kegg_pathway_id 00790; 04011; 02020; 03090; 05111; 00230; 00240; 00983;
kegg_pathway_name Folate biosynthesis; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:1.1e-28 score:98.9 best_domain_score:98.5 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:1.4e-25 score:88.4 best_domain_score:85.6 name:Trans_reg_C;
sprot_desc Phosphate regulon transcriptional regulatory protein PhoB;
sprot_id sp|Q52990|PHOB_RHIME;
sprot_target db:uniprot_sprot|sp|Q52990|PHOB_RHIME 7 229 evalue:4.4e-65 qcov:97.00 identity:54.30;
tigrfam_acc TIGR02154;
tigrfam_desc phosphate regulon transcriptional regulatory protein PhoB;
tigrfam_mainrole Signal transduction;
tigrfam_name PhoB;
tigrfam_sub1role Two-component systems;
tigrfam_target db:TIGRFAMs.hmm|TIGR02154 evalue:1.5e-94 score:314.7 best_domain_score:314.5 name:TIGR02154;
57681 57971 CDS
ID metaerg.pl|08035
allec_ids 6.3.5.-;
allgo_ids GO:0006450; GO:0005524; GO:0050567; GO:0006412;
allko_ids K02435;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470684.1 1 96 evalue:2.8e-38 qcov:100.00 identity:86.50;
kegg_pathway_id 00251; 00252;
kegg_pathway_name Glutamate metabolism; Alanine and aspartate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id PWY490-4;
metacyc_pathway_name L-asparagine biosynthesis III (tRNA-dependent);;
metacyc_pathway_type ASPARAGINE-SYN; Aminoacyl-tRNAs-Charging;;
pfam_acc PF02686;
pfam_desc Glu-tRNAGln amidotransferase C subunit;
pfam_id Glu-tRNAGln;
pfam_target db:Pfam-A.hmm|PF02686.15 evalue:1e-19 score:69.8 best_domain_score:69.3 name:Glu-tRNAGln;
sprot_desc Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C;
sprot_id sp|A4WUQ3|GATC_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WUQ3|GATC_RHOS5 4 96 evalue:3.1e-36 qcov:96.90 identity:83.90;
tigrfam_acc TIGR00135;
tigrfam_desc aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name gatC;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00135 evalue:3.1e-25 score:87.5 best_domain_score:87.3 name:TIGR00135;
57968 59449 CDS
ID metaerg.pl|08036
allec_ids 6.3.5.7; 6.3.5.-;
allgo_ids GO:0030956; GO:0004040; GO:0005524; GO:0050567; GO:0006412;
allko_ids K02433;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470683.1 1 493 evalue:2.7e-254 qcov:100.00 identity:88.80;
kegg_pathway_id 00251; 00252;
kegg_pathway_name Glutamate metabolism; Alanine and aspartate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id PWY490-4; PWY-5921;
metacyc_pathway_name L-asparagine biosynthesis III (tRNA-dependent);; glutaminyl-tRNAgln biosynthesis via transamidation;;
metacyc_pathway_type ASPARAGINE-SYN; Aminoacyl-tRNAs-Charging;; Aminoacyl-tRNAs-Charging;;
pfam_acc PF01425;
pfam_desc Amidase;
pfam_id Amidase;
pfam_target db:Pfam-A.hmm|PF01425.21 evalue:2.2e-144 score:481.0 best_domain_score:480.9 name:Amidase;
sprot_desc Glutamyl-tRNA(Gln) amidotransferase subunit A;
sprot_id sp|Q1GFB5|GATA_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GFB5|GATA_RUEST 1 493 evalue:8.4e-239 qcov:100.00 identity:82.20;
tigrfam_acc TIGR00132;
tigrfam_desc aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name gatA;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00132 evalue:4.3e-164 score:545.8 best_domain_score:545.6 name:TIGR00132;
59481 60326 CDS
ID metaerg.pl|08037
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480497.1 1 281 evalue:2.4e-82 qcov:100.00 identity:60.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
sp YES;
59481 59537 lipoprotein_signal_peptide
ID metaerg.pl|08038
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
60402 60995 CDS
ID metaerg.pl|08039
allec_ids 3.5.1.28;
allgo_ids GO:0008745; GO:0009253; GO:0009279; GO:0019867; GO:0009392; GO:0008270; GO:0071555;
allko_ids K01447; K11066; K01446; K01448;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657657.1 1 195 evalue:7.8e-72 qcov:99.00 identity:69.70;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF01510;
pfam_desc N-acetylmuramoyl-L-alanine amidase;
pfam_id Amidase_2;
pfam_target db:Pfam-A.hmm|PF01510.25 evalue:1e-29 score:102.8 best_domain_score:102.3 name:Amidase_2;
sprot_desc N-acetylmuramoyl-L-alanine amidase AmiD;
sprot_id sp|P75820|AMID_ECOLI;
sprot_target db:uniprot_sprot|sp|P75820|AMID_ECOLI 1 194 evalue:4.2e-24 qcov:98.50 identity:35.10;
61610 61074 CDS
ID metaerg.pl|08040
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245352.1 1 178 evalue:9.5e-69 qcov:100.00 identity:74.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF10003;
pfam_desc Integral membrane protein (DUF2244);
pfam_id DUF2244;
pfam_target db:Pfam-A.hmm|PF10003.9 evalue:2.3e-35 score:120.5 best_domain_score:120.3 name:DUF2244;
tm_num 2;
61610 61074 transmembrane_helix
ID metaerg.pl|08041
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i61197-61265o61278-61331i;
63283 61610 CDS
ID metaerg.pl|08042
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0009060; GO:0016021; GO:0020037; GO:0055114; GO:0005886; GO:0045277; GO:0046872; GO:0015990; GO:0006119;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797983.1 1 557 evalue:0.0e+00 qcov:100.00 identity:92.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metabolic_acc TIGR02891;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, caa3-type;gene:CoxA;;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00115;
pfam_desc Cytochrome C and Quinol oxidase polypeptide I;
pfam_id COX1;
pfam_target db:Pfam-A.hmm|PF00115.20 evalue:3.6e-151 score:503.1 best_domain_score:502.5 name:COX1;
sprot_desc Cytochrome c oxidase subunit 1-beta;
sprot_id sp|P98002|COX1B_PARDE;
sprot_target db:uniprot_sprot|sp|P98002|COX1B_PARDE 1 557 evalue:3.3e-284 qcov:100.00 identity:82.30;
tigrfam_acc TIGR02891;
tigrfam_desc cytochrome c oxidase, subunit I;
tigrfam_mainrole Energy metabolism;
tigrfam_name CtaD_CoxA;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02891 evalue:3e-205 score:681.8 best_domain_score:681.6 name:TIGR02891;
tm_num 12;
63283 61610 transmembrane_helix
ID metaerg.pl|08043
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i61697-61765o61874-61942i62000-62068o62153-62221i62279-62347o62423-62491i62510-62578o62621-62689i62726-62794o62837-62905i62939-63007o63050-63118i;
64213 63506 CDS
ID metaerg.pl|08044
allec_ids 2.3.1.181;
allgo_ids GO:0006464; GO:0005737; GO:0033819; GO:0102555; GO:0009249;
allko_ids K03801;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657658.1 18 234 evalue:2.4e-99 qcov:92.30 identity:81.10;
kegg_pathway_id 00785;
kegg_pathway_name Lipoic acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id PWY0-501;
metacyc_pathway_name lipoate biosynthesis and incorporation I;;
metacyc_pathway_type Lipoate-Biosynthesis;;
pfam_acc PF03099;
pfam_desc Biotin/lipoate A/B protein ligase family;
pfam_id BPL_LplA_LipB;
pfam_target db:Pfam-A.hmm|PF03099.19 evalue:9.1e-06 score:24.8 best_domain_score:24.2 name:BPL_LplA_LipB;
sprot_desc Octanoyltransferase;
sprot_id sp|A4WQA7|LIPB_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WQA7|LIPB_RHOS5 17 229 evalue:9.0e-98 qcov:90.60 identity:77.90;
tigrfam_acc TIGR00214;
tigrfam_desc lipoyl(octanoyl) transferase;
tigrfam_mainrole Protein fate;
tigrfam_name lipB;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00214 evalue:1.8e-43 score:147.4 best_domain_score:145.5 name:TIGR00214;
64392 64478 tRNA
ID metaerg.pl|08045
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
name tRNA_Leu_gag;
64734 65840 CDS
ID metaerg.pl|08046
allec_ids 7.6.2.11; 3.6.3.31;
allgo_ids GO:0005524; GO:0016887; GO:0043190; GO:0015594; GO:0015595;
allko_ids K02032; K02017; K11084; K02004; K02006; K02052; K02010; K02056; K05847; K01997; K02003; K02045; K11072; K10239; K02062; K10441; K10199; K06861; K02071; K01996; K11076; K10235; K05816; K06857; K10112; K01998; K10111; K10562; K02031; K02049; K01995; K02065; K02000; K11962; K10230; K11080; K10000; K02023; K02018; K09812; K10195; K01990; K10243;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797985.1 1 367 evalue:5.4e-191 qcov:99.70 identity:90.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00005; PF08402;
pfam_desc ABC transporter; TOBE domain;
pfam_id ABC_tran; TOBE_2;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.6e-33 score:115.4 best_domain_score:114.4 name:ABC_tran; db:Pfam-A.hmm|PF08402.10 evalue:1.6e-12 score:46.6 best_domain_score:44.6 name:TOBE_2;
sprot_desc Spermidine/putrescine import ATP-binding protein PotA;
sprot_id sp|Q1AS06|POTA_RUBXD;
sprot_target db:uniprot_sprot|sp|Q1AS06|POTA_RUBXD 22 364 evalue:3.1e-76 qcov:93.20 identity:42.30;
tigrfam_acc TIGR01187;
tigrfam_desc polyamine ABC transporter, ATP-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name potA;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01187 evalue:7.2e-114 score:379.4 best_domain_score:379.1 name:TIGR01187;
65939 67042 CDS
ID metaerg.pl|08047
allko_ids K02055;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480503.1 1 367 evalue:9.7e-193 qcov:100.00 identity:88.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF01547; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:4.7e-12 score:45.7 best_domain_score:44.8 name:SBP_bac_1; db:Pfam-A.hmm|PF13416.6 evalue:1.3e-36 score:126.1 best_domain_score:125.7 name:SBP_bac_8;
sp YES;
65939 66007 signal_peptide
ID metaerg.pl|08048
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
67136 68443 CDS
ID metaerg.pl|08049
allgo_ids GO:0016020; GO:0055085;
allko_ids K02054;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084634847.1 1 435 evalue:3.2e-211 qcov:100.00 identity:86.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:3.7e-14 score:52.1 best_domain_score:51.9 name:BPD_transp_1;
tm_num 7;
67136 68443 transmembrane_helix
ID metaerg.pl|08050
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i67265-67333o67787-67855i67874-67927o67937-68005i68042-68110o68210-68278i68336-68404o;
68457 69308 CDS
ID metaerg.pl|08051
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K02053; K11070;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797991.1 1 283 evalue:5.8e-137 qcov:100.00 identity:92.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:3.9e-17 score:61.8 best_domain_score:61.8 name:BPD_transp_1;
sprot_desc Spermidine/putrescine transport system permease protein PotC;
sprot_id sp|P45169|POTC_HAEIN;
sprot_target db:uniprot_sprot|sp|P45169|POTC_HAEIN 23 273 evalue:2.6e-27 qcov:88.70 identity:31.50;
tm_num 6;
68457 69308 transmembrane_helix
ID metaerg.pl|08052
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i68514-68582o68703-68771i68808-68876o68904-68972i69030-69098o69198-69266i;
70406 69477 CDS
ID metaerg.pl|08053
allgo_ids GO:0016021; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798346.1 1 309 evalue:1.6e-143 qcov:100.00 identity:83.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF03547;
pfam_desc Membrane transport protein;
pfam_id Mem_trans;
pfam_target db:Pfam-A.hmm|PF03547.18 evalue:4.2e-33 score:113.5 best_domain_score:62.6 name:Mem_trans;
tm_num 10;
70406 69477 transmembrane_helix
ID metaerg.pl|08054
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology o69486-69539i69576-69644o69672-69740i69759-69818o69846-69914i69975-70043o70071-70130i70149-70217o70245-70313i70332-70400o;
71204 70407 CDS
ID metaerg.pl|08055
allec_ids 2.3.1.181;
allgo_ids GO:0005737; GO:0033819; GO:0102555; GO:0009249;
allko_ids K03801;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482189.1 1 265 evalue:4.3e-134 qcov:100.00 identity:84.20;
kegg_pathway_id 00785;
kegg_pathway_name Lipoic acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id PWY0-501;
metacyc_pathway_name lipoate biosynthesis and incorporation I;;
metacyc_pathway_type Lipoate-Biosynthesis;;
pfam_acc PF00753; PF12706;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:4.9e-09 score:35.7 best_domain_score:35.7 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:8.7e-32 score:109.5 best_domain_score:109.1 name:Lactamase_B_2;
sprot_desc Octanoyltransferase;
sprot_id sp|Q7MUY1|LIPB_PORGI;
sprot_target db:uniprot_sprot|sp|Q7MUY1|LIPB_PORGI 4 264 evalue:2.1e-34 qcov:98.50 identity:34.30;
71986 71201 CDS
ID metaerg.pl|08056
allec_ids 3.1.-.-;
allgo_ids GO:0016788; GO:0005829; GO:0016888; GO:0046872;
allko_ids K03424;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798350.1 1 260 evalue:2.5e-118 qcov:99.60 identity:81.50;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01026;
pfam_desc TatD related DNase;
pfam_id TatD_DNase;
pfam_target db:Pfam-A.hmm|PF01026.21 evalue:2.7e-72 score:242.4 best_domain_score:242.3 name:TatD_DNase;
sprot_desc Uncharacterized metal-dependent hydrolase HI_0454;
sprot_id sp|P44718|Y454_HAEIN;
sprot_target db:uniprot_sprot|sp|P44718|Y454_HAEIN 5 256 evalue:1.1e-48 qcov:96.60 identity:41.20;
tigrfam_acc TIGR00010;
tigrfam_desc hydrolase, TatD family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00010;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00010 evalue:4.7e-80 score:267.8 best_domain_score:267.7 name:TIGR00010;
73118 72009 CDS
ID metaerg.pl|08057
allgo_ids GO:0005524;
allko_ids K02341; K02340; K02343;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481094.1 1 369 evalue:9.0e-154 qcov:100.00 identity:77.00;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00004; PF13177;
pfam_desc ATPase family associated with various cellular activities (AAA); DNA polymerase III, delta subunit;
pfam_id AAA; DNA_pol3_delta2;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:4.4e-07 score:29.6 best_domain_score:26.7 name:AAA; db:Pfam-A.hmm|PF13177.6 evalue:2.2e-33 score:114.6 best_domain_score:113.1 name:DNA_pol3_delta2;
73841 73212 CDS
ID metaerg.pl|08058
allec_ids 2.7.4.9;
allgo_ids GO:0005524; GO:0004798; GO:0006233; GO:0006235;
allko_ids K00943;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481093.1 1 209 evalue:1.7e-80 qcov:100.00 identity:77.40;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id P1-PWY; PWY-6545; PWY0-166;
metacyc_pathway_name ; pyrimidine deoxyribonucleotides de novo biosynthesis III;; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);;
metacyc_pathway_type ; Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF13671; PF02223;
pfam_desc AAA domain; Thymidylate kinase;
pfam_id AAA_33; Thymidylate_kin;
pfam_target db:Pfam-A.hmm|PF13671.6 evalue:1.5e-06 score:27.7 best_domain_score:27.2 name:AAA_33; db:Pfam-A.hmm|PF02223.17 evalue:5.6e-43 score:146.0 best_domain_score:145.8 name:Thymidylate_kin;
sprot_desc Thymidylate kinase;
sprot_id sp|A8LRW0|KTHY_DINSH;
sprot_target db:uniprot_sprot|sp|A8LRW0|KTHY_DINSH 8 199 evalue:4.2e-70 qcov:91.90 identity:71.80;
tigrfam_acc TIGR00041;
tigrfam_desc dTMP kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name DTMP_kinase;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00041 evalue:1e-43 score:148.5 best_domain_score:148.3 name:TIGR00041;
75016 73841 CDS
ID metaerg.pl|08059
allec_ids 3.4.16.4;
allgo_ids GO:0006508; GO:0009002; GO:0005576; GO:0004175; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01286; K07258;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481092.1 10 391 evalue:8.6e-155 qcov:97.70 identity:73.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id PWY-5265; PWY-6471; PEPTIDOGLYCANSYN-PWY;
metacyc_pathway_name peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF13354; PF07943; PF00768;
pfam_desc Beta-lactamase enzyme family; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase;
pfam_id Beta-lactamase2; PBP5_C; Peptidase_S11;
pfam_target db:Pfam-A.hmm|PF13354.6 evalue:1.7e-11 score:43.3 best_domain_score:42.9 name:Beta-lactamase2; db:Pfam-A.hmm|PF07943.13 evalue:9.9e-10 score:37.8 best_domain_score:37.2 name:PBP5_C; db:Pfam-A.hmm|PF00768.20 evalue:8e-54 score:181.8 best_domain_score:181.3 name:Peptidase_S11;
sp YES;
sprot_desc D-alanyl-D-alanine carboxypeptidase DacF;
sprot_id sp|P38422|DACF_BACSU;
sprot_target db:uniprot_sprot|sp|P38422|DACF_BACSU 35 367 evalue:1.8e-42 qcov:85.20 identity:32.90;
tm_num 1;
73841 73918 signal_peptide
ID metaerg.pl|08060
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
75016 73841 transmembrane_helix
ID metaerg.pl|08061
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i73859-73927o;
76010 75057 CDS
ID metaerg.pl|08062
allgo_ids GO:0042834;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798358.1 1 317 evalue:6.2e-79 qcov:100.00 identity:55.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF05036;
pfam_desc Sporulation related domain;
pfam_id SPOR;
pfam_target db:Pfam-A.hmm|PF05036.13 evalue:9.8e-12 score:44.3 best_domain_score:43.4 name:SPOR;
sp YES;
75057 75119 lipoprotein_signal_peptide
ID metaerg.pl|08063
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
77885 76227 CDS
ID metaerg.pl|08064
allec_ids 6.3.5.1; 6.3.1.5;
allgo_ids GO:0006807; GO:0005524; GO:0016787; GO:0003952; GO:0008795; GO:0009435;
allko_ids K03820;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469099.1 1 550 evalue:1.6e-268 qcov:99.60 identity:81.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
metacyc_pathway_id PWY0-781; PWY-5653; NADSYN-PWY; PWY-3502; PWY-5381; PYRIDNUCSYN-PWY;
metacyc_pathway_name aspartate superpathway;; NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde;; NAD de novo biosynthesis II (from tryptophan);; superpathway of NAD biosynthesis in eukaryotes;; pyridine nucleotide cycling (plants);; NAD de novo biosynthesis I (from aspartate);;
metacyc_pathway_type Super-Pathways;; NAD-SYN;; NAD-SYN; Super-Pathways;; NAD-SYN; Super-Pathways;; NAD-Metabolism;; NAD-SYN;;
pfam_acc PF00795; PF02540;
pfam_desc Carbon-nitrogen hydrolase; NAD synthase;
pfam_id CN_hydrolase; NAD_synthase;
pfam_target db:Pfam-A.hmm|PF00795.22 evalue:6.4e-24 score:83.9 best_domain_score:83.3 name:CN_hydrolase; db:Pfam-A.hmm|PF02540.17 evalue:3.9e-71 score:238.2 best_domain_score:237.5 name:NAD_synthase;
sprot_desc Glutamine-dependent NAD(+) synthetase;
sprot_id sp|Q03638|NADE_RHOCA;
sprot_target db:uniprot_sprot|sp|Q03638|NADE_RHOCA 1 552 evalue:2.2e-219 qcov:100.00 identity:68.10;
tigrfam_acc TIGR00552;
tigrfam_desc NAD+ synthetase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name nadE;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00552 evalue:8.2e-60 score:201.3 best_domain_score:200.7 name:TIGR00552;
78316 78984 CDS
ID metaerg.pl|08065
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Kandeliimicrobium;s__Kandeliimicrobium roseum;
genomedb_acc GCF_002869745.1;
genomedb_target db:genomedb|GCF_002869745.1|WP_102107019.1 16 220 evalue:2.6e-55 qcov:92.30 identity:56.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF10067;
pfam_desc Predicted membrane protein (DUF2306);
pfam_id DUF2306;
pfam_target db:Pfam-A.hmm|PF10067.9 evalue:5.4e-19 score:68.1 best_domain_score:68.1 name:DUF2306;
tm_num 6;
78316 78984 transmembrane_helix
ID metaerg.pl|08066
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i78334-78402o78490-78558i78592-78660o78688-78741i78778-78846o78904-78957i;
79194 80627 CDS
ID metaerg.pl|08067
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481090.1 18 469 evalue:2.3e-218 qcov:94.80 identity:78.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF02493;
pfam_desc MORN repeat;
pfam_id MORN;
pfam_target db:Pfam-A.hmm|PF02493.20 evalue:3.5e-107 score:343.5 best_domain_score:28.0 name:MORN;
sp YES;
79194 79265 signal_peptide
ID metaerg.pl|08068
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
83220 81400 CDS
ID metaerg.pl|08069
allgo_ids GO:0003924; GO:0005525; GO:0005829; GO:1990904; GO:0006412;
allko_ids K00860; K00956; K00955; K03018; K06207;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798786.1 1 606 evalue:0.0e+00 qcov:100.00 identity:93.70;
kegg_pathway_id 00450; 00920; 00230; 03020;
kegg_pathway_name Selenoamino acid metabolism; Sulfur metabolism; Purine metabolism; RNA polymerase;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00679; PF00009; PF03144; PF01926;
pfam_desc Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; 50S ribosome-binding GTPase;
pfam_id EFG_C; GTP_EFTU; GTP_EFTU_D2; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00679.24 evalue:7.5e-22 score:76.4 best_domain_score:75.4 name:EFG_C; db:Pfam-A.hmm|PF00009.27 evalue:6.7e-57 score:191.4 best_domain_score:190.1 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:2.2e-12 score:46.4 best_domain_score:44.5 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF01926.23 evalue:6e-08 score:32.0 best_domain_score:28.2 name:MMR_HSR1;
sprot_desc GTP-binding protein TypA/BipA homolog;
sprot_id sp|O25225|TYPA_HELPY;
sprot_target db:uniprot_sprot|sp|O25225|TYPA_HELPY 3 603 evalue:2.5e-184 qcov:99.20 identity:53.30;
tigrfam_acc TIGR00231; TIGR01394;
tigrfam_desc small GTP-binding protein domain; GTP-binding protein TypA/BipA;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; TypA_BipA;
tigrfam_sub1role General; Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:1.7e-26 score:92.1 best_domain_score:87.8 name:TIGR00231; db:TIGRFAMs.hmm|TIGR01394 evalue:1.2e-278 score:924.5 best_domain_score:924.3 name:TIGR01394;
84002 83400 CDS
ID metaerg.pl|08070
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469239.1 1 200 evalue:7.4e-78 qcov:100.00 identity:79.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF02588;
pfam_desc Uncharacterised 5xTM membrane BCR, YitT family COG1284;
pfam_id YitT_membrane;
pfam_target db:Pfam-A.hmm|PF02588.15 evalue:2e-28 score:98.4 best_domain_score:98.2 name:YitT_membrane;
tm_num 6;
84002 83400 transmembrane_helix
ID metaerg.pl|08071
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology i83436-83504o83532-83600i83619-83687o83715-83774i83835-83903o83913-83972i;
84329 84006 CDS
ID metaerg.pl|08072
allgo_ids GO:0016021; GO:0005887; GO:0016020; GO:0005886; GO:0015199; GO:0015297; GO:0015220; GO:0042802; GO:0022857; GO:0006974; GO:0015871; GO:0031460; GO:0042493; GO:0006970; GO:0006805;
allko_ids K03297;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798790.1 1 107 evalue:2.1e-39 qcov:100.00 identity:86.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF00893;
pfam_desc Small Multidrug Resistance protein;
pfam_id Multi_Drug_Res;
pfam_target db:Pfam-A.hmm|PF00893.19 evalue:5.2e-29 score:100.0 best_domain_score:99.7 name:Multi_Drug_Res;
sprot_desc Multidrug transporter EmrE;
sprot_id sp|P23895|EMRE_ECOLI;
sprot_target db:uniprot_sprot|sp|P23895|EMRE_ECOLI 3 104 evalue:3.9e-24 qcov:95.30 identity:56.90;
tm_num 3;
84329 84006 transmembrane_helix
ID metaerg.pl|08073
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
topology o84087-84155i84174-84242o84255-84314i;
85071 84346 CDS
ID metaerg.pl|08074
allgo_ids GO:0004222; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798792.1 1 241 evalue:6.6e-89 qcov:100.00 identity:71.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:8.6e-18 score:64.0 best_domain_score:63.3 name:Peptidase_M48;
sp YES;
84346 84402 lipoprotein_signal_peptide
ID metaerg.pl|08075
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
87040 85178 CDS
ID metaerg.pl|08076
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480609.1 1 617 evalue:4.0e-199 qcov:99.50 identity:60.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
sp YES;
85178 85231 signal_peptide
ID metaerg.pl|08077
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
87183 89486 CDS
ID metaerg.pl|08078
allec_ids 5.6.2.3; 5.99.1.-;
allgo_ids GO:0003677; GO:0003916; GO:0005524; GO:0005694; GO:0006265; GO:0019897; GO:0003918; GO:0007059;
allko_ids K02621;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245372.1 1 766 evalue:0.0e+00 qcov:99.90 identity:87.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
pfam_acc PF03989; PF00521;
pfam_desc DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A;
pfam_id DNA_gyraseA_C; DNA_topoisoIV;
pfam_target db:Pfam-A.hmm|PF03989.13 evalue:4.5e-13 score:47.7 best_domain_score:27.0 name:DNA_gyraseA_C; db:Pfam-A.hmm|PF00521.20 evalue:8.2e-137 score:455.8 best_domain_score:455.4 name:DNA_topoisoIV;
sprot_desc DNA topoisomerase 4 subunit A;
sprot_id sp|Q59749|PARC_RHIME;
sprot_target db:uniprot_sprot|sp|Q59749|PARC_RHIME 19 767 evalue:2.6e-247 qcov:97.70 identity:57.10;
tigrfam_acc TIGR01062;
tigrfam_desc DNA topoisomerase IV, A subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name parC_Gneg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01062 evalue:4.2e-246 score:817.7 best_domain_score:553.2 name:TIGR01062;
89556 90251 CDS
ID metaerg.pl|08079
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797175.1 3 204 evalue:8.0e-68 qcov:87.40 identity:68.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
sp YES;
89556 89621 lipoprotein_signal_peptide
ID metaerg.pl|08080
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.30694; 23.2069; 0.235458; 16.3914; 42.1407;
>Feature NODE_54_length_89750_cov_62.2128
1619 1230 CDS
ID metaerg.pl|08081
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198099.1 21 128 evalue:2.0e-36 qcov:83.70 identity:75.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
sp YES;
1230 1370 signal_peptide
ID metaerg.pl|08082
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
3812 1980 CDS
ID metaerg.pl|08083
allgo_ids GO:0003677; GO:0005727; GO:0006310;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094153.1 1 610 evalue:3.6e-293 qcov:100.00 identity:82.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF13154; PF01076; PF13155;
pfam_desc Protein of unknown function (DUF3991); Plasmid recombination enzyme; Toprim-like;
pfam_id DUF3991; Mob_Pre; Toprim_2;
pfam_target db:Pfam-A.hmm|PF13154.6 evalue:4.7e-16 score:58.2 best_domain_score:56.5 name:DUF3991; db:Pfam-A.hmm|PF01076.19 evalue:2.2e-28 score:98.6 best_domain_score:95.9 name:Mob_Pre; db:Pfam-A.hmm|PF13155.6 evalue:2.7e-08 score:33.4 best_domain_score:29.1 name:Toprim_2;
sprot_desc 65 kDa protein;
sprot_id sp|P15255|65KD_ZYMMA;
sprot_target db:uniprot_sprot|sp|P15255|65KD_ZYMMA 1 597 evalue:8.5e-47 qcov:97.90 identity:28.30;
5474 5800 CDS
ID metaerg.pl|08084
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_C;s__Tolypothrix_C sp002218085;
genomedb_acc GCF_002218085.1;
genomedb_target db:genomedb|GCF_002218085.1|WP_089125679.1 1 81 evalue:2.1e-18 qcov:75.00 identity:55.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF13711;
pfam_desc Domain of unknown function (DUF4160);
pfam_id DUF4160;
pfam_target db:Pfam-A.hmm|PF13711.6 evalue:4.8e-12 score:45.3 best_domain_score:44.9 name:DUF4160;
5826 6137 CDS
ID metaerg.pl|08085
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Gallionellaceae;g__Gallionella;s__Gallionella sp003134595;
genomedb_acc GCA_003134595.1;
genomedb_target db:genomedb|GCA_003134595.1|PLBS01000113.1_15 2 97 evalue:8.3e-25 qcov:93.20 identity:61.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF10387;
pfam_desc Protein of unknown function (DUF2442);
pfam_id DUF2442;
pfam_target db:Pfam-A.hmm|PF10387.9 evalue:2.2e-13 score:49.5 best_domain_score:49.0 name:DUF2442;
7091 6171 CDS
ID metaerg.pl|08086
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198099.1 47 306 evalue:8.6e-126 qcov:85.00 identity:88.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
8208 7177 CDS
ID metaerg.pl|08087
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp001712795;
genomedb_acc GCF_001712795.1;
genomedb_target db:genomedb|GCF_001712795.1|WP_069072210.1 1 343 evalue:1.1e-134 qcov:100.00 identity:69.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF16684;
pfam_desc Telomere resolvase;
pfam_id Telomere_res;
pfam_target db:Pfam-A.hmm|PF16684.5 evalue:1.2e-11 score:43.9 best_domain_score:43.6 name:Telomere_res;
10068 9700 CDS
ID metaerg.pl|08088
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
10565 10068 CDS
ID metaerg.pl|08089
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Anabaena_A;s__Anabaena_A cylindrica;
genomedb_acc GCF_000317695.1;
genomedb_target db:genomedb|GCF_000317695.1|WP_015217878.1 10 147 evalue:2.2e-43 qcov:83.60 identity:66.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF13455; PF10544;
pfam_desc Meiotically up-regulated gene 113; T5orf172 domain;
pfam_id MUG113; T5orf172;
pfam_target db:Pfam-A.hmm|PF13455.6 evalue:8e-11 score:41.7 best_domain_score:41.2 name:MUG113; db:Pfam-A.hmm|PF10544.9 evalue:2.5e-10 score:40.1 best_domain_score:39.4 name:T5orf172;
tm_num 1;
10565 10068 transmembrane_helix
ID metaerg.pl|08090
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
topology i10452-10520o;
12623 10569 CDS
ID metaerg.pl|08091
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp002949735;
genomedb_acc GCF_002949735.1;
genomedb_target db:genomedb|GCF_002949735.1|WP_104902475.1 1 627 evalue:1.5e-130 qcov:91.70 identity:42.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
sp YES;
10569 10664 signal_peptide
ID metaerg.pl|08092
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
13282 12623 CDS
ID metaerg.pl|08093
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp002949735;
genomedb_acc GCF_002949735.1;
genomedb_target db:genomedb|GCF_002949735.1|WP_104902476.1 1 219 evalue:9.9e-68 qcov:100.00 identity:64.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
13466 13275 CDS
ID metaerg.pl|08094
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira diplosiphon;
genomedb_acc GCF_002368275.1;
genomedb_target db:genomedb|GCF_002368275.1|WP_045874976.1 3 63 evalue:5.0e-12 qcov:96.80 identity:68.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
13733 13539 CDS
ID metaerg.pl|08095
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094195.1 4 64 evalue:3.6e-10 qcov:95.30 identity:57.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
14161 13883 CDS
ID metaerg.pl|08096
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
14999 14328 CDS
ID metaerg.pl|08097
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp001712795;
genomedb_acc GCF_001712795.1;
genomedb_target db:genomedb|GCF_001712795.1|WP_069068060.1 3 222 evalue:1.5e-39 qcov:98.70 identity:48.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
15366 15004 CDS
ID metaerg.pl|08098
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc commune;
genomedb_acc GCF_003113895.1;
genomedb_target db:genomedb|GCF_003113895.1|WP_109007068.1 1 118 evalue:3.7e-48 qcov:98.30 identity:79.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
15828 16175 CDS
ID metaerg.pl|08099
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Anabaena;s__Anabaena sp000332135;
genomedb_acc GCF_000332135.1;
genomedb_target db:genomedb|GCF_000332135.1|WP_016952440.1 7 115 evalue:3.0e-31 qcov:94.80 identity:62.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
16332 16601 CDS
ID metaerg.pl|08100
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc commune;
genomedb_acc GCF_003113895.1;
genomedb_target db:genomedb|GCF_003113895.1|WP_109013603.1 1 89 evalue:9.1e-28 qcov:100.00 identity:71.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
16686 17408 CDS
ID metaerg.pl|08101
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp002949795;
genomedb_acc GCF_002949795.1;
genomedb_target db:genomedb|GCF_002949795.1|WP_104910306.1 1 240 evalue:2.1e-103 qcov:100.00 identity:78.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
tm_num 1;
16686 17408 transmembrane_helix
ID metaerg.pl|08102
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
topology o16785-16853i;
17720 21169 CDS
ID metaerg.pl|08103
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc commune;
genomedb_acc GCF_003113895.1;
genomedb_target db:genomedb|GCF_003113895.1|WP_109013437.1 106 984 evalue:1.9e-279 qcov:76.50 identity:56.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF08706;
pfam_desc D5 N terminal like;
pfam_id D5_N;
pfam_target db:Pfam-A.hmm|PF08706.11 evalue:5.6e-09 score:35.7 best_domain_score:29.2 name:D5_N;
21754 22818 CDS
ID metaerg.pl|08104
allgo_ids GO:0005524;
allko_ids K00733;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Neosynechococcales;f__Neosynechococcaceae;g__Neosynechococcus;s__Neosynechococcus sphagnicola;
genomedb_acc GCF_000775285.1;
genomedb_target db:genomedb|GCF_000775285.1|WP_036530401.1 1 353 evalue:3.0e-146 qcov:99.70 identity:77.90;
kegg_pathway_id 01030;
kegg_pathway_name Glycan structures - biosynthesis 1;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF00004;
pfam_desc ATPase family associated with various cellular activities (AAA);
pfam_id AAA;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:5e-30 score:103.9 best_domain_score:102.0 name:AAA;
sprot_desc Uncharacterized AAA family ATPase y4kL;
sprot_id sp|P55530|Y4KL_SINFN;
sprot_target db:uniprot_sprot|sp|P55530|Y4KL_SINFN 2 348 evalue:4.8e-42 qcov:98.00 identity:32.60;
22811 25471 CDS
ID metaerg.pl|08105
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Neosynechococcales;f__Neosynechococcaceae;g__Neosynechococcus;s__Neosynechococcus sphagnicola;
genomedb_acc GCF_000775285.1;
genomedb_target db:genomedb|GCF_000775285.1|WP_036530400.1 1 884 evalue:0.0e+00 qcov:99.80 identity:72.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF00082;
pfam_desc Subtilase family;
pfam_id Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:8.7e-28 score:96.6 best_domain_score:96.1 name:Peptidase_S8;
26002 26967 CDS
ID metaerg.pl|08106
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0005737; GO:0007049; GO:0051301; GO:0007059;
allko_ids K03733;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp002896875;
genomedb_acc GCF_002896875.1;
genomedb_target db:genomedb|GCF_002896875.1|WP_103141060.1 1 321 evalue:2.8e-167 qcov:100.00 identity:92.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF00589;
pfam_desc Phage integrase family;
pfam_id Phage_integrase;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:2.1e-21 score:75.7 best_domain_score:74.8 name:Phage_integrase;
sprot_desc Tyrosine recombinase slr0733;
sprot_id sp|P72680|XER_SYNY3;
sprot_target db:uniprot_sprot|sp|P72680|XER_SYNY3 22 321 evalue:2.4e-77 qcov:93.50 identity:49.80;
27703 27248 CDS
ID metaerg.pl|08107
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp002896875;
genomedb_acc GCF_002896875.1;
genomedb_target db:genomedb|GCF_002896875.1|WP_103141076.1 1 151 evalue:1.2e-64 qcov:100.00 identity:88.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
28484 27705 CDS
ID metaerg.pl|08108
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp002896875;
genomedb_acc GCF_002896875.1;
genomedb_target db:genomedb|GCF_002896875.1|WP_103141075.1 1 259 evalue:1.1e-134 qcov:100.00 identity:95.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF13614; PF01656; PF06564; PF09140;
pfam_desc AAA domain; CobQ/CobB/MinD/ParA nucleotide binding domain; Cellulose biosynthesis protein BcsQ; ATPase MipZ;
pfam_id AAA_31; CbiA; CBP_BcsQ; MipZ;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:5.2e-30 score:103.9 best_domain_score:103.5 name:AAA_31; db:Pfam-A.hmm|PF01656.23 evalue:2.6e-12 score:46.2 best_domain_score:45.2 name:CbiA; db:Pfam-A.hmm|PF06564.12 evalue:6.7e-06 score:25.0 best_domain_score:24.5 name:CBP_BcsQ; db:Pfam-A.hmm|PF09140.11 evalue:4.8e-05 score:22.0 best_domain_score:17.7 name:MipZ;
28875 28645 CDS
ID metaerg.pl|08109
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
29347 29604 CDS
ID metaerg.pl|08110
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chroococcidiopsidaceae;g__Chroococcidiopsis;s__Chroococcidiopsis thermalis;
genomedb_acc GCF_000317125.1;
genomedb_target db:genomedb|GCF_000317125.1|WP_041463254.1 7 81 evalue:2.1e-18 qcov:88.20 identity:65.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
29594 30043 CDS
ID metaerg.pl|08111
allgo_ids GO:0000287; GO:0008897;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Coleofasciculaceae;g__Coleofasciculus;s__Coleofasciculus sp000317515;
genomedb_acc GCF_000317515.1;
genomedb_target db:genomedb|GCF_000317515.1|WP_015181769.1 8 145 evalue:1.5e-43 qcov:92.60 identity:62.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF01648;
pfam_desc 4'-phosphopantetheinyl transferase superfamily;
pfam_id ACPS;
pfam_target db:Pfam-A.hmm|PF01648.20 evalue:1.7e-12 score:46.7 best_domain_score:46.4 name:ACPS;
tigrfam_acc TIGR00556;
tigrfam_desc phosphopantetheine--protein transferase domain;
tigrfam_mainrole Protein fate;
tigrfam_name pantethn_trn;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00556 evalue:3.9e-14 score:52.0 best_domain_score:51.8 name:TIGR00556;
30015 31550 CDS
ID metaerg.pl|08112
allec_ids 6.2.1.25;
allgo_ids GO:0003824; GO:0005524; GO:0018858;
allko_ids K01897; K01652; K00666; K01895; K01904; K01909; K01912; K02364; K00992; K01779; K01586; K01913; K05939; K04110; K01776; K03367; K00143;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Coleofasciculaceae;g__Coleofasciculus;s__Coleofasciculus sp000317515;
genomedb_acc GCF_000317515.1;
genomedb_target db:genomedb|GCF_000317515.1|WP_015181770.1 1 508 evalue:1.5e-228 qcov:99.40 identity:74.40;
kegg_pathway_id 00300; 00960; 00640; 00650; 00903; 00620; 00632; 00940; 00720; 00360; 00071; 00660; 00471; 00061; 00252; 00251; 00473; 01053; 00770; 00930; 00290; 00564; 00281; 00010; 00310;
kegg_pathway_name Lysine biosynthesis; Alkaloid biosynthesis II; Propanoate metabolism; Butanoate metabolism; Limonene and pinene degradation; Pyruvate metabolism; Benzoate degradation via CoA ligation; Phenylpropanoid biosynthesis; Reductive carboxylate cycle (CO2 fixation); Phenylalanine metabolism; Fatty acid metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid biosynthesis; Alanine and aspartate metabolism; Glutamate metabolism; D-Alanine metabolism; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Caprolactam degradation; Valine, leucine and isoleucine biosynthesis; Glycerophospholipid metabolism; Geraniol degradation; Glycolysis / Gluconeogenesis; Lysine degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
metacyc_pathway_id BENZCOA-PWY; PWY-13; PWY-5001; PWY-283; PWY-6443;
metacyc_pathway_name anaerobic aromatic compound degradation (Thauera aromatica);; superpathway of tetrahydroxyxanthone biosynthesis;; tetrahydroxyxanthone biosynthesis (from benzoate);; benzoate degradation II (aerobic and anaerobic);; benzoate biosynthesis I (CoA-dependent, β-oxidative);;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; XANTHONE-SYN;; XANTHONE-SYN;; Benzoate-Degradation;; Benzoate-Biosynthesis; Super-Pathways;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:3.6e-88 score:295.2 best_domain_score:295.0 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:1.7e-13 score:50.6 best_domain_score:49.7 name:AMP-binding_C;
sprot_desc Benzoate--CoA ligase;
sprot_id sp|Q8GQN9|BCLA_THAAR;
sprot_target db:uniprot_sprot|sp|Q8GQN9|BCLA_THAAR 7 510 evalue:1.6e-91 qcov:98.60 identity:37.00;
tigrfam_acc TIGR02262;
tigrfam_desc benzoate-CoA ligase family;
tigrfam_name benz_CoA_lig;
tigrfam_target db:TIGRFAMs.hmm|TIGR02262 evalue:1.7e-140 score:468.2 best_domain_score:468.1 name:TIGR02262;
31761 33083 CDS
ID metaerg.pl|08113
allec_ids 5.4.99.5; 5.4.4.2 4.1.3.-;
allgo_ids GO:0004106; GO:0043904; GO:0008909; GO:0000287; GO:0016833; GO:0009697; GO:0019540;
allko_ids K13497; K13950; K01658; K13501; K01657; K03342; K02619; K01664; K01665; K01663; K01656; K04781;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae_A;g__UBA11371;s__UBA11371 sp003486305;
genomedb_acc GCA_003486305.1;
genomedb_target db:genomedb|GCA_003486305.1|HAZ44673.1 1 439 evalue:4.3e-179 qcov:99.80 identity:70.60;
kegg_pathway_id 02020; 00620; 00790; 00400; 01053;
kegg_pathway_name Two-component system - General; Pyruvate metabolism; Folate biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Biosynthesis of siderophore group nonribosomal peptides;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
metacyc_pathway_id PWY-3461; PWY-6120; PHESYN; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY; PWY-3481; PWY-3462; TYRSYN;
metacyc_pathway_name L-tyrosine biosynthesis II;; L-tyrosine biosynthesis III;; L-phenylalanine biosynthesis I;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; L-phenylalanine biosynthesis II;; L-tyrosine biosynthesis I;;
metacyc_pathway_type TYROSINE-SYN;; TYROSINE-SYN;; PHENYLALANINE-SYN;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; PHENYLALANINE-SYN;; TYROSINE-SYN;;
pfam_acc PF00425;
pfam_desc chorismate binding enzyme;
pfam_id Chorismate_bind;
pfam_target db:Pfam-A.hmm|PF00425.18 evalue:8.9e-72 score:241.0 best_domain_score:240.6 name:Chorismate_bind;
sprot_desc Salicylate synthase;
sprot_id sp|Q73XV3|MBTI_MYCPA;
sprot_target db:uniprot_sprot|sp|Q73XV3|MBTI_MYCPA 99 439 evalue:1.3e-52 qcov:77.50 identity:34.40;
tigrfam_acc TIGR03494;
tigrfam_desc salicylate synthase;
tigrfam_name salicyl_syn;
tigrfam_target db:TIGRFAMs.hmm|TIGR03494 evalue:3.2e-98 score:328.5 best_domain_score:328.2 name:TIGR03494;
33108 33497 CDS
ID metaerg.pl|08114
allec_ids 2.7.8.7;
allgo_ids GO:0000287; GO:0008897; GO:0005737; GO:0006633;
allko_ids K00997;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Oscillatoriaceae;g__Oscillatoria;s__Oscillatoria acuminata;
genomedb_acc GCF_000317105.1;
genomedb_target db:genomedb|GCF_000317105.1|WP_015147439.1 4 122 evalue:6.3e-22 qcov:92.20 identity:47.90;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
metacyc_pathway_id PWY-6012;
metacyc_pathway_name acyl carrier protein metabolism;;
metacyc_pathway_type Cofactor-Biosynthesis; Interconversion;;
pfam_acc PF01648;
pfam_desc 4'-phosphopantetheinyl transferase superfamily;
pfam_id ACPS;
pfam_target db:Pfam-A.hmm|PF01648.20 evalue:2.3e-07 score:30.2 best_domain_score:30.0 name:ACPS;
sprot_desc Holo-[acyl-carrier-protein] synthase;
sprot_id sp|Q31HN9|ACPS_HYDCU;
sprot_target db:uniprot_sprot|sp|Q31HN9|ACPS_HYDCU 8 124 evalue:7.3e-09 qcov:90.70 identity:32.50;
tigrfam_acc TIGR00556;
tigrfam_desc phosphopantetheine--protein transferase domain;
tigrfam_mainrole Protein fate;
tigrfam_name pantethn_trn;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00556 evalue:1.4e-14 score:53.4 best_domain_score:53.2 name:TIGR00556;
33641 35167 CDS
ID metaerg.pl|08115
allgo_ids GO:0004315; GO:0006633;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_C;s__Tolypothrix_C sp002218085;
genomedb_acc GCF_002218085.1;
genomedb_target db:genomedb|GCF_002218085.1|WP_089128065.1 1 505 evalue:8.8e-176 qcov:99.40 identity:64.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF08545; PF08541; PF00550; PF00108;
pfam_desc 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; Phosphopantetheine attachment site; Thiolase, N-terminal domain;
pfam_id ACP_syn_III; ACP_syn_III_C; PP-binding; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF08545.10 evalue:2.1e-15 score:55.6 best_domain_score:54.5 name:ACP_syn_III; db:Pfam-A.hmm|PF08541.10 evalue:2.1e-09 score:36.7 best_domain_score:35.2 name:ACP_syn_III_C; db:Pfam-A.hmm|PF00550.25 evalue:5.1e-07 score:29.2 best_domain_score:25.8 name:PP-binding; db:Pfam-A.hmm|PF00108.23 evalue:1.8e-07 score:30.0 best_domain_score:28.4 name:Thiolase_N;
35252 36925 CDS
ID metaerg.pl|08116
allec_ids 1.14.14.-;
allgo_ids GO:0071949; GO:0004497; GO:0017000;
allko_ids K14257;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Rivularia;s__Rivularia parasitica;
genomedb_acc GCF_002368095.1;
genomedb_target db:genomedb|GCF_002368095.1|WP_096657253.1 9 557 evalue:4.4e-197 qcov:98.60 identity:60.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
metacyc_pathway_id PWY-6575; UBISYN-PWY; ALL-CHORISMATE-PWY; PWY-6465; PWY-681; PWY-6468; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY;
metacyc_pathway_name juvenile hormone III biosynthesis I;; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; superpathway of chorismate metabolism;; ; dibenzothiophene desulfurization;; ; 4-hydroxyphenylacetate degradation;;
metacyc_pathway_type HORMONE-SYN; JH-III-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; Super-Pathways;; ; AROMATIC-COMPOUNDS-DEGRADATION;; ; AROMATIC-COMPOUNDS-DEGRADATION;;
pfam_acc PF01494; PF00996; PF13450; PF04820;
pfam_desc FAD binding domain; GDP dissociation inhibitor; NAD(P)-binding Rossmann-like domain; Tryptophan halogenase;
pfam_id FAD_binding_3; GDI; NAD_binding_8; Trp_halogenase;
pfam_target db:Pfam-A.hmm|PF01494.19 evalue:3.2e-06 score:25.8 best_domain_score:24.5 name:FAD_binding_3; db:Pfam-A.hmm|PF00996.18 evalue:5.5e-05 score:21.1 best_domain_score:18.0 name:GDI; db:Pfam-A.hmm|PF13450.6 evalue:8.2e-06 score:25.2 best_domain_score:22.6 name:NAD_binding_8; db:Pfam-A.hmm|PF04820.14 evalue:2e-15 score:55.9 best_domain_score:31.8 name:Trp_halogenase;
sprot_desc Monodechloroaminopyrrolnitrin halogenase PrnC;
sprot_id sp|P95482|PRNC_PSEFL;
sprot_target db:uniprot_sprot|sp|P95482|PRNC_PSEFL 4 495 evalue:6.2e-105 qcov:88.30 identity:40.20;
tm_num 1;
35252 36925 transmembrane_helix
ID metaerg.pl|08117
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
topology i35285-35338o;
36944 40414 CDS
ID metaerg.pl|08118
allec_ids 5.1.1.3;
allgo_ids GO:0003824; GO:0008881; GO:0016874; GO:0031177; GO:0017000;
allko_ids K01776; K00143; K03367; K01586; K05939; K00992; K02364; K01779; K01895; K01909; K01904; K01652; K01897;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Coleofasciculaceae;g__Coleofasciculus;s__Coleofasciculus sp000317515;
genomedb_acc GCF_000317515.1;
genomedb_target db:genomedb|GCF_000317515.1|WP_015181766.1 1 1153 evalue:0.0e+00 qcov:99.70 identity:68.10;
kegg_pathway_id 00010; 00310; 00564; 00290; 00770; 01053; 00473; 00252; 00251; 00660; 00471; 00071; 00720; 00940; 00620; 00640; 00650; 00300;
kegg_pathway_name Glycolysis / Gluconeogenesis; Lysine degradation; Glycerophospholipid metabolism; Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; D-Alanine metabolism; Alanine and aspartate metabolism; Glutamate metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid metabolism; Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis; Pyruvate metabolism; Propanoate metabolism; Butanoate metabolism; Lysine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
metacyc_pathway_id PWY-6471; PWY-6386; PEPTIDOGLYCANSYN-PWY; PWY-6470; PWY-6387; PWY-6385; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00501; PF13193; PF00668; PF00550; PF18563;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain; Condensation domain; Phosphopantetheine attachment site; TubC N-terminal docking domain;
pfam_id AMP-binding; AMP-binding_C; Condensation; PP-binding; TubC_N;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:1.8e-97 score:325.8 best_domain_score:324.8 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:3.4e-13 score:49.6 best_domain_score:48.4 name:AMP-binding_C; db:Pfam-A.hmm|PF00668.20 evalue:9.3e-37 score:126.0 best_domain_score:125.2 name:Condensation; db:Pfam-A.hmm|PF00550.25 evalue:5.4e-08 score:32.3 best_domain_score:25.9 name:PP-binding; db:Pfam-A.hmm|PF18563.1 evalue:6.7e-11 score:41.2 best_domain_score:40.8 name:TubC_N;
sprot_desc Bacitracin synthase 1;
sprot_id sp|O68006|BACA_BACLI;
sprot_target db:uniprot_sprot|sp|O68006|BACA_BACLI 78 1149 evalue:3.5e-203 qcov:92.70 identity:37.80;
tigrfam_acc TIGR01733;
tigrfam_desc amino acid adenylation domain;
tigrfam_name AA-adenyl-dom;
tigrfam_target db:TIGRFAMs.hmm|TIGR01733 evalue:2e-131 score:437.7 best_domain_score:437.2 name:TIGR01733;
40467 46298 CDS
ID metaerg.pl|08119
allgo_ids GO:0008168;
allko_ids K01652; K03367; K00143; K00599; K01779; K02364; K00992;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Scytonema;s__Scytonema hofmannii;
genomedb_acc GCF_000346485.2;
genomedb_target db:genomedb|GCF_000346485.2|WP_081403170.1 31 1931 evalue:0.0e+00 qcov:97.80 identity:57.80;
kegg_pathway_id 00252; 00450; 00473; 00350; 00300; 00340; 00650; 00660; 00290; 00626; 00310; 01053; 00770; 00150; 00380;
kegg_pathway_name Alanine and aspartate metabolism; Selenoamino acid metabolism; D-Alanine metabolism; Tyrosine metabolism; Lysine biosynthesis; Histidine metabolism; Butanoate metabolism; C5-Branched dibasic acid metabolism; Valine, leucine and isoleucine biosynthesis; Naphthalene and anthracene degradation; Lysine degradation; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Androgen and estrogen metabolism; Tryptophan metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF00698; PF00106; PF13561; PF16197; PF00109; PF02801; PF08659; PF08241; PF08242; PF13489; PF13649; PF13847; PF00550;
pfam_desc Acyl transferase domain; short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; Ketoacyl-synthetase C-terminal extension; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; KR domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Phosphopantetheine attachment site;
pfam_id Acyl_transf_1; adh_short; adh_short_C2; KAsynt_C_assoc; ketoacyl-synt; Ketoacyl-synt_C; KR; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; PP-binding;
pfam_target db:Pfam-A.hmm|PF00698.21 evalue:7.9e-49 score:166.1 best_domain_score:165.3 name:Acyl_transf_1; db:Pfam-A.hmm|PF00106.25 evalue:7.9e-12 score:44.3 best_domain_score:38.4 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2e-11 score:43.1 best_domain_score:29.6 name:adh_short_C2; db:Pfam-A.hmm|PF16197.5 evalue:2.5e-21 score:75.5 best_domain_score:73.5 name:KAsynt_C_assoc; db:Pfam-A.hmm|PF00109.26 evalue:4.6e-63 score:212.4 best_domain_score:211.1 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:8.6e-44 score:147.6 best_domain_score:146.1 name:Ketoacyl-synt_C; db:Pfam-A.hmm|PF08659.10 evalue:2.4e-48 score:163.7 best_domain_score:162.7 name:KR; db:Pfam-A.hmm|PF08241.12 evalue:6.8e-10 score:38.7 best_domain_score:37.1 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:4.1e-19 score:68.4 best_domain_score:66.6 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:1.9e-11 score:43.3 best_domain_score:42.0 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:2.7e-12 score:46.5 best_domain_score:44.5 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:2e-10 score:39.9 best_domain_score:37.2 name:Methyltransf_31; db:Pfam-A.hmm|PF00550.25 evalue:1.4e-13 score:50.2 best_domain_score:48.4 name:PP-binding;
46395 47255 CDS
ID metaerg.pl|08120
allec_ids 1.1.1.157;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0008691; GO:0070403; GO:0019605;
allko_ids K13247; K10527; K01825; K07515; K07511; K07514; K15016; K13816; K05556; K01692; K00022; K01782; K07516; K00074;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__HT-58-2;s__HT-58-2 sp002163975;
genomedb_acc GCF_002163975.1;
genomedb_target db:genomedb|GCF_002163975.1|WP_087546239.1 4 286 evalue:1.2e-121 qcov:99.00 identity:77.00;
kegg_pathway_id 00380; 00632; 00930; 00281; 00280; 00310; 00592; 00410; 00071; 01057; 00650; 00640; 00062; 00903; 01040;
kegg_pathway_name Tryptophan metabolism; Benzoate degradation via CoA ligation; Caprolactam degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Biosynthesis of type II polyketide products; Butanoate metabolism; Propanoate metabolism; Fatty acid elongation in mitochondria; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF00725; PF02737; PF03446; PF03721;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; NAD binding domain of 6-phosphogluconate dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain;
pfam_id 3HCDH; 3HCDH_N; NAD_binding_2; UDPG_MGDP_dh_N;
pfam_target db:Pfam-A.hmm|PF00725.22 evalue:5.4e-30 score:103.1 best_domain_score:101.9 name:3HCDH; db:Pfam-A.hmm|PF02737.18 evalue:2.7e-55 score:186.3 best_domain_score:185.9 name:3HCDH_N; db:Pfam-A.hmm|PF03446.15 evalue:2.7e-07 score:30.1 best_domain_score:27.6 name:NAD_binding_2; db:Pfam-A.hmm|PF03721.14 evalue:8e-05 score:21.5 best_domain_score:20.5 name:UDPG_MGDP_dh_N;
sprot_desc 3-hydroxybutyryl-CoA dehydrogenase;
sprot_id sp|P77851|HBD_THETC;
sprot_target db:uniprot_sprot|sp|P77851|HBD_THETC 5 285 evalue:1.1e-60 qcov:98.30 identity:44.10;
47286 47537 CDS
ID metaerg.pl|08121
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae_A;g__UBA11371;s__UBA11371 sp003486305;
genomedb_acc GCA_003486305.1;
genomedb_target db:genomedb|GCA_003486305.1|HAZ44666.1 1 83 evalue:1.1e-22 qcov:100.00 identity:67.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF00550;
pfam_desc Phosphopantetheine attachment site;
pfam_id PP-binding;
pfam_target db:Pfam-A.hmm|PF00550.25 evalue:2.3e-05 score:23.9 best_domain_score:23.7 name:PP-binding;
47761 48927 CDS
ID metaerg.pl|08122
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005739; GO:0003995; GO:0050660; GO:0006635;
allko_ids K08098; K11731; K11538; K00249; K14448; K09478; K00120; K00252; K00232; K06446; K00253; K11410; K00248;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae_A;g__UBA11371;s__UBA11371 sp003486305;
genomedb_acc GCA_003486305.1;
genomedb_target db:genomedb|GCA_003486305.1|HAZ44665.1 1 380 evalue:3.9e-168 qcov:97.90 identity:78.20;
kegg_pathway_id 00361; 00380; 00632; 01040; 00903; 00640; 00650; 00592; 01031; 00280; 00310; 00624; 00626; 00930; 00410; 00071;
kegg_pathway_name gamma-Hexachlorocyclohexane degradation; Tryptophan metabolism; Benzoate degradation via CoA ligation; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Propanoate metabolism; Butanoate metabolism; alpha-Linolenic acid metabolism; Glycan structures - biosynthesis 2; Valine, leucine and isoleucine degradation; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Naphthalene and anthracene degradation; Caprolactam degradation; beta-Alanine metabolism; Fatty acid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
metacyc_pathway_id CARNMET-PWY; PWY-2582; PWY-699; PWY-6544;
metacyc_pathway_name L-carnitine degradation I;; brassinosteroid biosynthesis II;; brassinosteroid biosynthesis I;; superpathway of C28 brassinosteroid biosynthesis;;
metacyc_pathway_type CARN-DEG;; Brassinosteroid-Biosynthesis;; Brassinosteroid-Biosynthesis;; Super-Pathways;;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:3.4e-39 score:133.7 best_domain_score:133.0 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:1.2e-16 score:60.5 best_domain_score:59.6 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:4.1e-20 score:71.0 best_domain_score:69.6 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:9.8e-28 score:96.3 best_domain_score:95.0 name:Acyl-CoA_dh_N;
sprot_desc Acyl-CoA dehydrogenase;
sprot_id sp|P45867|ACDA_BACSU;
sprot_target db:uniprot_sprot|sp|P45867|ACDA_BACSU 1 370 evalue:5.2e-58 qcov:95.40 identity:35.60;
48946 50016 CDS
ID metaerg.pl|08123
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae_A;g__UBA11371;s__UBA11371 sp003486305;
genomedb_acc GCA_003486305.1;
genomedb_target db:genomedb|GCA_003486305.1|HAZ44664.1 1 354 evalue:3.3e-137 qcov:99.40 identity:69.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF13419;
pfam_desc Haloacid dehalogenase-like hydrolase;
pfam_id HAD_2;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:2.2e-05 score:23.9 best_domain_score:23.9 name:HAD_2;
tigrfam_acc TIGR01681; TIGR01686;
tigrfam_desc HAD phosphatase, family IIIC; FkbH domain;
tigrfam_name HAD-SF-IIIC; FkbH;
tigrfam_target db:TIGRFAMs.hmm|TIGR01681 evalue:8.1e-17 score:61.4 best_domain_score:61.4 name:TIGR01681; db:TIGRFAMs.hmm|TIGR01686 evalue:9.1e-80 score:267.3 best_domain_score:267.1 name:TIGR01686;
50036 54640 CDS
ID metaerg.pl|08124
allgo_ids GO:0003824; GO:0016874; GO:0031177; GO:0008152;
allko_ids K01895; K01904; K01909; K13356; K01897; K01652; K01776; K03367; K00143; K00992; K02364; K01779; K01586; K05939; K04784;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_A;s__Tolypothrix_A bouteillei;
genomedb_acc GCF_000760695.2;
genomedb_target db:genomedb|GCF_000760695.2|WP_082051686.1 42 1494 evalue:0.0e+00 qcov:94.70 identity:54.40;
kegg_pathway_id 00720; 00940; 00620; 00640; 00650; 00300; 00310; 00010; 00564; 00290; 01053; 00770; 00473; 00252; 00251; 00660; 00471; 00071;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis; Pyruvate metabolism; Propanoate metabolism; Butanoate metabolism; Lysine biosynthesis; Lysine degradation; Glycolysis / Gluconeogenesis; Glycerophospholipid metabolism; Valine, leucine and isoleucine biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; D-Alanine metabolism; Alanine and aspartate metabolism; Glutamate metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF00501; PF13193; PF00668; PF08241; PF08242; PF13489; PF13649; PF13847; PF00550; PF01209;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain; Condensation domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Phosphopantetheine attachment site; ubiE/COQ5 methyltransferase family;
pfam_id AMP-binding; AMP-binding_C; Condensation; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; PP-binding; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:7.5e-97 score:323.8 best_domain_score:323.2 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:2.8e-13 score:49.9 best_domain_score:24.8 name:AMP-binding_C; db:Pfam-A.hmm|PF00668.20 evalue:5.3e-35 score:120.2 best_domain_score:119.5 name:Condensation; db:Pfam-A.hmm|PF08241.12 evalue:1.3e-07 score:31.4 best_domain_score:29.8 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:9.5e-18 score:64.0 best_domain_score:62.7 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:5.3e-09 score:35.4 best_domain_score:33.9 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:3.7e-09 score:36.4 best_domain_score:35.0 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.3e-09 score:37.3 best_domain_score:36.1 name:Methyltransf_31; db:Pfam-A.hmm|PF00550.25 evalue:1.1e-13 score:50.6 best_domain_score:48.8 name:PP-binding; db:Pfam-A.hmm|PF01209.18 evalue:6.1e-06 score:25.0 best_domain_score:24.1 name:Ubie_methyltran;
sprot_desc High-molecular-weight protein 2;
sprot_id sp|P48633|HMWP2_YERE8;
sprot_target db:uniprot_sprot|sp|P48633|HMWP2_YERE8 47 1490 evalue:4.4e-201 qcov:94.10 identity:34.00;
tigrfam_acc TIGR01733;
tigrfam_desc amino acid adenylation domain;
tigrfam_name AA-adenyl-dom;
tigrfam_target db:TIGRFAMs.hmm|TIGR01733 evalue:6e-128 score:426.3 best_domain_score:425.8 name:TIGR01733;
54650 59236 CDS
ID metaerg.pl|08125
allko_ids K01652; K00143; K00992; K02364; K01779;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Scytonema;s__Scytonema hofmannii;
genomedb_acc GCF_000346485.2;
genomedb_target db:genomedb|GCF_000346485.2|WP_017744613.1 1 1527 evalue:0.0e+00 qcov:99.90 identity:56.10;
kegg_pathway_id 00252; 00300; 00650; 00660; 00290; 00310; 00770; 01053;
kegg_pathway_name Alanine and aspartate metabolism; Lysine biosynthesis; Butanoate metabolism; C5-Branched dibasic acid metabolism; Valine, leucine and isoleucine biosynthesis; Lysine degradation; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF00698; PF00106; PF13561; PF16197; PF00109; PF02801; PF08659; PF00550;
pfam_desc Acyl transferase domain; short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; Ketoacyl-synthetase C-terminal extension; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; KR domain; Phosphopantetheine attachment site;
pfam_id Acyl_transf_1; adh_short; adh_short_C2; KAsynt_C_assoc; ketoacyl-synt; Ketoacyl-synt_C; KR; PP-binding;
pfam_target db:Pfam-A.hmm|PF00698.21 evalue:5.1e-44 score:150.3 best_domain_score:149.7 name:Acyl_transf_1; db:Pfam-A.hmm|PF00106.25 evalue:6e-10 score:38.1 best_domain_score:33.0 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.9e-11 score:42.6 best_domain_score:28.6 name:adh_short_C2; db:Pfam-A.hmm|PF16197.5 evalue:7.4e-20 score:70.7 best_domain_score:69.3 name:KAsynt_C_assoc; db:Pfam-A.hmm|PF00109.26 evalue:6e-74 score:248.0 best_domain_score:247.0 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:9.6e-40 score:134.5 best_domain_score:132.9 name:Ketoacyl-synt_C; db:Pfam-A.hmm|PF08659.10 evalue:4.8e-44 score:149.6 best_domain_score:149.4 name:KR; db:Pfam-A.hmm|PF00550.25 evalue:4.3e-16 score:58.3 best_domain_score:56.9 name:PP-binding;
59233 63396 CDS
ID metaerg.pl|08126
allec_ids 5.1.1.3;
allgo_ids GO:0003824; GO:0008881; GO:0016874; GO:0031177; GO:0017000;
allko_ids K05939; K01586; K01779; K02364; K00992; K00143; K03367; K01776; K01652; K01897; K01909; K01904; K01895;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Coleofasciculaceae;g__Coleofasciculus;s__Coleofasciculus sp000317515;
genomedb_acc GCF_000317515.1;
genomedb_target db:genomedb|GCF_000317515.1|WP_015181760.1 38 1114 evalue:0.0e+00 qcov:77.60 identity:60.40;
kegg_pathway_id 00010; 00310; 00564; 00290; 00770; 01053; 00473; 00251; 00252; 00660; 00471; 00071; 00720; 00940; 00620; 00650; 00640; 00300;
kegg_pathway_name Glycolysis / Gluconeogenesis; Lysine degradation; Glycerophospholipid metabolism; Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; D-Alanine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid metabolism; Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis; Pyruvate metabolism; Butanoate metabolism; Propanoate metabolism; Lysine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
metacyc_pathway_id PWY-6471; PWY-6386; PEPTIDOGLYCANSYN-PWY; PWY-6470; PWY-6385; PWY-5265; PWY-6387;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;;
pfam_acc PF00501; PF13193; PF00668; PF00881; PF00550; PF18563;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain; Condensation domain; Nitroreductase family; Phosphopantetheine attachment site; TubC N-terminal docking domain;
pfam_id AMP-binding; AMP-binding_C; Condensation; Nitroreductase; PP-binding; TubC_N;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:2.5e-92 score:308.9 best_domain_score:308.4 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:6.7e-15 score:55.1 best_domain_score:53.6 name:AMP-binding_C; db:Pfam-A.hmm|PF00668.20 evalue:2.2e-38 score:131.4 best_domain_score:130.6 name:Condensation; db:Pfam-A.hmm|PF00881.24 evalue:1.4e-14 score:53.8 best_domain_score:52.5 name:Nitroreductase; db:Pfam-A.hmm|PF00550.25 evalue:7e-11 score:41.6 best_domain_score:39.6 name:PP-binding; db:Pfam-A.hmm|PF18563.1 evalue:2.1e-18 score:65.3 best_domain_score:63.2 name:TubC_N;
sprot_desc Bacitracin synthase 1;
sprot_id sp|O68006|BACA_BACLI;
sprot_target db:uniprot_sprot|sp|O68006|BACA_BACLI 76 1120 evalue:2.1e-194 qcov:75.30 identity:36.80;
tigrfam_acc TIGR01733; TIGR03605;
tigrfam_desc amino acid adenylation domain; SagB-type dehydrogenase domain;
tigrfam_name AA-adenyl-dom; antibiot_sagB;
tigrfam_target db:TIGRFAMs.hmm|TIGR01733 evalue:4.8e-125 score:416.7 best_domain_score:416.3 name:TIGR01733; db:TIGRFAMs.hmm|TIGR03605 evalue:1e-23 score:82.9 best_domain_score:81.6 name:TIGR03605;
63393 67967 CDS
ID metaerg.pl|08127
allec_ids 5.1.1.-; 1.-.-.-;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0016853; GO:0016874; GO:0016491; GO:0031177; GO:0017000;
allko_ids K01586; K05939; K00992; K02364; K01779; K01776; K00143; K03367; K01652; K13356; K01897; K01895; K01784; K01909; K01904;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Leptolyngbyales;f__Leptolyngbyaceae;g__Leptolyngbya_B;s__Leptolyngbya_B frigida;
genomedb_acc GCF_003003795.1;
genomedb_target db:genomedb|GCF_003003795.1|WP_106258561.1 1 1515 evalue:0.0e+00 qcov:99.40 identity:48.80;
kegg_pathway_id 00620; 00640; 00650; 00300; 00520; 00720; 00940; 00473; 00251; 00252; 00660; 00471; 00052; 00071; 00564; 00010; 00310; 00290; 00770; 01053;
kegg_pathway_name Pyruvate metabolism; Propanoate metabolism; Butanoate metabolism; Lysine biosynthesis; Nucleotide sugars metabolism; Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis; D-Alanine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Galactose metabolism; Fatty acid metabolism; Glycerophospholipid metabolism; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
metacyc_pathway_id PWY-2821; PWY-5826; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987;
metacyc_pathway_name glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;;
metacyc_pathway_type GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;;
pfam_acc PF01073; PF00501; PF13193; PF00668; PF01370; PF07993; PF00550; PF18563;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; AMP-binding enzyme; AMP-binding enzyme C-terminal domain; Condensation domain; NAD dependent epimerase/dehydratase family; Male sterility protein; Phosphopantetheine attachment site; TubC N-terminal docking domain;
pfam_id 3Beta_HSD; AMP-binding; AMP-binding_C; Condensation; Epimerase; NAD_binding_4; PP-binding; TubC_N;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:1.6e-07 score:29.8 best_domain_score:28.1 name:3Beta_HSD; db:Pfam-A.hmm|PF00501.28 evalue:1.1e-95 score:319.9 best_domain_score:319.3 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:4.4e-14 score:52.5 best_domain_score:51.0 name:AMP-binding_C; db:Pfam-A.hmm|PF00668.20 evalue:2.7e-32 score:111.3 best_domain_score:111.3 name:Condensation; db:Pfam-A.hmm|PF01370.21 evalue:6.7e-11 score:41.3 best_domain_score:40.6 name:Epimerase; db:Pfam-A.hmm|PF07993.12 evalue:1.1e-68 score:230.5 best_domain_score:229.7 name:NAD_binding_4; db:Pfam-A.hmm|PF00550.25 evalue:3.6e-13 score:48.9 best_domain_score:47.2 name:PP-binding; db:Pfam-A.hmm|PF18563.1 evalue:1.8e-19 score:68.7 best_domain_score:67.5 name:TubC_N;
sprot_desc Linear gramicidin synthase subunit D;
sprot_id sp|Q70LM4|LGRD_BREPA;
sprot_target db:uniprot_sprot|sp|Q70LM4|LGRD_BREPA 49 1515 evalue:4.8e-208 qcov:96.30 identity:32.80;
tigrfam_acc TIGR01733; TIGR01746;
tigrfam_desc amino acid adenylation domain; thioester reductase domain;
tigrfam_name AA-adenyl-dom; Thioester-redct;
tigrfam_target db:TIGRFAMs.hmm|TIGR01733 evalue:1.7e-124 score:414.9 best_domain_score:414.4 name:TIGR01733; db:TIGRFAMs.hmm|TIGR01746 evalue:2.7e-105 score:351.8 best_domain_score:351.3 name:TIGR01746;
68056 70734 CDS
ID metaerg.pl|08128
allgo_ids GO:0009279; GO:0016021; GO:0005506; GO:0038023; GO:0055072; GO:0015891;
allko_ids K15721;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Rivularia;s__Rivularia parasitica;
genomedb_acc GCF_002368095.1;
genomedb_target db:genomedb|GCF_002368095.1|WP_096654118.1 80 892 evalue:1.4e-240 qcov:91.10 identity:51.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF11741; PF07715; PF00593;
pfam_desc AMIN domain; TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id AMIN; Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF11741.8 evalue:4.3e-18 score:64.5 best_domain_score:62.8 name:AMIN; db:Pfam-A.hmm|PF07715.15 evalue:2.2e-20 score:72.5 best_domain_score:72.5 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:2.4e-43 score:148.9 best_domain_score:144.7 name:TonB_dep_Rec;
sp YES;
sprot_desc Pesticin receptor;
sprot_id sp|P46359|FYUA_YERPE;
sprot_target db:uniprot_sprot|sp|P46359|FYUA_YERPE 216 865 evalue:2.7e-33 qcov:72.90 identity:24.00;
68056 68169 signal_peptide
ID metaerg.pl|08129
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
70751 72049 CDS
ID metaerg.pl|08130
allgo_ids GO:0008521; GO:0016021; GO:0005886; GO:0015293; GO:0071555;
allko_ids K08217; K08219; K08218;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Cylindrospermum;s__Cylindrospermum stagnale;
genomedb_acc GCF_000317535.1;
genomedb_target db:genomedb|GCF_000317535.1|WP_085960788.1 22 417 evalue:1.8e-121 qcov:91.70 identity:61.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF13000; PF03092; PF07690; PF13347; PF03209;
pfam_desc Acetyl-coenzyme A transporter 1; BT1 family; Major Facilitator Superfamily; MFS/sugar transport protein; PUCC protein;
pfam_id Acatn; BT1; MFS_1; MFS_2; PUCC;
pfam_target db:Pfam-A.hmm|PF13000.7 evalue:1.3e-17 score:62.7 best_domain_score:45.5 name:Acatn; db:Pfam-A.hmm|PF03092.16 evalue:2.8e-06 score:25.1 best_domain_score:20.3 name:BT1; db:Pfam-A.hmm|PF07690.16 evalue:6.5e-34 score:116.6 best_domain_score:97.5 name:MFS_1; db:Pfam-A.hmm|PF13347.6 evalue:2.8e-09 score:35.3 best_domain_score:35.3 name:MFS_2; db:Pfam-A.hmm|PF03209.15 evalue:4e-06 score:25.3 best_domain_score:21.9 name:PUCC;
sprot_desc Anhydromuropeptide permease;
sprot_id sp|P0AE17|AMPG_ECO57;
sprot_target db:uniprot_sprot|sp|P0AE17|AMPG_ECO57 37 412 evalue:8.4e-25 qcov:87.00 identity:26.70;
tm_num 11;
70751 72049 transmembrane_helix
ID metaerg.pl|08131
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
topology o70838-70906i70940-70999o71027-71095i71108-71176o71300-71368i71471-71530o71573-71641i71660-71728o71741-71809i71867-71920o71930-71998i;
72352 74115 CDS
ID metaerg.pl|08132
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016021; GO:0005886; GO:0016887; GO:0042626; GO:0016491;
allko_ids K10111; K01995; K05816; K02023; K02000; K02052; K02006; K05847; K02010; K01996; K02071; K06861; K02045; K11072;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae_A;g__UBA11371;s__UBA11371 sp003486305;
genomedb_acc GCA_003486305.1;
genomedb_target db:genomedb|GCA_003486305.1|HAZ44682.1 1 585 evalue:3.1e-233 qcov:99.70 identity:69.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
metacyc_pathway_id PWY-6171; PWY-6135; PWY-6166; PWY-6188; PWYG-321; PWY-6113;
metacyc_pathway_name ; ; ; ; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00004; PF00664; PF00005;
pfam_desc ATPase family associated with various cellular activities (AAA); ABC transporter transmembrane region; ABC transporter;
pfam_id AAA; ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:7.9e-06 score:25.6 best_domain_score:22.5 name:AAA; db:Pfam-A.hmm|PF00664.23 evalue:7.6e-19 score:67.6 best_domain_score:66.8 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:4.7e-29 score:100.9 best_domain_score:100.1 name:ABC_tran;
sprot_desc Iron import ATP-binding/permease protein IrtA;
sprot_id sp|P63392|IRTA_MYCBO;
sprot_target db:uniprot_sprot|sp|P63392|IRTA_MYCBO 12 568 evalue:8.1e-71 qcov:94.90 identity:32.10;
tm_num 6;
72352 74115 transmembrane_helix
ID metaerg.pl|08133
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
topology o72430-72498i72517-72585o72754-72822i72835-72891o73090-73158i73162-73230o;
74128 75879 CDS
ID metaerg.pl|08134
allec_ids 7.5.2.6;
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887; GO:0034040;
allko_ids K02045; K11072; K01996; K02071; K06861; K02017; K02006; K02052; K05847; K02010; K02000; K02023; K05816; K10111; K01995; K11085;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae_A;g__UBA11371;s__UBA11371 sp003486305;
genomedb_acc GCA_003486305.1;
genomedb_target db:genomedb|GCA_003486305.1|HAZ44683.1 1 579 evalue:3.8e-239 qcov:99.30 identity:74.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:5.7e-33 score:114.0 best_domain_score:113.4 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:1.2e-31 score:109.3 best_domain_score:108.3 name:ABC_tran;
sprot_desc Lipid A export ATP-binding/permease protein MsbA;
sprot_id sp|Q2LVL0|MSBA_SYNAS;
sprot_target db:uniprot_sprot|sp|Q2LVL0|MSBA_SYNAS 1 561 evalue:2.8e-76 qcov:96.20 identity:33.70;
tm_num 6;
74128 75879 transmembrane_helix
ID metaerg.pl|08135
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
topology i74188-74247o74290-74358i74518-74586o74596-74649i74839-74907o74935-75003i;
76221 77594 CDS
ID metaerg.pl|08136
allec_ids 1.14.-.-;
allgo_ids GO:0005506; GO:0016705; GO:0020037; GO:0055114; GO:0004497; GO:0009399;
allko_ids K00517; K23139;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae;g__Kamptonema;s__Kamptonema formosum;
genomedb_acc GCF_000332155.1;
genomedb_target db:genomedb|GCF_000332155.1|WP_007354144.1 1 457 evalue:2.0e-142 qcov:100.00 identity:55.80;
kegg_pathway_id 00903; 00626; 00361; 00940;
kegg_pathway_name Limonene and pinene degradation; Naphthalene and anthracene degradation; gamma-Hexachlorocyclohexane degradation; Phenylpropanoid biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
metacyc_pathway_id PWY-5479; PWY-1381; PWY-2961; PWY-6544; P481-PWY; PWY-6494; FLUORENE-DEG-9-ONE-PWY; PWY-2582; PWY-6442; PWY-699;
metacyc_pathway_name 6-methoxypodophyllotoxin biosynthesis;; fluorene degradation II;; sesquiterpenoid phytoalexins biosynthesis;; superpathway of C28 brassinosteroid biosynthesis;; adamantanone degradation;; gibberellin inactivation III (epoxidation);; fluorene degradation I;; brassinosteroid biosynthesis II;; spermidine hydroxycinnamic acid conjugates biosynthesis;; brassinosteroid biosynthesis I;;
metacyc_pathway_type LIGNAN-SYN;; Fluorene-Degradation;; SESQUITERPENOID-SYN; TERPENOID-PHYTOALEXINS;; Super-Pathways;; Other-Degradation;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Fluorene-Degradation;; Brassinosteroid-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Brassinosteroid-Biosynthesis;;
pfam_acc PF00067;
pfam_desc Cytochrome P450;
pfam_id p450;
pfam_target db:Pfam-A.hmm|PF00067.22 evalue:7.5e-74 score:248.4 best_domain_score:248.2 name:p450;
sprot_desc Probable cytochrome P450 110;
sprot_id sp|P29980|CPXN_NOSS1;
sprot_target db:uniprot_sprot|sp|P29980|CPXN_NOSS1 2 443 evalue:5.8e-101 qcov:96.70 identity:42.00;
77701 78570 CDS
ID metaerg.pl|08137
allec_ids 2.1.1.307;
allgo_ids GO:0046872; GO:0008168; GO:0017000; GO:0032259;
allko_ids K19569;
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales;f__UBA10450;g__AV55;s__AV55 sp003220005;
genomedb_acc GCA_003220005.1;
genomedb_target db:genomedb|GCA_003220005.1|PYL63061.1 20 287 evalue:4.1e-77 qcov:92.70 identity:54.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF13578; PF05711;
pfam_desc Methyltransferase domain; Macrocin-O-methyltransferase (TylF);
pfam_id Methyltransf_24; TylF;
pfam_target db:Pfam-A.hmm|PF13578.6 evalue:7e-10 score:39.1 best_domain_score:38.5 name:Methyltransf_24; db:Pfam-A.hmm|PF05711.11 evalue:2.4e-95 score:317.9 best_domain_score:317.7 name:TylF;
sprot_desc 8-demethyl-8-(2,3-dimethoxy-alpha-L-rhamnosyl)-tetracenomycin-C 4'-O-methyltransferase;
sprot_id sp|Q9AJU0|ELMM3_STROV;
sprot_target db:uniprot_sprot|sp|Q9AJU0|ELMM3_STROV 19 288 evalue:8.6e-66 qcov:93.40 identity:48.00;
79105 79878 CDS
ID metaerg.pl|08138
allec_ids 1.1.-.-;
allgo_ids GO:0009058; GO:0016788; GO:0016491; GO:0017000;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chroococcidiopsidaceae;g__Chroococcidiopsis;s__Chroococcidiopsis thermalis;
genomedb_acc GCF_000317125.1;
genomedb_target db:genomedb|GCF_000317125.1|WP_015155656.1 3 246 evalue:1.4e-73 qcov:94.90 identity:56.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
metacyc_pathway_id GAMMAHEXCHLORDEG-PWY;
metacyc_pathway_name γ-hexachlorocyclohexane degradation;;
metacyc_pathway_type CHLORINATED-COMPOUNDS-DEG;;
pfam_acc PF00975;
pfam_desc Thioesterase domain;
pfam_id Thioesterase;
pfam_target db:Pfam-A.hmm|PF00975.20 evalue:9e-44 score:149.5 best_domain_score:149.4 name:Thioesterase;
sprot_desc Linear gramicidin dehydrogenase LgrE;
sprot_id sp|Q70LM8|LGRE_BREPA;
sprot_target db:uniprot_sprot|sp|Q70LM8|LGRE_BREPA 2 246 evalue:7.7e-58 qcov:95.30 identity:42.60;
80504 81016 CDS
ID metaerg.pl|08139
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp000009705;
genomedb_acc GCF_000009705.1;
genomedb_target db:genomedb|GCF_000009705.1|WP_010999753.1 1 168 evalue:1.9e-26 qcov:98.80 identity:45.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
81543 82574 CDS
ID metaerg.pl|08140
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp001712795;
genomedb_acc GCF_001712795.1;
genomedb_target db:genomedb|GCF_001712795.1|WP_069072210.1 1 343 evalue:1.1e-134 qcov:100.00 identity:69.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF16684;
pfam_desc Telomere resolvase;
pfam_id Telomere_res;
pfam_target db:Pfam-A.hmm|PF16684.5 evalue:1.2e-11 score:43.9 best_domain_score:43.6 name:Telomere_res;
82660 83580 CDS
ID metaerg.pl|08141
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198099.1 47 306 evalue:8.6e-126 qcov:85.00 identity:88.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
83925 83614 CDS
ID metaerg.pl|08142
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Gallionellaceae;g__Gallionella;s__Gallionella sp003134595;
genomedb_acc GCA_003134595.1;
genomedb_target db:genomedb|GCA_003134595.1|PLBS01000113.1_15 2 97 evalue:8.3e-25 qcov:93.20 identity:61.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF10387;
pfam_desc Protein of unknown function (DUF2442);
pfam_id DUF2442;
pfam_target db:Pfam-A.hmm|PF10387.9 evalue:2.2e-13 score:49.5 best_domain_score:49.0 name:DUF2442;
84277 83951 CDS
ID metaerg.pl|08143
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_C;s__Tolypothrix_C sp002218085;
genomedb_acc GCF_002218085.1;
genomedb_target db:genomedb|GCF_002218085.1|WP_089125679.1 1 81 evalue:2.1e-18 qcov:75.00 identity:55.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF13711;
pfam_desc Domain of unknown function (DUF4160);
pfam_id DUF4160;
pfam_target db:Pfam-A.hmm|PF13711.6 evalue:4.8e-12 score:45.3 best_domain_score:44.9 name:DUF4160;
85939 87771 CDS
ID metaerg.pl|08144
allgo_ids GO:0003677; GO:0005727; GO:0006310;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094153.1 1 610 evalue:3.6e-293 qcov:100.00 identity:82.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
pfam_acc PF13154; PF01076; PF13155;
pfam_desc Protein of unknown function (DUF3991); Plasmid recombination enzyme; Toprim-like;
pfam_id DUF3991; Mob_Pre; Toprim_2;
pfam_target db:Pfam-A.hmm|PF13154.6 evalue:4.7e-16 score:58.2 best_domain_score:56.5 name:DUF3991; db:Pfam-A.hmm|PF01076.19 evalue:2.2e-28 score:98.6 best_domain_score:95.9 name:Mob_Pre; db:Pfam-A.hmm|PF13155.6 evalue:2.7e-08 score:33.4 best_domain_score:29.1 name:Toprim_2;
sprot_desc 65 kDa protein;
sprot_id sp|P15255|65KD_ZYMMA;
sprot_target db:uniprot_sprot|sp|P15255|65KD_ZYMMA 1 597 evalue:8.5e-47 qcov:97.90 identity:28.30;
88132 88521 CDS
ID metaerg.pl|08145
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198099.1 21 128 evalue:2.0e-36 qcov:83.70 identity:75.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
sp YES;
88132 88272 signal_peptide
ID metaerg.pl|08146
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0228348; 0.00327009; 92.8924; 0.0355692; 92.9541;
>Feature NODE_55_length_88624_cov_53.9337
240 1430 CDS
ID metaerg.pl|08147
allgo_ids GO:0055085; GO:0030288;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW12499.1 16 389 evalue:3.2e-141 qcov:94.40 identity:67.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:7.8e-85 score:283.9 best_domain_score:283.6 name:DctP;
sp YES;
sprot_desc Solute-binding protein Veis_3954;
sprot_id sp|A1WPV4|DCTP_VEREI;
sprot_target db:uniprot_sprot|sp|A1WPV4|DCTP_VEREI 94 389 evalue:1.8e-45 qcov:74.70 identity:34.80;
tigrfam_acc TIGR00787;
tigrfam_desc TRAP transporter solute receptor, DctP family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctP;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00787 evalue:3.9e-75 score:251.7 best_domain_score:251.4 name:TIGR00787;
240 320 lipoprotein_signal_peptide
ID metaerg.pl|08148
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
1509 2153 CDS
ID metaerg.pl|08149
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW12500.1 45 213 evalue:2.8e-30 qcov:79.00 identity:43.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:2.3e-30 score:104.4 best_domain_score:104.4 name:DctQ;
tm_num 4;
1509 2153 transmembrane_helix
ID metaerg.pl|08150
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
topology i1719-1787o1830-1883i1941-2009o2052-2120i;
2157 3416 CDS
ID metaerg.pl|08151
allgo_ids GO:0016021; GO:0005886; GO:0022857;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW12501.1 1 418 evalue:1.2e-138 qcov:99.80 identity:64.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:3.4e-103 score:344.9 best_domain_score:344.6 name:DctM;
sprot_desc hypothetical protein;
sprot_id sp|P40800|YGIK_SALTY;
sprot_target db:uniprot_sprot|sp|P40800|YGIK_SALTY 1 418 evalue:7.3e-74 qcov:99.80 identity:40.80;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:2.2e-123 score:411.2 best_domain_score:411.0 name:TIGR00786;
tm_num 12;
2157 3416 transmembrane_helix
ID metaerg.pl|08152
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
topology o2214-2282i2316-2375o2403-2471i2565-2633o2661-2729i2766-2834o2847-2915i2976-3044o3087-3140i3153-3221o3234-3302i3339-3407o;
3413 4423 CDS
ID metaerg.pl|08153
allec_ids 2.7.1.45;
allgo_ids GO:0008673; GO:0005524; GO:0000166; GO:0016310;
allko_ids K00874;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus poikilotrophus;
genomedb_acc GCF_900111455.1;
genomedb_target db:genomedb|GCF_900111455.1|WP_091438396.1 25 336 evalue:5.1e-79 qcov:92.90 identity:55.80;
kegg_pathway_id 00040; 00030;
kegg_pathway_name Pentose and glucuronate interconversions; Pentose phosphate pathway;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
metacyc_pathway_id PWY-6516; PWY-2221; PWY-6507;
metacyc_pathway_name superpathway of microbial D-galacturonate and D-glucuronate degradation;; Entner-Doudoroff pathway III (semi-phosphorylative);; 4-deoxy-L-threo-hex-4-enopyranuronate degradation;;
metacyc_pathway_type Sugar-Derivatives; Super-Pathways;; Entner-Duodoroff-Pathways;; Sugar-Derivatives;;
pfam_acc PF00294;
pfam_desc pfkB family carbohydrate kinase;
pfam_id PfkB;
pfam_target db:Pfam-A.hmm|PF00294.24 evalue:4.9e-49 score:166.5 best_domain_score:166.2 name:PfkB;
sprot_desc 2-dehydro-3-deoxygluconokinase;
sprot_id sp|Q53W83|KDGK_THET8;
sprot_target db:uniprot_sprot|sp|Q53W83|KDGK_THET8 22 336 evalue:1.2e-55 qcov:93.80 identity:44.30;
4420 5277 CDS
ID metaerg.pl|08154
allec_ids 4.-.-.-;
allgo_ids GO:0016829; GO:0005737;
allko_ids K01714;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus sabuli;
genomedb_acc GCF_900215145.1;
genomedb_target db:genomedb|GCF_900215145.1|WP_097208519.1 6 281 evalue:2.3e-80 qcov:96.80 identity:58.30;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
metacyc_pathway_id PWY1A0-6325;
metacyc_pathway_name actinorhodin biosynthesis;;
metacyc_pathway_type Antibiotic-Biosynthesis;;
pfam_acc PF00701;
pfam_desc Dihydrodipicolinate synthetase family;
pfam_id DHDPS;
pfam_target db:Pfam-A.hmm|PF00701.22 evalue:1.6e-37 score:128.1 best_domain_score:127.8 name:DHDPS;
sprot_desc Uncharacterized DapA-like lyase Caur_1967;
sprot_id sp|A9WE23|DAPAL_CHLAA;
sprot_target db:uniprot_sprot|sp|A9WE23|DAPAL_CHLAA 1 281 evalue:5.7e-22 qcov:98.60 identity:28.70;
5467 7077 CDS
ID metaerg.pl|08155
allec_ids 1.2.1.26;
allgo_ids GO:0016491; GO:0055114; GO:0047533; GO:0042838; GO:0046392;
allko_ids K00128; K00206; K00146; K00155; K14519;
genomedb_OC d__Bacteria;p__Dormibacterota;c__Dormibacteria;o__Dormibacterales;f__Dormibacteraceae;g__UBA4736;s__UBA4736 sp002404015;
genomedb_acc GCA_002404015.1;
genomedb_target db:genomedb|GCA_002404015.1|DHIW01000008.1_1 26 528 evalue:2.6e-138 qcov:93.80 identity:55.80;
kegg_pathway_id 00410; 00631; 00360; 00340; 00071; 00626; 00281; 00280; 00624; 00310; 00010; 00351; 00643; 00640; 00650; 00903; 00220; 00620; 00561; 00380; 00120; 00641;
kegg_pathway_name beta-Alanine metabolism; 1,2-Dichloroethane degradation; Phenylalanine metabolism; Histidine metabolism; Fatty acid metabolism; Naphthalene and anthracene degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; 1- and 2-Methylnaphthalene degradation; Lysine degradation; Glycolysis / Gluconeogenesis; 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation; Styrene degradation; Propanoate metabolism; Butanoate metabolism; Limonene and pinene degradation; Urea cycle and metabolism of amino groups; Pyruvate metabolism; Glycerolipid metabolism; Tryptophan metabolism; Bile acid biosynthesis; 3-Chloroacrylic acid degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
metacyc_pathway_id PWY-6516;
metacyc_pathway_name superpathway of microbial D-galacturonate and D-glucuronate degradation;;
metacyc_pathway_type Sugar-Derivatives; Super-Pathways;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:2e-48 score:164.3 best_domain_score:163.9 name:Aldedh;
sprot_desc Alpha-ketoglutaric semialdehyde dehydrogenase 2;
sprot_id sp|Q08IC0|KGSD2_AZOBR;
sprot_target db:uniprot_sprot|sp|Q08IC0|KGSD2_AZOBR 9 525 evalue:4.9e-99 qcov:96.50 identity:45.90;
7079 7768 CDS
ID metaerg.pl|08156
allgo_ids GO:0016829;
allko_ids K01625;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__SBR1031;f__A4b;g__GCA-2699585;s__GCA-2699585 sp002699585;
genomedb_acc GCA_002699585.1;
genomedb_target db:genomedb|GCA_002699585.1|MAU13346.1 1 218 evalue:1.2e-60 qcov:95.20 identity:53.70;
kegg_pathway_id 00040; 00030; 00330;
kegg_pathway_name Pentose and glucuronate interconversions; Pentose phosphate pathway; Arginine and proline metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF01081;
pfam_desc KDPG and KHG aldolase;
pfam_id Aldolase;
pfam_target db:Pfam-A.hmm|PF01081.19 evalue:3.2e-35 score:120.6 best_domain_score:120.3 name:Aldolase;
7768 8868 CDS
ID metaerg.pl|08157
allko_ids K00874;
genomedb_OC d__Bacteria;p__Planctomycetota;c__UBA8108;o__UBA8108;f__UBA8108;g__UBA8108;s__UBA8108 sp002708465;
genomedb_acc GCA_002708465.1;
genomedb_target db:genomedb|GCA_002708465.1|MBA19932.1 1 366 evalue:1.6e-134 qcov:100.00 identity:64.50;
kegg_pathway_id 00040; 00030;
kegg_pathway_name Pentose and glucuronate interconversions; Pentose phosphate pathway;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF00294;
pfam_desc pfkB family carbohydrate kinase;
pfam_id PfkB;
pfam_target db:Pfam-A.hmm|PF00294.24 evalue:3.8e-23 score:81.5 best_domain_score:77.1 name:PfkB;
8985 10769 CDS
ID metaerg.pl|08158
allec_ids 4.2.1.-;
allgo_ids GO:0003824; GO:0051536; GO:0016829; GO:0046872;
allko_ids K01687; K22216;
genomedb_OC d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Sorangium;s__Sorangium cellulosum_B;
genomedb_acc GCF_000067165.1;
genomedb_target db:genomedb|GCF_000067165.1|WP_012234162.1 9 594 evalue:6.1e-253 qcov:98.70 identity:73.00;
kegg_pathway_id 00770; 00290;
kegg_pathway_name Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
metacyc_pathway_id PWY-5061; FASYN-ELONG-PWY; PWY-6007; BENZCOA-PWY; PWY-5184; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; CARNMET-PWY; PWY0-881; PWY1A0-6325; PWYG-321; PWY-6113; CENTBENZCOA-PWY; PWY-5367;
metacyc_pathway_name 6,7,4'-trihydroxyisoflavone biosynthesis;; fatty acid elongation -- saturated;; (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis II;; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; 4-hydroxyphenylacetate degradation;; L-carnitine degradation I;; superpathway of fatty acid biosynthesis I (E. coli);; actinorhodin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; benzoyl-CoA degradation II (anaerobic);; petroselinate biosynthesis;;
metacyc_pathway_type ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis;; DMNT-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION;; CARN-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; Antibiotic-Biosynthesis;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Benzoyl-CoA-Degradation;; Unsaturated-Fatty-Acids-Biosynthesis;;
pfam_acc PF00920;
pfam_desc Dehydratase family;
pfam_id ILVD_EDD;
pfam_target db:Pfam-A.hmm|PF00920.21 evalue:4e-156 score:519.9 best_domain_score:519.7 name:ILVD_EDD;
sprot_desc Putative dehydratase IlvD1;
sprot_id sp|Q92RP0|ILVD1_RHIME;
sprot_target db:uniprot_sprot|sp|Q92RP0|ILVD1_RHIME 9 594 evalue:1.7e-116 qcov:98.70 identity:41.90;
11027 12001 CDS
ID metaerg.pl|08159
casgene_acc COG2378_WYL_CAS-I:CAS-III; pfam13280_WYL_CAS-I:CAS-III;
casgene_name WYL; WYL;
casgene_target db:casgenes.hmm|COG2378_WYL_CAS-I:CAS-III evalue:2.1e-56 score:190.9 best_domain_score:190.6 name:WYL; db:casgenes.hmm|pfam13280_WYL_CAS-I:CAS-III evalue:7.7e-26 score:90.4 best_domain_score:89.8 name:WYL;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664617.1 1 318 evalue:4.8e-111 qcov:98.10 identity:68.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF08279; PF02082; PF13280;
pfam_desc HTH domain; Transcriptional regulator; WYL domain;
pfam_id HTH_11; Rrf2; WYL;
pfam_target db:Pfam-A.hmm|PF08279.12 evalue:1.6e-13 score:49.6 best_domain_score:48.8 name:HTH_11; db:Pfam-A.hmm|PF02082.20 evalue:1.3e-05 score:24.7 best_domain_score:23.3 name:Rrf2; db:Pfam-A.hmm|PF13280.6 evalue:2.6e-25 score:88.7 best_domain_score:87.6 name:WYL;
12123 13781 CDS
ID metaerg.pl|08160
allgo_ids GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinomycetospora;s__Actinomycetospora cinnamomea;
genomedb_acc GCA_003096675.1;
genomedb_target db:genomedb|GCA_003096675.1|PVZ05001.1 6 540 evalue:1.1e-120 qcov:96.90 identity:49.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF00196; PF13424;
pfam_desc Bacterial regulatory proteins, luxR family; Tetratricopeptide repeat;
pfam_id GerE; TPR_12;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:1.6e-18 score:65.2 best_domain_score:64.2 name:GerE; db:Pfam-A.hmm|PF13424.6 evalue:5.5e-10 score:38.6 best_domain_score:23.5 name:TPR_12;
13839 15011 CDS
ID metaerg.pl|08161
allgo_ids GO:0008168;
allko_ids K00568; K00599;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus poikilotrophus;
genomedb_acc GCF_900111455.1;
genomedb_target db:genomedb|GCF_900111455.1|WP_091438979.1 35 387 evalue:7.6e-127 qcov:90.50 identity:66.30;
kegg_pathway_id 00450; 00626; 00380; 00340; 00150; 00350; 00130;
kegg_pathway_name Selenoamino acid metabolism; Naphthalene and anthracene degradation; Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism; Tyrosine metabolism; Ubiquinone biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF02353; PF08241; PF08242; PF00891; PF13489; PF13649; PF13847; PF02390; PF05175; PF01135; PF01209;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; O-methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Putative methyltransferase ; Methyltransferase small domain; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); ubiE/COQ5 methyltransferase family;
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_2; Methyltransf_23; Methyltransf_25; Methyltransf_31; Methyltransf_4; MTS; PCMT; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:5.3e-06 score:25.1 best_domain_score:24.2 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:1.8e-15 score:56.6 best_domain_score:54.9 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:4.8e-16 score:58.6 best_domain_score:57.7 name:Methyltransf_12; db:Pfam-A.hmm|PF00891.18 evalue:6.4e-07 score:28.1 best_domain_score:27.5 name:Methyltransf_2; db:Pfam-A.hmm|PF13489.6 evalue:3.2e-14 score:52.3 best_domain_score:51.9 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:5.8e-18 score:64.6 best_domain_score:63.0 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.4e-26 score:92.4 best_domain_score:91.8 name:Methyltransf_31; db:Pfam-A.hmm|PF02390.17 evalue:0.00012 score:20.8 best_domain_score:19.3 name:Methyltransf_4; db:Pfam-A.hmm|PF05175.14 evalue:7.6e-10 score:37.8 best_domain_score:37.1 name:MTS; db:Pfam-A.hmm|PF01135.19 evalue:7.1e-06 score:25.1 best_domain_score:24.3 name:PCMT; db:Pfam-A.hmm|PF01209.18 evalue:5.8e-09 score:34.9 best_domain_score:34.1 name:Ubie_methyltran;
15216 15623 CDS
ID metaerg.pl|08162
allko_ids K00457;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora echinaurantiaca;
genomedb_acc GCF_900090235.1;
genomedb_target db:genomedb|GCF_900090235.1|WP_088995348.1 1 134 evalue:3.5e-55 qcov:99.30 identity:79.10;
kegg_pathway_id 00360; 00350;
kegg_pathway_name Phenylalanine metabolism; Tyrosine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF00903;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:2.2e-10 score:40.0 best_domain_score:39.5 name:Glyoxalase;
15629 16348 CDS
ID metaerg.pl|08163
allko_ids K01249;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinoalloteichus;s__Actinoalloteichus cyanogriseus;
genomedb_acc GCF_000429185.1;
genomedb_target db:genomedb|GCF_000429185.1|WP_026420239.1 1 238 evalue:2.0e-82 qcov:99.60 identity:66.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF08713;
pfam_desc DNA alkylation repair enzyme;
pfam_id DNA_alkylation;
pfam_target db:Pfam-A.hmm|PF08713.11 evalue:1.7e-57 score:193.8 best_domain_score:193.6 name:DNA_alkylation;
16750 16394 CDS
ID metaerg.pl|08164
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667484.1 2 118 evalue:6.9e-07 qcov:99.20 identity:40.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
17694 16936 CDS
ID metaerg.pl|08165
allgo_ids GO:0006353;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666833.1 26 252 evalue:2.2e-26 qcov:90.10 identity:43.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF07498;
pfam_desc Rho termination factor, N-terminal domain;
pfam_id Rho_N;
pfam_target db:Pfam-A.hmm|PF07498.12 evalue:1.4e-10 score:40.2 best_domain_score:39.3 name:Rho_N;
18308 17892 CDS
ID metaerg.pl|08166
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus sabuli;
genomedb_acc GCF_900215145.1;
genomedb_target db:genomedb|GCF_900215145.1|WP_097208719.1 3 138 evalue:2.2e-41 qcov:98.60 identity:61.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF01243;
pfam_desc Pyridoxamine 5'-phosphate oxidase;
pfam_id Putative_PNPOx;
pfam_target db:Pfam-A.hmm|PF01243.20 evalue:6e-15 score:54.5 best_domain_score:53.6 name:Putative_PNPOx;
tigrfam_acc TIGR03668;
tigrfam_desc PPOX class probable F420-dependent enzyme, Rv0121 family;
tigrfam_mainrole Unknown function;
tigrfam_name Rv0121_F420;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR03668 evalue:4.8e-45 score:152.2 best_domain_score:152.1 name:TIGR03668;
18571 21216 CDS
ID metaerg.pl|08167
allgo_ids GO:0005515;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF00563; PF00990; PF08447;
pfam_desc EAL domain; Diguanylate cyclase, GGDEF domain; PAS fold;
pfam_id EAL; GGDEF; PAS_3;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:5.3e-70 score:234.9 best_domain_score:234.3 name:EAL; db:Pfam-A.hmm|PF00990.21 evalue:1.1e-19 score:70.0 best_domain_score:69.1 name:GGDEF; db:Pfam-A.hmm|PF08447.12 evalue:4.1e-09 score:35.8 best_domain_score:34.8 name:PAS_3;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:1.2e-11 score:43.7 best_domain_score:43.0 name:TIGR00254;
21226 24009 CDS
ID metaerg.pl|08168
allko_ids K07654; K03407; K07641; K07646; K07642; K08282; K08801; K07636; K07653; K01769; K06379; K07709; K02342; K04757;
kegg_pathway_id 02020; 03030; 00230;
kegg_pathway_name Two-component system - General; DNA replication; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF00563; PF00990; PF08448;
pfam_desc EAL domain; Diguanylate cyclase, GGDEF domain; PAS fold;
pfam_id EAL; GGDEF; PAS_4;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:8.2e-75 score:250.6 best_domain_score:248.0 name:EAL; db:Pfam-A.hmm|PF00990.21 evalue:1.5e-40 score:137.8 best_domain_score:136.1 name:GGDEF; db:Pfam-A.hmm|PF08448.10 evalue:2.6e-09 score:36.5 best_domain_score:33.8 name:PAS_4;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:5.4e-35 score:119.7 best_domain_score:118.9 name:TIGR00254;
tm_num 3;
21226 24009 transmembrane_helix
ID metaerg.pl|08169
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
topology i21358-21411o21439-21507i21526-21594o;
24071 25381 CDS
ID metaerg.pl|08170
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Ilumatobacteraceae;g__Ilumatobacter_A;s__Ilumatobacter_A coccineus;
genomedb_acc GCA_002748455.1;
genomedb_target db:genomedb|GCA_002748455.1|PIE34462.1 127 434 evalue:1.7e-95 qcov:70.60 identity:58.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF09587;
pfam_desc Bacterial capsule synthesis protein PGA_cap;
pfam_id PGA_cap;
pfam_target db:Pfam-A.hmm|PF09587.10 evalue:1.4e-65 score:220.5 best_domain_score:220.1 name:PGA_cap;
sp YES;
24071 24220 lipoprotein_signal_peptide
ID metaerg.pl|08171
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
26449 25409 CDS
ID metaerg.pl|08172
allec_ids 1.1.1.103;
allgo_ids GO:0055114; GO:0005737; GO:0008743; GO:0008270; GO:0019518;
allko_ids K00060;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Saccharothrix;s__Saccharothrix sp001984175;
genomedb_acc GCF_001984175.1;
genomedb_target db:genomedb|GCF_001984175.1|WP_077007703.1 5 340 evalue:5.3e-132 qcov:97.10 identity:72.60;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
metacyc_pathway_id THREONINE-DEG2-PWY; PWY-5448; THRDLCTCAT-PWY; THREOCAT-PWY;
metacyc_pathway_name L-threonine degradation II;; ; L-threonine degradation III (to methylglyoxal);; superpathway of L-threonine metabolism;;
metacyc_pathway_type THREONINE-DEG;; ; THREONINE-DEG;; Super-Pathways; THREONINE-DEG;;
pfam_acc PF08240; PF00107;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:3.3e-27 score:93.8 best_domain_score:93.0 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:7.7e-10 score:38.1 best_domain_score:36.9 name:ADH_zinc_N;
sprot_desc L-threonine 3-dehydrogenase;
sprot_id sp|Q5X748|TDH_LEGPA;
sprot_target db:uniprot_sprot|sp|Q5X748|TDH_LEGPA 18 283 evalue:4.7e-26 qcov:76.90 identity:29.00;
27417 26506 CDS
ID metaerg.pl|08173
allec_ids 3.1.1.-;
allgo_ids GO:0005737; GO:0005509; GO:0004341; GO:0019853;
allko_ids K14274;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis balhimycina;
genomedb_acc GCF_000384295.1;
genomedb_target db:genomedb|GCF_000384295.1|WP_020639969.1 8 297 evalue:5.2e-91 qcov:95.70 identity:61.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
metacyc_pathway_id LIPAS-PWY; PWY-6558; BIOTIN-BIOSYNTHESIS-PWY; PWY-6519; PWY0-1300;
metacyc_pathway_name triacylglycerol degradation;; heparan sulfate biosynthesis (late stages);; biotin biosynthesis I;; 8-amino-7-oxononanoate biosynthesis I;; 2-O-α-mannosyl-D-glycerate degradation;;
metacyc_pathway_type Fatty-Acid-and-Lipid-Degradation;; Glycosaminoglycans-Biosynthesis;; BIOTIN-SYN; Super-Pathways;; 7-Keto-8-aminopelargonate-Biosynthesis;; Sugars-And-Polysaccharides-Degradation;;
pfam_acc PF08450;
pfam_desc SMP-30/Gluconolactonase/LRE-like region;
pfam_id SGL;
pfam_target db:Pfam-A.hmm|PF08450.12 evalue:9.8e-61 score:204.7 best_domain_score:204.4 name:SGL;
sprot_desc Putative sugar lactone lactonase YvrE;
sprot_id sp|O34940|YVRE_BACSU;
sprot_target db:uniprot_sprot|sp|O34940|YVRE_BACSU 15 285 evalue:8.2e-35 qcov:89.40 identity:31.90;
27956 27648 CDS
ID metaerg.pl|08174
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
sp YES;
tm_num 1;
27648 27722 signal_peptide
ID metaerg.pl|08175
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
27956 27648 transmembrane_helix
ID metaerg.pl|08176
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
topology i27666-27734o;
28374 29570 CDS
ID metaerg.pl|08177
allgo_ids GO:0005351; GO:0008643; GO:0016020;
allko_ids K08217; K08219; K05820;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Actinopolymorphaceae;g__Actinopolymorpha;s__Actinopolymorpha alba;
genomedb_acc GCF_000373925.1;
genomedb_target db:genomedb|GCF_000373925.1|WP_026257601.1 14 398 evalue:6.6e-78 qcov:96.70 identity:43.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF01306; PF07690; PF12832; PF03825;
pfam_desc LacY proton/sugar symporter; Major Facilitator Superfamily; MFS_1 like family; Nucleoside H+ symporter;
pfam_id LacY_symp; MFS_1; MFS_1_like; Nuc_H_symport;
pfam_target db:Pfam-A.hmm|PF01306.19 evalue:4.8e-08 score:31.4 best_domain_score:30.2 name:LacY_symp; db:Pfam-A.hmm|PF07690.16 evalue:3.1e-13 score:48.6 best_domain_score:47.0 name:MFS_1; db:Pfam-A.hmm|PF12832.7 evalue:9.2e-34 score:116.1 best_domain_score:114.2 name:MFS_1_like; db:Pfam-A.hmm|PF03825.16 evalue:9.4e-36 score:122.9 best_domain_score:122.7 name:Nuc_H_symport;
tm_num 9;
28374 29570 transmembrane_helix
ID metaerg.pl|08178
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
topology i28407-28466o28494-28562i28599-28667o28827-28895i29016-29084o29127-29195i29256-29324o29397-29465i29484-29543o;
30320 29694 CDS
ID metaerg.pl|08179
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441929.1 1 206 evalue:3.6e-59 qcov:99.00 identity:55.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF00753; PF12706; PF13483;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2; Lactamase_B_3;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:6.1e-10 score:38.7 best_domain_score:36.3 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:6.9e-09 score:34.7 best_domain_score:32.6 name:Lactamase_B_2; db:Pfam-A.hmm|PF13483.6 evalue:9.5e-16 score:57.3 best_domain_score:57.0 name:Lactamase_B_3;
30500 33127 CDS
ID metaerg.pl|08180
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides_A;s__Nocardioides_A massiliensis;
genomedb_acc GCA_900067705.1;
genomedb_target db:genomedb|GCA_900067705.1|CCXJ01000025.1_8 75 875 evalue:4.0e-67 qcov:91.50 identity:30.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF02810;
pfam_desc SEC-C motif;
pfam_id SEC-C;
pfam_target db:Pfam-A.hmm|PF02810.15 evalue:5.2e-10 score:38.3 best_domain_score:37.5 name:SEC-C;
35174 33132 CDS
ID metaerg.pl|08181
allgo_ids GO:0005525; GO:0003924;
allko_ids K00956; K02355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666826.1 1 677 evalue:2.5e-274 qcov:99.60 identity:70.90;
kegg_pathway_id 00230; 00450; 00920;
kegg_pathway_name Purine metabolism; Selenoamino acid metabolism; Sulfur metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF00679; PF14492; PF03764; PF00009; PF03144; PF01926;
pfam_desc Elongation factor G C-terminus; Elongation Factor G, domain II; Elongation factor G, domain IV; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; 50S ribosome-binding GTPase;
pfam_id EFG_C; EFG_II; EFG_IV; GTP_EFTU; GTP_EFTU_D2; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00679.24 evalue:1.3e-20 score:72.5 best_domain_score:71.3 name:EFG_C; db:Pfam-A.hmm|PF14492.6 evalue:1.2e-14 score:53.4 best_domain_score:52.5 name:EFG_II; db:Pfam-A.hmm|PF03764.18 evalue:1.3e-39 score:133.9 best_domain_score:133.2 name:EFG_IV; db:Pfam-A.hmm|PF00009.27 evalue:1.9e-34 score:118.1 best_domain_score:117.6 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:4.5e-09 score:35.8 best_domain_score:34.6 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF01926.23 evalue:1.1e-06 score:27.9 best_domain_score:26.9 name:MMR_HSR1;
sprot_desc Elongation factor G-like protein;
sprot_id sp|P9WNM8|EFGL_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WNM8|EFGL_MYCTO 9 677 evalue:2.0e-121 qcov:98.40 identity:37.20;
tigrfam_acc TIGR00231;
tigrfam_desc small GTP-binding protein domain;
tigrfam_mainrole Unknown function;
tigrfam_name small_GTP;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:9.5e-13 score:47.4 best_domain_score:45.4 name:TIGR00231;
35750 35328 CDS
ID metaerg.pl|08182
allec_ids 3.1.-.-;
allgo_ids GO:0000287; GO:0004540;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669019.1 1 131 evalue:4.3e-40 qcov:93.60 identity:67.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01850;
pfam_desc PIN domain;
pfam_id PIN;
pfam_target db:Pfam-A.hmm|PF01850.21 evalue:1.6e-08 score:34.3 best_domain_score:34.0 name:PIN;
sprot_desc Ribonuclease VapC1;
sprot_id sp|P9WFC0|VAPC1_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WFC0|VAPC1_MYCTO 3 128 evalue:1.3e-14 qcov:90.00 identity:39.40;
36030 35737 CDS
ID metaerg.pl|08183
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium heckeshornense;
genomedb_acc GCF_001881585.2;
genomedb_target db:genomedb|GCF_001881585.2|WP_048889451.1 17 97 evalue:1.1e-23 qcov:83.50 identity:70.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
38308 36023 CDS
ID metaerg.pl|08184
allec_ids 3.1.11.5;
allgo_ids GO:0005524; GO:0009338; GO:0004003; GO:0003677; GO:0008854; GO:0000724;
allko_ids K03581;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__Bog-473;s__Bog-473 sp003169235;
genomedb_acc GCA_003169235.1;
genomedb_target db:genomedb|GCA_003169235.1|PMPX01000044.1_17 60 743 evalue:1.0e-151 qcov:89.90 identity:49.10;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF13086; PF13245; PF13401; PF13604; PF05127; PF02562; PF00580; PF13538; PF01443;
pfam_desc AAA domain; AAA domain; AAA domain; AAA domain; Helicase; PhoH-like protein; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain; Viral (Superfamily 1) RNA helicase;
pfam_id AAA_11; AAA_19; AAA_22; AAA_30; Helicase_RecD; PhoH; UvrD-helicase; UvrD_C_2; Viral_helicase1;
pfam_target db:Pfam-A.hmm|PF13086.6 evalue:4e-13 score:49.0 best_domain_score:25.5 name:AAA_11; db:Pfam-A.hmm|PF13245.6 evalue:8.8e-30 score:103.2 best_domain_score:100.1 name:AAA_19; db:Pfam-A.hmm|PF13401.6 evalue:2.3e-11 score:43.3 best_domain_score:41.9 name:AAA_22; db:Pfam-A.hmm|PF13604.6 evalue:2.5e-34 score:117.9 best_domain_score:105.0 name:AAA_30; db:Pfam-A.hmm|PF05127.14 evalue:4.5e-10 score:38.9 best_domain_score:38.9 name:Helicase_RecD; db:Pfam-A.hmm|PF02562.16 evalue:2e-06 score:26.7 best_domain_score:25.4 name:PhoH; db:Pfam-A.hmm|PF00580.21 evalue:5e-08 score:32.1 best_domain_score:30.6 name:UvrD-helicase; db:Pfam-A.hmm|PF13538.6 evalue:3.6e-15 score:54.8 best_domain_score:52.9 name:UvrD_C_2; db:Pfam-A.hmm|PF01443.18 evalue:1.1e-10 score:40.9 best_domain_score:17.5 name:Viral_helicase1;
sprot_desc RecBCD enzyme subunit RecD;
sprot_id sp|A0QS28|RECD_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QS28|RECD_MYCS2 80 741 evalue:8.5e-113 qcov:87.00 identity:44.00;
tigrfam_acc TIGR01447;
tigrfam_desc exodeoxyribonuclease V, alpha subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name recD;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01447 evalue:3.3e-146 score:487.4 best_domain_score:484.6 name:TIGR01447;
41898 38305 CDS
ID metaerg.pl|08185
allec_ids 3.1.11.5;
allgo_ids GO:0005524; GO:0004003; GO:0003677; GO:0008854; GO:0000287; GO:0000724;
allko_ids K03582;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Palsa-465;s__Palsa-465 sp003244035;
genomedb_acc GCA_003244035.1;
genomedb_target db:genomedb|GCA_003244035.1|PZS07481.1 10 1196 evalue:1.5e-266 qcov:99.20 identity:47.50;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF13245; PF13604; PF12705; PF00580; PF13361; PF13538;
pfam_desc AAA domain; AAA domain; PD-(D/E)XK nuclease superfamily; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain; UvrD-like helicase C-terminal domain;
pfam_id AAA_19; AAA_30; PDDEXK_1; UvrD-helicase; UvrD_C; UvrD_C_2;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:3.1e-22 score:78.7 best_domain_score:77.3 name:AAA_19; db:Pfam-A.hmm|PF13604.6 evalue:4.3e-08 score:32.3 best_domain_score:14.7 name:AAA_30; db:Pfam-A.hmm|PF12705.7 evalue:3.7e-06 score:26.3 best_domain_score:22.3 name:PDDEXK_1; db:Pfam-A.hmm|PF00580.21 evalue:2.5e-54 score:184.2 best_domain_score:91.8 name:UvrD-helicase; db:Pfam-A.hmm|PF13361.6 evalue:3.4e-14 score:52.2 best_domain_score:34.8 name:UvrD_C; db:Pfam-A.hmm|PF13538.6 evalue:7.9e-11 score:40.9 best_domain_score:20.8 name:UvrD_C_2;
sprot_desc RecBCD enzyme subunit RecB;
sprot_id sp|P9WMQ2|RECB_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WMQ2|RECB_MYCTO 11 1195 evalue:2.2e-192 qcov:99.00 identity:40.40;
tigrfam_acc TIGR00609;
tigrfam_desc exodeoxyribonuclease V, beta subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name recB;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00609 evalue:3.5e-218 score:726.7 best_domain_score:593.0 name:TIGR00609;
45419 41895 CDS
ID metaerg.pl|08186
allec_ids 3.1.11.5;
allgo_ids GO:0005618; GO:0009338; GO:0005576; GO:0005886; GO:0005524; GO:0004003; GO:0003677; GO:0008854; GO:0006310; GO:0000724;
allko_ids K03583;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__Bog-473;s__Bog-473 sp003160635;
genomedb_acc GCA_003160635.1;
genomedb_target db:genomedb|GCA_003160635.1|PMLV01000077.1_82 21 1166 evalue:6.1e-305 qcov:97.60 identity:51.50;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF04257; PF17946;
pfam_desc Exodeoxyribonuclease V, gamma subunit ; RecC C-terminal domain;
pfam_id Exonuc_V_gamma; RecC_C;
pfam_target db:Pfam-A.hmm|PF04257.14 evalue:1.1e-211 score:704.3 best_domain_score:703.9 name:Exonuc_V_gamma; db:Pfam-A.hmm|PF17946.1 evalue:2.5e-41 score:140.9 best_domain_score:140.9 name:RecC_C;
sprot_desc RecBCD enzyme subunit RecC;
sprot_id sp|P9WIQ5|RECC_MYCTU;
sprot_target db:uniprot_sprot|sp|P9WIQ5|RECC_MYCTU 19 1166 evalue:1.7e-208 qcov:97.80 identity:41.60;
tigrfam_acc TIGR01450;
tigrfam_desc exodeoxyribonuclease V, gamma subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name recC;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01450 evalue:6.5e-251 score:834.7 best_domain_score:834.4 name:TIGR01450;
45904 45467 CDS
ID metaerg.pl|08187
allec_ids 3.1.-.-;
allgo_ids GO:0000287; GO:0004540;
allko_ids K07064;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp003248655;
genomedb_acc GCA_003248655.1;
genomedb_target db:genomedb|GCA_003248655.1|PZU44179.1 1 142 evalue:1.6e-26 qcov:97.90 identity:51.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01850;
pfam_desc PIN domain;
pfam_id PIN;
pfam_target db:Pfam-A.hmm|PF01850.21 evalue:7.5e-16 score:58.0 best_domain_score:57.7 name:PIN;
sprot_desc Ribonuclease VapC7;
sprot_id sp|P9WFB2|VAPC7_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WFB2|VAPC7_MYCTO 1 120 evalue:2.6e-18 qcov:82.80 identity:50.00;
46176 45901 CDS
ID metaerg.pl|08188
allgo_ids GO:0005886;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia sp001942415;
genomedb_acc GCF_001942415.1;
genomedb_target db:genomedb|GCF_001942415.1|WP_075940595.1 13 91 evalue:3.6e-11 qcov:86.80 identity:53.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
sprot_desc Putative antitoxin VapB7;
sprot_id sp|O06777|VAPB7_MYCTU;
sprot_target db:uniprot_sprot|sp|O06777|VAPB7_MYCTU 8 87 evalue:1.2e-08 qcov:87.90 identity:46.20;
46880 46248 CDS
ID metaerg.pl|08189
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora avicenniae;
genomedb_acc GCF_900156065.1;
genomedb_target db:genomedb|GCF_900156065.1|WP_076471120.1 10 178 evalue:1.6e-30 qcov:80.50 identity:53.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF13305; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_33; TetR_N;
pfam_target db:Pfam-A.hmm|PF13305.6 evalue:1.8e-19 score:69.6 best_domain_score:69.6 name:TetR_C_33; db:Pfam-A.hmm|PF00440.23 evalue:1.4e-08 score:33.6 best_domain_score:33.0 name:TetR_N;
47034 49826 CDS
ID metaerg.pl|08190
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya tangerina;
genomedb_acc GCA_003074135.1;
genomedb_target db:genomedb|GCA_003074135.1|PPDK01000001.1_536 14 918 evalue:3.7e-188 qcov:97.30 identity:46.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF03176; PF12349;
pfam_desc MMPL family; Sterol-sensing domain of SREBP cleavage-activation;
pfam_id MMPL; Sterol-sensing;
pfam_target db:Pfam-A.hmm|PF03176.15 evalue:4.3e-28 score:97.4 best_domain_score:73.7 name:MMPL; db:Pfam-A.hmm|PF12349.8 evalue:2.7e-06 score:26.5 best_domain_score:20.0 name:Sterol-sensing;
sp YES;
tm_num 14;
47034 47153 signal_peptide
ID metaerg.pl|08191
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
47034 49826 transmembrane_helix
ID metaerg.pl|08192
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
topology i47070-47138o47787-47846i47865-47918o47946-48014i48051-48119o48162-48230i48291-48359o48372-48440i48588-48656o49302-49370i49389-49457o49470-49538i49602-49670o49683-49751i;
51170 49890 CDS
ID metaerg.pl|08193
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Nakamurellaceae;g__Nakamurella;s__Nakamurella multipartita;
genomedb_acc GCF_000024365.1;
genomedb_target db:genomedb|GCF_000024365.1|WP_012814075.1 45 415 evalue:2.5e-67 qcov:87.10 identity:46.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF09664; PF11796;
pfam_desc Protein of unknown function C-terminus (DUF2399); Protein of unknown function N-terminus (DUF3323);
pfam_id DUF2399; DUF3323;
pfam_target db:Pfam-A.hmm|PF09664.10 evalue:1.6e-46 score:157.2 best_domain_score:156.3 name:DUF2399; db:Pfam-A.hmm|PF11796.8 evalue:6e-37 score:126.8 best_domain_score:126.8 name:DUF3323;
tigrfam_acc TIGR02679;
tigrfam_desc TIGR02679 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR02679;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR02679 evalue:3.7e-73 score:245.9 best_domain_score:245.6 name:TIGR02679;
55432 51167 CDS
ID metaerg.pl|08194
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Microtetraspora;s__Microtetraspora glauca;
genomedb_acc GCF_001570385.1;
genomedb_target db:genomedb|GCF_001570385.1|WP_061258785.1 6 1415 evalue:3.6e-235 qcov:99.20 identity:41.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF13558;
pfam_desc Putative exonuclease SbcCD, C subunit;
pfam_id SbcCD_C;
pfam_target db:Pfam-A.hmm|PF13558.6 evalue:7e-21 score:73.5 best_domain_score:70.1 name:SbcCD_C;
tigrfam_acc TIGR02680;
tigrfam_desc TIGR02680 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR02680;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR02680 evalue:1.8e-235 score:783.9 best_domain_score:423.0 name:TIGR02680;
56928 55432 CDS
ID metaerg.pl|08195
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Nonomuraea;s__Nonomuraea solani;
genomedb_acc GCF_900108335.1;
genomedb_target db:genomedb|GCF_900108335.1|WP_103964739.1 2 464 evalue:2.9e-83 qcov:93.00 identity:43.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF09661;
pfam_desc Protein of unknown function (DUF2398);
pfam_id DUF2398;
pfam_target db:Pfam-A.hmm|PF09661.10 evalue:4.8e-81 score:272.0 best_domain_score:249.2 name:DUF2398;
tigrfam_acc TIGR02678;
tigrfam_desc TIGR02678 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR02678;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR02678 evalue:3.7e-50 score:170.2 best_domain_score:160.0 name:TIGR02678;
58469 56925 CDS
ID metaerg.pl|08196
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Catenuloplanes;s__Catenuloplanes japonicus;
genomedb_acc GCF_000717135.1;
genomedb_target db:genomedb|GCF_000717135.1|WP_051797717.1 20 511 evalue:7.7e-111 qcov:95.70 identity:49.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF09660;
pfam_desc Protein of unknown function (DUF2397);
pfam_id DUF2397;
pfam_target db:Pfam-A.hmm|PF09660.10 evalue:6.9e-123 score:410.3 best_domain_score:410.1 name:DUF2397;
tigrfam_acc TIGR02677;
tigrfam_desc TIGR02677 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR02677;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR02677 evalue:7.1e-74 score:248.4 best_domain_score:248.2 name:TIGR02677;
59173 58736 CDS
ID metaerg.pl|08197
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666784.1 4 145 evalue:2.0e-40 qcov:97.90 identity:66.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF01850;
pfam_desc PIN domain;
pfam_id PIN;
pfam_target db:Pfam-A.hmm|PF01850.21 evalue:3.6e-09 score:36.4 best_domain_score:36.0 name:PIN;
59457 59170 CDS
ID metaerg.pl|08198
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666785.1 1 94 evalue:1.0e-21 qcov:98.90 identity:61.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF02604;
pfam_desc Antitoxin Phd_YefM, type II toxin-antitoxin system;
pfam_id PhdYeFM_antitox;
pfam_target db:Pfam-A.hmm|PF02604.19 evalue:3.7e-11 score:41.9 best_domain_score:41.4 name:PhdYeFM_antitox;
tigrfam_acc TIGR01552;
tigrfam_desc prevent-host-death family protein;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name phd_fam;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01552 evalue:2.6e-09 score:35.5 best_domain_score:35.0 name:TIGR01552;
60683 59889 CDS
ID metaerg.pl|08199
allec_ids 3.5.1.-;
allgo_ids GO:0016811; GO:0019740; GO:0006212;
allko_ids K09023;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Chloroflexia;o__Chloroflexales;f__Chloroflexaceae;g__Chloroploca;s__Chloroploca asiatica;
genomedb_acc GCF_002532075.1;
genomedb_target db:genomedb|GCF_002532075.1|WP_097650623.1 1 254 evalue:9.5e-49 qcov:96.20 identity:41.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
metacyc_pathway_id PWY-1822; PWY-6548; PWY-0; PWY-5784; PWY-5327; LYSDEGII-PWY;
metacyc_pathway_name indole-3-acetate activation I;; ; putrescine degradation III;; indole-3-acetate inactivation VIII;; superpathway of L-lysine degradation;; L-lysine degradation III;;
metacyc_pathway_type Activation;; ; Putrescine-Degradation;; Indole-3-Acetate-Inactivation;; LYSINE-DEG; Super-Pathways;; LYSINE-DEG;;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:3.1e-21 score:75.4 best_domain_score:72.1 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:5.7e-16 score:59.0 best_domain_score:58.8 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:3e-09 score:35.7 best_domain_score:34.0 name:Hydrolase_4;
sprot_desc Putative aminoacrylate hydrolase RutD;
sprot_id sp|B7KWT4|RUTD_METC4;
sprot_target db:uniprot_sprot|sp|B7KWT4|RUTD_METC4 13 254 evalue:9.7e-16 qcov:91.70 identity:31.90;
62329 60854 CDS
ID metaerg.pl|08200
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668275.1 2 491 evalue:4.3e-87 qcov:99.80 identity:44.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:3.7e-18 score:64.7 best_domain_score:64.0 name:Peptidase_M23;
sp YES;
60854 60901 signal_peptide
ID metaerg.pl|08201
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
62643 63887 CDS
ID metaerg.pl|08202
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya tangerina;
genomedb_acc GCA_003074135.1;
genomedb_target db:genomedb|GCA_003074135.1|PPDK01000001.1_1045 6 407 evalue:4.2e-168 qcov:97.10 identity:68.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
65191 63974 CDS
ID metaerg.pl|08203
allgo_ids GO:0005524; GO:0046872;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__QHCA01;g__QHCA01;s__QHCA01 sp003244095;
genomedb_acc GCA_003244095.1;
genomedb_target db:genomedb|GCA_003244095.1|PZS26077.1 1 404 evalue:8.9e-163 qcov:99.80 identity:69.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF02222; PF02655; PF13535; PF18130; PF02786; PF07478;
pfam_desc ATP-grasp domain; ATP-grasp domain; ATP-grasp domain; ATP-grasp N-terminal domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus;
pfam_id ATP-grasp; ATP-grasp_3; ATP-grasp_4; ATPgrasp_N; CPSase_L_D2; Dala_Dala_lig_C;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:2.9e-06 score:26.2 best_domain_score:25.0 name:ATP-grasp; db:Pfam-A.hmm|PF02655.14 evalue:1.7e-06 score:27.4 best_domain_score:26.8 name:ATP-grasp_3; db:Pfam-A.hmm|PF13535.6 evalue:2.9e-08 score:32.7 best_domain_score:29.4 name:ATP-grasp_4; db:Pfam-A.hmm|PF18130.1 evalue:3.6e-08 score:33.1 best_domain_score:29.1 name:ATPgrasp_N; db:Pfam-A.hmm|PF02786.17 evalue:4.2e-05 score:22.4 best_domain_score:21.8 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:7.6e-06 score:24.8 best_domain_score:24.2 name:Dala_Dala_lig_C;
65281 66504 CDS
ID metaerg.pl|08204
allgo_ids GO:0005524;
allko_ids K01945;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia sp001942185;
genomedb_acc GCF_001942185.1;
genomedb_target db:genomedb|GCF_001942185.1|WP_075955789.1 1 407 evalue:5.4e-176 qcov:100.00 identity:72.20;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF02222; PF02786; PF07478; PF01071;
pfam_desc ATP-grasp domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain;
pfam_id ATP-grasp; CPSase_L_D2; Dala_Dala_lig_C; GARS_A;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:1.1e-07 score:30.9 best_domain_score:29.8 name:ATP-grasp; db:Pfam-A.hmm|PF02786.17 evalue:5.8e-11 score:41.5 best_domain_score:40.9 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:3.6e-05 score:22.6 best_domain_score:22.1 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF01071.19 evalue:6.3e-07 score:28.6 best_domain_score:28.0 name:GARS_A;
66551 67582 CDS
ID metaerg.pl|08205
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Palsa-506;s__Palsa-506 sp003168215;
genomedb_acc GCA_003168215.1;
genomedb_target db:genomedb|GCA_003168215.1|PMSW01000071.1_22 31 332 evalue:2.2e-66 qcov:88.00 identity:51.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
67615 68745 CDS
ID metaerg.pl|08206
allgo_ids GO:0005506; GO:0005737; GO:0006826; GO:0008849; GO:0046214; GO:0055072;
allko_ids K07214;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Palsa-504;s__Palsa-504 sp003168295;
genomedb_acc GCA_003168295.1;
genomedb_target db:genomedb|GCA_003168295.1|PMST01000285.1_2 1 376 evalue:7.7e-153 qcov:100.00 identity:69.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF11806; PF00756;
pfam_desc Domain of unknown function (DUF3327); Putative esterase;
pfam_id DUF3327; Esterase;
pfam_target db:Pfam-A.hmm|PF11806.8 evalue:2.5e-06 score:27.4 best_domain_score:25.5 name:DUF3327; db:Pfam-A.hmm|PF00756.20 evalue:1.7e-25 score:89.3 best_domain_score:88.8 name:Esterase;
sprot_desc Enterochelin esterase;
sprot_id sp|P13039|FES_ECOLI;
sprot_target db:uniprot_sprot|sp|P13039|FES_ECOLI 59 363 evalue:4.0e-15 qcov:81.10 identity:24.00;
68803 69531 CDS
ID metaerg.pl|08207
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus sabuli;
genomedb_acc GCF_900215145.1;
genomedb_target db:genomedb|GCF_900215145.1|WP_097206683.1 1 240 evalue:1.0e-89 qcov:99.20 identity:62.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF00756;
pfam_desc Putative esterase;
pfam_id Esterase;
pfam_target db:Pfam-A.hmm|PF00756.20 evalue:8.7e-08 score:31.3 best_domain_score:30.6 name:Esterase;
69670 70308 CDS
ID metaerg.pl|08208
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Dermatophilaceae;g__URHB0013;s__URHB0013 sp000620545;
genomedb_acc GCF_000620545.1;
genomedb_target db:genomedb|GCF_000620545.1|WP_081802863.1 15 208 evalue:3.2e-23 qcov:91.50 identity:36.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF14417;
pfam_desc MEDS: MEthanogen/methylotroph, DcmR Sensory domain;
pfam_id MEDS;
pfam_target db:Pfam-A.hmm|PF14417.6 evalue:3.8e-22 score:78.1 best_domain_score:77.8 name:MEDS;
70353 71489 CDS
ID metaerg.pl|08209
allgo_ids GO:0003676; GO:0004519;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__HRBIN33;s__HRBIN33 sp002923375;
genomedb_acc GCA_002923375.1;
genomedb_target db:genomedb|GCA_002923375.1|GBD32638.1 8 362 evalue:9.4e-58 qcov:93.90 identity:38.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF01844; PF13395;
pfam_desc HNH endonuclease; HNH endonuclease;
pfam_id HNH; HNH_4;
pfam_target db:Pfam-A.hmm|PF01844.23 evalue:8.4e-07 score:28.3 best_domain_score:27.6 name:HNH; db:Pfam-A.hmm|PF13395.6 evalue:3.3e-10 score:39.0 best_domain_score:37.9 name:HNH_4;
71713 72054 CDS
ID metaerg.pl|08210
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Agrococcus;s__Agrococcus baldri;
genomedb_acc GCF_900114805.1;
genomedb_target db:genomedb|GCF_900114805.1|WP_092919173.1 11 104 evalue:5.9e-24 qcov:83.20 identity:59.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
72232 73716 CDS
ID metaerg.pl|08211
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus sabuli;
genomedb_acc GCF_900215145.1;
genomedb_target db:genomedb|GCF_900215145.1|WP_097207947.1 7 489 evalue:1.3e-176 qcov:97.80 identity:69.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
74080 74757 CDS
ID metaerg.pl|08212
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia autotrophica_A;
genomedb_acc GCF_000717175.1;
genomedb_target db:genomedb|GCF_000717175.1|WP_037039870.1 8 219 evalue:3.2e-61 qcov:94.20 identity:57.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
75093 76784 CDS
ID metaerg.pl|08213
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441910.1 94 526 evalue:6.8e-52 qcov:76.90 identity:32.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF02720;
pfam_desc Domain of unknown function (DUF222);
pfam_id DUF222;
pfam_target db:Pfam-A.hmm|PF02720.17 evalue:1.2e-29 score:103.0 best_domain_score:102.4 name:DUF222;
77870 77049 CDS
ID metaerg.pl|08214
allgo_ids GO:0005216; GO:0006811; GO:0016020;
genomedb_OC d__Archaea;p__Nanoarchaeota;c__Nanoarchaeia;o__UBA10117;f__ARS21;g__ARS21;s__ARS21 sp002686215;
genomedb_acc GCA_002686215.1;
genomedb_target db:genomedb|GCA_002686215.1|MAG48470.1 6 262 evalue:5.8e-49 qcov:94.10 identity:44.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF01036;
pfam_desc Bacteriorhodopsin-like protein;
pfam_id Bac_rhodopsin;
pfam_target db:Pfam-A.hmm|PF01036.18 evalue:3.7e-13 score:48.8 best_domain_score:48.4 name:Bac_rhodopsin;
tm_num 7;
77870 77049 transmembrane_helix
ID metaerg.pl|08215
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
topology o77091-77159i77217-77285o77343-77399i77418-77486o77514-77582i77643-77702o77730-77798i;
78272 79585 CDS
ID metaerg.pl|08216
allec_ids 4.99.1.12;
allgo_ids GO:0016829; GO:0016151; GO:0051188; GO:0051604;
allko_ids K09121;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas cellasea;
genomedb_acc GCF_000767135.1;
genomedb_target db:genomedb|GCF_000767135.1|WP_052104384.1 7 426 evalue:3.6e-109 qcov:96.10 identity:54.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF01969;
pfam_desc Protein of unknown function DUF111;
pfam_id DUF111;
pfam_target db:Pfam-A.hmm|PF01969.17 evalue:2.2e-122 score:408.0 best_domain_score:407.8 name:DUF111;
sprot_desc Pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel insertion protein;
sprot_id sp|A1SD28|LARC_NOCSJ;
sprot_target db:uniprot_sprot|sp|A1SD28|LARC_NOCSJ 23 413 evalue:1.8e-99 qcov:89.50 identity:54.30;
tigrfam_acc TIGR00299;
tigrfam_desc TIGR00299 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00299;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00299 evalue:2.1e-87 score:292.9 best_domain_score:292.7 name:TIGR00299;
80321 79629 CDS
ID metaerg.pl|08217
allec_ids 2.5.1.143;
allgo_ids GO:0006189; GO:0016021; GO:0005886; GO:0016787; GO:0016740;
allko_ids K06898;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas cellasea;
genomedb_acc GCF_000767135.1;
genomedb_target db:genomedb|GCF_000767135.1|WP_034633891.1 1 224 evalue:8.8e-83 qcov:97.40 identity:73.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF00731;
pfam_desc AIR carboxylase;
pfam_id AIRC;
pfam_target db:Pfam-A.hmm|PF00731.20 evalue:1.1e-16 score:60.0 best_domain_score:60.0 name:AIRC;
sprot_desc Pyridinium-3,5-biscarboxylic acid mononucleotide synthase;
sprot_id sp|F9UST0|LARB_LACPL;
sprot_target db:uniprot_sprot|sp|F9UST0|LARB_LACPL 13 222 evalue:3.1e-50 qcov:91.30 identity:49.50;
81174 80314 CDS
ID metaerg.pl|08218
allgo_ids GO:0004066; GO:0006529;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptacidiphilus;s__Streptacidiphilus albus;
genomedb_acc GCF_000744705.1;
genomedb_target db:genomedb|GCF_000744705.1|WP_034090687.1 11 281 evalue:2.3e-93 qcov:94.80 identity:67.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF00733; PF02540;
pfam_desc Asparagine synthase; NAD synthase;
pfam_id Asn_synthase; NAD_synthase;
pfam_target db:Pfam-A.hmm|PF00733.21 evalue:3.9e-12 score:45.7 best_domain_score:44.7 name:Asn_synthase; db:Pfam-A.hmm|PF02540.17 evalue:7.4e-06 score:24.5 best_domain_score:21.1 name:NAD_synthase;
82622 81180 CDS
ID metaerg.pl|08219
allec_ids 1.1.1.44;
allgo_ids GO:0004616; GO:0006098; GO:0055114; GO:0005829; GO:0050661; GO:0046177; GO:0009051;
allko_ids K00033;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Georgenia_A;s__Georgenia_A satyanarayanai;
genomedb_acc GCA_900116375.1;
genomedb_target db:genomedb|GCA_900116375.1|SSA43333.1 1 479 evalue:9.1e-191 qcov:99.80 identity:69.60;
kegg_pathway_id 00480; 00030;
kegg_pathway_name Glutathione metabolism; Pentose phosphate pathway;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
metacyc_pathway_id P122-PWY; PENTOSE-P-PWY;
metacyc_pathway_name heterolactic fermentation;; pentose phosphate pathway;;
metacyc_pathway_type Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Pentose-Phosphate-Cycle; Super-Pathways;;
pfam_acc PF00393; PF03446;
pfam_desc 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id 6PGD; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF00393.19 evalue:6e-113 score:376.2 best_domain_score:376.0 name:6PGD; db:Pfam-A.hmm|PF03446.15 evalue:4.5e-50 score:169.1 best_domain_score:168.2 name:NAD_binding_2;
sprot_desc 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating;
sprot_id sp|P80859|6PGD_BACSU;
sprot_target db:uniprot_sprot|sp|P80859|6PGD_BACSU 12 471 evalue:5.0e-135 qcov:95.80 identity:54.20;
tigrfam_acc TIGR00873;
tigrfam_desc 6-phosphogluconate dehydrogenase (decarboxylating);
tigrfam_mainrole Energy metabolism;
tigrfam_name gnd;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00873 evalue:1.5e-191 score:636.4 best_domain_score:636.2 name:TIGR00873;
82961 84013 CDS
ID metaerg.pl|08220
allgo_ids GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas sp001040865;
genomedb_acc GCF_001040865.1;
genomedb_target db:genomedb|GCF_001040865.1|WP_048341635.1 21 342 evalue:1.2e-104 qcov:92.00 identity:63.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF00356; PF00532; PF13377;
pfam_desc Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of LacI family; Periplasmic binding protein-like domain;
pfam_id LacI; Peripla_BP_1; Peripla_BP_3;
pfam_target db:Pfam-A.hmm|PF00356.21 evalue:1.5e-15 score:55.9 best_domain_score:55.1 name:LacI; db:Pfam-A.hmm|PF00532.21 evalue:2.5e-18 score:65.7 best_domain_score:65.4 name:Peripla_BP_1; db:Pfam-A.hmm|PF13377.6 evalue:6e-33 score:113.7 best_domain_score:112.4 name:Peripla_BP_3;
sprot_desc HTH-type transcriptional regulator DegA;
sprot_id sp|P37947|DEGA_BACSU;
sprot_target db:uniprot_sprot|sp|P37947|DEGA_BACSU 21 342 evalue:2.9e-36 qcov:92.00 identity:32.60;
85275 83998 CDS
ID metaerg.pl|08221
allgo_ids GO:0050043;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptacidiphilus;s__Streptacidiphilus jiangxiensis;
genomedb_acc GCF_900109465.1;
genomedb_target db:genomedb|GCF_900109465.1|WP_042445410.1 1 425 evalue:1.1e-176 qcov:100.00 identity:72.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF09861;
pfam_desc Lactate racemase N-terminal domain;
pfam_id Lar_N;
pfam_target db:Pfam-A.hmm|PF09861.9 evalue:6e-23 score:80.3 best_domain_score:76.6 name:Lar_N;
85568 87172 CDS
ID metaerg.pl|08222
allec_ids 2.7.1.12;
allgo_ids GO:0005975; GO:0016773; GO:0005524; GO:0046316; GO:0046177;
allko_ids K11216; K00848; K00851; K00880; K00854;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas sp003115775;
genomedb_acc GCF_003115775.1;
genomedb_target db:genomedb|GCF_003115775.1|WP_109133273.1 7 508 evalue:5.6e-165 qcov:94.00 identity:61.20;
kegg_pathway_id 00040; 00030; 00051;
kegg_pathway_name Pentose and glucuronate interconversions; Pentose phosphate pathway; Fructose and mannose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
metacyc_pathway_id PWY-5530; GLUCONSUPER-PWY;
metacyc_pathway_name sorbitol biosynthesis II;; D-gluconate degradation;;
metacyc_pathway_type Sorbitol-Biosynthesis;; CARBOXYLATES-DEG;;
pfam_acc PF02782; PF00370;
pfam_desc FGGY family of carbohydrate kinases, C-terminal domain; FGGY family of carbohydrate kinases, N-terminal domain;
pfam_id FGGY_C; FGGY_N;
pfam_target db:Pfam-A.hmm|PF02782.16 evalue:1.7e-34 score:118.5 best_domain_score:117.6 name:FGGY_C; db:Pfam-A.hmm|PF00370.21 evalue:1.7e-52 score:177.7 best_domain_score:177.3 name:FGGY_N;
sprot_desc Gluconokinase;
sprot_id sp|P46834|GNTK_BACLI;
sprot_target db:uniprot_sprot|sp|P46834|GNTK_BACLI 12 475 evalue:5.1e-80 qcov:86.90 identity:37.20;
88370 87246 CDS
ID metaerg.pl|08223
allec_ids 4.3.1.27;
allgo_ids GO:0016841; GO:0030170;
allko_ids K20757;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__UBA4001;s__UBA4001 sp002384855;
genomedb_acc GCA_002384855.1;
genomedb_target db:genomedb|GCA_002384855.1|DGBP01000058.1_12 20 374 evalue:1.1e-90 qcov:94.90 identity:54.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.408176; 88.592; 0.346904; 0.51631; 89.8634;
pfam_acc PF01168; PF14031;
pfam_desc Alanine racemase, N-terminal domain; Putative serine dehydratase domain;
pfam_id Ala_racemase_N; D-ser_dehydrat;
pfam_target db:Pfam-A.hmm|PF01168.20 evalue:4.9e-32 score:110.6 best_domain_score:109.3 name:Ala_racemase_N; db:Pfam-A.hmm|PF14031.6 evalue:1.3e-19 score:69.9 best_domain_score:68.5 name:D-ser_dehydrat;
sprot_desc D-threo-3-hydroxyaspartate dehydratase;
sprot_id sp|B2DFG5|DTHAD_DELSH;
sprot_target db:uniprot_sprot|sp|B2DFG5|DTHAD_DELSH 20 344 evalue:3.0e-39 qcov:86.90 identity:37.10;
>Feature NODE_56_length_88412_cov_39.5772
3 1322 CDS
ID metaerg.pl|08224
allec_ids 3.6.4.12;
allgo_ids GO:0003676; GO:0005524; GO:0006139; GO:0016818; GO:0008026; GO:0003677; GO:0051536; GO:0046872; GO:0006301;
allko_ids K03722;
casgene_acc COG1199_DinG_CAS-IV-A;
casgene_name DinG;
casgene_target db:casgenes.hmm|COG1199_DinG_CAS-IV-A evalue:1.9e-86 score:290.0 best_domain_score:289.8 name:DinG;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724671.1 1 438 evalue:1.5e-195 qcov:99.80 identity:76.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF13307;
pfam_desc Helicase C-terminal domain;
pfam_id Helicase_C_2;
pfam_target db:Pfam-A.hmm|PF13307.6 evalue:7.1e-35 score:119.9 best_domain_score:119.2 name:Helicase_C_2;
sprot_desc Probable ATP-dependent DNA helicase YoaA;
sprot_id sp|P76257|YOAA_ECOLI;
sprot_target db:uniprot_sprot|sp|P76257|YOAA_ECOLI 1 432 evalue:3.3e-85 qcov:98.40 identity:41.00;
1441 2097 CDS
ID metaerg.pl|08225
allgo_ids GO:0005737; GO:0002949;
allko_ids K14742;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724666.1 1 218 evalue:2.2e-67 qcov:100.00 identity:60.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00814;
pfam_desc Glycoprotease family;
pfam_id Peptidase_M22;
pfam_target db:Pfam-A.hmm|PF00814.25 evalue:1.1e-27 score:96.7 best_domain_score:96.3 name:Peptidase_M22;
sprot_desc tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;
sprot_id sp|Q87RD1|TSAB_VIBPA;
sprot_target db:uniprot_sprot|sp|Q87RD1|TSAB_VIBPA 3 217 evalue:2.9e-34 qcov:98.60 identity:39.80;
tigrfam_acc TIGR03725;
tigrfam_desc tRNA threonylcarbamoyl adenosine modification protein YeaZ;
tigrfam_mainrole Protein synthesis;
tigrfam_name T6A_YeaZ;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03725 evalue:2.5e-52 score:177.1 best_domain_score:176.9 name:TIGR03725;
3257 2484 CDS
ID metaerg.pl|08226
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724875.1 10 251 evalue:3.7e-74 qcov:94.20 identity:52.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF01636; PF01633;
pfam_desc Phosphotransferase enzyme family; Choline/ethanolamine kinase;
pfam_id APH; Choline_kinase;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:8.5e-17 score:61.1 best_domain_score:60.8 name:APH; db:Pfam-A.hmm|PF01633.20 evalue:4e-11 score:42.1 best_domain_score:38.8 name:Choline_kinase;
3919 3254 CDS
ID metaerg.pl|08227
allgo_ids GO:0016020; GO:0034257; GO:0034258;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724874.1 23 219 evalue:1.7e-70 qcov:89.10 identity:67.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF04973;
pfam_desc Nicotinamide mononucleotide transporter;
pfam_id NMN_transporter;
pfam_target db:Pfam-A.hmm|PF04973.12 evalue:3.1e-42 score:143.7 best_domain_score:143.5 name:NMN_transporter;
tigrfam_acc TIGR01528;
tigrfam_desc nicotinamide mononucleotide transporter PnuC;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name NMN_trans_PnuC;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01528 evalue:2.6e-16 score:59.3 best_domain_score:59.0 name:TIGR01528;
tm_num 5;
3919 3254 transmembrane_helix
ID metaerg.pl|08228
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology o3344-3412i3425-3493o3599-3667i3755-3814o3824-3892i;
6041 3909 CDS
ID metaerg.pl|08229
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724873.1 18 710 evalue:2.9e-286 qcov:97.60 identity:68.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF07715; PF00593;
pfam_desc TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:1.6e-14 score:53.6 best_domain_score:53.6 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:8.7e-32 score:110.8 best_domain_score:109.3 name:TonB_dep_Rec;
sp YES;
3909 3968 signal_peptide
ID metaerg.pl|08230
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
8715 6442 CDS
ID metaerg.pl|08231
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724870.1 11 753 evalue:2.0e-91 qcov:98.20 identity:32.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
sp YES;
6442 6516 signal_peptide
ID metaerg.pl|08232
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
10989 8740 CDS
ID metaerg.pl|08233
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter;s__Hymenobacter norwichensis;
genomedb_acc GCF_000420705.1;
genomedb_target db:genomedb|GCF_000420705.1|WP_022826361.1 37 725 evalue:1.3e-82 qcov:92.00 identity:34.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF17164;
pfam_desc Domain of unknown function (DUF5122) beta-propeller;
pfam_id DUF5122;
pfam_target db:Pfam-A.hmm|PF17164.4 evalue:5.3e-07 score:29.0 best_domain_score:16.5 name:DUF5122;
sp YES;
8740 8805 signal_peptide
ID metaerg.pl|08234
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
13640 11130 CDS
ID metaerg.pl|08235
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Geitlerinemaceae;g__Geitlerinema;s__Geitlerinema sp001657325;
genomedb_acc GCA_001657325.1;
genomedb_target db:genomedb|GCA_001657325.1|LWRO01000066.1_14 31 827 evalue:3.0e-80 qcov:95.30 identity:37.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF13229;
pfam_desc Right handed beta helix region;
pfam_id Beta_helix;
pfam_target db:Pfam-A.hmm|PF13229.6 evalue:2.2e-23 score:82.1 best_domain_score:42.8 name:Beta_helix;
sp YES;
11130 11219 signal_peptide
ID metaerg.pl|08236
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
14589 14152 CDS
ID metaerg.pl|08237
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF12158;
pfam_desc Protein of unknown function (DUF3592);
pfam_id DUF3592;
pfam_target db:Pfam-A.hmm|PF12158.8 evalue:9.1e-08 score:31.5 best_domain_score:31.3 name:DUF3592;
sp YES;
tm_num 2;
14152 14241 signal_peptide
ID metaerg.pl|08238
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
14589 14152 transmembrane_helix
ID metaerg.pl|08239
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i14170-14238o14512-14571i;
14825 17755 CDS
ID metaerg.pl|08240
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169424.1 12 969 evalue:3.1e-286 qcov:98.20 identity:58.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF14938; PF00515; PF13424; PF13432; PF14559; PF07719; PF13181; PF17874; PF00486;
pfam_desc Soluble NSF attachment protein, SNAP; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; MalT-like TPR region; Transcriptional regulatory protein, C terminal;
pfam_id SNAP; TPR_1; TPR_12; TPR_16; TPR_19; TPR_2; TPR_8; TPR_MalT; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF14938.6 evalue:3e-07 score:29.4 best_domain_score:23.5 name:SNAP; db:Pfam-A.hmm|PF00515.28 evalue:4.9e-08 score:31.7 best_domain_score:12.8 name:TPR_1; db:Pfam-A.hmm|PF13424.6 evalue:4.7e-22 score:77.3 best_domain_score:43.5 name:TPR_12; db:Pfam-A.hmm|PF13432.6 evalue:2.8e-08 score:33.5 best_domain_score:18.4 name:TPR_16; db:Pfam-A.hmm|PF14559.6 evalue:7.3e-09 score:35.2 best_domain_score:21.2 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:6e-07 score:28.4 best_domain_score:12.7 name:TPR_2; db:Pfam-A.hmm|PF13181.6 evalue:8.2e-08 score:31.1 best_domain_score:11.0 name:TPR_8; db:Pfam-A.hmm|PF17874.1 evalue:2.8e-09 score:36.1 best_domain_score:22.5 name:TPR_MalT; db:Pfam-A.hmm|PF00486.28 evalue:1.5e-18 score:65.9 best_domain_score:64.4 name:Trans_reg_C;
17890 19059 CDS
ID metaerg.pl|08241
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724864.1 49 384 evalue:6.4e-118 qcov:86.40 identity:61.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
sp YES;
17890 17967 signal_peptide
ID metaerg.pl|08242
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
19212 20081 CDS
ID metaerg.pl|08243
genomedb_OC d__Bacteria;p__Desulfuromonadota;c__Desulfuromonadia;o__Desulfuromonadales;f__ATBO01;g__ATBO01;s__ATBO01 sp000472285;
genomedb_acc GCF_000472285.1;
genomedb_target db:genomedb|GCF_000472285.1|WP_027716874.1 5 288 evalue:4.9e-22 qcov:98.30 identity:31.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF09851;
pfam_desc Short C-terminal domain;
pfam_id SHOCT;
pfam_target db:Pfam-A.hmm|PF09851.9 evalue:1.2e-06 score:27.3 best_domain_score:26.3 name:SHOCT;
sp YES;
19212 19268 lipoprotein_signal_peptide
ID metaerg.pl|08244
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
21073 20174 CDS
ID metaerg.pl|08245
allec_ids 5.4.99.25;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0106029; GO:0031119;
allko_ids K03177;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724665.1 11 299 evalue:3.2e-109 qcov:96.70 identity:71.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF09157; PF16198; PF01509;
pfam_desc Pseudouridine synthase II TruB, C-terminal; tRNA pseudouridylate synthase B C-terminal domain; TruB family pseudouridylate synthase (N terminal domain);
pfam_id TruB-C_2; TruB_C_2; TruB_N;
pfam_target db:Pfam-A.hmm|PF09157.11 evalue:1.5e-15 score:56.2 best_domain_score:54.9 name:TruB-C_2; db:Pfam-A.hmm|PF16198.5 evalue:2.9e-17 score:61.8 best_domain_score:60.5 name:TruB_C_2; db:Pfam-A.hmm|PF01509.18 evalue:9.6e-60 score:200.5 best_domain_score:199.8 name:TruB_N;
sprot_desc tRNA pseudouridine synthase B;
sprot_id sp|Q5NZR9|TRUB_AROAE;
sprot_target db:uniprot_sprot|sp|Q5NZR9|TRUB_AROAE 12 299 evalue:3.5e-78 qcov:96.30 identity:55.20;
tigrfam_acc TIGR00431;
tigrfam_desc tRNA pseudouridine(55) synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TruB;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00431 evalue:7.7e-80 score:266.7 best_domain_score:266.4 name:TIGR00431;
21208 21450 CDS
ID metaerg.pl|08246
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio;s__Thioalkalivibrio sp000420165;
genomedb_acc GCF_000420165.1;
genomedb_target db:genomedb|GCF_000420165.1|WP_024325944.1 1 76 evalue:1.6e-15 qcov:95.00 identity:59.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
21440 21880 CDS
ID metaerg.pl|08247
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfurivibrionaceae;g__XYD12-FULL-50-9;s__XYD12-FULL-50-9 sp001799225;
genomedb_acc GCA_001799225.1;
genomedb_target db:genomedb|GCA_001799225.1|OGR00811.1 3 138 evalue:1.5e-40 qcov:93.20 identity:59.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF01850;
pfam_desc PIN domain;
pfam_id PIN;
pfam_target db:Pfam-A.hmm|PF01850.21 evalue:5.2e-12 score:45.6 best_domain_score:45.3 name:PIN;
22159 23487 CDS
ID metaerg.pl|08248
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E argentinensis;
genomedb_acc GCF_900113905.1;
genomedb_target db:genomedb|GCF_900113905.1|WP_074887759.1 9 431 evalue:8.0e-133 qcov:95.70 identity:56.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF13692;
pfam_desc Glycosyl transferases group 1;
pfam_id Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF13692.6 evalue:8.1e-22 score:77.3 best_domain_score:76.6 name:Glyco_trans_1_4;
24954 23518 CDS
ID metaerg.pl|08249
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
allko_ids K00343;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724664.1 1 477 evalue:3.3e-217 qcov:99.80 identity:86.00;
kegg_pathway_id 00130; 00190;
kegg_pathway_name Ubiquinone biosynthesis; Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:3.9e-76 score:255.3 best_domain_score:255.3 name:Proton_antipo_M;
sprot_desc NADH-quinone oxidoreductase subunit N;
sprot_id sp|B8GNZ8|NUON_THISH;
sprot_target db:uniprot_sprot|sp|B8GNZ8|NUON_THISH 3 476 evalue:1.1e-139 qcov:99.20 identity:56.60;
tigrfam_acc TIGR01770;
tigrfam_desc proton-translocating NADH-quinone oxidoreductase, chain N;
tigrfam_mainrole Energy metabolism;
tigrfam_name NDH_I_N;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01770 evalue:6.4e-146 score:486.2 best_domain_score:485.9 name:TIGR01770;
tm_num 13;
24954 23518 transmembrane_helix
ID metaerg.pl|08250
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i23554-23607o23620-23688i23749-23811o23854-23922i24001-24069o24127-24195i24232-24300o24343-24396i24415-24468o24496-24564i24625-24693o24721-24789i24871-24939o;
26465 24951 CDS
ID metaerg.pl|08251
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0006120;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724662.1 1 502 evalue:7.2e-247 qcov:99.60 identity:86.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:7.6e-74 score:247.8 best_domain_score:247.8 name:Proton_antipo_M;
sprot_desc NADH-quinone oxidoreductase subunit M;
sprot_id sp|P50974|NUOM_RHOCA;
sprot_target db:uniprot_sprot|sp|P50974|NUOM_RHOCA 6 496 evalue:2.9e-125 qcov:97.40 identity:49.40;
tigrfam_acc TIGR01972;
tigrfam_desc proton-translocating NADH-quinone oxidoreductase, chain M;
tigrfam_mainrole Energy metabolism;
tigrfam_name NDH_I_M;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01972 evalue:5.8e-181 score:601.6 best_domain_score:601.4 name:TIGR01972;
tm_num 14;
26465 24951 transmembrane_helix
ID metaerg.pl|08252
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology o24963-25022i25041-25109o25200-25268i25287-25343o25353-25421i25440-25508o25551-25607i25668-25736o25764-25832i25851-25919o25962-26030i26067-26135o26193-26261i26334-26402o;
28444 26480 CDS
ID metaerg.pl|08253
allec_ids 7.1.1.-; 1.6.-.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
allko_ids K00341;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726955.1 3 654 evalue:6.2e-307 qcov:99.70 identity:83.60;
kegg_pathway_id 00130; 00190;
kegg_pathway_name Ubiquinone biosynthesis; Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00361; PF00662;
pfam_desc Proton-conducting membrane transporter; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus;
pfam_id Proton_antipo_M; Proton_antipo_N;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:4.7e-85 score:284.6 best_domain_score:284.6 name:Proton_antipo_M; db:Pfam-A.hmm|PF00662.20 evalue:3.7e-26 score:90.2 best_domain_score:90.2 name:Proton_antipo_N;
sp YES;
sprot_desc NADH-quinone oxidoreductase subunit L;
sprot_id sp|Q9JX92|NUOL_NEIMA;
sprot_target db:uniprot_sprot|sp|Q9JX92|NUOL_NEIMA 1 647 evalue:5.4e-201 qcov:98.90 identity:58.00;
tigrfam_acc TIGR01974;
tigrfam_desc proton-translocating NADH-quinone oxidoreductase, chain L;
tigrfam_mainrole Energy metabolism;
tigrfam_name NDH_I_L;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01974 evalue:1.8e-234 score:779.5 best_domain_score:779.1 name:TIGR01974;
tm_num 16;
26480 26530 lipoprotein_signal_peptide
ID metaerg.pl|08254
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
28444 26480 transmembrane_helix
ID metaerg.pl|08255
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology o26492-26551i26570-26638o26738-26806i26825-26884o26894-26962i27023-27091o27119-27187i27248-27316o27344-27412i27431-27499o27527-27586i27623-27691o27755-27823i27884-27952o28067-28135i28370-28438o;
28757 28452 CDS
ID metaerg.pl|08256
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0050136; GO:0048038; GO:0042773;
allko_ids K00340;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724661.1 1 101 evalue:3.8e-38 qcov:100.00 identity:93.10;
kegg_pathway_id 00130; 00190;
kegg_pathway_name Ubiquinone biosynthesis; Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00420;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
pfam_id Oxidored_q2;
pfam_target db:Pfam-A.hmm|PF00420.24 evalue:2.3e-23 score:81.0 best_domain_score:80.8 name:Oxidored_q2;
sprot_desc NADH-quinone oxidoreductase subunit K;
sprot_id sp|B1XWB1|NUOK_LEPCP;
sprot_target db:uniprot_sprot|sp|B1XWB1|NUOK_LEPCP 1 101 evalue:9.7e-33 qcov:100.00 identity:76.20;
tm_num 3;
28757 28452 transmembrane_helix
ID metaerg.pl|08257
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology o28464-28523i28536-28604o28632-28700i;
29362 28760 CDS
ID metaerg.pl|08258
allec_ids 7.1.1.-;
allgo_ids GO:0008137; GO:0055114; GO:0016021; GO:0042717; GO:0048038;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724660.1 1 200 evalue:4.5e-83 qcov:100.00 identity:84.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00499;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 6;
pfam_id Oxidored_q3;
pfam_target db:Pfam-A.hmm|PF00499.20 evalue:2.3e-38 score:130.4 best_domain_score:129.9 name:Oxidored_q3;
sprot_desc NADH-quinone oxidoreductase subunit J;
sprot_id sp|P50975|NUOJ_RHOCA;
sprot_target db:uniprot_sprot|sp|P50975|NUOJ_RHOCA 1 194 evalue:1.9e-16 qcov:97.00 identity:37.10;
tm_num 5;
29362 28760 transmembrane_helix
ID metaerg.pl|08259
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology o28769-28828i28847-28906o28916-28984i29021-29089o29183-29251i;
29863 29375 CDS
ID metaerg.pl|08260
allec_ids 7.1.1.-;
allgo_ids GO:0005886; GO:0051539; GO:0005506; GO:0050136; GO:0048038;
allko_ids K11260; K00122; K00380; K04014; K00337; K00873; K00204; K03941; K00245; K00235; K00123; K00240; K00246; K03390; K00443; K00532; K00207; K03388; K00176; K00170; K05588; K00390; K08349; K08264; K00265; K00338; K11181; K05580; K00172; K00533; K00436; K00124; K00205; K00336; K00441; K00171; K00125; K00192; K00335; K00226;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724659.1 1 162 evalue:1.1e-84 qcov:100.00 identity:93.80;
kegg_pathway_id 00920; 00010; 00710; 00230; 00020; 00770; 00910; 02020; 00251; 00633; 00680; 00410; 00190; 00130; 00720; 00983; 00240; 00632; 00620; 00640; 00650; 00790; 00630; 05012;
kegg_pathway_name Sulfur metabolism; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Purine metabolism; Citrate cycle (TCA cycle); Pantothenate and CoA biosynthesis; Nitrogen metabolism; Two-component system - General; Glutamate metabolism; Trinitrotoluene degradation; Methane metabolism; beta-Alanine metabolism; Oxidative phosphorylation; Ubiquinone biosynthesis; Reductive carboxylate cycle (CO2 fixation); Drug metabolism - other enzymes; Pyrimidine metabolism; Benzoate degradation via CoA ligation; Pyruvate metabolism; Propanoate metabolism; Butanoate metabolism; Folate biosynthesis; Glyoxylate and dicarboxylate metabolism; Parkinson's disease;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00037; PF13237; PF13484; PF13534; PF12797; PF12800; PF12838; PF13183; PF13187;
pfam_desc 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S double cluster binding domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id Fer4; Fer4_10; Fer4_16; Fer4_17; Fer4_2; Fer4_4; Fer4_7; Fer4_8; Fer4_9;
pfam_target db:Pfam-A.hmm|PF00037.27 evalue:8.3e-13 score:46.8 best_domain_score:28.3 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:7.5e-10 score:38.0 best_domain_score:30.6 name:Fer4_10; db:Pfam-A.hmm|PF13484.6 evalue:6.8e-09 score:35.8 best_domain_score:19.4 name:Fer4_16; db:Pfam-A.hmm|PF13534.6 evalue:1.8e-05 score:24.4 best_domain_score:17.0 name:Fer4_17; db:Pfam-A.hmm|PF12797.7 evalue:9.8e-07 score:27.8 best_domain_score:18.5 name:Fer4_2; db:Pfam-A.hmm|PF12800.7 evalue:4.3e-07 score:29.2 best_domain_score:20.9 name:Fer4_4; db:Pfam-A.hmm|PF12838.7 evalue:1.4e-12 score:47.2 best_domain_score:46.5 name:Fer4_7; db:Pfam-A.hmm|PF13183.6 evalue:2.6e-10 score:39.9 best_domain_score:22.4 name:Fer4_8; db:Pfam-A.hmm|PF13187.6 evalue:3.5e-09 score:35.9 best_domain_score:35.2 name:Fer4_9;
sprot_desc NADH-quinone oxidoreductase subunit I 2;
sprot_id sp|Q3J836|NUOI2_NITOC;
sprot_target db:uniprot_sprot|sp|Q3J836|NUOI2_NITOC 1 162 evalue:8.0e-45 qcov:100.00 identity:74.10;
tigrfam_acc TIGR01971;
tigrfam_desc NADH-quinone oxidoreductase, chain I;
tigrfam_mainrole Energy metabolism;
tigrfam_name NuoI;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01971 evalue:4.7e-42 score:141.6 best_domain_score:141.2 name:TIGR01971;
30887 29868 CDS
ID metaerg.pl|08261
allec_ids 7.1.1.-;
allgo_ids GO:0016020; GO:0055114; GO:0016021; GO:0005886; GO:0016655; GO:0048038;
allko_ids K00337;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724658.1 1 339 evalue:6.1e-173 qcov:100.00 identity:91.20;
kegg_pathway_id 00190; 00130;
kegg_pathway_name Oxidative phosphorylation; Ubiquinone biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00146;
pfam_desc NADH dehydrogenase;
pfam_id NADHdh;
pfam_target db:Pfam-A.hmm|PF00146.21 evalue:3.3e-128 score:426.4 best_domain_score:426.1 name:NADHdh;
sprot_desc NADH-quinone oxidoreductase subunit H;
sprot_id sp|A1WXW0|NUOH_HALHL;
sprot_target db:uniprot_sprot|sp|A1WXW0|NUOH_HALHL 7 327 evalue:4.9e-129 qcov:94.70 identity:70.70;
tm_num 8;
30887 29868 transmembrane_helix
ID metaerg.pl|08262
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology o29895-29963i30099-30158o30201-30269i30330-30398o30426-30479i30591-30659o30687-30755i30813-30881o;
33247 30884 CDS
ID metaerg.pl|08263
allec_ids 1.6.99.3; 1.6.99.5;
allgo_ids GO:0009055; GO:0051536; GO:0005743; GO:0070469; GO:0051537; GO:0051539; GO:0046872; GO:0008137; GO:0042773;
allko_ids K03934; K00122; K00380; K04014; K05299; K00201; K00532; K00123; K00202; K02035; K00369; K00338; K05580; K00203; K00436; K00176; K05588; K03388; K00817; K00390; K08348; K00205; K02567; K00336; K00372; K00360;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724657.1 1 784 evalue:0.0e+00 qcov:99.60 identity:76.20;
kegg_pathway_id 00920; 00020; 02020; 00910; 00680; 00130; 00360; 00340; 00190; 00720; 00400; 00401; 02010; 00790; 05012; 00350; 00630;
kegg_pathway_name Sulfur metabolism; Citrate cycle (TCA cycle); Two-component system - General; Nitrogen metabolism; Methane metabolism; Ubiquinone biosynthesis; Phenylalanine metabolism; Histidine metabolism; Oxidative phosphorylation; Reductive carboxylate cycle (CO2 fixation); Phenylalanine, tyrosine and tryptophan biosynthesis; Novobiocin biosynthesis; ABC transporters - General; Folate biosynthesis; Parkinson's disease; Tyrosine metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00111; PF13510; PF00384; PF10588;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region;
pfam_id Fer2; Fer2_4; Molybdopterin; NADH-G_4Fe-4S_3;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:6.2e-09 score:34.9 best_domain_score:33.5 name:Fer2; db:Pfam-A.hmm|PF13510.6 evalue:3.9e-21 score:74.1 best_domain_score:72.6 name:Fer2_4; db:Pfam-A.hmm|PF00384.22 evalue:5.3e-37 score:127.0 best_domain_score:79.6 name:Molybdopterin; db:Pfam-A.hmm|PF10588.9 evalue:4.6e-18 score:63.7 best_domain_score:62.3 name:NADH-G_4Fe-4S_3;
sprot_desc NADH-ubiquinone oxidoreductase 75 kDa subunit;
sprot_id sp|O21241|NDUS1_RECAM;
sprot_target db:uniprot_sprot|sp|O21241|NDUS1_RECAM 11 647 evalue:1.6e-114 qcov:80.90 identity:36.70;
tigrfam_acc TIGR01973;
tigrfam_desc NADH dehydrogenase (quinone), G subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name NuoG;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01973 evalue:7.9e-196 score:651.6 best_domain_score:651.4 name:TIGR01973;
34556 33261 CDS
ID metaerg.pl|08264
allec_ids 7.1.1.-; 1.6.99.5;
allgo_ids GO:0051539; GO:0010181; GO:0046872; GO:0051287; GO:0008137; GO:0048038;
allko_ids K00122; K05586; K00356; K03943; K05587; K00436; K00124; K00329; K00335; K00334; K03942;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724656.1 1 431 evalue:2.9e-236 qcov:100.00 identity:88.60;
kegg_pathway_id 00190; 05012; 00130; 00630; 00680;
kegg_pathway_name Oxidative phosphorylation; Parkinson's disease; Ubiquinone biosynthesis; Glyoxylate and dicarboxylate metabolism; Methane metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF01512; PF10589; PF10531;
pfam_desc Respiratory-chain NADH dehydrogenase 51 Kd subunit; NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; SLBB domain;
pfam_id Complex1_51K; NADH_4Fe-4S; SLBB;
pfam_target db:Pfam-A.hmm|PF01512.17 evalue:8.2e-45 score:151.6 best_domain_score:151.2 name:Complex1_51K; db:Pfam-A.hmm|PF10589.9 evalue:4e-31 score:106.2 best_domain_score:105.3 name:NADH_4Fe-4S; db:Pfam-A.hmm|PF10531.9 evalue:4e-15 score:54.6 best_domain_score:53.5 name:SLBB;
sprot_desc NADH-quinone oxidoreductase subunit F;
sprot_id sp|A8GYE0|NUOF_RICB8;
sprot_target db:uniprot_sprot|sp|A8GYE0|NUOF_RICB8 7 417 evalue:7.6e-135 qcov:95.40 identity:55.00;
tigrfam_acc TIGR01959;
tigrfam_desc NADH oxidoreductase (quinone), F subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name nuoF_fam;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01959 evalue:7.1e-198 score:656.2 best_domain_score:656.0 name:TIGR01959;
35236 34715 CDS
ID metaerg.pl|08265
allec_ids 1.6.99.3;
allgo_ids GO:0005747; GO:0005739; GO:0051537; GO:0046872; GO:0008137; GO:0048738; GO:0006120; GO:0007399;
allko_ids K05586; K00356; K03943; K00436; K05587; K00335; K03942; K00334; K00329;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724655.1 9 173 evalue:1.0e-75 qcov:95.40 identity:80.60;
kegg_pathway_id 00680; 00190; 00630; 05012; 00130;
kegg_pathway_name Methane metabolism; Oxidative phosphorylation; Glyoxylate and dicarboxylate metabolism; Parkinson's disease; Ubiquinone biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF01257;
pfam_desc Thioredoxin-like [2Fe-2S] ferredoxin;
pfam_id 2Fe-2S_thioredx;
pfam_target db:Pfam-A.hmm|PF01257.19 evalue:8.6e-47 score:157.9 best_domain_score:157.7 name:2Fe-2S_thioredx;
sprot_desc NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial;
sprot_id sp|P04394|NDUV2_BOVIN;
sprot_target db:uniprot_sprot|sp|P04394|NDUV2_BOVIN 34 172 evalue:2.8e-32 qcov:80.30 identity:43.90;
tigrfam_acc TIGR01958;
tigrfam_desc NADH-quinone oxidoreductase, E subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name nuoE_fam;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01958 evalue:2.5e-54 score:182.6 best_domain_score:182.4 name:TIGR01958;
36664 35411 CDS
ID metaerg.pl|08266
allec_ids 7.1.1.-; 1.6.99.5;
allgo_ids GO:0016651; GO:0048038; GO:0051287; GO:0055114; GO:0005886; GO:0050136;
allko_ids K13380; K00329; K05579; K13378; K00333; K03935;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724654.1 1 417 evalue:1.1e-229 qcov:100.00 identity:90.60;
kegg_pathway_id 05012; 00130; 00190;
kegg_pathway_name Parkinson's disease; Ubiquinone biosynthesis; Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00346;
pfam_desc Respiratory-chain NADH dehydrogenase, 49 Kd subunit;
pfam_id Complex1_49kDa;
pfam_target db:Pfam-A.hmm|PF00346.19 evalue:6.8e-122 score:405.0 best_domain_score:404.6 name:Complex1_49kDa;
sprot_desc NADH-quinone oxidoreductase subunit D;
sprot_id sp|Q3J831|NUOD_NITOC;
sprot_target db:uniprot_sprot|sp|Q3J831|NUOD_NITOC 1 417 evalue:7.0e-202 qcov:100.00 identity:77.70;
tigrfam_acc TIGR01962;
tigrfam_desc NADH dehydrogenase (quinone), D subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name NuoD;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01962 evalue:8.4e-178 score:590.2 best_domain_score:590.0 name:TIGR01962;
37389 36661 CDS
ID metaerg.pl|08267
allec_ids 7.1.1.-;
allgo_ids GO:0008137; GO:0055114; GO:0005886; GO:0048038;
allko_ids K00332;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724653.1 1 241 evalue:2.3e-121 qcov:99.60 identity:85.50;
kegg_pathway_id 00190; 00130;
kegg_pathway_name Oxidative phosphorylation; Ubiquinone biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00329;
pfam_desc Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
pfam_id Complex1_30kDa;
pfam_target db:Pfam-A.hmm|PF00329.19 evalue:1e-40 score:138.4 best_domain_score:137.5 name:Complex1_30kDa;
sprot_desc NADH-quinone oxidoreductase subunit C;
sprot_id sp|Q3BRN1|NUOC_XANC5;
sprot_target db:uniprot_sprot|sp|Q3BRN1|NUOC_XANC5 30 231 evalue:5.1e-72 qcov:83.50 identity:60.40;
tigrfam_acc TIGR01961;
tigrfam_desc NADH (or F420H2) dehydrogenase, subunit C;
tigrfam_mainrole Energy metabolism;
tigrfam_name NuoC_fam;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01961 evalue:4.1e-36 score:123.4 best_domain_score:110.1 name:TIGR01961;
37931 37386 CDS
ID metaerg.pl|08268
allec_ids 7.1.1.-;
allgo_ids GO:0051536; GO:0055114; GO:0005886; GO:0051539; GO:0005506; GO:0008137; GO:0048038;
allko_ids K13380; K05582; K00443; K03940; K00331;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724652.1 1 181 evalue:2.8e-100 qcov:100.00 identity:96.10;
kegg_pathway_id 00190; 05012; 00130; 00790;
kegg_pathway_name Oxidative phosphorylation; Parkinson's disease; Ubiquinone biosynthesis; Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF01058;
pfam_desc NADH ubiquinone oxidoreductase, 20 Kd subunit;
pfam_id Oxidored_q6;
pfam_target db:Pfam-A.hmm|PF01058.22 evalue:4.6e-23 score:80.7 best_domain_score:80.2 name:Oxidored_q6;
sprot_desc NADH-quinone oxidoreductase subunit B;
sprot_id sp|B4SQT5|NUOB_STRM5;
sprot_target db:uniprot_sprot|sp|B4SQT5|NUOB_STRM5 6 179 evalue:4.1e-90 qcov:96.10 identity:86.20;
tigrfam_acc TIGR01957;
tigrfam_desc NADH-quinone oxidoreductase, B subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name nuoB_fam;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01957 evalue:2e-76 score:254.0 best_domain_score:253.7 name:TIGR01957;
38278 37922 CDS
ID metaerg.pl|08269
allec_ids 7.1.1.-;
allgo_ids GO:0008137; GO:0055114; GO:0016021; GO:0005886; GO:0048038;
allko_ids K00330;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724651.1 1 118 evalue:5.7e-54 qcov:100.00 identity:94.90;
kegg_pathway_id 00130; 00190;
kegg_pathway_name Ubiquinone biosynthesis; Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00507;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
pfam_id Oxidored_q4;
pfam_target db:Pfam-A.hmm|PF00507.19 evalue:2.2e-41 score:139.3 best_domain_score:138.8 name:Oxidored_q4;
sprot_desc NADH-quinone oxidoreductase subunit A;
sprot_id sp|B5EN71|NUOA_ACIF5;
sprot_target db:uniprot_sprot|sp|B5EN71|NUOA_ACIF5 1 118 evalue:1.6e-42 qcov:100.00 identity:73.70;
tm_num 3;
38278 37922 transmembrane_helix
ID metaerg.pl|08270
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology o37934-38002i38099-38167o38180-38248i;
38439 38355 tRNA
ID metaerg.pl|08271
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
name tRNA_Leu_gag;
38886 38476 CDS
ID metaerg.pl|08272
allgo_ids GO:0009306; GO:0015450; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724650.1 1 118 evalue:1.9e-32 qcov:86.80 identity:68.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF03840;
pfam_desc Preprotein translocase SecG subunit;
pfam_id SecG;
pfam_target db:Pfam-A.hmm|PF03840.14 evalue:5.8e-19 score:67.2 best_domain_score:66.8 name:SecG;
tigrfam_acc TIGR00810;
tigrfam_desc preprotein translocase, SecG subunit;
tigrfam_mainrole Protein fate;
tigrfam_name secG;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00810 evalue:1.1e-22 score:79.0 best_domain_score:78.7 name:TIGR00810;
tm_num 2;
38886 38476 transmembrane_helix
ID metaerg.pl|08273
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i38479-38547o38629-38697i;
39659 38910 CDS
ID metaerg.pl|08274
allec_ids 5.3.1.1;
allgo_ids GO:0004807; GO:0005737; GO:0006094; GO:0006096;
allko_ids K01803;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724649.1 1 249 evalue:3.1e-102 qcov:100.00 identity:75.50;
kegg_pathway_id 00710; 00010; 00051;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Fructose and mannose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
metacyc_pathway_id P441-PWY; PWY-1042; ANAEROFRUCAT-PWY; PWY-3801; ANAGLYCOLYSIS-PWY; PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5484; P461-PWY; PWY66-373; P341-PWY; PWY-6142; CALVIN-PWY; PHOTOALL-PWY; P185-PWY; PWY-6146; GLYCOLYSIS-E-D; GLYCOLYSIS;
metacyc_pathway_name superpathway of N-acetylneuraminate degradation;; glycolysis IV (plant cytosol);; homolactic fermentation;; sucrose degradation II (sucrose synthase);; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; sucrose degradation V (sucrose α-glucosidase);; glycolysis V (Pyrococcus);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; Calvin-Benson-Bassham cycle;; oxygenic photosynthesis;; formaldehyde assimilation III (dihydroxyacetone cycle);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis I (from glucose 6-phosphate);;
metacyc_pathway_type CARBOXYLATES-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; Photosynthesis; Super-Pathways;; Formaldehyde-Assimilation;; Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;;
pfam_acc PF00121;
pfam_desc Triosephosphate isomerase;
pfam_id TIM;
pfam_target db:Pfam-A.hmm|PF00121.18 evalue:1.1e-88 score:296.0 best_domain_score:295.8 name:TIM;
sprot_desc Triosephosphate isomerase;
sprot_id sp|Q4UWC0|TPIS_XANC8;
sprot_target db:uniprot_sprot|sp|Q4UWC0|TPIS_XANC8 1 249 evalue:6.0e-76 qcov:100.00 identity:59.40;
tigrfam_acc TIGR00419;
tigrfam_desc triose-phosphate isomerase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tim;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00419 evalue:7.5e-65 score:218.1 best_domain_score:217.9 name:TIGR00419;
39730 40557 CDS
ID metaerg.pl|08275
allec_ids 1.1.1.330;
allgo_ids GO:0005789; GO:0016021; GO:0102339; GO:0102340; GO:0102342; GO:0102341; GO:0004303; GO:0006703; GO:0006633;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Rhodanobacter;s__Rhodanobacter sp001617365;
genomedb_acc GCF_001617365.1;
genomedb_target db:genomedb|GCF_001617365.1|WP_068090426.1 8 272 evalue:1.1e-76 qcov:96.40 identity:57.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2.8e-42 score:143.6 best_domain_score:143.3 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2e-32 score:111.9 best_domain_score:111.6 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:8.7e-13 score:47.8 best_domain_score:47.3 name:KR;
sprot_desc Very-long-chain 3-oxoacyl-CoA reductase;
sprot_id sp|O57314|DHB12_ANAPL;
sprot_target db:uniprot_sprot|sp|O57314|DHB12_ANAPL 13 272 evalue:2.8e-21 qcov:94.50 identity:29.50;
41833 40592 CDS
ID metaerg.pl|08276
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Dokdonella;s__Dokdonella sp002297645;
genomedb_acc GCA_002297645.1;
genomedb_target db:genomedb|GCA_002297645.1|DBMH01000134.1_8 2 407 evalue:2.2e-132 qcov:98.30 identity:58.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00890; PF03486;
pfam_desc FAD binding domain; HI0933-like protein;
pfam_id FAD_binding_2; HI0933_like;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:2e-06 score:26.4 best_domain_score:23.4 name:FAD_binding_2; db:Pfam-A.hmm|PF03486.14 evalue:3.5e-105 score:351.3 best_domain_score:351.1 name:HI0933_like;
sprot_desc hypothetical protein;
sprot_id sp|Q795R8|YTFP_BACSU;
sprot_target db:uniprot_sprot|sp|Q795R8|YTFP_BACSU 1 408 evalue:5.4e-29 qcov:98.80 identity:26.10;
tigrfam_acc TIGR00275; TIGR03862;
tigrfam_desc flavoprotein, HI0933 family; flavoprotein, TIGR03862 family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00275; flavo_PP4765;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00275 evalue:4.1e-90 score:301.6 best_domain_score:301.3 name:TIGR00275; db:TIGRFAMs.hmm|TIGR03862 evalue:1e-151 score:504.2 best_domain_score:504.0 name:TIGR03862;
42211 42765 CDS
ID metaerg.pl|08277
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
43328 42756 CDS
ID metaerg.pl|08278
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__UBA2363;g__UBA2363;s__UBA2363 sp002344355;
genomedb_acc GCA_002344355.1;
genomedb_target db:genomedb|GCA_002344355.1|DDTN01000021.1_30 11 188 evalue:4.1e-17 qcov:93.70 identity:37.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF11006;
pfam_desc Protein of unknown function (DUF2845);
pfam_id DUF2845;
pfam_target db:Pfam-A.hmm|PF11006.8 evalue:2.9e-26 score:90.6 best_domain_score:57.0 name:DUF2845;
sp YES;
tm_num 1;
42756 42818 signal_peptide
ID metaerg.pl|08279
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
43328 42756 transmembrane_helix
ID metaerg.pl|08280
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i42759-42812o;
43456 44061 CDS
ID metaerg.pl|08281
allgo_ids GO:0042597;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169835.1 4 201 evalue:3.0e-71 qcov:98.50 identity:66.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF04264;
pfam_desc YceI-like domain;
pfam_id YceI;
pfam_target db:Pfam-A.hmm|PF04264.13 evalue:5e-36 score:123.7 best_domain_score:123.4 name:YceI;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|A4VRG3|Y3941_PSEU5;
sprot_target db:uniprot_sprot|sp|A4VRG3|Y3941_PSEU5 34 200 evalue:1.8e-46 qcov:83.10 identity:50.90;
43456 43515 signal_peptide
ID metaerg.pl|08282
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
45510 44134 CDS
ID metaerg.pl|08283
allec_ids 3.4.-.-;
allgo_ids GO:0006508; GO:0008237; GO:0005737;
allko_ids K03592;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169832.1 7 456 evalue:1.0e-178 qcov:98.30 identity:72.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF01523;
pfam_desc Putative modulator of DNA gyrase;
pfam_id PmbA_TldD;
pfam_target db:Pfam-A.hmm|PF01523.16 evalue:1.5e-49 score:168.6 best_domain_score:168.3 name:PmbA_TldD;
sprot_desc Metalloprotease PmbA;
sprot_id sp|P0AFK1|PMBA_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFK1|PMBA_ECO57 12 456 evalue:1.6e-103 qcov:97.20 identity:45.40;
46940 45510 CDS
ID metaerg.pl|08284
allec_ids 3.4.-.-;
allgo_ids GO:0006508; GO:0008237;
allko_ids K03568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724646.1 1 475 evalue:4.6e-227 qcov:99.80 identity:84.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF01523;
pfam_desc Putative modulator of DNA gyrase;
pfam_id PmbA_TldD;
pfam_target db:Pfam-A.hmm|PF01523.16 evalue:8.6e-65 score:218.6 best_domain_score:218.1 name:PmbA_TldD;
sprot_desc Metalloprotease TldD;
sprot_id sp|P0AGG9|TLDD_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AGG9|TLDD_ECOL6 4 476 evalue:2.3e-156 qcov:99.40 identity:60.00;
50683 46997 CDS
ID metaerg.pl|08285
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724645.1 1 1228 evalue:0.0e+00 qcov:100.00 identity:51.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF13502; PF13116;
pfam_desc AsmA-like C-terminal region; Protein of unknown function;
pfam_id AsmA_2; DUF3971;
pfam_target db:Pfam-A.hmm|PF13502.6 evalue:5.8e-50 score:169.2 best_domain_score:164.2 name:AsmA_2; db:Pfam-A.hmm|PF13116.6 evalue:1.3e-22 score:79.9 best_domain_score:76.4 name:DUF3971;
sp YES;
tigrfam_acc TIGR02099;
tigrfam_desc TIGR02099 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR02099;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR02099 evalue:6.3e-166 score:553.2 best_domain_score:553.0 name:TIGR02099;
tm_num 1;
46997 47059 signal_peptide
ID metaerg.pl|08286
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
50683 46997 transmembrane_helix
ID metaerg.pl|08287
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i47000-47068o;
52212 50740 CDS
ID metaerg.pl|08288
allec_ids 3.1.26.-; 3.1.4.-;
allgo_ids GO:0003723; GO:0005737; GO:0005856; GO:0004519; GO:0046872; GO:0004540; GO:0007049; GO:0051301; GO:0006396;
allko_ids K08301;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724644.1 1 490 evalue:6.8e-234 qcov:100.00 identity:83.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF10150; PF00575;
pfam_desc Ribonuclease E/G family; S1 RNA binding domain;
pfam_id RNase_E_G; S1;
pfam_target db:Pfam-A.hmm|PF10150.9 evalue:3.4e-96 score:321.0 best_domain_score:320.0 name:RNase_E_G; db:Pfam-A.hmm|PF00575.23 evalue:4.7e-05 score:22.9 best_domain_score:21.5 name:S1;
sprot_desc Ribonuclease G;
sprot_id sp|P0A9J2|RNG_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9J2|RNG_ECO57 1 490 evalue:4.6e-144 qcov:100.00 identity:53.50;
tigrfam_acc TIGR00757;
tigrfam_desc ribonuclease, Rne/Rng family;
tigrfam_mainrole Transcription;
tigrfam_name RNaseEG;
tigrfam_sub1role Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00757 evalue:2.1e-150 score:500.5 best_domain_score:500.2 name:TIGR00757;
52396 54063 CDS
ID metaerg.pl|08289
allec_ids 3.6.3.41;
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0019843; GO:0000049; GO:0045900; GO:0006412;
allko_ids K02000; K10539; K02023; K10542; K01990; K02193; K02013; K09687; K05816; K10562; K10111; K01998; K10545; K02049; K02065; K01995; K11072; K02045; K10441; K01996; K02071; K06861; K10820; K05776; K02017; K02032; K02074; K02052; K02006; K05847; K02056; K02010; K09817; K02003; K01997; K06020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724562.1 1 555 evalue:4.8e-292 qcov:100.00 identity:89.90;
kegg_pathway_id 00910; 02010;
kegg_pathway_name Nitrogen metabolism; ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF13304; PF00005; PF12848;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; ABC transporter;
pfam_id AAA_21; ABC_tran; ABC_tran_Xtn;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.8e-14 score:53.5 best_domain_score:18.5 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.6e-53 score:180.1 best_domain_score:89.0 name:ABC_tran; db:Pfam-A.hmm|PF12848.7 evalue:1.8e-14 score:52.7 best_domain_score:47.9 name:ABC_tran_Xtn;
sprot_desc Energy-dependent translational throttle protein EttA;
sprot_id sp|P45127|ETTA_HAEIN;
sprot_target db:uniprot_sprot|sp|P45127|ETTA_HAEIN 2 554 evalue:8.7e-216 qcov:99.60 identity:66.80;
tigrfam_acc TIGR01189; TIGR03719;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA; ATP-binding cassette protein, ChvD family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA; ABC_ABC_ChvD;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:7.7e-41 score:139.1 best_domain_score:66.5 name:TIGR01189; db:TIGRFAMs.hmm|TIGR03719 evalue:1.8e-291 score:966.7 best_domain_score:966.5 name:TIGR03719;
54165 54668 CDS
ID metaerg.pl|08290
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724561.1 1 161 evalue:9.1e-21 qcov:96.40 identity:40.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
sp YES;
54165 54224 lipoprotein_signal_peptide
ID metaerg.pl|08291
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
55604 54711 CDS
ID metaerg.pl|08292
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724560.1 26 297 evalue:8.7e-83 qcov:91.60 identity:57.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
56431 55544 CDS
ID metaerg.pl|08293
allgo_ids GO:0016757;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724559.1 12 295 evalue:2.0e-108 qcov:96.30 identity:66.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00535; PF13641; PF13506; PF13632;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family 21; Glycosyl transferase family group 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3; Glyco_transf_21; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.4e-15 score:56.7 best_domain_score:56.3 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:2.1e-15 score:56.4 best_domain_score:55.4 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13506.6 evalue:6.3e-08 score:31.5 best_domain_score:29.1 name:Glyco_transf_21; db:Pfam-A.hmm|PF13632.6 evalue:3.2e-12 score:46.0 best_domain_score:44.1 name:Glyco_trans_2_3;
tm_num 1;
56431 55544 transmembrane_helix
ID metaerg.pl|08294
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology o56363-56422i;
57292 56438 CDS
ID metaerg.pl|08295
allgo_ids GO:0008168;
allko_ids K00568; K00599; K03183;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724558.1 1 280 evalue:9.5e-103 qcov:98.60 identity:67.10;
kegg_pathway_id 00380; 00340; 00150; 00350; 00130; 00450; 00626;
kegg_pathway_name Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism; Tyrosine metabolism; Ubiquinone biosynthesis; Selenoamino acid metabolism; Naphthalene and anthracene degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF02353; PF08241; PF08242; PF13489; PF13649; PF13847; PF05175; PF01209;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain; ubiE/COQ5 methyltransferase family;
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; MTS; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:5.1e-07 score:28.5 best_domain_score:27.9 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:9.7e-24 score:83.1 best_domain_score:82.2 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.4e-13 score:50.6 best_domain_score:49.8 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:8.9e-17 score:60.6 best_domain_score:60.2 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:2.7e-22 score:78.5 best_domain_score:77.5 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:8.4e-23 score:80.1 best_domain_score:79.7 name:Methyltransf_31; db:Pfam-A.hmm|PF05175.14 evalue:9.4e-06 score:24.5 best_domain_score:23.7 name:MTS; db:Pfam-A.hmm|PF01209.18 evalue:1.4e-07 score:30.3 best_domain_score:29.6 name:Ubie_methyltran;
58210 57401 CDS
ID metaerg.pl|08296
allko_ids K00710;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724557.1 1 267 evalue:4.1e-108 qcov:99.30 identity:70.00;
kegg_pathway_id 01030;
kegg_pathway_name Glycan structures - biosynthesis 1;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00535; PF13641;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.7e-17 score:63.0 best_domain_score:62.2 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:2.1e-14 score:53.2 best_domain_score:52.2 name:Glyco_tranf_2_3;
59388 58207 CDS
ID metaerg.pl|08297
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0015774;
allko_ids K09691; K01995; K09693; K02006;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724556.1 1 390 evalue:7.3e-154 qcov:99.20 identity:70.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:2.9e-18 score:65.9 best_domain_score:64.8 name:ABC_tran;
sprot_desc O-antigen export system ATP-binding protein RfbB;
sprot_id sp|Q50863|RFBB_MYXXA;
sprot_target db:uniprot_sprot|sp|Q50863|RFBB_MYXXA 42 390 evalue:5.6e-52 qcov:88.80 identity:35.80;
60176 59385 CDS
ID metaerg.pl|08298
allgo_ids GO:0016020; GO:0043190; GO:0015774; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724555.1 6 263 evalue:1.5e-70 qcov:98.10 identity:55.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF01061;
pfam_desc ABC-2 type transporter;
pfam_id ABC2_membrane;
pfam_target db:Pfam-A.hmm|PF01061.24 evalue:2.4e-16 score:59.0 best_domain_score:59.0 name:ABC2_membrane;
sprot_desc O-antigen export system permease protein RfbA;
sprot_id sp|Q48475|RFBA1_KLEPN;
sprot_target db:uniprot_sprot|sp|Q48475|RFBA1_KLEPN 11 263 evalue:4.1e-14 qcov:96.20 identity:25.80;
tm_num 6;
60176 59385 transmembrane_helix
ID metaerg.pl|08299
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i59481-59549o59577-59630i59733-59801o59829-59897i59916-59984o60081-60140i;
61241 60264 CDS
ID metaerg.pl|08300
allgo_ids GO:0003755;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724554.1 23 302 evalue:7.3e-59 qcov:86.20 identity:44.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00639; PF13145; PF13616;
pfam_desc PPIC-type PPIASE domain; PPIC-type PPIASE domain; PPIC-type PPIASE domain;
pfam_id Rotamase; Rotamase_2; Rotamase_3;
pfam_target db:Pfam-A.hmm|PF00639.21 evalue:2.8e-18 score:65.9 best_domain_score:65.0 name:Rotamase; db:Pfam-A.hmm|PF13145.6 evalue:1.1e-08 score:35.2 best_domain_score:34.4 name:Rotamase_2; db:Pfam-A.hmm|PF13616.6 evalue:7.3e-15 score:54.8 best_domain_score:54.1 name:Rotamase_3;
sp YES;
60264 60332 signal_peptide
ID metaerg.pl|08301
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
62314 61241 CDS
ID metaerg.pl|08302
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724553.1 87 336 evalue:8.4e-24 qcov:70.00 identity:31.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
sp YES;
61241 61300 signal_peptide
ID metaerg.pl|08303
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
64208 62547 CDS
ID metaerg.pl|08304
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724552.1 10 546 evalue:1.3e-143 qcov:97.10 identity:52.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
sp YES;
62547 62624 signal_peptide
ID metaerg.pl|08305
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
64820 64332 CDS
ID metaerg.pl|08306
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
sp YES;
64332 64445 lipoprotein_signal_peptide
ID metaerg.pl|08307
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
67009 64817 CDS
ID metaerg.pl|08308
allgo_ids GO:0009306; GO:0009279; GO:0016021; GO:0015627; GO:0015628;
allko_ids K02453;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169369.1 1 727 evalue:4.6e-287 qcov:99.60 identity:70.80;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00263; PF03958;
pfam_desc Bacterial type II and III secretion system protein; Bacterial type II/III secretion system short domain;
pfam_id Secretin; Secretin_N;
pfam_target db:Pfam-A.hmm|PF00263.21 evalue:1.8e-47 score:160.4 best_domain_score:160.4 name:Secretin; db:Pfam-A.hmm|PF03958.17 evalue:2.8e-25 score:87.7 best_domain_score:40.4 name:Secretin_N;
sp YES;
sprot_desc Secretin XpsD;
sprot_id sp|P29041|GSPD_XANCP;
sprot_target db:uniprot_sprot|sp|P29041|GSPD_XANCP 24 726 evalue:1.9e-125 qcov:96.30 identity:37.30;
tigrfam_acc TIGR02517;
tigrfam_desc type II secretion system protein D;
tigrfam_mainrole Protein fate;
tigrfam_name type_II_gspD;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02517 evalue:2.3e-137 score:458.2 best_domain_score:458.0 name:TIGR02517;
tm_num 1;
64817 64900 lipoprotein_signal_peptide
ID metaerg.pl|08309
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
67009 64817 transmembrane_helix
ID metaerg.pl|08310
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i64853-64912o;
67800 67009 CDS
ID metaerg.pl|08311
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724549.1 1 263 evalue:5.4e-60 qcov:100.00 identity:57.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
sp YES;
tm_num 1;
67009 67113 signal_peptide
ID metaerg.pl|08312
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
67800 67009 transmembrane_helix
ID metaerg.pl|08313
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i67042-67110o;
68411 67797 CDS
ID metaerg.pl|08314
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724548.1 1 196 evalue:2.4e-76 qcov:96.10 identity:74.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF10741;
pfam_desc Type II secretion system (T2SS), protein M subtype b;
pfam_id T2SSM_b;
pfam_target db:Pfam-A.hmm|PF10741.9 evalue:1.4e-21 score:75.6 best_domain_score:74.5 name:T2SSM_b;
tm_num 1;
68411 67797 transmembrane_helix
ID metaerg.pl|08315
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i67833-67901o;
69546 68383 CDS
ID metaerg.pl|08316
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724547.1 4 387 evalue:1.7e-142 qcov:99.20 identity:67.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF05137;
pfam_desc Fimbrial assembly protein (PilN);
pfam_id PilN;
pfam_target db:Pfam-A.hmm|PF05137.13 evalue:6.5e-07 score:28.6 best_domain_score:25.7 name:PilN;
tm_num 1;
69546 68383 transmembrane_helix
ID metaerg.pl|08317
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i69058-69126o;
70436 69543 CDS
ID metaerg.pl|08318
allgo_ids GO:0009306; GO:0016021; GO:0005886;
allko_ids K02460;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724546.1 6 296 evalue:2.0e-127 qcov:98.00 identity:75.10;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF03934;
pfam_desc Type II secretion system (T2SS), protein K;
pfam_id T2SSK;
pfam_target db:Pfam-A.hmm|PF03934.13 evalue:2.7e-36 score:124.6 best_domain_score:124.3 name:T2SSK;
sprot_desc Type II secretion system protein K;
sprot_id sp|P34026|GSPK_XANCP;
sprot_target db:uniprot_sprot|sp|P34026|GSPK_XANCP 4 292 evalue:1.9e-36 qcov:97.30 identity:36.10;
tm_num 1;
70436 69543 transmembrane_helix
ID metaerg.pl|08319
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i69576-69644o;
71164 70436 CDS
ID metaerg.pl|08320
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724545.1 10 242 evalue:7.9e-74 qcov:96.30 identity:60.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF07963;
pfam_desc Prokaryotic N-terminal methylation motif;
pfam_id N_methyl;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:1.1e-09 score:36.7 best_domain_score:36.0 name:N_methyl;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:9e-08 score:30.8 best_domain_score:30.1 name:TIGR02532;
tm_num 1;
71164 70436 transmembrane_helix
ID metaerg.pl|08321
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i70493-70561o;
71655 71170 CDS
ID metaerg.pl|08322
allgo_ids GO:0015627; GO:0015628;
allko_ids K02458;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724544.1 25 160 evalue:3.7e-43 qcov:84.50 identity:64.00;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF07963;
pfam_desc Prokaryotic N-terminal methylation motif;
pfam_id N_methyl;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:2.8e-09 score:35.4 best_domain_score:34.7 name:N_methyl;
sprot_desc Type II secretion system protein I;
sprot_id sp|P31738|GSPI_XANCP;
sprot_target db:uniprot_sprot|sp|P31738|GSPI_XANCP 24 149 evalue:2.0e-11 qcov:78.30 identity:38.20;
tigrfam_acc TIGR02532;
tigrfam_desc prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Protein fate;
tigrfam_name IV_pilin_GFxxxE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02532 evalue:1.7e-05 score:23.6 best_domain_score:22.8 name:TIGR02532;
tm_num 1;
71655 71170 transmembrane_helix
ID metaerg.pl|08323
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i71254-71322o;
72149 71652 CDS
ID metaerg.pl|08324
allgo_ids GO:0008565; GO:0015627; GO:0015628;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724543.1 20 164 evalue:5.0e-56 qcov:87.90 identity:77.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF12019;
pfam_desc Type II transport protein GspH;
pfam_id GspH;
pfam_target db:Pfam-A.hmm|PF12019.8 evalue:2.9e-07 score:30.1 best_domain_score:29.6 name:GspH;
tigrfam_acc TIGR01708; TIGR02532;
tigrfam_desc type II secretion system protein H; prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Cellular processes; Protein fate;
tigrfam_name typeII_sec_gspH; IV_pilin_GFxxxE;
tigrfam_sub1role Pathogenesis; Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01708 evalue:3.2e-14 score:52.2 best_domain_score:51.6 name:TIGR01708; db:TIGRFAMs.hmm|TIGR02532 evalue:0.00037 score:19.4 best_domain_score:18.7 name:TIGR02532;
tm_num 1;
72149 71652 transmembrane_helix
ID metaerg.pl|08325
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i71712-71780o;
72608 72159 CDS
ID metaerg.pl|08326
allgo_ids GO:0015627; GO:0015628;
allko_ids K02456;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724542.1 19 149 evalue:1.2e-40 qcov:87.90 identity:63.40;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF07963; PF08334;
pfam_desc Prokaryotic N-terminal methylation motif; Type II secretion system (T2SS), protein G;
pfam_id N_methyl; T2SSG;
pfam_target db:Pfam-A.hmm|PF07963.12 evalue:5.1e-07 score:28.2 best_domain_score:27.8 name:N_methyl; db:Pfam-A.hmm|PF08334.11 evalue:4.5e-30 score:103.2 best_domain_score:102.9 name:T2SSG;
sprot_desc Type II secretion system protein G;
sprot_id sp|P31734|GSPG_XANCP;
sprot_target db:uniprot_sprot|sp|P31734|GSPG_XANCP 6 146 evalue:7.1e-24 qcov:94.60 identity:38.30;
tigrfam_acc TIGR01710; TIGR02532;
tigrfam_desc type II secretion system protein G; prepilin-type N-terminal cleavage/methylation domain;
tigrfam_mainrole Cellular processes; Protein fate;
tigrfam_name typeII_sec_gspG; IV_pilin_GFxxxE;
tigrfam_sub1role Pathogenesis; Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01710 evalue:1.3e-34 score:118.3 best_domain_score:118.1 name:TIGR01710; db:TIGRFAMs.hmm|TIGR02532 evalue:4.6e-07 score:28.6 best_domain_score:28.2 name:TIGR02532;
tm_num 1;
72608 72159 transmembrane_helix
ID metaerg.pl|08327
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i72219-72287o;
73954 72743 CDS
ID metaerg.pl|08328
allgo_ids GO:0016021; GO:0005886; GO:0015628;
allko_ids K02455;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724541.1 1 403 evalue:1.9e-181 qcov:100.00 identity:82.10;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00482;
pfam_desc Type II secretion system (T2SS), protein F;
pfam_id T2SSF;
pfam_target db:Pfam-A.hmm|PF00482.23 evalue:1.5e-59 score:198.6 best_domain_score:106.3 name:T2SSF;
sprot_desc Type II secretion system protein F;
sprot_id sp|P31744|GSPF_XANCP;
sprot_target db:uniprot_sprot|sp|P31744|GSPF_XANCP 1 354 evalue:1.9e-79 qcov:87.80 identity:47.20;
tm_num 3;
73954 72743 transmembrane_helix
ID metaerg.pl|08329
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i73247-73315o73403-73456i73868-73936o;
75722 73968 CDS
ID metaerg.pl|08330
allgo_ids GO:0005737; GO:0005886; GO:0015627; GO:0005524; GO:0016887; GO:0042802; GO:0015628;
allko_ids K02454;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169368.1 1 584 evalue:5.5e-291 qcov:100.00 identity:88.00;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00437; PF05157;
pfam_desc Type II/IV secretion system protein; Type II secretion system (T2SS), protein E, N-terminal domain;
pfam_id T2SSE; T2SSE_N;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:4.8e-86 score:287.4 best_domain_score:286.8 name:T2SSE; db:Pfam-A.hmm|PF05157.15 evalue:4.1e-16 score:58.5 best_domain_score:56.4 name:T2SSE_N;
sprot_desc Type II secretion system protein E;
sprot_id sp|P31742|GSPE_XANCP;
sprot_target db:uniprot_sprot|sp|P31742|GSPE_XANCP 27 584 evalue:4.3e-197 qcov:95.50 identity:65.30;
tigrfam_acc TIGR02533;
tigrfam_desc type II secretion system protein E;
tigrfam_mainrole Cellular processes;
tigrfam_name type_II_gspE;
tigrfam_sub1role Pathogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR02533 evalue:1.2e-198 score:659.9 best_domain_score:659.7 name:TIGR02533;
76479 75814 CDS
ID metaerg.pl|08331
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724540.1 10 219 evalue:4.4e-63 qcov:95.00 identity:60.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
tm_num 4;
76479 75814 transmembrane_helix
ID metaerg.pl|08332
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i75919-75987o76150-76209i76228-76281o76363-76431i;
80351 76512 CDS
ID metaerg.pl|08333
allec_ids 6.3.5.3;
allgo_ids GO:0005737; GO:0005524; GO:0046872; GO:0004642; GO:0006189; GO:0006541;
allko_ids K01952;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724539.1 3 1278 evalue:0.0e+00 qcov:99.80 identity:70.80;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
metacyc_pathway_id PWY-841; PWY-6277; PRPP-PWY; PWY-6122; DENOVOPURINE2-PWY; PWY-6121;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis I;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;; 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis I;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;; Super-Pathways;; AIR-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;;
pfam_acc PF02769; PF18072; PF18076; PF13507;
pfam_desc AIR synthase related protein, C-terminal domain; Formylglycinamide ribonucleotide amidotransferase linker domain; Formylglycinamide ribonucleotide amidotransferase N-terminal; CobB/CobQ-like glutamine amidotransferase domain;
pfam_id AIRS_C; FGAR-AT_linker; FGAR-AT_N; GATase_5;
pfam_target db:Pfam-A.hmm|PF02769.22 evalue:3e-48 score:163.1 best_domain_score:108.9 name:AIRS_C; db:Pfam-A.hmm|PF18072.1 evalue:5.3e-23 score:80.5 best_domain_score:78.4 name:FGAR-AT_linker; db:Pfam-A.hmm|PF18076.1 evalue:6.6e-19 score:67.2 best_domain_score:66.3 name:FGAR-AT_N; db:Pfam-A.hmm|PF13507.6 evalue:1.3e-96 score:321.9 best_domain_score:321.4 name:GATase_5;
sprot_desc Phosphoribosylformylglycinamidine synthase;
sprot_id sp|Q1D9V4|PUR4_MYXXD;
sprot_target db:uniprot_sprot|sp|Q1D9V4|PUR4_MYXXD 1 1278 evalue:0.0e+00 qcov:99.90 identity:54.20;
tigrfam_acc TIGR01735;
tigrfam_desc phosphoribosylformylglycinamidine synthase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name FGAM_synt;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01735 evalue:0 score:1650.0 best_domain_score:1649.9 name:TIGR01735;
81203 80469 CDS
ID metaerg.pl|08334
allgo_ids GO:0042597; GO:0045454;
allko_ids K03981;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724538.1 1 241 evalue:8.7e-89 qcov:98.80 identity:68.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF10411; PF13098; PF13462;
pfam_desc Disulfide bond isomerase protein N-terminus; Thioredoxin-like domain; Thioredoxin;
pfam_id DsbC_N; Thioredoxin_2; Thioredoxin_4;
pfam_target db:Pfam-A.hmm|PF10411.9 evalue:2.6e-17 score:61.2 best_domain_score:60.5 name:DsbC_N; db:Pfam-A.hmm|PF13098.6 evalue:1.4e-24 score:85.8 best_domain_score:85.2 name:Thioredoxin_2; db:Pfam-A.hmm|PF13462.6 evalue:5.1e-07 score:29.2 best_domain_score:17.3 name:Thioredoxin_4;
sp YES;
sprot_desc Thiol:disulfide interchange protein DsbC;
sprot_id sp|P0AEG7|DSBC_ECO57;
sprot_target db:uniprot_sprot|sp|P0AEG7|DSBC_ECO57 12 235 evalue:5.1e-35 qcov:91.80 identity:33.90;
80469 80534 signal_peptide
ID metaerg.pl|08335
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
82245 81304 CDS
ID metaerg.pl|08336
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0005737; GO:0009037; GO:0007049; GO:0051301; GO:0007059; GO:0006313;
allko_ids K04763;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169367.1 9 313 evalue:2.6e-101 qcov:97.40 identity:61.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF00589; PF02899;
pfam_desc Phage integrase family; Phage integrase, N-terminal SAM-like domain;
pfam_id Phage_integrase; Phage_int_SAM_1;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:7.8e-42 score:142.2 best_domain_score:141.8 name:Phage_integrase; db:Pfam-A.hmm|PF02899.17 evalue:1.1e-14 score:53.8 best_domain_score:53.8 name:Phage_int_SAM_1;
sprot_desc Tyrosine recombinase XerD;
sprot_id sp|Q9HXQ6|XERD_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HXQ6|XERD_PSEAE 25 313 evalue:1.3e-70 qcov:92.30 identity:48.80;
82961 82242 CDS
ID metaerg.pl|08337
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
83432 83887 CDS
ID metaerg.pl|08338
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724528.1 6 148 evalue:3.7e-37 qcov:94.70 identity:58.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF06271;
pfam_desc RDD family;
pfam_id RDD;
pfam_target db:Pfam-A.hmm|PF06271.12 evalue:3.2e-20 score:72.0 best_domain_score:71.7 name:RDD;
tm_num 3;
83432 83887 transmembrane_helix
ID metaerg.pl|08339
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i83519-83578o83606-83674i83744-83812o;
84975 83905 CDS
ID metaerg.pl|08340
allgo_ids GO:0016021;
allko_ids K11720;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169364.1 5 355 evalue:1.1e-105 qcov:98.60 identity:58.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF03739;
pfam_desc Lipopolysaccharide export system permease LptF/LptG;
pfam_id LptF_LptG;
pfam_target db:Pfam-A.hmm|PF03739.14 evalue:7.7e-55 score:185.4 best_domain_score:185.2 name:LptF_LptG;
tigrfam_acc TIGR04408;
tigrfam_desc LPS export ABC transporter permease LptG;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name LptG_lptG;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04408 evalue:6.6e-88 score:293.8 best_domain_score:293.7 name:TIGR04408;
tm_num 6;
84975 83905 transmembrane_helix
ID metaerg.pl|08341
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i83941-84009o84094-84162i84199-84267o84718-84786i84805-84861o84904-84963i;
86045 84975 CDS
ID metaerg.pl|08342
allgo_ids GO:0016021;
allko_ids K07091; K11720;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724526.1 2 356 evalue:3.6e-115 qcov:99.70 identity:62.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF03739;
pfam_desc Lipopolysaccharide export system permease LptF/LptG;
pfam_id LptF_LptG;
pfam_target db:Pfam-A.hmm|PF03739.14 evalue:1.1e-60 score:204.6 best_domain_score:204.3 name:LptF_LptG;
tigrfam_acc TIGR04407;
tigrfam_desc LPS export ABC transporter permease LptF;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name LptF_YjgP;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04407 evalue:3.9e-86 score:288.0 best_domain_score:287.9 name:TIGR04407;
tm_num 6;
86045 84975 transmembrane_helix
ID metaerg.pl|08343
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
topology i85011-85079o85137-85205i85284-85352o85779-85838i85875-85943o85956-86024i;
86176 87672 CDS
ID metaerg.pl|08344
allec_ids 3.4.11.1;
allgo_ids GO:0004177; GO:0005622; GO:0006508; GO:0005737; GO:0030145; GO:0008235;
allko_ids K01259; K01255; K11142;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724525.1 1 498 evalue:9.7e-212 qcov:100.00 identity:74.30;
kegg_pathway_id 00330; 00480;
kegg_pathway_name Arginine and proline metabolism; Glutathione metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
metacyc_pathway_id PWY-6018; PWY-5988;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF00883; PF02789;
pfam_desc Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain;
pfam_id Peptidase_M17; Peptidase_M17_N;
pfam_target db:Pfam-A.hmm|PF00883.21 evalue:1.1e-123 score:411.7 best_domain_score:411.3 name:Peptidase_M17; db:Pfam-A.hmm|PF02789.17 evalue:7.1e-22 score:76.8 best_domain_score:75.0 name:Peptidase_M17_N;
sprot_desc Probable cytosol aminopeptidase;
sprot_id sp|B4SJ73|AMPA_STRM5;
sprot_target db:uniprot_sprot|sp|B4SJ73|AMPA_STRM5 1 491 evalue:8.5e-130 qcov:98.60 identity:51.10;
87815 88216 CDS
ID metaerg.pl|08345
allgo_ids GO:0003677; GO:0003887; GO:0006260;
allko_ids K02339;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724524.1 1 133 evalue:1.0e-51 qcov:100.00 identity:75.20;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.062677; 65.1922; 0.980637; 66.5793; 0.343806;
pfam_acc PF04364;
pfam_desc DNA polymerase III chi subunit, HolC;
pfam_id DNA_pol3_chi;
pfam_target db:Pfam-A.hmm|PF04364.13 evalue:4.2e-24 score:84.5 best_domain_score:84.3 name:DNA_pol3_chi;
>Feature NODE_57_length_88207_cov_36.6018
1 366 CDS
ID metaerg.pl|08346
allgo_ids GO:0009403; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169654.1 1 121 evalue:2.3e-42 qcov:100.00 identity:73.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF02674;
pfam_desc Colicin V production protein;
pfam_id Colicin_V;
pfam_target db:Pfam-A.hmm|PF02674.16 evalue:1.9e-24 score:85.5 best_domain_score:85.3 name:Colicin_V;
tm_num 2;
1 366 transmembrane_helix
ID metaerg.pl|08347
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology o43-111i157-225o;
470 1873 CDS
ID metaerg.pl|08348
allec_ids 2.4.2.14;
allgo_ids GO:0004044; GO:0000287; GO:0006189; GO:0006541; GO:0009116; GO:0009113;
allko_ids K00762; K00764;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725969.1 1 456 evalue:4.2e-233 qcov:97.60 identity:87.90;
kegg_pathway_id 00983; 00251; 00240; 00230;
kegg_pathway_name Drug metabolism - other enzymes; Glutamate metabolism; Pyrimidine metabolism; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-6277; PWY-841; PRPP-PWY; PWY-6122; DENOVOPURINE2-PWY; PWY-6121;
metacyc_pathway_name superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis I;;
metacyc_pathway_type AIR-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; AIR-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;;
pfam_acc PF13522; PF13537;
pfam_desc Glutamine amidotransferase domain; Glutamine amidotransferase domain;
pfam_id GATase_6; GATase_7;
pfam_target db:Pfam-A.hmm|PF13522.6 evalue:7.5e-16 score:57.8 best_domain_score:56.2 name:GATase_6; db:Pfam-A.hmm|PF13537.6 evalue:1e-12 score:47.2 best_domain_score:45.2 name:GATase_7;
sprot_desc Amidophosphoribosyltransferase;
sprot_id sp|Q51342|PUR1_PSEAE;
sprot_target db:uniprot_sprot|sp|Q51342|PUR1_PSEAE 6 459 evalue:8.5e-156 qcov:97.20 identity:62.20;
tigrfam_acc TIGR01134;
tigrfam_desc amidophosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purF;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01134 evalue:6.2e-134 score:446.8 best_domain_score:446.6 name:TIGR01134;
1963 3378 CDS
ID metaerg.pl|08349
allec_ids 4.1.99.3;
allgo_ids GO:0003904; GO:0003677; GO:0071949; GO:0000719; GO:0018298;
allko_ids K01669;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727055.1 3 470 evalue:3.5e-203 qcov:99.40 identity:69.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF00875; PF03441;
pfam_desc DNA photolyase; FAD binding domain of DNA photolyase;
pfam_id DNA_photolyase; FAD_binding_7;
pfam_target db:Pfam-A.hmm|PF00875.18 evalue:1.3e-51 score:174.0 best_domain_score:173.4 name:DNA_photolyase; db:Pfam-A.hmm|PF03441.14 evalue:2.5e-81 score:271.2 best_domain_score:270.5 name:FAD_binding_7;
sprot_desc Deoxyribodipyrimidine photo-lyase;
sprot_id sp|A9CJC9|PHRA_AGRFC;
sprot_target db:uniprot_sprot|sp|A9CJC9|PHRA_AGRFC 2 470 evalue:2.1e-114 qcov:99.60 identity:45.10;
4353 3379 CDS
ID metaerg.pl|08350
allgo_ids GO:0006508; GO:0008233;
allko_ids K01286; K07260;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF02557;
pfam_desc D-alanyl-D-alanine carboxypeptidase;
pfam_id VanY;
pfam_target db:Pfam-A.hmm|PF02557.17 evalue:6.4e-39 score:132.0 best_domain_score:131.2 name:VanY;
4462 4995 CDS
ID metaerg.pl|08351
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
tm_num 1;
4462 4995 transmembrane_helix
ID metaerg.pl|08352
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology i4480-4548o;
5930 5004 CDS
ID metaerg.pl|08353
allec_ids 6.3.1.-;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0016880; GO:0004824; GO:0006430; GO:0071915;
allko_ids K04568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169653.1 6 307 evalue:4.8e-100 qcov:98.10 identity:62.10;
kegg_pathway_id 00300; 00970;
kegg_pathway_name Lysine biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-6471; PWY-6461;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan cross-bridge biosynthesis II (E. faecium);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Cross-Bridge-Biosynthesis;;
pfam_acc PF00152;
pfam_desc tRNA synthetases class II (D, K and N);
pfam_id tRNA-synt_2;
pfam_target db:Pfam-A.hmm|PF00152.20 evalue:2.6e-34 score:118.0 best_domain_score:63.0 name:tRNA-synt_2;
sprot_desc Elongation factor P--(R)-beta-lysine ligase;
sprot_id sp|Q8DCX0|EPMA_VIBVU;
sprot_target db:uniprot_sprot|sp|Q8DCX0|EPMA_VIBVU 6 307 evalue:2.7e-65 qcov:98.10 identity:44.20;
tigrfam_acc TIGR00462;
tigrfam_desc EF-P lysine aminoacylase GenX;
tigrfam_mainrole Unknown function;
tigrfam_name genX;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00462 evalue:3.4e-99 score:331.3 best_domain_score:331.1 name:TIGR00462;
7438 5927 CDS
ID metaerg.pl|08354
allec_ids 3.6.1.11;
allgo_ids GO:0005886; GO:0004309; GO:0008976; GO:0071978; GO:0071977; GO:0006995; GO:0016036; GO:0009247; GO:0009405; GO:0006793; GO:0006798; GO:0009372; GO:0044010;
allko_ids K01524; K01514;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725965.1 1 503 evalue:2.5e-162 qcov:100.00 identity:59.40;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF02541;
pfam_desc Ppx/GppA phosphatase family;
pfam_id Ppx-GppA;
pfam_target db:Pfam-A.hmm|PF02541.16 evalue:3.5e-73 score:245.8 best_domain_score:245.3 name:Ppx-GppA;
sprot_desc Exopolyphosphatase;
sprot_id sp|Q9ZN70|PPX_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9ZN70|PPX_PSEAE 6 495 evalue:2.1e-107 qcov:97.40 identity:44.10;
9569 7431 CDS
ID metaerg.pl|08355
allec_ids 2.7.4.1;
allgo_ids GO:0009358; GO:0005524; GO:0046872; GO:0008976; GO:0006799;
allko_ids K00937;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169652.1 6 708 evalue:0.0e+00 qcov:98.70 identity:84.60;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF13091; PF02503; PF13090; PF17941; PF13089;
pfam_desc PLD-like domain; Polyphosphate kinase middle domain; Polyphosphate kinase C-terminal domain 2; Polyphosphate kinase C-terminal domain 1; Polyphosphate kinase N-terminal domain;
pfam_id PLDc_2; PP_kinase; PP_kinase_C; PP_kinase_C_1; PP_kinase_N;
pfam_target db:Pfam-A.hmm|PF13091.6 evalue:3.8e-13 score:48.7 best_domain_score:34.7 name:PLDc_2; db:Pfam-A.hmm|PF02503.17 evalue:1.1e-66 score:223.5 best_domain_score:221.9 name:PP_kinase; db:Pfam-A.hmm|PF13090.6 evalue:2.3e-63 score:212.0 best_domain_score:207.6 name:PP_kinase_C; db:Pfam-A.hmm|PF17941.1 evalue:8.3e-72 score:239.4 best_domain_score:237.7 name:PP_kinase_C_1; db:Pfam-A.hmm|PF13089.6 evalue:2.1e-35 score:120.5 best_domain_score:119.6 name:PP_kinase_N;
sprot_desc Polyphosphate kinase;
sprot_id sp|Q9PAC7|PPK1_XYLFA;
sprot_target db:uniprot_sprot|sp|Q9PAC7|PPK1_XYLFA 30 707 evalue:2.7e-230 qcov:95.20 identity:60.20;
tigrfam_acc TIGR03705;
tigrfam_desc polyphosphate kinase 1;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name poly_P_kin;
tigrfam_sub1role Phosphorus compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR03705 evalue:2.1e-282 score:937.7 best_domain_score:937.5 name:TIGR03705;
11156 9687 CDS
ID metaerg.pl|08356
allec_ids 3.4.-.-;
allgo_ids GO:0004222; GO:0006508; GO:0016020; GO:0030288; GO:0046872; GO:0003756; GO:0008270; GO:0061077; GO:0043165; GO:0051603;
allko_ids K01423;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169651.1 7 489 evalue:6.3e-163 qcov:98.80 identity:65.30;
kegg_pathway_id 00310; 00780;
kegg_pathway_name Lysine degradation; Biotin metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:1.5e-30 score:105.7 best_domain_score:104.8 name:Peptidase_M48;
sp YES;
sprot_desc Beta-barrel assembly-enhancing protease;
sprot_id sp|P66948|BEPA_ECOLI;
sprot_target db:uniprot_sprot|sp|P66948|BEPA_ECOLI 2 478 evalue:7.5e-46 qcov:97.50 identity:29.20;
tm_num 3;
9687 9755 signal_peptide
ID metaerg.pl|08357
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
11156 9687 transmembrane_helix
ID metaerg.pl|08358
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology i9705-9773o9975-10043i10137-10205o;
11213 11860 CDS
ID metaerg.pl|08359
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF02635;
pfam_desc DsrE/DsrF-like family;
pfam_id DrsE;
pfam_target db:Pfam-A.hmm|PF02635.15 evalue:5.7e-06 score:25.9 best_domain_score:16.9 name:DrsE;
11857 12213 CDS
ID metaerg.pl|08360
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725962.1 15 118 evalue:1.1e-33 qcov:88.10 identity:65.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF04358;
pfam_desc DsrC like protein;
pfam_id DsrC;
pfam_target db:Pfam-A.hmm|PF04358.13 evalue:8.1e-28 score:96.3 best_domain_score:96.1 name:DsrC;
tigrfam_acc TIGR03342;
tigrfam_desc sulfur relay protein, TusE/DsrC/DsvC family;
tigrfam_name dsrC_tusE_dsvC;
tigrfam_target db:TIGRFAMs.hmm|TIGR03342 evalue:2.1e-26 score:91.6 best_domain_score:91.4 name:TIGR03342;
12265 12525 CDS
ID metaerg.pl|08361
allgo_ids GO:0009055; GO:0015035; GO:0045454; GO:0005737; GO:0004362; GO:0034599;
allko_ids K03676;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38229.1 1 84 evalue:1.5e-30 qcov:97.70 identity:75.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF00462; PF13417;
pfam_desc Glutaredoxin; Glutathione S-transferase, N-terminal domain;
pfam_id Glutaredoxin; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00462.24 evalue:6.2e-21 score:73.6 best_domain_score:73.3 name:Glutaredoxin; db:Pfam-A.hmm|PF13417.6 evalue:9.3e-05 score:22.0 best_domain_score:21.8 name:GST_N_3;
sprot_desc Glutaredoxin;
sprot_id sp|Q9HU55|GLRX_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HU55|GLRX_PSEAE 5 85 evalue:2.3e-19 qcov:94.20 identity:50.60;
tigrfam_acc TIGR02181;
tigrfam_desc glutaredoxin 3;
tigrfam_mainrole Energy metabolism;
tigrfam_name GRX_bact;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02181 evalue:6.9e-33 score:111.9 best_domain_score:111.7 name:TIGR02181;
12586 13593 CDS
ID metaerg.pl|08362
allec_ids 1.1.1.41;
allgo_ids GO:0016616; GO:0055114; GO:0005739; GO:0004449; GO:0000287; GO:0051287; GO:0006102; GO:0006099;
allko_ids K00031; K10978; K00030;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725960.1 1 334 evalue:1.1e-161 qcov:99.70 identity:88.00;
kegg_pathway_id 00020; 00720; 00480;
kegg_pathway_name Citrate cycle (TCA cycle); Reductive carboxylate cycle (CO2 fixation); Glutathione metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-6549; PWY-5690; PWY-5464;
metacyc_pathway_name L-glutamine biosynthesis III;; TCA cycle II (plants and fungi);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type GLUTAMINE-SYN;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00180;
pfam_desc Isocitrate/isopropylmalate dehydrogenase;
pfam_id Iso_dh;
pfam_target db:Pfam-A.hmm|PF00180.20 evalue:1.2e-104 score:349.4 best_domain_score:349.2 name:Iso_dh;
sprot_desc Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial;
sprot_id sp|Q8LG77|IDH6_ARATH;
sprot_target db:uniprot_sprot|sp|Q8LG77|IDH6_ARATH 6 334 evalue:1.4e-83 qcov:98.20 identity:49.70;
13828 15042 CDS
ID metaerg.pl|08363
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725959.1 59 398 evalue:5.3e-107 qcov:84.20 identity:56.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
sp YES;
13828 13932 signal_peptide
ID metaerg.pl|08364
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
15229 16419 CDS
ID metaerg.pl|08365
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725958.1 1 386 evalue:9.6e-154 qcov:97.50 identity:77.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:4.3e-67 score:225.8 best_domain_score:224.2 name:AI-2E_transport;
sprot_desc Putative permease PerM homolog;
sprot_id sp|P43969|PERM_HAEIN;
sprot_target db:uniprot_sprot|sp|P43969|PERM_HAEIN 1 379 evalue:1.1e-68 qcov:95.70 identity:38.70;
tm_num 7;
15229 16419 transmembrane_helix
ID metaerg.pl|08366
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology o15286-15390i15427-15495o15787-15855i15976-16044o16072-16140i16159-16227o16255-16323i;
16422 17777 CDS
ID metaerg.pl|08367
allec_ids 5.1.1.23;
allgo_ids GO:0016853; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K23170;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725957.1 9 451 evalue:6.2e-157 qcov:98.20 identity:63.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
sprot_desc UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase;
sprot_id sp|P0DQD8|MURL_XANOM;
sprot_target db:uniprot_sprot|sp|P0DQD8|MURL_XANOM 18 447 evalue:9.9e-85 qcov:95.30 identity:44.00;
17767 19098 CDS
ID metaerg.pl|08368
allec_ids 6.3.2.53; 6.3.2.9;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0004326; GO:0008764; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01928; K01925; K23169;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169650.1 1 443 evalue:2.0e-147 qcov:100.00 identity:61.50;
kegg_pathway_id 00300; 00471; 00550;
kegg_pathway_name Lysine biosynthesis; D-Glutamine and D-glutamate metabolism; Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-6387; PWY-5265; PWY-6385; PWY-6470; PWY-6471; PWY-6386; PEPTIDOGLYCANSYN-PWY;
metacyc_pathway_name UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF08245;
pfam_desc Mur ligase middle domain;
pfam_id Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF08245.12 evalue:1.4e-19 score:70.1 best_domain_score:62.9 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramoyl-L-alanine--L-glutamate ligase;
sprot_id sp|Q8PII9|MURD2_XANAC;
sprot_target db:uniprot_sprot|sp|Q8PII9|MURD2_XANAC 1 430 evalue:9.4e-64 qcov:97.10 identity:36.40;
tigrfam_acc TIGR01087;
tigrfam_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murD;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01087 evalue:1.6e-90 score:303.5 best_domain_score:303.2 name:TIGR01087;
20072 19074 CDS
ID metaerg.pl|08369
allec_ids 2.5.1.90;
allgo_ids GO:0008299; GO:0005829; GO:0042802; GO:0046872; GO:0004659; GO:0016094; GO:0006744;
allko_ids K02523;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725955.1 1 331 evalue:3.3e-139 qcov:99.70 identity:79.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:6.9e-74 score:247.4 best_domain_score:247.0 name:polyprenyl_synt;
sprot_desc Octaprenyl diphosphate synthase;
sprot_id sp|P0AD57|ISPB_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AD57|ISPB_ECOLI 13 330 evalue:3.3e-77 qcov:95.80 identity:49.20;
20203 20658 CDS
ID metaerg.pl|08370
allgo_ids GO:0003697; GO:0006310; GO:0006281; GO:0006260; GO:0051096;
allko_ids K03111;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725954.1 1 151 evalue:4.3e-62 qcov:100.00 identity:82.80;
kegg_pathway_id 03430; 03440; 03030;
kegg_pathway_name Mismatch repair; Homologous recombination; DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF00436;
pfam_desc Single-strand binding protein family;
pfam_id SSB;
pfam_target db:Pfam-A.hmm|PF00436.25 evalue:2.2e-41 score:139.4 best_domain_score:139.2 name:SSB;
sprot_desc Single-stranded DNA-binding protein;
sprot_id sp|Q83EP4|SSB_COXBU;
sprot_target db:uniprot_sprot|sp|Q83EP4|SSB_COXBU 1 116 evalue:3.7e-44 qcov:76.80 identity:69.80;
tigrfam_acc TIGR00621;
tigrfam_desc single-stranded DNA-binding protein;
tigrfam_mainrole DNA metabolism;
tigrfam_name ssb;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00621 evalue:7e-52 score:175.2 best_domain_score:174.4 name:TIGR00621;
20809 21861 CDS
ID metaerg.pl|08371
allec_ids 4.2.1.46;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0008460; GO:0019305; GO:0045226; GO:0009103; GO:0009243;
allko_ids K00356; K01784; K01711; K03953; K00329; K01710;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725953.1 1 346 evalue:7.2e-169 qcov:98.90 identity:81.80;
kegg_pathway_id 00521; 00523; 00520; 05012; 00130; 00190; 00052; 00051; 01055;
kegg_pathway_name Streptomycin biosynthesis; Polyketide sugar unit biosynthesis; Nucleotide sugars metabolism; Parkinson's disease; Ubiquinone biosynthesis; Oxidative phosphorylation; Galactose metabolism; Fructose and mannose metabolism; Biosynthesis of vancomycin group antibiotics;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-3221; OANTIGEN-PWY; ECASYN-PWY; DTDPRHAMSYN-PWY; PWY-6404;
metacyc_pathway_name ; O-antigen building blocks biosynthesis (E. coli);; enterobacterial common antigen biosynthesis;; dTDP-L-rhamnose biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type ; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; dTDP-Sugar-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF01073; PF01370; PF16363; PF07993; PF02719; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; Male sterility protein; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; NAD_binding_4; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:1.9e-14 score:52.6 best_domain_score:52.2 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:9.6e-72 score:240.5 best_domain_score:240.3 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:7.6e-94 score:314.0 best_domain_score:313.8 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF07993.12 evalue:1.8e-14 score:52.8 best_domain_score:45.3 name:NAD_binding_4; db:Pfam-A.hmm|PF02719.15 evalue:1.4e-14 score:53.2 best_domain_score:52.2 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:5.1e-15 score:54.6 best_domain_score:54.3 name:RmlD_sub_bind;
sprot_desc dTDP-glucose 4,6-dehydratase;
sprot_id sp|B0RVL0|RMLB_XANCB;
sprot_target db:uniprot_sprot|sp|B0RVL0|RMLB_XANCB 1 344 evalue:1.4e-123 qcov:98.30 identity:62.10;
tigrfam_acc TIGR01181;
tigrfam_desc dTDP-glucose 4,6-dehydratase;
tigrfam_mainrole Cell envelope;
tigrfam_name dTDP_gluc_dehyt;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01181 evalue:1.1e-146 score:487.2 best_domain_score:487.0 name:TIGR01181;
21858 22742 CDS
ID metaerg.pl|08372
allec_ids 2.7.7.24;
allgo_ids GO:0009058; GO:0016779; GO:0008879; GO:0046872; GO:0019305; GO:0045226; GO:0009243;
allko_ids K00972; K11528; K00966; K01840; K00963; K02536; K04042; K00640; K00677; K00975; K00973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725952.1 1 289 evalue:4.2e-146 qcov:98.30 identity:86.90;
kegg_pathway_id 00521; 00500; 00272; 00540; 00523; 00520; 00920; 00040; 00530; 00052; 00051;
kegg_pathway_name Streptomycin biosynthesis; Starch and sucrose metabolism; Cysteine metabolism; Lipopolysaccharide biosynthesis; Polyketide sugar unit biosynthesis; Nucleotide sugars metabolism; Sulfur metabolism; Pentose and glucuronate interconversions; Aminosugars metabolism; Galactose metabolism; Fructose and mannose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-6404; ECASYN-PWY; DTDPRHAMSYN-PWY; OANTIGEN-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; enterobacterial common antigen biosynthesis;; dTDP-L-rhamnose biosynthesis;; O-antigen building blocks biosynthesis (E. coli);;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; dTDP-Sugar-Biosynthesis;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;;
pfam_acc PF00483; PF12804;
pfam_desc Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF00483.23 evalue:1.6e-69 score:233.5 best_domain_score:233.2 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:2e-11 score:43.8 best_domain_score:43.4 name:NTP_transf_3;
sprot_desc Glucose-1-phosphate thymidylyltransferase;
sprot_id sp|B0RVK9|RMLA_XANCB;
sprot_target db:uniprot_sprot|sp|B0RVK9|RMLA_XANCB 3 289 evalue:5.6e-121 qcov:97.60 identity:68.60;
tigrfam_acc TIGR01207;
tigrfam_desc glucose-1-phosphate thymidylyltransferase;
tigrfam_mainrole Cell envelope;
tigrfam_name rmlA;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01207 evalue:7.7e-145 score:480.5 best_domain_score:480.3 name:TIGR01207;
22739 23287 CDS
ID metaerg.pl|08373
allec_ids 5.1.3.13;
allgo_ids GO:0008830; GO:0019305; GO:0045226;
allko_ids K01790;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38239.1 1 182 evalue:7.7e-66 qcov:100.00 identity:63.70;
kegg_pathway_id 00523; 00521; 00520;
kegg_pathway_name Polyketide sugar unit biosynthesis; Streptomycin biosynthesis; Nucleotide sugars metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id OANTIGEN-PWY; DTDPRHAMSYN-PWY; PWY-6404;
metacyc_pathway_name O-antigen building blocks biosynthesis (E. coli);; dTDP-L-rhamnose biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; dTDP-Sugar-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF00908;
pfam_desc dTDP-4-dehydrorhamnose 3,5-epimerase;
pfam_id dTDP_sugar_isom;
pfam_target db:Pfam-A.hmm|PF00908.17 evalue:5e-70 score:233.8 best_domain_score:233.6 name:dTDP_sugar_isom;
sprot_desc dTDP-4-dehydrorhamnose 3,5-epimerase;
sprot_id sp|O27818|RMLC_METTH;
sprot_target db:uniprot_sprot|sp|O27818|RMLC_METTH 6 167 evalue:1.8e-45 qcov:89.00 identity:51.50;
tigrfam_acc TIGR01221;
tigrfam_desc dTDP-4-dehydrorhamnose 3,5-epimerase;
tigrfam_mainrole Cell envelope;
tigrfam_name rmlC;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01221 evalue:1e-70 score:236.3 best_domain_score:236.1 name:TIGR01221;
23284 24180 CDS
ID metaerg.pl|08374
allec_ids 1.1.1.133;
allgo_ids GO:0003824; GO:0050662; GO:0005829; GO:0008831; GO:0046872; GO:0019305; GO:0045226; GO:0009103; GO:0009243;
allko_ids K00067;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169649.1 1 293 evalue:3.1e-96 qcov:98.30 identity:59.00;
kegg_pathway_id 00521; 00523; 00520;
kegg_pathway_name Streptomycin biosynthesis; Polyketide sugar unit biosynthesis; Nucleotide sugars metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-6404; OANTIGEN-PWY; DTDPRHAMSYN-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; O-antigen building blocks biosynthesis (E. coli);; dTDP-L-rhamnose biosynthesis;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; dTDP-Sugar-Biosynthesis;;
pfam_acc PF01370; PF16363; PF02719; PF04321;
pfam_desc NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id Epimerase; GDP_Man_Dehyd; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01370.21 evalue:5.7e-15 score:54.7 best_domain_score:54.2 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:5e-09 score:35.2 best_domain_score:33.8 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF02719.15 evalue:3.2e-07 score:29.0 best_domain_score:23.6 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:2.2e-84 score:282.2 best_domain_score:282.0 name:RmlD_sub_bind;
sprot_desc dTDP-4-dehydrorhamnose reductase;
sprot_id sp|P26392|RMLD_SALTY;
sprot_target db:uniprot_sprot|sp|P26392|RMLD_SALTY 1 273 evalue:7.1e-39 qcov:91.60 identity:34.10;
tigrfam_acc TIGR01214;
tigrfam_desc dTDP-4-dehydrorhamnose reductase;
tigrfam_mainrole Cell envelope;
tigrfam_name rmlD;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01214 evalue:3.7e-79 score:264.9 best_domain_score:264.7 name:TIGR01214;
24174 25589 CDS
ID metaerg.pl|08375
allec_ids 5.3.1.8; 2.7.7.13; 5.3.1.8 2.7.7.13;
allgo_ids GO:0005976; GO:0016779; GO:0005525; GO:0004475; GO:0004476; GO:0009298; GO:0009103;
allko_ids K04042; K00971; K01840; K00966; K11528; K01809; K16011;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725949.1 2 470 evalue:3.1e-215 qcov:99.60 identity:79.10;
kegg_pathway_id 00051; 00530;
kegg_pathway_name Fructose and mannose metabolism; Aminosugars metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-5659; COLANSYN-PWY; MANNCAT-PWY; PWY-882;
metacyc_pathway_name GDP-mannose biosynthesis;; colanic acid building blocks biosynthesis;; D-mannose degradation;; L-ascorbate biosynthesis I (L-galactose pathway);;
metacyc_pathway_type GDP-Sugar-Biosynthesis;; Carbohydrates-Biosynthesis; Super-Pathways;; Sugars-And-Polysaccharides-Degradation;; Ascorbate-Biosynthesis;;
pfam_acc PF07883; PF01050; PF00483; PF12804;
pfam_desc Cupin domain; Mannose-6-phosphate isomerase; Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id Cupin_2; MannoseP_isomer; NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF07883.11 evalue:2.6e-09 score:35.9 best_domain_score:34.6 name:Cupin_2; db:Pfam-A.hmm|PF01050.18 evalue:5.6e-57 score:191.1 best_domain_score:190.5 name:MannoseP_isomer; db:Pfam-A.hmm|PF00483.23 evalue:8.6e-55 score:185.2 best_domain_score:183.7 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:1.7e-09 score:37.5 best_domain_score:37.5 name:NTP_transf_3;
sprot_desc Xanthan biosynthesis protein XanB;
sprot_id sp|P0C7J3|XANB_XANCP;
sprot_target db:uniprot_sprot|sp|P0C7J3|XANB_XANCP 2 470 evalue:3.5e-117 qcov:99.60 identity:47.50;
tigrfam_acc TIGR01479;
tigrfam_desc mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;
tigrfam_mainrole Cell envelope;
tigrfam_name GMP_PMI;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01479 evalue:4.8e-164 score:545.7 best_domain_score:545.5 name:TIGR01479;
25576 26511 CDS
ID metaerg.pl|08376
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725948.1 1 303 evalue:2.1e-103 qcov:97.40 identity:60.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF07920;
pfam_desc Protein of unknown function (DUF1684);
pfam_id DUF1684;
pfam_target db:Pfam-A.hmm|PF07920.11 evalue:5.2e-41 score:139.4 best_domain_score:138.4 name:DUF1684;
sp YES;
25576 25638 lipoprotein_signal_peptide
ID metaerg.pl|08377
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
27446 26664 CDS
ID metaerg.pl|08378
allec_ids 4.2.1.116;
allgo_ids GO:0003824; GO:0043956; GO:0006631;
allko_ids K07514; K07515; K01825; K10527; K07511; K00022; K01692; K01715; K01782; K07516; K13816; K15016; K13767; K15019;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725945.1 1 259 evalue:2.5e-110 qcov:99.60 identity:81.90;
kegg_pathway_id 00380; 00632; 00930; 00281; 00280; 00310; 00410; 00592; 00071; 00650; 00640; 00903; 00062; 01040;
kegg_pathway_name Tryptophan metabolism; Benzoate degradation via CoA ligation; Caprolactam degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; beta-Alanine metabolism; alpha-Linolenic acid metabolism; Fatty acid metabolism; Butanoate metabolism; Propanoate metabolism; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-5789; PWY-4221; PWY-5743; PWY-3941;
metacyc_pathway_name 3-hydroxypropanoate/4-hydroxybutanate cycle;; superpathway of coenzyme A biosynthesis II (plants);; 3-hydroxypropanoate cycle;; β-alanine biosynthesis II;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; CoA-Biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;; Beta-Alanine-Biosynthesis;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:2.7e-69 score:232.5 best_domain_score:232.3 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:2.3e-42 score:144.9 best_domain_score:133.8 name:ECH_2;
sprot_desc 3-hydroxypropionyl-coenzyme A dehydratase;
sprot_id sp|A4YI89|HPCD_METS5;
sprot_target db:uniprot_sprot|sp|A4YI89|HPCD_METS5 1 259 evalue:9.8e-61 qcov:99.60 identity:49.80;
27733 27464 CDS
ID metaerg.pl|08379
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
tm_num 2;
27733 27464 transmembrane_helix
ID metaerg.pl|08380
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology i27500-27568o27611-27706i;
28137 27745 CDS
ID metaerg.pl|08381
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169648.1 11 130 evalue:9.2e-45 qcov:92.30 identity:71.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF04024;
pfam_desc PspC domain;
pfam_id PspC;
pfam_target db:Pfam-A.hmm|PF04024.12 evalue:1.3e-16 score:59.3 best_domain_score:58.1 name:PspC;
tigrfam_acc TIGR02978;
tigrfam_desc phage shock protein C;
tigrfam_mainrole Cellular processes;
tigrfam_name phageshock_pspC;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02978 evalue:3.1e-32 score:110.2 best_domain_score:110.0 name:TIGR02978;
tm_num 2;
28137 27745 transmembrane_helix
ID metaerg.pl|08382
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology i27805-27864o27877-27945i;
28397 28134 CDS
ID metaerg.pl|08383
allgo_ids GO:0006355; GO:0009271;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725942.1 16 86 evalue:9.5e-22 qcov:81.60 identity:76.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF06667;
pfam_desc Phage shock protein B;
pfam_id PspB;
pfam_target db:Pfam-A.hmm|PF06667.12 evalue:3.9e-31 score:106.1 best_domain_score:105.9 name:PspB;
tigrfam_acc TIGR02976;
tigrfam_desc phage shock protein B;
tigrfam_mainrole Cellular processes;
tigrfam_name phageshock_pspB;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02976 evalue:9.1e-28 score:95.5 best_domain_score:95.4 name:TIGR02976;
tm_num 1;
28397 28134 transmembrane_helix
ID metaerg.pl|08384
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology o28176-28244i;
29064 28399 CDS
ID metaerg.pl|08385
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725941.1 1 218 evalue:7.6e-92 qcov:98.60 identity:85.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF04012;
pfam_desc PspA/IM30 family;
pfam_id PspA_IM30;
pfam_target db:Pfam-A.hmm|PF04012.12 evalue:2.5e-35 score:121.3 best_domain_score:121.1 name:PspA_IM30;
tigrfam_acc TIGR02977;
tigrfam_desc phage shock protein A;
tigrfam_mainrole Cellular processes;
tigrfam_name phageshock_pspA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02977 evalue:4.8e-82 score:274.1 best_domain_score:273.9 name:TIGR02977;
29405 29202 CDS
ID metaerg.pl|08386
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
29441 30163 CDS
ID metaerg.pl|08387
allec_ids 5.2.1.8;
allgo_ids GO:0006457; GO:0009279; GO:0003755; GO:0009405;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169647.1 1 236 evalue:3.1e-99 qcov:98.30 identity:77.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF00254; PF01346;
pfam_desc FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase;
pfam_id FKBP_C; FKBP_N;
pfam_target db:Pfam-A.hmm|PF00254.28 evalue:3.4e-19 score:68.2 best_domain_score:67.4 name:FKBP_C; db:Pfam-A.hmm|PF01346.18 evalue:2.4e-20 score:72.5 best_domain_score:72.0 name:FKBP_N;
sp YES;
sprot_desc Outer membrane protein MIP;
sprot_id sp|P53605|MIP_LEGLO;
sprot_target db:uniprot_sprot|sp|P53605|MIP_LEGLO 58 225 evalue:5.9e-36 qcov:70.00 identity:45.80;
29441 29500 signal_peptide
ID metaerg.pl|08388
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
30182 30382 CDS
ID metaerg.pl|08389
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727052.1 6 65 evalue:2.2e-18 qcov:90.90 identity:70.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF06945;
pfam_desc Protein of unknown function (DUF1289);
pfam_id DUF1289;
pfam_target db:Pfam-A.hmm|PF06945.13 evalue:1.7e-18 score:65.3 best_domain_score:65.2 name:DUF1289;
30372 30989 CDS
ID metaerg.pl|08390
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725939.1 4 197 evalue:2.4e-47 qcov:94.60 identity:51.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:3.4e-09 score:36.1 best_domain_score:34.8 name:NUDIX;
32488 31013 CDS
ID metaerg.pl|08391
allgo_ids GO:0006812; GO:0015299; GO:0016021; GO:0055085; GO:0005887; GO:0050660; GO:0015386; GO:0006884;
allko_ids K11105;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725938.1 1 491 evalue:2.5e-220 qcov:100.00 identity:84.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF00999; PF02080;
pfam_desc Sodium/hydrogen exchanger family; TrkA-C domain;
pfam_id Na_H_Exchanger; TrkA_C;
pfam_target db:Pfam-A.hmm|PF00999.21 evalue:3.7e-45 score:153.6 best_domain_score:153.3 name:Na_H_Exchanger; db:Pfam-A.hmm|PF02080.21 evalue:3.7e-07 score:29.1 best_domain_score:28.2 name:TrkA_C;
sprot_desc K(+)/H(+) antiporter NhaP2;
sprot_id sp|Q02EZ6|NHAP2_PSEAB;
sprot_target db:uniprot_sprot|sp|Q02EZ6|NHAP2_PSEAB 18 485 evalue:8.8e-79 qcov:95.30 identity:43.10;
tm_num 10;
32488 31013 transmembrane_helix
ID metaerg.pl|08392
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology o31040-31093i31112-31165o31193-31261i31295-31363o31589-31657i31715-31783o31841-31909i31928-31996o32024-32092i32111-32179o;
34398 35780 CDS
ID metaerg.pl|08393
allec_ids 1.2.1.3;
allgo_ids GO:0016491; GO:0055114; GO:0005829; GO:0005783; GO:0042406; GO:0016021; GO:0005634; GO:0004028; GO:0043878; GO:0050061; GO:0052814; GO:0006631; GO:0046292; GO:0046458; GO:0000302;
allko_ids K00128;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725916.1 1 460 evalue:1.6e-197 qcov:100.00 identity:73.70;
kegg_pathway_id 00380; 00120; 00641; 00650; 00640; 00561; 00220; 00903; 00620; 00280; 00310; 00010; 00631; 00410; 00340; 00071;
kegg_pathway_name Tryptophan metabolism; Bile acid biosynthesis; 3-Chloroacrylic acid degradation; Butanoate metabolism; Propanoate metabolism; Glycerolipid metabolism; Urea cycle and metabolism of amino groups; Limonene and pinene degradation; Pyruvate metabolism; Valine, leucine and isoleucine degradation; Lysine degradation; Glycolysis / Gluconeogenesis; 1,2-Dichloroethane degradation; beta-Alanine metabolism; Histidine metabolism; Fatty acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-2221; PWY-0; PWY66-21; PWY-6054; PWY66-161; P221-PWY; PWY66-162; PWY-5760; PWY-2724; NPGLUCAT-PWY; PWY-6575; PWY-6055; PWY-2501; PWY-3981;
metacyc_pathway_name Entner-Doudoroff pathway III (semi-phosphorylative);; putrescine degradation III;; ethanol degradation II;; dimethylsulfoniopropanoate biosynthesis I (Wollastonia);; ethanol degradation III;; octane oxidation;; ethanol degradation IV;; β-alanine biosynthesis IV;; alkane oxidation;; Entner-Doudoroff pathway II (non-phosphorylative);; juvenile hormone III biosynthesis I;; dimethylsulfoniopropanoate biosynthesis II (Spartina);; fatty acid α-oxidation I;; β-alanine biosynthesis I;;
metacyc_pathway_type Entner-Duodoroff-Pathways;; Putrescine-Degradation;; Ethanol-Degradation;; Dimethylsulfoniopropionate-Biosynthesis;; Ethanol-Degradation;; Other-Degradation;; Ethanol-Degradation;; Beta-Alanine-Biosynthesis;; Fatty-Acid-Degradation;; Entner-Duodoroff-Pathways;; HORMONE-SYN; JH-III-Biosynthesis;; Dimethylsulfoniopropionate-Biosynthesis;; Fatty-Acid-Degradation;; Beta-Alanine-Biosynthesis;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:7e-85 score:284.5 best_domain_score:284.2 name:Aldedh;
sprot_desc Aldehyde dehydrogenase family 3 member A2;
sprot_id sp|P30839|AL3A2_RAT;
sprot_target db:uniprot_sprot|sp|P30839|AL3A2_RAT 12 453 evalue:1.3e-116 qcov:96.10 identity:47.30;
35951 36412 CDS
ID metaerg.pl|08394
allko_ids K00457;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725915.1 3 150 evalue:1.0e-63 qcov:96.70 identity:78.40;
kegg_pathway_id 00360; 00350;
kegg_pathway_name Phenylalanine metabolism; Tyrosine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF00903; PF13669;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase; Glyoxalase_4;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:7e-08 score:32.0 best_domain_score:30.2 name:Glyoxalase; db:Pfam-A.hmm|PF13669.6 evalue:2.2e-06 score:27.1 best_domain_score:26.8 name:Glyoxalase_4;
36573 37535 CDS
ID metaerg.pl|08395
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078089170.1 13 319 evalue:7.6e-16 qcov:95.90 identity:22.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
sp YES;
36573 36620 lipoprotein_signal_peptide
ID metaerg.pl|08396
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
37607 38113 CDS
ID metaerg.pl|08397
allgo_ids GO:0015035; GO:0016020; GO:0016021; GO:0005886; GO:0009055;
allko_ids K03611;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169642.1 6 167 evalue:2.0e-60 qcov:96.40 identity:67.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF02600;
pfam_desc Disulfide bond formation protein DsbB;
pfam_id DsbB;
pfam_target db:Pfam-A.hmm|PF02600.16 evalue:2.1e-37 score:128.0 best_domain_score:127.8 name:DsbB;
sprot_desc Disulfide bond formation protein B;
sprot_id sp|A1TXV0|DSBB_MARHV;
sprot_target db:uniprot_sprot|sp|A1TXV0|DSBB_MARHV 15 166 evalue:1.1e-28 qcov:90.50 identity:44.70;
tm_num 4;
37607 38113 transmembrane_helix
ID metaerg.pl|08398
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology i37640-37708o37736-37789i37802-37870o38033-38101i;
38158 39528 CDS
ID metaerg.pl|08399
allec_ids 2.5.1.54;
allgo_ids GO:0003849; GO:0009073; GO:0009423;
allko_ids K01626;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725913.1 1 455 evalue:2.1e-245 qcov:99.80 identity:89.50;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id ARO-PWY; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY; PWY-6164;
metacyc_pathway_name chorismate biosynthesis I;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;; 3-dehydroquinate biosynthesis I;;
metacyc_pathway_type Chorismate-Biosynthesis; Super-Pathways;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; 3-Dehydroquinate-Biosynthesis;;
pfam_acc PF01474;
pfam_desc Class-II DAHP synthetase family;
pfam_id DAHP_synth_2;
pfam_target db:Pfam-A.hmm|PF01474.16 evalue:7.3e-187 score:620.4 best_domain_score:620.3 name:DAHP_synth_2;
sprot_desc Phospho-2-dehydro-3-deoxyheptonate aldolase;
sprot_id sp|P80576|AROF_NEUCR;
sprot_target db:uniprot_sprot|sp|P80576|AROF_NEUCR 6 453 evalue:4.7e-119 qcov:98.20 identity:46.10;
tigrfam_acc TIGR01358;
tigrfam_desc 3-deoxy-7-phosphoheptulonate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name DAHP_synth_II;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01358 evalue:1.1e-198 score:659.4 best_domain_score:659.2 name:TIGR01358;
40668 39691 CDS
ID metaerg.pl|08400
allec_ids 1.1.1.37; 1.1.1.-;
allgo_ids GO:0016616; GO:0055114; GO:0030060; GO:0005975; GO:0006108; GO:0006099;
allko_ids K00024; K00026; K00025;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725912.1 1 325 evalue:9.3e-163 qcov:100.00 identity:88.40;
kegg_pathway_id 00020; 00630; 00710; 00720; 00620;
kegg_pathway_name Citrate cycle (TCA cycle); Glyoxylate and dicarboxylate metabolism; Carbon fixation in photosynthetic organisms; Reductive carboxylate cycle (CO2 fixation); Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-5789; TCA; PWY-481; PWY-882; PWY-5327; P108-PWY; P42-PWY; ECASYN-PWY; PWY-5048; PWY-321; CENTBENZCOA-PWY; PWY-6146; PWY-6516; TCA-GLYOX-BYPASS; PWY-6501; P302-PWY; PWY-5516; PWY-5464; PWY-5972; PWY-5195; GLYOXYLATE-BYPASS; GLUCONEO-PWY; PWY-5913; PWY-6577; TOLSULFDEG-PWY; P105-PWY; PWY-5690; LYSDEGII-PWY; 4TOLCARBDEG-PWY; SUCROSEUTIL2-PWY; PWY-6419; PWY-1186; PWY1A0-6325; ANARESP1-PWY; BENZCOA-PWY; PWY-561; PWY-5197; PWY-5184; PWY-1622; PWY-5392; P23-PWY; MALATE-ASPARTATE-SHUTTLE-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-6575; PWY-5466; FERMENTATION-PWY;
metacyc_pathway_name 3-hydroxypropanoate/4-hydroxybutanate cycle;; TCA cycle I (prokaryotic);; ethylbenzene degradation (anaerobic);; L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of L-lysine degradation;; pyruvate fermentation to propanoate I;; incomplete reductive TCA cycle;; enterobacterial common antigen biosynthesis;; rosmarinic acid biosynthesis I;; cutin biosynthesis;; benzoyl-CoA degradation II (anaerobic);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; superpathway of glyoxylate bypass and TCA;; D-glucuronate degradation II;; L-sorbose degradation;; D-xylose degradation II;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; stearate biosynthesis I (animals and fungi);; artemisinin and arteannuin B biosynthesis;; glyoxylate cycle;; gluconeogenesis I;; partial TCA cycle (obligate autotrophs);; farnesylcysteine salvage pathway;; 4-toluenesulfonate degradation I;; TCA cycle IV (2-oxoglutarate decarboxylase);; TCA cycle II (plants and fungi);; L-lysine degradation III;; 4-toluenecarboxylate degradation;; sucrose degradation VII (sucrose 3-dehydrogenase);; shikimate degradation II;; L-homomethionine biosynthesis;; actinorhodin biosynthesis;; ; anaerobic aromatic compound degradation (Thauera aromatica);; superpathway of glyoxylate cycle and fatty acid degradation;; lactate biosynthesis (archaea);; toluene degradation VI (anaerobic);; formaldehyde assimilation I (serine pathway);; reductive TCA cycle II;; reductive TCA cycle I;; L-aspartate degradation II;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; juvenile hormone III biosynthesis I;; matairesinol biosynthesis;; mixed acid fermentation;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; TCA-VARIANTS;; AROMATIC-COMPOUNDS-DEGRADATION;; Ascorbate-Biosynthesis;; LYSINE-DEG; Super-Pathways;; Pyruvate-Propanoate-Fermentation;; Reductive-TCA-Cycles;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Rosmarinate-Biosynthesis;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; Benzoyl-CoA-Degradation;; Biosynthesis; Super-Pathways;; Sugar-Derivatives; Super-Pathways;; Super-Pathways; TCA-VARIANTS;; D-Glucuronate-Degradation;; Sugars-And-Polysaccharides-Degradation;; Xylose-Degradation;; Energy-Metabolism; Super-Pathways;; Stearate-Biosynthesis;; SESQUITERPENE-LACTONE;; Energy-Metabolism;; Gluconeogenesis;; TCA-VARIANTS;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; 4-Toluenesulfonate-Degradation;; TCA-VARIANTS;; TCA-VARIANTS;; LYSINE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION;; SUCROSE-DEG;; Shikimate-Degradation;; Other-Amino-Acid-Biosynthesis;; Antibiotic-Biosynthesis;; ; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism;; Super-Pathways; TOLUENE-DEG;; Formaldehyde-Assimilation;; Reductive-TCA-Cycles;; Reductive-TCA-Cycles;; ASPARTATE-DEG;; Energy-Metabolism; Super-Pathways;; HORMONE-SYN; JH-III-Biosynthesis;; LIGNAN-SYN;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;;
pfam_acc PF02866; PF00056;
pfam_desc lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain;
pfam_id Ldh_1_C; Ldh_1_N;
pfam_target db:Pfam-A.hmm|PF02866.18 evalue:1.8e-34 score:118.3 best_domain_score:117.4 name:Ldh_1_C; db:Pfam-A.hmm|PF00056.23 evalue:1.7e-32 score:111.7 best_domain_score:111.1 name:Ldh_1_N;
sprot_desc Malate dehydrogenase;
sprot_id sp|Q0VQ52|MDH_ALCBS;
sprot_target db:uniprot_sprot|sp|Q0VQ52|MDH_ALCBS 1 325 evalue:2.5e-130 qcov:100.00 identity:70.50;
tigrfam_acc TIGR01759;
tigrfam_desc malate dehydrogenase;
tigrfam_name MalateDH-SF1;
tigrfam_target db:TIGRFAMs.hmm|TIGR01759 evalue:9.2e-148 score:490.7 best_domain_score:490.5 name:TIGR01759;
40861 41424 CDS
ID metaerg.pl|08401
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725911.1 1 187 evalue:1.5e-69 qcov:100.00 identity:66.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
sp YES;
40861 40917 signal_peptide
ID metaerg.pl|08402
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
42395 41430 CDS
ID metaerg.pl|08403
allec_ids 2.1.1.44;
allgo_ids GO:0030745; GO:0008276; GO:0052704; GO:0052707;
allko_ids K18911;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169900.1 15 315 evalue:4.9e-124 qcov:93.80 identity:73.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF10017;
pfam_desc Histidine-specific methyltransferase, SAM-dependent;
pfam_id Methyltransf_33;
pfam_target db:Pfam-A.hmm|PF10017.9 evalue:2.1e-93 score:312.1 best_domain_score:311.9 name:Methyltransf_33;
sprot_desc Histidine N-alpha-methyltransferase;
sprot_id sp|A0R5M8|EGTD_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R5M8|EGTD_MYCS2 12 309 evalue:1.1e-42 qcov:92.80 identity:36.80;
tigrfam_acc TIGR03438;
tigrfam_desc dimethylhistidine N-methyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name egtD_ergothio;
tigrfam_sub1role Glutathione and analogs;
tigrfam_target db:TIGRFAMs.hmm|TIGR03438 evalue:4e-105 score:350.5 best_domain_score:350.3 name:TIGR03438;
43714 42392 CDS
ID metaerg.pl|08404
allec_ids 1.14.99.50;
allgo_ids GO:0005506; GO:0004497; GO:0016705; GO:0052699;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169641.1 17 439 evalue:1.8e-156 qcov:96.10 identity:60.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF12867; PF03781;
pfam_desc DinB superfamily; Sulfatase-modifying factor enzyme 1;
pfam_id DinB_2; FGE-sulfatase;
pfam_target db:Pfam-A.hmm|PF12867.7 evalue:1.4e-11 score:44.2 best_domain_score:39.0 name:DinB_2; db:Pfam-A.hmm|PF03781.16 evalue:2.5e-32 score:111.7 best_domain_score:73.6 name:FGE-sulfatase;
sprot_desc Hercynine oxygenase;
sprot_id sp|G7CFI3|EGTB_MYCT3;
sprot_target db:uniprot_sprot|sp|G7CFI3|EGTB_MYCT3 39 439 evalue:6.1e-39 qcov:91.10 identity:29.10;
tigrfam_acc TIGR03440;
tigrfam_desc ergothioneine biosynthesis protein EgtB;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name egtB_TIGR03440;
tigrfam_sub1role Glutathione and analogs;
tigrfam_target db:TIGRFAMs.hmm|TIGR03440 evalue:2.3e-166 score:553.4 best_domain_score:553.2 name:TIGR03440;
45230 43809 CDS
ID metaerg.pl|08405
allgo_ids GO:0005524; GO:0016887; GO:0005737; GO:0043565; GO:0008134; GO:0000160; GO:0060491; GO:0006355;
allko_ids K07654; K07682; K03407; K07646; K07641; K07673; K01120; K08475; K07639; K07652; K11354; K07778; K07768; K07711; K07679; K07648; K07651; K07718; K11711; K07642; K00760; K02484; K11356; K11640; K07645; K07708; K07677; K08282; K01937; K11231; K02491; K02668; K03388; K08479; K02489; K07716; K07710; K01768; K02482; K02480; K07653; K07636; K11527; K07678; K10715; K10681; K07676; K06379; K07709; K07644; K02486; K13761; K11383; K12767; K07769; K04757; K11357; K10125; K07647; K07717; K07675; K02667;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725908.1 1 473 evalue:1.7e-213 qcov:100.00 identity:81.70;
kegg_pathway_id 02020; 04011; 00983; 03090; 00230; 00790; 00240;
kegg_pathway_name Two-component system - General; MAPK signaling pathway - yeast; Drug metabolism - other enzymes; Type II secretion system; Purine metabolism; Folate biosynthesis; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF07728; PF02954; PF00072; PF00158; PF14532;
pfam_desc AAA domain (dynein-related subfamily); Bacterial regulatory protein, Fis family; Response regulator receiver domain; Sigma-54 interaction domain; Sigma-54 interaction domain;
pfam_id AAA_5; HTH_8; Response_reg; Sigma54_activat; Sigma54_activ_2;
pfam_target db:Pfam-A.hmm|PF07728.14 evalue:1.4e-05 score:24.3 best_domain_score:23.4 name:AAA_5; db:Pfam-A.hmm|PF02954.19 evalue:1.4e-16 score:59.2 best_domain_score:59.2 name:HTH_8; db:Pfam-A.hmm|PF00072.24 evalue:5.5e-26 score:90.2 best_domain_score:88.9 name:Response_reg; db:Pfam-A.hmm|PF00158.26 evalue:2.6e-67 score:225.0 best_domain_score:224.4 name:Sigma54_activat; db:Pfam-A.hmm|PF14532.6 evalue:8.5e-25 score:86.7 best_domain_score:85.2 name:Sigma54_activ_2;
sprot_desc Type 4 fimbriae expression regulatory protein PilR;
sprot_id sp|Q00934|PILR_PSEAE;
sprot_target db:uniprot_sprot|sp|Q00934|PILR_PSEAE 1 473 evalue:2.1e-138 qcov:100.00 identity:56.20;
46923 45277 CDS
ID metaerg.pl|08406
allec_ids 2.7.13.3;
allgo_ids GO:0000155; GO:0007165; GO:0016021; GO:0005886; GO:0005524; GO:0060491;
allko_ids K07717; K07675; K10942; K13040; K07647; K11357; K11629; K10125; K04757; K14509; K07769; K11383; K02486; K12767; K07644; K13532; K07709; K10681; K07676; K06379; K07650; K01769; K07678; K10715; K13587; K02030; K11527; K07636; K07653; K07638; K02480; K02482; K08801; K01768; K07656; K07640; K07710; K07716; K07697; K02489; K10916; K08479; K03388; K02668; K02491; K07643; K11231; K08282; K07704; K10909; K07677; K07645; K07708; K11640; K11356; K02484; K07642; K11711; K07698; K07718; K07651; K07648; K07679; K13533; K08884; K07711; K11633; K07768; K11354; K07778; K07652; K07673; K07639; K08475; K07646; K13598; K07641; K07637; K03407; K07777; K07682; K00936; K07649; K07654;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725907.1 1 537 evalue:3.2e-240 qcov:98.00 identity:80.40;
kegg_pathway_id 00230; 05111; 00790; 03090; 04011; 02020;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Folate biosynthesis; Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF02518; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:6.4e-18 score:64.5 best_domain_score:63.7 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.9e-12 score:46.2 best_domain_score:44.9 name:HisKA;
sprot_desc Sensor protein PilS;
sprot_id sp|P33639|PILS_PSEAE;
sprot_target db:uniprot_sprot|sp|P33639|PILS_PSEAE 15 530 evalue:1.1e-74 qcov:94.20 identity:36.40;
tm_num 5;
46923 45277 transmembrane_helix
ID metaerg.pl|08407
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology i45337-45399o45427-45486i45547-45615o45643-45711i45748-45816o;
47153 48319 CDS
ID metaerg.pl|08408
allec_ids 6.2.1.5; 6.2.1.-;
allgo_ids GO:0003824; GO:0005524; GO:0000287; GO:0004775; GO:0006099;
allko_ids K01900; K01648; K01899; K01902; K08692; K14067; K01903;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725906.1 1 387 evalue:3.4e-188 qcov:99.70 identity:88.90;
kegg_pathway_id 00720; 00020; 00630; 00640; 00660;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Citrate cycle (TCA cycle); Glyoxylate and dicarboxylate metabolism; Propanoate metabolism; C5-Branched dibasic acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-6318; P601-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5464; P23-PWY; PWY-5392; PWY-5958; PWY-6432; TCA-GLYOX-BYPASS; PWY-6457; PWY-5690; PWY-6146; P42-PWY; PWY-5913; PWY-5537; PWY-6443; CARNMET-PWY; TCA; PWY-5538;
metacyc_pathway_name L-phenylalanine degradation IV (mammalian, via side chain);; (+)-camphor degradation;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; reductive TCA cycle I;; reductive TCA cycle II;; acridone alkaloid biosynthesis;; curcuminoid biosynthesis;; superpathway of glyoxylate bypass and TCA;; cinnamoyl-CoA biosynthesis;; TCA cycle II (plants and fungi);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; incomplete reductive TCA cycle;; partial TCA cycle (obligate autotrophs);; pyruvate fermentation to acetate V;; benzoate biosynthesis I (CoA-dependent, β-oxidative);; L-carnitine degradation I;; TCA cycle I (prokaryotic);; pyruvate fermentation to acetate VI;;
metacyc_pathway_type PHENYLALANINE-DEG;; Camphor-Degradation;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Reductive-TCA-Cycles;; ALKALOIDS-SYN;; POLYKETIDE-SYN; Super-Pathways;; Super-Pathways; TCA-VARIANTS;; AROMATIC-COMPOUNDS-BIOSYN; CINNAMATE-SYN;; TCA-VARIANTS;; Biosynthesis; Super-Pathways;; Reductive-TCA-Cycles;; TCA-VARIANTS;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Benzoate-Biosynthesis; Super-Pathways;; CARN-DEG;; TCA-VARIANTS;; Pyruvate-Acetate-Fermentation; Super-Pathways;;
pfam_acc PF08442; PF13549; PF00549;
pfam_desc ATP-grasp domain; ATP-grasp domain; CoA-ligase;
pfam_id ATP-grasp_2; ATP-grasp_5; Ligase_CoA;
pfam_target db:Pfam-A.hmm|PF08442.10 evalue:2.8e-77 score:258.1 best_domain_score:257.6 name:ATP-grasp_2; db:Pfam-A.hmm|PF13549.6 evalue:3.3e-20 score:71.7 best_domain_score:70.8 name:ATP-grasp_5; db:Pfam-A.hmm|PF00549.19 evalue:2.3e-24 score:85.2 best_domain_score:84.2 name:Ligase_CoA;
sprot_desc Succinate--CoA ligase [ADP-forming] subunit beta;
sprot_id sp|B0U5F8|SUCC_XYLFM;
sprot_target db:uniprot_sprot|sp|B0U5F8|SUCC_XYLFM 1 387 evalue:1.4e-140 qcov:99.70 identity:66.70;
tigrfam_acc TIGR01016;
tigrfam_desc succinate-CoA ligase, beta subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name sucCoAbeta;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01016 evalue:4.4e-166 score:551.7 best_domain_score:551.6 name:TIGR01016;
48331 49203 CDS
ID metaerg.pl|08409
allec_ids 6.2.1.5; 6.2.1.-;
allgo_ids GO:0048037; GO:0005829; GO:0009361; GO:0004550; GO:0000166; GO:0004775; GO:0009142; GO:0006105; GO:0006104; GO:0006099;
allko_ids K01900; K01899; K08692; K01902; K01903;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725905.1 1 290 evalue:5.6e-151 qcov:100.00 identity:93.40;
kegg_pathway_id 00020; 00630; 00640; 00660; 00720;
kegg_pathway_name Citrate cycle (TCA cycle); Glyoxylate and dicarboxylate metabolism; Propanoate metabolism; C5-Branched dibasic acid metabolism; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-5958; PWY-5392; GLYCOLYSIS-TCA-GLYOX-BYPASS; P23-PWY; PWY-5464; P601-PWY; PWY-6318; CARNMET-PWY; TCA; PWY-5538; P42-PWY; PWY-6443; PWY-5913; PWY-5537; PWY-5690; PWY-6457; PWY-6146; PWY-6432; TCA-GLYOX-BYPASS;
metacyc_pathway_name acridone alkaloid biosynthesis;; reductive TCA cycle II;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; reductive TCA cycle I;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; (+)-camphor degradation;; L-phenylalanine degradation IV (mammalian, via side chain);; L-carnitine degradation I;; TCA cycle I (prokaryotic);; pyruvate fermentation to acetate VI;; incomplete reductive TCA cycle;; benzoate biosynthesis I (CoA-dependent, β-oxidative);; partial TCA cycle (obligate autotrophs);; pyruvate fermentation to acetate V;; TCA cycle II (plants and fungi);; cinnamoyl-CoA biosynthesis;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; curcuminoid biosynthesis;; superpathway of glyoxylate bypass and TCA;;
metacyc_pathway_type ALKALOIDS-SYN;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Camphor-Degradation;; PHENYLALANINE-DEG;; CARN-DEG;; TCA-VARIANTS;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Reductive-TCA-Cycles;; Benzoate-Biosynthesis; Super-Pathways;; TCA-VARIANTS;; Pyruvate-Acetate-Fermentation; Super-Pathways;; TCA-VARIANTS;; AROMATIC-COMPOUNDS-BIOSYN; CINNAMATE-SYN;; Biosynthesis; Super-Pathways;; POLYKETIDE-SYN; Super-Pathways;; Super-Pathways; TCA-VARIANTS;;
pfam_acc PF02629; PF13380; PF00549; PF13607;
pfam_desc CoA binding domain; CoA binding domain; CoA-ligase; Succinyl-CoA ligase like flavodoxin domain;
pfam_id CoA_binding; CoA_binding_2; Ligase_CoA; Succ_CoA_lig;
pfam_target db:Pfam-A.hmm|PF02629.19 evalue:5.7e-32 score:109.5 best_domain_score:108.8 name:CoA_binding; db:Pfam-A.hmm|PF13380.6 evalue:3.6e-05 score:23.5 best_domain_score:21.9 name:CoA_binding_2; db:Pfam-A.hmm|PF00549.19 evalue:2.2e-20 score:72.3 best_domain_score:71.6 name:Ligase_CoA; db:Pfam-A.hmm|PF13607.6 evalue:4.4e-10 score:38.7 best_domain_score:36.3 name:Succ_CoA_lig;
sprot_desc Succinate--CoA ligase [ADP-forming] subunit alpha;
sprot_id sp|P53591|SUCD_COXBU;
sprot_target db:uniprot_sprot|sp|P53591|SUCD_COXBU 1 286 evalue:1.0e-119 qcov:98.60 identity:71.30;
tigrfam_acc TIGR01019;
tigrfam_desc succinate-CoA ligase, alpha subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name sucCoAalpha;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01019 evalue:2.2e-141 score:469.4 best_domain_score:469.2 name:TIGR01019;
49279 49608 CDS
ID metaerg.pl|08410
genomedb_OC d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Palsa-1315;s__Palsa-1315 sp002869895;
genomedb_acc GCA_002869895.1;
genomedb_target db:genomedb|GCA_002869895.1|PLY22189.1 1 103 evalue:2.3e-25 qcov:94.50 identity:54.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF05635;
pfam_desc 23S rRNA-intervening sequence protein;
pfam_id 23S_rRNA_IVP;
pfam_target db:Pfam-A.hmm|PF05635.11 evalue:1.1e-32 score:111.7 best_domain_score:111.6 name:23S_rRNA_IVP;
tigrfam_acc TIGR02436;
tigrfam_desc four helix bundle protein;
tigrfam_name TIGR02436;
tigrfam_target db:TIGRFAMs.hmm|TIGR02436 evalue:1e-32 score:111.7 best_domain_score:111.6 name:TIGR02436;
49652 51304 CDS
ID metaerg.pl|08411
allec_ids 6.3.5.1; 6.3.1.5;
allgo_ids GO:0006807; GO:0005524; GO:0016810; GO:0003952; GO:0008795; GO:0009435;
allko_ids K03820; K01950;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725904.1 7 545 evalue:8.1e-268 qcov:98.00 identity:83.00;
kegg_pathway_id 00251; 00760;
kegg_pathway_name Glutamate metabolism; Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-5381; PYRIDNUCSYN-PWY; PWY-3502; NADSYN-PWY; PWY0-781; PWY-5653;
metacyc_pathway_name pyridine nucleotide cycling (plants);; NAD de novo biosynthesis I (from aspartate);; superpathway of NAD biosynthesis in eukaryotes;; NAD de novo biosynthesis II (from tryptophan);; aspartate superpathway;; NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde;;
metacyc_pathway_type NAD-Metabolism;; NAD-SYN;; NAD-SYN; Super-Pathways;; NAD-SYN; Super-Pathways;; Super-Pathways;; NAD-SYN;;
pfam_acc PF00795; PF02540;
pfam_desc Carbon-nitrogen hydrolase; NAD synthase;
pfam_id CN_hydrolase; NAD_synthase;
pfam_target db:Pfam-A.hmm|PF00795.22 evalue:3.1e-29 score:101.3 best_domain_score:100.8 name:CN_hydrolase; db:Pfam-A.hmm|PF02540.17 evalue:6.1e-73 score:244.1 best_domain_score:243.7 name:NAD_synthase;
sprot_desc Glutamine-dependent NAD(+) synthetase;
sprot_id sp|Q9PC24|NADE_XYLFA;
sprot_target db:uniprot_sprot|sp|Q9PC24|NADE_XYLFA 7 541 evalue:2.7e-145 qcov:97.30 identity:49.60;
tigrfam_acc TIGR00552;
tigrfam_desc NAD+ synthetase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name nadE;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00552 evalue:4.6e-60 score:202.1 best_domain_score:201.7 name:TIGR00552;
53713 51389 CDS
ID metaerg.pl|08412
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Henriciella;s__Henriciella sp001854405;
genomedb_acc GCF_001854405.1;
genomedb_target db:genomedb|GCF_001854405.1|WP_083332645.1 6 763 evalue:1.9e-49 qcov:97.90 identity:27.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF00515; PF13374; PF13424; PF14559; PF17874; PF00486;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; MalT-like TPR region; Transcriptional regulatory protein, C terminal;
pfam_id TPR_1; TPR_10; TPR_12; TPR_19; TPR_MalT; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:4.4e-08 score:31.9 best_domain_score:13.4 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:6.2e-09 score:34.7 best_domain_score:19.4 name:TPR_10; db:Pfam-A.hmm|PF13424.6 evalue:9.8e-21 score:73.1 best_domain_score:40.4 name:TPR_12; db:Pfam-A.hmm|PF14559.6 evalue:1.3e-08 score:34.4 best_domain_score:28.5 name:TPR_19; db:Pfam-A.hmm|PF17874.1 evalue:3.4e-10 score:39.1 best_domain_score:31.0 name:TPR_MalT; db:Pfam-A.hmm|PF00486.28 evalue:4.8e-18 score:64.3 best_domain_score:58.3 name:Trans_reg_C;
55356 53764 CDS
ID metaerg.pl|08413
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__UBA1429;f__UBA1429;g__UBA1429;s__UBA1429 sp002329325;
genomedb_acc GCA_002329325.1;
genomedb_target db:genomedb|GCA_002329325.1|DCTX01000055.1_14 7 516 evalue:9.9e-37 qcov:96.20 identity:31.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF13229;
pfam_desc Right handed beta helix region;
pfam_id Beta_helix;
pfam_target db:Pfam-A.hmm|PF13229.6 evalue:1.5e-14 score:53.4 best_domain_score:30.3 name:Beta_helix;
sp YES;
53764 53835 signal_peptide
ID metaerg.pl|08414
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
55677 58916 CDS
ID metaerg.pl|08415
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__RBG-16-64-32;g__RBG-16-64-32;s__RBG-16-64-32 sp001795235;
genomedb_acc GCA_001795235.1;
genomedb_target db:genomedb|GCA_001795235.1|OGO47527.1 58 997 evalue:5.7e-31 qcov:87.10 identity:26.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF13229;
pfam_desc Right handed beta helix region;
pfam_id Beta_helix;
pfam_target db:Pfam-A.hmm|PF13229.6 evalue:1.5e-12 score:46.9 best_domain_score:29.5 name:Beta_helix;
sp YES;
55677 55739 signal_peptide
ID metaerg.pl|08416
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
59118 60584 CDS
ID metaerg.pl|08417
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Anderseniellaceae;g__PALSA-927;s__PALSA-927 sp003151375;
genomedb_acc GCA_003151375.1;
genomedb_target db:genomedb|GCA_003151375.1|PLXI01000010.1_8 9 477 evalue:2.0e-36 qcov:96.10 identity:30.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
sp YES;
tigrfam_acc TIGR04393;
tigrfam_desc T5SS/PEP-CTERM-associated repeat;
tigrfam_name rpt_T5SS_PEPC;
tigrfam_target db:TIGRFAMs.hmm|TIGR04393 evalue:2.3e-28 score:97.1 best_domain_score:49.0 name:TIGR04393;
59118 59180 signal_peptide
ID metaerg.pl|08418
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
60676 61029 CDS
ID metaerg.pl|08419
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
sp YES;
60676 60747 signal_peptide
ID metaerg.pl|08420
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
61141 61842 CDS
ID metaerg.pl|08421
allko_ids K01096; K12978; K06153;
genomedb_OC d__Bacteria;p__Planctomycetota;c__Planctomycetes;o__Pirellulales;f__Pirellulaceae;g__Rhodopirellula;s__Rhodopirellula sp000346425;
genomedb_acc GCF_000346425.1;
genomedb_target db:genomedb|GCF_000346425.1|WP_009093735.1 15 215 evalue:1.2e-39 qcov:86.30 identity:46.20;
kegg_pathway_id 00550; 00564;
kegg_pathway_name Peptidoglycan biosynthesis; Glycerophospholipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF01569;
pfam_desc PAP2 superfamily;
pfam_id PAP2;
pfam_target db:Pfam-A.hmm|PF01569.21 evalue:4.5e-22 score:77.5 best_domain_score:77.5 name:PAP2;
tm_num 6;
61141 61842 transmembrane_helix
ID metaerg.pl|08422
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology i61165-61224o61339-61407i61426-61494o61537-61605i61639-61707o61720-61788i;
61839 62648 CDS
ID metaerg.pl|08423
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Xenococcaceae;g__Myxosarcina;s__Myxosarcina sp000756305;
genomedb_acc GCF_000756305.1;
genomedb_target db:genomedb|GCF_000756305.1|WP_052055630.1 12 267 evalue:1.5e-33 qcov:95.20 identity:32.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF06724;
pfam_desc Domain of Unknown Function (DUF1206);
pfam_id DUF1206;
pfam_target db:Pfam-A.hmm|PF06724.11 evalue:2.9e-35 score:119.4 best_domain_score:48.8 name:DUF1206;
tm_num 6;
61839 62648 transmembrane_helix
ID metaerg.pl|08424
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology i61896-61964o62022-62090i62148-62216o62274-62342i62403-62471o62562-62630i;
62668 63561 CDS
ID metaerg.pl|08425
allec_ids 2.7.1.-;
allgo_ids GO:0016301; GO:0005737; GO:0005524; GO:0001727; GO:0000287; GO:0003951; GO:0008654;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725919.1 1 287 evalue:5.4e-101 qcov:96.60 identity:63.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id LIPA-CORESYN-PWY; PWY-6577; PWY0-1261; PWY-5107; PLPSAL-PWY; PWY0-845; LPSSYN-PWY; PWY0-163; P1-PWY; PWY-5381;
metacyc_pathway_name lipid A-core biosynthesis (E. coli K-12);; farnesylcysteine salvage pathway;; anhydromuropeptides recycling I;; phytol salvage pathway;; pyridoxal 5'-phosphate salvage I;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;; superpathway of lipopolysaccharide biosynthesis;; ; ; pyridine nucleotide cycling (plants);;
metacyc_pathway_type Glycan-Biosynthesis; Lipid-Biosynthesis;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Anhydromuropeptides-Recycling;; DITERPENOID-SYN;; Vitamin-B6-Biosynthesis;; Super-Pathways; Vitamin-B6-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;; ; ; NAD-Metabolism;;
pfam_acc PF00781;
pfam_desc Diacylglycerol kinase catalytic domain;
pfam_id DAGK_cat;
pfam_target db:Pfam-A.hmm|PF00781.24 evalue:1.1e-25 score:88.9 best_domain_score:88.3 name:DAGK_cat;
sprot_desc Probable lipid kinase YegS-like;
sprot_id sp|Q1QUK4|YEGS_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QUK4|YEGS_CHRSD 55 289 evalue:1.5e-25 qcov:79.10 identity:32.10;
tigrfam_acc TIGR00147;
tigrfam_desc lipid kinase, YegS/Rv2252/BmrU family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00147;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00147 evalue:6.8e-51 score:172.1 best_domain_score:172.0 name:TIGR00147;
63566 63994 CDS
ID metaerg.pl|08426
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
65274 64096 CDS
ID metaerg.pl|08427
allec_ids 2.6.1.1;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0004069;
allko_ids K14264; K00837; K14287; K00841; K00812; K00825; K14155; K01760; K14267; K10907; K00816; K00818; K00842;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725902.1 1 392 evalue:1.7e-190 qcov:100.00 identity:84.70;
kegg_pathway_id 00400; 00401; 00380; 00271; 00350; 00300; 00450; 00330; 00220; 00272; 00310; 00710; 00920; 00360; 00910; 00252; 00251;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Novobiocin biosynthesis; Tryptophan metabolism; Methionine metabolism; Tyrosine metabolism; Lysine biosynthesis; Selenoamino acid metabolism; Arginine and proline metabolism; Urea cycle and metabolism of amino groups; Cysteine metabolism; Lysine degradation; Carbon fixation in photosynthetic organisms; Sulfur metabolism; Phenylalanine metabolism; Nitrogen metabolism; Alanine and aspartate metabolism; Glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id MALATE-ASPARTATE-SHUTTLE-PWY; THRESYN-PWY; PWY0-781; ASPARTATESYN-PWY; PWY-6318; ASPARTATE-DEG1-PWY; GLUTDEG-PWY; PWY-5328; PWY-5913; PWY-5347; PWY-5345; P4-PWY; PWY-3001; CYSTEINE-DEG-PWY; PWY-6146; ASPASN-PWY;
metacyc_pathway_name L-aspartate degradation II;; superpathway of L-threonine biosynthesis;; aspartate superpathway;; L-aspartate biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; L-aspartate degradation I;; L-glutamate degradation II;; superpathway of L-methionine salvage and degradation;; partial TCA cycle (obligate autotrophs);; superpathway of L-methionine biosynthesis (transsulfuration);; superpathway of L-methionine biosynthesis (by sulfhydrylation);; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-isoleucine biosynthesis I;; L-cysteine degradation I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of L-aspartate and L-asparagine biosynthesis;;
metacyc_pathway_type ASPARTATE-DEG;; Super-Pathways; THREONINE-BIOSYNTHESIS;; Super-Pathways;; ASPARTATE-SYN;; PHENYLALANINE-DEG;; ASPARTATE-DEG;; ASPARTATE-SYN; GLUTAMATE-DEG;; METHIONINE-DEG; Super-Pathways;; TCA-VARIANTS;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; CYSTEINE-DEG;; Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Metabolic-Clusters; Super-Pathways;;
pfam_acc PF00155; PF01041;
pfam_desc Aminotransferase class I and II; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:3.2e-74 score:249.5 best_domain_score:249.3 name:Aminotran_1_2; db:Pfam-A.hmm|PF01041.17 evalue:7.2e-06 score:24.8 best_domain_score:24.2 name:DegT_DnrJ_EryC1;
sprot_desc Aspartate aminotransferase;
sprot_id sp|Q59228|AAT_GEOSE;
sprot_target db:uniprot_sprot|sp|Q59228|AAT_GEOSE 3 388 evalue:3.3e-105 qcov:98.50 identity:51.00;
65365 67359 CDS
ID metaerg.pl|08428
allec_ids 3.1.25.-;
allgo_ids GO:0003677; GO:0005524; GO:0016787; GO:0005737; GO:0009380; GO:0016887; GO:0009381; GO:0006289; GO:0009432;
allko_ids K05591; K10896; K03702;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725901.1 1 660 evalue:0.0e+00 qcov:99.40 identity:87.90;
kegg_pathway_id 03420;
kegg_pathway_name Nucleotide excision repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF00271; PF04851; PF02151; PF12344; PF17757;
pfam_desc Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; UvrB/uvrC motif; Ultra-violet resistance protein B; UvrB interaction domain;
pfam_id Helicase_C; ResIII; UVR; UvrB; UvrB_inter;
pfam_target db:Pfam-A.hmm|PF00271.31 evalue:4.3e-17 score:61.7 best_domain_score:60.4 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:6.1e-12 score:45.1 best_domain_score:43.3 name:ResIII; db:Pfam-A.hmm|PF02151.19 evalue:9.7e-10 score:37.1 best_domain_score:35.5 name:UVR; db:Pfam-A.hmm|PF12344.8 evalue:1.5e-22 score:78.4 best_domain_score:77.1 name:UvrB; db:Pfam-A.hmm|PF17757.1 evalue:1.9e-33 score:113.7 best_domain_score:112.3 name:UvrB_inter;
sprot_desc UvrABC system protein B;
sprot_id sp|P72174|UVRB_PSEAE;
sprot_target db:uniprot_sprot|sp|P72174|UVRB_PSEAE 3 657 evalue:9.9e-267 qcov:98.60 identity:69.80;
tigrfam_acc TIGR00631;
tigrfam_desc excinuclease ABC subunit B;
tigrfam_mainrole DNA metabolism;
tigrfam_name uvrb;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00631 evalue:0 score:1055.6 best_domain_score:1055.4 name:TIGR00631;
68453 67602 CDS
ID metaerg.pl|08429
allec_ids 3.1.2.12;
allgo_ids GO:0005576; GO:0016787; GO:0031410; GO:0005829; GO:0052689; GO:0016788; GO:0042802; GO:0018738; GO:0046294;
allko_ids K01070;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Nitrococcaceae;g__Spiribacter;s__Spiribacter salinus;
genomedb_acc GCF_000319575.2;
genomedb_target db:genomedb|GCF_000319575.2|WP_016353434.1 3 281 evalue:5.1e-125 qcov:98.60 identity:74.20;
kegg_pathway_id 00680;
kegg_pathway_name Methane metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metabolic_acc TIGR02821;
metabolic_process compound:C1 compounds;process:Formaldehyde oxidation;gene:S-formylglutathione hydrolase;;
metabolic_target db:metabolic.hmm|TIGR02821 evalue:9.9e-131 score:434.4 best_domain_score:434.3 name:TIGR02821;
metacyc_pathway_id PWY-1882; PWY-1801;
metacyc_pathway_name superpathway of C1 compounds oxidation to CO2;; formaldehyde oxidation II (glutathione-dependent);;
metacyc_pathway_type C1-COMPOUNDS; Super-Pathways;; Formaldehyde-Oxidation;;
pfam_acc PF00756; PF10503; PF00326;
pfam_desc Putative esterase; Esterase PHB depolymerase; Prolyl oligopeptidase family;
pfam_id Esterase; Esterase_phd; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00756.20 evalue:1.1e-58 score:198.0 best_domain_score:197.8 name:Esterase; db:Pfam-A.hmm|PF10503.9 evalue:6.4e-07 score:28.3 best_domain_score:17.8 name:Esterase_phd; db:Pfam-A.hmm|PF00326.21 evalue:9.5e-07 score:27.7 best_domain_score:27.2 name:Peptidase_S9;
sprot_desc S-formylglutathione hydrolase;
sprot_id sp|Q9R0P3|ESTD_MOUSE;
sprot_target db:uniprot_sprot|sp|Q9R0P3|ESTD_MOUSE 5 282 evalue:1.4e-97 qcov:98.20 identity:57.70;
tigrfam_acc TIGR02821;
tigrfam_desc S-formylglutathione hydrolase;
tigrfam_mainrole Cellular processes;
tigrfam_name fghA_ester_D;
tigrfam_sub1role Detoxification;
tigrfam_target db:TIGRFAMs.hmm|TIGR02821 evalue:9.9e-131 score:434.4 best_domain_score:434.3 name:TIGR02821;
69723 68596 CDS
ID metaerg.pl|08430
allec_ids 1.1.1.284; 1.1.1.284 1.1.1.1;
allgo_ids GO:0055114; GO:0005829; GO:0004024; GO:0051903; GO:0008270; GO:0006069; GO:0046294;
allko_ids K00121; K13951; K00055; K00001; K13953; K13952; K07538; K13980;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725900.1 1 369 evalue:2.5e-191 qcov:98.40 identity:88.60;
kegg_pathway_id 00621; 00680; 00350; 00071; 00360; 00624; 00010; 00622; 00641; 00930; 00632; 00120;
kegg_pathway_name Biphenyl degradation; Methane metabolism; Tyrosine metabolism; Fatty acid metabolism; Phenylalanine metabolism; 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis; Toluene and xylene degradation; 3-Chloroacrylic acid degradation; Caprolactam degradation; Benzoate degradation via CoA ligation; Bile acid biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metabolic_acc TIGR02818;
metabolic_process compound:C1 compounds;process:Formaldehyde oxidation;gene:S-(hydroxymethyl)glutathione dehydrogenase;;
metacyc_pathway_id PWY-1882; PWY-1801;
metacyc_pathway_name superpathway of C1 compounds oxidation to CO2;; formaldehyde oxidation II (glutathione-dependent);;
metacyc_pathway_type C1-COMPOUNDS; Super-Pathways;; Formaldehyde-Oxidation;;
pfam_acc PF08240; PF00107;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:1.4e-24 score:85.3 best_domain_score:84.4 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:5.1e-25 score:87.2 best_domain_score:86.5 name:ADH_zinc_N;
sprot_desc S-(hydroxymethyl)glutathione dehydrogenase;
sprot_id sp|P73138|FRMA_SYNY3;
sprot_target db:uniprot_sprot|sp|P73138|FRMA_SYNY3 1 369 evalue:1.2e-155 qcov:98.40 identity:72.90;
tigrfam_acc TIGR02818;
tigrfam_desc S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name adh_III_F_hyde;
tigrfam_sub1role Fermentation;
tigrfam_target db:TIGRFAMs.hmm|TIGR02818 evalue:3.3e-214 score:710.0 best_domain_score:709.8 name:TIGR02818;
70049 70804 CDS
ID metaerg.pl|08431
allgo_ids GO:0005216; GO:0006811; GO:0016020; GO:0016021; GO:0005886; GO:0010461; GO:0009881; GO:0007602; GO:0018298;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SCGC-AAA027-K21;s__SCGC-AAA027-K21 sp002292845;
genomedb_acc GCA_002292845.1;
genomedb_target db:genomedb|GCA_002292845.1|DBBZ01000297.1_21 4 249 evalue:1.7e-103 qcov:98.00 identity:78.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF01036;
pfam_desc Bacteriorhodopsin-like protein;
pfam_id Bac_rhodopsin;
pfam_target db:Pfam-A.hmm|PF01036.18 evalue:9.8e-27 score:93.2 best_domain_score:92.9 name:Bac_rhodopsin;
sprot_desc Green-light absorbing proteorhodopsin;
sprot_id sp|Q9F7P4|PRRG_PRB01;
sprot_target db:uniprot_sprot|sp|Q9F7P4|PRRG_PRB01 13 248 evalue:3.3e-21 qcov:94.00 identity:32.40;
tm_num 7;
70049 70804 transmembrane_helix
ID metaerg.pl|08432
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology o70091-70150i70169-70237o70316-70369i70403-70462o70490-70558i70595-70663o70706-70774i;
70830 71759 CDS
ID metaerg.pl|08433
allgo_ids GO:0008299;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas sp003241895;
genomedb_acc GCA_003241895.1;
genomedb_target db:genomedb|GCA_003241895.1|PZO09321.1 31 298 evalue:2.3e-54 qcov:86.70 identity:48.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:4.8e-34 score:116.8 best_domain_score:116.4 name:polyprenyl_synt;
71756 73273 CDS
ID metaerg.pl|08434
allec_ids 1.3.99.31; 1.14.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0005886; GO:0071949; GO:0016627; GO:0016120; GO:0016117;
allko_ids K03388;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas sp003241895;
genomedb_acc GCA_003241895.1;
genomedb_target db:genomedb|GCA_003241895.1|PZO09320.1 1 492 evalue:1.2e-220 qcov:97.40 identity:74.40;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-5175; PWY-5987; PWY-5366; PWY-5397; 4TOLCARBDEG-PWY; PWY-6475; CAROTENOID-PWY; TOLSULFDEG-PWY; PWY-5288; PWY-5942; PWY-5947; PWY-5367; PWY-5362; PWY-6287; PWY-762; PWY-5944; PWY-782;
metacyc_pathway_name lactucaxanthin biosynthesis;; sorgoleone biosynthesis;; palmitoleate biosynthesis II (plants and bacteria);; crocetin biosynthesis;; 4-toluenecarboxylate degradation;; trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria);; superpathway of carotenoid biosynthesis in plants;; 4-toluenesulfonate degradation I;; astaxanthin biosynthesis (bacteria, fungi, algae);; trans-lycopene biosynthesis I;; lutein biosynthesis;; petroselinate biosynthesis;; sapienate biosynthesis;; neurosporene biosynthesis;; phospholipid desaturation;; zeaxanthin biosynthesis;; glycolipid desaturation;;
metacyc_pathway_type C40-Carotenoids-Biosynthesis;; QUINONE-SYN;; Palmitoleate-Biosynthesis;; APOCAROTENOID-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;; Lycopene-Biosynthesis;; C40-Carotenoids-Biosynthesis; Super-Pathways;; 4-Toluenesulfonate-Degradation;; C40-Carotenoids-Biosynthesis;; Lycopene-Biosynthesis; Super-Pathways;; C40-Carotenoids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Phospholipid-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Glycolipids-Biosynthesis;;
pfam_acc PF01593; PF01266; PF00890; PF12831; PF01134; PF03486; PF13450; PF00070; PF07992;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; DAO; FAD_binding_2; FAD_oxidored; GIDA; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:8.2e-24 score:83.9 best_domain_score:82.5 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:5.4e-07 score:28.7 best_domain_score:24.0 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.1e-07 score:30.5 best_domain_score:27.3 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:1e-07 score:30.9 best_domain_score:30.9 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:1.7e-05 score:23.3 best_domain_score:20.3 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:2.7e-08 score:32.2 best_domain_score:21.7 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:4.9e-14 score:51.6 best_domain_score:49.4 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:1.9e-06 score:27.6 best_domain_score:18.9 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.1e-09 score:37.2 best_domain_score:27.3 name:Pyr_redox_2;
sprot_desc Phytoene desaturase (lycopene-forming);
sprot_id sp|P21685|CRTI_PANAN;
sprot_target db:uniprot_sprot|sp|P21685|CRTI_PANAN 1 486 evalue:7.6e-126 qcov:96.20 identity:47.40;
tigrfam_acc TIGR02734;
tigrfam_desc phytoene desaturase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name crtI_fam;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02734 evalue:2.6e-171 score:569.9 best_domain_score:569.6 name:TIGR02734;
73270 74253 CDS
ID metaerg.pl|08435
allec_ids 2.5.1.-;
allgo_ids GO:0004310; GO:0016767; GO:0046872; GO:0051996; GO:0016117; GO:0006696;
allko_ids K02291;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas sp003241895;
genomedb_acc GCA_003241895.1;
genomedb_target db:genomedb|GCA_003241895.1|PZO09319.1 14 301 evalue:4.2e-62 qcov:88.10 identity:47.90;
kegg_pathway_id 00906;
kegg_pathway_name Carotenoid biosynthesis - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PWY-5140; PWY-5701; PWY-6404; PWY-5806; PWY-5135; PWY-5863; PWY-5816; PWY-5898; PWY-2681; PWY-5068; PWY-5845; PWY-5862; PWY-5896; PWY-5897; PWY-5808; PWY-5132; PWY-6263; PWY-6262; PWY-724; PWY-5861; POLYISOPRENSYN-PWY; PWY-5783; PWY-5805; PWY-6383; PWY-5893; PWY-5027; PWY-5864; PWY-5133; PWY-6129; PWY-5817; PWY-6403; PWY-5899; PWY-4502; PWY-5064; PWY-5838; PWY-6520; PWY-5134;
metacyc_pathway_name cannabinoid biosynthesis;; shikonin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; xanthohumol biosynthesis;; superpathway of phylloquinol biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of menaquinol-12 biosynthesis;; trans-zeatin biosynthesis;; chlorophyll cycle;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-11 biosynthesis;; hyperforin and adhyperforin biosynthesis;; lupulone and humulone biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; demethylmenaquinol-8 biosynthesis II;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; polyisoprenoid biosynthesis (E. coli);; octaprenyl diphosphate biosynthesis;; nonaprenyl diphosphate biosynthesis I;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; tridecaprenyl diphosphate biosynthesis;; phylloquinol biosynthesis;; superpathway of plastoquinol biosynthesis;; colupulone and cohumulone biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;; superpathway of menaquinol-13 biosynthesis;; wighteone and luteone biosynthesis;; chlorophyll a biosynthesis II;; superpathway of menaquinol-8 biosynthesis I;; nonaprenyl diphosphate biosynthesis II;; superpathway of bitter acids biosynthesis;;
metacyc_pathway_type TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; PRENYLFLAVONOID-SYN;; Phylloquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; CYTOKININ-BIOSYNTHESIS;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Lipid-Biosynthesis;; Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;;
pfam_acc PF00494;
pfam_desc Squalene/phytoene synthase;
pfam_id SQS_PSY;
pfam_target db:Pfam-A.hmm|PF00494.19 evalue:2.7e-53 score:180.4 best_domain_score:180.0 name:SQS_PSY;
sprot_desc Phytoene synthase;
sprot_id sp|P17056|CRTB_RHOCB;
sprot_target db:uniprot_sprot|sp|P17056|CRTB_RHOCB 13 282 evalue:9.2e-32 qcov:82.60 identity:34.50;
74223 75395 CDS
ID metaerg.pl|08436
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Cryobacterium;s__Cryobacterium roopkundense;
genomedb_acc GCF_000764165.1;
genomedb_target db:genomedb|GCF_000764165.1|WP_035838513.1 8 381 evalue:9.4e-77 qcov:95.90 identity:43.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF05834;
pfam_desc Lycopene cyclase protein;
pfam_id Lycopene_cycl;
pfam_target db:Pfam-A.hmm|PF05834.12 evalue:2.3e-58 score:197.3 best_domain_score:197.1 name:Lycopene_cycl;
75414 76301 CDS
ID metaerg.pl|08437
allec_ids 1.13.11.63; 1.14.99.36;
allgo_ids GO:0016702; GO:0055114; GO:0005887; GO:0010436; GO:0005506; GO:0016121; GO:0042574;
allko_ids K21817;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiomicrospirales;f__Thiomicrospiraceae;g__Thiomicrospira;s__Thiomicrospira cyclica;
genomedb_acc GCF_000214825.1;
genomedb_target db:genomedb|GCF_000214825.1|WP_013836037.1 7 284 evalue:1.6e-41 qcov:94.20 identity:42.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF15461;
pfam_desc Beta-carotene 15,15'-dioxygenase;
pfam_id BCD;
pfam_target db:Pfam-A.hmm|PF15461.6 evalue:1.7e-46 score:158.1 best_domain_score:158.1 name:BCD;
sprot_desc Beta-carotene 15,15'-dioxygenase;
sprot_id sp|Q4PNI0|BLH_UNCMB;
sprot_target db:uniprot_sprot|sp|Q4PNI0|BLH_UNCMB 40 282 evalue:1.4e-10 qcov:82.40 identity:29.60;
tigrfam_acc TIGR03753;
tigrfam_desc beta-carotene 15,15'-monooxygenase, Brp/Blh family;
tigrfam_name blh_monoox;
tigrfam_target db:TIGRFAMs.hmm|TIGR03753 evalue:3.9e-53 score:179.9 best_domain_score:179.9 name:TIGR03753;
tm_num 8;
75414 76301 transmembrane_helix
ID metaerg.pl|08438
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology i75438-75506o75516-75584i75621-75716o75759-75827i75864-75932o75975-76043i76104-76172o76200-76268i;
76520 76311 CDS
ID metaerg.pl|08439
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF14373;
pfam_desc Superinfection immunity protein;
pfam_id Imm_superinfect;
pfam_target db:Pfam-A.hmm|PF14373.6 evalue:8.9e-08 score:31.2 best_domain_score:30.5 name:Imm_superinfect;
tm_num 2;
76520 76311 transmembrane_helix
ID metaerg.pl|08440
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology i76329-76391o76419-76487i;
76559 77842 CDS
ID metaerg.pl|08441
allec_ids 2.7.8.-;
allgo_ids GO:0003824; GO:0016021; GO:0005886; GO:0008808; GO:0032049;
allko_ids K06131;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725899.1 47 423 evalue:5.0e-124 qcov:88.30 identity:60.20;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
metacyc_pathway_id PHOSLIPSYN-PWY; TEICHOICACID-PWY; PWY-5668; PWY4FS-4; PHOSLIPSYN2-PWY; PWY-6385;
metacyc_pathway_name superpathway of phospholipid biosynthesis I (bacteria);; poly(glycerol phosphate) wall teichoic acid biosynthesis;; cardiolipin biosynthesis I;; phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; peptidoglycan biosynthesis III (mycobacteria);;
metacyc_pathway_type Phospholipid-Biosynthesis; Super-Pathways;; Teichoic-Acids-Biosynthesis;; Cardiolipin-Biosynthesis;; PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00614; PF13091;
pfam_desc Phospholipase D Active site motif; PLD-like domain;
pfam_id PLDc; PLDc_2;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:2e-06 score:27.0 best_domain_score:15.6 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:3.6e-38 score:129.7 best_domain_score:76.2 name:PLDc_2;
sprot_desc Cardiolipin synthase;
sprot_id sp|C5D794|CLS_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D794|CLS_GEOSW 54 416 evalue:1.4e-35 qcov:85.00 identity:31.60;
79048 77849 CDS
ID metaerg.pl|08442
allko_ids K01999;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Idiomarina;s__Idiomarina sp000218785;
genomedb_acc GCF_000218785.1;
genomedb_target db:genomedb|GCF_000218785.1|WP_007420426.1 2 391 evalue:1.1e-125 qcov:97.70 identity:58.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF01094; PF13433; PF13458;
pfam_desc Receptor family ligand binding region; Periplasmic binding protein domain; Periplasmic binding protein;
pfam_id ANF_receptor; Peripla_BP_5; Peripla_BP_6;
pfam_target db:Pfam-A.hmm|PF01094.28 evalue:5.2e-15 score:54.6 best_domain_score:54.4 name:ANF_receptor; db:Pfam-A.hmm|PF13433.6 evalue:8.6e-20 score:70.2 best_domain_score:69.6 name:Peripla_BP_5; db:Pfam-A.hmm|PF13458.6 evalue:5.6e-61 score:206.3 best_domain_score:206.0 name:Peripla_BP_6;
sp YES;
77849 77905 lipoprotein_signal_peptide
ID metaerg.pl|08443
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
80003 79080 CDS
ID metaerg.pl|08444
allec_ids 1.1.1.79;
allgo_ids GO:0051287; GO:0055114; GO:0005737; GO:0005886; GO:0030267; GO:0016618;
allko_ids K00058; K12972;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725898.1 1 307 evalue:5.4e-96 qcov:100.00 identity:57.00;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF02826;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain;
pfam_id 2-Hacid_dh_C;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:2e-42 score:143.8 best_domain_score:143.4 name:2-Hacid_dh_C;
sprot_desc Glyoxylate/hydroxypyruvate reductase A;
sprot_id sp|A8GD46|GHRA_SERP5;
sprot_target db:uniprot_sprot|sp|A8GD46|GHRA_SERP5 24 307 evalue:2.6e-52 qcov:92.50 identity:42.20;
81310 80018 CDS
ID metaerg.pl|08445
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725897.1 5 430 evalue:5.9e-157 qcov:99.10 identity:67.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF01979;
pfam_desc Amidohydrolase family;
pfam_id Amidohydro_1;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:1.5e-09 score:36.9 best_domain_score:35.7 name:Amidohydro_1;
sp YES;
80018 80104 signal_peptide
ID metaerg.pl|08446
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
82766 81279 CDS
ID metaerg.pl|08447
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725896.1 1 495 evalue:1.8e-210 qcov:100.00 identity:73.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:6.3e-14 score:51.3 best_domain_score:40.1 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:1.2e-16 score:60.5 best_domain_score:46.0 name:Amidohydro_3;
sp YES;
81279 81338 signal_peptide
ID metaerg.pl|08448
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
84376 82766 CDS
ID metaerg.pl|08449
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725895.1 18 533 evalue:1.9e-197 qcov:96.30 identity:67.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:5.2e-09 score:35.1 best_domain_score:33.9 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:8.9e-12 score:44.4 best_domain_score:39.9 name:Amidohydro_3;
sp YES;
82766 82819 signal_peptide
ID metaerg.pl|08450
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
84609 86528 CDS
ID metaerg.pl|08451
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Ahniellaceae;g__UDEA-SF1;s__UDEA-SF1 sp002995625;
genomedb_acc GCA_002995625.1;
genomedb_target db:genomedb|GCA_002995625.1|PVBP01000113.1_2 62 624 evalue:2.6e-15 qcov:88.10 identity:26.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
sp YES;
tigrfam_acc TIGR01376;
tigrfam_desc chlamydial polymorphic outer membrane protein repeat;
tigrfam_name POMP_repeat;
tigrfam_target db:TIGRFAMs.hmm|TIGR01376 evalue:0.00018 score:20.3 best_domain_score:14.2 name:TIGR01376;
84609 84671 signal_peptide
ID metaerg.pl|08452
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
86971 86600 CDS
ID metaerg.pl|08453
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169677.1 17 121 evalue:2.3e-21 qcov:85.40 identity:55.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF13698;
pfam_desc Domain of unknown function (DUF4156);
pfam_id DUF4156;
pfam_target db:Pfam-A.hmm|PF13698.6 evalue:7.1e-11 score:41.5 best_domain_score:41.3 name:DUF4156;
sp YES;
86600 86701 lipoprotein_signal_peptide
ID metaerg.pl|08454
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
88147 86984 CDS
ID metaerg.pl|08455
allgo_ids GO:0016021; GO:0005886;
allko_ids K07112;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Bradyrhizobium;s__Bradyrhizobium retamae;
genomedb_acc GCF_001440415.1;
genomedb_target db:genomedb|GCF_001440415.1|WP_082637431.1 3 386 evalue:1.2e-97 qcov:99.20 identity:49.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
pfam_acc PF04143;
pfam_desc Sulphur transport;
pfam_id Sulf_transp;
pfam_target db:Pfam-A.hmm|PF04143.14 evalue:2.4e-61 score:207.2 best_domain_score:207.2 name:Sulf_transp;
sprot_desc hypothetical protein;
sprot_id sp|P33015|YEEE_ECOLI;
sprot_target db:uniprot_sprot|sp|P33015|YEEE_ECOLI 35 377 evalue:5.8e-17 qcov:88.60 identity:26.70;
tm_num 10;
88147 86984 transmembrane_helix
ID metaerg.pl|08456
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.146076; 61.1517; 0.0140704; 60.9915; ;
topology i87002-87055o87083-87151i87185-87253o87296-87364i87398-87466o87524-87592i87671-87727o87878-87946i87983-88051o88061-88129i;
>Feature NODE_58_length_88179_cov_12.7286
290 1276 CDS
ID metaerg.pl|08457
allec_ids 1.11.1.5;
allgo_ids GO:0016491; GO:0055114; GO:0042597; GO:0004130; GO:0009055; GO:0020037; GO:0046872;
allko_ids K00428;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF58330.1 1 328 evalue:1.2e-170 qcov:100.00 identity:88.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF03150; PF00034;
pfam_desc Di-haem cytochrome c peroxidase; Cytochrome c;
pfam_id CCP_MauG; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF03150.14 evalue:4.5e-50 score:169.4 best_domain_score:158.8 name:CCP_MauG; db:Pfam-A.hmm|PF00034.21 evalue:5.7e-07 score:29.8 best_domain_score:22.7 name:Cytochrom_C;
sp YES;
sprot_desc Cytochrome c551 peroxidase;
sprot_id sp|P55929|CCPR_NITEU;
sprot_target db:uniprot_sprot|sp|P55929|CCPR_NITEU 3 328 evalue:6.7e-67 qcov:99.40 identity:42.30;
290 361 signal_peptide
ID metaerg.pl|08458
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
2350 1358 CDS
ID metaerg.pl|08459
allec_ids 3.5.4.2; 3.5.4.4;
allgo_ids GO:0019239; GO:0000034; GO:0008270; GO:0006146; GO:0043103; GO:0009117;
allko_ids K01488; K21053;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693372.1 1 329 evalue:3.6e-170 qcov:99.70 identity:89.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY0-1296; PWY-6353; SALVADEHYPOX-PWY; P121-PWY;
metacyc_pathway_name purine ribonucleosides degradation;; purine nucleotides degradation II (aerobic);; adenosine nucleotides degradation II;; adenine and adenosine salvage I;;
metacyc_pathway_type Purine-Degradation;; Purine-Degradation; Super-Pathways;; Adenosine-Nucleotides-Degradation;; Adenine-Adenosine-Salvage;;
pfam_acc PF00962;
pfam_desc Adenosine/AMP deaminase;
pfam_id A_deaminase;
pfam_target db:Pfam-A.hmm|PF00962.22 evalue:8.6e-69 score:231.6 best_domain_score:231.4 name:A_deaminase;
sprot_desc Adenine deaminase;
sprot_id sp|Q2RWC5|ADE_RHORT;
sprot_target db:uniprot_sprot|sp|Q2RWC5|ADE_RHORT 4 329 evalue:3.0e-99 qcov:98.80 identity:55.80;
tigrfam_acc TIGR01430;
tigrfam_desc adenosine deaminase;
tigrfam_name aden_deam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01430 evalue:1.4e-103 score:345.5 best_domain_score:345.3 name:TIGR01430;
4092 2386 CDS
ID metaerg.pl|08460
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0043190; GO:0005887; GO:0016887; GO:0045454; GO:0033228; GO:0034775; GO:0070453;
allko_ids K01995; K10111; K02052; K02006; K02045; K06861; K01996; K16012;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008956269.1 1 568 evalue:8.7e-233 qcov:100.00 identity:76.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:1.4e-09 score:37.3 best_domain_score:37.1 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:3.3e-28 score:98.1 best_domain_score:97.5 name:ABC_tran;
sprot_desc ATP-binding/permease protein CydC;
sprot_id sp|P23886|CYDC_ECOLI;
sprot_target db:uniprot_sprot|sp|P23886|CYDC_ECOLI 5 546 evalue:1.5e-58 qcov:95.40 identity:32.20;
tigrfam_acc TIGR02868;
tigrfam_desc thiol reductant ABC exporter, CydC subunit;
tigrfam_name CydC;
tigrfam_target db:TIGRFAMs.hmm|TIGR02868 evalue:4.5e-115 score:384.4 best_domain_score:384.1 name:TIGR02868;
tm_num 6;
4092 2386 transmembrane_helix
ID metaerg.pl|08461
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i2443-2511o2554-2622i2818-2886o2899-2967i3145-3213o3226-3294i;
5759 4089 CDS
ID metaerg.pl|08462
allgo_ids GO:0005524; GO:0043190; GO:0005887; GO:0016020; GO:0005886; GO:0016887; GO:0042626; GO:0045454; GO:0033228; GO:0034775;
allko_ids K06861; K01996; K02045; K02006; K16013;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007114372.1 1 554 evalue:1.5e-248 qcov:99.60 identity:82.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF13304; PF00664; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter transmembrane region; ABC transporter;
pfam_id AAA_21; ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.3e-10 score:39.5 best_domain_score:24.6 name:AAA_21; db:Pfam-A.hmm|PF00664.23 evalue:1.4e-25 score:89.7 best_domain_score:89.2 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:1e-22 score:80.4 best_domain_score:79.7 name:ABC_tran;
sprot_desc ATP-binding/permease protein CydD;
sprot_id sp|P29018|CYDD_ECOLI;
sprot_target db:uniprot_sprot|sp|P29018|CYDD_ECOLI 14 532 evalue:1.1e-88 qcov:93.30 identity:39.00;
tigrfam_acc TIGR02857;
tigrfam_desc thiol reductant ABC exporter, CydD subunit;
tigrfam_name CydD;
tigrfam_target db:TIGRFAMs.hmm|TIGR02857 evalue:6.3e-160 score:532.7 best_domain_score:532.5 name:TIGR02857;
tm_num 5;
5759 4089 transmembrane_helix
ID metaerg.pl|08463
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i4173-4241o4251-4319i4524-4577o4587-4655i4827-4895o;
6771 5764 CDS
ID metaerg.pl|08464
allec_ids 7.1.1.7; 1.10.3.-;
allgo_ids GO:0016020; GO:0055114; GO:0016021; GO:0005886; GO:0046872; GO:0006119;
allko_ids K00426;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078087705.1 3 335 evalue:4.1e-182 qcov:99.40 identity:92.50;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metabolic_acc TIGR00203;
metabolic_process compound:Oxygen;process:Cytochrome (quinone) oxidase, bd type;gene:CydB;;
metabolic_target db:metabolic.hmm|TIGR00203 evalue:1.2e-46 score:158.8 best_domain_score:128.7 name:TIGR00203;
metacyc_pathway_id PWY-5439; PWY-5466; PWY-5405; PWY-5787; PWY-5404; PWY-5476;
metacyc_pathway_name betacyanin biosynthesis (via dopamine);; matairesinol biosynthesis;; superpathway of betalain biosynthesis;; oligomeric urushiol biosynthesis;; betaxanthin biosynthesis (via dopaxanthin);; cornusiin E biosynthesis;;
metacyc_pathway_type BETALAIN-ALKALOIDS;; LIGNAN-SYN;; BETALAIN-ALKALOIDS; Super-Pathways;; AROMATIC-COMPOUNDS-BIOSYN;; BETALAIN-ALKALOIDS;; ELLAGITANNINS;;
pfam_acc PF02322;
pfam_desc Cytochrome bd terminal oxidase subunit II;
pfam_id Cyt_bd_oxida_II;
pfam_target db:Pfam-A.hmm|PF02322.15 evalue:6e-94 score:314.0 best_domain_score:313.9 name:Cyt_bd_oxida_II;
sprot_desc Cytochrome bd-I ubiquinol oxidase subunit 2;
sprot_id sp|P0ABK4|CYDB_ECO57;
sprot_target db:uniprot_sprot|sp|P0ABK4|CYDB_ECO57 8 328 evalue:4.2e-32 qcov:95.80 identity:28.10;
tigrfam_acc TIGR00203;
tigrfam_desc cytochrome d ubiquinol oxidase, subunit II;
tigrfam_mainrole Energy metabolism;
tigrfam_name cydB;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR00203 evalue:1.2e-46 score:158.8 best_domain_score:128.7 name:TIGR00203;
tm_num 8;
6771 5764 transmembrane_helix
ID metaerg.pl|08465
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i5782-5850o5992-6060i6118-6186o6244-6312i6349-6417o6445-6504i6541-6609o6667-6735i;
8189 6774 CDS
ID metaerg.pl|08466
allec_ids 1.10.3.-;
allgo_ids GO:0009055; GO:0019646; GO:0070069; GO:0016021; GO:0005886; GO:0020037; GO:0046872; GO:0016682;
allko_ids K00425;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078087706.1 1 471 evalue:1.5e-254 qcov:100.00 identity:92.80;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY-5439; PWY-5466; PWY-5405; PWY-5787; PWY-5404; PWY-5476;
metacyc_pathway_name betacyanin biosynthesis (via dopamine);; matairesinol biosynthesis;; superpathway of betalain biosynthesis;; oligomeric urushiol biosynthesis;; betaxanthin biosynthesis (via dopaxanthin);; cornusiin E biosynthesis;;
metacyc_pathway_type BETALAIN-ALKALOIDS;; LIGNAN-SYN;; BETALAIN-ALKALOIDS; Super-Pathways;; AROMATIC-COMPOUNDS-BIOSYN;; BETALAIN-ALKALOIDS;; ELLAGITANNINS;;
pfam_acc PF01654;
pfam_desc Cytochrome bd terminal oxidase subunit I;
pfam_id Cyt_bd_oxida_I;
pfam_target db:Pfam-A.hmm|PF01654.17 evalue:8.7e-157 score:521.2 best_domain_score:521.1 name:Cyt_bd_oxida_I;
sprot_desc Cytochrome bd ubiquinol oxidase subunit 1;
sprot_id sp|P94364|CYDA_BACSU;
sprot_target db:uniprot_sprot|sp|P94364|CYDA_BACSU 3 434 evalue:5.5e-70 qcov:91.70 identity:32.80;
tm_num 9;
8189 6774 transmembrane_helix
ID metaerg.pl|08467
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology o6831-6899i6933-7001o7059-7127i7146-7214o7320-7388i7425-7484o7731-7799i7860-7928o7986-8054i;
9420 8443 CDS
ID metaerg.pl|08468
allgo_ids GO:0016021; GO:0055085; GO:0005886; GO:0015297;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87610.1 1 325 evalue:1.5e-152 qcov:100.00 identity:90.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF01699;
pfam_desc Sodium/calcium exchanger protein;
pfam_id Na_Ca_ex;
pfam_target db:Pfam-A.hmm|PF01699.24 evalue:3.6e-57 score:191.8 best_domain_score:110.0 name:Na_Ca_ex;
sp YES;
sprot_desc Putative antiporter CaxA;
sprot_id sp|Q0ZAI3|CAXA_ALKAM;
sprot_target db:uniprot_sprot|sp|Q0ZAI3|CAXA_ALKAM 1 313 evalue:2.3e-59 qcov:96.30 identity:45.20;
tigrfam_acc TIGR00367;
tigrfam_desc K+-dependent Na+/Ca+ exchanger homolog;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00367;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00367 evalue:2.3e-70 score:236.3 best_domain_score:236.1 name:TIGR00367;
tm_num 9;
8443 8496 signal_peptide
ID metaerg.pl|08469
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
9420 8443 transmembrane_helix
ID metaerg.pl|08470
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i8446-8499o8557-8625i8662-8730o8809-8877i8962-9021o9064-9132i9151-9219o9262-9315i9352-9411o;
9952 11094 CDS
ID metaerg.pl|08471
allgo_ids GO:0016021; GO:0005886;
allko_ids K03808;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI67507.1 1 380 evalue:2.3e-181 qcov:100.00 identity:86.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF04403;
pfam_desc Paraquat-inducible protein A;
pfam_id PqiA;
pfam_target db:Pfam-A.hmm|PF04403.13 evalue:1e-96 score:320.3 best_domain_score:199.9 name:PqiA;
sprot_desc Intermembrane transport protein PqiA;
sprot_id sp|P0AFM0|PQIA_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AFM0|PQIA_ECOL6 2 372 evalue:8.9e-63 qcov:97.60 identity:39.60;
tigrfam_acc TIGR00155;
tigrfam_desc integral membrane protein, PqiA family;
tigrfam_mainrole Unknown function;
tigrfam_name pqiA_fam;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00155 evalue:1.7e-90 score:303.2 best_domain_score:303.0 name:TIGR00155;
tm_num 8;
9952 11094 transmembrane_helix
ID metaerg.pl|08472
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i9964-10032o10090-10158i10216-10284o10294-10362i10579-10647o10732-10800i10861-10920o10963-11031i;
11087 12769 CDS
ID metaerg.pl|08473
allgo_ids GO:0016021; GO:0030288; GO:0005886; GO:0042802; GO:0120009;
allko_ids K02067; K06192;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis_A;
genomedb_acc GCF_002211105.1;
genomedb_target db:genomedb|GCF_002211105.1|WP_088700039.1 1 560 evalue:1.6e-292 qcov:100.00 identity:90.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF02470;
pfam_desc MlaD protein;
pfam_id MlaD;
pfam_target db:Pfam-A.hmm|PF02470.20 evalue:1.1e-33 score:114.7 best_domain_score:42.9 name:MlaD;
sprot_desc Intermembrane transport protein PqiB;
sprot_id sp|P43671|PQIB_ECOLI;
sprot_target db:uniprot_sprot|sp|P43671|PQIB_ECOLI 14 560 evalue:1.9e-122 qcov:97.70 identity:40.50;
tm_num 1;
11087 12769 transmembrane_helix
ID metaerg.pl|08474
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i11168-11227o;
12780 13409 CDS
ID metaerg.pl|08475
allgo_ids GO:0036406; GO:0030288; GO:0042802;
allko_ids K09857;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002332255;
genomedb_acc GCF_002332255.1;
genomedb_target db:genomedb|GCF_002332255.1|WP_096279800.1 9 209 evalue:4.1e-79 qcov:96.20 identity:75.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF03886;
pfam_desc ABC-type transport auxiliary lipoprotein component;
pfam_id ABC_trans_aux;
pfam_target db:Pfam-A.hmm|PF03886.13 evalue:2e-35 score:121.0 best_domain_score:120.8 name:ABC_trans_aux;
sp YES;
sprot_desc Intermembrane transport lipoprotein PqiC;
sprot_id sp|P0AB10|PQIC_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AB10|PQIC_ECOLI 19 203 evalue:2.9e-15 qcov:88.50 identity:32.60;
12780 12878 lipoprotein_signal_peptide
ID metaerg.pl|08476
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
13446 13913 CDS
ID metaerg.pl|08477
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693380.1 1 153 evalue:1.3e-42 qcov:98.70 identity:64.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF14520;
pfam_desc Helix-hairpin-helix domain;
pfam_id HHH_5;
pfam_target db:Pfam-A.hmm|PF14520.6 evalue:4e-07 score:29.8 best_domain_score:28.6 name:HHH_5;
14219 15475 CDS
ID metaerg.pl|08478
allec_ids 3.6.4.13;
allgo_ids GO:0003676; GO:0005524; GO:0005829; GO:0004004; GO:0003723; GO:0009408; GO:0042255;
allko_ids K10896; K12835; K11594; K13182; K11927; K13177; K05590; K01509; K12823; K12812; K03257; K05591; K13131; K12858; K13179; K13178; K13025; K12811; K13982; K01529; K13116; K12614; K05592; K13181; K03732;
casgene_acc cd09639_cas3_CAS-I;
casgene_name cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:2.8e-07 score:29.2 best_domain_score:26.6 name:cas3;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007114379.1 1 418 evalue:4.6e-223 qcov:100.00 identity:96.90;
kegg_pathway_id 00790; 00230;
kegg_pathway_name Folate biosynthesis; Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF13245; PF00270; PF00271; PF04851;
pfam_desc AAA domain; DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit;
pfam_id AAA_19; DEAD; Helicase_C; ResIII;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:7.6e-09 score:35.3 best_domain_score:19.1 name:AAA_19; db:Pfam-A.hmm|PF00270.29 evalue:3.7e-50 score:169.4 best_domain_score:168.1 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:5.7e-27 score:93.5 best_domain_score:90.4 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:4.2e-05 score:22.9 best_domain_score:21.3 name:ResIII;
sprot_desc ATP-dependent RNA helicase RhlE;
sprot_id sp|P25888|RHLE_ECOLI;
sprot_target db:uniprot_sprot|sp|P25888|RHLE_ECOLI 1 392 evalue:1.2e-148 qcov:93.80 identity:67.30;
15584 16087 CDS
ID metaerg.pl|08479
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF58342.1 1 167 evalue:6.8e-85 qcov:100.00 identity:94.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
16096 17319 CDS
ID metaerg.pl|08480
allgo_ids GO:0016021; GO:0055085; GO:0005886;
allko_ids K08219; K08217; K03449;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035557555.1 1 400 evalue:2.1e-180 qcov:98.30 identity:85.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:8.1e-22 score:76.8 best_domain_score:76.8 name:MFS_1;
sprot_desc Uncharacterized transporter YycB;
sprot_id sp|P37482|YYCB_BACSU;
sprot_target db:uniprot_sprot|sp|P37482|YYCB_BACSU 8 373 evalue:1.4e-45 qcov:89.90 identity:34.60;
tm_num 12;
16096 17319 transmembrane_helix
ID metaerg.pl|08481
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i16114-16170o16213-16281i16318-16371o16384-16452i16486-16554o16582-16635i16723-16791o16819-16887i16906-16974o16984-17052i17086-17154o17182-17241i;
17322 18392 CDS
ID metaerg.pl|08482
allec_ids 3.5.1.1;
allgo_ids GO:0005737; GO:0004067; GO:0006520;
allko_ids K13278; K01424;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF58344.1 1 356 evalue:1.2e-166 qcov:100.00 identity:80.10;
kegg_pathway_id 00910; 00252; 00460;
kegg_pathway_name Nitrogen metabolism; Alanine and aspartate metabolism; Cyanoamino acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id ASPASN-PWY; ASPARAGINE-DEG1-PWY;
metacyc_pathway_name superpathway of L-aspartate and L-asparagine biosynthesis;; L-asparagine degradation I;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Metabolic-Clusters; Super-Pathways;; ASPARAGINE-DEG;;
pfam_acc PF00710; PF17763;
pfam_desc Asparaginase, N-terminal; Glutaminase/Asparaginase C-terminal domain;
pfam_id Asparaginase; Asparaginase_C;
pfam_target db:Pfam-A.hmm|PF00710.20 evalue:1.6e-53 score:180.4 best_domain_score:179.9 name:Asparaginase; db:Pfam-A.hmm|PF17763.1 evalue:2.4e-19 score:68.9 best_domain_score:67.9 name:Asparaginase_C;
sprot_desc L-asparaginase 1;
sprot_id sp|P0A963|ASPG1_ECO57;
sprot_target db:uniprot_sprot|sp|P0A963|ASPG1_ECO57 17 355 evalue:1.9e-54 qcov:95.20 identity:35.90;
18492 18731 CDS
ID metaerg.pl|08483
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002366715;
genomedb_acc GCA_002366715.1;
genomedb_target db:genomedb|GCA_002366715.1|DFBS01000011.1_15 1 79 evalue:1.5e-34 qcov:100.00 identity:92.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF10982;
pfam_desc Protein of unknown function (DUF2789);
pfam_id DUF2789;
pfam_target db:Pfam-A.hmm|PF10982.8 evalue:4.6e-32 score:109.3 best_domain_score:109.1 name:DUF2789;
19413 18748 CDS
ID metaerg.pl|08484
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87601.1 1 219 evalue:7.6e-108 qcov:99.10 identity:90.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF09335;
pfam_desc SNARE associated Golgi protein;
pfam_id SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF09335.11 evalue:5.6e-13 score:48.7 best_domain_score:47.6 name:SNARE_assoc;
tm_num 5;
19413 18748 transmembrane_helix
ID metaerg.pl|08485
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology o18775-18828i18889-18957o18985-19053i19216-19284o19312-19380i;
19822 19406 CDS
ID metaerg.pl|08486
allko_ids K00626;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233548.1 1 138 evalue:1.6e-63 qcov:100.00 identity:89.10;
kegg_pathway_id 00632; 00380; 00310; 00280; 00640; 00650; 00071; 02020; 00620; 00072;
kegg_pathway_name Benzoate degradation via CoA ligation; Tryptophan metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Propanoate metabolism; Butanoate metabolism; Fatty acid metabolism; Two-component system - General; Pyruvate metabolism; Synthesis and degradation of ketone bodies;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF03364; PF10604;
pfam_desc Polyketide cyclase / dehydrase and lipid transport; Polyketide cyclase / dehydrase and lipid transport;
pfam_id Polyketide_cyc; Polyketide_cyc2;
pfam_target db:Pfam-A.hmm|PF03364.20 evalue:2e-10 score:40.2 best_domain_score:39.9 name:Polyketide_cyc; db:Pfam-A.hmm|PF10604.9 evalue:8.5e-15 score:54.5 best_domain_score:54.4 name:Polyketide_cyc2;
20073 20786 CDS
ID metaerg.pl|08487
allec_ids 6.3.4.20;
allgo_ids GO:0004066; GO:0006529; GO:0005524; GO:0016879; GO:0008270; GO:0008616;
allko_ids K06920;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008956254.1 1 237 evalue:2.7e-111 qcov:100.00 identity:86.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF00733; PF06508;
pfam_desc Asparagine synthase; Queuosine biosynthesis protein QueC;
pfam_id Asn_synthase; QueC;
pfam_target db:Pfam-A.hmm|PF00733.21 evalue:0.0002 score:20.4 best_domain_score:19.8 name:Asn_synthase; db:Pfam-A.hmm|PF06508.13 evalue:1.4e-62 score:210.1 best_domain_score:210.0 name:QueC;
sprot_desc 7-cyano-7-deazaguanine synthase;
sprot_id sp|Q1QVW9|QUEC_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QVW9|QUEC_CHRSD 15 228 evalue:7.2e-87 qcov:90.30 identity:73.40;
tigrfam_acc TIGR00364;
tigrfam_desc queuosine biosynthesis protein QueC;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00364;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00364 evalue:5.9e-60 score:201.4 best_domain_score:201.2 name:TIGR00364;
20786 21430 CDS
ID metaerg.pl|08488
allec_ids 4.3.99.3;
allgo_ids GO:0051539; GO:0016840; GO:0000287; GO:1904047; GO:0008616;
allko_ids K10026;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035579601.1 1 214 evalue:2.1e-107 qcov:100.00 identity:86.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF13353; PF13394;
pfam_desc 4Fe-4S single cluster domain; 4Fe-4S single cluster domain;
pfam_id Fer4_12; Fer4_14;
pfam_target db:Pfam-A.hmm|PF13353.6 evalue:9.8e-06 score:25.1 best_domain_score:24.3 name:Fer4_12; db:Pfam-A.hmm|PF13394.6 evalue:1.9e-06 score:27.3 best_domain_score:25.8 name:Fer4_14;
sprot_desc 7-carboxy-7-deazaguanine synthase;
sprot_id sp|Q7VVJ8|QUEE_BORPE;
sprot_target db:uniprot_sprot|sp|Q7VVJ8|QUEE_BORPE 2 212 evalue:1.8e-76 qcov:98.60 identity:65.90;
tigrfam_acc TIGR04508;
tigrfam_desc 7-carboxy-7-deazaguanine synthase;
tigrfam_name queE_Cx14CxxC;
tigrfam_target db:TIGRFAMs.hmm|TIGR04508 evalue:2.8e-103 score:343.4 best_domain_score:343.2 name:TIGR04508;
21430 22275 CDS
ID metaerg.pl|08489
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87597.1 1 280 evalue:4.8e-131 qcov:99.60 identity:79.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF01242;
pfam_desc 6-pyruvoyl tetrahydropterin synthase;
pfam_id PTPS;
pfam_target db:Pfam-A.hmm|PF01242.19 evalue:1e-15 score:57.0 best_domain_score:31.3 name:PTPS;
22272 22529 CDS
ID metaerg.pl|08490
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF58350.1 1 84 evalue:7.1e-38 qcov:98.80 identity:86.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF03692;
pfam_desc Putative zinc- or iron-chelating domain;
pfam_id CxxCxxCC;
pfam_target db:Pfam-A.hmm|PF03692.15 evalue:7.4e-08 score:32.2 best_domain_score:31.5 name:CxxCxxCC;
sp YES;
22272 22334 signal_peptide
ID metaerg.pl|08491
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
26473 22574 CDS
ID metaerg.pl|08492
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693392.1 1 1299 evalue:0.0e+00 qcov:100.00 identity:94.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF13191;
pfam_desc AAA ATPase domain;
pfam_id AAA_16;
pfam_target db:Pfam-A.hmm|PF13191.6 evalue:1.3e-17 score:63.9 best_domain_score:63.9 name:AAA_16;
27217 26504 CDS
ID metaerg.pl|08493
allec_ids 1.-.-.-;
allgo_ids GO:0006400; GO:0045301;
allko_ids K06169;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035557528.1 10 237 evalue:1.5e-109 qcov:96.20 identity:90.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY-5826; PWY-2821; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987;
metacyc_pathway_name hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;;
pfam_acc PF06175;
pfam_desc tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE);
pfam_id MiaE;
pfam_target db:Pfam-A.hmm|PF06175.11 evalue:4.7e-72 score:241.7 best_domain_score:195.7 name:MiaE;
sprot_desc tRNA-(ms[2]io[6]A)-hydroxylase;
sprot_id sp|Q08015|MIAE_SALTY;
sprot_target db:uniprot_sprot|sp|Q08015|MIAE_SALTY 46 237 evalue:1.6e-41 qcov:81.00 identity:42.70;
27718 30321 CDS
ID metaerg.pl|08494
allec_ids 4.2.1.3;
allgo_ids GO:0003994; GO:0006099; GO:0005829; GO:0047456; GO:0051539; GO:0046872; GO:0003730; GO:0003729; GO:0019629;
allko_ids K01702; K01681; K01703; K01682; K01704;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87594.1 1 867 evalue:0.0e+00 qcov:100.00 identity:97.60;
kegg_pathway_id 00720; 00290; 00020; 00630;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Valine, leucine and isoleucine biosynthesis; Citrate cycle (TCA cycle); Glyoxylate and dicarboxylate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id GLYOXYLATE-BYPASS; FERMENTATION-PWY; PWY-5392; REDCITCYC; PWY-561; GLYCOLYSIS-TCA-GLYOX-BYPASS; P23-PWY; PWY-5464; PWY-6549; P105-PWY; PWY-5690; ANARESP1-PWY; TCA-GLYOX-BYPASS; TCA; PWY-5750; PWY-5913;
metacyc_pathway_name glyoxylate cycle;; mixed acid fermentation;; reductive TCA cycle II;; TCA cycle VIII (Helicobacter);; superpathway of glyoxylate cycle and fatty acid degradation;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; reductive TCA cycle I;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; L-glutamine biosynthesis III;; TCA cycle IV (2-oxoglutarate decarboxylase);; TCA cycle II (plants and fungi);; ; superpathway of glyoxylate bypass and TCA;; TCA cycle I (prokaryotic);; itaconate biosynthesis I;; partial TCA cycle (obligate autotrophs);;
metacyc_pathway_type Energy-Metabolism;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Reductive-TCA-Cycles;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; GLUTAMINE-SYN;; TCA-VARIANTS;; TCA-VARIANTS;; ; Super-Pathways; TCA-VARIANTS;; TCA-VARIANTS;; Itaconate-Biosynthesis;; TCA-VARIANTS;;
pfam_acc PF00330; PF06434; PF11791;
pfam_desc Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; Aconitate B N-terminal domain;
pfam_id Aconitase; Aconitase_2_N; Aconitase_B_N;
pfam_target db:Pfam-A.hmm|PF00330.20 evalue:3.7e-43 score:147.4 best_domain_score:141.7 name:Aconitase; db:Pfam-A.hmm|PF06434.13 evalue:1.2e-97 score:324.7 best_domain_score:324.1 name:Aconitase_2_N; db:Pfam-A.hmm|PF11791.8 evalue:7.8e-67 score:223.4 best_domain_score:222.6 name:Aconitase_B_N;
sprot_desc Aconitate hydratase B;
sprot_id sp|Q9I2V5|ACNB_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I2V5|ACNB_PSEAE 1 865 evalue:0.0e+00 qcov:99.80 identity:79.50;
tigrfam_acc TIGR00117;
tigrfam_desc aconitate hydratase 2;
tigrfam_mainrole Energy metabolism;
tigrfam_name acnB;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR00117 evalue:0 score:1534.7 best_domain_score:1534.5 name:TIGR00117;
30533 31027 CDS
ID metaerg.pl|08495
allec_ids 4.1.3.17;
allgo_ids GO:0047443; GO:0046872; GO:0008428; GO:0051252;
allko_ids K02553;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI67493.1 1 163 evalue:9.4e-79 qcov:99.40 identity:88.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id METHYLGALLATE-DEGRADATION-PWY; GALLATE-DEGRADATION-I-PWY;
metacyc_pathway_name methylgallate degradation;; gallate degradation II;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;; GALLATE-DEG;;
pfam_acc PF03737;
pfam_desc Aldolase/RraA;
pfam_id RraA-like;
pfam_target db:Pfam-A.hmm|PF03737.15 evalue:4.8e-45 score:152.6 best_domain_score:152.4 name:RraA-like;
sprot_desc Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase;
sprot_id sp|Q3KFE1|RRAAH_PSEPF;
sprot_target db:uniprot_sprot|sp|Q3KFE1|RRAAH_PSEPF 4 164 evalue:1.6e-56 qcov:98.20 identity:62.30;
tigrfam_acc TIGR01935;
tigrfam_desc RraA family;
tigrfam_mainrole Unknown function;
tigrfam_name NOT-MenG;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR01935 evalue:4.3e-63 score:210.8 best_domain_score:210.6 name:TIGR01935;
31097 32983 CDS
ID metaerg.pl|08496
allgo_ids GO:0006629; GO:0008081;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008956246.1 1 628 evalue:0.0e+00 qcov:100.00 identity:86.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF03009; PF13653; PF10110;
pfam_desc Glycerophosphoryl diester phosphodiesterase family; Glycerophosphoryl diester phosphodiesterase family; Membrane domain of glycerophosphoryl diester phosphodiesterase;
pfam_id GDPD; GDPD_2; GPDPase_memb;
pfam_target db:Pfam-A.hmm|PF03009.17 evalue:1.3e-35 score:122.7 best_domain_score:121.0 name:GDPD; db:Pfam-A.hmm|PF13653.6 evalue:4.5e-08 score:32.6 best_domain_score:31.1 name:GDPD_2; db:Pfam-A.hmm|PF10110.9 evalue:6.6e-21 score:73.6 best_domain_score:71.7 name:GPDPase_memb;
tm_num 7;
31097 32983 transmembrane_helix
ID metaerg.pl|08497
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i31163-31231o31289-31357i31469-31537o31595-31663i31769-31837o31895-31963i32057-32116o;
34800 33010 CDS
ID metaerg.pl|08498
allec_ids 3.4.19.13; 2.3.2.2;
allgo_ids GO:0005576; GO:0036374; GO:0102953; GO:0103068; GO:0006750; GO:0006751;
allko_ids K00681;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002332255;
genomedb_acc GCF_002332255.1;
genomedb_target db:genomedb|GCF_002332255.1|WP_096279766.1 1 596 evalue:0.0e+00 qcov:100.00 identity:88.40;
kegg_pathway_id 00480; 00590; 00450; 00460; 00430;
kegg_pathway_name Glutathione metabolism; Arachidonic acid metabolism; Selenoamino acid metabolism; Cyanoamino acid metabolism; Taurine and hypotaurine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY-4041; PWY-5826;
metacyc_pathway_name γ-glutamyl cycle;; hypoglycin biosynthesis;;
metacyc_pathway_type Reductants; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;;
pfam_acc PF01019;
pfam_desc Gamma-glutamyltranspeptidase;
pfam_id G_glu_transpept;
pfam_target db:Pfam-A.hmm|PF01019.21 evalue:1.5e-140 score:468.6 best_domain_score:468.5 name:G_glu_transpept;
sp YES;
sprot_desc Glutathione hydrolase proenzyme;
sprot_id sp|P54422|GGT_BACSU;
sprot_target db:uniprot_sprot|sp|P54422|GGT_BACSU 51 595 evalue:2.5e-80 qcov:91.40 identity:35.50;
tigrfam_acc TIGR00066;
tigrfam_desc gamma-glutamyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name g_glut_trans;
tigrfam_sub1role Glutathione and analogs;
tigrfam_target db:TIGRFAMs.hmm|TIGR00066 evalue:9.9e-111 score:369.9 best_domain_score:369.6 name:TIGR00066;
33010 33081 signal_peptide
ID metaerg.pl|08499
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
37372 34988 CDS
ID metaerg.pl|08500
allec_ids 2.7.9.2;
allgo_ids GO:0016310; GO:0016772; GO:0005524; GO:0046872; GO:0008986; GO:0006094; GO:0006090;
allko_ids K02768; K08484; K01006; K02821; K02812; K02806; K08483; K00873; K02744; K02793; K11183; K01007; K11201; K02794; K11189;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035557634.1 1 794 evalue:0.0e+00 qcov:100.00 identity:96.50;
kegg_pathway_id 00010; 00710; 00720; 02060; 00620; 00230;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Reductive carboxylate cycle (CO2 fixation); Phosphotransferase system (PTS); Pyruvate metabolism; Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY-5484; GLYCOLYSIS-E-D; P461-PWY; GLYCOLYSIS; GLUCONEO-PWY; P441-PWY; ANAEROFRUCAT-PWY; P23-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS;
metacyc_pathway_name glycolysis II (from fructose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis I (from glucose 6-phosphate);; gluconeogenesis I;; superpathway of N-acetylneuraminate degradation;; homolactic fermentation;; reductive TCA cycle I;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;;
metacyc_pathway_type GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis;; CARBOXYLATES-DEG; Super-Pathways;; Fermentation-to-Lactate; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00391; PF02896; PF01326;
pfam_desc PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain;
pfam_id PEP-utilizers; PEP-utilizers_C; PPDK_N;
pfam_target db:Pfam-A.hmm|PF00391.23 evalue:1.6e-26 score:91.0 best_domain_score:90.0 name:PEP-utilizers; db:Pfam-A.hmm|PF02896.18 evalue:9.6e-66 score:221.1 best_domain_score:220.3 name:PEP-utilizers_C; db:Pfam-A.hmm|PF01326.19 evalue:1.8e-119 score:398.1 best_domain_score:397.6 name:PPDK_N;
sprot_desc Phosphoenolpyruvate synthase;
sprot_id sp|Q02KR1|PPSA_PSEAB;
sprot_target db:uniprot_sprot|sp|Q02KR1|PPSA_PSEAB 1 789 evalue:0.0e+00 qcov:99.40 identity:74.30;
tigrfam_acc TIGR01418;
tigrfam_desc phosphoenolpyruvate synthase;
tigrfam_mainrole Energy metabolism;
tigrfam_name PEP_synth;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01418 evalue:0 score:1192.8 best_domain_score:1192.5 name:TIGR01418;
37667 38569 CDS
ID metaerg.pl|08501
allec_ids 2.7.11.33;
allgo_ids GO:0005524; GO:0016772; GO:0043531; GO:0016776; GO:0004674; GO:0006470;
allko_ids K09773;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002332255;
genomedb_acc GCF_002332255.1;
genomedb_target db:genomedb|GCF_002332255.1|WP_096279762.1 24 300 evalue:1.7e-147 qcov:92.30 identity:96.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF03618;
pfam_desc Kinase/pyrophosphorylase;
pfam_id Kinase-PPPase;
pfam_target db:Pfam-A.hmm|PF03618.14 evalue:9.1e-76 score:254.2 best_domain_score:254.0 name:Kinase-PPPase;
sprot_desc Putative phosphoenolpyruvate synthase regulatory protein;
sprot_id sp|Q1QVU4|PSRP_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QVU4|PSRP_CHRSD 24 300 evalue:1.1e-124 qcov:92.30 identity:79.40;
39169 38591 CDS
ID metaerg.pl|08502
allec_ids 2.4.2.22;
allgo_ids GO:0009116; GO:0005737; GO:0052657; GO:0004422; GO:0046872; GO:0000166; GO:0000310; GO:0032263; GO:0032264; GO:0032265;
allko_ids K00760;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_007114399.1 1 192 evalue:6.4e-103 qcov:100.00 identity:97.40;
kegg_pathway_id 00230; 00983;
kegg_pathway_name Purine metabolism; Drug metabolism - other enzymes;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id SALVPURINE2-PWY;
metacyc_pathway_name xanthine and xanthosine salvage;;
metacyc_pathway_type Purine-Nucleotides-Salvage;;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:3.8e-20 score:71.2 best_domain_score:70.8 name:Pribosyltran;
sprot_desc Hypoxanthine-guanine-xanthine phosphoribosyltransferase;
sprot_id sp|P51900|HGXR_TRIFO;
sprot_target db:uniprot_sprot|sp|P51900|HGXR_TRIFO 18 186 evalue:8.1e-20 qcov:88.00 identity:32.40;
40264 39248 CDS
ID metaerg.pl|08503
allec_ids 3.2.1.52;
allgo_ids GO:0004553; GO:0005975; GO:0005737; GO:0004563; GO:0102148; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0009254; GO:0008360;
allko_ids K01207;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF58360.1 1 338 evalue:5.8e-176 qcov:100.00 identity:91.70;
kegg_pathway_id 01032; 00530;
kegg_pathway_name Glycan structures - degradation; Aminosugars metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY-6573;
metacyc_pathway_name chondroitin sulfate degradation (metazoa);;
metacyc_pathway_type Glycan-Degradation; Glycosaminoglycan-Degradation;;
pfam_acc PF00933;
pfam_desc Glycosyl hydrolase family 3 N terminal domain;
pfam_id Glyco_hydro_3;
pfam_target db:Pfam-A.hmm|PF00933.21 evalue:1.8e-79 score:266.7 best_domain_score:266.3 name:Glyco_hydro_3;
sprot_desc Beta-hexosaminidase;
sprot_id sp|B7UYS5|NAGZ_PSEA8;
sprot_target db:uniprot_sprot|sp|B7UYS5|NAGZ_PSEA8 6 312 evalue:1.2e-90 qcov:90.80 identity:56.50;
40891 40355 CDS
ID metaerg.pl|08504
allgo_ids GO:0016740;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002366715;
genomedb_acc GCA_002366715.1;
genomedb_target db:genomedb|GCA_002366715.1|DFBS01000011.1_31 1 178 evalue:4.9e-97 qcov:100.00 identity:89.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF03734;
pfam_desc L,D-transpeptidase catalytic domain;
pfam_id YkuD;
pfam_target db:Pfam-A.hmm|PF03734.14 evalue:1.2e-16 score:60.7 best_domain_score:60.3 name:YkuD;
41561 40869 CDS
ID metaerg.pl|08505
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87585.1 1 230 evalue:5.1e-115 qcov:100.00 identity:93.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF17939; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_30; TetR_N;
pfam_target db:Pfam-A.hmm|PF17939.1 evalue:2.9e-29 score:100.8 best_domain_score:96.8 name:TetR_C_30; db:Pfam-A.hmm|PF00440.23 evalue:2.5e-15 score:55.3 best_domain_score:49.7 name:TetR_N;
41828 42505 CDS
ID metaerg.pl|08506
allec_ids 3.4.21.88;
allgo_ids GO:0004252; GO:0006508; GO:0003677; GO:0006281; GO:0006260; GO:0045892; GO:0009432;
allko_ids K01356;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000032.1_213 1 225 evalue:2.5e-114 qcov:100.00 identity:94.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF01726; PF00717;
pfam_desc LexA DNA binding domain; Peptidase S24-like;
pfam_id LexA_DNA_bind; Peptidase_S24;
pfam_target db:Pfam-A.hmm|PF01726.16 evalue:2.1e-27 score:93.9 best_domain_score:93.1 name:LexA_DNA_bind; db:Pfam-A.hmm|PF00717.23 evalue:3e-14 score:52.0 best_domain_score:51.2 name:Peptidase_S24;
sprot_desc LexA repressor;
sprot_id sp|Q1QVT7|LEXA_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QVT7|LEXA_CHRSD 1 224 evalue:1.0e-90 qcov:99.60 identity:75.40;
tigrfam_acc TIGR00498;
tigrfam_desc repressor LexA;
tigrfam_mainrole Regulatory functions;
tigrfam_name lexA;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00498 evalue:4.6e-70 score:234.5 best_domain_score:234.2 name:TIGR00498;
43185 42514 CDS
ID metaerg.pl|08507
allgo_ids GO:0000041; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF59835.1 1 223 evalue:1.7e-107 qcov:100.00 identity:90.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF01891;
pfam_desc Cobalt uptake substrate-specific transmembrane region;
pfam_id CbiM;
pfam_target db:Pfam-A.hmm|PF01891.16 evalue:1.7e-15 score:56.7 best_domain_score:56.4 name:CbiM;
tm_num 6;
43185 42514 transmembrane_helix
ID metaerg.pl|08508
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i42532-42600o42637-42690i42709-42777o42835-42903i42922-43017o43075-43143i;
44076 43222 CDS
ID metaerg.pl|08509
allec_ids 3.5.1.10;
allgo_ids GO:0009058; GO:0016742; GO:0008864; GO:0006189; GO:0006730;
allko_ids K01933; K11787; K11788; K11175; K01945;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87582.1 1 284 evalue:4.5e-161 qcov:100.00 identity:96.50;
kegg_pathway_id 00670; 00230;
kegg_pathway_name One carbon pool by folate; Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id 1CMET2-PWY; PWY-2201;
metacyc_pathway_name N10-formyl-tetrahydrofolate biosynthesis;; folate transformations I;;
metacyc_pathway_type Folate-Biosynthesis;; Folate-Transformations;;
pfam_acc PF01842; PF00551;
pfam_desc ACT domain; Formyl transferase;
pfam_id ACT; Formyl_trans_N;
pfam_target db:Pfam-A.hmm|PF01842.25 evalue:1.3e-08 score:33.7 best_domain_score:32.6 name:ACT; db:Pfam-A.hmm|PF00551.19 evalue:3.9e-39 score:133.5 best_domain_score:133.1 name:Formyl_trans_N;
sprot_desc Formyltetrahydrofolate deformylase;
sprot_id sp|Q46339|PURU_CORS1;
sprot_target db:uniprot_sprot|sp|Q46339|PURU_CORS1 7 282 evalue:4.3e-78 qcov:97.20 identity:49.30;
tigrfam_acc TIGR00655;
tigrfam_desc formyltetrahydrofolate deformylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name PurU;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00655 evalue:2.9e-112 score:374.0 best_domain_score:373.9 name:TIGR00655;
44271 45947 CDS
ID metaerg.pl|08510
allec_ids 3.1.-.-;
allgo_ids GO:0005737; GO:0004534; GO:0004521; GO:0003723; GO:0008270; GO:0006364;
allko_ids K12574;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000032.1_210 1 554 evalue:8.7e-302 qcov:99.30 identity:89.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00753; PF12706; PF07521;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain; Zn-dependent metallo-hydrolase RNA specificity domain;
pfam_id Lactamase_B; Lactamase_B_2; RMMBL;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:6.9e-11 score:41.8 best_domain_score:40.8 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:1e-11 score:44.0 best_domain_score:39.3 name:Lactamase_B_2; db:Pfam-A.hmm|PF07521.12 evalue:3e-10 score:39.1 best_domain_score:30.8 name:RMMBL;
sprot_desc Ribonuclease J;
sprot_id sp|M4MR97|RNJ_SINM2;
sprot_target db:uniprot_sprot|sp|M4MR97|RNJ_SINM2 16 424 evalue:2.5e-90 qcov:73.30 identity:42.70;
46418 45957 CDS
ID metaerg.pl|08511
allec_ids 2.8.1.12;
allgo_ids GO:0006777; GO:0005829; GO:0003824; GO:0030366; GO:0032324;
allko_ids K03635;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035583410.1 1 150 evalue:3.0e-79 qcov:98.00 identity:96.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF02391;
pfam_desc MoaE protein;
pfam_id MoaE;
pfam_target db:Pfam-A.hmm|PF02391.17 evalue:5.9e-35 score:119.2 best_domain_score:119.0 name:MoaE;
sprot_desc Molybdopterin synthase catalytic subunit;
sprot_id sp|Q9KT77|MOAE_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KT77|MOAE_VIBCH 1 150 evalue:3.9e-41 qcov:98.00 identity:57.30;
47217 46420 CDS
ID metaerg.pl|08512
allgo_ids GO:0006777;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI67483.1 1 265 evalue:1.5e-131 qcov:100.00 identity:90.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF01967; PF02597;
pfam_desc MoaC family; ThiS family;
pfam_id MoaC; ThiS;
pfam_target db:Pfam-A.hmm|PF01967.21 evalue:3.6e-56 score:188.2 best_domain_score:187.8 name:MoaC; db:Pfam-A.hmm|PF02597.20 evalue:1.6e-11 score:44.0 best_domain_score:43.1 name:ThiS;
tigrfam_acc TIGR00581;
tigrfam_desc molybdenum cofactor biosynthesis protein C;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name moaC;
tigrfam_sub1role Molybdopterin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00581 evalue:2.1e-63 score:211.7 best_domain_score:211.3 name:TIGR00581;
47859 47317 CDS
ID metaerg.pl|08513
allgo_ids GO:0005525; GO:0006777;
allko_ids K03753;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF59830.1 1 177 evalue:7.4e-77 qcov:98.30 identity:81.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF02492; PF03205;
pfam_desc CobW/HypB/UreG, nucleotide-binding domain; Molybdopterin guanine dinucleotide synthesis protein B;
pfam_id cobW; MobB;
pfam_target db:Pfam-A.hmm|PF02492.19 evalue:3.1e-05 score:22.9 best_domain_score:21.8 name:cobW; db:Pfam-A.hmm|PF03205.14 evalue:1.8e-46 score:156.5 best_domain_score:156.2 name:MobB;
sprot_desc Molybdopterin-guanine dinucleotide biosynthesis adapter protein;
sprot_id sp|P32125|MOBB_ECOLI;
sprot_target db:uniprot_sprot|sp|P32125|MOBB_ECOLI 10 173 evalue:3.1e-37 qcov:91.10 identity:49.10;
tigrfam_acc TIGR00176;
tigrfam_desc molybdopterin-guanine dinucleotide biosynthesis protein B;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name mobB;
tigrfam_sub1role Molybdopterin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00176 evalue:1.1e-41 score:141.6 best_domain_score:141.4 name:TIGR00176;
49140 47908 CDS
ID metaerg.pl|08514
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0015210;
allko_ids K02824;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87577.1 1 410 evalue:6.6e-206 qcov:100.00 identity:94.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF00860;
pfam_desc Permease family;
pfam_id Xan_ur_permease;
pfam_target db:Pfam-A.hmm|PF00860.20 evalue:1.9e-90 score:302.6 best_domain_score:302.1 name:Xan_ur_permease;
sprot_desc Probable uracil permease;
sprot_id sp|Q9CPL9|URAA_PASMU;
sprot_target db:uniprot_sprot|sp|Q9CPL9|URAA_PASMU 13 405 evalue:7.3e-119 qcov:95.90 identity:58.30;
tigrfam_acc TIGR00801;
tigrfam_desc uracil-xanthine permease;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ncs2;
tigrfam_sub1role Nucleosides, purines and pyrimidines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00801 evalue:8.7e-111 score:370.0 best_domain_score:369.7 name:TIGR00801;
tm_num 11;
49140 47908 transmembrane_helix
ID metaerg.pl|08515
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology o47950-48018i48031-48099o48142-48210i48244-48312o48355-48423i48436-48504o48562-48630i48811-48879o48892-48960i48994-49047o49057-49116i;
49853 49224 CDS
ID metaerg.pl|08516
allec_ids 2.4.2.9;
allgo_ids GO:0009116; GO:0005525; GO:0000287; GO:0004845; GO:0044206; GO:0006223;
allko_ids K00761;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas stevensii;
genomedb_acc GCF_000275725.1;
genomedb_target db:genomedb|GCF_000275725.1|WP_016914005.1 1 209 evalue:9.1e-111 qcov:100.00 identity:96.70;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id P1-PWY; PWY0-163;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF00156; PF14681;
pfam_desc Phosphoribosyl transferase domain; Uracil phosphoribosyltransferase;
pfam_id Pribosyltran; UPRTase;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:1.4e-12 score:46.6 best_domain_score:45.6 name:Pribosyltran; db:Pfam-A.hmm|PF14681.6 evalue:1.5e-65 score:219.8 best_domain_score:219.6 name:UPRTase;
sprot_desc Uracil phosphoribosyltransferase;
sprot_id sp|Q1QVR2|UPP_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QVR2|UPP_CHRSD 1 209 evalue:1.2e-93 qcov:100.00 identity:82.30;
tigrfam_acc TIGR01091;
tigrfam_desc uracil phosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name upp;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01091 evalue:7.9e-86 score:286.1 best_domain_score:286.0 name:TIGR01091;
50632 49949 CDS
ID metaerg.pl|08517
allec_ids 3.2.2.27;
allgo_ids GO:0005737; GO:0004844; GO:0006284;
allko_ids K03648; K10800;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_035537670.1 1 227 evalue:4.0e-128 qcov:100.00 identity:94.30;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF03167;
pfam_desc Uracil DNA glycosylase superfamily;
pfam_id UDG;
pfam_target db:Pfam-A.hmm|PF03167.19 evalue:2.3e-23 score:82.1 best_domain_score:81.6 name:UDG;
sprot_desc Uracil-DNA glycosylase;
sprot_id sp|Q8UCM8|UNG_AGRFC;
sprot_target db:uniprot_sprot|sp|Q8UCM8|UNG_AGRFC 5 225 evalue:3.2e-84 qcov:97.40 identity:63.80;
tigrfam_acc TIGR00628;
tigrfam_desc uracil-DNA glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name ung;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00628 evalue:1.7e-81 score:272.2 best_domain_score:272.1 name:TIGR00628;
51114 50635 CDS
ID metaerg.pl|08518
allec_ids 2.4.2.22;
allgo_ids GO:0009116; GO:0005886; GO:0000287; GO:0000310; GO:0006166; GO:0032265;
allko_ids K00769;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_008956229.1 1 159 evalue:5.7e-89 qcov:100.00 identity:99.40;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id SALVPURINE2-PWY;
metacyc_pathway_name xanthine and xanthosine salvage;;
metacyc_pathway_type Purine-Nucleotides-Salvage;;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:2.1e-14 score:52.6 best_domain_score:52.1 name:Pribosyltran;
sprot_desc Xanthine phosphoribosyltransferase;
sprot_id sp|Q1QVR0|XGPT_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QVR0|XGPT_CHRSD 1 158 evalue:8.9e-81 qcov:99.40 identity:85.40;
51666 51121 CDS
ID metaerg.pl|08519
allec_ids 2.4.2.7;
allgo_ids GO:0009116; GO:0005737; GO:0003999; GO:0006168; GO:0044209; GO:0006166;
allko_ids K00759;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035557476.1 1 181 evalue:6.5e-97 qcov:100.00 identity:98.30;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id P121-PWY; SALVADEHYPOX-PWY; P1-PWY;
metacyc_pathway_name adenine and adenosine salvage I;; adenosine nucleotides degradation II;; ;
metacyc_pathway_type Adenine-Adenosine-Salvage;; Adenosine-Nucleotides-Degradation;; ;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:2e-15 score:55.9 best_domain_score:55.2 name:Pribosyltran;
sprot_desc Adenine phosphoribosyltransferase;
sprot_id sp|Q1QVQ9|APT_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QVQ9|APT_CHRSD 1 181 evalue:9.1e-90 qcov:100.00 identity:89.00;
tigrfam_acc TIGR01090;
tigrfam_desc adenine phosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name apt;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01090 evalue:6.1e-64 score:214.3 best_domain_score:214.2 name:TIGR01090;
53001 51703 CDS
ID metaerg.pl|08520
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0015207; GO:0015295; GO:0015853;
allko_ids K06901;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007114415.1 1 431 evalue:2.7e-218 qcov:99.80 identity:95.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF00860;
pfam_desc Permease family;
pfam_id Xan_ur_permease;
pfam_target db:Pfam-A.hmm|PF00860.20 evalue:3.1e-53 score:180.1 best_domain_score:179.8 name:Xan_ur_permease;
sprot_desc Adenine permease AdeP;
sprot_id sp|P31466|ADEP_ECOLI;
sprot_target db:uniprot_sprot|sp|P31466|ADEP_ECOLI 3 432 evalue:5.9e-119 qcov:99.50 identity:52.30;
tm_num 11;
53001 51703 transmembrane_helix
ID metaerg.pl|08521
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology o51760-51828i51847-51915o51991-52059i52108-52176o52219-52272i52276-52332o52390-52458i52657-52716o52726-52794i52828-52896o52939-52995i;
53859 53227 CDS
ID metaerg.pl|08522
allec_ids 2.5.1.9;
allgo_ids GO:0005829; GO:0004746; GO:0009231;
allko_ids K00793;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035579651.1 1 206 evalue:2.0e-97 qcov:98.10 identity:89.30;
kegg_pathway_id 00740;
kegg_pathway_name Riboflavin metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id RIBOSYN2-PWY; PWY-6167; PWY-6168;
metacyc_pathway_name flavin biosynthesis I (bacteria and plants);; flavin biosynthesis II (archaea);; flavin biosynthesis III (fungi);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00677;
pfam_desc Lumazine binding domain;
pfam_id Lum_binding;
pfam_target db:Pfam-A.hmm|PF00677.17 evalue:3e-45 score:151.4 best_domain_score:77.2 name:Lum_binding;
sprot_desc Riboflavin synthase;
sprot_id sp|P0AFU8|RISA_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AFU8|RISA_ECOLI 1 209 evalue:1.2e-64 qcov:99.50 identity:59.00;
tigrfam_acc TIGR00187;
tigrfam_desc riboflavin synthase, alpha subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribE;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00187 evalue:3.4e-72 score:241.0 best_domain_score:240.9 name:TIGR00187;
54170 55213 CDS
ID metaerg.pl|08523
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015424; GO:0015821;
allko_ids K02032; K10017; K02017; K11084; K02052; K02006; K02004; K09972; K01997; K02003; K02056; K02010; K05847; K10821; K02068; K11072; K02045; K02028; K10041; K06021; K10441; K10199; K02071; K06861; K01996; K11076; K10235; K06857; K05816; K02013; K02031; K01998; K10112; K10111; K10562; K02065; K01995; K02049; K11962; K02000; K02029; K02023; K10038; K10025; K02018; K10000; K10243; K01990; K02036; K10010; K09812; K10021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233524.1 1 346 evalue:9.6e-174 qcov:99.70 identity:92.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6135; PWY-6171; PWY-6166; PWY-6188;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF13304; PF00005; PF09383;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; NIL domain;
pfam_id AAA_21; ABC_tran; NIL;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:5.6e-08 score:32.2 best_domain_score:19.4 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.8e-34 score:118.4 best_domain_score:117.8 name:ABC_tran; db:Pfam-A.hmm|PF09383.10 evalue:2.9e-24 score:83.9 best_domain_score:82.7 name:NIL;
sprot_desc Methionine import ATP-binding protein MetN;
sprot_id sp|Q1QVQ7|METN_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QVQ7|METN_CHRSD 1 346 evalue:7.5e-149 qcov:99.70 identity:77.50;
55194 55847 CDS
ID metaerg.pl|08524
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0042626; GO:0048473;
allko_ids K02072;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87570.1 1 217 evalue:4.5e-105 qcov:100.00 identity:95.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.1e-21 score:74.8 best_domain_score:74.8 name:BPD_transp_1;
sprot_desc Probable D-methionine transport system permease protein MetI;
sprot_id sp|Q9KTJ6|METI_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KTJ6|METI_VIBCH 7 217 evalue:3.0e-47 qcov:97.20 identity:51.20;
tm_num 5;
55194 55847 transmembrane_helix
ID metaerg.pl|08525
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i55242-55310o55353-55421i55440-55508o55629-55697i55734-55802o;
55952 56743 CDS
ID metaerg.pl|08526
allgo_ids GO:0005886; GO:0006865;
allko_ids K02073;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_007114419.1 1 263 evalue:9.0e-140 qcov:100.00 identity:96.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF03180;
pfam_desc NLPA lipoprotein;
pfam_id Lipoprotein_9;
pfam_target db:Pfam-A.hmm|PF03180.14 evalue:3.8e-88 score:293.8 best_domain_score:293.6 name:Lipoprotein_9;
sp YES;
sprot_desc Probable D-methionine-binding lipoprotein MetQ;
sprot_id sp|Q9KTJ7|METQ_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KTJ7|METQ_VIBCH 22 261 evalue:2.4e-67 qcov:91.30 identity:51.50;
tigrfam_acc TIGR00363;
tigrfam_desc lipoprotein, YaeC family;
tigrfam_mainrole Cell envelope;
tigrfam_name TIGR00363;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00363 evalue:1.1e-81 score:273.4 best_domain_score:273.3 name:TIGR00363;
55952 56014 signal_peptide
ID metaerg.pl|08527
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
56868 57365 CDS
ID metaerg.pl|08528
allgo_ids GO:0005515; GO:0005829; GO:0070191;
allko_ids K02478; K07704; K08801; K08968;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035579655.1 1 159 evalue:1.2e-78 qcov:96.40 identity:86.80;
kegg_pathway_id 02020; 00271;
kegg_pathway_name Two-component system - General; Methionine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF01590; PF13185;
pfam_desc GAF domain; GAF domain;
pfam_id GAF; GAF_2;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:2.2e-09 score:37.3 best_domain_score:37.0 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:1.3e-09 score:37.7 best_domain_score:37.3 name:GAF_2;
sprot_desc hypothetical protein;
sprot_id sp|O34553|YTSP_BACSU;
sprot_target db:uniprot_sprot|sp|O34553|YTSP_BACSU 6 137 evalue:2.3e-31 qcov:80.00 identity:50.00;
57509 57433 tRNA
ID metaerg.pl|08529
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
name tRNA_Val_gac;
57611 57535 tRNA
ID metaerg.pl|08530
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
name tRNA_Val_gac;
57713 57637 tRNA
ID metaerg.pl|08531
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
name tRNA_Val_gac;
59346 57970 CDS
ID metaerg.pl|08532
allec_ids 4.2.1.2;
allgo_ids GO:0006099; GO:0016829; GO:0045239; GO:0004333; GO:0010106; GO:0006106;
allko_ids K01679; K01744; K01756; K01857;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035557459.1 1 458 evalue:4.4e-235 qcov:100.00 identity:92.60;
kegg_pathway_id 00020; 00230; 00720; 00252; 00910; 00362;
kegg_pathway_name Citrate cycle (TCA cycle); Purine metabolism; Reductive carboxylate cycle (CO2 fixation); Alanine and aspartate metabolism; Nitrogen metabolism; Benzoate degradation via hydroxylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id TCA; P108-PWY; P42-PWY; PWY-5913; PWY-5690; P105-PWY; PWY-6146; ANARESP1-PWY; TCA-GLYOX-BYPASS; PWY-561; PWY-5392; REDCITCYC; GLYCOLYSIS-TCA-GLYOX-BYPASS; P23-PWY; PWY-5464; FERMENTATION-PWY;
metacyc_pathway_name TCA cycle I (prokaryotic);; pyruvate fermentation to propanoate I;; incomplete reductive TCA cycle;; partial TCA cycle (obligate autotrophs);; TCA cycle II (plants and fungi);; TCA cycle IV (2-oxoglutarate decarboxylase);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; ; superpathway of glyoxylate bypass and TCA;; superpathway of glyoxylate cycle and fatty acid degradation;; reductive TCA cycle II;; TCA cycle VIII (Helicobacter);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; reductive TCA cycle I;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; mixed acid fermentation;;
metacyc_pathway_type TCA-VARIANTS;; Pyruvate-Propanoate-Fermentation;; Reductive-TCA-Cycles;; TCA-VARIANTS;; TCA-VARIANTS;; TCA-VARIANTS;; Biosynthesis; Super-Pathways;; ; Super-Pathways; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;;
pfam_acc PF10415; PF00206;
pfam_desc Fumarase C C-terminus; Lyase;
pfam_id FumaraseC_C; Lyase_1;
pfam_target db:Pfam-A.hmm|PF10415.9 evalue:1.3e-17 score:63.1 best_domain_score:61.7 name:FumaraseC_C; db:Pfam-A.hmm|PF00206.20 evalue:7.3e-92 score:307.3 best_domain_score:306.9 name:Lyase_1;
sprot_desc Fumarate hydratase class II 2;
sprot_id sp|Q51404|FUMC2_PSEAE;
sprot_target db:uniprot_sprot|sp|Q51404|FUMC2_PSEAE 3 456 evalue:5.6e-160 qcov:99.10 identity:66.80;
59589 59963 CDS
ID metaerg.pl|08533
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis_A;
genomedb_acc GCF_002211105.1;
genomedb_target db:genomedb|GCF_002211105.1|WP_088699999.1 1 124 evalue:3.5e-54 qcov:100.00 identity:94.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF09361;
pfam_desc Phasin protein;
pfam_id Phasin_2;
pfam_target db:Pfam-A.hmm|PF09361.10 evalue:3.3e-12 score:45.8 best_domain_score:45.8 name:Phasin_2;
60776 60069 CDS
ID metaerg.pl|08534
allgo_ids GO:0006260; GO:0032297;
allko_ids K10763;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF59815.1 1 235 evalue:3.3e-125 qcov:100.00 identity:94.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF00308;
pfam_desc Bacterial dnaA protein;
pfam_id Bac_DnaA;
pfam_target db:Pfam-A.hmm|PF00308.18 evalue:1.4e-22 score:79.9 best_domain_score:61.3 name:Bac_DnaA;
sprot_desc DnaA regulatory inactivator Hda;
sprot_id sp|A1JL00|HDA_YERE8;
sprot_target db:uniprot_sprot|sp|A1JL00|HDA_YERE8 7 233 evalue:1.1e-50 qcov:96.60 identity:45.20;
tigrfam_acc TIGR03420;
tigrfam_desc DnaA regulatory inactivator Hda;
tigrfam_mainrole DNA metabolism;
tigrfam_name DnaA_homol_Hda;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR03420 evalue:1.1e-82 score:276.1 best_domain_score:275.9 name:TIGR03420;
61903 60773 CDS
ID metaerg.pl|08535
allgo_ids GO:0016021; GO:0005886;
allko_ids K03548;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_040481323.1 1 376 evalue:5.7e-172 qcov:100.00 identity:84.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:6.6e-66 score:221.9 best_domain_score:221.7 name:AI-2E_transport;
sprot_desc Putative transport protein RP630;
sprot_id sp|Q9ZCT3|Y630_RICPR;
sprot_target db:uniprot_sprot|sp|Q9ZCT3|Y630_RICPR 5 299 evalue:3.8e-13 qcov:78.50 identity:36.20;
tm_num 7;
61903 60773 transmembrane_helix
ID metaerg.pl|08536
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology o60785-60883i60941-61009o61205-61273i61364-61432o61475-61543i61562-61630o61673-61768i;
62100 63167 CDS
ID metaerg.pl|08537
allec_ids 6.3.3.1;
allgo_ids GO:0005737; GO:0005524; GO:0004641; GO:0006189;
allko_ids K11788; K01933; K11787; K11175; K01945;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233515.1 1 355 evalue:1.6e-192 qcov:100.00 identity:95.80;
kegg_pathway_id 00230; 00670;
kegg_pathway_name Purine metabolism; One carbon pool by folate;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY-6121; DENOVOPURINE2-PWY; PWY-6122; PRPP-PWY; PWY-6277; PWY-841;
metacyc_pathway_name 5-aminoimidazole ribonucleotide biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;;
metacyc_pathway_type AIR-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00586; PF02769;
pfam_desc AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain;
pfam_id AIRS; AIRS_C;
pfam_target db:Pfam-A.hmm|PF00586.24 evalue:7.4e-15 score:54.6 best_domain_score:53.8 name:AIRS; db:Pfam-A.hmm|PF02769.22 evalue:3.5e-39 score:133.7 best_domain_score:133.0 name:AIRS_C;
sprot_desc Phosphoribosylformylglycinamidine cyclo-ligase;
sprot_id sp|Q1QVP5|PUR5_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QVP5|PUR5_CHRSD 1 353 evalue:6.9e-158 qcov:99.40 identity:79.30;
tigrfam_acc TIGR00878;
tigrfam_desc phosphoribosylformylglycinamidine cyclo-ligase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purM;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00878 evalue:2.1e-141 score:470.1 best_domain_score:469.9 name:TIGR00878;
63164 63931 CDS
ID metaerg.pl|08538
allec_ids 2.1.2.2;
allgo_ids GO:0009058; GO:0016742; GO:0005829; GO:0004644; GO:0006189; GO:0006974;
allko_ids K11788; K00601; K11787; K01933; K01945; K11175;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF59812.1 1 254 evalue:1.3e-130 qcov:99.60 identity:93.30;
kegg_pathway_id 00230; 00670;
kegg_pathway_name Purine metabolism; One carbon pool by folate;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY-6277; PWY-841; FOLSYN-PWY; PWY-6121; ALL-CHORISMATE-PWY;
metacyc_pathway_name superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of tetrahydrofolate biosynthesis and salvage;; 5-aminoimidazole ribonucleotide biosynthesis I;; superpathway of chorismate metabolism;;
metacyc_pathway_type AIR-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Folate-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; Super-Pathways;;
pfam_acc PF00551;
pfam_desc Formyl transferase;
pfam_id Formyl_trans_N;
pfam_target db:Pfam-A.hmm|PF00551.19 evalue:7e-58 score:194.6 best_domain_score:194.0 name:Formyl_trans_N;
sprot_desc Phosphoribosylglycinamide formyltransferase;
sprot_id sp|P08179|PUR3_ECOLI;
sprot_target db:uniprot_sprot|sp|P08179|PUR3_ECOLI 24 229 evalue:3.8e-57 qcov:80.80 identity:54.90;
tigrfam_acc TIGR00639;
tigrfam_desc phosphoribosylglycinamide formyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name PurN;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00639 evalue:4.3e-71 score:237.6 best_domain_score:237.2 name:TIGR00639;
64571 64005 CDS
ID metaerg.pl|08539
allec_ids 3.5.4.13;
allgo_ids GO:0008829; GO:0000166; GO:0006226; GO:0006229;
allko_ids K01494;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_040481325.1 1 188 evalue:6.7e-105 qcov:100.00 identity:98.90;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY-6545; PWY0-166;
metacyc_pathway_name pyrimidine deoxyribonucleotides de novo biosynthesis III;; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);;
metacyc_pathway_type Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF00692;
pfam_desc dUTPase;
pfam_id dUTPase;
pfam_target db:Pfam-A.hmm|PF00692.19 evalue:2e-08 score:33.2 best_domain_score:30.0 name:dUTPase;
sprot_desc dCTP deaminase;
sprot_id sp|Q1QVP3|DCD_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QVP3|DCD_CHRSD 1 188 evalue:1.7e-99 qcov:100.00 identity:91.00;
tigrfam_acc TIGR02274;
tigrfam_desc deoxycytidine triphosphate deaminase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name dCTP_deam;
tigrfam_sub1role 2'-Deoxyribonucleotide metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR02274 evalue:2.6e-48 score:163.2 best_domain_score:163.0 name:TIGR02274;
65383 64583 CDS
ID metaerg.pl|08540
allgo_ids GO:0005524; GO:0016491; GO:0055114; GO:0016887; GO:0051536; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233513.1 1 266 evalue:1.7e-138 qcov:100.00 identity:95.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF13614; PF02374; PF01656; PF00142; PF09140; PF10609; PF07015;
pfam_desc AAA domain; Anion-transporting ATPase; CobQ/CobB/MinD/ParA nucleotide binding domain; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; ATPase MipZ; NUBPL iron-transfer P-loop NTPase; VirC1 protein;
pfam_id AAA_31; ArsA_ATPase; CbiA; Fer4_NifH; MipZ; ParA; VirC1;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:8.9e-13 score:47.8 best_domain_score:37.8 name:AAA_31; db:Pfam-A.hmm|PF02374.15 evalue:1.6e-06 score:26.8 best_domain_score:22.7 name:ArsA_ATPase; db:Pfam-A.hmm|PF01656.23 evalue:3.6e-17 score:61.9 best_domain_score:58.9 name:CbiA; db:Pfam-A.hmm|PF00142.18 evalue:6.9e-07 score:28.2 best_domain_score:23.8 name:Fer4_NifH; db:Pfam-A.hmm|PF09140.11 evalue:9.4e-11 score:40.7 best_domain_score:40.3 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:1.3e-102 score:341.6 best_domain_score:341.4 name:ParA; db:Pfam-A.hmm|PF07015.11 evalue:9.3e-05 score:21.1 best_domain_score:19.5 name:VirC1;
sprot_desc Iron-sulfur cluster carrier protein;
sprot_id sp|P72190|APBC_PSEFR;
sprot_target db:uniprot_sprot|sp|P72190|APBC_PSEFR 4 245 evalue:4.3e-88 qcov:91.00 identity:63.20;
66657 65551 CDS
ID metaerg.pl|08541
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF59809.1 1 368 evalue:8.7e-125 qcov:100.00 identity:73.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF08614; PF08317;
pfam_desc Autophagy protein 16 (ATG16); Spc7 kinetochore protein;
pfam_id ATG16; Spc7;
pfam_target db:Pfam-A.hmm|PF08614.11 evalue:2.1e-08 score:33.9 best_domain_score:20.9 name:ATG16; db:Pfam-A.hmm|PF08317.11 evalue:2.1e-09 score:35.9 best_domain_score:22.8 name:Spc7;
tm_num 1;
66657 65551 transmembrane_helix
ID metaerg.pl|08542
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i65629-65682o;
67687 66839 CDS
ID metaerg.pl|08543
allec_ids 2.1.1.107; 1.3.1.76; 4.99.1.4;
allgo_ids GO:0008168; GO:0051287; GO:0043115; GO:0051266; GO:0004851; GO:0009236; GO:0019354;
allko_ids K02302;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ86818.1 1 275 evalue:3.4e-121 qcov:97.50 identity:81.50;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id P381-PWY; PWY-5194; PWY-5196;
metacyc_pathway_name adenosylcobalamin biosynthesis II (aerobic);; siroheme biosynthesis;; factor 430 biosynthesis;;
metacyc_pathway_type De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;; Porphyrin-Compounds-Biosynthesis;; Cofactor-Biosynthesis;;
pfam_acc PF00590;
pfam_desc Tetrapyrrole (Corrin/Porphyrin) Methylases;
pfam_id TP_methylase;
pfam_target db:Pfam-A.hmm|PF00590.20 evalue:3e-51 score:173.6 best_domain_score:173.3 name:TP_methylase;
sprot_desc Siroheme synthase;
sprot_id sp|Q820Q4|CYSG_NITEU;
sprot_target db:uniprot_sprot|sp|Q820Q4|CYSG_NITEU 17 264 evalue:1.7e-82 qcov:87.90 identity:60.50;
tigrfam_acc TIGR01469;
tigrfam_desc uroporphyrinogen-III C-methyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cobA_cysG_Cterm;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01469 evalue:2.2e-93 score:311.5 best_domain_score:311.3 name:TIGR01469;
67931 68833 CDS
ID metaerg.pl|08544
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233511.1 1 300 evalue:1.2e-145 qcov:100.00 identity:83.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF00990;
pfam_desc Diguanylate cyclase, GGDEF domain;
pfam_id GGDEF;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:1.7e-44 score:150.6 best_domain_score:150.2 name:GGDEF;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:4e-45 score:152.7 best_domain_score:152.3 name:TIGR00254;
68863 69201 CDS
ID metaerg.pl|08545
allec_ids 4.2.1.96;
allgo_ids GO:0006729; GO:0008124;
allko_ids K01724;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693427.1 1 112 evalue:6.5e-47 qcov:100.00 identity:79.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PHENYLALANINE-DEG1-PWY;
metacyc_pathway_name L-phenylalanine degradation I (aerobic);;
metacyc_pathway_type PHENYLALANINE-DEG;;
pfam_acc PF01329;
pfam_desc Pterin 4 alpha carbinolamine dehydratase;
pfam_id Pterin_4a;
pfam_target db:Pfam-A.hmm|PF01329.19 evalue:1.1e-28 score:98.5 best_domain_score:98.3 name:Pterin_4a;
sprot_desc Putative pterin-4-alpha-carbinolamine dehydratase;
sprot_id sp|Q1QXY2|PHS_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QXY2|PHS_CHRSD 1 111 evalue:9.8e-34 qcov:99.10 identity:59.50;
69202 70392 CDS
ID metaerg.pl|08546
allec_ids 2.6.1.57;
allgo_ids GO:0009058; GO:0030170; GO:0005829; GO:0042802; GO:0004069; GO:0080130; GO:0004838; GO:0033585; GO:0006572;
allko_ids K00813; K00825; K00832;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI67460.1 1 396 evalue:4.5e-228 qcov:100.00 identity:97.50;
kegg_pathway_id 00350; 00300; 00360; 00330; 00252; 00251; 00400; 00401; 00272; 00310; 00710; 00271;
kegg_pathway_name Tyrosine metabolism; Lysine biosynthesis; Phenylalanine metabolism; Arginine and proline metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Novobiocin biosynthesis; Cysteine metabolism; Lysine degradation; Carbon fixation in photosynthetic organisms; Methionine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id TYRSYN; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY; PWY-5079; PHESYN; PWY3O-4108; BENZCOA-PWY;
metacyc_pathway_name L-tyrosine biosynthesis I;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;; L-phenylalanine degradation III;; L-phenylalanine biosynthesis I;; L-tyrosine degradation III;; anaerobic aromatic compound degradation (Thauera aromatica);;
metacyc_pathway_type TYROSINE-SYN;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; PHENYLALANINE-DEG;; PHENYLALANINE-SYN;; TYROSINE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:3.3e-81 score:272.5 best_domain_score:272.3 name:Aminotran_1_2;
sprot_desc Aromatic-amino-acid aminotransferase;
sprot_id sp|P43336|PHHC_PSEAE;
sprot_target db:uniprot_sprot|sp|P43336|PHHC_PSEAE 2 394 evalue:3.6e-139 qcov:99.20 identity:59.50;
71819 70479 CDS
ID metaerg.pl|08547
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085; GO:0016021; GO:0042910;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_083570973.1 1 444 evalue:4.6e-229 qcov:99.60 identity:92.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF01554; PF14667;
pfam_desc MatE; Polysaccharide biosynthesis C-terminal domain;
pfam_id MatE; Polysacc_synt_C;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:5.1e-39 score:132.7 best_domain_score:85.3 name:MatE; db:Pfam-A.hmm|PF14667.6 evalue:5.2e-08 score:32.3 best_domain_score:32.3 name:Polysacc_synt_C;
sprot_desc FAD transporter;
sprot_id sp|Q8EIX5|BFE_SHEON;
sprot_target db:uniprot_sprot|sp|Q8EIX5|BFE_SHEON 10 432 evalue:6.4e-52 qcov:94.80 identity:34.40;
tigrfam_acc TIGR00797;
tigrfam_desc MATE efflux family protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name matE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00797 evalue:9.3e-47 score:158.9 best_domain_score:158.6 name:TIGR00797;
tm_num 12;
71819 70479 transmembrane_helix
ID metaerg.pl|08548
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i70527-70595o70638-70706i70740-70808o70866-70925i70962-71030o71043-71096i71196-71264o71307-71375i71433-71501o71544-71612i71631-71684o71697-71765i;
72513 71914 CDS
ID metaerg.pl|08549
allgo_ids GO:0042597;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002966495;
genomedb_acc GCF_002966495.1;
genomedb_target db:genomedb|GCF_002966495.1|WP_009096234.1 9 199 evalue:9.6e-94 qcov:96.00 identity:90.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF04264;
pfam_desc YceI-like domain;
pfam_id YceI;
pfam_target db:Pfam-A.hmm|PF04264.13 evalue:9.1e-36 score:122.8 best_domain_score:122.5 name:YceI;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|C1DI88|Y325_AZOVD;
sprot_target db:uniprot_sprot|sp|C1DI88|Y325_AZOVD 9 199 evalue:3.3e-48 qcov:96.00 identity:49.70;
71914 72000 signal_peptide
ID metaerg.pl|08550
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
73308 72733 CDS
ID metaerg.pl|08551
allgo_ids GO:0009055; GO:0016021; GO:0005886; GO:0046872; GO:0022904;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693431.1 1 189 evalue:9.9e-88 qcov:99.00 identity:80.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF01292;
pfam_desc Prokaryotic cytochrome b561;
pfam_id Ni_hydr_CYTB;
pfam_target db:Pfam-A.hmm|PF01292.20 evalue:6.9e-28 score:96.7 best_domain_score:96.5 name:Ni_hydr_CYTB;
sprot_desc Cytochrome b561 homolog 2;
sprot_id sp|P75925|C56I_ECOLI;
sprot_target db:uniprot_sprot|sp|P75925|C56I_ECOLI 4 182 evalue:6.1e-44 qcov:93.70 identity:44.80;
tm_num 4;
73308 72733 transmembrane_helix
ID metaerg.pl|08552
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i72766-72834o72877-72936i72997-73065o73153-73212i;
74777 73578 CDS
ID metaerg.pl|08553
allec_ids 2.5.1.-; 4.2.99.-;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0016846; GO:0016765; GO:0071266; GO:0071268; GO:0009086; GO:0019346;
allko_ids K10764; K01740;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ86812.1 1 399 evalue:2.2e-214 qcov:100.00 identity:95.20;
kegg_pathway_id 00272; 00271;
kegg_pathway_name Cysteine metabolism; Methionine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY-5783; PWY-5805; POLYISOPRENSYN-PWY; PWY-6262; PWY-724; PWY-5861; PWY-6263; PWY-5808; PWY-5897; PWY-5132; PWY-5862; PWY-5845; PWY-5896; PWY-2681; PWY-5068; PWY-5898; PWY-6406; PWY-5863; PWY-5816; PWY-5135; PWY-6404; PWY-5806; PWY-5701; PWY-5140; PWY-6520; PWY-5134; PWY-4502; PWY-5064; PWY-5838; PWY-5899; PWY-6403; PWY-5817; PWY-6129; PWY-5864; PWY-5133; PWY-5027; PWY-5893; PWY-6383;
metacyc_pathway_name octaprenyl diphosphate biosynthesis;; nonaprenyl diphosphate biosynthesis I;; polyisoprenoid biosynthesis (E. coli);; demethylmenaquinol-8 biosynthesis II;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-8 biosynthesis II;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; lupulone and humulone biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; trans-zeatin biosynthesis;; chlorophyll cycle;; superpathway of menaquinol-12 biosynthesis;; salicylate biosynthesis I;; superpathway of phylloquinol biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; xanthohumol biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; shikonin biosynthesis;; cannabinoid biosynthesis;; nonaprenyl diphosphate biosynthesis II;; superpathway of bitter acids biosynthesis;; wighteone and luteone biosynthesis;; chlorophyll a biosynthesis II;; superpathway of menaquinol-8 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; carrageenan biosynthesis;; dodecaprenyl diphosphate biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; superpathway of plastoquinol biosynthesis;; colupulone and cohumulone biosynthesis;; phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;;
metacyc_pathway_type Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; CYTOKININ-BIOSYNTHESIS;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Salicylate-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; PRENYLFLAVONOID-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; QUINONE-SYN;; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Polysaccharides-Biosynthesis;; Polyprenyl-Biosynthesis;; Lipid-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;;
pfam_acc PF00155; PF00266; PF01053; PF01041;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Cys/Met metabolism PLP-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; Aminotran_5; Cys_Met_Meta_PP; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1.4e-12 score:46.7 best_domain_score:46.3 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:1.1e-08 score:33.6 best_domain_score:32.8 name:Aminotran_5; db:Pfam-A.hmm|PF01053.20 evalue:2e-134 score:447.2 best_domain_score:447.0 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF01041.17 evalue:2.6e-11 score:42.7 best_domain_score:41.1 name:DegT_DnrJ_EryC1;
sprot_desc O-succinylhomoserine sulfhydrylase;
sprot_id sp|P55218|METZ_PSEAE;
sprot_target db:uniprot_sprot|sp|P55218|METZ_PSEAE 4 396 evalue:1.9e-140 qcov:98.50 identity:62.60;
tigrfam_acc TIGR01325;
tigrfam_desc O-succinylhomoserine sulfhydrylase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name O_suc_HS_sulf;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01325 evalue:1.1e-169 score:563.2 best_domain_score:563.0 name:TIGR01325;
76310 74790 CDS
ID metaerg.pl|08554
allec_ids 2.4.2.14;
allgo_ids GO:0009116; GO:0004044; GO:0000287; GO:0006189; GO:0006541; GO:0009113;
allko_ids K00764; K00762;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233503.1 1 506 evalue:4.3e-292 qcov:100.00 identity:99.00;
kegg_pathway_id 00230; 00240; 00251; 00983;
kegg_pathway_name Purine metabolism; Pyrimidine metabolism; Glutamate metabolism; Drug metabolism - other enzymes;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY-841; PWY-6277; PRPP-PWY; PWY-6122; DENOVOPURINE2-PWY; PWY-6121;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis I;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;; 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis I;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;; Super-Pathways;; AIR-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;;
pfam_acc PF13230; PF13522; PF13537; PF00156;
pfam_desc Glutamine amidotransferases class-II; Glutamine amidotransferase domain; Glutamine amidotransferase domain; Phosphoribosyl transferase domain;
pfam_id GATase_4; GATase_6; GATase_7; Pribosyltran;
pfam_target db:Pfam-A.hmm|PF13230.6 evalue:3.1e-05 score:22.2 best_domain_score:21.6 name:GATase_4; db:Pfam-A.hmm|PF13522.6 evalue:3.9e-17 score:61.9 best_domain_score:60.8 name:GATase_6; db:Pfam-A.hmm|PF13537.6 evalue:5e-16 score:58.0 best_domain_score:56.8 name:GATase_7; db:Pfam-A.hmm|PF00156.27 evalue:5.8e-07 score:28.4 best_domain_score:27.4 name:Pribosyltran;
sprot_desc Amidophosphoribosyltransferase;
sprot_id sp|Q51342|PUR1_PSEAE;
sprot_target db:uniprot_sprot|sp|Q51342|PUR1_PSEAE 1 499 evalue:1.8e-196 qcov:98.60 identity:67.60;
tigrfam_acc TIGR01134;
tigrfam_desc amidophosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purF;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01134 evalue:3.6e-156 score:520.0 best_domain_score:519.8 name:TIGR01134;
76974 76399 CDS
ID metaerg.pl|08555
allgo_ids GO:0009403; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233502.1 1 191 evalue:3.7e-87 qcov:100.00 identity:94.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF02674;
pfam_desc Colicin V production protein;
pfam_id Colicin_V;
pfam_target db:Pfam-A.hmm|PF02674.16 evalue:7.9e-34 score:115.9 best_domain_score:115.7 name:Colicin_V;
tm_num 4;
76974 76399 transmembrane_helix
ID metaerg.pl|08556
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology o76408-76467i76486-76539o76597-76665i76702-76770o;
77691 76978 CDS
ID metaerg.pl|08557
allgo_ids GO:0042834;
allko_ids K01448;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007114443.1 1 237 evalue:1.6e-79 qcov:100.00 identity:69.70;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF05036;
pfam_desc Sporulation related domain;
pfam_id SPOR;
pfam_target db:Pfam-A.hmm|PF05036.13 evalue:4.1e-15 score:55.2 best_domain_score:54.4 name:SPOR;
sp YES;
tm_num 1;
76978 77061 signal_peptide
ID metaerg.pl|08558
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
77691 76978 transmembrane_helix
ID metaerg.pl|08559
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i77002-77061o;
79036 77678 CDS
ID metaerg.pl|08560
allec_ids 6.3.2.12; 6.3.2.-;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0008841; GO:0046872; GO:0004326; GO:0046656; GO:0006730; GO:0046654;
allko_ids K11754;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233500.1 1 452 evalue:1.2e-211 qcov:100.00 identity:79.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id ALL-CHORISMATE-PWY; 1CMET2-PWY; FOLSYN-PWY; PWY-6455; PWY-6548; PWY-3841;
metacyc_pathway_name superpathway of chorismate metabolism;; N10-formyl-tetrahydrofolate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; vancomycin resistance II;; ; folate transformations II;;
metacyc_pathway_type Super-Pathways;; Folate-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Cell-Wall-Biosynthesis; Vancomycin-Resistnace;; ; Folate-Transformations;;
pfam_acc PF08245;
pfam_desc Mur ligase middle domain;
pfam_id Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF08245.12 evalue:9.3e-10 score:38.0 best_domain_score:36.8 name:Mur_ligase_M;
sprot_desc Dihydrofolate synthase/folylpolyglutamate synthase;
sprot_id sp|P08192|FOLC_ECOLI;
sprot_target db:uniprot_sprot|sp|P08192|FOLC_ECOLI 20 433 evalue:1.3e-84 qcov:91.60 identity:43.60;
tigrfam_acc TIGR01499;
tigrfam_desc bifunctional protein FolC;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name folC;
tigrfam_sub1role Folic acid;
tigrfam_target db:TIGRFAMs.hmm|TIGR01499 evalue:3.6e-87 score:292.5 best_domain_score:292.2 name:TIGR01499;
80048 79029 CDS
ID metaerg.pl|08561
allec_ids 2.1.3.15; 6.4.1.2;
allgo_ids GO:0009317; GO:0003989; GO:0005524; GO:0016743; GO:0008270; GO:0006633; GO:2001295;
allko_ids K01963;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF59794.1 1 339 evalue:7.2e-174 qcov:100.00 identity:92.30;
kegg_pathway_id 00620; 00253; 00640; 00061;
kegg_pathway_name Pyruvate metabolism; Tetracycline biosynthesis; Propanoate metabolism; Fatty acid biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id PWY-5743; PWY0-1264; PWY-5156; PWY-5789; PWY-4381; PWY0-881; PWY-6285; PWY-6113; FASYN-INITIAL-PWY;
metacyc_pathway_name 3-hydroxypropanoate cycle;; biotin-carboxyl carrier protein assembly;; superpathway of fatty acid biosynthesis II (plant);; 3-hydroxypropanoate/4-hydroxybutanate cycle;; fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);;
metacyc_pathway_type Autotrophic-CO2-Fixation;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF01039; PF17848;
pfam_desc Carboxyl transferase domain; Acetyl-coA carboxylase zinc finger domain;
pfam_id Carboxyl_trans; zf-ACC;
pfam_target db:Pfam-A.hmm|PF01039.22 evalue:7e-19 score:67.0 best_domain_score:66.5 name:Carboxyl_trans; db:Pfam-A.hmm|PF17848.1 evalue:2.6e-10 score:39.4 best_domain_score:38.7 name:zf-ACC;
sprot_desc Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta;
sprot_id sp|Q1QY40|ACCD_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QY40|ACCD_CHRSD 1 311 evalue:1.6e-143 qcov:91.70 identity:83.70;
tigrfam_acc TIGR00515;
tigrfam_desc acetyl-CoA carboxylase, carboxyl transferase, beta subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accD;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00515 evalue:8.1e-130 score:431.4 best_domain_score:431.2 name:TIGR00515;
80946 80143 CDS
ID metaerg.pl|08562
allec_ids 4.2.1.20;
allgo_ids GO:0004834; GO:0006568;
allko_ids K01695; K01696; K01694; K06001; K01817;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis_A;
genomedb_acc GCF_002211105.1;
genomedb_target db:genomedb|GCF_002211105.1|WP_088699980.1 1 267 evalue:3.9e-143 qcov:100.00 identity:97.80;
kegg_pathway_id 02020; 00400;
kegg_pathway_name Two-component system - General; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id TRPSYN-PWY; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00290;
pfam_desc Tryptophan synthase alpha chain;
pfam_id Trp_syntA;
pfam_target db:Pfam-A.hmm|PF00290.20 evalue:1.2e-92 score:308.7 best_domain_score:308.5 name:Trp_syntA;
sprot_desc Tryptophan synthase alpha chain;
sprot_id sp|Q1QY41|TRPA_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QY41|TRPA_CHRSD 1 266 evalue:3.8e-108 qcov:99.60 identity:73.30;
tigrfam_acc TIGR00262;
tigrfam_desc tryptophan synthase, alpha subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpA;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00262 evalue:7.5e-80 score:266.6 best_domain_score:266.5 name:TIGR00262;
82211 80970 CDS
ID metaerg.pl|08563
allec_ids 4.2.1.20;
allgo_ids GO:0004834;
allko_ids K01817; K06001; K01694; K01754; K01696; K01695;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_035579706.1 1 413 evalue:2.1e-236 qcov:100.00 identity:98.80;
kegg_pathway_id 00260; 00400; 00290; 02020;
kegg_pathway_name Glycine, serine and threonine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Valine, leucine and isoleucine biosynthesis; Two-component system - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY; TRPSYN-PWY;
metacyc_pathway_name superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;; L-tryptophan biosynthesis;;
metacyc_pathway_type Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; TRYPTOPHAN-BIOSYNTHESIS;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:3.2e-46 score:157.3 best_domain_score:157.1 name:PALP;
sprot_desc Tryptophan synthase beta chain;
sprot_id sp|Q6FEF1|TRPB_ACIAD;
sprot_target db:uniprot_sprot|sp|Q6FEF1|TRPB_ACIAD 15 412 evalue:1.0e-173 qcov:96.40 identity:73.60;
tigrfam_acc TIGR00263;
tigrfam_desc tryptophan synthase, beta subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpB;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00263 evalue:2.5e-181 score:602.0 best_domain_score:601.9 name:TIGR00263;
82941 82303 CDS
ID metaerg.pl|08564
allec_ids 5.3.1.24;
allgo_ids GO:0004640; GO:0006568; GO:0000162;
allko_ids K13498; K01817; K01609;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF59791.1 1 212 evalue:1.5e-105 qcov:100.00 identity:89.20;
kegg_pathway_id 00400; 02020;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Two-component system - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id TRPSYN-PWY; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00697;
pfam_desc N-(5'phosphoribosyl)anthranilate (PRA) isomerase;
pfam_id PRAI;
pfam_target db:Pfam-A.hmm|PF00697.22 evalue:1.6e-46 score:157.8 best_domain_score:157.6 name:PRAI;
sprot_desc N-(5'-phosphoribosyl)anthranilate isomerase;
sprot_id sp|Q1QY43|TRPF_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QY43|TRPF_CHRSD 5 211 evalue:2.4e-73 qcov:97.60 identity:62.30;
83876 82938 CDS
ID metaerg.pl|08565
allec_ids 5.4.99.12;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0106029; GO:0031119;
allko_ids K06173;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007114449.1 1 312 evalue:7.3e-173 qcov:100.00 identity:93.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
pfam_acc PF01416;
pfam_desc tRNA pseudouridine synthase;
pfam_id PseudoU_synth_1;
pfam_target db:Pfam-A.hmm|PF01416.20 evalue:5.1e-36 score:122.7 best_domain_score:87.8 name:PseudoU_synth_1;
sprot_desc tRNA pseudouridine synthase A;
sprot_id sp|B7LLF2|TRUA_ESCF3;
sprot_target db:uniprot_sprot|sp|B7LLF2|TRUA_ESCF3 8 274 evalue:2.5e-79 qcov:85.60 identity:52.80;
tigrfam_acc TIGR00071;
tigrfam_desc tRNA pseudouridine(38-40) synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name hisT_truA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00071 evalue:4e-64 score:215.6 best_domain_score:215.3 name:TIGR00071;
85571 83886 CDS
ID metaerg.pl|08566
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ86802.1 1 560 evalue:2.9e-135 qcov:99.80 identity:44.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
sp YES;
tigrfam_acc TIGR03505;
tigrfam_desc FimV N-terminal domain;
tigrfam_name FimV_core;
tigrfam_target db:TIGRFAMs.hmm|TIGR03505 evalue:1.5e-20 score:72.0 best_domain_score:72.0 name:TIGR03505;
tm_num 1;
83886 83951 signal_peptide
ID metaerg.pl|08567
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
85571 83886 transmembrane_helix
ID metaerg.pl|08568
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
topology i83904-83972o;
86846 85734 CDS
ID metaerg.pl|08569
allec_ids 1.2.1.11;
allgo_ids GO:0016620; GO:0051287; GO:0055114; GO:0004073; GO:0050661; GO:0046983; GO:0071266; GO:0019877; GO:0009097; GO:0009089; GO:0009088;
allko_ids K00133;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007114451.1 1 370 evalue:2.7e-211 qcov:100.00 identity:98.10;
kegg_pathway_id 00300; 00260;
kegg_pathway_name Lysine biosynthesis; Glycine, serine and threonine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id METSYN-PWY; HOMOSERSYN-PWY; PWY-724; THRESYN-PWY; PWY-6565; PWY-5097; PWY-6562; PWY0-781; P101-PWY; PWY-3001; PWY-5345; P4-PWY; PWY-5347; PWY-6559; PWY-2941; DAPLYSINESYN-PWY; MET-SAM-PWY;
metacyc_pathway_name superpathway of L-homoserine and L-methionine biosynthesis;; L-homoserine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of L-threonine biosynthesis;; superpathway of polyamine biosynthesis III;; L-lysine biosynthesis VI;; norspermidine biosynthesis;; aspartate superpathway;; ectoine biosynthesis;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-methionine biosynthesis (by sulfhydrylation);; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-methionine biosynthesis (transsulfuration);; spermidine biosynthesis II;; L-lysine biosynthesis II;; L-lysine biosynthesis I;; superpathway of S-adenosyl-L-methionine biosynthesis;;
metacyc_pathway_type Methionine-De-novo-Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways; THREONINE-BIOSYNTHESIS;; Polyamine-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Polyamine-Biosynthesis;; Super-Pathways;; Polyamine-Biosynthesis;; ISOLEUCINE-SYN; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Spermidine-Biosynthesis;; LYSINE-SYN;; LYSINE-SYN;; Super-Pathways;;
pfam_acc PF01118; PF02774;
pfam_desc Semialdehyde dehydrogenase, NAD binding domain; Semialdehyde dehydrogenase, dimerisation domain;
pfam_id Semialdhyde_dh; Semialdhyde_dhC;
pfam_target db:Pfam-A.hmm|PF01118.24 evalue:3.7e-23 score:81.5 best_domain_score:80.7 name:Semialdhyde_dh; db:Pfam-A.hmm|PF02774.18 evalue:2.9e-55 score:186.4 best_domain_score:186.1 name:Semialdhyde_dhC;
sprot_desc Aspartate-semialdehyde dehydrogenase;
sprot_id sp|Q51344|DHAS_PSEAE;
sprot_target db:uniprot_sprot|sp|Q51344|DHAS_PSEAE 1 370 evalue:1.4e-150 qcov:100.00 identity:68.10;
tigrfam_acc TIGR01745;
tigrfam_desc aspartate-semialdehyde dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name asd_gamma;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01745 evalue:1.4e-189 score:628.8 best_domain_score:628.6 name:TIGR01745;
88147 87068 CDS
ID metaerg.pl|08570
allec_ids 1.1.1.85;
allgo_ids GO:0016616; GO:0055114; GO:0005737; GO:0003862; GO:0000287; GO:0051287; GO:0009098;
allko_ids K10978; K00052;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035579719.1 1 359 evalue:1.2e-195 qcov:100.00 identity:98.90;
kegg_pathway_id 00290;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 21.3061; 0.00873576; 21.3148; ;
metacyc_pathway_id BRANCHED-CHAIN-AA-SYN-PWY; LEUSYN-PWY;
metacyc_pathway_name superpathway of branched chain amino acid biosynthesis;; L-leucine biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; LEUCINE-SYN;;
pfam_acc PF00180;
pfam_desc Isocitrate/isopropylmalate dehydrogenase;
pfam_id Iso_dh;
pfam_target db:Pfam-A.hmm|PF00180.20 evalue:9.3e-134 score:445.2 best_domain_score:445.0 name:Iso_dh;
sprot_desc 3-isopropylmalate dehydrogenase;
sprot_id sp|Q1QUR0|LEU3_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QUR0|LEU3_CHRSD 1 359 evalue:2.0e-165 qcov:100.00 identity:81.60;
tigrfam_acc TIGR00169;
tigrfam_desc 3-isopropylmalate dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name leuB;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00169 evalue:1.1e-149 score:497.3 best_domain_score:497.1 name:TIGR00169;
>Feature NODE_59_length_88058_cov_63.5162
3 332 CDS
ID metaerg.pl|08571
allec_ids 6.1.1.1;
allgo_ids GO:0003723; GO:0005737; GO:0005524; GO:0004831; GO:0006437;
allko_ids K01866;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583747.1 1 108 evalue:1.1e-48 qcov:99.10 identity:92.60;
kegg_pathway_id 00400; 00970;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF01479;
pfam_desc S4 domain;
pfam_id S4;
pfam_target db:Pfam-A.hmm|PF01479.25 evalue:2.8e-09 score:35.8 best_domain_score:35.2 name:S4;
sprot_desc Tyrosine--tRNA ligase 2;
sprot_id sp|Q834C7|SYY2_ENTFA;
sprot_target db:uniprot_sprot|sp|Q834C7|SYY2_ENTFA 1 106 evalue:4.1e-29 qcov:97.20 identity:61.70;
1109 2680 CDS
ID metaerg.pl|08572
allgo_ids GO:0016020; GO:0022857; GO:0071705; GO:0016021; GO:0005886; GO:0044667; GO:1900751; GO:0009437;
allko_ids K05245;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583750.1 1 523 evalue:2.2e-278 qcov:100.00 identity:96.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF02028;
pfam_desc BCCT, betaine/carnitine/choline family transporter;
pfam_id BCCT;
pfam_target db:Pfam-A.hmm|PF02028.17 evalue:7.4e-119 score:396.6 best_domain_score:396.4 name:BCCT;
sprot_desc L-carnitine/gamma-butyrobetaine antiporter;
sprot_id sp|Q5PIN5|CAIT_SALPA;
sprot_target db:uniprot_sprot|sp|Q5PIN5|CAIT_SALPA 45 509 evalue:8.3e-51 qcov:88.90 identity:29.70;
tm_num 12;
1109 2680 transmembrane_helix
ID metaerg.pl|08573
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology i1169-1231o1274-1342i1403-1471o1562-1630i1715-1783o1826-1894i1931-1999o2099-2152i2189-2257o2369-2437i2495-2554o2564-2632i;
2713 2916 CDS
ID metaerg.pl|08574
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583751.1 1 67 evalue:3.6e-29 qcov:100.00 identity:94.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
4075 3473 CDS
ID metaerg.pl|08575
allgo_ids GO:0005622; GO:0019843; GO:0015935; GO:0003735; GO:0006412;
allko_ids K02986;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583753.1 1 200 evalue:1.4e-108 qcov:100.00 identity:99.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF00163; PF01479;
pfam_desc Ribosomal protein S4/S9 N-terminal domain; S4 domain;
pfam_id Ribosomal_S4; S4;
pfam_target db:Pfam-A.hmm|PF00163.19 evalue:8.5e-29 score:99.5 best_domain_score:99.1 name:Ribosomal_S4; db:Pfam-A.hmm|PF01479.25 evalue:8.6e-21 score:72.6 best_domain_score:71.9 name:S4;
sprot_desc 30S ribosomal protein S4;
sprot_id sp|Q65G42|RS4_BACLD;
sprot_target db:uniprot_sprot|sp|Q65G42|RS4_BACLD 1 200 evalue:1.7e-89 qcov:100.00 identity:81.50;
tigrfam_acc TIGR01017;
tigrfam_desc ribosomal protein uS4;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpsD_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01017 evalue:1e-83 score:279.2 best_domain_score:279.0 name:TIGR01017;
4901 4422 CDS
ID metaerg.pl|08576
allgo_ids GO:0005515; GO:0005829; GO:0070191;
allko_ids K08801; K08968;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583754.1 1 159 evalue:4.7e-83 qcov:100.00 identity:94.30;
kegg_pathway_id 00271;
kegg_pathway_name Methionine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF01590; PF13185;
pfam_desc GAF domain; GAF domain;
pfam_id GAF; GAF_2;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:1e-10 score:41.6 best_domain_score:41.5 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:2.3e-10 score:40.1 best_domain_score:39.9 name:GAF_2;
sprot_desc hypothetical protein;
sprot_id sp|O34553|YTSP_BACSU;
sprot_target db:uniprot_sprot|sp|O34553|YTSP_BACSU 1 159 evalue:1.1e-46 qcov:100.00 identity:59.00;
5768 4950 CDS
ID metaerg.pl|08577
allec_ids 3.1.3.15;
allgo_ids GO:0003824; GO:0004401; GO:0000105;
allko_ids K04486;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583755.1 1 272 evalue:3.8e-141 qcov:100.00 identity:88.60;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id HISTSYN-PWY; PRPP-PWY;
metacyc_pathway_name L-histidine biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type HISTIDINE-SYN;; Super-Pathways;;
pfam_acc PF02811; PF13263;
pfam_desc PHP domain; PHP-associated;
pfam_id PHP; PHP_C;
pfam_target db:Pfam-A.hmm|PF02811.19 evalue:5e-12 score:45.7 best_domain_score:44.9 name:PHP; db:Pfam-A.hmm|PF13263.6 evalue:7.1e-06 score:24.9 best_domain_score:22.9 name:PHP_C;
sprot_desc Histidinol-phosphatase;
sprot_id sp|Q9K801|HIS9_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K801|HIS9_BACHD 3 263 evalue:3.6e-74 qcov:96.00 identity:50.20;
tigrfam_acc TIGR01856;
tigrfam_desc histidinol phosphate phosphatase, HisJ family;
tigrfam_name hisJ_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01856 evalue:1.5e-71 score:240.2 best_domain_score:240.0 name:TIGR01856;
6110 6313 CDS
ID metaerg.pl|08578
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
6422 8110 CDS
ID metaerg.pl|08579
allgo_ids GO:0000921; GO:0005940; GO:0016021; GO:0005886; GO:0000917;
allko_ids K06286;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583756.1 1 562 evalue:1.1e-296 qcov:100.00 identity:98.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF06160;
pfam_desc Septation ring formation regulator, EzrA;
pfam_id EzrA;
pfam_target db:Pfam-A.hmm|PF06160.12 evalue:8.4e-129 score:429.5 best_domain_score:429.2 name:EzrA;
sp YES;
sprot_desc Septation ring formation regulator EzrA;
sprot_id sp|C5D695|EZRA_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D695|EZRA_GEOSW 8 558 evalue:5.6e-61 qcov:98.00 identity:29.60;
tm_num 1;
6422 6487 signal_peptide
ID metaerg.pl|08580
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
6422 8110 transmembrane_helix
ID metaerg.pl|08581
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology i6425-6484o;
8291 9439 CDS
ID metaerg.pl|08582
allec_ids 2.8.1.7;
allgo_ids GO:0006520; GO:0016829; GO:0031071; GO:0051536; GO:0046872;
allko_ids K00825; K04487; K11717;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583757.1 1 382 evalue:5.6e-191 qcov:100.00 identity:89.00;
kegg_pathway_id 00730; 00300; 00310;
kegg_pathway_name Thiamine metabolism; Lysine biosynthesis; Lysine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id PWY0-1021; PWY0-1061;
metacyc_pathway_name L-alanine biosynthesis III;; superpathway of L-alanine biosynthesis;;
metacyc_pathway_type ALANINE-SYN;; ALANINE-SYN; Super-Pathways;;
pfam_acc PF00266; PF01212;
pfam_desc Aminotransferase class-V; Beta-eliminating lyase;
pfam_id Aminotran_5; Beta_elim_lyase;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:1.9e-80 score:269.8 best_domain_score:269.5 name:Aminotran_5; db:Pfam-A.hmm|PF01212.21 evalue:4.5e-05 score:22.1 best_domain_score:20.7 name:Beta_elim_lyase;
sprot_desc Putative cysteine desulfurase IscS 2;
sprot_id sp|O34874|ISCS2_BACSU;
sprot_target db:uniprot_sprot|sp|O34874|ISCS2_BACSU 1 365 evalue:1.3e-93 qcov:95.50 identity:49.20;
9429 10634 CDS
ID metaerg.pl|08583
allec_ids 2.8.1.4;
allgo_ids GO:0004810; GO:0005737; GO:0005524; GO:0016783; GO:0000049; GO:0009228; GO:0009229; GO:0034227;
allko_ids K03151;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583758.1 1 401 evalue:1.8e-216 qcov:100.00 identity:96.30;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF06508; PF02568; PF02926;
pfam_desc Queuosine biosynthesis protein QueC; Thiamine biosynthesis protein (ThiI); THUMP domain;
pfam_id QueC; ThiI; THUMP;
pfam_target db:Pfam-A.hmm|PF06508.13 evalue:1.7e-07 score:30.2 best_domain_score:18.9 name:QueC; db:Pfam-A.hmm|PF02568.14 evalue:9.2e-64 score:213.9 best_domain_score:213.4 name:ThiI; db:Pfam-A.hmm|PF02926.17 evalue:6.1e-21 score:74.3 best_domain_score:73.2 name:THUMP;
sprot_desc Probable tRNA sulfurtransferase;
sprot_id sp|C1KVN9|THII_LISMC;
sprot_target db:uniprot_sprot|sp|C1KVN9|THII_LISMC 1 387 evalue:1.5e-121 qcov:96.50 identity:55.00;
tigrfam_acc TIGR00342;
tigrfam_desc tRNA sulfurtransferase ThiI;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00342;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00342 evalue:2.3e-118 score:394.7 best_domain_score:394.5 name:TIGR00342;
10896 12482 CDS
ID metaerg.pl|08584
allec_ids 3.5.-.-;
allgo_ids GO:0016787; GO:0016810;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583759.1 1 528 evalue:1.8e-288 qcov:100.00 identity:92.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:4e-13 score:48.6 best_domain_score:40.4 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:4.8e-112 score:375.1 best_domain_score:374.9 name:Amidohydro_3;
sprot_desc Putative amidohydrolase YtcJ;
sprot_id sp|O34355|YTCJ_BACSU;
sprot_target db:uniprot_sprot|sp|O34355|YTCJ_BACSU 1 525 evalue:4.8e-139 qcov:99.40 identity:46.70;
13332 12526 CDS
ID metaerg.pl|08585
allec_ids 2.7.1.23;
allgo_ids GO:0003951; GO:0006741; GO:0005737; GO:0005524; GO:0046872; GO:0019674;
allko_ids K00858;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583760.1 1 268 evalue:5.3e-148 qcov:100.00 identity:99.60;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id NADPHOS-DEPHOS-PWY; PWY-5083;
metacyc_pathway_name NAD phosphorylation and dephosphorylation;; NAD/NADH phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; NAD-Metabolism;;
pfam_acc PF01513;
pfam_desc ATP-NAD kinase;
pfam_id NAD_kinase;
pfam_target db:Pfam-A.hmm|PF01513.21 evalue:1.4e-20 score:72.9 best_domain_score:71.9 name:NAD_kinase;
sprot_desc NAD kinase 2;
sprot_id sp|Q65G58|NADK2_BACLD;
sprot_target db:uniprot_sprot|sp|Q65G58|NADK2_BACLD 1 267 evalue:2.0e-85 qcov:99.60 identity:56.00;
13449 14435 CDS
ID metaerg.pl|08586
allec_ids 3.4.21.-; 3.4.-.-;
allgo_ids GO:0006508; GO:0008233; GO:0016021; GO:0005886; GO:0008236;
allko_ids K04773;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583761.1 1 328 evalue:5.5e-179 qcov:100.00 identity:98.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF00574; PF01343;
pfam_desc Clp protease; Peptidase family S49;
pfam_id CLP_protease; Peptidase_S49;
pfam_target db:Pfam-A.hmm|PF00574.23 evalue:8.9e-06 score:24.9 best_domain_score:18.5 name:CLP_protease; db:Pfam-A.hmm|PF01343.18 evalue:8.1e-48 score:161.5 best_domain_score:161.0 name:Peptidase_S49;
sp YES;
sprot_desc Putative signal peptide peptidase SppA;
sprot_id sp|Q9K809|SPPA_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K809|SPPA_BACHD 1 328 evalue:2.7e-76 qcov:100.00 identity:47.70;
tigrfam_acc TIGR00706;
tigrfam_desc signal peptide peptidase SppA, 36K type;
tigrfam_mainrole Protein fate;
tigrfam_name SppA_dom;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00706 evalue:6.4e-70 score:234.1 best_domain_score:233.8 name:TIGR00706;
tm_num 1;
13449 13529 signal_peptide
ID metaerg.pl|08587
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
13449 14435 transmembrane_helix
ID metaerg.pl|08588
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology i13467-13535o;
14447 15004 CDS
ID metaerg.pl|08589
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583762.1 1 185 evalue:7.8e-90 qcov:100.00 identity:95.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF06271;
pfam_desc RDD family;
pfam_id RDD;
pfam_target db:Pfam-A.hmm|PF06271.12 evalue:5.1e-21 score:74.6 best_domain_score:74.3 name:RDD;
sprot_desc Uncharacterized membrane protein YteJ;
sprot_id sp|O34424|YTEJ_BACSU;
sprot_target db:uniprot_sprot|sp|O34424|YTEJ_BACSU 9 162 evalue:8.9e-24 qcov:83.20 identity:39.70;
tm_num 2;
14447 15004 transmembrane_helix
ID metaerg.pl|08590
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology i14543-14611o14639-14707i;
15057 15554 CDS
ID metaerg.pl|08591
allec_ids 1.11.1.15;
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005623; GO:0008379; GO:0045454;
allko_ids K03386; K11065;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583763.1 1 165 evalue:2.0e-81 qcov:100.00 identity:94.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:2.5e-18 score:65.4 best_domain_score:65.1 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:7.7e-24 score:83.3 best_domain_score:82.9 name:Redoxin;
sprot_desc Thiol peroxidase;
sprot_id sp|Q9K813|TPX_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K813|TPX_BACHD 1 165 evalue:3.2e-57 qcov:100.00 identity:64.80;
15821 16807 CDS
ID metaerg.pl|08592
allgo_ids GO:0003677; GO:0006306; GO:0008170;
allko_ids K00571;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583764.1 1 328 evalue:5.1e-177 qcov:100.00 identity:97.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF02384;
pfam_desc N-6 DNA Methylase;
pfam_id N6_Mtase;
pfam_target db:Pfam-A.hmm|PF02384.16 evalue:1.5e-15 score:56.5 best_domain_score:56.0 name:N6_Mtase;
sprot_desc hypothetical protein;
sprot_id sp|P37876|YTXK_BACSU;
sprot_target db:uniprot_sprot|sp|P37876|YTXK_BACSU 11 324 evalue:1.5e-58 qcov:95.70 identity:39.30;
17002 18192 CDS
ID metaerg.pl|08593
allec_ids 2.7.2.1;
allgo_ids GO:0005622; GO:0016301; GO:0016310; GO:0016774; GO:0005737; GO:0008776; GO:0005524; GO:0000287; GO:0006085; GO:0006082;
allko_ids K00925;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583765.1 1 396 evalue:1.7e-219 qcov:100.00 identity:99.00;
kegg_pathway_id 00620; 00430; 00640;
kegg_pathway_name Pyruvate metabolism; Taurine and hypotaurine metabolism; Propanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id METH-ACETATE-PWY; P461-PWY; PROPFERM-PWY; FERMENTATION-PWY; P164-PWY; PWY-5482; P441-PWY; ACETATEUTIL-PWY; PWY-5497; PWY-5600; P142-PWY; PWY-5100; PWY-5676; PWY-5485; P41-PWY; P161-PWY; PWY-5327; P3-PWY; P124-PWY; PWY0-1312;
metacyc_pathway_name methanogenesis from acetate;; hexitol fermentation to lactate, formate, ethanol and acetate;; L-alanine fermentation to propanoate and acetate;; mixed acid fermentation;; purine nucleobases degradation I (anaerobic);; pyruvate fermentation to acetate II;; superpathway of N-acetylneuraminate degradation;; superpathway of acetate utilization and formation;; purine nucleobases degradation II (anaerobic);; pyruvate fermentation to acetate VII;; pyruvate fermentation to acetate I;; pyruvate fermentation to acetate and lactate II;; acetyl-CoA fermentation to butanoate II;; pyruvate fermentation to acetate IV;; pyruvate fermentation to acetate and (S)-lactate I;; acetylene degradation (anaerobic);; superpathway of L-lysine degradation;; gallate degradation III (anaerobic);; Bifidobacterium shunt;; acetate and ATP formation from acetyl-CoA I;;
metacyc_pathway_type METHANOGENESIS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Fermentation; Purine-Degradation;; Pyruvate-Acetate-Fermentation;; CARBOXYLATES-DEG; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; Fermentation; Purine-Degradation;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Acetyl-CoA-Butyrate; Super-Pathways;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Acetate-Formation; Pyruvate-Ethanol-Fermentation;; LYSINE-DEG; Super-Pathways;; GALLATE-DEG;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Acetate-Formation;;
pfam_acc PF00871;
pfam_desc Acetokinase family;
pfam_id Acetate_kinase;
pfam_target db:Pfam-A.hmm|PF00871.17 evalue:5.7e-172 score:571.0 best_domain_score:570.8 name:Acetate_kinase;
sprot_desc Acetate kinase;
sprot_id sp|Q9K815|ACKA_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K815|ACKA_BACHD 5 393 evalue:1.6e-184 qcov:98.20 identity:81.20;
tigrfam_acc TIGR00016;
tigrfam_desc acetate kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name ackA;
tigrfam_sub1role Fermentation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00016 evalue:5.4e-178 score:591.0 best_domain_score:590.8 name:TIGR00016;
19264 18794 CDS
ID metaerg.pl|08594
allgo_ids GO:0005737;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583766.1 1 156 evalue:1.3e-77 qcov:100.00 identity:98.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:7.4e-37 score:126.2 best_domain_score:126.1 name:Usp;
sprot_desc Putative universal stress protein SA1532;
sprot_id sp|Q7A551|Y1532_STAAN;
sprot_target db:uniprot_sprot|sp|Q7A551|Y1532_STAAN 3 146 evalue:9.4e-35 qcov:92.30 identity:51.40;
19458 20219 CDS
ID metaerg.pl|08595
allec_ids 1.-.-.-;
allgo_ids GO:0016616; GO:0030497; GO:0055114;
allko_ids K00059;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583767.1 1 253 evalue:1.2e-136 qcov:100.00 identity:96.80;
kegg_pathway_id 01040; 00061;
kegg_pathway_name Biosynthesis of unsaturated fatty acids; Fatty acid biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987; PWY-2821; PWY-5826; PWY-4302; PWY-5271;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;;
pfam_acc PF00106; PF13561; PF08659; PF13460;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain; NAD(P)H-binding;
pfam_id adh_short; adh_short_C2; KR; NAD_binding_10;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:3.2e-39 score:133.6 best_domain_score:133.2 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:3.2e-46 score:157.0 best_domain_score:156.8 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:3.3e-07 score:29.6 best_domain_score:29.0 name:KR; db:Pfam-A.hmm|PF13460.6 evalue:2.5e-07 score:30.0 best_domain_score:29.0 name:NAD_binding_10;
sprot_desc Putative oxidoreductase YtkK;
sprot_id sp|O34308|YTKK_BACSU;
sprot_target db:uniprot_sprot|sp|O34308|YTKK_BACSU 1 253 evalue:1.5e-90 qcov:100.00 identity:62.20;
21448 20348 CDS
ID metaerg.pl|08596
allec_ids 3.4.13.-;
allgo_ids GO:0016787; GO:0016805; GO:0046872; GO:0008237;
allko_ids K01271;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583768.1 1 366 evalue:1.3e-197 qcov:100.00 identity:94.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF01321; PF00557;
pfam_desc Creatinase/Prolidase N-terminal domain; Metallopeptidase family M24;
pfam_id Creatinase_N; Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF01321.18 evalue:1.1e-22 score:80.4 best_domain_score:79.3 name:Creatinase_N; db:Pfam-A.hmm|PF00557.24 evalue:4.4e-64 score:215.3 best_domain_score:215.0 name:Peptidase_M24;
sprot_desc Putative dipeptidase YkvY;
sprot_id sp|O31689|YKVY_BACSU;
sprot_target db:uniprot_sprot|sp|O31689|YKVY_BACSU 1 362 evalue:3.7e-106 qcov:98.90 identity:51.20;
21567 22250 CDS
ID metaerg.pl|08597
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583769.1 1 227 evalue:8.9e-128 qcov:100.00 identity:99.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF00753; PF12706; PF13483;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2; Lactamase_B_3;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:5.5e-10 score:38.8 best_domain_score:37.3 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:3.2e-22 score:78.3 best_domain_score:77.8 name:Lactamase_B_2; db:Pfam-A.hmm|PF13483.6 evalue:5.3e-26 score:90.7 best_domain_score:90.3 name:Lactamase_B_3;
sprot_desc hypothetical protein;
sprot_id sp|A0RJK8|Y4194_BACAH;
sprot_target db:uniprot_sprot|sp|A0RJK8|Y4194_BACAH 1 227 evalue:2.3e-98 qcov:100.00 identity:73.10;
22976 22293 CDS
ID metaerg.pl|08598
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583770.1 1 227 evalue:4.0e-120 qcov:100.00 identity:95.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
sp YES;
22293 22352 lipoprotein_signal_peptide
ID metaerg.pl|08599
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
23222 24529 CDS
ID metaerg.pl|08600
allgo_ids GO:0003700; GO:0006355;
allko_ids K00088; K00641; K05847; K02806; K00974; K00970; K00825; K01697; K02000;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583771.1 1 435 evalue:8.2e-239 qcov:100.00 identity:99.80;
kegg_pathway_id 00983; 00310; 00271; 00920; 00230; 00260; 02010; 02060; 00450; 00300;
kegg_pathway_name Drug metabolism - other enzymes; Lysine degradation; Methionine metabolism; Sulfur metabolism; Purine metabolism; Glycine, serine and threonine metabolism; ABC transporters - General; Phosphotransferase system (PTS); Selenoamino acid metabolism; Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF03061; PF00571; PF07085; PF00392; PF08279; PF13384;
pfam_desc Thioesterase superfamily; CBS domain; DRTGG domain; Bacterial regulatory proteins, gntR family; HTH domain; Homeodomain-like domain;
pfam_id 4HBT; CBS; DRTGG; GntR; HTH_11; HTH_23;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:2.6e-08 score:33.4 best_domain_score:32.4 name:4HBT; db:Pfam-A.hmm|PF00571.28 evalue:1e-16 score:60.4 best_domain_score:36.9 name:CBS; db:Pfam-A.hmm|PF07085.12 evalue:6.1e-31 score:105.6 best_domain_score:103.8 name:DRTGG; db:Pfam-A.hmm|PF00392.21 evalue:1.5e-06 score:27.0 best_domain_score:24.8 name:GntR; db:Pfam-A.hmm|PF08279.12 evalue:6.2e-06 score:25.3 best_domain_score:23.9 name:HTH_11; db:Pfam-A.hmm|PF13384.6 evalue:7e-06 score:24.9 best_domain_score:23.0 name:HTH_23;
sprot_desc hypothetical protein;
sprot_id sp|O34921|YTOI_BACSU;
sprot_target db:uniprot_sprot|sp|O34921|YTOI_BACSU 2 435 evalue:5.1e-155 qcov:99.80 identity:63.50;
24711 24947 CDS
ID metaerg.pl|08601
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
25061 26008 CDS
ID metaerg.pl|08602
allec_ids 3.1.-.-;
allgo_ids GO:0003676; GO:0008441; GO:0004527;
allko_ids K06881;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583839.1 6 315 evalue:1.0e-161 qcov:98.40 identity:93.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01368; PF02272;
pfam_desc DHH family; DHHA1 domain;
pfam_id DHH; DHHA1;
pfam_target db:Pfam-A.hmm|PF01368.20 evalue:2.2e-13 score:49.5 best_domain_score:48.5 name:DHH; db:Pfam-A.hmm|PF02272.19 evalue:2.1e-11 score:43.7 best_domain_score:42.8 name:DHHA1;
sprot_desc Bifunctional oligoribonuclease and PAP phosphatase NrnA;
sprot_id sp|O34600|NRNA_BACSU;
sprot_target db:uniprot_sprot|sp|O34600|NRNA_BACSU 11 312 evalue:2.1e-78 qcov:95.90 identity:47.50;
26270 29602 CDS
ID metaerg.pl|08603
allec_ids 2.7.7.7;
allgo_ids GO:0006260; GO:0008408; GO:0005737; GO:0003887; GO:0003676;
allko_ids K14162; K02323; K02337; K03763;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583773.1 1 1110 evalue:0.0e+00 qcov:100.00 identity:95.00;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF07733; PF17657; PF14579; PF02811; PF01336;
pfam_desc Bacterial DNA polymerase III alpha NTPase domain; Bacterial DNA polymerase III alpha subunit finger domain; Helix-hairpin-helix motif; PHP domain; OB-fold nucleic acid binding domain;
pfam_id DNA_pol3_alpha; DNA_pol3_finger; HHH_6; PHP; tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF07733.12 evalue:2.6e-99 score:331.2 best_domain_score:330.1 name:DNA_pol3_alpha; db:Pfam-A.hmm|PF17657.1 evalue:5.8e-60 score:200.6 best_domain_score:199.6 name:DNA_pol3_finger; db:Pfam-A.hmm|PF14579.6 evalue:1.3e-19 score:69.5 best_domain_score:66.9 name:HHH_6; db:Pfam-A.hmm|PF02811.19 evalue:1.3e-24 score:86.6 best_domain_score:85.4 name:PHP; db:Pfam-A.hmm|PF01336.25 evalue:4.7e-08 score:32.1 best_domain_score:29.6 name:tRNA_anti-codon;
sprot_desc DNA polymerase III subunit alpha;
sprot_id sp|Q9K838|DPO3A_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K838|DPO3A_BACHD 1 1103 evalue:8.3e-234 qcov:99.40 identity:41.60;
tigrfam_acc TIGR00594;
tigrfam_desc DNA polymerase III, alpha subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name polc;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00594 evalue:0 score:1030.8 best_domain_score:1030.2 name:TIGR00594;
29690 30931 CDS
ID metaerg.pl|08604
allec_ids 1.1.1.38;
allgo_ids GO:0006520; GO:0016491; GO:0055114; GO:0004471; GO:0046872; GO:0051287; GO:0008948;
allko_ids K00029; K00625; K00027;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583840.1 11 413 evalue:1.3e-222 qcov:97.60 identity:99.80;
kegg_pathway_id 00710; 00620; 00640; 00430;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Pyruvate metabolism; Propanoate metabolism; Taurine and hypotaurine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id GLUCONEO-PWY;
metacyc_pathway_name gluconeogenesis I;;
metacyc_pathway_type Gluconeogenesis;;
pfam_acc PF00208; PF00390; PF03949;
pfam_desc Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Malic enzyme, N-terminal domain; Malic enzyme, NAD binding domain;
pfam_id ELFV_dehydrog; malic; Malic_M;
pfam_target db:Pfam-A.hmm|PF00208.21 evalue:1.8e-05 score:23.8 best_domain_score:23.8 name:ELFV_dehydrog; db:Pfam-A.hmm|PF00390.19 evalue:9.3e-34 score:116.0 best_domain_score:108.4 name:malic; db:Pfam-A.hmm|PF03949.15 evalue:1.3e-25 score:89.4 best_domain_score:84.4 name:Malic_M;
sprot_desc Probable NAD-dependent malic enzyme 4;
sprot_id sp|O34962|MAO4_BACSU;
sprot_target db:uniprot_sprot|sp|O34962|MAO4_BACSU 3 409 evalue:6.3e-179 qcov:98.50 identity:78.10;
31073 31735 CDS
ID metaerg.pl|08605
allgo_ids GO:0003700; GO:0006355; GO:0003677;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583774.1 1 220 evalue:2.7e-113 qcov:100.00 identity:97.30;
kegg_pathway_id 00300; 00310;
kegg_pathway_name Lysine biosynthesis; Lysine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:1.1e-24 score:86.5 best_domain_score:86.5 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:1.5e-21 score:75.1 best_domain_score:74.1 name:GntR;
sprot_desc Uncharacterized HTH-type transcriptional regulator YcbG;
sprot_id sp|P42239|YCBG_BACSU;
sprot_target db:uniprot_sprot|sp|P42239|YCBG_BACSU 10 215 evalue:1.3e-10 qcov:93.60 identity:26.20;
31830 32687 CDS
ID metaerg.pl|08606
allec_ids 2.1.3.15; 6.4.1.2;
allgo_ids GO:0009317; GO:0003989; GO:0005524; GO:0016743; GO:0008270; GO:0006633; GO:2001295;
allko_ids K01963;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583775.1 1 285 evalue:9.7e-156 qcov:100.00 identity:98.60;
kegg_pathway_id 00253; 00061; 00640; 00620;
kegg_pathway_name Tetracycline biosynthesis; Fatty acid biosynthesis; Propanoate metabolism; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id FASYN-INITIAL-PWY; PWY-6113; PWY-6285; PWY0-881; PWY-4381; PWY-5789; PWY-5156; PWY0-1264; PWY-5743;
metacyc_pathway_name superpathway of fatty acid biosynthesis initiation (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; superpathway of fatty acid biosynthesis I (E. coli);; fatty acid biosynthesis initiation I;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; superpathway of fatty acid biosynthesis II (plant);; biotin-carboxyl carrier protein assembly;; 3-hydroxypropanoate cycle;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Autotrophic-CO2-Fixation;; Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; Autotrophic-CO2-Fixation;;
pfam_acc PF01039;
pfam_desc Carboxyl transferase domain;
pfam_id Carboxyl_trans;
pfam_target db:Pfam-A.hmm|PF01039.22 evalue:2.1e-19 score:68.8 best_domain_score:68.3 name:Carboxyl_trans;
sprot_desc Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta;
sprot_id sp|B7GGS9|ACCD_ANOFW;
sprot_target db:uniprot_sprot|sp|B7GGS9|ACCD_ANOFW 1 285 evalue:6.4e-106 qcov:100.00 identity:66.70;
tigrfam_acc TIGR00515;
tigrfam_desc acetyl-CoA carboxylase, carboxyl transferase, beta subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accD;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00515 evalue:2.6e-125 score:416.7 best_domain_score:416.5 name:TIGR00515;
32691 33668 CDS
ID metaerg.pl|08607
allec_ids 2.1.3.15; 6.4.1.2;
allgo_ids GO:0003989; GO:0006633; GO:0009317; GO:0005524; GO:0016743; GO:2001295;
allko_ids K01962;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583776.1 1 325 evalue:1.7e-180 qcov:100.00 identity:98.20;
kegg_pathway_id 00640; 00061; 00253; 00620;
kegg_pathway_name Propanoate metabolism; Fatty acid biosynthesis; Tetracycline biosynthesis; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id PWY-5743; PWY-5789; PWY0-1264; PWY-5156; PWY0-881; PWY-4381; FASYN-INITIAL-PWY; PWY-6113; PWY-6285;
metacyc_pathway_name 3-hydroxypropanoate cycle;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; biotin-carboxyl carrier protein assembly;; superpathway of fatty acid biosynthesis II (plant);; superpathway of fatty acid biosynthesis I (E. coli);; fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis initiation (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);;
metacyc_pathway_type Autotrophic-CO2-Fixation;; Autotrophic-CO2-Fixation;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF03255; PF01039; PF06833;
pfam_desc Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; Carboxyl transferase domain; Malonate decarboxylase gamma subunit (MdcE);
pfam_id ACCA; Carboxyl_trans; MdcE;
pfam_target db:Pfam-A.hmm|PF03255.14 evalue:1.6e-65 score:218.6 best_domain_score:216.9 name:ACCA; db:Pfam-A.hmm|PF01039.22 evalue:2.7e-14 score:51.9 best_domain_score:51.7 name:Carboxyl_trans; db:Pfam-A.hmm|PF06833.11 evalue:1.3e-05 score:24.1 best_domain_score:23.9 name:MdcE;
sprot_desc Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha;
sprot_id sp|Q9K842|ACCA_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K842|ACCA_BACHD 1 321 evalue:4.4e-135 qcov:98.80 identity:73.20;
tigrfam_acc TIGR00513;
tigrfam_desc acetyl-CoA carboxylase, carboxyl transferase, alpha subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accA;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00513 evalue:6.6e-150 score:498.0 best_domain_score:497.8 name:TIGR00513;
33800 34759 CDS
ID metaerg.pl|08608
allec_ids 2.7.1.11;
allgo_ids GO:0003872; GO:0006096; GO:0005737; GO:0005524; GO:0046872; GO:0006002;
allko_ids K00850; K00895;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583777.1 1 319 evalue:2.5e-176 qcov:100.00 identity:99.10;
kegg_pathway_id 00052; 00010; 00051; 00030;
kegg_pathway_name Galactose metabolism; Glycolysis / Gluconeogenesis; Fructose and mannose metabolism; Pentose phosphate pathway;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id P441-PWY; ANAEROFRUCAT-PWY; PWY-1042; PWY-3801; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5464; ANAGLYCOLYSIS-PWY; PWY-1861; PWY-5484; GLYCOLYSIS-E-D; P461-PWY; GLYCOLYSIS;
metacyc_pathway_name superpathway of N-acetylneuraminate degradation;; homolactic fermentation;; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; formaldehyde assimilation II (assimilatory RuMP Cycle);; glycolysis II (from fructose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis I (from glucose 6-phosphate);;
metacyc_pathway_type CARBOXYLATES-DEG; Super-Pathways;; Fermentation-to-Lactate; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Formaldehyde-Assimilation;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;;
pfam_acc PF00365;
pfam_desc Phosphofructokinase;
pfam_id PFK;
pfam_target db:Pfam-A.hmm|PF00365.20 evalue:2e-114 score:380.9 best_domain_score:380.7 name:PFK;
sprot_desc ATP-dependent 6-phosphofructokinase;
sprot_id sp|Q5WEF6|PFKA_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WEF6|PFKA_BACSK 1 319 evalue:7.1e-146 qcov:100.00 identity:78.70;
tigrfam_acc TIGR02482;
tigrfam_desc 6-phosphofructokinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name PFKA_ATP;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR02482 evalue:7.4e-139 score:461.0 best_domain_score:460.8 name:TIGR02482;
34851 36605 CDS
ID metaerg.pl|08609
allec_ids 2.7.1.40;
allgo_ids GO:0016310; GO:0016772; GO:0005524; GO:0016301; GO:0000287; GO:0030955; GO:0004743;
allko_ids K02821; K02812; K12406; K00873; K08483; K08484; K02794; K02793; K01007; K02744;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583778.1 1 584 evalue:7.8e-311 qcov:100.00 identity:97.30;
kegg_pathway_id 00230; 02060; 00720; 00620; 00710; 00010;
kegg_pathway_name Purine metabolism; Phosphotransferase system (PTS); Reductive carboxylate cycle (CO2 fixation); Pyruvate metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id PWY-6146; GLYCOLYSIS-E-D; P122-PWY; GLYCOLYSIS; ANARESP1-PWY; PWY-2221; P124-PWY; NPGLUCAT-PWY; PWY-5484; P461-PWY; PWY-6142; P341-PWY; FERMENTATION-PWY; P441-PWY; PWY-5723; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAGLYCOLYSIS-PWY; PWY-5464;
metacyc_pathway_name Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of glycolysis and the Entner-Doudoroff pathway;; heterolactic fermentation;; glycolysis I (from glucose 6-phosphate);; ; Entner-Doudoroff pathway III (semi-phosphorylative);; Bifidobacterium shunt;; Entner-Doudoroff pathway II (non-phosphorylative);; glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; glycolysis V (Pyrococcus);; mixed acid fermentation;; superpathway of N-acetylneuraminate degradation;; Rubisco shunt;; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; GLYCOLYSIS-VARIANTS;; ; Entner-Duodoroff-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Entner-Duodoroff-Pathways;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Gluconeogenesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; CARBOXYLATES-DEG; Super-Pathways;; Energy-Metabolism;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00391; PF00224; PF02887;
pfam_desc PEP-utilising enzyme, mobile domain; Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain;
pfam_id PEP-utilizers; PK; PK_C;
pfam_target db:Pfam-A.hmm|PF00391.23 evalue:2.2e-24 score:84.2 best_domain_score:83.8 name:PEP-utilizers; db:Pfam-A.hmm|PF00224.21 evalue:5.1e-158 score:524.7 best_domain_score:523.8 name:PK; db:Pfam-A.hmm|PF02887.16 evalue:3.1e-36 score:123.4 best_domain_score:121.8 name:PK_C;
sprot_desc Pyruvate kinase;
sprot_id sp|Q02499|KPYK_GEOSE;
sprot_target db:uniprot_sprot|sp|Q02499|KPYK_GEOSE 2 584 evalue:3.8e-222 qcov:99.80 identity:69.20;
tigrfam_acc TIGR01064;
tigrfam_desc pyruvate kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name pyruv_kin;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01064 evalue:1.1e-191 score:636.6 best_domain_score:636.2 name:TIGR01064;
36789 37199 CDS
ID metaerg.pl|08610
allgo_ids GO:0016020; GO:0016021; GO:0005886;
allko_ids K07113;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583779.1 1 136 evalue:1.9e-61 qcov:100.00 identity:98.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF04186;
pfam_desc FxsA cytoplasmic membrane protein;
pfam_id FxsA;
pfam_target db:Pfam-A.hmm|PF04186.13 evalue:6.8e-35 score:118.7 best_domain_score:118.5 name:FxsA;
sprot_desc hypothetical protein;
sprot_id sp|O32064|YTZA_BACSU;
sprot_target db:uniprot_sprot|sp|O32064|YTZA_BACSU 3 112 evalue:7.7e-17 qcov:80.90 identity:46.40;
tm_num 3;
36789 37199 transmembrane_helix
ID metaerg.pl|08611
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology i36801-36860o36870-36929i37023-37091o;
37880 38350 CDS
ID metaerg.pl|08612
allgo_ids GO:0005887; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583780.1 1 156 evalue:8.1e-72 qcov:100.00 identity:98.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF04284;
pfam_desc Protein of unknown function (DUF441);
pfam_id DUF441;
pfam_target db:Pfam-A.hmm|PF04284.13 evalue:7.2e-43 score:145.2 best_domain_score:144.9 name:DUF441;
sprot_desc hypothetical protein;
sprot_id sp|O34811|YTWI_BACSU;
sprot_target db:uniprot_sprot|sp|O34811|YTWI_BACSU 3 152 evalue:2.9e-44 qcov:96.20 identity:69.30;
tm_num 4;
37880 38350 transmembrane_helix
ID metaerg.pl|08613
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology i37916-37984o38027-38095i38129-38197o38240-38308i;
38621 39736 CDS
ID metaerg.pl|08614
allec_ids 2.3.3.16;
allgo_ids GO:0046912; GO:0005737; GO:0004108; GO:0005975; GO:0006099;
allko_ids K01647;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583781.1 1 371 evalue:1.6e-206 qcov:100.00 identity:99.50;
kegg_pathway_id 00020; 00630;
kegg_pathway_name Citrate cycle (TCA cycle); Glyoxylate and dicarboxylate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF00285;
pfam_desc Citrate synthase, C-terminal domain;
pfam_id Citrate_synt;
pfam_target db:Pfam-A.hmm|PF00285.21 evalue:1.2e-133 score:444.9 best_domain_score:444.7 name:Citrate_synt;
sprot_desc Citrate synthase 2;
sprot_id sp|P39120|CISY2_BACSU;
sprot_target db:uniprot_sprot|sp|P39120|CISY2_BACSU 1 371 evalue:1.4e-153 qcov:100.00 identity:70.40;
tigrfam_acc TIGR01800;
tigrfam_desc 2-methylcitrate synthase/citrate synthase II;
tigrfam_name cit_synth_II;
tigrfam_target db:TIGRFAMs.hmm|TIGR01800 evalue:2e-165 score:549.2 best_domain_score:549.0 name:TIGR01800;
39839 41107 CDS
ID metaerg.pl|08615
allec_ids 1.1.1.42;
allgo_ids GO:0016616; GO:0055114; GO:0004450; GO:0000287; GO:0051287; GO:0006097; GO:0006099;
allko_ids K00031; K10978;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583782.1 1 422 evalue:5.7e-245 qcov:100.00 identity:99.80;
kegg_pathway_id 00020; 00720; 00480;
kegg_pathway_name Citrate cycle (TCA cycle); Reductive carboxylate cycle (CO2 fixation); Glutathione metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5913; REDCITCYC; TCA; TCA-GLYOX-BYPASS; ANARESP1-PWY; FERMENTATION-PWY; P105-PWY; PWY-6549;
metacyc_pathway_name superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; partial TCA cycle (obligate autotrophs);; TCA cycle VIII (Helicobacter);; TCA cycle I (prokaryotic);; superpathway of glyoxylate bypass and TCA;; ; mixed acid fermentation;; TCA cycle IV (2-oxoglutarate decarboxylase);; L-glutamine biosynthesis III;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; TCA-VARIANTS;; TCA-VARIANTS;; TCA-VARIANTS;; Super-Pathways; TCA-VARIANTS;; ; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; TCA-VARIANTS;; GLUTAMINE-SYN;;
pfam_acc PF00180;
pfam_desc Isocitrate/isopropylmalate dehydrogenase;
pfam_id Iso_dh;
pfam_target db:Pfam-A.hmm|PF00180.20 evalue:5.2e-123 score:409.8 best_domain_score:409.5 name:Iso_dh;
sprot_desc Isocitrate dehydrogenase [NADP];
sprot_id sp|P39126|IDH_BACSU;
sprot_target db:uniprot_sprot|sp|P39126|IDH_BACSU 3 421 evalue:4.0e-205 qcov:99.30 identity:80.20;
tigrfam_acc TIGR00183;
tigrfam_desc isocitrate dehydrogenase, NADP-dependent;
tigrfam_mainrole Energy metabolism;
tigrfam_name prok_nadp_idh;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR00183 evalue:7.8e-218 score:722.4 best_domain_score:722.3 name:TIGR00183;
41152 42090 CDS
ID metaerg.pl|08616
allec_ids 1.1.1.37;
allgo_ids GO:0016616; GO:0055114; GO:0030060; GO:0005975; GO:0019752; GO:0006099;
allko_ids K00024; K00026; K00025; K00016;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583783.1 1 312 evalue:3.5e-167 qcov:100.00 identity:97.80;
kegg_pathway_id 00720; 00010; 00710; 00272; 00020; 00620; 00630; 00640;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Cysteine metabolism; Citrate cycle (TCA cycle); Pyruvate metabolism; Glyoxylate and dicarboxylate metabolism; Propanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id FERMENTATION-PWY; GLYOXYLATE-BYPASS; PWY-561; PWY-5392; PWY-1622; MALATE-ASPARTATE-SHUTTLE-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; P23-PWY; PWY-5464; PWY-5690; P105-PWY; PWY-6146; ANARESP1-PWY; TCA-GLYOX-BYPASS; TCA; GLUCONEO-PWY; P108-PWY; P42-PWY; PWY-5913;
metacyc_pathway_name mixed acid fermentation;; glyoxylate cycle;; superpathway of glyoxylate cycle and fatty acid degradation;; reductive TCA cycle II;; formaldehyde assimilation I (serine pathway);; L-aspartate degradation II;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; reductive TCA cycle I;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; TCA cycle II (plants and fungi);; TCA cycle IV (2-oxoglutarate decarboxylase);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; ; superpathway of glyoxylate bypass and TCA;; TCA cycle I (prokaryotic);; gluconeogenesis I;; pyruvate fermentation to propanoate I;; incomplete reductive TCA cycle;; partial TCA cycle (obligate autotrophs);;
metacyc_pathway_type Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Formaldehyde-Assimilation;; ASPARTATE-DEG;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; TCA-VARIANTS;; TCA-VARIANTS;; Biosynthesis; Super-Pathways;; ; Super-Pathways; TCA-VARIANTS;; TCA-VARIANTS;; Gluconeogenesis;; Pyruvate-Propanoate-Fermentation;; Reductive-TCA-Cycles;; TCA-VARIANTS;;
pfam_acc PF02866; PF00056; PF03721;
pfam_desc lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain;
pfam_id Ldh_1_C; Ldh_1_N; UDPG_MGDP_dh_N;
pfam_target db:Pfam-A.hmm|PF02866.18 evalue:2.6e-31 score:108.0 best_domain_score:107.3 name:Ldh_1_C; db:Pfam-A.hmm|PF00056.23 evalue:1.7e-41 score:140.8 best_domain_score:140.3 name:Ldh_1_N; db:Pfam-A.hmm|PF03721.14 evalue:2.1e-06 score:26.7 best_domain_score:25.4 name:UDPG_MGDP_dh_N;
sp YES;
sprot_desc Malate dehydrogenase;
sprot_id sp|Q5WEG2|MDH_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WEG2|MDH_BACSK 3 312 evalue:5.3e-138 qcov:99.40 identity:78.40;
tigrfam_acc TIGR01763;
tigrfam_desc malate dehydrogenase, NAD-dependent;
tigrfam_mainrole Energy metabolism;
tigrfam_name MalateDH_bact;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01763 evalue:1.6e-156 score:519.3 best_domain_score:519.1 name:TIGR01763;
41152 41226 signal_peptide
ID metaerg.pl|08617
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
42179 42658 CDS
ID metaerg.pl|08618
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583784.1 1 159 evalue:2.0e-81 qcov:100.00 identity:93.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF01575; PF13452;
pfam_desc MaoC like domain; N-terminal half of MaoC dehydratase;
pfam_id MaoC_dehydratas; MaoC_dehydrat_N;
pfam_target db:Pfam-A.hmm|PF01575.19 evalue:4.4e-10 score:38.4 best_domain_score:38.0 name:MaoC_dehydratas; db:Pfam-A.hmm|PF13452.6 evalue:1.1e-07 score:31.3 best_domain_score:31.0 name:MaoC_dehydrat_N;
43641 44357 CDS
ID metaerg.pl|08619
allgo_ids GO:0000160; GO:0005829; GO:0032993; GO:0001216; GO:0003700; GO:0000156; GO:0000976; GO:0006817;
allko_ids K02486; K13761; K11383; K12767; K07769; K04757; K11357; K10125; K07647; K07717; K07675; K07650; K10681; K07676; K06379; K07709; K07644; K02482; K02480; K07638; K07653; K07636; K11527; K02030; K07678; K10715; K02668; K03388; K08479; K10916; K02489; K07716; K07640; K07710; K01768; K07677; K07645; K07708; K10909; K07704; K08282; K01937; K11231; K13490; K02491; K11711; K07642; K00760; K02484; K11356; K11640; K11354; K07778; K07768; K02575; K08884; K07711; K02478; K07679; K07648; K07651; K07718; K07654; K07682; K03407; K07637; K07646; K07641; K07673; K01120; K07639; K08475; K07652; K07658;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583785.1 1 238 evalue:1.6e-127 qcov:100.00 identity:97.90;
kegg_pathway_id 00230; 05111; 00240; 00983; 00790; 02020; 04011; 03090;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; Drug metabolism - other enzymes; Folate biosynthesis; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:6.4e-31 score:106.1 best_domain_score:105.6 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:5.3e-30 score:102.6 best_domain_score:102.6 name:Trans_reg_C;
sprot_desc Alkaline phosphatase synthesis transcriptional regulatory protein PhoP;
sprot_id sp|P13792|PHOP_BACSU;
sprot_target db:uniprot_sprot|sp|P13792|PHOP_BACSU 1 238 evalue:4.5e-89 qcov:100.00 identity:67.50;
44350 46128 CDS
ID metaerg.pl|08620
allec_ids 2.7.13.3;
allgo_ids GO:0007165; GO:0016021; GO:0005887; GO:0005524; GO:0009927; GO:0000155; GO:0004673; GO:0006817; GO:0046777; GO:0006355;
allko_ids K07710; K07640; K01768; K07656; K02489; K07697; K11614; K07716; K08479; K07674; K10916; K02668; K03388; K07678; K10715; K13587; K11527; K02030; K07701; K07638; K07653; K07636; K14489; K02482; K08801; K02480; K07644; K13532; K07709; K07650; K10681; K07676; K06379; K01769; K11637; K07717; K07675; K07680; K07647; K13040; K10942; K04757; K11357; K02476; K10125; K02342; K11629; K02486; K11383; K12767; K14509; K11520; K07769; K07652; K07646; K13598; K07641; K07673; K08475; K07639; K03407; K07637; K07654; K07777; K07649; K07682; K00936; K11623; K07651; K07698; K07718; K02478; K07679; K07648; K08884; K07711; K00873; K11328; K13533; K11354; K07683; K07778; K07768; K11633; K11356; K11640; K04486; K02484; K07642; K11711; K02491; K11231; K07643; K07704; K10909; K08282; K07645; K07708; K07677;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583786.1 1 592 evalue:0.0e+00 qcov:100.00 identity:95.90;
kegg_pathway_id 04011; 02020; 03090; 00620; 00790; 00340; 00710; 00010; 00230; 05111; 03030;
kegg_pathway_name MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism; Folate biosynthesis; Histidine metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Purine metabolism; Vibrio cholerae pathogenic cycle; DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF00672; PF02518; PF00512; PF00989; PF08448; PF16736;
pfam_desc HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; Single Cache-like;
pfam_id HAMP; HATPase_c; HisKA; PAS; PAS_4; sCache_like;
pfam_target db:Pfam-A.hmm|PF00672.25 evalue:9.2e-07 score:28.4 best_domain_score:28.4 name:HAMP; db:Pfam-A.hmm|PF02518.26 evalue:4.4e-29 score:100.5 best_domain_score:99.2 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:5.5e-20 score:70.4 best_domain_score:64.6 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:3.3e-13 score:48.9 best_domain_score:47.6 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:3.5e-07 score:29.7 best_domain_score:28.5 name:PAS_4; db:Pfam-A.hmm|PF16736.5 evalue:6.6e-22 score:77.0 best_domain_score:72.7 name:sCache_like;
sp YES;
sprot_desc Alkaline phosphatase synthesis sensor protein PhoR;
sprot_id sp|P23545|PHOR_BACSU;
sprot_target db:uniprot_sprot|sp|P23545|PHOR_BACSU 1 585 evalue:7.3e-120 qcov:98.80 identity:43.80;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:4.6e-09 score:35.6 best_domain_score:34.8 name:TIGR00229;
tm_num 2;
44350 44433 signal_peptide
ID metaerg.pl|08621
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
44350 46128 transmembrane_helix
ID metaerg.pl|08622
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology o44377-44445i44839-44898o;
46659 47573 CDS
ID metaerg.pl|08623
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583787.1 1 304 evalue:1.2e-159 qcov:100.00 identity:94.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF11906;
pfam_desc Protein of unknown function (DUF3426);
pfam_id DUF3426;
pfam_target db:Pfam-A.hmm|PF11906.8 evalue:8.3e-08 score:31.8 best_domain_score:16.1 name:DUF3426;
tigrfam_acc TIGR04398; TIGR04399;
tigrfam_desc SLAP domain; accessory Sec system S-layer assembly protein;
tigrfam_mainrole Protein fate;
tigrfam_name SLAP_DUP; acc_Sec_SLAP;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR04398 evalue:2.8e-78 score:259.2 best_domain_score:136.1 name:TIGR04398; db:TIGRFAMs.hmm|TIGR04399 evalue:1.9e-98 score:328.5 best_domain_score:328.2 name:TIGR04399;
47796 50438 CDS
ID metaerg.pl|08624
allec_ids 2.7.7.7;
allgo_ids GO:0003677; GO:0003824; GO:0005737; GO:0008408; GO:0008409; GO:0003887; GO:0006281; GO:0006261;
allko_ids K02332; K02349; K02335; K02334;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583788.1 4 880 evalue:0.0e+00 qcov:99.70 identity:95.80;
kegg_pathway_id 00230; 03410; 03030; 00240; 03440; 03420;
kegg_pathway_name Purine metabolism; Base excision repair; DNA replication; Pyrimidine metabolism; Homologous recombination; Nucleotide excision repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF01367; PF02739; PF00476;
pfam_desc 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A;
pfam_id 5_3_exonuc; 5_3_exonuc_N; DNA_pol_A;
pfam_target db:Pfam-A.hmm|PF01367.20 evalue:7.3e-35 score:118.7 best_domain_score:117.1 name:5_3_exonuc; db:Pfam-A.hmm|PF02739.16 evalue:5.4e-54 score:181.6 best_domain_score:180.7 name:5_3_exonuc_N; db:Pfam-A.hmm|PF00476.20 evalue:3.6e-162 score:538.9 best_domain_score:538.5 name:DNA_pol_A;
sprot_desc DNA polymerase I;
sprot_id sp|O34996|DPO1_BACSU;
sprot_target db:uniprot_sprot|sp|O34996|DPO1_BACSU 6 880 evalue:1.7e-306 qcov:99.40 identity:61.00;
tigrfam_acc TIGR00593;
tigrfam_desc DNA polymerase I;
tigrfam_mainrole DNA metabolism;
tigrfam_name pola;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00593 evalue:0 score:1095.3 best_domain_score:1095.1 name:TIGR00593;
50453 51289 CDS
ID metaerg.pl|08625
allec_ids 3.2.2.23;
allgo_ids GO:0003684; GO:0003906; GO:0006284; GO:0008270; GO:0016799; GO:0140078; GO:0008534; GO:0006289;
allko_ids K05522; K10563;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583789.1 1 278 evalue:3.5e-150 qcov:100.00 identity:96.80;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF01149; PF06831; PF06827;
pfam_desc Formamidopyrimidine-DNA glycosylase N-terminal domain; Formamidopyrimidine-DNA glycosylase H2TH domain; Zinc finger found in FPG and IleRS;
pfam_id Fapy_DNA_glyco; H2TH; zf-FPG_IleRS;
pfam_target db:Pfam-A.hmm|PF01149.24 evalue:4.5e-32 score:110.3 best_domain_score:109.4 name:Fapy_DNA_glyco; db:Pfam-A.hmm|PF06831.14 evalue:9.6e-30 score:101.7 best_domain_score:100.8 name:H2TH; db:Pfam-A.hmm|PF06827.14 evalue:4.2e-08 score:32.1 best_domain_score:32.1 name:zf-FPG_IleRS;
sprot_desc Formamidopyrimidine-DNA glycosylase;
sprot_id sp|C0Z7Z0|FPG_BREBN;
sprot_target db:uniprot_sprot|sp|C0Z7Z0|FPG_BREBN 1 275 evalue:3.9e-92 qcov:98.90 identity:59.40;
tigrfam_acc TIGR00577;
tigrfam_desc DNA-formamidopyrimidine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name fpg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00577 evalue:1e-101 score:339.1 best_domain_score:338.9 name:TIGR00577;
51292 51891 CDS
ID metaerg.pl|08626
allec_ids 2.7.1.24;
allgo_ids GO:0004140; GO:0005524; GO:0015937; GO:0005737;
allko_ids K00859;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583790.1 1 199 evalue:5.8e-99 qcov:100.00 identity:94.00;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id PANTOSYN-PWY; PWY-4242; PWY-4221; COA-PWY;
metacyc_pathway_name superpathway of coenzyme A biosynthesis I (bacteria);; ; superpathway of coenzyme A biosynthesis II (plants);; coenzyme A biosynthesis I (prokaryotic);;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; ; CoA-Biosynthesis; Super-Pathways;; CoA-Biosynthesis;;
pfam_acc PF01121;
pfam_desc Dephospho-CoA kinase;
pfam_id CoaE;
pfam_target db:Pfam-A.hmm|PF01121.20 evalue:1.6e-66 score:222.6 best_domain_score:222.4 name:CoaE;
sprot_desc Dephospho-CoA kinase;
sprot_id sp|Q9K857|COAE_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K857|COAE_BACHD 1 197 evalue:1.7e-49 qcov:99.00 identity:50.80;
tigrfam_acc TIGR00152;
tigrfam_desc dephospho-CoA kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00152;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00152 evalue:4.3e-68 score:228.0 best_domain_score:227.7 name:TIGR00152;
52200 53228 CDS
ID metaerg.pl|08627
allec_ids 1.2.1.59; 1.2.1.-;
allgo_ids GO:0016620; GO:0055114; GO:0005737; GO:0043891; GO:0004365; GO:0051287; GO:0050661; GO:0006094; GO:0006006;
allko_ids K10705; K00134;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583792.1 1 342 evalue:3.1e-193 qcov:100.00 identity:99.40;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; PWY-5482; PWY-5537; TOLSULFDEG-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; P105-PWY; PWY-5305; P41-PWY; PWY-6537; PWY-321; 4TOLCARBDEG-PWY; ANARESP1-PWY; PWY-5195;
metacyc_pathway_name 4-hydroxyphenylacetate degradation;; pyruvate fermentation to acetate II;; pyruvate fermentation to acetate V;; 4-toluenesulfonate degradation I;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; TCA cycle IV (2-oxoglutarate decarboxylase);; bixin biosynthesis;; pyruvate fermentation to acetate and (S)-lactate I;; 4-aminobutanoate degradation II;; cutin biosynthesis;; 4-toluenecarboxylate degradation;; ; artemisinin and arteannuin B biosynthesis;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;; Pyruvate-Acetate-Fermentation;; Pyruvate-Acetate-Fermentation; Super-Pathways;; 4-Toluenesulfonate-Degradation;; Energy-Metabolism; Super-Pathways;; TCA-VARIANTS;; APOCAROTENOID-SYN;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; 4-Aminobutyraye-Degradation;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; ; SESQUITERPENE-LACTONE;;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:7.8e-70 score:232.8 best_domain_score:232.1 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:3.5e-38 score:129.2 best_domain_score:124.4 name:Gp_dh_N;
sprot_desc Glyceraldehyde-3-phosphate dehydrogenase 2;
sprot_id sp|O34425|G3P2_BACSU;
sprot_target db:uniprot_sprot|sp|O34425|G3P2_BACSU 2 331 evalue:6.4e-137 qcov:96.50 identity:70.30;
tigrfam_acc TIGR01534;
tigrfam_desc glyceraldehyde-3-phosphate dehydrogenase, type I;
tigrfam_mainrole Energy metabolism;
tigrfam_name GAPDH-I;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01534 evalue:1e-135 score:451.3 best_domain_score:451.2 name:TIGR01534;
53441 53040 CDS
ID metaerg.pl|08628
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
53460 53852 CDS
ID metaerg.pl|08629
allec_ids 4.1.1.50;
allgo_ids GO:0004014; GO:0008295; GO:0006557;
allko_ids K01611;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583793.1 1 130 evalue:1.7e-62 qcov:100.00 identity:92.30;
kegg_pathway_id 00220; 00271;
kegg_pathway_name Urea cycle and metabolism of amino groups; Methionine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id ARGSPECAT-PWY; ARG+POLYAMINE-SYN; BSUBPOLYAMSYN-PWY; POLYAMSYN-PWY; POLYAMINSYN3-PWY;
metacyc_pathway_name spermine biosynthesis;; superpathway of arginine and polyamine biosynthesis;; spermidine biosynthesis I;; superpathway of polyamine biosynthesis I;; superpathway of polyamine biosynthesis II;;
metacyc_pathway_type Polyamine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; Spermidine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;;
pfam_acc PF02675;
pfam_desc S-adenosylmethionine decarboxylase;
pfam_id AdoMet_dc;
pfam_target db:Pfam-A.hmm|PF02675.15 evalue:3.6e-38 score:129.3 best_domain_score:129.1 name:AdoMet_dc;
sprot_desc S-adenosylmethionine decarboxylase proenzyme 2;
sprot_id sp|Q9K859|SPEH2_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K859|SPEH2_BACHD 1 125 evalue:2.6e-54 qcov:96.20 identity:80.00;
tigrfam_acc TIGR03330;
tigrfam_desc S-adenosylmethionine decarboxylase proenzyme;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name SAM_DCase_Bsu;
tigrfam_sub1role Polyamine biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR03330 evalue:6.4e-42 score:141.6 best_domain_score:141.4 name:TIGR03330;
54194 54595 CDS
ID metaerg.pl|08630
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583794.1 1 132 evalue:3.8e-62 qcov:99.20 identity:91.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
54622 55083 CDS
ID metaerg.pl|08631
allgo_ids GO:0005524; GO:0003677; GO:0008270; GO:0045892;
allko_ids K00527; K07738;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583795.1 1 153 evalue:2.5e-81 qcov:100.00 identity:99.30;
kegg_pathway_id 00230; 00240;
kegg_pathway_name Purine metabolism; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF03477;
pfam_desc ATP cone domain;
pfam_id ATP-cone;
pfam_target db:Pfam-A.hmm|PF03477.16 evalue:2.2e-20 score:72.3 best_domain_score:71.8 name:ATP-cone;
sprot_desc Transcriptional repressor NrdR;
sprot_id sp|Q65GA0|NRDR_BACLD;
sprot_target db:uniprot_sprot|sp|Q65GA0|NRDR_BACLD 1 150 evalue:2.4e-59 qcov:98.00 identity:73.30;
tigrfam_acc TIGR00244;
tigrfam_desc transcriptional regulator NrdR;
tigrfam_mainrole Regulatory functions;
tigrfam_name TIGR00244;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00244 evalue:5.5e-67 score:223.5 best_domain_score:223.4 name:TIGR00244;
55303 56685 CDS
ID metaerg.pl|08632
allgo_ids GO:1990077; GO:0005524; GO:0003677; GO:0006269;
allko_ids K03346;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583796.1 1 460 evalue:2.8e-245 qcov:100.00 identity:96.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF07261;
pfam_desc Replication initiation and membrane attachment;
pfam_id DnaB_2;
pfam_target db:Pfam-A.hmm|PF07261.11 evalue:2e-11 score:42.7 best_domain_score:41.2 name:DnaB_2;
sprot_desc Replication initiation and membrane attachment protein;
sprot_id sp|P07908|DNAB_BACSU;
sprot_target db:uniprot_sprot|sp|P07908|DNAB_BACSU 3 454 evalue:1.1e-51 qcov:98.30 identity:31.20;
56692 57630 CDS
ID metaerg.pl|08633
allgo_ids GO:0005524; GO:1990077; GO:0006260; GO:0006269; GO:0006271;
allko_ids K11144;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583797.1 1 312 evalue:1.4e-179 qcov:100.00 identity:99.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF00004; PF03969; PF00308; PF07319; PF01695; PF00910;
pfam_desc ATPase family associated with various cellular activities (AAA); AFG1-like ATPase; Bacterial dnaA protein; Primosomal protein DnaI N-terminus; IstB-like ATP binding protein; RNA helicase;
pfam_id AAA; AFG1_ATPase; Bac_DnaA; DnaI_N; IstB_IS21; RNA_helicase;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:5.6e-07 score:29.3 best_domain_score:28.5 name:AAA; db:Pfam-A.hmm|PF03969.16 evalue:5.4e-05 score:21.5 best_domain_score:21.1 name:AFG1_ATPase; db:Pfam-A.hmm|PF00308.18 evalue:2.6e-09 score:36.5 best_domain_score:35.9 name:Bac_DnaA; db:Pfam-A.hmm|PF07319.11 evalue:3.3e-25 score:87.8 best_domain_score:86.8 name:DnaI_N; db:Pfam-A.hmm|PF01695.17 evalue:2.4e-16 score:59.2 best_domain_score:58.6 name:IstB_IS21; db:Pfam-A.hmm|PF00910.22 evalue:1.7e-05 score:24.4 best_domain_score:22.0 name:RNA_helicase;
sprot_desc Primosomal protein DnaI;
sprot_id sp|P06567|DNAI_BACSU;
sprot_target db:uniprot_sprot|sp|P06567|DNAI_BACSU 1 310 evalue:9.5e-79 qcov:99.40 identity:46.50;
57788 58894 CDS
ID metaerg.pl|08634
allec_ids 1.21.98.1;
allgo_ids GO:0003824; GO:0051536; GO:0051539; GO:0005506; GO:0046992; GO:0016765; GO:0009234;
allko_ids K11784;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583798.1 1 368 evalue:5.9e-214 qcov:100.00 identity:99.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF04055;
pfam_desc Radical SAM superfamily;
pfam_id Radical_SAM;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:8.3e-23 score:80.8 best_domain_score:79.9 name:Radical_SAM;
sprot_desc Cyclic dehypoxanthine futalosine synthase;
sprot_id sp|Q9K864|MQNC_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K864|MQNC_BACHD 1 368 evalue:6.9e-161 qcov:100.00 identity:73.80;
tigrfam_acc TIGR00423; TIGR03699;
tigrfam_desc radical SAM domain protein, CofH subfamily; dehypoxanthine futalosine cyclase;
tigrfam_mainrole Hypothetical proteins; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00423; menaquin_MqnC;
tigrfam_sub1role Conserved; Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR00423 evalue:1.6e-97 score:325.7 best_domain_score:325.4 name:TIGR00423; db:TIGRFAMs.hmm|TIGR03699 evalue:2e-142 score:473.2 best_domain_score:473.0 name:TIGR03699;
59230 61164 CDS
ID metaerg.pl|08635
allec_ids 6.1.1.3;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0046872; GO:0004829; GO:0000049; GO:0006435;
allko_ids K01868;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583799.1 1 644 evalue:0.0e+00 qcov:100.00 identity:98.90;
kegg_pathway_id 00260; 00970;
kegg_pathway_name Glycine, serine and threonine metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03129; PF02824; PF00587; PF07973;
pfam_desc Anticodon binding domain; TGS domain; tRNA synthetase class II core domain (G, H, P, S and T); Threonyl and Alanyl tRNA synthetase second additional domain;
pfam_id HGTP_anticodon; TGS; tRNA-synt_2b; tRNA_SAD;
pfam_target db:Pfam-A.hmm|PF03129.20 evalue:3.2e-22 score:77.7 best_domain_score:77.7 name:HGTP_anticodon; db:Pfam-A.hmm|PF02824.21 evalue:3.4e-12 score:45.5 best_domain_score:43.3 name:TGS; db:Pfam-A.hmm|PF00587.25 evalue:4.8e-36 score:123.6 best_domain_score:122.4 name:tRNA-synt_2b; db:Pfam-A.hmm|PF07973.14 evalue:9.9e-16 score:56.8 best_domain_score:55.3 name:tRNA_SAD;
sprot_desc Threonine--tRNA ligase;
sprot_id sp|Q8EPF3|SYT_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8EPF3|SYT_OCEIH 1 642 evalue:6.1e-298 qcov:99.70 identity:77.00;
tigrfam_acc TIGR00418;
tigrfam_desc threonine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name thrS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00418 evalue:4.1e-236 score:784.4 best_domain_score:784.2 name:TIGR00418;
61751 62260 CDS
ID metaerg.pl|08636
allgo_ids GO:0006413; GO:0005737; GO:0003743;
allko_ids K02520;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583802.1 1 169 evalue:9.6e-87 qcov:100.00 identity:98.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF00707; PF05198;
pfam_desc Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain;
pfam_id IF3_C; IF3_N;
pfam_target db:Pfam-A.hmm|PF00707.22 evalue:1.7e-38 score:129.7 best_domain_score:129.0 name:IF3_C; db:Pfam-A.hmm|PF05198.16 evalue:9.5e-34 score:114.7 best_domain_score:113.8 name:IF3_N;
sprot_desc Translation initiation factor IF-3;
sprot_id sp|Q9K867|IF3_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K867|IF3_BACHD 1 166 evalue:1.1e-73 qcov:98.20 identity:81.90;
tigrfam_acc TIGR00168;
tigrfam_desc translation initiation factor IF-3;
tigrfam_mainrole Protein synthesis;
tigrfam_name infC;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00168 evalue:5.3e-72 score:240.0 best_domain_score:239.8 name:TIGR00168;
62339 62530 CDS
ID metaerg.pl|08637
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02916;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583803.1 1 63 evalue:2.5e-24 qcov:100.00 identity:98.40;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF01632;
pfam_desc Ribosomal protein L35;
pfam_id Ribosomal_L35p;
pfam_target db:Pfam-A.hmm|PF01632.19 evalue:6.6e-26 score:89.8 best_domain_score:89.7 name:Ribosomal_L35p;
sprot_desc 50S ribosomal protein L35;
sprot_id sp|C5D637|RL35_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D637|RL35_GEOSW 1 62 evalue:1.5e-18 qcov:98.40 identity:75.80;
tigrfam_GO GO:0000315;
tigrfam_acc TIGR00001;
tigrfam_desc ribosomal protein bL35;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpmI_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00001 evalue:5.4e-24 score:83.4 best_domain_score:83.3 name:TIGR00001;
62577 62933 CDS
ID metaerg.pl|08638
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843; GO:0000027;
allko_ids K02887;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583804.1 1 118 evalue:1.2e-56 qcov:100.00 identity:99.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF00453;
pfam_desc Ribosomal protein L20;
pfam_id Ribosomal_L20;
pfam_target db:Pfam-A.hmm|PF00453.18 evalue:2.2e-48 score:162.0 best_domain_score:161.8 name:Ribosomal_L20;
sprot_desc 50S ribosomal protein L20;
sprot_id sp|Q9K869|RL20_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K869|RL20_BACHD 1 117 evalue:1.5e-45 qcov:99.20 identity:81.20;
tigrfam_acc TIGR01032;
tigrfam_desc ribosomal protein bL20;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplT_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01032 evalue:2.2e-48 score:162.4 best_domain_score:162.3 name:TIGR01032;
63009 63266 CDS
ID metaerg.pl|08639
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583805.1 1 85 evalue:7.8e-37 qcov:100.00 identity:91.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF06961;
pfam_desc Protein of unknown function (DUF1294);
pfam_id DUF1294;
pfam_target db:Pfam-A.hmm|PF06961.13 evalue:1.4e-16 score:59.7 best_domain_score:59.1 name:DUF1294;
tm_num 2;
63009 63266 transmembrane_helix
ID metaerg.pl|08640
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology o63018-63071i63192-63260o;
63282 63842 CDS
ID metaerg.pl|08641
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583806.1 1 186 evalue:5.1e-89 qcov:100.00 identity:91.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF09335;
pfam_desc SNARE associated Golgi protein;
pfam_id SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF09335.11 evalue:5.5e-11 score:42.2 best_domain_score:41.1 name:SNARE_assoc;
tm_num 4;
63282 63842 transmembrane_helix
ID metaerg.pl|08642
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology i63318-63386o63429-63497i63663-63731o63741-63800i;
64313 63909 CDS
ID metaerg.pl|08643
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583807.1 1 134 evalue:2.6e-66 qcov:100.00 identity:99.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
tm_num 1;
64313 63909 transmembrane_helix
ID metaerg.pl|08644
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology o63921-63989i;
64584 65084 CDS
ID metaerg.pl|08645
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583808.1 1 166 evalue:1.1e-74 qcov:100.00 identity:87.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF08761;
pfam_desc dUTPase;
pfam_id dUTPase_2;
pfam_target db:Pfam-A.hmm|PF08761.11 evalue:9.1e-45 score:152.0 best_domain_score:151.9 name:dUTPase_2;
65175 66254 CDS
ID metaerg.pl|08646
allec_ids 3.4.11.-;
allgo_ids GO:0016787; GO:0004177; GO:0046872; GO:0008237;
allko_ids K01180; K01179;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583809.1 1 359 evalue:6.4e-205 qcov:100.00 identity:99.20;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF01546; PF04389; PF05343;
pfam_desc Peptidase family M20/M25/M40; Peptidase family M28; M42 glutamyl aminopeptidase;
pfam_id Peptidase_M20; Peptidase_M28; Peptidase_M42;
pfam_target db:Pfam-A.hmm|PF01546.28 evalue:2.3e-09 score:36.5 best_domain_score:35.7 name:Peptidase_M20; db:Pfam-A.hmm|PF04389.17 evalue:1.6e-07 score:30.4 best_domain_score:23.0 name:Peptidase_M28; db:Pfam-A.hmm|PF05343.14 evalue:1.5e-117 score:391.0 best_domain_score:390.7 name:Peptidase_M42;
sprot_desc Putative aminopeptidase YsdC;
sprot_id sp|P94521|YSDC_BACSU;
sprot_target db:uniprot_sprot|sp|P94521|YSDC_BACSU 1 358 evalue:1.5e-160 qcov:99.70 identity:76.00;
67274 68098 CDS
ID metaerg.pl|08647
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583811.1 1 274 evalue:6.2e-144 qcov:100.00 identity:100.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF10035; PF02588;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2179); Uncharacterised 5xTM membrane BCR, YitT family COG1284;
pfam_id DUF2179; YitT_membrane;
pfam_target db:Pfam-A.hmm|PF10035.9 evalue:6.6e-21 score:73.1 best_domain_score:72.4 name:DUF2179; db:Pfam-A.hmm|PF02588.15 evalue:6.6e-56 score:188.2 best_domain_score:186.9 name:YitT_membrane;
sprot_desc hypothetical protein;
sprot_id sp|P39803|YITT_BACSU;
sprot_target db:uniprot_sprot|sp|P39803|YITT_BACSU 7 273 evalue:1.1e-57 qcov:97.40 identity:41.40;
tm_num 5;
67274 68098 transmembrane_helix
ID metaerg.pl|08648
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology i67286-67354o67397-67474i67493-67561o67574-67642i67700-67768o;
68129 68884 CDS
ID metaerg.pl|08649
allec_ids 2.1.1.-;
allgo_ids GO:0003723; GO:0006396; GO:0008173;
allko_ids K03218; K03437;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583812.1 1 251 evalue:5.0e-132 qcov:100.00 identity:93.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id PWY-5857; PWY-6303; PWY-6151; PWY-5209; PWY-5855; UBISYN-PWY; PWY-6154; PWY-6424; PWY-6142; PWY-5856; METH-ACETATE-PWY; PWY-6519; PWY-5773; PWY-5328; METHIONINE-DEG1-PWY; PWY-5116; PWY-1581; CO2FORM-PWY; PWY-6292; PWY-5479; PWY-5987; PWY-6427; PWY-6395; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; CODH-PWY; PWY-6442; PWY-6575; PWY-6477; PWY-5467; PWY-6153; ALL-CHORISMATE-PWY; PWY-3542; PWY-4021; PWY-5041; PWY-5864; PWY-5975; PWY-1061; PWY-5876; PWY-1422; PWY-5729; PWY-6113; PWY-5305; PWYG-321;
metacyc_pathway_name ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; S-adenosyl-L-methionine cycle I;; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; methanogenesis from acetate;; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; xanthohumol biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; gibberellin inactivation II (methylation);; gramine biosynthesis;; autoinducer AI-2 biosynthesis I;; superpathway of chorismate metabolism;; choline biosynthesis II;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; vitamin E biosynthesis (tocopherols);; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; S-adenosyl-L-methionine-cycle; Super-Pathways;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; Autotrophic-CO2-Fixation;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; Autoinducer-Biosynthesis;; Super-Pathways;; Choline-Biosynthesis;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;;
pfam_acc PF00588; PF08032;
pfam_desc SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding;
pfam_id SpoU_methylase; SpoU_sub_bind;
pfam_target db:Pfam-A.hmm|PF00588.19 evalue:1.6e-37 score:128.0 best_domain_score:127.4 name:SpoU_methylase; db:Pfam-A.hmm|PF08032.12 evalue:6.9e-15 score:54.3 best_domain_score:53.5 name:SpoU_sub_bind;
sprot_desc Uncharacterized tRNA/rRNA methyltransferase YsgA;
sprot_id sp|P94538|YSGA_BACSU;
sprot_target db:uniprot_sprot|sp|P94538|YSGA_BACSU 1 250 evalue:7.5e-66 qcov:99.60 identity:50.20;
69227 70261 CDS
ID metaerg.pl|08650
allec_ids 6.1.1.20;
allgo_ids GO:0000166; GO:0004826; GO:0005524; GO:0005737; GO:0006432; GO:0000287; GO:0000049;
allko_ids K01889;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583813.1 1 344 evalue:2.7e-192 qcov:100.00 identity:97.10;
kegg_pathway_id 00970; 00400;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF02912; PF01409;
pfam_desc Aminoacyl tRNA synthetase class II, N-terminal domain; tRNA synthetases class II core domain (F);
pfam_id Phe_tRNA-synt_N; tRNA-synt_2d;
pfam_target db:Pfam-A.hmm|PF02912.18 evalue:1.2e-27 score:94.9 best_domain_score:94.2 name:Phe_tRNA-synt_N; db:Pfam-A.hmm|PF01409.20 evalue:1.8e-108 score:360.9 best_domain_score:360.5 name:tRNA-synt_2d;
sprot_desc Phenylalanine--tRNA ligase alpha subunit;
sprot_id sp|C5D627|SYFA_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D627|SYFA_GEOSW 1 343 evalue:3.7e-148 qcov:99.70 identity:72.90;
tigrfam_acc TIGR00468;
tigrfam_desc phenylalanine--tRNA ligase, alpha subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name pheS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00468 evalue:2.6e-115 score:384.3 best_domain_score:378.1 name:TIGR00468;
70285 72702 CDS
ID metaerg.pl|08651
allec_ids 6.1.1.20;
allgo_ids GO:0003723; GO:0004826; GO:0005737; GO:0005524; GO:0000287; GO:0000049; GO:0006432;
allko_ids K01890;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583814.1 1 805 evalue:0.0e+00 qcov:100.00 identity:96.30;
kegg_pathway_id 00970; 00400;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03483; PF03484; PF03147; PF01588; PF17759;
pfam_desc B3/4 domain; tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; Phenylalanyl tRNA synthetase beta chain CLM domain;
pfam_id B3_4; B5; FDX-ACB; tRNA_bind; tRNA_synthFbeta;
pfam_target db:Pfam-A.hmm|PF03483.17 evalue:3.5e-61 score:205.1 best_domain_score:204.1 name:B3_4; db:Pfam-A.hmm|PF03484.15 evalue:4.1e-19 score:67.9 best_domain_score:65.1 name:B5; db:Pfam-A.hmm|PF03147.14 evalue:4.3e-30 score:103.2 best_domain_score:101.5 name:FDX-ACB; db:Pfam-A.hmm|PF01588.20 evalue:3.7e-25 score:87.1 best_domain_score:86.0 name:tRNA_bind; db:Pfam-A.hmm|PF17759.1 evalue:1.2e-65 score:220.1 best_domain_score:219.4 name:tRNA_synthFbeta;
sprot_desc Phenylalanine--tRNA ligase beta subunit;
sprot_id sp|Q9K896|SYFB_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K896|SYFB_BACHD 1 803 evalue:5.8e-261 qcov:99.80 identity:56.90;
tigrfam_acc TIGR00472;
tigrfam_desc phenylalanine--tRNA ligase, beta subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name pheT_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00472 evalue:8.9e-262 score:870.0 best_domain_score:869.9 name:TIGR00472;
74375 73437 CDS
ID metaerg.pl|08652
allec_ids 3.1.26.4;
allgo_ids GO:0005737; GO:0032299; GO:0000287; GO:0003723; GO:0004523; GO:0043137; GO:0006298;
allko_ids K03471;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583815.1 1 312 evalue:1.2e-167 qcov:100.00 identity:95.80;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF11858; PF01351;
pfam_desc Domain of unknown function (DUF3378); Ribonuclease HII;
pfam_id DUF3378; RNase_HII;
pfam_target db:Pfam-A.hmm|PF11858.8 evalue:1.1e-26 score:92.0 best_domain_score:91.1 name:DUF3378; db:Pfam-A.hmm|PF01351.18 evalue:5.5e-38 score:130.0 best_domain_score:129.7 name:RNase_HII;
sprot_desc Ribonuclease HIII;
sprot_id sp|P94541|RNH3_BACSU;
sprot_target db:uniprot_sprot|sp|P94541|RNH3_BACSU 1 308 evalue:1.5e-76 qcov:98.70 identity:50.00;
tigrfam_acc TIGR00716;
tigrfam_desc ribonuclease HIII;
tigrfam_mainrole DNA metabolism;
tigrfam_name rnhC;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00716 evalue:1.9e-78 score:262.8 best_domain_score:262.6 name:TIGR00716;
74594 74845 CDS
ID metaerg.pl|08653
allgo_ids GO:0005737; GO:0000917;
allko_ids K09888;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583816.1 1 83 evalue:7.2e-35 qcov:100.00 identity:97.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF05164;
pfam_desc Cell division protein ZapA;
pfam_id ZapA;
pfam_target db:Pfam-A.hmm|PF05164.13 evalue:3.5e-18 score:65.0 best_domain_score:64.7 name:ZapA;
sprot_desc Cell division protein ZapA;
sprot_id sp|Q5WEJ7|ZAPA_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WEJ7|ZAPA_BACSK 1 76 evalue:9.2e-13 qcov:91.60 identity:48.70;
74851 75393 CDS
ID metaerg.pl|08654
allgo_ids GO:0009403; GO:0016020;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583817.1 1 180 evalue:2.4e-88 qcov:100.00 identity:95.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF02674;
pfam_desc Colicin V production protein;
pfam_id Colicin_V;
pfam_target db:Pfam-A.hmm|PF02674.16 evalue:2.2e-36 score:124.2 best_domain_score:124.0 name:Colicin_V;
tm_num 4;
74851 75393 transmembrane_helix
ID metaerg.pl|08655
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology i74854-74901o74911-74979i75079-75147o75205-75273i;
75489 77198 CDS
ID metaerg.pl|08656
allec_ids 2.7.7.7; 3.1.11.1;
allgo_ids GO:0003824; GO:0003677; GO:0003887; GO:0008852; GO:0046872; GO:0006281; GO:0006260;
allko_ids K04486; K02337; K02323; K02347;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583818.1 1 569 evalue:5.4e-307 qcov:100.00 identity:96.00;
kegg_pathway_id 00340; 03030;
kegg_pathway_name Histidine metabolism; DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF14791; PF14520; PF14716; PF02811;
pfam_desc DNA polymerase beta thumb ; Helix-hairpin-helix domain; Helix-hairpin-helix domain; PHP domain;
pfam_id DNA_pol_B_thumb; HHH_5; HHH_8; PHP;
pfam_target db:Pfam-A.hmm|PF14791.6 evalue:1.1e-17 score:63.2 best_domain_score:60.9 name:DNA_pol_B_thumb; db:Pfam-A.hmm|PF14520.6 evalue:1.5e-09 score:37.5 best_domain_score:32.9 name:HHH_5; db:Pfam-A.hmm|PF14716.6 evalue:6.9e-19 score:67.2 best_domain_score:58.2 name:HHH_8; db:Pfam-A.hmm|PF02811.19 evalue:2e-09 score:37.2 best_domain_score:36.0 name:PHP;
sprot_desc DNA polymerase/3'-5' exonuclease PolX;
sprot_id sp|P94544|POLX_BACSU;
sprot_target db:uniprot_sprot|sp|P94544|POLX_BACSU 1 566 evalue:2.8e-185 qcov:99.50 identity:58.20;
77222 79585 CDS
ID metaerg.pl|08657
allec_ids 3.1.-.-;
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0016887; GO:0004519; GO:0045910;
allko_ids K07456;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583819.1 1 787 evalue:0.0e+00 qcov:100.00 identity:96.40;
kegg_pathway_id 03430;
kegg_pathway_name Mismatch repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00488; PF01713;
pfam_desc MutS domain V; Smr domain;
pfam_id MutS_V; Smr;
pfam_target db:Pfam-A.hmm|PF00488.21 evalue:3.1e-34 score:117.9 best_domain_score:116.9 name:MutS_V; db:Pfam-A.hmm|PF01713.21 evalue:8.3e-19 score:67.0 best_domain_score:65.5 name:Smr;
sprot_desc Endonuclease MutS2;
sprot_id sp|Q9K8A0|MUTS2_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K8A0|MUTS2_BACHD 2 787 evalue:8.2e-244 qcov:99.90 identity:64.90;
tigrfam_acc TIGR01069;
tigrfam_desc MutS2 family protein;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutS2;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01069 evalue:4.6e-262 score:870.9 best_domain_score:870.7 name:TIGR01069;
79604 80008 CDS
ID metaerg.pl|08658
allgo_ids GO:0016021; GO:0005886;
allko_ids K08989;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583820.1 1 134 evalue:1.8e-64 qcov:100.00 identity:96.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF03994;
pfam_desc Domain of Unknown Function (DUF350);
pfam_id DUF350;
pfam_target db:Pfam-A.hmm|PF03994.14 evalue:2.9e-22 score:77.8 best_domain_score:46.5 name:DUF350;
sprot_desc hypothetical protein;
sprot_id sp|P94546|YSHE_BACSU;
sprot_target db:uniprot_sprot|sp|P94546|YSHE_BACSU 1 134 evalue:1.5e-36 qcov:100.00 identity:53.70;
tm_num 4;
79604 80008 transmembrane_helix
ID metaerg.pl|08659
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
topology i79640-79708o79736-79795i79832-79900o79943-80002i;
81338 83026 CDS
ID metaerg.pl|08660
allec_ids 6.2.1.3;
allgo_ids GO:0003824; GO:0003996; GO:0005524; GO:0102391; GO:0004467;
allko_ids K01779; K00992; K02364; K01912; K05939; K01913; K01586; K00143; K03367; K01776; K01897; K01652; K00666; K01909; K01904; K01895; K01784;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583822.1 1 562 evalue:0.0e+00 qcov:100.00 identity:98.40;
kegg_pathway_id 00720; 00520; 00632; 00940; 00620; 00903; 00960; 00300; 00650; 00640; 00290; 00310; 00010; 00564; 00281; 00770; 01053; 00930; 00252; 00251; 00473; 00071; 00360; 00052; 00061; 00660; 00471;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Nucleotide sugars metabolism; Benzoate degradation via CoA ligation; Phenylpropanoid biosynthesis; Pyruvate metabolism; Limonene and pinene degradation; Alkaloid biosynthesis II; Lysine biosynthesis; Butanoate metabolism; Propanoate metabolism; Valine, leucine and isoleucine biosynthesis; Lysine degradation; Glycolysis / Gluconeogenesis; Glycerophospholipid metabolism; Geraniol degradation; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; Caprolactam degradation; Alanine and aspartate metabolism; Glutamate metabolism; D-Alanine metabolism; Fatty acid metabolism; Phenylalanine metabolism; Galactose metabolism; Fatty acid biosynthesis; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id PWY-561; PWY-5972; PWY-5143; P221-PWY; FAO-PWY; PWY-6001; PWY-6000; PWY-5995; PWY-5136;
metacyc_pathway_name superpathway of glyoxylate cycle and fatty acid degradation;; stearate biosynthesis I (animals and fungi);; long-chain fatty acid activation;; octane oxidation;; fatty acid β-oxidation I;; linoleate biosynthesis II (animals);; γ-linolenate biosynthesis II (animals);; linoleate biosynthesis I (plants);; fatty acid β-oxidation II (peroxisome);;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Stearate-Biosynthesis;; Activation; Lipid-Biosynthesis;; Other-Degradation;; Fatty-Acid-Degradation;; Linoleate-Biosynthesis;; Gamma-linolenate-Biosynthesis;; Linoleate-Biosynthesis;; Fatty-Acid-Degradation;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:6e-113 score:376.8 best_domain_score:376.6 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:8e-22 score:77.3 best_domain_score:75.2 name:AMP-binding_C;
sprot_desc Long-chain-fatty-acid--CoA ligase;
sprot_id sp|P94547|LCFA_BACSU;
sprot_target db:uniprot_sprot|sp|P94547|LCFA_BACSU 5 560 evalue:3.5e-196 qcov:98.90 identity:57.30;
83120 84814 CDS
ID metaerg.pl|08661
allec_ids 6.2.1.3;
allgo_ids GO:0003824; GO:0003996; GO:0005524; GO:0102391; GO:0004467;
allko_ids K00666; K01652; K01897; K01909; K01904; K01895; K01784; K05939; K01913; K01586; K01779; K02364; K00992; K01912; K00143; K03367; K01776;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583841.1 7 564 evalue:0.0e+00 qcov:98.90 identity:95.20;
kegg_pathway_id 00940; 00632; 00520; 00720; 00650; 00640; 00960; 00300; 00620; 00903; 01053; 00770; 00930; 00010; 00310; 00564; 00281; 00290; 00052; 00471; 00660; 00061; 00071; 00360; 00473; 00252; 00251;
kegg_pathway_name Phenylpropanoid biosynthesis; Benzoate degradation via CoA ligation; Nucleotide sugars metabolism; Reductive carboxylate cycle (CO2 fixation); Butanoate metabolism; Propanoate metabolism; Alkaloid biosynthesis II; Lysine biosynthesis; Pyruvate metabolism; Limonene and pinene degradation; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Caprolactam degradation; Glycolysis / Gluconeogenesis; Lysine degradation; Glycerophospholipid metabolism; Geraniol degradation; Valine, leucine and isoleucine biosynthesis; Galactose metabolism; D-Glutamine and D-glutamate metabolism; C5-Branched dibasic acid metabolism; Fatty acid biosynthesis; Fatty acid metabolism; Phenylalanine metabolism; D-Alanine metabolism; Alanine and aspartate metabolism; Glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id PWY-5995; PWY-5136; PWY-6000; PWY-6001; FAO-PWY; P221-PWY; PWY-5143; PWY-5972; PWY-561;
metacyc_pathway_name linoleate biosynthesis I (plants);; fatty acid β-oxidation II (peroxisome);; γ-linolenate biosynthesis II (animals);; linoleate biosynthesis II (animals);; fatty acid β-oxidation I;; octane oxidation;; long-chain fatty acid activation;; stearate biosynthesis I (animals and fungi);; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Linoleate-Biosynthesis;; Fatty-Acid-Degradation;; Gamma-linolenate-Biosynthesis;; Linoleate-Biosynthesis;; Fatty-Acid-Degradation;; Other-Degradation;; Activation; Lipid-Biosynthesis;; Stearate-Biosynthesis;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:1.8e-113 score:378.6 best_domain_score:378.3 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:7.7e-21 score:74.1 best_domain_score:72.9 name:AMP-binding_C;
sprot_desc Long-chain-fatty-acid--CoA ligase;
sprot_id sp|P94547|LCFA_BACSU;
sprot_target db:uniprot_sprot|sp|P94547|LCFA_BACSU 8 559 evalue:1.5e-194 qcov:97.90 identity:57.50;
84953 85561 CDS
ID metaerg.pl|08662
allgo_ids GO:0003677; GO:0005737; GO:0006631; GO:0016042;
allko_ids K13770;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583823.1 1 202 evalue:2.1e-104 qcov:100.00 identity:98.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF17932; PF08359; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_24; TetR_C_4; TetR_N;
pfam_target db:Pfam-A.hmm|PF17932.1 evalue:1.8e-11 score:43.5 best_domain_score:42.7 name:TetR_C_24; db:Pfam-A.hmm|PF08359.11 evalue:2.9e-52 score:175.5 best_domain_score:175.1 name:TetR_C_4; db:Pfam-A.hmm|PF00440.23 evalue:6.3e-17 score:60.3 best_domain_score:59.7 name:TetR_N;
sprot_desc Fatty acid metabolism regulator protein;
sprot_id sp|P94548|FADR_BACSU;
sprot_target db:uniprot_sprot|sp|P94548|FADR_BACSU 3 193 evalue:9.6e-56 qcov:94.60 identity:56.50;
85558 86340 CDS
ID metaerg.pl|08663
allec_ids 4.2.1.17;
allgo_ids GO:0003824; GO:0004300; GO:0016853; GO:0006635;
allko_ids K07515; K01825; K10527; K07511; K07514; K13816; K15016; K13767; K00022; K01692; K01715; K01782; K07516;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583824.1 1 260 evalue:1.2e-125 qcov:100.00 identity:88.10;
kegg_pathway_id 00903; 00062; 01040; 00410; 00592; 00071; 00650; 00640; 00280; 00281; 00310; 00380; 00632; 00930;
kegg_pathway_name Limonene and pinene degradation; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids; beta-Alanine metabolism; alpha-Linolenic acid metabolism; Fatty acid metabolism; Butanoate metabolism; Propanoate metabolism; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; Tryptophan metabolism; Benzoate degradation via CoA ligation; Caprolactam degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
metacyc_pathway_id PWY-5136; ILEUDEG-PWY; FAO-PWY; PWY-5138; P3-PWY; VALDEG-PWY; PWY-561; PWY-6435;
metacyc_pathway_name fatty acid β-oxidation II (peroxisome);; L-isoleucine degradation I;; fatty acid β-oxidation I;; unsaturated, even numbered fatty acid β-oxidation;; gallate degradation III (anaerobic);; L-valine degradation I;; superpathway of glyoxylate cycle and fatty acid degradation;; 4-hydroxybenzoate biosynthesis III (plants);;
metacyc_pathway_type Fatty-Acid-Degradation;; ISOLEUCINE-DEG;; Fatty-Acid-Degradation;; Fatty-Acid-Degradation;; GALLATE-DEG;; VALINE-DEG;; Energy-Metabolism; Super-Pathways;; 4-Hydroxybenzoate-Biosynthesis;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:2.4e-66 score:222.8 best_domain_score:222.7 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:5.6e-35 score:120.6 best_domain_score:119.6 name:ECH_2;
sprot_desc Probable enoyl-CoA hydratase;
sprot_id sp|P94549|FADB_BACSU;
sprot_target db:uniprot_sprot|sp|P94549|FADB_BACSU 7 258 evalue:4.7e-63 qcov:96.90 identity:50.80;
86415 87185 CDS
ID metaerg.pl|08664
allgo_ids GO:0009055;
allko_ids K03521;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583825.1 1 256 evalue:9.3e-134 qcov:100.00 identity:96.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF01012;
pfam_desc Electron transfer flavoprotein domain;
pfam_id ETF;
pfam_target db:Pfam-A.hmm|PF01012.21 evalue:1.1e-48 score:164.8 best_domain_score:164.4 name:ETF;
sprot_desc Electron transfer flavoprotein subunit beta;
sprot_id sp|P94550|ETFB_BACSU;
sprot_target db:uniprot_sprot|sp|P94550|ETFB_BACSU 1 256 evalue:1.3e-86 qcov:100.00 identity:65.00;
87215 88057 CDS
ID metaerg.pl|08665
allgo_ids GO:0009055; GO:0050660;
allko_ids K03522;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583826.1 1 281 evalue:1.8e-146 qcov:100.00 identity:94.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0828821; 105.886; 0.289837; 7.76332; 97.7496;
pfam_acc PF01012; PF00766;
pfam_desc Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain;
pfam_id ETF; ETF_alpha;
pfam_target db:Pfam-A.hmm|PF01012.21 evalue:2.3e-43 score:147.4 best_domain_score:147.0 name:ETF; db:Pfam-A.hmm|PF00766.19 evalue:8.7e-35 score:117.9 best_domain_score:117.2 name:ETF_alpha;
sprot_desc Electron transfer flavoprotein subunit alpha;
sprot_id sp|P94551|ETFA_BACSU;
sprot_target db:uniprot_sprot|sp|P94551|ETFA_BACSU 3 281 evalue:1.6e-96 qcov:99.30 identity:60.30;
>Feature NODE_60_length_87605_cov_24.2252
3 353 CDS
ID metaerg.pl|08666
allec_ids 7.1.1.7;
allgo_ids GO:0016020; GO:0055114; GO:0016021; GO:0005886; GO:0046872; GO:0006119;
allko_ids K00426;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092888866.1 1 116 evalue:1.1e-57 qcov:100.00 identity:96.60;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF02322;
pfam_desc Cytochrome bd terminal oxidase subunit II;
pfam_id Cyt_bd_oxida_II;
pfam_target db:Pfam-A.hmm|PF02322.15 evalue:3.8e-23 score:81.5 best_domain_score:81.3 name:Cyt_bd_oxida_II;
sprot_desc Cytochrome bd-I ubiquinol oxidase subunit 2;
sprot_id sp|P0ABK4|CYDB_ECO57;
sprot_target db:uniprot_sprot|sp|P0ABK4|CYDB_ECO57 8 109 evalue:2.3e-06 qcov:87.90 identity:29.60;
tm_num 3;
3 353 transmembrane_helix
ID metaerg.pl|08667
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology o15-83i117-185o243-311i;
479 913 CDS
ID metaerg.pl|08668
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092888860.1 1 144 evalue:8.6e-60 qcov:100.00 identity:87.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
sp YES;
479 538 signal_peptide
ID metaerg.pl|08669
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
1304 2158 CDS
ID metaerg.pl|08670
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter;s__Pseudorhodobacter aquimaris;
genomedb_acc GCF_001202025.1;
genomedb_target db:genomedb|GCF_001202025.1|WP_050525725.1 12 278 evalue:3.2e-50 qcov:94.00 identity:44.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
tm_num 4;
1304 2158 transmembrane_helix
ID metaerg.pl|08671
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i1361-1429o1472-1540i1622-1690o2033-2101i;
2702 3025 CDS
ID metaerg.pl|08672
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479447.1 2 91 evalue:5.4e-19 qcov:84.10 identity:56.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
3012 4319 CDS
ID metaerg.pl|08673
allec_ids 2.7.8.-;
allgo_ids GO:0003824; GO:0016021; GO:0005886; GO:0008808; GO:0032049; GO:0008654;
allko_ids K06131;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479446.1 15 435 evalue:2.8e-178 qcov:96.80 identity:73.30;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id TEICHOICACID-PWY; PHOSLIPSYN-PWY; PWY-6385; PHOSLIPSYN2-PWY; PWY4FS-4; PWY-5668;
metacyc_pathway_name poly(glycerol phosphate) wall teichoic acid biosynthesis;; superpathway of phospholipid biosynthesis I (bacteria);; peptidoglycan biosynthesis III (mycobacteria);; superpathway of phospholipid biosynthesis II (plants);; phosphatidylcholine biosynthesis IV;; cardiolipin biosynthesis I;;
metacyc_pathway_type Teichoic-Acids-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylcholineBiosynthesis;; Cardiolipin-Biosynthesis;;
pfam_acc PF00614; PF13091;
pfam_desc Phospholipase D Active site motif; PLD-like domain;
pfam_id PLDc; PLDc_2;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:4.5e-11 score:41.7 best_domain_score:23.8 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:6.7e-42 score:141.8 best_domain_score:99.2 name:PLDc_2;
sprot_desc Cardiolipin synthase 2;
sprot_id sp|Q81TR2|CLS2_BACAN;
sprot_target db:uniprot_sprot|sp|Q81TR2|CLS2_BACAN 80 422 evalue:7.6e-58 qcov:78.90 identity:36.00;
tigrfam_acc TIGR04265;
tigrfam_desc cardiolipin synthase;
tigrfam_name bac_cardiolipin;
tigrfam_target db:TIGRFAMs.hmm|TIGR04265 evalue:5.2e-93 score:311.7 best_domain_score:311.3 name:TIGR04265;
tm_num 1;
3012 4319 transmembrane_helix
ID metaerg.pl|08674
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i3048-3116o;
5161 4460 CDS
ID metaerg.pl|08675
allgo_ids GO:0000160; GO:0003677; GO:0006355;
allko_ids K11231; K02491; K07708; K07677; K07704; K01937; K08282; K00760; K02484; K11356; K11640; K11711; K07642; K07679; K02478; K07648; K07651; K07718; K07778; K11354; K07768; K07711; K08884; K07641; K07646; K07639; K08475; K01120; K07673; K07652; K07654; K07682; K03407; K07637; K07647; K07675; K07717; K12767; K11383; K13761; K02486; K04757; K10125; K11357; K07709; K07644; K01769; K07650; K06379; K07676; K10681; K11527; K10715; K07678; K02482; K02480; K07653; K07638; K07636; K02489; K07716; K07710; K01768; K02668; K03388; K08479; K10916; K07659;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087210935.1 1 233 evalue:1.7e-121 qcov:100.00 identity:95.30;
kegg_pathway_id 04011; 02020; 03090; 00790; 00983; 05111; 00230; 00240;
kegg_pathway_name MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Folate biosynthesis; Drug metabolism - other enzymes; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:2.8e-27 score:94.3 best_domain_score:93.7 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:4.1e-22 score:77.3 best_domain_score:76.0 name:Trans_reg_C;
sprot_desc hypothetical protein;
sprot_id sp|P31079|PETR_RHOCB;
sprot_target db:uniprot_sprot|sp|P31079|PETR_RHOCB 1 233 evalue:6.7e-85 qcov:100.00 identity:68.90;
5664 5158 CDS
ID metaerg.pl|08676
allgo_ids GO:0003700; GO:0006355; GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_026352442.1 1 168 evalue:2.1e-81 qcov:100.00 identity:92.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF13463; PF01047; PF12802;
pfam_desc Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id HTH_27; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF13463.6 evalue:1.8e-06 score:27.6 best_domain_score:26.9 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:1.8e-06 score:27.0 best_domain_score:26.3 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:1.3e-11 score:43.4 best_domain_score:42.4 name:MarR_2;
sprot_desc HTH-type transcriptional regulator PetP;
sprot_id sp|P31078|PETP_RHOCB;
sprot_target db:uniprot_sprot|sp|P31078|PETP_RHOCB 1 165 evalue:8.5e-66 qcov:98.20 identity:77.60;
5808 6677 CDS
ID metaerg.pl|08677
allec_ids 2.6.1.42;
allgo_ids GO:0003824; GO:0052656; GO:0052654; GO:0052655; GO:0009097; GO:0009098; GO:0009099;
allko_ids K00826;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087210939.1 1 289 evalue:6.3e-163 qcov:100.00 identity:96.90;
kegg_pathway_id 00770; 00280; 00290;
kegg_pathway_name Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id PWY-5057; PWY0-1061; LEUSYN-PWY; VALSYN-PWY; PWY-5076; PWY-5078; LEU-DEG2-PWY; BRANCHED-CHAIN-AA-SYN-PWY; THREOCAT-PWY; PWY-5108; PWY-3001; ALANINE-VALINESYN-PWY; PWY-5101; VALDEG-PWY; ILEUDEG-PWY; ILEUSYN-PWY; PWY-5104; PWY-5103;
metacyc_pathway_name L-valine degradation II;; superpathway of L-alanine biosynthesis;; L-leucine biosynthesis;; L-valine biosynthesis;; L-leucine degradation III;; L-isoleucine degradation II;; L-leucine degradation I;; superpathway of branched chain amino acid biosynthesis;; superpathway of L-threonine metabolism;; L-isoleucine biosynthesis V;; superpathway of L-isoleucine biosynthesis I;; L-alanine biosynthesis I;; L-isoleucine biosynthesis II;; L-valine degradation I;; L-isoleucine degradation I;; L-isoleucine biosynthesis I (from threonine);; L-isoleucine biosynthesis IV;; L-isoleucine biosynthesis III;;
metacyc_pathway_type VALINE-DEG;; ALANINE-SYN; Super-Pathways;; LEUCINE-SYN;; VALINE-BIOSYNTHESIS;; LEUCINE-DEG;; ISOLEUCINE-DEG;; LEUCINE-DEG;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; ALANINE-SYN;; ISOLEUCINE-SYN;; VALINE-DEG;; ISOLEUCINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;;
pfam_acc PF01063;
pfam_desc Amino-transferase class IV;
pfam_id Aminotran_4;
pfam_target db:Pfam-A.hmm|PF01063.19 evalue:4.4e-42 score:143.7 best_domain_score:143.5 name:Aminotran_4;
sprot_desc Probable branched-chain-amino-acid aminotransferase;
sprot_id sp|Q4ULR3|ILVE_RICFE;
sprot_target db:uniprot_sprot|sp|Q4ULR3|ILVE_RICFE 12 288 evalue:5.4e-60 qcov:95.80 identity:40.90;
tigrfam_acc TIGR01122;
tigrfam_desc branched-chain amino acid aminotransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ilvE_I;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01122 evalue:1.2e-83 score:279.9 best_domain_score:279.7 name:TIGR01122;
6926 6729 CDS
ID metaerg.pl|08678
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_110570965.1 1 65 evalue:2.4e-17 qcov:100.00 identity:70.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
7918 6998 CDS
ID metaerg.pl|08679
allgo_ids GO:0016020; GO:0016021; GO:0005789; GO:0005886; GO:1990034; GO:0051480;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955471.1 1 306 evalue:1.1e-149 qcov:100.00 identity:92.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:9.3e-22 score:76.9 best_domain_score:42.9 name:EamA;
sp YES;
sprot_desc Solute carrier family 35 member G1;
sprot_id sp|Q8BY79|S35G1_MOUSE;
sprot_target db:uniprot_sprot|sp|Q8BY79|S35G1_MOUSE 3 277 evalue:3.9e-08 qcov:89.90 identity:27.00;
tm_num 10;
6998 7075 signal_peptide
ID metaerg.pl|08680
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
7918 6998 transmembrane_helix
ID metaerg.pl|08681
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i7016-7069o7097-7165i7202-7270o7283-7342i7361-7429o7457-7516i7550-7618o7631-7699i7712-7780o7793-7852i;
8035 9060 CDS
ID metaerg.pl|08682
allec_ids 1.14.19.-;
allgo_ids GO:0006629; GO:0016021; GO:0016720; GO:0004768; GO:0040002; GO:0030497; GO:0045087; GO:0000003; GO:0006636;
allko_ids K10257;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_110570964.1 11 339 evalue:1.4e-182 qcov:96.50 identity:93.90;
kegg_pathway_id 01040;
kegg_pathway_name Biosynthesis of unsaturated fatty acids;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id PWY-5997; PWY-5998; PWY-5353;
metacyc_pathway_name α-linolenate biosynthesis I (plants and red algae);; γ-linolenate biosynthesis I (plants);; arachidonate biosynthesis I (6-desaturase, lower eukaryotes);;
metacyc_pathway_type Alpha-Linolenate-Biosynthesis;; Gamma-linolenate-Biosynthesis;; Arachidonate-Biosynthesis;;
pfam_acc PF00487;
pfam_desc Fatty acid desaturase;
pfam_id FA_desaturase;
pfam_target db:Pfam-A.hmm|PF00487.24 evalue:2.3e-36 score:125.2 best_domain_score:125.2 name:FA_desaturase;
sprot_desc Delta(12) fatty acid desaturase fat-2;
sprot_id sp|G5EGA5|FAT2_CAEEL;
sprot_target db:uniprot_sprot|sp|G5EGA5|FAT2_CAEEL 51 295 evalue:2.1e-07 qcov:71.80 identity:22.70;
tm_num 4;
8035 9060 transmembrane_helix
ID metaerg.pl|08683
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i8125-8193o8206-8265i8593-8661o8671-8739i;
10217 9063 CDS
ID metaerg.pl|08684
allec_ids 1.1.5.-;
allgo_ids GO:0009279; GO:0030288; GO:0005509; GO:0016901; GO:0070968;
allko_ids K21430;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955469.1 1 384 evalue:5.2e-205 qcov:100.00 identity:88.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF07995;
pfam_desc Glucose / Sorbosone dehydrogenase;
pfam_id GSDH;
pfam_target db:Pfam-A.hmm|PF07995.11 evalue:2.4e-111 score:371.5 best_domain_score:371.3 name:GSDH;
sp YES;
sprot_desc Aldose sugar dehydrogenase YliI;
sprot_id sp|P75804|YLII_ECOLI;
sprot_target db:uniprot_sprot|sp|P75804|YLII_ECOLI 39 384 evalue:4.2e-60 qcov:90.10 identity:39.30;
9063 9110 signal_peptide
ID metaerg.pl|08685
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
11248 10214 CDS
ID metaerg.pl|08686
allec_ids 1.17.99.6; 1.-.-.-;
allgo_ids GO:0005737; GO:0051539; GO:0052693; GO:0046872; GO:0008616; GO:0008033;
allko_ids K00123; K00443; K00170; K00176; K03388; K00390; K00265; K00124; K00205; K00171; K00441; K00226; K18979;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955468.1 1 340 evalue:2.9e-183 qcov:98.80 identity:89.40;
kegg_pathway_id 00240; 00020; 00010; 00920; 00720; 00790; 00680; 00640; 00650; 00630; 00910; 00620; 00251; 00633;
kegg_pathway_name Pyrimidine metabolism; Citrate cycle (TCA cycle); Glycolysis / Gluconeogenesis; Sulfur metabolism; Reductive carboxylate cycle (CO2 fixation); Folate biosynthesis; Methane metabolism; Propanoate metabolism; Butanoate metabolism; Glyoxylate and dicarboxylate metabolism; Nitrogen metabolism; Pyruvate metabolism; Glutamate metabolism; Trinitrotoluene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id PWY-5469; PWY-5987; PWY-5479; PWY-6113; PWYG-321; PWY-4302; PWY-5271; PWY-2821; PWY-5826;
metacyc_pathway_name sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;;
metacyc_pathway_type LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;;
pfam_acc PF08331; PF13484; PF12838;
pfam_desc Domain of unknown function (DUF1730); 4Fe-4S double cluster binding domain; 4Fe-4S dicluster domain;
pfam_id DUF1730; Fer4_16; Fer4_7;
pfam_target db:Pfam-A.hmm|PF08331.10 evalue:1.7e-23 score:81.6 best_domain_score:80.9 name:DUF1730; db:Pfam-A.hmm|PF13484.6 evalue:2.1e-19 score:69.5 best_domain_score:68.8 name:Fer4_16; db:Pfam-A.hmm|PF12838.7 evalue:2.2e-07 score:30.6 best_domain_score:29.5 name:Fer4_7;
sprot_desc Epoxyqueuosine reductase;
sprot_id sp|F7ZDR3|QUEG_ROSLO;
sprot_target db:uniprot_sprot|sp|F7ZDR3|QUEG_ROSLO 1 339 evalue:3.4e-146 qcov:98.50 identity:70.10;
tigrfam_acc TIGR00276;
tigrfam_desc epoxyqueuosine reductase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00276;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00276 evalue:1.6e-136 score:453.9 best_domain_score:453.7 name:TIGR00276;
12004 11339 CDS
ID metaerg.pl|08687
allgo_ids GO:0005515;
allko_ids K04097; K00799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955467.1 1 221 evalue:9.9e-124 qcov:100.00 identity:94.60;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00043; PF14497; PF02798; PF13409; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_3; GST_N; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:5.2e-05 score:22.6 best_domain_score:22.0 name:GST_C; db:Pfam-A.hmm|PF14497.6 evalue:4.8e-07 score:29.1 best_domain_score:28.6 name:GST_C_3; db:Pfam-A.hmm|PF02798.20 evalue:1.8e-11 score:43.5 best_domain_score:42.5 name:GST_N; db:Pfam-A.hmm|PF13409.6 evalue:4.9e-14 score:51.6 best_domain_score:50.6 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:5.1e-22 score:77.3 best_domain_score:76.4 name:GST_N_3;
12820 12068 CDS
ID metaerg.pl|08688
allec_ids 2.4.1.129; 2.4.2.-;
allgo_ids GO:0016021; GO:0009274; GO:0005886; GO:0008955; GO:0016763; GO:0071555; GO:0009252; GO:0008360;
allko_ids K05366; K03814;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955466.1 1 249 evalue:3.1e-118 qcov:99.60 identity:85.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id PWY-5800; PWY-6470; PEPTIDOGLYCANSYN-PWY; PWY-5265; HISTSYN-PWY; PWY-6385; PWY-5381; PRPP-PWY; PWY-6471;
metacyc_pathway_name xylan biosynthesis;; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis II (staphylococci);; L-histidine biosynthesis;; peptidoglycan biosynthesis III (mycobacteria);; pyridine nucleotide cycling (plants);; superpathway of histidine, purine, and pyrimidine biosynthesis;; peptidoglycan biosynthesis IV (Enterococcus faecium);;
metacyc_pathway_type SECONDARY-CELL-WALL;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; HISTIDINE-SYN;; Peptidoglycan-Biosynthesis; Super-Pathways;; NAD-Metabolism;; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00912;
pfam_desc Transglycosylase;
pfam_id Transgly;
pfam_target db:Pfam-A.hmm|PF00912.22 evalue:2.9e-43 score:146.6 best_domain_score:146.1 name:Transgly;
sprot_desc Biosynthetic peptidoglycan transglycosylase;
sprot_id sp|Q28VR9|MTGA_JANSC;
sprot_target db:uniprot_sprot|sp|Q28VR9|MTGA_JANSC 19 248 evalue:3.6e-68 qcov:92.00 identity:55.40;
tigrfam_acc TIGR02070;
tigrfam_desc monofunctional biosynthetic peptidoglycan transglycosylase;
tigrfam_mainrole Cell envelope;
tigrfam_name mono_pep_trsgly;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR02070 evalue:5.5e-63 score:211.6 best_domain_score:211.2 name:TIGR02070;
tm_num 1;
12820 12068 transmembrane_helix
ID metaerg.pl|08689
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i12176-12244o;
17434 12902 CDS
ID metaerg.pl|08690
allec_ids 1.4.1.13;
allgo_ids GO:0006537; GO:0015930; GO:0016638; GO:0055114; GO:0051538; GO:0004355; GO:0046872; GO:0006541; GO:0097054;
allko_ids K00284; K00265; K00264; K00202;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_040483266.1 1 1510 evalue:0.0e+00 qcov:100.00 identity:95.80;
kegg_pathway_id 00251; 00910; 00790;
kegg_pathway_name Glutamate metabolism; Nitrogen metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id GLUTAMINEFUM-PWY; PWY-5505; GLUTSYN-PWY; AMMASSIM-PWY;
metacyc_pathway_name L-glutamine degradation II;; L-glutamate and L-glutamine biosynthesis;; L-glutamate biosynthesis I;; ammonia assimilation cycle III;;
metacyc_pathway_type GLUTAMINE-DEG;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;; GLUTAMATE-SYN;; Ammonia-Assimilation; Super-Pathways;;
pfam_acc PF00310; PF01645; PF04898; PF01493;
pfam_desc Glutamine amidotransferases class-II; Conserved region in glutamate synthase; Glutamate synthase central domain; GXGXG motif;
pfam_id GATase_2; Glu_synthase; Glu_syn_central; GXGXG;
pfam_target db:Pfam-A.hmm|PF00310.21 evalue:5.4e-159 score:528.6 best_domain_score:528.3 name:GATase_2; db:Pfam-A.hmm|PF01645.17 evalue:2.3e-153 score:509.9 best_domain_score:507.2 name:Glu_synthase; db:Pfam-A.hmm|PF04898.14 evalue:5.6e-94 score:314.0 best_domain_score:313.1 name:Glu_syn_central; db:Pfam-A.hmm|PF01493.19 evalue:1.3e-71 score:239.3 best_domain_score:238.5 name:GXGXG;
sprot_desc Glutamate synthase [NADPH] large chain;
sprot_id sp|Q05755|GLTB_AZOBR;
sprot_target db:uniprot_sprot|sp|Q05755|GLTB_AZOBR 6 1505 evalue:0.0e+00 qcov:99.30 identity:66.00;
18131 17421 CDS
ID metaerg.pl|08691
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955464.1 1 236 evalue:1.8e-99 qcov:100.00 identity:75.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
sp YES;
17421 17468 signal_peptide
ID metaerg.pl|08692
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
18802 18128 CDS
ID metaerg.pl|08693
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_110570963.1 3 224 evalue:5.0e-107 qcov:99.10 identity:81.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
sp YES;
18128 18202 signal_peptide
ID metaerg.pl|08694
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
20226 18799 CDS
ID metaerg.pl|08695
allec_ids 1.4.1.13;
allgo_ids GO:0071949; GO:0051539; GO:0004355; GO:0046872; GO:0097054;
allko_ids K00123; K00266; K03388; K00264; K00384;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087210956.1 1 475 evalue:7.2e-265 qcov:100.00 identity:93.70;
kegg_pathway_id 00630; 00240; 00790; 00680; 00251; 00910;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Pyrimidine metabolism; Folate biosynthesis; Methane metabolism; Glutamate metabolism; Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id GLUTAMINEFUM-PWY; GLUTSYN-PWY; AMMASSIM-PWY; PWY-5505;
metacyc_pathway_name L-glutamine degradation II;; L-glutamate biosynthesis I;; ammonia assimilation cycle III;; L-glutamate and L-glutamine biosynthesis;;
metacyc_pathway_type GLUTAMINE-DEG;; GLUTAMATE-SYN;; Ammonia-Assimilation; Super-Pathways;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;;
pfam_acc PF01262; PF01494; PF14691; PF13450; PF00070; PF07992; PF13738;
pfam_desc Alanine dehydrogenase/PNT, C-terminal domain; FAD binding domain; Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id AlaDh_PNT_C; FAD_binding_3; Fer4_20; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF01262.21 evalue:1.5e-05 score:23.6 best_domain_score:12.9 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF01494.19 evalue:1.1e-06 score:27.4 best_domain_score:26.3 name:FAD_binding_3; db:Pfam-A.hmm|PF14691.6 evalue:1.5e-38 score:130.2 best_domain_score:129.7 name:Fer4_20; db:Pfam-A.hmm|PF13450.6 evalue:1.4e-08 score:34.1 best_domain_score:32.5 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:2.6e-11 score:43.2 best_domain_score:23.6 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:6.6e-28 score:97.0 best_domain_score:96.4 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:3e-08 score:32.5 best_domain_score:17.2 name:Pyr_redox_3;
sprot_desc Glutamate synthase [NADPH] small chain;
sprot_id sp|Q05756|GLTD_AZOBR;
sprot_target db:uniprot_sprot|sp|Q05756|GLTD_AZOBR 1 475 evalue:6.8e-185 qcov:100.00 identity:67.20;
tigrfam_acc TIGR01318;
tigrfam_desc glutamate synthase, small subunit;
tigrfam_name gltD_gamma_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR01318 evalue:3.7e-160 score:532.7 best_domain_score:532.4 name:TIGR01318;
20446 21249 CDS
ID metaerg.pl|08696
allec_ids 3.6.1.27;
allgo_ids GO:0016020; GO:0016311; GO:0050380; GO:0016021; GO:0005886; GO:0071555; GO:0009252; GO:0008360; GO:0046677;
allko_ids K06153;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955461.1 1 266 evalue:2.8e-112 qcov:99.60 identity:85.30;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF02673;
pfam_desc Bacitracin resistance protein BacA;
pfam_id BacA;
pfam_target db:Pfam-A.hmm|PF02673.18 evalue:5.3e-70 score:235.3 best_domain_score:235.1 name:BacA;
sprot_desc Undecaprenyl-diphosphatase;
sprot_id sp|Q16DZ2|UPPP_ROSDO;
sprot_target db:uniprot_sprot|sp|Q16DZ2|UPPP_ROSDO 1 267 evalue:3.1e-86 qcov:100.00 identity:64.00;
tm_num 7;
20446 21249 transmembrane_helix
ID metaerg.pl|08697
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i20464-20532o20560-20628i20689-20754o20782-20841i21007-21075o21103-21156i21175-21243o;
22226 21246 CDS
ID metaerg.pl|08698
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0005759; GO:0005747; GO:0003824; GO:0050662; GO:0007623; GO:0032981;
allko_ids K00329; K03953; K00356;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087210962.1 1 325 evalue:5.0e-156 qcov:99.70 identity:85.80;
kegg_pathway_id 00130; 05012; 00190;
kegg_pathway_name Ubiquinone biosynthesis; Parkinson's disease; Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF01073; PF01370; PF13460; PF07993; PF05368; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; NAD(P)H-binding ; Male sterility protein; NmrA-like family; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; NAD_binding_10; NAD_binding_4; NmrA; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:7.7e-17 score:60.4 best_domain_score:39.9 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:4.1e-14 score:51.9 best_domain_score:49.8 name:Epimerase; db:Pfam-A.hmm|PF13460.6 evalue:1.4e-14 score:53.7 best_domain_score:53.1 name:NAD_binding_10; db:Pfam-A.hmm|PF07993.12 evalue:3.2e-06 score:25.7 best_domain_score:11.8 name:NAD_binding_4; db:Pfam-A.hmm|PF05368.13 evalue:2.8e-08 score:32.8 best_domain_score:32.2 name:NmrA; db:Pfam-A.hmm|PF04321.17 evalue:1.3e-14 score:53.3 best_domain_score:48.4 name:RmlD_sub_bind;
sprot_desc NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial;
sprot_id sp|P0CB81|NDUA9_PONAB;
sprot_target db:uniprot_sprot|sp|P0CB81|NDUA9_PONAB 4 309 evalue:5.0e-38 qcov:93.90 identity:33.30;
22389 22474 tRNA
ID metaerg.pl|08699
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
name tRNA_Ser_cag;
24042 22681 CDS
ID metaerg.pl|08700
allec_ids 7.1.2.2; 3.6.3.14;
allgo_ids GO:0005524; GO:0009288; GO:0005737; GO:0030257; GO:0016887; GO:0006754; GO:0044780; GO:0006811; GO:0030254;
allko_ids K02412;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955551.1 1 453 evalue:2.3e-212 qcov:100.00 identity:83.40;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id DENOVOPURINE2-PWY; PRPP-PWY; PWY-6126;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00006; PF18269;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; T3SS EscN ATPase C-terminal domain;
pfam_id ATP-synt_ab; T3SS_ATPase_C;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:2.4e-63 score:212.9 best_domain_score:212.4 name:ATP-synt_ab; db:Pfam-A.hmm|PF18269.1 evalue:4.7e-12 score:44.8 best_domain_score:44.1 name:T3SS_ATPase_C;
sprot_desc Flagellum-specific ATP synthase;
sprot_id sp|O34171|FLII_AGRFC;
sprot_target db:uniprot_sprot|sp|O34171|FLII_AGRFC 17 439 evalue:8.4e-84 qcov:93.40 identity:42.10;
tigrfam_acc TIGR01026;
tigrfam_desc ATPase, FliI/YscN family;
tigrfam_mainrole Energy metabolism;
tigrfam_name fliI_yscN;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01026 evalue:5e-122 score:407.0 best_domain_score:406.7 name:TIGR01026;
24128 24514 CDS
ID metaerg.pl|08701
allgo_ids GO:0071973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955550.1 1 128 evalue:5.9e-44 qcov:100.00 identity:76.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00460;
pfam_desc Flagella basal body rod protein;
pfam_id Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF00460.20 evalue:7.2e-06 score:25.1 best_domain_score:24.1 name:Flg_bb_rod;
24520 24912 CDS
ID metaerg.pl|08702
allgo_ids GO:0071973; GO:0009425; GO:0030694;
allko_ids K02388;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955549.1 1 130 evalue:3.0e-56 qcov:100.00 identity:85.40;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF06429; PF00460;
pfam_desc Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein;
pfam_id Flg_bbr_C; Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF06429.13 evalue:3.8e-10 score:39.0 best_domain_score:38.0 name:Flg_bbr_C; db:Pfam-A.hmm|PF00460.20 evalue:7.4e-08 score:31.4 best_domain_score:30.5 name:Flg_bb_rod;
sprot_desc Flagellar basal-body rod protein FlgC;
sprot_id sp|Q44336|FLGC_AGRFC;
sprot_target db:uniprot_sprot|sp|Q44336|FLGC_AGRFC 1 129 evalue:4.9e-21 qcov:99.20 identity:44.10;
24924 25205 CDS
ID metaerg.pl|08703
allgo_ids GO:0003774; GO:0005198; GO:0009288; GO:0071973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955548.1 1 93 evalue:2.9e-32 qcov:100.00 identity:87.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF02049;
pfam_desc Flagellar hook-basal body complex protein FliE;
pfam_id FliE;
pfam_target db:Pfam-A.hmm|PF02049.18 evalue:3.6e-17 score:61.5 best_domain_score:61.3 name:FliE;
25202 25471 CDS
ID metaerg.pl|08704
allgo_ids GO:0009306; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955547.1 2 89 evalue:3.1e-36 qcov:98.90 identity:95.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF01313;
pfam_desc Bacterial export proteins, family 3;
pfam_id Bac_export_3;
pfam_target db:Pfam-A.hmm|PF01313.19 evalue:8.4e-25 score:85.7 best_domain_score:85.5 name:Bac_export_3;
tm_num 2;
25202 25471 transmembrane_helix
ID metaerg.pl|08705
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology o25244-25312i25346-25414o;
25474 26190 CDS
ID metaerg.pl|08706
allgo_ids GO:0071973; GO:0030694;
allko_ids K02391;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955546.1 1 238 evalue:1.6e-116 qcov:100.00 identity:89.90;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF06429; PF00460;
pfam_desc Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein;
pfam_id Flg_bbr_C; Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF06429.13 evalue:2.1e-13 score:49.4 best_domain_score:48.0 name:Flg_bbr_C; db:Pfam-A.hmm|PF00460.20 evalue:2.2e-07 score:29.9 best_domain_score:28.9 name:Flg_bb_rod;
sprot_desc Flagellar basal-body rod protein FlgF;
sprot_id sp|Q06171|FLGF_CAUVC;
sprot_target db:uniprot_sprot|sp|Q06171|FLGF_CAUVC 1 234 evalue:5.3e-37 qcov:98.30 identity:38.60;
tigrfam_acc TIGR02490; TIGR03506;
tigrfam_desc flagellar basal-body rod protein FlgF; flagellar hook-basal body protein;
tigrfam_mainrole Cellular processes;
tigrfam_name flgF; FlgEFG_subfam;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR02490 evalue:6.4e-56 score:188.5 best_domain_score:188.3 name:TIGR02490; db:TIGRFAMs.hmm|TIGR03506 evalue:1.4e-54 score:185.3 best_domain_score:121.7 name:TIGR03506;
26203 26988 CDS
ID metaerg.pl|08707
allgo_ids GO:0071973; GO:0009426;
allko_ids K02392;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955545.1 1 261 evalue:2.9e-138 qcov:100.00 identity:97.70;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF06429; PF00460;
pfam_desc Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein;
pfam_id Flg_bbr_C; Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF06429.13 evalue:3.6e-23 score:80.7 best_domain_score:78.6 name:Flg_bbr_C; db:Pfam-A.hmm|PF00460.20 evalue:2.4e-11 score:42.5 best_domain_score:42.1 name:Flg_bb_rod;
sprot_desc Flagellar basal-body rod protein FlgG;
sprot_id sp|Q06172|FLGG_CAUVC;
sprot_target db:uniprot_sprot|sp|Q06172|FLGG_CAUVC 1 261 evalue:1.2e-69 qcov:100.00 identity:54.40;
tigrfam_acc TIGR02488; TIGR03506;
tigrfam_desc flagellar basal-body rod protein FlgG; flagellar hook-basal body protein;
tigrfam_mainrole Cellular processes;
tigrfam_name flgG_G_neg; FlgEFG_subfam;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR02488 evalue:1.5e-97 score:325.3 best_domain_score:325.2 name:TIGR02488; db:TIGRFAMs.hmm|TIGR03506 evalue:4.5e-71 score:239.5 best_domain_score:140.3 name:TIGR03506;
26985 27401 CDS
ID metaerg.pl|08708
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955544.1 4 138 evalue:1.7e-52 qcov:97.80 identity:78.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF13144; PF08666;
pfam_desc Chaperone for flagella basal body P-ring formation; SAF domain;
pfam_id ChapFlgA; SAF;
pfam_target db:Pfam-A.hmm|PF13144.6 evalue:1.7e-24 score:85.5 best_domain_score:85.2 name:ChapFlgA; db:Pfam-A.hmm|PF08666.12 evalue:7.2e-06 score:25.8 best_domain_score:24.9 name:SAF;
sp YES;
tigrfam_acc TIGR03170;
tigrfam_desc flagella basal body P-ring formation protein FlgA;
tigrfam_mainrole Cellular processes;
tigrfam_name flgA_cterm;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR03170 evalue:5.2e-29 score:100.1 best_domain_score:99.9 name:TIGR03170;
26985 27035 signal_peptide
ID metaerg.pl|08709
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
27416 28138 CDS
ID metaerg.pl|08710
allgo_ids GO:0003774; GO:0009427; GO:0071973; GO:0009279;
allko_ids K02393;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_026352452.1 1 240 evalue:1.0e-110 qcov:100.00 identity:84.20;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF02107;
pfam_desc Flagellar L-ring protein;
pfam_id FlgH;
pfam_target db:Pfam-A.hmm|PF02107.16 evalue:1.2e-51 score:173.9 best_domain_score:173.7 name:FlgH;
sp YES;
sprot_desc Flagellar L-ring protein;
sprot_id sp|Q5LWX7|FLGH_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LWX7|FLGH_RUEPO 11 240 evalue:7.4e-71 qcov:95.80 identity:60.60;
27416 27454 lipoprotein_signal_peptide
ID metaerg.pl|08711
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
28148 28648 CDS
ID metaerg.pl|08712
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955542.1 1 166 evalue:3.0e-64 qcov:100.00 identity:77.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
sp YES;
tm_num 1;
28148 28213 signal_peptide
ID metaerg.pl|08713
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
28148 28648 transmembrane_helix
ID metaerg.pl|08714
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i28154-28222o;
29034 28645 CDS
ID metaerg.pl|08715
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955541.1 1 120 evalue:2.2e-30 qcov:93.00 identity:62.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
30113 29034 CDS
ID metaerg.pl|08716
allgo_ids GO:0009306; GO:0016020; GO:0016021; GO:0005886; GO:0044780;
allko_ids K02401;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955540.1 1 359 evalue:4.0e-151 qcov:100.00 identity:77.70;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF01312;
pfam_desc FlhB HrpN YscU SpaS Family;
pfam_id Bac_export_2;
pfam_target db:Pfam-A.hmm|PF01312.19 evalue:2.5e-108 score:361.4 best_domain_score:361.3 name:Bac_export_2;
sprot_desc Flagellar biosynthetic protein FlhB;
sprot_id sp|P76299|FLHB_ECOLI;
sprot_target db:uniprot_sprot|sp|P76299|FLHB_ECOLI 4 355 evalue:6.5e-39 qcov:98.10 identity:35.10;
tm_num 5;
30113 29034 transmembrane_helix
ID metaerg.pl|08717
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology o29160-29228i29247-29315o29328-29396i29499-29567o29595-29663i;
30805 30110 CDS
ID metaerg.pl|08718
allgo_ids GO:0006605; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955539.1 1 231 evalue:2.3e-99 qcov:100.00 identity:86.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF01311;
pfam_desc Bacterial export proteins, family 1;
pfam_id Bac_export_1;
pfam_target db:Pfam-A.hmm|PF01311.20 evalue:1.6e-37 score:128.5 best_domain_score:128.3 name:Bac_export_1;
tm_num 6;
30805 30110 transmembrane_helix
ID metaerg.pl|08719
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i30146-30205o30233-30301i30305-30373o30401-30460i30578-30646o30689-30757i;
32979 30889 CDS
ID metaerg.pl|08720
allgo_ids GO:0009306; GO:0016020; GO:0016021; GO:0005886; GO:0044780;
allko_ids K02400;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_043699814.1 1 696 evalue:0.0e+00 qcov:100.00 identity:92.50;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00771;
pfam_desc FHIPEP family;
pfam_id FHIPEP;
pfam_target db:Pfam-A.hmm|PF00771.20 evalue:1.7e-214 score:713.3 best_domain_score:713.1 name:FHIPEP;
sprot_desc Flagellar biosynthesis protein FlhA;
sprot_id sp|Q03845|FLHA_CAUVC;
sprot_target db:uniprot_sprot|sp|Q03845|FLHA_CAUVC 16 694 evalue:1.3e-120 qcov:97.60 identity:39.00;
tigrfam_acc TIGR01398;
tigrfam_desc flagellar biosynthesis protein FlhA;
tigrfam_mainrole Cellular processes;
tigrfam_name FlhA;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR01398 evalue:2e-240 score:798.8 best_domain_score:798.6 name:TIGR01398;
tm_num 6;
32979 30889 transmembrane_helix
ID metaerg.pl|08721
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology o30916-30975i30988-31056o31216-31284i31489-31557o31615-31683i31744-31812o;
35338 33134 CDS
ID metaerg.pl|08722
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955537.1 1 731 evalue:1.0e-217 qcov:99.60 identity:57.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
sp YES;
33134 33190 signal_peptide
ID metaerg.pl|08723
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
36204 35335 CDS
ID metaerg.pl|08724
allgo_ids GO:0016021; GO:0005886; GO:0097588; GO:0052143; GO:0006811;
allko_ids K02556;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955536.1 1 289 evalue:3.1e-149 qcov:100.00 identity:93.10;
kegg_pathway_id 02020; 02040;
kegg_pathway_name Two-component system - General; Flagellar assembly;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF01618;
pfam_desc MotA/TolQ/ExbB proton channel family;
pfam_id MotA_ExbB;
pfam_target db:Pfam-A.hmm|PF01618.16 evalue:1e-13 score:50.4 best_domain_score:49.4 name:MotA_ExbB;
sprot_desc Motility protein A;
sprot_id sp|Q44456|MOTA_AGRFC;
sprot_target db:uniprot_sprot|sp|Q44456|MOTA_AGRFC 4 281 evalue:8.6e-50 qcov:96.20 identity:36.90;
tigrfam_acc TIGR03818;
tigrfam_desc flagellar motor stator protein MotA;
tigrfam_name MotA1;
tigrfam_target db:TIGRFAMs.hmm|TIGR03818 evalue:2.7e-107 score:357.3 best_domain_score:357.1 name:TIGR03818;
tm_num 4;
36204 35335 transmembrane_helix
ID metaerg.pl|08725
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i35338-35397o35425-35484i35851-35910o35938-36006i;
36849 36280 CDS
ID metaerg.pl|08726
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955535.1 1 189 evalue:2.3e-65 qcov:100.00 identity:75.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
sp YES;
36280 36378 signal_peptide
ID metaerg.pl|08727
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
37202 36846 CDS
ID metaerg.pl|08728
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955534.1 1 118 evalue:3.5e-43 qcov:100.00 identity:83.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
tm_num 1;
37202 36846 transmembrane_helix
ID metaerg.pl|08729
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology o36855-36914i;
37709 37215 CDS
ID metaerg.pl|08730
allgo_ids GO:0006935; GO:0009425; GO:0071973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955533.1 1 164 evalue:3.8e-56 qcov:100.00 identity:75.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF03748;
pfam_desc Flagellar basal body-associated protein FliL;
pfam_id FliL;
pfam_target db:Pfam-A.hmm|PF03748.14 evalue:1.6e-12 score:47.1 best_domain_score:46.7 name:FliL;
tm_num 2;
37709 37215 transmembrane_helix
ID metaerg.pl|08731
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i37272-37340o37398-37466i;
37829 39412 CDS
ID metaerg.pl|08732
allgo_ids GO:0009431; GO:0016021; GO:0005886; GO:0003774; GO:0071973;
allko_ids K02409;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_043699813.1 1 526 evalue:5.8e-239 qcov:99.80 identity:85.60;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF01514; PF08345;
pfam_desc Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal;
pfam_id YscJ_FliF; YscJ_FliF_C;
pfam_target db:Pfam-A.hmm|PF01514.17 evalue:2.2e-50 score:170.3 best_domain_score:167.8 name:YscJ_FliF; db:Pfam-A.hmm|PF08345.11 evalue:2.8e-32 score:111.3 best_domain_score:111.3 name:YscJ_FliF_C;
sprot_desc Flagellar M-ring protein;
sprot_id sp|O54239|FLIF_RHIME;
sprot_target db:uniprot_sprot|sp|O54239|FLIF_RHIME 18 522 evalue:3.9e-24 qcov:95.80 identity:25.40;
tigrfam_acc TIGR00206;
tigrfam_desc flagellar M-ring protein FliF;
tigrfam_mainrole Cellular processes;
tigrfam_name fliF;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR00206 evalue:2.7e-55 score:187.5 best_domain_score:187.1 name:TIGR00206;
tm_num 2;
37829 39412 transmembrane_helix
ID metaerg.pl|08733
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i37877-37945o39089-39157i;
39412 39972 CDS
ID metaerg.pl|08734
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955531.1 1 186 evalue:2.6e-48 qcov:100.00 identity:54.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
39965 40258 CDS
ID metaerg.pl|08735
allgo_ids GO:0009425; GO:0005886; GO:0003774; GO:0071973; GO:0006935;
allko_ids K02417;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955530.1 1 97 evalue:1.2e-38 qcov:100.00 identity:86.60;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF01052;
pfam_desc Type III flagellar switch regulator (C-ring) FliN C-term;
pfam_id FliMN_C;
pfam_target db:Pfam-A.hmm|PF01052.20 evalue:4.5e-20 score:70.7 best_domain_score:70.5 name:FliMN_C;
sprot_desc Flagellar motor switch protein FliN;
sprot_id sp|Q03593|FLIN_CAUVC;
sprot_target db:uniprot_sprot|sp|Q03593|FLIN_CAUVC 9 95 evalue:3.6e-08 qcov:89.70 identity:32.20;
40239 40988 CDS
ID metaerg.pl|08736
allgo_ids GO:0009306; GO:0016020; GO:0009425; GO:0016021; GO:0005886; GO:0044781; GO:0009405;
allko_ids K02419;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019955529.1 14 249 evalue:6.6e-108 qcov:94.80 identity:91.10;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00813;
pfam_desc FliP family;
pfam_id FliP;
pfam_target db:Pfam-A.hmm|PF00813.20 evalue:3.8e-67 score:225.1 best_domain_score:224.8 name:FliP;
sp YES;
sprot_desc Flagellar biosynthetic protein FliP;
sprot_id sp|Q45980|FLIP_CAUVC;
sprot_target db:uniprot_sprot|sp|Q45980|FLIP_CAUVC 17 248 evalue:2.7e-52 qcov:93.20 identity:50.40;
tigrfam_acc TIGR01103;
tigrfam_desc flagellar biosynthetic protein FliP;
tigrfam_mainrole Cellular processes;
tigrfam_name fliP;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR01103 evalue:4.9e-70 score:234.5 best_domain_score:234.2 name:TIGR01103;
tm_num 5;
40239 40322 signal_peptide
ID metaerg.pl|08737
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
40239 40988 transmembrane_helix
ID metaerg.pl|08738
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i40269-40337o40380-40472i40509-40577o40797-40865i40902-40970o;
42139 41078 CDS
ID metaerg.pl|08739
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0043190; GO:0016887; GO:0022857;
allko_ids K11084; K02017; K02032; K02003; K01997; K05847; K02010; K02052; K02006; K02062; K10239; K02045; K11072; K01996; K02071; K06861; K10191; K10199; K05816; K10235; K11076; K02065; K01995; K02049; K10112; K01998; K10111; K10230; K02000; K10243; K01990; K10195; K02018; K02023; K10000;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicimonas;s__Tropicimonas isoalkanivorans;
genomedb_acc GCF_900112335.1;
genomedb_target db:genomedb|GCF_900112335.1|WP_093358962.1 1 352 evalue:9.8e-142 qcov:99.70 identity:74.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-6166; PWY-6188; PWY-6171; PWY-6135;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; ; ; ; ;
pfam_acc PF13304; PF00005; PF17912; PF03459; PF08402;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; MalK OB fold domain; TOBE domain; TOBE domain;
pfam_id AAA_21; ABC_tran; OB_MalK; TOBE; TOBE_2;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:4.8e-07 score:29.1 best_domain_score:16.6 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:5.4e-32 score:110.4 best_domain_score:109.6 name:ABC_tran; db:Pfam-A.hmm|PF17912.1 evalue:4.7e-07 score:29.8 best_domain_score:27.7 name:OB_MalK; db:Pfam-A.hmm|PF03459.17 evalue:4.3e-09 score:35.8 best_domain_score:34.4 name:TOBE; db:Pfam-A.hmm|PF08402.10 evalue:2.3e-14 score:52.6 best_domain_score:51.5 name:TOBE_2;
sprot_desc Putative ATP-binding protein BruAb2_0487;
sprot_id sp|Q578M5|Y2787_BRUAB;
sprot_target db:uniprot_sprot|sp|Q578M5|Y2787_BRUAB 1 344 evalue:4.8e-95 qcov:97.50 identity:52.30;
42991 42146 CDS
ID metaerg.pl|08740
allgo_ids GO:0016020; GO:0055085; GO:0055052; GO:0005887; GO:0015794; GO:0001407;
allko_ids K10190; K02026; K05815;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicimonas;s__Tropicimonas isoalkanivorans;
genomedb_acc GCF_900112335.1;
genomedb_target db:genomedb|GCF_900112335.1|WP_093358964.1 2 281 evalue:1.4e-127 qcov:99.60 identity:81.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.7e-15 score:56.5 best_domain_score:56.5 name:BPD_transp_1;
sprot_desc sn-glycerol-3-phosphate transport system permease protein UgpE;
sprot_id sp|Q8Z246|UGPE_SALTI;
sprot_target db:uniprot_sprot|sp|Q8Z246|UGPE_SALTI 24 273 evalue:2.7e-24 qcov:89.00 identity:30.60;
tm_num 6;
42991 42146 transmembrane_helix
ID metaerg.pl|08741
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i42179-42247o42383-42451i42476-42544o42572-42640i42701-42769o42872-42940i;
43866 42988 CDS
ID metaerg.pl|08742
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0008643;
allko_ids K02025; K10109;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Maritalea;s__Maritalea myrionectae;
genomedb_acc GCF_000423365.1;
genomedb_target db:genomedb|GCF_000423365.1|WP_027833325.1 1 292 evalue:3.2e-130 qcov:100.00 identity:78.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.1e-12 score:47.3 best_domain_score:47.3 name:BPD_transp_1;
sprot_desc Trehalose/maltose transport system permease protein MalF;
sprot_id sp|O51924|MALF_THELN;
sprot_target db:uniprot_sprot|sp|O51924|MALF_THELN 7 261 evalue:6.3e-24 qcov:87.30 identity:30.00;
tm_num 6;
43866 42988 transmembrane_helix
ID metaerg.pl|08743
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i43012-43080o43204-43272i43291-43359o43450-43518i43606-43674o43777-43845i;
45192 43930 CDS
ID metaerg.pl|08744
allko_ids K02027;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Wenxinia;s__Wenxinia marina;
genomedb_acc GCF_000379485.1;
genomedb_target db:genomedb|GCF_000379485.1|WP_018304186.1 1 420 evalue:4.4e-189 qcov:100.00 identity:77.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF01547; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:1.1e-18 score:67.5 best_domain_score:66.9 name:SBP_bac_1; db:Pfam-A.hmm|PF13416.6 evalue:5.3e-26 score:91.3 best_domain_score:90.8 name:SBP_bac_8;
sp YES;
43930 43998 signal_peptide
ID metaerg.pl|08745
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
46811 45303 CDS
ID metaerg.pl|08746
allec_ids 3.2.1.55;
allgo_ids GO:0046373; GO:0046556; GO:0005737; GO:0031222;
allko_ids K01209;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium sp001426265;
genomedb_acc GCF_001426265.1;
genomedb_target db:genomedb|GCF_001426265.1|WP_056545909.1 1 502 evalue:7.7e-257 qcov:100.00 identity:82.30;
kegg_pathway_id 00520;
kegg_pathway_name Nucleotide sugars metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF06964;
pfam_desc Alpha-L-arabinofuranosidase C-terminal domain;
pfam_id Alpha-L-AF_C;
pfam_target db:Pfam-A.hmm|PF06964.12 evalue:2.5e-42 score:144.1 best_domain_score:143.5 name:Alpha-L-AF_C;
sprot_desc Intracellular exo-alpha-(1->5)-L-arabinofuranosidase;
sprot_id sp|Q9XBQ3|IABF_GEOSE;
sprot_target db:uniprot_sprot|sp|Q9XBQ3|IABF_GEOSE 11 500 evalue:3.6e-160 qcov:97.60 identity:53.70;
47818 46898 CDS
ID metaerg.pl|08747
allgo_ids GO:0003700; GO:0006355;
casgene_acc cd09655_casR_CAS-I; cls001593_casR_CAS-I; COG0640_csa3_CAS-I-A;
casgene_name casR; casR; csa3;
casgene_target db:casgenes.hmm|cd09655_casR_CAS-I evalue:9.8e-08 score:31.0 best_domain_score:30.5 name:casR; db:casgenes.hmm|cls001593_casR_CAS-I evalue:1.2e-07 score:30.3 best_domain_score:29.8 name:casR; db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:1.2e-08 score:34.6 best_domain_score:33.9 name:csa3;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tropicimonas;s__Tropicimonas isoalkanivorans;
genomedb_acc GCF_900112335.1;
genomedb_target db:genomedb|GCF_900112335.1|WP_093358972.1 1 305 evalue:1.7e-134 qcov:99.70 identity:75.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF12840; PF13412; PF01022; PF09339; PF12802; PF01978;
pfam_desc Helix-turn-helix domain; Winged helix-turn-helix DNA-binding; Bacterial regulatory protein, arsR family; IclR helix-turn-helix domain; MarR family; Sugar-specific transcriptional regulator TrmB;
pfam_id HTH_20; HTH_24; HTH_5; HTH_IclR; MarR_2; TrmB;
pfam_target db:Pfam-A.hmm|PF12840.7 evalue:7.5e-11 score:41.2 best_domain_score:40.3 name:HTH_20; db:Pfam-A.hmm|PF13412.6 evalue:5.5e-06 score:25.1 best_domain_score:24.3 name:HTH_24; db:Pfam-A.hmm|PF01022.20 evalue:3.4e-10 score:38.9 best_domain_score:37.9 name:HTH_5; db:Pfam-A.hmm|PF09339.10 evalue:6.6e-07 score:28.3 best_domain_score:27.3 name:HTH_IclR; db:Pfam-A.hmm|PF12802.7 evalue:6.8e-07 score:28.3 best_domain_score:27.4 name:MarR_2; db:Pfam-A.hmm|PF01978.19 evalue:1.8e-07 score:30.1 best_domain_score:29.3 name:TrmB;
48709 48062 CDS
ID metaerg.pl|08748
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia;s__Devosia sp001425445;
genomedb_acc GCF_001425445.1;
genomedb_target db:genomedb|GCF_001425445.1|WP_061909601.1 1 213 evalue:1.9e-100 qcov:99.10 identity:78.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF06283;
pfam_desc Trehalose utilisation;
pfam_id ThuA;
pfam_target db:Pfam-A.hmm|PF06283.11 evalue:7.6e-40 score:136.6 best_domain_score:136.4 name:ThuA;
49838 48729 CDS
ID metaerg.pl|08749
allec_ids 1.1.1.18;
allgo_ids GO:0016491; GO:0050112; GO:0019310;
allko_ids K00010;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Devosiaceae;g__Devosia;s__Devosia sp003056355;
genomedb_acc GCF_003056355.1;
genomedb_target db:genomedb|GCF_003056355.1|WP_108460097.1 6 368 evalue:8.7e-141 qcov:98.40 identity:65.60;
kegg_pathway_id 00562;
kegg_pathway_name Inositol phosphate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id PWY-5940;
metacyc_pathway_name streptomycin biosynthesis;;
metacyc_pathway_type Antibiotic-Biosynthesis;;
pfam_acc PF01408;
pfam_desc Oxidoreductase family, NAD-binding Rossmann fold;
pfam_id GFO_IDH_MocA;
pfam_target db:Pfam-A.hmm|PF01408.22 evalue:3.6e-17 score:62.6 best_domain_score:61.9 name:GFO_IDH_MocA;
sprot_desc Inositol 2-dehydrogenase;
sprot_id sp|Q8XZZ9|IOLG_RALSO;
sprot_target db:uniprot_sprot|sp|Q8XZZ9|IOLG_RALSO 9 271 evalue:1.0e-07 qcov:71.30 identity:27.20;
51075 49828 CDS
ID metaerg.pl|08750
allko_ids K00845;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Dongiales;f__Dongiaceae;g__Dongia;s__Dongia sp000620685;
genomedb_acc GCF_000620685.1;
genomedb_target db:genomedb|GCF_000620685.1|WP_051562457.1 1 409 evalue:1.8e-110 qcov:98.60 identity:53.00;
kegg_pathway_id 00010; 00052; 00521; 00500;
kegg_pathway_name Glycolysis / Gluconeogenesis; Galactose metabolism; Streptomycin biosynthesis; Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00480;
pfam_desc ROK family;
pfam_id ROK;
pfam_target db:Pfam-A.hmm|PF00480.20 evalue:2e-24 score:85.8 best_domain_score:85.3 name:ROK;
51257 52564 CDS
ID metaerg.pl|08751
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Sinorhizobium;s__Sinorhizobium sp000378985;
genomedb_acc GCF_000378985.1;
genomedb_target db:genomedb|GCF_000378985.1|WP_018236726.1 13 435 evalue:8.3e-159 qcov:97.20 identity:62.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF01547; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:1.7e-27 score:96.4 best_domain_score:95.9 name:SBP_bac_1; db:Pfam-A.hmm|PF13416.6 evalue:3.7e-32 score:111.5 best_domain_score:111.1 name:SBP_bac_8;
sp YES;
51257 51358 signal_peptide
ID metaerg.pl|08752
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
52635 53582 CDS
ID metaerg.pl|08753
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0008643;
allko_ids K02025; K10109;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Sinorhizobium;s__Sinorhizobium medicae;
genomedb_acc GCF_000017145.1;
genomedb_target db:genomedb|GCF_000017145.1|YP_001328613.1 18 315 evalue:1.4e-126 qcov:94.60 identity:75.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.5e-13 score:48.6 best_domain_score:48.6 name:BPD_transp_1;
sprot_desc Trehalose/maltose transport system permease protein MalF;
sprot_id sp|O51924|MALF_THELN;
sprot_target db:uniprot_sprot|sp|O51924|MALF_THELN 39 306 evalue:1.2e-33 qcov:85.10 identity:34.70;
tm_num 6;
52635 53582 transmembrane_helix
ID metaerg.pl|08754
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i52734-52802o52926-52994i53013-53081o53175-53243i53328-53396o53487-53555i;
53575 54456 CDS
ID metaerg.pl|08755
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K02026; K10190; K10119;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Leaf454;s__Leaf454 sp001424685;
genomedb_acc GCF_001424685.1;
genomedb_target db:genomedb|GCF_001424685.1|WP_056507169.1 4 293 evalue:5.9e-124 qcov:99.00 identity:76.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.7e-16 score:59.7 best_domain_score:59.7 name:BPD_transp_1;
sprot_desc Probable ABC transporter permease protein YurM;
sprot_id sp|O32154|YURM_BACSU;
sprot_target db:uniprot_sprot|sp|O32154|YURM_BACSU 29 293 evalue:3.1e-39 qcov:90.40 identity:31.70;
tm_num 6;
53575 54456 transmembrane_helix
ID metaerg.pl|08756
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i53650-53718o53851-53919i53938-54006o54049-54108i54169-54237o54349-54408i;
54526 55590 CDS
ID metaerg.pl|08757
allgo_ids GO:0005524; GO:0005886; GO:0016887;
allko_ids K10000; K02023; K02018; K10195; K10243; K01990; K02000; K10230; K10111; K01998; K10112; K02049; K02065; K01995; K11076; K02193; K02013; K10235; K06857; K05816; K10199; K10191; K02071; K06861; K01996; K02045; K11072; K10239; K02062; K02004; K02006; K02052; K02010; K05847; K01997; K02003; K02032; K02017; K11084;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Pararhizobium;s__Pararhizobium polonicum;
genomedb_acc GCF_001687365.1;
genomedb_target db:genomedb|GCF_001687365.1|WP_068953967.1 1 354 evalue:5.1e-130 qcov:100.00 identity:66.90;
kegg_pathway_id 02010; 00910;
kegg_pathway_name ABC transporters - General; Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF13304; PF00005; PF17912; PF03459; PF08402;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; MalK OB fold domain; TOBE domain; TOBE domain;
pfam_id AAA_21; ABC_tran; OB_MalK; TOBE; TOBE_2;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.3e-09 score:37.6 best_domain_score:18.8 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.1e-31 score:108.5 best_domain_score:107.9 name:ABC_tran; db:Pfam-A.hmm|PF17912.1 evalue:4.7e-11 score:42.6 best_domain_score:40.5 name:OB_MalK; db:Pfam-A.hmm|PF03459.17 evalue:2.5e-07 score:30.1 best_domain_score:25.9 name:TOBE; db:Pfam-A.hmm|PF08402.10 evalue:9.2e-10 score:37.8 best_domain_score:36.4 name:TOBE_2;
sprot_desc Uncharacterized ABC transporter ATP-binding protein y4oS;
sprot_id sp|P55604|Y4OS_SINFN;
sprot_target db:uniprot_sprot|sp|P55604|Y4OS_SINFN 1 354 evalue:1.8e-118 qcov:100.00 identity:63.80;
56476 55604 CDS
ID metaerg.pl|08758
allgo_ids GO:0003700; GO:0006355;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__XJSP;s__XJSP sp002900965;
genomedb_acc GCF_002900965.1;
genomedb_target db:genomedb|GCF_002900965.1|WP_103333991.1 11 257 evalue:4.2e-98 qcov:85.20 identity:76.10;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:1.5e-22 score:79.6 best_domain_score:78.9 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:8.9e-16 score:56.5 best_domain_score:55.6 name:GntR;
56620 57648 CDS
ID metaerg.pl|08759
allgo_ids GO:0055085; GO:0030288; GO:0030246; GO:0034219;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus tibetensis;
genomedb_acc GCF_900102505.1;
genomedb_target db:genomedb|GCF_900102505.1|WP_090743794.1 1 341 evalue:3.6e-165 qcov:99.70 identity:83.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:1.1e-76 score:257.2 best_domain_score:256.7 name:DctP;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P43020|YIIZ_SALTY;
sprot_target db:uniprot_sprot|sp|P43020|YIIZ_SALTY 37 310 evalue:3.9e-33 qcov:80.10 identity:31.20;
tigrfam_acc TIGR00787;
tigrfam_desc TRAP transporter solute receptor, DctP family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctP;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00787 evalue:1.1e-61 score:207.6 best_domain_score:207.0 name:TIGR00787;
tm_num 1;
56620 56691 signal_peptide
ID metaerg.pl|08760
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
56620 57648 transmembrane_helix
ID metaerg.pl|08761
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i56632-56685o;
57824 58294 CDS
ID metaerg.pl|08762
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__XJSP;s__XJSP sp002900965;
genomedb_acc GCF_002900965.1;
genomedb_target db:genomedb|GCF_002900965.1|WP_103333993.1 1 143 evalue:1.2e-54 qcov:91.70 identity:77.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:3.6e-26 score:90.9 best_domain_score:90.6 name:DctQ;
tm_num 3;
57824 58294 transmembrane_helix
ID metaerg.pl|08763
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology o57905-57973i58031-58099o58142-58210i;
58291 59565 CDS
ID metaerg.pl|08764
allgo_ids GO:0016021; GO:0005886; GO:0022857; GO:0008643;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus tibetensis;
genomedb_acc GCF_900102505.1;
genomedb_target db:genomedb|GCF_900102505.1|WP_090743797.1 1 424 evalue:8.4e-180 qcov:100.00 identity:84.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:1e-96 score:323.5 best_domain_score:323.3 name:DctM;
sprot_desc Sialic acid TRAP transporter large permease protein SiaM;
sprot_id sp|Q9KR66|SIAM_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KR66|SIAM_VIBCH 9 422 evalue:6.3e-49 qcov:97.60 identity:35.40;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:1.6e-103 score:345.8 best_domain_score:345.6 name:TIGR00786;
tm_num 12;
58291 59565 transmembrane_helix
ID metaerg.pl|08765
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology o58318-58386i58420-58488o58567-58635i58696-58764o58792-58860i58921-58989o59017-59085i59122-59190o59218-59277i59281-59337o59365-59433i59470-59538o;
59609 60781 CDS
ID metaerg.pl|08766
allec_ids 4.2.1.6;
allgo_ids GO:0008869; GO:0000287; GO:0009063; GO:0034194;
allko_ids K01781; K01631; K01684;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__XJSP;s__XJSP sp002794355;
genomedb_acc GCF_002794355.1;
genomedb_target db:genomedb|GCF_002794355.1|WP_100197591.1 1 390 evalue:1.5e-199 qcov:100.00 identity:84.40;
kegg_pathway_id 00052; 00622; 00362;
kegg_pathway_name Galactose metabolism; Toluene and xylene degradation; Benzoate degradation via hydroxylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id GALACTCAT-PWY;
metacyc_pathway_name D-galactonate degradation;;
metacyc_pathway_type SUGAR-ACIDS-DEG;;
pfam_acc PF13378; PF02746;
pfam_desc Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain;
pfam_id MR_MLE_C; MR_MLE_N;
pfam_target db:Pfam-A.hmm|PF13378.6 evalue:1e-51 score:174.9 best_domain_score:174.3 name:MR_MLE_C; db:Pfam-A.hmm|PF02746.16 evalue:1.5e-18 score:66.3 best_domain_score:65.3 name:MR_MLE_N;
sprot_desc D-galactonate dehydratase;
sprot_id sp|Q6CYT9|DGOD_PECAS;
sprot_target db:uniprot_sprot|sp|Q6CYT9|DGOD_PECAS 1 390 evalue:3.9e-61 qcov:100.00 identity:34.80;
61000 62007 CDS
ID metaerg.pl|08767
allec_ids 1.-.-.-;
allgo_ids GO:0016705; GO:0055114;
allko_ids K00517;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter sp000526275;
genomedb_acc GCF_000526275.1;
genomedb_target db:genomedb|GCF_000526275.1|WP_024811374.1 1 335 evalue:6.2e-162 qcov:100.00 identity:85.40;
kegg_pathway_id 00940; 00361; 00903; 00626;
kegg_pathway_name Phenylpropanoid biosynthesis; gamma-Hexachlorocyclohexane degradation; Limonene and pinene degradation; Naphthalene and anthracene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987; PWY-5826; PWY-2821; PWY-4302; PWY-5271;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:3.8e-35 score:121.1 best_domain_score:118.6 name:Bac_luciferase;
sprot_desc Luciferase-like monooxygenase;
sprot_id sp|P0ADV6|YHBW_ECOL6;
sprot_target db:uniprot_sprot|sp|P0ADV6|YHBW_ECOL6 4 328 evalue:2.7e-95 qcov:97.00 identity:55.40;
tigrfam_acc TIGR03558;
tigrfam_desc luciferase family oxidoreductase, group 1;
tigrfam_mainrole Unknown function;
tigrfam_name oxido_grp_1;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR03558 evalue:8.8e-132 score:438.4 best_domain_score:438.2 name:TIGR03558;
62165 62090 tRNA
ID metaerg.pl|08768
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
name tRNA_Thr_cgt;
63649 62210 CDS
ID metaerg.pl|08769
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954222.1 1 477 evalue:8.4e-229 qcov:99.60 identity:85.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF07219; PF14559;
pfam_desc HemY protein N-terminus; Tetratricopeptide repeat;
pfam_id HemY_N; TPR_19;
pfam_target db:Pfam-A.hmm|PF07219.13 evalue:1e-26 score:92.4 best_domain_score:85.0 name:HemY_N; db:Pfam-A.hmm|PF14559.6 evalue:1.1e-07 score:31.5 best_domain_score:17.3 name:TPR_19;
tm_num 2;
63649 62210 transmembrane_helix
ID metaerg.pl|08770
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology o62219-62287i62354-62422o;
64893 63661 CDS
ID metaerg.pl|08771
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954223.1 1 410 evalue:6.8e-110 qcov:100.00 identity:60.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
tm_num 1;
64893 63661 transmembrane_helix
ID metaerg.pl|08772
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i63943-64011o;
65698 64982 CDS
ID metaerg.pl|08773
allgo_ids GO:0004852; GO:0033014;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_026352256.1 1 235 evalue:6.1e-95 qcov:98.70 identity:78.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF02602;
pfam_desc Uroporphyrinogen-III synthase HemD;
pfam_id HEM4;
pfam_target db:Pfam-A.hmm|PF02602.15 evalue:5.8e-22 score:77.4 best_domain_score:77.1 name:HEM4;
65768 66844 CDS
ID metaerg.pl|08774
allec_ids 2.3.1.234;
allgo_ids GO:0003824; GO:0009058; GO:0005737; GO:0005506; GO:0004222; GO:0061711; GO:0002949;
allko_ids K01409;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954225.1 3 358 evalue:1.5e-174 qcov:99.40 identity:88.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF02543; PF00814;
pfam_desc Carbamoyltransferase N-terminus; Glycoprotease family;
pfam_id Carbam_trans_N; Peptidase_M22;
pfam_target db:Pfam-A.hmm|PF02543.15 evalue:2.3e-06 score:26.7 best_domain_score:17.6 name:Carbam_trans_N; db:Pfam-A.hmm|PF00814.25 evalue:2.4e-94 score:315.3 best_domain_score:315.1 name:Peptidase_M22;
sprot_desc tRNA N6-adenosine threonylcarbamoyltransferase;
sprot_id sp|Q1GCQ5|TSAD_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GCQ5|TSAD_RUEST 2 358 evalue:1.8e-142 qcov:99.70 identity:70.20;
tigrfam_acc TIGR00329; TIGR03723;
tigrfam_desc metallohydrolase, glycoprotease/Kae1 family; tRNA threonylcarbamoyl adenosine modification protein TsaD;
tigrfam_mainrole Protein fate; Protein synthesis;
tigrfam_name gcp_kae1; T6A_TsaD_YgjD;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides; tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00329 evalue:2.3e-94 score:315.2 best_domain_score:315.0 name:TIGR00329; db:TIGRFAMs.hmm|TIGR03723 evalue:6.4e-119 score:395.9 best_domain_score:395.7 name:TIGR03723;
66841 67803 CDS
ID metaerg.pl|08775
allec_ids 1.1.1.94;
allgo_ids GO:0004367; GO:0005975; GO:0055114; GO:0009331; GO:0047952; GO:0051287; GO:0046167; GO:0046168; GO:0006650; GO:0008654;
allko_ids K00006; K00057;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_007206243.1 1 320 evalue:1.4e-139 qcov:100.00 identity:83.40;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id PHOSLIPSYN2-PWY; PWY-5667; PWY0-1319; PHOSLIPSYN-PWY; PWY4FS-8; PWY-5981; PWY4FS-7;
metacyc_pathway_name superpathway of phospholipid biosynthesis II (plants);; CDP-diacylglycerol biosynthesis I;; CDP-diacylglycerol biosynthesis II;; superpathway of phospholipid biosynthesis I (bacteria);; phosphatidylglycerol biosynthesis II (non-plastidic);; CDP-diacylglycerol biosynthesis III;; phosphatidylglycerol biosynthesis I (plastidic);;
metacyc_pathway_type Phospholipid-Biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; CDP-diacylglycerol-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;;
pfam_acc PF02558; PF07479; PF01210;
pfam_desc Ketopantoate reductase PanE/ApbA; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus;
pfam_id ApbA; NAD_Gly3P_dh_C; NAD_Gly3P_dh_N;
pfam_target db:Pfam-A.hmm|PF02558.16 evalue:2.6e-06 score:26.4 best_domain_score:25.6 name:ApbA; db:Pfam-A.hmm|PF07479.14 evalue:2.6e-41 score:140.4 best_domain_score:139.9 name:NAD_Gly3P_dh_C; db:Pfam-A.hmm|PF01210.23 evalue:7.3e-30 score:103.3 best_domain_score:102.6 name:NAD_Gly3P_dh_N;
sp YES;
sprot_desc Glycerol-3-phosphate dehydrogenase [NAD(P)+];
sprot_id sp|Q5LLR6|GPDA_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LLR6|GPDA_RUEPO 1 320 evalue:4.8e-94 qcov:100.00 identity:58.90;
66841 66900 signal_peptide
ID metaerg.pl|08776
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
67804 68076 CDS
ID metaerg.pl|08777
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954227.1 1 90 evalue:2.2e-37 qcov:100.00 identity:84.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF03795;
pfam_desc YCII-related domain;
pfam_id YCII;
pfam_target db:Pfam-A.hmm|PF03795.14 evalue:3e-19 score:68.5 best_domain_score:68.3 name:YCII;
68076 68495 CDS
ID metaerg.pl|08778
allgo_ids GO:0005634;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia maricola;
genomedb_acc GCF_002797915.1;
genomedb_target db:genomedb|GCF_002797915.1|WP_100368137.1 1 139 evalue:2.7e-66 qcov:100.00 identity:87.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF01878;
pfam_desc EVE domain;
pfam_id EVE;
pfam_target db:Pfam-A.hmm|PF01878.18 evalue:1e-47 score:161.0 best_domain_score:160.8 name:EVE;
sprot_desc Thymocyte nuclear protein 1;
sprot_id sp|Q91YJ3|THYN1_MOUSE;
sprot_target db:uniprot_sprot|sp|Q91YJ3|THYN1_MOUSE 3 139 evalue:3.2e-18 qcov:98.60 identity:36.10;
69032 68691 CDS
ID metaerg.pl|08779
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954229.1 1 112 evalue:1.5e-51 qcov:99.10 identity:92.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF11015;
pfam_desc Protein of unknown function (DUF2853);
pfam_id DUF2853;
pfam_target db:Pfam-A.hmm|PF11015.8 evalue:1.3e-44 score:150.2 best_domain_score:150.1 name:DUF2853;
69934 69176 CDS
ID metaerg.pl|08780
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia rosea;
genomedb_acc GCF_900156505.1;
genomedb_target db:genomedb|GCF_900156505.1|WP_084190842.1 1 252 evalue:1.1e-86 qcov:100.00 identity:60.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF06904;
pfam_desc Extensin-like protein C-terminus;
pfam_id Extensin-like_C;
pfam_target db:Pfam-A.hmm|PF06904.12 evalue:5.2e-49 score:165.9 best_domain_score:165.6 name:Extensin-like_C;
tm_num 1;
69934 69176 transmembrane_helix
ID metaerg.pl|08781
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i69233-69301o;
71346 69958 CDS
ID metaerg.pl|08782
allec_ids 3.3.1.1;
allgo_ids GO:0051287; GO:0055114; GO:0005737; GO:0004013; GO:0006730;
allko_ids K01251;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087213513.1 1 462 evalue:5.8e-259 qcov:100.00 identity:97.80;
kegg_pathway_id 00450; 00271;
kegg_pathway_name Selenoamino acid metabolism; Methionine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id PWY-5041; PWY-6292; PWY-5328; METHIONINE-DEG1-PWY;
metacyc_pathway_name S-adenosyl-L-methionine cycle II;; superpathway of L-cysteine biosynthesis (mammalian);; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);;
metacyc_pathway_type S-adenosyl-L-methionine-cycle;; CYSTEINE-SYN; Super-Pathways;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;;
pfam_acc PF02826; PF05221; PF00670; PF07991;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding domain; Acetohydroxy acid isomeroreductase, NADPH-binding domain;
pfam_id 2-Hacid_dh_C; AdoHcyase; AdoHcyase_NAD; IlvN;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:5.6e-07 score:28.3 best_domain_score:27.6 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF05221.17 evalue:2.5e-143 score:475.9 best_domain_score:475.7 name:AdoHcyase; db:Pfam-A.hmm|PF00670.21 evalue:2.1e-80 score:267.7 best_domain_score:267.2 name:AdoHcyase_NAD; db:Pfam-A.hmm|PF07991.12 evalue:8.6e-05 score:21.4 best_domain_score:20.9 name:IlvN;
sprot_desc Adenosylhomocysteinase;
sprot_id sp|Q9ZNA5|SAHH_ROSDO;
sprot_target db:uniprot_sprot|sp|Q9ZNA5|SAHH_ROSDO 1 462 evalue:9.7e-237 qcov:100.00 identity:89.60;
tigrfam_acc TIGR00936;
tigrfam_desc adenosylhomocysteinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name ahcY;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00936 evalue:4.3e-179 score:594.8 best_domain_score:594.6 name:TIGR00936;
71461 72060 CDS
ID metaerg.pl|08783
allko_ids K06952;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_026352257.1 1 196 evalue:1.2e-96 qcov:98.50 identity:86.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF12917;
pfam_desc HD containing hydrolase-like enzyme;
pfam_id HD_2;
pfam_target db:Pfam-A.hmm|PF12917.7 evalue:8.9e-10 score:37.8 best_domain_score:26.3 name:HD_2;
sprot_desc hypothetical protein;
sprot_id sp|P42506|Y048_RHOCB;
sprot_target db:uniprot_sprot|sp|P42506|Y048_RHOCB 5 196 evalue:4.0e-70 qcov:96.50 identity:67.20;
72118 73794 CDS
ID metaerg.pl|08784
allgo_ids GO:0016021; GO:0005886; GO:0071111; GO:0071732;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954233.1 1 558 evalue:5.4e-227 qcov:100.00 identity:69.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00563; PF00990;
pfam_desc EAL domain; Diguanylate cyclase, GGDEF domain;
pfam_id EAL; GGDEF;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:1e-60 score:204.5 best_domain_score:203.8 name:EAL; db:Pfam-A.hmm|PF00990.21 evalue:9.5e-34 score:115.7 best_domain_score:114.9 name:GGDEF;
sprot_desc Uncharacterized signaling protein PA3311;
sprot_id sp|Q9HYT3|Y3311_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HYT3|Y3311_PSEAE 110 546 evalue:1.4e-67 qcov:78.30 identity:34.60;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:5.2e-26 score:90.5 best_domain_score:89.8 name:TIGR00254;
tm_num 2;
72118 73794 transmembrane_helix
ID metaerg.pl|08785
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology o72181-72249i72310-72378o;
73850 74461 CDS
ID metaerg.pl|08786
allec_ids 3.1.13.5;
allgo_ids GO:0003676; GO:0006139; GO:0008408; GO:0005737; GO:0000166; GO:0033890; GO:0042780;
allko_ids K03684;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954234.1 1 203 evalue:4.5e-107 qcov:100.00 identity:91.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id PWY0-1479;
metacyc_pathway_name tRNA processing;;
metacyc_pathway_type Nucleic-Acid-Processing;;
pfam_acc PF01612;
pfam_desc 3'-5' exonuclease;
pfam_id DNA_pol_A_exo1;
pfam_target db:Pfam-A.hmm|PF01612.20 evalue:1.5e-32 score:111.9 best_domain_score:111.5 name:DNA_pol_A_exo1;
sprot_desc Ribonuclease D;
sprot_id sp|A0KXU5|RND_SHESA;
sprot_target db:uniprot_sprot|sp|A0KXU5|RND_SHESA 18 174 evalue:2.3e-09 qcov:77.30 identity:30.20;
74461 75429 CDS
ID metaerg.pl|08787
allec_ids 5.3.1.13;
allgo_ids GO:0097367; GO:1901135; GO:0019146; GO:0046872; GO:0009103;
allko_ids K01697; K00845; K02000; K05847; K06041;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954235.1 1 322 evalue:3.5e-162 qcov:100.00 identity:90.40;
kegg_pathway_id 00052; 00450; 02010; 00260; 00500; 00521; 00271; 00010;
kegg_pathway_name Galactose metabolism; Selenoamino acid metabolism; ABC transporters - General; Glycine, serine and threonine metabolism; Starch and sucrose metabolism; Streptomycin biosynthesis; Methionine metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id LPSSYN-PWY; PWY-1269; KDO-NAGLIPASYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; CMP-3-deoxy-D-manno-octulosonate biosynthesis;; superpathway of (Kdo)2-lipid A biosynthesis;;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; CMP-KDO-Biosynthesis; CMP-Sugar-Biosynthesis;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;;
pfam_acc PF00571; PF01380; PF13580;
pfam_desc CBS domain; SIS domain; SIS domain;
pfam_id CBS; SIS; SIS_2;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:4.9e-15 score:55.0 best_domain_score:27.3 name:CBS; db:Pfam-A.hmm|PF01380.22 evalue:3.7e-28 score:97.2 best_domain_score:96.6 name:SIS; db:Pfam-A.hmm|PF13580.6 evalue:3.7e-07 score:29.5 best_domain_score:17.4 name:SIS_2;
sprot_desc Arabinose 5-phosphate isomerase KdsD;
sprot_id sp|Q9HVW0|KDSD_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HVW0|KDSD_PSEAE 1 322 evalue:3.6e-73 qcov:100.00 identity:47.90;
tigrfam_acc TIGR00393;
tigrfam_desc sugar isomerase, KpsF/GutQ family;
tigrfam_mainrole Energy metabolism;
tigrfam_name kpsF;
tigrfam_sub1role Sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR00393 evalue:7.3e-87 score:290.5 best_domain_score:290.2 name:TIGR00393;
75432 76031 CDS
ID metaerg.pl|08788
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954236.1 1 198 evalue:5.3e-84 qcov:99.50 identity:81.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
sp YES;
tm_num 1;
75432 75551 signal_peptide
ID metaerg.pl|08789
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
75432 76031 transmembrane_helix
ID metaerg.pl|08790
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology i75465-75533o;
76059 76544 CDS
ID metaerg.pl|08791
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_051108185.1 18 161 evalue:1.9e-55 qcov:89.40 identity:83.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF06835; PF03968;
pfam_desc Lipopolysaccharide-assembly, LptC-related; OstA-like protein;
pfam_id LptC; OstA;
pfam_target db:Pfam-A.hmm|PF06835.13 evalue:0.00019 score:20.3 best_domain_score:14.0 name:LptC; db:Pfam-A.hmm|PF03968.14 evalue:1.6e-22 score:79.0 best_domain_score:78.6 name:OstA;
sp YES;
tigrfam_acc TIGR03002;
tigrfam_desc lipopolysaccharide transport periplasmic protein LptA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name outer_YhbN_LptA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR03002 evalue:9.9e-22 score:76.5 best_domain_score:76.1 name:TIGR03002;
76059 76121 signal_peptide
ID metaerg.pl|08792
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
76544 77305 CDS
ID metaerg.pl|08793
allgo_ids GO:0005524; GO:0043190; GO:0016887; GO:0055085;
allko_ids K05816; K02013; K01998; K10111; K02065; K01995; K02049; K11962; K02000; K02023; K01990; K02017; K11084; K02006; K02052; K02003; K01997; K05847; K02010; K02045; K11072; K01996; K02071; K06861;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_040482951.1 1 253 evalue:2.3e-132 qcov:100.00 identity:95.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.5e-07 score:29.6 best_domain_score:16.1 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.3e-33 score:114.8 best_domain_score:113.9 name:ABC_tran;
sprot_desc Probable ABC transporter ATP-binding protein AZC_3926;
sprot_id sp|P33982|Y3926_AZOC5;
sprot_target db:uniprot_sprot|sp|P33982|Y3926_AZOC5 11 252 evalue:2.7e-79 qcov:95.70 identity:60.70;
tigrfam_acc TIGR04406;
tigrfam_desc LPS export ABC transporter ATP-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name LPS_export_lptB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04406 evalue:6.9e-109 score:361.9 best_domain_score:361.7 name:TIGR04406;
77544 78119 CDS
ID metaerg.pl|08794
allgo_ids GO:0044238; GO:0005737; GO:0006417;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954239.1 1 191 evalue:8.9e-97 qcov:100.00 identity:95.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF02482; PF16321;
pfam_desc Sigma 54 modulation protein / S30EA ribosomal protein; Sigma 54 modulation/S30EA ribosomal protein C terminus;
pfam_id Ribosomal_S30AE; Ribosom_S30AE_C;
pfam_target db:Pfam-A.hmm|PF02482.19 evalue:1.5e-19 score:69.8 best_domain_score:69.1 name:Ribosomal_S30AE; db:Pfam-A.hmm|PF16321.5 evalue:8.5e-18 score:63.0 best_domain_score:61.4 name:Ribosom_S30AE_C;
sprot_desc Ribosome hibernation promotion factor;
sprot_id sp|P17265|HPF_RHIME;
sprot_target db:uniprot_sprot|sp|P17265|HPF_RHIME 1 186 evalue:3.1e-32 qcov:97.40 identity:37.60;
tigrfam_acc TIGR00741;
tigrfam_desc ribosomal subunit interface protein;
tigrfam_mainrole Protein synthesis;
tigrfam_name yfiA;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00741 evalue:8.1e-20 score:70.4 best_domain_score:69.8 name:TIGR00741;
78148 78612 CDS
ID metaerg.pl|08795
allgo_ids GO:0005737; GO:0016301; GO:0030295; GO:0008982; GO:0009401; GO:0032412;
allko_ids K02806; K02769; K02768; K02770; K11202; K11203; K02794; K11201; K11200; K02793; K11198; K11199; K02795;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954240.1 1 154 evalue:8.5e-74 qcov:100.00 identity:93.50;
kegg_pathway_id 02060;
kegg_pathway_name Phosphotransferase system (PTS);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00359;
pfam_desc Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2;
pfam_id PTS_EIIA_2;
pfam_target db:Pfam-A.hmm|PF00359.22 evalue:9.2e-31 score:105.9 best_domain_score:105.6 name:PTS_EIIA_2;
sprot_desc Nitrogen regulatory protein;
sprot_id sp|P30335|PTSN_BRADU;
sprot_target db:uniprot_sprot|sp|P30335|PTSN_BRADU 1 154 evalue:2.2e-28 qcov:100.00 identity:41.60;
80024 78609 CDS
ID metaerg.pl|08796
allgo_ids GO:0008146; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954241.1 1 470 evalue:3.7e-205 qcov:99.80 identity:73.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF03567;
pfam_desc Sulfotransferase family;
pfam_id Sulfotransfer_2;
pfam_target db:Pfam-A.hmm|PF03567.14 evalue:7.1e-07 score:28.6 best_domain_score:26.4 name:Sulfotransfer_2;
81724 80021 CDS
ID metaerg.pl|08797
allgo_ids GO:0008375; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_026352258.1 1 567 evalue:1.9e-275 qcov:100.00 identity:79.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF02485;
pfam_desc Core-2/I-Branching enzyme;
pfam_id Branch;
pfam_target db:Pfam-A.hmm|PF02485.21 evalue:6.4e-15 score:54.6 best_domain_score:53.8 name:Branch;
82680 81721 CDS
ID metaerg.pl|08798
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954243.1 6 319 evalue:1.0e-166 qcov:98.40 identity:86.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF13704;
pfam_desc Glycosyl transferase family 2;
pfam_id Glyco_tranf_2_4;
pfam_target db:Pfam-A.hmm|PF13704.6 evalue:9.2e-25 score:86.2 best_domain_score:84.7 name:Glyco_tranf_2_4;
83784 82771 CDS
ID metaerg.pl|08799
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954244.1 4 336 evalue:3.7e-170 qcov:98.80 identity:81.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF13704;
pfam_desc Glycosyl transferase family 2;
pfam_id Glyco_tranf_2_4;
pfam_target db:Pfam-A.hmm|PF13704.6 evalue:2.4e-23 score:81.7 best_domain_score:80.6 name:Glyco_tranf_2_4;
84700 83807 CDS
ID metaerg.pl|08800
allec_ids 2.7.7.9;
allgo_ids GO:0009058; GO:0016779; GO:0003983; GO:0009246; GO:0006011;
allko_ids K00640; K01835; K00677; K00975; K01840; K04042; K02536; K00963; K00674; K11528; K00966; K00972; K05822;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia maritima;
genomedb_acc GCF_003003285.1;
genomedb_target db:genomedb|GCF_003003285.1|WP_106358657.1 1 289 evalue:4.7e-137 qcov:97.30 identity:83.70;
kegg_pathway_id 00030; 00520; 00010; 00920; 00521; 00500; 00272; 00540; 00051; 00530; 00300; 00040; 00052;
kegg_pathway_name Pentose phosphate pathway; Nucleotide sugars metabolism; Glycolysis / Gluconeogenesis; Sulfur metabolism; Streptomycin biosynthesis; Starch and sucrose metabolism; Cysteine metabolism; Lipopolysaccharide biosynthesis; Fructose and mannose metabolism; Aminosugars metabolism; Lysine biosynthesis; Pentose and glucuronate interconversions; Galactose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id SUCSYN-PWY; COLANSYN-PWY; PWY-5067; PWY-3821; PWY-3801; PWY-621; PWY-5114;
metacyc_pathway_name sucrose biosynthesis I (from photosynthesis);; colanic acid building blocks biosynthesis;; glycogen biosynthesis II (from UDP-D-Glucose);; D-galactose detoxification;; sucrose degradation II (sucrose synthase);; sucrose degradation III (sucrose invertase);; UDP-sugars interconversion;;
metacyc_pathway_type Sucrose-Biosynthesis; Super-Pathways;; Carbohydrates-Biosynthesis; Super-Pathways;; GLYCOGEN-BIOSYN;; Detoxification;; SUCROSE-DEG;; SUCROSE-DEG;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;;
pfam_acc PF00483; PF12804;
pfam_desc Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF00483.23 evalue:3.6e-27 score:94.8 best_domain_score:94.1 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:5.3e-08 score:32.6 best_domain_score:31.4 name:NTP_transf_3;
sprot_desc UTP--glucose-1-phosphate uridylyltransferase;
sprot_id sp|Q05852|GTAB_BACSU;
sprot_target db:uniprot_sprot|sp|Q05852|GTAB_BACSU 3 291 evalue:5.7e-81 qcov:97.30 identity:50.90;
tigrfam_acc TIGR01099;
tigrfam_desc UTP--glucose-1-phosphate uridylyltransferase;
tigrfam_mainrole Cell envelope;
tigrfam_name galU;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01099 evalue:2.4e-100 score:334.6 best_domain_score:334.4 name:TIGR01099;
85649 84792 CDS
ID metaerg.pl|08801
allec_ids 2.7.7.38;
allgo_ids GO:0005737; GO:0008690; GO:0033468; GO:0009103;
allko_ids K00979;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_040483274.1 20 285 evalue:2.2e-131 qcov:93.30 identity:88.70;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
metacyc_pathway_id PWY-1269; LPSSYN-PWY; KDO-NAGLIPASYN-PWY; PWY-5111;
metacyc_pathway_name CMP-3-deoxy-D-manno-octulosonate biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; superpathway of (Kdo)2-lipid A biosynthesis;; ;
metacyc_pathway_type CMP-KDO-Biosynthesis; CMP-Sugar-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ;
pfam_acc PF02348; PF12804;
pfam_desc Cytidylyltransferase; MobA-like NTP transferase domain;
pfam_id CTP_transf_3; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF02348.19 evalue:6.8e-32 score:110.4 best_domain_score:109.9 name:CTP_transf_3; db:Pfam-A.hmm|PF12804.7 evalue:2.9e-08 score:33.5 best_domain_score:33.0 name:NTP_transf_3;
sprot_desc 3-deoxy-manno-octulosonate cytidylyltransferase;
sprot_id sp|Q0AST1|KDSB_MARMM;
sprot_target db:uniprot_sprot|sp|Q0AST1|KDSB_MARMM 20 276 evalue:2.5e-57 qcov:90.20 identity:46.30;
86391 85594 CDS
ID metaerg.pl|08802
allec_ids 3.1.3.7;
allgo_ids GO:0046854; GO:0005886; GO:0008441; GO:0000287; GO:0006790;
allko_ids K01082;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019954247.1 1 265 evalue:6.7e-127 qcov:100.00 identity:87.20;
kegg_pathway_id 00920;
kegg_pathway_name Sulfur metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF00459;
pfam_desc Inositol monophosphatase family;
pfam_id Inositol_P;
pfam_target db:Pfam-A.hmm|PF00459.25 evalue:2e-47 score:161.2 best_domain_score:160.9 name:Inositol_P;
sprot_desc 3'(2'),5'-bisphosphate nucleotidase CysQ;
sprot_id sp|Q8XCG6|CYSQ_ECO57;
sprot_target db:uniprot_sprot|sp|Q8XCG6|CYSQ_ECO57 14 253 evalue:1.6e-42 qcov:90.60 identity:45.50;
tigrfam_acc TIGR01331;
tigrfam_desc 3'(2'),5'-bisphosphate nucleotidase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name bisphos_cysQ;
tigrfam_sub1role Sulfur metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR01331 evalue:1.6e-76 score:256.4 best_domain_score:256.2 name:TIGR01331;
86505 87326 CDS
ID metaerg.pl|08803
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087211347.1 1 273 evalue:5.7e-121 qcov:100.00 identity:81.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
pfam_acc PF01061;
pfam_desc ABC-2 type transporter;
pfam_id ABC2_membrane;
pfam_target db:Pfam-A.hmm|PF01061.24 evalue:6.3e-07 score:28.2 best_domain_score:28.2 name:ABC2_membrane;
tm_num 7;
86505 87326 transmembrane_helix
ID metaerg.pl|08804
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 40.1028; 0.00333886; 40.0995; ;
topology o86613-86681i86718-86786o86796-86864i86883-86942o86970-87038i87075-87143o87219-87287i;
>Feature NODE_61_length_87571_cov_92.5129
902 1423 CDS
ID metaerg.pl|08805
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796577.1 1 163 evalue:6.4e-70 qcov:94.20 identity:81.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF09990;
pfam_desc Predicted membrane protein (DUF2231);
pfam_id DUF2231;
pfam_target db:Pfam-A.hmm|PF09990.9 evalue:1.2e-20 score:73.1 best_domain_score:73.1 name:DUF2231;
tm_num 4;
902 1423 transmembrane_helix
ID metaerg.pl|08806
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o1001-1069i1103-1171o1199-1267i1286-1354o;
1447 2838 CDS
ID metaerg.pl|08807
allgo_ids GO:0016491; GO:0055114;
allko_ids K13411; K00380; K00326; K00245; K00235; K00366; K14581; K00240; K00529; K16161;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657551.1 14 463 evalue:2.6e-203 qcov:97.20 identity:76.20;
kegg_pathway_id 00720; 00920; 00632; 00020; 00910; 02020; 00071; 05012; 00530; 00360; 00190; 00650;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Sulfur metabolism; Benzoate degradation via CoA ligation; Citrate cycle (TCA cycle); Nitrogen metabolism; Two-component system - General; Fatty acid metabolism; Parkinson's disease; Aminosugars metabolism; Phenylalanine metabolism; Oxidative phosphorylation; Butanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF14358; PF08022; PF01794; PF00175;
pfam_desc Domain of unknown function (DUF4405); FAD-binding domain; Ferric reductase like transmembrane component; Oxidoreductase NAD-binding domain;
pfam_id DUF4405; FAD_binding_8; Ferric_reduct; NAD_binding_1;
pfam_target db:Pfam-A.hmm|PF14358.6 evalue:1.2e-05 score:25.0 best_domain_score:19.3 name:DUF4405; db:Pfam-A.hmm|PF08022.12 evalue:3.2e-06 score:26.4 best_domain_score:24.2 name:FAD_binding_8; db:Pfam-A.hmm|PF01794.19 evalue:1.5e-10 score:40.5 best_domain_score:40.5 name:Ferric_reduct; db:Pfam-A.hmm|PF00175.21 evalue:9.7e-18 score:64.1 best_domain_score:63.4 name:NAD_binding_1;
tm_num 6;
1447 2838 transmembrane_helix
ID metaerg.pl|08808
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i1525-1593o1636-1692i1753-1821o1864-1923i1960-2028o2056-2124i;
2940 4295 CDS
ID metaerg.pl|08809
allec_ids 1.4.1.4;
allgo_ids GO:0006520; GO:0016491; GO:0055114; GO:0005737; GO:0004354; GO:0006537;
allko_ids K00262; K00261;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469284.1 1 448 evalue:1.1e-180 qcov:99.30 identity:69.90;
kegg_pathway_id 00471; 00330; 00251; 00910;
kegg_pathway_name D-Glutamine and D-glutamate metabolism; Arginine and proline metabolism; Glutamate metabolism; Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id PWY490-3; PWY-5913; GLUTSYNIII-PWY; PWY-5675; PWY-5505;
metacyc_pathway_name nitrate reduction VI (assimilatory);; partial TCA cycle (obligate autotrophs);; L-glutamate biosynthesis III;; nitrate reduction V (assimilatory);; L-glutamate and L-glutamine biosynthesis;;
metacyc_pathway_type Nitrate-Reduction;; TCA-VARIANTS;; GLUTAMATE-SYN;; Nitrate-Reduction;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;;
pfam_acc PF00208; PF02812;
pfam_desc Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF00208.21 evalue:1.4e-64 score:217.4 best_domain_score:216.9 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:5.2e-43 score:145.3 best_domain_score:143.8 name:ELFV_dehydrog_N;
sprot_desc NADP-specific glutamate dehydrogenase;
sprot_id sp|Q8Z6F6|DHE4_SALTI;
sprot_target db:uniprot_sprot|sp|Q8Z6F6|DHE4_SALTI 9 448 evalue:1.6e-111 qcov:97.60 identity:50.00;
4333 5610 CDS
ID metaerg.pl|08810
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Ga0077555;s__Ga0077555 sp001464955;
genomedb_acc GCA_001464955.1;
genomedb_target db:genomedb|GCA_001464955.1|LNEM01000030.1_409 11 425 evalue:4.7e-98 qcov:97.60 identity:49.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF10011;
pfam_desc Predicted membrane protein (DUF2254);
pfam_id DUF2254;
pfam_target db:Pfam-A.hmm|PF10011.9 evalue:5.8e-89 score:297.7 best_domain_score:297.5 name:DUF2254;
tm_num 4;
4333 5610 transmembrane_helix
ID metaerg.pl|08811
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i4402-4470o4534-4602i4663-4722o4750-4818i;
6798 5632 CDS
ID metaerg.pl|08812
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468708.1 7 377 evalue:2.1e-116 qcov:95.60 identity:62.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:1e-41 score:142.5 best_domain_score:142.1 name:AI-2E_transport;
sprot_desc Putative transport protein HI_0338;
sprot_id sp|P44646|Y338_HAEIN;
sprot_target db:uniprot_sprot|sp|P44646|Y338_HAEIN 31 370 evalue:2.9e-08 qcov:87.60 identity:23.00;
tm_num 8;
6798 5632 transmembrane_helix
ID metaerg.pl|08813
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o5689-5748i5761-5814o5857-5925i6127-6195o6310-6378i6397-6465o6475-6543i6604-6672o;
6912 8225 CDS
ID metaerg.pl|08814
allec_ids 2.7.8.-;
allgo_ids GO:0003824; GO:0016021; GO:0005886; GO:0008808; GO:0032049;
allko_ids K06131;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796561.1 11 437 evalue:1.1e-177 qcov:97.70 identity:72.60;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id PHOSLIPSYN-PWY; TEICHOICACID-PWY; PWY-5668; PHOSLIPSYN2-PWY; PWY4FS-4; PWY-6385;
metacyc_pathway_name superpathway of phospholipid biosynthesis I (bacteria);; poly(glycerol phosphate) wall teichoic acid biosynthesis;; cardiolipin biosynthesis I;; superpathway of phospholipid biosynthesis II (plants);; phosphatidylcholine biosynthesis IV;; peptidoglycan biosynthesis III (mycobacteria);;
metacyc_pathway_type Phospholipid-Biosynthesis; Super-Pathways;; Teichoic-Acids-Biosynthesis;; Cardiolipin-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylcholineBiosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00614; PF13091;
pfam_desc Phospholipase D Active site motif; PLD-like domain;
pfam_id PLDc; PLDc_2;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:1.3e-12 score:46.5 best_domain_score:28.3 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:2.4e-41 score:140.0 best_domain_score:98.3 name:PLDc_2;
sprot_desc Cardiolipin synthase A;
sprot_id sp|Q4K3D9|CLSA_PSEF5;
sprot_target db:uniprot_sprot|sp|Q4K3D9|CLSA_PSEF5 63 437 evalue:1.3e-52 qcov:85.80 identity:34.80;
tm_num 1;
6912 8225 transmembrane_helix
ID metaerg.pl|08815
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i6972-7040o;
8607 8870 CDS
ID metaerg.pl|08816
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071478950.1 1 85 evalue:6.2e-21 qcov:97.70 identity:64.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
sp YES;
tm_num 1;
8607 8732 signal_peptide
ID metaerg.pl|08817
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
8607 8870 transmembrane_helix
ID metaerg.pl|08818
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i8664-8732o;
10056 8926 CDS
ID metaerg.pl|08819
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05901.1 1 376 evalue:4.5e-76 qcov:100.00 identity:46.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:2.8e-56 score:190.3 best_domain_score:190.0 name:AI-2E_transport;
tm_num 8;
10056 8926 transmembrane_helix
ID metaerg.pl|08820
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i8998-9066o9076-9144i9163-9231o9427-9495i9628-9696o9706-9774i9793-9861o9904-10008i;
10490 10197 CDS
ID metaerg.pl|08821
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468705.1 1 96 evalue:3.0e-16 qcov:99.00 identity:48.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
tm_num 3;
10490 10197 transmembrane_helix
ID metaerg.pl|08822
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i10215-10283o10311-10379i10416-10475o;
13027 10487 CDS
ID metaerg.pl|08823
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0009060; GO:0016021; GO:0020037; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071478952.1 13 842 evalue:0.0e+00 qcov:98.10 identity:79.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metabolic_acc TIGR02891;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, caa3-type;gene:CoxA;;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00115;
pfam_desc Cytochrome C and Quinol oxidase polypeptide I;
pfam_id COX1;
pfam_target db:Pfam-A.hmm|PF00115.20 evalue:2.5e-132 score:441.0 best_domain_score:441.0 name:COX1;
tigrfam_acc TIGR02891;
tigrfam_desc cytochrome c oxidase, subunit I;
tigrfam_mainrole Energy metabolism;
tigrfam_name CtaD_CoxA;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02891 evalue:2e-205 score:682.4 best_domain_score:681.8 name:TIGR02891;
tm_num 19;
13027 10487 transmembrane_helix
ID metaerg.pl|08824
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i10661-10729o10787-10855i10913-10981o11054-11122i11159-11227o11342-11398i11411-11479o11507-11575i11633-11701o11744-11812i11849-11917o11960-12028i12287-12355o12365-12424i12533-12601o12629-12697i12716-12784o12827-12892i12953-13021o;
13691 13020 CDS
ID metaerg.pl|08825
allec_ids 1.10.3.-;
allgo_ids GO:0004129; GO:0005507; GO:0016020; GO:0016021; GO:0005886; GO:0070469; GO:0009486; GO:0016682; GO:0042773;
allko_ids K02826;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796569.1 1 210 evalue:1.4e-72 qcov:94.20 identity:65.40;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id PWY-5439; PWY-5405; PWY-5466; PWY-5787; PWY-5476; PWY-5404;
metacyc_pathway_name betacyanin biosynthesis (via dopamine);; superpathway of betalain biosynthesis;; matairesinol biosynthesis;; oligomeric urushiol biosynthesis;; cornusiin E biosynthesis;; betaxanthin biosynthesis (via dopaxanthin);;
metacyc_pathway_type BETALAIN-ALKALOIDS;; BETALAIN-ALKALOIDS; Super-Pathways;; LIGNAN-SYN;; AROMATIC-COMPOUNDS-BIOSYN;; ELLAGITANNINS;; BETALAIN-ALKALOIDS;;
pfam_acc PF00116;
pfam_desc Cytochrome C oxidase subunit II, periplasmic domain;
pfam_id COX2;
pfam_target db:Pfam-A.hmm|PF00116.20 evalue:3e-15 score:55.4 best_domain_score:53.1 name:COX2;
sp YES;
sprot_desc Quinol oxidase subunit 2;
sprot_id sp|Q81HT3|QOX2_BACCR;
sprot_target db:uniprot_sprot|sp|Q81HT3|QOX2_BACCR 1 221 evalue:2.0e-14 qcov:99.10 identity:28.90;
tm_num 3;
13020 13061 lipoprotein_signal_peptide
ID metaerg.pl|08826
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
13691 13020 transmembrane_helix
ID metaerg.pl|08827
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i13032-13085o13113-13181i13239-13298o;
14194 13688 CDS
ID metaerg.pl|08828
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468703.1 1 168 evalue:1.5e-55 qcov:100.00 identity:67.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF03653;
pfam_desc Uncharacterised protein family (UPF0093);
pfam_id UPF0093;
pfam_target db:Pfam-A.hmm|PF03653.13 evalue:1.1e-12 score:47.6 best_domain_score:47.1 name:UPF0093;
tm_num 4;
14194 13688 transmembrane_helix
ID metaerg.pl|08829
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o13715-13783i13853-13921o13931-13999i14033-14101o;
14922 14191 CDS
ID metaerg.pl|08830
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071478955.1 7 232 evalue:3.3e-72 qcov:93.00 identity:64.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF09678;
pfam_desc Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG);
pfam_id Caa3_CtaG;
pfam_target db:Pfam-A.hmm|PF09678.10 evalue:2.5e-23 score:82.0 best_domain_score:73.0 name:Caa3_CtaG;
tm_num 7;
14922 14191 transmembrane_helix
ID metaerg.pl|08831
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o14260-14328i14365-14433o14443-14502i14521-14589o14599-14667i14686-14745o14821-14889i;
15924 14998 CDS
ID metaerg.pl|08832
allec_ids 2.7.1.26; 2.7.7.2; 2.7.1.26 2.7.7.2;
allgo_ids GO:0003919; GO:0009231; GO:0005524; GO:0008531; GO:0006747; GO:0009398;
allko_ids K11753;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797594.1 4 305 evalue:9.2e-136 qcov:98.10 identity:77.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id PWY-6168; RIBOSYN2-PWY; PWY-6167; PWY66-366;
metacyc_pathway_name flavin biosynthesis III (fungi);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis II (archaea);; flavin biosynthesis IV (mammalian);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF06574; PF01687;
pfam_desc FAD synthetase; Riboflavin kinase;
pfam_id FAD_syn; Flavokinase;
pfam_target db:Pfam-A.hmm|PF06574.12 evalue:8.7e-46 score:154.9 best_domain_score:154.5 name:FAD_syn; db:Pfam-A.hmm|PF01687.17 evalue:2.8e-34 score:117.0 best_domain_score:116.5 name:Flavokinase;
sprot_desc Bifunctional riboflavin kinase/FMN adenylyltransferase;
sprot_id sp|P44957|RIBF_HAEIN;
sprot_target db:uniprot_sprot|sp|P44957|RIBF_HAEIN 15 303 evalue:1.9e-42 qcov:93.80 identity:35.80;
tigrfam_acc TIGR00083;
tigrfam_desc riboflavin biosynthesis protein RibF;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribF;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00083 evalue:4.1e-71 score:238.9 best_domain_score:238.7 name:TIGR00083;
16431 15973 CDS
ID metaerg.pl|08833
allec_ids 4.2.1.119;
allgo_ids GO:0016836; GO:0006631; GO:0042621; GO:0051289;
allko_ids K14535; K17865;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482290.1 6 152 evalue:6.4e-74 qcov:96.70 identity:95.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id PWY-5138; PWY-5080;
metacyc_pathway_name unsaturated, even numbered fatty acid β-oxidation;; very long chain fatty acid biosynthesis I;;
metacyc_pathway_type Fatty-Acid-Degradation;; Fatty-acid-biosynthesis;;
pfam_acc PF01575; PF13452;
pfam_desc MaoC like domain; N-terminal half of MaoC dehydratase;
pfam_id MaoC_dehydratas; MaoC_dehydrat_N;
pfam_target db:Pfam-A.hmm|PF01575.19 evalue:7e-23 score:79.7 best_domain_score:79.5 name:MaoC_dehydratas; db:Pfam-A.hmm|PF13452.6 evalue:5.8e-07 score:29.0 best_domain_score:28.4 name:MaoC_dehydrat_N;
sprot_desc (R)-specific enoyl-CoA hydratase;
sprot_id sp|Q2RQ36|PHAJ_RHORT;
sprot_target db:uniprot_sprot|sp|Q2RQ36|PHAJ_RHORT 18 149 evalue:5.0e-33 qcov:86.80 identity:53.80;
17512 16631 CDS
ID metaerg.pl|08834
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481546.1 1 293 evalue:9.4e-130 qcov:100.00 identity:76.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00702; PF13344; PF13242;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id Hydrolase; Hydrolase_6; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF00702.26 evalue:7.2e-07 score:28.9 best_domain_score:15.2 name:Hydrolase; db:Pfam-A.hmm|PF13344.6 evalue:5.9e-13 score:48.0 best_domain_score:47.1 name:Hydrolase_6; db:Pfam-A.hmm|PF13242.6 evalue:8.4e-10 score:37.8 best_domain_score:36.6 name:Hydrolase_like;
tigrfam_acc TIGR01459; TIGR01460;
tigrfam_desc HAD hydrolase, TIGR01459 family; HAD hydrolase, family IIA;
tigrfam_mainrole Unknown function;
tigrfam_name HAD-SF-IIA-hyp4; HAD-SF-IIA;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01459 evalue:4.2e-43 score:146.6 best_domain_score:144.7 name:TIGR01459; db:TIGRFAMs.hmm|TIGR01460 evalue:5.9e-31 score:107.3 best_domain_score:106.7 name:TIGR01460;
18426 17509 CDS
ID metaerg.pl|08835
allec_ids 3.6.1.1;
allgo_ids GO:0005737; GO:0016462; GO:0004309; GO:0004427; GO:0030145; GO:0006798;
allko_ids K15986;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481545.1 1 304 evalue:2.6e-146 qcov:99.70 identity:87.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF01368; PF02833;
pfam_desc DHH family; DHHA2 domain;
pfam_id DHH; DHHA2;
pfam_target db:Pfam-A.hmm|PF01368.20 evalue:3.6e-14 score:52.1 best_domain_score:51.4 name:DHH; db:Pfam-A.hmm|PF02833.14 evalue:9.3e-17 score:60.8 best_domain_score:60.4 name:DHHA2;
sprot_desc Probable manganese-dependent inorganic pyrophosphatase;
sprot_id sp|Q9RRB7|PPAC_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RRB7|PPAC_DEIRA 1 303 evalue:4.1e-50 qcov:99.30 identity:41.10;
18583 20532 CDS
ID metaerg.pl|08836
allgo_ids GO:0000155; GO:0007165;
allko_ids K14509; K11520; K07769; K12767; K11383; K02486; K10125; K11629; K11357; K04757; K13040; K10942; K07647; K07675; K07717; K01769; K06379; K10681; K07676; K07650; K07709; K13532; K07644; K02480; K08801; K02482; K14489; K07636; K07653; K07638; K11527; K02030; K13587; K10715; K07678; K03388; K02668; K10916; K07674; K08479; K07716; K02489; K07697; K07656; K01768; K07640; K07710; K07645; K07708; K07677; K08282; K10909; K07704; K07643; K11231; K02491; K11711; K07642; K02484; K11640; K11356; K11633; K07768; K07778; K07683; K11354; K13533; K11328; K00873; K07711; K08884; K07648; K07679; K02478; K07718; K07698; K07651; K11623; K07682; K00936; K07649; K07777; K07654; K07637; K03407; K07639; K08475; K07673; K07641; K13598; K07646; K07652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092885494.1 5 616 evalue:1.5e-132 qcov:94.30 identity:45.90;
kegg_pathway_id 00710; 00010; 00230; 05111; 00620; 03090; 02020; 04011; 00790;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF02518; PF00512; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:4.7e-29 score:100.4 best_domain_score:96.9 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.4e-17 score:62.7 best_domain_score:62.7 name:HisKA; db:Pfam-A.hmm|PF00072.24 evalue:1.7e-15 score:56.4 best_domain_score:55.2 name:Response_reg;
tm_num 6;
18583 20532 transmembrane_helix
ID metaerg.pl|08837
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o18592-18660i18697-18765o18793-18861i18946-19002o19030-19098i19111-19179o;
20661 20948 CDS
ID metaerg.pl|08838
allgo_ids GO:0006457; GO:0005737; GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sp002294185;
genomedb_acc GCA_002294185.1;
genomedb_target db:genomedb|GCA_002294185.1|DBFD01000044.1_32 1 95 evalue:1.7e-43 qcov:100.00 identity:95.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00166;
pfam_desc Chaperonin 10 Kd subunit;
pfam_id Cpn10;
pfam_target db:Pfam-A.hmm|PF00166.21 evalue:2.5e-35 score:119.6 best_domain_score:119.5 name:Cpn10;
sprot_desc 10 kDa chaperonin;
sprot_id sp|Q9Z463|CH10_PARDE;
sprot_target db:uniprot_sprot|sp|Q9Z463|CH10_PARDE 1 95 evalue:4.7e-45 qcov:100.00 identity:94.70;
20994 22646 CDS
ID metaerg.pl|08839
allgo_ids GO:0005524; GO:0005737; GO:0051082; GO:0042026;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071471030.1 1 550 evalue:3.7e-281 qcov:100.00 identity:94.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00118;
pfam_desc TCP-1/cpn60 chaperonin family;
pfam_id Cpn60_TCP1;
pfam_target db:Pfam-A.hmm|PF00118.24 evalue:3.9e-100 score:335.0 best_domain_score:334.3 name:Cpn60_TCP1;
sprot_desc 60 kDa chaperonin;
sprot_id sp|Q9Z462|CH60_PARDE;
sprot_target db:uniprot_sprot|sp|Q9Z462|CH60_PARDE 1 535 evalue:5.5e-263 qcov:97.30 identity:89.50;
tigrfam_acc TIGR02348;
tigrfam_desc chaperonin GroL;
tigrfam_mainrole Protein fate;
tigrfam_name GroEL;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR02348 evalue:1.4e-262 score:871.0 best_domain_score:870.8 name:TIGR02348;
22956 22732 CDS
ID metaerg.pl|08840
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797599.1 1 74 evalue:1.5e-23 qcov:100.00 identity:74.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF06620;
pfam_desc Protein of unknown function (DUF1150);
pfam_id DUF1150;
pfam_target db:Pfam-A.hmm|PF06620.11 evalue:8.1e-20 score:70.0 best_domain_score:69.8 name:DUF1150;
23387 22971 CDS
ID metaerg.pl|08841
allko_ids K04080;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071471028.1 1 137 evalue:9.1e-59 qcov:99.30 identity:81.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00011;
pfam_desc Hsp20/alpha crystallin family;
pfam_id HSP20;
pfam_target db:Pfam-A.hmm|PF00011.21 evalue:3.1e-18 score:65.0 best_domain_score:64.7 name:HSP20;
sprot_desc Small heat shock protein HspH;
sprot_id sp|O86110|HSPH_BRADU;
sprot_target db:uniprot_sprot|sp|O86110|HSPH_BRADU 13 127 evalue:6.0e-25 qcov:83.30 identity:49.60;
23574 23792 CDS
ID metaerg.pl|08842
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071471104.1 1 72 evalue:7.4e-20 qcov:100.00 identity:79.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF04325;
pfam_desc Protein of unknown function (DUF465);
pfam_id DUF465;
pfam_target db:Pfam-A.hmm|PF04325.13 evalue:5.8e-17 score:60.7 best_domain_score:60.1 name:DUF465;
23853 24341 CDS
ID metaerg.pl|08843
allec_ids 5.4.99.18; 4.1.1.21;
allgo_ids GO:0006189; GO:0034023;
allko_ids K01588;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071471027.1 1 162 evalue:2.9e-72 qcov:100.00 identity:87.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id PWY-6123; PWY-841; PRPP-PWY; PWY-6124; DENOVOPURINE2-PWY;
metacyc_pathway_name inosine-5'-phosphate biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; inosine-5'-phosphate biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type IMP-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; IMP-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00731;
pfam_desc AIR carboxylase;
pfam_id AIRC;
pfam_target db:Pfam-A.hmm|PF00731.20 evalue:6.6e-63 score:210.0 best_domain_score:209.8 name:AIRC;
sprot_desc N5-carboxyaminoimidazole ribonucleotide mutase;
sprot_id sp|P52558|PURE_BRUME;
sprot_target db:uniprot_sprot|sp|P52558|PURE_BRUME 4 162 evalue:1.8e-49 qcov:98.10 identity:64.80;
tigrfam_acc TIGR01162;
tigrfam_desc phosphoribosylaminoimidazole carboxylase, catalytic subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purE;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01162 evalue:1.5e-61 score:205.7 best_domain_score:205.5 name:TIGR01162;
24334 25401 CDS
ID metaerg.pl|08844
allec_ids 6.3.4.18; 4.1.1.21;
allgo_ids GO:0005524; GO:0034028; GO:0046872; GO:0004638; GO:0006189;
allko_ids K01589;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797603.1 1 355 evalue:2.3e-159 qcov:100.00 identity:79.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6124; PRPP-PWY; PWY-841; PWY-6123;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; inosine-5'-phosphate biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; inosine-5'-phosphate biosynthesis I;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;;
pfam_acc PF02222; PF02786; PF17769;
pfam_desc ATP-grasp domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; Phosphoribosylaminoimidazole carboxylase C-terminal domain;
pfam_id ATP-grasp; CPSase_L_D2; PurK_C;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:2.5e-55 score:185.9 best_domain_score:185.4 name:ATP-grasp; db:Pfam-A.hmm|PF02786.17 evalue:0.00015 score:20.6 best_domain_score:19.7 name:CPSase_L_D2; db:Pfam-A.hmm|PF17769.1 evalue:1e-14 score:53.2 best_domain_score:52.0 name:PurK_C;
sprot_desc N5-carboxyaminoimidazole ribonucleotide synthase;
sprot_id sp|P52559|PURK_BRUME;
sprot_target db:uniprot_sprot|sp|P52559|PURK_BRUME 5 353 evalue:1.5e-99 qcov:98.30 identity:55.40;
tigrfam_acc TIGR01161;
tigrfam_desc phosphoribosylaminoimidazole carboxylase, ATPase subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purK;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01161 evalue:5.7e-111 score:370.4 best_domain_score:370.3 name:TIGR01161;
26131 25409 CDS
ID metaerg.pl|08845
allgo_ids GO:0098599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482227.1 1 240 evalue:5.2e-118 qcov:100.00 identity:87.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF02089;
pfam_desc Palmitoyl protein thioesterase;
pfam_id Palm_thioest;
pfam_target db:Pfam-A.hmm|PF02089.15 evalue:2e-06 score:27.0 best_domain_score:26.7 name:Palm_thioest;
sp YES;
25409 25459 signal_peptide
ID metaerg.pl|08846
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
26184 26639 CDS
ID metaerg.pl|08847
allgo_ids GO:0016787;
allko_ids K03574;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797743.1 1 151 evalue:5.4e-65 qcov:100.00 identity:76.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:3.8e-12 score:45.6 best_domain_score:45.4 name:NUDIX;
27577 26636 CDS
ID metaerg.pl|08848
allec_ids 1.8.1.9;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0004791; GO:0019430;
allko_ids K00384; K00382; K00266;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797605.1 1 312 evalue:4.9e-161 qcov:99.70 identity:90.10;
kegg_pathway_id 00020; 00240; 00260; 00280; 00010; 00251; 00252; 00620; 00910;
kegg_pathway_name Citrate cycle (TCA cycle); Pyrimidine metabolism; Glycine, serine and threonine metabolism; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Glutamate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id THIOREDOX-PWY;
metacyc_pathway_name thioredoxin pathway;;
metacyc_pathway_type Reductants;;
pfam_acc PF00890; PF00070; PF07992; PF13738;
pfam_desc FAD binding domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id FAD_binding_2; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:1.2e-06 score:27.1 best_domain_score:11.7 name:FAD_binding_2; db:Pfam-A.hmm|PF00070.27 evalue:1.1e-16 score:60.3 best_domain_score:58.7 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:3.9e-47 score:160.1 best_domain_score:159.9 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:5.2e-19 score:67.8 best_domain_score:59.1 name:Pyr_redox_3;
sprot_desc Thioredoxin reductase;
sprot_id sp|P39916|TRXB_COXBU;
sprot_target db:uniprot_sprot|sp|P39916|TRXB_COXBU 1 309 evalue:1.9e-103 qcov:98.70 identity:57.70;
tigrfam_acc TIGR01292;
tigrfam_desc thioredoxin-disulfide reductase;
tigrfam_mainrole Energy metabolism;
tigrfam_name TRX_reduct;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01292 evalue:4.4e-119 score:395.9 best_domain_score:395.7 name:TIGR01292;
27745 28245 CDS
ID metaerg.pl|08849
allgo_ids GO:0043565; GO:0003700;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481301.1 1 166 evalue:2.7e-81 qcov:100.00 identity:92.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF01037; PF12840; PF13412; PF13404; PF01047;
pfam_desc Lrp/AsnC ligand binding domain; Helix-turn-helix domain; Winged helix-turn-helix DNA-binding; AsnC-type helix-turn-helix domain; MarR family;
pfam_id AsnC_trans_reg; HTH_20; HTH_24; HTH_AsnC-type; MarR;
pfam_target db:Pfam-A.hmm|PF01037.21 evalue:1.3e-17 score:62.8 best_domain_score:61.8 name:AsnC_trans_reg; db:Pfam-A.hmm|PF12840.7 evalue:1.6e-06 score:27.3 best_domain_score:26.5 name:HTH_20; db:Pfam-A.hmm|PF13412.6 evalue:1.2e-20 score:72.0 best_domain_score:71.4 name:HTH_24; db:Pfam-A.hmm|PF13404.6 evalue:6.5e-18 score:63.5 best_domain_score:62.8 name:HTH_AsnC-type; db:Pfam-A.hmm|PF01047.22 evalue:4.9e-06 score:25.6 best_domain_score:25.0 name:MarR;
sprot_desc Leucine-responsive regulatory protein;
sprot_id sp|P56901|LRP_RHIME;
sprot_target db:uniprot_sprot|sp|P56901|LRP_RHIME 5 148 evalue:3.1e-44 qcov:86.70 identity:62.50;
29578 28268 CDS
ID metaerg.pl|08850
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797744.1 1 436 evalue:5.0e-220 qcov:100.00 identity:88.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
30135 29632 CDS
ID metaerg.pl|08851
allgo_ids GO:0004190; GO:0016020;
allko_ids K07497; K02278; K02654;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797607.1 1 167 evalue:1.1e-69 qcov:100.00 identity:82.60;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF01478;
pfam_desc Type IV leader peptidase family;
pfam_id Peptidase_A24;
pfam_target db:Pfam-A.hmm|PF01478.18 evalue:1.9e-08 score:33.9 best_domain_score:33.9 name:Peptidase_A24;
tm_num 5;
30135 29632 transmembrane_helix
ID metaerg.pl|08852
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o29644-29703i29740-29793o29806-29874i29911-29979o30055-30123i;
30989 30141 CDS
ID metaerg.pl|08853
allgo_ids GO:0042802;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797745.1 1 280 evalue:1.3e-128 qcov:99.30 identity:84.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF13424; PF13428; PF13432; PF14559; PF07719; PF07721; PF13174;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_12; TPR_14; TPR_16; TPR_19; TPR_2; TPR_4; TPR_6;
pfam_target db:Pfam-A.hmm|PF13424.6 evalue:1e-11 score:44.2 best_domain_score:13.5 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:9.2e-17 score:59.6 best_domain_score:17.5 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:1.5e-12 score:47.2 best_domain_score:19.7 name:TPR_16; db:Pfam-A.hmm|PF14559.6 evalue:1.2e-19 score:69.8 best_domain_score:23.1 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:2e-15 score:54.8 best_domain_score:20.3 name:TPR_2; db:Pfam-A.hmm|PF07721.14 evalue:2.6e-09 score:36.1 best_domain_score:12.9 name:TPR_4; db:Pfam-A.hmm|PF13174.6 evalue:7.9e-09 score:34.9 best_domain_score:9.8 name:TPR_6;
sp YES;
tigrfam_acc TIGR00756;
tigrfam_desc pentatricopeptide repeat domain;
tigrfam_name PPR;
tigrfam_target db:TIGRFAMs.hmm|TIGR00756 evalue:0.006 score:15.8 best_domain_score:5.5 name:TIGR00756;
30141 30194 lipoprotein_signal_peptide
ID metaerg.pl|08854
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
31595 31011 CDS
ID metaerg.pl|08855
allgo_ids GO:0005515;
allko_ids K08884;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797746.1 15 194 evalue:2.2e-74 qcov:92.80 identity:79.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00515; PF13414; PF13424; PF13428; PF13432; PF13431; PF07719;
pfam_desc Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_2;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:1.7e-10 score:39.5 best_domain_score:17.2 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:7.1e-09 score:34.5 best_domain_score:21.9 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:1.8e-07 score:30.6 best_domain_score:18.1 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:2.8e-05 score:23.8 best_domain_score:15.3 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:9.3e-09 score:35.0 best_domain_score:25.4 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:5.5e-06 score:25.7 best_domain_score:19.9 name:TPR_17; db:Pfam-A.hmm|PF07719.17 evalue:4.2e-12 score:44.5 best_domain_score:18.6 name:TPR_2;
sp YES;
31011 31055 lipoprotein_signal_peptide
ID metaerg.pl|08856
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
32575 31598 CDS
ID metaerg.pl|08857
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797608.1 1 325 evalue:2.3e-129 qcov:100.00 identity:77.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00482;
pfam_desc Type II secretion system (T2SS), protein F;
pfam_id T2SSF;
pfam_target db:Pfam-A.hmm|PF00482.23 evalue:2.3e-21 score:75.3 best_domain_score:75.3 name:T2SSF;
tm_num 4;
32575 31598 transmembrane_helix
ID metaerg.pl|08858
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o31625-31693i31916-31984o32012-32065i32468-32536o;
33586 32618 CDS
ID metaerg.pl|08859
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797609.1 1 322 evalue:2.1e-146 qcov:100.00 identity:83.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00482;
pfam_desc Type II secretion system (T2SS), protein F;
pfam_id T2SSF;
pfam_target db:Pfam-A.hmm|PF00482.23 evalue:3.4e-16 score:58.6 best_domain_score:58.6 name:T2SSF;
tm_num 5;
33586 32618 transmembrane_helix
ID metaerg.pl|08860
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o32645-32713i32888-32956o32966-33025i33404-33463o33491-33559i;
35038 33590 CDS
ID metaerg.pl|08861
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797610.1 1 482 evalue:2.4e-231 qcov:100.00 identity:86.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00437;
pfam_desc Type II/IV secretion system protein;
pfam_id T2SSE;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:3.6e-83 score:278.0 best_domain_score:278.0 name:T2SSE;
36286 35057 CDS
ID metaerg.pl|08862
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797747.1 1 409 evalue:8.9e-187 qcov:100.00 identity:83.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF13614; PF10609;
pfam_desc AAA domain; NUBPL iron-transfer P-loop NTPase;
pfam_id AAA_31; ParA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:2.9e-11 score:42.8 best_domain_score:42.0 name:AAA_31; db:Pfam-A.hmm|PF10609.9 evalue:1.9e-09 score:36.6 best_domain_score:22.5 name:ParA;
37212 36586 CDS
ID metaerg.pl|08863
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482221.1 1 208 evalue:1.1e-81 qcov:100.00 identity:75.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00691;
pfam_desc OmpA family;
pfam_id OmpA;
pfam_target db:Pfam-A.hmm|PF00691.20 evalue:2.3e-20 score:72.0 best_domain_score:71.5 name:OmpA;
sp YES;
36586 36660 signal_peptide
ID metaerg.pl|08864
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
38632 37250 CDS
ID metaerg.pl|08865
allgo_ids GO:0009306;
allko_ids K02280;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797612.1 1 460 evalue:1.8e-196 qcov:100.00 identity:77.80;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF04972; PF00263; PF13629;
pfam_desc BON domain; Bacterial type II and III secretion system protein; Pilus formation protein N terminal region;
pfam_id BON; Secretin; T2SS-T3SS_pil_N;
pfam_target db:Pfam-A.hmm|PF04972.17 evalue:8.9e-07 score:28.4 best_domain_score:26.8 name:BON; db:Pfam-A.hmm|PF00263.21 evalue:4.1e-46 score:156.0 best_domain_score:154.5 name:Secretin; db:Pfam-A.hmm|PF13629.6 evalue:4.2e-17 score:60.9 best_domain_score:60.9 name:T2SS-T3SS_pil_N;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P55702|Y4XJ_SINFN;
sprot_target db:uniprot_sprot|sp|P55702|Y4XJ_SINFN 30 423 evalue:2.7e-61 qcov:85.70 identity:38.90;
37250 37327 signal_peptide
ID metaerg.pl|08866
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
39763 38933 CDS
ID metaerg.pl|08867
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797613.1 1 276 evalue:5.7e-113 qcov:100.00 identity:75.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF16976;
pfam_desc Flp pilus assembly protein RcpC/CpaB;
pfam_id RcpC;
pfam_target db:Pfam-A.hmm|PF16976.5 evalue:1.5e-27 score:95.1 best_domain_score:94.1 name:RcpC;
sp YES;
tigrfam_acc TIGR03177;
tigrfam_desc Flp pilus assembly protein CpaB;
tigrfam_name pilus_cpaB;
tigrfam_target db:TIGRFAMs.hmm|TIGR03177 evalue:3.9e-61 score:205.7 best_domain_score:205.5 name:TIGR03177;
tm_num 1;
38933 39007 signal_peptide
ID metaerg.pl|08868
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
39763 38933 transmembrane_helix
ID metaerg.pl|08869
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i38945-39013o;
40084 39893 CDS
ID metaerg.pl|08870
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797614.1 7 63 evalue:3.7e-07 qcov:90.50 identity:57.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
tm_num 1;
40084 39893 transmembrane_helix
ID metaerg.pl|08871
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o39935-40003i;
40402 40184 CDS
ID metaerg.pl|08872
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072244441.1 1 70 evalue:6.5e-16 qcov:97.20 identity:73.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
tm_num 1;
40402 40184 transmembrane_helix
ID metaerg.pl|08873
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o40235-40303i;
40754 41608 CDS
ID metaerg.pl|08874
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797616.1 8 284 evalue:9.7e-116 qcov:97.50 identity:78.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF01464;
pfam_desc Transglycosylase SLT domain;
pfam_id SLT;
pfam_target db:Pfam-A.hmm|PF01464.20 evalue:1.1e-25 score:88.7 best_domain_score:88.3 name:SLT;
sp YES;
40754 40837 signal_peptide
ID metaerg.pl|08875
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
42256 41627 CDS
ID metaerg.pl|08876
allec_ids 2.8.3.5; 2.8.3.-;
allgo_ids GO:0008410; GO:0008260; GO:0009103;
allko_ids K01029;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797617.1 1 209 evalue:4.2e-108 qcov:100.00 identity:96.70;
kegg_pathway_id 00650; 00072; 00280;
kegg_pathway_name Butanoate metabolism; Synthesis and degradation of ketone bodies; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id PROPFERM-PWY; PWY0-43; ACETOACETATE-DEG-PWY; P108-PWY; P3-PWY; PWY66-368; CARNMET-PWY; REDCITCYC;
metacyc_pathway_name L-alanine fermentation to propanoate and acetate;; conversion of succinate to propanoate;; acetoacetate degradation (to acetyl CoA);; pyruvate fermentation to propanoate I;; gallate degradation III (anaerobic);; ketolysis;; L-carnitine degradation I;; TCA cycle VIII (Helicobacter);;
metacyc_pathway_type Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;; SUCC-DEG;; Fatty-Acid-and-Lipid-Degradation;; Pyruvate-Propanoate-Fermentation;; GALLATE-DEG;; OTHER-ENERGY;; CARN-DEG;; TCA-VARIANTS;;
pfam_acc PF01144;
pfam_desc Coenzyme A transferase;
pfam_id CoA_trans;
pfam_target db:Pfam-A.hmm|PF01144.23 evalue:2.5e-40 score:137.4 best_domain_score:137.2 name:CoA_trans;
sprot_desc Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B;
sprot_id sp|B0RVK3|SCOB_XANCB;
sprot_target db:uniprot_sprot|sp|B0RVK3|SCOB_XANCB 1 208 evalue:5.6e-75 qcov:99.50 identity:67.30;
tigrfam_acc TIGR02428;
tigrfam_desc 3-oxoacid CoA-transferase, B subunit;
tigrfam_name pcaJ_scoB_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR02428 evalue:9.8e-99 score:328.0 best_domain_score:327.9 name:TIGR02428;
42965 42270 CDS
ID metaerg.pl|08877
allec_ids 2.8.3.5; 2.8.3.-;
allgo_ids GO:0008410; GO:0008260;
allko_ids K01027; K01028; K01029; K01041;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797618.1 1 231 evalue:1.2e-124 qcov:100.00 identity:96.10;
kegg_pathway_id 00624; 00280; 00281; 00072; 00650;
kegg_pathway_name 1- and 2-Methylnaphthalene degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Synthesis and degradation of ketone bodies; Butanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id P108-PWY; P3-PWY; CARNMET-PWY; PWY66-368; REDCITCYC; PWY0-43; PROPFERM-PWY; ACETOACETATE-DEG-PWY;
metacyc_pathway_name pyruvate fermentation to propanoate I;; gallate degradation III (anaerobic);; L-carnitine degradation I;; ketolysis;; TCA cycle VIII (Helicobacter);; conversion of succinate to propanoate;; L-alanine fermentation to propanoate and acetate;; acetoacetate degradation (to acetyl CoA);;
metacyc_pathway_type Pyruvate-Propanoate-Fermentation;; GALLATE-DEG;; CARN-DEG;; OTHER-ENERGY;; TCA-VARIANTS;; SUCC-DEG;; Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;; Fatty-Acid-and-Lipid-Degradation;;
pfam_acc PF01144;
pfam_desc Coenzyme A transferase;
pfam_id CoA_trans;
pfam_target db:Pfam-A.hmm|PF01144.23 evalue:2.1e-73 score:245.5 best_domain_score:245.4 name:CoA_trans;
sprot_desc Probable succinyl-CoA:3-ketoacid coenzyme A transferase subunit A;
sprot_id sp|P42315|SCOA_BACSU;
sprot_target db:uniprot_sprot|sp|P42315|SCOA_BACSU 1 231 evalue:7.1e-87 qcov:100.00 identity:69.80;
tigrfam_acc TIGR02429;
tigrfam_desc 3-oxoacid CoA-transferase, A subunit;
tigrfam_name pcaI_scoA_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR02429 evalue:2e-67 score:226.0 best_domain_score:225.8 name:TIGR02429;
tm_num 1;
42965 42270 transmembrane_helix
ID metaerg.pl|08878
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o42312-42380i;
45634 43046 CDS
ID metaerg.pl|08879
allec_ids 5.6.2.2; 5.99.1.2;
allgo_ids GO:0003677; GO:0003916; GO:0006265; GO:0005694; GO:0003917; GO:0046872;
allko_ids K03168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797619.1 1 858 evalue:0.0e+00 qcov:99.50 identity:91.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF01131; PF01751; PF13368; PF01396;
pfam_desc DNA topoisomerase; Toprim domain; Topoisomerase C-terminal repeat; Topoisomerase DNA binding C4 zinc finger;
pfam_id Topoisom_bac; Toprim; Toprim_C_rpt; zf-C4_Topoisom;
pfam_target db:Pfam-A.hmm|PF01131.20 evalue:3.1e-126 score:420.9 best_domain_score:420.3 name:Topoisom_bac; db:Pfam-A.hmm|PF01751.22 evalue:4.7e-24 score:83.8 best_domain_score:82.8 name:Toprim; db:Pfam-A.hmm|PF13368.6 evalue:4.1e-57 score:189.3 best_domain_score:72.1 name:Toprim_C_rpt; db:Pfam-A.hmm|PF01396.19 evalue:2.1e-14 score:52.2 best_domain_score:49.7 name:zf-C4_Topoisom;
sprot_desc DNA topoisomerase 1;
sprot_id sp|Q9X3X7|TOP1_ZYMMO;
sprot_target db:uniprot_sprot|sp|Q9X3X7|TOP1_ZYMMO 1 821 evalue:7.6e-211 qcov:95.20 identity:40.20;
tigrfam_acc TIGR01051;
tigrfam_desc DNA topoisomerase I;
tigrfam_mainrole DNA metabolism;
tigrfam_name topA_bact;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01051 evalue:3.9e-224 score:745.4 best_domain_score:743.6 name:TIGR01051;
46899 45769 CDS
ID metaerg.pl|08880
allgo_ids GO:0009294;
allko_ids K04096;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797620.1 1 376 evalue:7.9e-174 qcov:100.00 identity:83.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF02481; PF17782;
pfam_desc DNA recombination-mediator protein A; DprA winged helix domain;
pfam_id DNA_processg_A; DprA_WH;
pfam_target db:Pfam-A.hmm|PF02481.15 evalue:1e-67 score:226.7 best_domain_score:226.3 name:DNA_processg_A; db:Pfam-A.hmm|PF17782.1 evalue:8.6e-20 score:69.9 best_domain_score:68.2 name:DprA_WH;
sprot_desc DNA-processing protein A;
sprot_id sp|P43862|DPRA_HAEIN;
sprot_target db:uniprot_sprot|sp|P43862|DPRA_HAEIN 82 365 evalue:1.4e-36 qcov:75.50 identity:35.00;
tigrfam_acc TIGR00732;
tigrfam_desc DNA protecting protein DprA;
tigrfam_mainrole Cellular processes;
tigrfam_name dprA;
tigrfam_sub1role DNA transformation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00732 evalue:1.4e-63 score:213.2 best_domain_score:212.9 name:TIGR00732;
48434 47013 CDS
ID metaerg.pl|08881
allec_ids 3.4.-.-;
allgo_ids GO:0006508; GO:0008237;
allko_ids K03568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797748.1 1 473 evalue:9.2e-244 qcov:100.00 identity:90.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF01523;
pfam_desc Putative modulator of DNA gyrase;
pfam_id PmbA_TldD;
pfam_target db:Pfam-A.hmm|PF01523.16 evalue:4.7e-61 score:206.3 best_domain_score:206.0 name:PmbA_TldD;
sprot_desc Metalloprotease TldD;
sprot_id sp|P0AGG9|TLDD_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AGG9|TLDD_ECOL6 30 472 evalue:8.3e-135 qcov:93.70 identity:54.50;
48661 49533 CDS
ID metaerg.pl|08882
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0005507; GO:0016020; GO:0016021; GO:0005886; GO:0070469;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482218.1 1 289 evalue:1.6e-142 qcov:99.70 identity:86.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metabolic_acc TIGR02866;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, caa3-type;gene:CoxB;;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00116; PF02790;
pfam_desc Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain;
pfam_id COX2; COX2_TM;
pfam_target db:Pfam-A.hmm|PF00116.20 evalue:9.7e-46 score:153.8 best_domain_score:153.2 name:COX2; db:Pfam-A.hmm|PF02790.15 evalue:2.6e-18 score:65.2 best_domain_score:64.3 name:COX2_TM;
sp YES;
sprot_desc Cytochrome c oxidase subunit 2;
sprot_id sp|P08306|COX2_PARDE;
sprot_target db:uniprot_sprot|sp|P08306|COX2_PARDE 5 290 evalue:1.8e-79 qcov:98.60 identity:53.40;
tigrfam_acc TIGR02866;
tigrfam_desc cytochrome c oxidase, subunit II;
tigrfam_mainrole Energy metabolism;
tigrfam_name CoxB;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02866 evalue:1.4e-55 score:187.2 best_domain_score:186.8 name:TIGR02866;
tm_num 2;
48661 48732 signal_peptide
ID metaerg.pl|08883
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
48661 49533 transmembrane_helix
ID metaerg.pl|08884
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o48841-48909i48967-49035o;
49567 50541 CDS
ID metaerg.pl|08885
allec_ids 2.5.1.141; 2.5.1.-;
allgo_ids GO:0016021; GO:0016765; GO:0005886; GO:0008495; GO:0048034;
allko_ids K02301; K02257;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797622.1 1 324 evalue:5.6e-152 qcov:100.00 identity:84.90;
kegg_pathway_id 00860; 00190;
kegg_pathway_name Porphyrin and chlorophyll metabolism; Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metabolic_acc TIGR01473;
metabolic_process compound:Oxygen;process:Cytochrome (quinone) oxidase, bo type;gene:CyoE;;
metabolic_target db:metabolic.hmm|TIGR01473 evalue:3e-100 score:334.7 best_domain_score:334.6 name:TIGR01473;
metacyc_pathway_id PWY-5861; PWY-724; PWY-6262; POLYISOPRENSYN-PWY; PWY-5805; PWY-5783; PWY-5132; PWY-5808; PWY-5897; PWY-6263; PWY-5816; PWY-5863; PWY-5898; PWY-5068; PWY-2681; PWY-5896; PWY-5845; PWY-5862; PWY-5140; PWY-5701; PWY-5806; PWY-6404; PWY-5135; PWY-5899; PWY-5838; PWY-5064; PWY-4502; PWY-5134; PWY-6520; PWY-5817; PWY-6403; PWY-5133; PWY-5864; PWY-6129; PWY-6383; PWY-5893; PWY-5027;
metacyc_pathway_name superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; demethylmenaquinol-8 biosynthesis II;; polyisoprenoid biosynthesis (E. coli);; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; lupulone and humulone biosynthesis;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-12 biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; cannabinoid biosynthesis;; shikonin biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; xanthohumol biosynthesis;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; tridecaprenyl diphosphate biosynthesis;; phylloquinol biosynthesis;;
metacyc_pathway_type Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; TERPENOPHENOLICS-SYN;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Polyprenyl-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; PRENYLFLAVONOID-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;;
pfam_acc PF01040;
pfam_desc UbiA prenyltransferase family;
pfam_id UbiA;
pfam_target db:Pfam-A.hmm|PF01040.18 evalue:1.5e-60 score:203.9 best_domain_score:203.5 name:UbiA;
sprot_desc Protoheme IX farnesyltransferase;
sprot_id sp|A8LHT6|COXX_DINSH;
sprot_target db:uniprot_sprot|sp|A8LHT6|COXX_DINSH 1 302 evalue:1.3e-126 qcov:93.20 identity:76.50;
tigrfam_acc TIGR01473;
tigrfam_desc protoheme IX farnesyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cyoE_ctaB;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01473 evalue:3e-100 score:334.7 best_domain_score:334.6 name:TIGR01473;
tm_num 9;
49567 50541 transmembrane_helix
ID metaerg.pl|08886
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i49627-49695o49723-49788i49849-49917o49927-49995i50014-50082o50092-50160i50218-50286o50296-50364i50425-50493o;
50541 50741 CDS
ID metaerg.pl|08887
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797623.1 1 66 evalue:8.3e-26 qcov:100.00 identity:89.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
sprot_desc hypothetical protein;
sprot_id sp|P08302|YCO2_PARDE;
sprot_target db:uniprot_sprot|sp|P08302|YCO2_PARDE 6 59 evalue:1.2e-10 qcov:81.80 identity:52.60;
tm_num 1;
50541 50741 transmembrane_helix
ID metaerg.pl|08888
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i50589-50657o;
50738 51319 CDS
ID metaerg.pl|08889
allgo_ids GO:0005507; GO:0016021; GO:0005886; GO:0008535;
allko_ids K02258;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797750.1 2 193 evalue:1.9e-94 qcov:99.50 identity:86.50;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF04442;
pfam_desc Cytochrome c oxidase assembly protein CtaG/Cox11;
pfam_id CtaG_Cox11;
pfam_target db:Pfam-A.hmm|PF04442.14 evalue:8.3e-53 score:177.7 best_domain_score:177.4 name:CtaG_Cox11;
sprot_desc Cytochrome c oxidase assembly protein CtaG;
sprot_id sp|Q5LNX9|COXZ_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LNX9|COXZ_RUEPO 8 193 evalue:3.5e-63 qcov:96.40 identity:62.00;
tm_num 1;
50738 51319 transmembrane_helix
ID metaerg.pl|08890
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i50792-50845o;
51364 52167 CDS
ID metaerg.pl|08891
allec_ids 1.9.3.1;
allgo_ids GO:0015002; GO:0016020; GO:0016021; GO:0005886; GO:0004129; GO:0019646;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470860.1 1 267 evalue:2.9e-146 qcov:100.00 identity:92.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00510;
pfam_desc Cytochrome c oxidase subunit III;
pfam_id COX3;
pfam_target db:Pfam-A.hmm|PF00510.18 evalue:1.7e-82 score:276.4 best_domain_score:276.3 name:COX3;
sprot_desc Cytochrome c oxidase subunit 3;
sprot_id sp|P06030|COX3_PARDE;
sprot_target db:uniprot_sprot|sp|P06030|COX3_PARDE 1 266 evalue:5.6e-88 qcov:99.60 identity:60.30;
tm_num 7;
51364 52167 transmembrane_helix
ID metaerg.pl|08892
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i51400-51468o51481-51540i51598-51666o51724-51792i51853-51921o51964-52032i52093-52161o;
52257 52940 CDS
ID metaerg.pl|08893
allgo_ids GO:0016020; GO:0016021; GO:0005743; GO:0005739; GO:0051082; GO:0033617;
allko_ids K14998;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797625.1 1 227 evalue:1.6e-97 qcov:100.00 identity:79.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF02104;
pfam_desc SURF1 family;
pfam_id SURF1;
pfam_target db:Pfam-A.hmm|PF02104.15 evalue:4.4e-32 score:111.0 best_domain_score:110.8 name:SURF1;
sprot_desc Cytochrome oxidase assembly protein shy1;
sprot_id sp|Q9Y810|SHY1_SCHPO;
sprot_target db:uniprot_sprot|sp|Q9Y810|SHY1_SCHPO 10 221 evalue:2.2e-08 qcov:93.40 identity:26.50;
tm_num 2;
52257 52940 transmembrane_helix
ID metaerg.pl|08894
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i52269-52337o52854-52922i;
52955 54343 CDS
ID metaerg.pl|08895
allec_ids 4.2.3.1;
allgo_ids GO:0030170; GO:0004795; GO:0009088;
allko_ids K01733;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797751.1 1 462 evalue:1.5e-230 qcov:100.00 identity:87.90;
kegg_pathway_id 00260; 00750;
kegg_pathway_name Glycine, serine and threonine metabolism; Vitamin B6 metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id P4-PWY; PWY-3001; HOMOSER-THRESYN-PWY; PWY0-781; THRESYN-PWY; PWY-724;
metacyc_pathway_name superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-isoleucine biosynthesis I;; L-threonine biosynthesis;; aspartate superpathway;; superpathway of L-threonine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; THREONINE-BIOSYNTHESIS;; Super-Pathways;; Super-Pathways; THREONINE-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00291; PF14821;
pfam_desc Pyridoxal-phosphate dependent enzyme; Threonine synthase N terminus;
pfam_id PALP; Thr_synth_N;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:5.3e-20 score:71.2 best_domain_score:64.8 name:PALP; db:Pfam-A.hmm|PF14821.6 evalue:5.3e-26 score:89.9 best_domain_score:86.1 name:Thr_synth_N;
sprot_desc Threonine synthase;
sprot_id sp|P29363|THRC_PSEAE;
sprot_target db:uniprot_sprot|sp|P29363|THRC_PSEAE 1 453 evalue:6.9e-142 qcov:98.10 identity:56.60;
tigrfam_acc TIGR00260;
tigrfam_desc threonine synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name thrC;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00260 evalue:7.5e-82 score:274.3 best_domain_score:274.1 name:TIGR00260;
54340 55602 CDS
ID metaerg.pl|08896
allec_ids 3.4.24.-;
allgo_ids GO:0005886; GO:0046872; GO:0004222;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470857.1 1 420 evalue:3.0e-198 qcov:100.00 identity:85.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00675; PF05193;
pfam_desc Insulinase (Peptidase family M16); Peptidase M16 inactive domain;
pfam_id Peptidase_M16; Peptidase_M16_C;
pfam_target db:Pfam-A.hmm|PF00675.20 evalue:2.1e-44 score:150.3 best_domain_score:149.4 name:Peptidase_M16; db:Pfam-A.hmm|PF05193.21 evalue:4.2e-35 score:120.6 best_domain_score:119.1 name:Peptidase_M16_C;
sprot_desc Uncharacterized zinc protease Rv2782c;
sprot_id sp|P9WHT5|Y2782_MYCTU;
sprot_target db:uniprot_sprot|sp|P9WHT5|Y2782_MYCTU 6 404 evalue:2.1e-73 qcov:95.00 identity:39.20;
55602 56189 CDS
ID metaerg.pl|08897
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470856.1 1 195 evalue:2.9e-95 qcov:100.00 identity:86.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00583; PF13302; PF13420;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_3; Acetyltransf_4;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.1e-09 score:37.7 best_domain_score:37.3 name:Acetyltransf_1; db:Pfam-A.hmm|PF13302.7 evalue:1.9e-22 score:79.7 best_domain_score:79.4 name:Acetyltransf_3; db:Pfam-A.hmm|PF13420.7 evalue:7.4e-09 score:35.1 best_domain_score:34.9 name:Acetyltransf_4;
56256 57686 CDS
ID metaerg.pl|08898
allec_ids 1.1.99.39;
allgo_ids GO:0003824; GO:0050660; GO:0031234; GO:0005739; GO:0051990; GO:0047545; GO:0004458; GO:0071949; GO:0019516; GO:0006807; GO:0009853; GO:0022904;
allko_ids K00102; K03777; K00075; K00004; K18204;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797628.1 1 476 evalue:9.0e-215 qcov:100.00 identity:81.30;
kegg_pathway_id 00650; 00530; 00620;
kegg_pathway_name Butanoate metabolism; Aminosugars metabolism; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF02913; PF01565;
pfam_desc FAD linked oxidases, C-terminal domain; FAD binding domain;
pfam_id FAD-oxidase_C; FAD_binding_4;
pfam_target db:Pfam-A.hmm|PF02913.19 evalue:9.5e-47 score:159.0 best_domain_score:158.5 name:FAD-oxidase_C; db:Pfam-A.hmm|PF01565.23 evalue:3e-32 score:110.5 best_domain_score:109.8 name:FAD_binding_4;
sprot_desc D-2-hydroxyglutarate dehydrogenase, mitochondrial;
sprot_id sp|O23240|D2HDH_ARATH;
sprot_target db:uniprot_sprot|sp|O23240|D2HDH_ARATH 36 468 evalue:3.8e-71 qcov:91.00 identity:37.00;
57986 57657 CDS
ID metaerg.pl|08899
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797629.1 1 109 evalue:1.1e-46 qcov:100.00 identity:88.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF05437;
pfam_desc Branched-chain amino acid transport protein (AzlD);
pfam_id AzlD;
pfam_target db:Pfam-A.hmm|PF05437.12 evalue:3.2e-21 score:74.6 best_domain_score:74.4 name:AzlD;
tm_num 3;
57986 57657 transmembrane_helix
ID metaerg.pl|08900
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o57684-57752i57789-57857o57900-57968i;
58681 57983 CDS
ID metaerg.pl|08901
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482216.1 7 231 evalue:1.4e-91 qcov:97.00 identity:80.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF03591;
pfam_desc AzlC protein;
pfam_id AzlC;
pfam_target db:Pfam-A.hmm|PF03591.14 evalue:7.7e-33 score:113.1 best_domain_score:113.1 name:AzlC;
tm_num 6;
58681 57983 transmembrane_helix
ID metaerg.pl|08902
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i58019-58078o58091-58159i58178-58237o58379-58447i58460-58528o58565-58633i;
59730 58795 CDS
ID metaerg.pl|08903
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657630.1 15 311 evalue:2.0e-74 qcov:95.50 identity:53.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
tm_num 2;
59730 58795 transmembrane_helix
ID metaerg.pl|08904
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o58852-58911i58945-59013o;
60202 59732 CDS
ID metaerg.pl|08905
allgo_ids GO:0003677; GO:0032784; GO:0070063;
allko_ids K03624;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797631.1 1 155 evalue:1.2e-67 qcov:99.40 identity:89.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF01272; PF03449;
pfam_desc Transcription elongation factor, GreA/GreB, C-term; Transcription elongation factor, N-terminal;
pfam_id GreA_GreB; GreA_GreB_N;
pfam_target db:Pfam-A.hmm|PF01272.19 evalue:1.6e-28 score:97.7 best_domain_score:97.1 name:GreA_GreB; db:Pfam-A.hmm|PF03449.15 evalue:1.6e-32 score:110.7 best_domain_score:110.1 name:GreA_GreB_N;
sprot_desc Transcription elongation factor GreA;
sprot_id sp|A1AZ46|GREA_PARDP;
sprot_target db:uniprot_sprot|sp|A1AZ46|GREA_PARDP 1 155 evalue:1.1e-64 qcov:99.40 identity:79.40;
tigrfam_acc TIGR01462;
tigrfam_desc transcription elongation factor GreA;
tigrfam_mainrole Transcription;
tigrfam_name greA;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR01462 evalue:5.2e-60 score:201.1 best_domain_score:200.9 name:TIGR01462;
60450 62096 CDS
ID metaerg.pl|08906
allec_ids 1.5.5.1;
allgo_ids GO:0016491; GO:0055114; GO:0051539; GO:0009055; GO:0004174; GO:0046872; GO:0043783; GO:0048039; GO:0022904;
allko_ids K03388; K00311;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470851.1 1 548 evalue:1.7e-302 qcov:100.00 identity:90.70;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF01266; PF05187; PF00890; PF01494; PF03486; PF13450; PF07992; PF01946;
pfam_desc FAD dependent oxidoreductase; Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; FAD binding domain; FAD binding domain; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Thi4 family;
pfam_id DAO; ETF_QO; FAD_binding_2; FAD_binding_3; HI0933_like; NAD_binding_8; Pyr_redox_2; Thi4;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:2.4e-10 score:39.8 best_domain_score:23.6 name:DAO; db:Pfam-A.hmm|PF05187.13 evalue:1.3e-48 score:162.7 best_domain_score:161.7 name:ETF_QO; db:Pfam-A.hmm|PF00890.24 evalue:9.9e-12 score:43.9 best_domain_score:28.7 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:2.6e-06 score:26.2 best_domain_score:19.3 name:FAD_binding_3; db:Pfam-A.hmm|PF03486.14 evalue:1.5e-06 score:26.4 best_domain_score:25.9 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:5e-09 score:35.5 best_domain_score:33.1 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:7.6e-07 score:27.9 best_domain_score:26.2 name:Pyr_redox_2; db:Pfam-A.hmm|PF01946.17 evalue:2.6e-08 score:32.6 best_domain_score:28.7 name:Thi4;
sprot_desc Electron transfer flavoprotein-ubiquinone oxidoreductase;
sprot_id sp|Q9HZP5|ETFD_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HZP5|ETFD_PSEAE 4 548 evalue:2.6e-172 qcov:99.50 identity:55.00;
62194 63921 CDS
ID metaerg.pl|08907
allgo_ids GO:0005515;
allko_ids K09571; K01768; K09667; K01802; K08884; K03040; K05864;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386485.1 11 575 evalue:2.0e-221 qcov:98.30 identity:70.60;
kegg_pathway_id 03020; 04020; 00230; 01030; 05012;
kegg_pathway_name RNA polymerase; Calcium signaling pathway; Purine metabolism; Glycan structures - biosynthesis 1; Parkinson's disease;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF12895; PF00515; PF13374; PF13414; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF09976; PF13174; PF13176; PF13181; PF13371;
pfam_desc Anaphase-promoting complex, cyclosome, subunit 3; Tetratricopeptide repeat; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat-like domain; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id ANAPC3; TPR_1; TPR_10; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_21; TPR_6; TPR_7; TPR_8; TPR_9;
pfam_target db:Pfam-A.hmm|PF12895.7 evalue:3.8e-09 score:35.9 best_domain_score:9.2 name:ANAPC3; db:Pfam-A.hmm|PF00515.28 evalue:2.3e-19 score:67.5 best_domain_score:16.7 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:1.3e-07 score:30.5 best_domain_score:19.0 name:TPR_10; db:Pfam-A.hmm|PF13414.6 evalue:1.2e-15 score:56.2 best_domain_score:21.5 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:1.3e-15 score:56.7 best_domain_score:26.3 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:6.9e-21 score:72.4 best_domain_score:21.9 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:5.8e-20 score:70.9 best_domain_score:28.5 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:1.7e-10 score:39.8 best_domain_score:10.2 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:7.5e-16 score:57.6 best_domain_score:23.8 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:4.4e-26 score:88.1 best_domain_score:25.6 name:TPR_2; db:Pfam-A.hmm|PF09976.9 evalue:6e-07 score:28.6 best_domain_score:14.6 name:TPR_21; db:Pfam-A.hmm|PF13174.6 evalue:6.2e-08 score:32.0 best_domain_score:11.8 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:1.8e-13 score:48.7 best_domain_score:15.7 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:1.3e-12 score:46.1 best_domain_score:17.4 name:TPR_8; db:Pfam-A.hmm|PF13371.6 evalue:5e-10 score:38.6 best_domain_score:23.5 name:TPR_9;
sp YES;
62194 62274 signal_peptide
ID metaerg.pl|08908
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
63918 64766 CDS
ID metaerg.pl|08909
allec_ids 2.7.1.148;
allgo_ids GO:0050515; GO:0005524; GO:0019288; GO:0016114;
allko_ids K00919;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797634.1 1 277 evalue:1.4e-109 qcov:98.20 identity:72.90;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id NONMEVIPP-PWY; PWY-6270; PWY-5121;
metacyc_pathway_name methylerythritol phosphate pathway I;; isoprene biosynthesis I;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);;
metacyc_pathway_type MEP-Pathways;; ISOPRENOIDS; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;;
pfam_acc PF08544;
pfam_desc GHMP kinases C terminal;
pfam_id GHMP_kinases_C;
pfam_target db:Pfam-A.hmm|PF08544.13 evalue:5.1e-11 score:42.0 best_domain_score:39.8 name:GHMP_kinases_C;
sprot_desc 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;
sprot_id sp|Q3J5K7|ISPE_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J5K7|ISPE_RHOS4 7 270 evalue:3.5e-80 qcov:93.60 identity:61.50;
tigrfam_acc TIGR00154;
tigrfam_desc 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ispE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00154 evalue:1.7e-43 score:148.4 best_domain_score:148.0 name:TIGR00154;
65770 64760 CDS
ID metaerg.pl|08910
allec_ids 2.5.1.90;
allgo_ids GO:0008299; GO:0005829; GO:0042802; GO:0046872; GO:0004659; GO:0016094; GO:0006744;
allko_ids K02523;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470849.1 10 336 evalue:3.7e-146 qcov:97.30 identity:82.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:7e-71 score:237.5 best_domain_score:237.3 name:polyprenyl_synt;
sprot_desc Octaprenyl diphosphate synthase;
sprot_id sp|P0AD57|ISPB_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AD57|ISPB_ECOLI 15 334 evalue:1.8e-67 qcov:95.20 identity:45.30;
65819 66034 CDS
ID metaerg.pl|08911
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797635.1 1 71 evalue:1.0e-29 qcov:100.00 identity:93.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF09413;
pfam_desc Putative prokaryotic signal transducing protein;
pfam_id DUF2007;
pfam_target db:Pfam-A.hmm|PF09413.10 evalue:2.6e-12 score:45.9 best_domain_score:45.7 name:DUF2007;
66027 66788 CDS
ID metaerg.pl|08912
allgo_ids GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797636.1 1 252 evalue:2.8e-106 qcov:99.60 identity:78.60;
kegg_pathway_id 00380; 00150; 00340; 00350; 00450; 00626;
kegg_pathway_name Tryptophan metabolism; Androgen and estrogen metabolism; Histidine metabolism; Tyrosine metabolism; Selenoamino acid metabolism; Naphthalene and anthracene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF08241; PF13649; PF13847; PF05175;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain;
pfam_id Methyltransf_11; Methyltransf_25; Methyltransf_31; MTS;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:1.1e-07 score:31.7 best_domain_score:30.0 name:Methyltransf_11; db:Pfam-A.hmm|PF13649.6 evalue:9.1e-11 score:41.6 best_domain_score:40.6 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:6.7e-08 score:31.7 best_domain_score:31.4 name:Methyltransf_31; db:Pfam-A.hmm|PF05175.14 evalue:3.8e-13 score:48.6 best_domain_score:47.3 name:MTS;
66829 67473 CDS
ID metaerg.pl|08913
allec_ids 4.2.99.18;
allgo_ids GO:0051539; GO:0140078; GO:0003677; GO:0019104; GO:0046872; GO:0006284;
allko_ids K10773; K03653; K01249; K03575; K01741;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245169.1 1 213 evalue:1.3e-112 qcov:99.50 identity:93.40;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF10576; PF00633; PF00730;
pfam_desc Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; HhH-GPD superfamily base excision DNA repair protein;
pfam_id EndIII_4Fe-2S; HHH; HhH-GPD;
pfam_target db:Pfam-A.hmm|PF10576.9 evalue:1.9e-05 score:24.1 best_domain_score:24.1 name:EndIII_4Fe-2S; db:Pfam-A.hmm|PF00633.23 evalue:2.4e-08 score:32.7 best_domain_score:31.6 name:HHH; db:Pfam-A.hmm|PF00730.25 evalue:1.5e-15 score:56.8 best_domain_score:56.0 name:HhH-GPD;
sprot_desc Endonuclease III;
sprot_id sp|P0AB84|END3_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AB84|END3_ECOL6 12 212 evalue:1.7e-63 qcov:93.90 identity:58.70;
tigrfam_acc TIGR01083;
tigrfam_desc endonuclease III;
tigrfam_mainrole DNA metabolism;
tigrfam_name nth;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01083 evalue:8.1e-77 score:256.4 best_domain_score:256.2 name:TIGR01083;
67470 68459 CDS
ID metaerg.pl|08914
allec_ids 2.7.1.-;
allgo_ids GO:0016301; GO:0016773;
allko_ids K00847;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245168.1 1 329 evalue:3.0e-153 qcov:100.00 identity:83.90;
kegg_pathway_id 00051; 00500;
kegg_pathway_name Fructose and mannose metabolism; Starch and sucrose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id P1-PWY; PWY-5381; PWY0-163; LPSSYN-PWY; PWY0-845; PWY-5107; PLPSAL-PWY; PWY0-1261; PWY-6577; LIPA-CORESYN-PWY;
metacyc_pathway_name ; pyridine nucleotide cycling (plants);; ; superpathway of lipopolysaccharide biosynthesis;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;; phytol salvage pathway;; pyridoxal 5'-phosphate salvage I;; anhydromuropeptides recycling I;; farnesylcysteine salvage pathway;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type ; NAD-Metabolism;; ; Lipid-Biosynthesis; Super-Pathways;; Super-Pathways; Vitamin-B6-Biosynthesis;; DITERPENOID-SYN;; Vitamin-B6-Biosynthesis;; Anhydromuropeptides-Recycling;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF00294;
pfam_desc pfkB family carbohydrate kinase;
pfam_id PfkB;
pfam_target db:Pfam-A.hmm|PF00294.24 evalue:2.4e-42 score:144.5 best_domain_score:144.1 name:PfkB;
sprot_desc Uncharacterized sugar kinase slr0537;
sprot_id sp|Q55480|YZ37_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55480|YZ37_SYNY3 4 320 evalue:4.6e-39 qcov:96.40 identity:31.70;
68528 69091 CDS
ID metaerg.pl|08915
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481269.1 1 185 evalue:6.9e-70 qcov:98.90 identity:72.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
sp YES;
68528 68587 signal_peptide
ID metaerg.pl|08916
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
69168 70052 CDS
ID metaerg.pl|08917
allec_ids 3.4.24.-;
allgo_ids GO:0004222; GO:0006508; GO:0016021; GO:0005886; GO:0008270;
allko_ids K03799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470843.1 1 294 evalue:2.6e-140 qcov:100.00 identity:87.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:2.1e-41 score:141.1 best_domain_score:141.1 name:Peptidase_M48;
sprot_desc Protease HtpX homolog;
sprot_id sp|A4WRW9|HTPX_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WRW9|HTPX_RHOS5 1 293 evalue:4.9e-101 qcov:99.70 identity:66.10;
tm_num 3;
69168 70052 transmembrane_helix
ID metaerg.pl|08918
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology o69210-69278i69588-69656o69684-69752i;
70832 70095 CDS
ID metaerg.pl|08919
allgo_ids GO:0016787;
allko_ids K07313; K01090;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797639.1 1 244 evalue:6.7e-113 qcov:99.60 identity:77.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:2.6e-15 score:56.7 best_domain_score:56.0 name:Metallophos;
72500 70905 CDS
ID metaerg.pl|08920
allec_ids 1.1.1.95;
allgo_ids GO:0016616; GO:0051287; GO:0055114; GO:0004617; GO:0006520; GO:0006564;
allko_ids K03778; K04496; K01752; K00018; K00058;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797640.1 1 531 evalue:3.6e-273 qcov:100.00 identity:91.10;
kegg_pathway_id 00630; 00272; 00260; 04310; 00620;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Cysteine metabolism; Glycine, serine and threonine metabolism; Wnt signaling pathway; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id SULFATE-CYS-PWY; SER-GLYSYN-PWY; SERSYN-PWY;
metacyc_pathway_name superpathway of sulfate assimilation and cysteine biosynthesis;; superpathway of L-serine and glycine biosynthesis I;; L-serine biosynthesis I;;
metacyc_pathway_type Sulfur-Metabolism; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; SERINE-BIOSYNTHESIS;;
pfam_acc PF00389; PF02826;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain;
pfam_id 2-Hacid_dh; 2-Hacid_dh_C;
pfam_target db:Pfam-A.hmm|PF00389.30 evalue:2.1e-37 score:127.0 best_domain_score:125.3 name:2-Hacid_dh; db:Pfam-A.hmm|PF02826.19 evalue:6e-64 score:213.9 best_domain_score:212.8 name:2-Hacid_dh_C;
sprot_desc D-3-phosphoglycerate dehydrogenase;
sprot_id sp|P73821|SERA_SYNY3;
sprot_target db:uniprot_sprot|sp|P73821|SERA_SYNY3 4 514 evalue:1.5e-116 qcov:96.20 identity:43.60;
tigrfam_acc TIGR01327;
tigrfam_desc phosphoglycerate dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name PGDH;
tigrfam_sub1role Serine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01327 evalue:3.8e-202 score:671.9 best_domain_score:671.7 name:TIGR01327;
73715 72570 CDS
ID metaerg.pl|08921
allec_ids 2.6.1.52;
allgo_ids GO:0005737; GO:0004648; GO:0030170; GO:0006564; GO:0008615;
allko_ids K00831;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481266.1 1 381 evalue:1.4e-202 qcov:100.00 identity:91.60;
kegg_pathway_id 00260; 00750;
kegg_pathway_name Glycine, serine and threonine metabolism; Vitamin B6 metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id PYRIDOXSYN-PWY; SULFATE-CYS-PWY; SER-GLYSYN-PWY; PWY0-845; SERSYN-PWY;
metacyc_pathway_name pyridoxal 5'-phosphate biosynthesis I;; superpathway of sulfate assimilation and cysteine biosynthesis;; superpathway of L-serine and glycine biosynthesis I;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;; L-serine biosynthesis I;;
metacyc_pathway_type Vitamin-B6-Biosynthesis;; Sulfur-Metabolism; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways; Vitamin-B6-Biosynthesis;; SERINE-BIOSYNTHESIS;;
sprot_desc Phosphoserine aminotransferase;
sprot_id sp|P52878|SERC_METBF;
sprot_target db:uniprot_sprot|sp|P52878|SERC_METBF 6 375 evalue:4.0e-127 qcov:97.10 identity:60.40;
tigrfam_acc TIGR01365;
tigrfam_desc phosphoserine aminotransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name serC_2;
tigrfam_sub1role Serine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01365 evalue:7.3e-188 score:623.4 best_domain_score:623.2 name:TIGR01365;
73878 74759 CDS
ID metaerg.pl|08922
allec_ids 3.1.3.3;
allgo_ids GO:0005737; GO:0000287; GO:0016791; GO:0004647; GO:0016311; GO:0006564;
allko_ids K01079; K07166; K02203;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797642.1 1 290 evalue:2.4e-133 qcov:99.00 identity:83.80;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metacyc_pathway_id SERSYN-PWY; SER-GLYSYN-PWY; SULFATE-CYS-PWY;
metacyc_pathway_name L-serine biosynthesis I;; superpathway of L-serine and glycine biosynthesis I;; superpathway of sulfate assimilation and cysteine biosynthesis;;
metacyc_pathway_type SERINE-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Sulfur-Metabolism; Super-Pathways;;
pfam_acc PF12710; PF00702; PF08282;
pfam_desc haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase;
pfam_id HAD; Hydrolase; Hydrolase_3;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:3.4e-19 score:69.2 best_domain_score:68.7 name:HAD; db:Pfam-A.hmm|PF00702.26 evalue:6.2e-11 score:42.2 best_domain_score:41.6 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:8.3e-11 score:41.3 best_domain_score:39.1 name:Hydrolase_3;
sprot_desc Phosphoserine phosphatase;
sprot_id sp|Q9S281|SERB_STRCO;
sprot_target db:uniprot_sprot|sp|Q9S281|SERB_STRCO 37 292 evalue:1.3e-40 qcov:87.40 identity:42.30;
tigrfam_acc TIGR00338; TIGR01488;
tigrfam_desc phosphoserine phosphatase SerB; HAD phosphoserine phosphatase-like hydrolase, family IB;
tigrfam_mainrole Amino acid biosynthesis; Unknown function;
tigrfam_name serB; HAD-SF-IB;
tigrfam_sub1role Serine family; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00338 evalue:1.7e-61 score:206.8 best_domain_score:206.4 name:TIGR00338; db:TIGRFAMs.hmm|TIGR01488 evalue:2.7e-31 score:108.0 best_domain_score:107.6 name:TIGR01488;
74846 76009 CDS
ID metaerg.pl|08923
allec_ids 3.5.1.32;
allgo_ids GO:0016787; GO:0047980;
allko_ids K01451;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470838.1 1 386 evalue:3.6e-198 qcov:99.70 identity:86.80;
kegg_pathway_id 00360;
kegg_pathway_name Phenylalanine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:3.8e-08 score:32.4 best_domain_score:30.8 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:9.8e-37 score:125.9 best_domain_score:125.4 name:Peptidase_M20;
sprot_desc Hippurate hydrolase;
sprot_id sp|P45493|HIPO_CAMJE;
sprot_target db:uniprot_sprot|sp|P45493|HIPO_CAMJE 18 385 evalue:3.3e-65 qcov:95.10 identity:40.30;
tigrfam_acc TIGR01891;
tigrfam_desc amidohydrolase;
tigrfam_mainrole Protein fate;
tigrfam_name amidohydrolases;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01891 evalue:3.6e-96 score:321.6 best_domain_score:321.5 name:TIGR01891;
77997 76057 CDS
ID metaerg.pl|08924
allko_ids K03390; K00443; K00532; K03047; K00240; K00395; K00123; K00371; K03941; K00245; K00337; K00873; K00204; K04014; K00186; K11260; K00122; K00380; K00125; K00192; K00335; K00226; K00205; K00336; K00441; K00171; K08346; K11181; K00172; K05580; K00533; K00436; K00124; K15906; K00338; K00265; K00390; K08349; K08264; K00207; K03388; K00176; K00170; K05588;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657444.1 16 644 evalue:0.0e+00 qcov:97.40 identity:84.10;
kegg_pathway_id 05012; 00630; 03020; 00640; 00650; 00790; 00620; 00450; 00240; 00632; 00720; 00983; 00190; 00410; 00130; 00680; 00633; 00251; 00910; 02020; 00020; 00770; 00230; 00920; 00280; 00710; 00010;
kegg_pathway_name Parkinson's disease; Glyoxylate and dicarboxylate metabolism; RNA polymerase; Propanoate metabolism; Butanoate metabolism; Folate biosynthesis; Pyruvate metabolism; Selenoamino acid metabolism; Pyrimidine metabolism; Benzoate degradation via CoA ligation; Reductive carboxylate cycle (CO2 fixation); Drug metabolism - other enzymes; Oxidative phosphorylation; beta-Alanine metabolism; Ubiquinone biosynthesis; Methane metabolism; Trinitrotoluene degradation; Glutamate metabolism; Nitrogen metabolism; Two-component system - General; Citrate cycle (TCA cycle); Pantothenate and CoA biosynthesis; Purine metabolism; Sulfur metabolism; Valine, leucine and isoleucine degradation; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00037; PF13237; PF13484; PF12837; PF12838; PF13187;
pfam_desc 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S double cluster binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id Fer4; Fer4_10; Fer4_16; Fer4_6; Fer4_7; Fer4_9;
pfam_target db:Pfam-A.hmm|PF00037.27 evalue:3.2e-17 score:60.8 best_domain_score:24.0 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:3.7e-09 score:35.8 best_domain_score:25.1 name:Fer4_10; db:Pfam-A.hmm|PF13484.6 evalue:2.6e-11 score:43.5 best_domain_score:15.9 name:Fer4_16; db:Pfam-A.hmm|PF12837.7 evalue:4.8e-15 score:54.2 best_domain_score:25.4 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:1.1e-16 score:60.3 best_domain_score:29.8 name:Fer4_7; db:Pfam-A.hmm|PF13187.6 evalue:3.5e-13 score:48.7 best_domain_score:31.8 name:Fer4_9;
78100 78828 CDS
ID metaerg.pl|08925
allgo_ids GO:0006464;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795541.1 1 242 evalue:2.0e-114 qcov:100.00 identity:83.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF16917;
pfam_desc Biotin/lipoate A/B protein ligase family;
pfam_id BPL_LplA_LipB_2;
pfam_target db:Pfam-A.hmm|PF16917.5 evalue:2.6e-51 score:173.0 best_domain_score:172.7 name:BPL_LplA_LipB_2;
78825 79373 CDS
ID metaerg.pl|08926
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795540.1 1 182 evalue:3.1e-83 qcov:100.00 identity:86.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
79373 80362 CDS
ID metaerg.pl|08927
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468648.1 1 329 evalue:8.5e-156 qcov:100.00 identity:79.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
80375 80905 CDS
ID metaerg.pl|08928
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468647.1 1 176 evalue:4.2e-77 qcov:100.00 identity:78.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF11749;
pfam_desc Protein of unknown function (DUF3305);
pfam_id DUF3305;
pfam_target db:Pfam-A.hmm|PF11749.8 evalue:7e-32 score:109.7 best_domain_score:109.3 name:DUF3305;
80909 81559 CDS
ID metaerg.pl|08929
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481778.1 1 215 evalue:2.2e-51 qcov:99.50 identity:56.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF11748;
pfam_desc Protein of unknown function (DUF3306);
pfam_id DUF3306;
pfam_target db:Pfam-A.hmm|PF11748.8 evalue:5.7e-21 score:74.9 best_domain_score:74.9 name:DUF3306;
81683 82288 CDS
ID metaerg.pl|08930
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_040482882.1 1 201 evalue:4.5e-75 qcov:100.00 identity:69.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF02613;
pfam_desc Nitrate reductase delta subunit;
pfam_id Nitrate_red_del;
pfam_target db:Pfam-A.hmm|PF02613.15 evalue:7.9e-29 score:99.7 best_domain_score:99.2 name:Nitrate_red_del;
82360 82575 CDS
ID metaerg.pl|08931
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795535.1 1 71 evalue:1.1e-23 qcov:100.00 identity:81.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
sp YES;
tm_num 1;
82360 82473 signal_peptide
ID metaerg.pl|08932
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
82360 82575 transmembrane_helix
ID metaerg.pl|08933
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i82396-82455o;
82575 85535 CDS
ID metaerg.pl|08934
allgo_ids GO:0016491; GO:0055114;
allko_ids K00817; K08348; K03388; K00203; K00436; K02030; K04564; K00369; K02048; K02027; K00376; K00360; K00372; K13483; K02567; K00336; K04014; K03934; K00380; K05813; K00122; K00367; K00202; K02035; K08345; K00123; K00370; K15905; K05299; K00201;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795534.1 1 986 evalue:0.0e+00 qcov:100.00 identity:93.20;
kegg_pathway_id 00910; 02020; 02010; 00680; 00790; 00360; 00340; 00190; 05012; 00350; 00630; 00130; 00920; 00401; 00400;
kegg_pathway_name Nitrogen metabolism; Two-component system - General; ABC transporters - General; Methane metabolism; Folate biosynthesis; Phenylalanine metabolism; Histidine metabolism; Oxidative phosphorylation; Parkinson's disease; Tyrosine metabolism; Glyoxylate and dicarboxylate metabolism; Ubiquinone biosynthesis; Sulfur metabolism; Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00384; PF04879; PF01568;
pfam_desc Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain; Molydopterin dinucleotide binding domain;
pfam_id Molybdopterin; Molybdop_Fe4S4; Molydop_binding;
pfam_target db:Pfam-A.hmm|PF00384.22 evalue:3.3e-55 score:187.0 best_domain_score:186.3 name:Molybdopterin; db:Pfam-A.hmm|PF04879.16 evalue:8.5e-13 score:47.3 best_domain_score:46.1 name:Molybdop_Fe4S4; db:Pfam-A.hmm|PF01568.21 evalue:9.4e-24 score:82.8 best_domain_score:80.2 name:Molydop_binding;
sp YES;
tm_num 1;
82575 82754 signal_peptide
ID metaerg.pl|08935
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
82575 85535 transmembrane_helix
ID metaerg.pl|08936
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i82671-82739o;
85551 86147 CDS
ID metaerg.pl|08937
allgo_ids GO:0051539; GO:0009055; GO:0046872;
allko_ids K08346; K00226; K00335; K00125; K00171; K00441; K00205; K00390; K08349; K03388; K00170; K00176; K00533; K00124; K00172; K15906; K00240; K00371; K04014; K00122; K11260; K00204;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus tibetensis;
genomedb_acc GCF_900102505.1;
genomedb_target db:genomedb|GCF_900102505.1|WP_090744819.1 1 198 evalue:4.0e-116 qcov:100.00 identity:97.50;
kegg_pathway_id 00910; 02020; 00633; 00680; 00190; 00130; 00920; 00010; 00020; 00620; 00650; 00640; 00790; 00630; 00720; 00240; 00632;
kegg_pathway_name Nitrogen metabolism; Two-component system - General; Trinitrotoluene degradation; Methane metabolism; Oxidative phosphorylation; Ubiquinone biosynthesis; Sulfur metabolism; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Pyruvate metabolism; Butanoate metabolism; Propanoate metabolism; Folate biosynthesis; Glyoxylate and dicarboxylate metabolism; Reductive carboxylate cycle (CO2 fixation); Pyrimidine metabolism; Benzoate degradation via CoA ligation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF00037; PF13237; PF13247; PF12797; PF12837; PF12838; PF13187;
pfam_desc 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id Fer4; Fer4_10; Fer4_11; Fer4_2; Fer4_6; Fer4_7; Fer4_9;
pfam_target db:Pfam-A.hmm|PF00037.27 evalue:2.7e-09 score:35.7 best_domain_score:31.3 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:9.8e-11 score:40.8 best_domain_score:30.4 name:Fer4_10; db:Pfam-A.hmm|PF13247.6 evalue:1.7e-09 score:37.0 best_domain_score:30.3 name:Fer4_11; db:Pfam-A.hmm|PF12797.7 evalue:9.5e-09 score:34.1 best_domain_score:24.2 name:Fer4_2; db:Pfam-A.hmm|PF12837.7 evalue:1.3e-06 score:27.5 best_domain_score:26.2 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:6.7e-14 score:51.5 best_domain_score:32.4 name:Fer4_7; db:Pfam-A.hmm|PF13187.6 evalue:3.4e-10 score:39.2 best_domain_score:25.3 name:Fer4_9;
sprot_desc Formate dehydrogenase iron-sulfur subunit;
sprot_id sp|P27273|FDHB_WOLSU;
sprot_target db:uniprot_sprot|sp|P27273|FDHB_WOLSU 2 192 evalue:3.8e-73 qcov:96.50 identity:63.90;
86160 87155 CDS
ID metaerg.pl|08938
allec_ids 1.2.1.2;
allgo_ids GO:0009055; GO:0016021;
allko_ids K00124; K00127; K08350;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795532.1 1 331 evalue:2.0e-149 qcov:100.00 identity:82.50;
kegg_pathway_id 02020; 00680; 00630;
kegg_pathway_name Two-component system - General; Methane metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
metabolic_acc TIGR01583;
metabolic_process compound:C1 compounds;process:Formate oxidation;gene:formate dehydrogenase, gamma subunit;;
metabolic_target db:metabolic.hmm|TIGR01583 evalue:7.4e-45 score:152.6 best_domain_score:152.0 name:TIGR01583;
metacyc_pathway_id PWY-1881; P164-PWY; PWY-1882; PWY-5497;
metacyc_pathway_name formate oxidation to CO2;; purine nucleobases degradation I (anaerobic);; superpathway of C1 compounds oxidation to CO2;; purine nucleobases degradation II (anaerobic);;
metacyc_pathway_type C1-COMPOUNDS; CHEMOAUTOTROPHIC-ENERGY-METABOLISM;; Fermentation; Purine-Degradation;; C1-COMPOUNDS; Super-Pathways;; Fermentation; Purine-Degradation;;
pfam_acc PF01292;
pfam_desc Prokaryotic cytochrome b561;
pfam_id Ni_hydr_CYTB;
pfam_target db:Pfam-A.hmm|PF01292.20 evalue:4.2e-17 score:61.6 best_domain_score:61.5 name:Ni_hydr_CYTB;
sp YES;
tigrfam_acc TIGR01583;
tigrfam_desc formate dehydrogenase, gamma subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name formate-DH-gamm;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01583 evalue:7.4e-45 score:152.6 best_domain_score:152.0 name:TIGR01583;
tm_num 6;
86160 86237 signal_peptide
ID metaerg.pl|08939
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
86160 87155 transmembrane_helix
ID metaerg.pl|08940
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
topology i86178-86237o86391-86459i86529-86597o86661-86729i86835-86903o86946-87014i;
87255 87569 CDS
ID metaerg.pl|08941
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468641.1 4 105 evalue:1.5e-21 qcov:97.10 identity:56.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.420425; 216.157; 0.00945997; 0.47309; 217.06;
pfam_acc PF01883;
pfam_desc Iron-sulfur cluster assembly protein;
pfam_id FeS_assembly_P;
pfam_target db:Pfam-A.hmm|PF01883.19 evalue:1.9e-10 score:40.0 best_domain_score:39.6 name:FeS_assembly_P;
>Feature NODE_62_length_87424_cov_12.7548
979 5 CDS
ID metaerg.pl|08942
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0003677; GO:0019344;
allko_ids K02041;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_009287995.1 1 324 evalue:6.4e-180 qcov:100.00 identity:98.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:1.8e-16 score:59.1 best_domain_score:58.0 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:1.1e-44 score:151.5 best_domain_score:151.0 name:LysR_substrate;
sprot_desc HTH-type transcriptional regulator CysB;
sprot_id sp|P45600|CYSB_KLEPN;
sprot_target db:uniprot_sprot|sp|P45600|CYSB_KLEPN 1 323 evalue:1.6e-116 qcov:99.70 identity:64.50;
1371 1694 CDS
ID metaerg.pl|08943
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0009507; GO:0015035; GO:0045454; GO:0006662;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002332255;
genomedb_acc GCF_002332255.1;
genomedb_target db:genomedb|GCF_002332255.1|WP_096279135.1 1 107 evalue:3.7e-52 qcov:100.00 identity:100.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00578; PF00085; PF13098; PF13905; PF13728;
pfam_desc AhpC/TSA family; Thioredoxin; Thioredoxin-like domain; Thioredoxin-like; F plasmid transfer operon protein;
pfam_id AhpC-TSA; Thioredoxin; Thioredoxin_2; Thioredoxin_8; TraF;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:5.5e-06 score:25.5 best_domain_score:25.4 name:AhpC-TSA; db:Pfam-A.hmm|PF00085.20 evalue:3.4e-32 score:109.7 best_domain_score:109.6 name:Thioredoxin; db:Pfam-A.hmm|PF13098.6 evalue:3e-09 score:36.5 best_domain_score:35.7 name:Thioredoxin_2; db:Pfam-A.hmm|PF13905.6 evalue:1.5e-06 score:27.6 best_domain_score:24.2 name:Thioredoxin_8; db:Pfam-A.hmm|PF13728.6 evalue:6.4e-07 score:28.6 best_domain_score:28.4 name:TraF;
sprot_desc Thioredoxin;
sprot_id sp|P50254|THIO_PYRYE;
sprot_target db:uniprot_sprot|sp|P50254|THIO_PYRYE 7 105 evalue:2.2e-27 qcov:92.50 identity:53.50;
tigrfam_acc TIGR01068;
tigrfam_desc thioredoxin;
tigrfam_mainrole Energy metabolism;
tigrfam_name thioredoxin;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01068 evalue:6.2e-35 score:118.6 best_domain_score:118.4 name:TIGR01068;
2866 1769 CDS
ID metaerg.pl|08944
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002966495;
genomedb_acc GCF_002966495.1;
genomedb_target db:genomedb|GCF_002966495.1|WP_009098658.1 1 365 evalue:2.1e-163 qcov:100.00 identity:82.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:3.7e-54 score:183.3 best_domain_score:182.9 name:AI-2E_transport;
sprot_desc Putative transport protein YhhT;
sprot_id sp|P0AGM1|YHHT_ECO57;
sprot_target db:uniprot_sprot|sp|P0AGM1|YHHT_ECO57 18 347 evalue:4.0e-52 qcov:90.40 identity:38.40;
tm_num 8;
2866 1769 transmembrane_helix
ID metaerg.pl|08945
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i1802-1870o1880-1948i1982-2050o2213-2281i2384-2452o2465-2533i2552-2620o2663-2731i;
3128 3982 CDS
ID metaerg.pl|08946
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693707.1 1 284 evalue:3.7e-115 qcov:100.00 identity:80.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF04402;
pfam_desc Protein of unknown function (DUF541);
pfam_id SIMPL;
pfam_target db:Pfam-A.hmm|PF04402.14 evalue:1.4e-35 score:122.8 best_domain_score:122.5 name:SIMPL;
sp YES;
3128 3238 signal_peptide
ID metaerg.pl|08947
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
5297 3927 CDS
ID metaerg.pl|08948
allec_ids 6.1.1.11;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004828; GO:0016260; GO:0097056; GO:0006434;
allko_ids K01875;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF56804.1 32 456 evalue:6.5e-239 qcov:93.20 identity:97.60;
kegg_pathway_id 00260; 00970;
kegg_pathway_name Glycine, serine and threonine metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id TRNA-CHARGING-PWY; PWY-6281; PWY0-901;
metacyc_pathway_name tRNA charging;; L-selenocysteine biosynthesis II (archaea and eukaryotes);; L-selenocysteine biosynthesis I (bacteria);;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;; Selenocysteine-Biosynthesis;; Selenocysteine-Biosynthesis;;
pfam_acc PF02403; PF00587;
pfam_desc Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T);
pfam_id Seryl_tRNA_N; tRNA-synt_2b;
pfam_target db:Pfam-A.hmm|PF02403.22 evalue:4.6e-30 score:103.3 best_domain_score:102.5 name:Seryl_tRNA_N; db:Pfam-A.hmm|PF00587.25 evalue:7.6e-35 score:119.7 best_domain_score:119.2 name:tRNA-synt_2b;
sprot_desc Serine--tRNA ligase;
sprot_id sp|Q1QV43|SYS_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QV43|SYS_CHRSD 32 454 evalue:7.4e-197 qcov:92.80 identity:79.00;
tigrfam_acc TIGR00414;
tigrfam_desc serine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name serS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00414 evalue:2.8e-169 score:562.7 best_domain_score:562.5 name:TIGR00414;
5478 6728 CDS
ID metaerg.pl|08949
allgo_ids GO:0015293; GO:0016021; GO:0005886; GO:0005283; GO:0015108; GO:0042802; GO:0015183; GO:0046872; GO:0015810; GO:1902476; GO:0140009; GO:0070778; GO:0015813; GO:0070207;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000219565;
genomedb_acc GCF_000219565.1;
genomedb_target db:genomedb|GCF_000219565.1|WP_039868714.1 1 416 evalue:9.6e-205 qcov:100.00 identity:93.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00375;
pfam_desc Sodium:dicarboxylate symporter family;
pfam_id SDF;
pfam_target db:Pfam-A.hmm|PF00375.18 evalue:3.4e-134 score:447.0 best_domain_score:446.8 name:SDF;
sprot_desc Glutamate transporter homolog;
sprot_id sp|O59010|GLT_PYRHO;
sprot_target db:uniprot_sprot|sp|O59010|GLT_PYRHO 44 408 evalue:3.2e-82 qcov:87.70 identity:46.30;
tm_num 8;
5478 6728 transmembrane_helix
ID metaerg.pl|08950
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i5511-5579o5622-5690i5736-5804o5928-5981i6042-6101o6144-6212i6414-6482o6540-6608i;
6877 7467 CDS
ID metaerg.pl|08951
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002366715;
genomedb_acc GCA_002366715.1;
genomedb_target db:genomedb|GCA_002366715.1|DFBS01000014.1_56 1 196 evalue:5.2e-92 qcov:100.00 identity:88.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF13875;
pfam_desc Domain of unknown function (DUF4202);
pfam_id DUF4202;
pfam_target db:Pfam-A.hmm|PF13875.6 evalue:1.2e-68 score:229.9 best_domain_score:229.7 name:DUF4202;
7556 10654 CDS
ID metaerg.pl|08952
allgo_ids GO:0016491; GO:0050660; GO:0055114; GO:0051539; GO:0071949; GO:0046872;
allko_ids K00102; K00004; K00075;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035583941.1 1 1030 evalue:0.0e+00 qcov:99.80 identity:91.20;
kegg_pathway_id 00620; 00530; 00650;
kegg_pathway_name Pyruvate metabolism; Aminosugars metabolism; Butanoate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF08031; PF18683; PF02913; PF01565; PF13183;
pfam_desc Berberine and berberine like ; Chitinase W immunoglobulin-like domain; FAD linked oxidases, C-terminal domain; FAD binding domain ; 4Fe-4S dicluster domain;
pfam_id BBE; ChiW_Ig_like; FAD-oxidase_C; FAD_binding_4; Fer4_8;
pfam_target db:Pfam-A.hmm|PF08031.12 evalue:4.2e-05 score:22.8 best_domain_score:21.7 name:BBE; db:Pfam-A.hmm|PF18683.1 evalue:0.0048 score:16.3 best_domain_score:15.1 name:ChiW_Ig_like; db:Pfam-A.hmm|PF02913.19 evalue:5.2e-55 score:186.0 best_domain_score:185.5 name:FAD-oxidase_C; db:Pfam-A.hmm|PF01565.23 evalue:3.8e-37 score:126.3 best_domain_score:125.5 name:FAD_binding_4; db:Pfam-A.hmm|PF13183.6 evalue:9.2e-13 score:47.7 best_domain_score:46.5 name:Fer4_8;
sprot_desc hypothetical protein;
sprot_id sp|P77748|YDIJ_ECOLI;
sprot_target db:uniprot_sprot|sp|P77748|YDIJ_ECOLI 20 1030 evalue:1.8e-270 qcov:98.00 identity:47.80;
11328 10765 CDS
ID metaerg.pl|08953
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002966495;
genomedb_acc GCF_002966495.1;
genomedb_target db:genomedb|GCF_002966495.1|WP_009098663.1 1 187 evalue:1.5e-80 qcov:100.00 identity:80.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
sp YES;
10765 10833 signal_peptide
ID metaerg.pl|08954
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
12213 11509 CDS
ID metaerg.pl|08955
allgo_ids GO:0000160; GO:0003677; GO:0006355;
allko_ids K03407; K07637; K07654; K07682; K07652; K07646; K07641; K07673; K01120; K07639; K11354; K07778; K07768; K02478; K07679; K07648; K07642; K11711; K11356; K11640; K00760; K02484; K07704; K08282; K07677; K07708; K11231; K08479; K02668; K03388; K07640; K07710; K01768; K02489; K07716; K07653; K07638; K07636; K02482; K02480; K07678; K10715; K11527; K07676; K10681; K06379; K07644; K04757; K11357; K10125; K13761; K02486; K11383; K12767; K07675; K07647; K07657;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078088147.1 1 232 evalue:5.4e-112 qcov:99.10 identity:88.80;
kegg_pathway_id 00983; 03090; 02020; 04011; 00230; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Purine metabolism; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:3.6e-21 score:74.7 best_domain_score:74.2 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:5e-25 score:86.6 best_domain_score:85.9 name:Trans_reg_C;
sprot_desc Probable transcriptional regulatory protein SYNPCC7002_A0851;
sprot_id sp|P32040|Y851_SYNP2;
sprot_target db:uniprot_sprot|sp|P32040|Y851_SYNP2 3 229 evalue:8.0e-46 qcov:97.00 identity:44.30;
13830 12238 CDS
ID metaerg.pl|08956
allgo_ids GO:0007165; GO:0016021;
allko_ids K07677; K07708; K07645; K08282; K10909; K07704; K11231; K07643; K02491; K11711; K07642; K02484; K11640; K11356; K07768; K11633; K07778; K11354; K13533; K11328; K07711; K08884; K07648; K07679; K02478; K07718; K07698; K07651; K07649; K00936; K07654; K07637; K03407; K07639; K08475; K07673; K13598; K07641; K07646; K07652; K14509; K11520; K07769; K12767; K11383; K02486; K11629; K10125; K11357; K04757; K13040; K10942; K07647; K07675; K07717; K01769; K06379; K10681; K07676; K07650; K07709; K07644; K02480; K02482; K07636; K07638; K07653; K02030; K11527; K07655; K10715; K07678; K03388; K02668; K08479; K07674; K07716; K02489; K07656; K01768; K07710; K07640;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078088148.1 1 525 evalue:3.0e-219 qcov:99.10 identity:78.30;
kegg_pathway_id 00790; 05111; 00230; 02020; 04011; 03090;
kegg_pathway_name Folate biosynthesis; Vibrio cholerae pathogenic cycle; Purine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00672; PF02518; PF00512;
pfam_desc HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HAMP; HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF00672.25 evalue:5e-11 score:42.0 best_domain_score:42.0 name:HAMP; db:Pfam-A.hmm|PF02518.26 evalue:5e-16 score:58.5 best_domain_score:57.5 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:2.2e-13 score:49.3 best_domain_score:49.3 name:HisKA;
sp YES;
tm_num 2;
12238 12318 signal_peptide
ID metaerg.pl|08957
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
13830 12238 transmembrane_helix
ID metaerg.pl|08958
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology o12253-12321i12781-12849o;
14735 13932 CDS
ID metaerg.pl|08959
allec_ids 4.1.1.48;
allgo_ids GO:0004425; GO:0000162;
allko_ids K01609; K01817; K13498;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035583946.1 1 267 evalue:5.5e-137 qcov:100.00 identity:95.50;
kegg_pathway_id 02020; 00400;
kegg_pathway_name Two-component system - General; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id TRPSYN-PWY; COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF00218;
pfam_desc Indole-3-glycerol phosphate synthase;
pfam_id IGPS;
pfam_target db:Pfam-A.hmm|PF00218.21 evalue:1.9e-95 score:318.1 best_domain_score:317.9 name:IGPS;
sprot_desc Indole-3-glycerol phosphate synthase;
sprot_id sp|C1DHY7|TRPC_AZOVD;
sprot_target db:uniprot_sprot|sp|C1DHY7|TRPC_AZOVD 7 267 evalue:3.2e-83 qcov:97.80 identity:61.70;
15811 14792 CDS
ID metaerg.pl|08960
allec_ids 2.4.2.18;
allgo_ids GO:0016757; GO:0004048; GO:0000287; GO:0000162;
allko_ids K01656; K00758; K00766; K13501; K01658; K13497;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035583948.1 1 339 evalue:2.9e-175 qcov:100.00 identity:97.60;
kegg_pathway_id 02020; 00983; 00230; 00400; 00240;
kegg_pathway_name Two-component system - General; Drug metabolism - other enzymes; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id TRPSYN-PWY; COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF00591; PF02885;
pfam_desc Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain;
pfam_id Glycos_transf_3; Glycos_trans_3N;
pfam_target db:Pfam-A.hmm|PF00591.21 evalue:8.2e-97 score:323.0 best_domain_score:322.3 name:Glycos_transf_3; db:Pfam-A.hmm|PF02885.17 evalue:1.1e-15 score:56.4 best_domain_score:55.2 name:Glycos_trans_3N;
sprot_desc Anthranilate phosphoribosyltransferase;
sprot_id sp|Q1QV38|TRPD_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QV38|TRPD_CHRSD 1 336 evalue:6.6e-134 qcov:99.10 identity:75.60;
tigrfam_acc TIGR01245;
tigrfam_desc anthranilate phosphoribosyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpD;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01245 evalue:6.2e-125 score:416.0 best_domain_score:415.8 name:TIGR01245;
16438 15848 CDS
ID metaerg.pl|08961
allec_ids 4.1.3.27;
allgo_ids GO:0016787; GO:0004049; GO:0006541; GO:0000162;
allko_ids K01665; K01664; K01954; K00609; K02619; K03342; K11540; K01657; K00766; K01656; K01663; K01956; K13950; K13497; K11541; K01955; K13503; K13501; K01658; K01951;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87631.1 1 196 evalue:1.7e-106 qcov:100.00 identity:95.90;
kegg_pathway_id 00252; 00251; 00620; 02020; 00790; 00983; 00240; 00230; 00400;
kegg_pathway_name Alanine and aspartate metabolism; Glutamate metabolism; Pyruvate metabolism; Two-component system - General; Folate biosynthesis; Drug metabolism - other enzymes; Pyrimidine metabolism; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id PWY-5958; COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; TRPSYN-PWY;
metacyc_pathway_name acridone alkaloid biosynthesis;; superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; L-tryptophan biosynthesis;;
metacyc_pathway_type ALKALOIDS-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; TRYPTOPHAN-BIOSYNTHESIS;;
pfam_acc PF00117; PF07722;
pfam_desc Glutamine amidotransferase class-I; Peptidase C26;
pfam_id GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00117.28 evalue:2.8e-53 score:179.8 best_domain_score:179.5 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:1.3e-07 score:30.8 best_domain_score:29.5 name:Peptidase_C26;
sprot_desc Anthranilate synthase component 2;
sprot_id sp|P00901|TRPG_PSEPU;
sprot_target db:uniprot_sprot|sp|P00901|TRPG_PSEPU 5 195 evalue:7.8e-79 qcov:97.40 identity:72.80;
tigrfam_acc TIGR00566;
tigrfam_desc glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase;
tigrfam_name trpG_papA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00566 evalue:1.2e-83 score:278.7 best_domain_score:278.5 name:TIGR00566;
19372 16583 CDS
ID metaerg.pl|08962
allec_ids 1.17.1.9; 1.2.1.2;
allgo_ids GO:0009055; GO:0051536; GO:0051539; GO:0008863; GO:0046872; GO:0043546; GO:0015942;
allko_ids K00202; K02035; K00240; K08345; K00123; K00370; K00443; K00201; K05299; K15905; K04014; K05813; K00380; K00122; K03934; K00367; K00204; K00376; K00360; K00372; K13483; K00125; K00441; K00336; K02567; K00205; K08348; K00817; K00170; K05588; K00176; K03388; K00124; K00436; K00533; K00203; K02030; K11181; K00265; K00369; K04564; K02027; K02048;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113249.1 1 929 evalue:0.0e+00 qcov:100.00 identity:91.10;
kegg_pathway_id 00720; 00632; 00401; 00400; 02010; 00620; 05012; 00630; 00350; 00650; 00640; 00790; 00920; 00010; 00020; 00633; 00251; 00910; 02020; 00360; 00340; 00190; 00130; 00680;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Benzoate degradation via CoA ligation; Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; ABC transporters - General; Pyruvate metabolism; Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Tyrosine metabolism; Butanoate metabolism; Propanoate metabolism; Folate biosynthesis; Sulfur metabolism; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Trinitrotoluene degradation; Glutamate metabolism; Nitrogen metabolism; Two-component system - General; Phenylalanine metabolism; Histidine metabolism; Oxidative phosphorylation; Ubiquinone biosynthesis; Methane metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metabolic_acc TIGR01591;
metabolic_process compound:C1 compounds;process:Formate oxidation;gene:formate dehydrogenase, alpha subunit;;
metacyc_pathway_id PWY-1882; PWY-5497; P164-PWY; PWY-1881;
metacyc_pathway_name superpathway of C1 compounds oxidation to CO2;; purine nucleobases degradation II (anaerobic);; purine nucleobases degradation I (anaerobic);; formate oxidation to CO2;;
metacyc_pathway_type C1-COMPOUNDS; Super-Pathways;; Fermentation; Purine-Degradation;; Fermentation; Purine-Degradation;; C1-COMPOUNDS; CHEMOAUTOTROPHIC-ENERGY-METABOLISM;;
pfam_acc PF00111; PF13510; PF00037; PF13237; PF12838; PF13183; PF13187; PF00384; PF04879; PF01568;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; 2Fe-2S iron-sulfur cluster binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain; Molydopterin dinucleotide binding domain;
pfam_id Fer2; Fer2_4; Fer4; Fer4_10; Fer4_7; Fer4_8; Fer4_9; Molybdopterin; Molybdop_Fe4S4; Molydop_binding;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:0.00013 score:21.0 best_domain_score:19.4 name:Fer2; db:Pfam-A.hmm|PF13510.6 evalue:4.2e-18 score:64.4 best_domain_score:62.5 name:Fer2_4; db:Pfam-A.hmm|PF00037.27 evalue:4.7e-07 score:28.6 best_domain_score:27.2 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:3.9e-09 score:35.7 best_domain_score:25.8 name:Fer4_10; db:Pfam-A.hmm|PF12838.7 evalue:1.2e-07 score:31.5 best_domain_score:24.6 name:Fer4_7; db:Pfam-A.hmm|PF13183.6 evalue:2e-06 score:27.4 best_domain_score:27.4 name:Fer4_8; db:Pfam-A.hmm|PF13187.6 evalue:8.5e-07 score:28.3 best_domain_score:28.3 name:Fer4_9; db:Pfam-A.hmm|PF00384.22 evalue:1.4e-84 score:283.8 best_domain_score:283.5 name:Molybdopterin; db:Pfam-A.hmm|PF04879.16 evalue:1.4e-15 score:56.3 best_domain_score:54.9 name:Molybdop_Fe4S4; db:Pfam-A.hmm|PF01568.21 evalue:3.7e-26 score:90.6 best_domain_score:87.2 name:Molydop_binding;
sprot_desc Formate dehydrogenase subunit alpha;
sprot_id sp|P61159|FDHA_METJA;
sprot_target db:uniprot_sprot|sp|P61159|FDHA_METJA 238 926 evalue:5.8e-148 qcov:74.20 identity:40.00;
tigrfam_acc TIGR01591;
tigrfam_desc formate dehydrogenase, alpha subunit;
tigrfam_name Fdh-alpha;
tigrfam_target db:TIGRFAMs.hmm|TIGR01591 evalue:2.4e-210 score:699.2 best_domain_score:698.9 name:TIGR01591;
21108 19369 CDS
ID metaerg.pl|08963
allgo_ids GO:0051539;
allko_ids K00122; K05586; K00356; K03943; K00124; K00436; K05587; K00335; K03942; K00334; K00329;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113250.1 1 575 evalue:4.5e-309 qcov:99.30 identity:89.60;
kegg_pathway_id 05012; 00630; 00130; 00190; 00680;
kegg_pathway_name Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Ubiquinone biosynthesis; Oxidative phosphorylation; Methane metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF01257; PF01512; PF10589; PF10531;
pfam_desc Thioredoxin-like [2Fe-2S] ferredoxin; Respiratory-chain NADH dehydrogenase 51 Kd subunit; NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; SLBB domain;
pfam_id 2Fe-2S_thioredx; Complex1_51K; NADH_4Fe-4S; SLBB;
pfam_target db:Pfam-A.hmm|PF01257.19 evalue:6.5e-26 score:90.2 best_domain_score:89.2 name:2Fe-2S_thioredx; db:Pfam-A.hmm|PF01512.17 evalue:2.8e-45 score:153.2 best_domain_score:152.5 name:Complex1_51K; db:Pfam-A.hmm|PF10589.9 evalue:1.7e-23 score:81.7 best_domain_score:79.9 name:NADH_4Fe-4S; db:Pfam-A.hmm|PF10531.9 evalue:2.5e-11 score:42.5 best_domain_score:41.3 name:SLBB;
21305 22225 CDS
ID metaerg.pl|08964
allgo_ids GO:0030001; GO:0046872; GO:0005886; GO:0007155;
allko_ids K19975;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87628.1 1 306 evalue:2.7e-140 qcov:100.00 identity:82.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF01297;
pfam_desc Zinc-uptake complex component A periplasmic;
pfam_id ZnuA;
pfam_target db:Pfam-A.hmm|PF01297.17 evalue:4.7e-62 score:208.9 best_domain_score:208.7 name:ZnuA;
sp YES;
sprot_desc Manganese-binding lipoprotein MntA;
sprot_id sp|Q92AG1|MNTA_LISIN;
sprot_target db:uniprot_sprot|sp|Q92AG1|MNTA_LISIN 8 300 evalue:6.1e-38 qcov:95.80 identity:30.00;
tm_num 1;
21305 21376 signal_peptide
ID metaerg.pl|08965
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
21305 22225 transmembrane_helix
ID metaerg.pl|08966
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i21317-21376o;
23753 22263 CDS
ID metaerg.pl|08967
allec_ids 4.1.3.27;
allgo_ids GO:0009058; GO:0004049; GO:0046872; GO:0000162;
allko_ids K01656; K01663; K01664; K01665; K03342; K02619; K01657; K01658; K13501; K13503; K13950; K13497;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002366715;
genomedb_acc GCA_002366715.1;
genomedb_target db:genomedb|GCA_002366715.1|DFBS01000014.1_46 1 496 evalue:7.0e-279 qcov:100.00 identity:95.60;
kegg_pathway_id 00620; 02020; 00400; 00790;
kegg_pathway_name Pyruvate metabolism; Two-component system - General; Phenylalanine, tyrosine and tryptophan biosynthesis; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; TRPSYN-PWY; PWY-5958;
metacyc_pathway_name superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; L-tryptophan biosynthesis;; acridone alkaloid biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; TRYPTOPHAN-BIOSYNTHESIS;; ALKALOIDS-SYN;;
pfam_acc PF04715; PF00425;
pfam_desc Anthranilate synthase component I, N terminal region; chorismate binding enzyme;
pfam_id Anth_synt_I_N; Chorismate_bind;
pfam_target db:Pfam-A.hmm|PF04715.13 evalue:2.7e-36 score:124.1 best_domain_score:119.1 name:Anth_synt_I_N; db:Pfam-A.hmm|PF00425.18 evalue:2e-98 score:328.3 best_domain_score:327.9 name:Chorismate_bind;
sprot_desc Anthranilate synthase component 1;
sprot_id sp|P20579|TRPE_PSEPU;
sprot_target db:uniprot_sprot|sp|P20579|TRPE_PSEPU 2 491 evalue:3.5e-176 qcov:98.80 identity:63.30;
tigrfam_acc TIGR00564;
tigrfam_desc anthranilate synthase component I;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpE_most;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00564 evalue:2.3e-173 score:576.5 best_domain_score:576.3 name:TIGR00564;
24469 23753 CDS
ID metaerg.pl|08968
allec_ids 3.1.3.18;
allgo_ids GO:0046872; GO:0008967; GO:0005975; GO:0046295;
allko_ids K01838; K01091;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87626.1 5 238 evalue:7.7e-106 qcov:98.30 identity:81.30;
kegg_pathway_id 00630; 00500;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Starch and sucrose metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id PWY-181;
metacyc_pathway_name photorespiration;;
metacyc_pathway_type Photosynthesis;;
pfam_acc PF12710; PF13419; PF00702; PF13242;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD; HAD_2; Hydrolase; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:3.4e-09 score:36.6 best_domain_score:35.6 name:HAD; db:Pfam-A.hmm|PF13419.6 evalue:2e-31 score:108.7 best_domain_score:108.4 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:2.8e-20 score:72.7 best_domain_score:70.8 name:Hydrolase; db:Pfam-A.hmm|PF13242.6 evalue:2.9e-10 score:39.3 best_domain_score:38.5 name:Hydrolase_like;
sprot_desc Phosphoglycolate phosphatase;
sprot_id sp|Q88QS2|GPH_PSEPK;
sprot_target db:uniprot_sprot|sp|Q88QS2|GPH_PSEPK 17 229 evalue:1.1e-50 qcov:89.50 identity:52.30;
tigrfam_acc TIGR01449; TIGR01509; TIGR01549; TIGR01662;
tigrfam_desc phosphoglycolate phosphatase, bacterial; HAD hydrolase, family IA, variant 3; HAD hydrolase, family IA, variant 1; HAD hydrolase, family IIIA;
tigrfam_mainrole Energy metabolism; Unknown function; Unknown function; Unknown function;
tigrfam_name PGP_bact; HAD-SF-IA-v3; HAD-SF-IA-v1; HAD-SF-IIIA;
tigrfam_sub1role Sugars; Enzymes of unknown specificity; Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01449 evalue:9.1e-67 score:223.8 best_domain_score:223.5 name:TIGR01449; db:TIGRFAMs.hmm|TIGR01509 evalue:6.1e-12 score:45.1 best_domain_score:31.6 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01549 evalue:6e-13 score:48.6 best_domain_score:37.1 name:TIGR01549; db:TIGRFAMs.hmm|TIGR01662 evalue:1.5e-12 score:47.0 best_domain_score:36.3 name:TIGR01662;
24698 25996 CDS
ID metaerg.pl|08969
allec_ids 1.6.99.3;
allgo_ids GO:0016491; GO:0055114; GO:0030964; GO:0005886; GO:0050660; GO:0008137; GO:0019646; GO:0009060; GO:0009061; GO:0055070;
allko_ids K03885; K00356; K01008;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87625.1 1 432 evalue:2.4e-222 qcov:100.00 identity:88.40;
kegg_pathway_id 00190; 00450;
kegg_pathway_name Oxidative phosphorylation; Selenoamino acid metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF13450; PF13454; PF00070; PF07992;
pfam_desc NAD(P)-binding Rossmann-like domain; FAD-NAD(P)-binding; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id NAD_binding_8; NAD_binding_9; Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF13450.6 evalue:1.9e-05 score:24.1 best_domain_score:17.3 name:NAD_binding_8; db:Pfam-A.hmm|PF13454.6 evalue:4.1e-08 score:32.6 best_domain_score:21.9 name:NAD_binding_9; db:Pfam-A.hmm|PF00070.27 evalue:7.8e-14 score:51.2 best_domain_score:41.2 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:3.2e-58 score:196.5 best_domain_score:196.3 name:Pyr_redox_2;
sprot_desc NADH dehydrogenase;
sprot_id sp|P00393|DHNA_ECOLI;
sprot_target db:uniprot_sprot|sp|P00393|DHNA_ECOLI 3 432 evalue:1.5e-122 qcov:99.50 identity:50.30;
26703 26008 CDS
ID metaerg.pl|08970
allec_ids 5.1.3.1;
allgo_ids GO:0004514; GO:0009435; GO:0046872; GO:0004750; GO:0005975; GO:0006098;
allko_ids K01783;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87624.1 1 231 evalue:1.5e-122 qcov:100.00 identity:96.50;
kegg_pathway_id 00040; 00030; 00710;
kegg_pathway_name Pentose and glucuronate interconversions; Pentose phosphate pathway; Carbon fixation in photosynthetic organisms;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id PWY-1861; NONOXIPENT-PWY; P185-PWY; P124-PWY; RIBITOLUTIL-PWY; PWY-5723; PHOTOALL-PWY; CALVIN-PWY; DARABCAT-PWY; P122-PWY; P21-PWY; PENTOSE-P-PWY;
metacyc_pathway_name formaldehyde assimilation II (assimilatory RuMP Cycle);; pentose phosphate pathway (non-oxidative branch);; formaldehyde assimilation III (dihydroxyacetone cycle);; Bifidobacterium shunt;; ribitol degradation;; Rubisco shunt;; oxygenic photosynthesis;; Calvin-Benson-Bassham cycle;; D-arabinose degradation II;; heterolactic fermentation;; pentose phosphate pathway (partial);; pentose phosphate pathway;;
metacyc_pathway_type Formaldehyde-Assimilation;; Pentose-Phosphate-Cycle;; Formaldehyde-Assimilation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; SUGAR-ALCOHOLS-DEG;; Energy-Metabolism;; Photosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; D-Arabinose-Degradation;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Pentose-Phosphate-Cycle;; Pentose-Phosphate-Cycle; Super-Pathways;;
pfam_acc PF01729; PF00834;
pfam_desc Quinolinate phosphoribosyl transferase, C-terminal domain; Ribulose-phosphate 3 epimerase family;
pfam_id QRPTase_C; Ribul_P_3_epim;
pfam_target db:Pfam-A.hmm|PF01729.19 evalue:7.5e-07 score:28.3 best_domain_score:18.8 name:QRPTase_C; db:Pfam-A.hmm|PF00834.19 evalue:3.3e-90 score:300.0 best_domain_score:299.8 name:Ribul_P_3_epim;
sprot_desc Ribulose-phosphate 3-epimerase;
sprot_id sp|P0AG09|RPE_ECO57;
sprot_target db:uniprot_sprot|sp|P0AG09|RPE_ECO57 5 230 evalue:1.6e-94 qcov:97.80 identity:76.50;
tigrfam_acc TIGR01163;
tigrfam_desc ribulose-phosphate 3-epimerase;
tigrfam_mainrole Energy metabolism;
tigrfam_name rpe;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR01163 evalue:9.6e-94 score:311.8 best_domain_score:311.6 name:TIGR01163;
26974 27984 CDS
ID metaerg.pl|08971
allgo_ids GO:0030288; GO:0015419; GO:0043199; GO:0036173; GO:0008272; GO:0006790; GO:0015709;
allko_ids K02048;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002966495;
genomedb_acc GCF_002966495.1;
genomedb_target db:genomedb|GCF_002966495.1|WP_009096452.1 1 336 evalue:3.6e-178 qcov:100.00 identity:92.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF01547; PF13531; PF13343; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_11; SBP_bac_6; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:5.6e-14 score:52.0 best_domain_score:51.4 name:SBP_bac_1; db:Pfam-A.hmm|PF13531.6 evalue:5.3e-37 score:127.0 best_domain_score:126.6 name:SBP_bac_11; db:Pfam-A.hmm|PF13343.6 evalue:7.5e-09 score:34.6 best_domain_score:34.2 name:SBP_bac_6; db:Pfam-A.hmm|PF13416.6 evalue:1.7e-09 score:37.2 best_domain_score:36.6 name:SBP_bac_8;
sp YES;
sprot_desc Thiosulfate-binding protein;
sprot_id sp|P16700|CYSP_ECOLI;
sprot_target db:uniprot_sprot|sp|P16700|CYSP_ECOLI 13 333 evalue:3.4e-106 qcov:95.50 identity:58.80;
tigrfam_acc TIGR00971;
tigrfam_desc sulfate ABC transporter, sulfate-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3a0106s03;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00971 evalue:6.7e-130 score:432.1 best_domain_score:431.8 name:TIGR00971;
26974 27051 signal_peptide
ID metaerg.pl|08972
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
27994 28848 CDS
ID metaerg.pl|08973
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015419;
allko_ids K02011; K02046; K02018;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086994.1 1 284 evalue:1.2e-145 qcov:100.00 identity:96.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.6e-22 score:79.4 best_domain_score:79.4 name:BPD_transp_1;
sprot_desc Sulfate transport system permease protein CysT;
sprot_id sp|P41032|CYST_SALTY;
sprot_target db:uniprot_sprot|sp|P41032|CYST_SALTY 11 281 evalue:4.8e-85 qcov:95.40 identity:60.90;
tigrfam_acc TIGR00969; TIGR02139;
tigrfam_desc sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT;
tigrfam_mainrole Transport and binding proteins; Transport and binding proteins;
tigrfam_name 3a0106s02; permease_CysT;
tigrfam_sub1role Anions; Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00969 evalue:7.9e-94 score:313.3 best_domain_score:313.0 name:TIGR00969; db:TIGRFAMs.hmm|TIGR02139 evalue:4.1e-113 score:376.5 best_domain_score:376.3 name:TIGR02139;
tm_num 7;
27994 28848 transmembrane_helix
ID metaerg.pl|08974
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology o28051-28119i28177-28245o28303-28371i28408-28476o28555-28623i28642-28710o28738-28806i;
28848 29675 CDS
ID metaerg.pl|08975
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015419;
allko_ids K02047;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87621.1 1 275 evalue:3.4e-142 qcov:100.00 identity:97.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:5.6e-15 score:54.8 best_domain_score:54.8 name:BPD_transp_1;
sprot_desc Sulfate transport system permease protein CysW;
sprot_id sp|P0AEB1|CYSW_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AEB1|CYSW_ECOL6 14 275 evalue:2.1e-90 qcov:95.30 identity:63.70;
tigrfam_acc TIGR00969; TIGR02140;
tigrfam_desc sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysW;
tigrfam_mainrole Transport and binding proteins; Transport and binding proteins;
tigrfam_name 3a0106s02; permease_CysW;
tigrfam_sub1role Anions; Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00969 evalue:2.5e-99 score:331.3 best_domain_score:331.0 name:TIGR00969; db:TIGRFAMs.hmm|TIGR02140 evalue:2.3e-118 score:393.5 best_domain_score:393.3 name:TIGR02140;
tm_num 6;
28848 29675 transmembrane_helix
ID metaerg.pl|08976
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i28884-28952o29028-29096i29130-29198o29241-29309i29424-29492o29559-29627i;
29672 30766 CDS
ID metaerg.pl|08977
allec_ids 7.3.2.3; 3.6.3.25;
allgo_ids GO:0005524; GO:0043190; GO:0016887; GO:0015419; GO:0102025; GO:0008272;
allko_ids K01998; K10112; K10111; K02049; K01995; K02065; K11076; K02013; K06857; K05816; K10235; K10000; K02018; K02023; K09812; K01990; K10243; K02000; K11962; K02004; K02052; K02006; K05847; K02010; K02003; K01997; K02017; K02032; K11084; K10199; K01996; K06861; K02071; K02028; K02068; K11072; K02045; K06020; K02062;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87620.1 1 364 evalue:2.2e-197 qcov:100.00 identity:94.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF13304; PF00005; PF03459; PF08402; PF12857;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; TOBE domain; TOBE domain; TOBE-like domain;
pfam_id AAA_21; ABC_tran; TOBE; TOBE_2; TOBE_3;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.3e-09 score:37.6 best_domain_score:20.0 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:5.5e-33 score:113.6 best_domain_score:112.8 name:ABC_tran; db:Pfam-A.hmm|PF03459.17 evalue:6.2e-05 score:22.5 best_domain_score:15.0 name:TOBE; db:Pfam-A.hmm|PF08402.10 evalue:0.00012 score:21.4 best_domain_score:18.8 name:TOBE_2; db:Pfam-A.hmm|PF12857.7 evalue:1.5e-14 score:52.9 best_domain_score:48.0 name:TOBE_3;
sprot_desc Sulfate/thiosulfate import ATP-binding protein CysA 1;
sprot_id sp|Q8EBC3|CYSA1_SHEON;
sprot_target db:uniprot_sprot|sp|Q8EBC3|CYSA1_SHEON 1 345 evalue:2.7e-117 qcov:94.80 identity:62.80;
tigrfam_acc TIGR00968;
tigrfam_desc sulfate ABC transporter, ATP-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3a0106s01;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00968 evalue:3e-112 score:373.1 best_domain_score:372.8 name:TIGR00968;
31455 30838 CDS
ID metaerg.pl|08978
allec_ids 1.14.11.33;
allgo_ids GO:0005634; GO:0103053; GO:0051747; GO:0035514; GO:0043734; GO:0008198; GO:0006307; GO:0006281; GO:0035511;
allko_ids K10859;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086991.1 1 204 evalue:3.8e-93 qcov:99.50 identity:77.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF13532;
pfam_desc 2OG-Fe(II) oxygenase superfamily;
pfam_id 2OG-FeII_Oxy_2;
pfam_target db:Pfam-A.hmm|PF13532.6 evalue:2.4e-25 score:89.1 best_domain_score:89.0 name:2OG-FeII_Oxy_2;
sprot_desc DNA oxidative demethylase ALKBH2;
sprot_id sp|Q9SIE0|ALKB2_ARATH;
sprot_target db:uniprot_sprot|sp|Q9SIE0|ALKB2_ARATH 39 201 evalue:2.5e-19 qcov:79.50 identity:33.70;
32862 31465 CDS
ID metaerg.pl|08979
allec_ids 3.4.13.-;
allgo_ids GO:0016787; GO:0005829; GO:0005634; GO:0046872; GO:0070573; GO:0006751;
allko_ids K01439; K01438; K15428;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Actibacterium;s__Actibacterium atlanticum;
genomedb_acc GCF_000671395.1;
genomedb_target db:genomedb|GCF_000671395.1|WP_035247012.1 6 455 evalue:6.3e-120 qcov:96.80 identity:47.50;
kegg_pathway_id 00300; 00220;
kegg_pathway_name Lysine biosynthesis; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:7.1e-19 score:67.0 best_domain_score:66.2 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:2.7e-30 score:104.8 best_domain_score:104.5 name:Peptidase_M20;
sprot_desc Cys-Gly metallodipeptidase dug1;
sprot_id sp|Q9P6I2|DUG1_SCHPO;
sprot_target db:uniprot_sprot|sp|Q9P6I2|DUG1_SCHPO 6 455 evalue:2.2e-47 qcov:96.80 identity:29.60;
33812 32877 CDS
ID metaerg.pl|08980
allgo_ids GO:0016787;
allko_ids K01432; K01046; K01181;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__NIES-4103;s__NIES-4103 sp002368335;
genomedb_acc GCF_002368335.1;
genomedb_target db:genomedb|GCF_002368335.1|WP_096558269.1 3 303 evalue:1.4e-70 qcov:96.80 identity:46.00;
kegg_pathway_id 00630; 00380; 00561;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Tryptophan metabolism; Glycerolipid metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF07859; PF10340;
pfam_desc alpha/beta hydrolase fold; Steryl acetyl hydrolase;
pfam_id Abhydrolase_3; Say1_Mug180;
pfam_target db:Pfam-A.hmm|PF07859.13 evalue:4.8e-49 score:166.3 best_domain_score:165.9 name:Abhydrolase_3; db:Pfam-A.hmm|PF10340.9 evalue:2.3e-07 score:29.2 best_domain_score:28.7 name:Say1_Mug180;
35082 33814 CDS
ID metaerg.pl|08981
allec_ids 6.3.2.47;
allgo_ids GO:0005524; GO:0046872; GO:0016874; GO:0017000;
allko_ids K22114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Chania;s__Chania multitudinisentens;
genomedb_acc GCF_000520015.2;
genomedb_target db:genomedb|GCF_000520015.2|WP_024912484.1 5 414 evalue:1.2e-101 qcov:97.20 identity:44.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF02655; PF13535; PF01071;
pfam_desc ATP-grasp domain; ATP-grasp domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain;
pfam_id ATP-grasp_3; ATP-grasp_4; GARS_A;
pfam_target db:Pfam-A.hmm|PF02655.14 evalue:8.8e-08 score:31.6 best_domain_score:30.2 name:ATP-grasp_3; db:Pfam-A.hmm|PF13535.6 evalue:2.7e-12 score:45.8 best_domain_score:44.6 name:ATP-grasp_4; db:Pfam-A.hmm|PF01071.19 evalue:9.4e-05 score:21.5 best_domain_score:17.5 name:GARS_A;
sprot_desc Dapdiamide A synthase;
sprot_id sp|E2JA31|DDAF_ENTAG;
sprot_target db:uniprot_sprot|sp|E2JA31|DDAF_ENTAG 2 413 evalue:1.7e-25 qcov:97.60 identity:25.00;
35429 35079 CDS
ID metaerg.pl|08982
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Xenorhabdus;s__Xenorhabdus mauleonii;
genomedb_acc GCF_900113945.1;
genomedb_target db:genomedb|GCF_900113945.1|WP_092509871.1 1 104 evalue:4.2e-17 qcov:89.70 identity:34.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
36493 35420 CDS
ID metaerg.pl|08983
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Xenorhabdus;s__Xenorhabdus mauleonii;
genomedb_acc GCF_900113945.1;
genomedb_target db:genomedb|GCF_900113945.1|WP_092509873.1 1 356 evalue:1.2e-139 qcov:99.70 identity:66.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF14518;
pfam_desc Iron-containing redox enzyme;
pfam_id Haem_oxygenas_2;
pfam_target db:Pfam-A.hmm|PF14518.6 evalue:1.5e-24 score:85.9 best_domain_score:85.4 name:Haem_oxygenas_2;
36853 36518 CDS
ID metaerg.pl|08984
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Xenorhabdus;s__Xenorhabdus mauleonii;
genomedb_acc GCF_900113945.1;
genomedb_target db:genomedb|GCF_900113945.1|WP_092509873.1 4 96 evalue:1.8e-28 qcov:83.80 identity:63.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
37790 36843 CDS
ID metaerg.pl|08985
allec_ids 2.1.1.320;
allgo_ids GO:0016429; GO:0030488; GO:0031515; GO:0005737; GO:0016274; GO:0006397;
allko_ids K19737;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Xenorhabdus;s__Xenorhabdus mauleonii;
genomedb_acc GCF_900113945.1;
genomedb_target db:genomedb|GCF_900113945.1|WP_092509875.1 24 311 evalue:7.3e-80 qcov:91.40 identity:52.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF03602; PF08704; PF10294; PF02475; PF05175; PF01135; PF06325; PF00398;
pfam_desc Conserved hypothetical protein 95; tRNA methyltransferase complex GCD14 subunit; Lysine methyltransferase; Met-10+ like-protein; Methyltransferase small domain; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Ribosomal protein L11 methyltransferase (PrmA); Ribosomal RNA adenine dimethylase;
pfam_id Cons_hypoth95; GCD14; Methyltransf_16; Met_10; MTS; PCMT; PrmA; RrnaAD;
pfam_target db:Pfam-A.hmm|PF03602.15 evalue:3.1e-06 score:26.2 best_domain_score:25.5 name:Cons_hypoth95; db:Pfam-A.hmm|PF08704.10 evalue:0.0002 score:20.3 best_domain_score:19.0 name:GCD14; db:Pfam-A.hmm|PF10294.9 evalue:9.7e-08 score:31.2 best_domain_score:30.5 name:Methyltransf_16; db:Pfam-A.hmm|PF02475.16 evalue:5.2e-05 score:22.3 best_domain_score:21.9 name:Met_10; db:Pfam-A.hmm|PF05175.14 evalue:9.1e-06 score:24.5 best_domain_score:23.8 name:MTS; db:Pfam-A.hmm|PF01135.19 evalue:7e-05 score:21.9 best_domain_score:21.2 name:PCMT; db:Pfam-A.hmm|PF06325.13 evalue:5.9e-11 score:41.5 best_domain_score:40.9 name:PrmA; db:Pfam-A.hmm|PF00398.20 evalue:1.9e-05 score:23.1 best_domain_score:22.4 name:RrnaAD;
sprot_desc hypothetical protein;
sprot_id sp|A0JMU5|ANM9_XENLA;
sprot_target db:uniprot_sprot|sp|A0JMU5|ANM9_XENLA 30 281 evalue:1.3e-14 qcov:80.00 identity:26.00;
38509 37805 CDS
ID metaerg.pl|08986
allgo_ids GO:0016491; GO:0055114;
allko_ids K09990;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Niveispirillum;s__Niveispirillum cyanobacteriorum;
genomedb_acc GCF_002868735.1;
genomedb_target db:genomedb|GCF_002868735.1|WP_102111279.1 10 233 evalue:3.5e-71 qcov:95.70 identity:54.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF13640; PF09859;
pfam_desc 2OG-Fe(II) oxygenase superfamily; Oxygenase, catalysing oxidative methylation of damaged DNA;
pfam_id 2OG-FeII_Oxy_3; Oxygenase-NA;
pfam_target db:Pfam-A.hmm|PF13640.6 evalue:3.5e-08 score:33.5 best_domain_score:32.8 name:2OG-FeII_Oxy_3; db:Pfam-A.hmm|PF09859.9 evalue:4e-78 score:260.1 best_domain_score:259.7 name:Oxygenase-NA;
sprot_desc hypothetical protein;
sprot_id sp|P9WLH6|Y2227_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WLH6|Y2227_MYCTO 70 233 evalue:2.6e-36 qcov:70.10 identity:43.90;
39509 38511 CDS
ID metaerg.pl|08987
allec_ids 2.5.1.47;
allgo_ids GO:0004124; GO:0006535;
allko_ids K01738; K10150; K12339; K13034; K01754; K01697; K01733;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_B;s__Pseudomonas_B oryzihabitans;
genomedb_acc GCF_000730625.1;
genomedb_target db:genomedb|GCF_000730625.1|WP_042133058.1 20 325 evalue:1.0e-108 qcov:92.20 identity:65.00;
kegg_pathway_id 00260; 00272; 00750; 00920; 00271; 00450; 00290;
kegg_pathway_name Glycine, serine and threonine metabolism; Cysteine metabolism; Vitamin B6 metabolism; Sulfur metabolism; Methionine metabolism; Selenoamino acid metabolism; Valine, leucine and isoleucine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id SULFATE-CYS-PWY; CYSTSYN-PWY;
metacyc_pathway_name superpathway of sulfate assimilation and cysteine biosynthesis;; L-cysteine biosynthesis I;;
metacyc_pathway_type Sulfur-Metabolism; Super-Pathways;; CYSTEINE-SYN;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:2.5e-59 score:200.4 best_domain_score:200.2 name:PALP;
sprot_desc Cysteine synthase;
sprot_id sp|Q5HRP1|CYSK_STAEQ;
sprot_target db:uniprot_sprot|sp|Q5HRP1|CYSK_STAEQ 27 326 evalue:6.2e-52 qcov:90.40 identity:41.40;
40672 40169 CDS
ID metaerg.pl|08988
allgo_ids GO:0015074; GO:0003676;
allko_ids K07497;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_085940833.1 1 167 evalue:1.5e-87 qcov:100.00 identity:93.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00665; PF13333; PF13683;
pfam_desc Integrase core domain; Integrase core domain; Integrase core domain;
pfam_id rve; rve_2; rve_3;
pfam_target db:Pfam-A.hmm|PF00665.26 evalue:4.5e-16 score:58.3 best_domain_score:57.7 name:rve; db:Pfam-A.hmm|PF13333.6 evalue:1.6e-05 score:24.2 best_domain_score:23.5 name:rve_2; db:Pfam-A.hmm|PF13683.6 evalue:2.4e-28 score:97.0 best_domain_score:96.5 name:rve_3;
sprot_desc Insertion element IS407 uncharacterized 31.7 kDa protein;
sprot_id sp|P24577|YI71_BURM1;
sprot_target db:uniprot_sprot|sp|P24577|YI71_BURM1 1 148 evalue:1.8e-44 qcov:88.60 identity:58.80;
41033 40737 CDS
ID metaerg.pl|08989
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002366715;
genomedb_acc GCA_002366715.1;
genomedb_target db:genomedb|GCA_002366715.1|DFBS01000045.1_294 1 94 evalue:1.4e-37 qcov:95.90 identity:93.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF13276;
pfam_desc HTH-like domain;
pfam_id HTH_21;
pfam_target db:Pfam-A.hmm|PF13276.6 evalue:1.3e-11 score:43.7 best_domain_score:42.9 name:HTH_21;
41293 41030 CDS
ID metaerg.pl|08990
allgo_ids GO:0003677; GO:0004803; GO:0006313;
allko_ids K07497;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_007113604.1 1 87 evalue:1.7e-39 qcov:100.00 identity:97.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF01527;
pfam_desc Transposase;
pfam_id HTH_Tnp_1;
pfam_target db:Pfam-A.hmm|PF01527.20 evalue:4.4e-19 score:67.8 best_domain_score:67.3 name:HTH_Tnp_1;
sprot_desc Insertion element IS407 uncharacterized 10.0 kDa protein;
sprot_id sp|P24580|YI74_BURM1;
sprot_target db:uniprot_sprot|sp|P24580|YI74_BURM1 1 86 evalue:1.4e-27 qcov:98.90 identity:66.30;
41499 42581 CDS
ID metaerg.pl|08991
allec_ids 2.1.1.n11; 2.1.1.63;
allgo_ids GO:0003677; GO:0006281; GO:0006355; GO:0008168; GO:0008270; GO:0003700; GO:0003908; GO:0043565; GO:0006974; GO:0006307; GO:0080111; GO:0045892; GO:0018125; GO:0045893;
allko_ids K01247; K13531; K13530; K13529; K10778; K00567;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_F;s__Pseudomonas_F otitidis;
genomedb_acc GCF_900111835.1;
genomedb_target db:genomedb|GCF_900111835.1|WP_044406829.1 11 355 evalue:1.0e-114 qcov:95.80 identity:57.80;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF02805; PF01035; PF12833; PF00165;
pfam_desc Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id Ada_Zn_binding; DNA_binding_1; HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF02805.16 evalue:9.3e-22 score:76.1 best_domain_score:75.0 name:Ada_Zn_binding; db:Pfam-A.hmm|PF01035.20 evalue:5.3e-31 score:105.8 best_domain_score:104.6 name:DNA_binding_1; db:Pfam-A.hmm|PF12833.7 evalue:8.8e-16 score:57.2 best_domain_score:56.2 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:1.5e-10 score:40.1 best_domain_score:33.8 name:HTH_AraC;
sprot_desc Bifunctional transcriptional activator/DNA repair enzyme Ada;
sprot_id sp|P06134|ADA_ECOLI;
sprot_target db:uniprot_sprot|sp|P06134|ADA_ECOLI 13 360 evalue:4.6e-77 qcov:96.70 identity:42.70;
tigrfam_acc TIGR00589;
tigrfam_desc methylated-DNA--[protein]-cysteine S-methyltransferase;
tigrfam_mainrole DNA metabolism;
tigrfam_name ogt;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00589 evalue:1e-33 score:114.4 best_domain_score:113.0 name:TIGR00589;
42887 43786 CDS
ID metaerg.pl|08992
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086990.1 1 298 evalue:7.8e-140 qcov:99.70 identity:86.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.1e-31 score:109.1 best_domain_score:62.1 name:EamA;
tm_num 10;
42887 43786 transmembrane_helix
ID metaerg.pl|08993
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i42905-42961o42989-43048i43085-43153o43163-43231i43250-43303o43313-43381i43430-43498o43526-43594i43613-43681o43694-43753i;
44116 44862 CDS
ID metaerg.pl|08994
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E sp001705835;
genomedb_acc GCF_001705835.1;
genomedb_target db:genomedb|GCF_001705835.1|WP_068576936.1 3 236 evalue:5.2e-73 qcov:94.40 identity:60.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
tm_num 8;
44116 44862 transmembrane_helix
ID metaerg.pl|08995
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i44128-44181o44194-44262i44281-44349o44377-44445i44503-44556o44566-44634i44653-44721o44731-44799i;
44945 45538 CDS
ID metaerg.pl|08996
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035583964.1 1 197 evalue:1.2e-96 qcov:100.00 identity:93.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF03923;
pfam_desc Uncharacterized lipoprotein;
pfam_id Lipoprotein_16;
pfam_target db:Pfam-A.hmm|PF03923.13 evalue:1.9e-13 score:49.6 best_domain_score:49.4 name:Lipoprotein_16;
sp YES;
44945 45007 lipoprotein_signal_peptide
ID metaerg.pl|08997
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
46238 45606 CDS
ID metaerg.pl|08998
allec_ids 2.1.1.67;
allgo_ids GO:0008757; GO:0005737; GO:0008119; GO:0010038;
allko_ids K00569;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035583966.1 1 210 evalue:4.5e-110 qcov:100.00 identity:91.90;
kegg_pathway_id 00983;
kegg_pathway_name Drug metabolism - other enzymes;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF05724;
pfam_desc Thiopurine S-methyltransferase (TPMT);
pfam_id TPMT;
pfam_target db:Pfam-A.hmm|PF05724.11 evalue:3.1e-61 score:206.0 best_domain_score:205.8 name:TPMT;
sprot_desc Thiopurine S-methyltransferase;
sprot_id sp|A4XVB5|TPMT_PSEMY;
sprot_target db:uniprot_sprot|sp|A4XVB5|TPMT_PSEMY 5 187 evalue:1.4e-44 qcov:87.10 identity:45.70;
46922 46287 CDS
ID metaerg.pl|08999
allgo_ids GO:0016021;
allko_ids K07184;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008959578.1 1 211 evalue:6.6e-101 qcov:100.00 identity:91.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF08239;
pfam_desc Bacterial SH3 domain;
pfam_id SH3_3;
pfam_target db:Pfam-A.hmm|PF08239.11 evalue:2.5e-11 score:42.9 best_domain_score:41.9 name:SH3_3;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P0ADU0|YGIM_ECO57;
sprot_target db:uniprot_sprot|sp|P0ADU0|YGIM_ECO57 18 210 evalue:4.8e-34 qcov:91.50 identity:40.00;
tigrfam_acc TIGR04211;
tigrfam_desc SH3 domain protein;
tigrfam_name SH3_and_anchor;
tigrfam_target db:TIGRFAMs.hmm|TIGR04211 evalue:4e-51 score:172.6 best_domain_score:172.2 name:TIGR04211;
tm_num 1;
46287 46370 signal_peptide
ID metaerg.pl|09000
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
46922 46287 transmembrane_helix
ID metaerg.pl|09001
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology o46821-46889i;
47340 47011 CDS
ID metaerg.pl|09002
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF56780.1 1 109 evalue:6.3e-55 qcov:100.00 identity:99.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF08850;
pfam_desc Domain of unknown function (DUF1820);
pfam_id DUF1820;
pfam_target db:Pfam-A.hmm|PF08850.11 evalue:1.2e-34 score:117.9 best_domain_score:117.7 name:DUF1820;
47535 48758 CDS
ID metaerg.pl|09003
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008959580.1 1 407 evalue:2.1e-241 qcov:100.00 identity:99.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
48789 50834 CDS
ID metaerg.pl|09004
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035583973.1 1 681 evalue:0.0e+00 qcov:100.00 identity:93.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
50853 51614 CDS
ID metaerg.pl|09005
allec_ids 2.1.1.-;
allgo_ids GO:0008168; GO:0032259; GO:0003723; GO:0006364;
allko_ids K06442;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035583975.1 1 249 evalue:1.4e-113 qcov:98.40 identity:84.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id CODH-PWY; PWY-6442; PWY-6575; PWY-6477; PWY-5467; PWY-6153; ALL-CHORISMATE-PWY; PWY-3542; PWY-4021; PWY-5041; PWY-5864; PWY-5975; PWY-1061; PWY-5876; PWY-1422; PWY-5729; PWY-6113; PWY-5305; PWYG-321; PWY-5857; PWY-6303; PWY-6151; PWY-5855; PWY-5209; UBISYN-PWY; PWY-6154; PWY-6424; PWY-6142; PWY-5856; METH-ACETATE-PWY; PWY-6519; PWY-5773; PWY-5328; METHIONINE-DEG1-PWY; PWY-1581; PWY-5116; CO2FORM-PWY; PWY-6292; PWY-5987; PWY-5479; PWY-6427; PWY-6395; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135;
metacyc_pathway_name reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; gibberellin inactivation II (methylation);; gramine biosynthesis;; autoinducer AI-2 biosynthesis I;; superpathway of chorismate metabolism;; choline biosynthesis II;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; vitamin E biosynthesis (tocopherols);; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; S-adenosyl-L-methionine cycle I;; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; methanogenesis from acetate;; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; plastoquinol-9 biosynthesis I;; sakuranetin biosynthesis;; methanogenesis from methanol;; superpathway of L-cysteine biosynthesis (mammalian);; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; xanthohumol biosynthesis;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; Autoinducer-Biosynthesis;; Super-Pathways;; Choline-Biosynthesis;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Super-Pathways; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; Plastoquinone-Biosynthesis;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; C1-COMPOUNDS; METHANOGENESIS;; CYSTEINE-SYN; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;;
pfam_acc PF01728; PF01479;
pfam_desc FtsJ-like methyltransferase; S4 domain;
pfam_id FtsJ; S4;
pfam_target db:Pfam-A.hmm|PF01728.19 evalue:3.4e-21 score:75.4 best_domain_score:75.0 name:FtsJ; db:Pfam-A.hmm|PF01479.25 evalue:3e-08 score:32.5 best_domain_score:31.3 name:S4;
sprot_desc Putative rRNA methyltransferase YqxC;
sprot_id sp|P19672|YQXC_BACSU;
sprot_target db:uniprot_sprot|sp|P19672|YQXC_BACSU 3 247 evalue:5.4e-40 qcov:96.80 identity:44.10;
tigrfam_acc TIGR00478;
tigrfam_desc TlyA family rRNA methyltransferase/putative hemolysin;
tigrfam_mainrole Unknown function;
tigrfam_name tly;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00478 evalue:9.5e-56 score:187.8 best_domain_score:187.6 name:TIGR00478;
54961 51611 CDS
ID metaerg.pl|09006
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0009992; GO:0006813;
allko_ids K05802;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002366715;
genomedb_acc GCA_002366715.1;
genomedb_target db:genomedb|GCA_002366715.1|DFBS01000014.1_31 1 1111 evalue:0.0e+00 qcov:99.60 identity:87.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF12795; PF12794; PF00924;
pfam_desc Mechanosensitive ion channel porin domain; Mechanosensitive ion channel inner membrane domain 1; Mechanosensitive ion channel;
pfam_id MscS_porin; MscS_TM; MS_channel;
pfam_target db:Pfam-A.hmm|PF12795.7 evalue:1.4e-31 score:109.1 best_domain_score:109.1 name:MscS_porin; db:Pfam-A.hmm|PF12794.7 evalue:3.8e-81 score:271.8 best_domain_score:271.8 name:MscS_TM; db:Pfam-A.hmm|PF00924.18 evalue:5.2e-55 score:185.4 best_domain_score:185.4 name:MS_channel;
sp YES;
sprot_desc Mechanosensitive channel MscK;
sprot_id sp|P77338|MSCK_ECOLI;
sprot_target db:uniprot_sprot|sp|P77338|MSCK_ECOLI 4 1098 evalue:1.7e-165 qcov:98.10 identity:35.10;
tm_num 12;
51611 51694 signal_peptide
ID metaerg.pl|09007
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
54961 51611 transmembrane_helix
ID metaerg.pl|09008
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i51635-51703o53102-53170i53258-53326o53354-53422i53483-53551o53561-53629i53666-53734o53777-53845i53990-54058o54116-54184i54242-54310o54353-54421i;
55126 56157 CDS
ID metaerg.pl|09009
allec_ids 3.1.1.32;
allgo_ids GO:0004620; GO:0006629; GO:0016020; GO:0009279; GO:0016021; GO:0052740; GO:0046872; GO:0052739; GO:0008970; GO:0004623; GO:0102567; GO:0102568; GO:0016042;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF56775.1 1 343 evalue:6.8e-172 qcov:100.00 identity:86.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id LIPASYN-PWY;
metacyc_pathway_name phospholipases;;
metacyc_pathway_type Fatty-Acid-and-Lipid-Degradation; Metabolic-Clusters;;
pfam_acc PF02253;
pfam_desc Phospholipase A1;
pfam_id PLA1;
pfam_target db:Pfam-A.hmm|PF02253.15 evalue:2.3e-94 score:315.0 best_domain_score:314.8 name:PLA1;
sp YES;
sprot_desc Phospholipase A1;
sprot_id sp|P37446|PA1_KLEPN;
sprot_target db:uniprot_sprot|sp|P37446|PA1_KLEPN 90 336 evalue:3.8e-44 qcov:72.00 identity:38.90;
55126 55203 signal_peptide
ID metaerg.pl|09010
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
56235 56564 CDS
ID metaerg.pl|09011
allgo_ids GO:0043022; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035563274.1 1 109 evalue:9.7e-48 qcov:100.00 identity:92.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF05957;
pfam_desc Bacterial protein of unknown function (DUF883);
pfam_id DUF883;
pfam_target db:Pfam-A.hmm|PF05957.13 evalue:1.3e-27 score:95.5 best_domain_score:95.2 name:DUF883;
sprot_desc hypothetical protein;
sprot_id sp|P64583|YQJD_ECO57;
sprot_target db:uniprot_sprot|sp|P64583|YQJD_ECO57 12 109 evalue:2.4e-13 qcov:89.90 identity:40.80;
56564 56968 CDS
ID metaerg.pl|09012
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_035583981.1 1 134 evalue:2.9e-54 qcov:100.00 identity:97.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF07332;
pfam_desc Putative Actinobacterial Holin-X, holin superfamily III;
pfam_id Phage_holin_3_6;
pfam_target db:Pfam-A.hmm|PF07332.11 evalue:8.6e-15 score:54.0 best_domain_score:53.7 name:Phage_holin_3_6;
tm_num 2;
56564 56968 transmembrane_helix
ID metaerg.pl|09013
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i56687-56779o56792-56860i;
56943 57254 CDS
ID metaerg.pl|09014
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693731.1 1 102 evalue:2.4e-40 qcov:99.00 identity:87.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF13997;
pfam_desc YqjK-like protein;
pfam_id YqjK;
pfam_target db:Pfam-A.hmm|PF13997.6 evalue:1.8e-09 score:36.9 best_domain_score:36.3 name:YqjK;
58473 57289 CDS
ID metaerg.pl|09015
allgo_ids GO:0071949; GO:0005829;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF56771.1 1 394 evalue:1.2e-204 qcov:100.00 identity:88.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00890; PF01494; PF12831; PF03486; PF13450; PF00070; PF07992; PF13738;
pfam_desc FAD binding domain; FAD binding domain; FAD dependent oxidoreductase; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id FAD_binding_2; FAD_binding_3; FAD_oxidored; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:2.8e-08 score:32.5 best_domain_score:31.9 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:1.6e-05 score:23.6 best_domain_score:20.6 name:FAD_binding_3; db:Pfam-A.hmm|PF12831.7 evalue:2.2e-07 score:29.8 best_domain_score:29.2 name:FAD_oxidored; db:Pfam-A.hmm|PF03486.14 evalue:6.5e-134 score:445.9 best_domain_score:445.7 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:2.1e-05 score:23.9 best_domain_score:23.9 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:2.6e-05 score:23.9 best_domain_score:13.3 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:3.5e-08 score:32.3 best_domain_score:17.9 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:4.7e-09 score:35.1 best_domain_score:17.7 name:Pyr_redox_3;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P37631|YHIN_ECOLI;
sprot_target db:uniprot_sprot|sp|P37631|YHIN_ECOLI 3 392 evalue:6.1e-99 qcov:99.00 identity:49.40;
tigrfam_acc TIGR00275;
tigrfam_desc flavoprotein, HI0933 family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00275;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00275 evalue:6.8e-116 score:386.5 best_domain_score:386.4 name:TIGR00275;
tm_num 1;
57289 57351 signal_peptide
ID metaerg.pl|09016
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
58473 57289 transmembrane_helix
ID metaerg.pl|09017
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i57301-57360o;
58608 59774 CDS
ID metaerg.pl|09018
allgo_ids GO:0016020; GO:0042597; GO:0055085;
allko_ids K03585;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ88320.1 29 388 evalue:3.7e-174 qcov:92.80 identity:89.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF13533; PF13437; PF16576;
pfam_desc Biotin-lipoyl like; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF13533.6 evalue:1.6e-08 score:33.5 best_domain_score:25.2 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:8.1e-14 score:51.5 best_domain_score:42.5 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:1.5e-29 score:102.0 best_domain_score:101.4 name:HlyD_D23;
sprot_desc Efflux pump periplasmic linker BepF;
sprot_id sp|Q8FWV8|BEPF_BRUSU;
sprot_target db:uniprot_sprot|sp|Q8FWV8|BEPF_BRUSU 34 367 evalue:7.8e-14 qcov:86.10 identity:26.00;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:1.3e-70 score:237.0 best_domain_score:236.7 name:TIGR01730;
59774 62896 CDS
ID metaerg.pl|09019
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886;
allko_ids K18138;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis_A;
genomedb_acc GCF_002211105.1;
genomedb_target db:genomedb|GCF_002211105.1|WP_088700404.1 1 1040 evalue:0.0e+00 qcov:100.00 identity:93.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00873; PF03176;
pfam_desc AcrB/AcrD/AcrF family; MMPL family;
pfam_id ACR_tran; MMPL;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:5.5e-293 score:973.7 best_domain_score:973.5 name:ACR_tran; db:Pfam-A.hmm|PF03176.15 evalue:2.6e-09 score:35.7 best_domain_score:23.9 name:MMPL;
sprot_desc Uncharacterized transporter HI_0895;
sprot_id sp|Q57124|Y895_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57124|Y895_HAEIN 1 1013 evalue:2.3e-153 qcov:97.40 identity:35.20;
tm_num 12;
59774 62896 transmembrane_helix
ID metaerg.pl|09020
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i59807-59860o60764-60832i60851-60919o60929-60997i61067-61135o61163-61231i61340-61408o62333-62392i62411-62479o62507-62575i62636-62695o62723-62791i;
63420 62992 CDS
ID metaerg.pl|09021
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035583991.1 1 142 evalue:1.9e-67 qcov:100.00 identity:93.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF12276;
pfam_desc Protein of unknown function (DUF3617);
pfam_id DUF3617;
pfam_target db:Pfam-A.hmm|PF12276.8 evalue:3.7e-13 score:49.2 best_domain_score:48.2 name:DUF3617;
sp YES;
62992 63051 signal_peptide
ID metaerg.pl|09022
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
63558 63767 CDS
ID metaerg.pl|09023
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693736.1 1 69 evalue:1.2e-30 qcov:100.00 identity:88.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF14255;
pfam_desc Cysteine-rich CPXCG;
pfam_id Cys_rich_CPXG;
pfam_target db:Pfam-A.hmm|PF14255.6 evalue:1.6e-13 score:49.6 best_domain_score:49.3 name:Cys_rich_CPXG;
64649 63795 CDS
ID metaerg.pl|09024
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K02011; K02053; K11074;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035563255.1 1 276 evalue:9.4e-135 qcov:97.20 identity:93.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.7e-14 score:53.2 best_domain_score:53.2 name:BPD_transp_1;
sprot_desc Putrescine transport system permease protein PotI;
sprot_id sp|P0AFL2|POTI_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AFL2|POTI_ECOL6 13 275 evalue:9.6e-94 qcov:92.60 identity:67.70;
tm_num 6;
64649 63795 transmembrane_helix
ID metaerg.pl|09025
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i63831-63899o63984-64052i64113-64181o64209-64277i64338-64406o64512-64580i;
65585 64677 CDS
ID metaerg.pl|09026
allgo_ids GO:0016020; GO:0055085; GO:0043190; GO:0005887; GO:0005886; GO:0015847;
allko_ids K11075; K11071; K02054;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035583997.1 1 302 evalue:8.1e-153 qcov:100.00 identity:93.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.6e-14 score:53.3 best_domain_score:53.3 name:BPD_transp_1;
sprot_desc Putrescine transport system permease protein PotH;
sprot_id sp|P31135|POTH_ECOLI;
sprot_target db:uniprot_sprot|sp|P31135|POTH_ECOLI 12 301 evalue:2.9e-96 qcov:96.00 identity:61.70;
tm_num 6;
65585 64677 transmembrane_helix
ID metaerg.pl|09027
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i64734-64793o64926-64994i65031-65099o65193-65261i65322-65390o65490-65558i;
66802 65621 CDS
ID metaerg.pl|09028
allec_ids 3.6.3.31;
allgo_ids GO:0005524; GO:0043190; GO:0016887; GO:0015417; GO:0015847;
allko_ids K10112; K01998; K10111; K10562; K02031; K02049; K02065; K01995; K11076; K02193; K02013; K10235; K05816; K06857; K11080; K10000; K02023; K02018; K09812; K10195; K10243; K01990; K11962; K02000; K10230; K10539; K02004; K02006; K02052; K02056; K02010; K09817; K05847; K01997; K02003; K02032; K02017; K11084; K10441; K10199; K02071; K06861; K01996; K02068; K11072; K02045; K02028; K10239; K02062;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008959595.1 1 393 evalue:9.4e-210 qcov:100.00 identity:93.40;
kegg_pathway_id 02010; 00910;
kegg_pathway_name ABC transporters - General; Nitrogen metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF13304; PF00005; PF08402;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; TOBE domain;
pfam_id AAA_21; ABC_tran; TOBE_2;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.5e-07 score:29.6 best_domain_score:17.3 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.9e-36 score:124.9 best_domain_score:124.2 name:ABC_tran; db:Pfam-A.hmm|PF08402.10 evalue:7.8e-17 score:60.5 best_domain_score:59.2 name:TOBE_2;
sprot_desc Putrescine transport ATP-binding protein PotG;
sprot_id sp|P31134|POTG_ECOLI;
sprot_target db:uniprot_sprot|sp|P31134|POTG_ECOLI 22 391 evalue:5.2e-122 qcov:94.10 identity:63.70;
tigrfam_acc TIGR01187;
tigrfam_desc polyamine ABC transporter, ATP-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name potA;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01187 evalue:6.7e-129 score:428.8 best_domain_score:428.6 name:TIGR01187;
68005 66902 CDS
ID metaerg.pl|09029
allgo_ids GO:0005576; GO:0042597; GO:0019808; GO:0015846;
allko_ids K11073;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693740.1 1 367 evalue:7.2e-196 qcov:100.00 identity:93.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF02030; PF01547; PF13531; PF13343; PF13416;
pfam_desc Hypothetical lipoprotein (MG045 family); Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id Lipoprotein_8; SBP_bac_1; SBP_bac_11; SBP_bac_6; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF02030.15 evalue:7e-07 score:27.5 best_domain_score:22.3 name:Lipoprotein_8; db:Pfam-A.hmm|PF01547.25 evalue:1.6e-17 score:63.7 best_domain_score:63.0 name:SBP_bac_1; db:Pfam-A.hmm|PF13531.6 evalue:7e-09 score:35.0 best_domain_score:34.0 name:SBP_bac_11; db:Pfam-A.hmm|PF13343.6 evalue:5.3e-23 score:80.9 best_domain_score:80.3 name:SBP_bac_6; db:Pfam-A.hmm|PF13416.6 evalue:4.8e-32 score:111.1 best_domain_score:110.9 name:SBP_bac_8;
sp YES;
sprot_desc Putrescine-binding periplasmic protein SpuD;
sprot_id sp|Q02UB7|SPUD_PSEAB;
sprot_target db:uniprot_sprot|sp|Q02UB7|SPUD_PSEAB 7 367 evalue:5.5e-110 qcov:98.40 identity:55.70;
66902 66976 signal_peptide
ID metaerg.pl|09030
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
68356 68919 CDS
ID metaerg.pl|09031
allec_ids 1.11.1.15;
allgo_ids GO:0051920; GO:0055114; GO:0005737; GO:0004601; GO:0045454; GO:0006979;
allko_ids K11065; K00430; K13279; K11188; K11185; K03386; K11186;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_008959597.1 1 187 evalue:3.3e-104 qcov:100.00 identity:99.50;
kegg_pathway_id 00360; 00940; 00680; 00480;
kegg_pathway_name Phenylalanine metabolism; Phenylpropanoid biosynthesis; Methane metabolism; Glutathione metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF10417; PF00578; PF08534;
pfam_desc C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; Redoxin;
pfam_id 1-cysPrx_C; AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF10417.9 evalue:4.9e-06 score:25.5 best_domain_score:24.8 name:1-cysPrx_C; db:Pfam-A.hmm|PF00578.21 evalue:3.5e-35 score:119.9 best_domain_score:119.5 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:9.1e-12 score:44.1 best_domain_score:43.8 name:Redoxin;
sprot_desc Alkyl hydroperoxide reductase C;
sprot_id sp|P0A252|AHPC_SALTI;
sprot_target db:uniprot_sprot|sp|P0A252|AHPC_SALTI 1 187 evalue:2.8e-78 qcov:100.00 identity:70.60;
tigrfam_acc TIGR03137;
tigrfam_desc peroxiredoxin;
tigrfam_mainrole Cellular processes;
tigrfam_name AhpC;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR03137 evalue:9.1e-104 score:344.2 best_domain_score:344.1 name:TIGR03137;
69156 70712 CDS
ID metaerg.pl|09032
allec_ids 1.8.1.-;
allgo_ids GO:0016491; GO:0055114; GO:0005623; GO:0008785; GO:0009055; GO:0050660; GO:0051287; GO:0015035; GO:0045454; GO:0000302;
allko_ids K00266; K00382; K00302; K00384; K03388; K00383; K03387;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233588.1 1 518 evalue:8.7e-288 qcov:100.00 identity:97.30;
kegg_pathway_id 00260; 00240; 00020; 00480; 00280; 00010; 00790; 00910; 00252; 00251; 00620;
kegg_pathway_name Glycine, serine and threonine metabolism; Pyrimidine metabolism; Citrate cycle (TCA cycle); Glutathione metabolism; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Folate biosynthesis; Nitrogen metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Pyruvate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00890; PF01134; PF00070; PF07992; PF13738; PF13192;
pfam_desc FAD binding domain; Glucose inhibited division protein A; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain;
pfam_id FAD_binding_2; GIDA; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Thioredoxin_3;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:2.6e-06 score:26.0 best_domain_score:11.7 name:FAD_binding_2; db:Pfam-A.hmm|PF01134.22 evalue:1.1e-08 score:33.8 best_domain_score:16.1 name:GIDA; db:Pfam-A.hmm|PF00070.27 evalue:5.4e-14 score:51.7 best_domain_score:51.3 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.6e-47 score:161.4 best_domain_score:160.8 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:1.4e-19 score:69.7 best_domain_score:58.7 name:Pyr_redox_3; db:Pfam-A.hmm|PF13192.6 evalue:8e-09 score:34.7 best_domain_score:29.9 name:Thioredoxin_3;
sprot_desc Alkyl hydroperoxide reductase subunit F;
sprot_id sp|Q9I6Z2|AHPF_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I6Z2|AHPF_PSEAE 1 517 evalue:1.3e-226 qcov:99.80 identity:75.60;
tigrfam_acc TIGR03140;
tigrfam_desc alkyl hydroperoxide reductase subunit F;
tigrfam_mainrole Cellular processes;
tigrfam_name AhpF;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR03140 evalue:7.1e-242 score:802.6 best_domain_score:802.4 name:TIGR03140;
72770 70854 CDS
ID metaerg.pl|09033
allec_ids 2.3.1.-;
allgo_ids GO:0042619; GO:0005737; GO:0016746;
allko_ids K03821;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064234469.1 1 636 evalue:0.0e+00 qcov:99.70 identity:91.40;
kegg_pathway_id 00650;
kegg_pathway_name Butanoate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id PWY-5080; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-6310; PWY-5139; KDO-NAGLIPASYN-PWY; PWY-4801; PWY-5184; BENZCOA-PWY; PWY-6312; PWY-6418; PWY-6442; PWY-6397; PWY1-3; PWY-6113; FASYN-INITIAL-PWY; PWYG-321; PWY-6413; PWY1A0-6325; PWY-6432; LPSSYN-PWY; PWY-5437; PWY-5981; PWY-5477; PWY-6318; PWY-5307; PWY-5972; PWY-5405; PWY-5393; PWY-6412; KDO-LIPASYN-PWY; PWY-5965; PWY-5209; PWY-5400; PWY-6404; CENTBENZCOA-PWY; PWY-6316; PWY-5313; PWY-5140; PWY-5268; PWY-6411; PWY-5987; PWY0-881; PWY-84; PWY-6438; THREOCAT-PWY; PWY-6515; P3-PWY; PWY-6295; ECASYN-PWY; PWY-5284;
metacyc_pathway_name very long chain fatty acid biosynthesis I;; sophorolipid biosynthesis;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; superpathway of (Kdo)2-lipid A biosynthesis;; aloesone biosynthesis I;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; barbaloin biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; ginsenoside degradation III;; actinorhodin biosynthesis;; curcuminoid biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; gallotannin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; gentiodelphin biosynthesis;; stearate biosynthesis I (animals and fungi);; superpathway of betalain biosynthesis;; raspberry ketone biosynthesis;; ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; amaranthin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; cannabinoid biosynthesis;; salvianin biosynthesis;; ginsenoside degradation I;; sorgoleone biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; resveratrol biosynthesis;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; phloridzin biosynthesis;; gallate degradation III (anaerobic);; ; enterobacterial common antigen biosynthesis;; shisonin biosynthesis;;
metacyc_pathway_type Fatty-acid-biosynthesis;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; POLYKETIDE-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; Cell-Wall-Biosynthesis;; Storage-Compounds-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; TERPENOID-DEG;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; GALLOTANNINS;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; Stearate-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; POLYKETIDE-SYN;; Ginsenoside-Degradation;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis;; METHANOGENESIS;; BETALAIN-ALKALOIDS;; Cell-Wall-Biosynthesis; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; TERPENOPHENOLICS-SYN;; ANTHOCYANIN-SYN;; Ginsenoside-Degradation;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; FLAVONOID-SYN;; GALLATE-DEG;; ; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;;
pfam_acc PF00561; PF07167;
pfam_desc alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus;
pfam_id Abhydrolase_1; PhaC_N;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:5e-13 score:48.5 best_domain_score:46.4 name:Abhydrolase_1; db:Pfam-A.hmm|PF07167.13 evalue:3.9e-73 score:244.0 best_domain_score:242.3 name:PhaC_N;
sprot_desc Poly(3-hydroxyalkanoate) polymerase subunit PhaC;
sprot_id sp|O66392|PHAC_AZOC5;
sprot_target db:uniprot_sprot|sp|O66392|PHAC_AZOC5 67 624 evalue:1.1e-132 qcov:87.50 identity:43.50;
tigrfam_acc TIGR01838;
tigrfam_desc poly(R)-hydroxyalkanoic acid synthase, class I;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name PHA_synth_I;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01838 evalue:2.1e-229 score:761.5 best_domain_score:761.3 name:TIGR01838;
73357 72947 CDS
ID metaerg.pl|09034
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_035584005.1 1 136 evalue:7.6e-58 qcov:100.00 identity:96.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF09361;
pfam_desc Phasin protein;
pfam_id Phasin_2;
pfam_target db:Pfam-A.hmm|PF09361.10 evalue:1e-18 score:66.7 best_domain_score:66.7 name:Phasin_2;
tigrfam_acc TIGR02809;
tigrfam_desc phasin family protein;
tigrfam_name phasin_3;
tigrfam_target db:TIGRFAMs.hmm|TIGR02809 evalue:3.7e-26 score:91.0 best_domain_score:90.7 name:TIGR02809;
73912 73496 CDS
ID metaerg.pl|09035
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035584007.1 1 138 evalue:2.0e-45 qcov:100.00 identity:76.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
75079 73988 CDS
ID metaerg.pl|09036
allec_ids 4.2.3.5;
allgo_ids GO:0004107; GO:0009073; GO:0009423;
allko_ids K01736;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ88333.1 1 363 evalue:1.4e-204 qcov:100.00 identity:97.20;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id ARO-PWY; PWY-6165; COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; PWY-6163;
metacyc_pathway_name chorismate biosynthesis I;; chorismate biosynthesis II (archaea);; superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; chorismate biosynthesis from 3-dehydroquinate;;
metacyc_pathway_type Chorismate-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; Chorismate-Biosynthesis;;
pfam_acc PF01264;
pfam_desc Chorismate synthase;
pfam_id Chorismate_synt;
pfam_target db:Pfam-A.hmm|PF01264.21 evalue:2.4e-142 score:472.7 best_domain_score:472.5 name:Chorismate_synt;
sprot_desc Chorismate synthase;
sprot_id sp|Q1QUP5|AROC_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QUP5|AROC_CHRSD 1 360 evalue:5.0e-180 qcov:99.20 identity:84.20;
tigrfam_acc TIGR00033;
tigrfam_desc chorismate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name aroC;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00033 evalue:1.1e-140 score:467.7 best_domain_score:467.5 name:TIGR00033;
76052 75093 CDS
ID metaerg.pl|09037
allec_ids 2.1.1.298; 2.1.1.-;
allgo_ids GO:0008168; GO:0005829; GO:0003676; GO:0036009; GO:0009007; GO:0018364;
allko_ids K02493; K07320;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035584011.1 1 319 evalue:3.1e-171 qcov:100.00 identity:93.10;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id CO2FORM-PWY; PWY-5116; PWY-1581; PWY-5773; PWY-6519; METHIONINE-DEG1-PWY; PWY-5328; PWY-6146; PWY-6427; PWY-6395; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6292; PWY-5987; PWY-5479; PWY-5209; PWY-5855; PWY-6151; PWY-6303; PWY-5857; METH-ACETATE-PWY; PWY-6142; PWY-6154; UBISYN-PWY; PWY-6424; PWY-5856; PWY-1061; PWY-5876; PWY-5864; PWY-5975; PWY-6113; PWY-5729; PWY-5305; PWYG-321; PWY-1422; PWY-6477; PWY-5467; PWY-6442; PWY-6575; CODH-PWY; PWY-4021; PWY-5041; PWY-6153; ALL-CHORISMATE-PWY; PWY-3542;
metacyc_pathway_name methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; xanthohumol biosynthesis;; biotin biosynthesis I;; superpathway of L-cysteine biosynthesis (mammalian);; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; S-adenosyl-L-methionine cycle I;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; methanogenesis from acetate;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ; ubiquinol-9 biosynthesis (prokaryotic);; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; vitamin E biosynthesis (tocopherols);; gibberellin inactivation II (methylation);; gramine biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; autoinducer AI-2 biosynthesis I;; superpathway of chorismate metabolism;; choline biosynthesis II;;
metacyc_pathway_type C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Gluconeogenesis; Super-Pathways;; Autoinducer-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; ; Ubiquinone-Biosynthesis;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Autotrophic-CO2-Fixation;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Autoinducer-Biosynthesis;; Super-Pathways;; Choline-Biosynthesis;;
pfam_acc PF03602; PF08241; PF09445; PF10294; PF13649; PF13847; PF05175; PF06325; PF01170;
pfam_desc Conserved hypothetical protein 95; Methyltransferase domain; RNA cap guanine-N2 methyltransferase; Lysine methyltransferase; Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain; Ribosomal protein L11 methyltransferase (PrmA); Putative RNA methylase family UPF0020;
pfam_id Cons_hypoth95; Methyltransf_11; Methyltransf_15; Methyltransf_16; Methyltransf_25; Methyltransf_31; MTS; PrmA; UPF0020;
pfam_target db:Pfam-A.hmm|PF03602.15 evalue:1.3e-06 score:27.4 best_domain_score:26.7 name:Cons_hypoth95; db:Pfam-A.hmm|PF08241.12 evalue:3.4e-05 score:23.6 best_domain_score:20.4 name:Methyltransf_11; db:Pfam-A.hmm|PF09445.10 evalue:2.5e-05 score:23.1 best_domain_score:22.4 name:Methyltransf_15; db:Pfam-A.hmm|PF10294.9 evalue:1.2e-05 score:24.4 best_domain_score:23.6 name:Methyltransf_16; db:Pfam-A.hmm|PF13649.6 evalue:3.3e-09 score:36.6 best_domain_score:32.2 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:5.1e-13 score:48.3 best_domain_score:47.9 name:Methyltransf_31; db:Pfam-A.hmm|PF05175.14 evalue:2.8e-19 score:68.5 best_domain_score:60.5 name:MTS; db:Pfam-A.hmm|PF06325.13 evalue:9.3e-08 score:31.0 best_domain_score:29.9 name:PrmA; db:Pfam-A.hmm|PF01170.18 evalue:1.4e-05 score:24.1 best_domain_score:21.6 name:UPF0020;
sprot_desc 50S ribosomal protein L3 glutamine methyltransferase;
sprot_id sp|Q9I347|PRMB_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I347|PRMB_PSEAE 23 318 evalue:1.5e-100 qcov:92.80 identity:61.80;
tigrfam_acc TIGR00536; TIGR03533; TIGR03534;
tigrfam_desc methyltransferase, HemK family; protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; protein-(glutamine-N5) methyltransferase, release factor-specific;
tigrfam_mainrole Protein fate; Protein synthesis; Protein fate;
tigrfam_name hemK_fam; L3_gln_methyl; RF_mod_PrmC;
tigrfam_sub1role Protein modification and repair; Ribosomal proteins synthesis and modification; Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00536 evalue:6.1e-75 score:251.1 best_domain_score:250.8 name:TIGR00536; db:TIGRFAMs.hmm|TIGR03533 evalue:2.4e-119 score:397.0 best_domain_score:396.8 name:TIGR03533; db:TIGRFAMs.hmm|TIGR03534 evalue:3.1e-59 score:199.6 best_domain_score:199.2 name:TIGR03534;
76214 76783 CDS
ID metaerg.pl|09038
allec_ids 3.1.-.-;
allgo_ids GO:0003677; GO:0004520;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis_A;
genomedb_acc GCF_002211105.1;
genomedb_target db:genomedb|GCF_002211105.1|WP_088700417.1 1 188 evalue:6.1e-98 qcov:99.50 identity:93.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01713;
pfam_desc Smr domain;
pfam_id Smr;
pfam_target db:Pfam-A.hmm|PF01713.21 evalue:1.7e-22 score:78.8 best_domain_score:77.7 name:Smr;
sprot_desc Probable DNA endonuclease SmrA;
sprot_id sp|P76053|SMRA_ECOLI;
sprot_target db:uniprot_sprot|sp|P76053|SMRA_ECOLI 9 186 evalue:7.7e-15 qcov:94.20 identity:32.40;
77799 76786 CDS
ID metaerg.pl|09039
allgo_ids GO:0006629; GO:0004622; GO:0016042; GO:0046470;
allko_ids K07001;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002332255;
genomedb_acc GCF_002332255.1;
genomedb_target db:genomedb|GCF_002332255.1|WP_096279040.1 1 337 evalue:3.7e-170 qcov:100.00 identity:90.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF01734;
pfam_desc Patatin-like phospholipase;
pfam_id Patatin;
pfam_target db:Pfam-A.hmm|PF01734.22 evalue:3.7e-17 score:62.4 best_domain_score:59.5 name:Patatin;
sprot_desc Uncharacterized NTE family protein MT1093;
sprot_id sp|P9WIY8|Y1063_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WIY8|Y1063_MYCTO 9 325 evalue:6.5e-57 qcov:94.10 identity:38.10;
78712 77810 CDS
ID metaerg.pl|09040
allec_ids 3.1.-.-;
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008959607.1 1 295 evalue:1.5e-138 qcov:98.30 identity:84.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:5.6e-22 score:77.8 best_domain_score:77.3 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:3.3e-16 score:59.8 best_domain_score:59.4 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:7.2e-12 score:44.3 best_domain_score:43.6 name:Hydrolase_4;
sprot_desc Serine hydrolase-like protein DDB_G0286239;
sprot_id sp|Q54M29|Y6239_DICDI;
sprot_target db:uniprot_sprot|sp|Q54M29|Y6239_DICDI 24 280 evalue:1.8e-26 qcov:85.70 identity:31.60;
81561 78985 CDS
ID metaerg.pl|09041
allgo_ids GO:0016021; GO:0005886;
allko_ids K02004;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ88338.1 1 858 evalue:0.0e+00 qcov:100.00 identity:90.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF12704;
pfam_desc MacB-like periplasmic core domain;
pfam_id MacB_PCD;
pfam_target db:Pfam-A.hmm|PF12704.7 evalue:8e-10 score:38.6 best_domain_score:27.5 name:MacB_PCD;
sprot_desc Uncharacterized ABC transporter permease YbbP;
sprot_id sp|P77504|YBBP_ECOLI;
sprot_target db:uniprot_sprot|sp|P77504|YBBP_ECOLI 15 836 evalue:2.9e-101 qcov:95.80 identity:33.10;
tm_num 10;
81561 78985 transmembrane_helix
ID metaerg.pl|09042
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i79045-79113o79750-79803i79906-79974o80017-80085i80146-80214o80242-80310i80404-80463o81169-81237i81337-81405o81433-81501i;
82337 81561 CDS
ID metaerg.pl|09043
allgo_ids GO:0005524; GO:0016887;
allko_ids K10000; K02023; K02018; K09812; K10243; K02000; K01998; K10112; K10111; K02031; K02049; K02065; K01995; K05816; K02071; K06861; K01996; K02045; K11072; K02068; K02028; K09810; K02004; K02006; K02052; K02010; K05847; K01997; K02003; K02032; K02017;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002366715;
genomedb_acc GCA_002366715.1;
genomedb_target db:genomedb|GCA_002366715.1|DFBS01000014.1_6 2 257 evalue:3.4e-123 qcov:99.20 identity:89.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.2e-31 score:109.3 best_domain_score:108.9 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YbbA;
sprot_id sp|P0A9T9|YBBA_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9T9|YBBA_ECO57 28 245 evalue:1.4e-62 qcov:84.50 identity:58.20;
82393 83103 CDS
ID metaerg.pl|09044
allec_ids 3.1.1.1;
allgo_ids GO:0016788; GO:0005576; GO:0004064; GO:0052689; GO:0004622; GO:0080030;
allko_ids K10804;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ88340.1 1 236 evalue:1.1e-104 qcov:100.00 identity:82.20;
kegg_pathway_id 01040;
kegg_pathway_name Biosynthesis of unsaturated fatty acids;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
metacyc_pathway_id PWY-6303;
metacyc_pathway_name methyl indole-3-acetate interconversion;;
metacyc_pathway_type Auxin-Biosynthesis; Interconversion;;
pfam_acc PF00657; PF13472;
pfam_desc GDSL-like Lipase/Acylhydrolase; GDSL-like Lipase/Acylhydrolase family;
pfam_id Lipase_GDSL; Lipase_GDSL_2;
pfam_target db:Pfam-A.hmm|PF00657.22 evalue:4.1e-09 score:35.9 best_domain_score:35.4 name:Lipase_GDSL; db:Pfam-A.hmm|PF13472.6 evalue:1.1e-23 score:83.8 best_domain_score:83.4 name:Lipase_GDSL_2;
sp YES;
sprot_desc Esterase TesA;
sprot_id sp|Q9HZY8|EST_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HZY8|EST_PSEAE 49 224 evalue:6.4e-51 qcov:74.60 identity:54.70;
tm_num 1;
82393 82494 signal_peptide
ID metaerg.pl|09045
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
82393 83103 transmembrane_helix
ID metaerg.pl|09046
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i82411-82479o;
83198 83902 CDS
ID metaerg.pl|09047
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693752.1 1 234 evalue:1.8e-115 qcov:100.00 identity:88.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF06035;
pfam_desc Bacterial transglutaminase-like cysteine proteinase BTLCP;
pfam_id Peptidase_C93;
pfam_target db:Pfam-A.hmm|PF06035.11 evalue:5.7e-15 score:54.7 best_domain_score:54.2 name:Peptidase_C93;
sp YES;
tigrfam_acc TIGR01409;
tigrfam_desc Tat (twin-arginine translocation) pathway signal sequence;
tigrfam_mainrole Protein fate;
tigrfam_name TAT_signal_seq;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01409 evalue:0.00037 score:19.9 best_domain_score:18.8 name:TIGR01409;
83198 83314 signal_peptide
ID metaerg.pl|09048
Note TAT;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
83917 85821 CDS
ID metaerg.pl|09049
allko_ids K07641; K07655; K07638; K02482; K01768; K07674;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693753.1 1 634 evalue:0.0e+00 qcov:100.00 identity:87.20;
kegg_pathway_id 02020; 00230;
kegg_pathway_name Two-component system - General; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00563; PF00990; PF16448;
pfam_desc EAL domain; Diguanylate cyclase, GGDEF domain; LapD/MoxY periplasmic domain;
pfam_id EAL; GGDEF; LapD_MoxY_N;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:1.5e-40 score:138.4 best_domain_score:136.7 name:EAL; db:Pfam-A.hmm|PF00990.21 evalue:3.8e-15 score:55.2 best_domain_score:54.4 name:GGDEF; db:Pfam-A.hmm|PF16448.5 evalue:3.1e-41 score:139.4 best_domain_score:137.9 name:LapD_MoxY_N;
tm_num 1;
83917 85821 transmembrane_helix
ID metaerg.pl|09050
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
topology i83935-84003o;
86191 85868 CDS
ID metaerg.pl|09051
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI65328.1 1 107 evalue:1.1e-46 qcov:100.00 identity:92.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
87424 86279 CDS
ID metaerg.pl|09052
allgo_ids GO:0005509;
allko_ids K01046;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002966495;
genomedb_acc GCF_002966495.1;
genomedb_target db:genomedb|GCF_002966495.1|WP_105208891.1 1 381 evalue:1.3e-155 qcov:100.00 identity:72.50;
kegg_pathway_id 00561;
kegg_pathway_name Glycerolipid metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.2386; ; 21.2319; 0.00333433; 0.00335724;
pfam_acc PF00353;
pfam_desc RTX calcium-binding nonapeptide repeat (4 copies);
pfam_id HemolysinCabind;
pfam_target db:Pfam-A.hmm|PF00353.19 evalue:2.9e-17 score:61.5 best_domain_score:40.2 name:HemolysinCabind;
tigrfam_acc TIGR03661;
tigrfam_desc type I secretion C-terminal target domain (VC_A0849 subclass);
tigrfam_mainrole Cellular processes;
tigrfam_name T1SS_VCA0849;
tigrfam_sub1role Pathogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR03661 evalue:6.3e-13 score:48.9 best_domain_score:48.4 name:TIGR03661;
>Feature NODE_63_length_86995_cov_36.995
26 117 tRNA
ID metaerg.pl|09053
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
name tRNA_Ser_gga;
194 283 tRNA
ID metaerg.pl|09054
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
name tRNA_Ser_tga;
1020 316 CDS
ID metaerg.pl|09055
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725727.1 14 232 evalue:8.8e-30 qcov:93.60 identity:37.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
tm_num 1;
1020 316 transmembrane_helix
ID metaerg.pl|09056
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i352-420o;
1093 2346 CDS
ID metaerg.pl|09057
allec_ids 1.1.1.42;
allgo_ids GO:0016616; GO:0055114; GO:0004450; GO:0000287; GO:0051287; GO:0006097; GO:0006099;
allko_ids K00031; K10978;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725726.1 1 417 evalue:7.3e-229 qcov:100.00 identity:93.00;
kegg_pathway_id 00020; 00720; 00480;
kegg_pathway_name Citrate cycle (TCA cycle); Reductive carboxylate cycle (CO2 fixation); Glutathione metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
metacyc_pathway_id REDCITCYC; TCA; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5913; P105-PWY; PWY-6549; TCA-GLYOX-BYPASS; ANARESP1-PWY; FERMENTATION-PWY;
metacyc_pathway_name TCA cycle VIII (Helicobacter);; TCA cycle I (prokaryotic);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; partial TCA cycle (obligate autotrophs);; TCA cycle IV (2-oxoglutarate decarboxylase);; L-glutamine biosynthesis III;; superpathway of glyoxylate bypass and TCA;; ; mixed acid fermentation;;
metacyc_pathway_type TCA-VARIANTS;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; TCA-VARIANTS;; TCA-VARIANTS;; GLUTAMINE-SYN;; Super-Pathways; TCA-VARIANTS;; ; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;;
pfam_acc PF00180;
pfam_desc Isocitrate/isopropylmalate dehydrogenase;
pfam_id Iso_dh;
pfam_target db:Pfam-A.hmm|PF00180.20 evalue:1.4e-103 score:345.9 best_domain_score:345.1 name:Iso_dh;
sprot_desc Isocitrate dehydrogenase [NADP];
sprot_id sp|O29610|IDH_ARCFU;
sprot_target db:uniprot_sprot|sp|O29610|IDH_ARCFU 1 416 evalue:3.9e-144 qcov:99.80 identity:59.60;
tigrfam_acc TIGR00183;
tigrfam_desc isocitrate dehydrogenase, NADP-dependent;
tigrfam_mainrole Energy metabolism;
tigrfam_name prok_nadp_idh;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR00183 evalue:2.7e-192 score:638.3 best_domain_score:638.1 name:TIGR00183;
2315 3148 CDS
ID metaerg.pl|09058
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169599.1 2 275 evalue:9.2e-111 qcov:98.90 identity:71.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF04305;
pfam_desc Protein of unknown function (DUF455);
pfam_id DUF455;
pfam_target db:Pfam-A.hmm|PF04305.14 evalue:5e-96 score:320.3 best_domain_score:320.0 name:DUF455;
sprot_desc hypothetical protein;
sprot_id sp|P43935|Y077_HAEIN;
sprot_target db:uniprot_sprot|sp|P43935|Y077_HAEIN 16 269 evalue:5.7e-51 qcov:91.70 identity:43.80;
3179 3952 CDS
ID metaerg.pl|09059
allec_ids 3.5.1.3;
allgo_ids GO:0006807; GO:0106008; GO:0050152;
allko_ids K03820; K13566;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725724.1 2 256 evalue:8.3e-90 qcov:99.20 identity:63.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00795;
pfam_desc Carbon-nitrogen hydrolase;
pfam_id CN_hydrolase;
pfam_target db:Pfam-A.hmm|PF00795.22 evalue:2.5e-26 score:91.8 best_domain_score:91.7 name:CN_hydrolase;
sprot_desc Omega-amidase YafV;
sprot_id sp|Q47679|YAFV_ECOLI;
sprot_target db:uniprot_sprot|sp|Q47679|YAFV_ECOLI 5 256 evalue:4.2e-56 qcov:98.10 identity:45.80;
4577 3957 CDS
ID metaerg.pl|09060
allec_ids 3.4.21.88;
allgo_ids GO:0004252; GO:0006508; GO:0003677; GO:0006281; GO:0006260; GO:0045892; GO:0009432;
allko_ids K01356;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725723.1 1 203 evalue:2.3e-74 qcov:98.50 identity:68.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF01726; PF00717;
pfam_desc LexA DNA binding domain; Peptidase S24-like;
pfam_id LexA_DNA_bind; Peptidase_S24;
pfam_target db:Pfam-A.hmm|PF01726.16 evalue:5.7e-23 score:79.7 best_domain_score:79.0 name:LexA_DNA_bind; db:Pfam-A.hmm|PF00717.23 evalue:4.1e-17 score:61.1 best_domain_score:60.6 name:Peptidase_S24;
sprot_desc LexA repressor;
sprot_id sp|Q2L247|LEXA_BORA1;
sprot_target db:uniprot_sprot|sp|Q2L247|LEXA_BORA1 2 200 evalue:4.0e-57 qcov:96.60 identity:56.60;
tigrfam_acc TIGR00498;
tigrfam_desc repressor LexA;
tigrfam_mainrole Regulatory functions;
tigrfam_name lexA;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00498 evalue:4.5e-60 score:201.9 best_domain_score:201.6 name:TIGR00498;
5180 4617 CDS
ID metaerg.pl|09061
allgo_ids GO:0019867;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL39143.1 6 167 evalue:1.0e-41 qcov:86.60 identity:49.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF03843;
pfam_desc Outer membrane lipoprotein Slp family;
pfam_id Slp;
pfam_target db:Pfam-A.hmm|PF03843.13 evalue:1e-41 score:141.1 best_domain_score:140.8 name:Slp;
sp YES;
tm_num 1;
4617 4682 lipoprotein_signal_peptide
ID metaerg.pl|09062
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
5180 4617 transmembrane_helix
ID metaerg.pl|09063
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i4635-4703o;
7253 5229 CDS
ID metaerg.pl|09064
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725722.1 10 659 evalue:5.0e-219 qcov:96.40 identity:60.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF11992; PF13559; PF01841;
pfam_desc Domain of unknown function (DUF3488); Domain of unknown function (DUF4129); Transglutaminase-like superfamily;
pfam_id DUF3488; DUF4129; Transglut_core;
pfam_target db:Pfam-A.hmm|PF11992.8 evalue:2.9e-91 score:305.0 best_domain_score:304.3 name:DUF3488; db:Pfam-A.hmm|PF13559.6 evalue:1.9e-08 score:33.7 best_domain_score:29.0 name:DUF4129; db:Pfam-A.hmm|PF01841.19 evalue:3.3e-26 score:91.2 best_domain_score:90.4 name:Transglut_core;
tm_num 6;
7253 5229 transmembrane_helix
ID metaerg.pl|09065
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i5265-5366o5409-5477i5553-5606o5619-5678i5742-5810o6885-6953i;
8206 7253 CDS
ID metaerg.pl|09066
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725721.1 15 317 evalue:1.7e-116 qcov:95.60 identity:67.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF01882;
pfam_desc Protein of unknown function DUF58;
pfam_id DUF58;
pfam_target db:Pfam-A.hmm|PF01882.18 evalue:9.3e-16 score:57.1 best_domain_score:56.6 name:DUF58;
tm_num 2;
8206 7253 transmembrane_helix
ID metaerg.pl|09067
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i7373-7429o7442-7510i;
9194 8244 CDS
ID metaerg.pl|09068
allgo_ids GO:0005524; GO:0016887;
allko_ids K03924;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725720.1 16 316 evalue:8.8e-126 qcov:95.30 identity:76.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF07726; PF07728; PF17863;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); AAA lid domain;
pfam_id AAA_3; AAA_5; AAA_lid_2;
pfam_target db:Pfam-A.hmm|PF07726.11 evalue:5.8e-61 score:203.3 best_domain_score:202.8 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:1.2e-12 score:47.3 best_domain_score:45.5 name:AAA_5; db:Pfam-A.hmm|PF17863.1 evalue:1.4e-15 score:56.1 best_domain_score:56.1 name:AAA_lid_2;
sprot_desc hypothetical protein;
sprot_id sp|P94474|YEAC_BACSU;
sprot_target db:uniprot_sprot|sp|P94474|YEAC_BACSU 24 316 evalue:9.1e-69 qcov:92.70 identity:43.20;
9537 9187 CDS
ID metaerg.pl|09069
allec_ids 4.2.1.96;
allgo_ids GO:0006729; GO:0008124;
allko_ids K01724;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725719.1 9 116 evalue:3.4e-51 qcov:93.10 identity:83.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
metacyc_pathway_id PHENYLALANINE-DEG1-PWY;
metacyc_pathway_name L-phenylalanine degradation I (aerobic);;
metacyc_pathway_type PHENYLALANINE-DEG;;
pfam_acc PF01329;
pfam_desc Pterin 4 alpha carbinolamine dehydratase;
pfam_id Pterin_4a;
pfam_target db:Pfam-A.hmm|PF01329.19 evalue:2.4e-26 score:90.9 best_domain_score:90.7 name:Pterin_4a;
sprot_desc Putative pterin-4-alpha-carbinolamine dehydratase;
sprot_id sp|Q5X3Q4|PHS_LEGPA;
sprot_target db:uniprot_sprot|sp|Q5X3Q4|PHS_LEGPA 9 114 evalue:2.8e-31 qcov:91.40 identity:57.00;
10340 9540 CDS
ID metaerg.pl|09070
allec_ids 1.14.16.1;
allgo_ids GO:0016714; GO:0055114; GO:0005506; GO:0004505; GO:0006559;
allko_ids K03393; K00500;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725718.1 1 266 evalue:5.9e-131 qcov:100.00 identity:85.30;
kegg_pathway_id 00400; 00380;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Tryptophan metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
metacyc_pathway_id PWY-6134; PHENYLALANINE-DEG1-PWY;
metacyc_pathway_name L-tyrosine biosynthesis IV;; L-phenylalanine degradation I (aerobic);;
metacyc_pathway_type TYROSINE-SYN;; PHENYLALANINE-DEG;;
pfam_acc PF00351;
pfam_desc Biopterin-dependent aromatic amino acid hydroxylase;
pfam_id Biopterin_H;
pfam_target db:Pfam-A.hmm|PF00351.21 evalue:4.8e-49 score:166.4 best_domain_score:166.1 name:Biopterin_H;
sprot_desc Phenylalanine-4-hydroxylase;
sprot_id sp|P43334|PH4H_PSEAE;
sprot_target db:uniprot_sprot|sp|P43334|PH4H_PSEAE 3 262 evalue:3.3e-88 qcov:97.70 identity:58.50;
tigrfam_acc TIGR01267;
tigrfam_desc phenylalanine-4-hydroxylase;
tigrfam_mainrole Energy metabolism;
tigrfam_name Phe4hydrox_mono;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01267 evalue:5.9e-97 score:322.9 best_domain_score:322.7 name:TIGR01267;
10398 11702 CDS
ID metaerg.pl|09071
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725717.1 6 431 evalue:6.8e-153 qcov:98.20 identity:62.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF01266; PF00890; PF13738;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id DAO; FAD_binding_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:2.5e-53 score:181.2 best_domain_score:180.9 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:4.7e-07 score:28.5 best_domain_score:27.1 name:FAD_binding_2; db:Pfam-A.hmm|PF13738.6 evalue:1.7e-08 score:33.3 best_domain_score:16.7 name:Pyr_redox_3;
12031 12915 CDS
ID metaerg.pl|09072
allec_ids 4.1.3.30;
allgo_ids GO:0004451; GO:0019752; GO:0000287; GO:0046421; GO:0016833; GO:0006113; GO:0019629;
allko_ids K03417;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727039.1 5 292 evalue:5.9e-132 qcov:98.00 identity:85.10;
kegg_pathway_id 00640;
kegg_pathway_name Propanoate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
metacyc_pathway_id PWY-5747; PWY0-42;
metacyc_pathway_name 2-methylcitrate cycle II;; 2-methylcitrate cycle I;;
metacyc_pathway_type Methyl-Citrate-Cycle;; Methyl-Citrate-Cycle;;
pfam_acc PF00463; PF13714;
pfam_desc Isocitrate lyase family; Phosphoenolpyruvate phosphomutase;
pfam_id ICL; PEP_mutase;
pfam_target db:Pfam-A.hmm|PF00463.21 evalue:6.4e-11 score:40.7 best_domain_score:40.3 name:ICL; db:Pfam-A.hmm|PF13714.6 evalue:2.5e-49 score:167.1 best_domain_score:166.9 name:PEP_mutase;
sprot_desc 2-methylisocitrate lyase;
sprot_id sp|Q8EJW1|PRPB_SHEON;
sprot_target db:uniprot_sprot|sp|Q8EJW1|PRPB_SHEON 4 293 evalue:2.4e-103 qcov:98.60 identity:64.10;
tigrfam_acc TIGR02317;
tigrfam_desc methylisocitrate lyase;
tigrfam_name prpB;
tigrfam_target db:TIGRFAMs.hmm|TIGR02317 evalue:2.6e-129 score:429.6 best_domain_score:429.4 name:TIGR02317;
12912 14033 CDS
ID metaerg.pl|09073
allec_ids 2.3.3.5;
allgo_ids GO:0046912; GO:0005759; GO:0050440; GO:0004108; GO:0036440; GO:0016833; GO:0005975; GO:0006113; GO:0019679; GO:0006099;
allko_ids K01659;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725716.1 1 373 evalue:8.1e-195 qcov:100.00 identity:89.30;
kegg_pathway_id 00640;
kegg_pathway_name Propanoate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
metacyc_pathway_id PWY0-42; PWY-5747;
metacyc_pathway_name 2-methylcitrate cycle I;; 2-methylcitrate cycle II;;
metacyc_pathway_type Methyl-Citrate-Cycle;; Methyl-Citrate-Cycle;;
pfam_acc PF00285;
pfam_desc Citrate synthase, C-terminal domain;
pfam_id Citrate_synt;
pfam_target db:Pfam-A.hmm|PF00285.21 evalue:1e-116 score:389.2 best_domain_score:389.0 name:Citrate_synt;
sprot_desc 2-methylcitrate synthase;
sprot_id sp|Q8EJW2|PRPC_SHEON;
sprot_target db:uniprot_sprot|sp|Q8EJW2|PRPC_SHEON 4 373 evalue:4.4e-155 qcov:99.20 identity:71.90;
tigrfam_acc TIGR01800;
tigrfam_desc 2-methylcitrate synthase/citrate synthase II;
tigrfam_name cit_synth_II;
tigrfam_target db:TIGRFAMs.hmm|TIGR01800 evalue:9.3e-154 score:510.8 best_domain_score:510.6 name:TIGR01800;
14713 14138 CDS
ID metaerg.pl|09074
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169598.1 2 191 evalue:9.9e-88 qcov:99.50 identity:81.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF04367;
pfam_desc Protein of unknown function (DUF502);
pfam_id DUF502;
pfam_target db:Pfam-A.hmm|PF04367.13 evalue:2.1e-29 score:100.7 best_domain_score:99.9 name:DUF502;
tm_num 2;
14713 14138 transmembrane_helix
ID metaerg.pl|09075
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i14156-14224o14282-14350i;
14942 14733 CDS
ID metaerg.pl|09076
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
sp YES;
tm_num 1;
14733 14798 signal_peptide
ID metaerg.pl|09077
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
14942 14733 transmembrane_helix
ID metaerg.pl|09078
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology o14742-14801i;
16035 14965 CDS
ID metaerg.pl|09079
allgo_ids GO:0016788;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725708.1 1 356 evalue:3.3e-145 qcov:100.00 identity:69.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF04952;
pfam_desc Succinylglutamate desuccinylase / Aspartoacylase family;
pfam_id AstE_AspA;
pfam_target db:Pfam-A.hmm|PF04952.14 evalue:6.1e-13 score:47.7 best_domain_score:47.1 name:AstE_AspA;
16190 17110 CDS
ID metaerg.pl|09080
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015562; GO:0006855;
allko_ids K02045; K01996; K06861; K02017; K05847; K02052; K02006; K01990; K02023; K09687; K05816; K02049; K01995; K01998; K10111;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725707.1 1 306 evalue:1.8e-136 qcov:100.00 identity:80.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:5.7e-11 score:42.0 best_domain_score:28.4 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:4.5e-29 score:100.9 best_domain_score:100.1 name:ABC_tran;
sprot_desc Probable multidrug ABC transporter ATP-binding protein YbhF;
sprot_id sp|P0A9U1|YBHF_ECOLI;
sprot_target db:uniprot_sprot|sp|P0A9U1|YBHF_ECOLI 1 222 evalue:1.1e-42 qcov:72.50 identity:39.00;
17110 17844 CDS
ID metaerg.pl|09081
allgo_ids GO:0055085;
allko_ids K01992;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725706.1 1 244 evalue:1.1e-110 qcov:100.00 identity:84.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF12679; PF12730;
pfam_desc ABC-2 family transporter protein; ABC-2 family transporter protein;
pfam_id ABC2_membrane_2; ABC2_membrane_4;
pfam_target db:Pfam-A.hmm|PF12679.7 evalue:6.4e-10 score:38.0 best_domain_score:38.0 name:ABC2_membrane_2; db:Pfam-A.hmm|PF12730.7 evalue:6.6e-07 score:28.7 best_domain_score:28.7 name:ABC2_membrane_4;
tm_num 7;
17110 17844 transmembrane_helix
ID metaerg.pl|09082
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i17167-17235o17263-17331i17392-17460o17503-17571i17590-17658o17686-17754i17767-17823o;
17885 19696 CDS
ID metaerg.pl|09083
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169596.1 1 601 evalue:4.6e-224 qcov:99.70 identity:66.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF09822;
pfam_desc ABC-type uncharacterized transport system;
pfam_id ABC_transp_aux;
pfam_target db:Pfam-A.hmm|PF09822.9 evalue:3.7e-65 score:219.3 best_domain_score:218.0 name:ABC_transp_aux;
sp YES;
tm_num 1;
17885 17941 signal_peptide
ID metaerg.pl|09084
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
17885 19696 transmembrane_helix
ID metaerg.pl|09085
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology o19589-19648i;
19693 20724 CDS
ID metaerg.pl|09086
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169594.1 1 339 evalue:1.3e-93 qcov:98.80 identity:54.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF14238;
pfam_desc Domain of unknown function (DUF4340);
pfam_id DUF4340;
pfam_target db:Pfam-A.hmm|PF14238.6 evalue:3.1e-11 score:42.9 best_domain_score:42.3 name:DUF4340;
sp YES;
tm_num 1;
19693 19764 signal_peptide
ID metaerg.pl|09087
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
19693 20724 transmembrane_helix
ID metaerg.pl|09088
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i19705-19764o;
21659 20757 CDS
ID metaerg.pl|09089
allgo_ids GO:0003700; GO:0006355; GO:0003677;
allko_ids K02041; K04761;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725703.1 1 300 evalue:2.2e-134 qcov:100.00 identity:82.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:1.5e-19 score:69.0 best_domain_score:67.7 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:5.6e-55 score:185.2 best_domain_score:184.5 name:LysR_substrate;
sprot_desc Hydrogen peroxide-inducible genes activator;
sprot_id sp|P0ACQ6|OXYR_ECO57;
sprot_target db:uniprot_sprot|sp|P0ACQ6|OXYR_ECO57 1 290 evalue:3.5e-70 qcov:96.70 identity:48.60;
21881 22420 CDS
ID metaerg.pl|09090
allec_ids 1.11.1.15;
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005737; GO:0004601; GO:0051920; GO:0045454;
allko_ids K11185; K03386; K11186; K13279; K00430; K11065; K11188;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725702.1 1 179 evalue:1.5e-90 qcov:100.00 identity:88.30;
kegg_pathway_id 00680; 00940; 00360; 00480;
kegg_pathway_name Methane metabolism; Phenylpropanoid biosynthesis; Phenylalanine metabolism; Glutathione metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:3.8e-34 score:116.5 best_domain_score:116.2 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:9.4e-17 score:60.3 best_domain_score:60.1 name:Redoxin;
sprot_desc Alkyl hydroperoxide reductase C;
sprot_id sp|A0R1V9|AHPC_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R1V9|AHPC_MYCS2 1 178 evalue:4.7e-54 qcov:99.40 identity:53.20;
22523 23077 CDS
ID metaerg.pl|09091
allec_ids 1.11.1.15;
allgo_ids GO:0051920; GO:0055114; GO:0008785; GO:0032843; GO:0004601; GO:0006979;
allko_ids K04756;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725701.1 1 184 evalue:9.9e-69 qcov:100.00 identity:72.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF02627;
pfam_desc Carboxymuconolactone decarboxylase family;
pfam_id CMD;
pfam_target db:Pfam-A.hmm|PF02627.20 evalue:2e-15 score:55.8 best_domain_score:54.7 name:CMD;
sprot_desc Alkyl hydroperoxide reductase AhpD;
sprot_id sp|B6IQZ3|AHPD_RHOCS;
sprot_target db:uniprot_sprot|sp|B6IQZ3|AHPD_RHOCS 1 179 evalue:2.5e-50 qcov:97.30 identity:54.70;
tigrfam_acc TIGR00777; TIGR00778;
tigrfam_desc alkylhydroperoxidase, AhpD family; alkylhydroperoxidase AhpD family core domain;
tigrfam_mainrole Cellular processes; Unknown function;
tigrfam_name ahpD; ahpD_dom;
tigrfam_sub1role Detoxification; General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00777 evalue:6.8e-62 score:207.5 best_domain_score:207.4 name:TIGR00777; db:TIGRFAMs.hmm|TIGR00778 evalue:1.2e-16 score:59.0 best_domain_score:57.6 name:TIGR00778;
23185 23574 CDS
ID metaerg.pl|09092
allgo_ids GO:0016790;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725700.1 1 124 evalue:1.1e-47 qcov:96.10 identity:79.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF03061;
pfam_desc Thioesterase superfamily;
pfam_id 4HBT;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:1.1e-18 score:66.6 best_domain_score:66.2 name:4HBT;
sprot_desc hypothetical protein;
sprot_id sp|P0A0Q8|VDLD_HELPJ;
sprot_target db:uniprot_sprot|sp|P0A0Q8|VDLD_HELPJ 9 119 evalue:6.6e-10 qcov:86.00 identity:31.50;
23621 24979 CDS
ID metaerg.pl|09093
allko_ids K07648; K07646; K07647; K10715;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylococcus;s__Methylococcus capsulatus;
genomedb_acc GCF_000424685.1;
genomedb_target db:genomedb|GCF_000424685.1|WP_017364288.1 16 445 evalue:8.6e-90 qcov:95.10 identity:40.80;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF03924; PF00990;
pfam_desc CHASE domain; Diguanylate cyclase, GGDEF domain;
pfam_id CHASE; GGDEF;
pfam_target db:Pfam-A.hmm|PF03924.13 evalue:2e-15 score:56.5 best_domain_score:55.2 name:CHASE; db:Pfam-A.hmm|PF00990.21 evalue:5.1e-44 score:149.1 best_domain_score:148.6 name:GGDEF;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:6.5e-39 score:132.5 best_domain_score:132.0 name:TIGR00254;
tm_num 2;
23621 24979 transmembrane_helix
ID metaerg.pl|09094
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i23657-23713o24392-24460i;
26472 24988 CDS
ID metaerg.pl|09095
allgo_ids GO:0015558; GO:1902604; GO:0016021; GO:0005886; GO:0015297;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Arsukibacterium;s__Arsukibacterium sp002415085;
genomedb_acc GCA_002415085.1;
genomedb_target db:genomedb|GCA_002415085.1|DIBV01000006.1_482 14 494 evalue:5.1e-136 qcov:97.40 identity:54.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF03806; PF03606; PF02667;
pfam_desc AbgT putative transporter family; C4-dicarboxylate anaerobic carrier; Short chain fatty acid transporter;
pfam_id ABG_transport; DcuC; SCFA_trans;
pfam_target db:Pfam-A.hmm|PF03806.13 evalue:9.1e-06 score:23.4 best_domain_score:21.1 name:ABG_transport; db:Pfam-A.hmm|PF03606.15 evalue:2.7e-122 score:407.8 best_domain_score:407.6 name:DcuC; db:Pfam-A.hmm|PF02667.14 evalue:5e-08 score:31.6 best_domain_score:30.7 name:SCFA_trans;
sp YES;
sprot_desc Putative basic amino acid antiporter YfcC;
sprot_id sp|P39263|YFCC_ECOLI;
sprot_target db:uniprot_sprot|sp|P39263|YFCC_ECOLI 1 493 evalue:2.0e-123 qcov:99.80 identity:48.00;
tm_num 13;
24988 25101 signal_peptide
ID metaerg.pl|09096
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
26472 24988 transmembrane_helix
ID metaerg.pl|09097
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i25036-25104o25258-25326i25387-25455o25465-25533i25552-25611o25639-25698i25813-25866o25876-25944i26002-26070o26098-26166i26179-26247o26290-26358i26392-26460o;
28145 26472 CDS
ID metaerg.pl|09098
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005737; GO:0003677; GO:0042802; GO:0008470; GO:0043565; GO:0006974; GO:0045892;
allko_ids K00253; K00248; K00249; K09456;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725699.1 11 550 evalue:6.4e-220 qcov:96.90 identity:69.30;
kegg_pathway_id 00071; 00410; 00650; 00640; 00280;
kegg_pathway_name Fatty acid metabolism; beta-Alanine metabolism; Butanoate metabolism; Propanoate metabolism; Valine, leucine and isoleucine degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
metacyc_pathway_id CARNMET-PWY; PWY-2582; PWY-6544; PWY-699;
metacyc_pathway_name L-carnitine degradation I;; brassinosteroid biosynthesis II;; superpathway of C28 brassinosteroid biosynthesis;; brassinosteroid biosynthesis I;;
metacyc_pathway_type CARN-DEG;; Brassinosteroid-Biosynthesis;; Super-Pathways;; Brassinosteroid-Biosynthesis;;
pfam_acc PF00441; PF08028; PF02770; PF18158;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Adaptive response protein AidB N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; AidB_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:2.2e-32 score:111.6 best_domain_score:110.7 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:4.8e-09 score:35.8 best_domain_score:35.7 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:6.7e-13 score:47.9 best_domain_score:47.0 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF18158.1 evalue:1.6e-60 score:202.8 best_domain_score:201.6 name:AidB_N;
sprot_desc Putative acyl-CoA dehydrogenase AidB;
sprot_id sp|P33224|AIDB_ECOLI;
sprot_target db:uniprot_sprot|sp|P33224|AIDB_ECOLI 9 530 evalue:4.3e-114 qcov:93.70 identity:44.10;
28572 28198 CDS
ID metaerg.pl|09099
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725698.1 1 123 evalue:1.9e-39 qcov:99.20 identity:66.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF04430;
pfam_desc Protein of unknown function (DUF498/DUF598);
pfam_id DUF498;
pfam_target db:Pfam-A.hmm|PF04430.14 evalue:7.9e-24 score:83.1 best_domain_score:82.9 name:DUF498;
28877 28584 CDS
ID metaerg.pl|09100
allgo_ids GO:0003723;
allko_ids K07574;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725697.1 1 96 evalue:3.3e-39 qcov:99.00 identity:86.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF01985;
pfam_desc CRS1 / YhbY (CRM) domain;
pfam_id CRS1_YhbY;
pfam_target db:Pfam-A.hmm|PF01985.21 evalue:6.7e-19 score:67.1 best_domain_score:66.9 name:CRS1_YhbY;
sprot_desc RNA-binding protein YhbY;
sprot_id sp|P0AGK6|YHBY_ECO57;
sprot_target db:uniprot_sprot|sp|P0AGK6|YHBY_ECO57 1 97 evalue:2.1e-16 qcov:100.00 identity:50.00;
tigrfam_acc TIGR00253;
tigrfam_desc putative RNA-binding protein, YhbY family;
tigrfam_mainrole Unknown function;
tigrfam_name RNA_bind_YhbY;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00253 evalue:2e-24 score:85.1 best_domain_score:85.0 name:TIGR00253;
28968 29573 CDS
ID metaerg.pl|09101
allec_ids 2.1.1.166;
allgo_ids GO:0008168; GO:0032259; GO:0005737; GO:0008650;
allko_ids K02427;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725696.1 1 198 evalue:4.4e-78 qcov:98.50 identity:74.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF01728;
pfam_desc FtsJ-like methyltransferase;
pfam_id FtsJ;
pfam_target db:Pfam-A.hmm|PF01728.19 evalue:1.6e-55 score:187.2 best_domain_score:187.0 name:FtsJ;
sprot_desc Ribosomal RNA large subunit methyltransferase E;
sprot_id sp|Q1H387|RLME_METFK;
sprot_target db:uniprot_sprot|sp|Q1H387|RLME_METFK 2 196 evalue:3.4e-61 qcov:97.00 identity:61.50;
29655 31580 CDS
ID metaerg.pl|09102
allec_ids 3.4.24.-;
allgo_ids GO:0005524; GO:0016021; GO:0005886; GO:0016887; GO:0004222; GO:0008270; GO:0030163;
allko_ids K02341; K01509; K07767; K13254; K00733; K02340; K02343; K03798;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725695.1 1 641 evalue:5.9e-294 qcov:100.00 identity:81.40;
kegg_pathway_id 00230; 03030; 01030;
kegg_pathway_name Purine metabolism; DNA replication; Glycan structures - biosynthesis 1;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00004; PF07728; PF17862; PF06480; PF01434;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); AAA+ lid domain; FtsH Extracellular; Peptidase family M41;
pfam_id AAA; AAA_5; AAA_lid_3; FtsH_ext; Peptidase_M41;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1.9e-46 score:157.0 best_domain_score:153.7 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:7e-06 score:25.3 best_domain_score:22.5 name:AAA_5; db:Pfam-A.hmm|PF17862.1 evalue:9.2e-15 score:53.4 best_domain_score:51.8 name:AAA_lid_3; db:Pfam-A.hmm|PF06480.15 evalue:1.1e-12 score:47.4 best_domain_score:45.0 name:FtsH_ext; db:Pfam-A.hmm|PF01434.18 evalue:2.4e-75 score:251.8 best_domain_score:251.2 name:Peptidase_M41;
sprot_desc ATP-dependent zinc metalloprotease FtsH;
sprot_id sp|P63344|FTSH_SALTI;
sprot_target db:uniprot_sprot|sp|P63344|FTSH_SALTI 5 614 evalue:2.1e-226 qcov:95.20 identity:65.20;
tigrfam_acc TIGR01241;
tigrfam_desc ATP-dependent metallopeptidase HflB;
tigrfam_mainrole Protein fate;
tigrfam_name FtsH_fam;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01241 evalue:3.4e-242 score:803.7 best_domain_score:803.3 name:TIGR01241;
tm_num 2;
29655 31580 transmembrane_helix
ID metaerg.pl|09103
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology o29664-29732i29967-30035o;
31650 32495 CDS
ID metaerg.pl|09104
allec_ids 2.5.1.15;
allgo_ids GO:0042558; GO:0004156; GO:0046872; GO:0046656; GO:0046654;
allko_ids K00548; K00796;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725694.1 7 277 evalue:7.2e-95 qcov:96.40 identity:68.60;
kegg_pathway_id 00670; 00790; 00271;
kegg_pathway_name One carbon pool by folate; Folate biosynthesis; Methionine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
metacyc_pathway_id PWY-6548; ALL-CHORISMATE-PWY; FOLSYN-PWY;
metacyc_pathway_name ; superpathway of chorismate metabolism;; superpathway of tetrahydrofolate biosynthesis and salvage;;
metacyc_pathway_type ; Super-Pathways;; Folate-Biosynthesis; Super-Pathways;;
pfam_acc PF00809;
pfam_desc Pterin binding enzyme;
pfam_id Pterin_bind;
pfam_target db:Pfam-A.hmm|PF00809.22 evalue:9.3e-88 score:293.2 best_domain_score:293.0 name:Pterin_bind;
sprot_desc Dihydropteroate synthase;
sprot_id sp|P0AC14|DHPS_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AC14|DHPS_ECOL6 20 281 evalue:5.1e-71 qcov:93.20 identity:53.40;
tigrfam_acc TIGR01496;
tigrfam_desc dihydropteroate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name DHPS;
tigrfam_sub1role Folic acid;
tigrfam_target db:TIGRFAMs.hmm|TIGR01496 evalue:2.9e-101 score:337.6 best_domain_score:337.4 name:TIGR01496;
32588 33937 CDS
ID metaerg.pl|09105
allec_ids 5.4.2.10;
allgo_ids GO:0005975; GO:0016868; GO:0000287; GO:0008966;
allko_ids K01835; K01842; K01840; K01836; K03431; K00966;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725693.1 1 449 evalue:1.5e-195 qcov:100.00 identity:76.80;
kegg_pathway_id 00030; 00051; 00010; 00530; 00500; 00521; 00052;
kegg_pathway_name Pentose phosphate pathway; Fructose and mannose metabolism; Glycolysis / Gluconeogenesis; Aminosugars metabolism; Starch and sucrose metabolism; Streptomycin biosynthesis; Galactose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
metacyc_pathway_id UDPNAGSYN-PWY; PWY-6404; OANTIGEN-PWY;
metacyc_pathway_name UDP-N-acetyl-D-glucosamine biosynthesis I;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; O-antigen building blocks biosynthesis (E. coli);;
metacyc_pathway_type UDP-NAc-Glucosamine-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;;
pfam_acc PF02878; PF02879; PF02880; PF00408;
pfam_desc Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain;
pfam_id PGM_PMM_I; PGM_PMM_II; PGM_PMM_III; PGM_PMM_IV;
pfam_target db:Pfam-A.hmm|PF02878.16 evalue:3.4e-44 score:149.1 best_domain_score:148.3 name:PGM_PMM_I; db:Pfam-A.hmm|PF02879.16 evalue:6.2e-20 score:71.0 best_domain_score:70.0 name:PGM_PMM_II; db:Pfam-A.hmm|PF02880.16 evalue:4.9e-31 score:106.5 best_domain_score:105.7 name:PGM_PMM_III; db:Pfam-A.hmm|PF00408.20 evalue:2.9e-12 score:45.8 best_domain_score:44.3 name:PGM_PMM_IV;
sprot_desc Phosphoglucosamine mutase;
sprot_id sp|Q0A772|GLMM_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0A772|GLMM_ALKEH 1 447 evalue:1.3e-161 qcov:99.60 identity:64.00;
tigrfam_acc TIGR01455;
tigrfam_desc phosphoglucosamine mutase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name glmM;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR01455 evalue:1.8e-185 score:616.0 best_domain_score:615.8 name:TIGR01455;
33934 34884 CDS
ID metaerg.pl|09106
allec_ids 1.14.11.-;
allgo_ids GO:0016491; GO:0055114; GO:0051213; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725692.1 3 316 evalue:5.9e-146 qcov:99.40 identity:78.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
metacyc_pathway_id PWY-6085; PWY-5036; PWY-102; PWY-5070; PWY-5035; PWY-6086; PWY-5153;
metacyc_pathway_name 2,4-dichlorophenoxyacetate degradation;; gibberellin biosynthesis II (early C-3 hydroxylation);; gibberellin inactivation I (2β-hydroxylation);; gibberellin biosynthesis I (non C-3, non C-13 hydroxylation);; gibberellin biosynthesis III (early C-13 hydroxylation);; 4-chloro-2-methylphenoxyacetate degradation;; anthocyanin biosynthesis (delphinidin 3-O-glucoside);;
metacyc_pathway_type Chloroaromatic-Compounds-Degradation;; GIBBERELLINS-BIOSYNTHESIS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; GIBBERELLINS-BIOSYNTHESIS;; GIBBERELLINS-BIOSYNTHESIS;; Chloroaromatic-Compounds-Degradation;; ANTHOCYANIN-SYN;;
pfam_acc PF03171; PF14226;
pfam_desc 2OG-Fe(II) oxygenase superfamily; non-haem dioxygenase in morphine synthesis N-terminal;
pfam_id 2OG-FeII_Oxy; DIOX_N;
pfam_target db:Pfam-A.hmm|PF03171.20 evalue:1.1e-15 score:57.2 best_domain_score:56.5 name:2OG-FeII_Oxy; db:Pfam-A.hmm|PF14226.6 evalue:4.3e-24 score:84.8 best_domain_score:84.3 name:DIOX_N;
sprot_desc Probable 2-oxoglutarate-dependent dioxygenase DIN11;
sprot_id sp|Q8H113|DIN11_ARATH;
sprot_target db:uniprot_sprot|sp|Q8H113|DIN11_ARATH 1 284 evalue:6.2e-25 qcov:89.90 identity:30.00;
36424 35834 CDS
ID metaerg.pl|09107
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725691.1 1 193 evalue:2.3e-60 qcov:98.50 identity:61.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF09186; PF01205;
pfam_desc Domain of unknown function (DUF1949); Uncharacterized protein family UPF0029;
pfam_id DUF1949; UPF0029;
pfam_target db:Pfam-A.hmm|PF09186.11 evalue:1.3e-09 score:37.0 best_domain_score:36.1 name:DUF1949; db:Pfam-A.hmm|PF01205.19 evalue:1.1e-28 score:98.8 best_domain_score:98.3 name:UPF0029;
sprot_desc IMPACT family member HI_0722;
sprot_id sp|P44842|Y722_HAEIN;
sprot_target db:uniprot_sprot|sp|P44842|Y722_HAEIN 12 187 evalue:5.0e-25 qcov:89.80 identity:37.30;
37788 36421 CDS
ID metaerg.pl|09108
allec_ids 3.1.11.6;
allgo_ids GO:0008855;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725690.1 1 454 evalue:4.3e-166 qcov:99.80 identity:67.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF02601; PF13742;
pfam_desc Exonuclease VII, large subunit; OB-fold nucleic acid binding domain;
pfam_id Exonuc_VII_L; tRNA_anti_2;
pfam_target db:Pfam-A.hmm|PF02601.15 evalue:2.5e-98 score:328.6 best_domain_score:328.3 name:Exonuc_VII_L; db:Pfam-A.hmm|PF13742.6 evalue:1.5e-28 score:98.1 best_domain_score:96.6 name:tRNA_anti_2;
tigrfam_acc TIGR00237;
tigrfam_desc exodeoxyribonuclease VII, large subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name xseA;
tigrfam_sub1role Degradation of DNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00237 evalue:1.1e-151 score:504.6 best_domain_score:437.7 name:TIGR00237;
38858 37734 CDS
ID metaerg.pl|09109
allec_ids 2.4.1.-;
allgo_ids GO:0009507; GO:0009941; GO:0031969; GO:0016021; GO:0009536; GO:0008194; GO:0046510; GO:0016036; GO:0009247; GO:0046506;
allko_ids K02844; K13668; K00749; K13677; K00712; K06119;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169591.1 1 374 evalue:6.1e-142 qcov:100.00 identity:65.20;
kegg_pathway_id 01031; 00561; 00540;
kegg_pathway_name Glycan structures - biosynthesis 2; Glycerolipid metabolism; Lipopolysaccharide biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
metacyc_pathway_id PWY-5307; PWY-5399; PWY-5405; PWY-5342; PWY-5343; PWY-2881; PWY-6297; PWY-5338; PWY-5400; PWY-5793; PWY-5380; PWY-5397; PWY-2901; PWY-6404; PWY-5313; PWY-881; PWY-5268; PWY-83; PWY-5379; PWY-5784; ECASYN-PWY; PWY-5284; PWY-5272; PWY-5756; PWY-5160; PWY-5139; PWY-5161; PWY-5800; PWY-5666; PWY-6397; PWY-4421; PWY-5672; PWY-5797; PWY-2021; PWY-5339; PWY-5926; PWY-5398; PWY-5774; PWY-5286; PWY-5759;
metacyc_pathway_name gentiodelphin biosynthesis;; betacyanin biosynthesis;; superpathway of betalain biosynthesis;; ajugose biosynthesis I (galactinol-dependent);; ajugose biosynthesis II (galactinol-independent);; cytokinins 7-N-glucoside biosynthesis;; tuberonate glucoside biosynthesis;; galactosylcyclitol biosynthesis;; amaranthin biosynthesis;; maysin biosynthesis;; A series fagopyritols biosynthesis;; crocetin biosynthesis;; cytokinins 9-N-glucoside biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; trehalose biosynthesis II;; salvianin biosynthesis;; monolignol glucosides biosynthesis;; B series fagopyritols biosynthesis;; indole-3-acetate inactivation VIII;; enterobacterial common antigen biosynthesis;; shisonin biosynthesis;; abscisic acid degradation by glucosylation;; saponin biosynthesis II;; rose anthocyanin biosynthesis I (via cyanidin 5-O-β-D-glucoside);; pelargonidin conjugates biosynthesis;; 6'-deoxychalcone metabolism;; xylan biosynthesis;; α-solanine/α-chaconine biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; curcumin glucoside biosynthesis;; ginsenosides biosynthesis;; indole-3-acetate inactivation VI;; indole-3-acetate inactivation IV;; chalcone 2'-O-glucoside biosynthesis;; afrormosin conjugates interconversion;; crocetin esters biosynthesis;; saponin biosynthesis IV;; anthocyanidin sophoroside metabolism;; saponin biosynthesis III;;
metacyc_pathway_type ANTHOCYANIN-SYN;; BETALAIN-ALKALOIDS;; BETALAIN-ALKALOIDS; Super-Pathways;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Inactivation;; Cyclitols-Biosynthesis;; BETALAIN-ALKALOIDS;; FLAVONE-SYN;; CYCLITOLS-DEG; SUGAR-DERIVS;; APOCAROTENOID-SYN;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Cell-Wall-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN; Super-Pathways;; Trehalose-biosynthesis;; ANTHOCYANIN-SYN;; LIGNIN-SYN; Metabolic-Clusters;; CYCLITOLS-DEG; SUGAR-DERIVS;; Indole-3-Acetate-Inactivation;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; Abscisic-Acid-Degradation; Interconversion;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN;; ANTHOCYANIN-SYN;; CHALCONE-SYN;; SECONDARY-CELL-WALL;; ALKALOIDS-SYN;; Cell-Wall-Biosynthesis;; PHENYLPROPANOID-SYN; POLYKETIDE-SYN;; TRITERPENOID-SYN;; Indole-3-Acetate-Inactivation;; Indole-3-Acetate-Inactivation;; CHALCONE-SYN;; ISOFLAVONOID-SYN; Interconversion;; APOCAROTENOID-SYN;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN; Metabolic-Clusters;; TRITERPENOID-SYN;;
pfam_acc PF00534; PF13439; PF13524; PF13692; PF13579;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1; Glycosyl transferases group 1; Glycosyl transferase 4-like domain;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_2; Glyco_trans_1_4; Glyco_trans_4_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:1.7e-19 score:69.2 best_domain_score:68.2 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:1.6e-16 score:60.0 best_domain_score:58.1 name:Glyco_transf_4; db:Pfam-A.hmm|PF13524.6 evalue:5.2e-06 score:26.0 best_domain_score:24.9 name:Glyco_trans_1_2; db:Pfam-A.hmm|PF13692.6 evalue:3.2e-18 score:65.7 best_domain_score:65.0 name:Glyco_trans_1_4; db:Pfam-A.hmm|PF13579.6 evalue:2.4e-07 score:30.6 best_domain_score:27.8 name:Glyco_trans_4_4;
sprot_desc Sulfoquinovosyl transferase SQD2;
sprot_id sp|Q8S4F6|SQD2_ARATH;
sprot_target db:uniprot_sprot|sp|Q8S4F6|SQD2_ARATH 42 324 evalue:3.7e-21 qcov:75.70 identity:28.00;
39072 40616 CDS
ID metaerg.pl|09110
allec_ids 3.5.-.-;
allgo_ids GO:0006807; GO:0016787;
allko_ids K03820;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725689.1 1 513 evalue:1.4e-285 qcov:99.80 identity:90.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00583; PF00795;
pfam_desc Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase;
pfam_id Acetyltransf_1; CN_hydrolase;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:2.8e-06 score:26.8 best_domain_score:25.3 name:Acetyltransf_1; db:Pfam-A.hmm|PF00795.22 evalue:2.8e-35 score:121.1 best_domain_score:120.8 name:CN_hydrolase;
sprot_desc Hydrolase YhcX;
sprot_id sp|P54608|YHCX_BACSU;
sprot_target db:uniprot_sprot|sp|P54608|YHCX_BACSU 1 514 evalue:7.4e-137 qcov:100.00 identity:42.90;
40692 41033 CDS
ID metaerg.pl|09111
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725687.1 7 104 evalue:5.2e-28 qcov:86.70 identity:63.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF06295;
pfam_desc Protein of unknown function (DUF1043);
pfam_id DUF1043;
pfam_target db:Pfam-A.hmm|PF06295.12 evalue:5.1e-11 score:41.9 best_domain_score:41.4 name:DUF1043;
tm_num 1;
40692 41033 transmembrane_helix
ID metaerg.pl|09112
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology o40704-40760i;
42121 41030 CDS
ID metaerg.pl|09113
allgo_ids GO:0005515; GO:0030288; GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_043740483.1 19 357 evalue:5.6e-132 qcov:93.40 identity:63.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF07995; PF01436;
pfam_desc Glucose / Sorbosone dehydrogenase; NHL repeat;
pfam_id GSDH; NHL;
pfam_target db:Pfam-A.hmm|PF07995.11 evalue:1.2e-131 score:438.2 best_domain_score:438.0 name:GSDH; db:Pfam-A.hmm|PF01436.21 evalue:4.8e-05 score:22.4 best_domain_score:10.8 name:NHL;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P73001|Y1608_SYNY3;
sprot_target db:uniprot_sprot|sp|P73001|Y1608_SYNY3 24 356 evalue:5.0e-95 qcov:91.70 identity:46.70;
41030 41080 signal_peptide
ID metaerg.pl|09114
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
42213 42665 CDS
ID metaerg.pl|09115
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725685.1 1 146 evalue:1.4e-28 qcov:97.30 identity:54.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
sp YES;
tm_num 4;
42213 42275 signal_peptide
ID metaerg.pl|09116
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
42213 42665 transmembrane_helix
ID metaerg.pl|09117
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i42231-42299o42378-42446i42471-42539o42552-42620i;
42829 42626 CDS
ID metaerg.pl|09118
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
sp YES;
tm_num 2;
42626 42670 lipoprotein_signal_peptide
ID metaerg.pl|09119
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
42829 42626 transmembrane_helix
ID metaerg.pl|09120
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology o42635-42688i42749-42817o;
43404 42790 CDS
ID metaerg.pl|09121
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727038.1 1 204 evalue:1.8e-79 qcov:100.00 identity:67.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
sp YES;
42790 42834 lipoprotein_signal_peptide
ID metaerg.pl|09122
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
43532 45208 CDS
ID metaerg.pl|09123
allec_ids 2.7.-.-;
allgo_ids GO:0016021; GO:0005886; GO:0005524; GO:0004672; GO:0010795; GO:0006744;
allko_ids K03688;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725683.1 1 558 evalue:1.8e-251 qcov:100.00 identity:76.90;
kegg_pathway_id 00130;
kegg_pathway_name Ubiquinone biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF03109;
pfam_desc ABC1 family;
pfam_id ABC1;
pfam_target db:Pfam-A.hmm|PF03109.16 evalue:1e-31 score:108.8 best_domain_score:107.3 name:ABC1;
sprot_desc Probable protein kinase UbiB;
sprot_id sp|B2I583|UBIB_XYLF2;
sprot_target db:uniprot_sprot|sp|B2I583|UBIB_XYLF2 54 554 evalue:1.4e-64 qcov:89.80 identity:30.50;
tm_num 2;
43532 45208 transmembrane_helix
ID metaerg.pl|09124
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology o45023-45091i45110-45178o;
47007 45217 CDS
ID metaerg.pl|09125
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Shewanellaceae;g__Ferrimonas;s__Ferrimonas marina;
genomedb_acc GCF_900129905.1;
genomedb_target db:genomedb|GCF_900129905.1|WP_067658434.1 22 501 evalue:7.4e-73 qcov:80.50 identity:37.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
sp YES;
tm_num 1;
45217 45324 signal_peptide
ID metaerg.pl|09126
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
47007 45217 transmembrane_helix
ID metaerg.pl|09127
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i45277-45345o;
47293 50103 CDS
ID metaerg.pl|09128
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__Microbulbifer;s__Microbulbifer donghaiensis;
genomedb_acc GCF_900129095.1;
genomedb_target db:genomedb|GCF_900129095.1|WP_073271390.1 6 935 evalue:5.8e-258 qcov:99.40 identity:50.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF07715; PF00593;
pfam_desc TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:3.7e-18 score:65.3 best_domain_score:63.8 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:2.9e-47 score:161.9 best_domain_score:161.4 name:TonB_dep_Rec;
sp YES;
47293 47361 signal_peptide
ID metaerg.pl|09129
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
50132 51283 CDS
ID metaerg.pl|09130
allec_ids 3.4.19.-; 3.4.19.5;
allgo_ids GO:0016787; GO:0005737; GO:0005829; GO:0008798; GO:0016810; GO:0042802; GO:0008237; GO:0008270;
allko_ids K01305;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas sp003241895;
genomedb_acc GCA_003241895.1;
genomedb_target db:genomedb|GCA_003241895.1|PZO09914.1 1 378 evalue:2.7e-92 qcov:98.70 identity:48.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:4.8e-15 score:54.9 best_domain_score:37.3 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:5.3e-10 score:38.6 best_domain_score:29.1 name:Amidohydro_3;
sprot_desc Isoaspartyl dipeptidase;
sprot_id sp|P39377|IADA_ECOLI;
sprot_target db:uniprot_sprot|sp|P39377|IADA_ECOLI 3 360 evalue:3.1e-63 qcov:93.50 identity:41.30;
tigrfam_acc TIGR01975;
tigrfam_desc beta-aspartyl peptidase;
tigrfam_mainrole Protein fate;
tigrfam_name isoAsp_dipep;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01975 evalue:6.2e-117 score:390.2 best_domain_score:389.9 name:TIGR01975;
51428 52435 CDS
ID metaerg.pl|09131
allec_ids 3.1.3.11;
allgo_ids GO:0005737; GO:0042132; GO:0000287; GO:0006094;
allko_ids K03841;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725680.1 1 335 evalue:3.5e-157 qcov:100.00 identity:81.50;
kegg_pathway_id 00030; 00710; 00051; 00010;
kegg_pathway_name Pentose phosphate pathway; Carbon fixation in photosynthetic organisms; Fructose and mannose metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
metacyc_pathway_id GLYCOLYSIS; CALVIN-PWY; PWY-5484; GLYCOLYSIS-E-D; P461-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; P185-PWY; GLUCONEO-PWY; P441-PWY; PHOTOALL-PWY; ANAEROFRUCAT-PWY;
metacyc_pathway_name glycolysis I (from glucose 6-phosphate);; Calvin-Benson-Bassham cycle;; glycolysis II (from fructose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;; hexitol fermentation to lactate, formate, ethanol and acetate;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; formaldehyde assimilation III (dihydroxyacetone cycle);; gluconeogenesis I;; superpathway of N-acetylneuraminate degradation;; oxygenic photosynthesis;; homolactic fermentation;;
metacyc_pathway_type GLYCOLYSIS-VARIANTS;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Formaldehyde-Assimilation;; Gluconeogenesis;; CARBOXYLATES-DEG; Super-Pathways;; Photosynthesis; Super-Pathways;; Fermentation-to-Lactate; Super-Pathways;;
pfam_acc PF00316;
pfam_desc Fructose-1-6-bisphosphatase, N-terminal domain;
pfam_id FBPase;
pfam_target db:Pfam-A.hmm|PF00316.20 evalue:1.5e-70 score:235.8 best_domain_score:235.4 name:FBPase;
sprot_desc Fructose-1,6-bisphosphatase class 1;
sprot_id sp|A1WZH0|F16PA_HALHL;
sprot_target db:uniprot_sprot|sp|A1WZH0|F16PA_HALHL 1 334 evalue:2.6e-146 qcov:99.70 identity:74.60;
52569 58622 CDS
ID metaerg.pl|09132
allgo_ids GO:0004866; GO:0005886;
allko_ids K06894;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiotrichales;f__Thiotrichaceae;g__Thiolinea;s__Thiolinea sp002747435;
genomedb_acc GCA_002747435.1;
genomedb_target db:genomedb|GCA_002747435.1|PID50261.1 45 2013 evalue:0.0e+00 qcov:97.60 identity:49.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00207; PF07703; PF13205; PF17973; PF01835;
pfam_desc Alpha-2-macroglobulin family; Alpha-2-macroglobulin bait region domain; Bacterial Ig-like domain; Bacterial Alpha-2-macroglobulin MG10 domain; MG2 domain;
pfam_id A2M; A2M_BRD; Big_5; bMG10; MG2;
pfam_target db:Pfam-A.hmm|PF00207.22 evalue:1.6e-19 score:68.8 best_domain_score:67.0 name:A2M; db:Pfam-A.hmm|PF07703.14 evalue:1.6e-15 score:56.9 best_domain_score:54.7 name:A2M_BRD; db:Pfam-A.hmm|PF13205.6 evalue:1.8e-08 score:34.3 best_domain_score:19.8 name:Big_5; db:Pfam-A.hmm|PF17973.1 evalue:8.2e-37 score:125.5 best_domain_score:124.7 name:bMG10; db:Pfam-A.hmm|PF01835.19 evalue:2.1e-14 score:53.0 best_domain_score:45.7 name:MG2;
sp YES;
sprot_desc Alpha-2-macroglobulin homolog;
sprot_id sp|Q8YM40|A2MGH_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YM40|A2MGH_NOSS1 138 2016 evalue:1.7e-115 qcov:93.20 identity:23.40;
52569 52616 lipoprotein_signal_peptide
ID metaerg.pl|09133
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
61781 58671 CDS
ID metaerg.pl|09134
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886;
allko_ids K18138;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__UBA2357;s__UBA2357 sp002872475;
genomedb_acc GCF_002872475.1;
genomedb_target db:genomedb|GCF_002872475.1|WP_102248247.1 1 1030 evalue:0.0e+00 qcov:99.40 identity:72.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00873; PF03176;
pfam_desc AcrB/AcrD/AcrF family; MMPL family;
pfam_id ACR_tran; MMPL;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:2.1e-296 score:985.0 best_domain_score:984.8 name:ACR_tran; db:Pfam-A.hmm|PF03176.15 evalue:1.1e-12 score:46.8 best_domain_score:35.4 name:MMPL;
sprot_desc Uncharacterized transporter HI_0895;
sprot_id sp|Q57124|Y895_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57124|Y895_HAEIN 1 1013 evalue:3.8e-156 qcov:97.80 identity:35.70;
tm_num 12;
61781 58671 transmembrane_helix
ID metaerg.pl|09135
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i58704-58772o59670-59738i59742-59810o59823-59891i59964-60032o60060-60128i60243-60311o61224-61292i61305-61373o61401-61469i61527-61595o61623-61691i;
62776 61778 CDS
ID metaerg.pl|09136
allgo_ids GO:0005886; GO:0055085;
allko_ids K07799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__UBA2357;s__UBA2357 sp002872475;
genomedb_acc GCF_002872475.1;
genomedb_target db:genomedb|GCF_002872475.1|WP_102248248.1 3 329 evalue:5.9e-104 qcov:98.50 identity:63.40;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF13533; PF13437; PF16576;
pfam_desc Biotin-lipoyl like; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF13533.6 evalue:8.7e-09 score:34.3 best_domain_score:32.6 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:1.4e-18 score:66.7 best_domain_score:54.6 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:2.6e-31 score:107.7 best_domain_score:107.0 name:HlyD_D23;
sprot_desc Multidrug resistance protein MdtA;
sprot_id sp|A1JKX1|MDTA_YERE8;
sprot_target db:uniprot_sprot|sp|A1JKX1|MDTA_YERE8 5 312 evalue:1.1e-16 qcov:92.80 identity:25.70;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:6.2e-72 score:241.4 best_domain_score:241.2 name:TIGR01730;
62997 64445 CDS
ID metaerg.pl|09137
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__UBA2363;g__UBA2363;s__UBA2363 sp002344355;
genomedb_acc GCA_002344355.1;
genomedb_target db:genomedb|GCA_002344355.1|DDTN01000034.1_58 20 480 evalue:3.7e-99 qcov:95.60 identity:48.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00990; PF05231;
pfam_desc Diguanylate cyclase, GGDEF domain; MASE1;
pfam_id GGDEF; MASE1;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:4.1e-29 score:100.6 best_domain_score:99.6 name:GGDEF; db:Pfam-A.hmm|PF05231.14 evalue:2.5e-09 score:35.9 best_domain_score:35.3 name:MASE1;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:1.7e-25 score:88.8 best_domain_score:88.3 name:TIGR00254;
tm_num 9;
62997 64445 transmembrane_helix
ID metaerg.pl|09138
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology o63039-63107i63126-63194o63273-63341i63387-63455o63498-63566i63669-63722o63735-63788i63801-63869o63882-63950i;
65838 64531 CDS
ID metaerg.pl|09139
allec_ids 3.6.4.13;
allgo_ids GO:0003676; GO:0005524; GO:0005829; GO:0004004; GO:0003723; GO:0009408; GO:0042255;
allko_ids K13184; K03578; K13177; K01509; K05590; K12812; K12823; K03579; K10896; K12835; K14442; K13185; K13182; K11594; K11927; K05592; K03725; K13982; K01529; K13116; K12614; K14635; K03732; K13181; K03257; K13179; K12858; K13025; K12811; K13178; K05591; K13131;
casgene_acc cd09639_cas3_CAS-I; COG1203_cas3_CAS-I;
casgene_name cas3; cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:2.2e-11 score:42.7 best_domain_score:33.4 name:cas3; db:casgenes.hmm|COG1203_cas3_CAS-I evalue:5.4e-09 score:34.1 best_domain_score:28.8 name:cas3;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169576.1 1 435 evalue:6.2e-170 qcov:100.00 identity:74.70;
kegg_pathway_id 00790; 00230;
kegg_pathway_name Folate biosynthesis; Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF13245; PF00270; PF00271; PF04851;
pfam_desc AAA domain; DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit;
pfam_id AAA_19; DEAD; Helicase_C; ResIII;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:4e-07 score:29.7 best_domain_score:17.4 name:AAA_19; db:Pfam-A.hmm|PF00270.29 evalue:3.3e-53 score:179.3 best_domain_score:177.1 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:2.3e-27 score:94.7 best_domain_score:90.8 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:4e-08 score:32.7 best_domain_score:31.8 name:ResIII;
sprot_desc ATP-dependent RNA helicase RhlE;
sprot_id sp|P25888|RHLE_ECOLI;
sprot_target db:uniprot_sprot|sp|P25888|RHLE_ECOLI 1 374 evalue:3.3e-130 qcov:86.00 identity:62.70;
66086 67768 CDS
ID metaerg.pl|09140
allgo_ids GO:0005886; GO:0071555; GO:0009252; GO:0008360; GO:0030435;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rubricoccaceae;g__Rubricoccus;s__Rubricoccus marinus;
genomedb_acc GCF_002257665.1;
genomedb_target db:genomedb|GCF_002257665.1|WP_094550953.1 14 560 evalue:1.5e-144 qcov:97.70 identity:47.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00144; PF11954;
pfam_desc Beta-lactamase; Domain of unknown function (DUF3471);
pfam_id Beta-lactamase; DUF3471;
pfam_target db:Pfam-A.hmm|PF00144.24 evalue:2.9e-65 score:219.9 best_domain_score:219.4 name:Beta-lactamase; db:Pfam-A.hmm|PF11954.8 evalue:3.1e-13 score:49.3 best_domain_score:25.0 name:DUF3471;
sp YES;
sprot_desc Penicillin-binding protein 4*;
sprot_id sp|P32959|PBPE_BACSU;
sprot_target db:uniprot_sprot|sp|P32959|PBPE_BACSU 50 466 evalue:3.7e-33 qcov:74.50 identity:28.30;
66086 66139 signal_peptide
ID metaerg.pl|09141
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
68218 67805 CDS
ID metaerg.pl|09142
allko_ids K01697; K02806; K00970; K00974; K00088; K00641; K05847;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__HTCC2207;s__HTCC2207 sp002457245;
genomedb_acc GCA_002457245.1;
genomedb_target db:genomedb|GCA_002457245.1|PDH31134.1 1 134 evalue:2.2e-44 qcov:97.80 identity:65.70;
kegg_pathway_id 02060; 02010; 00450; 00260; 00230; 00983; 00271; 00920;
kegg_pathway_name Phosphotransferase system (PTS); ABC transporters - General; Selenoamino acid metabolism; Glycine, serine and threonine metabolism; Purine metabolism; Drug metabolism - other enzymes; Methionine metabolism; Sulfur metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00571;
pfam_desc CBS domain;
pfam_id CBS;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:9.5e-22 score:76.5 best_domain_score:43.3 name:CBS;
73167 68305 CDS
ID metaerg.pl|09143
allgo_ids GO:0005515;
allko_ids K04444; K13490; K08282; K07673; K11265; K03407; K07682; K00924; K04442; K11623; K08884; K07683; K07778; K04372; K01728; K04443; K07675; K07647; K04688; K02486; K01768; K08286; K02489; K04373; K07678; K10715; K11527; K04445; K02480; K02482;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Competibacterales;f__Competibacteraceae;g__Contendobacter;s__Contendobacter odensis;
genomedb_acc GCA_000531125.1;
genomedb_target db:genomedb|GCA_000531125.1|CDH47724.1 1 1611 evalue:1.4e-187 qcov:99.40 identity:31.00;
kegg_pathway_id 04150; 00040; 00230; 02020; 04010;
kegg_pathway_name mTOR signaling pathway; Pentose and glucuronate interconversions; Purine metabolism; Two-component system - General; MAPK signaling pathway;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF13191; PF01590; PF13185; PF00990; PF00069; PF07714;
pfam_desc AAA ATPase domain; GAF domain; GAF domain; Diguanylate cyclase, GGDEF domain; Protein kinase domain; Protein tyrosine kinase;
pfam_id AAA_16; GAF; GAF_2; GGDEF; Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF13191.6 evalue:1.4e-24 score:86.6 best_domain_score:86.6 name:AAA_16; db:Pfam-A.hmm|PF01590.26 evalue:1.8e-10 score:40.8 best_domain_score:38.5 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:4.6e-13 score:48.9 best_domain_score:46.3 name:GAF_2; db:Pfam-A.hmm|PF00990.21 evalue:4e-39 score:133.2 best_domain_score:131.6 name:GGDEF; db:Pfam-A.hmm|PF00069.25 evalue:9.8e-27 score:93.2 best_domain_score:92.5 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:2.1e-17 score:62.5 best_domain_score:61.5 name:Pkinase_Tyr;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:8.2e-39 score:132.1 best_domain_score:130.9 name:TIGR00254;
74738 73269 CDS
ID metaerg.pl|09144
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Marinobacter;s__Marinobacter adhaerens;
genomedb_acc GCF_000166295.1;
genomedb_target db:genomedb|GCF_000166295.1|WP_014578223.1 24 455 evalue:6.1e-158 qcov:88.30 identity:63.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
sprot_desc hypothetical protein;
sprot_id sp|Q9KGA4|Y208_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KGA4|Y208_BACHD 25 469 evalue:5.9e-75 qcov:91.00 identity:39.40;
tm_num 12;
74738 73269 transmembrane_helix
ID metaerg.pl|09145
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i73410-73478o73488-73556i73575-73634o73644-73712i73731-73799o73842-73901i73920-73988o74091-74159i74259-74327o74370-74438i74457-74525o74568-74636i;
75751 74852 CDS
ID metaerg.pl|09146
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Luteimonas;s__Luteimonas sp001683895;
genomedb_acc GCA_001683895.1;
genomedb_target db:genomedb|GCA_001683895.1|LXQJ01000037.1_82 8 278 evalue:5.2e-19 qcov:90.60 identity:29.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00515; PF13414; PF13428; PF14559; PF07719;
pfam_desc Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_11; TPR_14; TPR_19; TPR_2;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:2.4e-08 score:32.7 best_domain_score:19.1 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:2.8e-10 score:39.0 best_domain_score:29.0 name:TPR_11; db:Pfam-A.hmm|PF13428.6 evalue:3.2e-08 score:33.0 best_domain_score:17.3 name:TPR_14; db:Pfam-A.hmm|PF14559.6 evalue:6.9e-07 score:28.9 best_domain_score:15.4 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:1.3e-09 score:36.7 best_domain_score:16.5 name:TPR_2;
sp YES;
74852 74917 signal_peptide
ID metaerg.pl|09147
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
78657 75766 CDS
ID metaerg.pl|09148
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Acidiferrobacterales;f__Sulfurifustaceae;g__SM1-46;s__SM1-46 sp001304215;
genomedb_acc GCA_001304215.1;
genomedb_target db:genomedb|GCA_001304215.1|KPL28339.1 19 963 evalue:2.5e-171 qcov:98.10 identity:38.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF07676;
pfam_desc WD40-like Beta Propeller Repeat;
pfam_id PD40;
pfam_target db:Pfam-A.hmm|PF07676.12 evalue:9.3e-07 score:27.9 best_domain_score:9.5 name:PD40;
sp YES;
75766 75864 signal_peptide
ID metaerg.pl|09149
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
78825 80231 CDS
ID metaerg.pl|09150
allgo_ids GO:0007165; GO:0016021;
allko_ids K07704; K08282; K02484; K02478; K11623; K07651; K07718; K07683; K07778; K07768; K11633; K08884; K07646; K07641; K07673; K07639; K07652; K07654; K07777; K07682; K00936; K03407; K07680; K07675; K02486; K04757; K11617; K11629; K07650; K10681; K07676; K06379; K07655; K02480; K07638; K07653; K07636; K07640; K01768; K07656; K02668; K07674;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Dokdonella;s__Dokdonella sp002297645;
genomedb_acc GCA_002297645.1;
genomedb_target db:genomedb|GCA_002297645.1|DBMH01000285.1_9 102 465 evalue:4.5e-41 qcov:77.80 identity:34.40;
kegg_pathway_id 02020; 03090; 00230;
kegg_pathway_name Two-component system - General; Type II secretion system; Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00672; PF02518; PF07730;
pfam_desc HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase;
pfam_id HAMP; HATPase_c; HisKA_3;
pfam_target db:Pfam-A.hmm|PF00672.25 evalue:1.8e-08 score:33.9 best_domain_score:30.3 name:HAMP; db:Pfam-A.hmm|PF02518.26 evalue:5.6e-09 score:35.7 best_domain_score:33.0 name:HATPase_c; db:Pfam-A.hmm|PF07730.13 evalue:5.7e-13 score:48.4 best_domain_score:48.4 name:HisKA_3;
tm_num 2;
78825 80231 transmembrane_helix
ID metaerg.pl|09151
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology o78900-78968i79374-79442o;
80228 80890 CDS
ID metaerg.pl|09152
allgo_ids GO:0006355; GO:0005737; GO:0003677; GO:0000160; GO:0046677;
allko_ids K07717; K07675; K07647; K11357; K10125; K04757; K02486; K11383; K12767; K07644; K07709; K07676; K10681; K06379; K07678; K10715; K11527; K07636; K07653; K02480; K02482; K07710; K07716; K02489; K10916; K08479; K07674; K03388; K02668; K11231; K08282; K07704; K07677; K11640; K11356; K02484; K07642; K07651; K07648; K02478; K07768; K07778; K07652; K01120; K07673; K07639; K07646; K07641; K03407; K07682; K07654; K07694;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__Anaerolineaceae;g__Anaerolinea;s__Anaerolinea thermophila;
genomedb_acc GCF_000199675.1;
genomedb_target db:genomedb|GCF_000199675.1|WP_013559300.1 9 219 evalue:4.2e-42 qcov:95.90 identity:49.50;
kegg_pathway_id 05111; 00230; 00790; 03090; 04011; 02020;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Folate biosynthesis; Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00196; PF00072; PF08281;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain; Sigma-70, region 4;
pfam_id GerE; Response_reg; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:3.5e-22 score:77.0 best_domain_score:76.3 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:1.9e-23 score:82.0 best_domain_score:81.3 name:Response_reg; db:Pfam-A.hmm|PF08281.12 evalue:1.4e-06 score:27.1 best_domain_score:26.0 name:Sigma70_r4_2;
sprot_desc Response regulator protein VraR;
sprot_id sp|P0C0Z1|VRAR_STAA1;
sprot_target db:uniprot_sprot|sp|P0C0Z1|VRAR_STAA1 10 219 evalue:4.1e-36 qcov:95.50 identity:40.50;
81065 83719 CDS
ID metaerg.pl|09153
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter antibioticus;
genomedb_acc GCF_001442535.1;
genomedb_target db:genomedb|GCF_001442535.1|WP_057970519.1 84 731 evalue:2.3e-203 qcov:73.30 identity:57.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00082;
pfam_desc Subtilase family;
pfam_id Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:3.1e-21 score:75.1 best_domain_score:73.9 name:Peptidase_S8;
sp YES;
tm_num 1;
81065 81142 signal_peptide
ID metaerg.pl|09154
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
81065 83719 transmembrane_helix
ID metaerg.pl|09155
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i81083-81151o;
84459 83800 CDS
ID metaerg.pl|09156
allgo_ids GO:0009055; GO:0020037;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B paradoxus;
genomedb_acc GCF_000227685.2;
genomedb_target db:genomedb|GCF_000227685.2|WP_006748435.1 1 210 evalue:1.7e-51 qcov:95.90 identity:57.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF13442;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III;
pfam_id Cytochrome_CBB3;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:1.3e-13 score:50.2 best_domain_score:49.4 name:Cytochrome_CBB3;
sp YES;
tm_num 1;
83800 83877 signal_peptide
ID metaerg.pl|09157
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
84459 83800 transmembrane_helix
ID metaerg.pl|09158
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology i83818-83886o;
86993 84456 CDS
ID metaerg.pl|09159
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0005507; GO:0005375; GO:0015080; GO:0006878; GO:0060003; GO:0010273; GO:0015679; GO:0046688; GO:0010272; GO:0015673;
allko_ids K07787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725637.1 2 828 evalue:0.0e+00 qcov:97.90 identity:70.10;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
pfam_acc PF00873; PF03176;
pfam_desc AcrB/AcrD/AcrF family; MMPL family;
pfam_id ACR_tran; MMPL;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:1.8e-175 score:584.7 best_domain_score:584.5 name:ACR_tran; db:Pfam-A.hmm|PF03176.15 evalue:2.1e-17 score:62.3 best_domain_score:38.5 name:MMPL;
sprot_desc Cation efflux system protein CusA;
sprot_id sp|P38054|CUSA_ECOLI;
sprot_target db:uniprot_sprot|sp|P38054|CUSA_ECOLI 1 826 evalue:5.0e-223 qcov:97.80 identity:48.30;
tigrfam_acc TIGR00914;
tigrfam_desc heavy metal efflux pump, CzcA family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 2A0601;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR00914 evalue:7.6e-258 score:857.4 best_domain_score:857.1 name:TIGR00914;
tm_num 11;
86993 84456 transmembrane_helix
ID metaerg.pl|09160
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 60.0838; 0.0361103; 60.2485; 0.128574;
topology o84831-84884i84897-84965o84975-85043i85134-85193o85236-85304i85401-85469o86427-86495i86499-86558o86586-86654i86778-86846o86856-86924i;
>Feature NODE_64_length_86571_cov_26.0219
217 2 CDS
ID metaerg.pl|09161
allgo_ids GO:0006400; GO:0016763;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF01702;
pfam_desc Queuine tRNA-ribosyltransferase;
pfam_id TGT;
pfam_target db:Pfam-A.hmm|PF01702.18 evalue:1.2e-07 score:30.4 best_domain_score:30.1 name:TGT;
219 2006 CDS
ID metaerg.pl|09162
allgo_ids GO:0004066; GO:0006529;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas endophytica;
genomedb_acc GCF_002879615.1;
genomedb_target db:genomedb|GCF_002879615.1|WP_102652240.1 1 586 evalue:5.0e-162 qcov:98.50 identity:49.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF00733;
pfam_desc Asparagine synthase;
pfam_id Asn_synthase;
pfam_target db:Pfam-A.hmm|PF00733.21 evalue:1.2e-05 score:24.3 best_domain_score:21.7 name:Asn_synthase;
2944 2003 CDS
ID metaerg.pl|09163
genomedb_OC d__Bacteria;p__Patescibacteria;c__Microgenomatia;o__GWA2-44-7;f__UBA8517;g__UBA5941;s__UBA5941 sp002430735;
genomedb_acc GCA_002430735.1;
genomedb_target db:genomedb|GCA_002430735.1|DJCV01000011.1_66 34 312 evalue:2.8e-55 qcov:89.10 identity:44.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF13472;
pfam_desc GDSL-like Lipase/Acylhydrolase family;
pfam_id Lipase_GDSL_2;
pfam_target db:Pfam-A.hmm|PF13472.6 evalue:1.6e-08 score:34.4 best_domain_score:33.8 name:Lipase_GDSL_2;
4488 3061 CDS
ID metaerg.pl|09164
allgo_ids GO:0003676; GO:0004519;
genomedb_OC d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__GWA2-73-35;g__UBA12499;s__UBA12499 sp001788415;
genomedb_acc GCA_001788415.1;
genomedb_target db:genomedb|GCA_001788415.1|OGK79229.1 45 463 evalue:3.5e-86 qcov:88.20 identity:45.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF02720; PF01844;
pfam_desc Domain of unknown function (DUF222); HNH endonuclease;
pfam_id DUF222; HNH;
pfam_target db:Pfam-A.hmm|PF02720.17 evalue:8.6e-23 score:80.5 best_domain_score:71.5 name:DUF222; db:Pfam-A.hmm|PF01844.23 evalue:4.4e-08 score:32.4 best_domain_score:31.6 name:HNH;
5914 4739 CDS
ID metaerg.pl|09165
allec_ids 2.4.99.17;
allgo_ids GO:0008616; GO:0016740; GO:0016853; GO:0005737;
allko_ids K07568;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25670.1 4 367 evalue:3.5e-116 qcov:93.10 identity:60.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF02547;
pfam_desc Queuosine biosynthesis protein;
pfam_id Queuosine_synth;
pfam_target db:Pfam-A.hmm|PF02547.15 evalue:4.7e-126 score:419.5 best_domain_score:419.3 name:Queuosine_synth;
sprot_desc S-adenosylmethionine:tRNA ribosyltransferase-isomerase;
sprot_id sp|Q2RHU2|QUEA_MOOTA;
sprot_target db:uniprot_sprot|sp|Q2RHU2|QUEA_MOOTA 9 368 evalue:1.7e-93 qcov:92.10 identity:51.40;
tigrfam_acc TIGR00113;
tigrfam_desc S-adenosylmethionine:tRNA ribosyltransferase-isomerase;
tigrfam_mainrole Protein synthesis;
tigrfam_name queA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00113 evalue:1.4e-116 score:388.4 best_domain_score:388.2 name:TIGR00113;
7005 5911 CDS
ID metaerg.pl|09166
allec_ids 3.6.4.12;
allgo_ids GO:0005524; GO:0003677; GO:0009378; GO:0006310; GO:0006281; GO:0009432;
allko_ids K03551;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000047.1_55 14 351 evalue:2.9e-136 qcov:92.90 identity:72.90;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF00004; PF07728; PF17864; PF01078; PF05491; PF05496;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); RuvB AAA lid domain; Magnesium chelatase, subunit ChlI; RuvB C-terminal winged helix domain; Holliday junction DNA helicase RuvB P-loop domain;
pfam_id AAA; AAA_5; AAA_lid_4; Mg_chelatase; RuvB_C; RuvB_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:3.5e-16 score:59.1 best_domain_score:58.3 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:1.2e-08 score:34.2 best_domain_score:25.4 name:AAA_5; db:Pfam-A.hmm|PF17864.1 evalue:3.4e-32 score:109.3 best_domain_score:108.4 name:AAA_lid_4; db:Pfam-A.hmm|PF01078.21 evalue:6.4e-07 score:28.2 best_domain_score:21.2 name:Mg_chelatase; db:Pfam-A.hmm|PF05491.13 evalue:2.8e-25 score:87.2 best_domain_score:86.5 name:RuvB_C; db:Pfam-A.hmm|PF05496.12 evalue:8.9e-70 score:232.7 best_domain_score:232.2 name:RuvB_N;
sprot_desc Holliday junction ATP-dependent DNA helicase RuvB;
sprot_id sp|C1A611|RUVB_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A611|RUVB_GEMAT 12 350 evalue:1.9e-118 qcov:93.10 identity:64.90;
tigrfam_acc TIGR00635;
tigrfam_desc Holliday junction DNA helicase RuvB;
tigrfam_mainrole DNA metabolism;
tigrfam_name ruvB;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00635 evalue:1.4e-130 score:434.0 best_domain_score:433.8 name:TIGR00635;
7622 7002 CDS
ID metaerg.pl|09167
allec_ids 3.6.4.12;
allgo_ids GO:0005524; GO:0006281; GO:0006310; GO:0009378; GO:0009379; GO:0003677; GO:0009432;
allko_ids K03550;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000219.1_5 1 206 evalue:2.6e-41 qcov:100.00 identity:51.50;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF14520; PF07499; PF01330;
pfam_desc Helix-hairpin-helix domain; RuvA, C-terminal domain; RuvA N terminal domain;
pfam_id HHH_5; RuvA_C; RuvA_N;
pfam_target db:Pfam-A.hmm|PF14520.6 evalue:2.4e-09 score:36.9 best_domain_score:35.9 name:HHH_5; db:Pfam-A.hmm|PF07499.13 evalue:1.3e-07 score:31.2 best_domain_score:30.1 name:RuvA_C; db:Pfam-A.hmm|PF01330.21 evalue:1.8e-10 score:40.0 best_domain_score:37.9 name:RuvA_N;
sprot_desc Holliday junction ATP-dependent DNA helicase RuvA;
sprot_id sp|Q72GZ9|RUVA_THET2;
sprot_target db:uniprot_sprot|sp|Q72GZ9|RUVA_THET2 1 203 evalue:2.4e-22 qcov:98.50 identity:39.20;
8149 7619 CDS
ID metaerg.pl|09168
allec_ids 3.1.22.4;
allgo_ids GO:0004520; GO:0006281; GO:0006310; GO:0008821; GO:0000287; GO:0003676;
allko_ids K01159;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000026.1_60 8 171 evalue:1.1e-48 qcov:93.20 identity:62.40;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF02075;
pfam_desc Crossover junction endodeoxyribonuclease RuvC;
pfam_id RuvC;
pfam_target db:Pfam-A.hmm|PF02075.17 evalue:1.7e-50 score:170.0 best_domain_score:169.8 name:RuvC;
sprot_desc Crossover junction endodeoxyribonuclease RuvC;
sprot_id sp|A4J535|RUVC_DESRM;
sprot_target db:uniprot_sprot|sp|A4J535|RUVC_DESRM 12 162 evalue:2.4e-34 qcov:85.80 identity:43.70;
tigrfam_acc TIGR00228;
tigrfam_desc crossover junction endodeoxyribonuclease RuvC;
tigrfam_mainrole DNA metabolism;
tigrfam_name ruvC;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00228 evalue:8.4e-45 score:151.6 best_domain_score:151.4 name:TIGR00228;
8895 8146 CDS
ID metaerg.pl|09169
allgo_ids GO:0005737; GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89715.1 1 249 evalue:8.3e-95 qcov:100.00 identity:73.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF01709;
pfam_desc Transcriptional regulator;
pfam_id Transcrip_reg;
pfam_target db:Pfam-A.hmm|PF01709.20 evalue:1.7e-91 score:305.2 best_domain_score:305.0 name:Transcrip_reg;
sprot_desc Probable transcriptional regulatory protein PERMA_0079;
sprot_id sp|C0QT62|Y079_PERMH;
sprot_target db:uniprot_sprot|sp|C0QT62|Y079_PERMH 1 241 evalue:9.6e-74 qcov:96.80 identity:56.80;
tigrfam_acc TIGR01033;
tigrfam_desc DNA-binding regulatory protein, YebC/PmpR family;
tigrfam_mainrole Regulatory functions;
tigrfam_name TIGR01033;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01033 evalue:5.1e-93 score:310.4 best_domain_score:310.2 name:TIGR01033;
9848 8946 CDS
ID metaerg.pl|09170
allgo_ids GO:0006890; GO:0016021;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000004.1_140 1 300 evalue:1.1e-64 qcov:100.00 identity:53.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF08551; PF01694;
pfam_desc Eukaryotic integral membrane protein (DUF1751); Rhomboid family;
pfam_id DUF1751; Rhomboid;
pfam_target db:Pfam-A.hmm|PF08551.10 evalue:1e-07 score:31.7 best_domain_score:31.7 name:DUF1751; db:Pfam-A.hmm|PF01694.22 evalue:2e-31 score:108.2 best_domain_score:107.6 name:Rhomboid;
tm_num 5;
9848 8946 transmembrane_helix
ID metaerg.pl|09171
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology i9006-9074o9117-9185i9234-9302o9315-9383i9402-9470o;
10872 9856 CDS
ID metaerg.pl|09172
allec_ids 6.3.2.4;
allgo_ids GO:0005524; GO:0046872; GO:0005829; GO:0008716; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01921;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000095.1_2 11 330 evalue:1.1e-86 qcov:94.70 identity:52.00;
kegg_pathway_id 00473; 00550;
kegg_pathway_name D-Alanine metabolism; Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-6387; PWY-6385; PWY-5265; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6386; PWY-6470;
metacyc_pathway_name UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF02655; PF02786; PF07478; PF01820;
pfam_desc ATP-grasp domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus;
pfam_id ATP-grasp_3; CPSase_L_D2; Dala_Dala_lig_C; Dala_Dala_lig_N;
pfam_target db:Pfam-A.hmm|PF02655.14 evalue:7.8e-06 score:25.3 best_domain_score:23.7 name:ATP-grasp_3; db:Pfam-A.hmm|PF02786.17 evalue:8.8e-06 score:24.6 best_domain_score:21.4 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:2.2e-52 score:176.8 best_domain_score:176.4 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF01820.21 evalue:5.1e-21 score:74.3 best_domain_score:72.5 name:Dala_Dala_lig_N;
sprot_desc D-alanine--D-alanine ligase A;
sprot_id sp|Q9HWI0|DDLA_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HWI0|DDLA_PSEAE 11 328 evalue:9.4e-72 qcov:94.10 identity:45.40;
tigrfam_acc TIGR01205;
tigrfam_desc D-alanine--D-alanine ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name D_ala_D_alaTIGR;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01205 evalue:8.7e-85 score:283.6 best_domain_score:283.4 name:TIGR01205;
12263 10869 CDS
ID metaerg.pl|09173
allec_ids 4.2.1.22;
allgo_ids GO:0005737; GO:0004122; GO:0019343;
allko_ids K10150; K01738; K12339; K01754; K13034; K01697;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000337.1_43 7 460 evalue:8.3e-181 qcov:97.80 identity:69.20;
kegg_pathway_id 00260; 00272; 00920; 00271; 00450; 00290;
kegg_pathway_name Glycine, serine and threonine metabolism; Cysteine metabolism; Sulfur metabolism; Methionine metabolism; Selenoamino acid metabolism; Valine, leucine and isoleucine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-6292; PWY-821; PWY-5328; HOMOCYSDEGR-PWY; PWY-6293; PWY-801;
metacyc_pathway_name superpathway of L-cysteine biosynthesis (mammalian);; superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae);; superpathway of L-methionine salvage and degradation;; L-cysteine biosynthesis III (from L-homocysteine);; superpathway of L-cysteine biosynthesis (fungi);; homocysteine and cysteine interconversion;;
metacyc_pathway_type CYSTEINE-SYN; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; METHIONINE-DEG; Super-Pathways;; CYSTEINE-SYN; HOMOCYSTEINE-DEG;; CYSTEINE-SYN; Super-Pathways;; CYSTEINE-SYN; Interconversion;;
pfam_acc PF00571; PF00291;
pfam_desc CBS domain; Pyridoxal-phosphate dependent enzyme;
pfam_id CBS; PALP;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:1.4e-10 score:40.7 best_domain_score:21.5 name:CBS; db:Pfam-A.hmm|PF00291.25 evalue:8.3e-68 score:228.2 best_domain_score:227.9 name:PALP;
sprot_desc Putative cystathionine beta-synthase MT1108;
sprot_id sp|P9WP50|Y1077_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WP50|Y1077_MYCTO 15 462 evalue:1.2e-93 qcov:96.60 identity:43.30;
12616 12260 CDS
ID metaerg.pl|09174
allgo_ids GO:0055085;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000337.1_41 4 116 evalue:1.8e-31 qcov:95.80 identity:59.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF03544;
pfam_desc Gram-negative bacterial TonB protein C-terminal;
pfam_id TonB_C;
pfam_target db:Pfam-A.hmm|PF03544.14 evalue:1e-17 score:63.6 best_domain_score:63.3 name:TonB_C;
sp YES;
tigrfam_acc TIGR01352;
tigrfam_desc TonB family C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name tonB_Cterm;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01352 evalue:2e-16 score:59.3 best_domain_score:58.9 name:TIGR01352;
12260 12307 lipoprotein_signal_peptide
ID metaerg.pl|09175
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
15247 12617 CDS
ID metaerg.pl|09176
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0003684;
allko_ids K03555;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000047.1_90 10 871 evalue:0.0e+00 qcov:98.40 identity:66.60;
kegg_pathway_id 03430;
kegg_pathway_name Mismatch repair;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF01624; PF05188; PF05192; PF05190; PF00488;
pfam_desc MutS domain I; MutS domain II; MutS domain III; MutS family domain IV; MutS domain V;
pfam_id MutS_I; MutS_II; MutS_III; MutS_IV; MutS_V;
pfam_target db:Pfam-A.hmm|PF01624.20 evalue:9.7e-40 score:134.6 best_domain_score:133.5 name:MutS_I; db:Pfam-A.hmm|PF05188.17 evalue:1.4e-14 score:53.8 best_domain_score:49.3 name:MutS_II; db:Pfam-A.hmm|PF05192.18 evalue:7.8e-40 score:136.4 best_domain_score:135.7 name:MutS_III; db:Pfam-A.hmm|PF05190.18 evalue:2.1e-30 score:104.1 best_domain_score:102.9 name:MutS_IV; db:Pfam-A.hmm|PF00488.21 evalue:1e-83 score:279.3 best_domain_score:278.5 name:MutS_V;
sprot_desc DNA mismatch repair protein MutS;
sprot_id sp|Q01X96|MUTS_SOLUE;
sprot_target db:uniprot_sprot|sp|Q01X96|MUTS_SOLUE 11 874 evalue:4.0e-215 qcov:98.60 identity:49.50;
tigrfam_acc TIGR01070;
tigrfam_desc DNA mismatch repair protein MutS;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutS1;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01070 evalue:7.6e-298 score:989.6 best_domain_score:989.4 name:TIGR01070;
15371 15826 CDS
ID metaerg.pl|09177
allec_ids 3.2.2.15;
allko_ids K03649;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Pseudoxanthomonas_A;s__Pseudoxanthomonas_A sp001427635;
genomedb_acc GCF_001427635.1;
genomedb_target db:genomedb|GCF_001427635.1|WP_055939473.1 1 151 evalue:8.2e-37 qcov:100.00 identity:53.60;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF03167;
pfam_desc Uracil DNA glycosylase superfamily;
pfam_id UDG;
pfam_target db:Pfam-A.hmm|PF03167.19 evalue:1.7e-08 score:33.8 best_domain_score:32.9 name:UDG;
tigrfam_acc TIGR04274;
tigrfam_desc DNA-deoxyinosine glycosylase;
tigrfam_name hypoxanDNAglyco;
tigrfam_target db:TIGRFAMs.hmm|TIGR04274 evalue:4.4e-35 score:120.2 best_domain_score:120.0 name:TIGR04274;
15858 16052 CDS
ID metaerg.pl|09178
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
16049 16822 CDS
ID metaerg.pl|09179
allgo_ids GO:0003677; GO:0006303; GO:0003690; GO:0006310;
allko_ids K10979;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas chromatireducens;
genomedb_acc GCF_001545155.1;
genomedb_target db:genomedb|GCF_001545155.1|WP_066444961.1 1 252 evalue:2.4e-68 qcov:98.10 identity:52.80;
kegg_pathway_id 03450;
kegg_pathway_name Non-homologous end-joining;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF02735;
pfam_desc Ku70/Ku80 beta-barrel domain;
pfam_id Ku;
pfam_target db:Pfam-A.hmm|PF02735.16 evalue:2.8e-19 score:68.9 best_domain_score:68.5 name:Ku;
sprot_desc Non-homologous end joining protein Ku;
sprot_id sp|B4UFZ1|KU_ANASK;
sprot_target db:uniprot_sprot|sp|B4UFZ1|KU_ANASK 3 253 evalue:8.5e-33 qcov:97.70 identity:39.00;
16815 17666 CDS
ID metaerg.pl|09180
allgo_ids GO:0003677; GO:0006303; GO:0003690; GO:0006310;
allko_ids K10979;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_A;s__Halomonas_A xinjiangensis;
genomedb_acc GCF_000759345.1;
genomedb_target db:genomedb|GCF_000759345.1|WP_043528116.1 7 283 evalue:5.4e-66 qcov:97.90 identity:51.40;
kegg_pathway_id 03450;
kegg_pathway_name Non-homologous end-joining;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF02735;
pfam_desc Ku70/Ku80 beta-barrel domain;
pfam_id Ku;
pfam_target db:Pfam-A.hmm|PF02735.16 evalue:7.6e-29 score:100.1 best_domain_score:99.8 name:Ku;
sprot_desc Non-homologous end joining protein Ku 1;
sprot_id sp|A5G742|KU1_GEOUR;
sprot_target db:uniprot_sprot|sp|A5G742|KU1_GEOUR 14 234 evalue:1.5e-38 qcov:78.10 identity:40.80;
tm_num 1;
16815 17666 transmembrane_helix
ID metaerg.pl|09181
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology o16842-16910i;
20166 17701 CDS
ID metaerg.pl|09182
allec_ids 6.5.1.1;
allgo_ids GO:0003910; GO:0006281; GO:0006310; GO:0005524; GO:0003677; GO:0003887; GO:0004532; GO:0046872; GO:0016779; GO:0071897; GO:0090503;
allko_ids K01971;
genomedb_OC d__Bacteria;p__Desulfuromonadota;c__Desulfuromonadia;o__Desulfuromonadales;f__ATBO01;g__ATBO01;s__ATBO01 sp000472285;
genomedb_acc GCF_000472285.1;
genomedb_target db:genomedb|GCF_000472285.1|WP_027714441.1 2 816 evalue:7.4e-249 qcov:99.30 identity:49.80;
kegg_pathway_id 03420; 03450; 03430; 03410;
kegg_pathway_name Nucleotide excision repair; Non-homologous end-joining; Mismatch repair; Base excision repair;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF04679; PF01068; PF13298;
pfam_desc ATP dependent DNA ligase C terminal region ; ATP dependent DNA ligase domain; DNA polymerase Ligase (LigD);
pfam_id DNA_ligase_A_C; DNA_ligase_A_M; LigD_N;
pfam_target db:Pfam-A.hmm|PF04679.15 evalue:2.2e-22 score:78.7 best_domain_score:77.5 name:DNA_ligase_A_C; db:Pfam-A.hmm|PF01068.21 evalue:1.8e-20 score:72.7 best_domain_score:72.2 name:DNA_ligase_A_M; db:Pfam-A.hmm|PF13298.6 evalue:2.3e-36 score:123.5 best_domain_score:122.8 name:LigD_N;
sprot_desc Multifunctional non-homologous end joining protein LigD;
sprot_id sp|Q9I1X7|LIGD_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I1X7|LIGD_PSEAE 4 818 evalue:8.1e-186 qcov:99.30 identity:42.00;
tigrfam_acc TIGR02776; TIGR02777; TIGR02778; TIGR02779;
tigrfam_desc DNA ligase D; DNA ligase D, 3'-phosphoesterase domain; DNA ligase D, polymerase domain; DNA ligase D, ligase domain;
tigrfam_mainrole DNA metabolism; DNA metabolism;
tigrfam_name NHEJ_ligase_prk; LigD_PE_dom; ligD_pol; NHEJ_ligase_lig;
tigrfam_sub1role DNA replication, recombination, and repair; DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02776 evalue:1.2e-198 score:660.8 best_domain_score:660.6 name:TIGR02776; db:TIGRFAMs.hmm|TIGR02777 evalue:6.7e-62 score:207.0 best_domain_score:206.4 name:TIGR02777; db:TIGRFAMs.hmm|TIGR02778 evalue:1e-93 score:312.7 best_domain_score:312.3 name:TIGR02778; db:TIGRFAMs.hmm|TIGR02779 evalue:1.9e-97 score:325.3 best_domain_score:324.9 name:TIGR02779;
21079 20159 CDS
ID metaerg.pl|09183
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__ZC4RG39;s__ZC4RG39 sp003242495;
genomedb_acc GCA_003242495.1;
genomedb_target db:genomedb|GCA_003242495.1|PZN33247.1 8 303 evalue:1.1e-80 qcov:96.70 identity:55.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF03631;
pfam_desc Virulence factor BrkB;
pfam_id Virul_fac_BrkB;
pfam_target db:Pfam-A.hmm|PF03631.15 evalue:1.1e-55 score:188.3 best_domain_score:188.1 name:Virul_fac_BrkB;
tigrfam_acc TIGR00765;
tigrfam_desc YihY family inner membrane protein;
tigrfam_mainrole Unknown function;
tigrfam_name yihY_not_rbn;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00765 evalue:1.2e-23 score:83.4 best_domain_score:83.0 name:TIGR00765;
tm_num 6;
21079 20159 transmembrane_helix
ID metaerg.pl|09184
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology i20249-20317o20429-20497i20582-20650o20693-20761i20798-20866o20894-20962i;
21198 23336 CDS
ID metaerg.pl|09185
allec_ids 1.11.1.6;
allgo_ids GO:0004096; GO:0020037; GO:0055114; GO:0005737; GO:0046872; GO:0042744; GO:0006979;
allko_ids K03781;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rubricoccaceae;g__Rubricoccus;s__Rubricoccus marinus;
genomedb_acc GCF_002257665.1;
genomedb_target db:genomedb|GCF_002257665.1|WP_094551987.1 1 711 evalue:8.0e-284 qcov:99.90 identity:68.10;
kegg_pathway_id 05014; 00680; 00380;
kegg_pathway_name Amyotrophic lateral sclerosis (ALS); Methane metabolism; Tryptophan metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id DETOX1-PWY; PWY-5506;
metacyc_pathway_name superoxide radicals degradation;; methanol oxidation to formaldehyde IV;;
metacyc_pathway_type REACTIVE-OXYGEN-SPECIES-DEGRADATION;; Methanol-Oxidation;;
pfam_acc PF00199; PF06628; PF18011; PF01965;
pfam_desc Catalase; Catalase-related immune-responsive; C-terminal domain found in long catalases; DJ-1/PfpI family;
pfam_id Catalase; Catalase-rel; Catalase_C; DJ-1_PfpI;
pfam_target db:Pfam-A.hmm|PF00199.19 evalue:2.1e-183 score:609.0 best_domain_score:606.4 name:Catalase; db:Pfam-A.hmm|PF06628.12 evalue:2.7e-19 score:68.4 best_domain_score:66.8 name:Catalase-rel; db:Pfam-A.hmm|PF18011.1 evalue:1.3e-19 score:69.6 best_domain_score:68.8 name:Catalase_C; db:Pfam-A.hmm|PF01965.24 evalue:1e-09 score:37.6 best_domain_score:36.9 name:DJ-1_PfpI;
sprot_desc Catalase;
sprot_id sp|P30266|CATE_BACPE;
sprot_target db:uniprot_sprot|sp|P30266|CATE_BACPE 5 705 evalue:1.8e-242 qcov:98.50 identity:59.90;
23323 23772 CDS
ID metaerg.pl|09186
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
tm_num 4;
23323 23772 transmembrane_helix
ID metaerg.pl|09187
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology i23359-23427o23455-23508i23554-23622o23632-23700i;
25254 23779 CDS
ID metaerg.pl|09188
allgo_ids GO:0003824;
allko_ids K01586;
genomedb_OC d__Bacteria;p__Planctomycetota;c__Planctomycetes;o__Planctomycetales;f__Planctomycetaceae;g__UBA9033;s__UBA9033 sp002359185;
genomedb_acc GCA_002359185.1;
genomedb_target db:genomedb|GCA_002359185.1|DEML01000026.1_2 7 487 evalue:1.9e-122 qcov:98.00 identity:48.40;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF02784;
pfam_desc Pyridoxal-dependent decarboxylase, pyridoxal binding domain;
pfam_id Orn_Arg_deC_N;
pfam_target db:Pfam-A.hmm|PF02784.16 evalue:1.9e-24 score:85.6 best_domain_score:84.9 name:Orn_Arg_deC_N;
26960 25251 CDS
ID metaerg.pl|09189
genomedb_OC d__Bacteria;p__Planctomycetota;c__Planctomycetes;o__Planctomycetales;f__Planctomycetaceae;g__UBA9033;s__UBA9033 sp002359185;
genomedb_acc GCA_002359185.1;
genomedb_target db:genomedb|GCA_002359185.1|DEML01000026.1_3 4 549 evalue:7.5e-75 qcov:96.00 identity:34.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF13454;
pfam_desc FAD-NAD(P)-binding;
pfam_id NAD_binding_9;
pfam_target db:Pfam-A.hmm|PF13454.6 evalue:4.2e-28 score:97.5 best_domain_score:96.8 name:NAD_binding_9;
28024 26957 CDS
ID metaerg.pl|09190
allec_ids 2.5.1.140;
allgo_ids GO:0016740; GO:0006535;
allko_ids K13034; K01697; K12339; K01738; K10150; K21949;
genomedb_OC d__Bacteria;p__Planctomycetota;c__Planctomycetes;o__Pirellulales;f__Pirellulaceae;g__Rhodopirellula_A;s__Rhodopirellula_A maiorica;
genomedb_acc GCF_000346295.1;
genomedb_target db:genomedb|GCF_000346295.1|WP_008701280.1 22 353 evalue:2.7e-91 qcov:93.50 identity:53.80;
kegg_pathway_id 00260; 00272; 00450; 00920; 00271;
kegg_pathway_name Glycine, serine and threonine metabolism; Cysteine metabolism; Selenoamino acid metabolism; Sulfur metabolism; Methionine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:6.2e-51 score:172.8 best_domain_score:172.5 name:PALP;
sprot_desc N-(2-amino-2-carboxyethyl)-L-glutamate synthase;
sprot_id sp|Q44004|SBNA_CUPMC;
sprot_target db:uniprot_sprot|sp|Q44004|SBNA_CUPMC 22 335 evalue:1.3e-52 qcov:88.50 identity:38.70;
28181 28693 CDS
ID metaerg.pl|09191
allgo_ids GO:0006974;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Skermanella;s__Skermanella stibiiresistens;
genomedb_acc GCF_000576635.1;
genomedb_target db:genomedb|GCF_000576635.1|WP_037460690.1 1 164 evalue:1.6e-33 qcov:96.50 identity:51.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF05974;
pfam_desc Domain of unknown function (DUF892);
pfam_id DUF892;
pfam_target db:Pfam-A.hmm|PF05974.12 evalue:3.5e-53 score:179.1 best_domain_score:178.9 name:DUF892;
sprot_desc hypothetical protein;
sprot_id sp|P21362|YCIF_ECOLI;
sprot_target db:uniprot_sprot|sp|P21362|YCIF_ECOLI 1 161 evalue:7.1e-28 qcov:94.70 identity:44.40;
29786 28728 CDS
ID metaerg.pl|09192
allgo_ids GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Desulfobacterota_A;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfonatronaceae;g__Desulfonatronum;s__Desulfonatronum thiodismutans;
genomedb_acc GCF_000717475.1;
genomedb_target db:genomedb|GCF_000717475.1|WP_084184895.1 22 344 evalue:3.7e-80 qcov:91.80 identity:50.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF00924;
pfam_desc Mechanosensitive ion channel;
pfam_id MS_channel;
pfam_target db:Pfam-A.hmm|PF00924.18 evalue:9.5e-28 score:96.4 best_domain_score:95.6 name:MS_channel;
tm_num 4;
29786 28728 transmembrane_helix
ID metaerg.pl|09193
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology i28752-28820o28974-29042i29124-29183o29196-29264i;
30353 29832 CDS
ID metaerg.pl|09194
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
sp YES;
tm_num 1;
29832 29939 signal_peptide
ID metaerg.pl|09195
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
30353 29832 transmembrane_helix
ID metaerg.pl|09196
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology i29850-29918o;
30623 31762 CDS
ID metaerg.pl|09197
allec_ids 1.11.2.4;
allgo_ids GO:0005506; GO:0016705; GO:0020037; GO:0055114; GO:0004601; GO:0006631;
allko_ids K15629;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus aerius;
genomedb_acc GCF_002897375.1;
genomedb_target db:genomedb|GCF_002897375.1|WP_103128162.1 1 372 evalue:1.1e-117 qcov:98.20 identity:57.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF00067;
pfam_desc Cytochrome P450;
pfam_id p450;
pfam_target db:Pfam-A.hmm|PF00067.22 evalue:2.2e-11 score:42.4 best_domain_score:41.8 name:p450;
sprot_desc Fatty-acid peroxygenase;
sprot_id sp|I3DZK9|CYPC_BACMM;
sprot_target db:uniprot_sprot|sp|I3DZK9|CYPC_BACMM 1 374 evalue:3.0e-103 qcov:98.70 identity:47.60;
31759 32670 CDS
ID metaerg.pl|09198
genomedb_OC d__Bacteria;p__Chloroflexota_A;c__Ellin6529;o__CSP1-4;f__CSP1-4;g__Palsa-1033;s__Palsa-1033 sp003152165;
genomedb_acc GCA_003152165.1;
genomedb_target db:genomedb|GCA_003152165.1|PLZO01000043.1_37 1 298 evalue:9.1e-11 qcov:98.30 identity:30.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.3e-28 score:99.5 best_domain_score:56.3 name:Usp;
34730 32667 CDS
ID metaerg.pl|09199
allec_ids 2.4.1.1;
allgo_ids GO:0005975; GO:0008184; GO:0102250; GO:0030170; GO:0102499; GO:0000023;
allko_ids K00688;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Tc-Br11-B2g6-7;s__Tc-Br11-B2g6-7 sp001564055;
genomedb_acc GCA_001564055.1;
genomedb_target db:genomedb|GCA_001564055.1|LKNB01000029.1_28 15 682 evalue:8.1e-225 qcov:97.20 identity:56.00;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-842; PWY-5767; GLYCOCAT-PWY; PWY-5941;
metacyc_pathway_name starch degradation I;; ; glycogen degradation I;; glycogen degradation II;;
metacyc_pathway_type Glycan-Degradation; Starch-Degradation;; ; Glycan-Degradation; Glycogen-Degradation;; Glycan-Degradation; Glycogen-Degradation;;
pfam_acc PF11897; PF00343;
pfam_desc Protein of unknown function (DUF3417); Carbohydrate phosphorylase;
pfam_id DUF3417; Phosphorylase;
pfam_target db:Pfam-A.hmm|PF11897.8 evalue:4.9e-21 score:74.5 best_domain_score:72.9 name:DUF3417; db:Pfam-A.hmm|PF00343.20 evalue:1.3e-19 score:69.2 best_domain_score:47.1 name:Phosphorylase;
sprot_desc Maltodextrin phosphorylase;
sprot_id sp|Q9YGA7|PHSG_THELN;
sprot_target db:uniprot_sprot|sp|Q9YGA7|PHSG_THELN 9 682 evalue:4.4e-153 qcov:98.10 identity:41.00;
tigrfam_acc TIGR02094;
tigrfam_desc alpha-glucan phosphorylases;
tigrfam_name more_P_ylases;
tigrfam_target db:TIGRFAMs.hmm|TIGR02094 evalue:3.4e-231 score:768.3 best_domain_score:768.1 name:TIGR02094;
34880 36241 CDS
ID metaerg.pl|09200
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Microcystaceae;g__Cyanothece_B;s__Cyanothece_B sp000021825;
genomedb_acc GCF_000021825.1;
genomedb_target db:genomedb|GCF_000021825.1|WP_015955882.1 1 450 evalue:5.5e-105 qcov:99.30 identity:42.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF00266;
pfam_desc Aminotransferase class-V;
pfam_id Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:3.8e-28 score:97.7 best_domain_score:96.5 name:Aminotran_5;
sp YES;
34880 34960 signal_peptide
ID metaerg.pl|09201
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
36290 38437 CDS
ID metaerg.pl|09202
allec_ids 3.2.1.-;
allgo_ids GO:0003824; GO:0005975; GO:0004133; GO:0004553; GO:0005980;
allko_ids K01200; K00700; K01236; K01176;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Nitrosococcaceae;g__Nitrosococcus;s__Nitrosococcus watsonii;
genomedb_acc GCF_000143085.1;
genomedb_target db:genomedb|GCF_000143085.1|WP_013220388.1 11 715 evalue:1.8e-275 qcov:98.60 identity:61.80;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-5825; PWY-5821; SUCROSEUTIL2-PWY; PWY-862; PWY-5976;
metacyc_pathway_name dalpatein and dalnigrein biosynthesis;; dalcochinin biosynthesis;; sucrose degradation VII (sucrose 3-dehydrogenase);; fructan degradation;; dhurrin degradation;;
metacyc_pathway_type ISOFLAVONOID-SYN;; ISOFLAVONOID-SYN;; SUCROSE-DEG;; Glycan-Pathways; POLYSACCHARIDES-DEG;; CYANOGENIC-GLUCOSIDE-DEG;;
pfam_acc PF00128; PF02922;
pfam_desc Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain);
pfam_id Alpha-amylase; CBM_48;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:2.3e-16 score:59.5 best_domain_score:31.6 name:Alpha-amylase; db:Pfam-A.hmm|PF02922.18 evalue:1.6e-21 score:75.7 best_domain_score:74.5 name:CBM_48;
sprot_desc Glycogen operon protein GlgX homolog;
sprot_id sp|P0A4Y5|GLGX_MYCBO;
sprot_target db:uniprot_sprot|sp|P0A4Y5|GLGX_MYCBO 5 714 evalue:2.7e-238 qcov:99.30 identity:56.00;
tigrfam_acc TIGR02100;
tigrfam_desc glycogen debranching enzyme GlgX;
tigrfam_mainrole Energy metabolism;
tigrfam_name glgX_debranch;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02100 evalue:0 score:1023.1 best_domain_score:1022.9 name:TIGR02100;
38397 41147 CDS
ID metaerg.pl|09203
allec_ids 5.4.99.15;
allgo_ids GO:0003824; GO:0005975; GO:0047470;
allko_ids K01236; K01178; K01176; K01182; K01200; K00700; K06044;
genomedb_OC d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__GWA2-73-35;g__AR31;s__AR31 sp003220685;
genomedb_acc GCA_003220685.1;
genomedb_target db:genomedb|GCA_003220685.1|PYN86800.1 12 915 evalue:6.5e-270 qcov:98.70 identity:54.40;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-2661;
metacyc_pathway_name trehalose biosynthesis V;;
metacyc_pathway_type Trehalose-biosynthesis;;
pfam_acc PF00128;
pfam_desc Alpha amylase, catalytic domain;
pfam_id Alpha-amylase;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:6.8e-20 score:71.1 best_domain_score:53.7 name:Alpha-amylase;
sprot_desc Putative maltooligosyl trehalose synthase;
sprot_id sp|P9WQ20|TREY_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WQ20|TREY_MYCTO 28 915 evalue:1.6e-134 qcov:96.90 identity:37.50;
tigrfam_acc TIGR02401;
tigrfam_desc malto-oligosyltrehalose synthase;
tigrfam_mainrole Energy metabolism;
tigrfam_name trehalose_TreY;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02401 evalue:9.2e-272 score:903.2 best_domain_score:903.0 name:TIGR02401;
41144 42898 CDS
ID metaerg.pl|09204
allec_ids 3.2.1.141;
allgo_ids GO:0003824; GO:0005975; GO:0005737; GO:0033942; GO:0005992;
allko_ids K01182; K01176; K01236; K00700; K01200;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A denitrificans;
genomedb_acc GCF_002000365.1;
genomedb_target db:genomedb|GCF_002000365.1|WP_077279968.1 8 579 evalue:3.8e-207 qcov:97.90 identity:61.90;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-2661;
metacyc_pathway_name trehalose biosynthesis V;;
metacyc_pathway_type Trehalose-biosynthesis;;
pfam_acc PF00128; PF11941;
pfam_desc Alpha amylase, catalytic domain; Domain of unknown function (DUF3459);
pfam_id Alpha-amylase; DUF3459;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:2.1e-17 score:62.9 best_domain_score:46.2 name:Alpha-amylase; db:Pfam-A.hmm|PF11941.8 evalue:1.9e-08 score:33.7 best_domain_score:33.7 name:DUF3459;
sprot_desc Malto-oligosyltrehalose trehalohydrolase;
sprot_id sp|Q9AJN6|TREZ_ARTRM;
sprot_target db:uniprot_sprot|sp|Q9AJN6|TREZ_ARTRM 5 568 evalue:5.6e-149 qcov:96.60 identity:48.90;
tigrfam_acc TIGR02402;
tigrfam_desc malto-oligosyltrehalose trehalohydrolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name trehalose_TreZ;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02402 evalue:7.8e-226 score:749.7 best_domain_score:749.5 name:TIGR02402;
44831 42879 CDS
ID metaerg.pl|09205
allec_ids 2.4.1.18;
allgo_ids GO:0003824; GO:0005975; GO:0005829; GO:0003844; GO:0102752; GO:0043169; GO:0004553; GO:0005978;
allko_ids K01178; K01176; K01236; K00700; K00689; K01200;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90178.1 4 637 evalue:1.3e-280 qcov:97.50 identity:70.70;
kegg_pathway_id 02020; 00500;
kegg_pathway_name Two-component system - General; Starch and sucrose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-622; GLYCOGENSYNTH-PWY; PWY-5067;
metacyc_pathway_name starch biosynthesis;; glycogen biosynthesis I (from ADP-D-Glucose);; glycogen biosynthesis II (from UDP-D-Glucose);;
metacyc_pathway_type GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;;
pfam_acc PF00128; PF02806; PF02922;
pfam_desc Alpha amylase, catalytic domain; Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain);
pfam_id Alpha-amylase; Alpha-amylase_C; CBM_48;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:1.2e-12 score:47.3 best_domain_score:36.6 name:Alpha-amylase; db:Pfam-A.hmm|PF02806.18 evalue:8.2e-24 score:83.1 best_domain_score:82.3 name:Alpha-amylase_C; db:Pfam-A.hmm|PF02922.18 evalue:1.6e-19 score:69.3 best_domain_score:67.6 name:CBM_48;
sprot_desc 1,4-alpha-glucan branching enzyme GlgB;
sprot_id sp|O66936|GLGB_AQUAE;
sprot_target db:uniprot_sprot|sp|O66936|GLGB_AQUAE 10 637 evalue:6.7e-244 qcov:96.60 identity:62.40;
tigrfam_acc TIGR01515;
tigrfam_desc 1,4-alpha-glucan branching enzyme;
tigrfam_mainrole Energy metabolism;
tigrfam_name branching_enzym;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01515 evalue:8e-270 score:895.8 best_domain_score:895.6 name:TIGR01515;
46903 44828 CDS
ID metaerg.pl|09206
allec_ids 2.4.1.25;
allgo_ids GO:0004134; GO:0005975; GO:0005737; GO:0102500;
genomedb_OC d__Bacteria;p__Firmicutes_B;c__Desulfotomaculia;o__Desulfotomaculales;f__Pelotomaculaceae;g__DTU098;s__DTU098 sp001512635;
genomedb_acc GCA_001512635.1;
genomedb_target db:genomedb|GCA_001512635.1|LFSA01000011.1_15 1 686 evalue:3.4e-146 qcov:99.30 identity:47.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-5941; PWY-842; GLYCOCAT-PWY; PWY-5767;
metacyc_pathway_name glycogen degradation II;; starch degradation I;; glycogen degradation I;; ;
metacyc_pathway_type Glycan-Degradation; Glycogen-Degradation;; Glycan-Degradation; Starch-Degradation;; Glycan-Degradation; Glycogen-Degradation;; ;
pfam_acc PF02446;
pfam_desc 4-alpha-glucanotransferase;
pfam_id Glyco_hydro_77;
pfam_target db:Pfam-A.hmm|PF02446.17 evalue:3e-84 score:282.8 best_domain_score:282.4 name:Glyco_hydro_77;
sprot_desc 4-alpha-glucanotransferase;
sprot_id sp|P65337|MALQ_MYCBO;
sprot_target db:uniprot_sprot|sp|P65337|MALQ_MYCBO 10 658 evalue:5.2e-69 qcov:93.90 identity:32.00;
tigrfam_acc TIGR00217;
tigrfam_desc 4-alpha-glucanotransferase;
tigrfam_mainrole Energy metabolism;
tigrfam_name malQ;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00217 evalue:1.3e-65 score:221.5 best_domain_score:138.5 name:TIGR00217;
50259 46900 CDS
ID metaerg.pl|09207
allec_ids 5.4.99.16;
allgo_ids GO:0003824; GO:0005975;
allko_ids K01236; K01178; K01176; K01226; K01182; K05343; K01200; K01215; K00700; K01187; K00705;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Chloroflexia;o__Thermomicrobiales;f__Thermomicrobiaceae;g__Thermomicrobium;s__Thermomicrobium roseum;
genomedb_acc GCF_000021685.1;
genomedb_target db:genomedb|GCF_000021685.1|WP_015922873.1 9 1119 evalue:0.0e+00 qcov:99.30 identity:58.20;
kegg_pathway_id 00500; 00052;
kegg_pathway_name Starch and sucrose metabolism; Galactose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-2622;
metacyc_pathway_name trehalose biosynthesis IV;;
metacyc_pathway_type Trehalose-biosynthesis;;
pfam_acc PF00128; PF11941; PF18085; PF16657;
pfam_desc Alpha amylase, catalytic domain; Domain of unknown function (DUF3459); Maltokinase N-terminal cap domain ; Maltogenic Amylase, C-terminal domain;
pfam_id Alpha-amylase; DUF3459; Mak_N_cap; Malt_amylase_C;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:7.9e-77 score:258.3 best_domain_score:256.9 name:Alpha-amylase; db:Pfam-A.hmm|PF11941.8 evalue:5.2e-05 score:22.7 best_domain_score:22.7 name:DUF3459; db:Pfam-A.hmm|PF18085.1 evalue:3.5e-10 score:40.0 best_domain_score:38.6 name:Mak_N_cap; db:Pfam-A.hmm|PF16657.5 evalue:6.7e-29 score:99.1 best_domain_score:98.2 name:Malt_amylase_C;
tigrfam_acc TIGR02456; TIGR02457;
tigrfam_desc trehalose synthase; putative maltokinase;
tigrfam_mainrole Energy metabolism; Energy metabolism;
tigrfam_name treS_nterm; TreS_Cterm;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides; Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02456 evalue:3e-276 score:916.2 best_domain_score:915.9 name:TIGR02456; db:TIGRFAMs.hmm|TIGR02457 evalue:2.7e-139 score:464.4 best_domain_score:464.1 name:TIGR02457;
52283 50256 CDS
ID metaerg.pl|09208
allec_ids 2.4.99.16;
allgo_ids GO:0003824; GO:0005975; GO:0004553; GO:0016758; GO:0030979;
allko_ids K16147;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Chloroflexia;o__Thermomicrobiales;f__Thermomicrobiaceae;g__Thermomicrobium;s__Thermomicrobium sp002898255;
genomedb_acc GCA_002898255.1;
genomedb_target db:genomedb|GCA_002898255.1|GBD20300.1 12 671 evalue:1.2e-225 qcov:97.80 identity:56.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF00128; PF11896;
pfam_desc Alpha amylase, catalytic domain; Domain of unknown function (DUF3416);
pfam_id Alpha-amylase; DUF3416;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:1.4e-07 score:30.6 best_domain_score:28.8 name:Alpha-amylase; db:Pfam-A.hmm|PF11896.8 evalue:2.5e-50 score:170.5 best_domain_score:170.5 name:DUF3416;
sprot_desc Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase;
sprot_id sp|Q8KAR6|GLGE_CHLTE;
sprot_target db:uniprot_sprot|sp|Q8KAR6|GLGE_CHLTE 12 668 evalue:3.4e-198 qcov:97.30 identity:50.50;
54185 52383 CDS
ID metaerg.pl|09209
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methyloterricola;s__Methyloterricola oryzae;
genomedb_acc GCF_000934725.1;
genomedb_target db:genomedb|GCF_000934725.1|WP_045223714.1 17 595 evalue:3.8e-93 qcov:96.50 identity:37.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
tm_num 10;
54185 52383 transmembrane_helix
ID metaerg.pl|09210
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology i52524-52583o52641-52709i52743-52802o52830-52898i52917-53012o53040-53108i53382-53450o53508-53567i53601-53669o54081-54149i;
54223 55194 CDS
ID metaerg.pl|09211
allec_ids 2.4.2.53;
allgo_ids GO:0016021; GO:0005886; GO:0016780; GO:0099621; GO:0036108; GO:0009245; GO:0009103; GO:0046677;
allko_ids K10012;
genomedb_OC d__Bacteria;p__Desulfobacterota_A;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfonatronaceae;g__Desulfonatronum;s__Desulfonatronum sp003046795;
genomedb_acc GCF_003046795.1;
genomedb_target db:genomedb|GCF_003046795.1|WP_107737310.1 6 323 evalue:5.2e-65 qcov:98.50 identity:46.10;
kegg_pathway_id 00520;
kegg_pathway_name Nucleotide sugars metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF00535;
pfam_desc Glycosyl transferase family 2;
pfam_id Glycos_transf_2;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:3e-15 score:55.7 best_domain_score:55.2 name:Glycos_transf_2;
sprot_desc Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;
sprot_id sp|B5XTK8|ARNC_KLEP3;
sprot_target db:uniprot_sprot|sp|B5XTK8|ARNC_KLEP3 4 290 evalue:8.8e-11 qcov:88.90 identity:26.00;
tm_num 2;
54223 55194 transmembrane_helix
ID metaerg.pl|09212
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology i54931-54999o55042-55110i;
55191 55934 CDS
ID metaerg.pl|09213
allgo_ids GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Elusimicrobiota;c__Elusimicrobia;o__Elusimicrobiales;f__UBA9959;g__UBA2231;s__UBA2231 sp003500765;
genomedb_acc GCA_003500765.1;
genomedb_target db:genomedb|GCA_003500765.1|HBE88831.1 7 240 evalue:2.5e-67 qcov:94.70 identity:56.00;
kegg_pathway_id 00626; 00450; 00380; 00340; 00150; 00350;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism; Tyrosine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF08241; PF08242; PF13489; PF13649;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:9e-11 score:41.5 best_domain_score:41.0 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:2.8e-11 score:43.3 best_domain_score:42.8 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:8.2e-11 score:41.2 best_domain_score:41.0 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.6e-10 score:40.8 best_domain_score:40.3 name:Methyltransf_25;
55898 57715 CDS
ID metaerg.pl|09214
genomedb_OC d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__GWA2-73-35;g__UBA12499;s__UBA12499 sp001788395;
genomedb_acc GCA_001788395.1;
genomedb_target db:genomedb|GCA_001788395.1|OGK79141.1 41 552 evalue:1.3e-45 qcov:84.60 identity:32.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF13231;
pfam_desc Dolichyl-phosphate-mannose-protein mannosyltransferase;
pfam_id PMT_2;
pfam_target db:Pfam-A.hmm|PF13231.6 evalue:5.1e-09 score:35.8 best_domain_score:35.8 name:PMT_2;
tm_num 7;
55898 57715 transmembrane_helix
ID metaerg.pl|09215
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology o56237-56296i56333-56401o56522-56581i56753-56821o56864-56917i56936-57004o57062-57130i;
58713 57721 CDS
ID metaerg.pl|09216
allec_ids 2.4.2.45;
allgo_ids GO:0016021; GO:0016765; GO:0045227; GO:0071555;
allko_ids K14136;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Azospirillum;s__Azospirillum halopraeferens;
genomedb_acc GCF_000429625.1;
genomedb_target db:genomedb|GCF_000429625.1|WP_084536699.1 21 329 evalue:7.7e-72 qcov:93.60 identity:50.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF01040;
pfam_desc UbiA prenyltransferase family;
pfam_id UbiA;
pfam_target db:Pfam-A.hmm|PF01040.18 evalue:7.8e-21 score:73.7 best_domain_score:73.0 name:UbiA;
sprot_desc Decaprenyl-phosphate phosphoribosyltransferase;
sprot_id sp|A0R626|DPPRS_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R626|DPPRS_MYCS2 34 330 evalue:4.5e-26 qcov:90.00 identity:30.90;
tm_num 7;
58713 57721 transmembrane_helix
ID metaerg.pl|09217
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology o57946-58014i58075-58143o58153-58221i58300-58368o58438-58506i58543-58611o58654-58707i;
60648 58879 CDS
ID metaerg.pl|09218
genomedb_OC d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__GWA2-73-35;g__40CM-68-15;s__40CM-68-15 sp001917585;
genomedb_acc GCA_001917585.1;
genomedb_target db:genomedb|GCA_001917585.1|OLB94773.1 17 474 evalue:2.5e-41 qcov:77.80 identity:33.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF13231;
pfam_desc Dolichyl-phosphate-mannose-protein mannosyltransferase;
pfam_id PMT_2;
pfam_target db:Pfam-A.hmm|PF13231.6 evalue:3.2e-09 score:36.4 best_domain_score:36.4 name:PMT_2;
tm_num 9;
60648 58879 transmembrane_helix
ID metaerg.pl|09219
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology i58915-58974o59125-59193i59254-59322o59365-59433i59494-59562o59653-59721i59755-59808o59821-59889i59950-60018o;
61454 60705 CDS
ID metaerg.pl|09220
allec_ids 1.-.-.-;
allgo_ids GO:0016491; GO:0017000;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Azospirillum;s__Azospirillum halopraeferens;
genomedb_acc GCF_000429625.1;
genomedb_target db:genomedb|GCF_000429625.1|WP_029009287.1 1 246 evalue:1.7e-71 qcov:98.80 identity:59.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987; PWY-2821; PWY-5826; PWY-4302; PWY-5271;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;;
pfam_acc PF00106; PF13561;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase;
pfam_id adh_short; adh_short_C2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:6.1e-27 score:93.6 best_domain_score:93.3 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:1.5e-17 score:63.2 best_domain_score:63.0 name:adh_short_C2;
sprot_desc Uncharacterized oxidoreductase in mprA 5'region;
sprot_id sp|P43168|YMP3_STRCH;
sprot_target db:uniprot_sprot|sp|P43168|YMP3_STRCH 2 246 evalue:1.7e-17 qcov:98.40 identity:30.40;
62791 61451 CDS
ID metaerg.pl|09221
allec_ids 1.1.98.3;
allgo_ids GO:0003885; GO:0016020; GO:0055114; GO:0042597; GO:0071949; GO:0045227; GO:0071555; GO:0046677;
allko_ids K16653;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Skermanella;s__Skermanella stibiiresistens;
genomedb_acc GCF_000576635.1;
genomedb_target db:genomedb|GCF_000576635.1|WP_037460856.1 1 445 evalue:1.8e-140 qcov:99.80 identity:57.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF04030; PF01565;
pfam_desc D-arabinono-1,4-lactone oxidase ; FAD binding domain;
pfam_id ALO; FAD_binding_4;
pfam_target db:Pfam-A.hmm|PF04030.14 evalue:5.4e-07 score:28.9 best_domain_score:28.4 name:ALO; db:Pfam-A.hmm|PF01565.23 evalue:2e-22 score:78.7 best_domain_score:77.7 name:FAD_binding_4;
sprot_desc Decaprenylphosphoryl-beta-D-ribose oxidase;
sprot_id sp|P9WJF0|DPRE1_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WJF0|DPRE1_MYCTO 8 444 evalue:1.3e-65 qcov:98.00 identity:35.40;
64012 62822 CDS
ID metaerg.pl|09222
allec_ids 1.1.1.284;
allgo_ids GO:0055114; GO:0005737; GO:0051903; GO:0008270;
allko_ids K13953; K07538; K00120; K00121; K00001;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Dactylosporangium;s__Dactylosporangium aurantiacum;
genomedb_acc GCF_000716715.1;
genomedb_target db:genomedb|GCF_000716715.1|WP_033359100.1 1 396 evalue:1.4e-168 qcov:100.00 identity:72.20;
kegg_pathway_id 00903; 00680; 00350; 00071; 00010; 00624; 00626; 00641; 00361; 00632; 00120;
kegg_pathway_name Limonene and pinene degradation; Methane metabolism; Tyrosine metabolism; Fatty acid metabolism; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; Naphthalene and anthracene degradation; 3-Chloroacrylic acid degradation; gamma-Hexachlorocyclohexane degradation; Benzoate degradation via CoA ligation; Bile acid biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-1882; PWY-1801;
metacyc_pathway_name superpathway of C1 compounds oxidation to CO2;; formaldehyde oxidation II (glutathione-dependent);;
metacyc_pathway_type C1-COMPOUNDS; Super-Pathways;; Formaldehyde-Oxidation;;
pfam_acc PF08240; PF13823; PF00107;
pfam_desc Alcohol dehydrogenase GroES-like domain; Alcohol dehydrogenase GroES-associated; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_N_assoc; ADH_zinc_N;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:1.1e-25 score:88.8 best_domain_score:88.0 name:ADH_N; db:Pfam-A.hmm|PF13823.6 evalue:1.9e-13 score:49.3 best_domain_score:48.2 name:ADH_N_assoc; db:Pfam-A.hmm|PF00107.26 evalue:1.3e-13 score:50.3 best_domain_score:41.1 name:ADH_zinc_N;
sprot_desc S-(hydroxymethyl)glutathione dehydrogenase;
sprot_id sp|P47734|FADH_METMR;
sprot_target db:uniprot_sprot|sp|P47734|FADH_METMR 1 396 evalue:1.7e-88 qcov:100.00 identity:44.30;
64207 65205 CDS
ID metaerg.pl|09223
allgo_ids GO:0003824; GO:0050662;
allko_ids K00022; K05711; K08683; K12420;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Fischerella;s__Fischerella muscicola_B;
genomedb_acc GCF_000317205.1;
genomedb_target db:genomedb|GCF_000317205.1|WP_026086097.1 1 293 evalue:2.9e-87 qcov:88.30 identity:60.00;
kegg_pathway_id 00062; 00650; 00360; 00071; 00281; 00280; 00310; 00380; 00930;
kegg_pathway_name Fatty acid elongation in mitochondria; Butanoate metabolism; Phenylalanine metabolism; Fatty acid metabolism; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; Tryptophan metabolism; Caprolactam degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF00106; PF13561; PF01370; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain;
pfam_id adh_short; adh_short_C2; Epimerase; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2.3e-53 score:179.8 best_domain_score:179.4 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:3.7e-38 score:130.6 best_domain_score:130.2 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:1.9e-06 score:26.8 best_domain_score:25.8 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:1.1e-13 score:50.8 best_domain_score:50.3 name:KR;
tm_num 1;
64207 65205 transmembrane_helix
ID metaerg.pl|09224
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology o65122-65175i;
65356 66648 CDS
ID metaerg.pl|09225
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Fischerella;s__Fischerella sp000517105;
genomedb_acc GCF_000517105.1;
genomedb_target db:genomedb|GCF_000517105.1|WP_026734062.1 8 428 evalue:1.6e-138 qcov:97.90 identity:53.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
67229 66690 CDS
ID metaerg.pl|09226
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
tm_num 4;
67229 66690 transmembrane_helix
ID metaerg.pl|09227
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology i66882-66938o66981-67049i67068-67121o67131-67199i;
67489 69213 CDS
ID metaerg.pl|09228
allec_ids 2.4.1.15;
allgo_ids GO:0003824; GO:0005992; GO:0005946; GO:0005737; GO:0005829; GO:0003825; GO:0034605; GO:0016311; GO:0030447; GO:0036180; GO:0036168; GO:0009405; GO:0090441; GO:0070413;
allko_ids K01087; K03692; K00697;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Acidiferrobacterales;f__Acidiferrobacteraceae;g__Acidiferrobacter;s__Acidiferrobacter sp003184265;
genomedb_acc GCF_003184265.1;
genomedb_target db:genomedb|GCF_003184265.1|WP_110136903.1 20 494 evalue:1.1e-137 qcov:82.80 identity:51.40;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id TRESYN-PWY;
metacyc_pathway_name trehalose biosynthesis I;;
metacyc_pathway_type Trehalose-biosynthesis;;
pfam_acc PF00982;
pfam_desc Glycosyltransferase family 20;
pfam_id Glyco_transf_20;
pfam_target db:Pfam-A.hmm|PF00982.21 evalue:7.5e-133 score:442.9 best_domain_score:442.6 name:Glyco_transf_20;
sprot_desc Alpha,alpha-trehalose-phosphate synthase [UDP-forming];
sprot_id sp|Q92410|TPS1_CANAL;
sprot_target db:uniprot_sprot|sp|Q92410|TPS1_CANAL 20 492 evalue:2.1e-87 qcov:82.40 identity:37.30;
69200 69595 CDS
ID metaerg.pl|09229
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__Nitrosomonas;s__Nitrosomonas sp900112825;
genomedb_acc GCF_900112825.1;
genomedb_target db:genomedb|GCF_900112825.1|WP_090718418.1 4 127 evalue:3.6e-41 qcov:94.70 identity:66.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF07100;
pfam_desc Anabaena sensory rhodopsin transducer;
pfam_id ASRT;
pfam_target db:Pfam-A.hmm|PF07100.11 evalue:9.8e-54 score:179.7 best_domain_score:179.6 name:ASRT;
69695 70561 CDS
ID metaerg.pl|09230
allec_ids 1.1.98.2; 1.-.-.-;
allgo_ids GO:0016705; GO:0055114; GO:0070967; GO:0052749; GO:0005975;
allko_ids K15510;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chamaesiphonaceae;g__Crinalium;s__Crinalium epipsammum;
genomedb_acc GCF_000317495.1;
genomedb_target db:genomedb|GCF_000317495.1|WP_015204972.1 1 285 evalue:1.5e-111 qcov:99.00 identity:64.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-5826; PWY-2821; PWY-5271; PWY-4302; PWYG-321; PWY-6113; PWY-5479; PWY-5987; PWY-5469;
metacyc_pathway_name hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; sesamin biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:2.5e-37 score:128.2 best_domain_score:128.0 name:Bac_luciferase;
sprot_desc F420-dependent glucose-6-phosphate dehydrogenase;
sprot_id sp|C8XBB4|FGD_NAKMY;
sprot_target db:uniprot_sprot|sp|C8XBB4|FGD_NAKMY 3 285 evalue:4.6e-35 qcov:98.30 identity:32.70;
tigrfam_acc TIGR03557; TIGR03885;
tigrfam_desc F420-dependent oxidoreductase, G6PDH family; probable non-F420 flavinoid oxidoreductase;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name F420_G6P_family; flavin_revert;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR03557 evalue:2.4e-77 score:259.3 best_domain_score:259.1 name:TIGR03557; db:TIGRFAMs.hmm|TIGR03885 evalue:3.9e-134 score:446.0 best_domain_score:445.8 name:TIGR03885;
70561 72429 CDS
ID metaerg.pl|09231
allec_ids 3.2.1.28;
allgo_ids GO:0004555; GO:0042301; GO:0005993;
allko_ids K01178; K22934;
genomedb_OC d__Archaea;p__Halobacterota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanocullaceae;g__Methanoculleus;s__Methanoculleus chikugoensis_A;
genomedb_acc GCF_900095385.1;
genomedb_target db:genomedb|GCF_900095385.1|WP_074369689.1 5 612 evalue:2.1e-187 qcov:97.70 identity:55.70;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY0-1466; PWY0-1182;
metacyc_pathway_name trehalose degradation VI (periplasmic);; trehalose degradation II (cytosolic);;
metacyc_pathway_type Trehalose-Degradation;; Trehalose-Degradation;;
pfam_acc PF00723;
pfam_desc Glycosyl hydrolases family 15;
pfam_id Glyco_hydro_15;
pfam_target db:Pfam-A.hmm|PF00723.21 evalue:1.3e-46 score:158.5 best_domain_score:151.8 name:Glyco_hydro_15;
sprot_desc Trehalase;
sprot_id sp|A0R0W9|TREH_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R0W9|TREH_MYCS2 1 607 evalue:1.8e-92 qcov:97.60 identity:33.10;
72916 72467 CDS
ID metaerg.pl|09232
genomedb_OC d__Archaea;p__Halobacterota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanocullaceae;g__Methanoculleus;s__Methanoculleus sp001896715;
genomedb_acc GCA_001896715.1;
genomedb_target db:genomedb|GCA_001896715.1|MPOY01000349.1_14 27 147 evalue:8.6e-39 qcov:81.20 identity:64.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF07100;
pfam_desc Anabaena sensory rhodopsin transducer;
pfam_id ASRT;
pfam_target db:Pfam-A.hmm|PF07100.11 evalue:3e-46 score:155.6 best_domain_score:155.4 name:ASRT;
74117 72897 CDS
ID metaerg.pl|09233
allgo_ids GO:0003885; GO:0016020; GO:0055114;
genomedb_OC d__Archaea;p__Halobacterota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanocullaceae;g__Methanoculleus;s__Methanoculleus sp001896715;
genomedb_acc GCA_001896715.1;
genomedb_target db:genomedb|GCA_001896715.1|MPOY01000349.1_13 5 394 evalue:2.8e-116 qcov:96.10 identity:52.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF04030; PF01565;
pfam_desc D-arabinono-1,4-lactone oxidase ; FAD binding domain;
pfam_id ALO; FAD_binding_4;
pfam_target db:Pfam-A.hmm|PF04030.14 evalue:4.4e-46 score:157.0 best_domain_score:126.0 name:ALO; db:Pfam-A.hmm|PF01565.23 evalue:1.8e-25 score:88.6 best_domain_score:88.0 name:FAD_binding_4;
tigrfam_acc TIGR01679;
tigrfam_desc FAD-linked oxidoreductase;
tigrfam_name bact_FAD_ox;
tigrfam_target db:TIGRFAMs.hmm|TIGR01679 evalue:6.1e-106 score:354.0 best_domain_score:213.7 name:TIGR01679;
74269 74739 CDS
ID metaerg.pl|09234
genomedb_OC d__Archaea;p__Halobacterota;c__Methanomicrobia;o__Methanomicrobiales;f__Methanocullaceae;g__Methanoculleus;s__Methanoculleus sp002506585;
genomedb_acc GCA_002506585.1;
genomedb_target db:genomedb|GCA_002506585.1|DAXW01000012.1_54 9 153 evalue:3.8e-37 qcov:92.90 identity:59.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
74800 75300 CDS
ID metaerg.pl|09235
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
76112 75348 CDS
ID metaerg.pl|09236
genomedb_OC d__Bacteria;p__Fibrobacterota;c__Chitinivibrionia;o__Chitinivibrionales;f__Chitinispirillaceae;g__Chitinispirillum;s__Chitinispirillum alkaliphilum;
genomedb_acc GCA_001045525.1;
genomedb_target db:genomedb|GCA_001045525.1|KMQ51277.1 5 250 evalue:2.7e-64 qcov:96.90 identity:52.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
tm_num 6;
76112 75348 transmembrane_helix
ID metaerg.pl|09237
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology o75384-75452i75489-75545o75558-75626i75684-75752o75780-75848i75909-75968o;
76159 76929 CDS
ID metaerg.pl|09238
allec_ids 3.1.3.27;
allgo_ids GO:0016021; GO:0005886; GO:0008962;
allko_ids K01096; K12978; K06153;
kegg_pathway_id 00550; 00564;
kegg_pathway_name Peptidoglycan biosynthesis; Glycerophospholipid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id PWY-5668; PHOSLIPSYN2-PWY; PWY4FS-7; PWY-5269; PHOSLIPSYN-PWY; PWY4FS-8;
metacyc_pathway_name cardiolipin biosynthesis I;; superpathway of phospholipid biosynthesis II (plants);; phosphatidylglycerol biosynthesis I (plastidic);; cardiolipin biosynthesis II;; superpathway of phospholipid biosynthesis I (bacteria);; phosphatidylglycerol biosynthesis II (non-plastidic);;
metacyc_pathway_type Cardiolipin-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylglycerolBiosynthesis; Super-Pathways;;
pfam_acc PF01569;
pfam_desc PAP2 superfamily;
pfam_id PAP2;
pfam_target db:Pfam-A.hmm|PF01569.21 evalue:1.6e-14 score:53.1 best_domain_score:53.1 name:PAP2;
sprot_desc Phosphatidylglycerophosphatase B;
sprot_id sp|O34349|PGPB_BACSU;
sprot_target db:uniprot_sprot|sp|O34349|PGPB_BACSU 54 247 evalue:8.0e-07 qcov:75.80 identity:30.40;
tm_num 6;
76159 76929 transmembrane_helix
ID metaerg.pl|09239
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology i76276-76344o76444-76512i76525-76584o76642-76710i76729-76797o76810-76878i;
77241 76966 CDS
ID metaerg.pl|09240
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylococcaceae;g__Methylocaldum;s__Methylocaldum sp002005105;
genomedb_acc GCF_002005105.1;
genomedb_target db:genomedb|GCF_002005105.1|WP_077729424.1 12 84 evalue:3.0e-10 qcov:80.20 identity:46.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
77761 77243 CDS
ID metaerg.pl|09241
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Hydrogenophilaceae;g__Thiobacillus;s__Thiobacillus sp001802655;
genomedb_acc GCA_001802655.1;
genomedb_target db:genomedb|GCA_001802655.1|OGU23308.1 1 171 evalue:3.5e-52 qcov:99.40 identity:65.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF11181;
pfam_desc Heat induced stress protein YflT;
pfam_id YflT;
pfam_target db:Pfam-A.hmm|PF11181.8 evalue:1.2e-09 score:37.9 best_domain_score:21.5 name:YflT;
tm_num 2;
77761 77243 transmembrane_helix
ID metaerg.pl|09242
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology i77420-77488o77531-77599i;
78387 78136 CDS
ID metaerg.pl|09243
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Chthoniobacterales;f__UBA10450;g__AV69;s__AV69 sp003244125;
genomedb_acc GCA_003244125.1;
genomedb_target db:genomedb|GCA_003244125.1|PZR75313.1 8 83 evalue:2.0e-24 qcov:91.60 identity:72.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
78511 79659 CDS
ID metaerg.pl|09244
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5704;f__UBA5704;g__UBA5704;s__UBA5704 sp002420005;
genomedb_acc GCA_002420005.1;
genomedb_target db:genomedb|GCA_002420005.1|DIHE01000094.1_14 34 382 evalue:7.5e-71 qcov:91.40 identity:41.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
sp YES;
78511 78678 signal_peptide
ID metaerg.pl|09245
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
81008 79629 CDS
ID metaerg.pl|09246
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085; GO:0016021; GO:0042910;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-544;s__SZUA-544 sp003251175;
genomedb_acc GCA_003251175.1;
genomedb_target db:genomedb|GCA_003251175.1|QKHC01000113.1_10 1 451 evalue:2.9e-178 qcov:98.30 identity:71.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF01554; PF14667;
pfam_desc MatE; Polysaccharide biosynthesis C-terminal domain;
pfam_id MatE; Polysacc_synt_C;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:2.5e-42 score:143.5 best_domain_score:84.2 name:MatE; db:Pfam-A.hmm|PF14667.6 evalue:1.7e-08 score:33.9 best_domain_score:22.4 name:Polysacc_synt_C;
sprot_desc FAD transporter;
sprot_id sp|Q8EIX5|BFE_SHEON;
sprot_target db:uniprot_sprot|sp|Q8EIX5|BFE_SHEON 40 411 evalue:5.8e-08 qcov:81.00 identity:22.60;
tigrfam_acc TIGR00797;
tigrfam_desc MATE efflux family protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name matE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00797 evalue:6.8e-56 score:189.0 best_domain_score:188.7 name:TIGR00797;
tm_num 12;
81008 79629 transmembrane_helix
ID metaerg.pl|09247
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology i79665-79733o79770-79838i79875-79943o80001-80069i80103-80168o80196-80264i80325-80393o80451-80519i80580-80648o80691-80759i80793-80861o80874-80927i;
83333 81081 CDS
ID metaerg.pl|09248
allec_ids 1.1.1.42;
allgo_ids GO:0004450; GO:0006099; GO:0055114; GO:0005737; GO:0046872; GO:0006097;
allko_ids K00031;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thioflavicoccus;s__Thioflavicoccus mobilis;
genomedb_acc GCF_000327045.1;
genomedb_target db:genomedb|GCF_000327045.1|WP_015279266.1 7 743 evalue:5.2e-302 qcov:98.30 identity:70.30;
kegg_pathway_id 00720; 00480; 00020;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Glutathione metabolism; Citrate cycle (TCA cycle);
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id REDCITCYC; TCA; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5913; P105-PWY; PWY-6549; TCA-GLYOX-BYPASS; ANARESP1-PWY; FERMENTATION-PWY;
metacyc_pathway_name TCA cycle VIII (Helicobacter);; TCA cycle I (prokaryotic);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; partial TCA cycle (obligate autotrophs);; TCA cycle IV (2-oxoglutarate decarboxylase);; L-glutamine biosynthesis III;; superpathway of glyoxylate bypass and TCA;; ; mixed acid fermentation;;
metacyc_pathway_type TCA-VARIANTS;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; TCA-VARIANTS;; TCA-VARIANTS;; GLUTAMINE-SYN;; Super-Pathways; TCA-VARIANTS;; ; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;;
pfam_acc PF03971;
pfam_desc Monomeric isocitrate dehydrogenase;
pfam_id IDH;
pfam_target db:Pfam-A.hmm|PF03971.14 evalue:0 score:1191.7 best_domain_score:1191.5 name:IDH;
sprot_desc Isocitrate dehydrogenase [NADP];
sprot_id sp|P16100|IDH_AZOVI;
sprot_target db:uniprot_sprot|sp|P16100|IDH_AZOVI 3 747 evalue:5.4e-261 qcov:99.30 identity:60.40;
tigrfam_acc TIGR00178;
tigrfam_desc isocitrate dehydrogenase, NADP-dependent;
tigrfam_mainrole Energy metabolism;
tigrfam_name monomer_idh;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR00178 evalue:0 score:1178.8 best_domain_score:1178.6 name:TIGR00178;
84342 83449 CDS
ID metaerg.pl|09249
allec_ids 2.5.1.47;
allgo_ids GO:0005737; GO:0004124; GO:0080146; GO:0030170; GO:0006535;
allko_ids K01738; K10150; K12339; K01754; K13034; K01733; K01697;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Marinospirillum;s__Marinospirillum alkaliphilum;
genomedb_acc GCF_900119735.1;
genomedb_target db:genomedb|GCF_900119735.1|WP_072324363.1 3 296 evalue:4.3e-122 qcov:99.00 identity:74.80;
kegg_pathway_id 00290; 00920; 00750; 00271; 00450; 00272; 00260;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Sulfur metabolism; Vitamin B6 metabolism; Methionine metabolism; Selenoamino acid metabolism; Cysteine metabolism; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
metacyc_pathway_id CYSTSYN-PWY; SULFATE-CYS-PWY;
metacyc_pathway_name L-cysteine biosynthesis I;; superpathway of sulfate assimilation and cysteine biosynthesis;;
metacyc_pathway_type CYSTEINE-SYN;; Sulfur-Metabolism; Super-Pathways;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:1.1e-65 score:221.2 best_domain_score:219.8 name:PALP;
sprot_desc Cysteine synthase B;
sprot_id sp|Q9I526|CYSM_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I526|CYSM_PSEAE 3 295 evalue:5.8e-118 qcov:98.70 identity:72.00;
tigrfam_acc TIGR01136; TIGR01138;
tigrfam_desc cysteine synthase; cysteine synthase B;
tigrfam_mainrole Amino acid biosynthesis; Amino acid biosynthesis;
tigrfam_name cysKM; cysM;
tigrfam_sub1role Serine family; Serine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01136 evalue:3.1e-113 score:377.2 best_domain_score:377.1 name:TIGR01136; db:TIGRFAMs.hmm|TIGR01138 evalue:2.5e-141 score:469.5 best_domain_score:469.3 name:TIGR01138;
84830 84357 CDS
ID metaerg.pl|09250
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
tm_num 3;
84830 84357 transmembrane_helix
ID metaerg.pl|09251
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
topology o84366-84425i84444-84512o84576-84644i;
84924 86570 CDS
ID metaerg.pl|09252
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter halophilus;
genomedb_acc GCF_001715195.1;
genomedb_target db:genomedb|GCF_001715195.1|WP_069130384.1 19 549 evalue:6.3e-188 qcov:96.70 identity:60.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
pfam_acc PF16313; PF17148; PF17162; PF13583;
pfam_desc Met-zincin; Domain of unknown function (DUF5117); Domain of unknown function (DUF5118); Metallo-peptidase family M12B Reprolysin-like;
pfam_id DUF4953; DUF5117; DUF5118; Reprolysin_4;
pfam_target db:Pfam-A.hmm|PF16313.5 evalue:1.3e-56 score:191.4 best_domain_score:191.0 name:DUF4953; db:Pfam-A.hmm|PF17148.4 evalue:6.9e-55 score:185.1 best_domain_score:184.6 name:DUF5117; db:Pfam-A.hmm|PF17162.4 evalue:9.4e-10 score:37.4 best_domain_score:36.6 name:DUF5118; db:Pfam-A.hmm|PF13583.6 evalue:1.6e-05 score:23.9 best_domain_score:22.3 name:Reprolysin_4;
sp YES;
84924 84965 lipoprotein_signal_peptide
ID metaerg.pl|09253
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.282478; 1.18405; 40.3713; 0.0558892; 41.8937;
>Feature NODE_65_length_85961_cov_12.8165
1 792 CDS
ID metaerg.pl|09254
allgo_ids GO:0006813;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796890.1 1 262 evalue:5.5e-121 qcov:99.60 identity:84.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF02254;
pfam_desc TrkA-N domain;
pfam_id TrkA_N;
pfam_target db:Pfam-A.hmm|PF02254.18 evalue:1.2e-15 score:57.0 best_domain_score:56.4 name:TrkA_N;
tm_num 3;
1 792 transmembrane_helix
ID metaerg.pl|09255
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i4-72o100-168i187-246o;
862 2685 CDS
ID metaerg.pl|09256
allgo_ids GO:0016021; GO:0055085; GO:0005886; GO:0008324; GO:0006813;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479358.1 2 607 evalue:2.8e-277 qcov:99.80 identity:84.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF03600; PF00939; PF02080;
pfam_desc Citrate transporter; Sodium:sulfate symporter transmembrane region; TrkA-C domain;
pfam_id CitMHS; Na_sulph_symp; TrkA_C;
pfam_target db:Pfam-A.hmm|PF03600.16 evalue:7.2e-67 score:224.9 best_domain_score:172.2 name:CitMHS; db:Pfam-A.hmm|PF00939.19 evalue:1.7e-21 score:76.1 best_domain_score:53.5 name:Na_sulph_symp; db:Pfam-A.hmm|PF02080.21 evalue:3e-25 score:87.1 best_domain_score:52.7 name:TrkA_C;
sprot_desc Uncharacterized transporter YfbS;
sprot_id sp|P0AFU3|YFBS_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFU3|YFBS_ECO57 1 607 evalue:5.0e-148 qcov:100.00 identity:48.00;
tm_num 12;
862 2685 transmembrane_helix
ID metaerg.pl|09257
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o874-927i946-1014o1030-1089i1150-1218o1276-1344i1378-1446o2140-2208i2245-2313o2371-2424i2437-2505o2518-2586i2605-2673o;
4349 2748 CDS
ID metaerg.pl|09258
allec_ids 6.2.1.3;
allgo_ids GO:0003824; GO:0005886; GO:0003996; GO:0005524; GO:0102391; GO:0004467; GO:0006633;
allko_ids K01895; K01784; K01909; K01904; K01897; K01652; K00666; K01776; K00143; K03367; K02364; K00992; K01912; K01779; K01913; K01586; K05939;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068290389.1 12 525 evalue:3.1e-248 qcov:96.40 identity:81.10;
kegg_pathway_id 00252; 00251; 00473; 00360; 00071; 00061; 00660; 00471; 00052; 00290; 00564; 00281; 00310; 00010; 00930; 01053; 00770; 00903; 00620; 00300; 00960; 00650; 00640; 00720; 00520; 00632; 00940;
kegg_pathway_name Alanine and aspartate metabolism; Glutamate metabolism; D-Alanine metabolism; Phenylalanine metabolism; Fatty acid metabolism; Fatty acid biosynthesis; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Galactose metabolism; Valine, leucine and isoleucine biosynthesis; Glycerophospholipid metabolism; Geraniol degradation; Lysine degradation; Glycolysis / Gluconeogenesis; Caprolactam degradation; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Limonene and pinene degradation; Pyruvate metabolism; Lysine biosynthesis; Alkaloid biosynthesis II; Butanoate metabolism; Propanoate metabolism; Reductive carboxylate cycle (CO2 fixation); Nucleotide sugars metabolism; Benzoate degradation via CoA ligation; Phenylpropanoid biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-561; PWY-6000; PWY-6001; PWY-5995; PWY-5136; P221-PWY; PWY-5143; PWY-5972; FAO-PWY;
metacyc_pathway_name superpathway of glyoxylate cycle and fatty acid degradation;; γ-linolenate biosynthesis II (animals);; linoleate biosynthesis II (animals);; linoleate biosynthesis I (plants);; fatty acid β-oxidation II (peroxisome);; octane oxidation;; long-chain fatty acid activation;; stearate biosynthesis I (animals and fungi);; fatty acid β-oxidation I;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Gamma-linolenate-Biosynthesis;; Linoleate-Biosynthesis;; Linoleate-Biosynthesis;; Fatty-Acid-Degradation;; Other-Degradation;; Activation; Lipid-Biosynthesis;; Stearate-Biosynthesis;; Fatty-Acid-Degradation;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:7.9e-105 score:350.1 best_domain_score:349.7 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:2.2e-22 score:79.1 best_domain_score:77.7 name:AMP-binding_C;
sprot_desc Long-chain-fatty-acid--CoA ligase FadD13;
sprot_id sp|P9WQ36|FAC13_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WQ36|FAC13_MYCTO 45 525 evalue:5.1e-64 qcov:90.20 identity:34.30;
5723 4389 CDS
ID metaerg.pl|09259
allgo_ids GO:0016021; GO:0005886; GO:0022857; GO:0008643;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCO07;s__HLUCCO07 sp001314705;
genomedb_acc GCA_001314705.1;
genomedb_target db:genomedb|GCA_001314705.1|KPP81880.1 10 440 evalue:2.4e-169 qcov:97.10 identity:73.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:2.6e-75 score:253.1 best_domain_score:252.9 name:DctM;
sprot_desc Sialic acid TRAP transporter large permease protein SiaM;
sprot_id sp|Q9KR66|SIAM_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KR66|SIAM_VIBCH 24 439 evalue:4.6e-34 qcov:93.70 identity:29.40;
tm_num 12;
5723 4389 transmembrane_helix
ID metaerg.pl|09260
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o4416-4469i4482-4550o4578-4646i4683-4751o4848-4916i4935-5003o5085-5144i5163-5222o5250-5318i5379-5447o5505-5573i5634-5702o;
6306 5716 CDS
ID metaerg.pl|09261
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068290386.1 19 196 evalue:1.6e-48 qcov:90.80 identity:59.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:8.9e-25 score:86.4 best_domain_score:86.4 name:DctQ;
tm_num 4;
6306 5716 transmembrane_helix
ID metaerg.pl|09262
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i5788-5856o5899-5967i6034-6102o6160-6228i;
7595 6432 CDS
ID metaerg.pl|09263
allgo_ids GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068290385.1 6 386 evalue:2.9e-118 qcov:98.40 identity:57.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:2.6e-14 score:52.5 best_domain_score:51.9 name:DctP;
sp YES;
tm_num 1;
6432 6524 signal_peptide
ID metaerg.pl|09264
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
7595 6432 transmembrane_helix
ID metaerg.pl|09265
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i6465-6533o;
8512 7739 CDS
ID metaerg.pl|09266
allec_ids 4.2.1.17;
allgo_ids GO:0003824; GO:0004300; GO:0006631;
allko_ids K01692; K00022; K01782; K07516; K15016; K13767; K07514; K10527; K01825; K07515; K15866;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter sp000526275;
genomedb_acc GCF_000526275.1;
genomedb_target db:genomedb|GCF_000526275.1|WP_024809708.1 1 256 evalue:9.5e-102 qcov:99.60 identity:77.30;
kegg_pathway_id 00632; 00930; 00380; 00310; 00281; 00280; 00071; 00410; 00592; 00650; 00640; 00903; 00062; 01040;
kegg_pathway_name Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Fatty acid metabolism; beta-Alanine metabolism; alpha-Linolenic acid metabolism; Butanoate metabolism; Propanoate metabolism; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-6435; PWY-561; P3-PWY; PWY-5138; VALDEG-PWY; FAO-PWY; ILEUDEG-PWY; PWY-5136;
metacyc_pathway_name 4-hydroxybenzoate biosynthesis III (plants);; superpathway of glyoxylate cycle and fatty acid degradation;; gallate degradation III (anaerobic);; unsaturated, even numbered fatty acid β-oxidation;; L-valine degradation I;; fatty acid β-oxidation I;; L-isoleucine degradation I;; fatty acid β-oxidation II (peroxisome);;
metacyc_pathway_type 4-Hydroxybenzoate-Biosynthesis;; Energy-Metabolism; Super-Pathways;; GALLATE-DEG;; Fatty-Acid-Degradation;; VALINE-DEG;; Fatty-Acid-Degradation;; ISOLEUCINE-DEG;; Fatty-Acid-Degradation;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:6.1e-55 score:185.5 best_domain_score:185.3 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:9.3e-25 score:87.0 best_domain_score:78.9 name:ECH_2;
sprot_desc Probable enoyl-CoA hydratase;
sprot_id sp|P24162|ECHH_RHOCB;
sprot_target db:uniprot_sprot|sp|P24162|ECHH_RHOCB 5 256 evalue:1.4e-38 qcov:98.10 identity:39.70;
9399 8509 CDS
ID metaerg.pl|09267
allec_ids 4.2.1.17;
allgo_ids GO:0003824; GO:0005777; GO:0004300; GO:0009405;
allko_ids K15016; K13767; K01692; K00022; K07516; K01782; K01825; K10527; K07515; K07514;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter sp000526275;
genomedb_acc GCF_000526275.1;
genomedb_target db:genomedb|GCF_000526275.1|WP_024809709.1 1 290 evalue:2.8e-134 qcov:98.00 identity:84.10;
kegg_pathway_id 01040; 00062; 00903; 00640; 00650; 00592; 00410; 00071; 00281; 00280; 00310; 00380; 00632; 00930;
kegg_pathway_name Biosynthesis of unsaturated fatty acids; Fatty acid elongation in mitochondria; Limonene and pinene degradation; Propanoate metabolism; Butanoate metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; Tryptophan metabolism; Benzoate degradation via CoA ligation; Caprolactam degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id P3-PWY; PWY-5138; VALDEG-PWY; PWY-6435; PWY-561; PWY-5136; FAO-PWY; ILEUDEG-PWY;
metacyc_pathway_name gallate degradation III (anaerobic);; unsaturated, even numbered fatty acid β-oxidation;; L-valine degradation I;; 4-hydroxybenzoate biosynthesis III (plants);; superpathway of glyoxylate cycle and fatty acid degradation;; fatty acid β-oxidation II (peroxisome);; fatty acid β-oxidation I;; L-isoleucine degradation I;;
metacyc_pathway_type GALLATE-DEG;; Fatty-Acid-Degradation;; VALINE-DEG;; 4-Hydroxybenzoate-Biosynthesis;; Energy-Metabolism; Super-Pathways;; Fatty-Acid-Degradation;; Fatty-Acid-Degradation;; ISOLEUCINE-DEG;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:1.6e-48 score:164.4 best_domain_score:162.6 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:8.8e-26 score:90.4 best_domain_score:81.3 name:ECH_2;
sprot_desc Enoyl-CoA hydratase AFT3-1;
sprot_id sp|Q96VB3|AFT31_ALTAL;
sprot_target db:uniprot_sprot|sp|Q96VB3|AFT31_ALTAL 12 270 evalue:4.5e-46 qcov:87.50 identity:42.70;
10175 9396 CDS
ID metaerg.pl|09268
allgo_ids GO:0003700; GO:0006355;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter sp000526275;
genomedb_acc GCF_000526275.1;
genomedb_target db:genomedb|GCF_000526275.1|WP_024809710.1 13 246 evalue:3.4e-99 qcov:90.30 identity:78.60;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:2.2e-20 score:72.6 best_domain_score:71.6 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:3e-20 score:70.8 best_domain_score:69.8 name:GntR;
10439 10888 CDS
ID metaerg.pl|09269
allgo_ids GO:0009877;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Niveispirillum;s__Niveispirillum cyanobacteriorum;
genomedb_acc GCF_002868735.1;
genomedb_target db:genomedb|GCF_002868735.1|WP_102112498.1 10 147 evalue:2.8e-37 qcov:92.60 identity:57.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF01575;
pfam_desc MaoC like domain;
pfam_id MaoC_dehydratas;
pfam_target db:Pfam-A.hmm|PF01575.19 evalue:2.1e-22 score:78.2 best_domain_score:77.8 name:MaoC_dehydratas;
sprot_desc Nodulation protein N;
sprot_id sp|P25200|NODN_RHIME;
sprot_target db:uniprot_sprot|sp|P25200|NODN_RHIME 10 143 evalue:1.0e-30 qcov:89.90 identity:49.60;
10958 12547 CDS
ID metaerg.pl|09270
allec_ids 2.3.2.2;
allgo_ids GO:0036374; GO:0102953; GO:0103068; GO:0006751;
allko_ids K00681;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08520.1 1 529 evalue:3.7e-233 qcov:100.00 identity:77.10;
kegg_pathway_id 00590; 00450; 00480; 00430; 00460;
kegg_pathway_name Arachidonic acid metabolism; Selenoamino acid metabolism; Glutathione metabolism; Taurine and hypotaurine metabolism; Cyanoamino acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-4041; PWY-5826;
metacyc_pathway_name γ-glutamyl cycle;; hypoglycin biosynthesis;;
metacyc_pathway_type Reductants; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;;
pfam_acc PF01019;
pfam_desc Gamma-glutamyltranspeptidase;
pfam_id G_glu_transpept;
pfam_target db:Pfam-A.hmm|PF01019.21 evalue:1.1e-129 score:432.7 best_domain_score:432.5 name:G_glu_transpept;
sprot_desc Glutathione hydrolase-like YwrD proenzyme;
sprot_id sp|O05218|YWRD_BACSU;
sprot_target db:uniprot_sprot|sp|O05218|YWRD_BACSU 11 528 evalue:3.3e-71 qcov:97.90 identity:34.90;
13412 12630 CDS
ID metaerg.pl|09271
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudoroseicyclus;s__Pseudoroseicyclus aestuarii;
genomedb_acc GCF_003217255.1;
genomedb_target db:genomedb|GCF_003217255.1|WP_110813681.1 4 257 evalue:4.9e-82 qcov:97.70 identity:68.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF01925;
pfam_desc Sulfite exporter TauE/SafE;
pfam_id TauE;
pfam_target db:Pfam-A.hmm|PF01925.19 evalue:8.8e-25 score:86.9 best_domain_score:86.7 name:TauE;
tm_num 8;
13412 12630 transmembrane_helix
ID metaerg.pl|09272
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o12672-12740i12774-12842o12870-12923i12942-13001o13044-13103i13161-13229o13239-13307i13326-13394o;
13518 13805 CDS
ID metaerg.pl|09273
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Maritimibacter;s__Maritimibacter sp003520545;
genomedb_acc GCA_003520545.1;
genomedb_target db:genomedb|GCA_003520545.1|HBZ44461.1 1 95 evalue:1.8e-18 qcov:100.00 identity:53.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
14703 13978 CDS
ID metaerg.pl|09274
allgo_ids GO:0004298; GO:0005839; GO:0051603;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07860.1 1 241 evalue:1.4e-102 qcov:100.00 identity:81.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00227;
pfam_desc Proteasome subunit;
pfam_id Proteasome;
pfam_target db:Pfam-A.hmm|PF00227.26 evalue:3.6e-06 score:25.8 best_domain_score:23.9 name:Proteasome;
sp YES;
13978 14046 signal_peptide
ID metaerg.pl|09275
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
15639 14833 CDS
ID metaerg.pl|09276
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter_A;s__Gemmobacter_A nectariphilus;
genomedb_acc GCF_000429765.1;
genomedb_target db:genomedb|GCF_000429765.1|WP_028030509.1 1 267 evalue:1.9e-100 qcov:99.60 identity:68.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF08379; PF01841;
pfam_desc Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily;
pfam_id Bact_transglu_N; Transglut_core;
pfam_target db:Pfam-A.hmm|PF08379.10 evalue:1.1e-15 score:57.5 best_domain_score:56.2 name:Bact_transglu_N; db:Pfam-A.hmm|PF01841.19 evalue:2e-23 score:82.2 best_domain_score:81.5 name:Transglut_core;
16589 15636 CDS
ID metaerg.pl|09277
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07862.1 1 317 evalue:6.3e-140 qcov:100.00 identity:77.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF04168;
pfam_desc A predicted alpha-helical domain with a conserved ER motif.;
pfam_id Alpha-E;
pfam_target db:Pfam-A.hmm|PF04168.12 evalue:2.1e-86 score:289.6 best_domain_score:289.4 name:Alpha-E;
18174 16762 CDS
ID metaerg.pl|09278
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068297239.1 1 470 evalue:1.8e-244 qcov:100.00 identity:86.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF04174; PF14403;
pfam_desc A circularly permuted ATPgrasp ; Circularly permuted ATP-grasp type 2;
pfam_id CP_ATPgrasp_1; CP_ATPgrasp_2;
pfam_target db:Pfam-A.hmm|PF04174.13 evalue:1.9e-151 score:503.0 best_domain_score:502.2 name:CP_ATPgrasp_1; db:Pfam-A.hmm|PF14403.6 evalue:1.8e-162 score:539.8 best_domain_score:539.5 name:CP_ATPgrasp_2;
sprot_desc hypothetical protein;
sprot_id sp|Q55587|Y335_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55587|Y335_SYNY3 4 468 evalue:1.7e-140 qcov:98.90 identity:53.10;
18382 18903 CDS
ID metaerg.pl|09279
allec_ids 1.11.1.9;
allgo_ids GO:0004602; GO:0006979; GO:0055114; GO:0042597;
allko_ids K00432;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479052.1 11 172 evalue:7.6e-63 qcov:93.60 identity:71.00;
kegg_pathway_id 00590; 00480;
kegg_pathway_name Arachidonic acid metabolism; Glutathione metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-4081;
metacyc_pathway_name glutathione-peroxide redox reactions;;
metacyc_pathway_type Reductants;;
pfam_acc PF00255;
pfam_desc Glutathione peroxidase;
pfam_id GSHPx;
pfam_target db:Pfam-A.hmm|PF00255.19 evalue:7e-24 score:82.7 best_domain_score:82.3 name:GSHPx;
sp YES;
sprot_desc Glutathione peroxidase;
sprot_id sp|O08368|GPWA_PSEWI;
sprot_target db:uniprot_sprot|sp|O08368|GPWA_PSEWI 30 160 evalue:7.0e-23 qcov:75.70 identity:38.90;
tm_num 1;
18382 18447 signal_peptide
ID metaerg.pl|09280
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
18382 18903 transmembrane_helix
ID metaerg.pl|09281
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i18394-18462o;
18908 20089 CDS
ID metaerg.pl|09282
allec_ids 3.5.1.98;
allgo_ids GO:0009941; GO:0000118; GO:0005730; GO:0005634; GO:0004407; GO:0032041; GO:0009793; GO:0016458; GO:0016575; GO:0070932; GO:0070933; GO:0045944; GO:0016441; GO:0009737; GO:0009651; GO:0010431; GO:0010228;
allko_ids K06067;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479051.1 4 369 evalue:4.7e-145 qcov:93.10 identity:68.60;
kegg_pathway_id 04110;
kegg_pathway_name Cell cycle;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00850;
pfam_desc Histone deacetylase domain;
pfam_id Hist_deacetyl;
pfam_target db:Pfam-A.hmm|PF00850.19 evalue:3.4e-58 score:196.8 best_domain_score:196.5 name:Hist_deacetyl;
sprot_desc Histone deacetylase 6;
sprot_id sp|Q9FML2|HDA6_ARATH;
sprot_target db:uniprot_sprot|sp|Q9FML2|HDA6_ARATH 17 317 evalue:1.5e-33 qcov:76.60 identity:34.50;
20175 20690 CDS
ID metaerg.pl|09283
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
sp YES;
20175 20297 signal_peptide
ID metaerg.pl|09284
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
21170 20706 CDS
ID metaerg.pl|09285
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
22573 21299 CDS
ID metaerg.pl|09286
allec_ids 4.2.1.11;
allgo_ids GO:0009986; GO:0005576; GO:0000015; GO:0000287; GO:0004634; GO:0006096;
allko_ids K01689;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06368.1 1 424 evalue:8.6e-209 qcov:100.00 identity:88.00;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAGLYCOLYSIS-PWY; PWY-5464; ANAEROFRUCAT-PWY; PWY-1042; PWY-3801; PWY-5723; P441-PWY; PWY-1622; PWY-6142; P341-PWY; P461-PWY; PWY-5484; NPGLUCAT-PWY; P124-PWY; GLUCONEO-PWY; PWY-2221; ANARESP1-PWY; GLYCOLYSIS; P122-PWY; PWY-6146; GLYCOLYSIS-E-D;
metacyc_pathway_name superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; homolactic fermentation;; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);; Rubisco shunt;; superpathway of N-acetylneuraminate degradation;; formaldehyde assimilation I (serine pathway);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; glycolysis V (Pyrococcus);; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; Entner-Doudoroff pathway II (non-phosphorylative);; Bifidobacterium shunt;; gluconeogenesis I;; Entner-Doudoroff pathway III (semi-phosphorylative);; ; glycolysis I (from glucose 6-phosphate);; heterolactic fermentation;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of glycolysis and the Entner-Doudoroff pathway;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Lactate; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Energy-Metabolism;; CARBOXYLATES-DEG; Super-Pathways;; Formaldehyde-Assimilation;; Gluconeogenesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Entner-Duodoroff-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Gluconeogenesis;; Entner-Duodoroff-Pathways;; ; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00113; PF03952; PF13378;
pfam_desc Enolase, C-terminal TIM barrel domain; Enolase, N-terminal domain; Enolase C-terminal domain-like;
pfam_id Enolase_C; Enolase_N; MR_MLE_C;
pfam_target db:Pfam-A.hmm|PF00113.22 evalue:3.4e-127 score:423.0 best_domain_score:422.7 name:Enolase_C; db:Pfam-A.hmm|PF03952.16 evalue:4.3e-59 score:197.6 best_domain_score:197.0 name:Enolase_N; db:Pfam-A.hmm|PF13378.6 evalue:8.8e-08 score:31.2 best_domain_score:30.5 name:MR_MLE_C;
sprot_desc Enolase;
sprot_id sp|Q5LQL4|ENO_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LQL4|ENO_RUEPO 1 424 evalue:1.0e-200 qcov:100.00 identity:83.50;
tigrfam_acc TIGR01060;
tigrfam_desc phosphopyruvate hydratase;
tigrfam_mainrole Energy metabolism;
tigrfam_name eno;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01060 evalue:1.9e-202 score:671.7 best_domain_score:671.5 name:TIGR01060;
22762 23763 CDS
ID metaerg.pl|09287
allgo_ids GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245796.1 7 318 evalue:1.2e-64 qcov:93.70 identity:43.30;
kegg_pathway_id 00350; 00150; 00380; 00340; 00626; 00450;
kegg_pathway_name Tyrosine metabolism; Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism; Naphthalene and anthracene degradation; Selenoamino acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF08241; PF08242; PF00891; PF13489; PF13649; PF13847; PF02390; PF05401;
pfam_desc Methyltransferase domain; Methyltransferase domain; O-methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Putative methyltransferase ; Nodulation protein S (NodS);
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_2; Methyltransf_23; Methyltransf_25; Methyltransf_31; Methyltransf_4; NodS;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:1.7e-16 score:59.9 best_domain_score:58.9 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.6e-14 score:53.7 best_domain_score:53.0 name:Methyltransf_12; db:Pfam-A.hmm|PF00891.18 evalue:1.2e-05 score:23.9 best_domain_score:23.3 name:Methyltransf_2; db:Pfam-A.hmm|PF13489.6 evalue:1.2e-11 score:43.9 best_domain_score:43.3 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:4.6e-18 score:65.0 best_domain_score:63.7 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:3.6e-18 score:65.1 best_domain_score:64.4 name:Methyltransf_31; db:Pfam-A.hmm|PF02390.17 evalue:3.6e-06 score:25.8 best_domain_score:24.7 name:Methyltransf_4; db:Pfam-A.hmm|PF05401.11 evalue:2.1e-05 score:23.4 best_domain_score:22.9 name:NodS;
24589 23729 CDS
ID metaerg.pl|09288
allgo_ids GO:0016020; GO:0016021; GO:0005886; GO:0006865;
allko_ids K15270;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06367.1 1 286 evalue:2.4e-98 qcov:100.00 identity:68.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.1e-18 score:67.0 best_domain_score:41.5 name:EamA;
sp YES;
sprot_desc S-adenosylmethionine uptake transporter;
sprot_id sp|Q9ZE70|SAM_RICPR;
sprot_target db:uniprot_sprot|sp|Q9ZE70|SAM_RICPR 70 281 evalue:2.6e-14 qcov:74.10 identity:26.40;
tm_num 9;
23729 23782 signal_peptide
ID metaerg.pl|09289
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
24589 23729 transmembrane_helix
ID metaerg.pl|09290
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o23819-23887i23948-24007o24017-24070i24095-24154o24164-24223i24260-24328o24341-24409i24443-24496o24509-24565i;
24827 25801 CDS
ID metaerg.pl|09291
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06364.1 25 324 evalue:9.4e-107 qcov:92.60 identity:68.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:6.6e-36 score:122.7 best_domain_score:73.0 name:EamA;
tm_num 10;
24827 25801 transmembrane_helix
ID metaerg.pl|09292
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i24932-24985o25013-25066i25100-25168o25181-25249i25268-25327o25370-25438i25472-25525o25568-25636i25655-25714o25724-25783i;
26555 25812 CDS
ID metaerg.pl|09293
allec_ids 6.1.1.7;
allgo_ids GO:0000166; GO:0004813; GO:0005524; GO:0006419; GO:0005737; GO:0000049; GO:0008270;
allko_ids K01872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodosalinus;s__Rhodosalinus sp003298775;
genomedb_acc GCA_003298775.1;
genomedb_target db:genomedb|GCA_003298775.1|RBI85812.1 6 246 evalue:2.6e-88 qcov:97.60 identity:70.10;
kegg_pathway_id 00252; 00970;
kegg_pathway_name Alanine and aspartate metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF01411; PF07973;
pfam_desc tRNA synthetases class II (A); Threonyl and Alanyl tRNA synthetase second additional domain;
pfam_id tRNA-synt_2c; tRNA_SAD;
pfam_target db:Pfam-A.hmm|PF01411.19 evalue:1.1e-08 score:33.3 best_domain_score:33.0 name:tRNA-synt_2c; db:Pfam-A.hmm|PF07973.14 evalue:3.7e-12 score:45.4 best_domain_score:44.7 name:tRNA_SAD;
sprot_desc Alanine--tRNA ligase;
sprot_id sp|A8MBI2|SYA_CALMQ;
sprot_target db:uniprot_sprot|sp|A8MBI2|SYA_CALMQ 7 232 evalue:2.6e-26 qcov:91.50 identity:32.90;
29206 26552 CDS
ID metaerg.pl|09294
allgo_ids GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06437.1 41 820 evalue:1.7e-254 qcov:88.20 identity:62.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF12607; PF00924;
pfam_desc Protein of unknown function (DUF3772); Mechanosensitive ion channel;
pfam_id DUF3772; MS_channel;
pfam_target db:Pfam-A.hmm|PF12607.8 evalue:3.2e-09 score:35.7 best_domain_score:35.7 name:DUF3772; db:Pfam-A.hmm|PF00924.18 evalue:1.4e-53 score:180.8 best_domain_score:179.4 name:MS_channel;
tm_num 11;
29206 26552 transmembrane_helix
ID metaerg.pl|09295
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i26612-26680o27248-27316i27377-27445o27473-27541i27710-27778o27869-27937i27956-28024o28067-28135i28208-28267o28325-28393i28412-28480o;
29791 29402 CDS
ID metaerg.pl|09296
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Stappiaceae;g__Labrenzia;s__Labrenzia aggregata;
genomedb_acc GCF_000168975.1;
genomedb_target db:genomedb|GCF_000168975.1|WP_006936916.1 1 129 evalue:2.6e-39 qcov:100.00 identity:64.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
sp YES;
29402 29446 signal_peptide
ID metaerg.pl|09297
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
31049 30024 CDS
ID metaerg.pl|09298
allec_ids 2.5.1.-;
allgo_ids GO:0005737; GO:0005739; GO:0004124; GO:0080146; GO:0030170; GO:0006535;
allko_ids K01754; K13034; K01697; K01733; K12339; K10150; K01738;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06436.1 1 341 evalue:2.4e-169 qcov:100.00 identity:85.00;
kegg_pathway_id 00272; 00260; 00290; 00271; 00920; 00750; 00450;
kegg_pathway_name Cysteine metabolism; Glycine, serine and threonine metabolism; Valine, leucine and isoleucine biosynthesis; Methionine metabolism; Sulfur metabolism; Vitamin B6 metabolism; Selenoamino acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-6262; PWY-724; PWY-5861; POLYISOPRENSYN-PWY; PWY-5783; PWY-5805; PWY-5808; PWY-5897; PWY-5132; PWY-6263; PWY-5863; PWY-5816; PWY-5898; PWY-2681; PWY-5068; PWY-5862; PWY-5845; PWY-5896; PWY-5140; PWY-5701; PWY-6404; PWY-5806; PWY-5135; PWY-5899; PWY-5064; PWY-4502; PWY-5838; PWY-6520; PWY-5134; PWY-5817; PWY-6403; PWY-5864; PWY-5133; PWY-6129; PWY-6383; PWY-5027; PWY-5893;
metacyc_pathway_name demethylmenaquinol-8 biosynthesis II;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; polyisoprenoid biosynthesis (E. coli);; octaprenyl diphosphate biosynthesis;; nonaprenyl diphosphate biosynthesis I;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; lupulone and humulone biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; superpathway of phylloquinol biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of menaquinol-12 biosynthesis;; trans-zeatin biosynthesis;; chlorophyll cycle;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; cannabinoid biosynthesis;; shikonin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; xanthohumol biosynthesis;; superpathway of menaquinol-13 biosynthesis;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; nonaprenyl diphosphate biosynthesis II;; superpathway of bitter acids biosynthesis;; dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;; superpathway of plastoquinol biosynthesis;; colupulone and cohumulone biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;;
metacyc_pathway_type Demethylmenaquinol-8-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; CYTOKININ-BIOSYNTHESIS;; Chlorophyll-a-Biosynthesis;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; PRENYLFLAVONOID-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Lipid-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:1.2e-62 score:211.3 best_domain_score:211.1 name:PALP;
sprot_desc Cysteine synthase 1;
sprot_id sp|Q7RYW6|CYSK_NEUCR;
sprot_target db:uniprot_sprot|sp|Q7RYW6|CYSK_NEUCR 2 323 evalue:1.8e-91 qcov:94.40 identity:54.10;
31518 31093 CDS
ID metaerg.pl|09299
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06435.1 5 140 evalue:1.2e-21 qcov:96.50 identity:51.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
tm_num 4;
31518 31093 transmembrane_helix
ID metaerg.pl|09300
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i31129-31188o31246-31314i31333-31401o31414-31482i;
31976 31770 CDS
ID metaerg.pl|09301
allgo_ids GO:0003676; GO:0005737; GO:0003677;
allko_ids K03704;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08554.1 1 68 evalue:5.7e-30 qcov:100.00 identity:95.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00313; PF08206;
pfam_desc 'Cold-shock' DNA-binding domain; Ribonuclease B OB domain;
pfam_id CSD; OB_RNB;
pfam_target db:Pfam-A.hmm|PF00313.22 evalue:4.2e-25 score:86.6 best_domain_score:86.5 name:CSD; db:Pfam-A.hmm|PF08206.11 evalue:1.4e-05 score:24.0 best_domain_score:23.6 name:OB_RNB;
sprot_desc Probable cold shock protein y4cH;
sprot_id sp|P55390|Y4CH_SINFN;
sprot_target db:uniprot_sprot|sp|P55390|Y4CH_SINFN 1 65 evalue:5.4e-19 qcov:95.60 identity:68.20;
32558 32154 CDS
ID metaerg.pl|09302
allko_ids K01448; K01447;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08553.1 26 134 evalue:3.7e-41 qcov:81.30 identity:71.40;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF08239;
pfam_desc Bacterial SH3 domain;
pfam_id SH3_3;
pfam_target db:Pfam-A.hmm|PF08239.11 evalue:2e-11 score:43.2 best_domain_score:42.6 name:SH3_3;
sp YES;
32154 32279 signal_peptide
ID metaerg.pl|09303
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
32701 33660 CDS
ID metaerg.pl|09304
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH30291.1 27 269 evalue:5.7e-56 qcov:76.20 identity:53.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF01464;
pfam_desc Transglycosylase SLT domain;
pfam_id SLT;
pfam_target db:Pfam-A.hmm|PF01464.20 evalue:1.4e-05 score:24.0 best_domain_score:21.9 name:SLT;
sp YES;
32701 32871 signal_peptide
ID metaerg.pl|09305
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
33657 35786 CDS
ID metaerg.pl|09306
allgo_ids GO:0009306; GO:0016020; GO:0016021; GO:0005886; GO:0044780;
allko_ids K02400;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109532036.1 5 692 evalue:5.7e-290 qcov:97.00 identity:79.90;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00771;
pfam_desc FHIPEP family;
pfam_id FHIPEP;
pfam_target db:Pfam-A.hmm|PF00771.20 evalue:1.2e-209 score:697.4 best_domain_score:697.2 name:FHIPEP;
sprot_desc Flagellar biosynthesis protein FlhA;
sprot_id sp|Q03845|FLHA_CAUVC;
sprot_target db:uniprot_sprot|sp|Q03845|FLHA_CAUVC 5 692 evalue:9.6e-119 qcov:97.00 identity:39.50;
tigrfam_acc TIGR01398;
tigrfam_desc flagellar biosynthesis protein FlhA;
tigrfam_mainrole Cellular processes;
tigrfam_name FlhA;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR01398 evalue:3.5e-233 score:774.9 best_domain_score:774.7 name:TIGR01398;
tm_num 7;
33657 35786 transmembrane_helix
ID metaerg.pl|09307
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i33675-33743o33753-33821i33840-33893o33981-34049i34257-34325o34383-34451i34512-34580o;
35783 36580 CDS
ID metaerg.pl|09308
allgo_ids GO:0006605; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08550.1 1 264 evalue:5.4e-76 qcov:99.60 identity:62.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF01311;
pfam_desc Bacterial export proteins, family 1;
pfam_id Bac_export_1;
pfam_target db:Pfam-A.hmm|PF01311.20 evalue:8.8e-44 score:149.0 best_domain_score:148.7 name:Bac_export_1;
tm_num 6;
35783 36580 transmembrane_helix
ID metaerg.pl|09309
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o35825-35893i35912-35980o36017-36085i36185-36253o36347-36415i36434-36502o;
36577 37698 CDS
ID metaerg.pl|09310
allgo_ids GO:0009306; GO:0016020; GO:0016021; GO:0005886; GO:0044780;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08549.1 1 364 evalue:2.5e-127 qcov:97.60 identity:67.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF01312;
pfam_desc FlhB HrpN YscU SpaS Family;
pfam_id Bac_export_2;
pfam_target db:Pfam-A.hmm|PF01312.19 evalue:6.3e-103 score:343.7 best_domain_score:343.4 name:Bac_export_2;
sprot_desc Flagellar biosynthetic protein FlhB;
sprot_id sp|Q56886|FLHB_YEREN;
sprot_target db:uniprot_sprot|sp|Q56886|FLHB_YEREN 1 359 evalue:3.6e-40 qcov:96.20 identity:32.00;
tm_num 3;
36577 37698 transmembrane_helix
ID metaerg.pl|09311
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i36856-36924o37003-37071i37144-37212o;
37920 38444 CDS
ID metaerg.pl|09312
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068302950.1 1 163 evalue:4.0e-11 qcov:93.70 identity:36.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
38589 39107 CDS
ID metaerg.pl|09313
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08330.1 22 172 evalue:1.9e-34 qcov:87.80 identity:61.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF05099;
pfam_desc Tellurite resistance protein TerB;
pfam_id TerB;
pfam_target db:Pfam-A.hmm|PF05099.13 evalue:9.8e-29 score:99.4 best_domain_score:99.1 name:TerB;
39104 40645 CDS
ID metaerg.pl|09314
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479195.1 15 510 evalue:7.0e-165 qcov:96.70 identity:64.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00561; PF01738; PF12146;
pfam_desc alpha/beta hydrolase fold; Dienelactone hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; DLH; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:8.5e-10 score:37.9 best_domain_score:37.1 name:Abhydrolase_1; db:Pfam-A.hmm|PF01738.18 evalue:6.2e-07 score:28.4 best_domain_score:27.6 name:DLH; db:Pfam-A.hmm|PF12146.8 evalue:1.1e-14 score:53.6 best_domain_score:52.8 name:Hydrolase_4;
sp YES;
tm_num 10;
39104 39199 signal_peptide
ID metaerg.pl|09315
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
39104 40645 transmembrane_helix
ID metaerg.pl|09316
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i39137-39193o39251-39319i39893-39961o40019-40087i40106-40174o40217-40276i40313-40381o40409-40462i40475-40543o40571-40639i;
42319 40781 CDS
ID metaerg.pl|09317
allec_ids 4.1.99.13;
allgo_ids GO:0051539; GO:0003914; GO:0003677; GO:0071949; GO:0046872; GO:0000719; GO:0018298;
allko_ids K06876;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092890863.1 7 509 evalue:1.1e-202 qcov:98.20 identity:68.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF04244;
pfam_desc Deoxyribodipyrimidine photo-lyase-related protein;
pfam_id DPRP;
pfam_target db:Pfam-A.hmm|PF04244.13 evalue:2.1e-73 score:246.1 best_domain_score:244.9 name:DPRP;
sprot_desc (6-4) photolyase;
sprot_id sp|A9CH39|PHRB_AGRFC;
sprot_target db:uniprot_sprot|sp|A9CH39|PHRB_AGRFC 7 507 evalue:3.9e-154 qcov:97.90 identity:51.90;
42978 42316 CDS
ID metaerg.pl|09318
allec_ids 1.1.1.362;
allgo_ids GO:0016616; GO:0017000; GO:1901771; GO:0044598;
allko_ids K15944;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092891096.1 1 220 evalue:8.7e-80 qcov:100.00 identity:70.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00106; PF13561;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase;
pfam_id adh_short; adh_short_C2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:5.8e-13 score:48.0 best_domain_score:38.9 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.3e-13 score:49.5 best_domain_score:43.3 name:adh_short_C2;
sp YES;
sprot_desc Aklaviketone reductase DauE;
sprot_id sp|Q53882|DNRE_STRS5;
sprot_target db:uniprot_sprot|sp|Q53882|DNRE_STRS5 3 173 evalue:1.2e-06 qcov:77.70 identity:32.10;
42316 42372 signal_peptide
ID metaerg.pl|09319
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
43086 44018 CDS
ID metaerg.pl|09320
allec_ids 1.5.1.49;
allgo_ids GO:0016491;
allko_ids K01750;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07610.1 1 308 evalue:4.9e-129 qcov:99.40 identity:76.60;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF02423; PF01488;
pfam_desc Ornithine cyclodeaminase/mu-crystallin family; Shikimate / quinate 5-dehydrogenase;
pfam_id OCD_Mu_crystall; Shikimate_DH;
pfam_target db:Pfam-A.hmm|PF02423.15 evalue:6e-55 score:185.6 best_domain_score:185.4 name:OCD_Mu_crystall; db:Pfam-A.hmm|PF01488.20 evalue:1.1e-07 score:31.3 best_domain_score:30.1 name:Shikimate_DH;
sprot_desc Delta(1)-pyrroline-2-carboxylate reductase;
sprot_id sp|A1B196|PY2CR_PARDP;
sprot_target db:uniprot_sprot|sp|A1B196|PY2CR_PARDP 6 300 evalue:2.5e-79 qcov:95.20 identity:52.50;
44465 44028 CDS
ID metaerg.pl|09321
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28650.1 3 144 evalue:4.3e-43 qcov:97.90 identity:64.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF06271;
pfam_desc RDD family;
pfam_id RDD;
pfam_target db:Pfam-A.hmm|PF06271.12 evalue:6.1e-15 score:54.9 best_domain_score:54.6 name:RDD;
tm_num 3;
44465 44028 transmembrane_helix
ID metaerg.pl|09322
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o44112-44180i44217-44285o44328-44396i;
44938 44462 CDS
ID metaerg.pl|09323
allgo_ids GO:0002161;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08417.1 1 154 evalue:2.5e-60 qcov:97.50 identity:80.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF04073;
pfam_desc Aminoacyl-tRNA editing domain;
pfam_id tRNA_edit;
pfam_target db:Pfam-A.hmm|PF04073.15 evalue:5e-22 score:77.5 best_domain_score:77.1 name:tRNA_edit;
45468 44998 CDS
ID metaerg.pl|09324
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109532264.1 1 156 evalue:2.6e-62 qcov:100.00 identity:75.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF04386;
pfam_desc Stringent starvation protein B;
pfam_id SspB;
pfam_target db:Pfam-A.hmm|PF04386.13 evalue:9.7e-44 score:148.3 best_domain_score:148.1 name:SspB;
45714 47300 CDS
ID metaerg.pl|09325
allgo_ids GO:0043190; GO:0030288; GO:1904680; GO:0030420; GO:0015031; GO:0030435;
allko_ids K02035; K15580;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109532075.1 1 528 evalue:4.6e-244 qcov:100.00 identity:77.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:1.2e-60 score:204.7 best_domain_score:204.4 name:SBP_bac_5;
sp YES;
sprot_desc Oligopeptide-binding protein OppA;
sprot_id sp|P24141|OPPA_BACSU;
sprot_target db:uniprot_sprot|sp|P24141|OPPA_BACSU 27 516 evalue:5.1e-16 qcov:92.80 identity:21.70;
tm_num 1;
45714 45851 signal_peptide
ID metaerg.pl|09326
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
45714 47300 transmembrane_helix
ID metaerg.pl|09327
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i45774-45842o;
47317 48276 CDS
ID metaerg.pl|09328
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0006865;
allko_ids K02033; K13890;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08461.1 2 319 evalue:6.0e-138 qcov:99.70 identity:83.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:3.4e-31 score:107.7 best_domain_score:107.7 name:BPD_transp_1;
sprot_desc Probable peptide ABC transporter permease protein y4tP;
sprot_id sp|Q53191|Y4TP_SINFN;
sprot_target db:uniprot_sprot|sp|Q53191|Y4TP_SINFN 5 317 evalue:3.3e-42 qcov:98.10 identity:30.80;
tm_num 6;
47317 48276 transmembrane_helix
ID metaerg.pl|09329
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i47353-47421o47620-47688i47746-47814o47842-47910i48052-48120o48178-48246i;
48273 49091 CDS
ID metaerg.pl|09330
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015031;
allko_ids K02033; K02034;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08460.1 1 272 evalue:6.9e-127 qcov:100.00 identity:87.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00528; PF12911;
pfam_desc Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C;
pfam_id BPD_transp_1; OppC_N;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.3e-23 score:81.2 best_domain_score:81.2 name:BPD_transp_1; db:Pfam-A.hmm|PF12911.7 evalue:1.3e-06 score:27.6 best_domain_score:27.6 name:OppC_N;
sp YES;
sprot_desc Dipeptide transport system permease protein DppC;
sprot_id sp|P94312|DPPC_BACPE;
sprot_target db:uniprot_sprot|sp|P94312|DPPC_BACPE 8 257 evalue:2.5e-35 qcov:91.90 identity:33.30;
tm_num 5;
48273 48362 signal_peptide
ID metaerg.pl|09331
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
48273 49091 transmembrane_helix
ID metaerg.pl|09332
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o48288-48356i48486-48554o48597-48692i48858-48926o48969-49037i;
49084 50748 CDS
ID metaerg.pl|09333
allec_ids 7.4.2.10; 3.6.3.24;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015833;
allko_ids K02032; K02034; K02017; K13896; K11084; K02006; K02052; K02010; K05847; K01997; K02003; K02068; K11072; K02045; K02071; K06861; K01996; K11076; K02013; K10235; K05816; K06857; K01998; K10111; K10112; K02031; K02049; K02065; K01995; K11962; K02000; K10000; K02023; K12372; K02018; K10243; K01990; K13892;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08459.1 10 554 evalue:2.4e-259 qcov:98.40 identity:85.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF13304; PF13401; PF13555; PF00005; PF08352;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; P-loop containing region of AAA domain; ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id AAA_21; AAA_22; AAA_29; ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:5.2e-13 score:48.7 best_domain_score:16.1 name:AAA_21; db:Pfam-A.hmm|PF13401.6 evalue:1.2e-08 score:34.5 best_domain_score:22.8 name:AAA_22; db:Pfam-A.hmm|PF13555.6 evalue:2.2e-08 score:33.0 best_domain_score:17.9 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:9.1e-54 score:180.9 best_domain_score:108.0 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:6.7e-07 score:29.0 best_domain_score:13.8 name:oligo_HPY;
sprot_desc Glutathione import ATP-binding protein GsiA;
sprot_id sp|Q6D3A9|GSIA_PECAS;
sprot_target db:uniprot_sprot|sp|Q6D3A9|GSIA_PECAS 14 533 evalue:3.4e-87 qcov:93.90 identity:36.50;
tigrfam_acc TIGR02769; TIGR02770;
tigrfam_desc nickel import ATP-binding protein NikE; nickel import ATP-binding protein NikD;
tigrfam_mainrole Transport and binding proteins; Transport and binding proteins;
tigrfam_name nickel_nikE; nickel_nikD;
tigrfam_sub1role Cations and iron carrying compounds; Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR02769 evalue:7.3e-114 score:378.8 best_domain_score:229.9 name:TIGR02769; db:TIGRFAMs.hmm|TIGR02770 evalue:1.3e-105 score:351.0 best_domain_score:210.5 name:TIGR02770;
50873 52150 CDS
ID metaerg.pl|09334
allec_ids 2.7.7.27;
allgo_ids GO:0009058; GO:0016779; GO:0005524; GO:0008878; GO:0005978;
allko_ids K00975; K00640; K00677; K02536; K04042; K01840; K00966; K11528; K00972;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE48403.1 8 425 evalue:1.1e-206 qcov:98.40 identity:82.50;
kegg_pathway_id 00920; 00051; 00530; 00500; 00272; 00540;
kegg_pathway_name Sulfur metabolism; Fructose and mannose metabolism; Aminosugars metabolism; Starch and sucrose metabolism; Cysteine metabolism; Lipopolysaccharide biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-622; GLYCOGENSYNTH-PWY;
metacyc_pathway_name starch biosynthesis;; glycogen biosynthesis I (from ADP-D-Glucose);;
metacyc_pathway_type GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;;
pfam_acc PF00483; PF12804;
pfam_desc Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF00483.23 evalue:2.2e-64 score:216.7 best_domain_score:216.3 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:1.3e-07 score:31.3 best_domain_score:30.3 name:NTP_transf_3;
sprot_desc Glucose-1-phosphate adenylyltransferase;
sprot_id sp|Q28MN1|GLGC_JANSC;
sprot_target db:uniprot_sprot|sp|Q28MN1|GLGC_JANSC 11 422 evalue:1.4e-173 qcov:96.90 identity:72.30;
tigrfam_acc TIGR02091;
tigrfam_desc glucose-1-phosphate adenylyltransferase;
tigrfam_mainrole Energy metabolism;
tigrfam_name glgC;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02091 evalue:3.5e-147 score:489.3 best_domain_score:489.1 name:TIGR02091;
52147 53679 CDS
ID metaerg.pl|09335
allec_ids 2.4.1.21;
allgo_ids GO:0033201; GO:0004373; GO:0009011; GO:0005978;
allko_ids K00749; K00703;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068300161.1 23 510 evalue:5.9e-180 qcov:95.70 identity:68.40;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-622; GLYCOGENSYNTH-PWY;
metacyc_pathway_name starch biosynthesis;; glycogen biosynthesis I (from ADP-D-Glucose);;
metacyc_pathway_type GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;;
pfam_acc PF00534; PF08323; PF13692; PF13579;
pfam_desc Glycosyl transferases group 1; Starch synthase catalytic domain; Glycosyl transferases group 1; Glycosyl transferase 4-like domain;
pfam_id Glycos_transf_1; Glyco_transf_5; Glyco_trans_1_4; Glyco_trans_4_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:3.4e-13 score:48.7 best_domain_score:48.1 name:Glycos_transf_1; db:Pfam-A.hmm|PF08323.11 evalue:1.4e-65 score:220.7 best_domain_score:217.4 name:Glyco_transf_5; db:Pfam-A.hmm|PF13692.6 evalue:2e-10 score:40.5 best_domain_score:39.3 name:Glyco_trans_1_4; db:Pfam-A.hmm|PF13579.6 evalue:3.5e-09 score:36.5 best_domain_score:36.5 name:Glyco_trans_4_4;
sprot_desc Glycogen synthase;
sprot_id sp|A1BAE6|GLGA_PARDP;
sprot_target db:uniprot_sprot|sp|A1BAE6|GLGA_PARDP 25 502 evalue:8.4e-141 qcov:93.70 identity:56.80;
tigrfam_acc TIGR02095;
tigrfam_desc glycogen/starch synthase, ADP-glucose type;
tigrfam_mainrole Energy metabolism;
tigrfam_name glgA;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02095 evalue:2.8e-144 score:480.5 best_domain_score:480.3 name:TIGR02095;
53676 55769 CDS
ID metaerg.pl|09336
allec_ids 3.2.1.-;
allgo_ids GO:0003824; GO:0005975; GO:0004133; GO:0004553; GO:0005980;
allko_ids K01200; K00700; K01236; K01176;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE48401.1 1 690 evalue:0.0e+00 qcov:99.00 identity:79.60;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-5976; PWY-862; SUCROSEUTIL2-PWY; PWY-5821; PWY-5825;
metacyc_pathway_name dhurrin degradation;; fructan degradation;; sucrose degradation VII (sucrose 3-dehydrogenase);; dalcochinin biosynthesis;; dalpatein and dalnigrein biosynthesis;;
metacyc_pathway_type CYANOGENIC-GLUCOSIDE-DEG;; Glycan-Pathways; POLYSACCHARIDES-DEG;; SUCROSE-DEG;; ISOFLAVONOID-SYN;; ISOFLAVONOID-SYN;;
pfam_acc PF00128; PF02922;
pfam_desc Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain);
pfam_id Alpha-amylase; CBM_48;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:2.9e-17 score:62.5 best_domain_score:34.4 name:Alpha-amylase; db:Pfam-A.hmm|PF02922.18 evalue:2.3e-19 score:68.7 best_domain_score:67.3 name:CBM_48;
sprot_desc Glycogen operon protein GlgX homolog;
sprot_id sp|P0A4Y5|GLGX_MYCBO;
sprot_target db:uniprot_sprot|sp|P0A4Y5|GLGX_MYCBO 7 689 evalue:1.8e-178 qcov:98.00 identity:47.50;
tigrfam_acc TIGR02100;
tigrfam_desc glycogen debranching enzyme GlgX;
tigrfam_mainrole Energy metabolism;
tigrfam_name glgX_debranch;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02100 evalue:6.1e-296 score:982.2 best_domain_score:981.9 name:TIGR02100;
55762 57672 CDS
ID metaerg.pl|09337
allec_ids 2.4.1.25;
allgo_ids GO:0004134; GO:0005975; GO:0005737; GO:0102500;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE48400.1 8 635 evalue:2.8e-248 qcov:98.70 identity:67.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-5941; PWY-5767; GLYCOCAT-PWY; PWY-842;
metacyc_pathway_name glycogen degradation II;; ; glycogen degradation I;; starch degradation I;;
metacyc_pathway_type Glycan-Degradation; Glycogen-Degradation;; ; Glycan-Degradation; Glycogen-Degradation;; Glycan-Degradation; Starch-Degradation;;
pfam_acc PF02446;
pfam_desc 4-alpha-glucanotransferase;
pfam_id Glyco_hydro_77;
pfam_target db:Pfam-A.hmm|PF02446.17 evalue:7.2e-93 score:311.2 best_domain_score:310.8 name:Glyco_hydro_77;
sprot_desc 4-alpha-glucanotransferase;
sprot_id sp|P65337|MALQ_MYCBO;
sprot_target db:uniprot_sprot|sp|P65337|MALQ_MYCBO 97 611 evalue:1.4e-76 qcov:81.00 identity:34.30;
tigrfam_acc TIGR00217;
tigrfam_desc 4-alpha-glucanotransferase;
tigrfam_mainrole Energy metabolism;
tigrfam_name malQ;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00217 evalue:1.9e-74 score:250.7 best_domain_score:154.3 name:TIGR00217;
57688 59313 CDS
ID metaerg.pl|09338
allec_ids 5.4.2.2;
allgo_ids GO:0005975; GO:0016868; GO:0000287; GO:0004614; GO:0006006;
allko_ids K01835; K01840; K03431;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH27958.1 1 541 evalue:5.4e-232 qcov:100.00 identity:75.40;
kegg_pathway_id 00010; 00051; 00030; 00052; 00521; 00500; 00530;
kegg_pathway_name Glycolysis / Gluconeogenesis; Fructose and mannose metabolism; Pentose phosphate pathway; Galactose metabolism; Streptomycin biosynthesis; Starch and sucrose metabolism; Aminosugars metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-5767; GLYCOCAT-PWY; PWY-5661; PWY-842; PWY-622; SUCSYN-PWY; PWY-5941; PWY-5940; PWY-3801; PWY-621; PWY-5384;
metacyc_pathway_name ; glycogen degradation I;; GDP-glucose biosynthesis;; starch degradation I;; starch biosynthesis;; sucrose biosynthesis I (from photosynthesis);; glycogen degradation II;; streptomycin biosynthesis;; sucrose degradation II (sucrose synthase);; sucrose degradation III (sucrose invertase);; sucrose degradation IV (sucrose phosphorylase);;
metacyc_pathway_type ; Glycan-Degradation; Glycogen-Degradation;; GDP-Sugar-Biosynthesis;; Glycan-Degradation; Starch-Degradation;; GLYCOGEN-BIOSYN;; Sucrose-Biosynthesis; Super-Pathways;; Glycan-Degradation; Glycogen-Degradation;; Antibiotic-Biosynthesis;; SUCROSE-DEG;; SUCROSE-DEG;; SUCROSE-DEG;;
pfam_acc PF02878; PF02879; PF02880; PF00408;
pfam_desc Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain;
pfam_id PGM_PMM_I; PGM_PMM_II; PGM_PMM_III; PGM_PMM_IV;
pfam_target db:Pfam-A.hmm|PF02878.16 evalue:9.8e-29 score:99.1 best_domain_score:98.1 name:PGM_PMM_I; db:Pfam-A.hmm|PF02879.16 evalue:7.2e-15 score:54.7 best_domain_score:53.6 name:PGM_PMM_II; db:Pfam-A.hmm|PF02880.16 evalue:5.4e-31 score:106.4 best_domain_score:105.6 name:PGM_PMM_III; db:Pfam-A.hmm|PF00408.20 evalue:3.2e-05 score:23.2 best_domain_score:21.6 name:PGM_PMM_IV;
sprot_desc Phosphoglucomutase;
sprot_id sp|P39671|PGM_RHIRD;
sprot_target db:uniprot_sprot|sp|P39671|PGM_RHIRD 6 541 evalue:2.1e-174 qcov:99.10 identity:57.20;
60082 59480 CDS
ID metaerg.pl|09339
allgo_ids GO:0003677; GO:0046872; GO:0006310; GO:0006281;
allko_ids K06187;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068305430.1 4 200 evalue:2.5e-78 qcov:98.50 identity:74.10;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF02132; PF13662;
pfam_desc RecR protein; Toprim domain;
pfam_id RecR; Toprim_4;
pfam_target db:Pfam-A.hmm|PF02132.15 evalue:5.1e-14 score:50.8 best_domain_score:49.9 name:RecR; db:Pfam-A.hmm|PF13662.6 evalue:1e-26 score:92.4 best_domain_score:91.9 name:Toprim_4;
sprot_desc Recombination protein RecR;
sprot_id sp|A3PMA3|RECR_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PMA3|RECR_RHOS1 6 198 evalue:1.3e-73 qcov:96.50 identity:70.50;
tigrfam_acc TIGR00615;
tigrfam_desc recombination protein RecR;
tigrfam_mainrole DNA metabolism;
tigrfam_name recR;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00615 evalue:1.7e-63 score:212.8 best_domain_score:212.5 name:TIGR00615;
60480 60127 CDS
ID metaerg.pl|09340
allgo_ids GO:0043590; GO:0005737; GO:0003677;
allko_ids K09747;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Wenxinia;s__Wenxinia saemankumensis;
genomedb_acc GCF_900141735.1;
genomedb_target db:genomedb|GCF_900141735.1|WP_073327883.1 6 115 evalue:4.0e-39 qcov:94.00 identity:80.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF02575;
pfam_desc YbaB/EbfC DNA-binding family;
pfam_id YbaB_DNA_bd;
pfam_target db:Pfam-A.hmm|PF02575.16 evalue:2e-29 score:100.9 best_domain_score:100.6 name:YbaB_DNA_bd;
sprot_desc Nucleoid-associated protein Hhal_0231;
sprot_id sp|A1WTL3|Y231_HALHL;
sprot_target db:uniprot_sprot|sp|A1WTL3|Y231_HALHL 25 115 evalue:5.6e-16 qcov:77.80 identity:46.20;
tigrfam_acc TIGR00103;
tigrfam_desc DNA-binding protein, YbaB/EbfC family;
tigrfam_mainrole Unknown function;
tigrfam_name DNA_YbaB_EbfC;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00103 evalue:4.1e-24 score:83.8 best_domain_score:83.6 name:TIGR00103;
62307 60493 CDS
ID metaerg.pl|09341
allec_ids 2.7.7.7;
allgo_ids GO:0005524;
allko_ids K02343; K02340; K02341;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07775.1 1 604 evalue:4.5e-227 qcov:100.00 identity:71.90;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00004; PF07728; PF13177; PF12169; PF12362; PF05496;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); DNA polymerase III, delta subunit; DNA polymerase III subunits gamma and tau domain III; DNA polymerase III gamma and tau subunits C terminal; Holliday junction DNA helicase RuvB P-loop domain;
pfam_id AAA; AAA_5; DNA_pol3_delta2; DNA_pol3_gamma3; DUF3646; RuvB_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:3e-11 score:43.1 best_domain_score:42.0 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:2.8e-06 score:26.6 best_domain_score:16.9 name:AAA_5; db:Pfam-A.hmm|PF13177.6 evalue:6.5e-38 score:129.3 best_domain_score:128.6 name:DNA_pol3_delta2; db:Pfam-A.hmm|PF12169.8 evalue:4.1e-55 score:184.9 best_domain_score:183.6 name:DNA_pol3_gamma3; db:Pfam-A.hmm|PF12362.8 evalue:3.3e-36 score:123.3 best_domain_score:122.3 name:DUF3646; db:Pfam-A.hmm|PF05496.12 evalue:6.2e-06 score:25.3 best_domain_score:20.0 name:RuvB_N;
tigrfam_acc TIGR02397;
tigrfam_desc DNA polymerase III, subunit gamma and tau;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnaX_nterm;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02397 evalue:5.2e-127 score:423.1 best_domain_score:422.8 name:TIGR02397;
62441 63520 CDS
ID metaerg.pl|09342
allec_ids 4.1.1.37;
allgo_ids GO:0004853; GO:0006779; GO:0005737; GO:0006782;
allko_ids K01599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07230.1 21 359 evalue:1.2e-166 qcov:94.40 identity:86.40;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id HEME-BIOSYNTHESIS-II; PWY0-1415; CHLOROPHYLL-SYN; PWY-5918; PWY-5920; HEMESYN2-PWY; PWY-5529; PWY-5531;
metacyc_pathway_name heme b biosynthesis I (aerobic);; superpathway of heme b biosynthesis from uroporphyrinogen-III;; 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);; superpathay of heme b biosynthesis from glutamate;; superpathway of b heme biosynthesis from glycine;; heme b biosynthesis II (anaerobic);; superpathway of bacteriochlorophyll a biosynthesis;; 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);;
metacyc_pathway_type Heme-b-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;;
pfam_acc PF01208;
pfam_desc Uroporphyrinogen decarboxylase (URO-D);
pfam_id URO-D;
pfam_target db:Pfam-A.hmm|PF01208.17 evalue:4.7e-114 score:380.3 best_domain_score:380.2 name:URO-D;
sprot_desc Uroporphyrinogen decarboxylase;
sprot_id sp|Q16AR3|DCUP_ROSDO;
sprot_target db:uniprot_sprot|sp|Q16AR3|DCUP_ROSDO 21 359 evalue:1.7e-164 qcov:94.40 identity:82.60;
tigrfam_acc TIGR01464;
tigrfam_desc uroporphyrinogen decarboxylase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemE;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01464 evalue:1.7e-125 score:417.7 best_domain_score:417.5 name:TIGR01464;
63634 64608 CDS
ID metaerg.pl|09343
allec_ids 6.6.1.2;
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0051116; GO:0009236; GO:0006779;
allko_ids K09882;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06383.1 1 324 evalue:1.0e-177 qcov:100.00 identity:94.80;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id P381-PWY;
metacyc_pathway_name adenosylcobalamin biosynthesis II (aerobic);;
metacyc_pathway_type De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;;
pfam_acc PF00004; PF07728; PF12556;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); Cobaltochelatase CobS subunit N terminal;
pfam_id AAA; AAA_5; CobS_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:6.1e-05 score:22.7 best_domain_score:21.9 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:5.2e-15 score:54.9 best_domain_score:53.7 name:AAA_5; db:Pfam-A.hmm|PF12556.8 evalue:4.8e-12 score:44.6 best_domain_score:43.5 name:CobS_N;
sprot_desc Aerobic cobaltochelatase subunit CobS;
sprot_id sp|P29933|COBS_SINSX;
sprot_target db:uniprot_sprot|sp|P29933|COBS_SINSX 8 323 evalue:8.5e-131 qcov:97.50 identity:70.90;
tigrfam_acc TIGR01650;
tigrfam_desc cobaltochelatase, CobS subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name PD_CobS;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01650 evalue:9.6e-178 score:589.4 best_domain_score:589.2 name:TIGR01650;
65157 64693 CDS
ID metaerg.pl|09344
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__GCA-002705045;s__GCA-002705045 sp002704385;
genomedb_acc GCA_002704385.2;
genomedb_target db:genomedb|GCA_002704385.2|PQM65513.1 22 143 evalue:1.6e-19 qcov:79.20 identity:43.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
tm_num 4;
65157 64693 transmembrane_helix
ID metaerg.pl|09345
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i64750-64818o64876-64944i64963-65031o65059-65118i;
65430 65765 CDS
ID metaerg.pl|09346
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
sp YES;
65430 65480 lipoprotein_signal_peptide
ID metaerg.pl|09347
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
65873 67756 CDS
ID metaerg.pl|09348
allec_ids 6.6.1.2;
allgo_ids GO:0009236; GO:0005737; GO:0005524; GO:0051116; GO:0006779;
allko_ids K09883;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06379.1 6 625 evalue:9.5e-297 qcov:98.90 identity:85.00;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id P381-PWY;
metacyc_pathway_name adenosylcobalamin biosynthesis II (aerobic);;
metacyc_pathway_type De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;;
pfam_acc PF06213; PF11775;
pfam_desc Cobalamin biosynthesis protein CobT; Cobalamin biosynthesis protein CobT VWA domain;
pfam_id CobT; CobT_C;
pfam_target db:Pfam-A.hmm|PF06213.12 evalue:2.3e-88 score:295.4 best_domain_score:294.8 name:CobT; db:Pfam-A.hmm|PF11775.8 evalue:1.1e-102 score:341.6 best_domain_score:341.1 name:CobT_C;
sprot_desc Aerobic cobaltochelatase subunit CobT;
sprot_id sp|P29934|COBT_SINSX;
sprot_target db:uniprot_sprot|sp|P29934|COBT_SINSX 4 614 evalue:3.5e-165 qcov:97.40 identity:61.20;
tigrfam_acc TIGR01651;
tigrfam_desc cobaltochelatase, CobT subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name CobT;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01651 evalue:1.1e-245 score:816.2 best_domain_score:816.0 name:TIGR01651;
68443 67904 CDS
ID metaerg.pl|09349
allec_ids 5.3.3.2;
allgo_ids GO:0016787; GO:0005737; GO:0004452; GO:0046872; GO:0015995; GO:0050992; GO:0008299; GO:0015979;
allko_ids K01823;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tranquillimonas;s__Tranquillimonas alkanivorans;
genomedb_acc GCF_900115595.1;
genomedb_target db:genomedb|GCF_900115595.1|WP_093417422.1 7 177 evalue:1.4e-67 qcov:95.50 identity:72.50;
kegg_pathway_id 00900; 00100;
kegg_pathway_name Terpenoid biosynthesis; Biosynthesis of steroids;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-5121; PWY-5910; POLYISOPRENSYN-PWY; PWY-6383; PWY-5123; PWY-922; PWY-6404; PWY-6174; PWY-6270; PWY-6146; NONMEVIPP-PWY;
metacyc_pathway_name superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; polyisoprenoid biosynthesis (E. coli);; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; trans, trans-farnesyl diphosphate biosynthesis;; mevalonate pathway I;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; mevalonate pathway II (archaea);; isoprene biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; methylerythritol phosphate pathway I;;
metacyc_pathway_type DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; All-Trans-Farnesyl-PP-Biosynthesis;; Mevalonate-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; Mevalonate-Pathways;; ISOPRENOIDS; Super-Pathways;; Biosynthesis; Super-Pathways;; MEP-Pathways;;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:3e-19 score:68.6 best_domain_score:68.3 name:NUDIX;
sprot_desc Isopentenyl-diphosphate Delta-isomerase;
sprot_id sp|B9KK15|IDI_RHOSK;
sprot_target db:uniprot_sprot|sp|B9KK15|IDI_RHOSK 6 174 evalue:1.0e-64 qcov:94.40 identity:67.50;
tigrfam_acc TIGR02150;
tigrfam_desc isopentenyl-diphosphate delta-isomerase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name IPP_isom_1;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02150 evalue:4e-31 score:107.2 best_domain_score:106.9 name:TIGR02150;
69621 68440 CDS
ID metaerg.pl|09350
allec_ids 1.3.1.83; 1.3.1.-;
allgo_ids GO:0016491; GO:0055114; GO:0102067; GO:0045550; GO:0036070; GO:0015979;
allko_ids K10960;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246216.1 1 393 evalue:3.5e-204 qcov:100.00 identity:90.10;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-5064; PWY-5063; PWY-5863; PWY-5393; HCAMHPDEG-PWY; PWY-3481; PWY1A0-6325; PWY-6088; PWY-3461; PWY-5466; PWY-5972; PWY5F9-3233; PWY-5729; PWY-5367;
metacyc_pathway_name chlorophyll a biosynthesis II;; phytyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; raspberry ketone biosynthesis;; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; actinorhodin biosynthesis;; 3-chlorobenzoate degradation I (via chlorocatechol);; L-tyrosine biosynthesis II;; matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);; phthalate degradation (aerobic);; vestitol and sativan biosynthesis;; petroselinate biosynthesis;;
metacyc_pathway_type Chlorophyll-a-Biosynthesis;; Phytyl-Diphosphate-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Phenolic-Compounds-Degradation;; Amino-Acid-Biosynthesis; Super-Pathways;; Antibiotic-Biosynthesis;; 3-Chlorobenzoate-Degradation;; TYROSINE-SYN;; LIGNAN-SYN;; Stearate-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; ISOFLAVONOID-SYN;; Unsaturated-Fatty-Acids-Biosynthesis;;
pfam_acc PF01266; PF01494; PF05834; PF13450; PF07992; PF04820;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; Lycopene cyclase protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Tryptophan halogenase;
pfam_id DAO; FAD_binding_3; Lycopene_cycl; NAD_binding_8; Pyr_redox_2; Trp_halogenase;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:3.1e-08 score:32.8 best_domain_score:19.2 name:DAO; db:Pfam-A.hmm|PF01494.19 evalue:8.9e-19 score:67.1 best_domain_score:30.3 name:FAD_binding_3; db:Pfam-A.hmm|PF05834.12 evalue:3.9e-09 score:35.3 best_domain_score:31.4 name:Lycopene_cycl; db:Pfam-A.hmm|PF13450.6 evalue:2.3e-06 score:27.0 best_domain_score:25.1 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:1.1e-09 score:37.1 best_domain_score:36.6 name:Pyr_redox_2; db:Pfam-A.hmm|PF04820.14 evalue:8.8e-09 score:33.9 best_domain_score:12.9 name:Trp_halogenase;
sprot_desc Geranylgeranyl diphosphate reductase;
sprot_id sp|P26172|BCHP_RHOCB;
sprot_target db:uniprot_sprot|sp|P26172|BCHP_RHOCB 1 393 evalue:8.1e-160 qcov:100.00 identity:72.00;
tigrfam_acc TIGR02023; TIGR02032;
tigrfam_desc geranylgeranyl reductase; geranylgeranyl reductase family;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name BchP-ChlP; GG-red-SF;
tigrfam_sub1role Chlorophyll and bacteriochlorphyll; Chlorophyll and bacteriochlorphyll;
tigrfam_target db:TIGRFAMs.hmm|TIGR02023 evalue:7.7e-168 score:557.6 best_domain_score:557.4 name:TIGR02023; db:TIGRFAMs.hmm|TIGR02032 evalue:8.3e-81 score:271.1 best_domain_score:270.7 name:TIGR02032;
70913 69624 CDS
ID metaerg.pl|09351
allgo_ids GO:0016021; GO:0055085; GO:0036070; GO:0015979;
allko_ids K08226;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479757.1 6 421 evalue:4.5e-173 qcov:97.00 identity:80.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF07690; PF03209;
pfam_desc Major Facilitator Superfamily; PUCC protein;
pfam_id MFS_1; PUCC;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:1.5e-12 score:46.4 best_domain_score:42.2 name:MFS_1; db:Pfam-A.hmm|PF03209.15 evalue:3.1e-105 score:351.7 best_domain_score:351.3 name:PUCC;
sprot_desc Bacteriochlorophyll synthase 44.5 kDa chain;
sprot_id sp|P26171|BCH2_RHOCB;
sprot_target db:uniprot_sprot|sp|P26171|BCH2_RHOCB 6 429 evalue:6.2e-121 qcov:98.80 identity:59.30;
tm_num 12;
70913 69624 transmembrane_helix
ID metaerg.pl|09352
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i69657-69716o69729-69797i69855-69923o69951-70019i70053-70121o70149-70217i70305-70364o70422-70490i70509-70577o70590-70658i70695-70763o70791-70859i;
71848 70910 CDS
ID metaerg.pl|09353
allec_ids 2.5.1.-;
allgo_ids GO:0016021; GO:0016765; GO:0005886; GO:0036070; GO:0015979;
allko_ids K04040;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469939.1 23 308 evalue:7.1e-144 qcov:91.70 identity:84.60;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id PWY-5838; PWY-4502; PWY-5064; PWY-5899; PWY-5134; PWY-6520; PWY-5817; PWY-6403; PWY-5133; PWY-5864; PWY-6129; PWY-6383; PWY-5893; PWY-5027; PWY-724; PWY-5861; PWY-6262; PWY-5805; PWY-5783; POLYISOPRENSYN-PWY; PWY-5132; PWY-5808; PWY-5897; PWY-6263; PWY-5898; PWY-5816; PWY-5863; PWY-5896; PWY-5862; PWY-5845; PWY-5068; PWY-2681; PWY-5701; PWY-5140; PWY-5135; PWY-5806; PWY-6404;
metacyc_pathway_name superpathway of menaquinol-8 biosynthesis I;; wighteone and luteone biosynthesis;; chlorophyll a biosynthesis II;; superpathway of menaquinol-13 biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; tridecaprenyl diphosphate biosynthesis;; phylloquinol biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; demethylmenaquinol-8 biosynthesis II;; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; polyisoprenoid biosynthesis (E. coli);; lupulone and humulone biosynthesis;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; superpathway of menaquinol-12 biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;; shikonin biosynthesis;; cannabinoid biosynthesis;; xanthohumol biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; QUINONE-SYN;; TERPENOPHENOLICS-SYN;; PRENYLFLAVONOID-SYN;; Polyprenyl-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF01040;
pfam_desc UbiA prenyltransferase family;
pfam_id UbiA;
pfam_target db:Pfam-A.hmm|PF01040.18 evalue:2.6e-39 score:134.3 best_domain_score:133.8 name:UbiA;
sprot_desc Bacteriochlorophyll synthase 33 kDa chain;
sprot_id sp|Q9Z5D6|BCHG_RHOS4;
sprot_target db:uniprot_sprot|sp|Q9Z5D6|BCHG_RHOS4 22 309 evalue:2.2e-128 qcov:92.30 identity:74.40;
tigrfam_acc TIGR01476;
tigrfam_desc bacteriochlorophyll/chlorophyll synthetase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name chlor_syn_BchG;
tigrfam_sub1role Chlorophyll and bacteriochlorphyll;
tigrfam_target db:TIGRFAMs.hmm|TIGR01476 evalue:4.8e-114 score:379.7 best_domain_score:379.5 name:TIGR01476;
tm_num 6;
71848 70910 transmembrane_helix
ID metaerg.pl|09354
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o71033-71101i71228-71281o71294-71347i71435-71503o71597-71665i71753-71821o;
71992 73452 CDS
ID metaerg.pl|09355
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386177.1 4 486 evalue:3.4e-92 qcov:99.40 identity:43.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00805; PF13576; PF13599;
pfam_desc Pentapeptide repeats (8 copies); Pentapeptide repeats (9 copies); Pentapeptide repeats (9 copies);
pfam_id Pentapeptide; Pentapeptide_3; Pentapeptide_4;
pfam_target db:Pfam-A.hmm|PF00805.22 evalue:2.2e-16 score:58.4 best_domain_score:31.9 name:Pentapeptide; db:Pfam-A.hmm|PF13576.6 evalue:9.3e-07 score:28.2 best_domain_score:12.1 name:Pentapeptide_3; db:Pfam-A.hmm|PF13599.6 evalue:1.3e-08 score:34.1 best_domain_score:32.5 name:Pentapeptide_4;
tm_num 3;
71992 73452 transmembrane_helix
ID metaerg.pl|09356
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o72034-72102i72160-72228o72256-72324i;
75009 73507 CDS
ID metaerg.pl|09357
allec_ids 7.1.1.1;
allgo_ids GO:0016021; GO:0005886; GO:0008750; GO:0050661;
allko_ids K00325;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469204.1 1 500 evalue:1.4e-239 qcov:100.00 identity:86.60;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF02233;
pfam_desc NAD(P) transhydrogenase beta subunit;
pfam_id PNTB;
pfam_target db:Pfam-A.hmm|PF02233.16 evalue:8.3e-185 score:614.3 best_domain_score:613.9 name:PNTB;
sprot_desc NAD(P) transhydrogenase subunit beta;
sprot_id sp|P0AB69|PNTB_ECO57;
sprot_target db:uniprot_sprot|sp|P0AB69|PNTB_ECO57 1 496 evalue:2.1e-144 qcov:99.20 identity:59.70;
tm_num 9;
75009 73507 transmembrane_helix
ID metaerg.pl|09358
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o73516-73584i73603-73662o73672-73731i73768-73836o73894-73953i73972-74040o74098-74166i74185-74253o74329-74397i;
76600 75029 CDS
ID metaerg.pl|09359
allec_ids 7.1.1.1; 1.6.1.2;
allgo_ids GO:0005887; GO:0051287; GO:0008750; GO:0046983; GO:0034599; GO:0006116; GO:0006740; GO:1902600;
allko_ids K00323; K00324; K00259; K00322; K00325;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07218.1 1 523 evalue:1.0e-235 qcov:100.00 identity:83.00;
kegg_pathway_id 00720; 00760; 00430;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Nicotinate and nicotinamide metabolism; Taurine and hypotaurine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
metacyc_pathway_id NADPHOS-DEPHOS-PWY;
metacyc_pathway_name NAD phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;;
pfam_acc PF01262; PF05222; PF12769;
pfam_desc Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; 4TM region of pyridine nucleotide transhydrogenase, mitoch;
pfam_id AlaDh_PNT_C; AlaDh_PNT_N; PNTB_4TM;
pfam_target db:Pfam-A.hmm|PF01262.21 evalue:1.8e-72 score:242.3 best_domain_score:242.3 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF05222.15 evalue:2.5e-49 score:166.3 best_domain_score:165.0 name:AlaDh_PNT_N; db:Pfam-A.hmm|PF12769.7 evalue:3e-31 score:106.9 best_domain_score:106.9 name:PNTB_4TM;
sprot_desc NAD(P) transhydrogenase subunit alpha;
sprot_id sp|Q9ALA2|PNTA_RHOSH;
sprot_target db:uniprot_sprot|sp|Q9ALA2|PNTA_RHOSH 1 523 evalue:5.3e-215 qcov:100.00 identity:79.00;
tigrfam_acc TIGR00561;
tigrfam_desc NAD(P)(+) transhydrogenase (AB-specific), alpha subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name pntA;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR00561 evalue:1.7e-202 score:672.8 best_domain_score:672.6 name:TIGR00561;
tm_num 5;
76600 75029 transmembrane_helix
ID metaerg.pl|09360
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o75536-75604i76271-76324o76334-76402i76421-76480o76493-76561i;
76871 77845 CDS
ID metaerg.pl|09361
allec_ids 2.7.4.1;
allgo_ids GO:0008976; GO:0006793;
allko_ids K22468;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068302831.1 27 319 evalue:5.5e-131 qcov:90.40 identity:79.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF03976;
pfam_desc Polyphosphate kinase 2 (PPK2);
pfam_id PPK2;
pfam_target db:Pfam-A.hmm|PF03976.14 evalue:8.4e-103 score:342.0 best_domain_score:341.8 name:PPK2;
sprot_desc Polyphosphate:NDP phosphotransferase 2;
sprot_id sp|Q5LU04|PK21B_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LU04|PK21B_RUEPO 64 319 evalue:3.5e-116 qcov:79.00 identity:77.00;
tigrfam_acc TIGR03707;
tigrfam_desc polyphosphate kinase 2;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name PPK2_P_aer;
tigrfam_sub1role Phosphorus compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR03707 evalue:5.4e-113 score:375.5 best_domain_score:375.3 name:TIGR03707;
78112 77876 CDS
ID metaerg.pl|09362
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068302833.1 1 74 evalue:2.1e-20 qcov:94.90 identity:74.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
tm_num 2;
78112 77876 transmembrane_helix
ID metaerg.pl|09363
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o77891-77959i78020-78088o;
78315 78566 CDS
ID metaerg.pl|09364
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ04979.1 2 82 evalue:9.1e-30 qcov:97.60 identity:86.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF10073;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2312);
pfam_id DUF2312;
pfam_target db:Pfam-A.hmm|PF10073.9 evalue:6.6e-32 score:108.2 best_domain_score:108.1 name:DUF2312;
sprot_desc hypothetical protein;
sprot_id sp|A1UR66|Y130_BARBK;
sprot_target db:uniprot_sprot|sp|A1UR66|Y130_BARBK 2 82 evalue:2.0e-15 qcov:97.60 identity:53.10;
78761 78836 tRNA
ID metaerg.pl|09365
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
name tRNA_Thr_tgt;
78986 80428 CDS
ID metaerg.pl|09366
allgo_ids GO:0016021; GO:0016765; GO:0005886; GO:0009877;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07165.1 1 478 evalue:1.2e-153 qcov:99.60 identity:62.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF12710; PF01040;
pfam_desc haloacid dehalogenase-like hydrolase; UbiA prenyltransferase family;
pfam_id HAD; UbiA;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:3e-12 score:46.6 best_domain_score:41.9 name:HAD; db:Pfam-A.hmm|PF01040.18 evalue:8.2e-23 score:80.2 best_domain_score:80.2 name:UbiA;
sprot_desc hypothetical protein;
sprot_id sp|P55585|Y4NM_SINFN;
sprot_target db:uniprot_sprot|sp|P55585|Y4NM_SINFN 3 477 evalue:2.0e-67 qcov:99.00 identity:36.70;
tm_num 8;
78986 80428 transmembrane_helix
ID metaerg.pl|09367
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology o79652-79720i79781-79849o79859-79927i79940-80008o80018-80071i80150-80218o80255-80314i80348-80416o;
80428 80889 CDS
ID metaerg.pl|09368
allgo_ids GO:0000271; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH30133.1 18 145 evalue:2.0e-43 qcov:83.70 identity:69.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF04138;
pfam_desc GtrA-like protein;
pfam_id GtrA;
pfam_target db:Pfam-A.hmm|PF04138.14 evalue:4.2e-11 score:42.3 best_domain_score:42.1 name:GtrA;
tm_num 3;
80428 80889 transmembrane_helix
ID metaerg.pl|09369
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i80488-80556o80569-80637i80695-80763o;
80886 82223 CDS
ID metaerg.pl|09370
allec_ids 1.1.98.3;
allgo_ids GO:0016491; GO:0050660; GO:0055114; GO:0016020; GO:0042597; GO:0003885; GO:0071949; GO:0045227; GO:0071555; GO:0046677;
allko_ids K16653;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07167.1 8 445 evalue:9.1e-169 qcov:98.40 identity:69.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF01565;
pfam_desc FAD binding domain;
pfam_id FAD_binding_4;
pfam_target db:Pfam-A.hmm|PF01565.23 evalue:1.1e-17 score:63.3 best_domain_score:62.3 name:FAD_binding_4;
sprot_desc Decaprenylphosphoryl-beta-D-ribose oxidase;
sprot_id sp|P9WJF0|DPRE1_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WJF0|DPRE1_MYCTO 5 445 evalue:3.8e-65 qcov:99.10 identity:38.20;
82220 82993 CDS
ID metaerg.pl|09371
allec_ids 1.1.1.62;
allgo_ids GO:0016020; GO:0005740; GO:0005759; GO:0005739; GO:0005886; GO:0003857; GO:0047025; GO:0004303; GO:0070404; GO:0016616; GO:0047035; GO:0008209; GO:0006703; GO:0008210; GO:0006633; GO:0055114; GO:0051290;
allko_ids K13370;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07168.1 14 257 evalue:1.1e-86 qcov:94.90 identity:73.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2.8e-29 score:101.2 best_domain_score:100.8 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.2e-21 score:75.8 best_domain_score:75.4 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:1.4e-07 score:30.8 best_domain_score:30.2 name:KR;
sprot_desc Estradiol 17-beta-dehydrogenase 8;
sprot_id sp|P50171|DHB8_MOUSE;
sprot_target db:uniprot_sprot|sp|P50171|DHB8_MOUSE 14 201 evalue:2.3e-06 qcov:73.20 identity:28.90;
83153 84586 CDS
ID metaerg.pl|09372
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08326.1 14 475 evalue:5.5e-79 qcov:96.90 identity:45.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
tm_num 1;
83153 84586 transmembrane_helix
ID metaerg.pl|09373
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
topology i83261-83329o;
84872 84675 CDS
ID metaerg.pl|09374
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
84911 85288 CDS
ID metaerg.pl|09375
allgo_ids GO:0003700; GO:0006355;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF00126;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family;
pfam_id HTH_1;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:3.9e-08 score:32.4 best_domain_score:31.6 name:HTH_1;
85252 85509 CDS
ID metaerg.pl|09376
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius nitratireducens;
genomedb_acc GCF_002925845.1;
genomedb_target db:genomedb|GCF_002925845.1|WP_104017898.1 3 85 evalue:1.7e-07 qcov:97.60 identity:47.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
pfam_acc PF02626;
pfam_desc Carboxyltransferase domain, subdomain A and B;
pfam_id CT_A_B;
pfam_target db:Pfam-A.hmm|PF02626.15 evalue:2.2e-07 score:30.0 best_domain_score:29.9 name:CT_A_B;
85961 85885 tRNA
ID metaerg.pl|09377
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.049341; 21.0779; 0.694305; 24.9973; 3.17579;
name tRNA_Arg_ccg;
>Feature NODE_66_length_84672_cov_43.9831
486 1310 CDS
ID metaerg.pl|09378
allko_ids K00694; K12992; K00721; K12984;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093933.1 1 274 evalue:6.7e-146 qcov:100.00 identity:90.90;
kegg_pathway_id 00510; 00500;
kegg_pathway_name N-Glycan biosynthesis; Starch and sucrose metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00535;
pfam_desc Glycosyl transferase family 2;
pfam_id Glycos_transf_2;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:3.8e-17 score:61.8 best_domain_score:61.1 name:Glycos_transf_2;
tm_num 1;
486 1310 transmembrane_helix
ID metaerg.pl|09379
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i1158-1226o;
2263 1367 CDS
ID metaerg.pl|09380
allgo_ids GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091419.1 6 298 evalue:9.5e-154 qcov:98.30 identity:86.00;
kegg_pathway_id 00626; 00450; 00350; 00150; 00380; 00340;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tyrosine metabolism; Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF08241; PF08242; PF13489; PF13649; PF13847; PF01209;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; ubiE/COQ5 methyltransferase family;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:4.4e-17 score:61.7 best_domain_score:60.5 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.6e-09 score:37.6 best_domain_score:36.8 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:1.5e-10 score:40.4 best_domain_score:40.0 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.7e-15 score:56.8 best_domain_score:55.8 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:2.3e-11 score:43.0 best_domain_score:42.5 name:Methyltransf_31; db:Pfam-A.hmm|PF01209.18 evalue:3e-07 score:29.3 best_domain_score:28.6 name:Ubie_methyltran;
2570 3388 CDS
ID metaerg.pl|09381
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091418.1 5 272 evalue:7.8e-139 qcov:98.50 identity:89.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF13640; PF13661;
pfam_desc 2OG-Fe(II) oxygenase superfamily; 2OG-Fe(II) oxygenase superfamily;
pfam_id 2OG-FeII_Oxy_3; 2OG-FeII_Oxy_4;
pfam_target db:Pfam-A.hmm|PF13640.6 evalue:1e-13 score:51.2 best_domain_score:50.6 name:2OG-FeII_Oxy_3; db:Pfam-A.hmm|PF13661.6 evalue:2.5e-10 score:40.1 best_domain_score:39.2 name:2OG-FeII_Oxy_4;
3762 4889 CDS
ID metaerg.pl|09382
allec_ids 3.2.1.52;
allgo_ids GO:0004553; GO:0005975; GO:0004563; GO:0102148;
allko_ids K01207;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093932.1 1 374 evalue:8.4e-184 qcov:99.70 identity:88.20;
kegg_pathway_id 01032; 00530;
kegg_pathway_name Glycan structures - degradation; Aminosugars metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id PWY-6573;
metacyc_pathway_name chondroitin sulfate degradation (metazoa);;
metacyc_pathway_type Glycan-Degradation; Glycosaminoglycan-Degradation;;
pfam_acc PF00933;
pfam_desc Glycosyl hydrolase family 3 N terminal domain;
pfam_id Glyco_hydro_3;
pfam_target db:Pfam-A.hmm|PF00933.21 evalue:1.3e-71 score:240.8 best_domain_score:240.6 name:Glyco_hydro_3;
sprot_desc Beta-hexosaminidase A;
sprot_id sp|P48823|HEXA_PSEO7;
sprot_target db:uniprot_sprot|sp|P48823|HEXA_PSEO7 21 346 evalue:4.9e-45 qcov:86.90 identity:33.80;
5245 4886 CDS
ID metaerg.pl|09383
allgo_ids GO:0003677; GO:0006355; GO:0046872; GO:0005737; GO:0032993; GO:0001217; GO:0000976; GO:0045892; GO:0046688;
allko_ids K21600;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091417.1 1 119 evalue:2.1e-56 qcov:100.00 identity:95.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF02583;
pfam_desc Metal-sensitive transcriptional repressor;
pfam_id Trns_repr_metal;
pfam_target db:Pfam-A.hmm|PF02583.17 evalue:2.3e-26 score:91.2 best_domain_score:90.9 name:Trns_repr_metal;
sprot_desc Copper-sensing transcriptional repressor RicR;
sprot_id sp|O07434|RICR_MYCTU;
sprot_target db:uniprot_sprot|sp|O07434|RICR_MYCTU 26 118 evalue:2.5e-11 qcov:78.20 identity:42.10;
5669 5340 CDS
ID metaerg.pl|09384
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
tm_num 2;
5669 5340 transmembrane_helix
ID metaerg.pl|09385
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i5442-5510o5538-5606i;
5872 7110 CDS
ID metaerg.pl|09386
allgo_ids GO:0005515; GO:0030288; GO:0042802; GO:0004252;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_042202804.1 1 411 evalue:3.1e-203 qcov:99.80 identity:91.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00595; PF13180; PF17820; PF10459; PF00089; PF13365;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Peptidase S46; Trypsin; Trypsin-like peptidase domain;
pfam_id PDZ; PDZ_2; PDZ_6; Peptidase_S46; Trypsin; Trypsin_2;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:2e-07 score:30.5 best_domain_score:28.7 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:2.4e-15 score:55.8 best_domain_score:54.0 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:2.2e-12 score:45.8 best_domain_score:44.4 name:PDZ_6; db:Pfam-A.hmm|PF10459.9 evalue:2.9e-06 score:25.5 best_domain_score:15.5 name:Peptidase_S46; db:Pfam-A.hmm|PF00089.26 evalue:6.8e-18 score:64.5 best_domain_score:63.8 name:Trypsin; db:Pfam-A.hmm|PF13365.6 evalue:3.1e-37 score:128.0 best_domain_score:127.0 name:Trypsin_2;
sp YES;
sprot_desc Putative serine protease HhoA;
sprot_id sp|P72780|HHOA_SYNY3;
sprot_target db:uniprot_sprot|sp|P72780|HHOA_SYNY3 68 411 evalue:2.3e-117 qcov:83.50 identity:62.60;
tm_num 1;
5872 5985 signal_peptide
ID metaerg.pl|09387
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
5872 7110 transmembrane_helix
ID metaerg.pl|09388
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i5908-5976o;
7209 8390 CDS
ID metaerg.pl|09389
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091445.1 1 393 evalue:2.2e-214 qcov:100.00 identity:91.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00248;
pfam_desc Aldo/keto reductase family;
pfam_id Aldo_ket_red;
pfam_target db:Pfam-A.hmm|PF00248.21 evalue:2.2e-22 score:78.9 best_domain_score:77.5 name:Aldo_ket_red;
9829 8471 CDS
ID metaerg.pl|09390
allgo_ids GO:0016021; GO:0005886; GO:0050660;
allko_ids K03699;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198222.1 1 443 evalue:4.4e-203 qcov:98.00 identity:83.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00571; PF03471; PF01595;
pfam_desc CBS domain; Transporter associated domain; Cyclin M transmembrane N-terminal domain;
pfam_id CBS; CorC_HlyC; DUF21;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:2.2e-11 score:43.2 best_domain_score:21.0 name:CBS; db:Pfam-A.hmm|PF03471.17 evalue:6.7e-21 score:73.3 best_domain_score:71.0 name:CorC_HlyC; db:Pfam-A.hmm|PF01595.20 evalue:7.8e-44 score:148.7 best_domain_score:148.2 name:DUF21;
sprot_desc hypothetical protein;
sprot_id sp|P74409|Y260_SYNY3;
sprot_target db:uniprot_sprot|sp|P74409|Y260_SYNY3 2 443 evalue:4.6e-114 qcov:97.80 identity:49.30;
tm_num 4;
9829 8471 transmembrane_helix
ID metaerg.pl|09391
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology o8498-8566i8678-8746o8774-8842i8876-8944o;
10050 13568 CDS
ID metaerg.pl|09392
allec_ids 3.6.4.-; 3.6.1.-;
allgo_ids GO:0003676; GO:0005524; GO:0005737; GO:0003684; GO:0004386; GO:0006355; GO:0000716;
allko_ids K10896; K05591; K03723;
casgene_acc cd09639_cas3_CAS-I;
casgene_name cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:4.2e-07 score:28.6 best_domain_score:24.7 name:cas3;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091870.1 1 1172 evalue:0.0e+00 qcov:100.00 identity:96.80;
kegg_pathway_id 03420;
kegg_pathway_name Nucleotide excision repair;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id PWY-6502; PWY-6147; ALL-CHORISMATE-PWY; PWY-6383; FOLSYN-PWY; PWY-6404; PWY-5354;
metacyc_pathway_name oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; superpathway of chorismate metabolism;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ;
metacyc_pathway_type Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;; Super-Pathways;; Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; ;
pfam_acc PF02559; PF00270; PF00271; PF04851; PF03461; PF17757;
pfam_desc CarD-like/TRCF domain; DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TRCF domain; UvrB interaction domain;
pfam_id CarD_CdnL_TRCF; DEAD; Helicase_C; ResIII; TRCF; UvrB_inter;
pfam_target db:Pfam-A.hmm|PF02559.16 evalue:1.4e-23 score:82.7 best_domain_score:80.5 name:CarD_CdnL_TRCF; db:Pfam-A.hmm|PF00270.29 evalue:6.8e-21 score:74.1 best_domain_score:63.4 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:4.3e-20 score:71.4 best_domain_score:61.0 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:2.4e-08 score:33.4 best_domain_score:31.2 name:ResIII; db:Pfam-A.hmm|PF03461.15 evalue:1.1e-21 score:76.3 best_domain_score:74.7 name:TRCF; db:Pfam-A.hmm|PF17757.1 evalue:4.7e-21 score:74.0 best_domain_score:72.8 name:UvrB_inter;
sprot_desc Transcription-repair-coupling factor;
sprot_id sp|Q55750|MFD_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55750|MFD_SYNY3 1 1168 evalue:0.0e+00 qcov:99.70 identity:66.30;
tigrfam_acc TIGR00580;
tigrfam_desc transcription-repair coupling factor;
tigrfam_mainrole DNA metabolism;
tigrfam_name mfd;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00580 evalue:0 score:1120.5 best_domain_score:1120.3 name:TIGR00580;
13904 15043 CDS
ID metaerg.pl|09393
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aphanizomenon_A;s__Aphanizomenon_A sp001277295;
genomedb_acc GCF_001277295.1;
genomedb_target db:genomedb|GCF_001277295.1|WP_053537850.1 1 379 evalue:1.6e-190 qcov:100.00 identity:91.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF03235;
pfam_desc Protein of unknown function DUF262;
pfam_id DUF262;
pfam_target db:Pfam-A.hmm|PF03235.14 evalue:1.4e-17 score:63.9 best_domain_score:63.9 name:DUF262;
15040 16140 CDS
ID metaerg.pl|09394
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aphanizomenon_A;s__Aphanizomenon_A sp001277295;
genomedb_acc GCF_001277295.1;
genomedb_target db:genomedb|GCF_001277295.1|WP_053537851.1 1 335 evalue:4.5e-166 qcov:91.50 identity:86.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF13175; PF13304; PF13476; PF13514; PF12476;
pfam_desc AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; AAA domain; Protein of unknown function (DUF3696);
pfam_id AAA_15; AAA_21; AAA_23; AAA_27; DUF3696;
pfam_target db:Pfam-A.hmm|PF13175.6 evalue:6.7e-24 score:84.5 best_domain_score:55.0 name:AAA_15; db:Pfam-A.hmm|PF13304.6 evalue:8e-20 score:71.1 best_domain_score:67.0 name:AAA_21; db:Pfam-A.hmm|PF13476.6 evalue:4e-09 score:36.5 best_domain_score:35.8 name:AAA_23; db:Pfam-A.hmm|PF13514.6 evalue:6.1e-06 score:25.2 best_domain_score:24.4 name:AAA_27; db:Pfam-A.hmm|PF12476.8 evalue:9.6e-13 score:47.6 best_domain_score:46.6 name:DUF3696;
16144 17094 CDS
ID metaerg.pl|09395
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Dolichospermum_A;s__Dolichospermum_A compactum;
genomedb_acc GCF_002368115.1;
genomedb_target db:genomedb|GCF_002368115.1|WP_096667181.1 1 316 evalue:3.4e-154 qcov:100.00 identity:85.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
17425 17126 CDS
ID metaerg.pl|09396
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chamaesiphonaceae;g__Chamaesiphon;s__Chamaesiphon polymorphus;
genomedb_acc GCF_003003845.1;
genomedb_target db:genomedb|GCF_003003845.1|WP_106310501.1 7 97 evalue:8.6e-19 qcov:91.90 identity:58.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
tm_num 1;
17425 17126 transmembrane_helix
ID metaerg.pl|09397
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology o17201-17269i;
17530 17769 CDS
ID metaerg.pl|09398
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091873.1 1 79 evalue:7.5e-34 qcov:100.00 identity:92.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
sp YES;
tm_num 2;
17530 17616 signal_peptide
ID metaerg.pl|09399
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
17530 17769 transmembrane_helix
ID metaerg.pl|09400
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i17548-17616o17686-17754i;
18614 17874 CDS
ID metaerg.pl|09401
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091874.1 1 246 evalue:1.5e-120 qcov:100.00 identity:90.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF14345;
pfam_desc GDYXXLXY protein;
pfam_id GDYXXLXY;
pfam_target db:Pfam-A.hmm|PF14345.6 evalue:2.8e-34 score:117.3 best_domain_score:117.0 name:GDYXXLXY;
20274 18853 CDS
ID metaerg.pl|09402
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091875.1 1 473 evalue:6.1e-256 qcov:100.00 identity:96.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF09925;
pfam_desc Predicted membrane protein (DUF2157);
pfam_id DUF2157;
pfam_target db:Pfam-A.hmm|PF09925.9 evalue:3.4e-45 score:152.7 best_domain_score:152.7 name:DUF2157;
tm_num 12;
20274 18853 transmembrane_helix
ID metaerg.pl|09403
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i18991-19059o19087-19146i19207-19275o19318-19386i19483-19551o19609-19668i19726-19785o19828-19896i19933-20001o20029-20088i20107-20160o20173-20241i;
20395 21384 CDS
ID metaerg.pl|09404
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091876.1 1 317 evalue:9.4e-171 qcov:96.40 identity:91.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF01189;
pfam_desc 16S rRNA methyltransferase RsmB/F;
pfam_id Methyltr_RsmB-F;
pfam_target db:Pfam-A.hmm|PF01189.17 evalue:3.6e-28 score:97.8 best_domain_score:97.3 name:Methyltr_RsmB-F;
21606 24068 CDS
ID metaerg.pl|09405
allgo_ids GO:0005525;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091881.1 1 820 evalue:0.0e+00 qcov:100.00 identity:89.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00350; PF01926;
pfam_desc Dynamin family; 50S ribosome-binding GTPase;
pfam_id Dynamin_N; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00350.23 evalue:2.9e-18 score:65.7 best_domain_score:64.2 name:Dynamin_N; db:Pfam-A.hmm|PF01926.23 evalue:2.4e-07 score:30.1 best_domain_score:23.6 name:MMR_HSR1;
24156 24401 CDS
ID metaerg.pl|09406
allgo_ids GO:0003676; GO:0004519;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091882.1 1 80 evalue:7.2e-40 qcov:98.80 identity:95.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF01844; PF13395; PF14279;
pfam_desc HNH endonuclease; HNH endonuclease; HNH endonuclease;
pfam_id HNH; HNH_4; HNH_5;
pfam_target db:Pfam-A.hmm|PF01844.23 evalue:2e-16 score:59.1 best_domain_score:58.8 name:HNH; db:Pfam-A.hmm|PF13395.6 evalue:1.1e-07 score:30.9 best_domain_score:30.5 name:HNH_4; db:Pfam-A.hmm|PF14279.6 evalue:6.5e-22 score:76.4 best_domain_score:76.1 name:HNH_5;
24693 26867 CDS
ID metaerg.pl|09407
allgo_ids GO:0005524; GO:0016887;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus_A;s__Trichormus_A sp001858025;
genomedb_acc GCF_001858025.1;
genomedb_target db:genomedb|GCF_001858025.1|WP_071190655.1 1 723 evalue:0.0e+00 qcov:99.90 identity:79.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF07728;
pfam_desc AAA domain (dynein-related subfamily);
pfam_id AAA_5;
pfam_target db:Pfam-A.hmm|PF07728.14 evalue:6.3e-09 score:35.2 best_domain_score:33.7 name:AAA_5;
tm_num 1;
24693 26867 transmembrane_helix
ID metaerg.pl|09408
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i24711-24779o;
26867 28417 CDS
ID metaerg.pl|09409
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus_A;s__Trichormus_A sp001858025;
genomedb_acc GCF_001858025.1;
genomedb_target db:genomedb|GCF_001858025.1|WP_071190654.1 1 516 evalue:4.1e-189 qcov:100.00 identity:66.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF09823;
pfam_desc Domain of unknown function (DUF2357);
pfam_id DUF2357;
pfam_target db:Pfam-A.hmm|PF09823.9 evalue:2.8e-10 score:39.1 best_domain_score:37.9 name:DUF2357;
28420 30009 CDS
ID metaerg.pl|09410
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus_A;s__Trichormus_A sp001858025;
genomedb_acc GCF_001858025.1;
genomedb_target db:genomedb|GCF_001858025.1|WP_071190653.1 1 526 evalue:8.7e-219 qcov:99.40 identity:71.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF13087; PF09848;
pfam_desc AAA domain; Uncharacterized conserved protein (DUF2075);
pfam_id AAA_12; DUF2075;
pfam_target db:Pfam-A.hmm|PF13087.6 evalue:1.1e-09 score:37.4 best_domain_score:34.7 name:AAA_12; db:Pfam-A.hmm|PF09848.9 evalue:0.00012 score:20.7 best_domain_score:12.7 name:DUF2075;
30006 31709 CDS
ID metaerg.pl|09411
allgo_ids GO:0003824;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus_A;s__Trichormus_A sp001858025;
genomedb_acc GCF_001858025.1;
genomedb_target db:genomedb|GCF_001858025.1|WP_071190652.1 1 567 evalue:2.1e-218 qcov:100.00 identity:69.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00614; PF13091;
pfam_desc Phospholipase D Active site motif; PLD-like domain;
pfam_id PLDc; PLDc_2;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:6.9e-06 score:25.3 best_domain_score:13.8 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:2.2e-21 score:75.4 best_domain_score:56.0 name:PLDc_2;
31713 34073 CDS
ID metaerg.pl|09412
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus_A;s__Trichormus_A sp001858025;
genomedb_acc GCF_001858025.1;
genomedb_target db:genomedb|GCF_001858025.1|WP_071190651.1 1 786 evalue:7.2e-286 qcov:100.00 identity:65.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
34645 34181 CDS
ID metaerg.pl|09413
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093962.1 1 154 evalue:2.8e-69 qcov:100.00 identity:94.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF06146;
pfam_desc Phosphate-starvation-inducible E;
pfam_id PsiE;
pfam_target db:Pfam-A.hmm|PF06146.12 evalue:1e-11 score:44.3 best_domain_score:43.5 name:PsiE;
tm_num 3;
34645 34181 transmembrane_helix
ID metaerg.pl|09414
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i34250-34318o34361-34417i34529-34597o;
37596 34936 CDS
ID metaerg.pl|09415
allgo_ids GO:0003824; GO:0005975;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006199217.1 1 886 evalue:0.0e+00 qcov:100.00 identity:94.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF12055; PF03065;
pfam_desc Domain of unknown function (DUF3536); Glycosyl hydrolase family 57;
pfam_id DUF3536; Glyco_hydro_57;
pfam_target db:Pfam-A.hmm|PF12055.8 evalue:4.5e-129 score:429.0 best_domain_score:428.5 name:DUF3536; db:Pfam-A.hmm|PF03065.15 evalue:1.1e-15 score:56.9 best_domain_score:55.4 name:Glyco_hydro_57;
38066 39151 CDS
ID metaerg.pl|09416
allgo_ids GO:0016021; GO:0055085; GO:0005887; GO:0015369; GO:0070588;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091884.1 1 361 evalue:7.4e-177 qcov:100.00 identity:94.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF01699;
pfam_desc Sodium/calcium exchanger protein;
pfam_id Na_Ca_ex;
pfam_target db:Pfam-A.hmm|PF01699.24 evalue:5.4e-34 score:116.6 best_domain_score:65.3 name:Na_Ca_ex;
sp YES;
sprot_desc Ca(2+)/H(+) antiporter;
sprot_id sp|Q75XW3|CAX_APHHA;
sprot_target db:uniprot_sprot|sp|Q75XW3|CAX_APHHA 2 361 evalue:1.1e-134 qcov:99.70 identity:71.20;
tigrfam_acc TIGR00378; TIGR00846;
tigrfam_desc calcium/proton exchanger; calcium/proton exchanger;
tigrfam_mainrole Transport and binding proteins; Transport and binding proteins;
tigrfam_name cax; caca2;
tigrfam_sub1role Cations and iron carrying compounds; Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR00378 evalue:4.3e-147 score:489.0 best_domain_score:488.7 name:TIGR00378; db:TIGRFAMs.hmm|TIGR00846 evalue:5.8e-103 score:343.7 best_domain_score:343.5 name:TIGR00846;
tm_num 11;
38066 38122 signal_peptide
ID metaerg.pl|09417
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
38066 39151 transmembrane_helix
ID metaerg.pl|09418
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i38078-38131o38144-38203i38222-38290o38333-38401i38435-38503o38531-38599i38681-38749o38762-38830i38891-38959o38987-39046i39065-39133o;
39909 40478 CDS
ID metaerg.pl|09419
allko_ids K01448; K01447;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093963.1 3 189 evalue:1.0e-73 qcov:98.90 identity:80.20;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF01471; PF09374;
pfam_desc Putative peptidoglycan binding domain; Predicted Peptidoglycan domain;
pfam_id PG_binding_1; PG_binding_3;
pfam_target db:Pfam-A.hmm|PF01471.18 evalue:1.7e-15 score:56.2 best_domain_score:55.4 name:PG_binding_1; db:Pfam-A.hmm|PF09374.10 evalue:6e-09 score:35.3 best_domain_score:27.2 name:PG_binding_3;
42948 40528 CDS
ID metaerg.pl|09420
allec_ids 2.4.1.13;
allgo_ids GO:0005985; GO:0016157;
allko_ids K00695; K12989; K00712;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093964.1 1 806 evalue:0.0e+00 qcov:100.00 identity:96.40;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id PWY-621; PWY-3801; PWY-5114; SUCSYN-PWY; PWY-3821;
metacyc_pathway_name sucrose degradation III (sucrose invertase);; sucrose degradation II (sucrose synthase);; UDP-sugars interconversion;; sucrose biosynthesis I (from photosynthesis);; D-galactose detoxification;;
metacyc_pathway_type SUCROSE-DEG;; SUCROSE-DEG;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; Sucrose-Biosynthesis; Super-Pathways;; Detoxification;;
pfam_acc PF00534; PF13692; PF00862;
pfam_desc Glycosyl transferases group 1; Glycosyl transferases group 1; Sucrose synthase;
pfam_id Glycos_transf_1; Glyco_trans_1_4; Sucrose_synth;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:6.1e-23 score:80.4 best_domain_score:79.1 name:Glycos_transf_1; db:Pfam-A.hmm|PF13692.6 evalue:2.5e-10 score:40.2 best_domain_score:39.0 name:Glyco_trans_1_4; db:Pfam-A.hmm|PF00862.19 evalue:2.1e-222 score:738.5 best_domain_score:737.9 name:Sucrose_synth;
sprot_desc Sucrose synthase;
sprot_id sp|Q8DK23|SUS_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DK23|SUS_THEEB 4 806 evalue:0.0e+00 qcov:99.60 identity:70.40;
tigrfam_acc TIGR02470;
tigrfam_desc sucrose synthase;
tigrfam_mainrole Energy metabolism;
tigrfam_name sucr_synth;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02470 evalue:0 score:1258.3 best_domain_score:1258.1 name:TIGR02470;
43575 43502 tRNA
ID metaerg.pl|09421
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
name tRNA_His_gtg;
43648 44082 CDS
ID metaerg.pl|09422
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091886.1 19 144 evalue:1.9e-59 qcov:87.50 identity:95.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF14271;
pfam_desc Domain of unknown function (DUF4359);
pfam_id DUF4359;
pfam_target db:Pfam-A.hmm|PF14271.6 evalue:1.7e-38 score:130.6 best_domain_score:130.2 name:DUF4359;
sp YES;
tm_num 1;
43648 43770 signal_peptide
ID metaerg.pl|09423
Note TAT;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
43648 44082 transmembrane_helix
ID metaerg.pl|09424
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i43708-43776o;
44134 45477 CDS
ID metaerg.pl|09425
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K07673; K11265; K13302; K00924; K04424; K07682; K03407; K11623; K04442; K07683; K07778; K08884; K08810; K11228; K08854; K11912; K08790; K11889; K04444; K08855; K08333; K08282; K08856; K04420; K04421; K08286; K08850; K01768; K08809; K04373; K08792; K05098; K05096; K05097; K02480; K04445; K04372; K04443; K01728; K02178; K07675; K13414; K02486; K08853; K04688; K05688; K13304; K13303;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__PCC-7507;s__PCC-7507 sp000316575;
genomedb_acc GCF_000316575.1;
genomedb_target db:genomedb|GCF_000316575.1|WP_015129879.1 1 441 evalue:4.5e-168 qcov:98.70 identity:66.70;
kegg_pathway_id 04510; 00230; 04530; 04111; 04140; 04150; 00040; 05012; 04110; 04010; 04011; 02020;
kegg_pathway_name Focal adhesion; Purine metabolism; Tight junction; Cell cycle - yeast; Regulation of autophagy; mTOR signaling pathway; Pentose and glucuronate interconversions; Parkinson's disease; Cell cycle; MAPK signaling pathway; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF05419; PF00069; PF07714; PF10707;
pfam_desc GUN4-like ; Protein kinase domain; Protein tyrosine kinase; PhoP regulatory network protein YrbL;
pfam_id GUN4; Pkinase; Pkinase_Tyr; YrbL-PhoP_reg;
pfam_target db:Pfam-A.hmm|PF05419.12 evalue:3.3e-35 score:120.4 best_domain_score:114.3 name:GUN4; db:Pfam-A.hmm|PF00069.25 evalue:8.1e-44 score:149.2 best_domain_score:148.7 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:1.3e-22 score:79.6 best_domain_score:79.0 name:Pkinase_Tyr; db:Pfam-A.hmm|PF10707.9 evalue:7.5e-05 score:21.6 best_domain_score:21.0 name:YrbL-PhoP_reg;
45494 46201 CDS
ID metaerg.pl|09426
allgo_ids GO:0009236; GO:0016852;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091887.1 1 235 evalue:5.4e-112 qcov:100.00 identity:89.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF01903;
pfam_desc CbiX;
pfam_id CbiX;
pfam_target db:Pfam-A.hmm|PF01903.17 evalue:1.1e-38 score:131.1 best_domain_score:69.7 name:CbiX;
46198 46977 CDS
ID metaerg.pl|09427
allec_ids 2.1.1.107;
allgo_ids GO:0008168; GO:0004851; GO:0009236; GO:0055114; GO:0019354;
allko_ids K02303;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091888.1 1 259 evalue:3.8e-135 qcov:100.00 identity:95.80;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id PWY-5196; PWY-5194; P381-PWY;
metacyc_pathway_name factor 430 biosynthesis;; siroheme biosynthesis;; adenosylcobalamin biosynthesis II (aerobic);;
metacyc_pathway_type Cofactor-Biosynthesis;; Porphyrin-Compounds-Biosynthesis;; De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;;
pfam_acc PF00590;
pfam_desc Tetrapyrrole (Corrin/Porphyrin) Methylases;
pfam_id TP_methylase;
pfam_target db:Pfam-A.hmm|PF00590.20 evalue:5.4e-47 score:159.7 best_domain_score:159.5 name:TP_methylase;
sprot_desc Uroporphyrinogen-III C-methyltransferase;
sprot_id sp|Q55749|SUMT_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55749|SUMT_SYNY3 12 248 evalue:1.1e-96 qcov:91.50 identity:74.30;
tigrfam_acc TIGR01469;
tigrfam_desc uroporphyrinogen-III C-methyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cobA_cysG_Cterm;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01469 evalue:1.5e-96 score:321.9 best_domain_score:321.7 name:TIGR01469;
47008 47625 CDS
ID metaerg.pl|09428
allec_ids 2.1.1.-;
allgo_ids GO:0008168; GO:0005789; GO:0005811;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Chroococcidiopsidaceae;g__Chroococcidiopsis;s__Chroococcidiopsis thermalis;
genomedb_acc GCF_000317125.1;
genomedb_target db:genomedb|GCF_000317125.1|WP_015152740.1 1 204 evalue:7.1e-92 qcov:99.50 identity:78.90;
kegg_pathway_id 00340; 00380; 00150; 00350; 00450; 00626;
kegg_pathway_name Histidine metabolism; Tryptophan metabolism; Androgen and estrogen metabolism; Tyrosine metabolism; Selenoamino acid metabolism; Naphthalene and anthracene degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id PWY-5864; PWY-5975; PWY-1061; PWY-5876; PWY-1422; PWY-5729; PWY-6113; PWYG-321; PWY-5305; CODH-PWY; PWY-6575; PWY-6442; PWY-6477; PWY-5467; PWY-6153; ALL-CHORISMATE-PWY; PWY-3542; PWY-4021; PWY-5041; PWY-6519; PWY-5773; PWY-5328; METHIONINE-DEG1-PWY; PWY-5116; PWY-1581; CO2FORM-PWY; PWY-6292; PWY-5987; PWY-5479; PWY-6427; PWY-6395; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-6303; PWY-5857; PWY-6151; PWY-5855; PWY-5209; UBISYN-PWY; PWY-6154; PWY-6424; PWY-6142; PWY-5856; METH-ACETATE-PWY;
metacyc_pathway_name superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; vitamin E biosynthesis (tocopherols);; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; bixin biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; gibberellin inactivation II (methylation);; gramine biosynthesis;; autoinducer AI-2 biosynthesis I;; superpathway of chorismate metabolism;; choline biosynthesis II;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; superpathway of L-cysteine biosynthesis (mammalian);; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; xanthohumol biosynthesis;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; S-adenosyl-L-methionine cycle I;; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; methanogenesis from acetate;;
metacyc_pathway_type Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; APOCAROTENOID-SYN;; Autotrophic-CO2-Fixation;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; Autoinducer-Biosynthesis;; Super-Pathways;; Choline-Biosynthesis;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; CYSTEINE-SYN; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Super-Pathways; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;;
pfam_acc PF08241; PF08242; PF13489; PF13649; PF13847; PF05148; PF01209;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Hypothetical methyltransferase; ubiE/COQ5 methyltransferase family;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; Methyltransf_8; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:1.2e-21 score:76.4 best_domain_score:73.9 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:8.9e-12 score:44.9 best_domain_score:42.1 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:8.6e-17 score:60.7 best_domain_score:60.3 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.2e-17 score:63.6 best_domain_score:62.3 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:3.7e-10 score:39.0 best_domain_score:38.1 name:Methyltransf_31; db:Pfam-A.hmm|PF05148.15 evalue:0.0002 score:20.5 best_domain_score:20.3 name:Methyltransf_8; db:Pfam-A.hmm|PF01209.18 evalue:8.2e-14 score:50.7 best_domain_score:50.5 name:Ubie_methyltran;
sprot_desc Methyltransferase-like protein 7B;
sprot_id sp|Q562C4|MET7B_RAT;
sprot_target db:uniprot_sprot|sp|Q562C4|MET7B_RAT 26 182 evalue:1.1e-19 qcov:76.60 identity:37.20;
47663 48100 CDS
ID metaerg.pl|09429
allko_ids K06957; K00669;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091891.1 1 145 evalue:1.2e-72 qcov:100.00 identity:93.10;
kegg_pathway_id 00380;
kegg_pathway_name Tryptophan metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00583; PF13673; PF13508;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.6e-07 score:30.8 best_domain_score:29.8 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:2.8e-13 score:49.1 best_domain_score:48.3 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:3.5e-12 score:45.8 best_domain_score:42.0 name:Acetyltransf_7;
48134 49333 CDS
ID metaerg.pl|09430
allec_ids 1.14.13.232;
allgo_ids GO:0016491; GO:0055114; GO:0071949; GO:0004497; GO:0017000;
allko_ids K14253;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091894.1 1 399 evalue:2.3e-203 qcov:100.00 identity:90.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF01266; PF00890; PF01494; PF13450; PF07992; PF04820;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; FAD binding domain; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Tryptophan halogenase;
pfam_id DAO; FAD_binding_2; FAD_binding_3; NAD_binding_8; Pyr_redox_2; Trp_halogenase;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:2e-07 score:30.2 best_domain_score:24.2 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.3e-05 score:23.7 best_domain_score:11.2 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:6.4e-36 score:123.5 best_domain_score:123.2 name:FAD_binding_3; db:Pfam-A.hmm|PF13450.6 evalue:1.9e-05 score:24.0 best_domain_score:23.0 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:6.1e-08 score:31.5 best_domain_score:20.1 name:Pyr_redox_2; db:Pfam-A.hmm|PF04820.14 evalue:9e-10 score:37.2 best_domain_score:15.4 name:Trp_halogenase;
sprot_desc 6-methylpretetramide 4-monooxygenase;
sprot_id sp|Q3S8R0|OXYE_STRRM;
sprot_target db:uniprot_sprot|sp|Q3S8R0|OXYE_STRRM 4 379 evalue:1.1e-31 qcov:94.20 identity:28.70;
49510 49719 CDS
ID metaerg.pl|09431
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Fischerella;s__Fischerella sp000517105;
genomedb_acc GCF_000517105.1;
genomedb_target db:genomedb|GCF_000517105.1|WP_026734984.1 1 69 evalue:6.9e-15 qcov:100.00 identity:58.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
tm_num 2;
49510 49719 transmembrane_helix
ID metaerg.pl|09432
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i49528-49584o49627-49695i;
50976 49876 CDS
ID metaerg.pl|09433
allgo_ids GO:0000160; GO:0030428; GO:0006995; GO:0043158;
allko_ids K01937; K08282; K07704; K07708; K07677; K11231; K07642; K11711; K11640; K11356; K02484; K07711; K07768; K07778; K11354; K07651; K07648; K07679; K02478; K07637; K03407; K07682; K07654; K07652; K08475; K07639; K07673; K01120; K07641; K07646; K10125; K11357; K04757; K12767; K13761; K02486; K11383; K07675; K07717; K07647; K06379; K07676; K10681; K07644; K07636; K07653; K02480; K02482; K10715; K07678; K11527; K10916; K08479; K03388; K02668; K01768; K07710; K07716; K02489;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091896.1 1 366 evalue:1.1e-193 qcov:100.00 identity:93.20;
kegg_pathway_id 03090; 04011; 02020; 00240; 00790; 05111; 00230;
kegg_pathway_name Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General; Pyrimidine metabolism; Folate biosynthesis; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF14332; PF00072;
pfam_desc Domain of unknown function (DUF4388); Response regulator receiver domain;
pfam_id DUF4388; Response_reg;
pfam_target db:Pfam-A.hmm|PF14332.6 evalue:2.3e-08 score:33.5 best_domain_score:31.9 name:DUF4388; db:Pfam-A.hmm|PF00072.24 evalue:7.5e-26 score:89.7 best_domain_score:89.1 name:Response_reg;
sprot_desc hypothetical protein;
sprot_id sp|P39048|PATA_NOSS1;
sprot_target db:uniprot_sprot|sp|P39048|PATA_NOSS1 1 366 evalue:3.2e-134 qcov:100.00 identity:64.00;
52559 53512 CDS
ID metaerg.pl|09434
allec_ids 5.4.99.-;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0000455;
allko_ids K06180;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091898.1 1 316 evalue:3.8e-169 qcov:99.70 identity:93.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id PWY-6008; PWY-5672; PWY-5992; PWY-5203; PWY-6109; PWY-5377; PWY-112; RIBOKIN-PWY; PWY-6005; PWY-6115;
metacyc_pathway_name baruol biosynthesis;; ginsenosides biosynthesis;; thalianol and derivatives biosynthesis;; soybean saponin I biosynthesis;; mangrove triterpenoid biosynthesis;; α-amyrin biosynthesis;; lupeol biosynthesis;; ribose phosphorylation;; marneral biosynthesis;; ;
metacyc_pathway_type TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; Sugars-And-Polysaccharides-Degradation;; TRITERPENOID-SYN;; ;
pfam_acc PF00849; PF01479;
pfam_desc RNA pseudouridylate synthase; S4 domain;
pfam_id PseudoU_synth_2; S4;
pfam_target db:Pfam-A.hmm|PF00849.22 evalue:3.6e-33 score:114.1 best_domain_score:113.7 name:PseudoU_synth_2; db:Pfam-A.hmm|PF01479.25 evalue:7.8e-12 score:44.0 best_domain_score:43.2 name:S4;
sprot_desc Uncharacterized RNA pseudouridine synthase slr1629;
sprot_id sp|P74346|Y1629_SYNY3;
sprot_target db:uniprot_sprot|sp|P74346|Y1629_SYNY3 18 315 evalue:6.7e-104 qcov:94.00 identity:60.10;
tigrfam_acc TIGR00005;
tigrfam_desc pseudouridine synthase, RluA family;
tigrfam_mainrole Protein synthesis;
tigrfam_name rluA_subfam;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00005 evalue:1.7e-98 score:328.8 best_domain_score:328.6 name:TIGR00005;
54214 54735 CDS
ID metaerg.pl|09435
allgo_ids GO:0015979; GO:0030089; GO:0055114; GO:0018298;
allko_ids K02285;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp000316645;
genomedb_acc GCF_000316645.1;
genomedb_target db:genomedb|GCF_000316645.1|WP_015140353.1 1 173 evalue:3.4e-87 qcov:100.00 identity:97.70;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00502;
pfam_desc Phycobilisome protein;
pfam_id Phycobilisome;
pfam_target db:Pfam-A.hmm|PF00502.19 evalue:4.9e-62 score:207.7 best_domain_score:207.5 name:Phycobilisome;
sprot_desc C-phycocyanin subunit beta;
sprot_id sp|P07120|PHCB_NOSS1;
sprot_target db:uniprot_sprot|sp|P07120|PHCB_NOSS1 1 172 evalue:4.3e-89 qcov:99.40 identity:97.70;
tigrfam_acc TIGR01339;
tigrfam_desc phycocyanin, beta subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name phycocy_beta;
tigrfam_sub1role Photosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01339 evalue:3.9e-96 score:319.0 best_domain_score:318.8 name:TIGR01339;
54815 55306 CDS
ID metaerg.pl|09436
allgo_ids GO:0015979; GO:0030089; GO:0055114; GO:0018298;
allko_ids K02284;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091905.1 1 163 evalue:3.7e-83 qcov:100.00 identity:96.90;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00502;
pfam_desc Phycobilisome protein;
pfam_id Phycobilisome;
pfam_target db:Pfam-A.hmm|PF00502.19 evalue:7.3e-49 score:164.9 best_domain_score:164.7 name:Phycobilisome;
sprot_desc C-phycocyanin alpha chain;
sprot_id sp|P07121|PHCA_NOSS1;
sprot_target db:uniprot_sprot|sp|P07121|PHCA_NOSS1 1 163 evalue:4.7e-77 qcov:100.00 identity:86.50;
tigrfam_acc TIGR01338;
tigrfam_desc phycocyanin, alpha subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name phycocy_alpha;
tigrfam_sub1role Photosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01338 evalue:8.9e-86 score:285.0 best_domain_score:284.9 name:TIGR01338;
55526 56386 CDS
ID metaerg.pl|09437
allgo_ids GO:0030089; GO:0015979;
allko_ids K02286;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006199263.1 1 286 evalue:2.0e-153 qcov:100.00 identity:97.90;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF01383; PF00427;
pfam_desc CpcD/allophycocyanin linker domain; Phycobilisome Linker polypeptide;
pfam_id CpcD; PBS_linker_poly;
pfam_target db:Pfam-A.hmm|PF01383.21 evalue:2.3e-23 score:81.4 best_domain_score:81.4 name:CpcD; db:Pfam-A.hmm|PF00427.21 evalue:2.2e-50 score:169.2 best_domain_score:168.6 name:PBS_linker_poly;
sprot_desc Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod;
sprot_id sp|P07123|PYR1_NOSS1;
sprot_target db:uniprot_sprot|sp|P07123|PYR1_NOSS1 1 286 evalue:5.4e-137 qcov:100.00 identity:85.00;
56424 56669 CDS
ID metaerg.pl|09438
allgo_ids GO:0030089; GO:0015979;
allko_ids K02287;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091907.1 1 81 evalue:4.8e-36 qcov:100.00 identity:98.80;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF01383;
pfam_desc CpcD/allophycocyanin linker domain;
pfam_id CpcD;
pfam_target db:Pfam-A.hmm|PF01383.21 evalue:2.2e-27 score:94.3 best_domain_score:94.1 name:CpcD;
sprot_desc Phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod;
sprot_id sp|P07124|PYS1_NOSS1;
sprot_target db:uniprot_sprot|sp|P07124|PYS1_NOSS1 1 79 evalue:2.6e-28 qcov:97.50 identity:78.50;
56680 57510 CDS
ID metaerg.pl|09439
allec_ids 4.-.-.-;
allgo_ids GO:0005515; GO:0030089; GO:0016829;
allko_ids K02288;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804074.1 1 276 evalue:7.4e-145 qcov:100.00 identity:98.20;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id PWY1A0-6325;
metacyc_pathway_name actinorhodin biosynthesis;;
metacyc_pathway_type Antibiotic-Biosynthesis;;
pfam_acc PF00514; PF02985; PF13646; PF13513; PF03130;
pfam_desc Armadillo/beta-catenin-like repeat; HEAT repeat; HEAT repeats; HEAT-like repeat; PBS lyase HEAT-like repeat;
pfam_id Arm; HEAT; HEAT_2; HEAT_EZ; HEAT_PBS;
pfam_target db:Pfam-A.hmm|PF00514.23 evalue:4e-06 score:25.9 best_domain_score:8.3 name:Arm; db:Pfam-A.hmm|PF02985.22 evalue:3.1e-08 score:32.4 best_domain_score:8.3 name:HEAT; db:Pfam-A.hmm|PF13646.6 evalue:2.1e-27 score:94.6 best_domain_score:51.3 name:HEAT_2; db:Pfam-A.hmm|PF13513.6 evalue:6e-11 score:41.9 best_domain_score:19.2 name:HEAT_EZ; db:Pfam-A.hmm|PF03130.16 evalue:7.4e-24 score:81.2 best_domain_score:25.8 name:HEAT_PBS;
sprot_desc Phycocyanobilin lyase subunit alpha;
sprot_id sp|P07125|CPCE_NOSS1;
sprot_target db:uniprot_sprot|sp|P07125|CPCE_NOSS1 1 276 evalue:3.3e-99 qcov:100.00 identity:76.10;
57591 58187 CDS
ID metaerg.pl|09440
allec_ids 4.-.-.-;
allgo_ids GO:0005515; GO:0030089; GO:0016829;
allko_ids K02289;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198302.1 1 198 evalue:2.5e-94 qcov:100.00 identity:95.50;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id PWY1A0-6325;
metacyc_pathway_name actinorhodin biosynthesis;;
metacyc_pathway_type Antibiotic-Biosynthesis;;
pfam_acc PF02985; PF13646; PF03130;
pfam_desc HEAT repeat; HEAT repeats; PBS lyase HEAT-like repeat;
pfam_id HEAT; HEAT_2; HEAT_PBS;
pfam_target db:Pfam-A.hmm|PF02985.22 evalue:4.4e-08 score:32.0 best_domain_score:14.5 name:HEAT; db:Pfam-A.hmm|PF13646.6 evalue:5e-15 score:54.9 best_domain_score:35.2 name:HEAT_2; db:Pfam-A.hmm|PF03130.16 evalue:1.2e-11 score:43.4 best_domain_score:21.5 name:HEAT_PBS;
sprot_desc Phycocyanobilin lyase subunit beta;
sprot_id sp|P29985|CPCF_NOSS1;
sprot_target db:uniprot_sprot|sp|P29985|CPCF_NOSS1 1 197 evalue:3.2e-80 qcov:99.50 identity:79.70;
58283 59122 CDS
ID metaerg.pl|09441
allgo_ids GO:0015979; GO:0030089;
allko_ids K02290;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198301.1 1 279 evalue:2.2e-152 qcov:100.00 identity:96.10;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00427;
pfam_desc Phycobilisome Linker polypeptide;
pfam_id PBS_linker_poly;
pfam_target db:Pfam-A.hmm|PF00427.21 evalue:1.6e-46 score:156.6 best_domain_score:155.8 name:PBS_linker_poly;
sprot_desc Phycobilisome rod-core linker polypeptide CpcG1;
sprot_id sp|P29986|PYG1_NOSS1;
sprot_target db:uniprot_sprot|sp|P29986|PYG1_NOSS1 1 278 evalue:3.7e-130 qcov:99.60 identity:79.90;
59532 60275 CDS
ID metaerg.pl|09442
allgo_ids GO:0015979; GO:0030089;
allko_ids K00975; K02290;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198300.1 1 246 evalue:9.0e-134 qcov:99.60 identity:97.60;
kegg_pathway_id 00196; 00500;
kegg_pathway_name Photosynthesis - antenna proteins; Starch and sucrose metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00427;
pfam_desc Phycobilisome Linker polypeptide;
pfam_id PBS_linker_poly;
pfam_target db:Pfam-A.hmm|PF00427.21 evalue:5.6e-47 score:158.1 best_domain_score:157.7 name:PBS_linker_poly;
sprot_desc Phycobilisome rod-core linker polypeptide CpcG2;
sprot_id sp|P29987|PYG2_NOSS1;
sprot_target db:uniprot_sprot|sp|P29987|PYG2_NOSS1 1 246 evalue:1.4e-112 qcov:99.60 identity:78.50;
60415 61182 CDS
ID metaerg.pl|09443
allgo_ids GO:0015979; GO:0030089;
allko_ids K02290;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091912.1 1 255 evalue:1.1e-137 qcov:100.00 identity:95.70;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00427;
pfam_desc Phycobilisome Linker polypeptide;
pfam_id PBS_linker_poly;
pfam_target db:Pfam-A.hmm|PF00427.21 evalue:5.2e-48 score:161.5 best_domain_score:160.9 name:PBS_linker_poly;
sprot_desc Phycobilisome rod-core linker polypeptide CpcG4;
sprot_id sp|P29989|PYG4_NOSS1;
sprot_target db:uniprot_sprot|sp|P29989|PYG4_NOSS1 1 255 evalue:2.1e-124 qcov:100.00 identity:84.70;
61344 62585 CDS
ID metaerg.pl|09444
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__LE011-02;s__LE011-02 sp000312705;
genomedb_acc GCF_000312705.1;
genomedb_target db:genomedb|GCF_000312705.1|WP_015080648.1 1 411 evalue:1.7e-214 qcov:99.50 identity:86.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF13175; PF13304; PF13476;
pfam_desc AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain;
pfam_id AAA_15; AAA_21; AAA_23;
pfam_target db:Pfam-A.hmm|PF13175.6 evalue:1.5e-18 score:66.9 best_domain_score:52.4 name:AAA_15; db:Pfam-A.hmm|PF13304.6 evalue:5.6e-28 score:97.9 best_domain_score:93.2 name:AAA_21; db:Pfam-A.hmm|PF13476.6 evalue:1.9e-06 score:27.7 best_domain_score:26.8 name:AAA_23;
62603 63169 CDS
ID metaerg.pl|09445
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091914.1 1 188 evalue:9.3e-99 qcov:100.00 identity:92.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
64047 63388 CDS
ID metaerg.pl|09446
allko_ids K01494;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091915.1 1 219 evalue:1.5e-95 qcov:100.00 identity:80.80;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
tm_num 1;
64047 63388 transmembrane_helix
ID metaerg.pl|09447
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i63970-64038o;
65130 64240 CDS
ID metaerg.pl|09448
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091916.1 1 296 evalue:1.3e-163 qcov:100.00 identity:95.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF03819; PF18722;
pfam_desc MazG nucleotide pyrophosphohydrolase domain; MazG C-terminal domain;
pfam_id MazG; MazG_C;
pfam_target db:Pfam-A.hmm|PF03819.17 evalue:5.4e-07 score:28.9 best_domain_score:28.1 name:MazG; db:Pfam-A.hmm|PF18722.1 evalue:5.1e-79 score:263.5 best_domain_score:263.0 name:MazG_C;
65857 65357 CDS
ID metaerg.pl|09449
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Dolichospermum_A;s__Dolichospermum_A compactum;
genomedb_acc GCF_002368115.1;
genomedb_target db:genomedb|GCF_002368115.1|WP_096663669.1 1 164 evalue:3.3e-71 qcov:98.80 identity:78.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF07799;
pfam_desc Protein of unknown function (DUF1643);
pfam_id DUF1643;
pfam_target db:Pfam-A.hmm|PF07799.12 evalue:3.3e-45 score:152.8 best_domain_score:152.6 name:DUF1643;
67087 65903 CDS
ID metaerg.pl|09450
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091918.1 1 394 evalue:5.3e-213 qcov:100.00 identity:92.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF18723;
pfam_desc alpha-glutamyl/putrescinyl thymine pyrophosphorylase clade 1;
pfam_id aGPT-Pplase1;
pfam_target db:Pfam-A.hmm|PF18723.1 evalue:8e-109 score:362.6 best_domain_score:362.2 name:aGPT-Pplase1;
68018 67212 CDS
ID metaerg.pl|09451
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198296.1 1 268 evalue:1.3e-130 qcov:100.00 identity:93.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00805; PF13576; PF13599;
pfam_desc Pentapeptide repeats (8 copies); Pentapeptide repeats (9 copies); Pentapeptide repeats (9 copies);
pfam_id Pentapeptide; Pentapeptide_3; Pentapeptide_4;
pfam_target db:Pfam-A.hmm|PF00805.22 evalue:1.5e-71 score:234.7 best_domain_score:51.0 name:Pentapeptide; db:Pfam-A.hmm|PF13576.6 evalue:5.1e-25 score:86.6 best_domain_score:24.8 name:Pentapeptide_3; db:Pfam-A.hmm|PF13599.6 evalue:3.4e-43 score:144.9 best_domain_score:38.0 name:Pentapeptide_4;
68670 68029 CDS
ID metaerg.pl|09452
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091920.1 1 213 evalue:8.9e-106 qcov:100.00 identity:95.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00936;
pfam_desc BMC domain;
pfam_id BMC;
pfam_target db:Pfam-A.hmm|PF00936.19 evalue:1e-06 score:27.8 best_domain_score:13.9 name:BMC;
69999 69019 CDS
ID metaerg.pl|09453
allec_ids 1.1.-.-;
allgo_ids GO:0005783; GO:0005743; GO:0005739; GO:0016491;
allko_ids K11163;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091922.1 1 325 evalue:2.5e-168 qcov:99.70 identity:93.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id GAMMAHEXCHLORDEG-PWY;
metacyc_pathway_name γ-hexachlorocyclohexane degradation;;
metacyc_pathway_type CHLORINATED-COMPOUNDS-DEG;;
pfam_acc PF00106; PF13561;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase;
pfam_id adh_short; adh_short_C2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:3e-31 score:107.6 best_domain_score:106.3 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:5.7e-23 score:80.9 best_domain_score:80.3 name:adh_short_C2;
sprot_desc Dehydrogenase/reductase SDR family member 1;
sprot_id sp|Q99L04|DHRS1_MOUSE;
sprot_target db:uniprot_sprot|sp|Q99L04|DHRS1_MOUSE 4 306 evalue:7.9e-60 qcov:92.90 identity:40.60;
70231 73212 CDS
ID metaerg.pl|09454
allec_ids 1.2.1.88;
allgo_ids GO:0016491; GO:0055114;
allko_ids K00318; K13821; K00294;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198289.1 1 993 evalue:0.0e+00 qcov:100.00 identity:94.80;
kegg_pathway_id 00251; 00330;
kegg_pathway_name Glutamate metabolism; Arginine and proline metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00171; PF01619; PF18083;
pfam_desc Aldehyde dehydrogenase family; Proline dehydrogenase; Proline utilization A N-terminal domain;
pfam_id Aldedh; Pro_dh; PutA_N;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:4.9e-156 score:519.1 best_domain_score:518.5 name:Aldedh; db:Pfam-A.hmm|PF01619.18 evalue:4.2e-98 score:327.8 best_domain_score:326.9 name:Pro_dh; db:Pfam-A.hmm|PF18083.1 evalue:2.7e-36 score:123.3 best_domain_score:121.3 name:PutA_N;
tigrfam_acc TIGR01237;
tigrfam_desc putative delta-1-pyrroline-5-carboxylate dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name D1pyr5carbox2;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01237 evalue:2.5e-241 score:801.0 best_domain_score:800.5 name:TIGR01237;
73796 73416 CDS
ID metaerg.pl|09455
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198288.1 1 126 evalue:1.2e-57 qcov:100.00 identity:96.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF04241;
pfam_desc Protein of unknown function (DUF423);
pfam_id DUF423;
pfam_target db:Pfam-A.hmm|PF04241.15 evalue:3.1e-33 score:113.1 best_domain_score:113.1 name:DUF423;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|Q8CTQ5|Y353_STAES;
sprot_target db:uniprot_sprot|sp|Q8CTQ5|Y353_STAES 3 126 evalue:3.4e-19 qcov:98.40 identity:43.50;
tm_num 4;
73416 73484 signal_peptide
ID metaerg.pl|09456
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
73796 73416 transmembrane_helix
ID metaerg.pl|09457
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i73428-73496o73539-73598i73635-73703o73716-73784i;
74303 73815 CDS
ID metaerg.pl|09458
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091925.1 1 162 evalue:1.1e-71 qcov:100.00 identity:84.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
sp YES;
tm_num 2;
73815 73892 signal_peptide
ID metaerg.pl|09459
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
74303 73815 transmembrane_helix
ID metaerg.pl|09460
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i73833-73892o74007-74066i;
74797 74375 CDS
ID metaerg.pl|09461
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091926.1 1 140 evalue:1.0e-65 qcov:100.00 identity:90.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
sp YES;
tm_num 2;
74375 74470 signal_peptide
ID metaerg.pl|09462
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
74797 74375 transmembrane_helix
ID metaerg.pl|09463
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i74393-74452o74510-74578i;
75528 74842 CDS
ID metaerg.pl|09464
allec_ids 2.1.1.11;
allgo_ids GO:0008168; GO:0046406; GO:0036068; GO:0015979;
allko_ids K03215; K00599; K03428;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091927.1 1 228 evalue:1.1e-122 qcov:100.00 identity:97.80;
kegg_pathway_id 00350; 00380; 00340; 00150; 00450; 00860; 00626;
kegg_pathway_name Tyrosine metabolism; Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism; Selenoamino acid metabolism; Porphyrin and chlorophyll metabolism; Naphthalene and anthracene degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id PWY-5529; PWY-5531; CHLOROPHYLL-SYN;
metacyc_pathway_name superpathway of bacteriochlorophyll a biosynthesis;; 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);;
metacyc_pathway_type Chlorophyll-a-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; Chlorophyllide-a-Biosynthesis;;
pfam_acc PF08241; PF08242; PF13489; PF13649; PF13847; PF07109; PF06325;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Magnesium-protoporphyrin IX methyltransferase C-terminus; Ribosomal protein L11 methyltransferase (PrmA);
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; Mg-por_mtran_C; PrmA;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:2.6e-08 score:33.6 best_domain_score:32.7 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1e-11 score:44.7 best_domain_score:43.3 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:3.6e-10 score:39.1 best_domain_score:38.5 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:2.9e-13 score:49.6 best_domain_score:48.7 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:2.1e-10 score:39.9 best_domain_score:39.6 name:Methyltransf_31; db:Pfam-A.hmm|PF07109.11 evalue:1.6e-38 score:130.2 best_domain_score:129.5 name:Mg-por_mtran_C; db:Pfam-A.hmm|PF06325.13 evalue:0.00011 score:20.9 best_domain_score:20.4 name:PrmA;
sprot_desc Magnesium-protoporphyrin O-methyltransferase;
sprot_id sp|Q55467|CHLM_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55467|CHLM_SYNY3 5 227 evalue:2.9e-85 qcov:97.80 identity:69.50;
tigrfam_acc TIGR02021;
tigrfam_desc magnesium protoporphyrin O-methyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name BchM-ChlM;
tigrfam_sub1role Chlorophyll and bacteriochlorphyll;
tigrfam_target db:TIGRFAMs.hmm|TIGR02021 evalue:3.7e-77 score:257.8 best_domain_score:257.6 name:TIGR02021;
75954 78032 CDS
ID metaerg.pl|09465
allgo_ids GO:0006812; GO:0015299; GO:0016021; GO:0055085; GO:0006814;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091928.1 1 692 evalue:0.0e+00 qcov:100.00 identity:94.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00999; PF00582;
pfam_desc Sodium/hydrogen exchanger family; Universal stress protein family;
pfam_id Na_H_Exchanger; Usp;
pfam_target db:Pfam-A.hmm|PF00999.21 evalue:3.5e-57 score:193.2 best_domain_score:192.8 name:Na_H_Exchanger; db:Pfam-A.hmm|PF00582.26 evalue:1.7e-22 score:79.7 best_domain_score:58.4 name:Usp;
sprot_desc Na(+)/H(+) antiporter NhaS5;
sprot_id sp|Q55736|NHAS5_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55736|NHAS5_SYNY3 8 691 evalue:1.3e-205 qcov:98.80 identity:55.90;
tm_num 10;
75954 78032 transmembrane_helix
ID metaerg.pl|09466
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology o75981-76034i76224-76292o76302-76370i76404-76472o76485-76553i76611-76670o76746-76814i76833-76901o76938-77006i77043-77111o;
79237 78077 CDS
ID metaerg.pl|09467
allec_ids 3.5.1.25;
allgo_ids GO:0046872; GO:0047419; GO:0008448; GO:0005975; GO:0006046;
allko_ids K01443;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091932.1 1 386 evalue:2.1e-201 qcov:100.00 identity:91.20;
kegg_pathway_id 00530;
kegg_pathway_name Aminosugars metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id P441-PWY; PWY-6517; GLUAMCAT-PWY;
metacyc_pathway_name superpathway of N-acetylneuraminate degradation;; N-acetylglucosamine degradation II;; N-acetylglucosamine degradation I;;
metacyc_pathway_type CARBOXYLATES-DEG; Super-Pathways;; N-Acetylglucosamine-Degradation; Super-Pathways;; N-Acetylglucosamine-Degradation;;
sprot_desc N-acetylglucosamine-6-phosphate deacetylase;
sprot_id sp|Q9VR81|NAGA_DROME;
sprot_target db:uniprot_sprot|sp|Q9VR81|NAGA_DROME 50 356 evalue:1.3e-45 qcov:79.50 identity:39.40;
tigrfam_acc TIGR00221;
tigrfam_desc N-acetylglucosamine-6-phosphate deacetylase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name nagA;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR00221 evalue:1.2e-79 score:267.2 best_domain_score:266.8 name:TIGR00221;
79283 79804 CDS
ID metaerg.pl|09468
allec_ids 5.4.99.18; 4.1.1.21;
allgo_ids GO:0006189; GO:0034023;
allko_ids K11808; K01588;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091933.1 1 173 evalue:1.1e-80 qcov:100.00 identity:94.80;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6124; PRPP-PWY; PWY-6123; PWY-841;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; inosine-5'-phosphate biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; inosine-5'-phosphate biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis I;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;; Super-Pathways;; IMP-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00731;
pfam_desc AIR carboxylase;
pfam_id AIRC;
pfam_target db:Pfam-A.hmm|PF00731.20 evalue:6.5e-69 score:229.4 best_domain_score:229.2 name:AIRC;
sprot_desc N5-carboxyaminoimidazole ribonucleotide mutase;
sprot_id sp|Q55498|PURE_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55498|PURE_SYNY3 2 171 evalue:1.1e-68 qcov:98.30 identity:79.40;
tigrfam_acc TIGR01162;
tigrfam_desc phosphoribosylaminoimidazole carboxylase, catalytic subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purE;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01162 evalue:2.7e-70 score:234.0 best_domain_score:233.8 name:TIGR01162;
80496 82070 CDS
ID metaerg.pl|09469
allgo_ids GO:0008519; GO:0015696; GO:0016020; GO:0016021; GO:0005886;
allko_ids K03320;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091934.1 1 524 evalue:3.3e-279 qcov:100.00 identity:94.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00909;
pfam_desc Ammonium Transporter Family;
pfam_id Ammonium_transp;
pfam_target db:Pfam-A.hmm|PF00909.21 evalue:4.5e-126 score:420.0 best_domain_score:419.6 name:Ammonium_transp;
sprot_desc Putative ammonium transporter sll0108;
sprot_id sp|P54147|Y108_SYNY3;
sprot_target db:uniprot_sprot|sp|P54147|Y108_SYNY3 31 509 evalue:2.9e-152 qcov:91.40 identity:60.90;
tigrfam_acc TIGR00836;
tigrfam_desc ammonium transporter;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name amt;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR00836 evalue:4.2e-129 score:430.2 best_domain_score:429.9 name:TIGR00836;
tm_num 12;
80496 82070 transmembrane_helix
ID metaerg.pl|09470
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
topology i80607-80675o80718-80786i80847-80915o81015-81083i81120-81188o81231-81284i81321-81389o81447-81515i81528-81596o81606-81659i81696-81764o81840-81908i;
82315 83073 CDS
ID metaerg.pl|09471
allgo_ids GO:0016788;
allko_ids K01062;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091935.1 1 252 evalue:8.9e-129 qcov:100.00 identity:91.30;
kegg_pathway_id 00565;
kegg_pathway_name Ether lipid metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
pfam_acc PF00657; PF13472;
pfam_desc GDSL-like Lipase/Acylhydrolase; GDSL-like Lipase/Acylhydrolase family;
pfam_id Lipase_GDSL; Lipase_GDSL_2;
pfam_target db:Pfam-A.hmm|PF00657.22 evalue:3.5e-12 score:45.9 best_domain_score:45.6 name:Lipase_GDSL; db:Pfam-A.hmm|PF13472.6 evalue:2.9e-24 score:85.7 best_domain_score:85.0 name:Lipase_GDSL_2;
83189 84424 CDS
ID metaerg.pl|09472
allec_ids 1.17.7.4; 1.17.1.2;
allgo_ids GO:0019288; GO:0046872; GO:0050992; GO:0051745; GO:0051539; GO:0016114;
allko_ids K03527;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091936.1 1 411 evalue:2.9e-222 qcov:100.00 identity:94.60;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 69.5036; 0.0157355; 69.4636; ; 0.0243132;
metacyc_pathway_id PWY-5121; NONMEVIPP-PWY; PWY-6270;
metacyc_pathway_name superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; methylerythritol phosphate pathway I;; isoprene biosynthesis I;;
metacyc_pathway_type DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; MEP-Pathways;; ISOPRENOIDS; Super-Pathways;;
pfam_acc PF02401;
pfam_desc LytB protein;
pfam_id LYTB;
pfam_target db:Pfam-A.hmm|PF02401.18 evalue:1.6e-83 score:279.3 best_domain_score:279.0 name:LYTB;
sprot_desc 4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
sprot_id sp|B2IZV5|ISPH_NOSP7;
sprot_target db:uniprot_sprot|sp|B2IZV5|ISPH_NOSP7 1 406 evalue:5.6e-204 qcov:98.80 identity:86.00;
tigrfam_acc TIGR00216;
tigrfam_desc 4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ispH_lytB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00216 evalue:2.1e-95 score:318.3 best_domain_score:317.9 name:TIGR00216;
>Feature NODE_67_length_84560_cov_32.9165
210 3086 CDS
ID metaerg.pl|09473
allec_ids 3.1.25.-;
allgo_ids GO:0005524; GO:0016887; GO:0005737; GO:0009380; GO:0003677; GO:0009381; GO:0008270; GO:0006289; GO:0009432;
allko_ids K02023; K06861; K01996; K02045; K02006; K03701;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725932.1 4 958 evalue:0.0e+00 qcov:99.70 identity:88.50;
kegg_pathway_id 02010; 03420;
kegg_pathway_name ABC transporters - General; Nucleotide excision repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF13555; PF00005; PF17755; PF17760;
pfam_desc P-loop containing region of AAA domain; ABC transporter; UvrA DNA-binding domain; UvrA interaction domain;
pfam_id AAA_29; ABC_tran; UvrA_DNA-bind; UvrA_inter;
pfam_target db:Pfam-A.hmm|PF13555.6 evalue:3.4e-08 score:32.3 best_domain_score:18.3 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:1.9e-21 score:76.2 best_domain_score:39.8 name:ABC_tran; db:Pfam-A.hmm|PF17755.1 evalue:1.1e-37 score:128.0 best_domain_score:119.4 name:UvrA_DNA-bind; db:Pfam-A.hmm|PF17760.1 evalue:7.6e-34 score:115.3 best_domain_score:113.9 name:UvrA_inter;
sprot_desc UvrABC system protein A;
sprot_id sp|Q8PBH3|UVRA_XANCP;
sprot_target db:uniprot_sprot|sp|Q8PBH3|UVRA_XANCP 4 957 evalue:0.0e+00 qcov:99.60 identity:71.90;
tigrfam_acc TIGR00630;
tigrfam_desc excinuclease ABC subunit A;
tigrfam_mainrole DNA metabolism;
tigrfam_name uvra;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00630 evalue:0 score:1455.7 best_domain_score:1455.5 name:TIGR00630;
3736 3122 CDS
ID metaerg.pl|09474
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725933.1 24 196 evalue:4.6e-43 qcov:84.80 identity:58.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF02517;
pfam_desc CPBP intramembrane metalloprotease;
pfam_id CPBP;
pfam_target db:Pfam-A.hmm|PF02517.16 evalue:6e-20 score:70.7 best_domain_score:70.7 name:CPBP;
tm_num 5;
3736 3122 transmembrane_helix
ID metaerg.pl|09475
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology i3194-3262o3290-3349i3407-3475o3533-3601i3620-3688o;
3752 4165 CDS
ID metaerg.pl|09476
allgo_ids GO:0006633; GO:0016790;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169906.1 4 135 evalue:3.8e-57 qcov:96.40 identity:80.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF03061; PF13279; PF01643;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily; Acyl-ACP thioesterase;
pfam_id 4HBT; 4HBT_2; Acyl-ACP_TE;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:1.5e-13 score:50.1 best_domain_score:49.6 name:4HBT; db:Pfam-A.hmm|PF13279.6 evalue:2.7e-16 score:59.4 best_domain_score:59.2 name:4HBT_2; db:Pfam-A.hmm|PF01643.17 evalue:9e-09 score:34.2 best_domain_score:26.6 name:Acyl-ACP_TE;
4484 4170 CDS
ID metaerg.pl|09477
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725935.1 1 104 evalue:9.3e-32 qcov:100.00 identity:67.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
5362 4607 CDS
ID metaerg.pl|09478
allec_ids 4.2.1.17;
allgo_ids GO:0003824; GO:0004300; GO:0006631;
allko_ids K07516; K01782; K01692; K00022; K13767; K15016; K07514; K01825; K10527; K07515;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725936.1 1 250 evalue:2.4e-89 qcov:99.60 identity:68.80;
kegg_pathway_id 00071; 00592; 00410; 00640; 00650; 00903; 00062; 01040; 00632; 00930; 00380; 00310; 00281; 00280;
kegg_pathway_name Fatty acid metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Propanoate metabolism; Butanoate metabolism; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids; Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-5136; FAO-PWY; ILEUDEG-PWY; P3-PWY; PWY-5138; VALDEG-PWY; PWY-6435; PWY-561;
metacyc_pathway_name fatty acid β-oxidation II (peroxisome);; fatty acid β-oxidation I;; L-isoleucine degradation I;; gallate degradation III (anaerobic);; unsaturated, even numbered fatty acid β-oxidation;; L-valine degradation I;; 4-hydroxybenzoate biosynthesis III (plants);; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Fatty-Acid-Degradation;; Fatty-Acid-Degradation;; ISOLEUCINE-DEG;; GALLATE-DEG;; Fatty-Acid-Degradation;; VALINE-DEG;; 4-Hydroxybenzoate-Biosynthesis;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:2e-42 score:144.5 best_domain_score:144.4 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:4.5e-15 score:55.2 best_domain_score:55.0 name:ECH_2;
sprot_desc Probable enoyl-CoA hydratase echA17;
sprot_id sp|A0QJH8|ECH17_MYCA1;
sprot_target db:uniprot_sprot|sp|A0QJH8|ECH17_MYCA1 14 227 evalue:4.7e-20 qcov:85.30 identity:35.30;
5518 5982 CDS
ID metaerg.pl|09479
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169646.1 10 152 evalue:7.1e-36 qcov:92.90 identity:55.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF04314;
pfam_desc Copper chaperone PCu(A)C;
pfam_id PCuAC;
pfam_target db:Pfam-A.hmm|PF04314.13 evalue:7.2e-35 score:118.3 best_domain_score:118.0 name:PCuAC;
sp YES;
5518 5601 signal_peptide
ID metaerg.pl|09480
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
6032 7507 CDS
ID metaerg.pl|09481
allgo_ids GO:0006812; GO:0015299; GO:0016021; GO:0055085; GO:0005887; GO:0050660; GO:0015386; GO:0006884;
allko_ids K11105;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725938.1 1 491 evalue:1.7e-221 qcov:100.00 identity:83.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00999; PF02080;
pfam_desc Sodium/hydrogen exchanger family; TrkA-C domain;
pfam_id Na_H_Exchanger; TrkA_C;
pfam_target db:Pfam-A.hmm|PF00999.21 evalue:3.2e-46 score:157.1 best_domain_score:156.8 name:Na_H_Exchanger; db:Pfam-A.hmm|PF02080.21 evalue:6.3e-08 score:31.6 best_domain_score:30.8 name:TrkA_C;
sprot_desc K(+)/H(+) antiporter NhaP2;
sprot_id sp|Q02EZ6|NHAP2_PSEAB;
sprot_target db:uniprot_sprot|sp|Q02EZ6|NHAP2_PSEAB 18 485 evalue:2.1e-80 qcov:95.30 identity:43.50;
tm_num 10;
6032 7507 transmembrane_helix
ID metaerg.pl|09482
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology o6059-6112i6131-6184o6212-6280i6314-6382o6608-6676i6734-6802o6860-6928i6947-7015o7043-7111i7130-7198o;
8144 7515 CDS
ID metaerg.pl|09483
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725939.1 11 202 evalue:3.8e-40 qcov:91.90 identity:48.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:8e-09 score:34.9 best_domain_score:34.1 name:NUDIX;
9065 8343 CDS
ID metaerg.pl|09484
allgo_ids GO:0006457;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169647.1 1 236 evalue:1.2e-101 qcov:98.30 identity:79.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00254; PF01346;
pfam_desc FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase;
pfam_id FKBP_C; FKBP_N;
pfam_target db:Pfam-A.hmm|PF00254.28 evalue:4e-19 score:68.0 best_domain_score:66.7 name:FKBP_C; db:Pfam-A.hmm|PF01346.18 evalue:7.8e-21 score:74.1 best_domain_score:73.6 name:FKBP_N;
sp YES;
8343 8402 signal_peptide
ID metaerg.pl|09485
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
9441 10106 CDS
ID metaerg.pl|09486
allgo_ids GO:0005737; GO:0005886;
allko_ids K03969;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725941.1 1 218 evalue:2.4e-93 qcov:98.60 identity:85.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF04012;
pfam_desc PspA/IM30 family;
pfam_id PspA_IM30;
pfam_target db:Pfam-A.hmm|PF04012.12 evalue:1.8e-36 score:125.0 best_domain_score:124.9 name:PspA_IM30;
sprot_desc Phage shock protein A;
sprot_id sp|P0AFM7|PSPA_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFM7|PSPA_ECO57 1 219 evalue:1.2e-40 qcov:99.10 identity:45.20;
tigrfam_acc TIGR02977;
tigrfam_desc phage shock protein A;
tigrfam_mainrole Cellular processes;
tigrfam_name phageshock_pspA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02977 evalue:5.3e-81 score:270.7 best_domain_score:270.5 name:TIGR02977;
10108 10371 CDS
ID metaerg.pl|09487
allgo_ids GO:0006355; GO:0009271;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725942.1 16 86 evalue:1.3e-23 qcov:81.60 identity:81.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF06667;
pfam_desc Phage shock protein B;
pfam_id PspB;
pfam_target db:Pfam-A.hmm|PF06667.12 evalue:1.8e-31 score:107.2 best_domain_score:106.9 name:PspB;
tigrfam_acc TIGR02976;
tigrfam_desc phage shock protein B;
tigrfam_mainrole Cellular processes;
tigrfam_name phageshock_pspB;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02976 evalue:4.2e-27 score:93.4 best_domain_score:93.3 name:TIGR02976;
tm_num 1;
10108 10371 transmembrane_helix
ID metaerg.pl|09488
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology o10150-10218i;
10368 10757 CDS
ID metaerg.pl|09489
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169648.1 11 129 evalue:8.2e-46 qcov:92.20 identity:74.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF04024;
pfam_desc PspC domain;
pfam_id PspC;
pfam_target db:Pfam-A.hmm|PF04024.12 evalue:1.4e-16 score:59.2 best_domain_score:58.8 name:PspC;
tigrfam_acc TIGR02978;
tigrfam_desc phage shock protein C;
tigrfam_mainrole Cellular processes;
tigrfam_name phageshock_pspC;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02978 evalue:1.2e-32 score:111.5 best_domain_score:111.3 name:TIGR02978;
tm_num 2;
10368 10757 transmembrane_helix
ID metaerg.pl|09490
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology i10428-10487o10497-10565i;
10767 11039 CDS
ID metaerg.pl|09491
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
tm_num 2;
10767 11039 transmembrane_helix
ID metaerg.pl|09492
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology i10785-10853o10944-11012i;
11057 11839 CDS
ID metaerg.pl|09493
allec_ids 4.2.1.116;
allgo_ids GO:0003824; GO:0043956; GO:0006631;
allko_ids K15016; K13816; K13767; K01692; K00022; K01782; K01715; K07516; K10527; K01825; K07515; K07511; K07514; K15019;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725945.1 1 260 evalue:5.8e-115 qcov:100.00 identity:85.00;
kegg_pathway_id 00640; 00650; 00071; 00592; 00410; 01040; 00903; 00062; 00632; 00930; 00380; 00310; 00280; 00281;
kegg_pathway_name Propanoate metabolism; Butanoate metabolism; Fatty acid metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-4221; PWY-5789; PWY-5743; PWY-3941;
metacyc_pathway_name superpathway of coenzyme A biosynthesis II (plants);; 3-hydroxypropanoate/4-hydroxybutanate cycle;; 3-hydroxypropanoate cycle;; β-alanine biosynthesis II;;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;; Autotrophic-CO2-Fixation;; Beta-Alanine-Biosynthesis;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:1.1e-70 score:237.1 best_domain_score:236.8 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:3.6e-41 score:141.0 best_domain_score:132.0 name:ECH_2;
sprot_desc 3-hydroxypropionyl-coenzyme A dehydratase;
sprot_id sp|A4YI89|HPCD_METS5;
sprot_target db:uniprot_sprot|sp|A4YI89|HPCD_METS5 1 260 evalue:2.3e-62 qcov:100.00 identity:49.60;
12870 11935 CDS
ID metaerg.pl|09494
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725948.1 1 303 evalue:9.7e-93 qcov:97.40 identity:54.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF07920;
pfam_desc Protein of unknown function (DUF1684);
pfam_id DUF1684;
pfam_target db:Pfam-A.hmm|PF07920.11 evalue:1.1e-41 score:141.7 best_domain_score:141.0 name:DUF1684;
sp YES;
11935 11997 lipoprotein_signal_peptide
ID metaerg.pl|09495
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
14272 12857 CDS
ID metaerg.pl|09496
allec_ids 5.3.1.8; 2.7.7.13; 5.3.1.8 2.7.7.13;
allgo_ids GO:0005976; GO:0016779; GO:0005525; GO:0004475; GO:0004476; GO:0009298; GO:0009103;
allko_ids K01840; K00971; K02536; K04042; K11528; K00966; K01809; K16011;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725949.1 2 471 evalue:4.3e-225 qcov:99.80 identity:82.10;
kegg_pathway_id 00530; 00540; 00051;
kegg_pathway_name Aminosugars metabolism; Lipopolysaccharide biosynthesis; Fructose and mannose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-5659; COLANSYN-PWY; PWY-882; MANNCAT-PWY;
metacyc_pathway_name GDP-mannose biosynthesis;; colanic acid building blocks biosynthesis;; L-ascorbate biosynthesis I (L-galactose pathway);; D-mannose degradation;;
metacyc_pathway_type GDP-Sugar-Biosynthesis;; Carbohydrates-Biosynthesis; Super-Pathways;; Ascorbate-Biosynthesis;; Sugars-And-Polysaccharides-Degradation;;
pfam_acc PF07883; PF01050; PF00483; PF12804;
pfam_desc Cupin domain; Mannose-6-phosphate isomerase; Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id Cupin_2; MannoseP_isomer; NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF07883.11 evalue:8.2e-12 score:43.9 best_domain_score:42.5 name:Cupin_2; db:Pfam-A.hmm|PF01050.18 evalue:4.5e-60 score:201.1 best_domain_score:200.4 name:MannoseP_isomer; db:Pfam-A.hmm|PF00483.23 evalue:4.2e-55 score:186.2 best_domain_score:185.3 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:5.8e-10 score:39.0 best_domain_score:39.0 name:NTP_transf_3;
sprot_desc Xanthan biosynthesis protein XanB;
sprot_id sp|P0C7J3|XANB_XANCP;
sprot_target db:uniprot_sprot|sp|P0C7J3|XANB_XANCP 2 470 evalue:1.3e-119 qcov:99.60 identity:48.20;
tigrfam_acc TIGR01479;
tigrfam_desc mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;
tigrfam_mainrole Cell envelope;
tigrfam_name GMP_PMI;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01479 evalue:2e-167 score:556.8 best_domain_score:556.7 name:TIGR01479;
15162 14266 CDS
ID metaerg.pl|09497
allec_ids 1.1.1.133;
allgo_ids GO:0003824; GO:0050662; GO:0008831; GO:0046872; GO:0019305; GO:0009243;
allko_ids K00067;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169649.1 1 297 evalue:4.8e-97 qcov:99.70 identity:62.00;
kegg_pathway_id 00520; 00523; 00521;
kegg_pathway_name Nucleotide sugars metabolism; Polyketide sugar unit biosynthesis; Streptomycin biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id DTDPRHAMSYN-PWY; OANTIGEN-PWY; PWY-6404;
metacyc_pathway_name dTDP-L-rhamnose biosynthesis;; O-antigen building blocks biosynthesis (E. coli);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type dTDP-Sugar-Biosynthesis;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF01370; PF16363; PF04321;
pfam_desc NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; RmlD substrate binding domain;
pfam_id Epimerase; GDP_Man_Dehyd; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01370.21 evalue:1.8e-20 score:72.7 best_domain_score:72.2 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:1.3e-07 score:30.6 best_domain_score:28.4 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF04321.17 evalue:9.3e-88 score:293.3 best_domain_score:293.1 name:RmlD_sub_bind;
sprot_desc dTDP-4-dehydrorhamnose reductase;
sprot_id sp|Q2SYI1|RMLD_BURTA;
sprot_target db:uniprot_sprot|sp|Q2SYI1|RMLD_BURTA 1 290 evalue:5.8e-41 qcov:97.30 identity:35.50;
tigrfam_acc TIGR01214;
tigrfam_desc dTDP-4-dehydrorhamnose reductase;
tigrfam_mainrole Cell envelope;
tigrfam_name rmlD;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01214 evalue:2.1e-84 score:282.1 best_domain_score:282.0 name:TIGR01214;
15707 15159 CDS
ID metaerg.pl|09498
allec_ids 5.1.3.13;
allgo_ids GO:0008830; GO:0019305; GO:0045226; GO:0009103; GO:0009244;
allko_ids K01790;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter spongiicola;
genomedb_acc GCF_900167055.1;
genomedb_target db:genomedb|GCF_900167055.1|WP_078758981.1 1 181 evalue:1.7e-65 qcov:99.50 identity:66.30;
kegg_pathway_id 00520; 00523; 00521;
kegg_pathway_name Nucleotide sugars metabolism; Polyketide sugar unit biosynthesis; Streptomycin biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id DTDPRHAMSYN-PWY; OANTIGEN-PWY; PWY-6404;
metacyc_pathway_name dTDP-L-rhamnose biosynthesis;; O-antigen building blocks biosynthesis (E. coli);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type dTDP-Sugar-Biosynthesis;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF00908;
pfam_desc dTDP-4-dehydrorhamnose 3,5-epimerase;
pfam_id dTDP_sugar_isom;
pfam_target db:Pfam-A.hmm|PF00908.17 evalue:1.4e-67 score:225.8 best_domain_score:225.6 name:dTDP_sugar_isom;
sprot_desc dTDP-4-dehydrorhamnose 3,5-epimerase;
sprot_id sp|Q9HU21|RMLC_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HU21|RMLC_PSEAE 1 166 evalue:2.6e-44 qcov:91.20 identity:54.80;
tigrfam_acc TIGR01221;
tigrfam_desc dTDP-4-dehydrorhamnose 3,5-epimerase;
tigrfam_mainrole Cell envelope;
tigrfam_name rmlC;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01221 evalue:1e-67 score:226.5 best_domain_score:226.3 name:TIGR01221;
16588 15704 CDS
ID metaerg.pl|09499
allec_ids 2.7.7.24;
allgo_ids GO:0009058; GO:0016779; GO:0008879; GO:0046872; GO:0019305; GO:0045226; GO:0009243;
allko_ids K00640; K00677; K00975; K01840; K04042; K02536; K00963; K11528; K00966; K00972; K00973;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725952.1 1 289 evalue:2.0e-148 qcov:98.30 identity:87.90;
kegg_pathway_id 00520; 00920; 00523; 00540; 00521; 00272; 00500; 00051; 00052; 00040; 00530;
kegg_pathway_name Nucleotide sugars metabolism; Sulfur metabolism; Polyketide sugar unit biosynthesis; Lipopolysaccharide biosynthesis; Streptomycin biosynthesis; Cysteine metabolism; Starch and sucrose metabolism; Fructose and mannose metabolism; Galactose metabolism; Pentose and glucuronate interconversions; Aminosugars metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-6404; OANTIGEN-PWY; DTDPRHAMSYN-PWY; ECASYN-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; O-antigen building blocks biosynthesis (E. coli);; dTDP-L-rhamnose biosynthesis;; enterobacterial common antigen biosynthesis;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; dTDP-Sugar-Biosynthesis;; Lipopolysaccharide-Biosynthesis; Super-Pathways;;
pfam_acc PF00483; PF12804;
pfam_desc Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF00483.23 evalue:4.8e-71 score:238.5 best_domain_score:238.2 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:1.7e-11 score:44.0 best_domain_score:43.6 name:NTP_transf_3;
sprot_desc Glucose-1-phosphate thymidylyltransferase;
sprot_id sp|B0RVK9|RMLA_XANCB;
sprot_target db:uniprot_sprot|sp|B0RVK9|RMLA_XANCB 3 289 evalue:3.3e-121 qcov:97.60 identity:70.00;
tigrfam_acc TIGR01207;
tigrfam_desc glucose-1-phosphate thymidylyltransferase;
tigrfam_mainrole Cell envelope;
tigrfam_name rmlA;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01207 evalue:1e-146 score:486.7 best_domain_score:486.5 name:TIGR01207;
17694 16633 CDS
ID metaerg.pl|09500
allec_ids 4.2.1.46;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0008460; GO:0019305; GO:0045226; GO:0009103; GO:0009243;
allko_ids K00329; K03953; K01711; K01784; K00356; K01710;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725953.1 1 353 evalue:6.1e-176 qcov:100.00 identity:85.60;
kegg_pathway_id 00130; 05012; 00190; 00052; 00051; 01055; 00521; 00523; 00520;
kegg_pathway_name Ubiquinone biosynthesis; Parkinson's disease; Oxidative phosphorylation; Galactose metabolism; Fructose and mannose metabolism; Biosynthesis of vancomycin group antibiotics; Streptomycin biosynthesis; Polyketide sugar unit biosynthesis; Nucleotide sugars metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-6404; DTDPRHAMSYN-PWY; ECASYN-PWY; OANTIGEN-PWY; PWY-3221;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; dTDP-L-rhamnose biosynthesis;; enterobacterial common antigen biosynthesis;; O-antigen building blocks biosynthesis (E. coli);; ;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; dTDP-Sugar-Biosynthesis;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; ;
pfam_acc PF01073; PF01370; PF16363; PF07993; PF02719; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; Male sterility protein; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; NAD_binding_4; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:1.9e-12 score:46.0 best_domain_score:45.5 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:3.2e-70 score:235.6 best_domain_score:235.3 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:1.4e-94 score:316.4 best_domain_score:316.2 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF07993.12 evalue:2.9e-14 score:52.1 best_domain_score:45.3 name:NAD_binding_4; db:Pfam-A.hmm|PF02719.15 evalue:1.1e-13 score:50.2 best_domain_score:49.6 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:3.2e-14 score:52.0 best_domain_score:51.4 name:RmlD_sub_bind;
sprot_desc dTDP-glucose 4,6-dehydratase;
sprot_id sp|B0RVL0|RMLB_XANCB;
sprot_target db:uniprot_sprot|sp|B0RVL0|RMLB_XANCB 1 344 evalue:3.7e-127 qcov:97.50 identity:63.40;
tigrfam_acc TIGR01181;
tigrfam_desc dTDP-glucose 4,6-dehydratase;
tigrfam_mainrole Cell envelope;
tigrfam_name dTDP_gluc_dehyt;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01181 evalue:5.7e-147 score:488.1 best_domain_score:487.9 name:TIGR01181;
18247 17795 CDS
ID metaerg.pl|09501
allgo_ids GO:0003697; GO:0006310; GO:0006281; GO:0006260; GO:0051096;
allko_ids K03111;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725954.1 1 150 evalue:1.1e-62 qcov:100.00 identity:83.30;
kegg_pathway_id 03030; 03440; 03430;
kegg_pathway_name DNA replication; Homologous recombination; Mismatch repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00436;
pfam_desc Single-strand binding protein family;
pfam_id SSB;
pfam_target db:Pfam-A.hmm|PF00436.25 evalue:2.5e-41 score:139.2 best_domain_score:138.9 name:SSB;
sprot_desc Single-stranded DNA-binding protein;
sprot_id sp|Q83EP4|SSB_COXBU;
sprot_target db:uniprot_sprot|sp|Q83EP4|SSB_COXBU 1 116 evalue:3.7e-44 qcov:77.30 identity:69.00;
tigrfam_acc TIGR00621;
tigrfam_desc single-stranded DNA-binding protein;
tigrfam_mainrole DNA metabolism;
tigrfam_name ssb;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00621 evalue:1.6e-52 score:177.3 best_domain_score:175.8 name:TIGR00621;
18377 19381 CDS
ID metaerg.pl|09502
allec_ids 2.5.1.90;
allgo_ids GO:0008299; GO:0005829; GO:0042802; GO:0046872; GO:0004659; GO:0016094; GO:0006744;
allko_ids K02523;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725955.1 1 333 evalue:1.6e-130 qcov:99.70 identity:76.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:3.4e-74 score:248.3 best_domain_score:248.1 name:polyprenyl_synt;
sprot_desc Octaprenyl diphosphate synthase;
sprot_id sp|P0AD57|ISPB_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AD57|ISPB_ECOLI 15 332 evalue:1.1e-75 qcov:95.20 identity:48.90;
20688 19357 CDS
ID metaerg.pl|09503
allec_ids 6.3.2.53; 6.3.2.9;
allgo_ids GO:0005524; GO:0009058; GO:0016874; GO:0005737; GO:0008764; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01924; K01925; K01928;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169650.1 1 443 evalue:1.2e-149 qcov:100.00 identity:63.30;
kegg_pathway_id 00471; 00300; 00550;
kegg_pathway_name D-Glutamine and D-glutamate metabolism; Lysine biosynthesis; Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-6387; PWY-6385; PWY-5265; PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6386; PWY-6470;
metacyc_pathway_name UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF02875; PF08245;
pfam_desc Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF02875.21 evalue:2.5e-09 score:36.5 best_domain_score:34.4 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:9.9e-22 score:77.1 best_domain_score:73.6 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramoyl-L-alanine--L-glutamate ligase;
sprot_id sp|C4RJF7|MURD2_MICS3;
sprot_target db:uniprot_sprot|sp|C4RJF7|MURD2_MICS3 1 434 evalue:8.0e-63 qcov:98.00 identity:37.60;
tigrfam_acc TIGR01087;
tigrfam_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murD;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01087 evalue:1.9e-89 score:299.9 best_domain_score:299.6 name:TIGR01087;
22024 20678 CDS
ID metaerg.pl|09504
allec_ids 5.1.1.23;
allgo_ids GO:0016853; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K23170;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725957.1 9 448 evalue:4.4e-147 qcov:98.20 identity:59.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
sprot_desc UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase;
sprot_id sp|P0DQD8|MURL_XANOM;
sprot_target db:uniprot_sprot|sp|P0DQD8|MURL_XANOM 17 413 evalue:3.2e-83 qcov:88.60 identity:44.90;
23217 22027 CDS
ID metaerg.pl|09505
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725958.1 1 387 evalue:3.1e-152 qcov:97.70 identity:76.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:2.5e-68 score:229.9 best_domain_score:228.2 name:AI-2E_transport;
sprot_desc Putative permease PerM homolog;
sprot_id sp|P43969|PERM_HAEIN;
sprot_target db:uniprot_sprot|sp|P43969|PERM_HAEIN 1 379 evalue:2.4e-71 qcov:95.70 identity:41.30;
tm_num 7;
23217 22027 transmembrane_helix
ID metaerg.pl|09506
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology o22084-22188i22225-22293o22585-22653i22780-22848o22876-22944i22957-23025o23053-23121i;
24592 23393 CDS
ID metaerg.pl|09507
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725959.1 54 399 evalue:6.2e-108 qcov:86.70 identity:56.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
sp YES;
23393 23476 signal_peptide
ID metaerg.pl|09508
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
24729 25556 CDS
ID metaerg.pl|09509
allec_ids 2.7.1.49; 2.7.1.49 2.7.4.7;
allgo_ids GO:0005524; GO:0008902; GO:0008972; GO:0009228; GO:0009229;
allko_ids K00941;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38231.1 17 266 evalue:1.1e-60 qcov:90.90 identity:54.90;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id THISYNARA-PWY; THISYN-PWY;
metacyc_pathway_name superpathway of thiamine diphosphate biosynthesis III (eukaryotes);; superpathway of thiamine diphosphate biosynthesis I;;
metacyc_pathway_type Super-Pathways; Thiamine-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;;
pfam_acc PF08543;
pfam_desc Phosphomethylpyrimidine kinase;
pfam_id Phos_pyr_kin;
pfam_target db:Pfam-A.hmm|PF08543.12 evalue:6.5e-81 score:270.5 best_domain_score:270.3 name:Phos_pyr_kin;
sprot_desc Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;
sprot_id sp|P56904|THID_RHIME;
sprot_target db:uniprot_sprot|sp|P56904|THID_RHIME 17 248 evalue:2.5e-46 qcov:84.40 identity:51.70;
tigrfam_acc TIGR00097;
tigrfam_desc hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name HMP-P_kinase;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00097 evalue:4.3e-77 score:258.0 best_domain_score:257.8 name:TIGR00097;
26624 25611 CDS
ID metaerg.pl|09510
allec_ids 1.1.1.41;
allgo_ids GO:0016616; GO:0055114; GO:0009507; GO:0005739; GO:0005524; GO:0004449; GO:0000287; GO:0051287; GO:0008270; GO:0006102; GO:0006099;
allko_ids K10978; K00031; K00030;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725960.1 1 334 evalue:2.4e-161 qcov:99.10 identity:87.70;
kegg_pathway_id 00020; 00480; 00720;
kegg_pathway_name Citrate cycle (TCA cycle); Glutathione metabolism; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-5464; PWY-6549; PWY-5690;
metacyc_pathway_name superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; L-glutamine biosynthesis III;; TCA cycle II (plants and fungi);;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; GLUTAMINE-SYN;; TCA-VARIANTS;;
pfam_acc PF00180;
pfam_desc Isocitrate/isopropylmalate dehydrogenase;
pfam_id Iso_dh;
pfam_target db:Pfam-A.hmm|PF00180.20 evalue:1.2e-105 score:352.7 best_domain_score:352.6 name:Iso_dh;
sprot_desc Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial;
sprot_id sp|Q945K7|IDH5_ARATH;
sprot_target db:uniprot_sprot|sp|Q945K7|IDH5_ARATH 6 334 evalue:1.4e-80 qcov:97.60 identity:48.20;
26956 26693 CDS
ID metaerg.pl|09511
allgo_ids GO:0009055; GO:0015035; GO:0045454; GO:0005737; GO:0004362; GO:0034599;
allko_ids K03676;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38229.1 1 86 evalue:8.6e-31 qcov:98.90 identity:73.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00462;
pfam_desc Glutaredoxin;
pfam_id Glutaredoxin;
pfam_target db:Pfam-A.hmm|PF00462.24 evalue:2.2e-20 score:71.9 best_domain_score:71.6 name:Glutaredoxin;
sprot_desc Glutaredoxin;
sprot_id sp|Q9HU55|GLRX_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HU55|GLRX_PSEAE 5 84 evalue:3.1e-19 qcov:92.00 identity:52.50;
tigrfam_acc TIGR02181;
tigrfam_desc glutaredoxin 3;
tigrfam_mainrole Energy metabolism;
tigrfam_name GRX_bact;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02181 evalue:5.2e-33 score:112.3 best_domain_score:112.1 name:TIGR02181;
27374 27018 CDS
ID metaerg.pl|09512
allec_ids 2.8.1.-;
allgo_ids GO:0005737; GO:0016740; GO:0008033;
allko_ids K11179;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725962.1 15 118 evalue:2.9e-37 qcov:88.10 identity:63.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-5963; PWY-5354;
metacyc_pathway_name thio-molybdenum cofactor biosynthesis;; ;
metacyc_pathway_type Cofactor-Biosynthesis;; ;
pfam_acc PF04358;
pfam_desc DsrC like protein;
pfam_id DsrC;
pfam_target db:Pfam-A.hmm|PF04358.13 evalue:2.7e-28 score:97.8 best_domain_score:97.7 name:DsrC;
sprot_desc Sulfurtransferase TusE;
sprot_id sp|Q7N5Z1|TUSE_PHOLL;
sprot_target db:uniprot_sprot|sp|Q7N5Z1|TUSE_PHOLL 11 118 evalue:3.6e-18 qcov:91.50 identity:38.00;
tigrfam_acc TIGR03342;
tigrfam_desc sulfur relay protein, TusE/DsrC/DsvC family;
tigrfam_name dsrC_tusE_dsvC;
tigrfam_target db:TIGRFAMs.hmm|TIGR03342 evalue:1.2e-25 score:89.2 best_domain_score:89.0 name:TIGR03342;
28018 27371 CDS
ID metaerg.pl|09513
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF02635;
pfam_desc DsrE/DsrF-like family;
pfam_id DrsE;
pfam_target db:Pfam-A.hmm|PF02635.15 evalue:2.4e-06 score:27.1 best_domain_score:20.7 name:DrsE;
28076 29539 CDS
ID metaerg.pl|09514
allec_ids 3.4.-.-;
allgo_ids GO:0004222; GO:0006508; GO:0016020; GO:0042597; GO:0008270; GO:0061077;
allko_ids K01423;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169651.1 7 487 evalue:9.6e-172 qcov:98.80 identity:67.60;
kegg_pathway_id 00780; 00310;
kegg_pathway_name Biotin metabolism; Lysine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF01435; PF14559;
pfam_desc Peptidase family M48; Tetratricopeptide repeat;
pfam_id Peptidase_M48; TPR_19;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:4.4e-30 score:104.2 best_domain_score:103.6 name:Peptidase_M48; db:Pfam-A.hmm|PF14559.6 evalue:2.5e-08 score:33.6 best_domain_score:25.5 name:TPR_19;
sp YES;
sprot_desc Beta-barrel assembly-enhancing protease;
sprot_id sp|P66951|BEPA_SALTI;
sprot_target db:uniprot_sprot|sp|P66951|BEPA_SALTI 5 481 evalue:7.4e-54 qcov:97.90 identity:33.40;
28076 28144 signal_peptide
ID metaerg.pl|09515
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
29675 31822 CDS
ID metaerg.pl|09516
allec_ids 2.7.4.1;
allgo_ids GO:0009358; GO:0005524; GO:0046872; GO:0008976; GO:0006799;
allko_ids K00937;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169652.1 15 714 evalue:0.0e+00 qcov:97.90 identity:83.40;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF13091; PF02503; PF13090; PF17941; PF13089;
pfam_desc PLD-like domain; Polyphosphate kinase middle domain; Polyphosphate kinase C-terminal domain 2; Polyphosphate kinase C-terminal domain 1; Polyphosphate kinase N-terminal domain;
pfam_id PLDc_2; PP_kinase; PP_kinase_C; PP_kinase_C_1; PP_kinase_N;
pfam_target db:Pfam-A.hmm|PF13091.6 evalue:3.7e-13 score:48.7 best_domain_score:33.2 name:PLDc_2; db:Pfam-A.hmm|PF02503.17 evalue:4.5e-65 score:218.2 best_domain_score:217.4 name:PP_kinase; db:Pfam-A.hmm|PF13090.6 evalue:4.5e-66 score:220.8 best_domain_score:216.3 name:PP_kinase_C; db:Pfam-A.hmm|PF17941.1 evalue:8.7e-71 score:236.1 best_domain_score:234.2 name:PP_kinase_C_1; db:Pfam-A.hmm|PF13089.6 evalue:4.9e-35 score:119.3 best_domain_score:118.2 name:PP_kinase_N;
sprot_desc Polyphosphate kinase;
sprot_id sp|Q9PAC7|PPK1_XYLFA;
sprot_target db:uniprot_sprot|sp|Q9PAC7|PPK1_XYLFA 33 711 evalue:4.2e-231 qcov:95.00 identity:60.30;
tigrfam_acc TIGR03705;
tigrfam_desc polyphosphate kinase 1;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name poly_P_kin;
tigrfam_sub1role Phosphorus compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR03705 evalue:2.3e-279 score:927.7 best_domain_score:927.5 name:TIGR03705;
31815 33323 CDS
ID metaerg.pl|09517
allec_ids 3.6.1.11;
allgo_ids GO:0005886; GO:0004309; GO:0008976; GO:0071978; GO:0071977; GO:0006995; GO:0016036; GO:0009247; GO:0009405; GO:0006793; GO:0006798; GO:0009372; GO:0044010;
allko_ids K01514; K01524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725965.1 1 501 evalue:1.3e-166 qcov:99.80 identity:60.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF02541;
pfam_desc Ppx/GppA phosphatase family;
pfam_id Ppx-GppA;
pfam_target db:Pfam-A.hmm|PF02541.16 evalue:2e-70 score:236.7 best_domain_score:236.3 name:Ppx-GppA;
sprot_desc Exopolyphosphatase;
sprot_id sp|Q9ZN70|PPX_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9ZN70|PPX_PSEAE 6 495 evalue:3.1e-103 qcov:97.60 identity:41.70;
33320 34237 CDS
ID metaerg.pl|09518
allec_ids 6.3.1.-;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0016880; GO:0004824; GO:0006430; GO:0071915;
allko_ids K04568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169653.1 3 304 evalue:3.6e-100 qcov:99.00 identity:62.40;
kegg_pathway_id 00970; 00300;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-6461; PWY-6471;
metacyc_pathway_name peptidoglycan cross-bridge biosynthesis II (E. faecium);; peptidoglycan biosynthesis IV (Enterococcus faecium);;
metacyc_pathway_type Peptidoglycan-Cross-Bridge-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00152;
pfam_desc tRNA synthetases class II (D, K and N);
pfam_id tRNA-synt_2;
pfam_target db:Pfam-A.hmm|PF00152.20 evalue:6.1e-34 score:116.7 best_domain_score:112.5 name:tRNA-synt_2;
sprot_desc Elongation factor P--(R)-beta-lysine ligase;
sprot_id sp|B4EWY8|EPMA_PROMH;
sprot_target db:uniprot_sprot|sp|B4EWY8|EPMA_PROMH 1 304 evalue:1.4e-69 qcov:99.70 identity:44.50;
tigrfam_acc TIGR00462;
tigrfam_desc EF-P lysine aminoacylase GenX;
tigrfam_mainrole Unknown function;
tigrfam_name genX;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00462 evalue:3e-99 score:331.4 best_domain_score:331.3 name:TIGR00462;
34787 34248 CDS
ID metaerg.pl|09519
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
tm_num 1;
34787 34248 transmembrane_helix
ID metaerg.pl|09520
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology i34266-34334o;
34898 35872 CDS
ID metaerg.pl|09521
allgo_ids GO:0006508; GO:0008233;
allko_ids K01286; K07260;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF02557;
pfam_desc D-alanyl-D-alanine carboxypeptidase;
pfam_id VanY;
pfam_target db:Pfam-A.hmm|PF02557.17 evalue:1.4e-37 score:127.7 best_domain_score:127.0 name:VanY;
37294 35873 CDS
ID metaerg.pl|09522
allec_ids 4.1.99.3;
allgo_ids GO:0003904; GO:0003677; GO:0071949; GO:0000719; GO:0018298;
allko_ids K01669;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727055.1 3 469 evalue:1.3e-200 qcov:98.70 identity:67.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00875; PF03441;
pfam_desc DNA photolyase; FAD binding domain of DNA photolyase;
pfam_id DNA_photolyase; FAD_binding_7;
pfam_target db:Pfam-A.hmm|PF00875.18 evalue:1.7e-52 score:177.0 best_domain_score:176.5 name:DNA_photolyase; db:Pfam-A.hmm|PF03441.14 evalue:7.1e-80 score:266.5 best_domain_score:265.7 name:FAD_binding_7;
sprot_desc Deoxyribodipyrimidine photo-lyase;
sprot_id sp|A9CJC9|PHRA_AGRFC;
sprot_target db:uniprot_sprot|sp|A9CJC9|PHRA_AGRFC 2 469 evalue:6.6e-116 qcov:98.90 identity:45.20;
38841 37366 CDS
ID metaerg.pl|09523
allec_ids 2.4.2.14;
allgo_ids GO:0004044; GO:0000287; GO:0006189; GO:0006541; GO:0009116; GO:0009113;
allko_ids K00762; K00764;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725969.1 1 489 evalue:3.2e-255 qcov:99.60 identity:89.40;
kegg_pathway_id 00251; 00983; 00240; 00230;
kegg_pathway_name Glutamate metabolism; Drug metabolism - other enzymes; Pyrimidine metabolism; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PRPP-PWY; PWY-841; PWY-6277; PWY-6121; DENOVOPURINE2-PWY; PWY-6122;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; 5-aminoimidazole ribonucleotide biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis II;;
metacyc_pathway_type Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;;
pfam_acc PF13522; PF13537;
pfam_desc Glutamine amidotransferase domain; Glutamine amidotransferase domain;
pfam_id GATase_6; GATase_7;
pfam_target db:Pfam-A.hmm|PF13522.6 evalue:9.9e-15 score:54.2 best_domain_score:53.1 name:GATase_6; db:Pfam-A.hmm|PF13537.6 evalue:4e-12 score:45.4 best_domain_score:44.1 name:GATase_7;
sprot_desc Amidophosphoribosyltransferase;
sprot_id sp|Q51342|PUR1_PSEAE;
sprot_target db:uniprot_sprot|sp|Q51342|PUR1_PSEAE 1 485 evalue:2.8e-173 qcov:98.80 identity:63.20;
tigrfam_acc TIGR01134;
tigrfam_desc amidophosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purF;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01134 evalue:1.9e-148 score:494.6 best_domain_score:494.4 name:TIGR01134;
39383 38850 CDS
ID metaerg.pl|09524
allgo_ids GO:0009403; GO:0016020; GO:0016021; GO:0005886;
allko_ids K03558;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169654.1 10 177 evalue:8.1e-60 qcov:94.90 identity:72.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF02674;
pfam_desc Colicin V production protein;
pfam_id Colicin_V;
pfam_target db:Pfam-A.hmm|PF02674.16 evalue:2.1e-38 score:130.8 best_domain_score:130.5 name:Colicin_V;
sprot_desc Colicin V production protein homolog;
sprot_id sp|P45108|CVPA_HAEIN;
sprot_target db:uniprot_sprot|sp|P45108|CVPA_HAEIN 14 174 evalue:3.0e-21 qcov:91.00 identity:42.60;
tm_num 4;
39383 38850 transmembrane_helix
ID metaerg.pl|09525
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology o38892-38951i38964-39023o39066-39134i39171-39239o;
40311 39367 CDS
ID metaerg.pl|09526
allgo_ids GO:0042834;
allko_ids K01448;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725970.1 1 314 evalue:2.4e-62 qcov:100.00 identity:47.50;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF05036;
pfam_desc Sporulation related domain;
pfam_id SPOR;
pfam_target db:Pfam-A.hmm|PF05036.13 evalue:4.3e-38 score:128.8 best_domain_score:67.8 name:SPOR;
tm_num 1;
40311 39367 transmembrane_helix
ID metaerg.pl|09527
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology i39391-39447o;
41583 40318 CDS
ID metaerg.pl|09528
allec_ids 6.3.2.12; 6.3.2.-;
allgo_ids GO:0005524; GO:0009058; GO:0016874; GO:0005737; GO:0008841; GO:0046872; GO:0004326; GO:0046656; GO:0006730; GO:0046654;
allko_ids K11754;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725971.1 1 418 evalue:5.8e-125 qcov:99.30 identity:59.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-6455; PWY-6548; 1CMET2-PWY; ALL-CHORISMATE-PWY; FOLSYN-PWY; PWY-3841;
metacyc_pathway_name vancomycin resistance II;; ; N10-formyl-tetrahydrofolate biosynthesis;; superpathway of chorismate metabolism;; superpathway of tetrahydrofolate biosynthesis and salvage;; folate transformations II;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Vancomycin-Resistnace;; ; Folate-Biosynthesis;; Super-Pathways;; Folate-Biosynthesis; Super-Pathways;; Folate-Transformations;;
pfam_acc PF02875; PF08245;
pfam_desc Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF02875.21 evalue:6.9e-08 score:31.9 best_domain_score:26.4 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:5.2e-10 score:38.9 best_domain_score:38.1 name:Mur_ligase_M;
sprot_desc Dihydrofolate synthase/folylpolyglutamate synthase;
sprot_id sp|P08192|FOLC_ECOLI;
sprot_target db:uniprot_sprot|sp|P08192|FOLC_ECOLI 3 420 evalue:3.1e-72 qcov:99.30 identity:42.50;
tigrfam_acc TIGR01499;
tigrfam_desc bifunctional protein FolC;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name folC;
tigrfam_sub1role Folic acid;
tigrfam_target db:TIGRFAMs.hmm|TIGR01499 evalue:6.6e-95 score:318.0 best_domain_score:317.8 name:TIGR01499;
42511 41603 CDS
ID metaerg.pl|09529
allec_ids 2.1.3.15; 6.4.1.2;
allgo_ids GO:0009317; GO:0003989; GO:0005524; GO:0016743; GO:0008270; GO:0006633; GO:2001295;
allko_ids K01963;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725972.1 1 295 evalue:1.7e-142 qcov:97.70 identity:85.80;
kegg_pathway_id 00253; 00061; 00640; 00620;
kegg_pathway_name Tetracycline biosynthesis; Fatty acid biosynthesis; Propanoate metabolism; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-4381; PWY0-881; PWY-6285; PWY-6113; FASYN-INITIAL-PWY; PWY-5743; PWY-5156; PWY0-1264; PWY-5789;
metacyc_pathway_name fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; 3-hydroxypropanoate cycle;; superpathway of fatty acid biosynthesis II (plant);; biotin-carboxyl carrier protein assembly;; 3-hydroxypropanoate/4-hydroxybutanate cycle;;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;; Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; Autotrophic-CO2-Fixation;;
pfam_acc PF01039; PF17848;
pfam_desc Carboxyl transferase domain; Acetyl-coA carboxylase zinc finger domain;
pfam_id Carboxyl_trans; zf-ACC;
pfam_target db:Pfam-A.hmm|PF01039.22 evalue:4.7e-15 score:54.4 best_domain_score:53.2 name:Carboxyl_trans; db:Pfam-A.hmm|PF17848.1 evalue:5.9e-13 score:47.9 best_domain_score:47.2 name:zf-ACC;
sprot_desc Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta;
sprot_id sp|Q0A9A0|ACCD_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0A9A0|ACCD_ALKEH 1 281 evalue:7.0e-111 qcov:93.00 identity:68.00;
tigrfam_acc TIGR00515;
tigrfam_desc acetyl-CoA carboxylase, carboxyl transferase, beta subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accD;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00515 evalue:3.2e-123 score:409.8 best_domain_score:409.5 name:TIGR00515;
43347 42508 CDS
ID metaerg.pl|09530
allec_ids 4.2.1.20;
allgo_ids GO:0000105; GO:0004834;
allko_ids K01696; K01695; K01817; K06001; K01694;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725973.1 1 278 evalue:1.8e-114 qcov:99.60 identity:75.90;
kegg_pathway_id 00400; 02020;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; TRPSYN-PWY;
metacyc_pathway_name superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; L-tryptophan biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; TRYPTOPHAN-BIOSYNTHESIS;;
pfam_acc PF00977; PF00290;
pfam_desc Histidine biosynthesis protein; Tryptophan synthase alpha chain;
pfam_id His_biosynth; Trp_syntA;
pfam_target db:Pfam-A.hmm|PF00977.21 evalue:2.8e-07 score:29.5 best_domain_score:28.4 name:His_biosynth; db:Pfam-A.hmm|PF00290.20 evalue:9.8e-87 score:289.3 best_domain_score:289.1 name:Trp_syntA;
sprot_desc Tryptophan synthase alpha chain;
sprot_id sp|C1D702|TRPA_LARHH;
sprot_target db:uniprot_sprot|sp|C1D702|TRPA_LARHH 1 265 evalue:2.3e-76 qcov:95.00 identity:57.00;
tigrfam_acc TIGR00262;
tigrfam_desc tryptophan synthase, alpha subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpA;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00262 evalue:2e-72 score:242.3 best_domain_score:242.1 name:TIGR00262;
44567 43344 CDS
ID metaerg.pl|09531
allec_ids 4.2.1.20;
allgo_ids GO:0004834;
allko_ids K01817; K06001; K01694; K01696; K01695;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725974.1 1 407 evalue:3.6e-212 qcov:100.00 identity:89.90;
kegg_pathway_id 02020; 00400;
kegg_pathway_name Two-component system - General; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; TRPSYN-PWY;
metacyc_pathway_name superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; L-tryptophan biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; TRYPTOPHAN-BIOSYNTHESIS;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:6e-44 score:149.9 best_domain_score:149.5 name:PALP;
sprot_desc Tryptophan synthase beta chain;
sprot_id sp|Q604P3|TRPB_METCA;
sprot_target db:uniprot_sprot|sp|Q604P3|TRPB_METCA 11 405 evalue:1.5e-172 qcov:97.10 identity:74.40;
tigrfam_acc TIGR00263;
tigrfam_desc tryptophan synthase, beta subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpB;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00263 evalue:1e-185 score:616.5 best_domain_score:616.3 name:TIGR00263;
45168 44560 CDS
ID metaerg.pl|09532
allec_ids 5.3.1.24;
allgo_ids GO:0004640; GO:0006568; GO:0000162;
allko_ids K01609; K13498; K01817;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725975.1 3 199 evalue:1.3e-66 qcov:97.50 identity:64.50;
kegg_pathway_id 02020; 00400;
kegg_pathway_name Two-component system - General; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id TRPSYN-PWY; COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF00697;
pfam_desc N-(5'phosphoribosyl)anthranilate (PRA) isomerase;
pfam_id PRAI;
pfam_target db:Pfam-A.hmm|PF00697.22 evalue:2.4e-48 score:163.7 best_domain_score:163.5 name:PRAI;
sprot_desc N-(5'-phosphoribosyl)anthranilate isomerase;
sprot_id sp|Q4KEZ9|TRPF_PSEF5;
sprot_target db:uniprot_sprot|sp|Q4KEZ9|TRPF_PSEF5 2 200 evalue:3.8e-52 qcov:98.50 identity:57.40;
45974 45165 CDS
ID metaerg.pl|09533
allec_ids 5.4.99.12;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0106029; GO:0031119;
allko_ids K06173;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725976.1 1 258 evalue:1.8e-111 qcov:95.90 identity:76.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF01416;
pfam_desc tRNA pseudouridine synthase;
pfam_id PseudoU_synth_1;
pfam_target db:Pfam-A.hmm|PF01416.20 evalue:1.2e-42 score:144.0 best_domain_score:106.0 name:PseudoU_synth_1;
sprot_desc tRNA pseudouridine synthase A;
sprot_id sp|A4SNT8|TRUA_AERS4;
sprot_target db:uniprot_sprot|sp|A4SNT8|TRUA_AERS4 1 254 evalue:1.8e-81 qcov:94.40 identity:58.80;
tigrfam_acc TIGR00071;
tigrfam_desc tRNA pseudouridine(38-40) synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name hisT_truA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00071 evalue:3.9e-67 score:225.4 best_domain_score:225.3 name:TIGR00071;
48590 46005 CDS
ID metaerg.pl|09534
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169655.1 1 861 evalue:3.6e-190 qcov:100.00 identity:48.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
sp YES;
tigrfam_acc TIGR03504; TIGR03505;
tigrfam_desc FimV C-terminal domain; FimV N-terminal domain;
tigrfam_name FimV_Cterm; FimV_core;
tigrfam_target db:TIGRFAMs.hmm|TIGR03504 evalue:1.2e-16 score:59.7 best_domain_score:57.8 name:TIGR03504; db:TIGRFAMs.hmm|TIGR03505 evalue:1.1e-24 score:85.2 best_domain_score:84.4 name:TIGR03505;
tm_num 1;
46005 46088 signal_peptide
ID metaerg.pl|09535
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
48590 46005 transmembrane_helix
ID metaerg.pl|09536
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology o47478-47546i;
49746 48727 CDS
ID metaerg.pl|09537
allec_ids 1.2.1.11;
allgo_ids GO:0016620; GO:0051287; GO:0055114; GO:0004073; GO:0050661; GO:0046983; GO:0071266; GO:0019877; GO:0009097; GO:0009089; GO:0009088;
allko_ids K00145; K12659; K00133;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725978.1 1 335 evalue:2.7e-141 qcov:98.80 identity:78.00;
kegg_pathway_id 00220; 00260; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Glycine, serine and threonine metabolism; Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id METSYN-PWY; HOMOSERSYN-PWY; THRESYN-PWY; PWY-724; PWY-6565; PWY-5097; PWY-6562; PWY0-781; PWY-3001; PWY-5345; P4-PWY; P101-PWY; PWY-5347; PWY-6559; PWY-2941; DAPLYSINESYN-PWY; MET-SAM-PWY;
metacyc_pathway_name superpathway of L-homoserine and L-methionine biosynthesis;; L-homoserine biosynthesis;; superpathway of L-threonine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of polyamine biosynthesis III;; L-lysine biosynthesis VI;; norspermidine biosynthesis;; aspartate superpathway;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-methionine biosynthesis (by sulfhydrylation);; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; ectoine biosynthesis;; superpathway of L-methionine biosynthesis (transsulfuration);; spermidine biosynthesis II;; L-lysine biosynthesis II;; L-lysine biosynthesis I;; superpathway of S-adenosyl-L-methionine biosynthesis;;
metacyc_pathway_type Methionine-De-novo-Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis;; Super-Pathways; THREONINE-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Polyamine-Biosynthesis;; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Spermidine-Biosynthesis;; LYSINE-SYN;; LYSINE-SYN;; Super-Pathways;;
pfam_acc PF01118; PF02774;
pfam_desc Semialdehyde dehydrogenase, NAD binding domain; Semialdehyde dehydrogenase, dimerisation domain;
pfam_id Semialdhyde_dh; Semialdhyde_dhC;
pfam_target db:Pfam-A.hmm|PF01118.24 evalue:5.8e-31 score:106.7 best_domain_score:105.5 name:Semialdhyde_dh; db:Pfam-A.hmm|PF02774.18 evalue:1.2e-51 score:174.6 best_domain_score:174.2 name:Semialdhyde_dhC;
sprot_desc Aspartate-semialdehyde dehydrogenase;
sprot_id sp|Q56732|DHAS_SHESP;
sprot_target db:uniprot_sprot|sp|Q56732|DHAS_SHESP 8 335 evalue:1.1e-96 qcov:96.80 identity:55.20;
tigrfam_acc TIGR01296;
tigrfam_desc aspartate-semialdehyde dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name asd_B;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01296 evalue:1e-121 score:405.3 best_domain_score:405.2 name:TIGR01296;
51017 49914 CDS
ID metaerg.pl|09538
allec_ids 4.2.3.5;
allgo_ids GO:0004107; GO:0009073; GO:0009423;
allko_ids K01736;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725979.1 1 362 evalue:5.4e-183 qcov:98.60 identity:86.70;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-6165; ARO-PWY; COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; PWY-6163;
metacyc_pathway_name chorismate biosynthesis II (archaea);; chorismate biosynthesis I;; superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; chorismate biosynthesis from 3-dehydroquinate;;
metacyc_pathway_type Chorismate-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; Chorismate-Biosynthesis;;
pfam_acc PF01264;
pfam_desc Chorismate synthase;
pfam_id Chorismate_synt;
pfam_target db:Pfam-A.hmm|PF01264.21 evalue:1.4e-135 score:450.5 best_domain_score:450.3 name:Chorismate_synt;
sprot_desc Chorismate synthase;
sprot_id sp|Q4UWE0|AROC_XANC8;
sprot_target db:uniprot_sprot|sp|Q4UWE0|AROC_XANC8 2 366 evalue:2.8e-146 qcov:99.50 identity:71.50;
tigrfam_acc TIGR00033;
tigrfam_desc chorismate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name aroC;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00033 evalue:3.5e-133 score:443.1 best_domain_score:442.8 name:TIGR00033;
52735 51140 CDS
ID metaerg.pl|09539
allec_ids 1.5.5.1;
allgo_ids GO:0016491; GO:0055114; GO:0051539; GO:0009055; GO:0004174; GO:0046872; GO:0043783; GO:0048039; GO:0022904;
allko_ids K00176; K00170; K03388; K00124; K00335; K00205; K00441; K00171; K04014; K11260; K00311;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725980.1 1 531 evalue:1.0e-291 qcov:100.00 identity:89.30;
kegg_pathway_id 00640; 00680; 00650; 00790; 00190; 00130; 00630; 00910; 00633; 00620; 00020; 00010; 00720;
kegg_pathway_name Propanoate metabolism; Methane metabolism; Butanoate metabolism; Folate biosynthesis; Oxidative phosphorylation; Ubiquinone biosynthesis; Glyoxylate and dicarboxylate metabolism; Nitrogen metabolism; Trinitrotoluene degradation; Pyruvate metabolism; Citrate cycle (TCA cycle); Glycolysis / Gluconeogenesis; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF01266; PF05187; PF00890; PF03486; PF05834; PF13450; PF07992; PF01946;
pfam_desc FAD dependent oxidoreductase; Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; FAD binding domain; HI0933-like protein; Lycopene cyclase protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Thi4 family;
pfam_id DAO; ETF_QO; FAD_binding_2; HI0933_like; Lycopene_cycl; NAD_binding_8; Pyr_redox_2; Thi4;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:2.2e-09 score:36.6 best_domain_score:26.3 name:DAO; db:Pfam-A.hmm|PF05187.13 evalue:1.1e-41 score:140.5 best_domain_score:139.6 name:ETF_QO; db:Pfam-A.hmm|PF00890.24 evalue:3.3e-11 score:42.1 best_domain_score:27.9 name:FAD_binding_2; db:Pfam-A.hmm|PF03486.14 evalue:4.3e-07 score:28.2 best_domain_score:27.6 name:HI0933_like; db:Pfam-A.hmm|PF05834.12 evalue:3.7e-06 score:25.5 best_domain_score:24.8 name:Lycopene_cycl; db:Pfam-A.hmm|PF13450.6 evalue:3.8e-09 score:35.9 best_domain_score:32.8 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:1.5e-06 score:26.9 best_domain_score:26.3 name:Pyr_redox_2; db:Pfam-A.hmm|PF01946.17 evalue:2.6e-12 score:45.7 best_domain_score:32.9 name:Thi4;
sprot_desc Electron transfer flavoprotein-ubiquinone oxidoreductase;
sprot_id sp|Q9HZP5|ETFD_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HZP5|ETFD_PSEAE 3 531 evalue:1.8e-141 qcov:99.60 identity:47.70;
53540 52968 CDS
ID metaerg.pl|09540
allec_ids 3.1.1.1;
allgo_ids GO:0016788; GO:0005576; GO:0004064; GO:0052689; GO:0004622; GO:0080030;
allko_ids K10804;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169656.1 1 190 evalue:1.4e-62 qcov:100.00 identity:58.90;
kegg_pathway_id 01040;
kegg_pathway_name Biosynthesis of unsaturated fatty acids;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-6303;
metacyc_pathway_name methyl indole-3-acetate interconversion;;
metacyc_pathway_type Auxin-Biosynthesis; Interconversion;;
pfam_acc PF00657; PF13472;
pfam_desc GDSL-like Lipase/Acylhydrolase; GDSL-like Lipase/Acylhydrolase family;
pfam_id Lipase_GDSL; Lipase_GDSL_2;
pfam_target db:Pfam-A.hmm|PF00657.22 evalue:7.5e-11 score:41.6 best_domain_score:41.3 name:Lipase_GDSL; db:Pfam-A.hmm|PF13472.6 evalue:2.3e-18 score:66.5 best_domain_score:66.1 name:Lipase_GDSL_2;
sp YES;
sprot_desc Esterase TesA;
sprot_id sp|Q9HZY8|EST_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HZY8|EST_PSEAE 10 189 evalue:4.5e-47 qcov:94.70 identity:48.10;
52968 53042 signal_peptide
ID metaerg.pl|09541
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
53578 54306 CDS
ID metaerg.pl|09542
allgo_ids GO:0005524; GO:0016887;
allko_ids K11962; K02000; K10539; K02029; K10000; K02023; K10025; K02018; K09812; K10021; K10243; K01990; K11076; K02013; K10235; K05816; K06857; K01998; K10545; K10112; K10111; K10562; K02031; K02049; K02065; K01995; K11072; K02068; K02045; K02028; K10821; K09810; K02062; K10441; K10199; K02071; K06861; K01996; K10017; K02032; K02034; K02017; K11084; K02004; K02052; K02006; K02056; K02010; K05847; K01997; K02003;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169657.1 4 225 evalue:1.2e-95 qcov:91.70 identity:81.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.3e-35 score:122.2 best_domain_score:121.8 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YbbA;
sprot_id sp|P0A9T9|YBBA_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9T9|YBBA_ECO57 8 224 evalue:8.5e-59 qcov:89.70 identity:54.30;
54434 56911 CDS
ID metaerg.pl|09543
allgo_ids GO:0016020; GO:0016021; GO:0005886;
allko_ids K02004;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725981.1 7 824 evalue:0.0e+00 qcov:99.20 identity:70.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF02687;
pfam_desc FtsX-like permease family;
pfam_id FtsX;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:3.8e-08 score:32.9 best_domain_score:28.4 name:FtsX;
sprot_desc Uncharacterized ABC transporter permease YbbP;
sprot_id sp|P77504|YBBP_ECOLI;
sprot_target db:uniprot_sprot|sp|P77504|YBBP_ECOLI 15 812 evalue:3.2e-89 qcov:96.70 identity:29.20;
tm_num 10;
54434 56911 transmembrane_helix
ID metaerg.pl|09544
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology i54503-54571o55220-55288i55373-55441o55499-55567i55616-55684o55697-55765i55844-55912o56525-56593i56687-56755o56798-56857i;
56913 58328 CDS
ID metaerg.pl|09545
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725982.1 2 459 evalue:4.5e-182 qcov:97.20 identity:72.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF01554; PF14667;
pfam_desc MatE; Polysaccharide biosynthesis C-terminal domain;
pfam_id MatE; Polysacc_synt_C;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:3.6e-31 score:107.2 best_domain_score:66.0 name:MatE; db:Pfam-A.hmm|PF14667.6 evalue:3.7e-10 score:39.2 best_domain_score:39.2 name:Polysacc_synt_C;
tm_num 12;
56913 58328 transmembrane_helix
ID metaerg.pl|09546
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology i57009-57077o57120-57188i57222-57290o57348-57416i57435-57503o57516-57575i57663-57731o57759-57827i57885-57953o58011-58079i58113-58181o58191-58259i;
58422 60170 CDS
ID metaerg.pl|09547
genomedb_OC d__Bacteria;p__TA06;c__DG-26;o__SM1-40;f__SM1-40;g__SM1-40;s__SM1-40 sp001303705;
genomedb_acc GCA_001303705.1;
genomedb_target db:genomedb|GCA_001303705.1|KPK70661.1 50 579 evalue:2.5e-89 qcov:91.10 identity:35.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF05960;
pfam_desc Bacterial protein of unknown function (DUF885);
pfam_id DUF885;
pfam_target db:Pfam-A.hmm|PF05960.11 evalue:9.3e-83 score:278.9 best_domain_score:278.7 name:DUF885;
sp YES;
58422 58481 lipoprotein_signal_peptide
ID metaerg.pl|09548
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
60598 60206 CDS
ID metaerg.pl|09549
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725984.1 1 127 evalue:1.1e-32 qcov:97.70 identity:56.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
60689 61267 CDS
ID metaerg.pl|09550
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725985.1 7 192 evalue:1.5e-56 qcov:96.90 identity:57.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF10184; PF12680;
pfam_desc Uncharacterized conserved protein (DUF2358); SnoaL-like domain;
pfam_id DUF2358; SnoaL_2;
pfam_target db:Pfam-A.hmm|PF10184.9 evalue:8.6e-06 score:25.2 best_domain_score:24.8 name:DUF2358; db:Pfam-A.hmm|PF12680.7 evalue:3.6e-12 score:46.1 best_domain_score:45.4 name:SnoaL_2;
sp YES;
60689 60754 lipoprotein_signal_peptide
ID metaerg.pl|09551
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
61270 61818 CDS
ID metaerg.pl|09552
allgo_ids GO:0016872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725986.1 20 176 evalue:4.7e-47 qcov:86.30 identity:61.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF16036;
pfam_desc Chalcone isomerase-like;
pfam_id Chalcone_3;
pfam_target db:Pfam-A.hmm|PF16036.5 evalue:4.8e-10 score:39.0 best_domain_score:38.7 name:Chalcone_3;
sp YES;
61270 61332 signal_peptide
ID metaerg.pl|09553
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
61938 62390 CDS
ID metaerg.pl|09554
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725611.1 8 150 evalue:8.2e-13 qcov:95.30 identity:35.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.3e-22 score:80.1 best_domain_score:79.6 name:Usp;
63311 62403 CDS
ID metaerg.pl|09555
allgo_ids GO:0003824; GO:0050662;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__SZUA-100;s__SZUA-100 sp003232595;
genomedb_acc GCA_003232595.1;
genomedb_target db:genomedb|GCA_003232595.1|QIIJ01000058.1_7 6 291 evalue:6.8e-51 qcov:94.70 identity:40.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF01370; PF13460; PF05368;
pfam_desc NAD dependent epimerase/dehydratase family; NAD(P)H-binding ; NmrA-like family;
pfam_id Epimerase; NAD_binding_10; NmrA;
pfam_target db:Pfam-A.hmm|PF01370.21 evalue:9.2e-08 score:31.1 best_domain_score:28.5 name:Epimerase; db:Pfam-A.hmm|PF13460.6 evalue:4.3e-20 score:71.6 best_domain_score:70.9 name:NAD_binding_10; db:Pfam-A.hmm|PF05368.13 evalue:4.5e-20 score:71.4 best_domain_score:71.0 name:NmrA;
63455 65566 CDS
ID metaerg.pl|09556
allec_ids 3.4.24.70;
allgo_ids GO:0004222; GO:0006508; GO:0005737; GO:0005829; GO:0046872; GO:0008233; GO:0006260; GO:0006465;
allko_ids K01414;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169659.1 9 702 evalue:3.3e-141 qcov:98.70 identity:43.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF01432;
pfam_desc Peptidase family M3;
pfam_id Peptidase_M3;
pfam_target db:Pfam-A.hmm|PF01432.20 evalue:2.5e-85 score:286.7 best_domain_score:285.8 name:Peptidase_M3;
sp YES;
sprot_desc Oligopeptidase A;
sprot_id sp|P27298|OPDA_ECOLI;
sprot_target db:uniprot_sprot|sp|P27298|OPDA_ECOLI 45 702 evalue:5.0e-75 qcov:93.60 identity:29.00;
63455 63487 lipoprotein_signal_peptide
ID metaerg.pl|09557
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
66943 65579 CDS
ID metaerg.pl|09558
allgo_ids GO:0005525; GO:0006614; GO:0048500; GO:0008312; GO:0003924;
allko_ids K03106;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727059.1 1 454 evalue:1.3e-215 qcov:100.00 identity:87.00;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF01656; PF02492; PF00448; PF02881; PF02978; PF06414;
pfam_desc CobQ/CobB/MinD/ParA nucleotide binding domain; CobW/HypB/UreG, nucleotide-binding domain; SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; Zeta toxin;
pfam_id CbiA; cobW; SRP54; SRP54_N; SRP_SPB; Zeta_toxin;
pfam_target db:Pfam-A.hmm|PF01656.23 evalue:1e-06 score:28.1 best_domain_score:24.8 name:CbiA; db:Pfam-A.hmm|PF02492.19 evalue:7.3e-06 score:24.9 best_domain_score:23.5 name:cobW; db:Pfam-A.hmm|PF00448.22 evalue:2.3e-72 score:242.0 best_domain_score:241.2 name:SRP54; db:Pfam-A.hmm|PF02881.19 evalue:5.6e-20 score:70.6 best_domain_score:70.6 name:SRP54_N; db:Pfam-A.hmm|PF02978.19 evalue:1.4e-33 score:114.6 best_domain_score:110.2 name:SRP_SPB; db:Pfam-A.hmm|PF06414.12 evalue:1.3e-05 score:23.8 best_domain_score:22.4 name:Zeta_toxin;
sprot_desc Signal recognition particle protein;
sprot_id sp|P0AGD9|SRP54_ECO57;
sprot_target db:uniprot_sprot|sp|P0AGD9|SRP54_ECO57 1 453 evalue:9.4e-152 qcov:99.80 identity:62.80;
tigrfam_acc TIGR00959;
tigrfam_desc signal recognition particle protein;
tigrfam_mainrole Protein fate;
tigrfam_name ffh;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00959 evalue:6.9e-174 score:577.8 best_domain_score:577.4 name:TIGR00959;
67032 67880 CDS
ID metaerg.pl|09559
allgo_ids GO:0017004; GO:0020037;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725991.1 1 276 evalue:1.6e-81 qcov:97.90 identity:61.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF01578;
pfam_desc Cytochrome C assembly protein;
pfam_id Cytochrom_C_asm;
pfam_target db:Pfam-A.hmm|PF01578.20 evalue:2.7e-28 score:98.4 best_domain_score:98.4 name:Cytochrom_C_asm;
sp YES;
tm_num 8;
67032 67091 lipoprotein_signal_peptide
ID metaerg.pl|09560
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
67032 67880 transmembrane_helix
ID metaerg.pl|09561
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology o67044-67112i67137-67193o67221-67289i67308-67367o67410-67478i67563-67631o67674-67727i67746-67814o;
67873 69141 CDS
ID metaerg.pl|09562
allgo_ids GO:0016021; GO:0005886; GO:0050660;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725992.1 4 417 evalue:6.6e-185 qcov:98.10 identity:80.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00571; PF03471; PF01595;
pfam_desc CBS domain; Transporter associated domain; Cyclin M transmembrane N-terminal domain;
pfam_id CBS; CorC_HlyC; DUF21;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:1.5e-10 score:40.6 best_domain_score:22.8 name:CBS; db:Pfam-A.hmm|PF03471.17 evalue:1.4e-17 score:62.7 best_domain_score:60.9 name:CorC_HlyC; db:Pfam-A.hmm|PF01595.20 evalue:1.5e-46 score:157.5 best_domain_score:157.0 name:DUF21;
sprot_desc hypothetical protein;
sprot_id sp|P37908|YFJD_ECOLI;
sprot_target db:uniprot_sprot|sp|P37908|YFJD_ECOLI 23 419 evalue:1.1e-98 qcov:94.10 identity:46.40;
tm_num 4;
67873 69141 transmembrane_helix
ID metaerg.pl|09563
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology o67885-67953i68059-68127o68155-68208i68245-68313o;
71272 69242 CDS
ID metaerg.pl|09564
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169660.1 98 674 evalue:4.8e-145 qcov:85.40 identity:48.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
sp YES;
69242 69334 signal_peptide
ID metaerg.pl|09565
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
71299 72033 CDS
ID metaerg.pl|09566
allec_ids 2.7.13.3;
allgo_ids GO:0000160; GO:0016021; GO:0005886; GO:0005524; GO:0000155;
allko_ids K07709; K07644; K06379; K10681; K07676; K07647; K07675; K07717; K12767; K02486; K11383; K07769; K04757; K10125; K11357; K02489; K07716; K07710; K02668; K03388; K08479; K10916; K11527; K10715; K07678; K02482; K14489; K02480; K07653; K07638; K07636; K02484; K11356; K11640; K11711; K07642; K11231; K07645; K07708; K07677; K10909; K07704; K01937; K08282; K07641; K07646; K08475; K07639; K01120; K07673; K07652; K07654; K07682; K00936; K03407; K07679; K02478; K07648; K07651; K07778; K11354; K07768; K07711; K00873;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL39219.1 3 243 evalue:1.2e-50 qcov:98.80 identity:48.40;
kegg_pathway_id 05111; 00230; 00240; 00010; 00710; 00790; 02020; 04011; 00620; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Folate biosynthesis; Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:3.5e-26 score:90.8 best_domain_score:90.1 name:Response_reg;
sprot_desc Signal transduction histidine-protein kinase BarA;
sprot_id sp|P0AEC7|BARA_ECO57;
sprot_target db:uniprot_sprot|sp|P0AEC7|BARA_ECO57 1 219 evalue:5.1e-19 qcov:89.80 identity:29.60;
72768 72049 CDS
ID metaerg.pl|09567
allec_ids 2.6.99.2;
allgo_ids GO:0005737; GO:0008615; GO:0033856;
allko_ids K03474;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725995.1 1 237 evalue:2.2e-89 qcov:99.20 identity:74.30;
kegg_pathway_id 00750;
kegg_pathway_name Vitamin B6 metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PYRIDOXSYN-PWY; PWY0-845;
metacyc_pathway_name pyridoxal 5'-phosphate biosynthesis I;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;;
metacyc_pathway_type Vitamin-B6-Biosynthesis;; Super-Pathways; Vitamin-B6-Biosynthesis;;
pfam_acc PF03740;
pfam_desc Pyridoxal phosphate biosynthesis protein PdxJ;
pfam_id PdxJ;
pfam_target db:Pfam-A.hmm|PF03740.13 evalue:3.6e-99 score:329.8 best_domain_score:329.7 name:PdxJ;
sprot_desc Pyridoxine 5'-phosphate synthase;
sprot_id sp|Q2Y865|PDXJ_NITMU;
sprot_target db:uniprot_sprot|sp|Q2Y865|PDXJ_NITMU 4 237 evalue:7.8e-81 qcov:97.90 identity:67.20;
tigrfam_acc TIGR00559;
tigrfam_desc pyridoxine 5'-phosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name pdxJ;
tigrfam_sub1role Pyridoxine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00559 evalue:1.7e-93 score:311.7 best_domain_score:311.6 name:TIGR00559;
73517 72765 CDS
ID metaerg.pl|09568
allgo_ids GO:0006281; GO:0006310;
allko_ids K03584;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725996.1 3 230 evalue:3.7e-66 qcov:91.20 identity:58.10;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF02565; PF11967;
pfam_desc Recombination protein O C terminal; Recombination protein O N terminal;
pfam_id RecO_C; RecO_N;
pfam_target db:Pfam-A.hmm|PF02565.15 evalue:2.4e-16 score:59.2 best_domain_score:58.2 name:RecO_C; db:Pfam-A.hmm|PF11967.8 evalue:3.3e-19 score:67.9 best_domain_score:66.9 name:RecO_N;
sprot_desc DNA repair protein RecO;
sprot_id sp|Q0A8Y9|RECO_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0A8Y9|RECO_ALKEH 7 231 evalue:1.2e-44 qcov:90.00 identity:47.60;
tigrfam_acc TIGR00613;
tigrfam_desc DNA repair protein RecO;
tigrfam_mainrole DNA metabolism;
tigrfam_name reco;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00613 evalue:3.3e-21 score:75.0 best_domain_score:74.3 name:TIGR00613;
74488 73598 CDS
ID metaerg.pl|09569
allgo_ids GO:0005525; GO:0005737; GO:0005886; GO:0003924; GO:0070181; GO:0042274;
allko_ids K03595;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169662.1 3 296 evalue:5.6e-114 qcov:99.30 identity:72.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF04548; PF02492; PF00350; PF02421; PF00009; PF07650; PF01926; PF10662; PF00071; PF03193;
pfam_desc AIG1 family; CobW/HypB/UreG, nucleotide-binding domain; Dynamin family; Ferrous iron transport protein B; Elongation factor Tu GTP binding domain; KH domain; 50S ribosome-binding GTPase; Ethanolamine utilisation - propanediol utilisation; Ras family; RsgA GTPase;
pfam_id AIG1; cobW; Dynamin_N; FeoB_N; GTP_EFTU; KH_2; MMR_HSR1; PduV-EutP; Ras; RsgA_GTPase;
pfam_target db:Pfam-A.hmm|PF04548.16 evalue:1.9e-09 score:36.4 best_domain_score:35.6 name:AIG1; db:Pfam-A.hmm|PF02492.19 evalue:1.1e-05 score:24.3 best_domain_score:22.1 name:cobW; db:Pfam-A.hmm|PF00350.23 evalue:9.3e-10 score:38.0 best_domain_score:24.4 name:Dynamin_N; db:Pfam-A.hmm|PF02421.18 evalue:3e-18 score:65.0 best_domain_score:64.5 name:FeoB_N; db:Pfam-A.hmm|PF00009.27 evalue:3.2e-09 score:35.8 best_domain_score:30.6 name:GTP_EFTU; db:Pfam-A.hmm|PF07650.17 evalue:6.1e-16 score:57.3 best_domain_score:56.5 name:KH_2; db:Pfam-A.hmm|PF01926.23 evalue:5.4e-26 score:90.1 best_domain_score:89.2 name:MMR_HSR1; db:Pfam-A.hmm|PF10662.9 evalue:1.1e-05 score:24.4 best_domain_score:22.9 name:PduV-EutP; db:Pfam-A.hmm|PF00071.22 evalue:5.8e-05 score:22.0 best_domain_score:20.6 name:Ras; db:Pfam-A.hmm|PF03193.16 evalue:1.2e-09 score:37.5 best_domain_score:19.5 name:RsgA_GTPase;
sprot_desc GTPase Era;
sprot_id sp|B2FPX8|ERA_STRMK;
sprot_target db:uniprot_sprot|sp|B2FPX8|ERA_STRMK 5 294 evalue:2.3e-66 qcov:98.00 identity:47.20;
tigrfam_acc TIGR00231; TIGR00436;
tigrfam_desc small GTP-binding protein domain; GTP-binding protein Era;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; era;
tigrfam_sub1role General; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:2.9e-26 score:91.3 best_domain_score:90.9 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00436 evalue:8.4e-78 score:260.6 best_domain_score:260.4 name:TIGR00436;
75219 74506 CDS
ID metaerg.pl|09570
allec_ids 3.1.26.3;
allgo_ids GO:0004525; GO:0006396; GO:0005737; GO:0046872; GO:0019843; GO:0006397; GO:0016075; GO:0006364; GO:0008033;
allko_ids K03685;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725998.1 4 224 evalue:4.3e-93 qcov:93.20 identity:79.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00035; PF00636; PF14622;
pfam_desc Double-stranded RNA binding motif; Ribonuclease III domain; Ribonuclease-III-like;
pfam_id dsrm; Ribonuclease_3; Ribonucleas_3_3;
pfam_target db:Pfam-A.hmm|PF00035.26 evalue:1.3e-11 score:44.3 best_domain_score:43.7 name:dsrm; db:Pfam-A.hmm|PF00636.26 evalue:8.1e-21 score:73.9 best_domain_score:72.8 name:Ribonuclease_3; db:Pfam-A.hmm|PF14622.6 evalue:5.4e-35 score:119.6 best_domain_score:118.6 name:Ribonucleas_3_3;
sprot_desc Ribonuclease 3;
sprot_id sp|Q7WD32|RNC_BORBR;
sprot_target db:uniprot_sprot|sp|Q7WD32|RNC_BORBR 12 217 evalue:1.1e-53 qcov:86.90 identity:53.90;
tigrfam_acc TIGR02191;
tigrfam_desc ribonuclease III;
tigrfam_mainrole Transcription;
tigrfam_name RNaseIII;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR02191 evalue:2.5e-69 score:232.3 best_domain_score:232.1 name:TIGR02191;
75741 75373 CDS
ID metaerg.pl|09571
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725999.1 7 122 evalue:5.8e-41 qcov:95.10 identity:74.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF16137;
pfam_desc Domain of unknown function (DUF4845);
pfam_id DUF4845;
pfam_target db:Pfam-A.hmm|PF16137.5 evalue:3.1e-20 score:72.0 best_domain_score:71.7 name:DUF4845;
tm_num 1;
75741 75373 transmembrane_helix
ID metaerg.pl|09572
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology o75415-75483i;
76601 75819 CDS
ID metaerg.pl|09573
allec_ids 3.4.21.89;
allgo_ids GO:0016021; GO:0005886; GO:0008236;
allko_ids K03100;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726000.1 1 260 evalue:1.1e-113 qcov:100.00 identity:73.80;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00717; PF10502;
pfam_desc Peptidase S24-like; Signal peptidase, peptidase S26;
pfam_id Peptidase_S24; Peptidase_S26;
pfam_target db:Pfam-A.hmm|PF00717.23 evalue:1.6e-22 score:78.5 best_domain_score:77.7 name:Peptidase_S24; db:Pfam-A.hmm|PF10502.9 evalue:1.3e-10 score:40.4 best_domain_score:24.5 name:Peptidase_S26;
sprot_desc Signal peptidase I;
sprot_id sp|P0A1W3|LEP_SALTI;
sprot_target db:uniprot_sprot|sp|P0A1W3|LEP_SALTI 3 248 evalue:1.8e-51 qcov:94.60 identity:39.30;
tigrfam_acc TIGR02227;
tigrfam_desc signal peptidase I;
tigrfam_mainrole Protein fate;
tigrfam_name sigpep_I_bact;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02227 evalue:1.2e-49 score:167.5 best_domain_score:166.9 name:TIGR02227;
tm_num 2;
76601 75819 transmembrane_helix
ID metaerg.pl|09574
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology o75828-75878i75939-76007o;
78411 76606 CDS
ID metaerg.pl|09575
allec_ids 3.6.5.n1; 3.6.5.-;
allgo_ids GO:0003924; GO:0005525; GO:0005886; GO:0043022; GO:0003746; GO:0045727;
allko_ids K00956; K00860; K00955; K03018; K03596;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726001.1 1 601 evalue:0.0e+00 qcov:100.00 identity:91.30;
kegg_pathway_id 00230; 03020; 00450; 00920;
kegg_pathway_name Purine metabolism; RNA polymerase; Selenoamino acid metabolism; Sulfur metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00679; PF00009; PF03144; PF06421; PF00071;
pfam_desc Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; GTP-binding protein LepA C-terminus; Ras family;
pfam_id EFG_C; GTP_EFTU; GTP_EFTU_D2; LepA_C; Ras;
pfam_target db:Pfam-A.hmm|PF00679.24 evalue:1.3e-18 score:66.0 best_domain_score:64.7 name:EFG_C; db:Pfam-A.hmm|PF00009.27 evalue:1.8e-52 score:176.9 best_domain_score:176.3 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:2.5e-08 score:33.4 best_domain_score:32.5 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF06421.12 evalue:2e-49 score:165.4 best_domain_score:164.5 name:LepA_C; db:Pfam-A.hmm|PF00071.22 evalue:6.7e-05 score:21.8 best_domain_score:20.5 name:Ras;
sprot_desc Elongation factor 4;
sprot_id sp|B2FQC4|LEPA_STRMK;
sprot_target db:uniprot_sprot|sp|B2FQC4|LEPA_STRMK 5 600 evalue:3.9e-262 qcov:99.20 identity:73.30;
tigrfam_acc TIGR00231; TIGR01393;
tigrfam_desc small GTP-binding protein domain; elongation factor 4;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name small_GTP; lepA;
tigrfam_sub1role General; General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:3.4e-19 score:68.4 best_domain_score:66.4 name:TIGR00231; db:TIGRFAMs.hmm|TIGR01393 evalue:1.2e-291 score:967.5 best_domain_score:967.3 name:TIGR01393;
79917 78505 CDS
ID metaerg.pl|09576
allec_ids 3.4.21.107; 3.4.21.-;
allgo_ids GO:0005515; GO:0042597; GO:0004252;
allko_ids K04771;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726002.1 2 470 evalue:1.9e-177 qcov:99.80 identity:69.40;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF00595; PF13180; PF17820; PF10459; PF00089; PF13365;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Peptidase S46; Trypsin; Trypsin-like peptidase domain;
pfam_id PDZ; PDZ_2; PDZ_6; Peptidase_S46; Trypsin; Trypsin_2;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:6.7e-13 score:48.0 best_domain_score:30.4 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:1.6e-21 score:75.6 best_domain_score:49.2 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:6.1e-17 score:60.5 best_domain_score:32.3 name:PDZ_6; db:Pfam-A.hmm|PF10459.9 evalue:1.3e-05 score:23.3 best_domain_score:11.6 name:Peptidase_S46; db:Pfam-A.hmm|PF00089.26 evalue:2.1e-15 score:56.4 best_domain_score:55.4 name:Trypsin; db:Pfam-A.hmm|PF13365.6 evalue:2.1e-34 score:118.8 best_domain_score:118.1 name:Trypsin_2;
sp YES;
sprot_desc Probable periplasmic serine endoprotease DegP-like;
sprot_id sp|A5W8F5|DEGPL_PSEP1;
sprot_target db:uniprot_sprot|sp|A5W8F5|DEGPL_PSEP1 3 464 evalue:9.0e-97 qcov:98.30 identity:44.30;
tigrfam_acc TIGR02037;
tigrfam_desc peptidase Do;
tigrfam_mainrole Protein fate;
tigrfam_name degP_htrA_DO;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02037 evalue:4.1e-140 score:466.7 best_domain_score:466.4 name:TIGR02037;
78505 78570 signal_peptide
ID metaerg.pl|09577
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
80443 79964 CDS
ID metaerg.pl|09578
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726003.1 5 149 evalue:1.2e-25 qcov:91.20 identity:45.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF04246;
pfam_desc Positive regulator of sigma(E), RseC/MucC;
pfam_id RseC_MucC;
pfam_target db:Pfam-A.hmm|PF04246.12 evalue:2.4e-19 score:68.8 best_domain_score:68.5 name:RseC_MucC;
tm_num 2;
80443 79964 transmembrane_helix
ID metaerg.pl|09579
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
topology i80210-80278o80288-80356i;
81485 80478 CDS
ID metaerg.pl|09580
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726004.1 1 335 evalue:9.7e-107 qcov:100.00 identity:60.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF03888; PF17188;
pfam_desc MucB/RseB N-terminal domain; MucB/RseB C-terminal domain;
pfam_id MucB_RseB; MucB_RseB_C;
pfam_target db:Pfam-A.hmm|PF03888.14 evalue:8.6e-57 score:190.8 best_domain_score:190.1 name:MucB_RseB; db:Pfam-A.hmm|PF17188.4 evalue:8e-21 score:73.3 best_domain_score:72.7 name:MucB_RseB_C;
sp YES;
80478 80552 signal_peptide
ID metaerg.pl|09581
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
82087 81488 CDS
ID metaerg.pl|09582
allgo_ids GO:0016989;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726005.1 7 199 evalue:1.5e-59 qcov:97.00 identity:63.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF03872;
pfam_desc Anti sigma-E protein RseA, N-terminal domain;
pfam_id RseA_N;
pfam_target db:Pfam-A.hmm|PF03872.13 evalue:1.3e-15 score:56.9 best_domain_score:56.0 name:RseA_N;
82683 82102 CDS
ID metaerg.pl|09583
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0000345; GO:0032993; GO:0001216; GO:0016987; GO:0000976; GO:0042121; GO:0071236; GO:0036460; GO:1902201; GO:0009405; GO:1900189; GO:1900036; GO:1902884; GO:1900233; GO:0045893; GO:0032885;
allko_ids K03088;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726006.1 1 193 evalue:1.3e-98 qcov:100.00 identity:96.90;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
pfam_acc PF07638; PF04542; PF04545; PF08281;
pfam_desc ECF sigma factor; Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_ECF; Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF07638.11 evalue:6.3e-12 score:45.0 best_domain_score:44.6 name:Sigma70_ECF; db:Pfam-A.hmm|PF04542.14 evalue:2.3e-19 score:68.2 best_domain_score:67.4 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:2e-09 score:36.1 best_domain_score:35.2 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:3.5e-18 score:64.3 best_domain_score:62.9 name:Sigma70_r4_2;
sprot_desc RNA polymerase sigma-H factor;
sprot_id sp|Q06198|RPSH_PSEAE;
sprot_target db:uniprot_sprot|sp|Q06198|RPSH_PSEAE 4 190 evalue:9.1e-72 qcov:96.90 identity:73.80;
tigrfam_acc TIGR02937; TIGR02939;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE;
tigrfam_name sigma70-ECF; RpoE_Sigma70;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:1.2e-33 score:115.2 best_domain_score:115.0 name:TIGR02937; db:TIGRFAMs.hmm|TIGR02939 evalue:1.1e-98 score:328.1 best_domain_score:327.9 name:TIGR02939;
82936 84465 CDS
ID metaerg.pl|09584
allec_ids 1.2.1.31;
allgo_ids GO:0016491; GO:0055114; GO:0005829; GO:0005739; GO:0005634; GO:0008802; GO:0043878; GO:0004043; GO:0019285;
allko_ids K00128; K00294; K14085; K00155; K13821;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726007.1 1 509 evalue:4.0e-261 qcov:100.00 identity:85.70;
kegg_pathway_id 00281; 00280; 00010; 00624; 00310; 00626; 00251; 00631; 00340; 00410; 00071; 00641; 00380; 00120; 00561; 00903; 00220; 00620; 00330; 00640; 00650;
kegg_pathway_name Geraniol degradation; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; Lysine degradation; Naphthalene and anthracene degradation; Glutamate metabolism; 1,2-Dichloroethane degradation; Histidine metabolism; beta-Alanine metabolism; Fatty acid metabolism; 3-Chloroacrylic acid degradation; Tryptophan metabolism; Bile acid biosynthesis; Glycerolipid metabolism; Limonene and pinene degradation; Urea cycle and metabolism of amino groups; Pyruvate metabolism; Arginine and proline metabolism; Propanoate metabolism; Butanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0796588; 55.7786; 0.0633693; 55.6043; 0.0312285;
metacyc_pathway_id PWY-5298; PWY-5327; PWY-5314; PWY-5324;
metacyc_pathway_name L-lysine degradation VI;; superpathway of L-lysine degradation;; L-lysine degradation VIII;; L-lysine degradation IX;;
metacyc_pathway_type LYSINE-DEG;; LYSINE-DEG; Super-Pathways;; LYSINE-DEG;; LYSINE-DEG;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:1.5e-131 score:438.4 best_domain_score:438.2 name:Aldedh;
sprot_desc Alpha-aminoadipic semialdehyde dehydrogenase;
sprot_id sp|Q2KJC9|AL7A1_BOVIN;
sprot_target db:uniprot_sprot|sp|Q2KJC9|AL7A1_BOVIN 8 508 evalue:6.6e-146 qcov:98.40 identity:54.80;
>Feature NODE_68_length_84545_cov_6.93688
1 441 CDS
ID metaerg.pl|09585
genomedb_OC d__Bacteria;p__Desulfobacterota_A;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfonatronovibrionaceae;g__Desulfonatronospira;s__Desulfonatronospira thiodismutans;
genomedb_acc GCF_000174435.1;
genomedb_target db:genomedb|GCF_000174435.1|WP_008869365.1 37 145 evalue:4.7e-13 qcov:74.70 identity:34.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
452 2386 CDS
ID metaerg.pl|09586
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus;s__Thermus igniterrae;
genomedb_acc GCF_000376265.1;
genomedb_target db:genomedb|GCF_000376265.1|WP_083922115.1 8 644 evalue:9.8e-140 qcov:98.90 identity:45.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
sp YES;
tm_num 1;
452 580 signal_peptide
ID metaerg.pl|09587
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
452 2386 transmembrane_helix
ID metaerg.pl|09588
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology i470-538o;
3456 2494 CDS
ID metaerg.pl|09589
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000010.1_27 12 320 evalue:3.0e-73 qcov:96.60 identity:45.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
tm_num 8;
3456 2494 transmembrane_helix
ID metaerg.pl|09590
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology i2530-2598o2668-2736i2773-2841o2851-2919i2977-3045o3139-3207i3241-3309o3337-3396i;
3625 3552 tRNA
ID metaerg.pl|09591
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
name tRNA_Lys_ttt;
4338 3673 CDS
ID metaerg.pl|09592
allec_ids 3.1.26.4;
allgo_ids GO:0005737; GO:0030145; GO:0003723; GO:0004523; GO:0006401;
allko_ids K03470;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000016.1_31 7 216 evalue:8.5e-67 qcov:95.00 identity:63.80;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF01351;
pfam_desc Ribonuclease HII;
pfam_id RNase_HII;
pfam_target db:Pfam-A.hmm|PF01351.18 evalue:2.6e-34 score:118.0 best_domain_score:117.8 name:RNase_HII;
sprot_desc Ribonuclease HII;
sprot_id sp|Q8DL36|RNH2_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DL36|RNH2_THEEB 14 205 evalue:6.4e-45 qcov:86.90 identity:53.10;
4726 4376 CDS
ID metaerg.pl|09593
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000016.1_30 1 114 evalue:3.1e-44 qcov:98.30 identity:82.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF01245;
pfam_desc Ribosomal protein L19;
pfam_id Ribosomal_L19;
pfam_target db:Pfam-A.hmm|PF01245.20 evalue:7.9e-52 score:173.1 best_domain_score:173.0 name:Ribosomal_L19;
sprot_desc 50S ribosomal protein L19;
sprot_id sp|P30529|RL19_GEOSE;
sprot_target db:uniprot_sprot|sp|P30529|RL19_GEOSE 1 113 evalue:2.0e-37 qcov:97.40 identity:68.10;
tigrfam_acc TIGR01024;
tigrfam_desc ribosomal protein bL19;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplS_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01024 evalue:5.8e-50 score:167.3 best_domain_score:167.2 name:TIGR01024;
5624 4926 CDS
ID metaerg.pl|09594
allec_ids 2.1.1.228;
allgo_ids GO:0005829; GO:0052906; GO:0009019; GO:0002939;
allko_ids K00554;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000047.1_10 1 216 evalue:3.1e-96 qcov:93.10 identity:77.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF01746;
pfam_desc tRNA (Guanine-1)-methyltransferase;
pfam_id tRNA_m1G_MT;
pfam_target db:Pfam-A.hmm|PF01746.21 evalue:8.6e-51 score:171.6 best_domain_score:171.5 name:tRNA_m1G_MT;
sprot_desc tRNA (guanine-N(1)-)-methyltransferase;
sprot_id sp|Q7MBC8|TRMD_GLOVI;
sprot_target db:uniprot_sprot|sp|Q7MBC8|TRMD_GLOVI 1 220 evalue:8.2e-59 qcov:94.80 identity:54.00;
tigrfam_acc TIGR00088;
tigrfam_desc tRNA (guanine(37)-N(1))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name trmD;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00088 evalue:2.2e-73 score:245.5 best_domain_score:245.2 name:TIGR00088;
6192 5677 CDS
ID metaerg.pl|09595
allgo_ids GO:0006364; GO:0005840; GO:0043022; GO:0042274;
allko_ids K02860;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000006.1_2 1 171 evalue:4.6e-36 qcov:100.00 identity:46.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF01782;
pfam_desc RimM N-terminal domain;
pfam_id RimM;
pfam_target db:Pfam-A.hmm|PF01782.18 evalue:1.6e-14 score:53.1 best_domain_score:52.6 name:RimM;
sprot_desc Ribosome maturation factor RimM;
sprot_id sp|A4TE78|RIMM_MYCGI;
sprot_target db:uniprot_sprot|sp|A4TE78|RIMM_MYCGI 1 171 evalue:5.1e-26 qcov:100.00 identity:41.30;
tigrfam_acc TIGR02273;
tigrfam_desc 16S rRNA processing protein RimM;
tigrfam_mainrole Transcription;
tigrfam_name 16S_RimM;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR02273 evalue:1.5e-30 score:104.9 best_domain_score:104.7 name:TIGR02273;
6764 6216 CDS
ID metaerg.pl|09596
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000016.1_23 1 145 evalue:3.6e-39 qcov:79.70 identity:65.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00886;
pfam_desc Ribosomal protein S16;
pfam_id Ribosomal_S16;
pfam_target db:Pfam-A.hmm|PF00886.19 evalue:9e-23 score:79.4 best_domain_score:78.3 name:Ribosomal_S16;
tigrfam_acc TIGR00002;
tigrfam_desc ribosomal protein bS16;
tigrfam_mainrole Protein synthesis;
tigrfam_name S16;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00002 evalue:6.5e-30 score:102.1 best_domain_score:101.2 name:TIGR00002;
8247 6937 CDS
ID metaerg.pl|09597
allgo_ids GO:0005525; GO:0006614; GO:0048500; GO:0008312; GO:0003924;
allko_ids K03106;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000338.1_12 1 434 evalue:4.6e-173 qcov:99.50 identity:73.30;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF13401; PF01656; PF00448; PF02881; PF02978;
pfam_desc AAA domain; CobQ/CobB/MinD/ParA nucleotide binding domain; SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain;
pfam_id AAA_22; CbiA; SRP54; SRP54_N; SRP_SPB;
pfam_target db:Pfam-A.hmm|PF13401.6 evalue:4.6e-08 score:32.7 best_domain_score:31.4 name:AAA_22; db:Pfam-A.hmm|PF01656.23 evalue:2.7e-06 score:26.7 best_domain_score:23.5 name:CbiA; db:Pfam-A.hmm|PF00448.22 evalue:9.7e-74 score:246.5 best_domain_score:245.8 name:SRP54; db:Pfam-A.hmm|PF02881.19 evalue:2.9e-20 score:71.5 best_domain_score:69.5 name:SRP54_N; db:Pfam-A.hmm|PF02978.19 evalue:1.8e-33 score:114.4 best_domain_score:113.6 name:SRP_SPB;
sprot_desc Signal recognition particle protein;
sprot_id sp|P37105|SRP54_BACSU;
sprot_target db:uniprot_sprot|sp|P37105|SRP54_BACSU 2 414 evalue:9.5e-109 qcov:94.70 identity:49.00;
tigrfam_acc TIGR00959;
tigrfam_desc signal recognition particle protein;
tigrfam_mainrole Protein fate;
tigrfam_name ffh;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00959 evalue:9.2e-171 score:567.5 best_domain_score:567.3 name:TIGR00959;
9595 8330 CDS
ID metaerg.pl|09598
allec_ids 6.3.4.4;
allgo_ids GO:0004019; GO:0005525; GO:0006164; GO:0005737; GO:0000287; GO:0044208;
allko_ids K01939;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000331.1_6 2 420 evalue:7.5e-173 qcov:99.50 identity:72.40;
kegg_pathway_id 00230; 00252;
kegg_pathway_name Purine metabolism; Alanine and aspartate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
metacyc_pathway_id PWY-6126; PRPP-PWY; PWY-841; DENOVOPURINE2-PWY; P121-PWY;
metacyc_pathway_name superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis II;; adenine and adenosine salvage I;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Adenine-Adenosine-Salvage;;
pfam_acc PF00709;
pfam_desc Adenylosuccinate synthetase;
pfam_id Adenylsucc_synt;
pfam_target db:Pfam-A.hmm|PF00709.21 evalue:1e-160 score:534.5 best_domain_score:534.3 name:Adenylsucc_synt;
sprot_desc Adenylosuccinate synthetase;
sprot_id sp|A4J9P7|PURA_DESRM;
sprot_target db:uniprot_sprot|sp|A4J9P7|PURA_DESRM 1 418 evalue:4.1e-125 qcov:99.30 identity:53.20;
tigrfam_acc TIGR00184;
tigrfam_desc adenylosuccinate synthase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purA;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00184 evalue:2.6e-154 score:513.3 best_domain_score:513.1 name:TIGR00184;
10777 9869 CDS
ID metaerg.pl|09599
allec_ids 4.1.3.16;
allgo_ids GO:0016829; GO:0005739; GO:0008700; GO:0042803; GO:0019470; GO:0009436; GO:0046487; GO:0033609; GO:0042866;
allko_ids K01714; K18123;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000011.1_23 12 300 evalue:5.9e-95 qcov:95.70 identity:61.90;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
metacyc_pathway_id HYDROXYPRODEG-PWY;
metacyc_pathway_name trans-4-hydroxy-L-proline degradation I;;
metacyc_pathway_type Hydroxyprolines-Degradation;;
pfam_acc PF00701;
pfam_desc Dihydrodipicolinate synthetase family;
pfam_id DHDPS;
pfam_target db:Pfam-A.hmm|PF00701.22 evalue:6.4e-48 score:162.2 best_domain_score:162.0 name:DHDPS;
sprot_desc 4-hydroxy-2-oxoglutarate aldolase, mitochondrial;
sprot_id sp|Q9DCU9|HOGA1_MOUSE;
sprot_target db:uniprot_sprot|sp|Q9DCU9|HOGA1_MOUSE 6 287 evalue:8.2e-51 qcov:93.40 identity:41.00;
11898 10774 CDS
ID metaerg.pl|09600
allgo_ids GO:0005737; GO:0044096; GO:0005524; GO:0016887; GO:0043108; GO:0043107;
allko_ids K02669;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000331.1_10 1 372 evalue:2.7e-134 qcov:99.50 identity:65.90;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00437;
pfam_desc Type II/IV secretion system protein;
pfam_id T2SSE;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:2.8e-41 score:140.6 best_domain_score:139.6 name:T2SSE;
sprot_desc Twitching mobility protein;
sprot_id sp|P24559|PILT_PSEAE;
sprot_target db:uniprot_sprot|sp|P24559|PILT_PSEAE 1 345 evalue:5.9e-67 qcov:92.20 identity:41.20;
tigrfam_acc TIGR01420;
tigrfam_desc twitching motility protein;
tigrfam_mainrole Cellular processes;
tigrfam_name pilT_fam;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR01420 evalue:2.7e-132 score:440.3 best_domain_score:440.1 name:TIGR01420;
13024 12011 CDS
ID metaerg.pl|09601
allec_ids 6.1.1.2;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005829; GO:0004830; GO:0006436;
allko_ids K01867;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000047.1_17 4 330 evalue:4.1e-137 qcov:97.00 identity:72.00;
kegg_pathway_id 00380; 00970;
kegg_pathway_name Tryptophan metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00579;
pfam_desc tRNA synthetases class I (W and Y);
pfam_id tRNA-synt_1b;
pfam_target db:Pfam-A.hmm|PF00579.25 evalue:2.1e-72 score:243.2 best_domain_score:243.0 name:tRNA-synt_1b;
sprot_desc Tryptophan--tRNA ligase;
sprot_id sp|Q9RWV7|SYW_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RWV7|SYW_DEIRA 5 324 evalue:3.1e-91 qcov:95.00 identity:50.50;
tigrfam_acc TIGR00233;
tigrfam_desc tryptophan--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name trpS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00233 evalue:3.9e-96 score:321.3 best_domain_score:321.1 name:TIGR00233;
13114 13977 CDS
ID metaerg.pl|09602
allec_ids 3.1.3.25;
allgo_ids GO:0046854; GO:0008934; GO:0052832; GO:0052833; GO:0046872; GO:0046855;
allko_ids K01092;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002501085;
genomedb_acc GCA_002501085.1;
genomedb_target db:genomedb|GCA_002501085.1|DLRL01000019.1_4 5 282 evalue:1.1e-69 qcov:96.90 identity:54.00;
kegg_pathway_id 00521; 00562;
kegg_pathway_name Streptomycin biosynthesis; Inositol phosphate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
metacyc_pathway_id PWY-2301;
metacyc_pathway_name myo-inositol biosynthesis;;
metacyc_pathway_type Cyclitols-Biosynthesis;;
pfam_acc PF00459;
pfam_desc Inositol monophosphatase family;
pfam_id Inositol_P;
pfam_target db:Pfam-A.hmm|PF00459.25 evalue:1.3e-55 score:188.1 best_domain_score:188.0 name:Inositol_P;
sprot_desc Inositol-1-monophosphatase;
sprot_id sp|Q98F59|SUHB_RHILO;
sprot_target db:uniprot_sprot|sp|Q98F59|SUHB_RHILO 48 283 evalue:1.3e-37 qcov:82.20 identity:39.40;
14541 14020 CDS
ID metaerg.pl|09603
allko_ids K13993;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000331.1_13 1 160 evalue:1.6e-44 qcov:92.50 identity:62.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF17886; PF00011;
pfam_desc HSP20-like domain found in ArsA; Hsp20/alpha crystallin family;
pfam_id ArsA_HSP20; HSP20;
pfam_target db:Pfam-A.hmm|PF17886.1 evalue:2e-15 score:55.3 best_domain_score:54.5 name:ArsA_HSP20; db:Pfam-A.hmm|PF00011.21 evalue:1.1e-19 score:69.7 best_domain_score:69.2 name:HSP20;
sprot_desc Small heat shock protein C4;
sprot_id sp|Q4UJB1|HSPC4_RICFE;
sprot_target db:uniprot_sprot|sp|Q4UJB1|HSPC4_RICFE 7 158 evalue:3.6e-19 qcov:87.90 identity:35.10;
14722 16137 CDS
ID metaerg.pl|09604
allec_ids 2.7.2.4;
allgo_ids GO:0005829; GO:0004072; GO:0005524; GO:0009090; GO:0009089;
allko_ids K12526; K12525; K12524; K00003; K00928;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25340.1 18 459 evalue:4.6e-102 qcov:93.80 identity:47.90;
kegg_pathway_id 00300; 00260;
kegg_pathway_name Lysine biosynthesis; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
metacyc_pathway_id MET-SAM-PWY; DAPLYSINESYN-PWY; PWY-5347; PWY-3001; P4-PWY; PWY-5345; P101-PWY; PWY-2941; PWY-6559; PWY-6562; PWY0-781; PWY-5097; PWY-6565; THRESYN-PWY; PWY-724; HOMOSERSYN-PWY; METSYN-PWY;
metacyc_pathway_name superpathway of S-adenosyl-L-methionine biosynthesis;; L-lysine biosynthesis I;; superpathway of L-methionine biosynthesis (transsulfuration);; superpathway of L-isoleucine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-methionine biosynthesis (by sulfhydrylation);; ectoine biosynthesis;; L-lysine biosynthesis II;; spermidine biosynthesis II;; norspermidine biosynthesis;; aspartate superpathway;; L-lysine biosynthesis VI;; superpathway of polyamine biosynthesis III;; superpathway of L-threonine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-homoserine biosynthesis;; superpathway of L-homoserine and L-methionine biosynthesis;;
metacyc_pathway_type Super-Pathways;; LYSINE-SYN;; Methionine-De-novo-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis;; LYSINE-SYN;; Spermidine-Biosynthesis;; Polyamine-Biosynthesis;; Super-Pathways;; LYSINE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; Super-Pathways; THREONINE-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis;; Methionine-De-novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00696; PF13840;
pfam_desc Amino acid kinase family; ACT domain;
pfam_id AA_kinase; ACT_7;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:8e-47 score:159.1 best_domain_score:158.6 name:AA_kinase; db:Pfam-A.hmm|PF13840.6 evalue:4.2e-07 score:28.9 best_domain_score:13.5 name:ACT_7;
sprot_desc Lysine-sensitive aspartokinase 3;
sprot_id sp|P08660|AK3_ECOLI;
sprot_target db:uniprot_sprot|sp|P08660|AK3_ECOLI 17 459 evalue:1.5e-64 qcov:94.10 identity:38.90;
tigrfam_acc TIGR00657;
tigrfam_desc aspartate kinase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name asp_kinases;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00657 evalue:4.8e-105 score:351.3 best_domain_score:351.1 name:TIGR00657;
16127 16972 CDS
ID metaerg.pl|09605
allec_ids 1.17.1.8;
allgo_ids GO:0008839; GO:0009089; GO:0055114; GO:0005737; GO:0051287; GO:0050661; GO:0016726; GO:0019877;
allko_ids K00215;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000027.1_8 4 261 evalue:1.1e-55 qcov:91.80 identity:46.70;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF05173; PF01113;
pfam_desc Dihydrodipicolinate reductase, C-terminus; Dihydrodipicolinate reductase, N-terminus;
pfam_id DapB_C; DapB_N;
pfam_target db:Pfam-A.hmm|PF05173.14 evalue:2.7e-31 score:107.4 best_domain_score:106.9 name:DapB_C; db:Pfam-A.hmm|PF01113.20 evalue:1.2e-14 score:53.8 best_domain_score:52.9 name:DapB_N;
sprot_desc 4-hydroxy-tetrahydrodipicolinate reductase;
sprot_id sp|C1D7H9|DAPB_LARHH;
sprot_target db:uniprot_sprot|sp|C1D7H9|DAPB_LARHH 6 261 evalue:4.9e-34 qcov:91.10 identity:37.80;
tigrfam_acc TIGR00036;
tigrfam_desc 4-hydroxy-tetrahydrodipicolinate reductase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapB;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00036 evalue:9.1e-41 score:139.3 best_domain_score:137.8 name:TIGR00036;
16969 17892 CDS
ID metaerg.pl|09606
allec_ids 4.3.3.7;
allgo_ids GO:0016829; GO:0005737; GO:0008840; GO:0019877; GO:0009089;
allko_ids K01714;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__AG29;s__AG29 sp003221995;
genomedb_acc GCA_003221995.1;
genomedb_target db:genomedb|GCA_003221995.1|PYP31940.1 1 301 evalue:2.9e-81 qcov:98.00 identity:53.60;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00701;
pfam_desc Dihydrodipicolinate synthetase family;
pfam_id DHDPS;
pfam_target db:Pfam-A.hmm|PF00701.22 evalue:1.8e-89 score:298.5 best_domain_score:298.3 name:DHDPS;
sprot_desc 4-hydroxy-tetrahydrodipicolinate synthase;
sprot_id sp|A1ATI8|DAPA_PELPD;
sprot_target db:uniprot_sprot|sp|A1ATI8|DAPA_PELPD 8 298 evalue:1.3e-72 qcov:94.80 identity:52.60;
tigrfam_acc TIGR00674;
tigrfam_desc 4-hydroxy-tetrahydrodipicolinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapA;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00674 evalue:4e-95 score:317.1 best_domain_score:316.9 name:TIGR00674;
17889 18749 CDS
ID metaerg.pl|09607
allko_ids K19107;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD49411.1 3 286 evalue:2.3e-96 qcov:99.30 identity:63.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00132; PF14602; PF14805;
pfam_desc Bacterial transferase hexapeptide (six repeats); Hexapeptide repeat of succinyl-transferase; Tetrahydrodipicolinate N-succinyltransferase N-terminal;
pfam_id Hexapep; Hexapep_2; THDPS_N_2;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:2.4e-10 score:39.0 best_domain_score:21.0 name:Hexapep; db:Pfam-A.hmm|PF14602.6 evalue:5.5e-09 score:34.9 best_domain_score:34.9 name:Hexapep_2; db:Pfam-A.hmm|PF14805.6 evalue:8.2e-14 score:50.8 best_domain_score:50.0 name:THDPS_N_2;
sprot_desc hypothetical protein;
sprot_id sp|P31852|TABB_PSEAJ;
sprot_target db:uniprot_sprot|sp|P31852|TABB_PSEAJ 32 286 evalue:4.0e-15 qcov:89.20 identity:43.10;
18715 19284 CDS
ID metaerg.pl|09608
genomedb_OC d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Myxococcaceae;g__Myxococcus;s__Myxococcus fulvus;
genomedb_acc GCF_900111765.1;
genomedb_target db:genomedb|GCF_900111765.1|WP_074948839.1 32 189 evalue:1.9e-46 qcov:83.60 identity:60.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
20300 19329 CDS
ID metaerg.pl|09609
allec_ids 2.7.1.-;
allgo_ids GO:0005737; GO:0005524; GO:0019200; GO:0045127; GO:0046835; GO:0006044; GO:0097172; GO:0009254;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90511.1 17 313 evalue:8.1e-50 qcov:92.00 identity:43.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
metacyc_pathway_id PLPSAL-PWY; PWY-5107; PWY0-1261; PWY-6577; LIPA-CORESYN-PWY; PWY-5381; P1-PWY; PWY0-845; LPSSYN-PWY; PWY0-163;
metacyc_pathway_name pyridoxal 5'-phosphate salvage I;; phytol salvage pathway;; anhydromuropeptides recycling I;; farnesylcysteine salvage pathway;; lipid A-core biosynthesis (E. coli K-12);; pyridine nucleotide cycling (plants);; ; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;; superpathway of lipopolysaccharide biosynthesis;; ;
metacyc_pathway_type Vitamin-B6-Biosynthesis;; DITERPENOID-SYN;; Anhydromuropeptides-Recycling;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Glycan-Biosynthesis; Lipid-Biosynthesis;; NAD-Metabolism;; ; Super-Pathways; Vitamin-B6-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;; ;
pfam_acc PF01869;
pfam_desc BadF/BadG/BcrA/BcrD ATPase family;
pfam_id BcrAD_BadFG;
pfam_target db:Pfam-A.hmm|PF01869.20 evalue:5.3e-18 score:64.7 best_domain_score:64.5 name:BcrAD_BadFG;
sprot_desc N-acetylmuramic acid/N-acetylglucosamine kinase;
sprot_id sp|Q97ML3|MURK_CLOAB;
sprot_target db:uniprot_sprot|sp|Q97ML3|MURK_CLOAB 16 252 evalue:8.2e-17 qcov:73.40 identity:28.80;
21748 20297 CDS
ID metaerg.pl|09610
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016324; GO:0070062; GO:0016021; GO:0005886; GO:0015129; GO:0140161; GO:0008028; GO:0022803; GO:0015552; GO:0006915; GO:0006811; GO:0034356; GO:0015913;
allko_ids K14388;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000331.1_15 1 469 evalue:2.4e-175 qcov:97.10 identity:69.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00474;
pfam_desc Sodium:solute symporter family;
pfam_id SSF;
pfam_target db:Pfam-A.hmm|PF00474.17 evalue:5.7e-34 score:116.9 best_domain_score:116.3 name:SSF;
sprot_desc Sodium-coupled monocarboxylate transporter 1;
sprot_id sp|Q8N695|SC5A8_HUMAN;
sprot_target db:uniprot_sprot|sp|Q8N695|SC5A8_HUMAN 1 455 evalue:4.1e-36 qcov:94.20 identity:28.50;
tigrfam_acc TIGR00813;
tigrfam_desc transporter, solute:sodium symporter (SSS) family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name sss;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR00813 evalue:1.4e-61 score:208.0 best_domain_score:207.7 name:TIGR00813;
tm_num 13;
21748 20297 transmembrane_helix
ID metaerg.pl|09611
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology o20306-20374i20435-20503o20516-20584i20702-20755o20765-20833i20852-20920o20978-21046i21107-21175o21218-21286i21395-21463o21491-21559i21578-21637o21647-21715i;
22263 21745 CDS
ID metaerg.pl|09612
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Longimonas;s__Longimonas halophila;
genomedb_acc GCF_002554705.1;
genomedb_target db:genomedb|GCF_002554705.1|WP_098062647.1 1 168 evalue:4.2e-29 qcov:97.70 identity:41.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF12893;
pfam_desc Putative lumazine-binding;
pfam_id Lumazine_bd_2;
pfam_target db:Pfam-A.hmm|PF12893.7 evalue:5.6e-05 score:23.0 best_domain_score:22.5 name:Lumazine_bd_2;
sp YES;
21745 21831 signal_peptide
ID metaerg.pl|09613
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
25626 22357 CDS
ID metaerg.pl|09614
allgo_ids GO:0004553; GO:0005975;
allko_ids K01207;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000016.1_14 30 1089 evalue:0.0e+00 qcov:97.30 identity:55.70;
kegg_pathway_id 00530; 01032;
kegg_pathway_name Aminosugars metabolism; Glycan structures - degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00144; PF00933;
pfam_desc Beta-lactamase; Glycosyl hydrolase family 3 N terminal domain;
pfam_id Beta-lactamase; Glyco_hydro_3;
pfam_target db:Pfam-A.hmm|PF00144.24 evalue:4e-61 score:206.3 best_domain_score:205.2 name:Beta-lactamase; db:Pfam-A.hmm|PF00933.21 evalue:7.7e-79 score:264.6 best_domain_score:263.4 name:Glyco_hydro_3;
sp YES;
tm_num 1;
22357 22470 lipoprotein_signal_peptide
ID metaerg.pl|09615
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
25626 22357 transmembrane_helix
ID metaerg.pl|09616
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology i22417-22485o;
27671 25623 CDS
ID metaerg.pl|09617
allec_ids 3.2.1.52;
allgo_ids GO:0004553; GO:0005975; GO:0005618; GO:0005576; GO:0005886; GO:0004563; GO:0102148; GO:0071555; GO:0009252; GO:0009254; GO:0008360;
allko_ids K01207;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000031.1_87 17 665 evalue:3.0e-195 qcov:95.20 identity:56.90;
kegg_pathway_id 00530; 01032;
kegg_pathway_name Aminosugars metabolism; Glycan structures - degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
metacyc_pathway_id PWY-6573;
metacyc_pathway_name chondroitin sulfate degradation (metazoa);;
metacyc_pathway_type Glycan-Degradation; Glycosaminoglycan-Degradation;;
pfam_acc PF00933; PF01915;
pfam_desc Glycosyl hydrolase family 3 N terminal domain; Glycosyl hydrolase family 3 C-terminal domain;
pfam_id Glyco_hydro_3; Glyco_hydro_3_C;
pfam_target db:Pfam-A.hmm|PF00933.21 evalue:3.6e-90 score:301.8 best_domain_score:299.2 name:Glyco_hydro_3; db:Pfam-A.hmm|PF01915.22 evalue:1.2e-14 score:54.0 best_domain_score:52.2 name:Glyco_hydro_3_C;
sp YES;
sprot_desc Beta-hexosaminidase;
sprot_id sp|P40406|NAGZ_BACSU;
sprot_target db:uniprot_sprot|sp|P40406|NAGZ_BACSU 106 655 evalue:2.3e-69 qcov:80.60 identity:31.60;
25623 25694 lipoprotein_signal_peptide
ID metaerg.pl|09618
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
27822 29141 CDS
ID metaerg.pl|09619
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000016.1_12 17 438 evalue:4.3e-147 qcov:96.10 identity:65.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF07075;
pfam_desc Protein of unknown function (DUF1343);
pfam_id DUF1343;
pfam_target db:Pfam-A.hmm|PF07075.11 evalue:3.1e-130 score:433.9 best_domain_score:433.7 name:DUF1343;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P40407|YBBC_BACSU;
sprot_target db:uniprot_sprot|sp|P40407|YBBC_BACSU 53 438 evalue:1.7e-97 qcov:87.90 identity:45.30;
27822 27899 lipoprotein_signal_peptide
ID metaerg.pl|09620
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
29541 29176 CDS
ID metaerg.pl|09621
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
sp YES;
29176 29268 signal_peptide
ID metaerg.pl|09622
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
29905 30417 CDS
ID metaerg.pl|09623
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000218.1_25 7 170 evalue:8.9e-24 qcov:96.50 identity:46.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF14352;
pfam_desc Domain of unknown function (DUF4402);
pfam_id DUF4402;
pfam_target db:Pfam-A.hmm|PF14352.6 evalue:7.3e-08 score:32.4 best_domain_score:29.4 name:DUF4402;
sp YES;
29905 29976 signal_peptide
ID metaerg.pl|09624
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
30492 30977 CDS
ID metaerg.pl|09625
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
sp YES;
30492 30563 signal_peptide
ID metaerg.pl|09626
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
30985 31821 CDS
ID metaerg.pl|09627
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000218.1_23 6 270 evalue:7.4e-68 qcov:95.30 identity:50.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
sp YES;
tm_num 1;
30985 31053 signal_peptide
ID metaerg.pl|09628
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
30985 31821 transmembrane_helix
ID metaerg.pl|09629
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology i31018-31086o;
31836 34559 CDS
ID metaerg.pl|09630
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000218.1_22 19 900 evalue:2.0e-191 qcov:97.20 identity:43.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF13620; PF17210;
pfam_desc Carboxypeptidase regulatory-like domain; SdrD B-like domain;
pfam_id CarboxypepD_reg; SdrD_B;
pfam_target db:Pfam-A.hmm|PF13620.6 evalue:2.9e-13 score:49.1 best_domain_score:26.5 name:CarboxypepD_reg; db:Pfam-A.hmm|PF17210.3 evalue:9.2e-09 score:34.8 best_domain_score:26.8 name:SdrD_B;
sp YES;
31836 31934 signal_peptide
ID metaerg.pl|09631
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
34623 35972 CDS
ID metaerg.pl|09632
allgo_ids GO:0005524; GO:0005737; GO:0003700; GO:0008073; GO:0043565; GO:0008134; GO:0000160; GO:0045893; GO:0010967;
allko_ids K07653; K07636; K02482; K02480; K07678; K10715; K11527; K02030; K08479; K10916; K02668; K03388; K07710; K01768; K02489; K07716; K04757; K11357; K10125; K13761; K11383; K02486; K12767; K07769; K07717; K07675; K07647; K07676; K10681; K06379; K07644; K07709; K07711; K11354; K07778; K07768; K07651; K07679; K07648; K03407; K07637; K07654; K07682; K07652; K07646; K07641; K01120; K07673; K07639; K08475; K08282; K01937; K07708; K07645; K07677; K02491; K11231; K07642; K11711; K11356; K11640; K00760; K02484; K07714;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__20CM-2-65-7;s__20CM-2-65-7 sp001915025;
genomedb_acc GCA_001915025.1;
genomedb_target db:genomedb|GCA_001915025.1|OLB51145.1 1 449 evalue:1.5e-142 qcov:100.00 identity:59.70;
kegg_pathway_id 05111; 00230; 00240; 00983; 00790; 02020; 04011; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; Drug metabolism - other enzymes; Folate biosynthesis; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00004; PF07728; PF02954; PF01078; PF00072; PF00158; PF14532;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); Bacterial regulatory protein, Fis family; Magnesium chelatase, subunit ChlI; Response regulator receiver domain; Sigma-54 interaction domain; Sigma-54 interaction domain;
pfam_id AAA; AAA_5; HTH_8; Mg_chelatase; Response_reg; Sigma54_activat; Sigma54_activ_2;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1.9e-07 score:30.8 best_domain_score:29.9 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:1.6e-11 score:43.6 best_domain_score:42.2 name:AAA_5; db:Pfam-A.hmm|PF02954.19 evalue:4.4e-13 score:48.0 best_domain_score:46.2 name:HTH_8; db:Pfam-A.hmm|PF01078.21 evalue:9.8e-07 score:27.6 best_domain_score:16.2 name:Mg_chelatase; db:Pfam-A.hmm|PF00072.24 evalue:5.7e-22 score:77.2 best_domain_score:76.4 name:Response_reg; db:Pfam-A.hmm|PF00158.26 evalue:1.4e-60 score:203.0 best_domain_score:202.5 name:Sigma54_activat; db:Pfam-A.hmm|PF14532.6 evalue:4.1e-19 score:68.3 best_domain_score:67.4 name:Sigma54_activ_2;
sprot_desc Regulatory protein AtoC;
sprot_id sp|Q06065|ATOC_ECOLI;
sprot_target db:uniprot_sprot|sp|Q06065|ATOC_ECOLI 5 448 evalue:5.0e-81 qcov:98.90 identity:39.90;
36924 36031 CDS
ID metaerg.pl|09633
allec_ids 2.6.1.21;
allgo_ids GO:0003824; GO:0047810; GO:0030170; GO:0046437; GO:0019478;
allko_ids K00824;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000089.1_2 1 289 evalue:1.6e-92 qcov:97.30 identity:60.50;
kegg_pathway_id 00472; 00360; 00550; 00473; 00310; 00330;
kegg_pathway_name D-Arginine and D-ornithine metabolism; Phenylalanine metabolism; Peptidoglycan biosynthesis; D-Alanine metabolism; Lysine degradation; Arginine and proline metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF01063;
pfam_desc Amino-transferase class IV;
pfam_id Aminotran_4;
pfam_target db:Pfam-A.hmm|PF01063.19 evalue:2.3e-42 score:144.6 best_domain_score:144.4 name:Aminotran_4;
sprot_desc D-alanine aminotransferase;
sprot_id sp|P54694|DAAA_STAHA;
sprot_target db:uniprot_sprot|sp|P54694|DAAA_STAHA 1 279 evalue:3.4e-57 qcov:93.90 identity:40.20;
37802 36933 CDS
ID metaerg.pl|09634
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000009.1_97 1 286 evalue:2.5e-90 qcov:99.00 identity:69.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF04012;
pfam_desc PspA/IM30 family;
pfam_id PspA_IM30;
pfam_target db:Pfam-A.hmm|PF04012.12 evalue:2.6e-47 score:160.5 best_domain_score:160.5 name:PspA_IM30;
38207 37806 CDS
ID metaerg.pl|09635
allgo_ids GO:0005737; GO:0050708;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000161.1_3 1 133 evalue:4.8e-41 qcov:100.00 identity:66.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF05932;
pfam_desc Tir chaperone protein (CesT) family;
pfam_id CesT;
pfam_target db:Pfam-A.hmm|PF05932.13 evalue:2.1e-06 score:27.1 best_domain_score:26.8 name:CesT;
41287 38396 CDS
ID metaerg.pl|09636
allec_ids 3.1.25.-;
allgo_ids GO:0005524; GO:0016887; GO:0005737; GO:0009380; GO:0003677; GO:0009381; GO:0008270; GO:0006289; GO:0009432;
allko_ids K02045; K06861; K01996; K02006; K03701;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000161.1_4 1 957 evalue:0.0e+00 qcov:99.40 identity:74.90;
kegg_pathway_id 03420; 02010;
kegg_pathway_name Nucleotide excision repair; ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF13555; PF00005; PF17755; PF17760;
pfam_desc P-loop containing region of AAA domain; ABC transporter; UvrA DNA-binding domain; UvrA interaction domain;
pfam_id AAA_29; ABC_tran; UvrA_DNA-bind; UvrA_inter;
pfam_target db:Pfam-A.hmm|PF13555.6 evalue:1.3e-06 score:27.3 best_domain_score:12.4 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:1.9e-19 score:69.8 best_domain_score:21.4 name:ABC_tran; db:Pfam-A.hmm|PF17755.1 evalue:8.8e-32 score:109.0 best_domain_score:104.4 name:UvrA_DNA-bind; db:Pfam-A.hmm|PF17760.1 evalue:8.8e-37 score:124.8 best_domain_score:123.8 name:UvrA_inter;
sprot_desc UvrABC system protein A;
sprot_id sp|Q89L46|UVRA_BRADU;
sprot_target db:uniprot_sprot|sp|Q89L46|UVRA_BRADU 6 957 evalue:0.0e+00 qcov:98.90 identity:59.70;
tigrfam_acc TIGR00630;
tigrfam_desc excinuclease ABC subunit A;
tigrfam_mainrole DNA metabolism;
tigrfam_name uvra;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00630 evalue:0 score:1421.0 best_domain_score:1420.8 name:TIGR00630;
42121 41288 CDS
ID metaerg.pl|09637
allec_ids 3.4.24.-;
allgo_ids GO:0004222; GO:0006508; GO:0016021; GO:0005886; GO:0008270;
allko_ids K03799;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000031.1_79 1 274 evalue:2.9e-88 qcov:98.90 identity:61.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:1.7e-40 score:138.1 best_domain_score:137.8 name:Peptidase_M48;
sprot_desc Protease HtpX homolog;
sprot_id sp|Q2S6C2|HTPX_SALRD;
sprot_target db:uniprot_sprot|sp|Q2S6C2|HTPX_SALRD 1 275 evalue:2.8e-74 qcov:99.30 identity:56.00;
tm_num 4;
42121 41288 transmembrane_helix
ID metaerg.pl|09638
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology i41306-41365o41378-41446i41702-41770o41798-41866i;
46830 42295 CDS
ID metaerg.pl|09639
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000004.1_162 18 1510 evalue:1.5e-239 qcov:98.80 identity:36.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF13502; PF04357;
pfam_desc AsmA-like C-terminal region; TamB, inner membrane protein subunit of TAM complex;
pfam_id AsmA_2; TamB;
pfam_target db:Pfam-A.hmm|PF13502.6 evalue:9e-11 score:41.0 best_domain_score:11.5 name:AsmA_2; db:Pfam-A.hmm|PF04357.13 evalue:3.4e-60 score:203.5 best_domain_score:185.1 name:TamB;
tm_num 1;
46830 42295 transmembrane_helix
ID metaerg.pl|09640
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology i42319-42387o;
49087 46832 CDS
ID metaerg.pl|09641
allgo_ids GO:0019867;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000161.1_8 44 751 evalue:1.9e-195 qcov:94.30 identity:48.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF01103; PF07244; PF08479;
pfam_desc Surface antigen; Surface antigen variable number repeat; POTRA domain, ShlB-type;
pfam_id Bac_surface_Ag; POTRA; POTRA_2;
pfam_target db:Pfam-A.hmm|PF01103.23 evalue:2e-37 score:128.7 best_domain_score:128.1 name:Bac_surface_Ag; db:Pfam-A.hmm|PF07244.15 evalue:2.6e-23 score:81.6 best_domain_score:31.9 name:POTRA; db:Pfam-A.hmm|PF08479.11 evalue:2.7e-06 score:26.4 best_domain_score:19.8 name:POTRA_2;
sp YES;
tm_num 1;
46832 46918 signal_peptide
ID metaerg.pl|09642
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
49087 46832 transmembrane_helix
ID metaerg.pl|09643
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology i46850-46918o;
49926 49084 CDS
ID metaerg.pl|09644
allgo_ids GO:0016787;
allko_ids K01120;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000026.1_77 1 277 evalue:1.0e-101 qcov:98.90 identity:63.90;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:4.6e-17 score:62.4 best_domain_score:61.7 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:3.5e-11 score:42.8 best_domain_score:40.5 name:Metallophos_2;
51051 50011 CDS
ID metaerg.pl|09645
allec_ids 2.3.1.234;
allgo_ids GO:0005737; GO:0005506; GO:0004222; GO:0061711; GO:0002949;
allko_ids K01409; K00924; K07174;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000026.1_75 1 344 evalue:2.7e-128 qcov:99.40 identity:69.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00814;
pfam_desc Glycoprotease family;
pfam_id Peptidase_M22;
pfam_target db:Pfam-A.hmm|PF00814.25 evalue:4.5e-90 score:301.3 best_domain_score:301.1 name:Peptidase_M22;
sprot_desc tRNA N6-adenosine threonylcarbamoyltransferase;
sprot_id sp|C1A601|TSAD_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A601|TSAD_GEMAT 2 341 evalue:4.7e-103 qcov:98.30 identity:58.60;
tigrfam_acc TIGR00329; TIGR03723;
tigrfam_desc metallohydrolase, glycoprotease/Kae1 family; tRNA threonylcarbamoyl adenosine modification protein TsaD;
tigrfam_mainrole Protein fate; Protein synthesis;
tigrfam_name gcp_kae1; T6A_TsaD_YgjD;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides; tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00329 evalue:2.2e-96 score:321.8 best_domain_score:321.7 name:TIGR00329; db:TIGRFAMs.hmm|TIGR03723 evalue:4e-117 score:390.0 best_domain_score:389.8 name:TIGR03723;
52055 51063 CDS
ID metaerg.pl|09646
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000009.1_89 3 309 evalue:1.0e-36 qcov:93.00 identity:33.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF07949;
pfam_desc YbbR-like protein;
pfam_id YbbR;
pfam_target db:Pfam-A.hmm|PF07949.12 evalue:1.4e-14 score:53.4 best_domain_score:33.3 name:YbbR;
52629 52060 CDS
ID metaerg.pl|09647
allgo_ids GO:0016209; GO:0016491; GO:0055114;
allko_ids K03564; K11065; K12267; K03386;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000004.1_156 1 185 evalue:4.1e-54 qcov:97.90 identity:56.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00578; PF00255; PF08534; PF02630; PF00085; PF13905;
pfam_desc AhpC/TSA family; Glutathione peroxidase; Redoxin; SCO1/SenC; Thioredoxin; Thioredoxin-like;
pfam_id AhpC-TSA; GSHPx; Redoxin; SCO1-SenC; Thioredoxin; Thioredoxin_8;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:6.7e-30 score:102.8 best_domain_score:102.5 name:AhpC-TSA; db:Pfam-A.hmm|PF00255.19 evalue:2.4e-05 score:23.1 best_domain_score:22.7 name:GSHPx; db:Pfam-A.hmm|PF08534.10 evalue:5.3e-21 score:74.1 best_domain_score:73.7 name:Redoxin; db:Pfam-A.hmm|PF02630.14 evalue:1.4e-05 score:24.3 best_domain_score:23.7 name:SCO1-SenC; db:Pfam-A.hmm|PF00085.20 evalue:7.4e-08 score:31.6 best_domain_score:28.4 name:Thioredoxin; db:Pfam-A.hmm|PF13905.6 evalue:7.8e-13 score:47.8 best_domain_score:46.7 name:Thioredoxin_8;
sp YES;
tm_num 1;
52060 52164 signal_peptide
ID metaerg.pl|09648
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
52629 52060 transmembrane_helix
ID metaerg.pl|09649
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology i52078-52146o;
53487 52633 CDS
ID metaerg.pl|09650
allec_ids 2.7.11.1;
allgo_ids GO:0005524; GO:0004674;
allko_ids K08282; K08884; K03587;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000004.1_155 1 274 evalue:3.8e-43 qcov:96.50 identity:42.00;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF03793;
pfam_desc PASTA domain;
pfam_id PASTA;
pfam_target db:Pfam-A.hmm|PF03793.19 evalue:1.3e-30 score:104.3 best_domain_score:44.9 name:PASTA;
sprot_desc Serine/threonine-protein kinase PK-1;
sprot_id sp|Q9KIG4|PK1_STRTO;
sprot_target db:uniprot_sprot|sp|Q9KIG4|PK1_STRTO 39 269 evalue:2.3e-18 qcov:81.30 identity:30.90;
tm_num 1;
53487 52633 transmembrane_helix
ID metaerg.pl|09651
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology i52738-52806o;
54690 53521 CDS
ID metaerg.pl|09652
allec_ids 2.1.1.176;
allgo_ids GO:0008168; GO:0005737; GO:0003723; GO:0016434; GO:0006355;
allko_ids K03500;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000004.1_154 3 388 evalue:3.8e-94 qcov:99.20 identity:51.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF01189; PF01029;
pfam_desc 16S rRNA methyltransferase RsmB/F; NusB family;
pfam_id Methyltr_RsmB-F; NusB;
pfam_target db:Pfam-A.hmm|PF01189.17 evalue:1.2e-41 score:141.9 best_domain_score:141.4 name:Methyltr_RsmB-F; db:Pfam-A.hmm|PF01029.18 evalue:7.1e-12 score:44.9 best_domain_score:44.4 name:NusB;
sprot_desc Ribosomal RNA small subunit methyltransferase B;
sprot_id sp|B2VK95|RSMB_ERWT9;
sprot_target db:uniprot_sprot|sp|B2VK95|RSMB_ERWT9 1 386 evalue:6.4e-40 qcov:99.20 identity:32.80;
55655 54843 CDS
ID metaerg.pl|09653
allec_ids 2.8.1.10;
allgo_ids GO:0005737; GO:0016783; GO:0009228; GO:0009229;
allko_ids K03149;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000219.1_21 15 270 evalue:1.1e-111 qcov:94.80 identity:80.10;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF05690;
pfam_desc Thiazole biosynthesis protein ThiG;
pfam_id ThiG;
pfam_target db:Pfam-A.hmm|PF05690.14 evalue:1e-104 score:348.5 best_domain_score:348.3 name:ThiG;
sprot_desc Thiazole synthase;
sprot_id sp|Q39RH2|THIG_GEOMG;
sprot_target db:uniprot_sprot|sp|Q39RH2|THIG_GEOMG 11 270 evalue:2.3e-73 qcov:96.30 identity:56.90;
55949 55716 CDS
ID metaerg.pl|09654
allec_ids 2.8.1.10;
allgo_ids GO:0005737; GO:0016783; GO:0009228; GO:0009229;
allko_ids K03149;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__UBA6174;s__UBA6174 sp002422945;
genomedb_acc GCA_002422945.1;
genomedb_target db:genomedb|GCA_002422945.1|DITW01000089.1_5 11 77 evalue:2.2e-14 qcov:87.00 identity:61.20;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF02597;
pfam_desc ThiS family;
pfam_id ThiS;
pfam_target db:Pfam-A.hmm|PF02597.20 evalue:2.7e-14 score:52.8 best_domain_score:52.7 name:ThiS;
sprot_desc Thiazole synthase;
sprot_id sp|A0L5E8|THIG_MAGMM;
sprot_target db:uniprot_sprot|sp|A0L5E8|THIG_MAGMM 12 77 evalue:1.3e-08 qcov:85.70 identity:43.90;
tigrfam_acc TIGR01683;
tigrfam_desc thiamine biosynthesis protein ThiS;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name thiS;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR01683 evalue:5.3e-23 score:80.3 best_domain_score:80.1 name:TIGR01683;
56605 55946 CDS
ID metaerg.pl|09655
allec_ids 2.5.1.3;
allgo_ids GO:0000287; GO:0004789; GO:0009228; GO:0009229;
allko_ids K00788;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000026.1_68 1 210 evalue:4.2e-42 qcov:95.90 identity:49.10;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
metacyc_pathway_id THISYN-PWY; THISYNARA-PWY;
metacyc_pathway_name superpathway of thiamine diphosphate biosynthesis I;; superpathway of thiamine diphosphate biosynthesis III (eukaryotes);;
metacyc_pathway_type Super-Pathways; Thiamine-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;;
pfam_acc PF02581;
pfam_desc Thiamine monophosphate synthase;
pfam_id TMP-TENI;
pfam_target db:Pfam-A.hmm|PF02581.17 evalue:3e-34 score:117.2 best_domain_score:116.9 name:TMP-TENI;
sprot_desc Thiamine-phosphate synthase;
sprot_id sp|Q24XQ0|THIE_DESHY;
sprot_target db:uniprot_sprot|sp|Q24XQ0|THIE_DESHY 5 202 evalue:1.6e-16 qcov:90.40 identity:30.90;
57561 56617 CDS
ID metaerg.pl|09656
allec_ids 2.1.2.9;
allgo_ids GO:0009058; GO:0016742; GO:0004479;
allko_ids K00604;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000219.1_18 1 313 evalue:4.2e-104 qcov:99.70 identity:64.20;
kegg_pathway_id 00271; 00670; 00970;
kegg_pathway_name Methionine metabolism; One carbon pool by folate; Aminoacyl-tRNA biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF02911; PF00551;
pfam_desc Formyl transferase, C-terminal domain; Formyl transferase;
pfam_id Formyl_trans_C; Formyl_trans_N;
pfam_target db:Pfam-A.hmm|PF02911.18 evalue:1.2e-25 score:88.9 best_domain_score:88.2 name:Formyl_trans_C; db:Pfam-A.hmm|PF00551.19 evalue:1.2e-41 score:141.6 best_domain_score:141.3 name:Formyl_trans_N;
sprot_desc Methionyl-tRNA formyltransferase;
sprot_id sp|Q6AQ97|FMT_DESPS;
sprot_target db:uniprot_sprot|sp|Q6AQ97|FMT_DESPS 1 304 evalue:1.6e-70 qcov:96.80 identity:48.70;
tigrfam_acc TIGR00460;
tigrfam_desc methionyl-tRNA formyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name fmt;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00460 evalue:1.5e-82 score:276.4 best_domain_score:276.3 name:TIGR00460;
58073 57558 CDS
ID metaerg.pl|09657
allec_ids 3.5.1.88;
allgo_ids GO:0046872; GO:0042586; GO:0006412;
allko_ids K01462;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000047.1_51 1 169 evalue:5.6e-50 qcov:98.80 identity:58.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF01327;
pfam_desc Polypeptide deformylase;
pfam_id Pep_deformylase;
pfam_target db:Pfam-A.hmm|PF01327.21 evalue:1.2e-50 score:170.5 best_domain_score:170.3 name:Pep_deformylase;
sprot_desc Peptide deformylase;
sprot_id sp|P63913|DEF_BRUME;
sprot_target db:uniprot_sprot|sp|P63913|DEF_BRUME 1 169 evalue:1.1e-39 qcov:98.80 identity:49.40;
tigrfam_acc TIGR00079;
tigrfam_desc peptide deformylase;
tigrfam_mainrole Protein fate;
tigrfam_name pept_deformyl;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00079 evalue:5.5e-52 score:174.7 best_domain_score:174.5 name:TIGR00079;
58381 58079 CDS
ID metaerg.pl|09658
allgo_ids GO:0016021; GO:0005886; GO:0015031;
allko_ids K03210;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000026.1_65 1 96 evalue:9.0e-24 qcov:96.00 identity:58.30;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF02699;
pfam_desc Preprotein translocase subunit;
pfam_id YajC;
pfam_target db:Pfam-A.hmm|PF02699.15 evalue:2.2e-27 score:94.0 best_domain_score:93.8 name:YajC;
sprot_desc Sec translocon accessory complex subunit YrbF;
sprot_id sp|O32052|YRBF_BACSU;
sprot_target db:uniprot_sprot|sp|O32052|YRBF_BACSU 14 87 evalue:7.7e-14 qcov:74.00 identity:48.60;
tigrfam_acc TIGR00739;
tigrfam_desc preprotein translocase, YajC subunit;
tigrfam_mainrole Protein fate;
tigrfam_name yajC;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00739 evalue:2.5e-26 score:90.7 best_domain_score:90.5 name:TIGR00739;
tm_num 1;
58381 58079 transmembrane_helix
ID metaerg.pl|09659
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology o58106-58165i;
59642 58479 CDS
ID metaerg.pl|09660
allec_ids 2.4.2.29;
allgo_ids GO:0006400; GO:0016763; GO:0046872; GO:0008479; GO:0008616; GO:0101030;
allko_ids K00773;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002348465;
genomedb_acc GCA_002348465.1;
genomedb_target db:genomedb|GCA_002348465.1|DEBI01000092.1_3 5 379 evalue:3.7e-158 qcov:96.90 identity:69.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF01702;
pfam_desc Queuine tRNA-ribosyltransferase;
pfam_id TGT;
pfam_target db:Pfam-A.hmm|PF01702.18 evalue:1.5e-134 score:447.8 best_domain_score:447.5 name:TGT;
sprot_desc Queuine tRNA-ribosyltransferase;
sprot_id sp|Q67Q92|TGT_SYMTH;
sprot_target db:uniprot_sprot|sp|Q67Q92|TGT_SYMTH 15 385 evalue:2.0e-110 qcov:95.90 identity:54.40;
tigrfam_acc TIGR00430; TIGR00449;
tigrfam_desc tRNA-guanine transglycosylase; tRNA-guanine family transglycosylase;
tigrfam_mainrole Protein synthesis; Protein synthesis;
tigrfam_name Q_tRNA_tgt; tgt_general;
tigrfam_sub1role tRNA and rRNA base modification; tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00430 evalue:2.6e-142 score:473.3 best_domain_score:473.1 name:TIGR00430; db:TIGRFAMs.hmm|TIGR00449 evalue:2.4e-138 score:460.1 best_domain_score:459.9 name:TIGR00449;
60706 59639 CDS
ID metaerg.pl|09661
allec_ids 2.4.99.17;
allgo_ids GO:0008616; GO:0016740; GO:0016853; GO:0005737;
allko_ids K07568;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25670.1 4 345 evalue:1.3e-114 qcov:96.30 identity:61.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF02547;
pfam_desc Queuosine biosynthesis protein;
pfam_id Queuosine_synth;
pfam_target db:Pfam-A.hmm|PF02547.15 evalue:3.2e-130 score:433.2 best_domain_score:433.1 name:Queuosine_synth;
sprot_desc S-adenosylmethionine:tRNA ribosyltransferase-isomerase;
sprot_id sp|A7H9Y1|QUEA_ANADF;
sprot_target db:uniprot_sprot|sp|A7H9Y1|QUEA_ANADF 7 347 evalue:1.4e-94 qcov:96.10 identity:53.90;
tigrfam_acc TIGR00113;
tigrfam_desc S-adenosylmethionine:tRNA ribosyltransferase-isomerase;
tigrfam_mainrole Protein synthesis;
tigrfam_name queA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00113 evalue:1.1e-117 score:392.0 best_domain_score:391.8 name:TIGR00113;
61364 60714 CDS
ID metaerg.pl|09662
allec_ids 3.6.4.12;
allgo_ids GO:0003677; GO:0006281; GO:0006310; GO:0009378; GO:0005524; GO:0009432;
allko_ids K03551;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25671.1 1 215 evalue:2.1e-86 qcov:99.50 identity:75.20;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF17864; PF05491; PF05496;
pfam_desc RuvB AAA lid domain; RuvB C-terminal winged helix domain; Holliday junction DNA helicase RuvB P-loop domain;
pfam_id AAA_lid_4; RuvB_C; RuvB_N;
pfam_target db:Pfam-A.hmm|PF17864.1 evalue:2.1e-33 score:113.1 best_domain_score:112.4 name:AAA_lid_4; db:Pfam-A.hmm|PF05491.13 evalue:1.2e-25 score:88.4 best_domain_score:87.8 name:RuvB_C; db:Pfam-A.hmm|PF05496.12 evalue:4.1e-16 score:58.4 best_domain_score:57.7 name:RuvB_N;
sprot_desc Holliday junction ATP-dependent DNA helicase RuvB;
sprot_id sp|C1A611|RUVB_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A611|RUVB_GEMAT 1 214 evalue:9.5e-78 qcov:99.10 identity:65.90;
61563 61474 tRNA
ID metaerg.pl|09663
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
name tRNA_???_ct;
62347 61748 CDS
ID metaerg.pl|09664
allec_ids 3.6.4.12;
allgo_ids GO:0005524; GO:0006281; GO:0006310; GO:0009378; GO:0009379; GO:0003677; GO:0009432;
allko_ids K03550;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000219.1_5 1 199 evalue:1.3e-50 qcov:100.00 identity:59.30;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF14520; PF07499; PF01330;
pfam_desc Helix-hairpin-helix domain; RuvA, C-terminal domain; RuvA N terminal domain;
pfam_id HHH_5; RuvA_C; RuvA_N;
pfam_target db:Pfam-A.hmm|PF14520.6 evalue:8.3e-13 score:48.0 best_domain_score:46.8 name:HHH_5; db:Pfam-A.hmm|PF07499.13 evalue:0.00011 score:21.8 best_domain_score:20.5 name:RuvA_C; db:Pfam-A.hmm|PF01330.21 evalue:1.8e-12 score:46.4 best_domain_score:44.4 name:RuvA_N;
sprot_desc Holliday junction ATP-dependent DNA helicase RuvA;
sprot_id sp|C1A615|RUVA_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A615|RUVA_GEMAT 1 197 evalue:5.6e-32 qcov:99.00 identity:41.60;
tigrfam_acc TIGR00084;
tigrfam_desc Holliday junction DNA helicase RuvA;
tigrfam_mainrole DNA metabolism;
tigrfam_name ruvA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00084 evalue:2.2e-38 score:130.8 best_domain_score:130.6 name:TIGR00084;
62901 62344 CDS
ID metaerg.pl|09665
allec_ids 3.1.22.4;
allgo_ids GO:0004520; GO:0006281; GO:0006310; GO:0008821; GO:0000287; GO:0003676;
allko_ids K01159;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25544.1 13 167 evalue:4.8e-47 qcov:83.80 identity:61.90;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF02075;
pfam_desc Crossover junction endodeoxyribonuclease RuvC;
pfam_id RuvC;
pfam_target db:Pfam-A.hmm|PF02075.17 evalue:1.7e-48 score:163.5 best_domain_score:163.3 name:RuvC;
sprot_desc Crossover junction endodeoxyribonuclease RuvC;
sprot_id sp|B2A5L6|RUVC_NATTJ;
sprot_target db:uniprot_sprot|sp|B2A5L6|RUVC_NATTJ 12 163 evalue:4.4e-31 qcov:82.20 identity:40.80;
tigrfam_acc TIGR00228;
tigrfam_desc crossover junction endodeoxyribonuclease RuvC;
tigrfam_mainrole DNA metabolism;
tigrfam_name ruvC;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00228 evalue:1.2e-40 score:138.2 best_domain_score:137.9 name:TIGR00228;
63647 62898 CDS
ID metaerg.pl|09666
allgo_ids GO:0005737; GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89715.1 1 249 evalue:1.2e-101 qcov:100.00 identity:75.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF01709;
pfam_desc Transcriptional regulator;
pfam_id Transcrip_reg;
pfam_target db:Pfam-A.hmm|PF01709.20 evalue:2.4e-91 score:304.7 best_domain_score:304.5 name:Transcrip_reg;
sprot_desc Probable transcriptional regulatory protein Plut_1643;
sprot_id sp|Q3B2D4|Y1643_CHLL7;
sprot_target db:uniprot_sprot|sp|Q3B2D4|Y1643_CHLL7 1 244 evalue:5.1e-75 qcov:98.00 identity:55.10;
tigrfam_acc TIGR01033;
tigrfam_desc DNA-binding regulatory protein, YebC/PmpR family;
tigrfam_mainrole Regulatory functions;
tigrfam_name TIGR01033;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01033 evalue:1e-93 score:312.6 best_domain_score:312.5 name:TIGR01033;
63949 65607 CDS
ID metaerg.pl|09667
allec_ids 2.3.2.2;
allgo_ids GO:0036374; GO:0102953; GO:0103068; GO:0006751;
allko_ids K00681;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__20CM-4-69-16;s__20CM-4-69-16 sp003220795;
genomedb_acc GCA_003220795.1;
genomedb_target db:genomedb|GCA_003220795.1|PYO31356.1 1 552 evalue:4.1e-203 qcov:100.00 identity:64.30;
kegg_pathway_id 00590; 00450; 00480; 00430; 00460;
kegg_pathway_name Arachidonic acid metabolism; Selenoamino acid metabolism; Glutathione metabolism; Taurine and hypotaurine metabolism; Cyanoamino acid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
metacyc_pathway_id PWY-4041; PWY-5826;
metacyc_pathway_name γ-glutamyl cycle;; hypoglycin biosynthesis;;
metacyc_pathway_type Reductants; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;;
pfam_acc PF01019;
pfam_desc Gamma-glutamyltranspeptidase;
pfam_id G_glu_transpept;
pfam_target db:Pfam-A.hmm|PF01019.21 evalue:3.6e-153 score:510.3 best_domain_score:510.0 name:G_glu_transpept;
sprot_desc Glutathione hydrolase-like YwrD proenzyme;
sprot_id sp|O05218|YWRD_BACSU;
sprot_target db:uniprot_sprot|sp|O05218|YWRD_BACSU 28 551 evalue:7.8e-84 qcov:94.90 identity:36.80;
tigrfam_acc TIGR00066;
tigrfam_desc gamma-glutamyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name g_glut_trans;
tigrfam_sub1role Glutathione and analogs;
tigrfam_target db:TIGRFAMs.hmm|TIGR00066 evalue:6.1e-113 score:377.2 best_domain_score:377.0 name:TIGR00066;
65621 68971 CDS
ID metaerg.pl|09668
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06195.1 29 1114 evalue:1.2e-182 qcov:97.30 identity:36.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF13620;
pfam_desc Carboxypeptidase regulatory-like domain;
pfam_id CarboxypepD_reg;
pfam_target db:Pfam-A.hmm|PF13620.6 evalue:4.5e-14 score:51.7 best_domain_score:47.4 name:CarboxypepD_reg;
69040 70179 CDS
ID metaerg.pl|09669
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Spirosomaceae;g__Spirosoma;s__Spirosoma spitsbergense;
genomedb_acc GCF_000374085.1;
genomedb_target db:genomedb|GCF_000374085.1|WP_020605357.1 52 378 evalue:3.6e-73 qcov:86.30 identity:42.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
sp YES;
tm_num 1;
69040 69183 signal_peptide
ID metaerg.pl|09670
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
69040 70179 transmembrane_helix
ID metaerg.pl|09671
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology i69100-69159o;
71812 70151 CDS
ID metaerg.pl|09672
allec_ids 2.7.13.3;
allgo_ids GO:0000155; GO:0007165; GO:0016021; GO:0005886; GO:0004673; GO:0018106; GO:0000160;
allko_ids K07646; K07641; K13598; K01120; K07673; K07639; K08475; K07652; K07654; K07777; K07649; K00936; K07682; K03407; K07637; K02478; K07679; K07648; K07651; K07698; K07718; K11354; K07683; K07778; K11633; K02575; K07768; K00873; K07711; K11328; K13533; K00760; K02484; K11356; K11640; K11711; K07642; K07643; K11231; K13490; K02491; K07708; K07645; K07677; K07704; K10909; K08282; K01937; K02489; K07697; K07716; K07710; K07640; K01768; K07656; K02668; K03388; K07674; K08479; K10916; K13587; K11527; K02030; K07678; K10715; K14489; K02482; K08801; K02480; K07638; K07653; K07636; K13532; K07709; K07644; K01769; K07650; K10681; K07676; K06379; K07647; K07680; K10942; K13040; K07717; K07675; K13761; K02486; K11383; K12767; K11520; K14509; K07769; K04757; K11357; K10125; K11629;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__20CM-2-65-7;s__20CM-2-65-7 sp003221985;
genomedb_acc GCA_003221985.1;
genomedb_target db:genomedb|GCA_003221985.1|PYP38637.1 15 534 evalue:1.1e-78 qcov:94.00 identity:38.60;
kegg_pathway_id 02020; 04011; 00620; 03090; 00790; 00710; 00010; 00983; 00230; 05111; 00240;
kegg_pathway_name Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system; Folate biosynthesis; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Drug metabolism - other enzymes; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF02518; PF00512; PF00989; PF08448; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; PAS; PAS_4; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:2.3e-19 score:69.2 best_domain_score:68.2 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.3e-08 score:34.0 best_domain_score:34.0 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:8.3e-06 score:25.0 best_domain_score:23.6 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:1.1e-06 score:28.1 best_domain_score:25.9 name:PAS_4; db:Pfam-A.hmm|PF00072.24 evalue:1.3e-20 score:72.8 best_domain_score:72.1 name:Response_reg;
sprot_desc Sensor kinase CckA;
sprot_id sp|P0DOA0|CCKA_BRUA2;
sprot_target db:uniprot_sprot|sp|P0DOA0|CCKA_BRUA2 44 552 evalue:1.0e-38 qcov:92.00 identity:27.60;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:2.7e-11 score:42.8 best_domain_score:38.7 name:TIGR00229;
72307 71849 CDS
ID metaerg.pl|09673
allgo_ids GO:0000160; GO:0005524; GO:0003677; GO:0042128; GO:0006355;
allko_ids K03407; K07654; K07682; K07641; K07646; K01120; K07673; K07778; K02575; K07648; K07642; K11711; K02484; K07708; K07677; K11231; K02668; K03388; K07710; K07716; K07653; K07636; K02482; K02480; K10715; K11527; K10681; K07676; K07644; K04757; K10125; K11357; K12767; K07675; K07647; K07684;
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales;f__Syntrophobacteraceae;g__CG2-30-61-12;s__CG2-30-61-12 sp001873705;
genomedb_acc GCA_001873705.1;
genomedb_target db:genomedb|GCA_001873705.1|OIP89012.1 14 151 evalue:8.0e-32 qcov:90.80 identity:50.30;
kegg_pathway_id 04011; 02020; 03090; 00230; 00790;
kegg_pathway_name MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Purine metabolism; Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:4.5e-16 score:58.2 best_domain_score:58.1 name:Response_reg;
sprot_desc Nitrate/nitrite response regulator protein NarL;
sprot_id sp|P0AF30|NARL_ECO57;
sprot_target db:uniprot_sprot|sp|P0AF30|NARL_ECO57 14 124 evalue:1.1e-08 qcov:73.00 identity:33.30;
73749 72304 CDS
ID metaerg.pl|09674
allgo_ids GO:0000155; GO:0007165;
allko_ids K07679; K02478; K07648; K07651; K11623; K07718; K07698; K07778; K07683; K11354; K11633; K07768; K07711; K08884; K13533; K11328; K07641; K07646; K07639; K08475; K07673; K07652; K07654; K00936; K07649; K07682; K07777; K03407; K07637; K11231; K07643; K02491; K01090; K07708; K07677; K07645; K10909; K07704; K08282; K02484; K11356; K04486; K11640; K11711; K07642; K11527; K02030; K13587; K10715; K07678; K08801; K02482; K14489; K02480; K07653; K07638; K07636; K02489; K07716; K07640; K07710; K07656; K01768; K02668; K03388; K07674; K08479; K10916; K07647; K07680; K13040; K10942; K07675; K07717; K12767; K11383; K02486; K11520; K07769; K14509; K04757; K10125; K11629; K02342; K11357; K07709; K07644; K01769; K07650; K06379; K10681; K07676;
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Desulfobacteria;o__Desulfatiglandales;f__HGW-15;g__HGW-15;s__HGW-15 sp002840535;
genomedb_acc GCA_002840535.1;
genomedb_target db:genomedb|GCA_002840535.1|PKN65756.1 80 463 evalue:6.2e-62 qcov:79.80 identity:37.30;
kegg_pathway_id 00340; 00790; 03090; 02020; 04011; 03030; 05111; 00230;
kegg_pathway_name Histidine metabolism; Folate biosynthesis; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; DNA replication; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF02518; PF00512; PF00989; PF08447; PF08448; PF13426;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS domain;
pfam_id HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_9;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:5.4e-20 score:71.2 best_domain_score:70.6 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:2.9e-12 score:45.7 best_domain_score:43.2 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:4.2e-08 score:32.4 best_domain_score:31.6 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:2.5e-13 score:49.3 best_domain_score:47.3 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:1.2e-12 score:47.3 best_domain_score:45.8 name:PAS_4; db:Pfam-A.hmm|PF13426.7 evalue:6.3e-07 score:28.8 best_domain_score:27.2 name:PAS_9;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.6e-23 score:82.4 best_domain_score:80.9 name:TIGR00229;
tm_num 2;
73749 72304 transmembrane_helix
ID metaerg.pl|09675
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology i72340-72408o72451-72519i;
74603 73839 CDS
ID metaerg.pl|09676
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Helicobacteraceae;g__Wolinella;s__Wolinella succinogenes;
genomedb_acc GCF_000196135.1;
genomedb_target db:genomedb|GCF_000196135.1|WP_011138159.1 24 243 evalue:4.7e-29 qcov:86.60 identity:38.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF09335;
pfam_desc SNARE associated Golgi protein;
pfam_id SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF09335.11 evalue:2.1e-21 score:75.9 best_domain_score:75.9 name:SNARE_assoc;
sprot_desc TVP38/TMEM64 family inner membrane protein YdjZ;
sprot_id sp|P76221|YDJZ_ECOLI;
sprot_target db:uniprot_sprot|sp|P76221|YDJZ_ECOLI 61 243 evalue:1.3e-25 qcov:72.00 identity:38.30;
tm_num 5;
74603 73839 transmembrane_helix
ID metaerg.pl|09677
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology o73896-73964i74040-74108o74151-74219i74403-74471o74481-74549i;
74720 76096 CDS
ID metaerg.pl|09678
allgo_ids GO:0016787;
allko_ids K01270;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91825.1 31 453 evalue:2.7e-144 qcov:92.40 identity:62.30;
kegg_pathway_id 00410; 00340; 00480; 00252; 00220;
kegg_pathway_name beta-Alanine metabolism; Histidine metabolism; Glutathione metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF07687; PF01546; PF04389; PF05343;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40; Peptidase family M28; M42 glutamyl aminopeptidase;
pfam_id M20_dimer; Peptidase_M20; Peptidase_M28; Peptidase_M42;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:1.3e-05 score:24.4 best_domain_score:23.2 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:3.9e-18 score:65.2 best_domain_score:64.4 name:Peptidase_M20; db:Pfam-A.hmm|PF04389.17 evalue:1.8e-10 score:40.1 best_domain_score:39.2 name:Peptidase_M28; db:Pfam-A.hmm|PF05343.14 evalue:0.00013 score:20.4 best_domain_score:12.0 name:Peptidase_M42;
sp YES;
74720 74788 lipoprotein_signal_peptide
ID metaerg.pl|09679
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
76612 76100 CDS
ID metaerg.pl|09680
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
tm_num 3;
76612 76100 transmembrane_helix
ID metaerg.pl|09681
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology o76109-76162i76256-76324o76334-76387i;
76903 77820 CDS
ID metaerg.pl|09682
allgo_ids GO:0004222; GO:0006508; GO:0008270; GO:0031012;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2982;s__UBA2982 sp002347035;
genomedb_acc GCA_002347035.1;
genomedb_target db:genomedb|GCA_002347035.1|DEAM01000027.1_56 18 301 evalue:2.5e-37 qcov:93.10 identity:32.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00413;
pfam_desc Matrixin;
pfam_id Peptidase_M10;
pfam_target db:Pfam-A.hmm|PF00413.24 evalue:8e-07 score:28.3 best_domain_score:26.2 name:Peptidase_M10;
sp YES;
76903 76944 signal_peptide
ID metaerg.pl|09683
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
80155 77789 CDS
ID metaerg.pl|09684
allgo_ids GO:0004181; GO:0006508; GO:0008270;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000226.1_41 22 782 evalue:2.8e-245 qcov:96.60 identity:54.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00246;
pfam_desc Zinc carboxypeptidase;
pfam_id Peptidase_M14;
pfam_target db:Pfam-A.hmm|PF00246.24 evalue:1.4e-16 score:60.3 best_domain_score:59.8 name:Peptidase_M14;
sp YES;
77789 77896 signal_peptide
ID metaerg.pl|09685
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
81108 80221 CDS
ID metaerg.pl|09686
allgo_ids GO:0006890; GO:0016021;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000004.1_140 13 293 evalue:8.1e-73 qcov:95.30 identity:55.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF08551; PF01694;
pfam_desc Eukaryotic integral membrane protein (DUF1751); Rhomboid family;
pfam_id DUF1751; Rhomboid;
pfam_target db:Pfam-A.hmm|PF08551.10 evalue:4.7e-12 score:45.6 best_domain_score:44.7 name:DUF1751; db:Pfam-A.hmm|PF01694.22 evalue:4e-34 score:117.0 best_domain_score:116.0 name:Rhomboid;
tm_num 6;
81108 80221 transmembrane_helix
ID metaerg.pl|09687
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
topology i80296-80364o80407-80475i80512-80571o80584-80637i80656-80724o80752-80811i;
82221 81172 CDS
ID metaerg.pl|09688
allec_ids 6.3.2.4;
allgo_ids GO:0005524; GO:0046872; GO:0005829; GO:0008716; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01921;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04848.1 4 340 evalue:4.0e-111 qcov:96.60 identity:61.40;
kegg_pathway_id 00550; 00473;
kegg_pathway_name Peptidoglycan biosynthesis; D-Alanine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
metacyc_pathway_id PWY-6387; PWY-6385; PWY-5265; PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6386; PWY-6470;
metacyc_pathway_name UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF02655; PF02786; PF07478; PF01820;
pfam_desc ATP-grasp domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus;
pfam_id ATP-grasp_3; CPSase_L_D2; Dala_Dala_lig_C; Dala_Dala_lig_N;
pfam_target db:Pfam-A.hmm|PF02655.14 evalue:5.8e-07 score:28.9 best_domain_score:27.8 name:ATP-grasp_3; db:Pfam-A.hmm|PF02786.17 evalue:6.6e-05 score:21.7 best_domain_score:20.9 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:3.3e-48 score:163.2 best_domain_score:162.8 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF01820.21 evalue:2.5e-23 score:81.7 best_domain_score:81.1 name:Dala_Dala_lig_N;
sprot_desc D-alanine--D-alanine ligase A;
sprot_id sp|Q9HWI0|DDLA_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HWI0|DDLA_PSEAE 3 340 evalue:1.8e-97 qcov:96.80 identity:55.50;
tigrfam_acc TIGR01205;
tigrfam_desc D-alanine--D-alanine ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name D_ala_D_alaTIGR;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01205 evalue:1.1e-85 score:286.5 best_domain_score:286.3 name:TIGR01205;
83264 82218 CDS
ID metaerg.pl|09689
allec_ids 4.2.1.22;
allgo_ids GO:0005737; GO:0004122; GO:0019343;
allko_ids K12339; K01697; K01733; K01754; K13034; K01738; K10150;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000337.1_43 13 337 evalue:2.2e-146 qcov:93.40 identity:76.60;
kegg_pathway_id 00290; 00450; 00750; 00920; 00271; 00272; 00260;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Selenoamino acid metabolism; Vitamin B6 metabolism; Sulfur metabolism; Methionine metabolism; Cysteine metabolism; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
metacyc_pathway_id PWY-6293; HOMOCYSDEGR-PWY; PWY-5328; PWY-6292; PWY-821; PWY-801;
metacyc_pathway_name superpathway of L-cysteine biosynthesis (fungi);; L-cysteine biosynthesis III (from L-homocysteine);; superpathway of L-methionine salvage and degradation;; superpathway of L-cysteine biosynthesis (mammalian);; superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae);; homocysteine and cysteine interconversion;;
metacyc_pathway_type CYSTEINE-SYN; Super-Pathways;; CYSTEINE-SYN; HOMOCYSTEINE-DEG;; METHIONINE-DEG; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; CYSTEINE-SYN; Interconversion;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:6.5e-73 score:244.9 best_domain_score:244.7 name:PALP;
sprot_desc Putative cystathionine beta-synthase MT1108;
sprot_id sp|P9WP50|Y1077_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WP50|Y1077_MYCTO 24 337 evalue:2.7e-82 qcov:90.20 identity:49.80;
83667 83251 CDS
ID metaerg.pl|09690
allgo_ids GO:0055085;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000337.1_41 25 133 evalue:5.4e-35 qcov:79.00 identity:64.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF03544;
pfam_desc Gram-negative bacterial TonB protein C-terminal;
pfam_id TonB_C;
pfam_target db:Pfam-A.hmm|PF03544.14 evalue:2.7e-17 score:62.2 best_domain_score:61.7 name:TonB_C;
sp YES;
tigrfam_acc TIGR01352;
tigrfam_desc TonB family C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name tonB_Cterm;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01352 evalue:2.7e-17 score:62.1 best_domain_score:61.6 name:TIGR01352;
83251 83355 lipoprotein_signal_peptide
ID metaerg.pl|09691
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
84545 83664 CDS
ID metaerg.pl|09692
allgo_ids GO:0005524; GO:0006298; GO:0030983; GO:0003684;
allko_ids K03555;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000026.1_52 2 285 evalue:2.5e-122 qcov:96.90 identity:79.20;
kegg_pathway_id 03430;
kegg_pathway_name Mismatch repair;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.33944; 0.0210202; 11.7082; 0.242929; 13.3116;
pfam_acc PF00488;
pfam_desc MutS domain V;
pfam_id MutS_V;
pfam_target db:Pfam-A.hmm|PF00488.21 evalue:3.6e-83 score:277.4 best_domain_score:277.1 name:MutS_V;
sprot_desc DNA mismatch repair protein MutS;
sprot_id sp|C6DZZ3|MUTS_GEOSM;
sprot_target db:uniprot_sprot|sp|C6DZZ3|MUTS_GEOSM 3 279 evalue:1.2e-83 qcov:94.50 identity:59.40;
>Feature NODE_69_length_84455_cov_14.1722
2 232 CDS
ID metaerg.pl|09693
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665348.1 1 74 evalue:8.6e-27 qcov:97.40 identity:73.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
2515 1235 CDS
ID metaerg.pl|09694
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108668718.1 13 426 evalue:5.6e-59 qcov:97.20 identity:38.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF01610; PF14690;
pfam_desc Transposase; zinc-finger of transposase IS204/IS1001/IS1096/IS1165;
pfam_id DDE_Tnp_ISL3; zf-ISL3;
pfam_target db:Pfam-A.hmm|PF01610.17 evalue:1e-50 score:172.0 best_domain_score:171.6 name:DDE_Tnp_ISL3; db:Pfam-A.hmm|PF14690.6 evalue:7.9e-07 score:28.9 best_domain_score:27.7 name:zf-ISL3;
5706 2599 CDS
ID metaerg.pl|09695
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
sp YES;
2599 2703 signal_peptide
ID metaerg.pl|09696
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
7867 6560 CDS
ID metaerg.pl|09697
allgo_ids GO:0003677; GO:0004803; GO:0006313;
allko_ids K07493;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108664337.1 18 427 evalue:2.8e-186 qcov:94.30 identity:76.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00872;
pfam_desc Transposase, Mutator family;
pfam_id Transposase_mut;
pfam_target db:Pfam-A.hmm|PF00872.18 evalue:4.9e-113 score:377.1 best_domain_score:376.7 name:Transposase_mut;
sprot_desc Transposase for insertion sequence element ISRM3;
sprot_id sp|P80011|TRA3_RHIME;
sprot_target db:uniprot_sprot|sp|P80011|TRA3_RHIME 23 425 evalue:6.6e-102 qcov:92.60 identity:44.80;
8070 8498 CDS
ID metaerg.pl|09698
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium shinjukuense;
genomedb_acc GCF_002086755.1;
genomedb_target db:genomedb|GCF_002086755.1|WP_083052700.1 3 139 evalue:5.3e-30 qcov:96.50 identity:60.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
8495 9505 CDS
ID metaerg.pl|09699
allgo_ids GO:0015074;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides_A;s__Nocardioides_A massiliensis;
genomedb_acc GCA_900067705.1;
genomedb_target db:genomedb|GCA_900067705.1|CCXJ01000641.1_4 1 336 evalue:4.5e-120 qcov:100.00 identity:64.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00665; PF13683;
pfam_desc Integrase core domain; Integrase core domain;
pfam_id rve; rve_3;
pfam_target db:Pfam-A.hmm|PF00665.26 evalue:7.6e-22 score:77.0 best_domain_score:76.3 name:rve; db:Pfam-A.hmm|PF13683.6 evalue:6e-11 score:41.2 best_domain_score:40.1 name:rve_3;
9978 10475 CDS
ID metaerg.pl|09700
allgo_ids GO:0046872; GO:0008237;
allko_ids K03630;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665125.1 9 165 evalue:1.2e-57 qcov:95.20 identity:73.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF04002;
pfam_desc RadC-like JAB domain;
pfam_id RadC;
pfam_target db:Pfam-A.hmm|PF04002.15 evalue:1.4e-37 score:127.6 best_domain_score:127.3 name:RadC;
sprot_desc hypothetical protein;
sprot_id sp|A4J7K6|Y2549_DESRM;
sprot_target db:uniprot_sprot|sp|A4J7K6|Y2549_DESRM 31 165 evalue:1.1e-25 qcov:81.80 identity:40.00;
14128 13370 CDS
ID metaerg.pl|09701
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
15228 15449 CDS
ID metaerg.pl|09702
allgo_ids GO:0003700; GO:0006352; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces_B;s__Streptomyces_B paucisporeus;
genomedb_acc GCF_900142575.1;
genomedb_target db:genomedb|GCF_900142575.1|WP_073501698.1 1 69 evalue:1.6e-06 qcov:94.50 identity:47.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF04545; PF08281;
pfam_desc Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF04545.16 evalue:2.3e-11 score:42.2 best_domain_score:41.8 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:6.3e-13 score:47.4 best_domain_score:46.8 name:Sigma70_r4_2;
15439 16830 CDS
ID metaerg.pl|09703
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
sp YES;
tm_num 1;
15439 15618 signal_peptide
ID metaerg.pl|09704
Note TAT;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
15439 16830 transmembrane_helix
ID metaerg.pl|09705
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i15550-15618o;
18538 17792 CDS
ID metaerg.pl|09706
allko_ids K01181; K01448; K01225; K01179; K01183;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA5794;g__UBA5794;s__UBA5794 sp002418265;
genomedb_acc GCA_002418265.1;
genomedb_target db:genomedb|GCA_002418265.1|DIDS01000014.1_132 73 247 evalue:3.2e-46 qcov:70.60 identity:55.70;
kegg_pathway_id 00530; 00500; 00550;
kegg_pathway_name Aminosugars metabolism; Starch and sucrose metabolism; Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00395;
pfam_desc S-layer homology domain;
pfam_id SLH;
pfam_target db:Pfam-A.hmm|PF00395.20 evalue:4.6e-13 score:48.2 best_domain_score:16.2 name:SLH;
sp YES;
tm_num 1;
17792 17872 signal_peptide
ID metaerg.pl|09707
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
18538 17792 transmembrane_helix
ID metaerg.pl|09708
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i17810-17869o;
19029 19346 CDS
ID metaerg.pl|09709
allgo_ids GO:0003677; GO:0004803; GO:0006313;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Haloechinothrix;s__Haloechinothrix alba;
genomedb_acc GCF_900188115.1;
genomedb_target db:genomedb|GCF_900188115.1|WP_089300810.1 1 75 evalue:4.2e-16 qcov:71.40 identity:58.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF01527;
pfam_desc Transposase;
pfam_id HTH_Tnp_1;
pfam_target db:Pfam-A.hmm|PF01527.20 evalue:1.2e-10 score:40.8 best_domain_score:40.3 name:HTH_Tnp_1;
19856 21289 CDS
ID metaerg.pl|09710
allec_ids 2.7.7.49;
casgene_acc pfam00078_RT_CAS-I:CAS-III;
casgene_name RT;
casgene_target db:casgenes.hmm|pfam00078_RT_CAS-I:CAS-III evalue:1.3e-46 score:158.1 best_domain_score:157.4 name:RT;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__Thermoanaerobaculales;f__Thermoanaerobaculaceae;g__RBG-13-68-16;s__RBG-13-68-16 sp003158745;
genomedb_acc GCA_003158745.1;
genomedb_target db:genomedb|GCA_003158745.1|PMLC01000006.1_2 1 469 evalue:8.5e-181 qcov:98.30 identity:67.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF08388; PF00078;
pfam_desc Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase);
pfam_id GIIM; RVT_1;
pfam_target db:Pfam-A.hmm|PF08388.11 evalue:1.8e-18 score:65.6 best_domain_score:64.7 name:GIIM; db:Pfam-A.hmm|PF00078.27 evalue:4.3e-37 score:127.0 best_domain_score:126.4 name:RVT_1;
sprot_desc hypothetical protein;
sprot_id sp|Q47688|YKFC_ECOLI;
sprot_target db:uniprot_sprot|sp|Q47688|YKFC_ECOLI 20 356 evalue:1.7e-55 qcov:70.60 identity:38.50;
tigrfam_acc TIGR04416;
tigrfam_desc group II intron reverse transcriptase/maturase;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name group_II_RT_mat;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04416 evalue:1.5e-112 score:375.4 best_domain_score:375.2 name:TIGR04416;
21414 22133 CDS
ID metaerg.pl|09711
allgo_ids GO:0015074; GO:0003677; GO:0006310; GO:0032196;
allko_ids K07497;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__Bog-756;s__Bog-756 sp003138855;
genomedb_acc GCA_003138855.1;
genomedb_target db:genomedb|GCA_003138855.1|PLHF01000080.1_1 2 201 evalue:3.6e-47 qcov:83.70 identity:53.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF13276; PF00665;
pfam_desc HTH-like domain; Integrase core domain;
pfam_id HTH_21; rve;
pfam_target db:Pfam-A.hmm|PF13276.6 evalue:1.6e-16 score:59.4 best_domain_score:58.7 name:HTH_21; db:Pfam-A.hmm|PF00665.26 evalue:9.1e-15 score:54.1 best_domain_score:53.0 name:rve;
sprot_desc Transposase InsF for insertion sequence IS3A;
sprot_id sp|P0CF79|INSF1_ECOLI;
sprot_target db:uniprot_sprot|sp|P0CF79|INSF1_ECOLI 1 200 evalue:8.8e-24 qcov:83.70 identity:36.00;
22719 22279 CDS
ID metaerg.pl|09712
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
sp YES;
22279 22320 lipoprotein_signal_peptide
ID metaerg.pl|09713
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
24633 23728 CDS
ID metaerg.pl|09714
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Arthrobacter_G;s__Arthrobacter_G sp001766675;
genomedb_acc GCF_001766675.1;
genomedb_target db:genomedb|GCF_001766675.1|WP_070349063.1 2 301 evalue:1.7e-102 qcov:99.70 identity:61.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
25313 24633 CDS
ID metaerg.pl|09715
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__UBA11606;g__SZUA-87;s__SZUA-87 sp003231645;
genomedb_acc GCA_003231645.1;
genomedb_target db:genomedb|GCA_003231645.1|QIIW01000033.1_4 1 204 evalue:4.6e-52 qcov:90.30 identity:48.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF18153;
pfam_desc SMODS-associating 2TM, beta-strand rich effector domain;
pfam_id S_2TMBeta;
pfam_target db:Pfam-A.hmm|PF18153.1 evalue:2.5e-20 score:72.3 best_domain_score:71.8 name:S_2TMBeta;
tm_num 2;
25313 24633 transmembrane_helix
ID metaerg.pl|09716
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i24651-24710o24738-24797i;
25597 25310 CDS
ID metaerg.pl|09717
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__UBA11606;g__SZUA-87;s__SZUA-87 sp003231645;
genomedb_acc GCA_003231645.1;
genomedb_target db:genomedb|GCA_003231645.1|QIIW01000033.1_5 9 95 evalue:1.2e-09 qcov:91.60 identity:39.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
27372 25945 CDS
ID metaerg.pl|09718
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus;s__Rhodococcus sp002259335;
genomedb_acc GCF_002259335.1;
genomedb_target db:genomedb|GCF_002259335.1|WP_094739131.1 3 447 evalue:4.1e-26 qcov:93.70 identity:29.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
28793 28368 CDS
ID metaerg.pl|09719
allgo_ids GO:0016787; GO:0046872;
allko_ids K01515; K08310; K00952; K01529; K13522; K03574; K03575;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Kitasatospora;s__Kitasatospora azatica;
genomedb_acc GCF_000744785.1;
genomedb_target db:genomedb|GCF_000744785.1|WP_083977605.1 3 141 evalue:5.5e-43 qcov:98.60 identity:62.60;
kegg_pathway_id 00790; 00230; 03410; 00760;
kegg_pathway_name Folate biosynthesis; Purine metabolism; Base excision repair; Nicotinate and nicotinamide metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:2.7e-17 score:62.3 best_domain_score:62.1 name:NUDIX;
sprot_desc MutT-like protein;
sprot_id sp|P32091|MUTT_STRAM;
sprot_target db:uniprot_sprot|sp|P32091|MUTT_STRAM 3 136 evalue:1.9e-34 qcov:95.00 identity:56.00;
28857 29630 CDS
ID metaerg.pl|09720
allgo_ids GO:0003700; GO:0006355;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Frankiales;f__Frankiaceae;g__Frankia;s__Frankia sp001854805;
genomedb_acc GCF_001854805.1;
genomedb_target db:genomedb|GCF_001854805.1|WP_071050768.1 5 256 evalue:7.5e-83 qcov:98.10 identity:58.30;
kegg_pathway_id 00300; 00310;
kegg_pathway_name Lysine biosynthesis; Lysine degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00392; PF07702;
pfam_desc Bacterial regulatory proteins, gntR family; UTRA domain;
pfam_id GntR; UTRA;
pfam_target db:Pfam-A.hmm|PF00392.21 evalue:6e-20 score:69.9 best_domain_score:69.0 name:GntR; db:Pfam-A.hmm|PF07702.13 evalue:5.4e-34 score:116.3 best_domain_score:115.7 name:UTRA;
30068 31354 CDS
ID metaerg.pl|09721
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0075713; GO:0046718; GO:0044826;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665157.1 1 419 evalue:4.2e-78 qcov:97.90 identity:43.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF14657; PF00589;
pfam_desc Arm DNA-binding domain; Phage integrase family;
pfam_id Arm-DNA-bind_4; Phage_integrase;
pfam_target db:Pfam-A.hmm|PF14657.6 evalue:3.8e-06 score:25.8 best_domain_score:25.0 name:Arm-DNA-bind_4; db:Pfam-A.hmm|PF00589.22 evalue:1.8e-21 score:75.9 best_domain_score:74.9 name:Phage_integrase;
sprot_desc Integrase;
sprot_id sp|P22877|INTR_SACER;
sprot_target db:uniprot_sprot|sp|P22877|INTR_SACER 30 403 evalue:5.1e-14 qcov:87.40 identity:23.00;
31578 31489 tRNA
ID metaerg.pl|09722
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
name tRNA_Ser_cga;
32078 31647 CDS
ID metaerg.pl|09723
allec_ids 3.5.4.33;
allgo_ids GO:0002100; GO:0008251; GO:0052717; GO:0008270;
allko_ids K01485; K11991;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664854.1 4 142 evalue:6.5e-52 qcov:97.20 identity:77.00;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00383; PF14437;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase;
pfam_id dCMP_cyt_deam_1; MafB19-deam;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:3.6e-26 score:90.2 best_domain_score:89.9 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:1.2e-32 score:111.8 best_domain_score:111.7 name:MafB19-deam;
sprot_desc tRNA-specific adenosine deaminase;
sprot_id sp|Q99W51|TADA_STAAM;
sprot_target db:uniprot_sprot|sp|Q99W51|TADA_STAAM 1 138 evalue:4.0e-32 qcov:96.50 identity:50.70;
32248 32529 CDS
ID metaerg.pl|09724
allgo_ids GO:0003677; GO:0006355; GO:0046872; GO:0005737; GO:0032993; GO:0001217; GO:0000976; GO:0045892; GO:0046688;
allko_ids K21600;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Kutzneria;s__Kutzneria sp000568255;
genomedb_acc GCF_000568255.1;
genomedb_target db:genomedb|GCF_000568255.1|WP_043717325.1 1 93 evalue:1.4e-26 qcov:100.00 identity:67.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF02583;
pfam_desc Metal-sensitive transcriptional repressor;
pfam_id Trns_repr_metal;
pfam_target db:Pfam-A.hmm|PF02583.17 evalue:3.6e-31 score:106.6 best_domain_score:106.4 name:Trns_repr_metal;
sprot_desc Copper-sensing transcriptional repressor RicR;
sprot_id sp|O07434|RICR_MYCTU;
sprot_target db:uniprot_sprot|sp|O07434|RICR_MYCTU 2 93 evalue:3.8e-23 qcov:98.90 identity:57.60;
32582 32788 CDS
ID metaerg.pl|09725
allgo_ids GO:0030001; GO:0046872;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__UBA11606;g__SZUA-87;s__SZUA-87 sp003231645;
genomedb_acc GCA_003231645.1;
genomedb_target db:genomedb|GCA_003231645.1|QIIW01000081.1_27 6 68 evalue:2.0e-11 qcov:92.60 identity:60.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00403;
pfam_desc Heavy-metal-associated domain;
pfam_id HMA;
pfam_target db:Pfam-A.hmm|PF00403.26 evalue:1.4e-14 score:53.6 best_domain_score:53.4 name:HMA;
33248 32835 CDS
ID metaerg.pl|09726
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668252.1 2 133 evalue:2.3e-14 qcov:96.40 identity:41.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
33465 34421 CDS
ID metaerg.pl|09727
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664856.1 37 318 evalue:2.5e-72 qcov:88.70 identity:50.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
34510 36090 CDS
ID metaerg.pl|09728
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441200.1 1 488 evalue:2.9e-182 qcov:92.80 identity:69.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF13245; PF13604; PF00580;
pfam_desc AAA domain; AAA domain; UvrD/REP helicase N-terminal domain;
pfam_id AAA_19; AAA_30; UvrD-helicase;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:2.7e-30 score:104.9 best_domain_score:104.3 name:AAA_19; db:Pfam-A.hmm|PF13604.6 evalue:1.5e-09 score:37.1 best_domain_score:25.0 name:AAA_30; db:Pfam-A.hmm|PF00580.21 evalue:8.9e-32 score:110.1 best_domain_score:64.3 name:UvrD-helicase;
36087 37544 CDS
ID metaerg.pl|09729
allgo_ids GO:0003676; GO:0005622;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664868.1 10 484 evalue:1.2e-150 qcov:97.90 identity:61.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00570; PF13361; PF13538;
pfam_desc HRDC domain; UvrD-like helicase C-terminal domain; UvrD-like helicase C-terminal domain;
pfam_id HRDC; UvrD_C; UvrD_C_2;
pfam_target db:Pfam-A.hmm|PF00570.23 evalue:2e-21 score:75.0 best_domain_score:73.9 name:HRDC; db:Pfam-A.hmm|PF13361.6 evalue:7e-17 score:61.0 best_domain_score:49.5 name:UvrD_C; db:Pfam-A.hmm|PF13538.6 evalue:3e-10 score:39.0 best_domain_score:38.0 name:UvrD_C_2;
39306 37672 CDS
ID metaerg.pl|09730
allgo_ids GO:0003676; GO:0005524; GO:0003677; GO:0016787;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664869.1 2 544 evalue:3.2e-240 qcov:99.80 identity:76.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00270; PF04851;
pfam_desc DEAD/DEAH box helicase; Type III restriction enzyme, res subunit;
pfam_id DEAD; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:2e-07 score:30.2 best_domain_score:28.1 name:DEAD; db:Pfam-A.hmm|PF04851.15 evalue:3e-15 score:55.9 best_domain_score:55.2 name:ResIII;
sprot_desc hypothetical protein;
sprot_id sp|P9WL20|Y2917_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WL20|Y2917_MYCTO 7 534 evalue:1.8e-93 qcov:97.10 identity:40.90;
39784 40992 CDS
ID metaerg.pl|09731
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664871.1 10 402 evalue:3.7e-68 qcov:97.80 identity:43.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF06245;
pfam_desc Protein of unknown function (DUF1015);
pfam_id DUF1015;
pfam_target db:Pfam-A.hmm|PF06245.11 evalue:8.8e-42 score:142.6 best_domain_score:142.3 name:DUF1015;
41065 41562 CDS
ID metaerg.pl|09732
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0003677; GO:0046872;
allko_ids K03711;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441202.1 5 139 evalue:2.3e-45 qcov:81.80 identity:64.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF01475;
pfam_desc Ferric uptake regulator family;
pfam_id FUR;
pfam_target db:Pfam-A.hmm|PF01475.19 evalue:2.2e-22 score:78.7 best_domain_score:78.4 name:FUR;
sprot_desc Ferric uptake regulation protein;
sprot_id sp|P71333|FUR_HAEDU;
sprot_target db:uniprot_sprot|sp|P71333|FUR_HAEDU 7 136 evalue:2.7e-08 qcov:78.80 identity:27.10;
41559 42212 CDS
ID metaerg.pl|09733
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Leptolyngbyales;f__Leptolyngbyaceae;g__ULC077BIN1;s__ULC077BIN1 sp003249025;
genomedb_acc GCA_003249025.1;
genomedb_target db:genomedb|GCA_003249025.1|PZV08992.1 37 213 evalue:1.6e-33 qcov:81.60 identity:42.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF03992;
pfam_desc Antibiotic biosynthesis monooxygenase;
pfam_id ABM;
pfam_target db:Pfam-A.hmm|PF03992.16 evalue:3.7e-06 score:26.2 best_domain_score:25.6 name:ABM;
44379 42343 CDS
ID metaerg.pl|09734
allgo_ids GO:0006812; GO:0015299; GO:0016021; GO:0055085; GO:0006814;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108664356.1 1 638 evalue:6.0e-164 qcov:94.10 identity:53.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00999; PF00582;
pfam_desc Sodium/hydrogen exchanger family; Universal stress protein family;
pfam_id Na_H_Exchanger; Usp;
pfam_target db:Pfam-A.hmm|PF00999.21 evalue:1.6e-46 score:158.1 best_domain_score:157.6 name:Na_H_Exchanger; db:Pfam-A.hmm|PF00582.26 evalue:7.6e-10 score:38.7 best_domain_score:35.0 name:Usp;
sprot_desc Na(+)/H(+) antiporter NhaS5;
sprot_id sp|Q55736|NHAS5_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55736|NHAS5_SYNY3 5 526 evalue:2.8e-67 qcov:77.00 identity:34.20;
tm_num 12;
44379 42343 transmembrane_helix
ID metaerg.pl|09735
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology o42385-42444i42457-42510o42520-42588i42625-42693o42703-42762i42796-42864o42892-42951i43012-43080o43153-43221i43240-43308o43351-43419i43432-43500o;
46403 44457 CDS
ID metaerg.pl|09736
allgo_ids GO:0006812; GO:0015299; GO:0016021; GO:0055085; GO:0006814;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664873.1 1 647 evalue:1.6e-198 qcov:99.80 identity:61.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00999; PF00582;
pfam_desc Sodium/hydrogen exchanger family; Universal stress protein family;
pfam_id Na_H_Exchanger; Usp;
pfam_target db:Pfam-A.hmm|PF00999.21 evalue:7.4e-39 score:132.8 best_domain_score:132.4 name:Na_H_Exchanger; db:Pfam-A.hmm|PF00582.26 evalue:3.7e-11 score:43.0 best_domain_score:43.0 name:Usp;
sprot_desc Na(+)/H(+) antiporter NhaS5;
sprot_id sp|Q55736|NHAS5_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55736|NHAS5_SYNY3 9 526 evalue:1.8e-55 qcov:79.90 identity:31.50;
tm_num 8;
46403 44457 transmembrane_helix
ID metaerg.pl|09737
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology o44469-44537i44556-44624o44637-44696i44730-44798o44808-44876i44913-44981o44994-45062i45123-45191o;
47831 46470 CDS
ID metaerg.pl|09738
allgo_ids GO:0016021; GO:0055085;
allko_ids K08219; K08177;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669950.1 42 431 evalue:1.1e-137 qcov:86.10 identity:70.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:1.2e-18 score:66.4 best_domain_score:50.7 name:MFS_1;
tm_num 11;
47831 46470 transmembrane_helix
ID metaerg.pl|09739
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i46563-46631o46674-46733i46770-46838o46848-46916i46935-47003o47031-47099i47229-47297o47334-47402i47463-47531o47589-47657i47694-47762o;
49384 47828 CDS
ID metaerg.pl|09740
allgo_ids GO:0003924; GO:0005525; GO:0005737; GO:0016149; GO:0006449;
allko_ids K00955; K00956; K00860; K02837;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664876.1 1 517 evalue:1.3e-235 qcov:99.80 identity:79.50;
kegg_pathway_id 00230; 00450; 00920;
kegg_pathway_name Purine metabolism; Selenoamino acid metabolism; Sulfur metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00009; PF03144; PF01926; PF16658;
pfam_desc Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; 50S ribosome-binding GTPase; Class II release factor RF3, C-terminal domain;
pfam_id GTP_EFTU; GTP_EFTU_D2; MMR_HSR1; RF3_C;
pfam_target db:Pfam-A.hmm|PF00009.27 evalue:2.6e-51 score:173.2 best_domain_score:172.8 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:9.7e-08 score:31.5 best_domain_score:30.6 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF01926.23 evalue:2.1e-06 score:27.0 best_domain_score:25.0 name:MMR_HSR1; db:Pfam-A.hmm|PF16658.5 evalue:6.8e-34 score:115.7 best_domain_score:115.1 name:RF3_C;
sprot_desc Peptide chain release factor 3;
sprot_id sp|Q31KM4|RF3_SYNE7;
sprot_target db:uniprot_sprot|sp|Q31KM4|RF3_SYNE7 10 512 evalue:2.4e-127 qcov:97.10 identity:47.50;
tigrfam_acc TIGR00231; TIGR00503;
tigrfam_desc small GTP-binding protein domain; peptide chain release factor 3;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; prfC;
tigrfam_sub1role General; Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:1.7e-23 score:82.3 best_domain_score:81.2 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00503 evalue:9.1e-163 score:541.6 best_domain_score:541.2 name:TIGR00503;
50341 49586 CDS
ID metaerg.pl|09741
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441210.1 3 248 evalue:1.3e-42 qcov:98.00 identity:47.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF07987;
pfam_desc Domain of unkown function (DUF1775);
pfam_id DUF1775;
pfam_target db:Pfam-A.hmm|PF07987.11 evalue:4.6e-31 score:107.3 best_domain_score:58.5 name:DUF1775;
sp YES;
tm_num 2;
49586 49660 signal_peptide
ID metaerg.pl|09742
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
50341 49586 transmembrane_helix
ID metaerg.pl|09743
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i49604-49672o50255-50323i;
51420 50527 CDS
ID metaerg.pl|09744
allec_ids 3.6.1.27;
allgo_ids GO:0016020; GO:0016311; GO:0050380; GO:0016021; GO:0005886; GO:0071555; GO:0009252; GO:0008360; GO:0046677;
allko_ids K06153;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Haloechinothrix;s__Haloechinothrix alba;
genomedb_acc GCF_900188115.1;
genomedb_target db:genomedb|GCF_900188115.1|WP_089301420.1 1 291 evalue:2.2e-94 qcov:98.00 identity:65.50;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF02673;
pfam_desc Bacitracin resistance protein BacA;
pfam_id BacA;
pfam_target db:Pfam-A.hmm|PF02673.18 evalue:8.7e-57 score:192.0 best_domain_score:191.7 name:BacA;
sprot_desc Undecaprenyl-diphosphatase;
sprot_id sp|A1WUY5|UPPP_HALHL;
sprot_target db:uniprot_sprot|sp|A1WUY5|UPPP_HALHL 1 287 evalue:6.6e-53 qcov:96.60 identity:48.10;
tm_num 9;
51420 50527 transmembrane_helix
ID metaerg.pl|09745
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i50545-50613o50671-50730i50827-50895o50908-50967i51004-51072o51085-51138i51157-51216o51259-51327i51346-51405o;
52918 51581 CDS
ID metaerg.pl|09746
allgo_ids GO:0006812; GO:0008324; GO:0016021; GO:0005886; GO:0042802; GO:0000287; GO:0015095; GO:0042803; GO:0015693;
allko_ids K00088; K06213;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Allosalinactinospora;s__Allosalinactinospora lopnorensis;
genomedb_acc GCF_000981225.1;
genomedb_target db:genomedb|GCF_000981225.1|WP_046471097.1 6 445 evalue:1.0e-140 qcov:98.90 identity:62.30;
kegg_pathway_id 00230; 00983;
kegg_pathway_name Purine metabolism; Drug metabolism - other enzymes;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00571; PF01769; PF03448;
pfam_desc CBS domain; Divalent cation transporter; MgtE intracellular N domain;
pfam_id CBS; MgtE; MgtE_N;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:2e-15 score:56.2 best_domain_score:35.3 name:CBS; db:Pfam-A.hmm|PF01769.16 evalue:5.1e-28 score:97.2 best_domain_score:97.2 name:MgtE; db:Pfam-A.hmm|PF03448.17 evalue:4.9e-20 score:71.3 best_domain_score:71.3 name:MgtE_N;
sprot_desc Magnesium transporter MgtE;
sprot_id sp|Q5SMG8|MGTE_THET8;
sprot_target db:uniprot_sprot|sp|Q5SMG8|MGTE_THET8 105 443 evalue:1.0e-62 qcov:76.20 identity:41.60;
tigrfam_acc TIGR00400;
tigrfam_desc magnesium transporter;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name mgtE;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR00400 evalue:1.8e-121 score:405.2 best_domain_score:405.0 name:TIGR00400;
tm_num 5;
52918 51581 transmembrane_helix
ID metaerg.pl|09747
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology o52427-52486i52505-52573o52646-52714i52733-52801o52844-52912i;
53828 55303 CDS
ID metaerg.pl|09748
allgo_ids GO:0005247; GO:0006821; GO:0016020; GO:0055085; GO:0034707; GO:0005886;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Ilumatobacteraceae;g__UBA668;s__UBA668 sp003154135;
genomedb_acc GCA_003154135.1;
genomedb_target db:genomedb|GCA_003154135.1|PMCN01000077.1_13 11 450 evalue:4.7e-118 qcov:89.60 identity:56.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00654;
pfam_desc Voltage gated chloride channel;
pfam_id Voltage_CLC;
pfam_target db:Pfam-A.hmm|PF00654.20 evalue:3.4e-57 score:193.5 best_domain_score:192.4 name:Voltage_CLC;
sprot_desc Chloride/fluoride channel protein;
sprot_id sp|Q87WD2|ERIC_PSESM;
sprot_target db:uniprot_sprot|sp|Q87WD2|ERIC_PSESM 29 453 evalue:1.7e-82 qcov:86.60 identity:42.90;
tm_num 9;
53828 55303 transmembrane_helix
ID metaerg.pl|09749
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology o53933-54001i54038-54097o54389-54457i54476-54544o54602-54670i54707-54775o54839-54907i54926-55021o55064-55132i;
55735 55358 CDS
ID metaerg.pl|09750
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664880.1 1 113 evalue:7.0e-26 qcov:90.40 identity:57.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
56320 55901 CDS
ID metaerg.pl|09751
allgo_ids GO:0003677; GO:0006355; GO:0051537; GO:0046872; GO:0006979;
allko_ids K13639;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__QHCF01;g__QHCF01;s__QHCF01 sp003244275;
genomedb_acc GCA_003244275.1;
genomedb_target db:genomedb|GCA_003244275.1|PZS19339.1 19 116 evalue:5.6e-32 qcov:70.50 identity:71.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00376; PF09278; PF13411;
pfam_desc MerR family regulatory protein; MerR, DNA binding; MerR HTH family regulatory protein;
pfam_id MerR; MerR-DNA-bind; MerR_1;
pfam_target db:Pfam-A.hmm|PF00376.23 evalue:8.7e-17 score:59.9 best_domain_score:59.2 name:MerR; db:Pfam-A.hmm|PF09278.11 evalue:7.6e-15 score:54.4 best_domain_score:54.0 name:MerR-DNA-bind; db:Pfam-A.hmm|PF13411.6 evalue:1.5e-18 score:65.9 best_domain_score:65.4 name:MerR_1;
sprot_desc HTH-type transcriptional activator SoxR homolog;
sprot_id sp|Q9ZHI4|SOXR_CHRVO;
sprot_target db:uniprot_sprot|sp|Q9ZHI4|SOXR_CHRVO 19 116 evalue:4.2e-26 qcov:70.50 identity:56.10;
tigrfam_acc TIGR01950;
tigrfam_desc redox-sensitive transcriptional activator SoxR;
tigrfam_mainrole Regulatory functions;
tigrfam_name SoxR;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01950 evalue:1.2e-41 score:140.9 best_domain_score:140.7 name:TIGR01950;
57219 56446 CDS
ID metaerg.pl|09752
allgo_ids GO:0003700; GO:0006355;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668460.1 9 243 evalue:7.8e-88 qcov:91.40 identity:70.60;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00392; PF08220; PF07702;
pfam_desc Bacterial regulatory proteins, gntR family; DeoR-like helix-turn-helix domain; UTRA domain;
pfam_id GntR; HTH_DeoR; UTRA;
pfam_target db:Pfam-A.hmm|PF00392.21 evalue:3e-14 score:51.7 best_domain_score:49.8 name:GntR; db:Pfam-A.hmm|PF08220.12 evalue:7.1e-05 score:21.7 best_domain_score:20.8 name:HTH_DeoR; db:Pfam-A.hmm|PF07702.13 evalue:4e-29 score:100.5 best_domain_score:99.7 name:UTRA;
57905 57240 CDS
ID metaerg.pl|09753
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp001428125;
genomedb_acc GCF_001428125.1;
genomedb_target db:genomedb|GCF_001428125.1|WP_056604518.1 1 198 evalue:2.5e-50 qcov:89.60 identity:53.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF08241; PF13649; PF03848;
pfam_desc Methyltransferase domain; Methyltransferase domain; Tellurite resistance protein TehB;
pfam_id Methyltransf_11; Methyltransf_25; TehB;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:0.00017 score:21.4 best_domain_score:20.7 name:Methyltransf_11; db:Pfam-A.hmm|PF13649.6 evalue:9.8e-09 score:35.1 best_domain_score:34.3 name:Methyltransf_25; db:Pfam-A.hmm|PF03848.14 evalue:9.8e-05 score:21.1 best_domain_score:20.6 name:TehB;
59366 57975 CDS
ID metaerg.pl|09754
allko_ids K04564; K01007; K01011; K01069; K01180; K01738; K02439;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668461.1 3 459 evalue:4.9e-165 qcov:98.70 identity:63.50;
kegg_pathway_id 00450; 00920; 00620; 00720; 00272;
kegg_pathway_name Selenoamino acid metabolism; Sulfur metabolism; Pyruvate metabolism; Reductive carboxylate cycle (CO2 fixation); Cysteine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00753; PF00581;
pfam_desc Metallo-beta-lactamase superfamily; Rhodanese-like domain;
pfam_id Lactamase_B; Rhodanese;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:6.7e-11 score:41.8 best_domain_score:40.4 name:Lactamase_B; db:Pfam-A.hmm|PF00581.20 evalue:9.2e-12 score:44.7 best_domain_score:28.3 name:Rhodanese;
61255 59354 CDS
ID metaerg.pl|09755
allgo_ids GO:0008272; GO:0015116; GO:0016021; GO:0031969; GO:0005887; GO:0015301; GO:0008271; GO:0015293;
allko_ids K18059;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora phaseoli;
genomedb_acc GCF_900109115.1;
genomedb_target db:genomedb|GCF_900109115.1|WP_092377009.1 6 576 evalue:4.0e-117 qcov:90.20 identity:49.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF01740; PF13466; PF00916;
pfam_desc STAS domain; STAS domain; Sulfate permease family;
pfam_id STAS; STAS_2; Sulfate_transp;
pfam_target db:Pfam-A.hmm|PF01740.21 evalue:9e-09 score:34.2 best_domain_score:33.6 name:STAS; db:Pfam-A.hmm|PF13466.6 evalue:2.3e-07 score:30.3 best_domain_score:28.5 name:STAS_2; db:Pfam-A.hmm|PF00916.20 evalue:2.4e-103 score:345.1 best_domain_score:344.8 name:Sulfate_transp;
sprot_desc Sulfate transporter 4.1, chloroplastic;
sprot_id sp|Q9FY46|SUT41_ARATH;
sprot_target db:uniprot_sprot|sp|Q9FY46|SUT41_ARATH 27 544 evalue:1.3e-61 qcov:81.80 identity:32.40;
tigrfam_acc TIGR00815;
tigrfam_desc sulfate permease;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name sulP;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00815 evalue:2.2e-115 score:385.4 best_domain_score:381.5 name:TIGR00815;
tm_num 9;
61255 59354 transmembrane_helix
ID metaerg.pl|09756
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i59612-59680o59723-59791i59810-59878o59945-60013i60050-60118o60176-60244i60407-60475o60485-60538i60575-60643o;
61883 61341 CDS
ID metaerg.pl|09757
allko_ids K01738; K01069; K02439; K01802; K04564; K01011; K01007;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora parva;
genomedb_acc GCF_000718515.1;
genomedb_target db:genomedb|GCF_000718515.1|WP_030337681.1 2 173 evalue:3.3e-45 qcov:95.60 identity:57.70;
kegg_pathway_id 00272; 00620; 00720; 00450; 00920;
kegg_pathway_name Cysteine metabolism; Pyruvate metabolism; Reductive carboxylate cycle (CO2 fixation); Selenoamino acid metabolism; Sulfur metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF11127; PF00581;
pfam_desc Protein of unknown function (DUF2892); Rhodanese-like domain;
pfam_id DUF2892; Rhodanese;
pfam_target db:Pfam-A.hmm|PF11127.8 evalue:8e-09 score:34.7 best_domain_score:34.0 name:DUF2892; db:Pfam-A.hmm|PF00581.20 evalue:6e-13 score:48.5 best_domain_score:47.8 name:Rhodanese;
tm_num 2;
61883 61341 transmembrane_helix
ID metaerg.pl|09758
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i61701-61769o61779-61847i;
62836 62063 CDS
ID metaerg.pl|09759
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp003519485;
genomedb_acc GCA_003519485.1;
genomedb_target db:genomedb|GCA_003519485.1|HCA86539.1 4 201 evalue:3.9e-47 qcov:77.00 identity:54.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
63702 63064 CDS
ID metaerg.pl|09760
allgo_ids GO:0006812; GO:0008324; GO:0016021; GO:0055085;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441977.1 12 211 evalue:2.6e-89 qcov:94.30 identity:86.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF01545;
pfam_desc Cation efflux family;
pfam_id Cation_efflux;
pfam_target db:Pfam-A.hmm|PF01545.21 evalue:1.3e-07 score:30.7 best_domain_score:27.5 name:Cation_efflux;
tm_num 5;
63702 63064 transmembrane_helix
ID metaerg.pl|09761
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i63121-63189o63202-63261i63322-63390o63403-63471i63532-63600o;
64944 63943 CDS
ID metaerg.pl|09762
allec_ids 2.1.1.-;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0008173; GO:0006364;
allko_ids K06941;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Kaistiaceae;g__Kaistia;s__Kaistia adipata;
genomedb_acc GCF_000423225.1;
genomedb_target db:genomedb|GCF_000423225.1|WP_051231115.1 2 330 evalue:4.0e-92 qcov:98.80 identity:57.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
metacyc_pathway_id PWY-6292; PWY-5479; PWY-5987; PWY-6146; PWY-6427; PWY-6395; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-5773; PWY-6519; METHIONINE-DEG1-PWY; PWY-5328; CO2FORM-PWY; PWY-5116; PWY-1581; PWY-6142; PWY-6154; PWY-6424; UBISYN-PWY; PWY-5856; METH-ACETATE-PWY; PWY-5857; PWY-6303; PWY-5209; PWY-5855; PWY-6151; PWY-1422; PWY-6113; PWY-5729; PWYG-321; PWY-5305; PWY-5864; PWY-5975; PWY-5876; PWY-1061; PWY-6153; ALL-CHORISMATE-PWY; PWY-3542; PWY-4021; PWY-5041; PWY-6575; PWY-6442; CODH-PWY; PWY-5467; PWY-6477;
metacyc_pathway_name superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; xanthohumol biosynthesis;; biotin biosynthesis I;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; autoinducer AI-2 biosynthesis II (Vibrio);; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ubiquinol-9 biosynthesis (prokaryotic);; methanogenesis from acetate;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; S-adenosyl-L-methionine cycle I;; vitamin E biosynthesis (tocopherols);; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; mycolate biosynthesis;; bixin biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; magnoflorine biosynthesis;; homogalacturonan biosynthesis;; autoinducer AI-2 biosynthesis I;; superpathway of chorismate metabolism;; choline biosynthesis II;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; gramine biosynthesis;; gibberellin inactivation II (methylation);;
metacyc_pathway_type CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Autoinducer-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis;; APOCAROTENOID-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; Autoinducer-Biosynthesis;; Super-Pathways;; Choline-Biosynthesis;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Autotrophic-CO2-Fixation;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;;
pfam_acc PF04055;
pfam_desc Radical SAM superfamily;
pfam_id Radical_SAM;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:1.4e-18 score:67.1 best_domain_score:66.5 name:Radical_SAM;
sprot_desc Probable RNA methyltransferase RPD_2859;
sprot_id sp|Q136A2|Y2859_RHOPS;
sprot_target db:uniprot_sprot|sp|Q136A2|Y2859_RHOPS 27 330 evalue:2.8e-92 qcov:91.30 identity:58.90;
65868 65317 CDS
ID metaerg.pl|09763
allgo_ids GO:0008703; GO:0009231; GO:0055114; GO:0016021;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665560.1 1 181 evalue:8.0e-79 qcov:98.90 identity:77.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF01872;
pfam_desc RibD C-terminal domain;
pfam_id RibD_C;
pfam_target db:Pfam-A.hmm|PF01872.17 evalue:2.5e-15 score:56.1 best_domain_score:48.3 name:RibD_C;
sprot_desc hypothetical protein;
sprot_id sp|P45862|YWJB_BACSU;
sprot_target db:uniprot_sprot|sp|P45862|YWJB_BACSU 4 147 evalue:7.0e-13 qcov:78.70 identity:31.00;
66797 65865 CDS
ID metaerg.pl|09764
allgo_ids GO:0003700; GO:0006355; GO:0043565;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665562.1 1 309 evalue:2.0e-130 qcov:99.70 identity:74.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF12867; PF12833; PF00165;
pfam_desc DinB superfamily; Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id DinB_2; HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF12867.7 evalue:2.3e-11 score:43.5 best_domain_score:43.5 name:DinB_2; db:Pfam-A.hmm|PF12833.7 evalue:2.4e-16 score:59.0 best_domain_score:58.3 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:9.4e-07 score:28.0 best_domain_score:13.3 name:HTH_AraC;
66988 68316 CDS
ID metaerg.pl|09765
allgo_ids GO:0000155; GO:0000160; GO:0016021; GO:0046983;
allko_ids K08282; K07704; K02484; K07642; K11623; K07778; K07683; K07673; K07641; K07646; K03407; K07682; K07777; K07654; K07675; K07680; K11617; K04757; K02486; K06379; K07636; K07653; K02480; K08801; K01768; K07674;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665218.1 1 433 evalue:6.6e-119 qcov:98.00 identity:57.70;
kegg_pathway_id 00230; 02020;
kegg_pathway_name Purine metabolism; Two-component system - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF02518; PF07730; PF13796;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase; Putative sensor;
pfam_id HATPase_c; HisKA_3; Sensor;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.7e-06 score:27.7 best_domain_score:23.2 name:HATPase_c; db:Pfam-A.hmm|PF07730.13 evalue:5.6e-17 score:61.3 best_domain_score:61.3 name:HisKA_3; db:Pfam-A.hmm|PF13796.6 evalue:1.1e-21 score:76.8 best_domain_score:75.8 name:Sensor;
tm_num 4;
66988 68316 transmembrane_helix
ID metaerg.pl|09766
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i67084-67152o67162-67230i67372-67440o67483-67551i;
68313 68960 CDS
ID metaerg.pl|09767
allgo_ids GO:0006355; GO:0005737; GO:0003677; GO:0000160;
allko_ids K07641; K07646; K07654; K03407; K07642; K07653; K07636; K04757; K07644; K07696;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665217.1 3 215 evalue:4.7e-78 qcov:99.10 identity:75.70;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00196; PF00072;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain;
pfam_id GerE; Response_reg;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:1.7e-13 score:49.1 best_domain_score:48.3 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:5.7e-16 score:57.9 best_domain_score:57.2 name:Response_reg;
sprot_desc Oxygen regulatory protein NreC;
sprot_id sp|Q7WZY4|NREC_STACT;
sprot_target db:uniprot_sprot|sp|Q7WZY4|NREC_STACT 3 201 evalue:2.0e-19 qcov:92.60 identity:31.40;
68963 69964 CDS
ID metaerg.pl|09768
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665216.1 1 331 evalue:4.3e-62 qcov:99.40 identity:44.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF13349;
pfam_desc Putative adhesin;
pfam_id DUF4097;
pfam_target db:Pfam-A.hmm|PF13349.6 evalue:1.3e-11 score:43.6 best_domain_score:43.2 name:DUF4097;
tm_num 1;
68963 69964 transmembrane_helix
ID metaerg.pl|09769
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i69047-69106o;
71364 70027 CDS
ID metaerg.pl|09770
allgo_ids GO:0006353;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441436.1 1 333 evalue:1.5e-126 qcov:74.80 identity:72.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF07498; PF05552;
pfam_desc Rho termination factor, N-terminal domain; Conserved TM helix;
pfam_id Rho_N; TM_helix;
pfam_target db:Pfam-A.hmm|PF07498.12 evalue:1.4e-16 score:59.3 best_domain_score:21.0 name:Rho_N; db:Pfam-A.hmm|PF05552.12 evalue:4.7e-23 score:80.1 best_domain_score:61.2 name:TM_helix;
tm_num 5;
71364 70027 transmembrane_helix
ID metaerg.pl|09771
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology o70069-70137i70270-70329o70357-70425i70462-70530o70567-70635i;
72842 71700 CDS
ID metaerg.pl|09772
allgo_ids GO:0004040;
allko_ids K01447; K01181; K01448; K01225; K01179; K01446; K01183;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664277.1 8 376 evalue:9.4e-98 qcov:97.10 identity:52.90;
kegg_pathway_id 00550; 00530; 00500;
kegg_pathway_name Peptidoglycan biosynthesis; Aminosugars metabolism; Starch and sucrose metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF01832; PF00395;
pfam_desc Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; S-layer homology domain;
pfam_id Glucosaminidase; SLH;
pfam_target db:Pfam-A.hmm|PF01832.20 evalue:1.3e-13 score:50.5 best_domain_score:49.9 name:Glucosaminidase; db:Pfam-A.hmm|PF00395.20 evalue:5.2e-30 score:102.4 best_domain_score:44.5 name:SLH;
sp YES;
tm_num 1;
71700 71783 signal_peptide
ID metaerg.pl|09773
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
72842 71700 transmembrane_helix
ID metaerg.pl|09774
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i71718-71786o;
75632 73101 CDS
ID metaerg.pl|09775
allgo_ids GO:0004181; GO:0006508; GO:0008270;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Haloactinopolyspora;s__Haloactinopolyspora alba;
genomedb_acc GCF_003014555.1;
genomedb_target db:genomedb|GCF_003014555.1|WP_106536333.1 1 842 evalue:0.0e+00 qcov:99.90 identity:64.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00246;
pfam_desc Zinc carboxypeptidase;
pfam_id Peptidase_M14;
pfam_target db:Pfam-A.hmm|PF00246.24 evalue:1.4e-20 score:73.5 best_domain_score:70.8 name:Peptidase_M14;
sp YES;
tm_num 1;
73101 73175 signal_peptide
ID metaerg.pl|09776
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
75632 73101 transmembrane_helix
ID metaerg.pl|09777
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i73119-73187o;
76341 75775 CDS
ID metaerg.pl|09778
genomedb_OC d__Bacteria;p__Actinobacteriota;c__UBA4738;o__UBA4738;f__UBA4738;g__UBA4738;s__UBA4738 sp002413305;
genomedb_acc GCA_002413305.1;
genomedb_target db:genomedb|GCA_002413305.1|DHWS01000067.1_32 3 168 evalue:1.6e-29 qcov:88.30 identity:41.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
76981 76895 tRNA
ID metaerg.pl|09779
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
name tRNA_Ser_cag;
77305 78099 CDS
ID metaerg.pl|09780
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664910.1 1 264 evalue:1.2e-86 qcov:100.00 identity:65.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF12401; PF00498; PF16697;
pfam_desc Protein of unknown function (DUF2662) ; FHA domain; Inner membrane component of T3SS, cytoplasmic domain;
pfam_id DUF3662; FHA; Yop-YscD_cpl;
pfam_target db:Pfam-A.hmm|PF12401.8 evalue:3.9e-35 score:119.9 best_domain_score:119.3 name:DUF3662; db:Pfam-A.hmm|PF00498.26 evalue:1.1e-18 score:66.5 best_domain_score:65.4 name:FHA; db:Pfam-A.hmm|PF16697.5 evalue:1.2e-17 score:63.2 best_domain_score:62.5 name:Yop-YscD_cpl;
78101 78574 CDS
ID metaerg.pl|09781
allgo_ids GO:0005515; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441209.1 1 157 evalue:3.0e-42 qcov:100.00 identity:61.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00498; PF16697;
pfam_desc FHA domain; Inner membrane component of T3SS, cytoplasmic domain;
pfam_id FHA; Yop-YscD_cpl;
pfam_target db:Pfam-A.hmm|PF00498.26 evalue:1.4e-18 score:66.3 best_domain_score:65.8 name:FHA; db:Pfam-A.hmm|PF16697.5 evalue:1.4e-13 score:50.2 best_domain_score:49.8 name:Yop-YscD_cpl;
sp YES;
sprot_desc FHA domain-containing protein FhaB;
sprot_id sp|A0QNG6|FHAB_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QNG6|FHAB_MYCS2 5 156 evalue:2.5e-11 qcov:96.80 identity:31.40;
78101 78190 signal_peptide
ID metaerg.pl|09782
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
78571 79905 CDS
ID metaerg.pl|09783
allgo_ids GO:0003824;
allko_ids K01090; K11915;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664912.1 5 404 evalue:1.2e-136 qcov:90.10 identity:63.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00481; PF13672; PF07228;
pfam_desc Protein phosphatase 2C; Protein phosphatase 2C; Stage II sporulation protein E (SpoIIE);
pfam_id PP2C; PP2C_2; SpoIIE;
pfam_target db:Pfam-A.hmm|PF00481.21 evalue:5.1e-16 score:58.3 best_domain_score:47.3 name:PP2C; db:Pfam-A.hmm|PF13672.6 evalue:5.2e-16 score:58.1 best_domain_score:57.6 name:PP2C_2; db:Pfam-A.hmm|PF07228.12 evalue:3e-09 score:36.3 best_domain_score:31.6 name:SpoIIE;
tm_num 1;
78571 79905 transmembrane_helix
ID metaerg.pl|09784
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology o79495-79563i;
79902 81269 CDS
ID metaerg.pl|09785
allgo_ids GO:0016021; GO:0051301; GO:0005886;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664913.1 13 448 evalue:3.7e-157 qcov:95.80 identity:68.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF01098;
pfam_desc Cell cycle protein;
pfam_id FTSW_RODA_SPOVE;
pfam_target db:Pfam-A.hmm|PF01098.19 evalue:1.5e-78 score:263.5 best_domain_score:263.1 name:FTSW_RODA_SPOVE;
sprot_desc Uncharacterized FtsW-like protein;
sprot_id sp|P63761|FTSWL_MYCBO;
sprot_target db:uniprot_sprot|sp|P63761|FTSWL_MYCBO 13 453 evalue:3.1e-86 qcov:96.90 identity:41.20;
tm_num 10;
79902 81269 transmembrane_helix
ID metaerg.pl|09786
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i79959-80012o80040-80108i80121-80174o80202-80270i80304-80372o80541-80594i80613-80681o80907-80975i81012-81080o81108-81176i;
81266 82714 CDS
ID metaerg.pl|09787
allgo_ids GO:0008658; GO:0016021; GO:0005886; GO:0071555; GO:0009252; GO:0008360;
allko_ids K05364; K08384; K12556; K03587; K08282; K05366; K08884;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664914.1 1 478 evalue:1.0e-186 qcov:99.20 identity:70.40;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF00905;
pfam_desc Penicillin binding protein transpeptidase domain;
pfam_id Transpeptidase;
pfam_target db:Pfam-A.hmm|PF00905.22 evalue:2e-67 score:226.8 best_domain_score:226.5 name:Transpeptidase;
sp YES;
sprot_desc Penicillin-binding protein A;
sprot_id sp|P9WKD0|PBPA_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WKD0|PBPA_MYCTO 1 481 evalue:9.5e-86 qcov:99.80 identity:39.80;
tm_num 1;
81266 81358 signal_peptide
ID metaerg.pl|09788
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
81266 82714 transmembrane_helix
ID metaerg.pl|09789
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i81284-81352o;
82764 84455 CDS
ID metaerg.pl|09790
allec_ids 2.7.11.1;
allgo_ids GO:0004672; GO:0005524; GO:0006468; GO:0016021; GO:0005886; GO:0046872; GO:0004674;
allko_ids K08897; K11228; K08790; K11912; K08854; K05744; K08846; K05105; K04444; K11889; K08848; K06633; K05103; K13490; K08860; K08855; K02861; K13418; K08282; K08856; K05102; K08333; K02831; K04426; K07673; K11265; K03407; K13302; K00924; K07682; K04424; K05743; K11623; K06641; K04442; K05111; K12324; K08884; K12319; K12318; K05113; K06103; K08810; K07683; K07778; K04427; K04372; K12321; K03114; K04367; K04443; K01769; K08847; K01728; K02178; K08841; K07675; K07647; K13986; K05688; K13304; K05121; K12323; K13303; K13414; K02486; K12767; K08853; K04688; K06632; K03587; K08286; K08850; K01768; K13417; K02489; K04420; K06272; K08805; K04421; K04425; K05098; K05112; K08809; K08792; K04373; K05096; K07678; K08864; K05097; K12320; K11527; K08859; K04445; K05091; K13416; K02482; K02480; K12132;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664915.1 1 564 evalue:5.7e-208 qcov:100.00 identity:69.90;
kegg_pathway_id 05012; 04150; 04110; 04210; 05014; 04310; 04360; 04640; 04140; 04115; 00040; 02020; 04011; 04010; 00230; 04510; 04111; 04530; 00550;
kegg_pathway_name Parkinson's disease; mTOR signaling pathway; Cell cycle; Apoptosis; Amyotrophic lateral sclerosis (ALS); Wnt signaling pathway; Axon guidance; Hematopoietic cell lineage; Regulation of autophagy; p53 signaling pathway; Pentose and glucuronate interconversions; Two-component system - General; MAPK signaling pathway - yeast; MAPK signaling pathway; Purine metabolism; Focal adhesion; Cell cycle - yeast; Tight junction; Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
pfam_acc PF01636; PF03793; PF00069; PF07714;
pfam_desc Phosphotransferase enzyme family; PASTA domain; Protein kinase domain; Protein tyrosine kinase;
pfam_id APH; PASTA; Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:2.1e-06 score:27.1 best_domain_score:16.6 name:APH; db:Pfam-A.hmm|PF03793.19 evalue:7.6e-43 score:143.5 best_domain_score:51.9 name:PASTA; db:Pfam-A.hmm|PF00069.25 evalue:5e-52 score:176.1 best_domain_score:175.7 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:1.2e-38 score:132.2 best_domain_score:131.7 name:Pkinase_Tyr;
sprot_desc Serine/threonine-protein kinase PknB;
sprot_id sp|A0QNG1|PKNB_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QNG1|PKNB_MYCS2 1 540 evalue:1.7e-97 qcov:95.70 identity:40.00;
tm_num 1;
82764 84455 transmembrane_helix
ID metaerg.pl|09791
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 23.3022; 0.0743135; 23.0522; 0.0973726; 0.0782634;
topology i83688-83756o;
>Feature NODE_70_length_84250_cov_7.15978
555 1646 CDS
ID metaerg.pl|09792
allec_ids 1.1.1.1;
allgo_ids GO:0055114; GO:0004022; GO:0008270;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000001.1_158 1 363 evalue:8.6e-141 qcov:100.00 identity:65.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id PWY-5082; P601-PWY; PWY3O-4108; P461-PWY; PWY-3722; FERMENTATION-PWY; PWY-5057; P441-PWY; PWY-3801; PWY-6028; PWY-5076; PWY-5078; PWY-5079; P122-PWY; ETOH-ACETYLCOA-ANA-PWY; P161-PWY; PWY66-21; PWY-6333; PWY-5486;
metacyc_pathway_name L-methionine degradation III;; (+)-camphor degradation;; L-tyrosine degradation III;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycine betaine biosynthesis II (Gram-positive bacteria);; mixed acid fermentation;; L-valine degradation II;; superpathway of N-acetylneuraminate degradation;; sucrose degradation II (sucrose synthase);; acetoin degradation;; L-leucine degradation III;; L-isoleucine degradation II;; L-phenylalanine degradation III;; heterolactic fermentation;; ethanol degradation I;; acetylene degradation (anaerobic);; ethanol degradation II;; acetaldehyde biosynthesis I;; pyruvate fermentation to ethanol II;;
metacyc_pathway_type METHIONINE-DEG;; Camphor-Degradation;; TYROSINE-DEG;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Betaine-Biosynthesis;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; VALINE-DEG;; CARBOXYLATES-DEG; Super-Pathways;; SUCROSE-DEG;; Carbohydrates-Degradation;; LEUCINE-DEG;; ISOLEUCINE-DEG;; PHENYLALANINE-DEG;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Ethanol-Degradation;; Acetate-Formation; Pyruvate-Ethanol-Fermentation;; Ethanol-Degradation;; Acetaldehyde-Biosynthesis;; Pyruvate-Ethanol-Fermentation;;
pfam_acc PF08240; PF00107; PF13602;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N; ADH_zinc_N_2;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:2.2e-16 score:58.9 best_domain_score:58.0 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:6e-19 score:67.5 best_domain_score:66.9 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:6.6e-08 score:32.9 best_domain_score:28.7 name:ADH_zinc_N_2;
sprot_desc Probable zinc-binding alcohol dehydrogenase Rv1895;
sprot_id sp|O07737|Y1895_MYCTU;
sprot_target db:uniprot_sprot|sp|O07737|Y1895_MYCTU 15 353 evalue:7.1e-25 qcov:93.40 identity:28.90;
2769 1678 CDS
ID metaerg.pl|09793
allec_ids 1.14.19.-;
allgo_ids GO:0006629; GO:0016021; GO:0005886; GO:0016491; GO:0006633;
allko_ids K10255;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000028.1_206 34 363 evalue:2.0e-121 qcov:90.90 identity:61.20;
kegg_pathway_id 01040; 02020;
kegg_pathway_name Biosynthesis of unsaturated fatty acids; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id PWY-5998; PWY-5353; PWY-5997;
metacyc_pathway_name γ-linolenate biosynthesis I (plants);; arachidonate biosynthesis I (6-desaturase, lower eukaryotes);; α-linolenate biosynthesis I (plants and red algae);;
metacyc_pathway_type Gamma-linolenate-Biosynthesis;; Arachidonate-Biosynthesis;; Alpha-Linolenate-Biosynthesis;;
pfam_acc PF00487;
pfam_desc Fatty acid desaturase;
pfam_id FA_desaturase;
pfam_target db:Pfam-A.hmm|PF00487.24 evalue:3.8e-29 score:101.5 best_domain_score:101.5 name:FA_desaturase;
sprot_desc Fatty acid desaturase;
sprot_id sp|O34653|DES_BACSU;
sprot_target db:uniprot_sprot|sp|O34653|DES_BACSU 41 363 evalue:7.2e-70 qcov:89.00 identity:40.60;
tm_num 5;
2769 1678 transmembrane_helix
ID metaerg.pl|09794
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology o1849-1917i1921-1989o2032-2091i2326-2394o2404-2463i;
4107 2911 CDS
ID metaerg.pl|09795
allec_ids 2.3.1.-;
allgo_ids GO:0006633; GO:0016020; GO:0016747;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Gracilimonas;s__Gracilimonas sp002694685;
genomedb_acc GCA_002694685.1;
genomedb_target db:genomedb|GCA_002694685.1|MAL18485.1 1 397 evalue:1.6e-100 qcov:99.70 identity:47.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id PWY-5209; PWY-5965; PWY-5400; PWY-6318; PWY-5307; PWY-5405; PWY-5972; KDO-LIPASYN-PWY; PWY-6412; PWY-5393; PWY-84; PWY-6438; THREOCAT-PWY; P3-PWY; PWY-6295; PWY-6515; ECASYN-PWY; PWY-5284; PWY-6404; CENTBENZCOA-PWY; PWY-6316; PWY-5313; PWY-5140; PWY-6411; PWY-5268; PWY-5987; PWY0-881; KDO-NAGLIPASYN-PWY; PWY-4801; PWY-5184; BENZCOA-PWY; PWY-6418; PWY-6312; PWY-6442; PWY-6397; PWY1-3; PWY-5080; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-6310; PWY-5139; PWY-5437; PWY-5981; PWY-5477; PWY-6113; FASYN-INITIAL-PWY; PWYG-321; PWY-6413; PWY1A0-6325; PWY-6432; LPSSYN-PWY;
metacyc_pathway_name methyl-coenzyme M oxidation to CO2;; fatty acid biosynthesis initiation III;; amaranthin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; gentiodelphin biosynthesis;; superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; (Kdo)2-lipid A biosynthesis I;; ginsenoside degradation II;; raspberry ketone biosynthesis;; resveratrol biosynthesis;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; gallate degradation III (anaerobic);; ; phloridzin biosynthesis;; enterobacterial common antigen biosynthesis;; shisonin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; cannabinoid biosynthesis;; ginsenoside degradation I;; salvianin biosynthesis;; sorgoleone biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of (Kdo)2-lipid A biosynthesis;; aloesone biosynthesis I;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; 4-hydroxycoumarin and dicoumarol biosynthesis;; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; very long chain fatty acid biosynthesis I;; sophorolipid biosynthesis;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; gallotannin biosynthesis;; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; ginsenoside degradation III;; actinorhodin biosynthesis;; curcuminoid biosynthesis;; superpathway of lipopolysaccharide biosynthesis;;
metacyc_pathway_type METHANOGENESIS;; Fatty-acid-biosynthesis;; BETALAIN-ALKALOIDS;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; Lipid-Biosynthesis;; Ginsenoside-Degradation;; POLYKETIDE-SYN;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; GALLATE-DEG;; ; FLAVONOID-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; TERPENOPHENOLICS-SYN;; Ginsenoside-Degradation;; ANTHOCYANIN-SYN;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; Cell-Wall-Biosynthesis;; Storage-Compounds-Biosynthesis;; Fatty-acid-biosynthesis;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; GALLOTANNINS;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; TERPENOID-DEG;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;;
pfam_acc PF08541; PF02797; PF00195; PF08392;
pfam_desc 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; Chalcone and stilbene synthases, C-terminal domain; Chalcone and stilbene synthases, N-terminal domain; FAE1/Type III polyketide synthase-like protein;
pfam_id ACP_syn_III_C; Chal_sti_synt_C; Chal_sti_synt_N; FAE1_CUT1_RppA;
pfam_target db:Pfam-A.hmm|PF08541.10 evalue:5.8e-16 score:57.7 best_domain_score:55.4 name:ACP_syn_III_C; db:Pfam-A.hmm|PF02797.15 evalue:5e-31 score:107.0 best_domain_score:106.4 name:Chal_sti_synt_C; db:Pfam-A.hmm|PF00195.19 evalue:2.1e-21 score:75.6 best_domain_score:74.3 name:Chal_sti_synt_N; db:Pfam-A.hmm|PF08392.12 evalue:6.7e-14 score:51.1 best_domain_score:50.2 name:FAE1_CUT1_RppA;
sprot_desc Alpha-pyrone synthesis polyketide synthase-like Pks18;
sprot_id sp|Q7U064|PKS18_MYCBO;
sprot_target db:uniprot_sprot|sp|Q7U064|PKS18_MYCBO 35 397 evalue:7.5e-36 qcov:91.20 identity:28.00;
5456 4116 CDS
ID metaerg.pl|09796
allgo_ids GO:0006508; GO:0008236;
genomedb_OC d__Bacteria;p__Spirochaetota;c__Leptospirae;o__Leptospirales;f__Leptonemataceae;g__UBA3465;s__UBA3465 sp002730875;
genomedb_acc GCA_002730875.1;
genomedb_target db:genomedb|GCA_002730875.1|MBU44010.1 1 433 evalue:4.2e-121 qcov:97.10 identity:51.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF00561; PF12697; PF12146; PF02566; PF00326;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33; OsmC-like protein; Prolyl oligopeptidase family;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4; OsmC; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:2.2e-08 score:33.3 best_domain_score:32.5 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:7.9e-10 score:38.9 best_domain_score:38.2 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:3.6e-14 score:51.8 best_domain_score:47.2 name:Hydrolase_4; db:Pfam-A.hmm|PF02566.19 evalue:7.8e-20 score:70.5 best_domain_score:68.8 name:OsmC; db:Pfam-A.hmm|PF00326.21 evalue:7.7e-06 score:24.8 best_domain_score:24.1 name:Peptidase_S9;
5993 5502 CDS
ID metaerg.pl|09797
allko_ids K00626; K05554;
genomedb_OC d__Archaea;p__Halobacterota;c__Methanosarcinia;o__Methanotrichales;f__Methanotrichaceae;g__Methanothrix;s__Methanothrix soehngenii;
genomedb_acc GCF_000204415.1;
genomedb_target db:genomedb|GCF_000204415.1|WP_013720316.1 24 161 evalue:2.0e-17 qcov:84.70 identity:39.90;
kegg_pathway_id 00310; 00280; 00632; 00380; 00620; 00072; 01056; 02020; 00071; 00640; 00650;
kegg_pathway_name Lysine degradation; Valine, leucine and isoleucine degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Pyruvate metabolism; Synthesis and degradation of ketone bodies; Biosynthesis of type II polyketide backbone; Two-component system - General; Fatty acid metabolism; Propanoate metabolism; Butanoate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF08327; PF10604;
pfam_desc Activator of Hsp90 ATPase homolog 1-like protein; Polyketide cyclase / dehydrase and lipid transport;
pfam_id AHSA1; Polyketide_cyc2;
pfam_target db:Pfam-A.hmm|PF08327.11 evalue:6.5e-05 score:22.4 best_domain_score:22.3 name:AHSA1; db:Pfam-A.hmm|PF10604.9 evalue:6e-15 score:55.0 best_domain_score:54.7 name:Polyketide_cyc2;
6208 5990 CDS
ID metaerg.pl|09798
allgo_ids GO:0005887;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF06305;
pfam_desc Lipopolysaccharide assembly protein A domain;
pfam_id LapA_dom;
pfam_target db:Pfam-A.hmm|PF06305.11 evalue:6.7e-06 score:25.1 best_domain_score:25.1 name:LapA_dom;
tm_num 2;
6208 5990 transmembrane_helix
ID metaerg.pl|09799
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i6008-6061o6104-6172i;
6705 8012 CDS
ID metaerg.pl|09800
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Kordiimonadaceae;g__Q-1;s__Q-1 sp000710935;
genomedb_acc GCF_000710935.1;
genomedb_target db:genomedb|GCF_000710935.1|WP_052371285.1 16 433 evalue:4.0e-92 qcov:96.10 identity:45.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
sp YES;
tm_num 1;
6705 6827 signal_peptide
ID metaerg.pl|09801
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
6705 8012 transmembrane_helix
ID metaerg.pl|09802
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i6738-6794o;
9077 8091 CDS
ID metaerg.pl|09803
allec_ids 2.1.1.148;
allgo_ids GO:0006231; GO:0050660; GO:0050797; GO:0006235;
allko_ids K03465;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06258.1 1 324 evalue:2.0e-136 qcov:98.80 identity:74.10;
kegg_pathway_id 00670; 00240;
kegg_pathway_name One carbon pool by folate; Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id PWY-6545;
metacyc_pathway_name pyrimidine deoxyribonucleotides de novo biosynthesis III;;
metacyc_pathway_type Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;;
pfam_acc PF02511;
pfam_desc Thymidylate synthase complementing protein;
pfam_id Thy1;
pfam_target db:Pfam-A.hmm|PF02511.15 evalue:2.9e-49 score:166.7 best_domain_score:166.3 name:Thy1;
sprot_desc Flavin-dependent thymidylate synthase;
sprot_id sp|Q5FR18|THYX_GLUOX;
sprot_target db:uniprot_sprot|sp|Q5FR18|THYX_GLUOX 3 298 evalue:9.4e-69 qcov:90.20 identity:50.00;
tigrfam_acc TIGR02170;
tigrfam_desc thymidylate synthase, flavin-dependent;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name thyX;
tigrfam_sub1role 2'-Deoxyribonucleotide metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR02170 evalue:9.7e-54 score:181.2 best_domain_score:180.9 name:TIGR02170;
9353 10390 CDS
ID metaerg.pl|09804
allec_ids 4.1.1.37;
allgo_ids GO:0004853; GO:0006779; GO:0005737; GO:0006782;
allko_ids K01599;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91979.1 1 336 evalue:1.4e-113 qcov:97.40 identity:56.50;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id PWY-5918; PWY-5920; HEMESYN2-PWY; PWY-5529; PWY-5531; HEME-BIOSYNTHESIS-II; PWY0-1415; CHLOROPHYLL-SYN;
metacyc_pathway_name superpathay of heme b biosynthesis from glutamate;; superpathway of b heme biosynthesis from glycine;; heme b biosynthesis II (anaerobic);; superpathway of bacteriochlorophyll a biosynthesis;; 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; heme b biosynthesis I (aerobic);; superpathway of heme b biosynthesis from uroporphyrinogen-III;; 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);;
metacyc_pathway_type Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; Heme-b-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;;
pfam_acc PF01208;
pfam_desc Uroporphyrinogen decarboxylase (URO-D);
pfam_id URO-D;
pfam_target db:Pfam-A.hmm|PF01208.17 evalue:2e-107 score:358.5 best_domain_score:358.4 name:URO-D;
sprot_desc Uroporphyrinogen decarboxylase;
sprot_id sp|A9FZW7|DCUP_SORC5;
sprot_target db:uniprot_sprot|sp|A9FZW7|DCUP_SORC5 1 336 evalue:7.1e-83 qcov:97.40 identity:45.90;
tigrfam_acc TIGR01464;
tigrfam_desc uroporphyrinogen decarboxylase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemE;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01464 evalue:3.9e-109 score:363.9 best_domain_score:363.7 name:TIGR01464;
10534 11610 CDS
ID metaerg.pl|09805
allec_ids 4.99.1.1;
allgo_ids GO:0004325; GO:0006783; GO:0005737; GO:0046872;
allko_ids K01772;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Haloferacaceae;g__Haloplanus;s__Haloplanus natans;
genomedb_acc GCF_000427685.1;
genomedb_target db:genomedb|GCF_000427685.1|WP_049934866.1 4 353 evalue:1.6e-107 qcov:97.80 identity:56.50;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id HEMESYN2-PWY; PWY-5920; PWY-5918; PWY0-1415; HEME-BIOSYNTHESIS-II;
metacyc_pathway_name heme b biosynthesis II (anaerobic);; superpathway of b heme biosynthesis from glycine;; superpathay of heme b biosynthesis from glutamate;; superpathway of heme b biosynthesis from uroporphyrinogen-III;; heme b biosynthesis I (aerobic);;
metacyc_pathway_type Heme-b-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis;;
pfam_acc PF00762;
pfam_desc Ferrochelatase;
pfam_id Ferrochelatase;
pfam_target db:Pfam-A.hmm|PF00762.19 evalue:3.3e-66 score:222.8 best_domain_score:222.4 name:Ferrochelatase;
sprot_desc Ferrochelatase;
sprot_id sp|A5GS98|HEMH_SYNR3;
sprot_target db:uniprot_sprot|sp|A5GS98|HEMH_SYNR3 1 325 evalue:3.1e-33 qcov:90.80 identity:32.70;
tigrfam_acc TIGR00109;
tigrfam_desc ferrochelatase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemH;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00109 evalue:6.7e-48 score:162.9 best_domain_score:162.6 name:TIGR00109;
13249 11786 CDS
ID metaerg.pl|09806
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Gramella;s__Gramella forsetii;
genomedb_acc GCF_000060345.1;
genomedb_target db:genomedb|GCF_000060345.1|WP_041250028.1 30 471 evalue:1.1e-31 qcov:90.80 identity:30.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF07980;
pfam_desc SusD family;
pfam_id SusD_RagB;
pfam_target db:Pfam-A.hmm|PF07980.11 evalue:2.8e-06 score:26.4 best_domain_score:24.0 name:SusD_RagB;
sp YES;
tm_num 1;
11786 11905 lipoprotein_signal_peptide
ID metaerg.pl|09807
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
13249 11786 transmembrane_helix
ID metaerg.pl|09808
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i11846-11905o;
16310 13260 CDS
ID metaerg.pl|09809
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__AG41;s__AG41 sp003222085;
genomedb_acc GCA_003222085.1;
genomedb_target db:genomedb|GCA_003222085.1|PYP03249.1 6 1016 evalue:6.5e-170 qcov:99.50 identity:36.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF13715; PF13620; PF14905; PF07715; PF00593;
pfam_desc CarboxypepD_reg-like domain; Carboxypeptidase regulatory-like domain; Outer membrane protein beta-barrel family; TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id CarbopepD_reg_2; CarboxypepD_reg; OMP_b-brl_3; Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:1.3e-18 score:66.0 best_domain_score:64.0 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF13620.6 evalue:5.1e-20 score:70.8 best_domain_score:68.5 name:CarboxypepD_reg; db:Pfam-A.hmm|PF14905.6 evalue:1e-06 score:27.3 best_domain_score:24.2 name:OMP_b-brl_3; db:Pfam-A.hmm|PF07715.15 evalue:6.2e-20 score:71.0 best_domain_score:71.0 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:2.4e-35 score:122.6 best_domain_score:122.6 name:TonB_dep_Rec;
sp YES;
tigrfam_acc TIGR04056;
tigrfam_desc TonB-linked outer membrane protein, SusC/RagA family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name OMP_RagA_SusC;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR04056 evalue:1.7e-136 score:456.2 best_domain_score:449.5 name:TIGR04056;
13260 13346 signal_peptide
ID metaerg.pl|09810
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
18019 16745 CDS
ID metaerg.pl|09811
allec_ids 1.3.3.4;
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91983.1 1 419 evalue:4.4e-112 qcov:98.80 identity:52.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id PWY-5531; PWY-5529; PWY-5920; CHLOROPHYLL-SYN; PWY-5918; HEME-BIOSYNTHESIS-II; PWY0-1415;
metacyc_pathway_name 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; superpathway of bacteriochlorophyll a biosynthesis;; superpathway of b heme biosynthesis from glycine;; 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);; superpathay of heme b biosynthesis from glutamate;; heme b biosynthesis I (aerobic);; superpathway of heme b biosynthesis from uroporphyrinogen-III;;
metacyc_pathway_type Chlorophyllide-a-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF01593; PF13450;
pfam_desc Flavin containing amine oxidoreductase; NAD(P)-binding Rossmann-like domain;
pfam_id Amino_oxidase; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:2.1e-32 score:112.2 best_domain_score:111.9 name:Amino_oxidase; db:Pfam-A.hmm|PF13450.6 evalue:3.5e-11 score:42.4 best_domain_score:41.2 name:NAD_binding_8;
tigrfam_acc TIGR00562;
tigrfam_desc protoporphyrinogen oxidase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name proto_IX_ox;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00562 evalue:4.4e-37 score:126.9 best_domain_score:125.4 name:TIGR00562;
19381 18125 CDS
ID metaerg.pl|09812
genomedb_OC d__Bacteria;p__Acidobacteriota;c__UBA890;o__UBA890;f__UBA890;g__UBA890;s__UBA890 sp002722645;
genomedb_acc GCA_002722645.1;
genomedb_target db:genomedb|GCA_002722645.1|MBM53044.1 22 383 evalue:3.4e-56 qcov:86.60 identity:37.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF12725;
pfam_desc Protein of unknown function (DUF3810);
pfam_id DUF3810;
pfam_target db:Pfam-A.hmm|PF12725.7 evalue:2.4e-55 score:187.3 best_domain_score:187.0 name:DUF3810;
tm_num 2;
19381 18125 transmembrane_helix
ID metaerg.pl|09813
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology o18191-18244i18305-18373o;
19715 20569 CDS
ID metaerg.pl|09814
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Tc-Br11-B2g6-7;s__Tc-Br11-B2g6-7 sp001564055;
genomedb_acc GCA_001564055.1;
genomedb_target db:genomedb|GCA_001564055.1|LKNB01000016.1_23 1 270 evalue:2.3e-85 qcov:95.10 identity:56.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF04389;
pfam_desc Peptidase family M28;
pfam_id Peptidase_M28;
pfam_target db:Pfam-A.hmm|PF04389.17 evalue:3.2e-41 score:140.4 best_domain_score:140.1 name:Peptidase_M28;
20566 21093 CDS
ID metaerg.pl|09815
genomedb_OC d__Bacteria;p__Bacteroidota;c__UBA10030;o__UBA10030;f__UBA6906;g__UBA11986;s__UBA11986 sp003541875;
genomedb_acc GCA_003541875.1;
genomedb_target db:genomedb|GCA_003541875.1|HCV43497.1 8 162 evalue:1.9e-37 qcov:88.60 identity:49.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF00583; PF13508;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_7;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.3e-14 score:53.7 best_domain_score:53.3 name:Acetyltransf_1; db:Pfam-A.hmm|PF13508.7 evalue:2.4e-07 score:30.3 best_domain_score:29.7 name:Acetyltransf_7;
21286 22914 CDS
ID metaerg.pl|09816
allec_ids 1.2.1.88;
allgo_ids GO:0016491; GO:0055114; GO:0005759; GO:0003842; GO:0016620; GO:0010133; GO:0006560;
allko_ids K00294; K00318; K13821;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108665395.1 4 542 evalue:5.6e-205 qcov:99.40 identity:65.20;
kegg_pathway_id 00251; 00330;
kegg_pathway_name Glutamate metabolism; Arginine and proline metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:2.3e-99 score:332.3 best_domain_score:331.8 name:Aldedh;
sprot_desc Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial;
sprot_id sp|Q54RA2|AL4A1_DICDI;
sprot_target db:uniprot_sprot|sp|Q54RA2|AL4A1_DICDI 8 541 evalue:1.0e-160 qcov:98.50 identity:53.60;
tigrfam_acc TIGR01236;
tigrfam_desc 1-pyrroline-5-carboxylate dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name D1pyr5carbox1;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01236 evalue:8.8e-237 score:786.1 best_domain_score:785.9 name:TIGR01236;
23371 22937 CDS
ID metaerg.pl|09817
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Azospirillum;s__Azospirillum halopraeferens;
genomedb_acc GCF_000429625.1;
genomedb_target db:genomedb|GCF_000429625.1|WP_035692380.1 2 142 evalue:9.3e-14 qcov:97.90 identity:34.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
24944 23364 CDS
ID metaerg.pl|09818
allgo_ids GO:0016020; GO:0022857; GO:0071705; GO:0016021; GO:0005886; GO:0006865; GO:0006814;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Tc-Br11-B2g6-7;s__Tc-Br11-B2g6-7 sp001564055;
genomedb_acc GCA_001564055.1;
genomedb_target db:genomedb|GCA_001564055.1|LKNB01000051.1_8 4 492 evalue:1.7e-161 qcov:93.00 identity:59.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF02028;
pfam_desc BCCT, betaine/carnitine/choline family transporter;
pfam_id BCCT;
pfam_target db:Pfam-A.hmm|PF02028.17 evalue:3.7e-197 score:654.8 best_domain_score:654.6 name:BCCT;
sprot_desc Glycine betaine/proline betaine transporter BetS;
sprot_id sp|G3XCN6|BETS_RHIML;
sprot_target db:uniprot_sprot|sp|G3XCN6|BETS_RHIML 5 494 evalue:3.8e-136 qcov:93.20 identity:51.60;
tigrfam_acc TIGR00842;
tigrfam_desc transporter, betaine/carnitine/choline transporter (BCCT) family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name bcct;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00842 evalue:8.6e-165 score:548.0 best_domain_score:547.7 name:TIGR00842;
tm_num 12;
24944 23364 transmembrane_helix
ID metaerg.pl|09819
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i23400-23459o23517-23585i23622-23690o23781-23849i23937-24005o24048-24116i24135-24203o24297-24365i24402-24461o24543-24611i24690-24758o24768-24836i;
26258 25002 CDS
ID metaerg.pl|09820
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Gracilimonas;s__Gracilimonas sp002694685;
genomedb_acc GCA_002694685.1;
genomedb_target db:genomedb|GCA_002694685.1|MAL18259.1 54 418 evalue:2.2e-124 qcov:87.30 identity:57.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
sp YES;
tm_num 1;
25002 25082 signal_peptide
ID metaerg.pl|09821
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
26258 25002 transmembrane_helix
ID metaerg.pl|09822
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i25020-25073o;
28780 26402 CDS
ID metaerg.pl|09823
allgo_ids GO:0006508;
allko_ids K01730; K01303;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Longimonas;s__Longimonas halophila;
genomedb_acc GCF_002554705.1;
genomedb_target db:genomedb|GCF_002554705.1|WP_098062020.1 5 790 evalue:4.4e-259 qcov:99.20 identity:56.30;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF00930; PF00326;
pfam_desc Dipeptidyl peptidase IV (DPP IV) N-terminal region; Prolyl oligopeptidase family;
pfam_id DPPIV_N; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00930.21 evalue:3.9e-53 score:179.7 best_domain_score:179.0 name:DPPIV_N; db:Pfam-A.hmm|PF00326.21 evalue:3.4e-40 score:137.0 best_domain_score:135.3 name:Peptidase_S9;
sp YES;
tm_num 1;
26402 26524 signal_peptide
ID metaerg.pl|09824
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
28780 26402 transmembrane_helix
ID metaerg.pl|09825
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i26426-26494o;
31113 28834 CDS
ID metaerg.pl|09826
allgo_ids GO:0000155; GO:0007165;
allko_ids K10125; K11629; K02342; K11357; K04757; K07769; K11520; K14509; K12767; K02486; K13761; K11383; K07675; K07717; K13040; K10942; K07680; K07647; K06379; K07676; K10681; K07650; K01769; K07644; K07709; K13532; K07636; K07653; K07638; K02480; K02482; K08801; K14489; K10715; K07678; K02030; K11527; K13587; K10916; K08479; K07674; K03388; K02668; K07656; K01768; K07640; K07710; K07716; K02489; K07697; K01937; K08282; K07704; K10909; K07645; K07677; K07708; K01090; K02491; K13490; K11231; K07643; K07642; K11711; K04486; K11640; K11356; K02484; K13533; K11328; K00873; K07711; K02575; K11633; K07768; K07778; K07683; K11354; K07718; K07698; K07651; K07648; K07679; K02478; K07637; K03407; K07649; K07682; K00936; K07777; K07654; K07652; K08475; K07639; K07673; K01120; K13598; K07641; K07646;
genomedb_OC d__Bacteria;p__Nitrospirota;c__Nitrospiria;o__Nitrospirales;f__Nitrospiraceae;g__Nitrospira;s__Nitrospira sp900078535;
genomedb_acc GCF_900078535.2;
genomedb_target db:genomedb|GCF_900078535.2|WP_087476079.1 93 752 evalue:5.4e-113 qcov:87.00 identity:39.00;
kegg_pathway_id 05111; 00230; 00240; 03030; 00010; 00710; 00790; 00340; 02020; 04011; 00620; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; DNA replication; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Folate biosynthesis; Histidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF02518; PF00512; PF00989; PF08447; PF08448; PF13188; PF13426; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.6e-19 score:69.7 best_domain_score:68.7 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:3.2e-09 score:35.9 best_domain_score:33.3 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:3e-14 score:52.2 best_domain_score:34.3 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:2.1e-13 score:49.6 best_domain_score:37.8 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:2.1e-09 score:36.9 best_domain_score:21.5 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:2.1e-07 score:30.0 best_domain_score:22.1 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:6.6e-13 score:48.1 best_domain_score:33.7 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:2.6e-21 score:75.1 best_domain_score:74.1 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.5e-21 score:76.0 best_domain_score:41.9 name:TIGR00229;
tm_num 2;
31113 28834 transmembrane_helix
ID metaerg.pl|09827
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology o28861-28920i28957-29025o;
31355 32623 CDS
ID metaerg.pl|09828
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__MEBICO9517;g__MEBICO9517;s__MEBICO9517 sp003285105;
genomedb_acc GCA_003285105.1;
genomedb_target db:genomedb|GCA_003285105.1|CP030158.1_376 2 411 evalue:1.3e-111 qcov:97.20 identity:54.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF01593; PF00890; PF05834; PF13450; PF07992;
pfam_desc Flavin containing amine oxidoreductase; FAD binding domain; Lycopene cyclase protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; FAD_binding_2; Lycopene_cycl; NAD_binding_8; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:2.7e-45 score:154.7 best_domain_score:154.5 name:Amino_oxidase; db:Pfam-A.hmm|PF00890.24 evalue:2.5e-06 score:26.0 best_domain_score:24.9 name:FAD_binding_2; db:Pfam-A.hmm|PF05834.12 evalue:3e-06 score:25.8 best_domain_score:20.4 name:Lycopene_cycl; db:Pfam-A.hmm|PF13450.6 evalue:7e-16 score:57.5 best_domain_score:55.8 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:1.8e-08 score:33.2 best_domain_score:21.4 name:Pyr_redox_2;
34280 32631 CDS
ID metaerg.pl|09829
allec_ids 1.3.99.31; 1.14.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0016117;
allko_ids K03388;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000237.1_30 15 519 evalue:7.9e-223 qcov:92.00 identity:71.70;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id TOLSULFDEG-PWY; PWY-5288; PWY-5175; PWY-5987; PWY-5366; PWY-6475; CAROTENOID-PWY; 4TOLCARBDEG-PWY; PWY-5397; PWY-5944; PWY-6287; PWY-762; PWY-782; PWY-5947; PWY-5942; PWY-5362; PWY-5367;
metacyc_pathway_name 4-toluenesulfonate degradation I;; astaxanthin biosynthesis (bacteria, fungi, algae);; lactucaxanthin biosynthesis;; sorgoleone biosynthesis;; palmitoleate biosynthesis II (plants and bacteria);; trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria);; superpathway of carotenoid biosynthesis in plants;; 4-toluenecarboxylate degradation;; crocetin biosynthesis;; zeaxanthin biosynthesis;; neurosporene biosynthesis;; phospholipid desaturation;; glycolipid desaturation;; lutein biosynthesis;; trans-lycopene biosynthesis I;; sapienate biosynthesis;; petroselinate biosynthesis;;
metacyc_pathway_type 4-Toluenesulfonate-Degradation;; C40-Carotenoids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; QUINONE-SYN;; Palmitoleate-Biosynthesis;; Lycopene-Biosynthesis;; C40-Carotenoids-Biosynthesis; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; APOCAROTENOID-SYN;; C40-Carotenoids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Phospholipid-Biosynthesis;; Glycolipids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Lycopene-Biosynthesis; Super-Pathways;; Unsaturated-Fatty-Acids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;;
pfam_acc PF01593; PF01266; PF00890; PF13450; PF00070;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; DAO; FAD_binding_2; NAD_binding_8; Pyr_redox;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:2.6e-36 score:125.1 best_domain_score:124.3 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:5.8e-10 score:38.5 best_domain_score:20.6 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.9e-07 score:29.7 best_domain_score:26.1 name:FAD_binding_2; db:Pfam-A.hmm|PF13450.6 evalue:7.5e-15 score:54.2 best_domain_score:52.4 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:4.2e-06 score:26.5 best_domain_score:20.4 name:Pyr_redox;
sprot_desc Phytoene desaturase (lycopene-forming);
sprot_id sp|P22871|CRTI_ESCVU;
sprot_target db:uniprot_sprot|sp|P22871|CRTI_ESCVU 15 503 evalue:2.0e-124 qcov:89.10 identity:46.40;
tigrfam_acc TIGR02734;
tigrfam_desc phytoene desaturase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name crtI_fam;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02734 evalue:1.4e-174 score:580.7 best_domain_score:580.4 name:TIGR02734;
34507 35937 CDS
ID metaerg.pl|09830
allec_ids 1.3.3.4;
allgo_ids GO:0016491; GO:0055114; GO:0009507; GO:0009941; GO:0005739; GO:0009536; GO:0004729; GO:0015995; GO:0009793; GO:0006782;
allko_ids K00231;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rhodothermaceae;g__Rhodothermus;s__Rhodothermus profundi;
genomedb_acc GCF_900142415.1;
genomedb_target db:genomedb|GCF_900142415.1|WP_072715770.1 13 471 evalue:1.3e-101 qcov:96.40 identity:47.90;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id HEME-BIOSYNTHESIS-II; PWY0-1415; PWY-5920; CHLOROPHYLL-SYN; PWY-5918; PWY-5529; PWY-5531;
metacyc_pathway_name heme b biosynthesis I (aerobic);; superpathway of heme b biosynthesis from uroporphyrinogen-III;; superpathway of b heme biosynthesis from glycine;; 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);; superpathay of heme b biosynthesis from glutamate;; superpathway of bacteriochlorophyll a biosynthesis;; 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);;
metacyc_pathway_type Heme-b-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;;
pfam_acc PF01593; PF01266; PF00890; PF01494; PF13450; PF13454;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; FAD binding domain; NAD(P)-binding Rossmann-like domain; FAD-NAD(P)-binding;
pfam_id Amino_oxidase; DAO; FAD_binding_2; FAD_binding_3; NAD_binding_8; NAD_binding_9;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:3.2e-65 score:220.4 best_domain_score:220.2 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:1.2e-07 score:30.9 best_domain_score:28.8 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:3.3e-08 score:32.3 best_domain_score:31.6 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:1.8e-05 score:23.4 best_domain_score:20.4 name:FAD_binding_3; db:Pfam-A.hmm|PF13450.6 evalue:8.8e-16 score:57.1 best_domain_score:55.8 name:NAD_binding_8; db:Pfam-A.hmm|PF13454.6 evalue:7.4e-05 score:22.0 best_domain_score:15.4 name:NAD_binding_9;
sprot_desc Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial;
sprot_id sp|Q8S9J1|PPOCM_ARATH;
sprot_target db:uniprot_sprot|sp|Q8S9J1|PPOCM_ARATH 15 474 evalue:1.8e-60 qcov:96.60 identity:31.50;
tigrfam_acc TIGR00562;
tigrfam_desc protoporphyrinogen oxidase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name proto_IX_ox;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00562 evalue:9.2e-76 score:254.4 best_domain_score:254.0 name:TIGR00562;
36038 37108 CDS
ID metaerg.pl|09831
allec_ids 6.6.1.1;
allgo_ids GO:0005524; GO:0016887; GO:0016851; GO:0030494; GO:0015979;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Skermanella;s__Skermanella stibiiresistens;
genomedb_acc GCF_000576635.1;
genomedb_target db:genomedb|GCF_000576635.1|WP_084165338.1 5 354 evalue:5.5e-124 qcov:98.30 identity:65.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id CHLOROPHYLL-SYN; PWY-5529; PWY-5531;
metacyc_pathway_name 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);; superpathway of bacteriochlorophyll a biosynthesis;; 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);;
metacyc_pathway_type Chlorophyllide-a-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;;
pfam_acc PF07728; PF17863; PF01078; PF00158;
pfam_desc AAA domain (dynein-related subfamily); AAA lid domain; Magnesium chelatase, subunit ChlI; Sigma-54 interaction domain;
pfam_id AAA_5; AAA_lid_2; Mg_chelatase; Sigma54_activat;
pfam_target db:Pfam-A.hmm|PF07728.14 evalue:2.3e-08 score:33.3 best_domain_score:20.9 name:AAA_5; db:Pfam-A.hmm|PF17863.1 evalue:1e-18 score:66.2 best_domain_score:66.2 name:AAA_lid_2; db:Pfam-A.hmm|PF01078.21 evalue:9.4e-16 score:57.0 best_domain_score:32.2 name:Mg_chelatase; db:Pfam-A.hmm|PF00158.26 evalue:3.3e-05 score:22.9 best_domain_score:12.7 name:Sigma54_activat;
sprot_desc Magnesium-chelatase 38 kDa subunit;
sprot_id sp|Q9WXA9|BCHI_ACIRU;
sprot_target db:uniprot_sprot|sp|Q9WXA9|BCHI_ACIRU 5 354 evalue:4.2e-115 qcov:98.30 identity:62.00;
tigrfam_acc TIGR02030;
tigrfam_desc magnesium chelatase ATPase subunit I;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name BchI-ChlI;
tigrfam_sub1role Chlorophyll and bacteriochlorphyll;
tigrfam_target db:TIGRFAMs.hmm|TIGR02030 evalue:1.6e-150 score:500.1 best_domain_score:499.2 name:TIGR02030;
37112 39043 CDS
ID metaerg.pl|09832
allec_ids 6.6.1.1;
allgo_ids GO:0003677; GO:0005524; GO:0006270; GO:0016851; GO:0030494; GO:0015979;
allko_ids K03404;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas rosea;
genomedb_acc GCF_000429045.1;
genomedb_target db:genomedb|GCF_000429045.1|WP_029029332.1 23 636 evalue:2.3e-104 qcov:95.50 identity:45.70;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id PWY-5531; PWY-5529; CHLOROPHYLL-SYN;
metacyc_pathway_name 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; superpathway of bacteriochlorophyll a biosynthesis;; 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);;
metacyc_pathway_type Chlorophyllide-a-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;;
pfam_acc PF00493; PF00092; PF13519;
pfam_desc MCM P-loop domain; von Willebrand factor type A domain; von Willebrand factor type A domain;
pfam_id MCM; VWA; VWA_2;
pfam_target db:Pfam-A.hmm|PF00493.23 evalue:1.2e-05 score:23.8 best_domain_score:22.7 name:MCM; db:Pfam-A.hmm|PF00092.28 evalue:5.3e-07 score:29.3 best_domain_score:28.7 name:VWA; db:Pfam-A.hmm|PF13519.6 evalue:6.5e-13 score:48.5 best_domain_score:47.5 name:VWA_2;
sprot_desc Magnesium-chelatase 60 kDa subunit;
sprot_id sp|P26175|BCHD_RHOCB;
sprot_target db:uniprot_sprot|sp|P26175|BCHD_RHOCB 25 641 evalue:1.7e-61 qcov:96.00 identity:36.60;
39040 39894 CDS
ID metaerg.pl|09833
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__SCN-70-22;s__SCN-70-22 sp001724275;
genomedb_acc GCA_001724275.1;
genomedb_target db:genomedb|GCA_001724275.1|ODT02587.1 31 278 evalue:6.3e-30 qcov:87.30 identity:35.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF04240;
pfam_desc Carotenoid biosynthesis protein;
pfam_id Caroten_synth;
pfam_target db:Pfam-A.hmm|PF04240.12 evalue:1.7e-41 score:141.6 best_domain_score:141.6 name:Caroten_synth;
tm_num 8;
39040 39894 transmembrane_helix
ID metaerg.pl|09834
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i39100-39168o39211-39279i39298-39366o39433-39501i39520-39573o39640-39708i39745-39798o39808-39867i;
39891 41159 CDS
ID metaerg.pl|09835
allec_ids 2.1.1.210;
allgo_ids GO:0008171; GO:0016117; GO:0015995; GO:0015979;
allko_ids K09846;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Ga0077523;g__Ga0077523;s__Ga0077523 sp001464695;
genomedb_acc GCA_001464695.1;
genomedb_target db:genomedb|GCA_001464695.1|LNDQ01000120.1_67 56 421 evalue:6.7e-105 qcov:86.70 identity:56.10;
kegg_pathway_id 00906;
kegg_pathway_name Carotenoid biosynthesis - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF16864; PF00891; PF13489;
pfam_desc Dimerisation domain; O-methyltransferase domain; Methyltransferase domain;
pfam_id Dimerisation2; Methyltransf_2; Methyltransf_23;
pfam_target db:Pfam-A.hmm|PF16864.5 evalue:9.8e-12 score:43.9 best_domain_score:39.7 name:Dimerisation2; db:Pfam-A.hmm|PF00891.18 evalue:1.3e-45 score:154.6 best_domain_score:154.2 name:Methyltransf_2; db:Pfam-A.hmm|PF13489.6 evalue:3.7e-08 score:32.6 best_domain_score:31.9 name:Methyltransf_23;
sprot_desc Demethylspheroidene O-methyltransferase;
sprot_id sp|P54906|CRTF_RHOS4;
sprot_target db:uniprot_sprot|sp|P54906|CRTF_RHOS4 64 405 evalue:1.1e-61 qcov:81.00 identity:42.60;
41367 43454 CDS
ID metaerg.pl|09836
allec_ids 3.4.24.70;
allgo_ids GO:0004222; GO:0006508; GO:0046872; GO:0006518; GO:0006465;
allko_ids K01414;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000280.1_42 19 692 evalue:3.7e-225 qcov:97.00 identity:54.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF01432;
pfam_desc Peptidase family M3;
pfam_id Peptidase_M3;
pfam_target db:Pfam-A.hmm|PF01432.20 evalue:8.6e-125 score:416.8 best_domain_score:416.4 name:Peptidase_M3;
sprot_desc Oligopeptidase A;
sprot_id sp|P44573|OPDA_HAEIN;
sprot_target db:uniprot_sprot|sp|P44573|OPDA_HAEIN 19 688 evalue:1.4e-135 qcov:96.40 identity:37.90;
43592 44875 CDS
ID metaerg.pl|09837
allgo_ids GO:0043190; GO:0030288; GO:0042301; GO:0006974; GO:0035435; GO:0006817; GO:0010921; GO:0009314;
allko_ids K02040;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__UBA4720;s__UBA4720 sp003223425;
genomedb_acc GCA_003223425.1;
genomedb_target db:genomedb|GCA_003223425.1|PYP54011.1 27 352 evalue:1.1e-99 qcov:76.30 identity:52.10;
kegg_pathway_id 02010; 02020;
kegg_pathway_name ABC transporters - General; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF12727; PF12849; PF01547;
pfam_desc PBP superfamily domain; PBP superfamily domain; Bacterial extracellular solute-binding protein;
pfam_id PBP_like; PBP_like_2; SBP_bac_1;
pfam_target db:Pfam-A.hmm|PF12727.7 evalue:1e-10 score:40.3 best_domain_score:38.1 name:PBP_like; db:Pfam-A.hmm|PF12849.7 evalue:5.5e-52 score:176.4 best_domain_score:176.1 name:PBP_like_2; db:Pfam-A.hmm|PF01547.25 evalue:2.1e-07 score:30.4 best_domain_score:29.4 name:SBP_bac_1;
sp YES;
sprot_desc Phosphate-binding protein PstS;
sprot_id sp|P0AG82|PSTS_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AG82|PSTS_ECOLI 67 377 evalue:1.4e-59 qcov:72.80 identity:37.80;
tigrfam_acc TIGR00975;
tigrfam_desc phosphate ABC transporter, phosphate-binding protein PstS;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3a0107s03;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00975 evalue:2.7e-104 score:347.8 best_domain_score:347.6 name:TIGR00975;
43592 43687 lipoprotein_signal_peptide
ID metaerg.pl|09838
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
44859 45830 CDS
ID metaerg.pl|09839
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0005315; GO:0006817;
allko_ids K02038; K02037;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Koribacteraceae;g__Gp1-AA124;s__Gp1-AA124 sp003225075;
genomedb_acc GCA_003225075.1;
genomedb_target db:genomedb|GCA_003225075.1|PYX65588.1 14 319 evalue:1.9e-91 qcov:94.70 identity:59.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.8e-20 score:72.7 best_domain_score:72.7 name:BPD_transp_1;
sprot_desc Phosphate transport system permease protein PstC;
sprot_id sp|Q98FL3|PSTC_RHILO;
sprot_target db:uniprot_sprot|sp|Q98FL3|PSTC_RHILO 23 322 evalue:7.1e-53 qcov:92.90 identity:39.50;
tigrfam_acc TIGR02138;
tigrfam_desc phosphate ABC transporter, permease protein PstC;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name phosphate_pstC;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02138 evalue:5.9e-92 score:307.0 best_domain_score:306.8 name:TIGR02138;
tm_num 7;
44859 45830 transmembrane_helix
ID metaerg.pl|09840
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology o44934-45002i45114-45182o45240-45308i45369-45437o45516-45584i45621-45689o45732-45800i;
45830 46714 CDS
ID metaerg.pl|09841
allgo_ids GO:0016020; GO:0055085; GO:0005887; GO:0005315; GO:0006974; GO:0035435; GO:0006817; GO:0010921;
allko_ids K02037; K02038;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Fen-1247;s__Fen-1247 sp003136975;
genomedb_acc GCA_003136975.1;
genomedb_target db:genomedb|GCA_003136975.1|PLEG01000117.1_2 16 291 evalue:2.9e-86 qcov:93.90 identity:61.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.1e-26 score:92.9 best_domain_score:92.9 name:BPD_transp_1;
sprot_desc Phosphate transport system permease protein PstA;
sprot_id sp|P07654|PSTA_ECOLI;
sprot_target db:uniprot_sprot|sp|P07654|PSTA_ECOLI 17 286 evalue:1.2e-54 qcov:91.80 identity:43.90;
tigrfam_acc TIGR00974;
tigrfam_desc phosphate ABC transporter, permease protein PstA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3a0107s02c;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00974 evalue:2.2e-82 score:275.4 best_domain_score:275.1 name:TIGR00974;
tm_num 6;
45830 46714 transmembrane_helix
ID metaerg.pl|09842
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i45914-45982o46082-46150i46187-46255o46265-46324i46415-46483o46622-46690i;
46716 47585 CDS
ID metaerg.pl|09843
allec_ids 7.3.2.1; 3.6.3.27;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015415; GO:0005315;
allko_ids K02000; K02023; K02036; K05816; K10111; K10112; K01995; K02049; K11072; K02045; K06021; K02071; K06861; K01996; K02017; K02052; K02006; K02010; K05847;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__SCN-70-22;s__SCN-70-22 sp001724275;
genomedb_acc GCA_001724275.1;
genomedb_target db:genomedb|GCA_001724275.1|ODT02625.1 42 289 evalue:2.9e-99 qcov:85.80 identity:74.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.8e-11 score:43.0 best_domain_score:22.1 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:3.6e-30 score:104.5 best_domain_score:104.1 name:ABC_tran;
sprot_desc Phosphate import ATP-binding protein PstB;
sprot_id sp|Q30YR3|PSTB_DESAG;
sprot_target db:uniprot_sprot|sp|Q30YR3|PSTB_DESAG 42 289 evalue:2.0e-94 qcov:85.80 identity:71.40;
tigrfam_acc TIGR00972;
tigrfam_desc phosphate ABC transporter, ATP-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3a0107s01c2;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00972 evalue:6.6e-120 score:398.2 best_domain_score:398.0 name:TIGR00972;
47582 48298 CDS
ID metaerg.pl|09844
allgo_ids GO:0005737; GO:0042803; GO:0030643; GO:0045936; GO:2000186; GO:0006817;
allko_ids K02039;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__20CM-2-65-7;s__20CM-2-65-7 sp003221895;
genomedb_acc GCA_003221895.1;
genomedb_target db:genomedb|GCA_003221895.1|PYP14017.1 11 223 evalue:6.6e-65 qcov:89.50 identity:63.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF01895;
pfam_desc PhoU domain;
pfam_id PhoU;
pfam_target db:Pfam-A.hmm|PF01895.19 evalue:3.2e-42 score:142.2 best_domain_score:75.6 name:PhoU;
sprot_desc Phosphate-specific transport system accessory protein PhoU homolog;
sprot_id sp|Q9X5E1|PHOU_ZYMMO;
sprot_target db:uniprot_sprot|sp|Q9X5E1|PHOU_ZYMMO 4 219 evalue:5.3e-37 qcov:90.80 identity:40.30;
tigrfam_acc TIGR02135;
tigrfam_desc phosphate transport system regulatory protein PhoU;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name phoU_full;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02135 evalue:5.9e-62 score:208.2 best_domain_score:208.0 name:TIGR02135;
48436 49434 CDS
ID metaerg.pl|09845
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Idiomarina;s__Idiomarina sp000218785;
genomedb_acc GCF_000218785.1;
genomedb_target db:genomedb|GCF_000218785.1|WP_007419840.1 65 326 evalue:4.0e-60 qcov:78.90 identity:43.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF00497;
pfam_desc Bacterial extracellular solute-binding proteins, family 3;
pfam_id SBP_bac_3;
pfam_target db:Pfam-A.hmm|PF00497.20 evalue:3.6e-08 score:32.3 best_domain_score:31.9 name:SBP_bac_3;
sp YES;
48436 48528 lipoprotein_signal_peptide
ID metaerg.pl|09846
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
51483 49486 CDS
ID metaerg.pl|09847
allgo_ids GO:0003824;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91184.1 18 663 evalue:7.4e-183 qcov:97.10 identity:52.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF01663;
pfam_desc Type I phosphodiesterase / nucleotide pyrophosphatase;
pfam_id Phosphodiest;
pfam_target db:Pfam-A.hmm|PF01663.22 evalue:8.7e-16 score:57.7 best_domain_score:31.9 name:Phosphodiest;
sp YES;
49486 49551 lipoprotein_signal_peptide
ID metaerg.pl|09848
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
51683 52960 CDS
ID metaerg.pl|09849
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__UBA7656;f__UBA7656;g__UBA7656;s__UBA7656 sp002483445;
genomedb_acc GCA_002483445.1;
genomedb_target db:genomedb|GCA_002483445.1|DLHY01000113.1_4 41 422 evalue:2.6e-136 qcov:89.90 identity:60.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF00144;
pfam_desc Beta-lactamase;
pfam_id Beta-lactamase;
pfam_target db:Pfam-A.hmm|PF00144.24 evalue:3.2e-17 score:62.0 best_domain_score:61.2 name:Beta-lactamase;
sp YES;
51683 51802 signal_peptide
ID metaerg.pl|09850
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
53850 52972 CDS
ID metaerg.pl|09851
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
sp YES;
tm_num 1;
52972 53064 signal_peptide
ID metaerg.pl|09852
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
53850 52972 transmembrane_helix
ID metaerg.pl|09853
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i53008-53067o;
55547 53961 CDS
ID metaerg.pl|09854
allgo_ids GO:0004181; GO:0006508; GO:0008270;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002501085;
genomedb_acc GCA_002501085.1;
genomedb_target db:genomedb|GCA_002501085.1|DLRL01000031.1_39 33 528 evalue:5.6e-157 qcov:93.90 identity:53.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF00246;
pfam_desc Zinc carboxypeptidase;
pfam_id Peptidase_M14;
pfam_target db:Pfam-A.hmm|PF00246.24 evalue:1.9e-12 score:46.9 best_domain_score:42.0 name:Peptidase_M14;
sp YES;
tm_num 1;
53961 54047 signal_peptide
ID metaerg.pl|09855
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
55547 53961 transmembrane_helix
ID metaerg.pl|09856
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i53979-54038o;
57924 55579 CDS
ID metaerg.pl|09857
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89732.1 4 780 evalue:2.0e-275 qcov:99.50 identity:58.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF16313; PF17148; PF17162;
pfam_desc Met-zincin; Domain of unknown function (DUF5117); Domain of unknown function (DUF5118);
pfam_id DUF4953; DUF5117; DUF5118;
pfam_target db:Pfam-A.hmm|PF16313.5 evalue:2.9e-88 score:295.4 best_domain_score:294.8 name:DUF4953; db:Pfam-A.hmm|PF17148.4 evalue:4.2e-37 score:127.1 best_domain_score:126.5 name:DUF5117; db:Pfam-A.hmm|PF17162.4 evalue:9.8e-17 score:59.8 best_domain_score:59.0 name:DUF5118;
sp YES;
55579 55611 lipoprotein_signal_peptide
ID metaerg.pl|09858
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
60191 58131 CDS
ID metaerg.pl|09859
allko_ids K03332;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000007.1_30 14 678 evalue:1.5e-207 qcov:96.90 identity:54.90;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF02368; PF08309;
pfam_desc Bacterial Ig-like domain (group 2); LVIVD repeat;
pfam_id Big_2; LVIVD;
pfam_target db:Pfam-A.hmm|PF02368.18 evalue:6e-09 score:34.9 best_domain_score:33.1 name:Big_2; db:Pfam-A.hmm|PF08309.11 evalue:1.9e-05 score:23.1 best_domain_score:11.0 name:LVIVD;
sp YES;
58131 58208 signal_peptide
ID metaerg.pl|09860
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
60406 61185 CDS
ID metaerg.pl|09861
allec_ids 1.1.1.381;
allgo_ids GO:0035527;
allko_ids K12420; K16066;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002724575;
genomedb_acc GCA_002724575.1;
genomedb_target db:genomedb|GCA_002724575.1|MBO76181.1 1 255 evalue:1.3e-87 qcov:98.50 identity:65.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:4.8e-48 score:162.4 best_domain_score:162.1 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2e-37 score:128.2 best_domain_score:127.9 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:2.4e-10 score:39.8 best_domain_score:39.4 name:KR;
sprot_desc NADP-dependent 3-hydroxy acid dehydrogenase YdfG;
sprot_id sp|P69935|YDFG_SALTI;
sprot_target db:uniprot_sprot|sp|P69935|YDFG_SALTI 9 247 evalue:6.1e-55 qcov:92.30 identity:48.30;
61307 62530 CDS
ID metaerg.pl|09862
allgo_ids GO:0005351; GO:0008643; GO:0016020; GO:0016021; GO:0005886; GO:0015293; GO:0006101;
allko_ids K08177; K08153; K03762; K02575; K05820; K08161; K08169; K12307; K08221; K08224; K08219; K08217; K03288;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000133.1_6 1 370 evalue:5.8e-130 qcov:90.90 identity:64.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF01306; PF07690; PF00083;
pfam_desc LacY proton/sugar symporter; Major Facilitator Superfamily; Sugar (and other) transporter;
pfam_id LacY_symp; MFS_1; Sugar_tr;
pfam_target db:Pfam-A.hmm|PF01306.19 evalue:3.5e-07 score:28.6 best_domain_score:19.9 name:LacY_symp; db:Pfam-A.hmm|PF07690.16 evalue:4.4e-52 score:176.4 best_domain_score:144.8 name:MFS_1; db:Pfam-A.hmm|PF00083.24 evalue:1.7e-11 score:42.9 best_domain_score:29.2 name:Sugar_tr;
sprot_desc Citrate-proton symporter;
sprot_id sp|P0A2G4|CITA_SALTI;
sprot_target db:uniprot_sprot|sp|P0A2G4|CITA_SALTI 30 355 evalue:2.7e-09 qcov:80.10 identity:26.20;
tm_num 11;
61307 62530 transmembrane_helix
ID metaerg.pl|09863
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology o61364-61432i61457-61516o61529-61597i61631-61699o61709-61777i61880-61948o61958-62026i62063-62131o62159-62227i62246-62314o62327-62395i;
62628 63848 CDS
ID metaerg.pl|09864
allgo_ids GO:0000160;
allko_ids K07711; K07768; K07778; K07718; K07651; K07648; K02478; K07679; K03407; K07682; K07654; K07652; K01120; K07673; K07639; K08475; K07646; K07641; K08282; K07704; K07677; K07645; K07708; K02491; K11231; K07642; K11711; K11640; K11356; K02484; K07636; K07653; K02480; K02482; K07678; K10715; K11527; K10916; K08479; K03388; K02668; K07710; K07716; K02489; K11357; K10125; K04757; K13761; K02486; K11383; K12767; K07717; K07675; K07647; K07676; K10681; K06379; K07644; K07709;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000133.1_4 16 373 evalue:1.3e-49 qcov:88.20 identity:37.70;
kegg_pathway_id 05111; 00790; 00230; 03090; 02020; 04011;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Folate biosynthesis; Purine metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF02585; PF00072;
pfam_desc GlcNAc-PI de-N-acetylase; Response regulator receiver domain;
pfam_id PIG-L; Response_reg;
pfam_target db:Pfam-A.hmm|PF02585.17 evalue:9e-07 score:28.8 best_domain_score:23.5 name:PIG-L; db:Pfam-A.hmm|PF00072.24 evalue:8.3e-23 score:79.9 best_domain_score:79.4 name:Response_reg;
63845 64489 CDS
ID metaerg.pl|09865
allec_ids 3.2.2.-;
allgo_ids GO:0005829; GO:0016799; GO:0009691;
genomedb_OC d__Bacteria;p__Binatota;c__Binatia;o__Binatales;f__Binataceae;g__Binatus;s__Binatus sp003135855;
genomedb_acc GCA_003135855.1;
genomedb_target db:genomedb|GCA_003135855.1|PNBD01000153.1_104 21 214 evalue:5.7e-60 qcov:90.70 identity:57.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id PWY-5381; PWY-2681;
metacyc_pathway_name pyridine nucleotide cycling (plants);; trans-zeatin biosynthesis;;
metacyc_pathway_type NAD-Metabolism;; CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF18306; PF03641;
pfam_desc SLOG cluster4 family; Possible lysine decarboxylase;
pfam_id LDcluster4; Lysine_decarbox;
pfam_target db:Pfam-A.hmm|PF18306.1 evalue:2.3e-16 score:59.0 best_domain_score:58.7 name:LDcluster4; db:Pfam-A.hmm|PF03641.14 evalue:3.1e-38 score:130.1 best_domain_score:129.8 name:Lysine_decarbox;
sprot_desc Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase;
sprot_id sp|P48636|LOGH_PSEAE;
sprot_target db:uniprot_sprot|sp|P48636|LOGH_PSEAE 22 210 evalue:8.6e-55 qcov:88.30 identity:51.90;
tigrfam_acc TIGR00730;
tigrfam_desc TIGR00730 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00730;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00730 evalue:2.5e-57 score:192.6 best_domain_score:192.5 name:TIGR00730;
64680 65606 CDS
ID metaerg.pl|09866
allec_ids 2.1.3.15; 6.4.1.2;
allgo_ids GO:0003989; GO:0006633; GO:0009317; GO:0005524; GO:0016743; GO:2001295;
allko_ids K01962;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000133.1_3 1 307 evalue:4.9e-129 qcov:99.70 identity:74.30;
kegg_pathway_id 00253; 00640; 00061; 00620;
kegg_pathway_name Tetracycline biosynthesis; Propanoate metabolism; Fatty acid biosynthesis; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id PWY-5156; PWY0-1264; PWY-5789; PWY-5743; PWY-6113; PWY-6285; FASYN-INITIAL-PWY; PWY-4381; PWY0-881;
metacyc_pathway_name superpathway of fatty acid biosynthesis II (plant);; biotin-carboxyl carrier protein assembly;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; 3-hydroxypropanoate cycle;; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; superpathway of fatty acid biosynthesis initiation (E. coli);; fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis I (E. coli);;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; Autotrophic-CO2-Fixation;; Autotrophic-CO2-Fixation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF03255; PF01039; PF06833;
pfam_desc Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; Carboxyl transferase domain; Malonate decarboxylase gamma subunit (MdcE);
pfam_id ACCA; Carboxyl_trans; MdcE;
pfam_target db:Pfam-A.hmm|PF03255.14 evalue:2.7e-60 score:201.6 best_domain_score:201.0 name:ACCA; db:Pfam-A.hmm|PF01039.22 evalue:2.5e-17 score:61.9 best_domain_score:61.8 name:Carboxyl_trans; db:Pfam-A.hmm|PF06833.11 evalue:7.1e-05 score:21.6 best_domain_score:21.1 name:MdcE;
sprot_desc Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha;
sprot_id sp|B8GQ68|ACCA_THISH;
sprot_target db:uniprot_sprot|sp|B8GQ68|ACCA_THISH 1 307 evalue:2.6e-97 qcov:99.70 identity:56.00;
tigrfam_acc TIGR00513;
tigrfam_desc acetyl-CoA carboxylase, carboxyl transferase, alpha subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accA;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00513 evalue:3.9e-136 score:452.8 best_domain_score:452.6 name:TIGR00513;
65619 66485 CDS
ID metaerg.pl|09867
allgo_ids GO:0005737; GO:0030435;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2982;s__UBA2982 sp002347035;
genomedb_acc GCA_002347035.1;
genomedb_target db:genomedb|GCA_002347035.1|DEAM01000022.1_45 1 279 evalue:2.1e-110 qcov:96.90 identity:71.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF04468;
pfam_desc PSP1 C-terminal conserved region;
pfam_id PSP1;
pfam_target db:Pfam-A.hmm|PF04468.12 evalue:3.9e-26 score:90.4 best_domain_score:89.7 name:PSP1;
sprot_desc Stage 0 sporulation protein YaaT;
sprot_id sp|P37541|YAAT_BACSU;
sprot_target db:uniprot_sprot|sp|P37541|YAAT_BACSU 10 272 evalue:1.2e-43 qcov:91.30 identity:39.20;
66482 68053 CDS
ID metaerg.pl|09868
allec_ids 6.1.1.10;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0046872; GO:0004825; GO:0000049; GO:0006431;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000082.1_99 1 522 evalue:2.6e-207 qcov:99.80 identity:67.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00133; PF01406; PF09334;
pfam_desc tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (C) catalytic domain; tRNA synthetases class I (M);
pfam_id tRNA-synt_1; tRNA-synt_1e; tRNA-synt_1g;
pfam_target db:Pfam-A.hmm|PF00133.22 evalue:7.2e-27 score:93.1 best_domain_score:47.9 name:tRNA-synt_1; db:Pfam-A.hmm|PF01406.19 evalue:6.4e-12 score:44.7 best_domain_score:28.0 name:tRNA-synt_1e; db:Pfam-A.hmm|PF09334.11 evalue:1.1e-97 score:326.5 best_domain_score:170.7 name:tRNA-synt_1g;
sprot_desc Methionine--tRNA ligase;
sprot_id sp|P23920|SYM_GEOSE;
sprot_target db:uniprot_sprot|sp|P23920|SYM_GEOSE 8 522 evalue:1.2e-118 qcov:98.50 identity:41.60;
tigrfam_acc TIGR00398;
tigrfam_desc methionine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name metG;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00398 evalue:2.3e-137 score:458.0 best_domain_score:450.5 name:TIGR00398;
68224 69153 CDS
ID metaerg.pl|09869
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002724575;
genomedb_acc GCA_002724575.1;
genomedb_target db:genomedb|GCA_002724575.1|MBO76186.1 1 304 evalue:2.3e-78 qcov:98.40 identity:52.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:8e-34 score:115.0 best_domain_score:114.5 name:Peptidase_M23;
tm_num 1;
68224 69153 transmembrane_helix
ID metaerg.pl|09870
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i68305-68373o;
69770 70471 CDS
ID metaerg.pl|09871
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
70468 71856 CDS
ID metaerg.pl|09872
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04661.1 54 456 evalue:3.3e-28 qcov:87.20 identity:26.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
sp YES;
tm_num 1;
70468 70581 signal_peptide
ID metaerg.pl|09873
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
70468 71856 transmembrane_helix
ID metaerg.pl|09874
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i70504-70572o;
71951 72727 CDS
ID metaerg.pl|09875
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002501085;
genomedb_acc GCA_002501085.1;
genomedb_target db:genomedb|GCA_002501085.1|DLRL01000023.1_17 1 255 evalue:7.6e-51 qcov:98.80 identity:45.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
sp YES;
71951 72004 lipoprotein_signal_peptide
ID metaerg.pl|09876
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
72849 75026 CDS
ID metaerg.pl|09877
allec_ids 4.2.1.17; 5.1.2.3; 1.1.1.35;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0005737; GO:0008692; GO:0004300; GO:0051287; GO:0006635;
allko_ids K07511; K07515; K01825; K13247; K10527; K07514; K13767; K13816; K05556; K15016; K01782; K07516; K00022; K01692;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000052.1_15 6 720 evalue:7.4e-245 qcov:98.60 identity:61.20;
kegg_pathway_id 00640; 00650; 01057; 00071; 00410; 00592; 01040; 00903; 00062; 00930; 00632; 00380; 00310; 00280; 00281;
kegg_pathway_name Propanoate metabolism; Butanoate metabolism; Biosynthesis of type II polyketide products; Fatty acid metabolism; beta-Alanine metabolism; alpha-Linolenic acid metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Caprolactam degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id CENTFERM-PWY; PWY-6435; PWY-5789; PWY-5184; PWY-561; P3-PWY; PWY-5138; TRYPTOPHAN-DEGRADATION-1; VALDEG-PWY; FAO-PWY; ILEUDEG-PWY; GLUDEG-II-PWY; PWY-5136; PWY-5177;
metacyc_pathway_name pyruvate fermentation to butanoate;; 4-hydroxybenzoate biosynthesis III (plants);; 3-hydroxypropanoate/4-hydroxybutanate cycle;; toluene degradation VI (anaerobic);; superpathway of glyoxylate cycle and fatty acid degradation;; gallate degradation III (anaerobic);; unsaturated, even numbered fatty acid β-oxidation;; L-tryptophan degradation III (eukaryotic);; L-valine degradation I;; fatty acid β-oxidation I;; L-isoleucine degradation I;; L-glutamate degradation VII (to butanoate);; fatty acid β-oxidation II (peroxisome);; glutaryl-CoA degradation;;
metacyc_pathway_type Acetyl-CoA-Butyrate; Pyruvate-Degradation;; 4-Hydroxybenzoate-Biosynthesis;; Autotrophic-CO2-Fixation;; Super-Pathways; TOLUENE-DEG;; Energy-Metabolism; Super-Pathways;; GALLATE-DEG;; Fatty-Acid-Degradation;; Super-Pathways; TRYPTOPHAN-DEG;; VALINE-DEG;; Fatty-Acid-Degradation;; ISOLEUCINE-DEG;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Fatty-Acid-Degradation;; CARBOXYLATES-DEG;;
pfam_acc PF00725; PF02737; PF00378; PF16113;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id 3HCDH; 3HCDH_N; ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00725.22 evalue:2.4e-35 score:120.3 best_domain_score:88.0 name:3HCDH; db:Pfam-A.hmm|PF02737.18 evalue:5.3e-58 score:195.1 best_domain_score:194.4 name:3HCDH_N; db:Pfam-A.hmm|PF00378.20 evalue:2.3e-32 score:111.5 best_domain_score:110.7 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:3.8e-23 score:81.7 best_domain_score:81.0 name:ECH_2;
sprot_desc Fatty acid oxidation complex subunit alpha;
sprot_id sp|A3QFP3|FADJ_SHELP;
sprot_target db:uniprot_sprot|sp|A3QFP3|FADJ_SHELP 15 718 evalue:2.3e-144 qcov:97.10 identity:41.00;
75023 75658 CDS
ID metaerg.pl|09878
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000001.1_21 22 203 evalue:1.5e-28 qcov:86.30 identity:43.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF12804;
pfam_desc MobA-like NTP transferase domain;
pfam_id NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF12804.7 evalue:2.2e-29 score:102.1 best_domain_score:101.8 name:NTP_transf_3;
75652 76530 CDS
ID metaerg.pl|09879
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000082.1_94 6 286 evalue:4.6e-60 qcov:96.20 identity:49.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF13478;
pfam_desc XdhC Rossmann domain;
pfam_id XdhC_C;
pfam_target db:Pfam-A.hmm|PF13478.6 evalue:2.1e-38 score:130.9 best_domain_score:130.4 name:XdhC_C;
76517 76846 CDS
ID metaerg.pl|09880
allko_ids K07402;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000002.1_64 18 109 evalue:7.7e-21 qcov:84.40 identity:64.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF02625;
pfam_desc XdhC and CoxI family;
pfam_id XdhC_CoxI;
pfam_target db:Pfam-A.hmm|PF02625.16 evalue:3.8e-23 score:80.7 best_domain_score:80.2 name:XdhC_CoxI;
76861 77430 CDS
ID metaerg.pl|09881
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000052.1_12 5 182 evalue:2.2e-47 qcov:94.20 identity:53.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF04167;
pfam_desc Protein of unknown function (DUF402);
pfam_id DUF402;
pfam_target db:Pfam-A.hmm|PF04167.13 evalue:2.8e-16 score:58.7 best_domain_score:57.9 name:DUF402;
78472 77636 CDS
ID metaerg.pl|09882
allgo_ids GO:0015035;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD49172.1 26 241 evalue:3.2e-47 qcov:77.70 identity:44.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF01323; PF13462;
pfam_desc DSBA-like thioredoxin domain; Thioredoxin;
pfam_id DSBA; Thioredoxin_4;
pfam_target db:Pfam-A.hmm|PF01323.20 evalue:6.2e-13 score:48.2 best_domain_score:47.2 name:DSBA; db:Pfam-A.hmm|PF13462.6 evalue:1.6e-29 score:102.4 best_domain_score:102.0 name:Thioredoxin_4;
tm_num 1;
78472 77636 transmembrane_helix
ID metaerg.pl|09883
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i77696-77764o;
79208 78498 CDS
ID metaerg.pl|09884
allko_ids K01079;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000052.1_6 1 235 evalue:1.8e-67 qcov:99.60 identity:59.60;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF12710; PF13419; PF13242;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD; HAD_2; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:2.9e-10 score:40.1 best_domain_score:39.5 name:HAD; db:Pfam-A.hmm|PF13419.6 evalue:5.8e-09 score:35.5 best_domain_score:32.6 name:HAD_2; db:Pfam-A.hmm|PF13242.6 evalue:9.8e-11 score:40.8 best_domain_score:39.6 name:Hydrolase_like;
80295 79270 CDS
ID metaerg.pl|09885
allec_ids 4.3.1.17;
allgo_ids GO:0005524; GO:0008721; GO:0003941; GO:0000287; GO:0042803; GO:0030170; GO:0030378; GO:0018114; GO:0070179; GO:0070178; GO:0006563; GO:0042866;
allko_ids K10150; K01738; K01697; K01733; K13034; K01754; K12339; K12235;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002313925;
genomedb_acc GCA_002313925.1;
genomedb_target db:genomedb|GCA_002313925.1|DCAZ01000128.1_5 25 338 evalue:5.5e-97 qcov:92.10 identity:61.80;
kegg_pathway_id 00290; 00450; 00920; 00271; 00750; 00272; 00260;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Selenoamino acid metabolism; Sulfur metabolism; Methionine metabolism; Vitamin B6 metabolism; Cysteine metabolism; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
metacyc_pathway_id PWY-5497; SERDEG-PWY; PWY-3661;
metacyc_pathway_name purine nucleobases degradation II (anaerobic);; L-serine degradation;; glycine betaine degradation I;;
metacyc_pathway_type Fermentation; Purine-Degradation;; SERINE-DEG;; Glycine-Betaine-Degradation;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:4.4e-76 score:255.3 best_domain_score:255.1 name:PALP;
sprot_desc Serine racemase;
sprot_id sp|O59791|SRR_SCHPO;
sprot_target db:uniprot_sprot|sp|O59791|SRR_SCHPO 27 333 evalue:1.5e-56 qcov:90.00 identity:39.70;
82913 80292 CDS
ID metaerg.pl|09886
allec_ids 5.6.2.3; 5.99.1.3;
allgo_ids GO:0003677; GO:0003916; GO:0005524; GO:0005694; GO:0006265; GO:0005737; GO:0003918; GO:0006261;
allko_ids K02469;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002724575;
genomedb_acc GCA_002724575.1;
genomedb_target db:genomedb|GCA_002724575.1|MBO76198.1 17 845 evalue:0.0e+00 qcov:95.00 identity:73.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
pfam_acc PF03989; PF00521;
pfam_desc DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A;
pfam_id DNA_gyraseA_C; DNA_topoisoIV;
pfam_target db:Pfam-A.hmm|PF03989.13 evalue:2.3e-73 score:240.7 best_domain_score:48.7 name:DNA_gyraseA_C; db:Pfam-A.hmm|PF00521.20 evalue:3.1e-155 score:516.5 best_domain_score:516.1 name:DNA_topoisoIV;
sprot_desc DNA gyrase subunit A;
sprot_id sp|O50628|GYRA_BACHD;
sprot_target db:uniprot_sprot|sp|O50628|GYRA_BACHD 25 821 evalue:6.1e-232 qcov:91.30 identity:57.30;
tigrfam_acc TIGR01063;
tigrfam_desc DNA gyrase, A subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name gyrA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01063 evalue:0 score:1182.2 best_domain_score:1182.0 name:TIGR01063;
83711 83061 CDS
ID metaerg.pl|09887
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Longimonas;s__Longimonas halophila;
genomedb_acc GCF_002554705.1;
genomedb_target db:genomedb|GCF_002554705.1|WP_098061498.1 36 214 evalue:4.3e-47 qcov:82.90 identity:52.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
sp YES;
tm_num 1;
83061 83147 lipoprotein_signal_peptide
ID metaerg.pl|09888
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
83711 83061 transmembrane_helix
ID metaerg.pl|09889
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
topology i83079-83147o;
84248 83895 CDS
ID metaerg.pl|09890
allgo_ids GO:0005737; GO:0005524; GO:0003677; GO:0004518; GO:0006281; GO:0009432;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA7887;f__GCA-2721365;g__GCA-2721365;s__GCA-2721365 sp002721365;
genomedb_acc GCA_002721365.1;
genomedb_target db:genomedb|GCA_002721365.1|MBL29309.1 12 111 evalue:3.7e-29 qcov:85.50 identity:65.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.53461; 11.9445; ; 0.01044; 13.4896;
sprot_desc UvrABC system protein A;
sprot_id sp|P29927|UVRA_PARDE;
sprot_target db:uniprot_sprot|sp|P29927|UVRA_PARDE 12 111 evalue:6.4e-28 qcov:85.50 identity:63.00;
>Feature NODE_71_length_84049_cov_6.95959
121 1374 CDS
ID metaerg.pl|09891
allko_ids K00443; K00122; K00226; K00125; K00441; K21231;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium;s__Mesorhizobium loti_B;
genomedb_acc GCF_000517145.1;
genomedb_target db:genomedb|GCF_000517145.1|WP_027033722.1 16 417 evalue:7.2e-176 qcov:96.40 identity:72.10;
kegg_pathway_id 00790; 00680; 00630; 00240;
kegg_pathway_name Folate biosynthesis; Methane metabolism; Glyoxylate and dicarboxylate metabolism; Pyrimidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF04432; PF04422;
pfam_desc Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term;
pfam_id FrhB_FdhB_C; FrhB_FdhB_N;
pfam_target db:Pfam-A.hmm|PF04432.13 evalue:6.7e-32 score:109.7 best_domain_score:109.1 name:FrhB_FdhB_C; db:Pfam-A.hmm|PF04422.13 evalue:9.4e-20 score:69.8 best_domain_score:69.2 name:FrhB_FdhB_N;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P46015|Y1601_NOSS1;
sprot_target db:uniprot_sprot|sp|P46015|Y1601_NOSS1 29 397 evalue:7.3e-66 qcov:88.50 identity:37.30;
121 183 signal_peptide
ID metaerg.pl|09892
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
1371 2561 CDS
ID metaerg.pl|09893
allec_ids 1.3.1.83; 1.3.1.-;
allgo_ids GO:0071949; GO:0102067; GO:0045550; GO:0036070; GO:0015979;
allko_ids K10960;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatimonas;s__Gemmatimonas sp002737115;
genomedb_acc GCA_002737115.1;
genomedb_target db:genomedb|GCA_002737115.1|PHX65758.1 5 393 evalue:9.3e-157 qcov:98.20 identity:68.50;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id PWY-5064; PWY-5063; PWY-5863; HCAMHPDEG-PWY; PWY-3481; PWY-5393; PWY-6088; PWY1A0-6325; PWY-3461; PWY-5972; PWY-5466; PWY5F9-3233; PWY-5729; PWY-5367;
metacyc_pathway_name chlorophyll a biosynthesis II;; phytyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; raspberry ketone biosynthesis;; 3-chlorobenzoate degradation I (via chlorocatechol);; actinorhodin biosynthesis;; L-tyrosine biosynthesis II;; stearate biosynthesis I (animals and fungi);; matairesinol biosynthesis;; phthalate degradation (aerobic);; vestitol and sativan biosynthesis;; petroselinate biosynthesis;;
metacyc_pathway_type Chlorophyll-a-Biosynthesis;; Phytyl-Diphosphate-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Phenolic-Compounds-Degradation;; Amino-Acid-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; 3-Chlorobenzoate-Degradation;; Antibiotic-Biosynthesis;; TYROSINE-SYN;; Stearate-Biosynthesis;; LIGNAN-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;; ISOFLAVONOID-SYN;; Unsaturated-Fatty-Acids-Biosynthesis;;
pfam_acc PF00890; PF01494; PF05834; PF13450; PF07992; PF04820;
pfam_desc FAD binding domain; FAD binding domain; Lycopene cyclase protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Tryptophan halogenase;
pfam_id FAD_binding_2; FAD_binding_3; Lycopene_cycl; NAD_binding_8; Pyr_redox_2; Trp_halogenase;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:5.6e-05 score:21.6 best_domain_score:20.3 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:8.4e-15 score:54.1 best_domain_score:31.2 name:FAD_binding_3; db:Pfam-A.hmm|PF05834.12 evalue:7.9e-10 score:37.6 best_domain_score:33.0 name:Lycopene_cycl; db:Pfam-A.hmm|PF13450.6 evalue:2.7e-07 score:29.9 best_domain_score:28.3 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:2.6e-06 score:26.1 best_domain_score:25.8 name:Pyr_redox_2; db:Pfam-A.hmm|PF04820.14 evalue:9.2e-05 score:20.7 best_domain_score:8.4 name:Trp_halogenase;
sprot_desc Geranylgeranyl diphosphate reductase;
sprot_id sp|P26172|BCHP_RHOCB;
sprot_target db:uniprot_sprot|sp|P26172|BCHP_RHOCB 4 395 evalue:5.9e-118 qcov:99.00 identity:54.60;
tigrfam_acc TIGR02023; TIGR02032;
tigrfam_desc geranylgeranyl reductase; geranylgeranyl reductase family;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name BchP-ChlP; GG-red-SF;
tigrfam_sub1role Chlorophyll and bacteriochlorphyll; Chlorophyll and bacteriochlorphyll;
tigrfam_target db:TIGRFAMs.hmm|TIGR02023 evalue:6e-146 score:485.5 best_domain_score:485.3 name:TIGR02023; db:TIGRFAMs.hmm|TIGR02032 evalue:9.3e-74 score:247.9 best_domain_score:247.6 name:TIGR02032;
tm_num 1;
1371 2561 transmembrane_helix
ID metaerg.pl|09894
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i2331-2390o;
2558 3487 CDS
ID metaerg.pl|09895
allec_ids 2.5.1.10;
allgo_ids GO:0008299; GO:0005737; GO:0004337; GO:0046872;
genomedb_OC d__Bacteria;p__Firmicutes_D;c__Proteinivoracia;o__UBA4975;f__UBA4975;g__UBA4975;s__UBA4975 sp002397155;
genomedb_acc GCA_002397155.1;
genomedb_target db:genomedb|GCA_002397155.1|DGZR01000019.1_6 18 256 evalue:2.2e-28 qcov:77.30 identity:40.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id PWY-5123; PWY-5121; PWY-5910; POLYISOPRENSYN-PWY; PWY-6146;
metacyc_pathway_name trans, trans-farnesyl diphosphate biosynthesis;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; polyisoprenoid biosynthesis (E. coli);; Methanobacterium thermoautotrophicum biosynthetic metabolism;;
metacyc_pathway_type All-Trans-Farnesyl-PP-Biosynthesis;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis; Super-Pathways;; Biosynthesis; Super-Pathways;;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:3.4e-27 score:94.4 best_domain_score:93.8 name:polyprenyl_synt;
sprot_desc Farnesyl diphosphate synthase;
sprot_id sp|Q08291|ISPA_GEOSE;
sprot_target db:uniprot_sprot|sp|Q08291|ISPA_GEOSE 18 236 evalue:9.3e-18 qcov:70.90 identity:35.20;
3484 4770 CDS
ID metaerg.pl|09896
allec_ids 1.2.1.70;
allgo_ids GO:0008883; GO:0033014; GO:0050661; GO:0055114; GO:0006782;
allko_ids K02492;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatimonas;s__Gemmatimonas sp002331565;
genomedb_acc GCA_002331565.1;
genomedb_target db:genomedb|GCA_002331565.1|DCZC01000241.1_1 9 415 evalue:1.5e-64 qcov:95.10 identity:39.40;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id PWY-5918; PWY-5188;
metacyc_pathway_name superpathay of heme b biosynthesis from glutamate;; tetrapyrrole biosynthesis I (from glutamate);;
metacyc_pathway_type Heme-b-Biosynthesis; Super-Pathways;; Tetrapyrrole-Biosynthesis;;
pfam_acc PF00745; PF05201; PF01488;
pfam_desc Glutamyl-tRNAGlu reductase, dimerisation domain; Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase;
pfam_id GlutR_dimer; GlutR_N; Shikimate_DH;
pfam_target db:Pfam-A.hmm|PF00745.20 evalue:1.1e-10 score:41.0 best_domain_score:39.9 name:GlutR_dimer; db:Pfam-A.hmm|PF05201.15 evalue:1.5e-34 score:118.1 best_domain_score:117.3 name:GlutR_N; db:Pfam-A.hmm|PF01488.20 evalue:6.7e-20 score:70.8 best_domain_score:69.9 name:Shikimate_DH;
sprot_desc Glutamyl-tRNA reductase;
sprot_id sp|Q5SI68|HEM1_THET8;
sprot_target db:uniprot_sprot|sp|Q5SI68|HEM1_THET8 9 351 evalue:1.3e-38 qcov:80.10 identity:34.80;
tigrfam_acc TIGR01035;
tigrfam_desc glutamyl-tRNA reductase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemA;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01035 evalue:1.9e-70 score:237.0 best_domain_score:236.8 name:TIGR01035;
4773 5888 CDS
ID metaerg.pl|09897
allec_ids 1.3.3.3;
allgo_ids GO:0004109; GO:0006779; GO:0055114; GO:0005737; GO:0046872; GO:0042803; GO:0015995; GO:0006782;
allko_ids K00228;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatimonas;s__Gemmatimonas sp002483225;
genomedb_acc GCA_002483225.1;
genomedb_target db:genomedb|GCA_002483225.1|DLHL01000027.1_48 54 359 evalue:8.3e-107 qcov:82.50 identity:62.20;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id PWY-5529; PWY-5531; PWY0-1415; HEME-BIOSYNTHESIS-II; PWY-5920; CHLOROPHYLL-SYN; PWY-5918;
metacyc_pathway_name superpathway of bacteriochlorophyll a biosynthesis;; 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; superpathway of heme b biosynthesis from uroporphyrinogen-III;; heme b biosynthesis I (aerobic);; superpathway of b heme biosynthesis from glycine;; 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);; superpathay of heme b biosynthesis from glutamate;;
metacyc_pathway_type Chlorophyll-a-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF01218;
pfam_desc Coproporphyrinogen III oxidase;
pfam_id Coprogen_oxidas;
pfam_target db:Pfam-A.hmm|PF01218.18 evalue:5.4e-115 score:382.4 best_domain_score:382.2 name:Coprogen_oxidas;
sprot_desc Oxygen-dependent coproporphyrinogen-III oxidase;
sprot_id sp|Q5N3S5|HEM6_SYNP6;
sprot_target db:uniprot_sprot|sp|Q5N3S5|HEM6_SYNP6 54 360 evalue:4.9e-82 qcov:82.70 identity:50.20;
5896 8640 CDS
ID metaerg.pl|09898
allec_ids 2.7.9.2;
allgo_ids GO:0016310; GO:0016772; GO:0005524; GO:0046872; GO:0008986; GO:0006094; GO:0006090;
allko_ids K08484; K02768; K00873; K08483; K02806; K02812; K02821; K01006; K01007; K11183; K02793; K02744; K11189; K02794; K11201;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000321.1_70 20 909 evalue:0.0e+00 qcov:97.40 identity:64.00;
kegg_pathway_id 00230; 02060; 00720; 00620; 00710; 00010;
kegg_pathway_name Purine metabolism; Phosphotransferase system (PTS); Reductive carboxylate cycle (CO2 fixation); Pyruvate metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id GLYCOLYSIS-TCA-GLYOX-BYPASS; P23-PWY; ANAEROFRUCAT-PWY; P441-PWY; GLUCONEO-PWY; GLYCOLYSIS; P461-PWY; PWY-5484; GLYCOLYSIS-E-D;
metacyc_pathway_name superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; reductive TCA cycle I;; homolactic fermentation;; superpathway of N-acetylneuraminate degradation;; gluconeogenesis I;; glycolysis I (from glucose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Fermentation-to-Lactate; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; Gluconeogenesis;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00391; PF02896; PF01326;
pfam_desc PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain;
pfam_id PEP-utilizers; PEP-utilizers_C; PPDK_N;
pfam_target db:Pfam-A.hmm|PF00391.23 evalue:1.1e-19 score:69.1 best_domain_score:67.9 name:PEP-utilizers; db:Pfam-A.hmm|PF02896.18 evalue:2.2e-46 score:157.6 best_domain_score:156.6 name:PEP-utilizers_C; db:Pfam-A.hmm|PF01326.19 evalue:3.3e-87 score:292.0 best_domain_score:290.8 name:PPDK_N;
sprot_desc Phosphoenolpyruvate synthase;
sprot_id sp|Q55905|PPSA_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55905|PPSA_SYNY3 22 905 evalue:2.5e-183 qcov:96.70 identity:43.30;
tigrfam_acc TIGR01418;
tigrfam_desc phosphoenolpyruvate synthase;
tigrfam_mainrole Energy metabolism;
tigrfam_name PEP_synth;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01418 evalue:3.7e-246 score:818.4 best_domain_score:451.5 name:TIGR01418;
10593 8620 CDS
ID metaerg.pl|09899
allgo_ids GO:0008299;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000237.1_28 5 623 evalue:2.7e-137 qcov:94.20 identity:46.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00348; PF00494;
pfam_desc Polyprenyl synthetase; Squalene/phytoene synthase;
pfam_id polyprenyl_synt; SQS_PSY;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:3.4e-37 score:127.1 best_domain_score:126.3 name:polyprenyl_synt; db:Pfam-A.hmm|PF00494.19 evalue:1.2e-55 score:188.1 best_domain_score:187.4 name:SQS_PSY;
11453 10590 CDS
ID metaerg.pl|09900
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000059.1_16 16 274 evalue:4.2e-66 qcov:90.20 identity:51.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF04240;
pfam_desc Carotenoid biosynthesis protein;
pfam_id Caroten_synth;
pfam_target db:Pfam-A.hmm|PF04240.12 evalue:6.1e-48 score:162.7 best_domain_score:162.1 name:Caroten_synth;
tm_num 7;
11453 10590 transmembrane_helix
ID metaerg.pl|09901
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i10626-10694o10752-10820i10839-10907o10950-11009i11028-11096o11169-11237i11271-11339o;
12412 11450 CDS
ID metaerg.pl|09902
allgo_ids GO:0031419; GO:0046872;
allko_ids K00548; K01844;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000237.1_26 1 306 evalue:2.4e-78 qcov:95.60 identity:48.20;
kegg_pathway_id 00670; 00271; 00310;
kegg_pathway_name One carbon pool by folate; Methionine metabolism; Lysine degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF02310; PF02607; PF12728; PF00376; PF13411;
pfam_desc B12 binding domain; B12 binding domain; Helix-turn-helix domain; MerR family regulatory protein; MerR HTH family regulatory protein;
pfam_id B12-binding; B12-binding_2; HTH_17; MerR; MerR_1;
pfam_target db:Pfam-A.hmm|PF02310.19 evalue:1e-12 score:47.4 best_domain_score:46.7 name:B12-binding; db:Pfam-A.hmm|PF02607.17 evalue:1.1e-06 score:28.2 best_domain_score:27.6 name:B12-binding_2; db:Pfam-A.hmm|PF12728.7 evalue:7.1e-12 score:44.6 best_domain_score:43.0 name:HTH_17; db:Pfam-A.hmm|PF00376.23 evalue:2.4e-07 score:29.7 best_domain_score:28.8 name:MerR; db:Pfam-A.hmm|PF13411.6 evalue:3e-05 score:23.3 best_domain_score:22.5 name:MerR_1;
tigrfam_acc TIGR01764;
tigrfam_desc DNA binding domain, excisionase family;
tigrfam_mainrole Unknown function;
tigrfam_name excise;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR01764 evalue:4.8e-12 score:45.2 best_domain_score:44.2 name:TIGR01764;
13989 12559 CDS
ID metaerg.pl|09903
allgo_ids GO:0003824; GO:0050662; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Thermaceae;g__Thermus;s__Thermus brockianus;
genomedb_acc GCF_001880325.1;
genomedb_target db:genomedb|GCF_001880325.1|WP_071678007.1 1 473 evalue:1.8e-170 qcov:99.40 identity:64.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF11066; PF01370; PF13460; PF05368;
pfam_desc Protein of unknown function (DUF2867); NAD dependent epimerase/dehydratase family; NAD(P)H-binding ; NmrA-like family;
pfam_id DUF2867; Epimerase; NAD_binding_10; NmrA;
pfam_target db:Pfam-A.hmm|PF11066.8 evalue:1.2e-27 score:96.3 best_domain_score:96.0 name:DUF2867; db:Pfam-A.hmm|PF01370.21 evalue:3.3e-10 score:39.1 best_domain_score:38.1 name:Epimerase; db:Pfam-A.hmm|PF13460.6 evalue:1.1e-12 score:47.4 best_domain_score:46.8 name:NAD_binding_10; db:Pfam-A.hmm|PF05368.13 evalue:7.5e-10 score:38.0 best_domain_score:36.2 name:NmrA;
sprot_desc Putative NAD(P)-binding protein YbjT;
sprot_id sp|P75822|YBJT_ECOLI;
sprot_target db:uniprot_sprot|sp|P75822|YBJT_ECOLI 2 468 evalue:9.5e-62 qcov:98.10 identity:32.30;
15751 14081 CDS
ID metaerg.pl|09904
allec_ids 3.6.1.1;
allgo_ids GO:0005737; GO:0016462; GO:0016208; GO:0050897; GO:0004427; GO:0030145; GO:0006796;
allko_ids K01697; K00088; K05847; K15986;
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Opitutaceae;g__EW11;s__EW11 sp003054665;
genomedb_acc GCF_003054665.1;
genomedb_target db:genomedb|GCF_003054665.1|WP_107742854.1 2 555 evalue:2.4e-166 qcov:99.60 identity:53.60;
kegg_pathway_id 00450; 00271; 00983; 02010; 00230; 00260;
kegg_pathway_name Selenoamino acid metabolism; Methionine metabolism; Drug metabolism - other enzymes; ABC transporters - General; Purine metabolism; Glycine, serine and threonine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00571; PF01368; PF02833; PF07085;
pfam_desc CBS domain; DHH family; DHHA2 domain; DRTGG domain;
pfam_id CBS; DHH; DHHA2; DRTGG;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:4.8e-11 score:42.2 best_domain_score:24.1 name:CBS; db:Pfam-A.hmm|PF01368.20 evalue:1.9e-27 score:94.7 best_domain_score:93.9 name:DHH; db:Pfam-A.hmm|PF02833.14 evalue:9.3e-16 score:57.5 best_domain_score:54.2 name:DHHA2; db:Pfam-A.hmm|PF07085.12 evalue:1.1e-20 score:72.6 best_domain_score:71.4 name:DRTGG;
sprot_desc Cobalt-dependent inorganic pyrophosphatase;
sprot_id sp|Q8XIQ9|IPYR_CLOPE;
sprot_target db:uniprot_sprot|sp|Q8XIQ9|IPYR_CLOPE 6 549 evalue:1.1e-77 qcov:97.80 identity:32.70;
16802 15759 CDS
ID metaerg.pl|09905
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__MEBICO9517;g__MEBICO9517;s__MEBICO9517 sp003285105;
genomedb_acc GCA_003285105.1;
genomedb_target db:genomedb|GCA_003285105.1|CP030158.1_728 75 343 evalue:6.2e-72 qcov:77.50 identity:49.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF04187;
pfam_desc Haem-binding uptake, Tiki superfamily, ChaN;
pfam_id Cofac_haem_bdg;
pfam_target db:Pfam-A.hmm|PF04187.13 evalue:5.5e-53 score:179.3 best_domain_score:179.0 name:Cofac_haem_bdg;
sp YES;
15759 15851 lipoprotein_signal_peptide
ID metaerg.pl|09906
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
18750 16807 CDS
ID metaerg.pl|09907
allec_ids 5.6.2.3; 5.99.1.3;
allgo_ids GO:0003677; GO:0003918; GO:0005524; GO:0006265; GO:0005694; GO:0005737; GO:0046872; GO:0006261;
allko_ids K02470;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000054.1_24 11 647 evalue:4.7e-291 qcov:98.50 identity:77.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00204; PF00986; PF02518; PF01751;
pfam_desc DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Toprim domain;
pfam_id DNA_gyraseB; DNA_gyraseB_C; HATPase_c; Toprim;
pfam_target db:Pfam-A.hmm|PF00204.25 evalue:1.5e-61 score:206.1 best_domain_score:205.5 name:DNA_gyraseB; db:Pfam-A.hmm|PF00986.21 evalue:1.6e-30 score:104.3 best_domain_score:103.3 name:DNA_gyraseB_C; db:Pfam-A.hmm|PF02518.26 evalue:8.5e-22 score:77.0 best_domain_score:75.8 name:HATPase_c; db:Pfam-A.hmm|PF01751.22 evalue:3.9e-18 score:64.8 best_domain_score:63.9 name:Toprim;
sprot_desc DNA gyrase subunit B;
sprot_id sp|O50627|GYRB_BACHD;
sprot_target db:uniprot_sprot|sp|O50627|GYRB_BACHD 13 647 evalue:2.6e-232 qcov:98.10 identity:62.90;
tigrfam_acc TIGR01059;
tigrfam_desc DNA gyrase, B subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name gyrB;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01059 evalue:8e-299 score:991.7 best_domain_score:991.6 name:TIGR01059;
19243 18863 CDS
ID metaerg.pl|09908
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04932.1 13 109 evalue:1.2e-17 qcov:77.00 identity:45.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF05258;
pfam_desc Dna[CI] antecedent, DciA;
pfam_id DciA;
pfam_target db:Pfam-A.hmm|PF05258.12 evalue:1.2e-20 score:73.0 best_domain_score:72.8 name:DciA;
20406 19240 CDS
ID metaerg.pl|09909
allgo_ids GO:0005524; GO:0005737; GO:0003697; GO:0006281; GO:0006260; GO:0009432;
allko_ids K03629;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000022.1_48 2 377 evalue:3.5e-92 qcov:96.90 identity:51.60;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF13304; PF02463;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; RecF/RecN/SMC N terminal domain;
pfam_id AAA_21; SMC_N;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1e-13 score:51.0 best_domain_score:26.4 name:AAA_21; db:Pfam-A.hmm|PF02463.19 evalue:1.1e-14 score:53.7 best_domain_score:49.6 name:SMC_N;
sprot_desc DNA replication and repair protein RecF;
sprot_id sp|Q2S6G1|RECF_SALRD;
sprot_target db:uniprot_sprot|sp|Q2S6G1|RECF_SALRD 1 357 evalue:2.5e-44 qcov:92.00 identity:34.10;
tigrfam_acc TIGR00611;
tigrfam_desc DNA replication and repair protein RecF;
tigrfam_mainrole DNA metabolism;
tigrfam_name recf;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00611 evalue:1.5e-71 score:240.6 best_domain_score:240.3 name:TIGR00611;
21232 20456 CDS
ID metaerg.pl|09910
allec_ids 4.2.1.150;
allgo_ids GO:0003824; GO:0016829; GO:0019605;
allko_ids K07516; K01715; K01782; K01692; K00022; K13767; K15016; K13816; K07514; K07511; K01825; K10527; K07515;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000054.1_21 1 258 evalue:1.5e-94 qcov:100.00 identity:68.60;
kegg_pathway_id 00062; 00903; 01040; 00592; 00410; 00071; 00650; 00640; 00280; 00281; 00310; 00380; 00930; 00632;
kegg_pathway_name Fatty acid elongation in mitochondria; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Butanoate metabolism; Propanoate metabolism; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:2.5e-72 score:242.4 best_domain_score:242.3 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:6.5e-43 score:146.7 best_domain_score:134.1 name:ECH_2;
sprot_desc Short-chain-enoyl-CoA hydratase;
sprot_id sp|P52046|CRT_CLOAB;
sprot_target db:uniprot_sprot|sp|P52046|CRT_CLOAB 1 254 evalue:3.6e-63 qcov:98.40 identity:49.60;
21533 21970 CDS
ID metaerg.pl|09911
allgo_ids GO:0003697;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000007.1_50 1 145 evalue:1.9e-51 qcov:100.00 identity:72.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00436;
pfam_desc Single-strand binding protein family;
pfam_id SSB;
pfam_target db:Pfam-A.hmm|PF00436.25 evalue:4.6e-37 score:125.5 best_domain_score:125.3 name:SSB;
tigrfam_acc TIGR00621;
tigrfam_desc single-stranded DNA-binding protein;
tigrfam_mainrole DNA metabolism;
tigrfam_name ssb;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00621 evalue:1.2e-41 score:141.9 best_domain_score:141.3 name:TIGR00621;
22635 22381 CDS
ID metaerg.pl|09912
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000021.1_41 1 79 evalue:1.0e-12 qcov:94.00 identity:50.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
23072 22866 CDS
ID metaerg.pl|09913
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000007.1_48 1 62 evalue:4.2e-17 qcov:91.20 identity:71.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
23523 24275 CDS
ID metaerg.pl|09914
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
25033 24098 CDS
ID metaerg.pl|09915
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000022.1_41 22 288 evalue:7.3e-40 qcov:85.90 identity:38.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
25483 26163 CDS
ID metaerg.pl|09916
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000022.1_40 7 225 evalue:2.5e-66 qcov:96.90 identity:59.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
26239 26475 CDS
ID metaerg.pl|09917
allgo_ids GO:0003735; GO:0005840; GO:0006412;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000001.1_122 12 77 evalue:5.7e-18 qcov:84.60 identity:83.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF01165;
pfam_desc Ribosomal protein S21;
pfam_id Ribosomal_S21;
pfam_target db:Pfam-A.hmm|PF01165.20 evalue:3e-22 score:77.3 best_domain_score:77.3 name:Ribosomal_S21;
tigrfam_acc TIGR00030;
tigrfam_desc ribosomal protein bS21;
tigrfam_mainrole Protein synthesis;
tigrfam_name S21p;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00030 evalue:5.2e-20 score:70.2 best_domain_score:69.9 name:TIGR00030;
27502 26618 CDS
ID metaerg.pl|09918
allec_ids 1.1.1.157;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0008691; GO:0070403; GO:0019605;
allko_ids K01825; K10527; K13247; K07515; K07511; K07514; K15016; K13816; K05556; K01692; K00022; K01782; K07516; K00074;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000054.1_13 5 294 evalue:2.2e-115 qcov:98.60 identity:72.40;
kegg_pathway_id 00280; 00281; 00310; 00380; 00930; 00632; 01040; 00062; 00903; 00640; 00650; 00410; 00592; 01057; 00071;
kegg_pathway_name Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation; Biosynthesis of unsaturated fatty acids; Fatty acid elongation in mitochondria; Limonene and pinene degradation; Propanoate metabolism; Butanoate metabolism; beta-Alanine metabolism; alpha-Linolenic acid metabolism; Biosynthesis of type II polyketide products; Fatty acid metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00725; PF02737;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain;
pfam_id 3HCDH; 3HCDH_N;
pfam_target db:Pfam-A.hmm|PF00725.22 evalue:1.1e-33 score:114.9 best_domain_score:112.3 name:3HCDH; db:Pfam-A.hmm|PF02737.18 evalue:3.2e-65 score:218.6 best_domain_score:218.3 name:3HCDH_N;
sp YES;
sprot_desc 3-hydroxybutyryl-CoA dehydrogenase;
sprot_id sp|P9WNP6|FADB2_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WNP6|FADB2_MYCTO 1 284 evalue:1.8e-74 qcov:96.60 identity:51.40;
26618 26698 signal_peptide
ID metaerg.pl|09919
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
28764 27553 CDS
ID metaerg.pl|09920
allec_ids 2.3.1.16;
allgo_ids GO:0016747; GO:0005739; GO:0003985; GO:0003988; GO:0006635; GO:1901029;
allko_ids K07823; K07508; K07513; K07550; K07509; K00632; K00626; K02615;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89268.1 1 400 evalue:1.0e-171 qcov:99.30 identity:75.00;
kegg_pathway_id 01040; 00362; 00620; 00062; 00640; 00650; 00592; 00120; 00632; 00380; 02020; 00072; 00071; 00310; 00281; 00280;
kegg_pathway_name Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation; Pyruvate metabolism; Fatty acid elongation in mitochondria; Propanoate metabolism; Butanoate metabolism; alpha-Linolenic acid metabolism; Bile acid biosynthesis; Benzoate degradation via CoA ligation; Tryptophan metabolism; Two-component system - General; Synthesis and degradation of ketone bodies; Fatty acid metabolism; Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id PWY-5136; PWY-561; PWY-6435; FAO-PWY;
metacyc_pathway_name fatty acid β-oxidation II (peroxisome);; superpathway of glyoxylate cycle and fatty acid degradation;; 4-hydroxybenzoate biosynthesis III (plants);; fatty acid β-oxidation I;;
metacyc_pathway_type Fatty-Acid-Degradation;; Energy-Metabolism; Super-Pathways;; 4-Hydroxybenzoate-Biosynthesis;; Fatty-Acid-Degradation;;
pfam_acc PF02803; PF00108;
pfam_desc Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF02803.18 evalue:1.7e-46 score:156.1 best_domain_score:154.2 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:8e-80 score:267.2 best_domain_score:266.3 name:Thiolase_N;
sprot_desc 3-ketoacyl-CoA thiolase, mitochondrial;
sprot_id sp|Q3T0R7|THIM_BOVIN;
sprot_target db:uniprot_sprot|sp|Q3T0R7|THIM_BOVIN 10 399 evalue:5.5e-119 qcov:96.80 identity:55.90;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:1.5e-131 score:438.0 best_domain_score:437.8 name:TIGR01930;
29995 28913 CDS
ID metaerg.pl|09921
allgo_ids GO:0005737; GO:0044096; GO:0005524; GO:0016887; GO:0043108; GO:0043107;
allko_ids K02669;
genomedb_OC d__Bacteria;p__Deferribacterota;c__Deferribacteres;o__Deferribacterales;f__Deferribacteraceae;g__Deferribacter;s__Deferribacter desulfuricans;
genomedb_acc GCF_000010985.1;
genomedb_target db:genomedb|GCF_000010985.1|WP_013007354.1 1 350 evalue:3.2e-124 qcov:97.20 identity:64.30;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00437;
pfam_desc Type II/IV secretion system protein;
pfam_id T2SSE;
pfam_target db:Pfam-A.hmm|PF00437.20 evalue:9e-43 score:145.5 best_domain_score:145.1 name:T2SSE;
sprot_desc Twitching mobility protein;
sprot_id sp|P24559|PILT_PSEAE;
sprot_target db:uniprot_sprot|sp|P24559|PILT_PSEAE 4 346 evalue:6.9e-105 qcov:95.30 identity:56.30;
tigrfam_acc TIGR01420;
tigrfam_desc twitching motility protein;
tigrfam_mainrole Cellular processes;
tigrfam_name pilT_fam;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR01420 evalue:6.8e-149 score:494.9 best_domain_score:494.7 name:TIGR01420;
31321 30011 CDS
ID metaerg.pl|09922
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169310.1 4 395 evalue:1.2e-40 qcov:89.90 identity:32.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF05157;
pfam_desc Type II secretion system (T2SS), protein E, N-terminal domain;
pfam_id T2SSE_N;
pfam_target db:Pfam-A.hmm|PF05157.15 evalue:3.4e-21 score:74.8 best_domain_score:73.9 name:T2SSE_N;
32404 31334 CDS
ID metaerg.pl|09923
allec_ids 1.1.1.85;
allgo_ids GO:0016616; GO:0055114; GO:0005737; GO:0003862; GO:0000287; GO:0051287; GO:0009098;
allko_ids K10978; K00052;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04948.1 1 344 evalue:4.1e-119 qcov:96.60 identity:61.90;
kegg_pathway_id 00290;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id BRANCHED-CHAIN-AA-SYN-PWY; LEUSYN-PWY;
metacyc_pathway_name superpathway of branched chain amino acid biosynthesis;; L-leucine biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; LEUCINE-SYN;;
pfam_acc PF00180;
pfam_desc Isocitrate/isopropylmalate dehydrogenase;
pfam_id Iso_dh;
pfam_target db:Pfam-A.hmm|PF00180.20 evalue:1.9e-92 score:309.3 best_domain_score:309.1 name:Iso_dh;
sprot_desc 3-isopropylmalate dehydrogenase;
sprot_id sp|Q47SB4|LEU3_THEFY;
sprot_target db:uniprot_sprot|sp|Q47SB4|LEU3_THEFY 3 350 evalue:1.6e-82 qcov:97.80 identity:46.60;
32907 32494 CDS
ID metaerg.pl|09924
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000054.1_9 3 122 evalue:1.2e-13 qcov:87.60 identity:39.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
33748 32984 CDS
ID metaerg.pl|09925
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000022.1_34 1 250 evalue:2.3e-47 qcov:98.40 identity:46.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF12773; PF13240;
pfam_desc Double zinc ribbon; zinc-ribbon domain;
pfam_id DZR; zinc_ribbon_2;
pfam_target db:Pfam-A.hmm|PF12773.7 evalue:5.7e-08 score:31.9 best_domain_score:31.1 name:DZR; db:Pfam-A.hmm|PF13240.6 evalue:1.3e-07 score:30.3 best_domain_score:17.6 name:zinc_ribbon_2;
34925 33816 CDS
ID metaerg.pl|09926
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04951.1 1 367 evalue:3.1e-122 qcov:99.50 identity:59.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00515; PF13414; PF13428; PF13432; PF13431; PF14559; PF07719;
pfam_desc Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_11; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:3.6e-09 score:35.3 best_domain_score:13.2 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:5.9e-13 score:47.5 best_domain_score:21.2 name:TPR_11; db:Pfam-A.hmm|PF13428.6 evalue:2.1e-13 score:49.1 best_domain_score:18.9 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:4.4e-17 score:61.7 best_domain_score:30.3 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:2e-06 score:27.1 best_domain_score:9.2 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:1.7e-14 score:53.3 best_domain_score:22.3 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:1.8e-18 score:64.3 best_domain_score:16.4 name:TPR_2;
35608 35225 CDS
ID metaerg.pl|09927
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
35783 37456 CDS
ID metaerg.pl|09928
allec_ids 3.5.2.9;
allgo_ids GO:0003824; GO:0005737; GO:0005829; GO:0009506; GO:0017168; GO:0005524; GO:0006751; GO:0006749;
allko_ids K01474; K01469;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04955.1 5 531 evalue:2.0e-205 qcov:94.60 identity:67.90;
kegg_pathway_id 00480; 00330;
kegg_pathway_name Glutathione metabolism; Arginine and proline metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id PWY-4041;
metacyc_pathway_name γ-glutamyl cycle;;
metacyc_pathway_type Reductants; Super-Pathways;;
pfam_acc PF02538;
pfam_desc Hydantoinase B/oxoprolinase;
pfam_id Hydantoinase_B;
pfam_target db:Pfam-A.hmm|PF02538.14 evalue:1.3e-186 score:620.3 best_domain_score:620.1 name:Hydantoinase_B;
sprot_desc 5-oxoprolinase;
sprot_id sp|Q9FIZ7|OPLA_ARATH;
sprot_target db:uniprot_sprot|sp|Q9FIZ7|OPLA_ARATH 11 531 evalue:2.2e-94 qcov:93.50 identity:39.40;
37463 37867 CDS
ID metaerg.pl|09929
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000022.1_28 1 133 evalue:4.2e-45 qcov:99.30 identity:62.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
38740 37883 CDS
ID metaerg.pl|09930
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000001.1_140 18 261 evalue:4.2e-74 qcov:85.60 identity:56.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF11306;
pfam_desc Protein of unknown function (DUF3108);
pfam_id DUF3108;
pfam_target db:Pfam-A.hmm|PF11306.8 evalue:1.6e-35 score:122.3 best_domain_score:122.1 name:DUF3108;
sp YES;
tm_num 1;
37883 37975 signal_peptide
ID metaerg.pl|09931
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
38740 37883 transmembrane_helix
ID metaerg.pl|09932
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i37901-37969o;
39489 38737 CDS
ID metaerg.pl|09933
allko_ids K00729; K00721;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04963.1 1 247 evalue:3.1e-65 qcov:98.80 identity:53.80;
kegg_pathway_id 00510;
kegg_pathway_name N-Glycan biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00535;
pfam_desc Glycosyl transferase family 2;
pfam_id Glycos_transf_2;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.6e-19 score:69.6 best_domain_score:69.2 name:Glycos_transf_2;
40528 39515 CDS
ID metaerg.pl|09934
allec_ids 2.3.1.242;
allgo_ids GO:0016021; GO:0016740; GO:0005887; GO:0008951; GO:0036104; GO:0009245; GO:0009103; GO:0009409;
allko_ids K02517; K12974;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002348265;
genomedb_acc GCA_002348265.1;
genomedb_target db:genomedb|GCA_002348265.1|DEAT01000080.1_18 47 321 evalue:1.6e-61 qcov:81.60 identity:46.50;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF03279;
pfam_desc Bacterial lipid A biosynthesis acyltransferase;
pfam_id Lip_A_acyltrans;
pfam_target db:Pfam-A.hmm|PF03279.13 evalue:1.2e-59 score:201.2 best_domain_score:200.9 name:Lip_A_acyltrans;
sprot_desc Lipid A biosynthesis palmitoleoyltransferase;
sprot_id sp|P0ACV2|LPXP_ECOLI;
sprot_target db:uniprot_sprot|sp|P0ACV2|LPXP_ECOLI 47 321 evalue:6.6e-17 qcov:81.60 identity:26.00;
42461 40515 CDS
ID metaerg.pl|09935
allec_ids 7.5.2.6;
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887; GO:0034040;
allko_ids K02023; K02000; K10111; K01995; K02049; K05816; K01996; K02071; K06861; K11072; K02045; K02006; K02052; K05847; K02010; K02017; K11084; K11085;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000022.1_12 27 636 evalue:1.7e-216 qcov:94.10 identity:63.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:1e-46 score:159.1 best_domain_score:158.6 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:5.8e-35 score:120.0 best_domain_score:119.4 name:ABC_tran;
sprot_desc Lipid A export ATP-binding/permease protein MsbA;
sprot_id sp|Q2LVL0|MSBA_SYNAS;
sprot_target db:uniprot_sprot|sp|Q2LVL0|MSBA_SYNAS 25 641 evalue:1.6e-107 qcov:95.20 identity:38.60;
tm_num 5;
42461 40515 transmembrane_helix
ID metaerg.pl|09936
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i40626-40694o40863-40919i41112-41165o41175-41234i41421-41489o;
44026 42458 CDS
ID metaerg.pl|09937
allgo_ids GO:0000160;
allko_ids K11354; K07778; K07768; K02575; K07711; K02478; K07679; K07648; K07651; K07718; K07654; K07682; K03407; K07637; K07646; K07641; K01120; K07673; K07639; K08475; K07652; K07645; K07708; K07677; K07704; K08282; K01937; K11231; K11711; K07642; K02484; K00760; K11356; K11640; K02482; K02480; K07653; K07636; K11527; K07678; K10715; K02668; K03388; K08479; K10916; K02489; K07716; K07710; K01768; K11383; K13761; K02486; K12767; K04757; K11357; K10125; K07647; K07717; K07675; K10681; K07676; K06379; K07709; K07644;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000022.1_15 3 521 evalue:1.1e-210 qcov:99.40 identity:68.60;
kegg_pathway_id 02020; 04011; 03090; 00790; 00983; 00230; 05111; 00240;
kegg_pathway_name Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system; Folate biosynthesis; Drug metabolism - other enzymes; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF08665; PF00072;
pfam_desc PglZ domain; Response regulator receiver domain;
pfam_id PglZ; Response_reg;
pfam_target db:Pfam-A.hmm|PF08665.12 evalue:1.9e-20 score:72.9 best_domain_score:72.3 name:PglZ; db:Pfam-A.hmm|PF00072.24 evalue:1.9e-24 score:85.2 best_domain_score:83.8 name:Response_reg;
46089 44128 CDS
ID metaerg.pl|09938
allec_ids 3.6.3.41;
allgo_ids GO:0005524; GO:0016887;
allko_ids K02023; K01990; K02193; K09687; K02013; K01995; K02049; K11072; K02045; K10441; K02071; K06861; K01996; K02032; K02006; K02052; K02056; K05847;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC07353.1 1 652 evalue:2.9e-256 qcov:99.80 identity:68.80;
kegg_pathway_id 02010; 00910;
kegg_pathway_name ABC transporters - General; Nitrogen metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF13304; PF13555; PF00005; PF16326; PF12848;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; P-loop containing region of AAA domain; ABC transporter; ABC transporter C-terminal domain; ABC transporter;
pfam_id AAA_21; AAA_29; ABC_tran; ABC_tran_CTD; ABC_tran_Xtn;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.8e-18 score:66.0 best_domain_score:23.0 name:AAA_21; db:Pfam-A.hmm|PF13555.6 evalue:8.6e-09 score:34.3 best_domain_score:17.0 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:8.3e-50 score:168.1 best_domain_score:86.8 name:ABC_tran; db:Pfam-A.hmm|PF16326.5 evalue:1.1e-09 score:37.7 best_domain_score:37.7 name:ABC_tran_CTD; db:Pfam-A.hmm|PF12848.7 evalue:6.9e-20 score:70.1 best_domain_score:69.7 name:ABC_tran_Xtn;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YbiT;
sprot_id sp|P0A9U5|YBIT_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9U5|YBIT_ECO57 1 529 evalue:3.4e-118 qcov:81.00 identity:42.90;
tigrfam_acc TIGR01189;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:1.6e-41 score:141.3 best_domain_score:62.4 name:TIGR01189;
47321 46164 CDS
ID metaerg.pl|09939
allgo_ids GO:0003824; GO:0050662;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000031.1_22 1 383 evalue:1.2e-119 qcov:99.50 identity:54.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF01370; PF07993;
pfam_desc NAD dependent epimerase/dehydratase family; Male sterility protein;
pfam_id Epimerase; NAD_binding_4;
pfam_target db:Pfam-A.hmm|PF01370.21 evalue:2.2e-13 score:49.5 best_domain_score:43.4 name:Epimerase; db:Pfam-A.hmm|PF07993.12 evalue:7.9e-05 score:21.2 best_domain_score:13.0 name:NAD_binding_4;
sp YES;
tigrfam_acc TIGR01409;
tigrfam_desc Tat (twin-arginine translocation) pathway signal sequence;
tigrfam_mainrole Protein fate;
tigrfam_name TAT_signal_seq;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01409 evalue:0.00012 score:21.4 best_domain_score:21.4 name:TIGR01409;
tm_num 1;
46164 46250 signal_peptide
ID metaerg.pl|09940
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
47321 46164 transmembrane_helix
ID metaerg.pl|09941
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i46182-46250o;
48190 47453 CDS
ID metaerg.pl|09942
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000241.1_8 15 244 evalue:3.7e-39 qcov:93.90 identity:46.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
tm_num 1;
48190 47453 transmembrane_helix
ID metaerg.pl|09943
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i47531-47599o;
50056 48389 CDS
ID metaerg.pl|09944
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0009060; GO:0016021; GO:0020037; GO:0055114; GO:0005886; GO:0070469; GO:0046872; GO:0006119;
allko_ids K02274;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__FEN-1250;s__FEN-1250 sp003142495;
genomedb_acc GCA_003142495.1;
genomedb_target db:genomedb|GCA_003142495.1|PLMM01000024.1_2 4 552 evalue:1.1e-206 qcov:98.90 identity:63.40;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00115;
pfam_desc Cytochrome C and Quinol oxidase polypeptide I;
pfam_id COX1;
pfam_target db:Pfam-A.hmm|PF00115.20 evalue:1.6e-84 score:283.5 best_domain_score:283.5 name:COX1;
sprot_desc Cytochrome c oxidase subunit 1;
sprot_id sp|Q5SJ79|COX1_THET8;
sprot_target db:uniprot_sprot|sp|Q5SJ79|COX1_THET8 18 541 evalue:6.6e-123 qcov:94.40 identity:42.30;
tm_num 13;
50056 48389 transmembrane_helix
ID metaerg.pl|09945
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i48449-48517o48581-48649i48686-48754o48812-48880i48938-49006o49064-49132i49166-49234o49277-49345i49406-49474o49532-49600i49637-49705o49787-49855i49952-50020o;
50520 50053 CDS
ID metaerg.pl|09946
allgo_ids GO:0004129; GO:0005507; GO:0016020;
allko_ids K00376;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rhodothermaceae;g__Rhodothermus;s__Rhodothermus marinus;
genomedb_acc GCF_000024845.1;
genomedb_target db:genomedb|GCF_000024845.1|WP_012844063.1 1 155 evalue:7.1e-52 qcov:100.00 identity:62.60;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00116;
pfam_desc Cytochrome C oxidase subunit II, periplasmic domain;
pfam_id COX2;
pfam_target db:Pfam-A.hmm|PF00116.20 evalue:1e-07 score:31.1 best_domain_score:30.7 name:COX2;
tm_num 1;
50520 50053 transmembrane_helix
ID metaerg.pl|09947
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i50077-50145o;
50729 50523 CDS
ID metaerg.pl|09948
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
tm_num 1;
50729 50523 transmembrane_helix
ID metaerg.pl|09949
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology o50652-50720i;
50995 50726 CDS
ID metaerg.pl|09950
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
tm_num 2;
50995 50726 transmembrane_helix
ID metaerg.pl|09951
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i50756-50824o50867-50935i;
51340 52236 CDS
ID metaerg.pl|09952
allec_ids 2.5.1.141; 2.5.1.-;
allgo_ids GO:0016021; GO:0016765; GO:0005886; GO:0008495; GO:0048034;
allko_ids K02257;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV26307.1 3 296 evalue:8.4e-86 qcov:98.70 identity:61.00;
kegg_pathway_id 00860; 00190;
kegg_pathway_name Porphyrin and chlorophyll metabolism; Oxidative phosphorylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metabolic_acc TIGR01473;
metabolic_process compound:Oxygen;process:Cytochrome (quinone) oxidase, bo type;gene:CyoE;;
metabolic_target db:metabolic.hmm|TIGR01473 evalue:8.2e-74 score:248.0 best_domain_score:247.8 name:TIGR01473;
metacyc_pathway_id PWY-5133; PWY-5864; PWY-6129; PWY-6383; PWY-5027; PWY-5893; PWY-5838; PWY-4502; PWY-5064; PWY-5899; PWY-5134; PWY-6520; PWY-5817; PWY-6403; PWY-5898; PWY-5816; PWY-5863; PWY-5896; PWY-5845; PWY-5862; PWY-5068; PWY-2681; PWY-5701; PWY-5140; PWY-5135; PWY-5806; PWY-6404; PWY-724; PWY-5861; PWY-6262; PWY-5805; PWY-5783; POLYISOPRENSYN-PWY; PWY-5132; PWY-5897; PWY-5808; PWY-6263;
metacyc_pathway_name colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; wighteone and luteone biosynthesis;; chlorophyll a biosynthesis II;; superpathway of menaquinol-13 biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;; superpathway of menaquinol-12 biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;; shikonin biosynthesis;; cannabinoid biosynthesis;; xanthohumol biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; demethylmenaquinol-8 biosynthesis II;; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; polyisoprenoid biosynthesis (E. coli);; lupulone and humulone biosynthesis;; superpathway of menaquinol-11 biosynthesis;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-8 biosynthesis II;;
metacyc_pathway_type TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; QUINONE-SYN;; TERPENOPHENOLICS-SYN;; PRENYLFLAVONOID-SYN;; Polyprenyl-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF01040;
pfam_desc UbiA prenyltransferase family;
pfam_id UbiA;
pfam_target db:Pfam-A.hmm|PF01040.18 evalue:8.6e-45 score:152.2 best_domain_score:151.8 name:UbiA;
sprot_desc Protoheme IX farnesyltransferase;
sprot_id sp|Q01YC2|COXX_SOLUE;
sprot_target db:uniprot_sprot|sp|Q01YC2|COXX_SOLUE 15 298 evalue:8.6e-53 qcov:95.30 identity:43.50;
tigrfam_acc TIGR01473;
tigrfam_desc protoheme IX farnesyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cyoE_ctaB;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01473 evalue:8.2e-74 score:248.0 best_domain_score:247.8 name:TIGR01473;
tm_num 9;
51340 52236 transmembrane_helix
ID metaerg.pl|09953
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i51409-51477o51487-51555i51616-51684o51694-51747i51766-51825o51853-51921i51982-52050o52060-52128i52162-52215o;
52283 53590 CDS
ID metaerg.pl|09954
allec_ids 3.4.11.25;
allgo_ids GO:0042597; GO:0004177;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000001.1_149 31 433 evalue:3.2e-142 qcov:92.60 identity:66.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF03576;
pfam_desc Peptidase family S58;
pfam_id Peptidase_S58;
pfam_target db:Pfam-A.hmm|PF03576.14 evalue:4.9e-110 score:367.0 best_domain_score:366.7 name:Peptidase_S58;
sp YES;
sprot_desc Beta-peptidyl aminopeptidase BapA;
sprot_id sp|A0MTQ2|BAPA_SPHMI;
sprot_target db:uniprot_sprot|sp|A0MTQ2|BAPA_SPHMI 51 429 evalue:2.2e-57 qcov:87.10 identity:40.10;
52283 52354 signal_peptide
ID metaerg.pl|09955
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
53634 54950 CDS
ID metaerg.pl|09956
allec_ids 1.4.1.3;
allgo_ids GO:0006520; GO:0016491; GO:0055114; GO:0004353;
allko_ids K00260; K00262; K00261; K00263;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Demequinaceae;g__Demequina;s__Demequina lutea_A;
genomedb_acc GCA_003246255.1;
genomedb_target db:genomedb|GCA_003246255.1|QKAX01000208.1_11 35 437 evalue:7.0e-105 qcov:92.00 identity:50.40;
kegg_pathway_id 00471; 00251; 00290; 00330; 00280; 00910;
kegg_pathway_name D-Glutamine and D-glutamate metabolism; Glutamate metabolism; Valine, leucine and isoleucine biosynthesis; Arginine and proline metabolism; Valine, leucine and isoleucine degradation; Nitrogen metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id GLUTAMATE-SYN2-PWY; PWY-5505; PWY-5766; ARGININE-SYN4-PWY;
metacyc_pathway_name L-glutamate biosynthesis II;; L-glutamate and L-glutamine biosynthesis;; L-glutamate degradation X;; L-ornithine biosynthesis II;;
metacyc_pathway_type GLUTAMATE-SYN;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;; GLUTAMATE-DEG;; L-Ornithine-Biosynthesis;;
pfam_acc PF00208; PF02812;
pfam_desc Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF00208.21 evalue:1.4e-58 score:197.7 best_domain_score:197.3 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:1e-47 score:160.5 best_domain_score:159.4 name:ELFV_dehydrog_N;
sprot_desc Glutamate dehydrogenase;
sprot_id sp|P96110|DHE3_THEMA;
sprot_target db:uniprot_sprot|sp|P96110|DHE3_THEMA 39 437 evalue:1.7e-94 qcov:91.10 identity:45.50;
55566 55045 CDS
ID metaerg.pl|09957
allgo_ids GO:0002100; GO:0008251;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC05943.1 1 172 evalue:3.1e-64 qcov:99.40 identity:66.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00383; PF14437;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase;
pfam_id dCMP_cyt_deam_1; MafB19-deam;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:4.3e-20 score:70.7 best_domain_score:70.2 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:4.1e-11 score:42.0 best_domain_score:41.7 name:MafB19-deam;
56120 55572 CDS
ID metaerg.pl|09958
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC05945.1 2 172 evalue:6.8e-54 qcov:94.00 identity:59.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF14595;
pfam_desc Thioredoxin;
pfam_id Thioredoxin_9;
pfam_target db:Pfam-A.hmm|PF14595.6 evalue:4.1e-33 score:113.1 best_domain_score:112.6 name:Thioredoxin_9;
57991 56147 CDS
ID metaerg.pl|09959
allgo_ids GO:0003924; GO:0005525; GO:0005829; GO:1990904; GO:0006412;
allko_ids K00955; K00860; K00956; K06207;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002500925;
genomedb_acc GCA_002500925.1;
genomedb_target db:genomedb|GCA_002500925.1|DLTN01000123.1_62 1 607 evalue:1.4e-255 qcov:98.90 identity:73.10;
kegg_pathway_id 00450; 00920; 00230;
kegg_pathway_name Selenoamino acid metabolism; Sulfur metabolism; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00679; PF00009; PF03144; PF01926;
pfam_desc Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; 50S ribosome-binding GTPase;
pfam_id EFG_C; GTP_EFTU; GTP_EFTU_D2; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00679.24 evalue:5.4e-23 score:80.1 best_domain_score:79.1 name:EFG_C; db:Pfam-A.hmm|PF00009.27 evalue:3.7e-57 score:192.2 best_domain_score:191.3 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:3.9e-12 score:45.6 best_domain_score:44.1 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF01926.23 evalue:9.9e-07 score:28.1 best_domain_score:27.0 name:MMR_HSR1;
sprot_desc GTP-binding protein TypA/BipA homolog;
sprot_id sp|O25225|TYPA_HELPY;
sprot_target db:uniprot_sprot|sp|O25225|TYPA_HELPY 2 607 evalue:1.1e-192 qcov:98.70 identity:54.60;
tigrfam_acc TIGR00231; TIGR01394;
tigrfam_desc small GTP-binding protein domain; GTP-binding protein TypA/BipA;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; TypA_BipA;
tigrfam_sub1role General; Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:9.3e-23 score:79.9 best_domain_score:79.1 name:TIGR00231; db:TIGRFAMs.hmm|TIGR01394 evalue:5.6e-277 score:918.9 best_domain_score:918.7 name:TIGR01394;
58190 59608 CDS
ID metaerg.pl|09960
allko_ids K04564; K01760; K01011; K01007; K01180; K01738; K01069; K01802; K02439;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91512.1 1 472 evalue:3.8e-165 qcov:100.00 identity:60.90;
kegg_pathway_id 00620; 00720; 00910; 00450; 00920; 00271; 00272;
kegg_pathway_name Pyruvate metabolism; Reductive carboxylate cycle (CO2 fixation); Nitrogen metabolism; Selenoamino acid metabolism; Sulfur metabolism; Methionine metabolism; Cysteine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00753; PF00581;
pfam_desc Metallo-beta-lactamase superfamily; Rhodanese-like domain;
pfam_id Lactamase_B; Rhodanese;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:1.7e-08 score:33.9 best_domain_score:33.4 name:Lactamase_B; db:Pfam-A.hmm|PF00581.20 evalue:1.3e-24 score:86.0 best_domain_score:62.5 name:Rhodanese;
59781 61427 CDS
ID metaerg.pl|09961
allko_ids K00689; K01212; K01200; K03332;
kegg_pathway_id 00500; 02020; 00051;
kegg_pathway_name Starch and sucrose metabolism; Two-component system - General; Fructose and mannose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF02368; PF13715; PF13620;
pfam_desc Bacterial Ig-like domain (group 2); CarboxypepD_reg-like domain; Carboxypeptidase regulatory-like domain;
pfam_id Big_2; CarbopepD_reg_2; CarboxypepD_reg;
pfam_target db:Pfam-A.hmm|PF02368.18 evalue:1.1e-14 score:53.3 best_domain_score:45.2 name:Big_2; db:Pfam-A.hmm|PF13715.6 evalue:4e-08 score:32.4 best_domain_score:31.1 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF13620.6 evalue:1.1e-13 score:50.5 best_domain_score:50.5 name:CarboxypepD_reg;
sp YES;
tm_num 1;
59781 59864 lipoprotein_signal_peptide
ID metaerg.pl|09962
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
59781 61427 transmembrane_helix
ID metaerg.pl|09963
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i59817-59885o;
64220 61497 CDS
ID metaerg.pl|09964
allgo_ids GO:0004181; GO:0006508; GO:0008270;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Longibacter;s__Longibacter salinarum;
genomedb_acc GCF_002554795.1;
genomedb_target db:genomedb|GCF_002554795.1|WP_098075418.1 25 903 evalue:3.3e-282 qcov:96.90 identity:53.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00246;
pfam_desc Zinc carboxypeptidase;
pfam_id Peptidase_M14;
pfam_target db:Pfam-A.hmm|PF00246.24 evalue:2e-19 score:69.7 best_domain_score:69.1 name:Peptidase_M14;
sp YES;
tm_num 1;
61497 61622 signal_peptide
ID metaerg.pl|09965
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
64220 61497 transmembrane_helix
ID metaerg.pl|09966
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i61557-61625o;
66479 64350 CDS
ID metaerg.pl|09967
allgo_ids GO:0005515;
allko_ids K08884;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter sp001564065;
genomedb_acc GCA_001564065.1;
genomedb_target db:genomedb|GCA_001564065.1|LKNA01000047.1_9 4 697 evalue:6.8e-142 qcov:97.90 identity:42.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF03704; PF00515; PF13414; PF13431; PF14559; PF07719;
pfam_desc Bacterial transcriptional activator domain; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id BTAD; TPR_1; TPR_11; TPR_17; TPR_19; TPR_2;
pfam_target db:Pfam-A.hmm|PF03704.17 evalue:1.2e-10 score:41.2 best_domain_score:41.2 name:BTAD; db:Pfam-A.hmm|PF00515.28 evalue:5.5e-09 score:34.7 best_domain_score:7.7 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:3.1e-10 score:38.8 best_domain_score:11.3 name:TPR_11; db:Pfam-A.hmm|PF13431.6 evalue:1.6e-11 score:43.0 best_domain_score:14.3 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:4.8e-11 score:42.3 best_domain_score:20.7 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:5.5e-12 score:44.1 best_domain_score:12.4 name:TPR_2;
sp YES;
64350 64457 lipoprotein_signal_peptide
ID metaerg.pl|09968
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
68933 67368 CDS
ID metaerg.pl|09969
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Halorhodospiraceae;g__Halorhodospira;s__Halorhodospira halophila;
genomedb_acc GCF_000015585.1;
genomedb_target db:genomedb|GCF_000015585.1|WP_011814413.1 14 520 evalue:6.1e-148 qcov:97.30 identity:54.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00561; PF12146;
pfam_desc alpha/beta hydrolase fold; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:8.1e-07 score:28.2 best_domain_score:27.5 name:Abhydrolase_1; db:Pfam-A.hmm|PF12146.8 evalue:2.1e-13 score:49.3 best_domain_score:48.8 name:Hydrolase_4;
sp YES;
tm_num 9;
67368 67445 signal_peptide
ID metaerg.pl|09970
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
68933 67368 transmembrane_helix
ID metaerg.pl|09971
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i67386-67439o68178-68246i68283-68336o68364-68432i68493-68561o68589-68651i68688-68747o68757-68825i68859-68927o;
69899 68973 CDS
ID metaerg.pl|09972
allec_ids 3.1.21.2;
allgo_ids GO:0008833; GO:0003677; GO:0003906; GO:0008081; GO:0008270; GO:0006284;
allko_ids K01151;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000054.1_109 26 305 evalue:1.2e-103 qcov:90.90 identity:67.90;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF01261;
pfam_desc Xylose isomerase-like TIM barrel;
pfam_id AP_endonuc_2;
pfam_target db:Pfam-A.hmm|PF01261.24 evalue:5.4e-31 score:106.9 best_domain_score:106.5 name:AP_endonuc_2;
sprot_desc Probable endonuclease 4;
sprot_id sp|Q74FS7|END4_GEOSL;
sprot_target db:uniprot_sprot|sp|Q74FS7|END4_GEOSL 26 302 evalue:3.4e-60 qcov:89.90 identity:45.40;
tigrfam_acc TIGR00587;
tigrfam_desc apurinic endonuclease (APN1);
tigrfam_mainrole DNA metabolism;
tigrfam_name nfo;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00587 evalue:6.9e-75 score:251.0 best_domain_score:250.8 name:TIGR00587;
71322 69904 CDS
ID metaerg.pl|09973
allec_ids 4.2.1.2;
allgo_ids GO:0006099; GO:0016829; GO:0045239; GO:0004333; GO:0006106;
allko_ids K01744; K01679; K01857; K01756;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000054.1_106 1 470 evalue:6.4e-181 qcov:99.60 identity:70.00;
kegg_pathway_id 00910; 00362; 00720; 00252; 00230; 00020;
kegg_pathway_name Nitrogen metabolism; Benzoate degradation via hydroxylation; Reductive carboxylate cycle (CO2 fixation); Alanine and aspartate metabolism; Purine metabolism; Citrate cycle (TCA cycle);
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id TCA-GLYOX-BYPASS; ANARESP1-PWY; PWY-6146; P105-PWY; PWY-5690; PWY-5913; P42-PWY; P108-PWY; TCA; FERMENTATION-PWY; PWY-5464; P23-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5392; REDCITCYC; PWY-561;
metacyc_pathway_name superpathway of glyoxylate bypass and TCA;; ; Methanobacterium thermoautotrophicum biosynthetic metabolism;; TCA cycle IV (2-oxoglutarate decarboxylase);; TCA cycle II (plants and fungi);; partial TCA cycle (obligate autotrophs);; incomplete reductive TCA cycle;; pyruvate fermentation to propanoate I;; TCA cycle I (prokaryotic);; mixed acid fermentation;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; reductive TCA cycle I;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; reductive TCA cycle II;; TCA cycle VIII (Helicobacter);; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Super-Pathways; TCA-VARIANTS;; ; Biosynthesis; Super-Pathways;; TCA-VARIANTS;; TCA-VARIANTS;; TCA-VARIANTS;; Reductive-TCA-Cycles;; Pyruvate-Propanoate-Fermentation;; TCA-VARIANTS;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF10415; PF00206;
pfam_desc Fumarase C C-terminus; Lyase;
pfam_id FumaraseC_C; Lyase_1;
pfam_target db:Pfam-A.hmm|PF10415.9 evalue:8.6e-20 score:70.2 best_domain_score:68.5 name:FumaraseC_C; db:Pfam-A.hmm|PF00206.20 evalue:5.7e-103 score:343.8 best_domain_score:343.4 name:Lyase_1;
sprot_desc Fumarate hydratase class II;
sprot_id sp|Q82ID7|FUMC_STRAW;
sprot_target db:uniprot_sprot|sp|Q82ID7|FUMC_STRAW 3 465 evalue:7.0e-142 qcov:98.10 identity:57.90;
72214 71489 CDS
ID metaerg.pl|09974
allec_ids 1.1.1.385;
allgo_ids GO:0016491; GO:0017000;
allko_ids K03366; K12420; K00022; K19548;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000004.1_181 5 241 evalue:1.2e-74 qcov:98.30 identity:60.80;
kegg_pathway_id 00310; 00281; 00280; 00930; 00380; 00062; 00650; 00071;
kegg_pathway_name Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Caprolactam degradation; Tryptophan metabolism; Fatty acid elongation in mitochondria; Butanoate metabolism; Fatty acid metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:4.2e-58 score:195.2 best_domain_score:195.0 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:4e-44 score:150.1 best_domain_score:149.8 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:1.4e-13 score:50.4 best_domain_score:50.1 name:KR;
sprot_desc Dihydroanticapsin 7-dehydrogenase;
sprot_id sp|P39640|BACC_BACSU;
sprot_target db:uniprot_sprot|sp|P39640|BACC_BACSU 3 192 evalue:2.0e-31 qcov:78.80 identity:37.90;
72354 73076 CDS
ID metaerg.pl|09975
allec_ids 1.3.1.104;
allgo_ids GO:0004318; GO:0050661; GO:0016616; GO:0030497; GO:0055114; GO:0051289;
allko_ids K10780;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000299.1_43 3 239 evalue:3.9e-73 qcov:98.80 identity:59.50;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:6.2e-44 score:149.0 best_domain_score:148.8 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.2e-50 score:170.7 best_domain_score:170.5 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:1e-12 score:47.6 best_domain_score:46.7 name:KR;
sprot_desc Enoyl-[acyl-carrier-protein] reductase [NADPH] FabL;
sprot_id sp|P71079|FABL_BACSU;
sprot_target db:uniprot_sprot|sp|P71079|FABL_BACSU 3 238 evalue:5.3e-29 qcov:98.30 identity:34.40;
74136 73150 CDS
ID metaerg.pl|09976
allec_ids 1.8.1.9;
allgo_ids GO:0016491; GO:0055114; GO:0009941; GO:0005829; GO:0005739; GO:0004791; GO:0051781; GO:0019430;
allko_ids K00384;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA6615;f__UBA6615;g__UBA8079;s__UBA8079 sp002724635;
genomedb_acc GCA_002724635.1;
genomedb_target db:genomedb|GCA_002724635.1|MBO22566.1 1 310 evalue:5.7e-128 qcov:94.50 identity:72.90;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id THIOREDOX-PWY;
metacyc_pathway_name thioredoxin pathway;;
metacyc_pathway_type Reductants;;
pfam_acc PF00890; PF13450; PF00070; PF07992; PF13738;
pfam_desc FAD binding domain; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id FAD_binding_2; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:1.4e-07 score:30.2 best_domain_score:12.6 name:FAD_binding_2; db:Pfam-A.hmm|PF13450.6 evalue:2.2e-05 score:23.8 best_domain_score:17.8 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:9.7e-13 score:47.7 best_domain_score:46.0 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:2e-45 score:154.5 best_domain_score:154.3 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:4.4e-18 score:64.8 best_domain_score:60.4 name:Pyr_redox_3;
sprot_desc Thioredoxin reductase 1, mitochondrial;
sprot_id sp|Q39243|TRXB1_ARATH;
sprot_target db:uniprot_sprot|sp|Q39243|TRXB1_ARATH 2 308 evalue:4.3e-90 qcov:93.60 identity:55.40;
tigrfam_acc TIGR01292;
tigrfam_desc thioredoxin-disulfide reductase;
tigrfam_mainrole Energy metabolism;
tigrfam_name TRX_reduct;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01292 evalue:1.3e-110 score:368.0 best_domain_score:367.9 name:TIGR01292;
75164 74160 CDS
ID metaerg.pl|09977
allec_ids 1.18.1.2;
allgo_ids GO:0004499; GO:0050660; GO:0050661; GO:0055114; GO:0004324;
allko_ids K00384; K00382; K00266; K21567;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000299.1_45 1 334 evalue:3.0e-132 qcov:100.00 identity:70.10;
kegg_pathway_id 00010; 00280; 00240; 00020; 00260; 00620; 00252; 00251; 00910;
kegg_pathway_name Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation; Pyrimidine metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Pyruvate metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Nitrogen metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id PHOTOALL-PWY; PWY-101;
metacyc_pathway_name oxygenic photosynthesis;; photosynthesis light reactions;;
metacyc_pathway_type Photosynthesis; Super-Pathways;; Electron-Transfer; Photosynthesis;;
pfam_acc PF12831; PF00743; PF03486; PF13434; PF13450; PF00070; PF07992; PF13738;
pfam_desc FAD dependent oxidoreductase; Flavin-binding monooxygenase-like; HI0933-like protein; L-lysine 6-monooxygenase (NADPH-requiring); NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id FAD_oxidored; FMO-like; HI0933_like; K_oxygenase; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF12831.7 evalue:1.2e-07 score:30.7 best_domain_score:29.9 name:FAD_oxidored; db:Pfam-A.hmm|PF00743.19 evalue:2.1e-06 score:25.7 best_domain_score:25.0 name:FMO-like; db:Pfam-A.hmm|PF03486.14 evalue:3e-11 score:41.9 best_domain_score:23.2 name:HI0933_like; db:Pfam-A.hmm|PF13434.6 evalue:5.9e-08 score:31.5 best_domain_score:27.1 name:K_oxygenase; db:Pfam-A.hmm|PF13450.6 evalue:1e-06 score:28.1 best_domain_score:25.3 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:3.1e-14 score:52.5 best_domain_score:39.3 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.5e-32 score:112.2 best_domain_score:112.0 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:4.8e-27 score:94.2 best_domain_score:86.5 name:Pyr_redox_3;
sprot_desc Ferredoxin--NADP reductase;
sprot_id sp|Q5SL28|FENR_THET8;
sprot_target db:uniprot_sprot|sp|Q5SL28|FENR_THET8 1 328 evalue:7.3e-93 qcov:98.20 identity:51.80;
76476 75196 CDS
ID metaerg.pl|09978
allgo_ids GO:0016021; GO:0005886;
allko_ids K03548;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000299.1_46 2 426 evalue:6.4e-95 qcov:99.80 identity:48.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:9.7e-59 score:198.4 best_domain_score:198.4 name:AI-2E_transport;
sprot_desc Putative permease PerM;
sprot_id sp|P0AFJ0|PERM_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFJ0|PERM_ECO57 63 408 evalue:4.1e-16 qcov:81.20 identity:24.00;
tm_num 9;
76476 75196 transmembrane_helix
ID metaerg.pl|09979
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology o75223-75327i75346-75405o75415-75483i75544-75612o75856-75924i76027-76095o76105-76173i76186-76254o76321-76389i;
76997 76476 CDS
ID metaerg.pl|09980
allec_ids 3.6.1.-;
allgo_ids GO:0016787; GO:0016818;
allko_ids K01515; K08310; K01529; K03574; K01518; K03575; K08311;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000299.1_47 21 159 evalue:2.6e-39 qcov:80.30 identity:59.00;
kegg_pathway_id 00790; 00230; 00240; 03410;
kegg_pathway_name Folate biosynthesis; Purine metabolism; Pyrimidine metabolism; Base excision repair;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
metacyc_pathway_id PWY-6147; PWY-6502; ALL-CHORISMATE-PWY; PWY-6383; FOLSYN-PWY; PWY-6404; PWY-5354;
metacyc_pathway_name 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; oxidized GTP and dGTP detoxification;; superpathway of chorismate metabolism;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ;
metacyc_pathway_type 6-HM-Dihydropterin-PP-Biosynthesis;; Detoxification; Metabolic-Clusters;; Super-Pathways;; Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; ;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:4.5e-19 score:68.0 best_domain_score:67.7 name:NUDIX;
sprot_desc RNA pyrophosphohydrolase;
sprot_id sp|A1B502|RPPH_PARDP;
sprot_target db:uniprot_sprot|sp|A1B502|RPPH_PARDP 30 160 evalue:6.0e-06 qcov:75.70 identity:26.90;
78001 77012 CDS
ID metaerg.pl|09981
allko_ids K02067;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000004.1_177 9 329 evalue:7.9e-69 qcov:97.60 identity:44.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF02470;
pfam_desc MlaD protein;
pfam_id MlaD;
pfam_target db:Pfam-A.hmm|PF02470.20 evalue:1.8e-13 score:49.8 best_domain_score:48.3 name:MlaD;
tm_num 1;
78001 77012 transmembrane_helix
ID metaerg.pl|09982
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i77030-77098o;
78747 77998 CDS
ID metaerg.pl|09983
allgo_ids GO:0005524; GO:0016887; GO:0009507; GO:0009570; GO:0009536; GO:0006869;
allko_ids K02003; K01997; K05847; K02010; K02006; K02052; K11084; K02017; K01996; K02071; K06861; K11072; K02045; K02068; K02065; K01995; K02049; K01998; K10112; K10111; K05816; K10235; K11076; K10243; K01990; K02023; K02000;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000299.1_49 1 248 evalue:2.7e-93 qcov:99.60 identity:67.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:3.7e-30 score:104.5 best_domain_score:104.1 name:ABC_tran;
sprot_desc hypothetical protein;
sprot_id sp|Q9AT00|TGD3_ARATH;
sprot_target db:uniprot_sprot|sp|Q9AT00|TGD3_ARATH 3 240 evalue:1.0e-43 qcov:95.60 identity:40.80;
79502 78777 CDS
ID metaerg.pl|09984
allgo_ids GO:0043190;
allko_ids K02066;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000004.1_175 4 241 evalue:2.0e-85 qcov:98.80 identity:71.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF02405;
pfam_desc Permease MlaE;
pfam_id MlaE;
pfam_target db:Pfam-A.hmm|PF02405.16 evalue:8.3e-71 score:237.3 best_domain_score:237.0 name:MlaE;
sprot_desc Probable ABC transporter permease protein RP096;
sprot_id sp|Q9ZE51|Y096_RICPR;
sprot_target db:uniprot_sprot|sp|Q9ZE51|Y096_RICPR 14 231 evalue:2.0e-36 qcov:90.50 identity:40.40;
tigrfam_acc TIGR00056;
tigrfam_desc ABC transport permease subunit;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00056;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00056 evalue:6.9e-64 score:215.1 best_domain_score:215.0 name:TIGR00056;
tm_num 5;
79502 78777 transmembrane_helix
ID metaerg.pl|09985
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology i78891-78959o78969-79037i79179-79247o79323-79391i79428-79496o;
80010 79630 CDS
ID metaerg.pl|09986
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000004.1_174 1 124 evalue:5.8e-28 qcov:98.40 identity:55.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
80364 81614 CDS
ID metaerg.pl|09987
allec_ids 3.6.4.-;
allgo_ids GO:0005524; GO:0004386; GO:0003723; GO:0008186; GO:0006353;
allko_ids K03628;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89597.1 1 413 evalue:1.5e-202 qcov:99.30 identity:85.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00006; PF07498; PF07497;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain;
pfam_id ATP-synt_ab; Rho_N; Rho_RNA_bind;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:2e-22 score:79.1 best_domain_score:78.7 name:ATP-synt_ab; db:Pfam-A.hmm|PF07498.12 evalue:8.2e-16 score:56.9 best_domain_score:53.9 name:Rho_N; db:Pfam-A.hmm|PF07497.12 evalue:2e-31 score:106.9 best_domain_score:106.2 name:Rho_RNA_bind;
sprot_desc Transcription termination factor Rho;
sprot_id sp|Q1RIJ6|RHO_RICBR;
sprot_target db:uniprot_sprot|sp|Q1RIJ6|RHO_RICBR 1 414 evalue:4.1e-154 qcov:99.50 identity:64.40;
tigrfam_acc TIGR00767;
tigrfam_desc transcription termination factor Rho;
tigrfam_mainrole Transcription;
tigrfam_name rho;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00767 evalue:3.7e-209 score:693.9 best_domain_score:693.7 name:TIGR00767;
82255 81701 CDS
ID metaerg.pl|09988
allgo_ids GO:0009116;
allko_ids K00762;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000221.1_2 17 183 evalue:8.9e-62 qcov:90.80 identity:67.10;
kegg_pathway_id 00240; 00983;
kegg_pathway_name Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:1.3e-20 score:72.8 best_domain_score:72.5 name:Pribosyltran;
82385 82837 CDS
ID metaerg.pl|09989
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000221.1_3 1 149 evalue:4.9e-26 qcov:99.30 identity:45.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
82952 83200 CDS
ID metaerg.pl|09990
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV24811.1 1 82 evalue:3.0e-25 qcov:100.00 identity:65.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
84047 83133 CDS
ID metaerg.pl|09991
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0005298; GO:0031402; GO:0015824;
allko_ids K11928;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Gracilimonas;s__Gracilimonas sp002694685;
genomedb_acc GCA_002694685.1;
genomedb_target db:genomedb|GCA_002694685.1|MAL18288.1 1 283 evalue:1.6e-95 qcov:93.10 identity:64.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
pfam_acc PF00474;
pfam_desc Sodium:solute symporter family;
pfam_id SSF;
pfam_target db:Pfam-A.hmm|PF00474.17 evalue:2.8e-39 score:134.4 best_domain_score:134.0 name:SSF;
sprot_desc Sodium/proline symporter 1;
sprot_id sp|Q4A070|PUTP1_STAS1;
sprot_target db:uniprot_sprot|sp|Q4A070|PUTP1_STAS1 31 284 evalue:4.7e-38 qcov:83.60 identity:37.30;
tm_num 7;
84047 83133 transmembrane_helix
ID metaerg.pl|09992
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7497; ; 1.38391; 13.1493; 0.0156855;
topology o83220-83288i83325-83393o83505-83573i83631-83699o83712-83780i83799-83858o83886-83939i;
>Feature NODE_72_length_83848_cov_7.19056
1 1368 CDS
ID metaerg.pl|09993
allgo_ids GO:0005737; GO:0050660; GO:0002098;
allko_ids K03495;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25167.1 3 451 evalue:4.3e-166 qcov:98.70 identity:66.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF01134; PF13932;
pfam_desc Glucose inhibited division protein A; GidA associated domain;
pfam_id GIDA; GIDA_assoc;
pfam_target db:Pfam-A.hmm|PF01134.22 evalue:1.6e-79 score:267.0 best_domain_score:266.7 name:GIDA; db:Pfam-A.hmm|PF13932.6 evalue:1.1e-62 score:211.2 best_domain_score:210.7 name:GIDA_assoc;
sprot_desc tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG;
sprot_id sp|Q9RCA8|MNMG_BACHD;
sprot_target db:uniprot_sprot|sp|Q9RCA8|MNMG_BACHD 1 453 evalue:6.2e-119 qcov:99.60 identity:47.60;
tigrfam_acc TIGR00136;
tigrfam_desc tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA;
tigrfam_mainrole Protein synthesis;
tigrfam_name gidA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00136 evalue:1.6e-159 score:531.3 best_domain_score:531.1 name:TIGR00136;
1828 1535 CDS
ID metaerg.pl|09994
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
2374 1883 CDS
ID metaerg.pl|09995
allgo_ids GO:0005615; GO:0030288;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Caldilineaceae;g__Caldilinea;s__Caldilinea aerophila;
genomedb_acc GCF_000281175.1;
genomedb_target db:genomedb|GCF_000281175.1|WP_014433791.1 16 161 evalue:7.7e-41 qcov:89.60 identity:63.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF02469;
pfam_desc Fasciclin domain;
pfam_id Fasciclin;
pfam_target db:Pfam-A.hmm|PF02469.22 evalue:1.2e-37 score:128.2 best_domain_score:128.0 name:Fasciclin;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P74615|Y1483_SYNY3;
sprot_target db:uniprot_sprot|sp|P74615|Y1483_SYNY3 8 161 evalue:5.2e-28 qcov:94.50 identity:48.80;
1883 1951 signal_peptide
ID metaerg.pl|09996
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
2579 3535 CDS
ID metaerg.pl|09997
allgo_ids GO:0031419; GO:0046872; GO:0003677; GO:0016117; GO:0006355;
allko_ids K00548; K01844; K22491;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000082.1_116 1 285 evalue:1.6e-58 qcov:89.60 identity:47.70;
kegg_pathway_id 00670; 00310; 00271;
kegg_pathway_name One carbon pool by folate; Lysine degradation; Methionine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF02310; PF02607; PF13411;
pfam_desc B12 binding domain; B12 binding domain; MerR HTH family regulatory protein;
pfam_id B12-binding; B12-binding_2; MerR_1;
pfam_target db:Pfam-A.hmm|PF02310.19 evalue:2.8e-11 score:42.7 best_domain_score:42.1 name:B12-binding; db:Pfam-A.hmm|PF02607.17 evalue:1.5e-08 score:34.2 best_domain_score:33.3 name:B12-binding_2; db:Pfam-A.hmm|PF13411.6 evalue:1.3e-14 score:53.2 best_domain_score:52.5 name:MerR_1;
sprot_desc HTH-type transcriptional repressor CarH;
sprot_id sp|Q53W62|CARH_THET8;
sprot_target db:uniprot_sprot|sp|Q53W62|CARH_THET8 8 306 evalue:9.6e-26 qcov:94.00 identity:31.30;
4027 4731 CDS
ID metaerg.pl|09998
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
4685 5488 CDS
ID metaerg.pl|09999
allec_ids 3.6.-.-;
allgo_ids GO:0005524; GO:0016491; GO:0055114; GO:0016787; GO:0030435;
allko_ids K03496;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06561.1 1 253 evalue:5.4e-100 qcov:94.80 identity:73.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF13614; PF02374; PF01656; PF06564; PF00142; PF09140; PF10609;
pfam_desc AAA domain; Anion-transporting ATPase; CobQ/CobB/MinD/ParA nucleotide binding domain; Cellulose biosynthesis protein BcsQ; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; ATPase MipZ; NUBPL iron-transfer P-loop NTPase;
pfam_id AAA_31; ArsA_ATPase; CbiA; CBP_BcsQ; Fer4_NifH; MipZ; ParA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:2.6e-62 score:209.1 best_domain_score:208.6 name:AAA_31; db:Pfam-A.hmm|PF02374.15 evalue:1.1e-06 score:27.3 best_domain_score:23.5 name:ArsA_ATPase; db:Pfam-A.hmm|PF01656.23 evalue:9.9e-28 score:96.0 best_domain_score:95.7 name:CbiA; db:Pfam-A.hmm|PF06564.12 evalue:2e-10 score:39.8 best_domain_score:38.8 name:CBP_BcsQ; db:Pfam-A.hmm|PF00142.18 evalue:2.9e-08 score:32.7 best_domain_score:23.7 name:Fer4_NifH; db:Pfam-A.hmm|PF09140.11 evalue:2.2e-08 score:33.0 best_domain_score:18.8 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:7.7e-10 score:37.9 best_domain_score:28.1 name:ParA;
sprot_desc Sporulation initiation inhibitor protein Soj;
sprot_id sp|Q9K5N0|SOJ_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K5N0|SOJ_BACHD 1 251 evalue:3.9e-81 qcov:94.00 identity:62.20;
5485 6396 CDS
ID metaerg.pl|10000
allgo_ids GO:0003677; GO:0007059;
allko_ids K03497;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000226.1_35 1 303 evalue:2.2e-81 qcov:100.00 identity:56.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF17762; PF02195;
pfam_desc HTH domain found in ParB protein; ParB-like nuclease domain;
pfam_id HTH_ParB; ParBc;
pfam_target db:Pfam-A.hmm|PF17762.1 evalue:3.3e-19 score:67.7 best_domain_score:65.0 name:HTH_ParB; db:Pfam-A.hmm|PF02195.18 evalue:1.2e-23 score:82.5 best_domain_score:81.7 name:ParBc;
sprot_desc Probable chromosome-partitioning protein ParB;
sprot_id sp|Q9PB63|PARB_XYLFA;
sprot_target db:uniprot_sprot|sp|Q9PB63|PARB_XYLFA 1 296 evalue:4.8e-51 qcov:97.70 identity:42.30;
tigrfam_acc TIGR00180;
tigrfam_desc ParB/RepB/Spo0J family partition protein;
tigrfam_name parB_part;
tigrfam_target db:TIGRFAMs.hmm|TIGR00180 evalue:5e-54 score:182.0 best_domain_score:181.7 name:TIGR00180;
6414 7184 CDS
ID metaerg.pl|10001
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000028.1_142 1 256 evalue:3.0e-63 qcov:100.00 identity:49.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:5.5e-30 score:102.7 best_domain_score:102.2 name:Peptidase_M23;
tm_num 1;
6414 7184 transmembrane_helix
ID metaerg.pl|10002
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i6507-6575o;
7384 8136 CDS
ID metaerg.pl|10003
allgo_ids GO:0005737; GO:0005739; GO:0046872;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD49667.1 4 250 evalue:9.9e-80 qcov:98.80 identity:60.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF01784;
pfam_desc NIF3 (NGG1p interacting factor 3);
pfam_id NIF3;
pfam_target db:Pfam-A.hmm|PF01784.18 evalue:4.1e-51 score:173.2 best_domain_score:172.9 name:NIF3;
sprot_desc GTP cyclohydrolase 1 type 2 homolog;
sprot_id sp|Q9RY41|GCH1L_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RY41|GCH1L_DEIRA 9 250 evalue:1.7e-54 qcov:96.80 identity:44.30;
tigrfam_acc TIGR00486;
tigrfam_desc dinuclear metal center protein, YbgI/SA1388 family;
tigrfam_mainrole Unknown function;
tigrfam_name YbgI_SA1388;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00486 evalue:6.3e-53 score:179.1 best_domain_score:179.0 name:TIGR00486;
10357 8141 CDS
ID metaerg.pl|10004
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06568.1 20 738 evalue:6.9e-121 qcov:97.40 identity:38.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
sp YES;
8141 8209 signal_peptide
ID metaerg.pl|10005
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
10743 11456 CDS
ID metaerg.pl|10006
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000005.1_102 3 235 evalue:2.7e-42 qcov:98.30 identity:45.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
tm_num 1;
10743 11456 transmembrane_helix
ID metaerg.pl|10007
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i10863-10931o;
11572 12183 CDS
ID metaerg.pl|10008
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91951.1 1 191 evalue:2.3e-74 qcov:94.10 identity:65.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF18306; PF03641;
pfam_desc SLOG cluster4 family; Possible lysine decarboxylase;
pfam_id LDcluster4; Lysine_decarbox;
pfam_target db:Pfam-A.hmm|PF18306.1 evalue:6.2e-15 score:54.4 best_domain_score:54.1 name:LDcluster4; db:Pfam-A.hmm|PF03641.14 evalue:8.9e-35 score:118.9 best_domain_score:118.4 name:Lysine_decarbox;
tigrfam_acc TIGR00730;
tigrfam_desc TIGR00730 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00730;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00730 evalue:1.2e-40 score:138.4 best_domain_score:138.2 name:TIGR00730;
12425 13540 CDS
ID metaerg.pl|10009
allec_ids 2.8.1.8;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0016992; GO:0046872; GO:0009249;
allko_ids K03644;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002500925;
genomedb_acc GCA_002500925.1;
genomedb_target db:genomedb|GCA_002500925.1|DLTN01000047.1_15 4 359 evalue:1.1e-170 qcov:96.00 identity:81.70;
kegg_pathway_id 00785;
kegg_pathway_name Lipoic acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metacyc_pathway_id PWY0-1275; PWY0-501;
metacyc_pathway_name lipoate biosynthesis and incorporation II;; lipoate biosynthesis and incorporation I;;
metacyc_pathway_type Lipoate-Biosynthesis;; Lipoate-Biosynthesis;;
pfam_acc PF16881; PF04055;
pfam_desc N-terminal domain of lipoyl synthase of Radical_SAM family; Radical SAM superfamily;
pfam_id LIAS_N; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF16881.5 evalue:8.8e-12 score:44.6 best_domain_score:43.3 name:LIAS_N; db:Pfam-A.hmm|PF04055.21 evalue:1.7e-10 score:40.7 best_domain_score:40.1 name:Radical_SAM;
sprot_desc Lipoyl synthase;
sprot_id sp|Q1AT13|LIPA_RUBXD;
sprot_target db:uniprot_sprot|sp|Q1AT13|LIPA_RUBXD 45 332 evalue:3.6e-101 qcov:77.60 identity:60.80;
tigrfam_acc TIGR00510;
tigrfam_desc lipoyl synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name lipA;
tigrfam_sub1role Lipoate;
tigrfam_target db:TIGRFAMs.hmm|TIGR00510 evalue:8.3e-111 score:369.2 best_domain_score:368.8 name:TIGR00510;
13537 14622 CDS
ID metaerg.pl|10010
allec_ids 1.2.4.1;
allgo_ids GO:0008661; GO:0016114; GO:0043231; GO:0004739; GO:0006086; GO:0006096;
allko_ids K00161; K11381; K00166; K00162;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000005.1_105 21 355 evalue:3.0e-130 qcov:92.80 identity:66.00;
kegg_pathway_id 00020; 00650; 00252; 00620; 00290; 00280; 00010;
kegg_pathway_name Citrate cycle (TCA cycle); Butanoate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metacyc_pathway_id PWY-5173; PYRUVDEHYD-PWY; PWY-5464;
metacyc_pathway_name superpathway of acetyl-CoA biosynthesis;; pyruvate decarboxylation to acetyl CoA;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF13292; PF00676; PF02775;
pfam_desc 1-deoxy-D-xylulose-5-phosphate synthase; Dehydrogenase E1 component; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain;
pfam_id DXP_synthase_N; E1_dh; TPP_enzyme_C;
pfam_target db:Pfam-A.hmm|PF13292.6 evalue:1e-05 score:24.1 best_domain_score:23.4 name:DXP_synthase_N; db:Pfam-A.hmm|PF00676.20 evalue:1.6e-87 score:292.5 best_domain_score:292.2 name:E1_dh; db:Pfam-A.hmm|PF02775.21 evalue:4.6e-06 score:25.7 best_domain_score:24.5 name:TPP_enzyme_C;
sprot_desc Pyruvate dehydrogenase E1 component subunit alpha;
sprot_id sp|Q9R9N5|ODPA_RHIME;
sprot_target db:uniprot_sprot|sp|Q9R9N5|ODPA_RHIME 1 340 evalue:1.4e-86 qcov:94.20 identity:49.90;
tigrfam_acc TIGR03182;
tigrfam_desc pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name PDH_E1_alph_y;
tigrfam_sub1role Pyruvate dehydrogenase;
tigrfam_target db:TIGRFAMs.hmm|TIGR03182 evalue:7.6e-128 score:425.0 best_domain_score:424.8 name:TIGR03182;
14625 15626 CDS
ID metaerg.pl|10011
allec_ids 1.2.4.1;
allgo_ids GO:0005759; GO:0005739; GO:0004739; GO:0006086; GO:0006096;
allko_ids K00162; K00615; K00167; K11381; K00161;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002500925;
genomedb_acc GCA_002500925.1;
genomedb_target db:genomedb|GCA_002500925.1|DLTN01000047.1_13 1 328 evalue:3.5e-149 qcov:98.50 identity:81.10;
kegg_pathway_id 00020; 00280; 00710; 00010; 00030; 00290; 00650; 01051; 00252; 00620;
kegg_pathway_name Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Pentose phosphate pathway; Valine, leucine and isoleucine biosynthesis; Butanoate metabolism; Biosynthesis of ansamycins; Alanine and aspartate metabolism; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metacyc_pathway_id PWY-5173; PYRUVDEHYD-PWY; PWY-5464;
metacyc_pathway_name superpathway of acetyl-CoA biosynthesis;; pyruvate decarboxylation to acetyl CoA;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF02780; PF02779;
pfam_desc Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain;
pfam_id Transketolase_C; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF02780.20 evalue:2.1e-43 score:146.4 best_domain_score:145.7 name:Transketolase_C; db:Pfam-A.hmm|PF02779.24 evalue:3.1e-46 score:156.5 best_domain_score:156.0 name:Transket_pyr;
sprot_desc Pyruvate dehydrogenase E1 component subunit beta, mitochondrial;
sprot_id sp|O44451|ODPB_CAEEL;
sprot_target db:uniprot_sprot|sp|O44451|ODPB_CAEEL 3 326 evalue:1.5e-109 qcov:97.30 identity:59.50;
15743 17137 CDS
ID metaerg.pl|10012
allec_ids 2.3.1.12;
allgo_ids GO:0016746; GO:0005737; GO:0005759; GO:0005739; GO:0045254; GO:0016407; GO:0004742; GO:0031405; GO:0006096;
allko_ids K00162; K00163; K00382; K11381; K09699; K00658; K00627;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000226.1_51 1 459 evalue:3.0e-138 qcov:98.90 identity:60.20;
kegg_pathway_id 00260; 00020; 00310; 00010; 00280; 00290; 00650; 00620; 00252;
kegg_pathway_name Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle); Lysine degradation; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Butanoate metabolism; Pyruvate metabolism; Alanine and aspartate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metacyc_pathway_id PWY-5464; PYRUVDEHYD-PWY; PWY-5173;
metacyc_pathway_name superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; pyruvate decarboxylation to acetyl CoA;; superpathway of acetyl-CoA biosynthesis;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Acetyl-CoA-Biosynthesis; Super-Pathways;;
pfam_acc PF00198; PF00364; PF13533; PF02817;
pfam_desc 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme; Biotin-lipoyl like; e3 binding domain;
pfam_id 2-oxoacid_dh; Biotin_lipoyl; Biotin_lipoyl_2; E3_binding;
pfam_target db:Pfam-A.hmm|PF00198.23 evalue:1.3e-83 score:279.3 best_domain_score:278.9 name:2-oxoacid_dh; db:Pfam-A.hmm|PF00364.22 evalue:4.5e-19 score:67.3 best_domain_score:66.3 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:7.7e-06 score:24.9 best_domain_score:15.3 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF02817.17 evalue:2.4e-17 score:62.2 best_domain_score:60.5 name:E3_binding;
sprot_desc Dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial;
sprot_id sp|Q5M729|ODP23_ARATH;
sprot_target db:uniprot_sprot|sp|Q5M729|ODP23_ARATH 4 459 evalue:1.4e-78 qcov:98.30 identity:43.10;
tigrfam_acc TIGR01349;
tigrfam_desc pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase;
tigrfam_mainrole Energy metabolism;
tigrfam_name PDHac_trf_mito;
tigrfam_sub1role Pyruvate dehydrogenase;
tigrfam_target db:TIGRFAMs.hmm|TIGR01349 evalue:1.5e-140 score:468.3 best_domain_score:467.7 name:TIGR01349;
17403 18038 CDS
ID metaerg.pl|10013
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
sp YES;
17403 17492 signal_peptide
ID metaerg.pl|10014
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
18314 18643 CDS
ID metaerg.pl|10015
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__PXTQ01;s__PXTQ01 sp003022505;
genomedb_acc GCA_003022505.1;
genomedb_target db:genomedb|GCA_003022505.1|PSQ90015.1 10 106 evalue:2.3e-20 qcov:89.00 identity:47.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
18640 19308 CDS
ID metaerg.pl|10016
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5704;f__UBA5704;g__UBA5704;s__UBA5704 sp002420005;
genomedb_acc GCA_002420005.1;
genomedb_target db:genomedb|GCA_002420005.1|DIHE01000031.1_24 1 204 evalue:5.2e-56 qcov:91.90 identity:52.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF08843;
pfam_desc Nucleotidyl transferase AbiEii toxin, Type IV TA system;
pfam_id AbiEii;
pfam_target db:Pfam-A.hmm|PF08843.11 evalue:1.9e-12 score:46.9 best_domain_score:23.3 name:AbiEii;
19898 19341 CDS
ID metaerg.pl|10017
allgo_ids GO:0016021; GO:0005886;
allko_ids K03744;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000226.1_57 7 181 evalue:5.1e-49 qcov:94.60 identity:60.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF04011;
pfam_desc LemA family;
pfam_id LemA;
pfam_target db:Pfam-A.hmm|PF04011.12 evalue:9.4e-57 score:190.3 best_domain_score:190.1 name:LemA;
sprot_desc hypothetical protein;
sprot_id sp|A8AVK0|LEMA_STRGC;
sprot_target db:uniprot_sprot|sp|A8AVK0|LEMA_STRGC 3 184 evalue:1.4e-32 qcov:98.40 identity:40.70;
tm_num 1;
19898 19341 transmembrane_helix
ID metaerg.pl|10018
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology o19350-19409i;
20196 21617 CDS
ID metaerg.pl|10019
allec_ids 1.8.1.4;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0004148; GO:0009055; GO:0050660; GO:0045454; GO:0006096;
allko_ids K00383; K03388; K00176; K00384; K00658; K00356; K00219; K03885; K00382; K00363; K00362; K00266; K01008; K00529;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06587.1 1 473 evalue:5.1e-194 qcov:100.00 identity:69.80;
kegg_pathway_id 00790; 00620; 00450; 00240; 00720; 00480; 00071; 00190; 00360; 00251; 00252; 00910; 00020; 00260; 00010; 00310; 00280;
kegg_pathway_name Folate biosynthesis; Pyruvate metabolism; Selenoamino acid metabolism; Pyrimidine metabolism; Reductive carboxylate cycle (CO2 fixation); Glutathione metabolism; Fatty acid metabolism; Oxidative phosphorylation; Phenylalanine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Nitrogen metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metacyc_pathway_id PWY-5084; PWY-5173; GLYCLEAV-PWY; PYRUVDEHYD-PWY; PWY-5046; PWY-5464;
metacyc_pathway_name 2-oxoglutarate decarboxylation to succinyl-CoA;; superpathway of acetyl-CoA biosynthesis;; glycine cleavage;; pyruvate decarboxylation to acetyl CoA;; 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Respiration;; Acetyl-CoA-Biosynthesis; Super-Pathways;; GLYCINE-DEG;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Respiration;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF01134; PF13434; PF00070; PF07992; PF13738; PF02852;
pfam_desc Glucose inhibited division protein A; L-lysine 6-monooxygenase (NADPH-requiring); Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id GIDA; K_oxygenase; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF01134.22 evalue:6.2e-07 score:28.1 best_domain_score:25.1 name:GIDA; db:Pfam-A.hmm|PF13434.6 evalue:9e-08 score:30.8 best_domain_score:25.0 name:K_oxygenase; db:Pfam-A.hmm|PF00070.27 evalue:3.9e-23 score:81.0 best_domain_score:76.9 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:2.8e-68 score:229.6 best_domain_score:229.2 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:9.8e-16 score:57.1 best_domain_score:54.3 name:Pyr_redox_3; db:Pfam-A.hmm|PF02852.22 evalue:3.4e-37 score:126.3 best_domain_score:124.7 name:Pyr_redox_dim;
sprot_desc Dihydrolipoyl dehydrogenase;
sprot_id sp|P50970|DLDH_ZYMMO;
sprot_target db:uniprot_sprot|sp|P50970|DLDH_ZYMMO 11 472 evalue:6.4e-119 qcov:97.70 identity:47.10;
tigrfam_acc TIGR01350;
tigrfam_desc dihydrolipoyl dehydrogenase;
tigrfam_name lipoamide_DH;
tigrfam_target db:TIGRFAMs.hmm|TIGR01350 evalue:6.9e-174 score:578.0 best_domain_score:577.8 name:TIGR01350;
21717 22241 CDS
ID metaerg.pl|10020
allgo_ids GO:0003700; GO:0006355;
casgene_acc COG0640_csa3_CAS-I-A;
casgene_name csa3;
casgene_target db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:4.2e-06 score:26.3 best_domain_score:26.3 name:csa3;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000226.1_59 10 157 evalue:4.5e-47 qcov:85.10 identity:64.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF13412; PF13463; PF01047; PF12802;
pfam_desc Winged helix-turn-helix DNA-binding; Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id HTH_24; HTH_27; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF13412.6 evalue:7.1e-06 score:24.7 best_domain_score:23.7 name:HTH_24; db:Pfam-A.hmm|PF13463.6 evalue:4.6e-08 score:32.7 best_domain_score:31.6 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:1.1e-17 score:62.9 best_domain_score:62.3 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:8.1e-15 score:53.7 best_domain_score:53.0 name:MarR_2;
23552 22311 CDS
ID metaerg.pl|10021
allec_ids 1.17.7.4; 1.17.1.2;
allgo_ids GO:0019288; GO:0046872; GO:0050992; GO:0051745; GO:0051539; GO:0016114;
allko_ids K03527;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000069.1_9 3 413 evalue:4.6e-175 qcov:99.50 identity:72.00;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metacyc_pathway_id NONMEVIPP-PWY; PWY-6270; PWY-5121;
metacyc_pathway_name methylerythritol phosphate pathway I;; isoprene biosynthesis I;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);;
metacyc_pathway_type MEP-Pathways;; ISOPRENOIDS; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;;
pfam_acc PF02401;
pfam_desc LytB protein;
pfam_id LYTB;
pfam_target db:Pfam-A.hmm|PF02401.18 evalue:1.2e-73 score:246.9 best_domain_score:246.6 name:LYTB;
sprot_desc 4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
sprot_id sp|B8HWD3|ISPH_CYAP4;
sprot_target db:uniprot_sprot|sp|B8HWD3|ISPH_CYAP4 7 399 evalue:2.4e-98 qcov:95.20 identity:45.60;
tigrfam_acc TIGR00216;
tigrfam_desc 4-hydroxy-3-methylbut-2-enyl diphosphate reductase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ispH_lytB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00216 evalue:3.4e-69 score:232.3 best_domain_score:231.9 name:TIGR00216;
23709 24284 CDS
ID metaerg.pl|10022
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000069.1_10 1 158 evalue:3.6e-29 qcov:82.70 identity:47.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF04186;
pfam_desc FxsA cytoplasmic membrane protein;
pfam_id FxsA;
pfam_target db:Pfam-A.hmm|PF04186.13 evalue:1.7e-34 score:117.4 best_domain_score:117.0 name:FxsA;
tm_num 3;
23709 24284 transmembrane_helix
ID metaerg.pl|10023
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i23721-23780o23790-23849i23940-24008o;
24539 25609 CDS
ID metaerg.pl|10024
allec_ids 3.4.11.-;
allgo_ids GO:0004177; GO:0006508; GO:0008270; GO:0046872; GO:0008237;
allko_ids K01179;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000005.1_176 1 353 evalue:1.9e-140 qcov:99.20 identity:70.00;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF02127; PF01546; PF05343;
pfam_desc Aminopeptidase I zinc metalloprotease (M18); Peptidase family M20/M25/M40; M42 glutamyl aminopeptidase;
pfam_id Peptidase_M18; Peptidase_M20; Peptidase_M42;
pfam_target db:Pfam-A.hmm|PF02127.15 evalue:5.8e-05 score:21.3 best_domain_score:10.0 name:Peptidase_M18; db:Pfam-A.hmm|PF01546.28 evalue:1.1e-08 score:34.2 best_domain_score:33.4 name:Peptidase_M20; db:Pfam-A.hmm|PF05343.14 evalue:4e-87 score:291.1 best_domain_score:290.9 name:Peptidase_M42;
sprot_desc Putative aminopeptidase MJ0555;
sprot_id sp|Q57975|Y555_METJA;
sprot_target db:uniprot_sprot|sp|Q57975|Y555_METJA 7 348 evalue:9.9e-56 qcov:96.10 identity:37.60;
26553 25549 CDS
ID metaerg.pl|10025
allec_ids 2.5.1.141;
allgo_ids GO:0006784; GO:0016021; GO:0016627; GO:0055114; GO:0005886; GO:0008495; GO:0048034;
allko_ids K02257;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__UBA4823;g__RBG-16-57-11;s__RBG-16-57-11 sp001795165;
genomedb_acc GCA_001795165.1;
genomedb_target db:genomedb|GCA_001795165.1|OGO37776.1 1 299 evalue:9.9e-59 qcov:89.50 identity:46.70;
kegg_pathway_id 00860; 00190;
kegg_pathway_name Porphyrin and chlorophyll metabolism; Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF02628;
pfam_desc Cytochrome oxidase assembly protein;
pfam_id COX15-CtaA;
pfam_target db:Pfam-A.hmm|PF02628.15 evalue:7.1e-22 score:77.1 best_domain_score:68.7 name:COX15-CtaA;
sprot_desc Protoheme IX farnesyltransferase;
sprot_id sp|Q5SLI3|COXX_THET8;
sprot_target db:uniprot_sprot|sp|Q5SLI3|COXX_THET8 5 299 evalue:3.1e-51 qcov:88.30 identity:40.50;
tm_num 8;
26553 25549 transmembrane_helix
ID metaerg.pl|10026
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i25567-25635o25738-25791i25828-25896o25924-25992i26053-26121o26179-26247i26302-26370o26398-26457i;
26701 27171 CDS
ID metaerg.pl|10027
allgo_ids GO:0005515;
allko_ids K01768; K08801; K07704; K02478;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000226.1_64 1 156 evalue:3.3e-57 qcov:100.00 identity:67.90;
kegg_pathway_id 00230; 02020;
kegg_pathway_name Purine metabolism; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF01590; PF13185;
pfam_desc GAF domain; GAF domain;
pfam_id GAF; GAF_2;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:6.8e-10 score:38.9 best_domain_score:38.7 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:2.3e-10 score:40.1 best_domain_score:39.8 name:GAF_2;
27219 28028 CDS
ID metaerg.pl|10028
allec_ids 3.1.-.-;
allgo_ids GO:0016787; GO:0046872;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000226.1_65 1 255 evalue:9.1e-63 qcov:94.80 identity:52.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF00753; PF12706;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:4.8e-18 score:65.1 best_domain_score:64.4 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:2.3e-07 score:29.8 best_domain_score:29.0 name:Lactamase_B_2;
sprot_desc Atrochrysone carboxyl ACP thioesterase;
sprot_id sp|P0CU68|CLAF_PASFU;
sprot_target db:uniprot_sprot|sp|P0CU68|CLAF_PASFU 1 236 evalue:3.1e-17 qcov:87.70 identity:29.20;
28178 30694 CDS
ID metaerg.pl|10029
allgo_ids GO:0003824; GO:0050660;
allko_ids K03777; K00102; K00004; K00075;
kegg_pathway_id 00620; 00650; 00530;
kegg_pathway_name Pyruvate metabolism; Butanoate metabolism; Aminosugars metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF02913; PF01565;
pfam_desc FAD linked oxidases, C-terminal domain; FAD binding domain;
pfam_id FAD-oxidase_C; FAD_binding_4;
pfam_target db:Pfam-A.hmm|PF02913.19 evalue:6.2e-66 score:221.8 best_domain_score:220.5 name:FAD-oxidase_C; db:Pfam-A.hmm|PF01565.23 evalue:1.6e-55 score:185.9 best_domain_score:126.9 name:FAD_binding_4;
30685 31971 CDS
ID metaerg.pl|10030
allgo_ids GO:0051539; GO:0046872; GO:0055114;
allko_ids K11260; K00122; K00245; K00235; K00204; K00240; K00246; K03390; K00443; K08264; K03388; K00176; K05588; K11181; K00172; K00124; K00265; K00125; K00226; K00205; K00441; K00171; K11473;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89446.1 3 426 evalue:1.9e-131 qcov:99.10 identity:56.20;
kegg_pathway_id 00620; 05012; 00630; 00790; 00650; 00640; 00720; 00632; 00240; 00251; 00633; 00910; 02020; 00190; 00680; 00010; 00020;
kegg_pathway_name Pyruvate metabolism; Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Folate biosynthesis; Butanoate metabolism; Propanoate metabolism; Reductive carboxylate cycle (CO2 fixation); Benzoate degradation via CoA ligation; Pyrimidine metabolism; Glutamate metabolism; Trinitrotoluene degradation; Nitrogen metabolism; Two-component system - General; Oxidative phosphorylation; Methane metabolism; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF02754; PF00037; PF13237; PF13484; PF13534; PF12797; PF12800; PF12837; PF12838; PF13183;
pfam_desc Cysteine-rich domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S double cluster binding domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id CCG; Fer4; Fer4_10; Fer4_16; Fer4_17; Fer4_2; Fer4_4; Fer4_6; Fer4_7; Fer4_8;
pfam_target db:Pfam-A.hmm|PF02754.16 evalue:1.3e-27 score:95.0 best_domain_score:51.5 name:CCG; db:Pfam-A.hmm|PF00037.27 evalue:8e-09 score:34.2 best_domain_score:22.6 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:1.4e-06 score:27.6 best_domain_score:21.8 name:Fer4_10; db:Pfam-A.hmm|PF13484.6 evalue:2.9e-08 score:33.7 best_domain_score:32.8 name:Fer4_16; db:Pfam-A.hmm|PF13534.6 evalue:1.9e-11 score:43.6 best_domain_score:42.7 name:Fer4_17; db:Pfam-A.hmm|PF12797.7 evalue:1.8e-08 score:33.2 best_domain_score:21.6 name:Fer4_2; db:Pfam-A.hmm|PF12800.7 evalue:2.5e-07 score:29.9 best_domain_score:20.0 name:Fer4_4; db:Pfam-A.hmm|PF12837.7 evalue:5.2e-07 score:28.7 best_domain_score:21.5 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:1.8e-13 score:50.1 best_domain_score:49.0 name:Fer4_7; db:Pfam-A.hmm|PF13183.6 evalue:5e-12 score:45.3 best_domain_score:44.2 name:Fer4_8;
sprot_desc Probable glycolate oxidase iron-sulfur subunit;
sprot_id sp|P94534|GLCF_BACSU;
sprot_target db:uniprot_sprot|sp|P94534|GLCF_BACSU 2 421 evalue:3.7e-65 qcov:98.10 identity:36.10;
31997 32833 CDS
ID metaerg.pl|10031
allko_ids K06957;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000010.1_48 6 258 evalue:5.0e-64 qcov:91.00 identity:49.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF00583;
pfam_desc Acetyltransferase (GNAT) family;
pfam_id Acetyltransf_1;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:3.4e-09 score:36.2 best_domain_score:35.5 name:Acetyltransf_1;
32900 34165 CDS
ID metaerg.pl|10032
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__QHCF01;g__QHCF01;s__QHCF01 sp003244275;
genomedb_acc GCA_003244275.1;
genomedb_target db:genomedb|GCA_003244275.1|PZS22872.1 14 410 evalue:1.2e-122 qcov:94.30 identity:58.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
34162 35268 CDS
ID metaerg.pl|10033
allec_ids 4.2.1.113;
allgo_ids GO:0016836; GO:0000287; GO:0009234;
allko_ids K01781; K01684; K01856; K02549;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000010.1_46 1 367 evalue:4.3e-132 qcov:99.70 identity:63.80;
kegg_pathway_id 00052; 00130; 00364; 00362; 00622;
kegg_pathway_name Galactose metabolism; Ubiquinone biosynthesis; Fluorobenzoate degradation; Benzoate degradation via hydroxylation; Toluene and xylene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metacyc_pathway_id PWY-5898; PWY-5838; PWY-5861; PWY-5899; PWY-5863; PWY-5850; PWY-5845; PWY-5862; PWY-5896; PWY-5791; PWY-5860; ALL-CHORISMATE-PWY; PWY-5897; PWY-5837; PWY-5840;
metacyc_pathway_name superpathway of menaquinol-12 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; ; superpathway of demethylmenaquinol-6 biosynthesis I;; superpathway of chorismate metabolism;; superpathway of menaquinol-11 biosynthesis;; 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of menaquinol-7 biosynthesis;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; ; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; DHNA-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF13378; PF02746;
pfam_desc Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain;
pfam_id MR_MLE_C; MR_MLE_N;
pfam_target db:Pfam-A.hmm|PF13378.6 evalue:1.8e-42 score:144.6 best_domain_score:144.2 name:MR_MLE_C; db:Pfam-A.hmm|PF02746.16 evalue:8e-16 score:57.5 best_domain_score:56.8 name:MR_MLE_N;
sprot_desc o-succinylbenzoate synthase;
sprot_id sp|O34514|MENC_BACSU;
sprot_target db:uniprot_sprot|sp|O34514|MENC_BACSU 1 350 evalue:4.9e-98 qcov:95.10 identity:49.90;
tigrfam_acc TIGR01928;
tigrfam_desc o-succinylbenzoate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name menC_lowGC/arch;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR01928 evalue:4.9e-106 score:353.6 best_domain_score:353.2 name:TIGR01928;
35365 37128 CDS
ID metaerg.pl|10034
allec_ids 3.5.1.81;
allgo_ids GO:0016787; GO:0005737; GO:0047420;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__HRBIN33;s__HRBIN33 sp002923375;
genomedb_acc GCA_002923375.1;
genomedb_target db:genomedb|GCA_002923375.1|GBD33303.1 36 581 evalue:3.5e-160 qcov:93.00 identity:50.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:2.8e-07 score:29.4 best_domain_score:18.8 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:1.1e-16 score:60.6 best_domain_score:39.1 name:Amidohydro_3;
sp YES;
sprot_desc D-aminoacylase;
sprot_id sp|P72349|NDAD_ALCXX;
sprot_target db:uniprot_sprot|sp|P72349|NDAD_ALCXX 49 574 evalue:3.4e-69 qcov:89.60 identity:35.10;
tm_num 1;
35365 35442 signal_peptide
ID metaerg.pl|10035
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
35365 37128 transmembrane_helix
ID metaerg.pl|10036
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i35383-35451o;
37766 37146 CDS
ID metaerg.pl|10037
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000054.1_8 26 204 evalue:1.5e-41 qcov:86.90 identity:50.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
sp YES;
37146 37205 signal_peptide
ID metaerg.pl|10038
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
39598 37802 CDS
ID metaerg.pl|10039
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000054.1_9 37 598 evalue:1.1e-111 qcov:94.00 identity:40.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
sp YES;
37802 37945 signal_peptide
ID metaerg.pl|10040
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
40953 39595 CDS
ID metaerg.pl|10041
allgo_ids GO:0005524; GO:0005737; GO:0000156; GO:0043565; GO:0008134; GO:0009399; GO:0006808; GO:0006355;
allko_ids K07644; K07709; K06379; K07676; K10681; K01769; K07675; K07717; K07647; K04757; K10125; K11357; K12767; K02486; K13761; K11383; K07769; K07710; K01768; K02489; K07716; K08479; K10916; K02668; K03388; K10715; K07678; K11527; K02030; K07653; K07636; K02482; K02480; K11356; K11640; K00760; K02484; K07642; K11711; K02491; K11231; K07704; K01937; K08282; K07708; K07645; K07677; K07652; K07641; K07646; K08475; K07639; K07673; K01120; K03407; K07637; K07654; K07682; K07651; K07679; K02478; K07648; K07711; K07778; K11354; K07768; K07712;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000054.1_10 1 448 evalue:1.7e-162 qcov:99.10 identity:67.20;
kegg_pathway_id 00240; 00230; 05111; 00983; 00790; 03090; 02020; 04011;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Drug metabolism - other enzymes; Folate biosynthesis; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF00004; PF07728; PF02954; PF01078; PF00072; PF00158; PF14532;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); Bacterial regulatory protein, Fis family; Magnesium chelatase, subunit ChlI; Response regulator receiver domain; Sigma-54 interaction domain; Sigma-54 interaction domain;
pfam_id AAA; AAA_5; HTH_8; Mg_chelatase; Response_reg; Sigma54_activat; Sigma54_activ_2;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:5.2e-05 score:22.9 best_domain_score:21.9 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:9.2e-07 score:28.2 best_domain_score:27.1 name:AAA_5; db:Pfam-A.hmm|PF02954.19 evalue:1.5e-10 score:39.9 best_domain_score:31.9 name:HTH_8; db:Pfam-A.hmm|PF01078.21 evalue:3.3e-07 score:29.1 best_domain_score:21.1 name:Mg_chelatase; db:Pfam-A.hmm|PF00072.24 evalue:2.4e-24 score:84.9 best_domain_score:84.0 name:Response_reg; db:Pfam-A.hmm|PF00158.26 evalue:1.5e-65 score:219.3 best_domain_score:218.5 name:Sigma54_activat; db:Pfam-A.hmm|PF14532.6 evalue:1.7e-19 score:69.5 best_domain_score:68.2 name:Sigma54_activ_2;
sprot_desc DNA-binding transcriptional regulator NtrC;
sprot_id sp|Q04848|NTRC_AZOC5;
sprot_target db:uniprot_sprot|sp|Q04848|NTRC_AZOC5 2 451 evalue:2.9e-92 qcov:99.60 identity:41.90;
42242 40950 CDS
ID metaerg.pl|10042
allgo_ids GO:0000155; GO:0007165;
allko_ids K07642; K11711; K11640; K11356; K02484; K08282; K07704; K07677; K07708; K07645; K02491; K07643; K07637; K03407; K07649; K00936; K07682; K07654; K07652; K07673; K08475; K07639; K07646; K13598; K07641; K11328; K13533; K08884; K07711; K07768; K11633; K07778; K07698; K07718; K07651; K07648; K02478; K07676; K10681; K06379; K07650; K01769; K07644; K13532; K07709; K11357; K10125; K11629; K04757; K11520; K07769; K02486; K11383; K12767; K07717; K07675; K10942; K13040; K07647; K10916; K07674; K08479; K03388; K02668; K01768; K07656; K07640; K07710; K07716; K07697; K02489; K07636; K07638; K07653; K02480; K02482; K08801; K07655; K07678; K10715; K13587; K02030; K11527;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000054.1_11 16 420 evalue:3.2e-86 qcov:94.20 identity:47.70;
kegg_pathway_id 05111; 00230; 00790; 03090; 02020;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Folate biosynthesis; Type II secretion system; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF02518; PF13581; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-like ATPase domain; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HATPase_c_2; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:5.6e-18 score:64.7 best_domain_score:64.1 name:HATPase_c; db:Pfam-A.hmm|PF13581.6 evalue:4.7e-07 score:29.0 best_domain_score:27.7 name:HATPase_c_2; db:Pfam-A.hmm|PF00512.25 evalue:4.4e-08 score:32.3 best_domain_score:30.2 name:HisKA;
tm_num 2;
42242 40950 transmembrane_helix
ID metaerg.pl|10043
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology o41019-41087i41277-41345o;
44314 42449 CDS
ID metaerg.pl|10044
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000054.1_12 16 615 evalue:6.3e-168 qcov:96.60 identity:55.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF12773; PF00437; PF05157;
pfam_desc Double zinc ribbon; Type II/IV secretion system protein; Type II secretion system (T2SS), protein E, N-terminal domain;
pfam_id DZR; T2SSE; T2SSE_N;
pfam_target db:Pfam-A.hmm|PF12773.7 evalue:1e-06 score:27.9 best_domain_score:27.9 name:DZR; db:Pfam-A.hmm|PF00437.20 evalue:1.6e-67 score:226.7 best_domain_score:226.2 name:T2SSE; db:Pfam-A.hmm|PF05157.15 evalue:1.3e-20 score:72.9 best_domain_score:71.7 name:T2SSE_N;
44870 44400 CDS
ID metaerg.pl|10045
allgo_ids GO:0003824; GO:0046872;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000054.1_13 2 153 evalue:5.8e-38 qcov:97.40 identity:57.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF01676; PF01663;
pfam_desc Metalloenzyme superfamily; Type I phosphodiesterase / nucleotide pyrophosphatase;
pfam_id Metalloenzyme; Phosphodiest;
pfam_target db:Pfam-A.hmm|PF01676.18 evalue:5.2e-10 score:38.3 best_domain_score:38.2 name:Metalloenzyme; db:Pfam-A.hmm|PF01663.22 evalue:8.3e-08 score:31.4 best_domain_score:31.2 name:Phosphodiest;
45905 45354 CDS
ID metaerg.pl|10046
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000010.1_44 1 181 evalue:3.5e-58 qcov:98.90 identity:62.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
46165 47205 CDS
ID metaerg.pl|10047
genomedb_OC d__Bacteria;p__Planctomycetota;c__Planctomycetes;o__Gemmatales;f__Gemmataceae;g__Gemmata;s__Gemmata obscuriglobus;
genomedb_acc GCF_000171775.1;
genomedb_target db:genomedb|GCF_000171775.1|WP_010051049.1 5 332 evalue:8.3e-61 qcov:94.80 identity:41.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
47202 47870 CDS
ID metaerg.pl|10048
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000054.1_16 7 220 evalue:7.6e-23 qcov:96.40 identity:40.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF04893;
pfam_desc Yip1 domain;
pfam_id Yip1;
pfam_target db:Pfam-A.hmm|PF04893.17 evalue:6.9e-10 score:38.1 best_domain_score:37.5 name:Yip1;
tm_num 5;
47202 47870 transmembrane_helix
ID metaerg.pl|10049
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i47292-47360o47472-47540i47574-47642o47700-47768i47805-47864o;
48435 47941 CDS
ID metaerg.pl|10050
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000010.1_31 10 163 evalue:5.2e-37 qcov:93.90 identity:55.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF02643;
pfam_desc Uncharacterized ACR, COG1430;
pfam_id DUF192;
pfam_target db:Pfam-A.hmm|PF02643.15 evalue:2.2e-33 score:113.5 best_domain_score:113.2 name:DUF192;
sp YES;
47941 48000 lipoprotein_signal_peptide
ID metaerg.pl|10051
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
48637 48894 CDS
ID metaerg.pl|10052
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002313925;
genomedb_acc GCA_002313925.1;
genomedb_target db:genomedb|GCA_002313925.1|DCAZ01000148.1_4 1 81 evalue:1.0e-20 qcov:95.30 identity:60.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF03966;
pfam_desc Trm112p-like protein;
pfam_id Trm112p;
pfam_target db:Pfam-A.hmm|PF03966.16 evalue:3e-05 score:23.7 best_domain_score:22.5 name:Trm112p;
49106 50272 CDS
ID metaerg.pl|10053
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0005507; GO:0016020; GO:0016021; GO:0005886; GO:0070469; GO:0020037;
allko_ids K02275;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89535.1 10 388 evalue:5.6e-90 qcov:97.70 identity:46.80;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metabolic_acc TIGR02866;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, caa3-type;gene:CoxB;;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00116; PF02790; PF00034;
pfam_desc Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; Cytochrome c;
pfam_id COX2; COX2_TM; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF00116.20 evalue:4.1e-17 score:61.4 best_domain_score:54.5 name:COX2; db:Pfam-A.hmm|PF02790.15 evalue:9.2e-10 score:37.8 best_domain_score:37.1 name:COX2_TM; db:Pfam-A.hmm|PF00034.21 evalue:9.3e-10 score:38.8 best_domain_score:37.7 name:Cytochrom_C;
sp YES;
sprot_desc Cytochrome c oxidase subunit 2;
sprot_id sp|Q04441|COX2_BACPE;
sprot_target db:uniprot_sprot|sp|Q04441|COX2_BACPE 12 388 evalue:2.3e-53 qcov:97.20 identity:33.20;
tigrfam_acc TIGR02866;
tigrfam_desc cytochrome c oxidase, subunit II;
tigrfam_mainrole Energy metabolism;
tigrfam_name CoxB;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02866 evalue:4.4e-57 score:192.1 best_domain_score:191.7 name:TIGR02866;
tm_num 3;
49106 49159 lipoprotein_signal_peptide
ID metaerg.pl|10054
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
49106 50272 transmembrane_helix
ID metaerg.pl|10055
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i49109-49177o49235-49303i49364-49432o;
50316 52154 CDS
ID metaerg.pl|10056
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0009060; GO:0016021; GO:0020037; GO:0055114; GO:0005886; GO:0070469; GO:0046872; GO:0015990; GO:0006119;
allko_ids K02274;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-544;s__SZUA-544 sp003251175;
genomedb_acc GCA_003251175.1;
genomedb_target db:genomedb|GCA_003251175.1|QKHC01000141.1_14 20 606 evalue:4.7e-216 qcov:95.90 identity:61.80;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metabolic_acc TIGR02891;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, caa3-type;gene:CoxA;;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00115;
pfam_desc Cytochrome C and Quinol oxidase polypeptide I;
pfam_id COX1;
pfam_target db:Pfam-A.hmm|PF00115.20 evalue:6.2e-154 score:512.2 best_domain_score:512.2 name:COX1;
sprot_desc Cytochrome c oxidase subunit 1;
sprot_id sp|P24010|COX1_BACSU;
sprot_target db:uniprot_sprot|sp|P24010|COX1_BACSU 22 576 evalue:4.1e-174 qcov:90.70 identity:53.10;
tigrfam_acc TIGR02891;
tigrfam_desc cytochrome c oxidase, subunit I;
tigrfam_mainrole Energy metabolism;
tigrfam_name CtaD_CoxA;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02891 evalue:4.4e-217 score:720.8 best_domain_score:720.8 name:TIGR02891;
tm_num 13;
50316 52154 transmembrane_helix
ID metaerg.pl|10057
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i50415-50483o50556-50624i50661-50729o50805-50873i50934-51002o51060-51128i51162-51230o51273-51341i51378-51446o51489-51557i51591-51659o51717-51785i52059-52127o;
52199 52789 CDS
ID metaerg.pl|10058
allec_ids 1.9.3.1;
allgo_ids GO:0015002; GO:0016020; GO:0016021; GO:0005886; GO:0004129; GO:0019646;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91414.1 10 195 evalue:3.8e-50 qcov:94.90 identity:55.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00510;
pfam_desc Cytochrome c oxidase subunit III;
pfam_id COX3;
pfam_target db:Pfam-A.hmm|PF00510.18 evalue:2.6e-20 score:72.6 best_domain_score:71.2 name:COX3;
sprot_desc Cytochrome c oxidase subunit 3;
sprot_id sp|Q03439|COX3_BACP3;
sprot_target db:uniprot_sprot|sp|Q03439|COX3_BACP3 5 195 evalue:1.1e-27 qcov:97.40 identity:37.20;
tm_num 5;
52199 52789 transmembrane_helix
ID metaerg.pl|10059
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i52259-52327o52370-52438i52475-52543o52622-52678i52715-52783o;
52801 53145 CDS
ID metaerg.pl|10060
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA1151;f__TMED-70;g__GCA-2721615;s__GCA-2721615 sp002721615;
genomedb_acc GCA_002721615.1;
genomedb_target db:genomedb|GCA_002721615.1|MBM32239.1 19 106 evalue:2.4e-12 qcov:77.20 identity:50.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF03626;
pfam_desc Prokaryotic Cytochrome C oxidase subunit IV;
pfam_id COX4_pro;
pfam_target db:Pfam-A.hmm|PF03626.14 evalue:3.5e-11 score:42.6 best_domain_score:42.6 name:COX4_pro;
tm_num 3;
52801 53145 transmembrane_helix
ID metaerg.pl|10061
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology o52870-52938i52957-53025o53053-53121i;
53208 54098 CDS
ID metaerg.pl|10062
allgo_ids GO:0016021; GO:0005886;
allko_ids K02862;
genomedb_OC d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__GWA2-73-35;g__UBA12499;s__UBA12499 sp001788395;
genomedb_acc GCA_001788395.1;
genomedb_target db:genomedb|GCA_001788395.1|OGK77226.1 31 274 evalue:6.9e-64 qcov:82.40 identity:54.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF09678;
pfam_desc Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG);
pfam_id Caa3_CtaG;
pfam_target db:Pfam-A.hmm|PF09678.10 evalue:6.6e-61 score:205.0 best_domain_score:204.6 name:Caa3_CtaG;
sprot_desc hypothetical protein;
sprot_id sp|O34329|CTAG_BACSU;
sprot_target db:uniprot_sprot|sp|O34329|CTAG_BACSU 22 286 evalue:3.2e-23 qcov:89.50 identity:29.00;
tm_num 7;
53208 54098 transmembrane_helix
ID metaerg.pl|10063
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology o53277-53345i53406-53474o53502-53570i53607-53675o53718-53777i53814-53882o53961-54029i;
54139 54921 CDS
ID metaerg.pl|10064
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__GCA-2718595;s__GCA-2718595 sp002718595;
genomedb_acc GCA_002718595.1;
genomedb_target db:genomedb|GCA_002718595.1|MBI71617.1 20 260 evalue:1.7e-29 qcov:92.70 identity:33.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF04338;
pfam_desc Protein of unknown function, DUF481;
pfam_id DUF481;
pfam_target db:Pfam-A.hmm|PF04338.12 evalue:2.8e-17 score:62.7 best_domain_score:62.5 name:DUF481;
sp YES;
tm_num 1;
54139 54228 signal_peptide
ID metaerg.pl|10065
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
54139 54921 transmembrane_helix
ID metaerg.pl|10066
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i54157-54225o;
55776 54922 CDS
ID metaerg.pl|10067
allec_ids 5.1.-.-;
allgo_ids GO:0003824; GO:0009058; GO:0016853;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000013.1_84 10 281 evalue:7.3e-63 qcov:95.80 identity:55.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF02567;
pfam_desc Phenazine biosynthesis-like protein;
pfam_id PhzC-PhzF;
pfam_target db:Pfam-A.hmm|PF02567.16 evalue:2.5e-55 score:187.2 best_domain_score:185.6 name:PhzC-PhzF;
sprot_desc Uncharacterized isomerase PA3578;
sprot_id sp|Q9HY42|Y3578_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HY42|Y3578_PSEAE 9 283 evalue:1.7e-45 qcov:96.80 identity:47.50;
tigrfam_acc TIGR00654;
tigrfam_desc phenazine biosynthesis protein, PhzF family;
tigrfam_mainrole Cellular processes;
tigrfam_name PhzF_family;
tigrfam_sub1role Toxin production and resistance;
tigrfam_target db:TIGRFAMs.hmm|TIGR00654 evalue:1.1e-35 score:122.6 best_domain_score:121.5 name:TIGR00654;
57068 55773 CDS
ID metaerg.pl|10068
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000069.1_51 1 423 evalue:2.3e-185 qcov:98.10 identity:73.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF13519;
pfam_desc von Willebrand factor type A domain;
pfam_id VWA_2;
pfam_target db:Pfam-A.hmm|PF13519.6 evalue:8.4e-08 score:32.1 best_domain_score:28.8 name:VWA_2;
57103 58269 CDS
ID metaerg.pl|10069
allec_ids 3.2.2.31; 3.2.2.-;
allgo_ids GO:0003677; GO:0051539; GO:0019104; GO:0046872; GO:0006284;
allko_ids K10801; K01741; K03660; K03575; K10773;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90581.1 9 378 evalue:1.8e-96 qcov:95.40 identity:51.40;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metacyc_pathway_id PWY-2681; PWY-5381;
metacyc_pathway_name trans-zeatin biosynthesis;; pyridine nucleotide cycling (plants);;
metacyc_pathway_type CYTOKININ-BIOSYNTHESIS;; NAD-Metabolism;;
pfam_acc PF00633; PF00730; PF14815;
pfam_desc Helix-hairpin-helix motif; HhH-GPD superfamily base excision DNA repair protein; NUDIX domain;
pfam_id HHH; HhH-GPD; NUDIX_4;
pfam_target db:Pfam-A.hmm|PF00633.23 evalue:2.4e-07 score:29.5 best_domain_score:28.5 name:HHH; db:Pfam-A.hmm|PF00730.25 evalue:5.4e-19 score:67.9 best_domain_score:67.3 name:HhH-GPD; db:Pfam-A.hmm|PF14815.6 evalue:4.5e-17 score:61.3 best_domain_score:60.4 name:NUDIX_4;
sprot_desc Adenine DNA glycosylase;
sprot_id sp|P83847|MUTY_GEOSE;
sprot_target db:uniprot_sprot|sp|P83847|MUTY_GEOSE 14 376 evalue:7.2e-68 qcov:93.60 identity:40.10;
tigrfam_acc TIGR01084;
tigrfam_desc A/G-specific adenine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name mutY;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01084 evalue:1.9e-94 score:315.4 best_domain_score:315.1 name:TIGR01084;
58309 59265 CDS
ID metaerg.pl|10070
genomedb_OC d__Bacteria;p__Planctomycetota;c__Planctomycetes;o__Gemmatales;f__Gemmataceae;g__UBA4732;s__UBA4732 sp002404095;
genomedb_acc GCA_002404095.1;
genomedb_target db:genomedb|GCA_002404095.1|DHJA01000084.1_21 1 313 evalue:8.8e-49 qcov:98.40 identity:42.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:7.9e-52 score:174.7 best_domain_score:88.0 name:Usp;
59507 60442 CDS
ID metaerg.pl|10071
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000207.1_44 1 306 evalue:2.1e-39 qcov:98.40 identity:38.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:4.8e-54 score:181.9 best_domain_score:98.6 name:Usp;
sprot_desc Universal stress protein MSMEG_3950/MSMEI_3859;
sprot_id sp|A0QZA1|Y3950_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QZA1|Y3950_MYCS2 5 306 evalue:4.6e-17 qcov:97.10 identity:29.30;
61895 60513 CDS
ID metaerg.pl|10072
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000028.1_186 1 454 evalue:1.3e-194 qcov:98.70 identity:75.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
62212 63891 CDS
ID metaerg.pl|10073
allec_ids 1.5.5.1;
allgo_ids GO:0031305; GO:0051539; GO:0009055; GO:0004174; GO:0046872; GO:0043783; GO:0048039; GO:0022904;
allko_ids K00311;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000069.1_58 11 559 evalue:4.1e-235 qcov:98.20 identity:70.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF05187; PF00890;
pfam_desc Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; FAD binding domain;
pfam_id ETF_QO; FAD_binding_2;
pfam_target db:Pfam-A.hmm|PF05187.13 evalue:3.7e-13 score:48.7 best_domain_score:47.9 name:ETF_QO; db:Pfam-A.hmm|PF00890.24 evalue:1.5e-06 score:26.8 best_domain_score:14.9 name:FAD_binding_2;
sprot_desc Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial;
sprot_id sp|Q337B8|ETFQO_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q337B8|ETFQO_ORYSJ 30 559 evalue:8.7e-91 qcov:94.80 identity:36.20;
63907 64179 CDS
ID metaerg.pl|10074
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__QHXM01;s__QHXM01 sp003222945;
genomedb_acc GCA_003222945.1;
genomedb_target db:genomedb|GCA_003222945.1|PYS46476.1 1 90 evalue:5.6e-25 qcov:100.00 identity:63.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF04226;
pfam_desc Transglycosylase associated protein;
pfam_id Transgly_assoc;
pfam_target db:Pfam-A.hmm|PF04226.13 evalue:5.4e-06 score:25.8 best_domain_score:25.8 name:Transgly_assoc;
tm_num 3;
63907 64179 transmembrane_helix
ID metaerg.pl|10075
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology o63916-63975i63994-64053o64096-64164i;
64451 65596 CDS
ID metaerg.pl|10076
allgo_ids GO:0015562; GO:0055085; GO:0019898; GO:1990195; GO:0005886; GO:0022857; GO:0046618; GO:0046677;
allko_ids K13888;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter sp001564065;
genomedb_acc GCA_001564065.1;
genomedb_target db:genomedb|GCA_001564065.1|LKNA01000007.1_28 1 381 evalue:3.7e-126 qcov:100.00 identity:64.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF13533; PF13437; PF16576; PF02321;
pfam_desc Biotin-lipoyl like; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion; Outer membrane efflux protein;
pfam_id Biotin_lipoyl_2; HlyD_3; HlyD_D23; OEP;
pfam_target db:Pfam-A.hmm|PF13533.6 evalue:7.1e-13 score:47.4 best_domain_score:43.5 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:3.8e-16 score:59.0 best_domain_score:46.5 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:2.4e-21 score:75.2 best_domain_score:74.8 name:HlyD_D23; db:Pfam-A.hmm|PF02321.18 evalue:3.1e-05 score:23.1 best_domain_score:22.4 name:OEP;
sp YES;
sprot_desc Macrolide export protein MacA;
sprot_id sp|P58411|MACA_YERPE;
sprot_target db:uniprot_sprot|sp|P58411|MACA_YERPE 44 358 evalue:6.3e-16 qcov:82.70 identity:23.70;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:1.9e-52 score:177.4 best_domain_score:176.9 name:TIGR01730;
tm_num 1;
64451 64534 signal_peptide
ID metaerg.pl|10077
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
64451 65596 transmembrane_helix
ID metaerg.pl|10078
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i64469-64528o;
65690 66496 CDS
ID metaerg.pl|10079
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0022857; GO:0055085;
allko_ids K02017; K02032; K11084; K02004; K02006; K02052; K05847; K02010; K02003; K01997; K02068; K11072; K02045; K09810; K01996; K02071; K06861; K11076; K05816; K06857; K01998; K10112; K10111; K02031; K02049; K02065; K01995; K11962; K02000; K10000; K02018; K02023; K09812; K10243;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter sp001564065;
genomedb_acc GCA_001564065.1;
genomedb_target db:genomedb|GCA_001564065.1|LKNA01000007.1_29 1 245 evalue:9.0e-87 qcov:91.40 identity:65.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metacyc_pathway_id PWY-6171; PWY-6135; PWY-6188; PWY-6166; PWYG-321; PWY-6113;
metacyc_pathway_name ; ; ; ; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:8.9e-08 score:31.5 best_domain_score:17.8 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:5.6e-33 score:113.6 best_domain_score:113.1 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YvrO;
sprot_id sp|O34979|YVRO_BACSU;
sprot_target db:uniprot_sprot|sp|O34979|YVRO_BACSU 3 227 evalue:5.5e-67 qcov:84.00 identity:58.20;
66493 67710 CDS
ID metaerg.pl|10080
allec_ids 3.6.3.-;
allgo_ids GO:0016020; GO:0016021; GO:0005886; GO:0005524; GO:0016887; GO:0015562; GO:0015893; GO:0046677;
allko_ids K02004; K09808; K05685;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter sp001564065;
genomedb_acc GCA_001564065.1;
genomedb_target db:genomedb|GCA_001564065.1|LKNA01000007.1_30 1 405 evalue:1.5e-189 qcov:100.00 identity:84.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-6166; PWY-6188; PWY-6171; PWY-6135;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; ; ; ; ;
pfam_acc PF02687; PF12704;
pfam_desc FtsX-like permease family; MacB-like periplasmic core domain;
pfam_id FtsX; MacB_PCD;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:1.2e-09 score:37.7 best_domain_score:37.7 name:FtsX; db:Pfam-A.hmm|PF12704.7 evalue:1.5e-38 score:132.4 best_domain_score:132.4 name:MacB_PCD;
sprot_desc Macrolide export ATP-binding/permease protein MacB;
sprot_id sp|A0LM36|MACB_SYNFM;
sprot_target db:uniprot_sprot|sp|A0LM36|MACB_SYNFM 8 405 evalue:5.6e-79 qcov:98.30 identity:38.70;
tm_num 4;
66493 67710 transmembrane_helix
ID metaerg.pl|10081
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i66553-66621o67345-67413i67474-67542o67585-67653i;
68768 67776 CDS
ID metaerg.pl|10082
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Thermosynechococcales;f__Thermosynechococcaceae;g__Acaryochloris;s__Acaryochloris sp000238775;
genomedb_acc GCF_000238775.1;
genomedb_target db:genomedb|GCF_000238775.1|WP_010477852.1 1 330 evalue:2.6e-59 qcov:100.00 identity:39.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
69466 69702 CDS
ID metaerg.pl|10083
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
70337 71026 CDS
ID metaerg.pl|10084
allec_ids 1.1.1.300;
allgo_ids GO:0005743; GO:0005739; GO:0052650; GO:0042462; GO:0009644; GO:0010842; GO:0042574;
allko_ids K11161;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04515.1 1 222 evalue:2.0e-74 qcov:96.90 identity:67.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF00106; PF13561;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase;
pfam_id adh_short; adh_short_C2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:3.6e-22 score:78.0 best_domain_score:76.4 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:9.7e-16 score:57.3 best_domain_score:56.5 name:adh_short_C2;
sprot_desc Retinol dehydrogenase 13;
sprot_id sp|Q8CEE7|RDH13_MOUSE;
sprot_target db:uniprot_sprot|sp|Q8CEE7|RDH13_MOUSE 21 228 evalue:1.9e-28 qcov:90.80 identity:39.70;
71216 72832 CDS
ID metaerg.pl|10085
allgo_ids GO:0016787;
allko_ids K01468;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000002.1_112 3 524 evalue:3.0e-198 qcov:97.00 identity:62.10;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:8.2e-13 score:47.6 best_domain_score:23.4 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:2.3e-11 score:43.1 best_domain_score:28.9 name:Amidohydro_3;
sp YES;
71216 71290 signal_peptide
ID metaerg.pl|10086
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
75294 72892 CDS
ID metaerg.pl|10087
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF13428;
pfam_desc Tetratricopeptide repeat;
pfam_id TPR_14;
pfam_target db:Pfam-A.hmm|PF13428.6 evalue:2.5e-06 score:27.1 best_domain_score:11.5 name:TPR_14;
tm_num 3;
75294 72892 transmembrane_helix
ID metaerg.pl|10088
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i72928-72984o73027-73095i73321-73389o;
75520 77922 CDS
ID metaerg.pl|10089
allec_ids 3.5.1.97;
allgo_ids GO:0016787; GO:0017000; GO:0042597; GO:0016811; GO:0009372;
allko_ids K07116;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06078.1 5 800 evalue:7.7e-243 qcov:99.50 identity:54.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF01804;
pfam_desc Penicillin amidase;
pfam_id Penicil_amidase;
pfam_target db:Pfam-A.hmm|PF01804.18 evalue:1.7e-181 score:604.9 best_domain_score:604.7 name:Penicil_amidase;
sp YES;
sprot_desc Acyl-homoserine lactone acylase QuiP;
sprot_id sp|Q9I4U2|QUIP_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I4U2|QUIP_PSEAE 57 798 evalue:8.5e-63 qcov:92.80 identity:26.90;
75520 75636 lipoprotein_signal_peptide
ID metaerg.pl|10090
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
78095 82726 CDS
ID metaerg.pl|10091
allgo_ids GO:0004181; GO:0006508; GO:0008270;
genomedb_OC d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__SG8-4;f__SM23-30;g__SM23-30;s__SM23-30 sp001303695;
genomedb_acc GCA_001303695.1;
genomedb_target db:genomedb|GCA_001303695.1|KPK77923.1 28 1535 evalue:2.3e-299 qcov:97.70 identity:38.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF00246;
pfam_desc Zinc carboxypeptidase;
pfam_id Peptidase_M14;
pfam_target db:Pfam-A.hmm|PF00246.24 evalue:4.4e-11 score:42.3 best_domain_score:40.9 name:Peptidase_M14;
sp YES;
78095 78256 signal_peptide
ID metaerg.pl|10092
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
83390 82746 CDS
ID metaerg.pl|10093
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90458.1 1 167 evalue:3.6e-30 qcov:78.00 identity:49.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
pfam_acc PF02308;
pfam_desc MgtC family;
pfam_id MgtC;
pfam_target db:Pfam-A.hmm|PF02308.16 evalue:7.3e-36 score:122.4 best_domain_score:122.1 name:MgtC;
sp YES;
tm_num 3;
82746 82826 signal_peptide
ID metaerg.pl|10094
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
83390 82746 transmembrane_helix
ID metaerg.pl|10095
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0126526; 13.7267; 1.65781; 12.0562; ;
topology i82749-82802o82935-82988i83025-83093o;
>Feature NODE_73_length_83636_cov_13.2916
451 2 CDS
ID metaerg.pl|10096
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE46993.1 2 149 evalue:2.8e-29 qcov:98.70 identity:47.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
1161 448 CDS
ID metaerg.pl|10097
allgo_ids GO:0005829; GO:0016740; GO:0009846; GO:0009860; GO:0007338;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092886543.1 8 234 evalue:5.4e-120 qcov:95.80 identity:88.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
sprot_desc hypothetical protein;
sprot_id sp|Q9XIP8|CDI_ARATH;
sprot_target db:uniprot_sprot|sp|Q9XIP8|CDI_ARATH 4 234 evalue:5.2e-77 qcov:97.50 identity:54.70;
2609 1299 CDS
ID metaerg.pl|10098
allec_ids 2.4.99.12;
allgo_ids GO:0005739; GO:0005886; GO:0016740; GO:0016757; GO:0036104; GO:0009245;
allko_ids K02527;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE46995.1 5 434 evalue:2.4e-145 qcov:98.60 identity:62.10;
kegg_pathway_id 00540; 01031;
kegg_pathway_name Lipopolysaccharide biosynthesis; Glycan structures - biosynthesis 2;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-6467; KDO-NAGLIPASYN-PWY; LPSSYN-PWY; KDOSYN-PWY;
metacyc_pathway_name Kdo transfer to lipid IVA III (Chlamydia);; superpathway of (Kdo)2-lipid A biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; Kdo transfer to lipid IVA I;;
metacyc_pathway_type KDO-Lipid-IV-Transfer; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; KDO-Lipid-IV-Transfer;;
pfam_acc PF04413;
pfam_desc 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase);
pfam_id Glycos_transf_N;
pfam_target db:Pfam-A.hmm|PF04413.16 evalue:4e-47 score:159.4 best_domain_score:158.3 name:Glycos_transf_N;
sprot_desc Probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial;
sprot_id sp|Q8VZA5|KDTA_ARATH;
sprot_target db:uniprot_sprot|sp|Q8VZA5|KDTA_ARATH 9 367 evalue:1.1e-43 qcov:82.30 identity:32.50;
2884 4050 CDS
ID metaerg.pl|10099
allec_ids 2.6.1.9;
allgo_ids GO:0009058; GO:0030170; GO:0004400; GO:0000105;
allko_ids K00817; K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08090.1 1 368 evalue:7.2e-154 qcov:94.80 identity:74.70;
kegg_pathway_id 00310; 00401; 00400; 00300; 00360; 00340; 00350;
kegg_pathway_name Lysine degradation; Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Lysine biosynthesis; Phenylalanine metabolism; Histidine metabolism; Tyrosine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id HISTSYN-PWY; PRPP-PWY;
metacyc_pathway_name L-histidine biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type HISTIDINE-SYN;; Super-Pathways;;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:7.7e-36 score:123.2 best_domain_score:123.0 name:Aminotran_1_2;
sprot_desc Histidinol-phosphate aminotransferase 2;
sprot_id sp|Q3AAT6|HIS82_CARHZ;
sprot_target db:uniprot_sprot|sp|Q3AAT6|HIS82_CARHZ 10 363 evalue:5.6e-44 qcov:91.20 identity:32.10;
5375 4245 CDS
ID metaerg.pl|10100
allgo_ids GO:0006415; GO:0005737; GO:0016149;
allko_ids K02836;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH30066.1 1 375 evalue:2.6e-177 qcov:99.70 identity:84.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF03462; PF00472;
pfam_desc PCRF domain; RF-1 domain;
pfam_id PCRF; RF-1;
pfam_target db:Pfam-A.hmm|PF03462.18 evalue:7e-56 score:188.4 best_domain_score:187.5 name:PCRF; db:Pfam-A.hmm|PF00472.20 evalue:1.5e-37 score:127.3 best_domain_score:127.3 name:RF-1;
sprot_desc Peptide chain release factor 2;
sprot_id sp|Q165J6|RF2_ROSDO;
sprot_target db:uniprot_sprot|sp|Q165J6|RF2_ROSDO 1 372 evalue:6.4e-162 qcov:98.90 identity:76.90;
tigrfam_acc TIGR00020;
tigrfam_desc peptide chain release factor 2;
tigrfam_mainrole Protein synthesis;
tigrfam_name prfB;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00020 evalue:5e-146 score:485.5 best_domain_score:485.3 name:TIGR00020;
5527 5603 tRNA
ID metaerg.pl|10101
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
name tRNA_Asp_gtc;
5940 7343 CDS
ID metaerg.pl|10102
allec_ids 6.3.2.9;
allgo_ids GO:0005524; GO:0009058; GO:0016874; GO:0005737; GO:0008764; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01928; K01925; K01924;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05996.1 1 465 evalue:2.2e-210 qcov:99.60 identity:80.60;
kegg_pathway_id 00550; 00471; 00300;
kegg_pathway_name Peptidoglycan biosynthesis; D-Glutamine and D-glutamate metabolism; Lysine biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-6385; PWY-5265; PWY-6387; PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6386; PWY-6470;
metacyc_pathway_name peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF02875; PF08245;
pfam_desc Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF02875.21 evalue:2.4e-07 score:30.2 best_domain_score:28.6 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:1e-29 score:103.2 best_domain_score:102.7 name:Mur_ligase_M;
sp YES;
sprot_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
sprot_id sp|A3PHS4|MURD_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PHS4|MURD_RHOS1 1 465 evalue:2.3e-201 qcov:99.60 identity:78.10;
tigrfam_acc TIGR01087;
tigrfam_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murD;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01087 evalue:8.3e-103 score:343.9 best_domain_score:343.8 name:TIGR01087;
5940 6011 lipoprotein_signal_peptide
ID metaerg.pl|10103
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
7340 8308 CDS
ID metaerg.pl|10104
allgo_ids GO:0016020; GO:0016021; GO:0005887;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05997.1 33 322 evalue:2.4e-110 qcov:90.10 identity:71.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:2.1e-21 score:75.8 best_domain_score:57.0 name:EamA;
sprot_desc hypothetical protein;
sprot_id sp|P83936|RARD_STREX;
sprot_target db:uniprot_sprot|sp|P83936|RARD_STREX 36 320 evalue:1.6e-52 qcov:88.50 identity:41.40;
tigrfam_acc TIGR00688;
tigrfam_desc protein RarD;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name rarD;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR00688 evalue:3.2e-52 score:176.7 best_domain_score:176.5 name:TIGR00688;
tm_num 10;
7340 8308 transmembrane_helix
ID metaerg.pl|10105
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology i7460-7513o7556-7609i7646-7714o7727-7795i7820-7873o7886-7945i7964-8032o8060-8128i8147-8215o8228-8296i;
8519 9691 CDS
ID metaerg.pl|10106
allec_ids 2.4.1.129;
allgo_ids GO:0016021; GO:0051301; GO:0005886; GO:0008955; GO:0007049; GO:0071555; GO:0009252; GO:0008360;
allko_ids K03588;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05998.1 1 388 evalue:6.5e-171 qcov:99.50 identity:78.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6470; PWY-6385; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01098;
pfam_desc Cell cycle protein;
pfam_id FTSW_RODA_SPOVE;
pfam_target db:Pfam-A.hmm|PF01098.19 evalue:4.1e-74 score:248.9 best_domain_score:248.8 name:FTSW_RODA_SPOVE;
sprot_desc Probable peptidoglycan glycosyltransferase FtsW;
sprot_id sp|B8H092|FTSW_CAUVN;
sprot_target db:uniprot_sprot|sp|B8H092|FTSW_CAUVN 12 380 evalue:8.9e-66 qcov:94.60 identity:40.50;
tm_num 8;
8519 9691 transmembrane_helix
ID metaerg.pl|10107
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology i8606-8674o8717-8770i8789-8857o9008-9076i9095-9163o9347-9415i9452-9520o9563-9631i;
9691 10857 CDS
ID metaerg.pl|10108
allec_ids 2.4.1.227;
allgo_ids GO:0005975; GO:0016758; GO:0030259; GO:0005886; GO:0051991; GO:0050511; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K02563;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05999.1 1 368 evalue:2.3e-139 qcov:94.80 identity:72.60;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6470; PWY-6385; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF03033; PF04101;
pfam_desc Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain;
pfam_id Glyco_transf_28; Glyco_tran_28_C;
pfam_target db:Pfam-A.hmm|PF03033.20 evalue:6.6e-27 score:93.5 best_domain_score:92.4 name:Glyco_transf_28; db:Pfam-A.hmm|PF04101.16 evalue:4e-31 score:107.5 best_domain_score:107.1 name:Glyco_tran_28_C;
sprot_desc UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;
sprot_id sp|A3PHS8|MURG_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PHS8|MURG_RHOS1 10 360 evalue:7.9e-123 qcov:90.50 identity:66.10;
10892 12325 CDS
ID metaerg.pl|10109
allec_ids 6.3.2.8;
allgo_ids GO:0005524; GO:0009058; GO:0005737; GO:0008763; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01928; K01924; K01929; K01925; K02558;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH29907.1 11 472 evalue:2.8e-176 qcov:96.90 identity:69.10;
kegg_pathway_id 00550; 00300; 00471;
kegg_pathway_name Peptidoglycan biosynthesis; Lysine biosynthesis; D-Glutamine and D-glutamate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-6385; PWY-5265; PWY-6387; PWY-6471; PWY-6386; PEPTIDOGLYCANSYN-PWY; PWY-6470;
metacyc_pathway_name peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01225; PF02875; PF08245;
pfam_desc Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase; Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF01225.25 evalue:3.6e-28 score:97.0 best_domain_score:93.1 name:Mur_ligase; db:Pfam-A.hmm|PF02875.21 evalue:4e-21 score:74.3 best_domain_score:68.2 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:3e-27 score:95.1 best_domain_score:94.7 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramate--L-alanine ligase;
sprot_id sp|A3PHS9|MURC_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PHS9|MURC_RHOS1 13 476 evalue:6.8e-169 qcov:97.30 identity:67.50;
tigrfam_acc TIGR01082;
tigrfam_desc UDP-N-acetylmuramate--L-alanine ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murC;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01082 evalue:8.3e-148 score:492.3 best_domain_score:492.1 name:TIGR01082;
12327 12605 CDS
ID metaerg.pl|10110
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
sp YES;
tm_num 3;
12327 12389 lipoprotein_signal_peptide
ID metaerg.pl|10111
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
12327 12605 transmembrane_helix
ID metaerg.pl|10112
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology o12339-12398i12417-12476o12504-12572i;
12716 13057 CDS
ID metaerg.pl|10113
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
tm_num 3;
12716 13057 transmembrane_helix
ID metaerg.pl|10114
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology o12728-12796i12815-12874o12902-12970i;
13167 14108 CDS
ID metaerg.pl|10115
allec_ids 1.3.1.98;
allgo_ids GO:0016491; GO:0050660; GO:0055114; GO:0005737; GO:0071949; GO:0008762; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K00075;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sediminimonas;s__Sediminimonas qiaohouensis;
genomedb_acc GCF_000423645.1;
genomedb_target db:genomedb|GCF_000423645.1|WP_026756220.1 9 312 evalue:1.1e-128 qcov:97.10 identity:78.00;
kegg_pathway_id 00530;
kegg_pathway_name Aminosugars metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF01565; PF02873;
pfam_desc FAD binding domain ; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain;
pfam_id FAD_binding_4; MurB_C;
pfam_target db:Pfam-A.hmm|PF01565.23 evalue:1.2e-18 score:66.5 best_domain_score:65.6 name:FAD_binding_4; db:Pfam-A.hmm|PF02873.16 evalue:1.9e-31 score:107.9 best_domain_score:103.0 name:MurB_C;
sprot_desc UDP-N-acetylenolpyruvoylglucosamine reductase;
sprot_id sp|A1BAL1|MURB_PARDP;
sprot_target db:uniprot_sprot|sp|A1BAL1|MURB_PARDP 9 306 evalue:2.3e-125 qcov:95.20 identity:76.20;
tigrfam_acc TIGR00179;
tigrfam_desc UDP-N-acetylenolpyruvoylglucosamine reductase;
tigrfam_mainrole Cell envelope;
tigrfam_name murB;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00179 evalue:4.8e-48 score:163.0 best_domain_score:162.8 name:TIGR00179;
14195 15109 CDS
ID metaerg.pl|10116
allec_ids 6.3.2.4;
allgo_ids GO:0008716; GO:0005737; GO:0005524; GO:0046872; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01921;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06003.1 1 304 evalue:7.6e-151 qcov:100.00 identity:84.20;
kegg_pathway_id 00550; 00473;
kegg_pathway_name Peptidoglycan biosynthesis; D-Alanine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-6471; PWY-6386; PEPTIDOGLYCANSYN-PWY; PWY-6470; PWY-6387; PWY-6385; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF07478; PF01820;
pfam_desc D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus;
pfam_id Dala_Dala_lig_C; Dala_Dala_lig_N;
pfam_target db:Pfam-A.hmm|PF07478.13 evalue:3.8e-32 score:110.7 best_domain_score:110.3 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF01820.21 evalue:4.1e-19 score:68.2 best_domain_score:62.9 name:Dala_Dala_lig_N;
sprot_desc D-alanine--D-alanine ligase;
sprot_id sp|A4WQD9|DDL_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WQD9|DDL_RHOS5 2 304 evalue:1.2e-131 qcov:99.70 identity:71.30;
tigrfam_acc TIGR01205;
tigrfam_desc D-alanine--D-alanine ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name D_ala_D_alaTIGR;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01205 evalue:9.7e-74 score:247.3 best_domain_score:247.1 name:TIGR01205;
15097 16311 CDS
ID metaerg.pl|10117
allgo_ids GO:0032153; GO:0005887; GO:0090529; GO:0043093;
allko_ids K03589;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06004.1 108 400 evalue:1.8e-78 qcov:72.50 identity:57.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF03799;
pfam_desc Cell division protein FtsQ;
pfam_id FtsQ;
pfam_target db:Pfam-A.hmm|PF03799.15 evalue:4.6e-09 score:36.4 best_domain_score:35.2 name:FtsQ;
sprot_desc Cell division protein FtsQ;
sprot_id sp|Q3J4L7|FTSQ_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J4L7|FTSQ_RHOS4 116 399 evalue:1.5e-63 qcov:70.30 identity:50.30;
16308 17642 CDS
ID metaerg.pl|10118
allgo_ids GO:0000902; GO:0032153; GO:0009898; GO:0043093;
allko_ids K03590;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06005.1 1 444 evalue:8.4e-215 qcov:100.00 identity:84.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF14450; PF06723; PF11104; PF02491;
pfam_desc Cell division protein FtsA; MreB/Mbl protein; Type IV pilus assembly protein PilM;; SHS2 domain inserted in FTSA;
pfam_id FtsA; MreB_Mbl; PilM_2; SHS2_FTSA;
pfam_target db:Pfam-A.hmm|PF14450.6 evalue:5e-27 score:93.6 best_domain_score:62.7 name:FtsA; db:Pfam-A.hmm|PF06723.13 evalue:9.6e-12 score:43.6 best_domain_score:41.9 name:MreB_Mbl; db:Pfam-A.hmm|PF11104.8 evalue:1e-08 score:33.9 best_domain_score:20.7 name:PilM_2; db:Pfam-A.hmm|PF02491.20 evalue:6.9e-17 score:60.9 best_domain_score:58.6 name:SHS2_FTSA;
sprot_desc Cell division protein FtsA;
sprot_id sp|O30994|FTSA_RHIME;
sprot_target db:uniprot_sprot|sp|O30994|FTSA_RHIME 23 409 evalue:1.9e-72 qcov:87.20 identity:40.60;
tigrfam_acc TIGR01174;
tigrfam_desc cell division protein FtsA;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsA;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR01174 evalue:3e-86 score:289.0 best_domain_score:287.1 name:TIGR01174;
17859 19676 CDS
ID metaerg.pl|10119
allgo_ids GO:0003924;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06006.1 1 605 evalue:2.4e-196 qcov:100.00 identity:68.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF12327; PF00091;
pfam_desc FtsZ family, C-terminal domain; Tubulin/FtsZ family, GTPase domain;
pfam_id FtsZ_C; Tubulin;
pfam_target db:Pfam-A.hmm|PF12327.8 evalue:4.3e-39 score:132.0 best_domain_score:132.0 name:FtsZ_C; db:Pfam-A.hmm|PF00091.25 evalue:1.5e-38 score:132.3 best_domain_score:131.2 name:Tubulin;
tigrfam_acc TIGR00065;
tigrfam_desc cell division protein FtsZ;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsZ;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR00065 evalue:1.3e-125 score:418.5 best_domain_score:418.0 name:TIGR00065;
19951 20883 CDS
ID metaerg.pl|10120
allec_ids 3.5.1.108; 3.5.1.-;
allgo_ids GO:0008759; GO:0009245; GO:0046872; GO:0103117;
allko_ids K02535;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH29915.1 1 307 evalue:2.0e-114 qcov:99.00 identity:70.40;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id NAGLIPASYN-PWY; PWY-0; PWY-1822; LPSSYN-PWY; LYSDEGII-PWY; PWY-6548; PWY-5327; KDO-NAGLIPASYN-PWY; PWY-5784;
metacyc_pathway_name lipid IVA biosynthesis;; putrescine degradation III;; indole-3-acetate activation I;; superpathway of lipopolysaccharide biosynthesis;; L-lysine degradation III;; ; superpathway of L-lysine degradation;; superpathway of (Kdo)2-lipid A biosynthesis;; indole-3-acetate inactivation VIII;;
metacyc_pathway_type Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis;; Putrescine-Degradation;; Activation;; Lipid-Biosynthesis; Super-Pathways;; LYSINE-DEG;; ; LYSINE-DEG; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Indole-3-Acetate-Inactivation;;
pfam_acc PF03331;
pfam_desc UDP-3-O-acyl N-acetylglycosamine deacetylase;
pfam_id LpxC;
pfam_target db:Pfam-A.hmm|PF03331.13 evalue:1.2e-95 score:319.3 best_domain_score:319.1 name:LpxC;
sp YES;
sprot_desc UDP-3-O-acyl-N-acetylglucosamine deacetylase;
sprot_id sp|B8E6A3|LPXC_SHEB2;
sprot_target db:uniprot_sprot|sp|B8E6A3|LPXC_SHEB2 2 299 evalue:4.1e-66 qcov:96.10 identity:43.40;
tigrfam_acc TIGR00325;
tigrfam_desc UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;
tigrfam_mainrole Cell envelope;
tigrfam_name lpxC;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00325 evalue:1.6e-88 score:296.0 best_domain_score:295.8 name:TIGR00325;
19951 20043 signal_peptide
ID metaerg.pl|10121
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
21145 21999 CDS
ID metaerg.pl|10122
allgo_ids GO:0005515; GO:0009279; GO:0043165; GO:0051205;
allko_ids K05807;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06008.1 4 284 evalue:1.3e-115 qcov:98.90 identity:75.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF13428; PF13512; PF14559; PF13174; PF13525;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Outer membrane lipoprotein;
pfam_id TPR_14; TPR_18; TPR_19; TPR_6; YfiO;
pfam_target db:Pfam-A.hmm|PF13428.6 evalue:2.7e-09 score:36.3 best_domain_score:15.2 name:TPR_14; db:Pfam-A.hmm|PF13512.6 evalue:2.3e-11 score:43.3 best_domain_score:40.5 name:TPR_18; db:Pfam-A.hmm|PF14559.6 evalue:6.7e-07 score:29.0 best_domain_score:16.2 name:TPR_19; db:Pfam-A.hmm|PF13174.6 evalue:8.9e-14 score:50.4 best_domain_score:21.7 name:TPR_6; db:Pfam-A.hmm|PF13525.6 evalue:8.5e-46 score:155.5 best_domain_score:155.0 name:YfiO;
sp YES;
sprot_desc Outer membrane protein assembly factor BamD;
sprot_id sp|Q9A6U9|BAMD_CAUVC;
sprot_target db:uniprot_sprot|sp|Q9A6U9|BAMD_CAUVC 14 263 evalue:6.5e-58 qcov:88.00 identity:48.40;
tigrfam_acc TIGR03302;
tigrfam_desc outer membrane assembly lipoprotein YfiO;
tigrfam_mainrole Protein fate;
tigrfam_name OM_YfiO;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR03302 evalue:8.6e-75 score:250.4 best_domain_score:250.3 name:TIGR03302;
21145 21222 lipoprotein_signal_peptide
ID metaerg.pl|10123
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
22038 23735 CDS
ID metaerg.pl|10124
allgo_ids GO:0005524; GO:0006310; GO:0006281;
allko_ids K03631;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06009.1 1 563 evalue:1.3e-217 qcov:99.60 identity:75.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF13304; PF13476;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain;
pfam_id AAA_21; AAA_23;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.1e-07 score:29.7 best_domain_score:17.5 name:AAA_21; db:Pfam-A.hmm|PF13476.6 evalue:4.7e-09 score:36.3 best_domain_score:35.0 name:AAA_23;
sprot_desc DNA repair protein RecN;
sprot_id sp|Q9PB02|RECN_XYLFA;
sprot_target db:uniprot_sprot|sp|Q9PB02|RECN_XYLFA 1 563 evalue:4.7e-60 qcov:99.60 identity:33.10;
tigrfam_acc TIGR00634;
tigrfam_desc DNA repair protein RecN;
tigrfam_mainrole DNA metabolism;
tigrfam_name recN;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00634 evalue:2.5e-138 score:461.6 best_domain_score:459.5 name:TIGR00634;
24022 24207 CDS
ID metaerg.pl|10125
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06010.1 2 61 evalue:1.8e-14 qcov:98.40 identity:65.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
24772 24699 tRNA
ID metaerg.pl|10126
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
name tRNA_Gly_ccc;
25463 24966 CDS
ID metaerg.pl|10127
allgo_ids GO:0003697; GO:0006310; GO:0006281; GO:0006260;
allko_ids K03111;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Donghicola;s__Donghicola eburneus;
genomedb_acc GCF_900115865.1;
genomedb_target db:genomedb|GCF_900115865.1|WP_072706938.1 1 165 evalue:1.8e-66 qcov:100.00 identity:83.10;
kegg_pathway_id 03030; 03430; 03440;
kegg_pathway_name DNA replication; Mismatch repair; Homologous recombination;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00436;
pfam_desc Single-strand binding protein family;
pfam_id SSB;
pfam_target db:Pfam-A.hmm|PF00436.25 evalue:1.9e-38 score:129.9 best_domain_score:129.6 name:SSB;
sprot_desc Single-stranded DNA-binding protein;
sprot_id sp|Q9ZAQ8|SSB_RHOS4;
sprot_target db:uniprot_sprot|sp|Q9ZAQ8|SSB_RHOS4 1 117 evalue:1.6e-53 qcov:70.90 identity:86.30;
tigrfam_acc TIGR00621;
tigrfam_desc single-stranded DNA-binding protein;
tigrfam_mainrole DNA metabolism;
tigrfam_name ssb;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00621 evalue:1e-45 score:155.2 best_domain_score:154.9 name:TIGR00621;
25574 26221 CDS
ID metaerg.pl|10128
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480765.1 30 215 evalue:5.4e-66 qcov:86.50 identity:67.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF01464;
pfam_desc Transglycosylase SLT domain;
pfam_id SLT;
pfam_target db:Pfam-A.hmm|PF01464.20 evalue:2.2e-26 score:91.0 best_domain_score:90.4 name:SLT;
sp YES;
25574 25696 signal_peptide
ID metaerg.pl|10129
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
26393 28102 CDS
ID metaerg.pl|10130
allec_ids 1.3.8.-;
allgo_ids GO:0016627; GO:0055114; GO:0050660; GO:0052890;
allko_ids K00249; K11731; K06446; K00253; K00248; K14448; K20035;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06027.1 1 569 evalue:1.3e-255 qcov:100.00 identity:76.10;
kegg_pathway_id 00280; 00650; 00640; 00930; 00071; 00410;
kegg_pathway_name Valine, leucine and isoleucine degradation; Butanoate metabolism; Propanoate metabolism; Caprolactam degradation; Fatty acid metabolism; beta-Alanine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00441; PF08028; PF12806; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acetyl-CoA dehydrogenase C-terminal like; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_C; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:6.9e-27 score:93.7 best_domain_score:93.7 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:6.2e-10 score:38.7 best_domain_score:38.7 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF12806.7 evalue:2.2e-11 score:43.2 best_domain_score:40.4 name:Acyl-CoA_dh_C; db:Pfam-A.hmm|PF02770.19 evalue:2.3e-17 score:62.2 best_domain_score:61.1 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:5.7e-07 score:29.4 best_domain_score:27.7 name:Acyl-CoA_dh_N;
sprot_desc 3-methylmercaptopropionyl-CoA dehydrogenase;
sprot_id sp|Q5LLW7|DMDC_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LLW7|DMDC_RUEPO 1 505 evalue:2.2e-126 qcov:88.80 identity:47.70;
28186 29304 CDS
ID metaerg.pl|10131
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06028.1 23 369 evalue:1.9e-159 qcov:93.30 identity:73.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:2.7e-19 score:69.2 best_domain_score:68.1 name:Lactamase_B;
29739 30332 CDS
ID metaerg.pl|10132
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH30554.1 1 197 evalue:6.2e-69 qcov:100.00 identity:67.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
sp YES;
29739 29792 lipoprotein_signal_peptide
ID metaerg.pl|10133
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
30692 30357 CDS
ID metaerg.pl|10134
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__QEYE01;s__QEYE01 sp003122205;
genomedb_acc GCF_003122205.1;
genomedb_target db:genomedb|GCF_003122205.1|WP_109424891.1 1 101 evalue:1.5e-27 qcov:91.00 identity:57.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF05437;
pfam_desc Branched-chain amino acid transport protein (AzlD);
pfam_id AzlD;
pfam_target db:Pfam-A.hmm|PF05437.12 evalue:1.8e-20 score:72.2 best_domain_score:72.0 name:AzlD;
tm_num 2;
30692 30357 transmembrane_helix
ID metaerg.pl|10135
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology i30381-30449o30609-30677i;
31501 30689 CDS
ID metaerg.pl|10136
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__UBA10424;s__UBA10424 sp003500165;
genomedb_acc GCA_003500165.1;
genomedb_target db:genomedb|GCA_003500165.1|HBG97642.1 36 261 evalue:9.4e-68 qcov:83.70 identity:64.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF03591;
pfam_desc AzlC protein;
pfam_id AzlC;
pfam_target db:Pfam-A.hmm|PF03591.14 evalue:9e-31 score:106.4 best_domain_score:106.4 name:AzlC;
tm_num 6;
31501 30689 transmembrane_helix
ID metaerg.pl|10137
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology o30794-30862i30881-30949o30959-31018i31160-31228o31256-31324i31361-31429o;
32671 31598 CDS
ID metaerg.pl|10138
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06034.1 12 357 evalue:8.3e-64 qcov:96.90 identity:50.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
tm_num 2;
32671 31598 transmembrane_helix
ID metaerg.pl|10139
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology o31673-31732i31766-31834o;
33221 32766 CDS
ID metaerg.pl|10140
allgo_ids GO:0003677; GO:0032784; GO:0070063;
allko_ids K03624;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06035.1 1 150 evalue:7.8e-64 qcov:99.30 identity:84.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF01272; PF03449;
pfam_desc Transcription elongation factor, GreA/GreB, C-term; Transcription elongation factor, N-terminal;
pfam_id GreA_GreB; GreA_GreB_N;
pfam_target db:Pfam-A.hmm|PF01272.19 evalue:4.8e-28 score:96.1 best_domain_score:95.5 name:GreA_GreB; db:Pfam-A.hmm|PF03449.15 evalue:1e-30 score:104.9 best_domain_score:104.9 name:GreA_GreB_N;
sprot_desc Transcription elongation factor GreA;
sprot_id sp|A3PGS3|GREA_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PGS3|GREA_RHOS1 1 151 evalue:9.4e-64 qcov:100.00 identity:81.50;
tigrfam_acc TIGR01462;
tigrfam_desc transcription elongation factor GreA;
tigrfam_mainrole Transcription;
tigrfam_name greA;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR01462 evalue:1.9e-58 score:196.0 best_domain_score:195.8 name:TIGR01462;
33462 35108 CDS
ID metaerg.pl|10141
allec_ids 1.5.5.1;
allgo_ids GO:0016491; GO:0055114; GO:0051539; GO:0009055; GO:0004174; GO:0046872; GO:0043783; GO:0048039; GO:0022904;
allko_ids K03388; K00311;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797632.1 1 548 evalue:1.4e-291 qcov:100.00 identity:86.90;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF01266; PF05187; PF00890; PF01494; PF03486; PF05834; PF13450; PF07992; PF01946;
pfam_desc FAD dependent oxidoreductase; Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; FAD binding domain; FAD binding domain; HI0933-like protein; Lycopene cyclase protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Thi4 family;
pfam_id DAO; ETF_QO; FAD_binding_2; FAD_binding_3; HI0933_like; Lycopene_cycl; NAD_binding_8; Pyr_redox_2; Thi4;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:1.7e-10 score:40.2 best_domain_score:24.0 name:DAO; db:Pfam-A.hmm|PF05187.13 evalue:4.3e-49 score:164.2 best_domain_score:163.5 name:ETF_QO; db:Pfam-A.hmm|PF00890.24 evalue:5e-12 score:44.8 best_domain_score:29.8 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:6.8e-06 score:24.8 best_domain_score:19.4 name:FAD_binding_3; db:Pfam-A.hmm|PF03486.14 evalue:1.8e-06 score:26.1 best_domain_score:25.6 name:HI0933_like; db:Pfam-A.hmm|PF05834.12 evalue:1e-05 score:24.0 best_domain_score:23.5 name:Lycopene_cycl; db:Pfam-A.hmm|PF13450.6 evalue:1.3e-08 score:34.2 best_domain_score:32.5 name:NAD_binding_8; db:Pfam-A.hmm|PF07992.14 evalue:8e-07 score:27.8 best_domain_score:26.4 name:Pyr_redox_2; db:Pfam-A.hmm|PF01946.17 evalue:1.7e-08 score:33.2 best_domain_score:29.2 name:Thi4;
sprot_desc Electron transfer flavoprotein-ubiquinone oxidoreductase;
sprot_id sp|Q9HZP5|ETFD_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HZP5|ETFD_PSEAE 4 548 evalue:7.6e-172 qcov:99.50 identity:54.10;
35348 37108 CDS
ID metaerg.pl|10142
allgo_ids GO:0005515;
allko_ids K01768; K09571; K08884; K05864; K01802; K09667;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06037.1 22 583 evalue:2.3e-175 qcov:95.90 identity:58.50;
kegg_pathway_id 04020; 00230; 01030; 05012;
kegg_pathway_name Calcium signaling pathway; Purine metabolism; Glycan structures - biosynthesis 1; Parkinson's disease;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00515; PF13374; PF13414; PF13424; PF13428; PF13429; PF13432; PF13431; PF14559; PF07719; PF13176; PF13181;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_10; TPR_11; TPR_12; TPR_14; TPR_15; TPR_16; TPR_17; TPR_19; TPR_2; TPR_7; TPR_8;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:1.2e-17 score:62.1 best_domain_score:18.9 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:8.6e-10 score:37.4 best_domain_score:19.7 name:TPR_10; db:Pfam-A.hmm|PF13414.6 evalue:3.2e-13 score:48.4 best_domain_score:19.9 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:5.2e-13 score:48.3 best_domain_score:24.6 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:1e-16 score:59.4 best_domain_score:19.6 name:TPR_14; db:Pfam-A.hmm|PF13429.6 evalue:6.8e-07 score:28.0 best_domain_score:28.0 name:TPR_15; db:Pfam-A.hmm|PF13432.6 evalue:1.8e-14 score:53.3 best_domain_score:29.2 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:2.6e-08 score:32.9 best_domain_score:8.8 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:1e-15 score:57.2 best_domain_score:20.0 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:1.2e-23 score:80.5 best_domain_score:24.1 name:TPR_2; db:Pfam-A.hmm|PF13176.6 evalue:3.6e-10 score:38.4 best_domain_score:15.6 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:6.9e-13 score:47.0 best_domain_score:15.4 name:TPR_8;
sp YES;
35348 35479 signal_peptide
ID metaerg.pl|10143
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
37095 38024 CDS
ID metaerg.pl|10144
allec_ids 2.7.1.148;
allgo_ids GO:0005524; GO:0050515; GO:0019288; GO:0016114;
allko_ids K00919;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06038.1 18 292 evalue:3.3e-77 qcov:89.00 identity:62.90;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id NONMEVIPP-PWY; PWY-6270; PWY-5121;
metacyc_pathway_name methylerythritol phosphate pathway I;; isoprene biosynthesis I;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);;
metacyc_pathway_type MEP-Pathways;; ISOPRENOIDS; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;;
pfam_acc PF08544; PF00288;
pfam_desc GHMP kinases C terminal ; GHMP kinases N terminal domain;
pfam_id GHMP_kinases_C; GHMP_kinases_N;
pfam_target db:Pfam-A.hmm|PF08544.13 evalue:4e-12 score:45.6 best_domain_score:44.7 name:GHMP_kinases_C; db:Pfam-A.hmm|PF00288.26 evalue:5.6e-05 score:22.5 best_domain_score:22.5 name:GHMP_kinases_N;
sprot_desc 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;
sprot_id sp|A8LL57|ISPE_DINSH;
sprot_target db:uniprot_sprot|sp|A8LL57|ISPE_DINSH 8 288 evalue:1.1e-61 qcov:90.90 identity:50.90;
39062 38049 CDS
ID metaerg.pl|10145
allec_ids 2.5.1.90;
allgo_ids GO:0008299; GO:0005829; GO:0042802; GO:0046872; GO:0004659; GO:0016094; GO:0006744;
allko_ids K02523;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109534759.1 13 337 evalue:7.7e-120 qcov:96.40 identity:67.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:5e-68 score:228.2 best_domain_score:227.9 name:polyprenyl_synt;
sprot_desc Octaprenyl diphosphate synthase;
sprot_id sp|P0AD57|ISPB_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AD57|ISPB_ECOLI 25 335 evalue:3.0e-62 qcov:92.30 identity:42.40;
39110 39319 CDS
ID metaerg.pl|10146
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068305787.1 3 65 evalue:3.5e-19 qcov:91.30 identity:77.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF09413;
pfam_desc Putative prokaryotic signal transducing protein;
pfam_id DUF2007;
pfam_target db:Pfam-A.hmm|PF09413.10 evalue:4.4e-14 score:51.6 best_domain_score:51.5 name:DUF2007;
39346 40137 CDS
ID metaerg.pl|10147
allgo_ids GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068305785.1 17 263 evalue:6.5e-82 qcov:93.90 identity:65.20;
kegg_pathway_id 00380; 00340; 00150; 00350; 00626; 00450;
kegg_pathway_name Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism; Tyrosine metabolism; Naphthalene and anthracene degradation; Selenoamino acid metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF08241; PF13649; PF05175;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain;
pfam_id Methyltransf_11; Methyltransf_25; MTS;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:1.2e-05 score:25.1 best_domain_score:23.1 name:Methyltransf_11; db:Pfam-A.hmm|PF13649.6 evalue:2.4e-09 score:37.0 best_domain_score:35.9 name:Methyltransf_25; db:Pfam-A.hmm|PF05175.14 evalue:5.3e-12 score:44.8 best_domain_score:43.6 name:MTS;
41302 40400 CDS
ID metaerg.pl|10148
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06050.1 4 300 evalue:7.2e-101 qcov:99.00 identity:69.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:5.6e-21 score:74.4 best_domain_score:51.2 name:EamA;
tm_num 10;
41302 40400 transmembrane_helix
ID metaerg.pl|10149
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology i40418-40486o40514-40582i40601-40654o40682-40750i40769-40837o40847-40906i40925-40993o41021-41080i41117-41185o41195-41248i;
42142 41420 CDS
ID metaerg.pl|10150
allec_ids 1.1.1.36;
allgo_ids GO:0005737; GO:0018454; GO:0042619;
allko_ids K00023; K07535; K12420; K00022;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudorhodobacter;s__Pseudorhodobacter wandonensis;
genomedb_acc GCF_001202035.1;
genomedb_target db:genomedb|GCF_001202035.1|WP_050523966.1 1 240 evalue:2.3e-118 qcov:100.00 identity:90.00;
kegg_pathway_id 00632; 00930; 00380; 00310; 00280; 00281; 00071; 00650; 00062;
kegg_pathway_name Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Fatty acid metabolism; Butanoate metabolism; Fatty acid elongation in mitochondria;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY1-3; PWY-5676; PWY-5080;
metacyc_pathway_name polyhydroxybutanoate biosynthesis;; acetyl-CoA fermentation to butanoate II;; very long chain fatty acid biosynthesis I;;
metacyc_pathway_type Storage-Compounds-Biosynthesis;; Acetyl-CoA-Butyrate; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2.6e-51 score:173.1 best_domain_score:172.9 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:9.3e-55 score:185.0 best_domain_score:184.6 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:7.5e-17 score:61.0 best_domain_score:60.5 name:KR;
sp YES;
sprot_desc Acetoacetyl-CoA reductase;
sprot_id sp|P23238|PHAB_ZOORA;
sprot_target db:uniprot_sprot|sp|P23238|PHAB_ZOORA 1 240 evalue:1.2e-97 qcov:100.00 identity:75.10;
tigrfam_acc TIGR01829;
tigrfam_desc acetoacetyl-CoA reductase;
tigrfam_name AcAcCoA_reduct;
tigrfam_target db:TIGRFAMs.hmm|TIGR01829 evalue:2.3e-101 score:337.7 best_domain_score:337.5 name:TIGR01829;
41420 41512 signal_peptide
ID metaerg.pl|10151
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
43442 42270 CDS
ID metaerg.pl|10152
allec_ids 2.3.1.9; 2.3.1.16;
allgo_ids GO:0016747; GO:0005737; GO:0003985; GO:0042619;
allko_ids K07508; K07823; K07513; K02615; K00632; K07509; K00626; K07550;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_A;s__Rhodobacter_A sphaeroides;
genomedb_acc GCF_000012905.2;
genomedb_target db:genomedb|GCF_000012905.2|YP_353824.2 1 390 evalue:5.9e-196 qcov:100.00 identity:88.70;
kegg_pathway_id 00120; 00632; 00380; 00620; 00062; 01040; 00362; 00592; 00650; 00640; 00310; 00281; 00280; 00072; 02020; 00071;
kegg_pathway_name Bile acid biosynthesis; Benzoate degradation via CoA ligation; Tryptophan metabolism; Pyruvate metabolism; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation; alpha-Linolenic acid metabolism; Butanoate metabolism; Propanoate metabolism; Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Synthesis and degradation of ketone bodies; Two-component system - General; Fatty acid metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id TRYPTOPHAN-DEGRADATION-1; PWY-5789; PWY66-368; CENTFERM-PWY; PWY-5327; PWY-5177; PWY-5136; PWY-5676; ILEUDEG-PWY; ACETOACETATE-DEG-PWY; PWY-6174; FAO-PWY; PWY-6146; PWY1-3; PWY-561; PWY-5184; PWY-5910; PWY-6435; GLUDEG-II-PWY; PWY-922;
metacyc_pathway_name L-tryptophan degradation III (eukaryotic);; 3-hydroxypropanoate/4-hydroxybutanate cycle;; ketolysis;; pyruvate fermentation to butanoate;; superpathway of L-lysine degradation;; glutaryl-CoA degradation;; fatty acid β-oxidation II (peroxisome);; acetyl-CoA fermentation to butanoate II;; L-isoleucine degradation I;; acetoacetate degradation (to acetyl CoA);; mevalonate pathway II (archaea);; fatty acid β-oxidation I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; polyhydroxybutanoate biosynthesis;; superpathway of glyoxylate cycle and fatty acid degradation;; toluene degradation VI (anaerobic);; superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; 4-hydroxybenzoate biosynthesis III (plants);; L-glutamate degradation VII (to butanoate);; mevalonate pathway I;;
metacyc_pathway_type Super-Pathways; TRYPTOPHAN-DEG;; Autotrophic-CO2-Fixation;; OTHER-ENERGY;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;; LYSINE-DEG; Super-Pathways;; CARBOXYLATES-DEG;; Fatty-Acid-Degradation;; Acetyl-CoA-Butyrate; Super-Pathways;; ISOLEUCINE-DEG;; Fatty-Acid-and-Lipid-Degradation;; Mevalonate-Pathways;; Fatty-Acid-Degradation;; Biosynthesis; Super-Pathways;; Storage-Compounds-Biosynthesis;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; 4-Hydroxybenzoate-Biosynthesis;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Mevalonate-Pathways;;
pfam_acc PF02803; PF00108;
pfam_desc Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF02803.18 evalue:4.1e-51 score:171.0 best_domain_score:170.8 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:3.1e-104 score:347.2 best_domain_score:346.8 name:Thiolase_N;
sprot_desc Acetyl-CoA acetyltransferase;
sprot_id sp|P54810|THIL_PARDE;
sprot_target db:uniprot_sprot|sp|P54810|THIL_PARDE 1 390 evalue:3.7e-173 qcov:100.00 identity:78.50;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:3.5e-141 score:469.7 best_domain_score:469.6 name:TIGR01930;
44893 44042 CDS
ID metaerg.pl|10153
allec_ids 3.1.4.52;
allgo_ids GO:0016021; GO:0005886; GO:0071111;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06047.1 19 283 evalue:1.9e-119 qcov:93.60 identity:80.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00563;
pfam_desc EAL domain;
pfam_id EAL;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:1.8e-52 score:177.4 best_domain_score:177.2 name:EAL;
sprot_desc Probable cyclic di-GMP phosphodiesterase PdeN;
sprot_id sp|P76446|PDEN_ECOLI;
sprot_target db:uniprot_sprot|sp|P76446|PDEN_ECOLI 39 268 evalue:5.9e-19 qcov:81.30 identity:28.50;
45119 46507 CDS
ID metaerg.pl|10154
allec_ids 4.3.2.1;
allgo_ids GO:0005737; GO:0004056; GO:0042450;
allko_ids K01679; K01744; K01756; K01857; K01755;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06046.1 4 461 evalue:2.3e-223 qcov:99.10 identity:87.60;
kegg_pathway_id 00720; 00020; 00230; 00220; 00252; 00330; 00362; 00910;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Citrate cycle (TCA cycle); Purine metabolism; Urea cycle and metabolism of amino groups; Alanine and aspartate metabolism; Arginine and proline metabolism; Benzoate degradation via hydroxylation; Nitrogen metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-5004; PWY-4984; ARGININE-SYN4-PWY; ARGSYNBSUB-PWY; PWY-5; ARG+POLYAMINE-SYN; ARGSYN-PWY; PWY-5154; PWY-4983;
metacyc_pathway_name superpathway of L-citrulline metabolism;; urea cycle;; L-ornithine biosynthesis II;; L-arginine biosynthesis II (acetyl cycle);; canavanine biosynthesis;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; nitric oxide biosynthesis II (mammals);;
metacyc_pathway_type Citrulline-Biosynthesis; Super-Pathways;; NITROGEN-DEG;; L-Ornithine-Biosynthesis;; ARGININE-SYN;; NON-PROTEIN-AMINO-ACID-SYN;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;;
pfam_acc PF14698; PF00206;
pfam_desc Argininosuccinate lyase C-terminal; Lyase;
pfam_id ASL_C2; Lyase_1;
pfam_target db:Pfam-A.hmm|PF14698.6 evalue:6.3e-24 score:83.8 best_domain_score:82.3 name:ASL_C2; db:Pfam-A.hmm|PF00206.20 evalue:2.8e-77 score:259.4 best_domain_score:258.7 name:Lyase_1;
sprot_desc Argininosuccinate lyase;
sprot_id sp|Q3IZY2|ARLY_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IZY2|ARLY_RHOS4 5 462 evalue:2.7e-215 qcov:99.10 identity:83.20;
tigrfam_acc TIGR00838;
tigrfam_desc argininosuccinate lyase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argH;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00838 evalue:1.8e-172 score:573.6 best_domain_score:573.4 name:TIGR00838;
46618 46959 CDS
ID metaerg.pl|10155
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071471021.1 1 103 evalue:1.3e-39 qcov:91.20 identity:74.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF11196;
pfam_desc Protein of unknown function (DUF2834);
pfam_id DUF2834;
pfam_target db:Pfam-A.hmm|PF11196.8 evalue:7.1e-26 score:89.6 best_domain_score:89.5 name:DUF2834;
tm_num 3;
46618 46959 transmembrane_helix
ID metaerg.pl|10156
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology i46636-46704o46762-46827i46846-46914o;
46980 48260 CDS
ID metaerg.pl|10157
allec_ids 4.1.1.20;
allgo_ids GO:0003824; GO:0008836; GO:0030170; GO:0009089;
allko_ids K12526; K01586; K01581;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06043.1 1 421 evalue:3.5e-210 qcov:98.80 identity:85.00;
kegg_pathway_id 00300; 00220; 00480;
kegg_pathway_name Lysine biosynthesis; Urea cycle and metabolism of amino groups; Glutathione metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-5097; P4-PWY; PWY-2941; PWY-724; DAPLYSINESYN-PWY; PWY0-781;
metacyc_pathway_name L-lysine biosynthesis VI;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; L-lysine biosynthesis II;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-lysine biosynthesis I;; aspartate superpathway;;
metacyc_pathway_type LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Super-Pathways;;
pfam_acc PF01168; PF02784; PF00278;
pfam_desc Alanine racemase, N-terminal domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Pyridoxal-dependent decarboxylase, C-terminal sheet domain;
pfam_id Ala_racemase_N; Orn_Arg_deC_N; Orn_DAP_Arg_deC;
pfam_target db:Pfam-A.hmm|PF01168.20 evalue:1.9e-07 score:30.2 best_domain_score:29.4 name:Ala_racemase_N; db:Pfam-A.hmm|PF02784.16 evalue:1.4e-57 score:194.2 best_domain_score:193.9 name:Orn_Arg_deC_N; db:Pfam-A.hmm|PF00278.22 evalue:2.7e-28 score:97.3 best_domain_score:96.9 name:Orn_DAP_Arg_deC;
sprot_desc Diaminopimelate decarboxylase;
sprot_id sp|Q9Z661|DCDA_ZYMMO;
sprot_target db:uniprot_sprot|sp|Q9Z661|DCDA_ZYMMO 4 421 evalue:6.0e-108 qcov:98.10 identity:49.90;
tigrfam_acc TIGR01048;
tigrfam_desc diaminopimelate decarboxylase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name lysA;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01048 evalue:1.1e-136 score:454.8 best_domain_score:454.6 name:TIGR01048;
48268 50784 CDS
ID metaerg.pl|10158
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06042.1 14 838 evalue:1.1e-268 qcov:98.40 identity:62.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF13779;
pfam_desc Domain of unknown function (DUF4175);
pfam_id DUF4175;
pfam_target db:Pfam-A.hmm|PF13779.6 evalue:4.3e-218 score:725.5 best_domain_score:725.3 name:DUF4175;
tm_num 3;
48268 50784 transmembrane_helix
ID metaerg.pl|10159
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology i48358-48417o48445-48513i48724-48783o;
51238 52341 CDS
ID metaerg.pl|10160
allec_ids 2.1.2.10;
allgo_ids GO:0005743; GO:0005739; GO:0005654; GO:0004047; GO:0031405; GO:0008483; GO:0006546; GO:0019464;
allko_ids K00302; K00314; K00605;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05729.1 1 367 evalue:1.5e-132 qcov:100.00 identity:69.00;
kegg_pathway_id 00910; 00260; 00670;
kegg_pathway_name Nitrogen metabolism; Glycine, serine and threonine metabolism; One carbon pool by folate;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id GLYCLEAV-PWY;
metacyc_pathway_name glycine cleavage;;
metacyc_pathway_type GLYCINE-DEG;;
pfam_acc PF01571; PF08669;
pfam_desc Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain;
pfam_id GCV_T; GCV_T_C;
pfam_target db:Pfam-A.hmm|PF01571.21 evalue:1.5e-80 score:269.5 best_domain_score:269.2 name:GCV_T; db:Pfam-A.hmm|PF08669.11 evalue:7e-17 score:60.4 best_domain_score:59.4 name:GCV_T_C;
sprot_desc Aminomethyltransferase, mitochondrial;
sprot_id sp|P25285|GCST_BOVIN;
sprot_target db:uniprot_sprot|sp|P25285|GCST_BOVIN 2 365 evalue:1.4e-68 qcov:99.20 identity:44.90;
tigrfam_acc TIGR00528;
tigrfam_desc glycine cleavage system T protein;
tigrfam_mainrole Energy metabolism;
tigrfam_name gcvT;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00528 evalue:2e-93 score:312.4 best_domain_score:312.1 name:TIGR00528;
52351 52710 CDS
ID metaerg.pl|10161
allgo_ids GO:0005960; GO:0019464;
allko_ids K02437;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092889820.1 1 119 evalue:9.6e-49 qcov:100.00 identity:83.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00364; PF01597;
pfam_desc Biotin-requiring enzyme; Glycine cleavage H-protein;
pfam_id Biotin_lipoyl; GCV_H;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:4.8e-05 score:22.3 best_domain_score:21.4 name:Biotin_lipoyl; db:Pfam-A.hmm|PF01597.19 evalue:4.4e-44 score:148.5 best_domain_score:148.4 name:GCV_H;
sprot_desc Glycine cleavage system H protein;
sprot_id sp|Q92Q10|GCSH_RHIME;
sprot_target db:uniprot_sprot|sp|Q92Q10|GCSH_RHIME 1 119 evalue:2.2e-36 qcov:100.00 identity:58.00;
tigrfam_acc TIGR00527;
tigrfam_desc glycine cleavage system H protein;
tigrfam_mainrole Energy metabolism;
tigrfam_name gcvH;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00527 evalue:1.2e-43 score:147.4 best_domain_score:147.3 name:TIGR00527;
52739 55576 CDS
ID metaerg.pl|10162
allec_ids 1.4.4.2;
allgo_ids GO:0006520; GO:0016829; GO:0004375; GO:0019464;
allko_ids K00282; K00283; K00281;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05727.1 1 945 evalue:0.0e+00 qcov:100.00 identity:85.30;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id GLYCLEAV-PWY;
metacyc_pathway_name glycine cleavage;;
metacyc_pathway_type GLYCINE-DEG;;
pfam_acc PF00266; PF01212; PF02347;
pfam_desc Aminotransferase class-V; Beta-eliminating lyase; Glycine cleavage system P-protein;
pfam_id Aminotran_5; Beta_elim_lyase; GDC-P;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:2.1e-05 score:22.9 best_domain_score:19.3 name:Aminotran_5; db:Pfam-A.hmm|PF01212.21 evalue:2.4e-05 score:23.0 best_domain_score:21.0 name:Beta_elim_lyase; db:Pfam-A.hmm|PF02347.16 evalue:1.4e-182 score:606.5 best_domain_score:569.0 name:GDC-P;
sprot_desc Glycine dehydrogenase (decarboxylating);
sprot_id sp|Q3J4D4|GCSP_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J4D4|GCSP_RHOS4 1 945 evalue:0.0e+00 qcov:100.00 identity:81.10;
tigrfam_acc TIGR00461;
tigrfam_desc glycine dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name gcvP;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00461 evalue:0 score:1371.0 best_domain_score:1370.8 name:TIGR00461;
55698 58274 CDS
ID metaerg.pl|10163
allec_ids 2.7.9.1;
allgo_ids GO:0016310; GO:0016772; GO:0005524; GO:0016301; GO:0046872; GO:0050242; GO:0006090;
allko_ids K01007; K11183; K02793; K02744; K11189; K11201; K02794; K08484; K02768; K08483; K00873; K02812; K02806; K02821; K01006;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06142.1 1 858 evalue:0.0e+00 qcov:100.00 identity:83.20;
kegg_pathway_id 00230; 02060; 00720; 00620; 00710; 00010;
kegg_pathway_name Purine metabolism; Phosphotransferase system (PTS); Reductive carboxylate cycle (CO2 fixation); Pyruvate metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-241; PWY-6240; PWY-6549;
metacyc_pathway_name C4 photosynthetic carbon assimilation cycle, NADP-ME type;; ; L-glutamine biosynthesis III;;
metacyc_pathway_type Photosynthesis;; ; GLUTAMINE-SYN;;
pfam_acc PF00391; PF02896;
pfam_desc PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain;
pfam_id PEP-utilizers; PEP-utilizers_C;
pfam_target db:Pfam-A.hmm|PF00391.23 evalue:2.4e-27 score:93.7 best_domain_score:92.3 name:PEP-utilizers; db:Pfam-A.hmm|PF02896.18 evalue:3.5e-85 score:284.9 best_domain_score:284.5 name:PEP-utilizers_C;
sprot_desc Pyruvate, phosphate dikinase;
sprot_id sp|Q59754|PPDK_RHIME;
sprot_target db:uniprot_sprot|sp|Q59754|PPDK_RHIME 70 852 evalue:9.0e-196 qcov:91.30 identity:47.60;
tigrfam_acc TIGR01828;
tigrfam_desc pyruvate, phosphate dikinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name pyru_phos_dikin;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01828 evalue:8.5e-255 score:846.9 best_domain_score:842.1 name:TIGR01828;
58638 59402 CDS
ID metaerg.pl|10164
allgo_ids GO:0016787;
allko_ids K01449; K09693; K01448;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06143.1 11 254 evalue:2.1e-53 qcov:96.10 identity:50.60;
kegg_pathway_id 02010; 00550;
kegg_pathway_name ABC transporters - General; Peptidoglycan biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF07486;
pfam_desc Cell Wall Hydrolase;
pfam_id Hydrolase_2;
pfam_target db:Pfam-A.hmm|PF07486.12 evalue:2.2e-23 score:82.3 best_domain_score:81.1 name:Hydrolase_2;
sp YES;
tm_num 1;
58638 58730 signal_peptide
ID metaerg.pl|10165
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
58638 59402 transmembrane_helix
ID metaerg.pl|10166
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology i58671-58730o;
59577 60500 CDS
ID metaerg.pl|10167
allgo_ids GO:0004150; GO:0006760;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07585.1 1 306 evalue:4.4e-122 qcov:99.70 identity:74.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF02152;
pfam_desc Dihydroneopterin aldolase;
pfam_id FolB;
pfam_target db:Pfam-A.hmm|PF02152.18 evalue:6.6e-19 score:67.7 best_domain_score:67.0 name:FolB;
60500 61516 CDS
ID metaerg.pl|10168
allec_ids 2.5.1.15;
allgo_ids GO:0042558; GO:0005829; GO:0004156; GO:0046872; GO:0046656; GO:0046654;
allko_ids K00796;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH29525.1 1 329 evalue:1.7e-119 qcov:97.30 identity:69.40;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-6548; FOLSYN-PWY; ALL-CHORISMATE-PWY;
metacyc_pathway_name ; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;;
metacyc_pathway_type ; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF00809;
pfam_desc Pterin binding enzyme;
pfam_id Pterin_bind;
pfam_target db:Pfam-A.hmm|PF00809.22 evalue:4.3e-82 score:274.7 best_domain_score:274.5 name:Pterin_bind;
sprot_desc Dihydropteroate synthase;
sprot_id sp|Q51161|DHPS_NEIMB;
sprot_target db:uniprot_sprot|sp|Q51161|DHPS_NEIMB 65 327 evalue:1.7e-60 qcov:77.80 identity:51.50;
tigrfam_acc TIGR01496;
tigrfam_desc dihydropteroate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name DHPS;
tigrfam_sub1role Folic acid;
tigrfam_target db:TIGRFAMs.hmm|TIGR01496 evalue:3e-92 score:308.1 best_domain_score:307.8 name:TIGR01496;
62455 61556 CDS
ID metaerg.pl|10169
allgo_ids GO:0006355;
allko_ids K10778; K13530; K00567; K01649;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05204.1 1 298 evalue:3.0e-99 qcov:99.70 identity:62.80;
kegg_pathway_id 00290; 00620;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Pyruvate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF02311; PF07883; PF12833; PF00165;
pfam_desc AraC-like ligand binding domain; Cupin domain; Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id AraC_binding; Cupin_2; HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF02311.19 evalue:4.4e-08 score:32.4 best_domain_score:31.4 name:AraC_binding; db:Pfam-A.hmm|PF07883.11 evalue:9.4e-07 score:27.7 best_domain_score:26.6 name:Cupin_2; db:Pfam-A.hmm|PF12833.7 evalue:8.5e-23 score:79.7 best_domain_score:79.7 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:4.6e-14 score:51.3 best_domain_score:33.3 name:HTH_AraC;
62509 63675 CDS
ID metaerg.pl|10170
allec_ids 1.14.13.2;
allgo_ids GO:0071949; GO:0018659; GO:0050660; GO:0043640;
allko_ids K00481;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05203.1 1 388 evalue:9.3e-186 qcov:100.00 identity:81.70;
kegg_pathway_id 00623; 00362;
kegg_pathway_name 2,4-Dichlorobenzoate degradation; Benzoate degradation via hydroxylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-5181; PWY-2504; PWY-5183; TOLUENE-DEG-4-OH-PWY;
metacyc_pathway_name toluene degradation III (aerobic) (via p-cresol);; superpathway of aromatic compound degradation via 3-oxoadipate;; superpathway of aerobic toluene degradation;; toluene degradation to 4-methylphenol;;
metacyc_pathway_type Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; TOLUENE-DEG;;
pfam_acc PF01494;
pfam_desc FAD binding domain;
pfam_id FAD_binding_3;
pfam_target db:Pfam-A.hmm|PF01494.19 evalue:3.2e-82 score:275.8 best_domain_score:275.5 name:FAD_binding_3;
sprot_desc p-hydroxybenzoate hydroxylase;
sprot_id sp|P20586|PHHY_PSEAE;
sprot_target db:uniprot_sprot|sp|P20586|PHHY_PSEAE 1 388 evalue:2.6e-142 qcov:100.00 identity:63.80;
tigrfam_acc TIGR02360;
tigrfam_desc 4-hydroxybenzoate 3-monooxygenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name pbenz_hydroxyl;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02360 evalue:4.4e-197 score:653.8 best_domain_score:653.6 name:TIGR02360;
63724 64119 CDS
ID metaerg.pl|10171
allec_ids 4.1.1.44;
allgo_ids GO:0051920; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Palleronia;s__Palleronia sp000743715;
genomedb_acc GCF_000743715.1;
genomedb_target db:genomedb|GCF_000743715.1|WP_036181103.1 1 124 evalue:9.9e-47 qcov:94.70 identity:78.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-5181; PWY-5431; PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY; PWY-2504; PWY-5183;
metacyc_pathway_name toluene degradation III (aerobic) (via p-cresol);; aromatic compounds degradation via β-ketoadipate;; protocatechuate degradation II (ortho-cleavage pathway);; superpathway of aromatic compound degradation via 3-oxoadipate;; superpathway of aerobic toluene degradation;;
metacyc_pathway_type Super-Pathways; TOLUENE-DEG;; Catechol-Degradation; Super-Pathways;; Protocatechuate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;;
pfam_acc PF02627;
pfam_desc Carboxymuconolactone decarboxylase family;
pfam_id CMD;
pfam_target db:Pfam-A.hmm|PF02627.20 evalue:3.3e-18 score:64.7 best_domain_score:64.1 name:CMD;
tigrfam_acc TIGR02425;
tigrfam_desc 4-carboxymuconolactone decarboxylase;
tigrfam_mainrole Energy metabolism;
tigrfam_name decarb_PcaC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02425 evalue:3e-54 score:181.6 best_domain_score:181.4 name:TIGR02425;
64116 64853 CDS
ID metaerg.pl|10172
allec_ids 1.13.11.3;
allgo_ids GO:0003824; GO:0006725; GO:0008199; GO:0055114; GO:0018578; GO:0019619; GO:0042952;
allko_ids K00448; K00449;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Defluviimonas_A;s__Defluviimonas_A sp002871005;
genomedb_acc GCF_002871005.1;
genomedb_target db:genomedb|GCF_002871005.1|WP_102227041.1 1 245 evalue:4.3e-128 qcov:100.00 identity:88.20;
kegg_pathway_id 00623; 00362;
kegg_pathway_name 2,4-Dichlorobenzoate degradation; Benzoate degradation via hydroxylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-5183; PWY-2504; PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY; GALLATE-DEGRADATION-I-PWY; PWY-5431; PWY-5181;
metacyc_pathway_name superpathway of aerobic toluene degradation;; superpathway of aromatic compound degradation via 3-oxoadipate;; protocatechuate degradation II (ortho-cleavage pathway);; gallate degradation II;; aromatic compounds degradation via β-ketoadipate;; toluene degradation III (aerobic) (via p-cresol);;
metacyc_pathway_type Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Protocatechuate-Degradation;; GALLATE-DEG;; Catechol-Degradation; Super-Pathways;; Super-Pathways; TOLUENE-DEG;;
pfam_acc PF00775; PF12391;
pfam_desc Dioxygenase; Protocatechuate 3,4-dioxygenase beta subunit N terminal;
pfam_id Dioxygenase_C; PCDO_beta_N;
pfam_target db:Pfam-A.hmm|PF00775.21 evalue:8.9e-50 score:167.9 best_domain_score:167.6 name:Dioxygenase_C; db:Pfam-A.hmm|PF12391.8 evalue:1.7e-06 score:26.8 best_domain_score:25.8 name:PCDO_beta_N;
sprot_desc Protocatechuate 3,4-dioxygenase beta chain;
sprot_id sp|P00437|PCXB_PSEPU;
sprot_target db:uniprot_sprot|sp|P00437|PCXB_PSEPU 3 240 evalue:1.2e-76 qcov:97.10 identity:55.00;
tigrfam_acc TIGR02422;
tigrfam_desc protocatechuate 3,4-dioxygenase, beta subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name protocat_beta;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02422 evalue:1e-99 score:331.8 best_domain_score:331.7 name:TIGR02422;
64853 65452 CDS
ID metaerg.pl|10173
allec_ids 1.13.11.3;
allgo_ids GO:0003824; GO:0006725; GO:0008199; GO:0055114; GO:0018578; GO:0042952;
allko_ids K00448; K00449;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05200.1 1 199 evalue:1.3e-90 qcov:100.00 identity:80.90;
kegg_pathway_id 00623; 00362;
kegg_pathway_name 2,4-Dichlorobenzoate degradation; Benzoate degradation via hydroxylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id GALLATE-DEGRADATION-I-PWY; PWY-2504; PWY-5183; PROTOCATECHUATE-ORTHO-CLEAVAGE-PWY; PWY-5431; PWY-5181;
metacyc_pathway_name gallate degradation II;; superpathway of aromatic compound degradation via 3-oxoadipate;; superpathway of aerobic toluene degradation;; protocatechuate degradation II (ortho-cleavage pathway);; aromatic compounds degradation via β-ketoadipate;; toluene degradation III (aerobic) (via p-cresol);;
metacyc_pathway_type GALLATE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Protocatechuate-Degradation;; Catechol-Degradation; Super-Pathways;; Super-Pathways; TOLUENE-DEG;;
pfam_acc PF00775;
pfam_desc Dioxygenase;
pfam_id Dioxygenase_C;
pfam_target db:Pfam-A.hmm|PF00775.21 evalue:1.1e-13 score:50.3 best_domain_score:49.0 name:Dioxygenase_C;
sprot_desc Protocatechuate 3,4-dioxygenase alpha chain;
sprot_id sp|P20371|PCXA_ACIAD;
sprot_target db:uniprot_sprot|sp|P20371|PCXA_ACIAD 8 199 evalue:1.1e-43 qcov:96.50 identity:50.50;
tigrfam_acc TIGR02423;
tigrfam_desc protocatechuate 3,4-dioxygenase, alpha subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name protocat_alph;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02423 evalue:1.4e-61 score:206.9 best_domain_score:206.7 name:TIGR02423;
65544 66374 CDS
ID metaerg.pl|10174
allec_ids 2.3.1.247;
allgo_ids GO:0016740; GO:0019475; GO:0046872;
allko_ids K18013;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pleomorphomonadaceae_A;g__Prosthecomicrobium;s__Prosthecomicrobium hirschii;
genomedb_acc GCF_001305515.1;
genomedb_target db:genomedb|GCF_001305515.1|WP_054359089.1 1 274 evalue:1.9e-132 qcov:99.30 identity:83.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF05853;
pfam_desc beta-keto acid cleavage enzyme;
pfam_id BKACE;
pfam_target db:Pfam-A.hmm|PF05853.12 evalue:2.1e-90 score:302.0 best_domain_score:301.8 name:BKACE;
sprot_desc 3-keto-5-aminohexanoate cleavage enzyme;
sprot_id sp|E3PRK0|KCE_ACESD;
sprot_target db:uniprot_sprot|sp|E3PRK0|KCE_ACESD 6 273 evalue:2.6e-43 qcov:97.10 identity:38.40;
67145 66483 CDS
ID metaerg.pl|10175
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07647.1 2 219 evalue:2.1e-86 qcov:99.10 identity:74.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00881; PF14512;
pfam_desc Nitroreductase family; Putative TM nitroreductase;
pfam_id Nitroreductase; TM1586_NiRdase;
pfam_target db:Pfam-A.hmm|PF00881.24 evalue:1e-24 score:86.8 best_domain_score:86.4 name:Nitroreductase; db:Pfam-A.hmm|PF14512.6 evalue:9.5e-10 score:37.6 best_domain_score:18.8 name:TM1586_NiRdase;
67300 68226 CDS
ID metaerg.pl|10176
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07646.1 30 303 evalue:3.1e-83 qcov:89.00 identity:59.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
sp YES;
tm_num 1;
67300 67374 signal_peptide
ID metaerg.pl|10177
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
67300 68226 transmembrane_helix
ID metaerg.pl|10178
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology i67312-67371o;
69089 68412 CDS
ID metaerg.pl|10179
allec_ids 3.4.21.88;
allgo_ids GO:0004252; GO:0006508; GO:0032993; GO:0001217; GO:0000976; GO:0006281; GO:0006260; GO:0009432;
allko_ids K01356;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092890716.1 1 225 evalue:8.0e-89 qcov:100.00 identity:76.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF01726; PF00717;
pfam_desc LexA DNA binding domain; Peptidase S24-like;
pfam_id LexA_DNA_bind; Peptidase_S24;
pfam_target db:Pfam-A.hmm|PF01726.16 evalue:6.3e-17 score:60.4 best_domain_score:59.6 name:LexA_DNA_bind; db:Pfam-A.hmm|PF00717.23 evalue:4.9e-14 score:51.3 best_domain_score:50.7 name:Peptidase_S24;
sprot_desc LexA repressor;
sprot_id sp|A1B3Z0|LEXA_PARDP;
sprot_target db:uniprot_sprot|sp|A1B3Z0|LEXA_PARDP 1 225 evalue:2.3e-82 qcov:100.00 identity:69.00;
tigrfam_acc TIGR00498;
tigrfam_desc repressor LexA;
tigrfam_mainrole Regulatory functions;
tigrfam_name lexA;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00498 evalue:2.4e-55 score:186.5 best_domain_score:186.2 name:TIGR00498;
69691 69963 CDS
ID metaerg.pl|10180
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
sp YES;
69691 69741 lipoprotein_signal_peptide
ID metaerg.pl|10181
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
70769 69999 CDS
ID metaerg.pl|10182
allgo_ids GO:0004061; GO:0019441;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07133.1 1 255 evalue:7.4e-147 qcov:99.60 identity:94.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF04199;
pfam_desc Putative cyclase;
pfam_id Cyclase;
pfam_target db:Pfam-A.hmm|PF04199.13 evalue:5.3e-35 score:119.9 best_domain_score:119.4 name:Cyclase;
72113 70779 CDS
ID metaerg.pl|10183
allgo_ids GO:0016021; GO:0005886; GO:0022857; GO:0015740;
allko_ids K11690;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH27549.1 6 444 evalue:1.3e-191 qcov:98.90 identity:84.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:3.1e-82 score:275.9 best_domain_score:275.7 name:DctM;
sprot_desc C4-dicarboxylate TRAP transporter large permease protein DctM;
sprot_id sp|Q9HU16|DCTM_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HU16|DCTM_PSEAE 51 443 evalue:5.4e-51 qcov:88.50 identity:34.70;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:2.3e-91 score:305.7 best_domain_score:305.5 name:TIGR00786;
tm_num 10;
72113 70779 transmembrane_helix
ID metaerg.pl|10184
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology i70812-70907o70965-71024i71085-71153o71235-71303i71322-71390o71496-71600i71637-71705o71781-71879i71898-71966o72024-72092i;
72652 72110 CDS
ID metaerg.pl|10185
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07135.1 2 180 evalue:8.5e-65 qcov:99.40 identity:76.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:6.7e-13 score:47.9 best_domain_score:47.9 name:DctQ;
tm_num 4;
72652 72110 transmembrane_helix
ID metaerg.pl|10186
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology i72170-72229o72272-72340i72422-72490o72533-72601i;
73769 72705 CDS
ID metaerg.pl|10187
allgo_ids GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH27551.1 1 354 evalue:1.5e-158 qcov:100.00 identity:77.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:6.7e-19 score:67.5 best_domain_score:67.2 name:DctP;
sp YES;
72705 72782 signal_peptide
ID metaerg.pl|10188
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
74467 73835 CDS
ID metaerg.pl|10189
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109533099.1 2 209 evalue:1.0e-61 qcov:99.00 identity:62.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF17939; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_30; TetR_N;
pfam_target db:Pfam-A.hmm|PF17939.1 evalue:1.6e-24 score:85.6 best_domain_score:84.8 name:TetR_C_30; db:Pfam-A.hmm|PF00440.23 evalue:1.2e-17 score:62.7 best_domain_score:61.7 name:TetR_N;
77188 74849 CDS
ID metaerg.pl|10190
allko_ids K10107;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06470.1 82 779 evalue:6.7e-167 qcov:89.60 identity:57.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
tm_num 2;
77188 74849 transmembrane_helix
ID metaerg.pl|10191
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
topology i76088-76156o77102-77170i;
77825 77166 CDS
ID metaerg.pl|10192
allgo_ids GO:0005524; GO:0016887; GO:0005886;
allko_ids K09689;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068303849.1 1 218 evalue:2.9e-107 qcov:99.50 identity:86.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:4.8e-14 score:52.3 best_domain_score:48.6 name:ABC_tran;
sprot_desc Polysialic acid transport ATP-binding protein KpsT;
sprot_id sp|P24586|KPST5_ECOLX;
sprot_target db:uniprot_sprot|sp|P24586|KPST5_ECOLX 1 197 evalue:4.1e-36 qcov:90.00 identity:35.70;
78178 79032 CDS
ID metaerg.pl|10193
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE45670.1 1 284 evalue:2.1e-57 qcov:100.00 identity:52.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF07179;
pfam_desc SseB protein N-terminal domain;
pfam_id SseB;
pfam_target db:Pfam-A.hmm|PF07179.12 evalue:2.1e-05 score:24.0 best_domain_score:23.3 name:SseB;
79215 79679 CDS
ID metaerg.pl|10194
allgo_ids GO:0003735; GO:0005840; GO:0006412;
allko_ids K02871;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06467.1 1 154 evalue:3.8e-74 qcov:100.00 identity:89.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00572;
pfam_desc Ribosomal protein L13;
pfam_id Ribosomal_L13;
pfam_target db:Pfam-A.hmm|PF00572.18 evalue:1e-54 score:183.3 best_domain_score:183.1 name:Ribosomal_L13;
sprot_desc 50S ribosomal protein L13;
sprot_id sp|A1B6A9|RL13_PARDP;
sprot_target db:uniprot_sprot|sp|A1B6A9|RL13_PARDP 1 154 evalue:2.3e-73 qcov:100.00 identity:84.40;
tigrfam_acc TIGR01066;
tigrfam_desc ribosomal protein uL13;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplM_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01066 evalue:7.6e-61 score:203.2 best_domain_score:203.0 name:TIGR01066;
79682 80203 CDS
ID metaerg.pl|10195
allgo_ids GO:0003735; GO:0005840; GO:0006412;
allko_ids K02996;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28553.1 1 173 evalue:9.9e-71 qcov:100.00 identity:86.10;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF00380;
pfam_desc Ribosomal protein S9/S16;
pfam_id Ribosomal_S9;
pfam_target db:Pfam-A.hmm|PF00380.19 evalue:7.8e-47 score:158.0 best_domain_score:157.4 name:Ribosomal_S9;
sp YES;
sprot_desc 30S ribosomal protein S9;
sprot_id sp|A3PK94|RS9_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PK94|RS9_RHOS1 4 173 evalue:1.2e-62 qcov:98.30 identity:77.10;
79682 79795 signal_peptide
ID metaerg.pl|10196
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
80405 80764 CDS
ID metaerg.pl|10197
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Boseongicola;s__Boseongicola aestuarii;
genomedb_acc GCF_900184815.1;
genomedb_target db:genomedb|GCF_900184815.1|WP_093974502.1 5 119 evalue:3.7e-08 qcov:96.60 identity:35.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
sp YES;
80405 80467 signal_peptide
ID metaerg.pl|10198
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
80922 82850 CDS
ID metaerg.pl|10199
allec_ids 2.7.7.-;
allgo_ids GO:0003677; GO:0003896; GO:0006260; GO:0008270;
allko_ids K02316;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08034.1 1 642 evalue:1.6e-230 qcov:100.00 identity:65.70;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
metacyc_pathway_id PWY-6476; PWY4FS-4; PHOSLIPSYN2-PWY; PWY-882; THISYN-PWY; PWY-5354;
metacyc_pathway_name cytidylyl molybdenum cofactor biosynthesis;; phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of thiamine diphosphate biosynthesis I;; ;
metacyc_pathway_type Cofactor-Biosynthesis;; PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Ascorbate-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;; ;
pfam_acc PF13155; PF13662; PF08275; PF01807;
pfam_desc Toprim-like; Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger;
pfam_id Toprim_2; Toprim_4; Toprim_N; zf-CHC2;
pfam_target db:Pfam-A.hmm|PF13155.6 evalue:1.7e-12 score:46.8 best_domain_score:45.3 name:Toprim_2; db:Pfam-A.hmm|PF13662.6 evalue:7.8e-14 score:51.2 best_domain_score:50.0 name:Toprim_4; db:Pfam-A.hmm|PF08275.11 evalue:2.7e-39 score:133.4 best_domain_score:132.7 name:Toprim_N; db:Pfam-A.hmm|PF01807.20 evalue:4.3e-28 score:96.2 best_domain_score:95.5 name:zf-CHC2;
tigrfam_acc TIGR01391;
tigrfam_desc DNA primase;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnaG;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01391 evalue:1.7e-114 score:382.0 best_domain_score:381.5 name:TIGR01391;
82951 83634 CDS
ID metaerg.pl|10200
allgo_ids GO:0003677; GO:0006355; GO:0005737; GO:0003700; GO:0016987; GO:0001123;
allko_ids K03086;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE45601.1 1 210 evalue:1.9e-77 qcov:92.10 identity:79.00;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 21.5125; 0.0199435; 0.753132; 25.6285; 3.34298;
pfam_acc PF03979; PF00140;
pfam_desc Sigma-70 factor, region 1.1; Sigma-70 factor, region 1.2;
pfam_id Sigma70_r1_1; Sigma70_r1_2;
pfam_target db:Pfam-A.hmm|PF03979.14 evalue:1.1e-22 score:79.1 best_domain_score:77.9 name:Sigma70_r1_1; db:Pfam-A.hmm|PF00140.20 evalue:1.7e-14 score:52.7 best_domain_score:51.7 name:Sigma70_r1_2;
sprot_desc RNA polymerase sigma factor RpoD;
sprot_id sp|D5AQI9|RPOD_RHOCB;
sprot_target db:uniprot_sprot|sp|D5AQI9|RPOD_RHOCB 1 190 evalue:4.7e-67 qcov:83.30 identity:72.20;
>Feature NODE_74_length_83624_cov_13.7072
1291 2 CDS
ID metaerg.pl|10201
allgo_ids GO:0043531;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Hoeflea;s__Hoeflea marina;
genomedb_acc GCF_003182275.1;
genomedb_target db:genomedb|GCF_003182275.1|WP_110033097.1 1 429 evalue:4.9e-103 qcov:99.80 identity:50.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00931;
pfam_desc NB-ARC domain;
pfam_id NB-ARC;
pfam_target db:Pfam-A.hmm|PF00931.22 evalue:2.9e-08 score:32.5 best_domain_score:29.2 name:NB-ARC;
3052 1607 CDS
ID metaerg.pl|10202
allec_ids 1.2.1.98;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0016620;
allko_ids K00318; K13821; K00128; K00294; K09472; K20928;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05664.1 6 481 evalue:5.3e-231 qcov:99.00 identity:85.70;
kegg_pathway_id 00641; 00120; 00380; 00620; 00330; 00220; 00903; 00561; 00640; 00650; 00010; 00310; 00280; 00251; 00071; 00631; 00410; 00340;
kegg_pathway_name 3-Chloroacrylic acid degradation; Bile acid biosynthesis; Tryptophan metabolism; Pyruvate metabolism; Arginine and proline metabolism; Urea cycle and metabolism of amino groups; Limonene and pinene degradation; Glycerolipid metabolism; Propanoate metabolism; Butanoate metabolism; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine degradation; Glutamate metabolism; Fatty acid metabolism; 1,2-Dichloroethane degradation; beta-Alanine metabolism; Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:2.3e-150 score:500.4 best_domain_score:500.2 name:Aldedh;
sprot_desc Hydroxyisobutyraldehyde dehydrogenase;
sprot_id sp|Q3YAT5|MPDC_MYCAO;
sprot_target db:uniprot_sprot|sp|Q3YAT5|MPDC_MYCAO 9 476 evalue:2.3e-92 qcov:97.30 identity:42.70;
4754 3156 CDS
ID metaerg.pl|10203
allec_ids 7.4.2.10; 3.6.3.24;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015833;
allko_ids K02071; K06861; K01996; K09013; K10441; K10821; K11072; K02068; K02045; K02028; K13892; K01997; K02003; K02010; K02056; K09817; K05847; K12371; K02052; K02006; K13896; K11084; K02034; K10017; K02032; K02017; K10243; K01990; K09812; K10021; K02023; K10025; K12372; K02018; K10000; K10539; K02029; K11962; K02000; K02065; K01995; K02049; K02031; K10545; K01998; K10111; K10112; K10562; K10235; K06857; K05816; K02013; K11076;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05665.1 1 532 evalue:1.0e-219 qcov:100.00 identity:76.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF13304; PF13401; PF00005; PF08352; PF02463;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; RecF/RecN/SMC N terminal domain;
pfam_id AAA_21; AAA_22; ABC_tran; oligo_HPY; SMC_N;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.9e-12 score:45.8 best_domain_score:16.7 name:AAA_21; db:Pfam-A.hmm|PF13401.6 evalue:3.1e-10 score:39.7 best_domain_score:21.9 name:AAA_22; db:Pfam-A.hmm|PF00005.27 evalue:1.4e-58 score:196.5 best_domain_score:107.0 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:4.6e-14 score:51.9 best_domain_score:31.7 name:oligo_HPY; db:Pfam-A.hmm|PF02463.19 evalue:7.2e-11 score:41.2 best_domain_score:23.2 name:SMC_N;
sprot_desc Glutathione import ATP-binding protein GsiA;
sprot_id sp|Q1RE96|GSIA_ECOUT;
sprot_target db:uniprot_sprot|sp|Q1RE96|GSIA_ECOUT 14 520 evalue:4.4e-108 qcov:95.30 identity:45.00;
tigrfam_acc TIGR01727; TIGR02769; TIGR02770;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; nickel import ATP-binding protein NikE; nickel import ATP-binding protein NikD;
tigrfam_mainrole Transport and binding proteins; Transport and binding proteins; Transport and binding proteins;
tigrfam_name oligo_HPY; nickel_nikE; nickel_nikD;
tigrfam_sub1role Amino acids, peptides and amines; Cations and iron carrying compounds; Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:4.6e-13 score:48.2 best_domain_score:28.6 name:TIGR01727; db:TIGRFAMs.hmm|TIGR02769 evalue:8.4e-126 score:418.0 best_domain_score:246.3 name:TIGR02769; db:TIGRFAMs.hmm|TIGR02770 evalue:3.8e-134 score:444.4 best_domain_score:255.3 name:TIGR02770;
5572 4751 CDS
ID metaerg.pl|10204
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015031;
allko_ids K02033; K02034;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05666.1 1 273 evalue:9.0e-127 qcov:100.00 identity:88.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:7.2e-30 score:103.3 best_domain_score:103.3 name:BPD_transp_1;
sprot_desc Dipeptide transport system permease protein DppC;
sprot_id sp|P94312|DPPC_BACPE;
sprot_target db:uniprot_sprot|sp|P94312|DPPC_BACPE 10 270 evalue:8.1e-50 qcov:95.60 identity:42.90;
tm_num 4;
5572 4751 transmembrane_helix
ID metaerg.pl|10205
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology i4769-4837o4964-5032i5081-5149o5450-5518i;
6530 5583 CDS
ID metaerg.pl|10206
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0006865;
allko_ids K13890; K13894; K02033;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05667.1 1 314 evalue:1.1e-144 qcov:99.70 identity:88.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:9.1e-37 score:125.8 best_domain_score:125.8 name:BPD_transp_1;
sprot_desc Probable peptide ABC transporter permease protein y4tP;
sprot_id sp|Q53191|Y4TP_SINFN;
sprot_target db:uniprot_sprot|sp|Q53191|Y4TP_SINFN 4 312 evalue:1.5e-50 qcov:98.10 identity:35.30;
tm_num 6;
6530 5583 transmembrane_helix
ID metaerg.pl|10207
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology i5607-5675o5877-5945i6006-6074o6102-6170i6285-6353o6435-6503i;
6885 6631 CDS
ID metaerg.pl|10208
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Cribrihabitans;s__Cribrihabitans marinus;
genomedb_acc GCF_900109035.1;
genomedb_target db:genomedb|GCF_900109035.1|WP_092364460.1 1 84 evalue:3.9e-20 qcov:100.00 identity:59.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF04226;
pfam_desc Transglycosylase associated protein;
pfam_id Transgly_assoc;
pfam_target db:Pfam-A.hmm|PF04226.13 evalue:3.3e-12 score:45.7 best_domain_score:45.7 name:Transgly_assoc;
tm_num 3;
6885 6631 transmembrane_helix
ID metaerg.pl|10209
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology o6643-6702i6721-6789o6802-6870i;
8461 6977 CDS
ID metaerg.pl|10210
allgo_ids GO:0043190; GO:0042597; GO:0055085;
allko_ids K02035; K13889;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05668.1 15 494 evalue:2.1e-243 qcov:97.20 identity:84.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:2.2e-90 score:302.6 best_domain_score:302.0 name:SBP_bac_5;
sp YES;
sprot_desc Glutathione-binding protein GsiB;
sprot_id sp|Q6D3B0|GSIB_PECAS;
sprot_target db:uniprot_sprot|sp|Q6D3B0|GSIB_PECAS 9 388 evalue:3.2e-44 qcov:76.90 identity:33.20;
6977 7051 signal_peptide
ID metaerg.pl|10211
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
8651 10093 CDS
ID metaerg.pl|10212
allec_ids 3.5.1.-;
allgo_ids GO:0004040; GO:0009851;
allko_ids K01426;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05669.1 1 475 evalue:9.7e-209 qcov:99.00 identity:77.30;
kegg_pathway_id 00220; 00643; 00632; 00360; 00460; 00380;
kegg_pathway_name Urea cycle and metabolism of amino groups; Styrene degradation; Benzoate degradation via CoA ligation; Phenylalanine metabolism; Cyanoamino acid metabolism; Tryptophan metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY-1822; PWY-6548; PWY-0; PWY-5784; LYSDEGII-PWY; PWY-5327;
metacyc_pathway_name indole-3-acetate activation I;; ; putrescine degradation III;; indole-3-acetate inactivation VIII;; L-lysine degradation III;; superpathway of L-lysine degradation;;
metacyc_pathway_type Activation;; ; Putrescine-Degradation;; Indole-3-Acetate-Inactivation;; LYSINE-DEG;; LYSINE-DEG; Super-Pathways;;
pfam_acc PF01425;
pfam_desc Amidase;
pfam_id Amidase;
pfam_target db:Pfam-A.hmm|PF01425.21 evalue:1.2e-84 score:284.1 best_domain_score:283.3 name:Amidase;
sprot_desc Indoleacetamide hydrolase;
sprot_id sp|P59385|HYIN_BRADU;
sprot_target db:uniprot_sprot|sp|P59385|HYIN_BRADU 8 475 evalue:6.1e-101 qcov:97.50 identity:46.70;
10295 11353 CDS
ID metaerg.pl|10213
allgo_ids GO:0055085; GO:0009279; GO:0046930; GO:0015288; GO:0006811;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_074443840.1 1 348 evalue:2.0e-118 qcov:98.90 identity:61.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:6.8e-41 score:139.7 best_domain_score:139.4 name:DctP;
sp YES;
sprot_desc Outer membrane transporter protein TsaT;
sprot_id sp|Q8KR68|TSAT_COMTE;
sprot_target db:uniprot_sprot|sp|Q8KR68|TSAT_COMTE 3 332 evalue:8.7e-28 qcov:93.80 identity:26.70;
tm_num 1;
10295 10378 signal_peptide
ID metaerg.pl|10214
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
10295 11353 transmembrane_helix
ID metaerg.pl|10215
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology i10313-10381o;
11680 12291 CDS
ID metaerg.pl|10216
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07810.1 9 203 evalue:1.4e-63 qcov:96.10 identity:63.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:1.9e-20 score:72.4 best_domain_score:72.4 name:DctQ;
tm_num 4;
11680 12291 transmembrane_helix
ID metaerg.pl|10217
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology o11791-11859i11920-11982o12040-12108i12169-12237o;
12288 13811 CDS
ID metaerg.pl|10218
allgo_ids GO:0016021; GO:0005886; GO:0022857; GO:0015740;
allko_ids K11690;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07809.1 11 507 evalue:1.2e-201 qcov:98.00 identity:78.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:7.4e-87 score:291.1 best_domain_score:291.1 name:DctM;
sprot_desc C4-dicarboxylate TRAP transporter large permease protein DctM;
sprot_id sp|Q9HU16|DCTM_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HU16|DCTM_PSEAE 123 505 evalue:4.4e-49 qcov:75.50 identity:36.90;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:1.2e-87 score:293.4 best_domain_score:293.4 name:TIGR00786;
tm_num 14;
12288 13811 transmembrane_helix
ID metaerg.pl|10219
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology i12291-12359o12369-12437i12474-12542o12552-12620i12657-12716o12780-12848i12909-12977o13020-13088i13149-13205o13233-13292i13326-13394o13422-13490i13509-13562o13605-13673i;
16077 14020 CDS
ID metaerg.pl|10220
allec_ids 3.3.2.12; 1.2.1.91;
allgo_ids GO:0016491; GO:0055114; GO:0004300; GO:0016803; GO:0016823; GO:0016726; GO:0016620; GO:0010124;
allko_ids K02618;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE48912.1 1 681 evalue:0.0e+00 qcov:99.40 identity:81.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00171; PF01575; PF13452;
pfam_desc Aldehyde dehydrogenase family; MaoC like domain; N-terminal half of MaoC dehydratase;
pfam_id Aldedh; MaoC_dehydratas; MaoC_dehydrat_N;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:1.3e-60 score:204.4 best_domain_score:204.0 name:Aldedh; db:Pfam-A.hmm|PF01575.19 evalue:6e-24 score:83.2 best_domain_score:81.9 name:MaoC_dehydratas; db:Pfam-A.hmm|PF13452.6 evalue:5.3e-06 score:25.8 best_domain_score:24.5 name:MaoC_dehydrat_N;
sprot_desc Bifunctional protein PaaZ;
sprot_id sp|P77455|PAAZ_ECOLI;
sprot_target db:uniprot_sprot|sp|P77455|PAAZ_ECOLI 8 678 evalue:1.5e-196 qcov:98.00 identity:54.30;
tigrfam_acc TIGR02278;
tigrfam_desc phenylacetic acid degradation protein paaN;
tigrfam_name PaaN-DH;
tigrfam_target db:TIGRFAMs.hmm|TIGR02278 evalue:1.8e-303 score:1007.0 best_domain_score:1006.9 name:TIGR02278;
16885 16133 CDS
ID metaerg.pl|10221
allgo_ids GO:0010124;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ04724.1 1 250 evalue:1.0e-108 qcov:100.00 identity:79.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF05138;
pfam_desc Phenylacetic acid catabolic protein;
pfam_id PaaA_PaaC;
pfam_target db:Pfam-A.hmm|PF05138.12 evalue:1.5e-17 score:62.8 best_domain_score:62.6 name:PaaA_PaaC;
17999 16926 CDS
ID metaerg.pl|10222
allec_ids 1.-.-.-;
allgo_ids GO:0009055; GO:0051536; GO:0051537; GO:0050660; GO:0046872; GO:0010124;
allko_ids K15758; K00492; K00360; K00517; K14581; K00366; K00235; K00245; K00326; K00380; K16161; K00491; K15983; K10616; K00529; K07519; K00240; K02613;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE48910.1 1 357 evalue:7.0e-180 qcov:100.00 identity:86.60;
kegg_pathway_id 00622; 00626; 00920; 00624; 00020; 00621; 00910; 02020; 00623; 00360; 00190; 00340; 00071; 00680; 00720; 00150; 00632; 00120; 04020; 00361; 00940; 00903; 05014; 00330; 00530; 05012; 00350; 00650;
kegg_pathway_name Toluene and xylene degradation; Naphthalene and anthracene degradation; Sulfur metabolism; 1- and 2-Methylnaphthalene degradation; Citrate cycle (TCA cycle); Biphenyl degradation; Nitrogen metabolism; Two-component system - General; 2,4-Dichlorobenzoate degradation; Phenylalanine metabolism; Oxidative phosphorylation; Histidine metabolism; Fatty acid metabolism; Methane metabolism; Reductive carboxylate cycle (CO2 fixation); Androgen and estrogen metabolism; Benzoate degradation via CoA ligation; Bile acid biosynthesis; Calcium signaling pathway; gamma-Hexachlorocyclohexane degradation; Phenylpropanoid biosynthesis; Limonene and pinene degradation; Amyotrophic lateral sclerosis (ALS); Arginine and proline metabolism; Aminosugars metabolism; Parkinson's disease; Tyrosine metabolism; Butanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY-5469; PWY-5987; PWY-5479; PWY-6113; PWYG-321; PWY-4302; PWY-5271; PWY-5826; PWY-2821;
metacyc_pathway_name sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;;
metacyc_pathway_type LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;;
pfam_acc PF00970; PF00111; PF00175;
pfam_desc Oxidoreductase FAD-binding domain; 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase NAD-binding domain;
pfam_id FAD_binding_6; Fer2; NAD_binding_1;
pfam_target db:Pfam-A.hmm|PF00970.24 evalue:9.7e-09 score:34.7 best_domain_score:33.8 name:FAD_binding_6; db:Pfam-A.hmm|PF00111.27 evalue:2.6e-16 score:58.6 best_domain_score:57.8 name:Fer2; db:Pfam-A.hmm|PF00175.21 evalue:7e-18 score:64.5 best_domain_score:63.8 name:NAD_binding_1;
sprot_desc 1,2-phenylacetyl-CoA epoxidase, subunit E;
sprot_id sp|P76081|PAAE_ECOLI;
sprot_target db:uniprot_sprot|sp|P76081|PAAE_ECOLI 1 356 evalue:1.5e-75 qcov:99.70 identity:43.80;
tigrfam_acc TIGR02160;
tigrfam_desc phenylacetate-CoA oxygenase/reductase, PaaK subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name PA_CoA_Oxy5;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02160 evalue:1.9e-127 score:424.1 best_domain_score:423.9 name:TIGR02160;
18533 18009 CDS
ID metaerg.pl|10223
allgo_ids GO:0010124;
allko_ids K02612;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ04726.1 8 174 evalue:5.5e-69 qcov:96.00 identity:76.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF01883;
pfam_desc Iron-sulfur cluster assembly protein;
pfam_id FeS_assembly_P;
pfam_target db:Pfam-A.hmm|PF01883.19 evalue:1.1e-16 score:59.9 best_domain_score:58.6 name:FeS_assembly_P;
sprot_desc Putative 1,2-phenylacetyl-CoA epoxidase, subunit D;
sprot_id sp|P76080|PAAD_ECOLI;
sprot_target db:uniprot_sprot|sp|P76080|PAAD_ECOLI 7 174 evalue:3.7e-40 qcov:96.60 identity:49.40;
tigrfam_acc TIGR02159;
tigrfam_desc phenylacetate-CoA oxygenase, PaaJ subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name PA_CoA_Oxy4;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02159 evalue:2.1e-58 score:195.9 best_domain_score:195.7 name:TIGR02159;
19386 18538 CDS
ID metaerg.pl|10224
allgo_ids GO:0010124; GO:0005829;
allko_ids K02611;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_083195194.1 1 282 evalue:1.1e-132 qcov:100.00 identity:81.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF05138;
pfam_desc Phenylacetic acid catabolic protein;
pfam_id PaaA_PaaC;
pfam_target db:Pfam-A.hmm|PF05138.12 evalue:5.9e-98 score:326.4 best_domain_score:326.1 name:PaaA_PaaC;
sprot_desc 1,2-phenylacetyl-CoA epoxidase, subunit C;
sprot_id sp|P76079|PAAC_ECOLI;
sprot_target db:uniprot_sprot|sp|P76079|PAAC_ECOLI 43 282 evalue:1.4e-60 qcov:85.10 identity:47.50;
tigrfam_acc TIGR02158;
tigrfam_desc phenylacetate-CoA oxygenase, PaaI subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name PA_CoA_Oxy3;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02158 evalue:9.1e-87 score:289.9 best_domain_score:289.7 name:TIGR02158;
19670 19386 CDS
ID metaerg.pl|10225
allgo_ids GO:0010124;
allko_ids K02610;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068305384.1 1 94 evalue:1.4e-47 qcov:100.00 identity:94.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF06243;
pfam_desc Phenylacetic acid degradation B;
pfam_id PaaB;
pfam_target db:Pfam-A.hmm|PF06243.11 evalue:9.4e-40 score:134.0 best_domain_score:133.9 name:PaaB;
sprot_desc 1,2-phenylacetyl-CoA epoxidase, subunit B;
sprot_id sp|P76078|PAAB_ECOLI;
sprot_target db:uniprot_sprot|sp|P76078|PAAB_ECOLI 5 94 evalue:3.4e-32 qcov:95.70 identity:65.60;
tigrfam_acc TIGR02157;
tigrfam_desc phenylacetate-CoA oxygenase, PaaH subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name PA_CoA_Oxy2;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02157 evalue:1.9e-44 score:148.9 best_domain_score:148.7 name:TIGR02157;
20741 19752 CDS
ID metaerg.pl|10226
allec_ids 1.14.13.149;
allgo_ids GO:0010124; GO:0097266;
allko_ids K02609;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068305387.1 1 329 evalue:1.8e-177 qcov:100.00 identity:90.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF05138;
pfam_desc Phenylacetic acid catabolic protein;
pfam_id PaaA_PaaC;
pfam_target db:Pfam-A.hmm|PF05138.12 evalue:6.5e-101 score:336.1 best_domain_score:335.9 name:PaaA_PaaC;
sprot_desc 1,2-phenylacetyl-CoA epoxidase, subunit A;
sprot_id sp|P76077|PAAA_ECOLI;
sprot_target db:uniprot_sprot|sp|P76077|PAAA_ECOLI 21 321 evalue:7.1e-125 qcov:91.50 identity:67.80;
tigrfam_acc TIGR02156;
tigrfam_desc phenylacetate-CoA oxygenase, PaaG subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name PA_CoA_Oxy1;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02156 evalue:1e-157 score:522.8 best_domain_score:522.6 name:TIGR02156;
21975 20770 CDS
ID metaerg.pl|10227
allec_ids 2.3.1.174; 2.3.1.16;
allgo_ids GO:0016747; GO:0033812; GO:0003988; GO:0019619; GO:0042952; GO:0006635; GO:0010124;
allko_ids K02615; K07509; K00632; K00626; K07550; K07508; K07823; K07513;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109534058.1 1 401 evalue:3.7e-185 qcov:100.00 identity:81.00;
kegg_pathway_id 00632; 00120; 00380; 00592; 00640; 00650; 00620; 00062; 01040; 00362; 00310; 00280; 00281; 00071; 00072; 02020;
kegg_pathway_name Benzoate degradation via CoA ligation; Bile acid biosynthesis; Tryptophan metabolism; alpha-Linolenic acid metabolism; Propanoate metabolism; Butanoate metabolism; Pyruvate metabolism; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Fatty acid metabolism; Synthesis and degradation of ketone bodies; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY-561; PWY-6435; PWY-5183; PWY-5431; PWY-5181; PWY-6185; PWY-6182; PWY-2504; FAO-PWY; PWY-5417; PWY-2361; PWY-5136; PWY0-321; PWY-6071;
metacyc_pathway_name superpathway of glyoxylate cycle and fatty acid degradation;; 4-hydroxybenzoate biosynthesis III (plants);; superpathway of aerobic toluene degradation;; aromatic compounds degradation via β-ketoadipate;; toluene degradation III (aerobic) (via p-cresol);; 4-methylcatechol degradation (ortho cleavage);; superpathway of salicylate degradation;; superpathway of aromatic compound degradation via 3-oxoadipate;; fatty acid β-oxidation I;; catechol degradation III (ortho-cleavage pathway);; 3-oxoadipate degradation;; fatty acid β-oxidation II (peroxisome);; phenylacetate degradation I (aerobic);; superpathway of phenylethylamine degradation;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; 4-Hydroxybenzoate-Biosynthesis;; Super-Pathways; TOLUENE-DEG;; Catechol-Degradation; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Fatty-Acid-Degradation;; Catechol-Degradation; Super-Pathways;; CARBOXYLATES-DEG;; Fatty-Acid-Degradation;; Phenylacetate-Degradation;; AMINE-DEG; Phenolic-Compounds-Degradation; Super-Pathways;;
pfam_acc PF00109; PF02803; PF00108;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id ketoacyl-synt; Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:1.6e-06 score:27.1 best_domain_score:27.1 name:ketoacyl-synt; db:Pfam-A.hmm|PF02803.18 evalue:1.1e-43 score:147.0 best_domain_score:145.9 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:4.5e-73 score:245.0 best_domain_score:244.6 name:Thiolase_N;
sprot_desc Beta-ketoadipyl-CoA thiolase;
sprot_id sp|Q9I6R0|PCAF_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I6R0|PCAF_PSEAE 3 401 evalue:3.6e-155 qcov:99.50 identity:71.40;
tigrfam_acc TIGR01930; TIGR02430;
tigrfam_desc acetyl-CoA C-acyltransferase; 3-oxoadipyl-CoA thiolase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans; pcaF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:1.1e-132 score:441.8 best_domain_score:441.6 name:TIGR01930; db:TIGRFAMs.hmm|TIGR02430 evalue:4.3e-215 score:713.4 best_domain_score:713.2 name:TIGR02430;
22901 22023 CDS
ID metaerg.pl|10228
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ04730.1 1 268 evalue:4.5e-76 qcov:91.80 identity:59.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF07848; PF08223;
pfam_desc PaaX-like protein; PaaX-like protein C-terminal domain;
pfam_id PaaX; PaaX_C;
pfam_target db:Pfam-A.hmm|PF07848.12 evalue:7e-25 score:86.3 best_domain_score:85.0 name:PaaX; db:Pfam-A.hmm|PF08223.11 evalue:2.1e-19 score:68.9 best_domain_score:68.3 name:PaaX_C;
23040 23390 CDS
ID metaerg.pl|10229
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245429.1 5 116 evalue:1.2e-27 qcov:96.60 identity:56.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF04134;
pfam_desc Protein of unknown function, DUF393;
pfam_id DUF393;
pfam_target db:Pfam-A.hmm|PF04134.12 evalue:1e-22 score:80.8 best_domain_score:80.7 name:DUF393;
tm_num 1;
23040 23390 transmembrane_helix
ID metaerg.pl|10230
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology o23274-23342i;
23487 23783 CDS
ID metaerg.pl|10231
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07614.1 1 96 evalue:1.4e-37 qcov:98.00 identity:81.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF07045;
pfam_desc Domain of unknown function (DUF1330);
pfam_id DUF1330;
pfam_target db:Pfam-A.hmm|PF07045.11 evalue:2.8e-36 score:123.0 best_domain_score:122.8 name:DUF1330;
23858 24445 CDS
ID metaerg.pl|10232
allec_ids 4.2.1.19;
allgo_ids GO:0000105; GO:0004424; GO:0005737;
allko_ids K01693; K01089;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Mangrovicoccus;s__Mangrovicoccus sp003254465;
genomedb_acc GCF_003254465.1;
genomedb_target db:genomedb|GCF_003254465.1|WP_111404082.1 1 195 evalue:3.9e-92 qcov:100.00 identity:85.60;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PRPP-PWY; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; HISTIDINE-SYN;;
pfam_acc PF00475;
pfam_desc Imidazoleglycerol-phosphate dehydratase;
pfam_id IGPD;
pfam_target db:Pfam-A.hmm|PF00475.18 evalue:8.7e-69 score:229.6 best_domain_score:229.3 name:IGPD;
sprot_desc Imidazoleglycerol-phosphate dehydratase;
sprot_id sp|Q5LU92|HIS7_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LU92|HIS7_RUEPO 1 195 evalue:4.9e-89 qcov:100.00 identity:81.00;
24450 25091 CDS
ID metaerg.pl|10233
allec_ids 4.3.2.10; 2.4.2.-;
allgo_ids GO:0003824; GO:0009236; GO:0005737; GO:0004359; GO:0000107; GO:0016829; GO:0006541; GO:0000105;
allko_ids K02501;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07616.1 1 213 evalue:5.3e-90 qcov:100.00 identity:76.50;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id HISTSYN-PWY; PWY-5800; PRPP-PWY; PWY-5381;
metacyc_pathway_name L-histidine biosynthesis;; xylan biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;; pyridine nucleotide cycling (plants);;
metacyc_pathway_type HISTIDINE-SYN;; SECONDARY-CELL-WALL;; Super-Pathways;; NAD-Metabolism;;
pfam_acc PF00117; PF07685; PF01174;
pfam_desc Glutamine amidotransferase class-I; CobB/CobQ-like glutamine amidotransferase domain; SNO glutamine amidotransferase family;
pfam_id GATase; GATase_3; SNO;
pfam_target db:Pfam-A.hmm|PF00117.28 evalue:2.7e-16 score:59.1 best_domain_score:58.9 name:GATase; db:Pfam-A.hmm|PF07685.14 evalue:4.7e-05 score:22.3 best_domain_score:19.0 name:GATase_3; db:Pfam-A.hmm|PF01174.19 evalue:1e-06 score:28.0 best_domain_score:19.2 name:SNO;
sprot_desc Imidazole glycerol phosphate synthase subunit HisH;
sprot_id sp|O33565|HIS5_RHOS4;
sprot_target db:uniprot_sprot|sp|O33565|HIS5_RHOS4 1 213 evalue:2.2e-82 qcov:100.00 identity:68.50;
tigrfam_acc TIGR01855;
tigrfam_desc imidazole glycerol phosphate synthase, glutamine amidotransferase subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name IMP_synth_hisH;
tigrfam_sub1role Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01855 evalue:3.2e-55 score:186.2 best_domain_score:186.0 name:TIGR01855;
26799 25255 CDS
ID metaerg.pl|10234
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_108721782.1 1 514 evalue:6.5e-227 qcov:100.00 identity:84.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:2.3e-74 score:249.9 best_domain_score:151.9 name:DctM;
tm_num 15;
26799 25255 transmembrane_helix
ID metaerg.pl|10235
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology i25267-25371o25414-25482i25519-25587o25600-25668i25687-25755o25846-25914i25972-26040o26053-26097i26116-26178o26221-26289i26326-26394o26437-26505i26509-26562o26590-26658i26716-26784o;
27298 26789 CDS
ID metaerg.pl|10236
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_074443467.1 1 168 evalue:7.7e-68 qcov:99.40 identity:80.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:4.2e-19 score:68.0 best_domain_score:68.0 name:DctQ;
tm_num 4;
27298 26789 transmembrane_helix
ID metaerg.pl|10237
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology i26825-26893o26936-26995i27056-27124o27167-27235i;
28511 27414 CDS
ID metaerg.pl|10238
allgo_ids GO:0055085; GO:0042597; GO:0031317; GO:0046872; GO:0043177; GO:0005342; GO:0042803; GO:0015849;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_074443468.1 1 365 evalue:1.5e-182 qcov:100.00 identity:85.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:1.9e-41 score:141.5 best_domain_score:141.3 name:DctP;
sp YES;
sprot_desc Monocarboxylate 2-oxoacid-binding periplasmic protein all3028;
sprot_id sp|Q8YSQ6|TMBP_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YSQ6|TMBP_NOSS1 1 336 evalue:6.6e-63 qcov:92.10 identity:38.10;
tm_num 1;
27414 27488 signal_peptide
ID metaerg.pl|10239
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
28511 27414 transmembrane_helix
ID metaerg.pl|10240
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology i27432-27500o;
30237 28552 CDS
ID metaerg.pl|10241
allec_ids 4.2.1.49;
allgo_ids GO:0005737; GO:0016153; GO:0019556; GO:0019557;
allko_ids K01712;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08350.1 1 560 evalue:0.0e+00 qcov:99.80 identity:93.20;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id HISHP-PWY; HISDEG-PWY; PWY-5030; PWY-5028;
metacyc_pathway_name L-histidine degradation VI;; L-histidine degradation I;; L-histidine degradation III;; L-histidine degradation II;;
metacyc_pathway_type HISTIDINE-DEG;; HISTIDINE-DEG;; HISTIDINE-DEG;; HISTIDINE-DEG;;
pfam_acc PF01175; PF17392; PF17391;
pfam_desc Urocanase Rossmann-like domain; Urocanase C-terminal domain; Urocanase N-terminal domain;
pfam_id Urocanase; Urocanase_C; Urocanase_N;
pfam_target db:Pfam-A.hmm|PF01175.18 evalue:1.8e-83 score:278.6 best_domain_score:278.1 name:Urocanase; db:Pfam-A.hmm|PF17392.2 evalue:8.6e-92 score:305.2 best_domain_score:304.3 name:Urocanase_C; db:Pfam-A.hmm|PF17391.2 evalue:6.2e-59 score:196.5 best_domain_score:195.3 name:Urocanase_N;
sprot_desc Urocanate hydratase;
sprot_id sp|Q8U8Z9|HUTU_AGRFC;
sprot_target db:uniprot_sprot|sp|Q8U8Z9|HUTU_AGRFC 1 559 evalue:1.3e-296 qcov:99.60 identity:85.70;
tigrfam_acc TIGR01228;
tigrfam_desc urocanate hydratase;
tigrfam_mainrole Energy metabolism;
tigrfam_name hutU;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01228 evalue:1.4e-285 score:947.2 best_domain_score:946.9 name:TIGR01228;
31057 30239 CDS
ID metaerg.pl|10242
allec_ids 3.5.1.68;
allko_ids K01479;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodovulum;s__Rhodovulum kholense;
genomedb_acc GCF_003053725.1;
genomedb_target db:genomedb|GCF_003053725.1|WP_108027116.1 11 270 evalue:1.5e-105 qcov:95.60 identity:69.60;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY-5028;
metacyc_pathway_name L-histidine degradation II;;
metacyc_pathway_type HISTIDINE-DEG;;
pfam_acc PF05013;
pfam_desc N-formylglutamate amidohydrolase;
pfam_id FGase;
pfam_target db:Pfam-A.hmm|PF05013.12 evalue:1.3e-68 score:230.6 best_domain_score:230.4 name:FGase;
tigrfam_acc TIGR02017;
tigrfam_desc N-formylglutamate deformylase;
tigrfam_mainrole Energy metabolism;
tigrfam_name hutG_amidohyd;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR02017 evalue:4.6e-106 score:353.2 best_domain_score:353.0 name:TIGR02017;
32702 31185 CDS
ID metaerg.pl|10243
allec_ids 4.3.1.3;
allgo_ids GO:0005737; GO:0004397; GO:0019556; GO:0019557;
allko_ids K01745;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08346.1 1 503 evalue:1.1e-215 qcov:99.60 identity:80.10;
kegg_pathway_id 00910; 00340;
kegg_pathway_name Nitrogen metabolism; Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY-5030; HISDEG-PWY; HISHP-PWY; PWY-5028;
metacyc_pathway_name L-histidine degradation III;; L-histidine degradation I;; L-histidine degradation VI;; L-histidine degradation II;;
metacyc_pathway_type HISTIDINE-DEG;; HISTIDINE-DEG;; HISTIDINE-DEG;; HISTIDINE-DEG;;
pfam_acc PF00221;
pfam_desc Aromatic amino acid lyase;
pfam_id Lyase_aromatic;
pfam_target db:Pfam-A.hmm|PF00221.19 evalue:2.8e-174 score:579.4 best_domain_score:579.0 name:Lyase_aromatic;
sprot_desc Histidine ammonia-lyase;
sprot_id sp|Q5LRD8|HUTH_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LRD8|HUTH_RUEPO 2 495 evalue:8.2e-197 qcov:97.80 identity:74.80;
tigrfam_acc TIGR01225;
tigrfam_desc histidine ammonia-lyase;
tigrfam_mainrole Energy metabolism;
tigrfam_name hutH;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01225 evalue:2.1e-197 score:655.7 best_domain_score:655.5 name:TIGR01225;
33892 32696 CDS
ID metaerg.pl|10244
allec_ids 3.5.2.7;
allgo_ids GO:0016787; GO:0005737; GO:0050480; GO:0005506; GO:0008270; GO:0019556; GO:0019557;
allko_ids K01468;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sp003286075;
genomedb_acc GCA_003286075.1;
genomedb_target db:genomedb|GCA_003286075.1|QLUV01000002.1_19 5 391 evalue:4.6e-172 qcov:97.20 identity:78.10;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id HISDEG-PWY; PWY-5030; HISHP-PWY; PWY-5028;
metacyc_pathway_name L-histidine degradation I;; L-histidine degradation III;; L-histidine degradation VI;; L-histidine degradation II;;
metacyc_pathway_type HISTIDINE-DEG;; HISTIDINE-DEG;; HISTIDINE-DEG;; HISTIDINE-DEG;;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:1.1e-14 score:53.7 best_domain_score:51.2 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:5.8e-15 score:54.9 best_domain_score:51.3 name:Amidohydro_3;
sprot_desc Imidazolonepropionase;
sprot_id sp|Q1GC80|HUTI_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GC80|HUTI_RUEST 2 395 evalue:5.7e-153 qcov:99.00 identity:70.50;
tigrfam_acc TIGR01224;
tigrfam_desc imidazolonepropionase;
tigrfam_mainrole Energy metabolism;
tigrfam_name hutI;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01224 evalue:3.6e-132 score:439.9 best_domain_score:439.7 name:TIGR01224;
34091 35410 CDS
ID metaerg.pl|10245
allec_ids 3.5.3.13;
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sp003286075;
genomedb_acc GCA_003286075.1;
genomedb_target db:genomedb|GCA_003286075.1|QLUV01000002.1_20 1 439 evalue:1.0e-196 qcov:100.00 identity:80.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY-5028;
metacyc_pathway_name L-histidine degradation II;;
metacyc_pathway_type HISTIDINE-DEG;;
pfam_acc PF01979;
pfam_desc Amidohydrolase family;
pfam_id Amidohydro_1;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:1.1e-27 score:96.5 best_domain_score:96.2 name:Amidohydro_1;
tigrfam_acc TIGR02022;
tigrfam_desc formiminoglutamate deiminase;
tigrfam_mainrole Energy metabolism;
tigrfam_name hutF;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR02022 evalue:5.5e-157 score:522.3 best_domain_score:522.0 name:TIGR02022;
35400 36110 CDS
ID metaerg.pl|10246
allgo_ids GO:0003700; GO:0006355;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_083204239.1 2 236 evalue:1.4e-80 qcov:99.60 identity:63.40;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00392; PF07702;
pfam_desc Bacterial regulatory proteins, gntR family; UTRA domain;
pfam_id GntR; UTRA;
pfam_target db:Pfam-A.hmm|PF00392.21 evalue:1.2e-14 score:52.9 best_domain_score:50.9 name:GntR; db:Pfam-A.hmm|PF07702.13 evalue:2.5e-27 score:94.7 best_domain_score:94.0 name:UTRA;
37942 36164 CDS
ID metaerg.pl|10247
allgo_ids GO:0016021; GO:0055085; GO:0005886; GO:0008324; GO:0006813;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06586.1 1 592 evalue:3.7e-250 qcov:100.00 identity:78.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF03600; PF02080;
pfam_desc Citrate transporter; TrkA-C domain;
pfam_id CitMHS; TrkA_C;
pfam_target db:Pfam-A.hmm|PF03600.16 evalue:4.8e-41 score:140.1 best_domain_score:119.3 name:CitMHS; db:Pfam-A.hmm|PF02080.21 evalue:4e-24 score:83.5 best_domain_score:45.8 name:TrkA_C;
sprot_desc Uncharacterized transporter sll0640;
sprot_id sp|P72958|Y640_SYNY3;
sprot_target db:uniprot_sprot|sp|P72958|Y640_SYNY3 29 590 evalue:3.2e-75 qcov:94.90 identity:33.00;
tm_num 13;
37942 36164 transmembrane_helix
ID metaerg.pl|10248
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology o36191-36244i36257-36325o36353-36421i36458-36511o36524-36577i36596-36664o36707-36775i37370-37465o37508-37576i37595-37663o37676-37744i37757-37825o37868-37936i;
38885 37929 CDS
ID metaerg.pl|10249
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06587.1 7 292 evalue:1.5e-93 qcov:89.90 identity:66.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:7.7e-19 score:67.5 best_domain_score:42.2 name:EamA;
tm_num 10;
38885 37929 transmembrane_helix
ID metaerg.pl|10250
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology i37941-38009o38037-38105i38124-38192o38205-38273i38307-38375o38385-38453i38487-38555o38583-38648i38661-38729o38742-38795i;
39721 38885 CDS
ID metaerg.pl|10251
allec_ids 3.1.4.16;
allgo_ids GO:0005737; GO:0008663; GO:0004113; GO:0046872;
allko_ids K09769;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06588.1 1 270 evalue:1.2e-131 qcov:97.10 identity:84.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF13277;
pfam_desc YmdB-like protein;
pfam_id YmdB;
pfam_target db:Pfam-A.hmm|PF13277.6 evalue:4.6e-95 score:317.0 best_domain_score:316.8 name:YmdB;
sprot_desc 2',3'-cyclic-nucleotide 2'-phosphodiesterase;
sprot_id sp|O31775|YMDB_BACSU;
sprot_target db:uniprot_sprot|sp|O31775|YMDB_BACSU 1 259 evalue:1.1e-57 qcov:93.20 identity:43.60;
40584 39781 CDS
ID metaerg.pl|10252
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06802.1 5 260 evalue:5.2e-95 qcov:95.90 identity:68.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF11927;
pfam_desc Protein of unknown function (DUF3445);
pfam_id DUF3445;
pfam_target db:Pfam-A.hmm|PF11927.8 evalue:1.4e-49 score:168.0 best_domain_score:166.7 name:DUF3445;
41289 40675 CDS
ID metaerg.pl|10253
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE49266.1 1 196 evalue:3.4e-62 qcov:96.10 identity:63.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF17932; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_24; TetR_N;
pfam_target db:Pfam-A.hmm|PF17932.1 evalue:2.9e-21 score:75.1 best_domain_score:74.2 name:TetR_C_24; db:Pfam-A.hmm|PF00440.23 evalue:1.5e-14 score:52.7 best_domain_score:52.0 name:TetR_N;
42764 41451 CDS
ID metaerg.pl|10254
allec_ids 6.2.1.30;
allgo_ids GO:0003824; GO:0005524; GO:0047475; GO:0010124;
allko_ids K01912; K00143; K01652; K01897;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07816.1 1 437 evalue:1.0e-225 qcov:100.00 identity:88.30;
kegg_pathway_id 00071; 00300; 00360; 00660; 00650; 00770; 00290; 00310;
kegg_pathway_name Fatty acid metabolism; Lysine biosynthesis; Phenylalanine metabolism; C5-Branched dibasic acid metabolism; Butanoate metabolism; Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine biosynthesis; Lysine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY-6071; PWY0-321; BENZCOA-PWY;
metacyc_pathway_name superpathway of phenylethylamine degradation;; phenylacetate degradation I (aerobic);; anaerobic aromatic compound degradation (Thauera aromatica);;
metacyc_pathway_type AMINE-DEG; Phenolic-Compounds-Degradation; Super-Pathways;; Phenylacetate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;;
pfam_acc PF00501; PF14535;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C_2;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:1.9e-16 score:58.9 best_domain_score:56.2 name:AMP-binding; db:Pfam-A.hmm|PF14535.6 evalue:6.8e-27 score:92.9 best_domain_score:92.1 name:AMP-binding_C_2;
sprot_desc Phenylacetate-coenzyme A ligase;
sprot_id sp|Q9L9C1|PAAK_AZOEV;
sprot_target db:uniprot_sprot|sp|Q9L9C1|PAAK_AZOEV 5 436 evalue:1.6e-180 qcov:98.90 identity:71.60;
tigrfam_acc TIGR02155;
tigrfam_desc phenylacetate-CoA ligase;
tigrfam_mainrole Energy metabolism;
tigrfam_name PA_CoA_ligase;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02155 evalue:8.7e-223 score:738.6 best_domain_score:738.4 name:TIGR02155;
43207 42773 CDS
ID metaerg.pl|10255
allec_ids 3.1.2.-;
allgo_ids GO:0016289; GO:0010124;
allko_ids K02614;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Rhizobium;s__Rhizobium sp900469475;
genomedb_acc GCA_900469475.1;
genomedb_target db:genomedb|GCA_900469475.1|UBXG01000009.1_170 1 141 evalue:4.1e-54 qcov:97.90 identity:73.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY-5837; PWY-6320; PWY-5840; PWY-5863; PWY-5898; PWY-5860; PWY-5896; PWY-5845; PWY-5862; PWY-5996; PWY-5897; ALL-CHORISMATE-PWY; PWY0-1337; PWY-5850; PWY-5899; PWY-5838; PWY-5861; PWY-5791; PWY-6453; PWY-981;
metacyc_pathway_name 2-carboxy-1,4-naphthoquinol biosynthesis;; phaselate biosynthesis;; superpathway of menaquinol-7 biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-12 biosynthesis;; superpathway of demethylmenaquinol-6 biosynthesis I;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; oleate biosynthesis II (animals and fungi);; superpathway of menaquinol-11 biosynthesis;; superpathway of chorismate metabolism;; oleate β-oxidation;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; superpathway of demethylmenaquinol-8 biosynthesis I;; ; stigma estolide biosynthesis;; salicylate biosynthesis II;;
metacyc_pathway_type DHNA-Biosynthesis;; AROMATIC-COMPOUNDS-BIOSYN;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Oleate-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Super-Pathways;; Fatty-Acid-Degradation;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; ; Lipid-Biosynthesis;; Salicylate-Biosynthesis;;
pfam_acc PF03061;
pfam_desc Thioesterase superfamily;
pfam_id 4HBT;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:2.4e-10 score:39.8 best_domain_score:38.9 name:4HBT;
sprot_desc Acyl-coenzyme A thioesterase PaaI;
sprot_id sp|P76084|PAAI_ECOLI;
sprot_target db:uniprot_sprot|sp|P76084|PAAI_ECOLI 10 138 evalue:1.3e-25 qcov:89.60 identity:45.00;
tigrfam_acc TIGR00369; TIGR02286;
tigrfam_desc uncharacterized domain 1; phenylacetic acid degradation protein PaaD;
tigrfam_name unchar_dom_1; PaaD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00369 evalue:3.9e-22 score:77.7 best_domain_score:77.5 name:TIGR00369; db:TIGRFAMs.hmm|TIGR02286 evalue:6.3e-46 score:154.4 best_domain_score:154.1 name:TIGR02286;
44104 43211 CDS
ID metaerg.pl|10256
allec_ids 5.3.3.18; 4.2.1.17;
allgo_ids GO:0003824; GO:0042802; GO:0016853; GO:0016829; GO:0010124;
allko_ids K07514; K01825; K10527; K07515; K01692; K00022; K07516; K01782; K15016; K13767; K15866;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07814.1 36 296 evalue:1.9e-101 qcov:87.90 identity:74.80;
kegg_pathway_id 00632; 00930; 00380; 00310; 00280; 00281; 00640; 00650; 00071; 00592; 00410; 01040; 00903; 00062;
kegg_pathway_name Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Propanoate metabolism; Butanoate metabolism; Fatty acid metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Fatty acid elongation in mitochondria;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id ILEUDEG-PWY; FAO-PWY; PWY-5136; PWY-561; PWY-6435; VALDEG-PWY; P3-PWY; PWY-5138;
metacyc_pathway_name L-isoleucine degradation I;; fatty acid β-oxidation I;; fatty acid β-oxidation II (peroxisome);; superpathway of glyoxylate cycle and fatty acid degradation;; 4-hydroxybenzoate biosynthesis III (plants);; L-valine degradation I;; gallate degradation III (anaerobic);; unsaturated, even numbered fatty acid β-oxidation;;
metacyc_pathway_type ISOLEUCINE-DEG;; Fatty-Acid-Degradation;; Fatty-Acid-Degradation;; Energy-Metabolism; Super-Pathways;; 4-Hydroxybenzoate-Biosynthesis;; VALINE-DEG;; GALLATE-DEG;; Fatty-Acid-Degradation;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:1.9e-61 score:206.8 best_domain_score:206.5 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:3.1e-32 score:111.6 best_domain_score:97.4 name:ECH_2;
sprot_desc 1,2-epoxyphenylacetyl-CoA isomerase;
sprot_id sp|P77467|PAAG_ECOLI;
sprot_target db:uniprot_sprot|sp|P77467|PAAG_ECOLI 42 297 evalue:6.3e-72 qcov:86.20 identity:56.80;
tigrfam_acc TIGR02280;
tigrfam_desc phenylacetate degradation probable enoyl-CoA hydratase PaaB;
tigrfam_name PaaB1;
tigrfam_target db:TIGRFAMs.hmm|TIGR02280 evalue:5.9e-121 score:402.0 best_domain_score:401.7 name:TIGR02280;
44298 44801 CDS
ID metaerg.pl|10257
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08150.1 1 167 evalue:3.8e-75 qcov:100.00 identity:78.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF10722;
pfam_desc Putative bacterial sensory transduction regulator;
pfam_id YbjN;
pfam_target db:Pfam-A.hmm|PF10722.9 evalue:2.1e-29 score:101.4 best_domain_score:101.2 name:YbjN;
44830 45642 CDS
ID metaerg.pl|10258
allec_ids 1.5.1.2;
allgo_ids GO:0005737; GO:0004735; GO:0055129; GO:0006561;
allko_ids K00286;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE49430.1 1 270 evalue:2.8e-96 qcov:100.00 identity:74.40;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PROSYN-PWY; ARG-PRO-PWY; PWY-3341; ARGORNPROST-PWY; PWY-4981;
metacyc_pathway_name L-proline biosynthesis I;; L-arginine degradation VI (arginase 2 pathway);; L-proline biosynthesis III;; L-arginine degradation (Stickland reaction);; L-proline biosynthesis II (from arginine);;
metacyc_pathway_type PROLINE-SYN;; ARGININE-DEG; PROLINE-SYN;; PROLINE-SYN;; ARGININE-DEG; Super-Pathways;; PROLINE-SYN;;
pfam_acc PF03807; PF14748;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; Pyrroline-5-carboxylate reductase dimerisation;
pfam_id F420_oxidored; P5CR_dimer;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:9.3e-08 score:31.8 best_domain_score:30.3 name:F420_oxidored; db:Pfam-A.hmm|PF14748.6 evalue:2.4e-32 score:110.5 best_domain_score:110.5 name:P5CR_dimer;
sprot_desc Pyrroline-5-carboxylate reductase;
sprot_id sp|P22008|P5CR_PSEAE;
sprot_target db:uniprot_sprot|sp|P22008|P5CR_PSEAE 11 270 evalue:6.2e-34 qcov:96.30 identity:41.40;
tigrfam_acc TIGR00112;
tigrfam_desc pyrroline-5-carboxylate reductase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name proC;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00112 evalue:1.2e-69 score:234.0 best_domain_score:233.8 name:TIGR00112;
45639 45995 CDS
ID metaerg.pl|10259
allgo_ids GO:0000049; GO:0017101; GO:0005737; GO:0015031; GO:0006418;
allko_ids K06878;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ponticoccus;s__Ponticoccus marisrubri;
genomedb_acc GCF_001482405.1;
genomedb_target db:genomedb|GCF_001482405.1|WP_058862775.1 9 117 evalue:2.7e-43 qcov:92.40 identity:82.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF01588;
pfam_desc Putative tRNA binding domain;
pfam_id tRNA_bind;
pfam_target db:Pfam-A.hmm|PF01588.20 evalue:1.9e-13 score:49.6 best_domain_score:49.4 name:tRNA_bind;
sprot_desc Probable chaperone CsaA;
sprot_id sp|P37584|CSAA_BACSU;
sprot_target db:uniprot_sprot|sp|P37584|CSAA_BACSU 13 117 evalue:2.0e-29 qcov:89.00 identity:59.00;
tigrfam_acc TIGR02222;
tigrfam_desc export-related chaperone protein CsaA;
tigrfam_mainrole Protein fate;
tigrfam_name chap_CsaA;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02222 evalue:1.7e-45 score:152.6 best_domain_score:152.4 name:TIGR02222;
46031 46990 CDS
ID metaerg.pl|10260
allec_ids 1.1.1.26;
allgo_ids GO:0016616; GO:0051287; GO:0055114; GO:0005737; GO:0047964;
allko_ids K00050; K00018; K00058; K00015;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08147.1 1 318 evalue:9.2e-131 qcov:99.70 identity:76.40;
kegg_pathway_id 00260; 00630;
kegg_pathway_name Glycine, serine and threonine metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00389; PF02826; PF03446;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id 2-Hacid_dh; 2-Hacid_dh_C; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF00389.30 evalue:3.4e-20 score:71.3 best_domain_score:71.1 name:2-Hacid_dh; db:Pfam-A.hmm|PF02826.19 evalue:3.4e-55 score:185.4 best_domain_score:184.3 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF03446.15 evalue:5e-06 score:26.0 best_domain_score:24.7 name:NAD_binding_2;
sprot_desc Glyoxylate reductase;
sprot_id sp|B6YWH0|GYAR_THEON;
sprot_target db:uniprot_sprot|sp|B6YWH0|GYAR_THEON 2 318 evalue:1.9e-58 qcov:99.40 identity:40.80;
47512 47198 CDS
ID metaerg.pl|10261
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH29158.1 6 102 evalue:7.4e-37 qcov:93.30 identity:82.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
48269 47523 CDS
ID metaerg.pl|10262
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter sp000526275;
genomedb_acc GCF_000526275.1;
genomedb_target db:genomedb|GCF_000526275.1|WP_024810158.1 4 234 evalue:7.1e-54 qcov:93.10 identity:55.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF13472;
pfam_desc GDSL-like Lipase/Acylhydrolase family;
pfam_id Lipase_GDSL_2;
pfam_target db:Pfam-A.hmm|PF13472.6 evalue:9.8e-11 score:41.6 best_domain_score:41.1 name:Lipase_GDSL_2;
49119 48283 CDS
ID metaerg.pl|10263
allec_ids 2.3.1.117;
allgo_ids GO:0005737; GO:0008666; GO:0019877; GO:0009089;
allko_ids K00674;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__QY30;s__QY30 sp002356635;
genomedb_acc GCF_002356635.1;
genomedb_target db:genomedb|GCF_002356635.1|WP_096517633.1 1 278 evalue:1.7e-133 qcov:100.00 identity:86.70;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY0-781; DAPLYSINESYN-PWY; P4-PWY;
metacyc_pathway_name aspartate superpathway;; L-lysine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;;
metacyc_pathway_type Super-Pathways;; LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00132; PF14602; PF14805;
pfam_desc Bacterial transferase hexapeptide (six repeats); Hexapeptide repeat of succinyl-transferase; Tetrahydrodipicolinate N-succinyltransferase N-terminal;
pfam_id Hexapep; Hexapep_2; THDPS_N_2;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:2.1e-12 score:45.5 best_domain_score:24.4 name:Hexapep; db:Pfam-A.hmm|PF14602.6 evalue:1e-12 score:46.8 best_domain_score:46.8 name:Hexapep_2; db:Pfam-A.hmm|PF14805.6 evalue:7.8e-25 score:86.1 best_domain_score:85.4 name:THDPS_N_2;
sprot_desc 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase;
sprot_id sp|A4WNJ4|DAPD_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WNJ4|DAPD_RHOS5 8 278 evalue:5.0e-103 qcov:97.50 identity:86.00;
tigrfam_acc TIGR00965;
tigrfam_desc 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapD;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00965 evalue:1.1e-125 score:417.7 best_domain_score:417.5 name:TIGR00965;
49198 50040 CDS
ID metaerg.pl|10264
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06646.1 1 279 evalue:2.3e-109 qcov:99.60 identity:71.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF18306; PF03641;
pfam_desc SLOG cluster4 family; Possible lysine decarboxylase;
pfam_id LDcluster4; Lysine_decarbox;
pfam_target db:Pfam-A.hmm|PF18306.1 evalue:3.9e-10 score:38.7 best_domain_score:38.1 name:LDcluster4; db:Pfam-A.hmm|PF03641.14 evalue:2.4e-32 score:111.0 best_domain_score:109.9 name:Lysine_decarbox;
tigrfam_acc TIGR00730;
tigrfam_desc TIGR00730 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00730;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00730 evalue:2.1e-28 score:98.4 best_domain_score:98.0 name:TIGR00730;
52992 50728 CDS
ID metaerg.pl|10265
allgo_ids GO:0005515;
allko_ids K11711; K07642; K02484; K04486; K11640; K11356; K07708; K07645; K07677; K08282; K07704; K10909; K11231; K07643; K02491; K07682; K07649; K00936; K07777; K07654; K07637; K03407; K07639; K08475; K07673; K01120; K13598; K07641; K07646; K07652; K11633; K07768; K07778; K11354; K07683; K13533; K11328; K00873; K07711; K08884; K07648; K07679; K02478; K07718; K07698; K07651; K11623; K01769; K06379; K07676; K10681; K07650; K07709; K13532; K07644; K11520; K14509; K07769; K12767; K11383; K02486; K02342; K10125; K11629; K02476; K11357; K11617; K04757; K10942; K13040; K07647; K07680; K07675; K07717; K03388; K02668; K10916; K08479; K07674; K11614; K07716; K02489; K07697; K07656; K01768; K07710; K07640; K02480; K02482; K08801; K14489; K07636; K07653; K07638; K07701; K11527; K02030; K13587; K10715; K07678;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06647.1 1 706 evalue:4.0e-233 qcov:93.60 identity:60.80;
kegg_pathway_id 00340; 00790; 03090; 00620; 04011; 02020; 03030; 00230; 05111; 00710; 00010;
kegg_pathway_name Histidine metabolism; Folate biosynthesis; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; DNA replication; Purine metabolism; Vibrio cholerae pathogenic cycle; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF01590; PF02518; PF00512; PF00989; PF08448; PF13188; PF00072;
pfam_desc GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS domain; Response regulator receiver domain;
pfam_id GAF; HATPase_c; HisKA; PAS; PAS_4; PAS_8; Response_reg;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:8.8e-08 score:32.1 best_domain_score:30.5 name:GAF; db:Pfam-A.hmm|PF02518.26 evalue:3e-30 score:104.2 best_domain_score:102.8 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:6.8e-18 score:63.7 best_domain_score:62.9 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:8e-06 score:25.1 best_domain_score:23.6 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:1.1e-06 score:28.1 best_domain_score:26.9 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:5e-06 score:25.7 best_domain_score:23.8 name:PAS_8; db:Pfam-A.hmm|PF00072.24 evalue:3.5e-22 score:77.9 best_domain_score:76.6 name:Response_reg;
53293 54459 CDS
ID metaerg.pl|10266
allec_ids 3.5.1.18;
allgo_ids GO:0016787; GO:0050897; GO:0008237; GO:0009014; GO:0008270; GO:0019877; GO:0009089;
allko_ids K01439;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE47326.1 12 388 evalue:1.1e-154 qcov:97.20 identity:73.70;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id P4-PWY; PWY0-781; DAPLYSINESYN-PWY;
metacyc_pathway_name superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; aspartate superpathway;; L-lysine biosynthesis I;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; LYSINE-SYN;;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:6.6e-19 score:67.1 best_domain_score:66.0 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:5.2e-38 score:130.1 best_domain_score:129.8 name:Peptidase_M20;
sprot_desc Succinyl-diaminopimelate desuccinylase;
sprot_id sp|A4WNJ6|DAPE_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WNJ6|DAPE_RHOS5 12 387 evalue:6.8e-143 qcov:96.90 identity:67.80;
54610 56871 CDS
ID metaerg.pl|10267
allec_ids 3.1.13.1;
allgo_ids GO:0003723; GO:0004540; GO:0005829; GO:0034458; GO:0000175; GO:0016896; GO:0008859; GO:0008997; GO:0006402; GO:0034470; GO:0009405; GO:0009409;
allko_ids K12573;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06649.1 1 747 evalue:5.3e-302 qcov:99.20 identity:72.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY0-1479;
metacyc_pathway_name tRNA processing;;
metacyc_pathway_type Nucleic-Acid-Processing;;
pfam_acc PF17876; PF00773; PF00575;
pfam_desc Cold shock domain; RNB domain; S1 RNA binding domain;
pfam_id CSD2; RNB; S1;
pfam_target db:Pfam-A.hmm|PF17876.1 evalue:1.5e-11 score:43.6 best_domain_score:40.1 name:CSD2; db:Pfam-A.hmm|PF00773.19 evalue:7.8e-89 score:297.4 best_domain_score:297.1 name:RNB; db:Pfam-A.hmm|PF00575.23 evalue:2.9e-10 score:39.6 best_domain_score:38.3 name:S1;
sprot_desc Ribonuclease R;
sprot_id sp|P21499|RNR_ECOLI;
sprot_target db:uniprot_sprot|sp|P21499|RNR_ECOLI 112 696 evalue:8.4e-97 qcov:77.70 identity:38.10;
tigrfam_acc TIGR00358; TIGR02063;
tigrfam_desc VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R;
tigrfam_mainrole Transcription; Transcription;
tigrfam_name 3_prime_RNase; RNase_R;
tigrfam_sub1role Degradation of RNA; Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00358 evalue:2.3e-139 score:464.8 best_domain_score:464.4 name:TIGR00358; db:TIGRFAMs.hmm|TIGR02063 evalue:3.3e-189 score:629.8 best_domain_score:629.6 name:TIGR02063;
58897 57275 CDS
ID metaerg.pl|10268
allec_ids 6.2.1.1;
allgo_ids GO:0003824; GO:0005777; GO:0003987; GO:0047760; GO:0006083; GO:0019605; GO:0006097;
allko_ids K01895; K01904; K01909; K01897; K01652; K01776; K03367; K00143; K02364; K00992; K01779; K01586; K05939; K01913;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07695.1 1 539 evalue:2.0e-263 qcov:99.80 identity:81.60;
kegg_pathway_id 00071; 00660; 00471; 00252; 00251; 00473; 01053; 00930; 00770; 00290; 00564; 00281; 00010; 00310; 00300; 00960; 00650; 00640; 00903; 00620; 00632; 00940; 00720;
kegg_pathway_name Fatty acid metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Alanine and aspartate metabolism; Glutamate metabolism; D-Alanine metabolism; Biosynthesis of siderophore group nonribosomal peptides; Caprolactam degradation; Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine biosynthesis; Glycerophospholipid metabolism; Geraniol degradation; Glycolysis / Gluconeogenesis; Lysine degradation; Lysine biosynthesis; Alkaloid biosynthesis II; Butanoate metabolism; Propanoate metabolism; Limonene and pinene degradation; Pyruvate metabolism; Benzoate degradation via CoA ligation; Phenylpropanoid biosynthesis; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id ACETATEUTIL-PWY; GLUDEG-II-PWY; PWY66-21; PWY0-1313; PWY66-162; PWY66-161;
metacyc_pathway_name superpathway of acetate utilization and formation;; L-glutamate degradation VII (to butanoate);; ethanol degradation II;; acetate conversion to acetyl-CoA;; ethanol degradation IV;; ethanol degradation III;;
metacyc_pathway_type CARBOXYLATES-DEG; Super-Pathways;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Ethanol-Degradation;; CARBOXYLATES-DEG;; Ethanol-Degradation;; Ethanol-Degradation;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:4.5e-87 score:291.6 best_domain_score:291.3 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:2.3e-21 score:75.8 best_domain_score:74.4 name:AMP-binding_C;
sprot_desc Acetate/butyrate--CoA ligase AAE7, peroxisomal;
sprot_id sp|Q8VZF1|AEE7_ARATH;
sprot_target db:uniprot_sprot|sp|Q8VZF1|AEE7_ARATH 6 540 evalue:7.3e-151 qcov:99.10 identity:50.50;
59168 59896 CDS
ID metaerg.pl|10269
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07694.1 1 228 evalue:2.1e-55 qcov:94.20 identity:49.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF13403;
pfam_desc Hint domain;
pfam_id Hint_2;
pfam_target db:Pfam-A.hmm|PF13403.6 evalue:6.7e-21 score:74.3 best_domain_score:73.7 name:Hint_2;
62266 60071 CDS
ID metaerg.pl|10270
allec_ids 4.2.1.17; 5.1.2.3; 1.1.1.35;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0005737; GO:0008692; GO:0004300; GO:0051287; GO:0006635;
allko_ids K07511; K07515; K10527; K01825; K07514; K13767; K13816; K05556; K15016; K01782; K07516; K00022; K01692;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07693.1 1 731 evalue:0.0e+00 qcov:100.00 identity:85.00;
kegg_pathway_id 00632; 00930; 00380; 00310; 00280; 00281; 00640; 00650; 01057; 00071; 00592; 00410; 01040; 00903; 00062;
kegg_pathway_name Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Propanoate metabolism; Butanoate metabolism; Biosynthesis of type II polyketide products; Fatty acid metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Fatty acid elongation in mitochondria;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id TRYPTOPHAN-DEGRADATION-1; PWY-5138; P3-PWY; VALDEG-PWY; PWY-5789; PWY-5184; PWY-561; CENTFERM-PWY; PWY-6435; PWY-5177; GLUDEG-II-PWY; PWY-5136; ILEUDEG-PWY; FAO-PWY;
metacyc_pathway_name L-tryptophan degradation III (eukaryotic);; unsaturated, even numbered fatty acid β-oxidation;; gallate degradation III (anaerobic);; L-valine degradation I;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; toluene degradation VI (anaerobic);; superpathway of glyoxylate cycle and fatty acid degradation;; pyruvate fermentation to butanoate;; 4-hydroxybenzoate biosynthesis III (plants);; glutaryl-CoA degradation;; L-glutamate degradation VII (to butanoate);; fatty acid β-oxidation II (peroxisome);; L-isoleucine degradation I;; fatty acid β-oxidation I;;
metacyc_pathway_type Super-Pathways; TRYPTOPHAN-DEG;; Fatty-Acid-Degradation;; GALLATE-DEG;; VALINE-DEG;; Autotrophic-CO2-Fixation;; Super-Pathways; TOLUENE-DEG;; Energy-Metabolism; Super-Pathways;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;; 4-Hydroxybenzoate-Biosynthesis;; CARBOXYLATES-DEG;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Fatty-Acid-Degradation;; ISOLEUCINE-DEG;; Fatty-Acid-Degradation;;
pfam_acc PF00725; PF02737; PF00378; PF16113; PF03446; PF03721;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase; NAD binding domain of 6-phosphogluconate dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain;
pfam_id 3HCDH; 3HCDH_N; ECH_1; ECH_2; NAD_binding_2; UDPG_MGDP_dh_N;
pfam_target db:Pfam-A.hmm|PF00725.22 evalue:9.4e-29 score:99.1 best_domain_score:78.0 name:3HCDH; db:Pfam-A.hmm|PF02737.18 evalue:4.6e-63 score:211.6 best_domain_score:211.0 name:3HCDH_N; db:Pfam-A.hmm|PF00378.20 evalue:5e-26 score:90.8 best_domain_score:87.7 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:7.7e-13 score:47.9 best_domain_score:46.9 name:ECH_2; db:Pfam-A.hmm|PF03446.15 evalue:4.1e-05 score:23.0 best_domain_score:21.7 name:NAD_binding_2; db:Pfam-A.hmm|PF03721.14 evalue:4.5e-05 score:22.3 best_domain_score:21.4 name:UDPG_MGDP_dh_N;
sprot_desc Fatty acid oxidation complex subunit alpha;
sprot_id sp|A1S7L6|FADJ_SHEAM;
sprot_target db:uniprot_sprot|sp|A1S7L6|FADJ_SHEAM 4 723 evalue:2.4e-120 qcov:98.50 identity:36.20;
63490 62279 CDS
ID metaerg.pl|10271
allec_ids 2.3.1.-; 2.3.1.16;
allgo_ids GO:0016747; GO:0005618; GO:0005886; GO:0003985; GO:0003988; GO:0006635;
allko_ids K00626; K07509; K00632; K02615; K07550; K07513; K07508; K07823;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109534507.1 1 403 evalue:9.0e-208 qcov:100.00 identity:90.60;
kegg_pathway_id 00310; 00281; 00280; 02020; 00072; 00071; 00120; 00632; 00380; 01040; 00362; 00620; 00062; 00640; 00650; 00592;
kegg_pathway_name Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Two-component system - General; Synthesis and degradation of ketone bodies; Fatty acid metabolism; Bile acid biosynthesis; Benzoate degradation via CoA ligation; Tryptophan metabolism; Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation; Pyruvate metabolism; Fatty acid elongation in mitochondria; Propanoate metabolism; Butanoate metabolism; alpha-Linolenic acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY-6411; PWY-5987; PWY-5268; PWY0-881; PWY-5140; PWY-5136; PWY-5313; PWY-6404; CENTBENZCOA-PWY; PWY-6316; PWY-5284; PWY-6295; P3-PWY; PWY-6515; ECASYN-PWY; PWY-84; PWY-6438; THREOCAT-PWY; KDO-LIPASYN-PWY; PWY-6412; PWY-5393; PWY-5972; PWY-5405; PWY-6318; PWY-5307; PWY-5400; PWY-5965; PWY-5209; LPSSYN-PWY; PWY1A0-6325; PWY-6432; PWYG-321; FASYN-INITIAL-PWY; PWY-6413; FAO-PWY; PWY-6113; PWY-5437; PWY-5981; PWY-5477; PWY-6310; PWY-5139; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5080; PWY-6397; PWY1-3; PWY-6418; PWY-6312; PWY-6442; BENZCOA-PWY; PWY-561; PWY-5184; PWY-4801; KDO-NAGLIPASYN-PWY; PWY-6435;
metacyc_pathway_name ginsenoside degradation I;; sorgoleone biosynthesis;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; cannabinoid biosynthesis;; fatty acid β-oxidation II (peroxisome);; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; shisonin biosynthesis;; ; gallate degradation III (anaerobic);; phloridzin biosynthesis;; enterobacterial common antigen biosynthesis;; resveratrol biosynthesis;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; (Kdo)2-lipid A biosynthesis I;; ginsenoside degradation II;; raspberry ketone biosynthesis;; stearate biosynthesis I (animals and fungi);; superpathway of betalain biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; gentiodelphin biosynthesis;; amaranthin biosynthesis;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; superpathway of lipopolysaccharide biosynthesis;; actinorhodin biosynthesis;; curcuminoid biosynthesis;; mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; ginsenoside degradation III;; fatty acid β-oxidation I;; superpathway of mycolate biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; gallotannin biosynthesis;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; sophorolipid biosynthesis;; very long chain fatty acid biosynthesis I;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; anaerobic aromatic compound degradation (Thauera aromatica);; superpathway of glyoxylate cycle and fatty acid degradation;; toluene degradation VI (anaerobic);; aloesone biosynthesis I;; superpathway of (Kdo)2-lipid A biosynthesis;; 4-hydroxybenzoate biosynthesis III (plants);;
metacyc_pathway_type Ginsenoside-Degradation;; QUINONE-SYN;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Fatty-Acid-Degradation;; ANTHOCYANIN-SYN; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; ; GALLATE-DEG;; FLAVONOID-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; Lipid-Biosynthesis;; Ginsenoside-Degradation;; POLYKETIDE-SYN;; Stearate-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; BETALAIN-ALKALOIDS;; Fatty-acid-biosynthesis;; METHANOGENESIS;; Lipid-Biosynthesis; Super-Pathways;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOID-DEG;; Fatty-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; GALLOTANNINS;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; Lipid-Biosynthesis;; Fatty-acid-biosynthesis;; Cell-Wall-Biosynthesis;; Storage-Compounds-Biosynthesis;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; POLYKETIDE-SYN;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; 4-Hydroxybenzoate-Biosynthesis;;
pfam_acc PF02803; PF00108;
pfam_desc Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF02803.18 evalue:4.1e-44 score:148.4 best_domain_score:147.9 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:3.3e-53 score:179.9 best_domain_score:166.1 name:Thiolase_N;
sprot_desc Putative acyltransferase Rv0859;
sprot_id sp|O53871|Y0859_MYCTU;
sprot_target db:uniprot_sprot|sp|O53871|Y0859_MYCTU 3 403 evalue:1.9e-119 qcov:99.50 identity:57.00;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:1e-125 score:418.8 best_domain_score:418.6 name:TIGR01930;
64133 63501 CDS
ID metaerg.pl|10272
allec_ids 2.5.1.18;
allgo_ids GO:0005515; GO:0005737; GO:0004364; GO:0009072;
allko_ids K04097; K00799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109534508.1 1 210 evalue:1.1e-95 qcov:100.00 identity:77.40;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY-4061;
metacyc_pathway_name glutathione-mediated detoxification I;;
metacyc_pathway_type Detoxification; Other-Degradation;;
pfam_acc PF00043; PF13410; PF14497; PF02798; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_2; GST_C_3; GST_N; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:9e-12 score:44.3 best_domain_score:43.1 name:GST_C; db:Pfam-A.hmm|PF13410.6 evalue:4.8e-08 score:32.2 best_domain_score:31.0 name:GST_C_2; db:Pfam-A.hmm|PF14497.6 evalue:5.2e-06 score:25.8 best_domain_score:25.2 name:GST_C_3; db:Pfam-A.hmm|PF02798.20 evalue:4.7e-08 score:32.5 best_domain_score:31.5 name:GST_N; db:Pfam-A.hmm|PF13417.6 evalue:1.2e-05 score:24.8 best_domain_score:24.2 name:GST_N_3;
sprot_desc Glutathione S-transferase 1;
sprot_id sp|P28342|GSTZ1_DIACA;
sprot_target db:uniprot_sprot|sp|P28342|GSTZ1_DIACA 5 178 evalue:2.6e-11 qcov:82.90 identity:26.70;
65649 64495 CDS
ID metaerg.pl|10273
allec_ids 1.3.8.8;
allgo_ids GO:0016627; GO:0055114; GO:0005759; GO:0031966; GO:0005739; GO:0000062; GO:0050660; GO:0004466; GO:0016401; GO:0042413; GO:0019254; GO:0044242; GO:0006635; GO:0033539; GO:0042758; GO:0045717; GO:0046322; GO:0120162; GO:0051289; GO:0090181; GO:0001659;
allko_ids K09478; K00232; K00252; K00120; K06446; K00248; K11410; K00253; K14448; K00249; K08098; K11731; K11538; K00255;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07689.1 1 384 evalue:1.5e-204 qcov:100.00 identity:89.60;
kegg_pathway_id 01040; 00903; 00650; 00640; 00592; 00361; 00380; 00632; 00410; 00071; 01031; 00280; 00310; 00624; 00626; 00930;
kegg_pathway_name Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Butanoate metabolism; Propanoate metabolism; alpha-Linolenic acid metabolism; gamma-Hexachlorocyclohexane degradation; Tryptophan metabolism; Benzoate degradation via CoA ligation; beta-Alanine metabolism; Fatty acid metabolism; Glycan structures - biosynthesis 2; Valine, leucine and isoleucine degradation; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Naphthalene and anthracene degradation; Caprolactam degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:1.7e-44 score:150.9 best_domain_score:149.9 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:1.9e-13 score:50.1 best_domain_score:49.5 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:7.7e-26 score:89.4 best_domain_score:88.6 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:6.9e-32 score:109.7 best_domain_score:108.7 name:Acyl-CoA_dh_N;
sprot_desc Long-chain specific acyl-CoA dehydrogenase, mitochondrial;
sprot_id sp|P28330|ACADL_HUMAN;
sprot_target db:uniprot_sprot|sp|P28330|ACADL_HUMAN 14 384 evalue:3.6e-96 qcov:96.60 identity:48.00;
65913 65701 CDS
ID metaerg.pl|10274
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudooceanicola;s__Pseudooceanicola nitratireducens;
genomedb_acc GCF_900109195.1;
genomedb_target db:genomedb|GCF_900109195.1|WP_093453294.1 1 70 evalue:4.6e-27 qcov:100.00 identity:91.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
67744 65966 CDS
ID metaerg.pl|10275
allec_ids 1.3.8.-;
allgo_ids GO:0016627; GO:0055114; GO:0050660; GO:0052890;
allko_ids K00249; K06446; K00253; K00248; K14448; K20035;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07687.1 1 592 evalue:7.3e-299 qcov:100.00 identity:84.30;
kegg_pathway_id 00280; 00650; 00640; 00071; 00930; 00410;
kegg_pathway_name Valine, leucine and isoleucine degradation; Butanoate metabolism; Propanoate metabolism; Fatty acid metabolism; Caprolactam degradation; beta-Alanine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00441; PF12806; PF02770; PF02771; PF12418;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acetyl-CoA dehydrogenase C-terminal like; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; Acyl-CoA dehydrogenase N terminal;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_C; Acyl-CoA_dh_M; Acyl-CoA_dh_N; AcylCoA_DH_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:3.7e-19 score:68.6 best_domain_score:66.8 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF12806.7 evalue:1.2e-36 score:124.8 best_domain_score:124.8 name:Acyl-CoA_dh_C; db:Pfam-A.hmm|PF02770.19 evalue:7.7e-19 score:66.9 best_domain_score:65.7 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:1.1e-14 score:54.3 best_domain_score:53.0 name:Acyl-CoA_dh_N; db:Pfam-A.hmm|PF12418.8 evalue:1.2e-08 score:34.1 best_domain_score:33.2 name:AcylCoA_DH_N;
sprot_desc 3-methylmercaptopropionyl-CoA dehydrogenase;
sprot_id sp|Q5LLW7|DMDC_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LLW7|DMDC_RUEPO 3 585 evalue:1.4e-126 qcov:98.50 identity:41.60;
68237 67839 CDS
ID metaerg.pl|10276
allgo_ids GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07686.1 3 132 evalue:1.2e-55 qcov:98.50 identity:87.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00376; PF09278; PF13411;
pfam_desc MerR family regulatory protein; MerR, DNA binding; MerR HTH family regulatory protein;
pfam_id MerR; MerR-DNA-bind; MerR_1;
pfam_target db:Pfam-A.hmm|PF00376.23 evalue:4.3e-10 score:38.4 best_domain_score:37.6 name:MerR; db:Pfam-A.hmm|PF09278.11 evalue:4.8e-17 score:61.5 best_domain_score:60.6 name:MerR-DNA-bind; db:Pfam-A.hmm|PF13411.6 evalue:1.1e-13 score:50.2 best_domain_score:49.5 name:MerR_1;
68818 68435 CDS
ID metaerg.pl|10277
allgo_ids GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068306186.1 1 127 evalue:2.6e-44 qcov:100.00 identity:74.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00376; PF09278; PF13411;
pfam_desc MerR family regulatory protein; MerR, DNA binding; MerR HTH family regulatory protein;
pfam_id MerR; MerR-DNA-bind; MerR_1;
pfam_target db:Pfam-A.hmm|PF00376.23 evalue:4.5e-07 score:28.8 best_domain_score:26.8 name:MerR; db:Pfam-A.hmm|PF09278.11 evalue:2.9e-14 score:52.6 best_domain_score:51.9 name:MerR-DNA-bind; db:Pfam-A.hmm|PF13411.6 evalue:4.9e-14 score:51.4 best_domain_score:50.7 name:MerR_1;
69044 69673 CDS
ID metaerg.pl|10278
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp002282555;
genomedb_acc GCA_002282555.1;
genomedb_target db:genomedb|GCA_002282555.1|OZB20012.1 1 209 evalue:9.0e-18 qcov:100.00 identity:36.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
sp YES;
69044 69100 signal_peptide
ID metaerg.pl|10279
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
70676 69711 CDS
ID metaerg.pl|10280
allgo_ids GO:0071949;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07582.1 1 316 evalue:1.4e-131 qcov:98.40 identity:76.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF01494;
pfam_desc FAD binding domain;
pfam_id FAD_binding_3;
pfam_target db:Pfam-A.hmm|PF01494.19 evalue:3.4e-18 score:65.2 best_domain_score:64.9 name:FAD_binding_3;
70899 70830 tRNA
ID metaerg.pl|10281
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
name tRNA_Thr_ggt;
71258 70983 CDS
ID metaerg.pl|10282
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07581.1 24 91 evalue:9.4e-12 qcov:74.70 identity:63.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
tm_num 2;
71258 70983 transmembrane_helix
ID metaerg.pl|10283
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology i71118-71177o71187-71246i;
72032 71379 CDS
ID metaerg.pl|10284
allec_ids 3.1.3.5;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798374.1 2 217 evalue:1.7e-83 qcov:99.50 identity:71.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY-5044; PWY-5695; PWY-5381; URSIN-PWY; PWY-6353;
metacyc_pathway_name purine nucleotides degradation I (plants);; inosine 5'-phosphate degradation;; pyridine nucleotide cycling (plants);; ureide biosynthesis;; purine nucleotides degradation II (aerobic);;
metacyc_pathway_type Purine-Degradation; Super-Pathways;; Purine-Degradation;; NAD-Metabolism;; Polyamine-Biosynthesis; Super-Pathways;; Purine-Degradation; Super-Pathways;;
pfam_acc PF13419;
pfam_desc Haloacid dehalogenase-like hydrolase;
pfam_id HAD_2;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:8e-08 score:31.8 best_domain_score:29.3 name:HAD_2;
tigrfam_acc TIGR01509; TIGR01993;
tigrfam_desc HAD hydrolase, family IA, variant 3; pyrimidine 5'-nucleotidase;
tigrfam_mainrole Unknown function;
tigrfam_name HAD-SF-IA-v3; Pyr-5-nucltdase;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:7.6e-13 score:48.1 best_domain_score:42.2 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01993 evalue:1.3e-58 score:197.0 best_domain_score:196.8 name:TIGR01993;
72161 72820 CDS
ID metaerg.pl|10285
allgo_ids GO:0003700; GO:0006355; GO:0043565;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07579.1 1 217 evalue:2.3e-93 qcov:99.10 identity:86.60;
kegg_pathway_id 00300; 00310;
kegg_pathway_name Lysine biosynthesis; Lysine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:6.4e-24 score:84.0 best_domain_score:84.0 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:1e-18 score:65.9 best_domain_score:65.9 name:GntR;
sprot_desc Uncharacterized HTH-type transcriptional regulator YdhC;
sprot_id sp|O05494|YDHC_BACSU;
sprot_target db:uniprot_sprot|sp|O05494|YDHC_BACSU 12 199 evalue:4.3e-17 qcov:85.80 identity:32.30;
74660 72840 CDS
ID metaerg.pl|10286
allgo_ids GO:0016757;
allko_ids K00694;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07578.1 1 606 evalue:1.1e-233 qcov:100.00 identity:67.20;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00535; PF13641; PF13506; PF13632; PF05157;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family 21; Glycosyl transferase family group 2; Type II secretion system (T2SS), protein E, N-terminal domain;
pfam_id Glycos_transf_2; Glyco_tranf_2_3; Glyco_transf_21; Glyco_trans_2_3; T2SSE_N;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:3e-13 score:49.2 best_domain_score:48.5 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:4.9e-31 score:107.6 best_domain_score:107.0 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13506.6 evalue:7.2e-10 score:37.8 best_domain_score:37.1 name:Glyco_transf_21; db:Pfam-A.hmm|PF13632.6 evalue:2.3e-28 score:98.7 best_domain_score:98.7 name:Glyco_trans_2_3; db:Pfam-A.hmm|PF05157.15 evalue:9.4e-11 score:41.2 best_domain_score:39.7 name:T2SSE_N;
tm_num 5;
74660 72840 transmembrane_helix
ID metaerg.pl|10287
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology i73314-73373o73383-73451i74301-74369o74412-74480i74517-74585o;
76423 75245 CDS
ID metaerg.pl|10288
allec_ids 6.3.5.5;
allgo_ids GO:0016787; GO:0005524; GO:0004088; GO:0006207; GO:0044205; GO:0006526; GO:0006541;
allko_ids K01956; K01663; K01656; K00609; K01657; K11540; K03342; K02619; K01664; K01665; K01954; K01951; K01658; K13501; K01955; K13497; K13950; K11541;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07577.1 4 387 evalue:1.1e-199 qcov:98.00 identity:86.50;
kegg_pathway_id 00983; 00400; 00230; 00240; 02020; 00251; 00252; 00620; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Phenylalanine, tyrosine and tryptophan biosynthesis; Purine metabolism; Pyrimidine metabolism; Two-component system - General; Glutamate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id ARGSYN-PWY; PRPP-PWY; PWY-5154; PWY-5686; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; PWY0-162;
metacyc_pathway_name L-arginine biosynthesis I (via L-ornithine);; superpathway of histidine, purine, and pyrimidine biosynthesis;; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; UMP biosynthesis I;; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;;
metacyc_pathway_type ARGININE-SYN; Super-Pathways;; Super-Pathways;; ARGININE-SYN;; UMP-Biosynthesis;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF00988; PF00117; PF07722;
pfam_desc Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; Peptidase C26;
pfam_id CPSase_sm_chain; GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00988.22 evalue:2e-47 score:159.5 best_domain_score:158.9 name:CPSase_sm_chain; db:Pfam-A.hmm|PF00117.28 evalue:4e-44 score:149.9 best_domain_score:149.5 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:2e-08 score:33.5 best_domain_score:28.5 name:Peptidase_C26;
sprot_desc Carbamoyl-phosphate synthase small chain;
sprot_id sp|Q5LTN6|CARA_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LTN6|CARA_RUEPO 10 390 evalue:3.2e-188 qcov:97.20 identity:81.90;
tigrfam_acc TIGR01368;
tigrfam_desc carbamoyl-phosphate synthase, small subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name CPSaseIIsmall;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01368 evalue:1.9e-131 score:437.5 best_domain_score:437.3 name:TIGR01368;
77649 76615 CDS
ID metaerg.pl|10289
allec_ids 1.3.1.104;
allgo_ids GO:0055114; GO:0005739; GO:0019166; GO:0006633; GO:0006631; GO:0039020;
allko_ids K07512;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH30625.1 1 344 evalue:1.6e-128 qcov:100.00 identity:69.20;
kegg_pathway_id 00062;
kegg_pathway_name Fatty acid elongation in mitochondria;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00107;
pfam_desc Zinc-binding dehydrogenase;
pfam_id ADH_zinc_N;
pfam_target db:Pfam-A.hmm|PF00107.26 evalue:1.1e-08 score:34.4 best_domain_score:32.5 name:ADH_zinc_N;
sprot_desc Enoyl-[acyl-carrier-protein] reductase, mitochondrial;
sprot_id sp|Q28GQ2|MECR_XENTR;
sprot_target db:uniprot_sprot|sp|Q28GQ2|MECR_XENTR 47 304 evalue:5.3e-22 qcov:75.00 identity:29.40;
77858 78358 CDS
ID metaerg.pl|10290
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE44897.1 1 145 evalue:5.6e-55 qcov:87.30 identity:77.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF03061;
pfam_desc Thioesterase superfamily;
pfam_id 4HBT;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:4.4e-17 score:61.4 best_domain_score:60.6 name:4HBT;
tigrfam_acc TIGR00369;
tigrfam_desc uncharacterized domain 1;
tigrfam_name unchar_dom_1;
tigrfam_target db:TIGRFAMs.hmm|TIGR00369 evalue:1.2e-16 score:60.0 best_domain_score:59.3 name:TIGR00369;
78355 78870 CDS
ID metaerg.pl|10291
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07683.1 1 171 evalue:1.5e-82 qcov:100.00 identity:87.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF03061;
pfam_desc Thioesterase superfamily;
pfam_id 4HBT;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:6.2e-09 score:35.3 best_domain_score:33.5 name:4HBT;
78867 80189 CDS
ID metaerg.pl|10292
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0042910;
allko_ids K03327;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07682.1 16 440 evalue:2.4e-169 qcov:96.60 identity:76.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF01554;
pfam_desc MatE;
pfam_id MatE;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:1.7e-33 score:114.8 best_domain_score:67.2 name:MatE;
sprot_desc DNA damage-inducible protein F;
sprot_id sp|P28303|DINF_ECOLI;
sprot_target db:uniprot_sprot|sp|P28303|DINF_ECOLI 7 435 evalue:1.4e-64 qcov:97.50 identity:38.80;
tigrfam_acc TIGR00797;
tigrfam_desc MATE efflux family protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name matE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00797 evalue:8.8e-69 score:231.4 best_domain_score:231.2 name:TIGR00797;
tm_num 11;
78867 80189 transmembrane_helix
ID metaerg.pl|10293
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology i78927-78995o79023-79091i79170-79238o79296-79355i79374-79442o79470-79538i79599-79667o79695-79754i79812-79880o79923-79991i80052-80120o;
80202 80828 CDS
ID metaerg.pl|10294
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ruegeria;s__Ruegeria sp000158135;
genomedb_acc GCF_000158135.1;
genomedb_target db:genomedb|GCF_000158135.1|WP_008757139.1 4 206 evalue:1.1e-79 qcov:97.60 identity:74.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
80828 81301 CDS
ID metaerg.pl|10295
allec_ids 3.1.2.-;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pseudoroseicyclus;s__Pseudoroseicyclus aestuarii;
genomedb_acc GCF_003217255.1;
genomedb_target db:genomedb|GCF_003217255.1|WP_110814424.1 24 145 evalue:2.0e-38 qcov:77.70 identity:72.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
metacyc_pathway_id PWY-5840; PWY-5837; PWY-6320; PWY-5896; PWY-5862; PWY-5845; PWY-5860; PWY-5898; PWY-5863; PWY0-1337; ALL-CHORISMATE-PWY; PWY-5897; PWY-5996; PWY-6453; PWY-981; PWY-5791; PWY-5861; PWY-5838; PWY-5850; PWY-5899;
metacyc_pathway_name superpathway of menaquinol-7 biosynthesis;; 2-carboxy-1,4-naphthoquinol biosynthesis;; phaselate biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-6 biosynthesis I;; superpathway of menaquinol-12 biosynthesis;; superpathway of phylloquinol biosynthesis;; oleate β-oxidation;; superpathway of chorismate metabolism;; superpathway of menaquinol-11 biosynthesis;; oleate biosynthesis II (animals and fungi);; stigma estolide biosynthesis;; salicylate biosynthesis II;; ; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-8 biosynthesis I;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; DHNA-Biosynthesis;; AROMATIC-COMPOUNDS-BIOSYN;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Fatty-Acid-Degradation;; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Oleate-Biosynthesis;; Lipid-Biosynthesis;; Salicylate-Biosynthesis;; ; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF03061; PF13279;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily;
pfam_id 4HBT; 4HBT_2;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:5.6e-15 score:54.7 best_domain_score:54.2 name:4HBT; db:Pfam-A.hmm|PF13279.6 evalue:1.6e-13 score:50.5 best_domain_score:50.2 name:4HBT_2;
tigrfam_acc TIGR00051; TIGR02799;
tigrfam_desc acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00051; thio_ybgC;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00051 evalue:4.9e-28 score:97.0 best_domain_score:96.8 name:TIGR00051; db:TIGRFAMs.hmm|TIGR02799 evalue:3.2e-48 score:162.3 best_domain_score:162.1 name:TIGR02799;
81784 81338 CDS
ID metaerg.pl|10296
allec_ids 1.8.1.8;
allgo_ids GO:0045454; GO:0005737; GO:0046872; GO:0015035; GO:0047134; GO:0006662;
allko_ids K03672;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07950.1 6 148 evalue:1.1e-65 qcov:96.60 identity:83.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00085; PF13098; PF13899;
pfam_desc Thioredoxin; Thioredoxin-like domain; Thioredoxin-like;
pfam_id Thioredoxin; Thioredoxin_2; Thioredoxin_7;
pfam_target db:Pfam-A.hmm|PF00085.20 evalue:5.3e-27 score:93.0 best_domain_score:91.7 name:Thioredoxin; db:Pfam-A.hmm|PF13098.6 evalue:7.5e-09 score:35.2 best_domain_score:30.4 name:Thioredoxin_2; db:Pfam-A.hmm|PF13899.6 evalue:1.4e-07 score:30.8 best_domain_score:28.7 name:Thioredoxin_7;
sprot_desc Thioredoxin 2;
sprot_id sp|P0AGG6|THIO2_ECO57;
sprot_target db:uniprot_sprot|sp|P0AGG6|THIO2_ECO57 10 145 evalue:1.4e-27 qcov:91.90 identity:45.60;
tigrfam_acc TIGR01068;
tigrfam_desc thioredoxin;
tigrfam_mainrole Energy metabolism;
tigrfam_name thioredoxin;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01068 evalue:2.4e-28 score:97.4 best_domain_score:97.1 name:TIGR01068;
82474 81851 CDS
ID metaerg.pl|10297
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07951.1 1 206 evalue:8.5e-85 qcov:99.50 identity:84.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF03458;
pfam_desc UPF0126 domain;
pfam_id UPF0126;
pfam_target db:Pfam-A.hmm|PF03458.13 evalue:6.2e-33 score:111.8 best_domain_score:67.8 name:UPF0126;
sprot_desc hypothetical protein;
sprot_id sp|P45122|Y1240_HAEIN;
sprot_target db:uniprot_sprot|sp|P45122|Y1240_HAEIN 3 200 evalue:3.8e-23 qcov:95.70 identity:38.10;
tm_num 5;
82474 81851 transmembrane_helix
ID metaerg.pl|10298
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology o81860-81919i81938-82006o82016-82084i82142-82210o82313-82381i;
82944 82471 CDS
ID metaerg.pl|10299
allec_ids 3.1.26.4;
allgo_ids GO:0003676; GO:0004523; GO:0005737; GO:0000287; GO:0006401;
allko_ids K03469;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Ponticoccus;s__Ponticoccus marisrubri;
genomedb_acc GCF_001482405.1;
genomedb_target db:genomedb|GCF_001482405.1|WP_058861701.1 1 152 evalue:3.4e-70 qcov:96.80 identity:82.20;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF00075;
pfam_desc RNase H;
pfam_id RNase_H;
pfam_target db:Pfam-A.hmm|PF00075.24 evalue:6.1e-49 score:165.1 best_domain_score:164.8 name:RNase_H;
sprot_desc Ribonuclease H;
sprot_id sp|A1B840|RNH_PARDP;
sprot_target db:uniprot_sprot|sp|A1B840|RNH_PARDP 1 152 evalue:7.0e-70 qcov:96.80 identity:80.90;
83623 82937 CDS
ID metaerg.pl|10300
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
pfam_acc PF11911;
pfam_desc Protein of unknown function (DUF3429);
pfam_id DUF3429;
pfam_target db:Pfam-A.hmm|PF11911.8 evalue:9.9e-26 score:90.0 best_domain_score:89.7 name:DUF3429;
tm_num 5;
83623 82937 transmembrane_helix
ID metaerg.pl|10301
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49881; 27.0502; 0.884203; 22.6549; 0.0122433;
topology i83222-83290o83303-83371i83390-83458o83468-83536i83555-83614o;
>Feature NODE_75_length_83493_cov_35.1433
3 212 CDS
ID metaerg.pl|10302
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726438.1 1 66 evalue:2.3e-18 qcov:95.70 identity:69.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
187 1470 CDS
ID metaerg.pl|10303
allec_ids 2.7.7.72; 3.1.3.-; 3.1.4.-;
allgo_ids GO:0003723; GO:0006396; GO:0016779; GO:0005524; GO:0052929; GO:0052928; GO:0052927; GO:0004112; GO:0000287; GO:0016791; GO:0000049; GO:0016437; GO:0042245; GO:0001680;
allko_ids K00974; K00970;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727097.1 19 422 evalue:1.0e-177 qcov:94.60 identity:74.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
metacyc_pathway_id PWY-5083; PWY-882; NADPHOS-DEPHOS-PWY; PWY-5491; PWY-6456;
metacyc_pathway_name NAD/NADH phosphorylation and dephosphorylation;; L-ascorbate biosynthesis I (L-galactose pathway);; NAD phosphorylation and dephosphorylation;; diethylphosphate degradation;; serinol biosynthesis;;
metacyc_pathway_type NAD-Metabolism;; Ascorbate-Biosynthesis;; NAD-Metabolism;; Phosphorus-Compounds;; Polyamine-Biosynthesis;;
pfam_acc PF01966; PF01743; PF12627;
pfam_desc HD domain; Poly A polymerase head domain; Probable RNA and SrmB- binding site of polymerase A;
pfam_id HD; PolyA_pol; PolyA_pol_RNAbd;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:1.3e-08 score:34.3 best_domain_score:33.4 name:HD; db:Pfam-A.hmm|PF01743.20 evalue:7.5e-18 score:64.4 best_domain_score:61.6 name:PolyA_pol; db:Pfam-A.hmm|PF12627.7 evalue:9.6e-14 score:50.1 best_domain_score:48.8 name:PolyA_pol_RNAbd;
sprot_desc Multifunctional CCA protein;
sprot_id sp|Q0ACP8|CCA_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0ACP8|CCA_ALKEH 22 426 evalue:9.5e-146 qcov:94.80 identity:63.10;
3531 1480 CDS
ID metaerg.pl|10304
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726437.1 1 683 evalue:6.6e-235 qcov:100.00 identity:61.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00563; PF00990;
pfam_desc EAL domain; Diguanylate cyclase, GGDEF domain;
pfam_id EAL; GGDEF;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:1.1e-73 score:246.9 best_domain_score:246.4 name:EAL; db:Pfam-A.hmm|PF00990.21 evalue:1.8e-30 score:105.0 best_domain_score:104.3 name:GGDEF;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:1e-19 score:70.0 best_domain_score:69.4 name:TIGR00254;
tm_num 7;
3531 1480 transmembrane_helix
ID metaerg.pl|10305
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology o1507-1575i1594-1662o1690-1758i1792-1860o1888-1956i1993-2061o2089-2157i;
3772 6837 CDS
ID metaerg.pl|10306
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886;
allko_ids K07788;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169736.1 1 1021 evalue:0.0e+00 qcov:100.00 identity:82.60;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00873; PF03176;
pfam_desc AcrB/AcrD/AcrF family; MMPL family;
pfam_id ACR_tran; MMPL;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:6.4e-182 score:606.0 best_domain_score:604.1 name:ACR_tran; db:Pfam-A.hmm|PF03176.15 evalue:3.7e-11 score:41.8 best_domain_score:38.9 name:MMPL;
sprot_desc Multidrug resistance protein MdtB;
sprot_id sp|B5YUD3|MDTB_ECO5E;
sprot_target db:uniprot_sprot|sp|B5YUD3|MDTB_ECO5E 4 1001 evalue:2.5e-83 qcov:97.70 identity:25.80;
tm_num 12;
3772 6837 transmembrane_helix
ID metaerg.pl|10307
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i3790-3858o4768-4836i4855-4914o4942-5010i5068-5136o5164-5232i5338-5406o6313-6372i6391-6459o6487-6555i6613-6681o6709-6777i;
6849 7886 CDS
ID metaerg.pl|10308
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169735.1 20 344 evalue:1.0e-135 qcov:94.20 identity:80.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF13533; PF13437; PF16576;
pfam_desc Biotin-lipoyl like; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF13533.6 evalue:3.5e-07 score:29.2 best_domain_score:20.2 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:1.8e-11 score:43.9 best_domain_score:33.5 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:4.6e-10 score:38.3 best_domain_score:36.5 name:HlyD_D23;
sp YES;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:1.1e-58 score:197.9 best_domain_score:197.7 name:TIGR01730;
tm_num 1;
6849 6911 signal_peptide
ID metaerg.pl|10309
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
6849 7886 transmembrane_helix
ID metaerg.pl|10310
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i6861-6929o;
7939 8670 CDS
ID metaerg.pl|10311
allgo_ids GO:0004298; GO:0005839; GO:0051603;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726434.1 1 243 evalue:3.6e-95 qcov:100.00 identity:70.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00227;
pfam_desc Proteasome subunit;
pfam_id Proteasome;
pfam_target db:Pfam-A.hmm|PF00227.26 evalue:2.5e-05 score:23.1 best_domain_score:22.6 name:Proteasome;
9758 8709 CDS
ID metaerg.pl|10312
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37192.1 1 348 evalue:3.0e-151 qcov:99.70 identity:71.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF15887; PF10005;
pfam_desc Putative zinc-binding metallo-peptidase; zinc-ribbon domain;
pfam_id Peptidase_Mx; zinc-ribbon_6;
pfam_target db:Pfam-A.hmm|PF15887.5 evalue:1.3e-98 score:328.3 best_domain_score:328.1 name:Peptidase_Mx; db:Pfam-A.hmm|PF10005.9 evalue:5.1e-31 score:106.4 best_domain_score:105.7 name:zinc-ribbon_6;
sprot_desc hypothetical protein;
sprot_id sp|P9WL94|Y2568_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WL94|Y2568_MYCTO 1 342 evalue:9.7e-64 qcov:98.00 identity:39.30;
10715 9783 CDS
ID metaerg.pl|10313
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726432.1 1 307 evalue:4.1e-136 qcov:99.00 identity:80.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF04168;
pfam_desc A predicted alpha-helical domain with a conserved ER motif.;
pfam_id Alpha-E;
pfam_target db:Pfam-A.hmm|PF04168.12 evalue:9e-82 score:274.4 best_domain_score:274.2 name:Alpha-E;
sprot_desc hypothetical protein;
sprot_id sp|P9WL96|Y2567_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WL96|Y2567_MYCTO 4 295 evalue:1.8e-08 qcov:94.20 identity:25.10;
12160 10715 CDS
ID metaerg.pl|10314
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726431.1 1 478 evalue:9.0e-247 qcov:99.40 identity:86.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF04174; PF14403;
pfam_desc A circularly permuted ATPgrasp ; Circularly permuted ATP-grasp type 2;
pfam_id CP_ATPgrasp_1; CP_ATPgrasp_2;
pfam_target db:Pfam-A.hmm|PF04174.13 evalue:3.4e-145 score:482.5 best_domain_score:481.9 name:CP_ATPgrasp_1; db:Pfam-A.hmm|PF14403.6 evalue:7.7e-164 score:544.3 best_domain_score:543.9 name:CP_ATPgrasp_2;
sprot_desc hypothetical protein;
sprot_id sp|Q55587|Y335_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55587|Y335_SYNY3 1 476 evalue:9.6e-163 qcov:99.00 identity:57.70;
12692 12285 CDS
ID metaerg.pl|10315
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
13322 12696 CDS
ID metaerg.pl|10316
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
13636 13412 CDS
ID metaerg.pl|10317
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia tuberum;
genomedb_acc GCF_900101795.1;
genomedb_target db:genomedb|GCF_900101795.1|WP_090804297.1 7 72 evalue:2.1e-14 qcov:89.20 identity:56.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
14840 13629 CDS
ID metaerg.pl|10318
allgo_ids GO:0005525;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales_A;f__Thalassospiraceae;g__Thalassospira;s__Thalassospira lohafexi;
genomedb_acc GCF_002844235.1;
genomedb_target db:genomedb|GCF_002844235.1|WP_101247933.1 5 397 evalue:1.2e-159 qcov:97.50 identity:69.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF02492; PF07683;
pfam_desc CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain;
pfam_id cobW; CobW_C;
pfam_target db:Pfam-A.hmm|PF02492.19 evalue:5.9e-58 score:194.6 best_domain_score:194.2 name:cobW; db:Pfam-A.hmm|PF07683.14 evalue:4.4e-28 score:96.3 best_domain_score:95.2 name:CobW_C;
sprot_desc Putative metal chaperone YciC;
sprot_id sp|P94400|YCIC_BACSU;
sprot_target db:uniprot_sprot|sp|P94400|YCIC_BACSU 5 399 evalue:3.6e-102 qcov:98.00 identity:50.90;
15708 14932 CDS
ID metaerg.pl|10319
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015620; GO:0015685;
allko_ids K02013; K05816; K02049; K01995; K01998; K02023; K09817; K02010; K02006; K02052; K02045; K01996; K06861; K02071; K23188;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726430.1 3 258 evalue:3.4e-91 qcov:99.20 identity:67.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:9.5e-14 score:51.1 best_domain_score:29.2 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.2e-29 score:102.8 best_domain_score:102.4 name:ABC_tran;
sprot_desc Ferric enterobactin transport ATP-binding protein FepC;
sprot_id sp|P23878|FEPC_ECOLI;
sprot_target db:uniprot_sprot|sp|P23878|FEPC_ECOLI 6 248 evalue:1.3e-33 qcov:94.20 identity:32.10;
16739 15708 CDS
ID metaerg.pl|10320
allgo_ids GO:0005215; GO:0016020; GO:0016021; GO:0005886; GO:0090482; GO:0015889;
allko_ids K06073;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726429.1 23 343 evalue:5.4e-129 qcov:93.60 identity:78.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF01032;
pfam_desc FecCD transport family;
pfam_id FecCD;
pfam_target db:Pfam-A.hmm|PF01032.18 evalue:4e-83 score:278.2 best_domain_score:277.9 name:FecCD;
sprot_desc Vitamin B12 import system permease protein BtuC;
sprot_id sp|Q6LQ76|BTUC_PHOPR;
sprot_target db:uniprot_sprot|sp|Q6LQ76|BTUC_PHOPR 25 339 evalue:6.0e-50 qcov:91.80 identity:41.90;
tm_num 8;
16739 15708 transmembrane_helix
ID metaerg.pl|10321
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i15792-15860o15936-16004i16023-16091o16104-16157i16191-16259o16302-16370i16461-16529o16659-16727i;
16763 17263 CDS
ID metaerg.pl|10322
allec_ids 3.6.1.-;
allgo_ids GO:0016787; GO:0016818;
allko_ids K01529; K03574; K08311; K01515; K08310;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169917.1 1 158 evalue:4.9e-75 qcov:95.20 identity:83.50;
kegg_pathway_id 00790; 00230;
kegg_pathway_name Folate biosynthesis; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
metacyc_pathway_id PWY-6383; FOLSYN-PWY; ALL-CHORISMATE-PWY; PWY-6502; PWY-6147; PWY-5354; PWY-6404;
metacyc_pathway_name mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;; oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; ; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;; Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;; ; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:7.5e-24 score:83.5 best_domain_score:83.2 name:NUDIX;
sprot_desc RNA pyrophosphohydrolase;
sprot_id sp|Q8PQ40|RPPH_XANAC;
sprot_target db:uniprot_sprot|sp|Q8PQ40|RPPH_XANAC 1 156 evalue:3.5e-64 qcov:94.00 identity:69.90;
17319 18746 CDS
ID metaerg.pl|10323
allec_ids 3.4.17.-;
allgo_ids GO:0016787; GO:0005737; GO:0005783; GO:0005615; GO:0005794; GO:0005764; GO:0004180; GO:0046872; GO:0070573; GO:0042803; GO:0043171; GO:0006508; GO:0006590; GO:0042246;
allko_ids K01302;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726428.1 3 465 evalue:6.9e-191 qcov:97.50 identity:73.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF01546; PF04389;
pfam_desc Peptidase family M20/M25/M40; Peptidase family M28;
pfam_id Peptidase_M20; Peptidase_M28;
pfam_target db:Pfam-A.hmm|PF01546.28 evalue:5.2e-06 score:25.5 best_domain_score:24.7 name:Peptidase_M20; db:Pfam-A.hmm|PF04389.17 evalue:2.2e-24 score:85.5 best_domain_score:85.0 name:Peptidase_M28;
sp YES;
sprot_desc Carboxypeptidase Q;
sprot_id sp|Q17QK3|CBPQ_BOVIN;
sprot_target db:uniprot_sprot|sp|Q17QK3|CBPQ_BOVIN 50 451 evalue:1.7e-55 qcov:84.60 identity:32.30;
17319 17372 signal_peptide
ID metaerg.pl|10324
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
20521 18761 CDS
ID metaerg.pl|10325
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169734.1 5 579 evalue:1.1e-94 qcov:98.10 identity:38.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00990; PF17874;
pfam_desc Diguanylate cyclase, GGDEF domain; MalT-like TPR region;
pfam_id GGDEF; TPR_MalT;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:3.3e-36 score:123.7 best_domain_score:122.3 name:GGDEF; db:Pfam-A.hmm|PF17874.1 evalue:1.9e-10 score:39.9 best_domain_score:29.2 name:TPR_MalT;
sp YES;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:1.3e-37 score:128.2 best_domain_score:126.8 name:TIGR00254;
tm_num 2;
18761 18832 signal_peptide
ID metaerg.pl|10326
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
20521 18761 transmembrane_helix
ID metaerg.pl|10327
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i18773-18832o19922-19975i;
22373 20595 CDS
ID metaerg.pl|10328
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Ahniellaceae;g__UDEA-SF1;s__UDEA-SF1 sp002995625;
genomedb_acc GCA_002995625.1;
genomedb_target db:genomedb|GCA_002995625.1|PVBP01000075.1_7 27 592 evalue:4.0e-71 qcov:95.60 identity:35.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00990;
pfam_desc Diguanylate cyclase, GGDEF domain;
pfam_id GGDEF;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:1.6e-41 score:141.0 best_domain_score:139.0 name:GGDEF;
sp YES;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:1.5e-40 score:137.8 best_domain_score:136.5 name:TIGR00254;
tm_num 1;
20595 20711 signal_peptide
ID metaerg.pl|10329
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
22373 20595 transmembrane_helix
ID metaerg.pl|10330
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology o21789-21857i;
24156 22324 CDS
ID metaerg.pl|10331
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169734.1 26 606 evalue:1.3e-85 qcov:95.20 identity:35.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00990;
pfam_desc Diguanylate cyclase, GGDEF domain;
pfam_id GGDEF;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:8.2e-42 score:141.9 best_domain_score:140.6 name:GGDEF;
sp YES;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:2.1e-42 score:143.8 best_domain_score:143.0 name:TIGR00254;
tm_num 1;
22324 22473 signal_peptide
ID metaerg.pl|10332
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
24156 22324 transmembrane_helix
ID metaerg.pl|10333
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology o23569-23622i;
24264 24656 CDS
ID metaerg.pl|10334
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Pseudoxanthomonas_A;s__Pseudoxanthomonas_A wuyuanensis;
genomedb_acc GCF_900215535.1;
genomedb_target db:genomedb|GCF_900215535.1|WP_097120171.1 6 125 evalue:1.2e-23 qcov:92.30 identity:52.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
tm_num 1;
24264 24656 transmembrane_helix
ID metaerg.pl|10335
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i24570-24629o;
26510 24726 CDS
ID metaerg.pl|10336
allgo_ids GO:0009279; GO:0046930; GO:0015420; GO:0046872; GO:0015288;
allko_ids K16092;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169732.1 6 592 evalue:8.7e-183 qcov:98.80 identity:57.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF07715; PF00593;
pfam_desc TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:1.1e-27 score:96.0 best_domain_score:95.6 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:5e-40 score:138.0 best_domain_score:137.3 name:TonB_dep_Rec;
sp YES;
sprot_desc Vitamin B12 transporter BtuB;
sprot_id sp|Q1CBU1|BTUB_YERPA;
sprot_target db:uniprot_sprot|sp|Q1CBU1|BTUB_YERPA 33 592 evalue:7.9e-58 qcov:94.30 identity:30.40;
24726 24788 signal_peptide
ID metaerg.pl|10337
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
29512 27023 CDS
ID metaerg.pl|10338
allec_ids 1.3.8.7;
allgo_ids GO:0016627; GO:0055114; GO:0003995; GO:0050660; GO:0033539;
allko_ids K14448; K00252; K00253; K00248; K06446; K06445; K00249;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726420.1 1 829 evalue:0.0e+00 qcov:100.00 identity:83.80;
kegg_pathway_id 00380; 00930; 00632; 00280; 00310; 00650; 00640; 00410; 00071;
kegg_pathway_name Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation; Valine, leucine and isoleucine degradation; Lysine degradation; Butanoate metabolism; Propanoate metabolism; beta-Alanine metabolism; Fatty acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00441; PF08028; PF02771; PF09317;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain; Domain of unknown function (DUF1974);
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_N; DUF1974;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:2.5e-22 score:78.9 best_domain_score:77.9 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:1.8e-05 score:24.3 best_domain_score:23.2 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02771.16 evalue:2.3e-20 score:72.6 best_domain_score:71.1 name:Acyl-CoA_dh_N; db:Pfam-A.hmm|PF09317.11 evalue:2.1e-105 score:351.6 best_domain_score:351.2 name:DUF1974;
sp YES;
sprot_desc Acyl-coenzyme A dehydrogenase;
sprot_id sp|Q8X7R2|FADE_ECO57;
sprot_target db:uniprot_sprot|sp|Q8X7R2|FADE_ECO57 1 819 evalue:6.4e-231 qcov:98.80 identity:50.80;
tm_num 2;
27023 27070 lipoprotein_signal_peptide
ID metaerg.pl|10339
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
29512 27023 transmembrane_helix
ID metaerg.pl|10340
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology o27035-27103i27122-27190o;
30417 29509 CDS
ID metaerg.pl|10341
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169731.1 9 302 evalue:4.3e-146 qcov:97.40 identity:86.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00561; PF12697; PF12146; PF02129;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33; X-Pro dipeptidyl-peptidase (S15 family);
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4; Peptidase_S15;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:1.8e-20 score:72.9 best_domain_score:71.7 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:1.4e-18 score:67.5 best_domain_score:67.2 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:6.4e-24 score:83.8 best_domain_score:83.3 name:Hydrolase_4; db:Pfam-A.hmm|PF02129.18 evalue:1.4e-05 score:24.0 best_domain_score:20.6 name:Peptidase_S15;
30522 31127 CDS
ID metaerg.pl|10342
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726419.1 1 196 evalue:2.2e-77 qcov:97.50 identity:74.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00440;
pfam_desc Bacterial regulatory proteins, tetR family;
pfam_id TetR_N;
pfam_target db:Pfam-A.hmm|PF00440.23 evalue:1.7e-14 score:52.5 best_domain_score:51.6 name:TetR_N;
32350 31259 CDS
ID metaerg.pl|10343
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0007049; GO:0051301;
allko_ids K06916;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726418.1 7 362 evalue:1.5e-124 qcov:98.10 identity:62.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00004; PF03969;
pfam_desc ATPase family associated with various cellular activities (AAA); AFG1-like ATPase;
pfam_id AAA; AFG1_ATPase;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:5.8e-05 score:22.8 best_domain_score:21.8 name:AAA; db:Pfam-A.hmm|PF03969.16 evalue:1.8e-121 score:404.7 best_domain_score:404.3 name:AFG1_ATPase;
sprot_desc Cell division protein ZapE;
sprot_id sp|P64613|ZAPE_ECO57;
sprot_target db:uniprot_sprot|sp|P64613|ZAPE_ECO57 8 363 evalue:1.9e-78 qcov:98.10 identity:44.70;
33022 32366 CDS
ID metaerg.pl|10344
allgo_ids GO:0016787;
allko_ids K07018;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37936.1 2 218 evalue:3.3e-95 qcov:99.50 identity:74.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00561; PF12697; PF12146; PF02129; PF00326;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33; X-Pro dipeptidyl-peptidase (S15 family); Prolyl oligopeptidase family;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4; Peptidase_S15; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:1.3e-11 score:43.9 best_domain_score:30.0 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:1.9e-08 score:34.4 best_domain_score:23.0 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:6.3e-11 score:41.2 best_domain_score:31.4 name:Hydrolase_4; db:Pfam-A.hmm|PF02129.18 evalue:3.6e-10 score:39.1 best_domain_score:31.7 name:Peptidase_S15; db:Pfam-A.hmm|PF00326.21 evalue:3e-07 score:29.4 best_domain_score:17.2 name:Peptidase_S9;
sprot_desc hypothetical protein;
sprot_id sp|Q9ZD73|Y471_RICPR;
sprot_target db:uniprot_sprot|sp|Q9ZD73|Y471_RICPR 13 216 evalue:1.1e-28 qcov:93.60 identity:34.60;
33103 33711 CDS
ID metaerg.pl|10345
allgo_ids GO:0006633; GO:0008770;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169730.1 1 191 evalue:4.9e-61 qcov:94.60 identity:59.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF04336;
pfam_desc Acyl carrier protein phosphodiesterase;
pfam_id ACP_PD;
pfam_target db:Pfam-A.hmm|PF04336.12 evalue:6.4e-16 score:57.9 best_domain_score:57.5 name:ACP_PD;
34190 33687 CDS
ID metaerg.pl|10346
allgo_ids GO:0009055; GO:0020037;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726415.1 1 167 evalue:2.9e-51 qcov:100.00 identity:65.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF13442;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III;
pfam_id Cytochrome_CBB3;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:3.1e-14 score:52.3 best_domain_score:51.4 name:Cytochrome_CBB3;
tm_num 1;
34190 33687 transmembrane_helix
ID metaerg.pl|10347
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i33723-33791o;
34691 34287 CDS
ID metaerg.pl|10348
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
tm_num 3;
34691 34287 transmembrane_helix
ID metaerg.pl|10349
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i34299-34367o34437-34505i34524-34592o;
34873 37122 CDS
ID metaerg.pl|10350
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726413.1 12 737 evalue:1.1e-248 qcov:96.90 identity:60.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00563; PF00990;
pfam_desc EAL domain; Diguanylate cyclase, GGDEF domain;
pfam_id EAL; GGDEF;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:1.1e-72 score:243.7 best_domain_score:242.3 name:EAL; db:Pfam-A.hmm|PF00990.21 evalue:1.7e-43 score:147.4 best_domain_score:146.6 name:GGDEF;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:5e-38 score:129.6 best_domain_score:128.7 name:TIGR00254;
tm_num 2;
34873 37122 transmembrane_helix
ID metaerg.pl|10351
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology o34900-34968i35659-35727o;
38486 37263 CDS
ID metaerg.pl|10352
allgo_ids GO:0000160;
allko_ids K07710; K02668; K08479; K02482; K07653; K07636; K06379; K07676; K04757; K07641; K07646; K07654; K03407; K07642; K08282;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__BRH-c0;s__BRH-c0 sp000961645;
genomedb_acc GCA_000961645.1;
genomedb_target db:genomedb|GCA_000961645.1|KJS04055.1 1 403 evalue:1.6e-124 qcov:99.00 identity:57.90;
kegg_pathway_id 02020; 03090;
kegg_pathway_name Two-component system - General; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00563; PF00072;
pfam_desc EAL domain; Response regulator receiver domain;
pfam_id EAL; Response_reg;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:4.8e-65 score:218.6 best_domain_score:216.8 name:EAL; db:Pfam-A.hmm|PF00072.24 evalue:1.4e-13 score:50.2 best_domain_score:49.0 name:Response_reg;
41106 38479 CDS
ID metaerg.pl|10353
allgo_ids GO:0000155; GO:0007165;
allko_ids K10681; K07676; K06379; K01769; K07644; K13532; K07709; K04757; K11617; K11357; K02342; K11629; K10125; K02486; K11383; K12767; K11520; K07769; K14509; K07717; K07675; K07647; K07680; K13040; K10942; K08479; K07674; K10916; K02668; K03388; K07710; K07640; K01768; K07656; K07697; K02489; K07716; K07653; K07638; K07636; K14489; K02482; K08801; K02480; K07678; K10715; K13587; K11527; K02030; K07642; K11711; K11356; K11640; K04486; K02484; K10909; K07704; K08282; K01937; K07677; K07708; K07645; K02491; K01090; K07643; K11231; K03407; K07637; K07654; K07777; K00936; K07682; K07649; K07652; K07646; K13598; K07641; K01120; K07673; K08475; K07639; K00873; K07711; K11328; K13533; K07683; K11354; K07778; K11633; K02575; K07768; K07651; K07698; K07718; K02478; K07679; K07648;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas;s__Pusillimonas sp002384935;
genomedb_acc GCA_002384935.1;
genomedb_target db:genomedb|GCA_002384935.1|DGCD01000017.1_9 105 863 evalue:1.4e-213 qcov:86.70 identity:51.40;
kegg_pathway_id 03090; 00620; 04011; 02020; 00340; 00790; 00710; 00010; 00240; 03030; 05111; 00230;
kegg_pathway_name Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Histidine metabolism; Folate biosynthesis; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Pyrimidine metabolism; DNA replication; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF02518; PF00512; PF00989; PF08447; PF08448; PF13188; PF13426; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:7.8e-20 score:70.7 best_domain_score:69.4 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:6.7e-09 score:34.9 best_domain_score:33.2 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:1e-23 score:82.7 best_domain_score:46.0 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:1.1e-24 score:85.8 best_domain_score:45.9 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:3.4e-29 score:100.5 best_domain_score:53.6 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:6.8e-12 score:44.4 best_domain_score:23.9 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:1.2e-27 score:95.4 best_domain_score:57.1 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:2.7e-17 score:62.2 best_domain_score:60.4 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:3.5e-32 score:110.3 best_domain_score:62.9 name:TIGR00229;
tm_num 3;
41106 38479 transmembrane_helix
ID metaerg.pl|10354
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i38512-38580o38623-38691i38728-38787o;
41522 43351 CDS
ID metaerg.pl|10355
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
sp YES;
41522 41599 signal_peptide
ID metaerg.pl|10356
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
43653 44036 CDS
ID metaerg.pl|10357
allgo_ids GO:0003700; GO:0006355; GO:0003677;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__Pseudohongiella;s__Pseudohongiella sp002706685;
genomedb_acc GCA_002706685.1;
genomedb_target db:genomedb|GCA_002706685.1|MAY56574.1 2 125 evalue:6.4e-35 qcov:97.60 identity:60.50;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00392;
pfam_desc Bacterial regulatory proteins, gntR family;
pfam_id GntR;
pfam_target db:Pfam-A.hmm|PF00392.21 evalue:2.2e-18 score:64.9 best_domain_score:63.8 name:GntR;
sprot_desc Uncharacterized HTH-type transcriptional regulator YhcF;
sprot_id sp|P54590|YHCF_BACSU;
sprot_target db:uniprot_sprot|sp|P54590|YHCF_BACSU 10 116 evalue:5.5e-17 qcov:84.30 identity:40.20;
44033 44929 CDS
ID metaerg.pl|10358
allgo_ids GO:0005524;
allko_ids K01996; K06861; K02045; K02052; K02006; K01990; K01995; K09687;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Acidobacteriae;o__Acidobacteriales;f__Acidobacteriaceae;g__Terracidiphilus;s__Terracidiphilus sp003166055;
genomedb_acc GCA_003166055.1;
genomedb_target db:genomedb|GCA_003166055.1|PMWR01000303.1_6 1 296 evalue:5.5e-93 qcov:99.30 identity:59.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.1e-15 score:56.6 best_domain_score:33.2 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:9.6e-26 score:90.2 best_domain_score:89.5 name:ABC_tran;
44926 45591 CDS
ID metaerg.pl|10359
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Thermoanaerobaculia;o__UBA5066;f__UBA5066;g__UBA5066;s__UBA5066 sp002414905;
genomedb_acc GCA_002414905.1;
genomedb_target db:genomedb|GCA_002414905.1|DIAY01000273.1_3 3 221 evalue:1.9e-26 qcov:99.10 identity:35.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF13346;
pfam_desc ABC-2 family transporter protein;
pfam_id ABC2_membrane_5;
pfam_target db:Pfam-A.hmm|PF13346.6 evalue:9.5e-08 score:31.1 best_domain_score:30.8 name:ABC2_membrane_5;
tm_num 6;
44926 45591 transmembrane_helix
ID metaerg.pl|10360
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i44983-45036o45064-45123i45202-45270o45298-45366i45385-45453o45496-45564i;
45588 47789 CDS
ID metaerg.pl|10361
allgo_ids GO:0005524;
allko_ids K01990; K01998; K10111; K01995; K02049; K01996; K06861; K02045; K02006; K02052;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas oryziterrae;
genomedb_acc GCF_000420545.1;
genomedb_target db:genomedb|GCF_000420545.1|WP_081644678.1 14 730 evalue:2.4e-235 qcov:97.80 identity:59.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF13304; PF00005; PF01757;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; Acyltransferase family;
pfam_id AAA_21; ABC_tran; Acyl_transf_3;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2e-09 score:36.9 best_domain_score:23.8 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:7.7e-23 score:80.8 best_domain_score:80.2 name:ABC_tran; db:Pfam-A.hmm|PF01757.22 evalue:1e-34 score:119.4 best_domain_score:119.0 name:Acyl_transf_3;
tm_num 10;
45588 47789 transmembrane_helix
ID metaerg.pl|10362
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i45648-45716o45744-45812i45873-45941o46020-46088i46149-46208o46251-46319i46356-46424o46482-46550i46587-46655o46683-46751i;
47786 48631 CDS
ID metaerg.pl|10363
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas oryziterrae;
genomedb_acc GCF_000420545.1;
genomedb_target db:genomedb|GCF_000420545.1|WP_026802641.1 32 281 evalue:3.9e-85 qcov:89.00 identity:70.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF01061;
pfam_desc ABC-2 type transporter;
pfam_id ABC2_membrane;
pfam_target db:Pfam-A.hmm|PF01061.24 evalue:5.1e-11 score:41.6 best_domain_score:41.6 name:ABC2_membrane;
tm_num 7;
47786 48631 transmembrane_helix
ID metaerg.pl|10364
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology o47954-48022i48059-48127o48200-48268i48302-48370o48380-48448i48467-48526o48539-48607i;
48895 48971 tRNA
ID metaerg.pl|10365
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
name tRNA_Arg_ccg;
49795 49998 CDS
ID metaerg.pl|10366
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
tm_num 2;
49795 49998 transmembrane_helix
ID metaerg.pl|10367
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology o49822-49890i49903-49971o;
49995 50570 CDS
ID metaerg.pl|10368
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
sp YES;
tm_num 1;
49995 50069 lipoprotein_signal_peptide
ID metaerg.pl|10369
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
49995 50570 transmembrane_helix
ID metaerg.pl|10370
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i50013-50081o;
51769 50663 CDS
ID metaerg.pl|10371
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL39421.1 29 366 evalue:1.4e-135 qcov:91.80 identity:67.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF11199;
pfam_desc Protein of unknown function (DUF2891);
pfam_id DUF2891;
pfam_target db:Pfam-A.hmm|PF11199.8 evalue:5.1e-131 score:435.7 best_domain_score:435.5 name:DUF2891;
sp YES;
tm_num 1;
50663 50734 signal_peptide
ID metaerg.pl|10372
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
51769 50663 transmembrane_helix
ID metaerg.pl|10373
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i50681-50734o;
53559 51922 CDS
ID metaerg.pl|10374
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
sp YES;
tm_num 1;
51922 51984 signal_peptide
ID metaerg.pl|10375
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
53559 51922 transmembrane_helix
ID metaerg.pl|10376
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology o53470-53529i;
55067 53589 CDS
ID metaerg.pl|10377
genomedb_OC d__Bacteria;p__Binatota;c__Binatia;o__UTPRO1;f__UTPRO1;g__UTPRO1;s__UTPRO1 sp002050235;
genomedb_acc GCA_002050235.1;
genomedb_target db:genomedb|GCA_002050235.1|OQY66187.1 47 399 evalue:3.4e-15 qcov:71.70 identity:27.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
sp YES;
53589 53645 signal_peptide
ID metaerg.pl|10378
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
55419 56162 CDS
ID metaerg.pl|10379
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726609.1 12 241 evalue:2.6e-48 qcov:93.10 identity:44.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00563;
pfam_desc EAL domain;
pfam_id EAL;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:5e-40 score:136.7 best_domain_score:136.5 name:EAL;
56162 57034 CDS
ID metaerg.pl|10380
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726610.1 16 277 evalue:6.3e-62 qcov:90.30 identity:46.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
57098 57670 CDS
ID metaerg.pl|10381
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
sp YES;
57098 57244 signal_peptide
ID metaerg.pl|10382
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
58371 57871 CDS
ID metaerg.pl|10383
allec_ids 2.7.13.3;
allgo_ids GO:0000160; GO:0005524; GO:0000155; GO:0009881; GO:0009405; GO:0018298;
allko_ids K07675; K07717; K07647; K10125; K04757; K12767; K02486; K07644; K07709; K06379; K07676; K10681; K10715; K02030; K13587; K07636; K07653; K02480; K02482; K07710; K10916; K02668; K02491; K11231; K08282; K07708; K07677; K11640; K02484; K07642; K07648; K07679; K07778; K08475; K07639; K07673; K07641; K07646; K03407; K07682; K07654;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Nitrococcaceae;g__E85;s__E85 sp003149435;
genomedb_acc GCF_003149435.1;
genomedb_target db:genomedb|GCF_003149435.1|WP_109675355.1 34 163 evalue:6.2e-38 qcov:78.30 identity:61.50;
kegg_pathway_id 05111; 04011; 02020; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:4.5e-18 score:64.7 best_domain_score:64.4 name:Response_reg;
sprot_desc Blue-light-activated protein;
sprot_id sp|Q48IV1|LOVHK_PSE14;
sprot_target db:uniprot_sprot|sp|Q48IV1|LOVHK_PSE14 27 166 evalue:1.3e-13 qcov:84.30 identity:33.10;
60098 58371 CDS
ID metaerg.pl|10384
allgo_ids GO:0000155; GO:0007165;
allko_ids K11520; K07769; K14509; K02486; K11383; K12767; K11357; K02342; K11629; K10125; K04757; K13040; K10942; K07647; K07680; K07717; K07675; K01769; K10681; K07676; K06379; K07650; K13532; K07709; K07644; K02480; K08801; K02482; K07636; K07638; K07653; K13587; K11527; K02030; K07678; K10715; K03388; K02668; K10916; K08479; K07674; K07716; K02489; K07697; K01768; K07656; K07710; K07640; K07677; K07645; K07708; K08282; K07704; K07643; K11231; K01090; K02491; K11711; K07642; K02484; K11640; K04486; K11356; K07768; K11633; K07778; K11328; K13533; K07711; K07648; K02478; K07679; K07698; K07718; K07651; K07777; K07649; K00936; K07682; K07654; K03407; K07673; K01120; K08475; K07639; K07646; K13598; K07641; K07652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Kiloniellales;f__Fodinicurvataceae;g__Fodinicurvata;s__Fodinicurvata fenggangensis;
genomedb_acc GCF_000686045.1;
genomedb_target db:genomedb|GCF_000686045.1|WP_051608935.1 12 565 evalue:2.7e-104 qcov:96.30 identity:41.40;
kegg_pathway_id 00340; 00790; 03090; 04011; 02020; 03030; 05111; 00230;
kegg_pathway_name Histidine metabolism; Folate biosynthesis; Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General; DNA replication; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF02518; PF00512; PF00989; PF08448; PF13188; PF13426;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS domain; PAS domain;
pfam_id HATPase_c; HisKA; PAS; PAS_4; PAS_8; PAS_9;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:2.1e-19 score:69.3 best_domain_score:68.4 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.9e-09 score:36.7 best_domain_score:35.3 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:1.3e-08 score:34.1 best_domain_score:19.1 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:4.1e-13 score:48.8 best_domain_score:33.3 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:5.9e-13 score:47.8 best_domain_score:34.0 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:2.5e-07 score:30.1 best_domain_score:19.0 name:PAS_9;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:7.2e-21 score:73.8 best_domain_score:56.0 name:TIGR00229;
60399 60091 CDS
ID metaerg.pl|10385
allgo_ids GO:0048511;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Salinisphaeraceae;g__Salinisphaera;s__Salinisphaera sp002433465;
genomedb_acc GCA_002433465.1;
genomedb_target db:genomedb|GCA_002433465.1|DJIE01000201.1_6 3 100 evalue:1.3e-06 qcov:96.10 identity:34.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF07689;
pfam_desc KaiB domain;
pfam_id KaiB;
pfam_target db:Pfam-A.hmm|PF07689.12 evalue:4.4e-09 score:35.2 best_domain_score:34.9 name:KaiB;
62131 60386 CDS
ID metaerg.pl|10386
allec_ids 2.7.11.1;
allgo_ids GO:0003678; GO:0005524; GO:0006260; GO:0003677; GO:0000287; GO:0004674; GO:0004712; GO:0007623; GO:0042752; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Nitrococcaceae;g__Arhodomonas;s__Arhodomonas aquaeolei;
genomedb_acc GCF_000374645.1;
genomedb_target db:genomedb|GCF_000374645.1|WP_018718123.1 18 569 evalue:4.1e-161 qcov:95.00 identity:54.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF13191; PF13481; PF06745; PF03796; PF09848; PF07088; PF08423; PF00154;
pfam_desc AAA ATPase domain; AAA domain; KaiC; DnaB-like helicase C terminal domain; Uncharacterized conserved protein (DUF2075); GvpD gas vesicle protein; Rad51; recA bacterial DNA recombination protein;
pfam_id AAA_16; AAA_25; ATPase; DnaB_C; DUF2075; GvpD; Rad51; RecA;
pfam_target db:Pfam-A.hmm|PF13191.6 evalue:6.9e-09 score:35.5 best_domain_score:20.1 name:AAA_16; db:Pfam-A.hmm|PF13481.6 evalue:4.3e-18 score:64.8 best_domain_score:32.4 name:AAA_25; db:Pfam-A.hmm|PF06745.13 evalue:1.9e-92 score:308.0 best_domain_score:169.6 name:ATPase; db:Pfam-A.hmm|PF03796.15 evalue:1.6e-09 score:36.7 best_domain_score:21.1 name:DnaB_C; db:Pfam-A.hmm|PF09848.9 evalue:4.2e-05 score:22.2 best_domain_score:11.7 name:DUF2075; db:Pfam-A.hmm|PF07088.11 evalue:6.2e-09 score:34.2 best_domain_score:24.3 name:GvpD; db:Pfam-A.hmm|PF08423.11 evalue:4.4e-08 score:31.9 best_domain_score:16.0 name:Rad51; db:Pfam-A.hmm|PF00154.21 evalue:1.2e-06 score:27.5 best_domain_score:13.9 name:RecA;
sprot_desc Circadian clock protein kinase KaiC;
sprot_id sp|Q8GGL1|KAIC_SYNLI;
sprot_target db:uniprot_sprot|sp|Q8GGL1|KAIC_SYNLI 21 491 evalue:6.1e-71 qcov:81.10 identity:34.50;
64492 62447 CDS
ID metaerg.pl|10387
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__UBA2363;g__UBA2363;s__UBA2363 sp002344355;
genomedb_acc GCA_002344355.1;
genomedb_target db:genomedb|GCA_002344355.1|DDTN01000028.1_10 1 673 evalue:2.1e-249 qcov:98.80 identity:63.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF01979;
pfam_desc Amidohydrolase family;
pfam_id Amidohydro_1;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:1.4e-16 score:60.0 best_domain_score:57.6 name:Amidohydro_1;
sp YES;
62447 62509 signal_peptide
ID metaerg.pl|10388
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
64698 67373 CDS
ID metaerg.pl|10389
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K12323; K13303; K05688; K13304; K05121; K04688; K13414; K02486; K12767; K08853; K08841; K07675; K02178; K12321; K04367; K01769; K08847; K01728; K04443; K04372; K04445; K02480; K05091; K05097; K12320; K05096; K05098; K08809; K08792; K04373; K05112; K01768; K08850; K08286; K04421; K04420; K08282; K08856; K08333; K05102; K05103; K08855; K04444; K05105; K05744; K08846; K11889; K08848; K08897; K11912; K08790; K08854; K11228; K05113; K08810; K08884; K12324; K12318; K12319; K07683; K07778; K04442; K11623; K05111; K03407; K07682; K04424; K05743; K13302; K00924; K07673; K11265;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37426.1 4 849 evalue:5.5e-133 qcov:94.90 identity:39.00;
kegg_pathway_id 00230; 04510; 04360; 04530; 04640; 04111; 04140; 04110; 05012; 04150; 00040; 02020; 04011; 04010;
kegg_pathway_name Purine metabolism; Focal adhesion; Axon guidance; Tight junction; Hematopoietic cell lineage; Cell cycle - yeast; Regulation of autophagy; Cell cycle; Parkinson's disease; mTOR signaling pathway; Pentose and glucuronate interconversions; Two-component system - General; MAPK signaling pathway - yeast; MAPK signaling pathway;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF06293; PF00069; PF07714; PF00515; PF13374; PF13424; PF07719; PF13176; PF13181; PF17874;
pfam_desc Lipopolysaccharide kinase (Kdo/WaaP) family; Protein kinase domain; Protein tyrosine kinase; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; MalT-like TPR region;
pfam_id Kdo; Pkinase; Pkinase_Tyr; TPR_1; TPR_10; TPR_12; TPR_2; TPR_7; TPR_8; TPR_MalT;
pfam_target db:Pfam-A.hmm|PF06293.14 evalue:2.8e-08 score:32.6 best_domain_score:29.9 name:Kdo; db:Pfam-A.hmm|PF00069.25 evalue:5.1e-37 score:126.9 best_domain_score:126.1 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:2.7e-30 score:104.7 best_domain_score:103.3 name:Pkinase_Tyr; db:Pfam-A.hmm|PF00515.28 evalue:1.6e-15 score:55.5 best_domain_score:15.5 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:1.3e-55 score:183.1 best_domain_score:44.8 name:TPR_10; db:Pfam-A.hmm|PF13424.6 evalue:1.2e-64 score:213.8 best_domain_score:60.9 name:TPR_12; db:Pfam-A.hmm|PF07719.17 evalue:9.2e-10 score:37.1 best_domain_score:15.1 name:TPR_2; db:Pfam-A.hmm|PF13176.6 evalue:7.5e-08 score:31.1 best_domain_score:13.5 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:2.2e-14 score:51.7 best_domain_score:12.3 name:TPR_8; db:Pfam-A.hmm|PF17874.1 evalue:5e-08 score:31.9 best_domain_score:28.3 name:TPR_MalT;
tm_num 1;
64698 67373 transmembrane_helix
ID metaerg.pl|10390
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i65805-65873o;
67370 67963 CDS
ID metaerg.pl|10391
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37302.1 2 197 evalue:8.4e-50 qcov:99.50 identity:55.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF08279; PF07638;
pfam_desc HTH domain; ECF sigma factor;
pfam_id HTH_11; Sigma70_ECF;
pfam_target db:Pfam-A.hmm|PF08279.12 evalue:2.7e-05 score:23.2 best_domain_score:22.2 name:HTH_11; db:Pfam-A.hmm|PF07638.11 evalue:1.3e-35 score:122.2 best_domain_score:122.0 name:Sigma70_ECF;
tigrfam_acc TIGR02937; TIGR02999;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor, TIGR02999 family;
tigrfam_name sigma70-ECF; Sig-70_X6;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:3.4e-14 score:52.0 best_domain_score:51.3 name:TIGR02937; db:TIGRFAMs.hmm|TIGR02999 evalue:1.2e-46 score:158.1 best_domain_score:157.9 name:TIGR02999;
68053 68541 CDS
ID metaerg.pl|10392
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
sp YES;
68053 68130 lipoprotein_signal_peptide
ID metaerg.pl|10393
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
69300 68593 CDS
ID metaerg.pl|10394
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
sp YES;
tm_num 2;
68593 68682 signal_peptide
ID metaerg.pl|10395
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
69300 68593 transmembrane_helix
ID metaerg.pl|10396
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology o68602-68661i69238-69294o;
69867 69313 CDS
ID metaerg.pl|10397
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
sp YES;
69313 69438 signal_peptide
ID metaerg.pl|10398
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
70026 75320 CDS
ID metaerg.pl|10399
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas chromatireducens;
genomedb_acc GCF_001545155.1;
genomedb_target db:genomedb|GCF_001545155.1|WP_066451626.1 13 1761 evalue:0.0e+00 qcov:99.10 identity:43.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00754; PF00092; PF13519;
pfam_desc F5/8 type C domain; von Willebrand factor type A domain; von Willebrand factor type A domain;
pfam_id F5_F8_type_C; VWA; VWA_2;
pfam_target db:Pfam-A.hmm|PF00754.25 evalue:6.9e-08 score:31.9 best_domain_score:22.9 name:F5_F8_type_C; db:Pfam-A.hmm|PF00092.28 evalue:1.2e-07 score:31.4 best_domain_score:30.0 name:VWA; db:Pfam-A.hmm|PF13519.6 evalue:3.4e-08 score:33.3 best_domain_score:30.8 name:VWA_2;
sp YES;
70026 70088 signal_peptide
ID metaerg.pl|10400
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
75345 77729 CDS
ID metaerg.pl|10401
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078089173.1 19 794 evalue:5.2e-159 qcov:97.70 identity:42.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
sp YES;
tm_num 1;
75345 75437 signal_peptide
ID metaerg.pl|10402
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
75345 77729 transmembrane_helix
ID metaerg.pl|10403
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i75381-75449o;
77739 79187 CDS
ID metaerg.pl|10404
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A denitrificans;
genomedb_acc GCF_002000365.1;
genomedb_target db:genomedb|GCF_002000365.1|WP_077280005.1 24 481 evalue:3.8e-120 qcov:95.00 identity:50.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
sp YES;
77739 77810 signal_peptide
ID metaerg.pl|10405
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
81574 79223 CDS
ID metaerg.pl|10406
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Henriciella;s__Henriciella sp001854405;
genomedb_acc GCF_001854405.1;
genomedb_target db:genomedb|GCF_001854405.1|WP_083332645.1 6 777 evalue:1.0e-42 qcov:98.60 identity:25.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF00515; PF13374; PF13424; PF14559; PF07719; PF13174; PF13181; PF17874; PF00486;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; MalT-like TPR region; Transcriptional regulatory protein, C terminal;
pfam_id TPR_1; TPR_10; TPR_12; TPR_19; TPR_2; TPR_6; TPR_8; TPR_MalT; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:3.2e-08 score:32.3 best_domain_score:7.7 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:1.4e-08 score:33.6 best_domain_score:17.9 name:TPR_10; db:Pfam-A.hmm|PF13424.6 evalue:5.2e-23 score:80.4 best_domain_score:37.5 name:TPR_12; db:Pfam-A.hmm|PF14559.6 evalue:5.6e-11 score:42.0 best_domain_score:36.0 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:2.9e-10 score:38.7 best_domain_score:10.2 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:1e-06 score:28.2 best_domain_score:13.9 name:TPR_6; db:Pfam-A.hmm|PF13181.6 evalue:1.9e-06 score:26.9 best_domain_score:11.1 name:TPR_8; db:Pfam-A.hmm|PF17874.1 evalue:1.1e-09 score:37.4 best_domain_score:24.3 name:TPR_MalT; db:Pfam-A.hmm|PF00486.28 evalue:5.9e-16 score:57.6 best_domain_score:56.4 name:Trans_reg_C;
tm_num 1;
81574 79223 transmembrane_helix
ID metaerg.pl|10407
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
topology i79601-79654o;
81880 83493 CDS
ID metaerg.pl|10408
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Rubidibacteraceae;g__Halothece;s__Halothece salina;
genomedb_acc GCF_000317615.1;
genomedb_target db:genomedb|GCF_000317615.1|WP_015228140.1 31 521 evalue:6.7e-33 qcov:91.30 identity:29.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
pfam_acc PF13229;
pfam_desc Right handed beta helix region;
pfam_id Beta_helix;
pfam_target db:Pfam-A.hmm|PF13229.6 evalue:1.3e-11 score:43.8 best_domain_score:27.4 name:Beta_helix;
sp YES;
81880 81951 signal_peptide
ID metaerg.pl|10409
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.105912; 58.5757; 0.0590332; 0.026241; 58.3845;
>Feature NODE_76_length_83022_cov_7.95132
342 1 CDS
ID metaerg.pl|10410
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
tm_num 1;
342 1 transmembrane_helix
ID metaerg.pl|10411
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology i94-162o;
1304 339 CDS
ID metaerg.pl|10412
allec_ids 6.3.2.3;
allgo_ids GO:0004363; GO:0005524; GO:0006750; GO:0005737; GO:0046872;
allko_ids K01920;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D;s__Pseudomonas_D sp002979975;
genomedb_acc GCF_002979975.1;
genomedb_target db:genomedb|GCF_002979975.1|WP_105644348.1 4 312 evalue:2.3e-113 qcov:96.30 identity:64.10;
kegg_pathway_id 00480; 00251;
kegg_pathway_name Glutathione metabolism; Glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id GLUTATHIONESYN-PWY; PWY-4041;
metacyc_pathway_name glutathione biosynthesis;; γ-glutamyl cycle;;
metacyc_pathway_type Reductants;; Reductants; Super-Pathways;;
pfam_acc PF02955; PF02951; PF08443;
pfam_desc Prokaryotic glutathione synthetase, ATP-grasp domain; Prokaryotic glutathione synthetase, N-terminal domain; RimK-like ATP-grasp domain;
pfam_id GSH-S_ATP; GSH-S_N; RimK;
pfam_target db:Pfam-A.hmm|PF02955.16 evalue:1.1e-73 score:245.6 best_domain_score:245.2 name:GSH-S_ATP; db:Pfam-A.hmm|PF02951.14 evalue:9.9e-39 score:131.4 best_domain_score:130.7 name:GSH-S_N; db:Pfam-A.hmm|PF08443.11 evalue:2.5e-09 score:36.2 best_domain_score:35.6 name:RimK;
sprot_desc Glutathione synthetase;
sprot_id sp|Q9I697|GSHB_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I697|GSHB_PSEAE 4 321 evalue:2.2e-107 qcov:99.10 identity:61.00;
tigrfam_acc TIGR01380;
tigrfam_desc glutathione synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name glut_syn;
tigrfam_sub1role Glutathione and analogs;
tigrfam_target db:TIGRFAMs.hmm|TIGR01380 evalue:5.4e-126 score:418.9 best_domain_score:418.7 name:TIGR01380;
1605 2000 CDS
ID metaerg.pl|10413
allgo_ids GO:0000160;
allko_ids K07716; K02489; K01768; K07710; K03388; K02668; K10916; K08479; K11527; K07678; K10715; K02480; K02482; K07636; K07653; K07709; K07644; K07676; K10681; K06379; K07647; K07717; K07675; K07769; K13761; K02486; K11383; K12767; K11357; K10125; K04757; K07673; K01120; K07639; K08475; K07646; K07641; K07652; K07682; K07654; K07637; K03407; K07648; K02478; K07679; K07718; K07651; K07768; K11354; K07778; K07711; K02484; K11640; K11356; K11711; K07642; K11231; K13490; K02491; K07677; K07645; K07708; K08282; K01937; K07704; K10909; K02657;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A;s__Pseudomonas_A stutzeri_S;
genomedb_acc GCA_002345575.1;
genomedb_target db:genomedb|GCA_002345575.1|DDVX01000016.1_82 1 127 evalue:9.2e-53 qcov:96.90 identity:84.30;
kegg_pathway_id 02020; 04011; 03090; 00230; 05111; 00790; 00240;
kegg_pathway_name Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system; Purine metabolism; Vibrio cholerae pathogenic cycle; Folate biosynthesis; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:1.2e-26 score:92.4 best_domain_score:92.2 name:Response_reg;
sprot_desc hypothetical protein;
sprot_id sp|P46384|PILG_PSEAE;
sprot_target db:uniprot_sprot|sp|P46384|PILG_PSEAE 1 126 evalue:6.4e-53 qcov:96.20 identity:82.50;
2209 2574 CDS
ID metaerg.pl|10414
allgo_ids GO:0000160;
allko_ids K07652; K07673; K01120; K07639; K08475; K07646; K07641; K07637; K03407; K00936; K07682; K07654; K07718; K07651; K07648; K02478; K07679; K07711; K00873; K07768; K11354; K07778; K11640; K11356; K02484; K00760; K07642; K11711; K13490; K11231; K08282; K01937; K10909; K07704; K07645; K07708; K07677; K01768; K07710; K07716; K02489; K10916; K08479; K03388; K02668; K07678; K10715; K11527; K07636; K07653; K02480; K02482; K07644; K07709; K10681; K07676; K06379; K01769; K07717; K07675; K07647; K11357; K10125; K04757; K07769; K13761; K11383; K02486; K12767; K02658;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E kilonensis_B;
genomedb_acc GCA_003096395.1;
genomedb_target db:genomedb|GCA_003096395.1|PVY54385.1 1 121 evalue:8.3e-40 qcov:100.00 identity:66.10;
kegg_pathway_id 00790; 03090; 00620; 04011; 02020; 00240; 00230; 05111; 00983; 00010; 00710;
kegg_pathway_name Folate biosynthesis; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Drug metabolism - other enzymes; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:2.9e-26 score:91.1 best_domain_score:90.9 name:Response_reg;
sprot_desc hypothetical protein;
sprot_id sp|P43501|PILH_PSEAE;
sprot_target db:uniprot_sprot|sp|P43501|PILH_PSEAE 1 121 evalue:2.2e-39 qcov:100.00 identity:63.60;
2567 3172 CDS
ID metaerg.pl|10415
allgo_ids GO:0006935; GO:0007165;
allko_ids K02659;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000009.1_214 28 198 evalue:5.1e-34 qcov:85.10 identity:43.90;
kegg_pathway_id 03090; 02020;
kegg_pathway_name Type II secretion system; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF01584;
pfam_desc CheW-like domain;
pfam_id CheW;
pfam_target db:Pfam-A.hmm|PF01584.19 evalue:9.3e-28 score:95.8 best_domain_score:95.4 name:CheW;
sprot_desc hypothetical protein;
sprot_id sp|P43502|PILI_PSEAE;
sprot_target db:uniprot_sprot|sp|P43502|PILI_PSEAE 27 199 evalue:2.7e-26 qcov:86.10 identity:39.90;
3203 4528 CDS
ID metaerg.pl|10416
allgo_ids GO:0007165; GO:0016020; GO:0016021; GO:0004888; GO:0043448; GO:0006935;
allko_ids K02660;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000367.1_25 12 406 evalue:3.7e-138 qcov:89.60 identity:73.90;
kegg_pathway_id 03090; 02020;
kegg_pathway_name Type II secretion system; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00015;
pfam_desc Methyl-accepting chemotaxis protein (MCP) signalling domain;
pfam_id MCPsignal;
pfam_target db:Pfam-A.hmm|PF00015.21 evalue:4.4e-41 score:139.8 best_domain_score:139.8 name:MCPsignal;
sprot_desc Putative methyl-accepting chemotaxis AlkN;
sprot_id sp|Q0VTI9|ALKN_ALCBS;
sprot_target db:uniprot_sprot|sp|Q0VTI9|ALKN_ALCBS 75 407 evalue:5.4e-43 qcov:75.50 identity:49.20;
tm_num 2;
3203 4528 transmembrane_helix
ID metaerg.pl|10417
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology i3236-3304o3332-3388i;
4593 11510 CDS
ID metaerg.pl|10418
allgo_ids GO:0006935; GO:0007165;
allko_ids K11231; K13490; K02491; K07708; K07645; K07677; K08282; K01937; K07704; K10909; K00760; K02484; K11640; K11356; K11711; K07642; K07648; K02478; K07679; K07718; K07651; K07768; K11354; K07778; K00873; K07711; K01120; K07673; K08475; K07639; K07646; K07641; K07652; K07682; K00936; K07654; K07637; K03407; K10942; K07647; K07717; K07675; K07769; K13761; K11383; K02486; K12767; K11357; K10125; K04757; K07709; K07644; K01769; K07676; K10681; K06379; K07650; K13587; K11527; K02030; K07678; K10715; K02480; K14489; K02482; K07636; K07653; K07716; K02489; K07697; K01768; K07656; K07710; K03388; K02668; K10916; K08479;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_O;s__Pseudomonas_O kuykendallii;
genomedb_acc GCF_900106975.1;
genomedb_target db:genomedb|GCF_900106975.1|WP_090224903.1 1 2305 evalue:0.0e+00 qcov:100.00 identity:37.30;
kegg_pathway_id 00240; 00230; 05111; 00983; 00710; 00010; 00790; 00620; 03090; 02020; 04011;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Drug metabolism - other enzymes; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Folate biosynthesis; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF01584; PF02895; PF02518; PF01627; PF00072;
pfam_desc CheW-like domain; Signal transducing histidine kinase, homodimeric domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain; Response regulator receiver domain;
pfam_id CheW; H-kinase_dim; HATPase_c; Hpt; Response_reg;
pfam_target db:Pfam-A.hmm|PF01584.19 evalue:2.1e-21 score:75.2 best_domain_score:73.5 name:CheW; db:Pfam-A.hmm|PF02895.14 evalue:1.1e-05 score:25.0 best_domain_score:21.1 name:H-kinase_dim; db:Pfam-A.hmm|PF02518.26 evalue:2.1e-15 score:56.4 best_domain_score:55.3 name:HATPase_c; db:Pfam-A.hmm|PF01627.23 evalue:2.2e-55 score:184.1 best_domain_score:53.0 name:Hpt; db:Pfam-A.hmm|PF00072.24 evalue:5.2e-29 score:99.9 best_domain_score:98.2 name:Response_reg;
11516 11995 CDS
ID metaerg.pl|10419
allgo_ids GO:0006935; GO:0007165;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2965;s__UBA2965 sp002348385;
genomedb_acc GCA_002348385.1;
genomedb_target db:genomedb|GCA_002348385.1|DEBD01000034.1_45 2 148 evalue:6.0e-22 qcov:92.50 identity:43.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF01584;
pfam_desc CheW-like domain;
pfam_id CheW;
pfam_target db:Pfam-A.hmm|PF01584.19 evalue:1.9e-09 score:36.5 best_domain_score:36.3 name:CheW;
12348 12097 CDS
ID metaerg.pl|10420
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D;s__Pseudomonas_D pelagia;
genomedb_acc GCF_000410875.1;
genomedb_target db:genomedb|GCF_000410875.1|WP_084671945.1 1 65 evalue:9.7e-16 qcov:78.30 identity:62.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF06945;
pfam_desc Protein of unknown function (DUF1289);
pfam_id DUF1289;
pfam_target db:Pfam-A.hmm|PF06945.13 evalue:1e-14 score:53.3 best_domain_score:52.9 name:DUF1289;
12542 13093 CDS
ID metaerg.pl|10421
allec_ids 1.16.-.-;
allgo_ids GO:0006879; GO:0008199; GO:0005737; GO:0009295; GO:0003677; GO:0016722;
allko_ids K04047;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halieaceae;g__Haliea;s__Haliea sp002414665;
genomedb_acc GCA_002414665.1;
genomedb_target db:genomedb|GCA_002414665.1|DIAF01000004.1_16 1 178 evalue:8.0e-71 qcov:97.30 identity:76.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00210;
pfam_desc Ferritin-like domain;
pfam_id Ferritin;
pfam_target db:Pfam-A.hmm|PF00210.24 evalue:2.4e-22 score:78.6 best_domain_score:78.3 name:Ferritin;
sprot_desc DNA protection during starvation protein;
sprot_id sp|A0R692|DPS_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R692|DPS_MYCS2 5 182 evalue:4.0e-53 qcov:97.30 identity:58.40;
14282 13545 CDS
ID metaerg.pl|10422
allec_ids 2.1.1.193; 2.1.1.-;
allgo_ids GO:0006364; GO:0008168; GO:0005737;
allko_ids K09761;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D;s__Pseudomonas_D pachastrellae;
genomedb_acc GCF_900114765.1;
genomedb_target db:genomedb|GCF_900114765.1|WP_083728084.1 1 244 evalue:3.7e-47 qcov:99.60 identity:46.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id PWY-6153; PWY-3542; ALL-CHORISMATE-PWY; PWY-4021; PWY-5041; PWY-6442; PWY-6575; CODH-PWY; PWY-5467; PWY-6477; PWY-1422; PWY-6113; PWY-5729; PWYG-321; PWY-5305; PWY-5864; PWY-5975; PWY-5876; PWY-1061; PWY-6142; UBISYN-PWY; PWY-6154; PWY-6424; PWY-5856; METH-ACETATE-PWY; PWY-6303; PWY-5857; PWY-5855; PWY-5209; PWY-6151; PWY-6292; PWY-5987; PWY-5479; PWY-6146; PWY-6395; PWY-6427; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-5773; PWY-6519; METHIONINE-DEG1-PWY; PWY-5328; CO2FORM-PWY; PWY-5116; PWY-1581;
metacyc_pathway_name autoinducer AI-2 biosynthesis I;; choline biosynthesis II;; superpathway of chorismate metabolism;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; gramine biosynthesis;; gibberellin inactivation II (methylation);; vitamin E biosynthesis (tocopherols);; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; mycolate biosynthesis;; bixin biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; magnoflorine biosynthesis;; homogalacturonan biosynthesis;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; ubiquinol-9 biosynthesis (prokaryotic);; methanogenesis from acetate;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; superpathway of L-cysteine biosynthesis (mammalian);; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of seleno-compound metabolism;; rot-2'-enonate biosynthesis;; xanthohumol biosynthesis;; biotin biosynthesis I;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;;
metacyc_pathway_type Autoinducer-Biosynthesis;; Choline-Biosynthesis;; Super-Pathways;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Autotrophic-CO2-Fixation;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis;; APOCAROTENOID-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Super-Pathways; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Rotenoids-Biosynthesis;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;;
pfam_acc PF04452;
pfam_desc RNA methyltransferase;
pfam_id Methyltrans_RNA;
pfam_target db:Pfam-A.hmm|PF04452.14 evalue:1.8e-61 score:206.6 best_domain_score:206.4 name:Methyltrans_RNA;
sprot_desc Ribosomal RNA small subunit methyltransferase E;
sprot_id sp|P37995|RSME_DICD3;
sprot_target db:uniprot_sprot|sp|P37995|RSME_DICD3 1 245 evalue:3.0e-35 qcov:100.00 identity:36.70;
tigrfam_acc TIGR00046;
tigrfam_desc RNA methyltransferase, RsmE family;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00046;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00046 evalue:2.3e-52 score:176.9 best_domain_score:176.6 name:TIGR00046;
15141 14290 CDS
ID metaerg.pl|10423
allec_ids 1.5.1.20;
allgo_ids GO:0004489; GO:0006555; GO:0055114; GO:0005829; GO:0071949; GO:0009086; GO:0006730; GO:0035999;
allko_ids K00297;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000009.1_209 6 276 evalue:8.8e-93 qcov:95.80 identity:61.30;
kegg_pathway_id 00680; 00670;
kegg_pathway_name Methane metabolism; One carbon pool by folate;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id PWY-3841; PWY-2201; 1CMET2-PWY;
metacyc_pathway_name folate transformations II;; folate transformations I;; N10-formyl-tetrahydrofolate biosynthesis;;
metacyc_pathway_type Folate-Transformations;; Folate-Transformations;; Folate-Biosynthesis;;
pfam_acc PF02219;
pfam_desc Methylenetetrahydrofolate reductase;
pfam_id MTHFR;
pfam_target db:Pfam-A.hmm|PF02219.17 evalue:8.4e-82 score:273.9 best_domain_score:273.7 name:MTHFR;
sprot_desc 5,10-methylenetetrahydrofolate reductase;
sprot_id sp|O67422|METF_AQUAE;
sprot_target db:uniprot_sprot|sp|O67422|METF_AQUAE 7 275 evalue:2.6e-59 qcov:95.10 identity:42.70;
tigrfam_acc TIGR00676;
tigrfam_desc methylenetetrahydrofolate reductase [NAD(P)H];
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name fadh2;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00676 evalue:5.3e-90 score:300.6 best_domain_score:300.5 name:TIGR00676;
16315 15152 CDS
ID metaerg.pl|10424
allec_ids 2.5.1.6;
allgo_ids GO:0004478; GO:0006556; GO:0005737; GO:0005524; GO:0000287; GO:0006730;
allko_ids K00789;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__UBA3067;g__GCA-002402085;s__GCA-002402085 sp002402085;
genomedb_acc GCA_002402085.1;
genomedb_target db:genomedb|GCA_002402085.1|PCJ14999.1 1 387 evalue:6.5e-171 qcov:100.00 identity:76.50;
kegg_pathway_id 00450; 00271;
kegg_pathway_name Selenoamino acid metabolism; Methionine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id SAM-PWY; PWY-5041; MET-SAM-PWY; PWY-6292; PWY0-781; PWY-6151; PWY-5328; METHIONINE-DEG1-PWY;
metacyc_pathway_name S-adenosyl-L-methionine biosynthesis;; S-adenosyl-L-methionine cycle II;; superpathway of S-adenosyl-L-methionine biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; aspartate superpathway;; S-adenosyl-L-methionine cycle I;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);;
metacyc_pathway_type Cofactor-Biosynthesis;; S-adenosyl-L-methionine-cycle;; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; Super-Pathways;; S-adenosyl-L-methionine-cycle; Super-Pathways;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;;
pfam_acc PF02773; PF02772; PF00438;
pfam_desc S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain;
pfam_id S-AdoMet_synt_C; S-AdoMet_synt_M; S-AdoMet_synt_N;
pfam_target db:Pfam-A.hmm|PF02773.16 evalue:9.8e-69 score:228.9 best_domain_score:227.9 name:S-AdoMet_synt_C; db:Pfam-A.hmm|PF02772.16 evalue:1.1e-45 score:154.0 best_domain_score:152.7 name:S-AdoMet_synt_M; db:Pfam-A.hmm|PF00438.20 evalue:1.5e-38 score:130.7 best_domain_score:129.9 name:S-AdoMet_synt_N;
sprot_desc S-adenosylmethionine synthase;
sprot_id sp|A6W3D6|METK_MARMS;
sprot_target db:uniprot_sprot|sp|A6W3D6|METK_MARMS 1 386 evalue:2.0e-158 qcov:99.70 identity:76.20;
tigrfam_acc TIGR01034;
tigrfam_desc methionine adenosyltransferase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name metK;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01034 evalue:2.7e-182 score:605.0 best_domain_score:604.8 name:TIGR01034;
16587 18578 CDS
ID metaerg.pl|10425
allec_ids 2.2.1.1;
allgo_ids GO:0005829; GO:0046872; GO:0004802; GO:0006098;
allko_ids K00163; K00615;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Nitrococcaceae;g__E85;s__E85 sp003149435;
genomedb_acc GCF_003149435.1;
genomedb_target db:genomedb|GCF_003149435.1|WP_109680087.1 1 660 evalue:1.3e-243 qcov:99.50 identity:63.70;
kegg_pathway_id 00620; 00252; 01051; 00650; 00290; 00010; 00710; 00030; 00020;
kegg_pathway_name Pyruvate metabolism; Alanine and aspartate metabolism; Biosynthesis of ansamycins; Butanoate metabolism; Valine, leucine and isoleucine biosynthesis; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Pentose phosphate pathway; Citrate cycle (TCA cycle);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id PWY-5723; PHOTOALL-PWY; NONOXIPENT-PWY; P124-PWY; P185-PWY; PWY-5979; PWY-1861; P21-PWY; PENTOSE-P-PWY; PWY-5993; CALVIN-PWY;
metacyc_pathway_name Rubisco shunt;; oxygenic photosynthesis;; pentose phosphate pathway (non-oxidative branch);; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; 3-amino-5-hydroxybenzoate biosynthesis;; formaldehyde assimilation II (assimilatory RuMP Cycle);; pentose phosphate pathway (partial);; pentose phosphate pathway;; superpathway of rifamycin B biosynthesis;; Calvin-Benson-Bassham cycle;;
metacyc_pathway_type Energy-Metabolism;; Photosynthesis; Super-Pathways;; Pentose-Phosphate-Cycle;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Formaldehyde-Assimilation;; Pentose-Phosphate-Cycle;; Pentose-Phosphate-Cycle; Super-Pathways;; Antibiotic-Biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;;
pfam_acc PF02780; PF00456; PF02779;
pfam_desc Transketolase, C-terminal domain; Transketolase, thiamine diphosphate binding domain; Transketolase, pyrimidine binding domain;
pfam_id Transketolase_C; Transketolase_N; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF02780.20 evalue:2.7e-07 score:29.7 best_domain_score:28.4 name:Transketolase_C; db:Pfam-A.hmm|PF00456.21 evalue:6.5e-152 score:504.5 best_domain_score:504.1 name:Transketolase_N; db:Pfam-A.hmm|PF02779.24 evalue:4.9e-42 score:142.8 best_domain_score:141.8 name:Transket_pyr;
sprot_desc Transketolase 1;
sprot_id sp|Q9KUP2|TKT1_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KUP2|TKT1_VIBCH 1 663 evalue:1.2e-235 qcov:100.00 identity:60.70;
tigrfam_acc TIGR00232;
tigrfam_desc transketolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tktlase_bact;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00232 evalue:3.7e-267 score:887.1 best_domain_score:886.9 name:TIGR00232;
18886 20064 CDS
ID metaerg.pl|10426
allec_ids 2.7.2.3;
allgo_ids GO:0004618; GO:0006096; GO:0005737; GO:0005524;
allko_ids K00927;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000117.1_15 2 389 evalue:2.4e-141 qcov:99.00 identity:68.80;
kegg_pathway_id 00010; 00710;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id ANAGLYCOLYSIS-PWY; PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; P441-PWY; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; CALVIN-PWY; PWY-5484; P461-PWY; P124-PWY; P185-PWY; GLUCONEO-PWY; PHOTOALL-PWY; GLYCOLYSIS; GLYCOLYSIS-E-D; P122-PWY;
metacyc_pathway_name glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; superpathway of N-acetylneuraminate degradation;; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; Calvin-Benson-Bassham cycle;; glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; gluconeogenesis I;; oxygenic photosynthesis;; glycolysis I (from glucose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;; heterolactic fermentation;;
metacyc_pathway_type GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; Gluconeogenesis;; Photosynthesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;;
pfam_acc PF00162;
pfam_desc Phosphoglycerate kinase;
pfam_id PGK;
pfam_target db:Pfam-A.hmm|PF00162.19 evalue:7e-133 score:442.4 best_domain_score:442.3 name:PGK;
sprot_desc Phosphoglycerate kinase;
sprot_id sp|B8GP44|PGK_THISH;
sprot_target db:uniprot_sprot|sp|B8GP44|PGK_THISH 2 390 evalue:2.7e-139 qcov:99.20 identity:65.20;
20370 22544 CDS
ID metaerg.pl|10427
allgo_ids GO:0009279; GO:0016021; GO:0015091; GO:0005506; GO:0038023; GO:0055072; GO:0006826; GO:0015891;
allko_ids K16091;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__BRH-c0;s__BRH-c0 sp000961645;
genomedb_acc GCA_000961645.1;
genomedb_target db:genomedb|GCA_000961645.1|KJS08540.1 52 724 evalue:3.4e-274 qcov:93.00 identity:69.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF07715; PF00593;
pfam_desc TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:1.1e-19 score:70.2 best_domain_score:69.3 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:2.8e-48 score:165.2 best_domain_score:164.7 name:TonB_dep_Rec;
sprot_desc Fe(3+) dicitrate transport protein FecA;
sprot_id sp|P13036|FECA_ECOLI;
sprot_target db:uniprot_sprot|sp|P13036|FECA_ECOLI 66 715 evalue:1.8e-40 qcov:89.80 identity:24.30;
tigrfam_acc TIGR01783;
tigrfam_desc TonB-dependent siderophore receptor;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TonB-siderophor;
tigrfam_sub1role Porins;
tigrfam_target db:TIGRFAMs.hmm|TIGR01783 evalue:6.6e-69 score:232.3 best_domain_score:231.9 name:TIGR01783;
23673 22738 CDS
ID metaerg.pl|10428
allec_ids 3.3.2.10;
allgo_ids GO:0018742; GO:0042803; GO:0009636;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR31050.1 3 311 evalue:9.0e-131 qcov:99.40 identity:72.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:9.7e-28 score:96.7 best_domain_score:94.5 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:1.3e-16 score:61.1 best_domain_score:60.7 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:3.2e-17 score:61.8 best_domain_score:59.2 name:Hydrolase_4;
sprot_desc Epoxide hydrolase A;
sprot_id sp|I6YGS0|EPHA_MYCTU;
sprot_target db:uniprot_sprot|sp|I6YGS0|EPHA_MYCTU 1 309 evalue:3.8e-67 qcov:99.40 identity:45.00;
24610 23909 CDS
ID metaerg.pl|10429
genomedb_OC d__Bacteria;p__Firmicutes_G;c__Limnochordia;o__DTU080;f__DTU080;g__DTU080;s__DTU080 sp001513395;
genomedb_acc GCA_001513395.1;
genomedb_target db:genomedb|GCA_001513395.1|LFTP01000264.1_3 4 191 evalue:4.7e-68 qcov:80.70 identity:64.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF01202;
pfam_desc Shikimate kinase;
pfam_id SKI;
pfam_target db:Pfam-A.hmm|PF01202.22 evalue:3.9e-05 score:23.1 best_domain_score:18.4 name:SKI;
25804 24776 CDS
ID metaerg.pl|10430
allgo_ids GO:0003824;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales;f__Rhodospirillaceae;g__Caenispirillum;s__Caenispirillum salinarum;
genomedb_acc GCF_000315795.1;
genomedb_target db:genomedb|GCF_000315795.1|WP_009542671.1 1 333 evalue:1.2e-133 qcov:97.40 identity:70.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF01557; PF18288;
pfam_desc Fumarylacetoacetate (FAA) hydrolase family; Fumarylacetoacetase N-terminal domain 2;
pfam_id FAA_hydrolase; FAA_hydro_N_2;
pfam_target db:Pfam-A.hmm|PF01557.18 evalue:2.2e-35 score:121.5 best_domain_score:121.1 name:FAA_hydrolase; db:Pfam-A.hmm|PF18288.1 evalue:2.9e-27 score:94.1 best_domain_score:93.5 name:FAA_hydro_N_2;
26000 26458 CDS
ID metaerg.pl|10431
allgo_ids GO:0043565; GO:0003700;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000030.1_33 1 151 evalue:2.7e-56 qcov:99.30 identity:74.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF01037; PF13412; PF13404;
pfam_desc Lrp/AsnC ligand binding domain; Winged helix-turn-helix DNA-binding; AsnC-type helix-turn-helix domain;
pfam_id AsnC_trans_reg; HTH_24; HTH_AsnC-type;
pfam_target db:Pfam-A.hmm|PF01037.21 evalue:3.6e-19 score:67.7 best_domain_score:67.1 name:AsnC_trans_reg; db:Pfam-A.hmm|PF13412.6 evalue:1e-16 score:59.4 best_domain_score:58.5 name:HTH_24; db:Pfam-A.hmm|PF13404.6 evalue:1.5e-14 score:52.7 best_domain_score:51.7 name:HTH_AsnC-type;
sprot_desc Bkd operon transcriptional regulator;
sprot_id sp|P42179|BKDR_PSEPU;
sprot_target db:uniprot_sprot|sp|P42179|BKDR_PSEPU 4 152 evalue:3.6e-23 qcov:98.00 identity:37.60;
26584 27243 CDS
ID metaerg.pl|10432
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Kiloniellales;f__Fodinicurvataceae;g__Tistlia;s__Tistlia consotensis;
genomedb_acc GCF_900177295.1;
genomedb_target db:genomedb|GCF_900177295.1|WP_085124291.1 1 214 evalue:1.3e-54 qcov:97.70 identity:53.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF14864; PF01638; PF02036;
pfam_desc Alkyl sulfatase C-terminal; HxlR-like helix-turn-helix; SCP-2 sterol transfer family;
pfam_id Alkyl_sulf_C; HxlR; SCP2;
pfam_target db:Pfam-A.hmm|PF14864.6 evalue:2.3e-07 score:30.4 best_domain_score:29.7 name:Alkyl_sulf_C; db:Pfam-A.hmm|PF01638.17 evalue:1.1e-20 score:72.5 best_domain_score:71.6 name:HxlR; db:Pfam-A.hmm|PF02036.17 evalue:0.0001 score:22.0 best_domain_score:21.4 name:SCP2;
27240 27707 CDS
ID metaerg.pl|10433
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Kordiimonadaceae;g__GCA-2401685;s__GCA-2401685 sp002401685;
genomedb_acc GCA_002401685.1;
genomedb_target db:genomedb|GCA_002401685.1|PCI61367.1 13 155 evalue:8.7e-34 qcov:92.30 identity:53.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
28357 27713 CDS
ID metaerg.pl|10434
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Aquisalimonadaceae;g__Aquisalimonas;s__Aquisalimonas asiatica;
genomedb_acc GCF_900110585.1;
genomedb_target db:genomedb|GCF_900110585.1|WP_091639403.1 11 206 evalue:1.6e-49 qcov:91.60 identity:49.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
tm_num 6;
28357 27713 transmembrane_helix
ID metaerg.pl|10435
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology i27749-27808o27821-27874i27911-27979o28022-28090i28109-28162o28220-28288i;
28757 29197 CDS
ID metaerg.pl|10436
allgo_ids GO:0016787;
allko_ids K13522; K03574; K01515; K08310;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000022.1_8 3 143 evalue:3.0e-52 qcov:96.60 identity:67.40;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:2.9e-16 score:59.0 best_domain_score:58.6 name:NUDIX;
29495 30826 CDS
ID metaerg.pl|10437
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725026.1 65 424 evalue:1.9e-126 qcov:81.30 identity:61.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
sp YES;
29495 29605 signal_peptide
ID metaerg.pl|10438
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
31294 30836 CDS
ID metaerg.pl|10439
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalobacterales;f__Thiohalobacteraceae;g__Thiohalobacter;s__Thiohalobacter sp002699185;
genomedb_acc GCA_002699185.1;
genomedb_target db:genomedb|GCA_002699185.1|MAT65907.1 1 152 evalue:6.3e-29 qcov:100.00 identity:44.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
31605 32807 CDS
ID metaerg.pl|10440
allec_ids 2.7.6.1;
allgo_ids GO:0009116; GO:0005737; GO:0005524; GO:0016301; GO:0000287; GO:0004749; GO:0006015; GO:0009165; GO:0009156;
allko_ids K00948;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000026.1_4 4 397 evalue:6.0e-188 qcov:98.50 identity:82.70;
kegg_pathway_id 00030; 00230;
kegg_pathway_name Pentose phosphate pathway; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id PRPP-PWY; PWY0-662; PWY-6404;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; PRPP biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Super-Pathways;; Sugar-Phosphate-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF00156; PF13793;
pfam_desc Phosphoribosyl transferase domain; N-terminal domain of ribose phosphate pyrophosphokinase;
pfam_id Pribosyltran; Pribosyltran_N;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:6.2e-10 score:38.0 best_domain_score:34.6 name:Pribosyltran; db:Pfam-A.hmm|PF13793.6 evalue:7.5e-11 score:41.2 best_domain_score:36.5 name:Pribosyltran_N;
sprot_desc Ribose-phosphate pyrophosphokinase;
sprot_id sp|Q8Y2E1|KPRS_RALSO;
sprot_target db:uniprot_sprot|sp|Q8Y2E1|KPRS_RALSO 51 342 evalue:3.3e-15 qcov:73.00 identity:26.40;
33009 34865 CDS
ID metaerg.pl|10441
allec_ids 4.2.1.12;
allgo_ids GO:0003824; GO:0005829; GO:0051539; GO:0046872; GO:0004456; GO:0019521; GO:0009255;
allko_ids K01690;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__SZUA-272;s__SZUA-272 sp003235325;
genomedb_acc GCA_003235325.1;
genomedb_target db:genomedb|GCA_003235325.1|QJWQ01000155.1_40 6 599 evalue:5.2e-231 qcov:96.10 identity:67.60;
kegg_pathway_id 00030;
kegg_pathway_name Pentose phosphate pathway;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id GLYCOLYSIS-E-D; ENTNER-DOUDOROFF-PWY;
metacyc_pathway_name superpathway of glycolysis and the Entner-Doudoroff pathway;; Entner-Doudoroff shunt;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Entner-Duodoroff-Pathways;;
pfam_acc PF00920;
pfam_desc Dehydratase family;
pfam_id ILVD_EDD;
pfam_target db:Pfam-A.hmm|PF00920.21 evalue:1.6e-154 score:514.6 best_domain_score:514.3 name:ILVD_EDD;
sprot_desc Phosphogluconate dehydratase;
sprot_id sp|P31961|EDD_PSEAE;
sprot_target db:uniprot_sprot|sp|P31961|EDD_PSEAE 3 597 evalue:2.7e-202 qcov:96.30 identity:61.40;
tigrfam_acc TIGR01196;
tigrfam_desc phosphogluconate dehydratase;
tigrfam_mainrole Energy metabolism;
tigrfam_name edd;
tigrfam_sub1role Entner-Doudoroff;
tigrfam_target db:TIGRFAMs.hmm|TIGR01196 evalue:5.7e-272 score:902.5 best_domain_score:902.3 name:TIGR01196;
34852 35475 CDS
ID metaerg.pl|10442
allec_ids 4.1.2.14; 4.1.2.14 4.1.3.16;
allgo_ids GO:0016829; GO:0008675; GO:0043725;
allko_ids K01625;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__41T-STBD-0c-01a;s__41T-STBD-0c-01a sp002009425;
genomedb_acc GCF_002009425.1;
genomedb_target db:genomedb|GCF_002009425.1|WP_078117972.1 1 203 evalue:5.9e-54 qcov:98.10 identity:52.70;
kegg_pathway_id 00040; 00030; 00330;
kegg_pathway_name Pentose and glucuronate interconversions; Pentose phosphate pathway; Arginine and proline metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id GLYCOLYSIS-E-D; ENTNER-DOUDOROFF-PWY; PWY-6516; PWY-2221; PWY-6507;
metacyc_pathway_name superpathway of glycolysis and the Entner-Doudoroff pathway;; Entner-Doudoroff shunt;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; Entner-Doudoroff pathway III (semi-phosphorylative);; 4-deoxy-L-threo-hex-4-enopyranuronate degradation;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Entner-Duodoroff-Pathways;; Sugar-Derivatives; Super-Pathways;; Entner-Duodoroff-Pathways;; Sugar-Derivatives;;
pfam_acc PF01081;
pfam_desc KDPG and KHG aldolase;
pfam_id Aldolase;
pfam_target db:Pfam-A.hmm|PF01081.19 evalue:7.2e-67 score:223.8 best_domain_score:223.7 name:Aldolase;
sprot_desc 2-dehydro-3-deoxy-phosphogluconate aldolase;
sprot_id sp|O68283|ALKD_PSEAE;
sprot_target db:uniprot_sprot|sp|O68283|ALKD_PSEAE 4 204 evalue:3.4e-48 qcov:97.10 identity:50.20;
tigrfam_acc TIGR01182;
tigrfam_desc 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name eda;
tigrfam_sub1role Entner-Doudoroff;
tigrfam_target db:TIGRFAMs.hmm|TIGR01182 evalue:5.2e-70 score:234.1 best_domain_score:233.9 name:TIGR01182;
35976 35626 CDS
ID metaerg.pl|10443
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp001280065;
genomedb_acc GCF_001280065.1;
genomedb_target db:genomedb|GCF_001280065.1|WP_053667925.1 5 115 evalue:3.8e-34 qcov:95.70 identity:64.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF11338;
pfam_desc Protein of unknown function (DUF3140);
pfam_id DUF3140;
pfam_target db:Pfam-A.hmm|PF11338.8 evalue:1.1e-36 score:124.4 best_domain_score:124.2 name:DUF3140;
36347 36631 CDS
ID metaerg.pl|10444
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Mesorhizobium;s__Mesorhizobium sp000427725;
genomedb_acc GCF_000427725.1;
genomedb_target db:genomedb|GCF_000427725.1|WP_027164421.1 4 94 evalue:7.1e-15 qcov:96.80 identity:54.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
36923 37168 CDS
ID metaerg.pl|10445
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
37212 38822 CDS
ID metaerg.pl|10446
allgo_ids GO:0016051; GO:0042597; GO:0030288; GO:0030246; GO:0003824; GO:0051274; GO:0009312;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__NRL2;f__NRL2;g__NRL2;s__NRL2 sp002798435;
genomedb_acc GCA_002798435.1;
genomedb_target db:genomedb|GCA_002798435.1|PJK30333.1 14 536 evalue:2.2e-137 qcov:97.60 identity:50.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF04349;
pfam_desc Periplasmic glucan biosynthesis protein, MdoG;
pfam_id MdoG;
pfam_target db:Pfam-A.hmm|PF04349.12 evalue:4.7e-161 score:536.2 best_domain_score:535.4 name:MdoG;
sp YES;
sprot_desc Glucans biosynthesis protein G 2;
sprot_id sp|Q8EDL2|OPGG2_SHEON;
sprot_target db:uniprot_sprot|sp|Q8EDL2|OPGG2_SHEON 11 533 evalue:5.6e-119 qcov:97.60 identity:43.80;
37212 37289 signal_peptide
ID metaerg.pl|10447
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
38827 40980 CDS
ID metaerg.pl|10448
allec_ids 2.4.1.-;
allgo_ids GO:0016757; GO:0016021; GO:0005886; GO:0016758; GO:0009250;
allko_ids K03669;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Kordiimonadaceae;g__Kordiimonas;s__Kordiimonas gwangyangensis;
genomedb_acc GCF_000375545.1;
genomedb_target db:genomedb|GCF_000375545.1|WP_020400380.1 5 683 evalue:2.0e-189 qcov:94.70 identity:51.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id PWY-5793; PWY-5397; PWY-6404; PWY-5380; PWY-2901; PWY-5313; PWY-881; PWY-5268; PWY-83; PWY-5379; PWY-5784; ECASYN-PWY; PWY-5284; PWY-5272; PWY-5307; PWY-5399; PWY-5405; PWY-5342; PWY-5343; PWY-2881; PWY-6297; PWY-5338; PWY-5400; PWY-5672; PWY-5797; PWY-2021; PWY-5926; PWY-5339; PWY-5398; PWY-5774; PWY-5286; PWY-5759; PWY-5756; PWY-5160; PWY-5139; PWY-5161; PWY-5800; PWY-5666; PWY-6397; PWY-4421;
metacyc_pathway_name maysin biosynthesis;; crocetin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; A series fagopyritols biosynthesis;; cytokinins 9-N-glucoside biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; trehalose biosynthesis II;; salvianin biosynthesis;; monolignol glucosides biosynthesis;; B series fagopyritols biosynthesis;; indole-3-acetate inactivation VIII;; enterobacterial common antigen biosynthesis;; shisonin biosynthesis;; abscisic acid degradation by glucosylation;; gentiodelphin biosynthesis;; betacyanin biosynthesis;; superpathway of betalain biosynthesis;; ajugose biosynthesis I (galactinol-dependent);; ajugose biosynthesis II (galactinol-independent);; cytokinins 7-N-glucoside biosynthesis;; tuberonate glucoside biosynthesis;; galactosylcyclitol biosynthesis;; amaranthin biosynthesis;; ginsenosides biosynthesis;; indole-3-acetate inactivation VI;; indole-3-acetate inactivation IV;; afrormosin conjugates interconversion;; chalcone 2'-O-glucoside biosynthesis;; crocetin esters biosynthesis;; saponin biosynthesis IV;; anthocyanidin sophoroside metabolism;; saponin biosynthesis III;; saponin biosynthesis II;; rose anthocyanin biosynthesis I (via cyanidin 5-O-β-D-glucoside);; pelargonidin conjugates biosynthesis;; 6'-deoxychalcone metabolism;; xylan biosynthesis;; α-solanine/α-chaconine biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; curcumin glucoside biosynthesis;;
metacyc_pathway_type FLAVONE-SYN;; APOCAROTENOID-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; CYCLITOLS-DEG; SUGAR-DERIVS;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; ANTHOCYANIN-SYN; Super-Pathways;; Trehalose-biosynthesis;; ANTHOCYANIN-SYN;; LIGNIN-SYN; Metabolic-Clusters;; CYCLITOLS-DEG; SUGAR-DERIVS;; Indole-3-Acetate-Inactivation;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; Abscisic-Acid-Degradation; Interconversion;; ANTHOCYANIN-SYN;; BETALAIN-ALKALOIDS;; BETALAIN-ALKALOIDS; Super-Pathways;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Inactivation;; Cyclitols-Biosynthesis;; BETALAIN-ALKALOIDS;; TRITERPENOID-SYN;; Indole-3-Acetate-Inactivation;; Indole-3-Acetate-Inactivation;; ISOFLAVONOID-SYN; Interconversion;; CHALCONE-SYN;; APOCAROTENOID-SYN;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN; Metabolic-Clusters;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN;; ANTHOCYANIN-SYN;; CHALCONE-SYN;; SECONDARY-CELL-WALL;; ALKALOIDS-SYN;; Cell-Wall-Biosynthesis;; PHENYLPROPANOID-SYN; POLYKETIDE-SYN;;
pfam_acc PF00535; PF13506; PF13632;
pfam_desc Glycosyl transferase family 2; Glycosyl transferase family 21; Glycosyl transferase family group 2;
pfam_id Glycos_transf_2; Glyco_transf_21; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:6.4e-07 score:28.6 best_domain_score:27.9 name:Glycos_transf_2; db:Pfam-A.hmm|PF13506.6 evalue:1.8e-08 score:33.3 best_domain_score:32.4 name:Glyco_transf_21; db:Pfam-A.hmm|PF13632.6 evalue:4.3e-11 score:42.3 best_domain_score:42.3 name:Glyco_trans_2_3;
sprot_desc Glucans biosynthesis glucosyltransferase H;
sprot_id sp|A5F1Q0|OPGH_VIBC3;
sprot_target db:uniprot_sprot|sp|A5F1Q0|OPGH_VIBC3 6 689 evalue:1.4e-128 qcov:95.40 identity:41.10;
tm_num 7;
38827 40980 transmembrane_helix
ID metaerg.pl|10449
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology i38935-39003o39061-39129i40009-40077o40153-40221i40282-40350o40408-40476i40489-40557o;
42333 41353 CDS
ID metaerg.pl|10450
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_C;s__Halomonas_C lutea;
genomedb_acc GCF_000378505.1;
genomedb_target db:genomedb|GCF_000378505.1|WP_019020118.1 13 323 evalue:3.3e-128 qcov:95.40 identity:68.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:3.5e-09 score:36.7 best_domain_score:36.0 name:Metallophos;
43647 42493 CDS
ID metaerg.pl|10451
genomedb_OC d__Bacteria;p__Desulfuromonadota;c__Desulfuromonadia;o__Desulfuromonadales;f__Geoalkalibacteraceae;g__Geoalkalibacter;s__Geoalkalibacter ferrihydriticus;
genomedb_acc GCF_000820505.1;
genomedb_target db:genomedb|GCF_000820505.1|WP_082048034.1 3 382 evalue:5.7e-135 qcov:99.00 identity:65.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF03372;
pfam_desc Endonuclease/Exonuclease/phosphatase family;
pfam_id Exo_endo_phos;
pfam_target db:Pfam-A.hmm|PF03372.23 evalue:1.4e-18 score:66.5 best_domain_score:66.0 name:Exo_endo_phos;
tm_num 3;
43647 42493 transmembrane_helix
ID metaerg.pl|10452
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology i42511-42579o42607-42675i42694-42762o;
44989 44075 CDS
ID metaerg.pl|10453
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E fuscovaginae_B;
genomedb_acc GCF_001293465.1;
genomedb_target db:genomedb|GCF_001293465.1|WP_054062027.1 24 303 evalue:2.5e-61 qcov:92.10 identity:51.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
tm_num 4;
44989 44075 transmembrane_helix
ID metaerg.pl|10454
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology o44204-44272i44291-44359o44453-44521i44897-44965o;
47258 45291 CDS
ID metaerg.pl|10455
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas daqiaonensis;
genomedb_acc GCF_900109725.1;
genomedb_target db:genomedb|GCF_900109725.1|WP_089712034.1 1 652 evalue:2.1e-291 qcov:99.50 identity:76.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
47673 48428 CDS
ID metaerg.pl|10456
allec_ids 3.1.3.48;
allgo_ids GO:0004725;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2168;s__UBA2168 sp002327525;
genomedb_acc GCA_002327525.1;
genomedb_target db:genomedb|GCA_002327525.1|DCWG01000077.1_2 1 251 evalue:4.9e-111 qcov:100.00 identity:75.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF13350;
pfam_desc Tyrosine phosphatase family;
pfam_id Y_phosphatase3;
pfam_target db:Pfam-A.hmm|PF13350.6 evalue:2.9e-56 score:190.3 best_domain_score:190.1 name:Y_phosphatase3;
sprot_desc Tyrosine-protein phosphatase;
sprot_id sp|Q05918|IPHP_NOSCO;
sprot_target db:uniprot_sprot|sp|Q05918|IPHP_NOSCO 25 245 evalue:2.5e-13 qcov:88.00 identity:26.70;
49188 48502 CDS
ID metaerg.pl|10457
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
tm_num 4;
49188 48502 transmembrane_helix
ID metaerg.pl|10458
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology o48586-48654i48784-48852o48880-48933i48994-49062o;
49271 50053 CDS
ID metaerg.pl|10459
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
tm_num 2;
49271 50053 transmembrane_helix
ID metaerg.pl|10460
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology o49340-49408i49442-49510o;
51086 50106 CDS
ID metaerg.pl|10461
allgo_ids GO:0016020; GO:0016021; GO:0005887; GO:0005886;
allko_ids K05786;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000058.1_16 33 316 evalue:2.0e-72 qcov:87.10 identity:54.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:4e-14 score:52.2 best_domain_score:46.3 name:EamA;
sprot_desc Uncharacterized transporter VC_0195;
sprot_id sp|Q9KVF1|Y195_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KVF1|Y195_VIBCH 33 320 evalue:2.3e-59 qcov:88.30 identity:45.30;
tigrfam_acc TIGR00688;
tigrfam_desc protein RarD;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name rarD;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR00688 evalue:3.4e-62 score:209.4 best_domain_score:208.9 name:TIGR00688;
tm_num 10;
51086 50106 transmembrane_helix
ID metaerg.pl|10462
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology i50196-50264o50307-50375i50394-50462o50472-50540i50559-50612o50625-50678i50712-50780o50823-50876i50889-50957o50985-51038i;
51294 52256 CDS
ID metaerg.pl|10463
allec_ids 4.3.1.16;
allgo_ids GO:0005524; GO:0008721; GO:0003941; GO:0000287; GO:0030170; GO:0030378; GO:0030848; GO:0018114; GO:0042219; GO:0070179; GO:0006563; GO:0042866;
allko_ids K01733; K01754; K22589;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Sulfuricellaceae;g__UBA9220;s__UBA9220 sp003519965;
genomedb_acc GCA_003519965.1;
genomedb_target db:genomedb|GCA_003519965.1|HCA26085.1 1 316 evalue:1.5e-128 qcov:98.80 identity:74.10;
kegg_pathway_id 00290; 00750; 00260;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Vitamin B6 metabolism; Glycine, serine and threonine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:6.7e-65 score:218.6 best_domain_score:218.3 name:PALP;
sprot_desc L-threo-3-hydroxyaspartate ammonia-lyase;
sprot_id sp|P36007|LTHAD_YEAST;
sprot_target db:uniprot_sprot|sp|P36007|LTHAD_YEAST 22 318 evalue:3.1e-32 qcov:92.80 identity:30.50;
52367 52789 CDS
ID metaerg.pl|10464
allgo_ids GO:0005739; GO:0050897; GO:0045454; GO:0009651;
allko_ids K00974; K00970; K02806; K05847; K00641; K00088; K00031; K11527; K02000; K01697;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003228415;
genomedb_acc GCA_003228415.1;
genomedb_target db:genomedb|GCA_003228415.1|QIDL01000129.1_4 1 130 evalue:9.6e-40 qcov:92.90 identity:67.70;
kegg_pathway_id 00450; 02010; 02060; 00230; 00260; 00020; 00271; 00480; 00920; 00983; 00720;
kegg_pathway_name Selenoamino acid metabolism; ABC transporters - General; Phosphotransferase system (PTS); Purine metabolism; Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle); Methionine metabolism; Glutathione metabolism; Sulfur metabolism; Drug metabolism - other enzymes; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00571;
pfam_desc CBS domain;
pfam_id CBS;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:6.4e-24 score:83.4 best_domain_score:56.1 name:CBS;
sprot_desc CBS domain-containing protein CBSX3, mitochondrial;
sprot_id sp|Q9LEV3|CBSX3_ARATH;
sprot_target db:uniprot_sprot|sp|Q9LEV3|CBSX3_ARATH 3 128 evalue:3.2e-18 qcov:90.00 identity:35.60;
54184 52925 CDS
ID metaerg.pl|10465
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005739; GO:0050660; GO:0016787;
allko_ids K06446; K00248; K00253; K00252; K14448; K00249; K11731; K11729;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Parvibaculaceae;g__Parvibaculum;s__Parvibaculum sp002480495;
genomedb_acc GCA_002480495.1;
genomedb_target db:genomedb|GCA_002480495.1|DLCG01000017.1_132 8 419 evalue:2.0e-210 qcov:98.30 identity:87.90;
kegg_pathway_id 00930; 00632; 00380; 00310; 00280; 00071; 00410; 00640; 00650;
kegg_pathway_name Caprolactam degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Fatty acid metabolism; beta-Alanine metabolism; Propanoate metabolism; Butanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id CARNMET-PWY; PWY-6544; PWY-699; PWY-2582;
metacyc_pathway_name L-carnitine degradation I;; superpathway of C28 brassinosteroid biosynthesis;; brassinosteroid biosynthesis I;; brassinosteroid biosynthesis II;;
metacyc_pathway_type CARN-DEG;; Super-Pathways;; Brassinosteroid-Biosynthesis;; Brassinosteroid-Biosynthesis;;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:2.2e-30 score:105.0 best_domain_score:104.4 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:4.6e-06 score:26.2 best_domain_score:25.4 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:1.2e-18 score:66.3 best_domain_score:65.2 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:7.8e-14 score:51.5 best_domain_score:50.7 name:Acyl-CoA_dh_N;
sprot_desc Acyl-CoA dehydrogenase family member 10;
sprot_id sp|Q8K370|ACD10_MOUSE;
sprot_target db:uniprot_sprot|sp|Q8K370|ACD10_MOUSE 24 414 evalue:3.1e-109 qcov:93.30 identity:52.50;
54331 55167 CDS
ID metaerg.pl|10466
allec_ids 1.-.-.-;
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR31457.1 1 278 evalue:5.1e-109 qcov:100.00 identity:71.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id PWY-5826; PWY-2821; PWY-4302; PWY-5271; PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987;
metacyc_pathway_name hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:1.8e-44 score:150.8 best_domain_score:150.5 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:6.4e-29 score:100.4 best_domain_score:100.1 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:3.9e-06 score:26.1 best_domain_score:25.5 name:KR;
sprot_desc Uncharacterized oxidoreductase SSP1627;
sprot_id sp|Q49WS9|Y1627_STAS1;
sprot_target db:uniprot_sprot|sp|Q49WS9|Y1627_STAS1 3 275 evalue:8.9e-28 qcov:98.20 identity:31.80;
55646 55170 CDS
ID metaerg.pl|10467
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
sp YES;
55170 55256 lipoprotein_signal_peptide
ID metaerg.pl|10468
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
56349 55684 CDS
ID metaerg.pl|10469
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000009.1_85 1 216 evalue:6.7e-64 qcov:97.70 identity:57.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF08044; PF09922;
pfam_desc Domain of unknown function (DUF1707); Cell wall-active antibiotics response 4TMS YvqF;
pfam_id DUF1707; DUF2154;
pfam_target db:Pfam-A.hmm|PF08044.11 evalue:3.1e-10 score:39.2 best_domain_score:39.2 name:DUF1707; db:Pfam-A.hmm|PF09922.9 evalue:6.3e-09 score:34.9 best_domain_score:32.9 name:DUF2154;
56928 56584 CDS
ID metaerg.pl|10470
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_C;s__Halomonas_C ilicicola;
genomedb_acc GCF_900128925.1;
genomedb_target db:genomedb|GCF_900128925.1|WP_072822161.1 11 109 evalue:6.6e-15 qcov:86.80 identity:42.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
sp YES;
56584 56646 lipoprotein_signal_peptide
ID metaerg.pl|10471
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
57152 57568 CDS
ID metaerg.pl|10472
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_C;s__Halomonas_C muralis;
genomedb_acc GCF_900102945.1;
genomedb_target db:genomedb|GCF_900102945.1|WP_089730838.1 1 135 evalue:1.8e-35 qcov:97.80 identity:53.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF06983; PF00903;
pfam_desc 3-demethylubiquinone-9 3-methyltransferase; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id 3-dmu-9_3-mt; Glyoxalase;
pfam_target db:Pfam-A.hmm|PF06983.13 evalue:4.1e-13 score:49.1 best_domain_score:48.7 name:3-dmu-9_3-mt; db:Pfam-A.hmm|PF00903.25 evalue:0.00013 score:21.4 best_domain_score:20.7 name:Glyoxalase;
57687 58070 CDS
ID metaerg.pl|10473
allgo_ids GO:0016021; GO:0005886; GO:0004602; GO:0004364;
allko_ids K00799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000306.1_8 1 126 evalue:9.6e-31 qcov:99.20 identity:58.70;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF01124;
pfam_desc MAPEG family;
pfam_id MAPEG;
pfam_target db:Pfam-A.hmm|PF01124.18 evalue:3.8e-15 score:55.2 best_domain_score:54.9 name:MAPEG;
sprot_desc hypothetical protein;
sprot_id sp|P73795|Y1147_SYNY3;
sprot_target db:uniprot_sprot|sp|P73795|Y1147_SYNY3 6 123 evalue:6.1e-16 qcov:92.90 identity:43.20;
tm_num 3;
57687 58070 transmembrane_helix
ID metaerg.pl|10474
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology o57696-57755i57852-57920o57996-58064i;
58260 59264 CDS
ID metaerg.pl|10475
allec_ids 1.-.-.-;
allgo_ids GO:0055114; GO:0005829; GO:0004022; GO:0006066; GO:0006091;
allko_ids K13953; K00001;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000062.1_24 1 334 evalue:2.3e-148 qcov:100.00 identity:79.60;
kegg_pathway_id 00010; 00624; 00641; 00120; 00350; 00071;
kegg_pathway_name Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; 3-Chloroacrylic acid degradation; Bile acid biosynthesis; Tyrosine metabolism; Fatty acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-5469; PWY-5987; PWY-5479; PWY-5826; PWY-2821; PWY-4302; PWY-5271;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;;
pfam_acc PF08240; PF00107; PF13602;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N; ADH_zinc_N_2;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:3.2e-07 score:29.4 best_domain_score:28.4 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:1.7e-29 score:101.6 best_domain_score:100.7 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:1.6e-19 score:70.5 best_domain_score:69.7 name:ADH_zinc_N_2;
sprot_desc Zinc-type alcohol dehydrogenase-like protein C1773.06c;
sprot_id sp|O94564|YGD6_SCHPO;
sprot_target db:uniprot_sprot|sp|O94564|YGD6_SCHPO 28 334 evalue:1.4e-64 qcov:91.90 identity:46.40;
59613 60416 CDS
ID metaerg.pl|10476
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Hydrogenophaga;s__Hydrogenophaga flava;
genomedb_acc GCF_001571145.1;
genomedb_target db:genomedb|GCF_001571145.1|WP_066260648.1 3 265 evalue:5.9e-38 qcov:98.50 identity:43.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF03372;
pfam_desc Endonuclease/Exonuclease/phosphatase family;
pfam_id Exo_endo_phos;
pfam_target db:Pfam-A.hmm|PF03372.23 evalue:2.2e-11 score:43.0 best_domain_score:42.5 name:Exo_endo_phos;
62475 60385 CDS
ID metaerg.pl|10477
allec_ids 3.6.4.12;
allgo_ids GO:0005524; GO:0005737; GO:0004003; GO:0003677; GO:0006268;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__GCA-2707785;s__GCA-2707785 sp002707785;
genomedb_acc GCA_002707785.1;
genomedb_target db:genomedb|GCA_002707785.1|MAZ87601.1 14 696 evalue:4.3e-266 qcov:98.10 identity:66.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF13245; PF13604; PF00580; PF13361; PF13538;
pfam_desc AAA domain; AAA domain; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain; UvrD-like helicase C-terminal domain;
pfam_id AAA_19; AAA_30; UvrD-helicase; UvrD_C; UvrD_C_2;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:3.3e-33 score:114.3 best_domain_score:112.8 name:AAA_19; db:Pfam-A.hmm|PF13604.6 evalue:2.8e-08 score:32.9 best_domain_score:25.1 name:AAA_30; db:Pfam-A.hmm|PF00580.21 evalue:6.5e-57 score:192.7 best_domain_score:96.6 name:UvrD-helicase; db:Pfam-A.hmm|PF13361.6 evalue:8.6e-39 score:133.1 best_domain_score:71.5 name:UvrD_C; db:Pfam-A.hmm|PF13538.6 evalue:4.1e-10 score:38.6 best_domain_score:36.7 name:UvrD_C_2;
sprot_desc ATP-dependent DNA helicase PcrA;
sprot_id sp|P56255|PCRA_GEOSE;
sprot_target db:uniprot_sprot|sp|P56255|PCRA_GEOSE 11 696 evalue:2.1e-62 qcov:98.60 identity:28.10;
62973 62659 CDS
ID metaerg.pl|10478
allgo_ids GO:0003700; GO:0006355;
casgene_acc COG0640_csa3_CAS-I-A;
casgene_name csa3;
casgene_target db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:3.2e-10 score:39.6 best_domain_score:39.6 name:csa3;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Parvibaculales;f__Parvibaculaceae;g__Parvibaculum;s__Parvibaculum sp002842875;
genomedb_acc GCA_002842875.1;
genomedb_target db:genomedb|GCA_002842875.1|PKP76537.1 7 102 evalue:3.3e-29 qcov:92.30 identity:71.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF12840; PF01022;
pfam_desc Helix-turn-helix domain; Bacterial regulatory protein, arsR family;
pfam_id HTH_20; HTH_5;
pfam_target db:Pfam-A.hmm|PF12840.7 evalue:1.9e-16 score:59.1 best_domain_score:58.7 name:HTH_20; db:Pfam-A.hmm|PF01022.20 evalue:3.5e-08 score:32.4 best_domain_score:31.8 name:HTH_5;
64271 62970 CDS
ID metaerg.pl|10479
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Caulobacter;s__Caulobacter sp000019145;
genomedb_acc GCF_000019145.1;
genomedb_target db:genomedb|GCF_000019145.1|WP_012286340.1 11 402 evalue:1.5e-62 qcov:90.50 identity:41.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
64545 67283 CDS
ID metaerg.pl|10480
allec_ids 2.3.1.-;
allgo_ids GO:0048037; GO:0005524; GO:0046872; GO:0061733; GO:0052858; GO:0018393; GO:0051289; GO:0032462; GO:0009408; GO:0006979;
allko_ids K01895; K01905; K09181;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000055.1_36 1 904 evalue:0.0e+00 qcov:99.10 identity:76.20;
kegg_pathway_id 00620; 00720; 00010; 00640;
kegg_pathway_name Pyruvate metabolism; Reductive carboxylate cycle (CO2 fixation); Glycolysis / Gluconeogenesis; Propanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id PWY-5477; PWY-5437; PWY-5981; PWY-6432; PWY1A0-6325; LPSSYN-PWY; PWY-6113; PWY-6413; PWYG-321; FASYN-INITIAL-PWY; PWY-6312; PWY-6442; PWY-6418; PWY1-3; PWY-6397; KDO-NAGLIPASYN-PWY; BENZCOA-PWY; PWY-5184; PWY-4801; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-6310; PWY-5139; PWY-5080; ECASYN-PWY; PWY-6515; P3-PWY; PWY-6295; PWY-5284; PWY-6438; THREOCAT-PWY; PWY-84; PWY-5140; PWY-5987; PWY-6411; PWY0-881; PWY-5268; PWY-6316; CENTBENZCOA-PWY; PWY-6404; PWY-5313; PWY-5400; PWY-5965; PWY-5209; PWY-5393; PWY-6412; KDO-LIPASYN-PWY; PWY-5307; PWY-6318; PWY-5972; PWY-5405;
metacyc_pathway_name gallotannin biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; curcuminoid biosynthesis;; actinorhodin biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; superpathway of mycolate biosynthesis;; ginsenoside degradation III;; mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; polyhydroxybutanoate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of (Kdo)2-lipid A biosynthesis;; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; aloesone biosynthesis I;; sophorolipid biosynthesis;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; very long chain fatty acid biosynthesis I;; enterobacterial common antigen biosynthesis;; phloridzin biosynthesis;; gallate degradation III (anaerobic);; ; shisonin biosynthesis;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; resveratrol biosynthesis;; cannabinoid biosynthesis;; sorgoleone biosynthesis;; ginsenoside degradation I;; superpathway of fatty acid biosynthesis I (E. coli);; salvianin biosynthesis;; aromatic polyketides biosynthesis;; benzoyl-CoA degradation II (anaerobic);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; amaranthin biosynthesis;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; raspberry ketone biosynthesis;; ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; gentiodelphin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; stearate biosynthesis I (animals and fungi);; superpathway of betalain biosynthesis;;
metacyc_pathway_type GALLOTANNINS;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOID-DEG;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; Storage-Compounds-Biosynthesis;; Cell-Wall-Biosynthesis;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; POLYKETIDE-SYN;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; FLAVONOID-SYN;; GALLATE-DEG;; ; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Ginsenoside-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Benzoyl-CoA-Degradation;; Cell-Wall-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN; Super-Pathways;; BETALAIN-ALKALOIDS;; Fatty-acid-biosynthesis;; METHANOGENESIS;; POLYKETIDE-SYN;; Ginsenoside-Degradation;; Lipid-Biosynthesis;; ANTHOCYANIN-SYN;; PHENYLALANINE-DEG;; Stearate-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;;
pfam_acc PF00583; PF13302; PF13549; PF02629; PF13380; PF13607;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; ATP-grasp domain; CoA binding domain; CoA binding domain; Succinyl-CoA ligase like flavodoxin domain;
pfam_id Acetyltransf_1; Acetyltransf_3; ATP-grasp_5; CoA_binding; CoA_binding_2; Succ_CoA_lig;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:2e-08 score:33.7 best_domain_score:32.6 name:Acetyltransf_1; db:Pfam-A.hmm|PF13302.7 evalue:2.2e-10 score:40.6 best_domain_score:39.4 name:Acetyltransf_3; db:Pfam-A.hmm|PF13549.6 evalue:1.1e-85 score:285.8 best_domain_score:284.9 name:ATP-grasp_5; db:Pfam-A.hmm|PF02629.19 evalue:5.1e-08 score:32.7 best_domain_score:30.9 name:CoA_binding; db:Pfam-A.hmm|PF13380.6 evalue:1.3e-22 score:79.7 best_domain_score:77.0 name:CoA_binding_2; db:Pfam-A.hmm|PF13607.6 evalue:1e-56 score:189.8 best_domain_score:187.7 name:Succ_CoA_lig;
sprot_desc Peptidyl-lysine N-acetyltransferase PatZ;
sprot_id sp|P76594|LYSAC_ECOLI;
sprot_target db:uniprot_sprot|sp|P76594|LYSAC_ECOLI 1 897 evalue:8.2e-179 qcov:98.40 identity:40.90;
67428 69089 CDS
ID metaerg.pl|10481
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Idiomarina;s__Idiomarina sp001458075;
genomedb_acc GCF_001458075.1;
genomedb_target db:genomedb|GCF_001458075.1|WP_072155641.1 21 553 evalue:2.2e-132 qcov:96.40 identity:47.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF13365;
pfam_desc Trypsin-like peptidase domain;
pfam_id Trypsin_2;
pfam_target db:Pfam-A.hmm|PF13365.6 evalue:7e-15 score:55.5 best_domain_score:54.2 name:Trypsin_2;
sp YES;
67428 67520 signal_peptide
ID metaerg.pl|10482
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
69194 69748 CDS
ID metaerg.pl|10483
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ga0077536;f__Ga0077536;g__Ga0077536;s__Ga0077536 sp001464935;
genomedb_acc GCA_001464935.1;
genomedb_target db:genomedb|GCA_001464935.1|LNEL01000056.1_95 1 163 evalue:2.5e-56 qcov:88.60 identity:67.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF07152;
pfam_desc YaeQ protein;
pfam_id YaeQ;
pfam_target db:Pfam-A.hmm|PF07152.12 evalue:9.8e-71 score:236.1 best_domain_score:236.0 name:YaeQ;
sprot_desc hypothetical protein;
sprot_id sp|P0AA97|YAEQ_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AA97|YAEQ_ECOLI 1 172 evalue:5.5e-42 qcov:93.50 identity:47.10;
69784 70293 CDS
ID metaerg.pl|10484
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Acidiferrobacterales;f__Sulfurifustaceae;g__Sulfurifustis;s__Sulfurifustis variabilis;
genomedb_acc GCF_002355415.1;
genomedb_target db:genomedb|GCF_002355415.1|WP_096459004.1 1 161 evalue:1.3e-67 qcov:95.30 identity:75.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00583; PF13302; PF13508; PF13523;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_3; Acetyltransf_7; Acetyltransf_8;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1e-11 score:44.3 best_domain_score:44.0 name:Acetyltransf_1; db:Pfam-A.hmm|PF13302.7 evalue:1.2e-13 score:51.2 best_domain_score:50.9 name:Acetyltransf_3; db:Pfam-A.hmm|PF13508.7 evalue:3.4e-08 score:33.0 best_domain_score:32.2 name:Acetyltransf_7; db:Pfam-A.hmm|PF13523.6 evalue:3.7e-29 score:100.5 best_domain_score:100.3 name:Acetyltransf_8;
71439 70336 CDS
ID metaerg.pl|10485
allec_ids 1.4.1.1;
allgo_ids GO:0000286; GO:0046872; GO:0000166; GO:0042853;
allko_ids K00325; K00259; K00322; K00323; K00324;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__Bog-1198;s__Bog-1198 sp003132425;
genomedb_acc GCA_003132425.1;
genomedb_target db:genomedb|GCA_003132425.1|PKXS01000086.1_45 1 365 evalue:4.5e-129 qcov:99.50 identity:67.40;
kegg_pathway_id 00760; 00720; 00430;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Reductive carboxylate cycle (CO2 fixation); Taurine and hypotaurine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id PWY1-2;
metacyc_pathway_name L-alanine degradation IV;;
metacyc_pathway_type ALANINE-DEG;;
pfam_acc PF01262; PF05222;
pfam_desc Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain;
pfam_id AlaDh_PNT_C; AlaDh_PNT_N;
pfam_target db:Pfam-A.hmm|PF01262.21 evalue:6.9e-78 score:260.0 best_domain_score:259.7 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF05222.15 evalue:2.1e-47 score:160.1 best_domain_score:159.0 name:AlaDh_PNT_N;
sprot_desc Alanine dehydrogenase;
sprot_id sp|E1V931|DHA_HALED;
sprot_target db:uniprot_sprot|sp|E1V931|DHA_HALED 1 358 evalue:5.0e-119 qcov:97.50 identity:61.20;
tigrfam_acc TIGR00518;
tigrfam_desc alanine dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name alaDH;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00518 evalue:6.9e-148 score:491.6 best_domain_score:491.5 name:TIGR00518;
71512 72054 CDS
ID metaerg.pl|10486
allgo_ids GO:0003700; GO:0006355; GO:0043565;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ga0077536;f__Ga0077536;g__Ga0077536;s__Ga0077536 sp001464935;
genomedb_acc GCA_001464935.1;
genomedb_target db:genomedb|GCA_001464935.1|LNEL01000064.1_147 31 180 evalue:2.8e-44 qcov:83.30 identity:66.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF01037; PF12840; PF13412; PF01022; PF13404;
pfam_desc Lrp/AsnC ligand binding domain; Helix-turn-helix domain; Winged helix-turn-helix DNA-binding; Bacterial regulatory protein, arsR family; AsnC-type helix-turn-helix domain;
pfam_id AsnC_trans_reg; HTH_20; HTH_24; HTH_5; HTH_AsnC-type;
pfam_target db:Pfam-A.hmm|PF01037.21 evalue:2e-25 score:87.8 best_domain_score:87.2 name:AsnC_trans_reg; db:Pfam-A.hmm|PF12840.7 evalue:9e-08 score:31.3 best_domain_score:30.3 name:HTH_20; db:Pfam-A.hmm|PF13412.6 evalue:4.8e-18 score:63.7 best_domain_score:63.1 name:HTH_24; db:Pfam-A.hmm|PF01022.20 evalue:0.00014 score:20.9 best_domain_score:19.7 name:HTH_5; db:Pfam-A.hmm|PF13404.6 evalue:2.5e-18 score:64.9 best_domain_score:64.2 name:HTH_AsnC-type;
sprot_desc Bkd operon transcriptional regulator;
sprot_id sp|P42179|BKDR_PSEPU;
sprot_target db:uniprot_sprot|sp|P42179|BKDR_PSEPU 31 180 evalue:2.8e-30 qcov:83.30 identity:50.70;
72188 72820 CDS
ID metaerg.pl|10487
allgo_ids GO:0003676;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Hydrogenophilaceae;g__Thiobacillus;s__Thiobacillus sp001897675;
genomedb_acc GCA_001897675.1;
genomedb_target db:genomedb|GCA_001897675.1|OJW46016.1 1 204 evalue:3.4e-49 qcov:97.10 identity:50.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00313; PF06961;
pfam_desc 'Cold-shock' DNA-binding domain; Protein of unknown function (DUF1294);
pfam_id CSD; DUF1294;
pfam_target db:Pfam-A.hmm|PF00313.22 evalue:1.3e-11 score:43.5 best_domain_score:42.2 name:CSD; db:Pfam-A.hmm|PF06961.13 evalue:1.5e-21 score:75.6 best_domain_score:74.9 name:DUF1294;
tm_num 3;
72188 72820 transmembrane_helix
ID metaerg.pl|10488
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology i72434-72493o72506-72559i72695-72763o;
72951 73577 CDS
ID metaerg.pl|10489
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Syntrophobacteria;o__Syntrophobacterales;f__Syntrophobacteraceae;g__Desulfacinum;s__Desulfacinum hydrothermale;
genomedb_acc GCF_900176285.1;
genomedb_target db:genomedb|GCF_900176285.1|WP_084057596.1 2 208 evalue:7.2e-68 qcov:99.50 identity:60.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
73764 74828 CDS
ID metaerg.pl|10490
allec_ids 4.1.2.13;
allgo_ids GO:0005975; GO:0008270; GO:0016832; GO:0004332; GO:0006096;
allko_ids K01624;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax_A;s__Alcanivorax_A pacificus;
genomedb_acc GCF_000299335.2;
genomedb_target db:genomedb|GCF_000299335.2|WP_008740112.1 1 351 evalue:2.7e-171 qcov:99.20 identity:85.50;
kegg_pathway_id 00030; 00710; 00051; 00010;
kegg_pathway_name Pentose phosphate pathway; Carbon fixation in photosynthetic organisms; Fructose and mannose metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id PWY-6146; GLYCOLYSIS-E-D; GLYCOLYSIS; GLUCONEO-PWY; PHOTOALL-PWY; P185-PWY; PWY-5484; PWY66-373; P461-PWY; P341-PWY; PWY-6142; CALVIN-PWY; P441-PWY; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5464; ANAGLYCOLYSIS-PWY; PWY-1861;
metacyc_pathway_name Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis I (from glucose 6-phosphate);; gluconeogenesis I;; oxygenic photosynthesis;; formaldehyde assimilation III (dihydroxyacetone cycle);; glycolysis II (from fructose 6-phosphate);; sucrose degradation V (sucrose α-glucosidase);; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis V (Pyrococcus);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; Calvin-Benson-Bassham cycle;; superpathway of N-acetylneuraminate degradation;; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; formaldehyde assimilation II (assimilatory RuMP Cycle);;
metacyc_pathway_type Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis;; Photosynthesis; Super-Pathways;; Formaldehyde-Assimilation;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; CARBOXYLATES-DEG; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Formaldehyde-Assimilation;;
pfam_acc PF01116;
pfam_desc Fructose-bisphosphate aldolase class-II;
pfam_id F_bP_aldolase;
pfam_target db:Pfam-A.hmm|PF01116.20 evalue:4e-93 score:311.2 best_domain_score:311.0 name:F_bP_aldolase;
sprot_desc Fructose-bisphosphate aldolase;
sprot_id sp|O87796|ALF_PSEST;
sprot_target db:uniprot_sprot|sp|O87796|ALF_PSEST 1 353 evalue:1.1e-166 qcov:99.70 identity:83.30;
tigrfam_acc TIGR00167; TIGR01521;
tigrfam_desc ketose-bisphosphate aldolase; fructose-bisphosphate aldolase, class II, Calvin cycle subtype;
tigrfam_mainrole Energy metabolism;
tigrfam_name cbbA; FruBisAldo_II_B;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00167 evalue:1.4e-95 score:319.2 best_domain_score:318.9 name:TIGR00167; db:TIGRFAMs.hmm|TIGR01521 evalue:5.5e-199 score:659.5 best_domain_score:659.4 name:TIGR01521;
74875 75360 CDS
ID metaerg.pl|10491
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Aeromonadaceae;g__Oceanimonas;s__Oceanimonas sp000243075;
genomedb_acc GCF_000243075.1;
genomedb_target db:genomedb|GCF_000243075.1|WP_014292470.1 3 161 evalue:1.6e-59 qcov:98.80 identity:69.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00583; PF13673; PF13420; PF13508;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_4; Acetyltransf_7;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:2e-10 score:40.2 best_domain_score:39.9 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:4.6e-07 score:29.0 best_domain_score:28.7 name:Acetyltransf_10; db:Pfam-A.hmm|PF13420.7 evalue:1.3e-06 score:27.9 best_domain_score:27.6 name:Acetyltransf_4; db:Pfam-A.hmm|PF13508.7 evalue:1.1e-07 score:31.5 best_domain_score:30.9 name:Acetyltransf_7;
76485 75388 CDS
ID metaerg.pl|10492
allgo_ids GO:0005524;
allko_ids K02006; K02052; K05847; K02010; K02056; K02003; K01997; K02017; K02032; K11084; K10441; K01996; K06861; K02071; K02028; K02068; K11072; K02045; K02062; K10562; K01998; K10112; K10111; K02031; K02049; K01995; K02065; K11076; K02013; K05816; K10235; K10000; K02018; K02023; K01990; K10243; K02000; K11962;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__QEYE01;s__QEYE01 sp003122205;
genomedb_acc GCF_003122205.1;
genomedb_target db:genomedb|GCF_003122205.1|WP_109424726.1 1 365 evalue:8.1e-115 qcov:100.00 identity:62.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF13304; PF00005; PF03459;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; TOBE domain;
pfam_id AAA_21; ABC_tran; TOBE;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:9.8e-07 score:28.1 best_domain_score:14.4 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:9.9e-34 score:116.0 best_domain_score:115.3 name:ABC_tran; db:Pfam-A.hmm|PF03459.17 evalue:3.8e-05 score:23.1 best_domain_score:12.5 name:TOBE;
77159 76482 CDS
ID metaerg.pl|10493
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015098;
allko_ids K02018; K02011;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales_A;f__UBA1479;g__UBA1479;s__UBA1479 sp002781745;
genomedb_acc GCA_002781745.1;
genomedb_target db:genomedb|GCA_002781745.1|PIW26329.1 1 222 evalue:5.4e-93 qcov:98.70 identity:79.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.1e-20 score:71.5 best_domain_score:71.1 name:BPD_transp_1;
sprot_desc Molybdenum transport system permease protein ModB;
sprot_id sp|P37731|MODB_AZOVI;
sprot_target db:uniprot_sprot|sp|P37731|MODB_AZOVI 2 216 evalue:2.2e-37 qcov:95.60 identity:45.20;
tigrfam_acc TIGR02141;
tigrfam_desc molybdate ABC transporter, permease protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name modB_ABC;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02141 evalue:5e-67 score:224.7 best_domain_score:224.5 name:TIGR02141;
tm_num 5;
77159 76482 transmembrane_helix
ID metaerg.pl|10494
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology o76509-76577i76614-76682o76725-76793i76926-76994o77052-77120i;
77978 77178 CDS
ID metaerg.pl|10495
allgo_ids GO:0042597; GO:0046872; GO:0030973; GO:0015689;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rubellimicrobium;s__Rubellimicrobium thermophilum;
genomedb_acc GCF_000442315.1;
genomedb_target db:genomedb|GCF_000442315.1|WP_021097759.1 10 266 evalue:9.5e-81 qcov:96.60 identity:61.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF13531;
pfam_desc Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_11;
pfam_target db:Pfam-A.hmm|PF13531.6 evalue:3.4e-45 score:153.8 best_domain_score:153.4 name:SBP_bac_11;
sp YES;
sprot_desc Molybdate-binding protein ModA;
sprot_id sp|P37734|MODA_AZOVI;
sprot_target db:uniprot_sprot|sp|P37734|MODA_AZOVI 19 261 evalue:5.9e-21 qcov:91.40 identity:31.60;
tigrfam_acc TIGR01256;
tigrfam_desc molybdate ABC transporter, periplasmic molybdate-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name modA;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01256 evalue:4.3e-49 score:166.5 best_domain_score:166.3 name:TIGR01256;
77178 77258 signal_peptide
ID metaerg.pl|10496
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
79820 78033 CDS
ID metaerg.pl|10497
allgo_ids GO:0016021; GO:0055085; GO:0008324; GO:0006813;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylomonadaceae;g__PGZD01;s__PGZD01 sp002843155;
genomedb_acc GCA_002843155.1;
genomedb_target db:genomedb|GCA_002843155.1|PKM11774.1 7 595 evalue:1.3e-215 qcov:99.00 identity:67.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF03600; PF00939; PF02080;
pfam_desc Citrate transporter; Sodium:sulfate symporter transmembrane region; TrkA-C domain;
pfam_id CitMHS; Na_sulph_symp; TrkA_C;
pfam_target db:Pfam-A.hmm|PF03600.16 evalue:3.8e-38 score:130.6 best_domain_score:94.0 name:CitMHS; db:Pfam-A.hmm|PF00939.19 evalue:1.1e-14 score:53.7 best_domain_score:40.3 name:Na_sulph_symp; db:Pfam-A.hmm|PF02080.21 evalue:5.1e-21 score:73.5 best_domain_score:40.8 name:TrkA_C;
sprot_desc Putative sulfur deprivation response regulator;
sprot_id sp|Q39593|SAC1_CHLRE;
sprot_target db:uniprot_sprot|sp|Q39593|SAC1_CHLRE 33 595 evalue:5.5e-83 qcov:94.60 identity:35.30;
tm_num 12;
79820 78033 transmembrane_helix
ID metaerg.pl|10498
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
topology o78060-78113i78132-78200o78210-78278i78339-78407o78465-78533i78594-78653o79263-79331i79392-79460o79473-79541i79560-79619o79632-79700i79737-79805o;
80730 80002 CDS
ID metaerg.pl|10499
allec_ids 1.8.4.-;
allgo_ids GO:0005515; GO:0015036; GO:0004601; GO:0006979;
allko_ids K00799; K04097; K11209;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000137.1_3 1 241 evalue:3.2e-107 qcov:99.60 identity:73.40;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
pfam_acc PF00043; PF14497; PF02798; PF13409; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_3; GST_N; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:9.1e-11 score:41.1 best_domain_score:40.4 name:GST_C; db:Pfam-A.hmm|PF14497.6 evalue:5.4e-06 score:25.8 best_domain_score:24.9 name:GST_C_3; db:Pfam-A.hmm|PF02798.20 evalue:4e-14 score:52.0 best_domain_score:51.1 name:GST_N; db:Pfam-A.hmm|PF13409.6 evalue:9.2e-07 score:28.3 best_domain_score:27.1 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:5.7e-09 score:35.5 best_domain_score:34.8 name:GST_N_3;
sprot_desc Disulfide-bond oxidoreductase YfcG;
sprot_id sp|P77526|YFCG_ECOLI;
sprot_target db:uniprot_sprot|sp|P77526|YFCG_ECOLI 1 205 evalue:4.1e-53 qcov:84.70 identity:44.90;
80828 81703 CDS
ID metaerg.pl|10500
allec_ids 3.1.1.45;
allgo_ids GO:0016787; GO:0008806;
allko_ids K01303; K01061;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Azospirillales;f__Azospirillaceae;g__Niveispirillum;s__Niveispirillum sp900188385;
genomedb_acc GCF_900188385.1;
genomedb_target db:genomedb|GCF_900188385.1|WP_089286658.1 9 281 evalue:5.0e-99 qcov:93.80 identity:64.40;
kegg_pathway_id 00364; 00361;
kegg_pathway_name Fluorobenzoate degradation; gamma-Hexachlorocyclohexane degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
metacyc_pathway_id PWY-6193; PWY-6089;
metacyc_pathway_name 3-chlorocatechol degradation II (ortho);; 3-chlorocatechol degradation I (ortho);;
metacyc_pathway_type 3-Chlorocatechol-Degradation;; 3-Chlorocatechol-Degradation;;
pfam_acc PF01738; PF00326;
pfam_desc Dienelactone hydrolase family; Prolyl oligopeptidase family;
pfam_id DLH; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF01738.18 evalue:1.5e-64 score:216.7 best_domain_score:216.5 name:DLH; db:Pfam-A.hmm|PF00326.21 evalue:5.1e-07 score:28.6 best_domain_score:17.3 name:Peptidase_S9;
sp YES;
sprot_desc Putative carboxymethylenebutenolidase;
sprot_id sp|P71505|DLHH_METEA;
sprot_target db:uniprot_sprot|sp|P71505|DLHH_METEA 10 281 evalue:1.6e-96 qcov:93.50 identity:63.90;
tigrfam_acc TIGR01409;
tigrfam_desc Tat (twin-arginine translocation) pathway signal sequence;
tigrfam_mainrole Protein fate;
tigrfam_name TAT_signal_seq;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01409 evalue:0.0022 score:17.5 best_domain_score:16.2 name:TIGR01409;
80828 80926 signal_peptide
ID metaerg.pl|10501
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
81725 82066 CDS
ID metaerg.pl|10502
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000055.1_19 1 113 evalue:7.0e-41 qcov:100.00 identity:73.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
82088 82834 CDS
ID metaerg.pl|10503
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000080.1_22 1 248 evalue:4.5e-101 qcov:100.00 identity:72.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.00354764; 13.7023; 0.0407013; 13.4549; 0.203217;
>Feature NODE_77_length_82793_cov_91.6806
87 2861 CDS
ID metaerg.pl|10504
allec_ids 1.17.1.9; 1.2.1.2;
allgo_ids GO:0009055; GO:0051536; GO:0051539; GO:0008863; GO:0046872; GO:0043546; GO:0015942;
allko_ids K00176; K00170; K05588; K03388; K08348; K08264; K00390; K00817; K00265; K00338; K02027; K02048; K04564; K00369; K05580; K02030; K00124; K00533; K00436; K00203; K11181; K00360; K00376; K00441; K00171; K00205; K02567; K00336; K13483; K00372; K00226; K00125; K00122; K05813; K00380; K03934; K11260; K04014; K00367; K00873; K00337; K00204; K00245; K00235; K03941; K08345; K00123; K00202; K00246; K02035; K00240; K00201; K05299; K15905; K00370; K00443; K03390; K00532;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480443.1 1 924 evalue:0.0e+00 qcov:100.00 identity:87.90;
kegg_pathway_id 00720; 00401; 00400; 00240; 00632; 02010; 00620; 00640; 00650; 00790; 05012; 00350; 00630; 00920; 00710; 00010; 00230; 00020; 02020; 00910; 00251; 00633; 00680; 00340; 00360; 00190; 00130;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism; Benzoate degradation via CoA ligation; ABC transporters - General; Pyruvate metabolism; Propanoate metabolism; Butanoate metabolism; Folate biosynthesis; Parkinson's disease; Tyrosine metabolism; Glyoxylate and dicarboxylate metabolism; Sulfur metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Purine metabolism; Citrate cycle (TCA cycle); Two-component system - General; Nitrogen metabolism; Glutamate metabolism; Trinitrotoluene degradation; Methane metabolism; Histidine metabolism; Phenylalanine metabolism; Oxidative phosphorylation; Ubiquinone biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metabolic_acc TIGR01591;
metabolic_process compound:C1 compounds;process:Formate oxidation;gene:formate dehydrogenase, alpha subunit;;
metacyc_pathway_id PWY-1882; PWY-5497; PWY-1881; P164-PWY;
metacyc_pathway_name superpathway of C1 compounds oxidation to CO2;; purine nucleobases degradation II (anaerobic);; formate oxidation to CO2;; purine nucleobases degradation I (anaerobic);;
metacyc_pathway_type C1-COMPOUNDS; Super-Pathways;; Fermentation; Purine-Degradation;; C1-COMPOUNDS; CHEMOAUTOTROPHIC-ENERGY-METABOLISM;; Fermentation; Purine-Degradation;;
pfam_acc PF00111; PF13510; PF00037; PF12837; PF12838; PF13183; PF13187; PF00384; PF04879; PF01568;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; 2Fe-2S iron-sulfur cluster binding domain; 4Fe-4S binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain; Molydopterin dinucleotide binding domain;
pfam_id Fer2; Fer2_4; Fer4; Fer4_6; Fer4_7; Fer4_8; Fer4_9; Molybdopterin; Molybdop_Fe4S4; Molydop_binding;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:3.9e-05 score:22.7 best_domain_score:22.7 name:Fer2; db:Pfam-A.hmm|PF13510.6 evalue:4.4e-18 score:64.4 best_domain_score:62.5 name:Fer2_4; db:Pfam-A.hmm|PF00037.27 evalue:6.1e-08 score:31.4 best_domain_score:26.1 name:Fer4; db:Pfam-A.hmm|PF12837.7 evalue:6.2e-08 score:31.7 best_domain_score:20.1 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:1.4e-06 score:28.0 best_domain_score:28.0 name:Fer4_7; db:Pfam-A.hmm|PF13183.6 evalue:1.1e-06 score:28.3 best_domain_score:28.3 name:Fer4_8; db:Pfam-A.hmm|PF13187.6 evalue:5.9e-07 score:28.8 best_domain_score:28.8 name:Fer4_9; db:Pfam-A.hmm|PF00384.22 evalue:1.4e-86 score:290.4 best_domain_score:290.0 name:Molybdopterin; db:Pfam-A.hmm|PF04879.16 evalue:1e-16 score:59.9 best_domain_score:58.4 name:Molybdop_Fe4S4; db:Pfam-A.hmm|PF01568.21 evalue:1.2e-27 score:95.3 best_domain_score:93.6 name:Molydop_binding;
sprot_desc Formate dehydrogenase subunit alpha;
sprot_id sp|P61159|FDHA_METJA;
sprot_target db:uniprot_sprot|sp|P61159|FDHA_METJA 230 917 evalue:1.6e-150 qcov:74.50 identity:40.40;
tigrfam_acc TIGR01591;
tigrfam_desc formate dehydrogenase, alpha subunit;
tigrfam_name Fdh-alpha;
tigrfam_target db:TIGRFAMs.hmm|TIGR01591 evalue:8.7e-223 score:740.3 best_domain_score:740.0 name:TIGR01591;
4255 2936 CDS
ID metaerg.pl|10505
allec_ids 3.6.4.13;
allgo_ids GO:0003676; GO:0005524; GO:0005829; GO:0004004; GO:0003723; GO:0009408; GO:0042255;
allko_ids K13181; K03732; K14635; K05592; K01529; K13982; K13116; K12614; K12858; K13179; K13178; K12811; K13025; K05591; K13131; K03257; K12823; K12812; K03578; K13184; K13177; K05590; K01509; K14442; K13185; K11594; K13182; K11927; K03579; K10896; K12835;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798563.1 1 439 evalue:8.9e-209 qcov:100.00 identity:87.30;
kegg_pathway_id 00230; 00790;
kegg_pathway_name Purine metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00270; PF00271; PF04851;
pfam_desc DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit;
pfam_id DEAD; Helicase_C; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:2.9e-49 score:166.5 best_domain_score:165.6 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:1.2e-29 score:102.1 best_domain_score:100.3 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:4.3e-07 score:29.3 best_domain_score:28.4 name:ResIII;
sprot_desc ATP-dependent RNA helicase RhlE;
sprot_id sp|P25888|RHLE_ECOLI;
sprot_target db:uniprot_sprot|sp|P25888|RHLE_ECOLI 4 407 evalue:3.0e-86 qcov:92.00 identity:42.80;
4524 4832 CDS
ID metaerg.pl|10506
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
4771 4977 CDS
ID metaerg.pl|10507
allgo_ids GO:0003676; GO:0005737; GO:0003677;
allko_ids K03704;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798567.1 1 68 evalue:2.2e-29 qcov:100.00 identity:95.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00313;
pfam_desc 'Cold-shock' DNA-binding domain;
pfam_id CSD;
pfam_target db:Pfam-A.hmm|PF00313.22 evalue:8.9e-23 score:79.2 best_domain_score:79.1 name:CSD;
sprot_desc Probable cold shock protein y4cH;
sprot_id sp|P55390|Y4CH_SINFN;
sprot_target db:uniprot_sprot|sp|P55390|Y4CH_SINFN 1 66 evalue:1.9e-16 qcov:97.10 identity:64.20;
5366 5043 CDS
ID metaerg.pl|10508
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798569.1 1 106 evalue:1.2e-37 qcov:99.10 identity:72.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF03960;
pfam_desc ArsC family;
pfam_id ArsC;
pfam_target db:Pfam-A.hmm|PF03960.15 evalue:3.1e-09 score:36.0 best_domain_score:35.7 name:ArsC;
sprot_desc hypothetical protein;
sprot_id sp|P44515|Y103_HAEIN;
sprot_target db:uniprot_sprot|sp|P44515|Y103_HAEIN 3 96 evalue:1.8e-08 qcov:87.90 identity:36.90;
6317 5376 CDS
ID metaerg.pl|10509
allko_ids K01048;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480447.1 1 309 evalue:2.3e-118 qcov:98.70 identity:67.60;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:3.2e-07 score:29.5 best_domain_score:28.4 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:8.1e-09 score:35.6 best_domain_score:35.6 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:3.7e-35 score:120.6 best_domain_score:120.3 name:Hydrolase_4;
6604 6314 CDS
ID metaerg.pl|10510
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480448.1 1 95 evalue:9.8e-36 qcov:99.00 identity:83.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF02036;
pfam_desc SCP-2 sterol transfer family;
pfam_id SCP2;
pfam_target db:Pfam-A.hmm|PF02036.17 evalue:2.6e-19 score:68.8 best_domain_score:68.6 name:SCP2;
6689 7237 CDS
ID metaerg.pl|10511
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657687.1 2 182 evalue:2.0e-69 qcov:99.50 identity:74.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00515; PF13428; PF14559; PF07719;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_1; TPR_14; TPR_19; TPR_2;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:5.2e-07 score:28.5 best_domain_score:10.5 name:TPR_1; db:Pfam-A.hmm|PF13428.6 evalue:7.2e-08 score:31.9 best_domain_score:18.2 name:TPR_14; db:Pfam-A.hmm|PF14559.6 evalue:9.2e-07 score:28.5 best_domain_score:17.4 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:2.7e-11 score:42.0 best_domain_score:17.0 name:TPR_2;
sp YES;
6689 6754 signal_peptide
ID metaerg.pl|10512
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
7269 10061 CDS
ID metaerg.pl|10513
allko_ids K03725;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470597.1 3 929 evalue:0.0e+00 qcov:99.70 identity:84.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00271;
pfam_desc Helicase conserved C-terminal domain;
pfam_id Helicase_C;
pfam_target db:Pfam-A.hmm|PF00271.31 evalue:4.2e-09 score:36.0 best_domain_score:35.1 name:Helicase_C;
10067 10444 CDS
ID metaerg.pl|10514
allgo_ids GO:0003723; GO:0003677; GO:0043023; GO:0003727; GO:0034605;
allko_ids K04762;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798571.1 1 125 evalue:9.4e-47 qcov:100.00 identity:79.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF01479;
pfam_desc S4 domain;
pfam_id S4;
pfam_target db:Pfam-A.hmm|PF01479.25 evalue:2.7e-15 score:55.0 best_domain_score:54.2 name:S4;
sprot_desc Heat shock protein 15;
sprot_id sp|P0ACH0|HSLR_ECO57;
sprot_target db:uniprot_sprot|sp|P0ACH0|HSLR_ECO57 4 114 evalue:2.4e-12 qcov:88.80 identity:40.30;
10519 10857 CDS
ID metaerg.pl|10515
allgo_ids GO:0051538; GO:0051539; GO:0009055; GO:0046872;
allko_ids K11260; K00380; K00122; K04014; K00204; K00245; K00371; K00123; K00240; K00395; K00532; K03390; K00443; K03388; K00207; K00176; K00170; K05588; K00390; K08349; K00265; K00533; K00124; K00172; K00205; K00171; K00441; K00125; K00226; K00335;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246957.1 1 112 evalue:4.3e-59 qcov:100.00 identity:95.50;
kegg_pathway_id 02020; 00910; 00633; 00251; 00680; 00410; 00190; 00130; 00920; 00010; 00020; 00770; 00450; 00620; 00640; 00650; 00790; 00630; 00720; 00983; 00240; 00632;
kegg_pathway_name Two-component system - General; Nitrogen metabolism; Trinitrotoluene degradation; Glutamate metabolism; Methane metabolism; beta-Alanine metabolism; Oxidative phosphorylation; Ubiquinone biosynthesis; Sulfur metabolism; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Pantothenate and CoA biosynthesis; Selenoamino acid metabolism; Pyruvate metabolism; Propanoate metabolism; Butanoate metabolism; Folate biosynthesis; Glyoxylate and dicarboxylate metabolism; Reductive carboxylate cycle (CO2 fixation); Drug metabolism - other enzymes; Pyrimidine metabolism; Benzoate degradation via CoA ligation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF11953; PF00037; PF13237; PF13484; PF12837; PF12838; PF13187;
pfam_desc Domain of unknown function (DUF3470); 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S double cluster binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id DUF3470; Fer4; Fer4_10; Fer4_16; Fer4_6; Fer4_7; Fer4_9;
pfam_target db:Pfam-A.hmm|PF11953.8 evalue:8e-18 score:63.4 best_domain_score:62.9 name:DUF3470; db:Pfam-A.hmm|PF00037.27 evalue:5.2e-09 score:34.8 best_domain_score:31.0 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:2.3e-07 score:30.1 best_domain_score:20.9 name:Fer4_10; db:Pfam-A.hmm|PF13484.6 evalue:1.2e-07 score:31.8 best_domain_score:24.9 name:Fer4_16; db:Pfam-A.hmm|PF12837.7 evalue:5.4e-06 score:25.5 best_domain_score:19.9 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:2.2e-06 score:27.4 best_domain_score:23.9 name:Fer4_7; db:Pfam-A.hmm|PF13187.6 evalue:6.1e-08 score:32.0 best_domain_score:24.7 name:Fer4_9;
sprot_desc Ferredoxin-2;
sprot_id sp|P0CY91|FER2_RHOCA;
sprot_target db:uniprot_sprot|sp|P0CY91|FER2_RHOCA 1 111 evalue:2.1e-52 qcov:99.10 identity:82.90;
11191 11700 CDS
ID metaerg.pl|10516
allko_ids K07736;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798574.1 1 169 evalue:1.3e-78 qcov:100.00 identity:94.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF02559;
pfam_desc CarD-like/TRCF domain;
pfam_id CarD_CdnL_TRCF;
pfam_target db:Pfam-A.hmm|PF02559.16 evalue:5.2e-18 score:64.8 best_domain_score:64.2 name:CarD_CdnL_TRCF;
sprot_desc RNA polymerase-binding transcription factor CarD;
sprot_id sp|A0R561|CARD_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R561|CARD_MYCS2 9 166 evalue:6.9e-15 qcov:93.50 identity:33.50;
11837 12577 CDS
ID metaerg.pl|10517
allgo_ids GO:0005737; GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798576.1 1 246 evalue:8.1e-119 qcov:100.00 identity:89.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF01709;
pfam_desc Transcriptional regulator;
pfam_id Transcrip_reg;
pfam_target db:Pfam-A.hmm|PF01709.20 evalue:4.8e-96 score:320.1 best_domain_score:319.9 name:Transcrip_reg;
sprot_desc Probable transcriptional regulatory protein SPO1072;
sprot_id sp|Q5LUI2|Y1072_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LUI2|Y1072_RUEPO 1 246 evalue:2.6e-111 qcov:100.00 identity:82.10;
tigrfam_acc TIGR01033;
tigrfam_desc DNA-binding regulatory protein, YebC/PmpR family;
tigrfam_mainrole Regulatory functions;
tigrfam_name TIGR01033;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01033 evalue:9.3e-95 score:316.1 best_domain_score:315.9 name:TIGR01033;
15128 12783 CDS
ID metaerg.pl|10518
allgo_ids GO:0000155; GO:0007165;
allko_ids K02030; K11527; K13587; K10715; K07678; K02482; K08801; K14489; K02480; K07653; K07638; K07636; K02489; K07697; K07716; K07710; K07640; K07656; K01768; K02668; K03388; K08479; K07674; K10916; K07680; K07647; K10942; K13040; K07675; K07717; K12767; K02486; K11383; K14509; K11520; K07769; K04757; K10125; K02342; K11629; K11357; K07709; K13532; K07644; K01769; K07650; K06379; K07676; K10681; K07679; K02478; K07648; K07651; K07718; K07698; K07778; K11354; K11633; K07768; K00873; K07711; K13533; K11328; K13598; K07641; K07646; K07639; K08475; K07673; K01120; K07652; K07654; K07682; K07649; K00936; K07777; K03407; K07637; K11231; K07643; K02491; K07677; K07645; K07708; K10909; K07704; K01937; K08282; K02484; K04486; K11640; K11711; K07642;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657689.1 14 781 evalue:4.0e-244 qcov:98.30 identity:60.60;
kegg_pathway_id 00010; 00710; 03030; 00240; 05111; 00230; 03090; 00620; 04011; 02020; 00340; 00790;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; DNA replication; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Histidine metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF02518; PF00512; PF00989; PF08448; PF13188; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; PAS; PAS_4; PAS_8; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.9e-22 score:79.1 best_domain_score:78.1 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:6.3e-09 score:35.0 best_domain_score:33.3 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:1.5e-08 score:33.9 best_domain_score:15.7 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:6.6e-07 score:28.8 best_domain_score:19.7 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:2.2e-07 score:30.0 best_domain_score:15.2 name:PAS_8; db:Pfam-A.hmm|PF00072.24 evalue:5e-17 score:61.3 best_domain_score:59.6 name:Response_reg;
tm_num 2;
15128 12783 transmembrane_helix
ID metaerg.pl|10519
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology o12855-12923i12942-13010o;
16400 15234 CDS
ID metaerg.pl|10520
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798582.1 1 382 evalue:9.2e-133 qcov:98.50 identity:64.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF01189;
pfam_desc 16S rRNA methyltransferase RsmB/F;
pfam_id Methyltr_RsmB-F;
pfam_target db:Pfam-A.hmm|PF01189.17 evalue:5.3e-24 score:84.2 best_domain_score:83.1 name:Methyltr_RsmB-F;
17951 16572 CDS
ID metaerg.pl|10521
allgo_ids GO:0005887; GO:0015128;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479048.1 1 459 evalue:7.6e-203 qcov:100.00 identity:83.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
sprot_desc Uncharacterized transporter YxjC;
sprot_id sp|P42314|YXJC_BACSU;
sprot_target db:uniprot_sprot|sp|P42314|YXJC_BACSU 4 434 evalue:1.2e-90 qcov:93.90 identity:45.80;
tm_num 11;
17951 16572 transmembrane_helix
ID metaerg.pl|10522
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology i16575-16628o16641-16709i16722-16790o16863-16931i16989-17057o17100-17168i17253-17321o17379-17447i17508-17576o17619-17687i17871-17939o;
18075 19478 CDS
ID metaerg.pl|10523
allec_ids 6.3.2.9;
allgo_ids GO:0005524; GO:0009058; GO:0016874; GO:0005737; GO:0008764; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01924; K01925; K01928;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795574.1 1 467 evalue:3.6e-232 qcov:100.00 identity:87.40;
kegg_pathway_id 00300; 00471; 00550;
kegg_pathway_name Lysine biosynthesis; D-Glutamine and D-glutamate metabolism; Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metacyc_pathway_id PWY-6470; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6386; PWY-5265; PWY-6385; PWY-6387;
metacyc_pathway_name peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis III (mycobacteria);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;;
pfam_acc PF02875; PF08245;
pfam_desc Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF02875.21 evalue:1.6e-06 score:27.5 best_domain_score:25.9 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:1.2e-30 score:106.2 best_domain_score:105.7 name:Mur_ligase_M;
sp YES;
sprot_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
sprot_id sp|A3PHS4|MURD_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PHS4|MURD_RHOS1 1 462 evalue:4.9e-204 qcov:98.90 identity:78.00;
tigrfam_acc TIGR01087;
tigrfam_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murD;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01087 evalue:4.5e-107 score:358.0 best_domain_score:357.8 name:TIGR01087;
18075 18185 signal_peptide
ID metaerg.pl|10524
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
19471 20382 CDS
ID metaerg.pl|10525
allgo_ids GO:0016020; GO:0016021; GO:0005887; GO:0005886;
allko_ids K05786;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795573.1 1 300 evalue:2.5e-133 qcov:99.00 identity:82.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:3.8e-15 score:55.5 best_domain_score:43.9 name:EamA;
sprot_desc Uncharacterized transporter YojE;
sprot_id sp|O31859|YOJE_BACSU;
sprot_target db:uniprot_sprot|sp|O31859|YOJE_BACSU 2 291 evalue:3.4e-49 qcov:95.70 identity:37.60;
tigrfam_acc TIGR00688;
tigrfam_desc protein RarD;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name rarD;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR00688 evalue:2.3e-51 score:173.9 best_domain_score:173.9 name:TIGR00688;
tm_num 9;
19471 20382 transmembrane_helix
ID metaerg.pl|10526
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology o19498-19566i19579-19638o19681-19749i19774-19833o19876-19944i19999-20067o20095-20163i20182-20250o20278-20331i;
20399 20836 CDS
ID metaerg.pl|10527
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469861.1 5 145 evalue:1.3e-47 qcov:97.20 identity:70.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF06094;
pfam_desc Gamma-glutamyl cyclotransferase, AIG2-like;
pfam_id GGACT;
pfam_target db:Pfam-A.hmm|PF06094.12 evalue:5e-08 score:32.8 best_domain_score:32.2 name:GGACT;
tm_num 1;
20399 20836 transmembrane_helix
ID metaerg.pl|10528
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology i20411-20479o;
20858 21844 CDS
ID metaerg.pl|10529
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795571.1 1 315 evalue:1.2e-96 qcov:96.00 identity:57.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF12224;
pfam_desc Putative amidoligase enzyme;
pfam_id Amidoligase_2;
pfam_target db:Pfam-A.hmm|PF12224.8 evalue:4.5e-40 score:137.1 best_domain_score:136.9 name:Amidoligase_2;
22755 21823 CDS
ID metaerg.pl|10530
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0005737; GO:0009037; GO:0007049; GO:0051301; GO:0007059; GO:0006313;
allko_ids K04763;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795570.1 1 309 evalue:4.9e-145 qcov:99.70 identity:83.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00589; PF02899; PF13495; PF13102;
pfam_desc Phage integrase family; Phage integrase, N-terminal SAM-like domain; Phage integrase, N-terminal SAM-like domain; Phage integrase SAM-like domain;
pfam_id Phage_integrase; Phage_int_SAM_1; Phage_int_SAM_4; Phage_int_SAM_5;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:2.8e-42 score:143.6 best_domain_score:143.1 name:Phage_integrase; db:Pfam-A.hmm|PF02899.17 evalue:7.8e-22 score:76.6 best_domain_score:72.8 name:Phage_int_SAM_1; db:Pfam-A.hmm|PF13495.6 evalue:3.2e-10 score:39.6 best_domain_score:35.2 name:Phage_int_SAM_4; db:Pfam-A.hmm|PF13102.6 evalue:3.3e-05 score:23.4 best_domain_score:22.6 name:Phage_int_SAM_5;
sprot_desc Tyrosine recombinase XerD;
sprot_id sp|Q92ME3|XERD_RHIME;
sprot_target db:uniprot_sprot|sp|Q92ME3|XERD_RHIME 1 309 evalue:1.9e-74 qcov:99.70 identity:49.20;
24339 22762 CDS
ID metaerg.pl|10531
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795569.1 11 525 evalue:6.7e-171 qcov:98.10 identity:64.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
sp YES;
22762 22833 signal_peptide
ID metaerg.pl|10532
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
24616 25161 CDS
ID metaerg.pl|10533
allec_ids 2.7.1.71;
allgo_ids GO:0005737; GO:0005524; GO:0000287; GO:0004765; GO:0009073; GO:0009423;
allko_ids K00014; K01735; K00891; K13829;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481076.1 1 181 evalue:5.0e-65 qcov:100.00 identity:75.10;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metacyc_pathway_id COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; PWY-6163; ARO-PWY; PWY-6165;
metacyc_pathway_name superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; chorismate biosynthesis from 3-dehydroquinate;; chorismate biosynthesis I;; chorismate biosynthesis II (archaea);;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; Chorismate-Biosynthesis;; Chorismate-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;;
pfam_acc PF01202;
pfam_desc Shikimate kinase;
pfam_id SKI;
pfam_target db:Pfam-A.hmm|PF01202.22 evalue:1.2e-41 score:141.7 best_domain_score:141.6 name:SKI;
sprot_desc Shikimate kinase;
sprot_id sp|Q3J2I9|AROK_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J2I9|AROK_RHOS4 3 129 evalue:2.2e-43 qcov:70.20 identity:70.10;
25158 26279 CDS
ID metaerg.pl|10534
allec_ids 4.2.3.4;
allgo_ids GO:0016491; GO:0046872; GO:0055114; GO:0005737; GO:0003856; GO:0000166; GO:0009073; GO:0009423;
allko_ids K13830; K00014; K01735; K03785; K00891; K13829; K00800;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795566.1 1 372 evalue:2.5e-180 qcov:99.70 identity:86.60;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metacyc_pathway_id ARO-PWY; PWY-6164; COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY;
metacyc_pathway_name chorismate biosynthesis I;; 3-dehydroquinate biosynthesis I;; superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;;
metacyc_pathway_type Chorismate-Biosynthesis; Super-Pathways;; 3-Dehydroquinate-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF01761; PF00465; PF13685;
pfam_desc 3-dehydroquinate synthase; Iron-containing alcohol dehydrogenase ; Iron-containing alcohol dehydrogenase;
pfam_id DHQ_synthase; Fe-ADH; Fe-ADH_2;
pfam_target db:Pfam-A.hmm|PF01761.20 evalue:5.8e-93 score:310.1 best_domain_score:309.8 name:DHQ_synthase; db:Pfam-A.hmm|PF00465.19 evalue:1.2e-08 score:33.4 best_domain_score:30.1 name:Fe-ADH; db:Pfam-A.hmm|PF13685.6 evalue:3.5e-14 score:52.3 best_domain_score:47.4 name:Fe-ADH_2;
sprot_desc 3-dehydroquinate synthase;
sprot_id sp|Q1GGQ1|AROB_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GGQ1|AROB_RUEST 7 370 evalue:3.8e-151 qcov:97.60 identity:76.10;
tigrfam_acc TIGR01357;
tigrfam_desc 3-dehydroquinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name aroB;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01357 evalue:1.6e-101 score:339.1 best_domain_score:338.8 name:TIGR01357;
26396 27361 CDS
ID metaerg.pl|10535
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087207721.1 4 321 evalue:2.7e-61 qcov:99.10 identity:44.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00082;
pfam_desc Subtilase family;
pfam_id Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:9.8e-12 score:43.9 best_domain_score:41.7 name:Peptidase_S8;
sp YES;
26396 26443 lipoprotein_signal_peptide
ID metaerg.pl|10536
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
27980 27378 CDS
ID metaerg.pl|10537
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_007205219.1 21 200 evalue:1.7e-45 qcov:90.00 identity:53.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
sp YES;
tm_num 1;
27378 27467 signal_peptide
ID metaerg.pl|10538
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
27980 27378 transmembrane_helix
ID metaerg.pl|10539
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology i27396-27464o;
28482 28144 CDS
ID metaerg.pl|10540
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795564.1 1 112 evalue:4.5e-48 qcov:100.00 identity:81.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF04248;
pfam_desc Domain of unknown function (DUF427);
pfam_id NTP_transf_9;
pfam_target db:Pfam-A.hmm|PF04248.12 evalue:3.8e-19 score:67.6 best_domain_score:67.4 name:NTP_transf_9;
30372 28561 CDS
ID metaerg.pl|10541
allec_ids 3.4.11.9;
allgo_ids GO:0016787; GO:0009507; GO:0009570; GO:0005737; GO:0046872; GO:0070006;
allko_ids K01262;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795563.1 1 603 evalue:8.5e-287 qcov:100.00 identity:78.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF01321; PF16189; PF00557; PF16188;
pfam_desc Creatinase/Prolidase N-terminal domain; Creatinase/Prolidase N-terminal domain; Metallopeptidase family M24; C-terminal region of peptidase_M24;
pfam_id Creatinase_N; Creatinase_N_2; Peptidase_M24; Peptidase_M24_C;
pfam_target db:Pfam-A.hmm|PF01321.18 evalue:8.6e-20 score:71.0 best_domain_score:62.5 name:Creatinase_N; db:Pfam-A.hmm|PF16189.5 evalue:2.3e-28 score:98.6 best_domain_score:97.7 name:Creatinase_N_2; db:Pfam-A.hmm|PF00557.24 evalue:3.9e-46 score:156.6 best_domain_score:156.1 name:Peptidase_M24; db:Pfam-A.hmm|PF16188.5 evalue:5.9e-21 score:73.5 best_domain_score:71.6 name:Peptidase_M24_C;
sprot_desc Aminopeptidase P2;
sprot_id sp|Q8RY11|AMPP2_ARATH;
sprot_target db:uniprot_sprot|sp|Q8RY11|AMPP2_ARATH 29 603 evalue:5.5e-107 qcov:95.40 identity:37.50;
31055 30444 CDS
ID metaerg.pl|10542
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795562.1 1 203 evalue:1.8e-87 qcov:100.00 identity:85.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF07750;
pfam_desc GcrA cell cycle regulator;
pfam_id GcrA;
pfam_target db:Pfam-A.hmm|PF07750.11 evalue:2.4e-52 score:176.8 best_domain_score:171.9 name:GcrA;
31223 32008 CDS
ID metaerg.pl|10543
allgo_ids GO:0016020; GO:0043190; GO:0055085;
allko_ids K01992;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657445.1 1 261 evalue:4.1e-121 qcov:100.00 identity:87.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF01061; PF12698;
pfam_desc ABC-2 type transporter; ABC-2 family transporter protein;
pfam_id ABC2_membrane; ABC2_membrane_3;
pfam_target db:Pfam-A.hmm|PF01061.24 evalue:3.7e-32 score:110.7 best_domain_score:110.3 name:ABC2_membrane; db:Pfam-A.hmm|PF12698.7 evalue:1.2e-08 score:33.7 best_domain_score:33.7 name:ABC2_membrane_3;
sprot_desc Inner membrane transport permease YadH;
sprot_id sp|P0AFN8|YADH_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFN8|YADH_ECO57 11 260 evalue:5.2e-38 qcov:95.80 identity:33.60;
tm_num 6;
31223 32008 transmembrane_helix
ID metaerg.pl|10544
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology i31295-31363o31400-31468i31562-31630o31658-31726i31745-31813o31913-31981i;
32100 32504 CDS
ID metaerg.pl|10545
allgo_ids GO:0009055; GO:0020037; GO:0046872;
allko_ids K08738;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795560.1 3 134 evalue:3.5e-47 qcov:98.50 identity:67.90;
kegg_pathway_id 04210; 04115; 05012; 05014;
kegg_pathway_name Apoptosis; p53 signaling pathway; Parkinson's disease; Amyotrophic lateral sclerosis (ALS);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
sp YES;
sprot_desc Cytochrome c-551;
sprot_id sp|P07625|CY551_ROSDO;
sprot_target db:uniprot_sprot|sp|P07625|CY551_ROSDO 3 133 evalue:1.5e-20 qcov:97.80 identity:39.40;
32100 32165 signal_peptide
ID metaerg.pl|10546
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
32806 34014 CDS
ID metaerg.pl|10547
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795555.1 1 400 evalue:3.8e-166 qcov:99.50 identity:79.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
tm_num 4;
32806 34014 transmembrane_helix
ID metaerg.pl|10548
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology i32866-32934o32947-33015i33220-33288o33397-33465i;
34019 35794 CDS
ID metaerg.pl|10549
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795554.1 1 591 evalue:2.8e-226 qcov:100.00 identity:75.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00691;
pfam_desc OmpA family;
pfam_id OmpA;
pfam_target db:Pfam-A.hmm|PF00691.20 evalue:2.2e-21 score:75.3 best_domain_score:66.1 name:OmpA;
tm_num 1;
34019 35794 transmembrane_helix
ID metaerg.pl|10550
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology i34076-34144o;
36570 36007 CDS
ID metaerg.pl|10551
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798884.1 1 187 evalue:1.2e-74 qcov:100.00 identity:76.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF01814;
pfam_desc Hemerythrin HHE cation binding domain;
pfam_id Hemerythrin;
pfam_target db:Pfam-A.hmm|PF01814.23 evalue:4.2e-19 score:68.7 best_domain_score:68.2 name:Hemerythrin;
38133 36793 CDS
ID metaerg.pl|10552
allec_ids 6.1.1.15;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004827; GO:0006433;
allko_ids K01881;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798886.1 1 444 evalue:1.7e-247 qcov:99.60 identity:94.10;
kegg_pathway_id 00970; 00330;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Arginine and proline metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03129; PF00587;
pfam_desc Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T);
pfam_id HGTP_anticodon; tRNA-synt_2b;
pfam_target db:Pfam-A.hmm|PF03129.20 evalue:7.2e-18 score:63.8 best_domain_score:62.9 name:HGTP_anticodon; db:Pfam-A.hmm|PF00587.25 evalue:2.2e-35 score:121.5 best_domain_score:120.9 name:tRNA-synt_2b;
sprot_desc Proline--tRNA ligase;
sprot_id sp|A8LQU6|SYP_DINSH;
sprot_target db:uniprot_sprot|sp|A8LQU6|SYP_DINSH 1 444 evalue:5.3e-232 qcov:99.60 identity:87.80;
tigrfam_acc TIGR00409;
tigrfam_desc proline--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name proS_fam_II;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00409 evalue:7.5e-142 score:473.2 best_domain_score:298.8 name:TIGR00409;
39113 38328 CDS
ID metaerg.pl|10553
allgo_ids GO:0016021; GO:0005886;
allko_ids K06890;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798887.1 1 261 evalue:1.3e-119 qcov:100.00 identity:90.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF01027;
pfam_desc Inhibitor of apoptosis-promoting Bax1;
pfam_id Bax1-I;
pfam_target db:Pfam-A.hmm|PF01027.20 evalue:1e-54 score:184.7 best_domain_score:184.4 name:Bax1-I;
sprot_desc hypothetical protein;
sprot_id sp|Q9A2A3|Y3663_CAUVC;
sprot_target db:uniprot_sprot|sp|Q9A2A3|Y3663_CAUVC 1 258 evalue:5.1e-41 qcov:98.90 identity:44.00;
tm_num 7;
39113 38328 transmembrane_helix
ID metaerg.pl|10554
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology i38418-38486o38565-38633i38652-38720o38733-38801i38820-38888o38898-38957i39042-39101o;
40221 39256 CDS
ID metaerg.pl|10555
allec_ids 1.-.-.-;
allgo_ids GO:0055114; GO:0016491;
allko_ids K13953; K07538; K00001; K00344;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798889.1 1 321 evalue:2.4e-139 qcov:100.00 identity:78.80;
kegg_pathway_id 00641; 00624; 00010; 00350; 00632; 00120; 00071;
kegg_pathway_name 3-Chloroacrylic acid degradation; 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis; Tyrosine metabolism; Benzoate degradation via CoA ligation; Bile acid biosynthesis; Fatty acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metacyc_pathway_id PWY-5469; PWY-5479; PWY-5987; PWY-6113; PWYG-321; PWY-4302; PWY-5271; PWY-5826; PWY-2821;
metacyc_pathway_name sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;;
metacyc_pathway_type LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;;
pfam_acc PF08240; PF00107; PF13602;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N; ADH_zinc_N_2;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:2.5e-13 score:49.1 best_domain_score:47.8 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:3.8e-25 score:87.6 best_domain_score:86.4 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:2.7e-16 score:60.1 best_domain_score:58.9 name:ADH_zinc_N_2;
sprot_desc Quinone oxidoreductase-like protein 2;
sprot_id sp|B0BNC9|QORL2_RAT;
sprot_target db:uniprot_sprot|sp|B0BNC9|QORL2_RAT 2 319 evalue:2.1e-49 qcov:99.10 identity:34.50;
40437 40880 CDS
ID metaerg.pl|10556
allgo_ids GO:0043565;
allko_ids K00891; K00517; K01486; K00012;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798892.1 28 147 evalue:9.7e-43 qcov:81.60 identity:75.80;
kegg_pathway_id 00903; 00040; 00626; 00520; 00500; 00230; 00940; 00400; 00361;
kegg_pathway_name Limonene and pinene degradation; Pentose and glucuronate interconversions; Naphthalene and anthracene degradation; Nucleotide sugars metabolism; Starch and sucrose metabolism; Purine metabolism; Phenylpropanoid biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; gamma-Hexachlorocyclohexane degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF12844; PF13443; PF01381; PF13560;
pfam_desc Helix-turn-helix domain; Cro/C1-type HTH DNA-binding domain; Helix-turn-helix; Helix-turn-helix domain;
pfam_id HTH_19; HTH_26; HTH_3; HTH_31;
pfam_target db:Pfam-A.hmm|PF12844.7 evalue:2.3e-08 score:33.2 best_domain_score:32.5 name:HTH_19; db:Pfam-A.hmm|PF13443.6 evalue:1.2e-05 score:24.9 best_domain_score:24.1 name:HTH_26; db:Pfam-A.hmm|PF01381.22 evalue:7.6e-13 score:47.5 best_domain_score:46.5 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:2.9e-09 score:36.4 best_domain_score:34.5 name:HTH_31;
40980 41801 CDS
ID metaerg.pl|10557
allec_ids 3.1.3.15;
allgo_ids GO:0046854; GO:0009507; GO:0004401; GO:0008934; GO:0052832; GO:0052833; GO:0052834; GO:0046872; GO:0042578; GO:0000105; GO:0006021;
allko_ids K18649;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799282.1 21 266 evalue:5.5e-100 qcov:90.10 identity:74.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metacyc_pathway_id PRPP-PWY; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; HISTIDINE-SYN;;
pfam_acc PF00459;
pfam_desc Inositol monophosphatase family;
pfam_id Inositol_P;
pfam_target db:Pfam-A.hmm|PF00459.25 evalue:6.3e-46 score:156.3 best_domain_score:156.1 name:Inositol_P;
sprot_desc Bifunctional phosphatase IMPL2, chloroplastic;
sprot_id sp|Q6NPM8|HIS7_ARATH;
sprot_target db:uniprot_sprot|sp|Q6NPM8|HIS7_ARATH 5 267 evalue:1.9e-38 qcov:96.30 identity:38.70;
tigrfam_acc TIGR02067;
tigrfam_desc histidinol-phosphatase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name his_9_HisN;
tigrfam_sub1role Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR02067 evalue:1.7e-84 score:282.4 best_domain_score:282.3 name:TIGR02067;
42571 41825 CDS
ID metaerg.pl|10558
allec_ids 3.1.1.93;
allgo_ids GO:0005829; GO:0005739; GO:0004553; GO:0102390; GO:0019391;
allko_ids K13702;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798894.1 1 241 evalue:1.9e-107 qcov:97.20 identity:78.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:6.5e-12 score:44.9 best_domain_score:44.5 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:9.4e-12 score:45.2 best_domain_score:44.6 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:7.7e-15 score:54.0 best_domain_score:40.5 name:Hydrolase_4;
sprot_desc Mycophenolic acid acyl-glucuronide esterase, mitochondrial;
sprot_id sp|Q5E9H9|ABHDA_BOVIN;
sprot_target db:uniprot_sprot|sp|Q5E9H9|ABHDA_BOVIN 13 241 evalue:1.1e-37 qcov:92.30 identity:35.20;
43874 42555 CDS
ID metaerg.pl|10559
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798895.1 6 436 evalue:1.9e-174 qcov:98.20 identity:80.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
tm_num 9;
43874 42555 transmembrane_helix
ID metaerg.pl|10560
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology i42873-42941o42951-43010i43071-43139o43152-43220i43323-43391o43419-43487i43506-43574o43695-43763i43776-43844o;
44012 45961 CDS
ID metaerg.pl|10561
allec_ids 6.1.1.3;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0046872; GO:0004829; GO:0000049; GO:0006435;
allko_ids K01868;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480698.1 1 648 evalue:0.0e+00 qcov:99.80 identity:88.70;
kegg_pathway_id 00970; 00260;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Glycine, serine and threonine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03129; PF02824; PF00587; PF07973;
pfam_desc Anticodon binding domain; TGS domain; tRNA synthetase class II core domain (G, H, P, S and T); Threonyl and Alanyl tRNA synthetase second additional domain;
pfam_id HGTP_anticodon; TGS; tRNA-synt_2b; tRNA_SAD;
pfam_target db:Pfam-A.hmm|PF03129.20 evalue:1.1e-18 score:66.3 best_domain_score:63.9 name:HGTP_anticodon; db:Pfam-A.hmm|PF02824.21 evalue:2e-09 score:36.6 best_domain_score:35.3 name:TGS; db:Pfam-A.hmm|PF00587.25 evalue:2.8e-38 score:130.9 best_domain_score:130.1 name:tRNA-synt_2b; db:Pfam-A.hmm|PF07973.14 evalue:8.9e-11 score:41.0 best_domain_score:39.9 name:tRNA_SAD;
sprot_desc Threonine--tRNA ligase;
sprot_id sp|Q5LTX8|SYT_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LTX8|SYT_RUEPO 1 647 evalue:0.0e+00 qcov:99.70 identity:82.40;
tigrfam_acc TIGR00418;
tigrfam_desc threonine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name thrS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00418 evalue:3.1e-197 score:656.1 best_domain_score:655.9 name:TIGR00418;
46919 46062 CDS
ID metaerg.pl|10562
allgo_ids GO:0015035;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386217.1 1 285 evalue:7.0e-98 qcov:100.00 identity:66.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF01323; PF18312; PF13098; PF13462;
pfam_desc DSBA-like thioredoxin domain; Copper resistance protein ScsC N-terminal domain; Thioredoxin-like domain; Thioredoxin;
pfam_id DSBA; ScsC_N; Thioredoxin_2; Thioredoxin_4;
pfam_target db:Pfam-A.hmm|PF01323.20 evalue:8.6e-21 score:73.8 best_domain_score:68.9 name:DSBA; db:Pfam-A.hmm|PF18312.1 evalue:3.5e-10 score:38.7 best_domain_score:37.4 name:ScsC_N; db:Pfam-A.hmm|PF13098.6 evalue:5.7e-12 score:45.3 best_domain_score:41.7 name:Thioredoxin_2; db:Pfam-A.hmm|PF13462.6 evalue:4.8e-19 score:68.3 best_domain_score:67.0 name:Thioredoxin_4;
sp YES;
46062 46157 signal_peptide
ID metaerg.pl|10563
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
47129 48415 CDS
ID metaerg.pl|10564
allec_ids 3.5.1.28;
allgo_ids GO:0008745; GO:0009253; GO:0030288; GO:0071555;
allko_ids K01448; K08307;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_100319155.1 24 428 evalue:5.7e-136 qcov:94.60 identity:65.80;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF01520; PF11741;
pfam_desc N-acetylmuramoyl-L-alanine amidase; AMIN domain;
pfam_id Amidase_3; AMIN;
pfam_target db:Pfam-A.hmm|PF01520.18 evalue:1.8e-41 score:141.4 best_domain_score:140.7 name:Amidase_3; db:Pfam-A.hmm|PF11741.8 evalue:9.2e-06 score:25.0 best_domain_score:24.1 name:AMIN;
sp YES;
sprot_desc N-acetylmuramoyl-L-alanine amidase AmiC;
sprot_id sp|Q9K0V3|AMIC_NEIMB;
sprot_target db:uniprot_sprot|sp|Q9K0V3|AMIC_NEIMB 62 413 evalue:1.9e-32 qcov:82.20 identity:32.40;
tm_num 1;
47129 47266 signal_peptide
ID metaerg.pl|10565
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
47129 48415 transmembrane_helix
ID metaerg.pl|10566
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology i47189-47257o;
48539 51064 CDS
ID metaerg.pl|10567
allec_ids 2.4.1.129; 3.4.16.4;
allgo_ids GO:0008658; GO:0016021; GO:0005886; GO:0008955; GO:0009002; GO:0071555; GO:0009252; GO:0008360; GO:0046677;
allko_ids K03814; K12555; K03587; K05364; K08384; K05365; K08884; K05367; K08282; K05366; K04478;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796943.1 1 841 evalue:0.0e+00 qcov:100.00 identity:88.80;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metacyc_pathway_id PWY-6470; PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-5265; PWY-6385;
metacyc_pathway_name peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis III (mycobacteria);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF17092; PF00912; PF00905;
pfam_desc Penicillin-binding protein OB-like domain; Transglycosylase; Penicillin binding protein transpeptidase domain;
pfam_id PCB_OB; Transgly; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF17092.5 evalue:1.5e-14 score:54.0 best_domain_score:53.1 name:PCB_OB; db:Pfam-A.hmm|PF00912.22 evalue:7.8e-59 score:197.3 best_domain_score:196.8 name:Transgly; db:Pfam-A.hmm|PF00905.22 evalue:9.7e-35 score:119.4 best_domain_score:116.5 name:Transpeptidase;
sprot_desc Penicillin-binding protein 1A;
sprot_id sp|Q1RKC5|PBPA_RICBR;
sprot_target db:uniprot_sprot|sp|Q1RKC5|PBPA_RICBR 30 769 evalue:7.8e-152 qcov:88.00 identity:40.50;
tigrfam_acc TIGR02074;
tigrfam_desc penicillin-binding protein, 1A family;
tigrfam_mainrole Cell envelope;
tigrfam_name PBP_1a_fam;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR02074 evalue:1.3e-175 score:584.4 best_domain_score:584.2 name:TIGR02074;
tm_num 1;
48539 51064 transmembrane_helix
ID metaerg.pl|10568
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology i48572-48640o;
51146 52273 CDS
ID metaerg.pl|10569
allgo_ids GO:0006415; GO:0005737; GO:0016149;
allko_ids K02836;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796944.1 1 375 evalue:4.3e-196 qcov:100.00 identity:93.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF03462; PF00472;
pfam_desc PCRF domain; RF-1 domain;
pfam_id PCRF; RF-1;
pfam_target db:Pfam-A.hmm|PF03462.18 evalue:7.2e-56 score:188.3 best_domain_score:188.3 name:PCRF; db:Pfam-A.hmm|PF00472.20 evalue:6.4e-39 score:131.7 best_domain_score:130.8 name:RF-1;
sprot_desc Peptide chain release factor 2;
sprot_id sp|Q165J6|RF2_ROSDO;
sprot_target db:uniprot_sprot|sp|Q165J6|RF2_ROSDO 1 374 evalue:4.9e-154 qcov:99.70 identity:73.30;
tigrfam_acc TIGR00020;
tigrfam_desc peptide chain release factor 2;
tigrfam_mainrole Protein synthesis;
tigrfam_name prfB;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00020 evalue:6.4e-148 score:491.7 best_domain_score:491.5 name:TIGR00020;
52384 53157 CDS
ID metaerg.pl|10570
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245879.1 14 255 evalue:5.9e-96 qcov:94.20 identity:77.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF09955;
pfam_desc Predicted integral membrane protein (DUF2189);
pfam_id DUF2189;
pfam_target db:Pfam-A.hmm|PF09955.9 evalue:2.3e-30 score:104.7 best_domain_score:104.7 name:DUF2189;
tm_num 5;
52384 53157 transmembrane_helix
ID metaerg.pl|10571
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology o52489-52557i52576-52644o52732-52800i52837-52941o53020-53115i;
53263 54048 CDS
ID metaerg.pl|10572
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796946.1 5 259 evalue:2.4e-97 qcov:97.70 identity:76.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF09955;
pfam_desc Predicted integral membrane protein (DUF2189);
pfam_id DUF2189;
pfam_target db:Pfam-A.hmm|PF09955.9 evalue:3.8e-33 score:113.6 best_domain_score:113.6 name:DUF2189;
tm_num 6;
53263 54048 transmembrane_helix
ID metaerg.pl|10573
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology o53383-53451i53470-53538o53638-53706i53764-53832o53860-53928i53941-54009o;
54394 55479 CDS
ID metaerg.pl|10574
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657575.1 1 361 evalue:5.5e-148 qcov:100.00 identity:70.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF13403;
pfam_desc Hint domain;
pfam_id Hint_2;
pfam_target db:Pfam-A.hmm|PF13403.6 evalue:1.5e-44 score:151.0 best_domain_score:150.3 name:Hint_2;
55624 56064 CDS
ID metaerg.pl|10575
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796948.1 1 146 evalue:2.5e-43 qcov:100.00 identity:61.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
tm_num 4;
55624 56064 transmembrane_helix
ID metaerg.pl|10576
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology i55642-55710o55798-55866i55885-55953o55981-56034i;
56175 57209 CDS
ID metaerg.pl|10577
allec_ids 2.5.1.-;
allgo_ids GO:0005737; GO:0005739; GO:0004124; GO:0080146; GO:0030170; GO:0006535;
allko_ids K10150; K01738; K01733; K01697; K01754; K13034; K12339;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796949.1 1 343 evalue:6.4e-178 qcov:99.70 identity:90.70;
kegg_pathway_id 00272; 00260; 00290; 00450; 00920; 00750; 00271;
kegg_pathway_name Cysteine metabolism; Glycine, serine and threonine metabolism; Valine, leucine and isoleucine biosynthesis; Selenoamino acid metabolism; Sulfur metabolism; Vitamin B6 metabolism; Methionine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metacyc_pathway_id PWY-5861; PWY-724; PWY-6262; POLYISOPRENSYN-PWY; PWY-5805; PWY-5783; PWY-5132; PWY-5897; PWY-5808; PWY-6263; PWY-5816; PWY-5863; PWY-5898; PWY-5068; PWY-2681; PWY-5896; PWY-5845; PWY-5862; PWY-5140; PWY-5701; PWY-6404; PWY-5806; PWY-5135; PWY-5899; PWY-5838; PWY-5064; PWY-4502; PWY-5134; PWY-6520; PWY-5817; PWY-6403; PWY-5133; PWY-5864; PWY-6129; PWY-6383; PWY-5893; PWY-5027;
metacyc_pathway_name superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; demethylmenaquinol-8 biosynthesis II;; polyisoprenoid biosynthesis (E. coli);; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; lupulone and humulone biosynthesis;; superpathway of menaquinol-11 biosynthesis;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-12 biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; cannabinoid biosynthesis;; shikonin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; xanthohumol biosynthesis;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; tridecaprenyl diphosphate biosynthesis;; phylloquinol biosynthesis;;
metacyc_pathway_type Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; PRENYLFLAVONOID-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:3.4e-62 score:209.7 best_domain_score:209.5 name:PALP;
sprot_desc Cysteine synthase 1;
sprot_id sp|Q7RYW6|CYSK_NEUCR;
sprot_target db:uniprot_sprot|sp|Q7RYW6|CYSK_NEUCR 7 332 evalue:3.4e-93 qcov:94.80 identity:54.60;
57223 59670 CDS
ID metaerg.pl|10578
allgo_ids GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796950.1 1 812 evalue:0.0e+00 qcov:99.60 identity:76.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF12607; PF00924;
pfam_desc Protein of unknown function (DUF3772); Mechanosensitive ion channel;
pfam_id DUF3772; MS_channel;
pfam_target db:Pfam-A.hmm|PF12607.8 evalue:1.2e-10 score:40.2 best_domain_score:40.2 name:DUF3772; db:Pfam-A.hmm|PF00924.18 evalue:3e-52 score:176.4 best_domain_score:176.4 name:MS_channel;
sp YES;
tm_num 11;
57223 57288 signal_peptide
ID metaerg.pl|10579
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
57223 59670 transmembrane_helix
ID metaerg.pl|10580
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology o57832-57885i57952-58020o58063-58119i58192-58260o58288-58356i58417-58485o58498-58557i58618-58686o58756-58824i58885-58953o58963-59031i;
60530 59682 CDS
ID metaerg.pl|10581
allec_ids 4.3.2.3;
allgo_ids GO:0003824; GO:0046872; GO:0050385; GO:0009117; GO:0019628;
allko_ids K01555; K16856;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245953.1 1 280 evalue:3.4e-113 qcov:99.30 identity:75.00;
kegg_pathway_id 00643; 00350;
kegg_pathway_name Styrene degradation; Tyrosine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metacyc_pathway_id URDEGR-PWY;
metacyc_pathway_name superpathway of allantoin degradation in plants;;
metacyc_pathway_type Allantoin-degradation; Super-Pathways;;
pfam_acc PF01557;
pfam_desc Fumarylacetoacetate (FAA) hydrolase family;
pfam_id FAA_hydrolase;
pfam_target db:Pfam-A.hmm|PF01557.18 evalue:8.5e-69 score:230.8 best_domain_score:230.5 name:FAA_hydrolase;
sprot_desc Ureidoglycolate lyase;
sprot_id sp|A9ALD1|UGL_BURM1;
sprot_target db:uniprot_sprot|sp|A9ALD1|UGL_BURM1 1 280 evalue:2.7e-80 qcov:99.30 identity:55.90;
61042 60554 CDS
ID metaerg.pl|10582
allgo_ids GO:0008565; GO:0015627; GO:0015628;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797086.1 10 162 evalue:2.3e-69 qcov:94.40 identity:86.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF12019; PF00582;
pfam_desc Type II transport protein GspH; Universal stress protein family;
pfam_id GspH; Usp;
pfam_target db:Pfam-A.hmm|PF12019.8 evalue:6.7e-05 score:22.5 best_domain_score:22.1 name:GspH; db:Pfam-A.hmm|PF00582.26 evalue:2.9e-11 score:43.3 best_domain_score:43.2 name:Usp;
61779 61075 CDS
ID metaerg.pl|10583
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0000156; GO:0006355;
allko_ids K11357; K10125; K04757; K13761; K02486; K12767; K07675; K07647; K10681; K07676; K06379; K07644; K07709; K07636; K07653; K07638; K02480; K02482; K10715; K11527; K08479; K03388; K02668; K07710; K07716; K02489; K08282; K01937; K07708; K07677; K02491; K11231; K07642; K11711; K11640; K11356; K02484; K07768; K11354; K07778; K07651; K07648; K07679; K07637; K03407; K07682; K07654; K07652; K01120; K07673; K07639; K07646; K07641;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796951.1 1 234 evalue:4.3e-109 qcov:100.00 identity:87.60;
kegg_pathway_id 00240; 00790; 00230; 03090; 04011; 02020;
kegg_pathway_name Pyrimidine metabolism; Folate biosynthesis; Purine metabolism; Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:9.1e-24 score:83.0 best_domain_score:82.6 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:1.4e-18 score:66.0 best_domain_score:63.9 name:Trans_reg_C;
sprot_desc Regulatory protein VirG;
sprot_id sp|P07545|VIRG_AGRFC;
sprot_target db:uniprot_sprot|sp|P07545|VIRG_AGRFC 5 231 evalue:2.3e-37 qcov:97.00 identity:41.00;
63701 61776 CDS
ID metaerg.pl|10584
allgo_ids GO:0000160;
allko_ids K07642; K11711; K04486; K11640; K02484; K07704; K08282; K07677; K07645; K07708; K02491; K07643; K11231; K03407; K07637; K07654; K07682; K07649; K07652; K07641; K13598; K07646; K08475; K07639; K07673; K07711; K00873; K08884; K13533; K07778; K07683; K07768; K07651; K07718; K07698; K07679; K02478; K07648; K06379; K10681; K07676; K01769; K07644; K07709; K13532; K04757; K10125; K02342; K11357; K12767; K02486; K11383; K07769; K07675; K07717; K07680; K07647; K10942; K13040; K08479; K07674; K10916; K02668; K03388; K07640; K07710; K07656; K01768; K02489; K07697; K07716; K07638; K07653; K07636; K02482; K08801; K02480; K10715; K07678; K02030; K11527; K13587;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796952.1 1 638 evalue:8.2e-280 qcov:99.50 identity:81.20;
kegg_pathway_id 00790; 00340; 02020; 04011; 00620; 03090; 05111; 00230; 03030; 00710; 00010;
kegg_pathway_name Folate biosynthesis; Histidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system; Vibrio cholerae pathogenic cycle; Purine metabolism; DNA replication; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF02518; PF08448; PF12860; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; PAS fold; Response regulator receiver domain;
pfam_id HATPase_c; PAS_4; PAS_7; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:2.1e-13 score:50.0 best_domain_score:48.8 name:HATPase_c; db:Pfam-A.hmm|PF08448.10 evalue:5.1e-11 score:42.0 best_domain_score:27.4 name:PAS_4; db:Pfam-A.hmm|PF12860.7 evalue:3.3e-40 score:136.1 best_domain_score:128.8 name:PAS_7; db:Pfam-A.hmm|PF00072.24 evalue:8.2e-09 score:34.9 best_domain_score:33.9 name:Response_reg;
63897 65876 CDS
ID metaerg.pl|10585
allec_ids 6.2.1.3;
allgo_ids GO:0003824; GO:0003996; GO:0005524; GO:0102391; GO:0004467; GO:0006633;
allko_ids K01586; K05939; K02364; K00992; K01779; K01776; K03367; K00143; K01652; K01897; K01784; K01895; K01904; K01909;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797087.1 16 659 evalue:0.0e+00 qcov:97.70 identity:92.60;
kegg_pathway_id 00770; 01053; 00010; 00310; 00564; 00290; 00052; 00660; 00471; 00071; 00473; 00251; 00252; 00940; 00520; 00720; 00650; 00640; 00300; 00620;
kegg_pathway_name Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; Glycolysis / Gluconeogenesis; Lysine degradation; Glycerophospholipid metabolism; Valine, leucine and isoleucine biosynthesis; Galactose metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid metabolism; D-Alanine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Phenylpropanoid biosynthesis; Nucleotide sugars metabolism; Reductive carboxylate cycle (CO2 fixation); Butanoate metabolism; Propanoate metabolism; Lysine biosynthesis; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metacyc_pathway_id PWY-561; PWY-6000; PWY-6001; PWY-5136; PWY-5995; P221-PWY; PWY-5143; PWY-5972; FAO-PWY;
metacyc_pathway_name superpathway of glyoxylate cycle and fatty acid degradation;; γ-linolenate biosynthesis II (animals);; linoleate biosynthesis II (animals);; fatty acid β-oxidation II (peroxisome);; linoleate biosynthesis I (plants);; octane oxidation;; long-chain fatty acid activation;; stearate biosynthesis I (animals and fungi);; fatty acid β-oxidation I;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Gamma-linolenate-Biosynthesis;; Linoleate-Biosynthesis;; Fatty-Acid-Degradation;; Linoleate-Biosynthesis;; Other-Degradation;; Activation; Lipid-Biosynthesis;; Stearate-Biosynthesis;; Fatty-Acid-Degradation;;
pfam_acc PF00501;
pfam_desc AMP-binding enzyme;
pfam_id AMP-binding;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:4.8e-84 score:281.6 best_domain_score:281.4 name:AMP-binding;
sprot_desc Long-chain-fatty-acid--CoA ligase FadD15;
sprot_id sp|Q7TYX8|FAC15_MYCBO;
sprot_target db:uniprot_sprot|sp|Q7TYX8|FAC15_MYCBO 4 616 evalue:2.6e-65 qcov:93.00 identity:31.00;
65990 66919 CDS
ID metaerg.pl|10586
allgo_ids GO:0008168;
allko_ids K00568; K00599;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Neorhizobium;s__Neorhizobium sp900469955;
genomedb_acc GCA_900469955.1;
genomedb_target db:genomedb|GCA_900469955.1|UBYX01000004.1_20 9 306 evalue:1.0e-97 qcov:96.40 identity:58.80;
kegg_pathway_id 00450; 00626; 00350; 00130; 00340; 00380; 00150;
kegg_pathway_name Selenoamino acid metabolism; Naphthalene and anthracene degradation; Tyrosine metabolism; Ubiquinone biosynthesis; Histidine metabolism; Tryptophan metabolism; Androgen and estrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF02353; PF08241; PF08242; PF13489; PF13649; PF13847; PF07021;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methionine biosynthesis protein MetW;
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; MetW;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:0.00022 score:19.8 best_domain_score:19.2 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:1.5e-19 score:69.7 best_domain_score:68.6 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1.4e-09 score:37.8 best_domain_score:36.9 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:9.1e-12 score:44.3 best_domain_score:43.9 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:5e-13 score:48.8 best_domain_score:47.9 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.3e-08 score:34.0 best_domain_score:32.9 name:Methyltransf_31; db:Pfam-A.hmm|PF07021.12 evalue:0.00017 score:20.5 best_domain_score:19.9 name:MetW;
66924 67757 CDS
ID metaerg.pl|10587
allgo_ids GO:0005524; GO:0016887; GO:0006865;
allko_ids K02023; K02000; K11962; K01998; K10111; K02049; K01995; K05816; K01996; K06861; K02071; K11072; K02045; K02006; K02052; K02010; K01997; K02017;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796953.1 1 277 evalue:1.1e-143 qcov:100.00 identity:91.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00005; PF12399;
pfam_desc ABC transporter; Branched-chain amino acid ATP-binding cassette transporter;
pfam_id ABC_tran; BCA_ABC_TP_C;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:2.1e-31 score:108.5 best_domain_score:108.1 name:ABC_tran; db:Pfam-A.hmm|PF12399.8 evalue:1.5e-10 score:40.0 best_domain_score:39.2 name:BCA_ABC_TP_C;
sprot_desc High-affinity branched-chain amino acid transport ATP-binding protein LivG;
sprot_id sp|P0A194|LIVG_SALTI;
sprot_target db:uniprot_sprot|sp|P0A194|LIVG_SALTI 26 275 evalue:8.6e-47 qcov:90.30 identity:35.20;
67784 68770 CDS
ID metaerg.pl|10588
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0006865;
allko_ids K01997; K01995; K01998;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796954.1 1 328 evalue:4.6e-170 qcov:100.00 identity:95.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:1.1e-26 score:92.8 best_domain_score:92.5 name:BPD_transp_2;
sprot_desc High-affinity branched-chain amino acid transport system permease protein LivH;
sprot_id sp|P0AEX8|LIVH_ECO57;
sprot_target db:uniprot_sprot|sp|P0AEX8|LIVH_ECO57 1 328 evalue:2.7e-23 qcov:100.00 identity:26.60;
tm_num 8;
67784 68770 transmembrane_helix
ID metaerg.pl|10589
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology o67811-67879i67898-67966o68024-68092i68129-68197o68303-68362i68444-68512o68555-68623i68657-68725o;
68775 69851 CDS
ID metaerg.pl|10590
allgo_ids GO:0016020; GO:0022857; GO:0055085;
allko_ids K01995; K01998; K06861;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480728.1 1 358 evalue:2.9e-189 qcov:100.00 identity:96.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:2.2e-30 score:105.0 best_domain_score:104.7 name:BPD_transp_2;
tm_num 9;
68775 69851 transmembrane_helix
ID metaerg.pl|10591
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology o68853-68921i68940-69008o69075-69143i69162-69230o69315-69383i69474-69542o69585-69638i69642-69710o69738-69806i;
69900 71192 CDS
ID metaerg.pl|10592
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_100319259.1 3 430 evalue:2.3e-238 qcov:99.50 identity:92.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF13458;
pfam_desc Periplasmic binding protein;
pfam_id Peripla_BP_6;
pfam_target db:Pfam-A.hmm|PF13458.6 evalue:8.6e-73 score:245.2 best_domain_score:244.9 name:Peripla_BP_6;
sp YES;
69900 69965 signal_peptide
ID metaerg.pl|10593
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
71258 72082 CDS
ID metaerg.pl|10594
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015658; GO:0042941; GO:0015808;
allko_ids K10111; K01998; K01995; K11962; K02023; K02052; K02006; K02010; K01997; K02045; K01996; K06861;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469627.1 1 274 evalue:5.3e-143 qcov:100.00 identity:95.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF13304; PF09818; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; Predicted ATPase of the ABC class; ABC transporter;
pfam_id AAA_21; ABC_ATPase; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.2e-10 score:41.0 best_domain_score:20.7 name:AAA_21; db:Pfam-A.hmm|PF09818.9 evalue:4.3e-05 score:21.7 best_domain_score:16.0 name:ABC_ATPase; db:Pfam-A.hmm|PF00005.27 evalue:2.7e-25 score:88.7 best_domain_score:88.2 name:ABC_tran;
sprot_desc High-affinity branched-chain amino acid transport ATP-binding protein BraG;
sprot_id sp|P21630|BRAG_PSEAE;
sprot_target db:uniprot_sprot|sp|P21630|BRAG_PSEAE 11 251 evalue:3.7e-50 qcov:88.00 identity:47.30;
72102 73343 CDS
ID metaerg.pl|10595
allgo_ids GO:0003824;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797088.1 9 413 evalue:3.1e-203 qcov:98.10 identity:86.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00501;
pfam_desc AMP-binding enzyme;
pfam_id AMP-binding;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:4.5e-10 score:37.9 best_domain_score:37.3 name:AMP-binding;
73381 75045 CDS
ID metaerg.pl|10596
allko_ids K01448; K01447; K01449;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657577.1 2 553 evalue:1.3e-204 qcov:99.60 identity:69.40;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF01471; PF08823;
pfam_desc Putative peptidoglycan binding domain; Putative peptidoglycan binding domain;
pfam_id PG_binding_1; PG_binding_2;
pfam_target db:Pfam-A.hmm|PF01471.18 evalue:6.1e-24 score:83.2 best_domain_score:42.7 name:PG_binding_1; db:Pfam-A.hmm|PF08823.11 evalue:5.7e-06 score:25.8 best_domain_score:16.3 name:PG_binding_2;
sp YES;
73381 73440 signal_peptide
ID metaerg.pl|10597
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
76108 75068 CDS
ID metaerg.pl|10598
allec_ids 4.1.2.48;
allgo_ids GO:0006520; GO:0016829; GO:0004793; GO:0006567;
allko_ids K01620;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798967.1 1 342 evalue:4.6e-152 qcov:98.80 identity:77.20;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF01212;
pfam_desc Beta-eliminating lyase;
pfam_id Beta_elim_lyase;
pfam_target db:Pfam-A.hmm|PF01212.21 evalue:7.7e-54 score:182.2 best_domain_score:181.7 name:Beta_elim_lyase;
sprot_desc Low specificity L-threonine aldolase;
sprot_id sp|O50584|LTAE_PSEUN;
sprot_target db:uniprot_sprot|sp|O50584|LTAE_PSEUN 3 335 evalue:1.3e-57 qcov:96.20 identity:38.50;
76537 76199 CDS
ID metaerg.pl|10599
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Variibacter;s__Variibacter gotjawalensis;
genomedb_acc GCF_002355335.1;
genomedb_target db:genomedb|GCF_002355335.1|WP_096353056.1 1 112 evalue:1.8e-20 qcov:100.00 identity:45.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
sp YES;
76199 76276 signal_peptide
ID metaerg.pl|10600
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
77831 76548 CDS
ID metaerg.pl|10601
allec_ids 1.8.3.1;
allgo_ids GO:0016491; GO:0030151; GO:0055114; GO:0005758; GO:0005739; GO:0020037; GO:0043546; GO:0008482; GO:0042128; GO:0006790;
allko_ids K00387; K10534; K05301; K02016; K00360;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Hyphomicrobiaceae;g__Ga0077555;s__Ga0077555 sp900117415;
genomedb_acc GCF_900117415.1;
genomedb_target db:genomedb|GCF_900117415.1|WP_072392713.1 19 426 evalue:2.1e-162 qcov:95.60 identity:65.00;
kegg_pathway_id 00910; 00920; 02010;
kegg_pathway_name Nitrogen metabolism; Sulfur metabolism; ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
metacyc_pathway_id PWY-5328; PWY-5326;
metacyc_pathway_name superpathway of L-methionine salvage and degradation;; sulfite oxidation IV;;
metacyc_pathway_type METHIONINE-DEG; Super-Pathways;; Sulfite-Oxidation;;
pfam_acc PF03404; PF00174;
pfam_desc Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain;
pfam_id Mo-co_dimer; Oxidored_molyb;
pfam_target db:Pfam-A.hmm|PF03404.16 evalue:6.1e-17 score:61.2 best_domain_score:60.5 name:Mo-co_dimer; db:Pfam-A.hmm|PF00174.19 evalue:3e-48 score:162.9 best_domain_score:162.3 name:Oxidored_molyb;
sp YES;
sprot_desc Sulfite oxidase;
sprot_id sp|P07850|SUOX_CHICK;
sprot_target db:uniprot_sprot|sp|P07850|SUOX_CHICK 66 421 evalue:7.0e-40 qcov:83.40 identity:31.80;
76548 76709 signal_peptide
ID metaerg.pl|10602
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
78008 78565 CDS
ID metaerg.pl|10603
allgo_ids GO:0005506; GO:0016226; GO:0051536; GO:0005739;
allko_ids K22074;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798969.1 1 185 evalue:9.9e-93 qcov:100.00 identity:90.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF08712; PF01106;
pfam_desc Scaffold protein Nfu/NifU N terminal; NifU-like domain;
pfam_id Nfu_N; NifU;
pfam_target db:Pfam-A.hmm|PF08712.11 evalue:1.8e-34 score:116.9 best_domain_score:116.2 name:Nfu_N; db:Pfam-A.hmm|PF01106.17 evalue:2.7e-30 score:103.6 best_domain_score:103.0 name:NifU;
sprot_desc NFU1 iron-sulfur cluster scaffold homolog, mitochondrial;
sprot_id sp|B4IMF6|NFU1_DROSE;
sprot_target db:uniprot_sprot|sp|B4IMF6|NFU1_DROSE 1 183 evalue:9.1e-53 qcov:98.90 identity:54.90;
78555 79199 CDS
ID metaerg.pl|10604
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__UBA996;s__UBA996 sp002291955;
genomedb_acc GCA_002291955.1;
genomedb_target db:genomedb|GCA_002291955.1|DBBA01000142.1_9 1 214 evalue:1.0e-61 qcov:100.00 identity:65.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00814;
pfam_desc Glycoprotease family;
pfam_id Peptidase_M22;
pfam_target db:Pfam-A.hmm|PF00814.25 evalue:2.8e-17 score:62.5 best_domain_score:61.8 name:Peptidase_M22;
tigrfam_acc TIGR03725;
tigrfam_desc tRNA threonylcarbamoyl adenosine modification protein YeaZ;
tigrfam_mainrole Protein synthesis;
tigrfam_name T6A_YeaZ;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03725 evalue:5.6e-46 score:156.3 best_domain_score:156.1 name:TIGR03725;
79196 79624 CDS
ID metaerg.pl|10605
allec_ids 2.3.1.128;
allgo_ids GO:0016747;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469684.1 1 139 evalue:1.1e-35 qcov:97.90 identity:59.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF00583; PF13673; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:2.1e-12 score:46.5 best_domain_score:46.3 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:9.3e-07 score:28.1 best_domain_score:27.8 name:Acetyltransf_10; db:Pfam-A.hmm|PF08445.10 evalue:3e-06 score:26.4 best_domain_score:25.8 name:FR47;
tigrfam_acc TIGR01575;
tigrfam_desc ribosomal-protein-alanine acetyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name rimI;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01575 evalue:6.4e-25 score:87.0 best_domain_score:86.7 name:TIGR01575;
79775 80764 CDS
ID metaerg.pl|10606
allgo_ids GO:0005886;
allko_ids K07335;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798975.1 1 329 evalue:8.0e-154 qcov:100.00 identity:84.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF02608;
pfam_desc ABC transporter substrate-binding protein PnrA-like;
pfam_id Bmp;
pfam_target db:Pfam-A.hmm|PF02608.14 evalue:2.1e-53 score:180.5 best_domain_score:180.2 name:Bmp;
sp YES;
sprot_desc Uncharacterized lipoprotein YufN;
sprot_id sp|O05252|YUFN_BACSU;
sprot_target db:uniprot_sprot|sp|O05252|YUFN_BACSU 26 313 evalue:1.2e-31 qcov:87.50 identity:33.00;
79775 79843 signal_peptide
ID metaerg.pl|10607
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
80771 82336 CDS
ID metaerg.pl|10608
allgo_ids GO:0005524; GO:0016887;
allko_ids K10441; K01996; K02071; K06861; K10820; K11072; K02045; K02004; K02006; K02052; K05847; K02056; K02010; K02003; K01997; K02023; K10542; K01990; K11962; K02000; K10539; K10562; K01998; K10545; K10111; K10551; K02049; K01995; K05816;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799292.1 10 521 evalue:5.3e-245 qcov:98.30 identity:85.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.4e-07 score:30.9 best_domain_score:20.1 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.7e-44 score:150.2 best_domain_score:102.7 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YufO;
sprot_id sp|O05253|YUFO_BACSU;
sprot_target db:uniprot_sprot|sp|O05253|YUFO_BACSU 21 519 evalue:4.1e-119 qcov:95.80 identity:46.00;
82333 82791 CDS
ID metaerg.pl|10609
allgo_ids GO:0016020; GO:0022857; GO:0055085;
allko_ids K02057;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798977.1 1 153 evalue:2.8e-69 qcov:100.00 identity:86.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:2e-06 score:26.4 best_domain_score:26.4 name:BPD_transp_2;
tm_num 4;
82333 82791 transmembrane_helix
ID metaerg.pl|10610
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.40099; 196.449; 0.349891; 195.695; 0.00354537;
topology i82369-82437o82495-82563i82597-82656o82669-82737i;
>Feature NODE_78_length_82627_cov_14.3837
869 3 CDS
ID metaerg.pl|10611
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tranquillimonas;s__Tranquillimonas alkanivorans;
genomedb_acc GCF_900115595.1;
genomedb_target db:genomedb|GCF_900115595.1|WP_093425281.1 5 289 evalue:4.2e-74 qcov:98.60 identity:60.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:5.5e-33 score:113.6 best_domain_score:113.6 name:DctM;
tm_num 7;
869 3 transmembrane_helix
ID metaerg.pl|10612
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology o45-113i126-194o237-305i342-410o438-506i567-626o717-785i;
980 1795 CDS
ID metaerg.pl|10613
allgo_ids GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Tranquillimonas;s__Tranquillimonas alkanivorans;
genomedb_acc GCF_900115595.1;
genomedb_target db:genomedb|GCF_900115595.1|WP_093425283.1 4 261 evalue:2.9e-45 qcov:95.20 identity:41.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF09339; PF01614;
pfam_desc IclR helix-turn-helix domain; Bacterial transcriptional regulator;
pfam_id HTH_IclR; IclR;
pfam_target db:Pfam-A.hmm|PF09339.10 evalue:6.9e-14 score:50.6 best_domain_score:49.3 name:HTH_IclR; db:Pfam-A.hmm|PF01614.18 evalue:6.1e-06 score:25.3 best_domain_score:24.1 name:IclR;
1935 2489 CDS
ID metaerg.pl|10614
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter saemankumensis;
genomedb_acc GCF_900100005.1;
genomedb_target db:genomedb|GCF_900100005.1|WP_090030150.1 25 183 evalue:1.1e-59 qcov:86.40 identity:81.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF03773;
pfam_desc Predicted permease;
pfam_id ArsP_1;
pfam_target db:Pfam-A.hmm|PF03773.13 evalue:9.2e-12 score:43.9 best_domain_score:43.5 name:ArsP_1;
tm_num 4;
1935 2489 transmembrane_helix
ID metaerg.pl|10615
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i2115-2183o2226-2294i2328-2396o2409-2477i;
3758 2511 CDS
ID metaerg.pl|10616
allgo_ids GO:0016021; GO:0055085;
allko_ids K08222; K08219;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Haematobacter;s__Haematobacter massiliensis;
genomedb_acc GCF_000740795.1;
genomedb_target db:genomedb|GCF_000740795.1|WP_084684250.1 5 412 evalue:5.3e-195 qcov:98.30 identity:88.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:4.3e-09 score:35.0 best_domain_score:35.0 name:MFS_1;
tm_num 12;
3758 2511 transmembrane_helix
ID metaerg.pl|10617
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i2535-2603o2646-2714i2718-2786o2799-2858i2961-3020o3030-3098i3183-3251o3279-3347i3408-3467o3495-3563i3600-3653o3666-3734i;
4860 3850 CDS
ID metaerg.pl|10618
allec_ids 1.2.1.12; 1.2.1.-;
allgo_ids GO:0016620; GO:0055114; GO:0005737; GO:0004365; GO:0051287; GO:0050661; GO:0006094; GO:0006096;
allko_ids K00134; K10705;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799508.1 1 336 evalue:1.1e-169 qcov:100.00 identity:89.90;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id ANAEROFRUCAT-PWY; PWY-1042; PWY-3801; PWY-5482; P441-PWY; ANAGLYCOLYSIS-PWY; PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; P461-PWY; PWY-5484; PWY-5195; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; GLUCONEO-PWY; PWY-5537; TOLSULFDEG-PWY; P124-PWY; P185-PWY; P41-PWY; P105-PWY; PWY-6537; PWY-5305; PWY-321; 4TOLCARBDEG-PWY; P122-PWY; GLYCOLYSIS-E-D; ANARESP1-PWY; GLYCOLYSIS;
metacyc_pathway_name homolactic fermentation;; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);; pyruvate fermentation to acetate II;; superpathway of N-acetylneuraminate degradation;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; artemisinin and arteannuin B biosynthesis;; 4-hydroxyphenylacetate degradation;; gluconeogenesis I;; pyruvate fermentation to acetate V;; 4-toluenesulfonate degradation I;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; pyruvate fermentation to acetate and (S)-lactate I;; TCA cycle IV (2-oxoglutarate decarboxylase);; 4-aminobutanoate degradation II;; bixin biosynthesis;; cutin biosynthesis;; 4-toluenecarboxylate degradation;; heterolactic fermentation;; superpathway of glycolysis and the Entner-Doudoroff pathway;; ; glycolysis I (from glucose 6-phosphate);;
metacyc_pathway_type Fermentation-to-Lactate; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Pyruvate-Acetate-Fermentation;; CARBOXYLATES-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SESQUITERPENE-LACTONE;; AROMATIC-COMPOUNDS-DEGRADATION;; Gluconeogenesis;; Pyruvate-Acetate-Fermentation; Super-Pathways;; 4-Toluenesulfonate-Degradation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; TCA-VARIANTS;; 4-Aminobutyraye-Degradation;; APOCAROTENOID-SYN;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism; Super-Pathways;; ; GLYCOLYSIS-VARIANTS;;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:2.7e-58 score:195.3 best_domain_score:194.5 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:5e-28 score:96.6 best_domain_score:95.6 name:Gp_dh_N;
sprot_desc Glyceraldehyde-3-phosphate dehydrogenase 3;
sprot_id sp|P58559|G3P3_NOSS1;
sprot_target db:uniprot_sprot|sp|P58559|G3P3_NOSS1 1 336 evalue:2.8e-108 qcov:100.00 identity:60.10;
tigrfam_acc TIGR01534;
tigrfam_desc glyceraldehyde-3-phosphate dehydrogenase, type I;
tigrfam_mainrole Energy metabolism;
tigrfam_name GAPDH-I;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01534 evalue:1.6e-115 score:385.0 best_domain_score:384.8 name:TIGR01534;
5978 4944 CDS
ID metaerg.pl|10619
allgo_ids GO:0016020; GO:0016021; GO:0005886; GO:0015297; GO:0015103; GO:0046685;
allko_ids K03325;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071799509.1 1 344 evalue:2.3e-167 qcov:100.00 identity:93.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF01758; PF13593;
pfam_desc Sodium Bile acid symporter family; SBF-like CPA transporter family (DUF4137);
pfam_id SBF; SBF_like;
pfam_target db:Pfam-A.hmm|PF01758.16 evalue:4.4e-43 score:146.5 best_domain_score:146.5 name:SBF; db:Pfam-A.hmm|PF13593.6 evalue:1.5e-06 score:27.0 best_domain_score:24.7 name:SBF_like;
sprot_desc Arsenical-resistance protein Acr3;
sprot_id sp|A6TP80|ACR3_ALKMQ;
sprot_target db:uniprot_sprot|sp|A6TP80|ACR3_ALKMQ 4 342 evalue:2.7e-90 qcov:98.50 identity:52.30;
tigrfam_acc TIGR00832;
tigrfam_desc arsenical-resistance protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name acr3;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00832 evalue:3.6e-116 score:387.2 best_domain_score:387.0 name:TIGR00832;
tm_num 10;
5978 4944 transmembrane_helix
ID metaerg.pl|10620
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i4962-5030o5073-5141i5178-5246o5283-5351i5385-5453o5481-5549i5586-5654o5697-5765i5802-5870o5880-5948i;
6372 5989 CDS
ID metaerg.pl|10621
allgo_ids GO:0003700; GO:0006355;
casgene_acc COG0640_csa3_CAS-I-A;
casgene_name csa3;
casgene_target db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:4.1e-12 score:45.7 best_domain_score:45.5 name:csa3;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657756.1 18 127 evalue:7.1e-42 qcov:86.60 identity:84.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF12840; PF13412; PF01022; PF12802;
pfam_desc Helix-turn-helix domain; Winged helix-turn-helix DNA-binding; Bacterial regulatory protein, arsR family; MarR family;
pfam_id HTH_20; HTH_24; HTH_5; MarR_2;
pfam_target db:Pfam-A.hmm|PF12840.7 evalue:7.7e-12 score:44.3 best_domain_score:43.0 name:HTH_20; db:Pfam-A.hmm|PF13412.6 evalue:5.9e-07 score:28.2 best_domain_score:27.5 name:HTH_24; db:Pfam-A.hmm|PF01022.20 evalue:1.5e-13 score:49.6 best_domain_score:48.9 name:HTH_5; db:Pfam-A.hmm|PF12802.7 evalue:4.1e-07 score:29.0 best_domain_score:28.0 name:MarR_2;
7678 6704 CDS
ID metaerg.pl|10622
allec_ids 1.6.5.5;
allgo_ids GO:0055114; GO:0005737; GO:0005829; GO:0017091; GO:0003960; GO:0008270; GO:0034599;
allko_ids K00001; K13953; K00344;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Mangrovicoccus;s__Mangrovicoccus sp003254465;
genomedb_acc GCF_003254465.1;
genomedb_target db:genomedb|GCF_003254465.1|WP_111404308.1 2 324 evalue:1.5e-149 qcov:99.70 identity:81.10;
kegg_pathway_id 00071; 00350; 00120; 00010; 00624; 00641;
kegg_pathway_name Fatty acid metabolism; Tyrosine metabolism; Bile acid biosynthesis; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; 3-Chloroacrylic acid degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF08240; PF00107; PF13602;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N; ADH_zinc_N_2;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:9.7e-11 score:40.8 best_domain_score:39.3 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:3.4e-25 score:87.8 best_domain_score:86.5 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:4.4e-22 score:78.8 best_domain_score:77.9 name:ADH_zinc_N_2;
sprot_desc Quinone oxidoreductase;
sprot_id sp|P43903|QOR_PSEAE;
sprot_target db:uniprot_sprot|sp|P43903|QOR_PSEAE 1 324 evalue:1.2e-89 qcov:100.00 identity:54.80;
7801 8559 CDS
ID metaerg.pl|10623
allec_ids 1.-.-.-;
allgo_ids GO:0016491;
allko_ids K12420;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07482.1 2 252 evalue:2.3e-100 qcov:99.60 identity:77.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id PWY-5271; PWY-4302; PWY-2821; PWY-5826; PWY-5479; PWY-5987; PWY-5469; PWYG-321; PWY-6113;
metacyc_pathway_name abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; sesamin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:7.1e-53 score:178.2 best_domain_score:177.9 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:1.5e-44 score:151.6 best_domain_score:151.3 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:2.9e-10 score:39.6 best_domain_score:38.9 name:KR;
sprot_desc Uncharacterized short-chain type dehydrogenase/reductase y4mP;
sprot_id sp|P55575|Y4MP_SINFN;
sprot_target db:uniprot_sprot|sp|P55575|Y4MP_SINFN 8 191 evalue:1.1e-19 qcov:73.00 identity:37.40;
8556 9176 CDS
ID metaerg.pl|10624
allec_ids 4.2.1.149;
allgo_ids GO:0003824; GO:0016836; GO:0009437;
allko_ids K07514; K10527; K01825; K07515; K01692; K00022; K07516; K01782; K15016; K13767; K08299;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE47907.1 1 204 evalue:2.1e-67 qcov:99.00 identity:69.60;
kegg_pathway_id 00280; 00281; 00310; 00380; 00930; 00632; 01040; 00903; 00062; 00650; 00640; 00410; 00592; 00071;
kegg_pathway_name Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Fatty acid elongation in mitochondria; Butanoate metabolism; Propanoate metabolism; beta-Alanine metabolism; alpha-Linolenic acid metabolism; Fatty acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:7e-33 score:113.2 best_domain_score:112.9 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:1.6e-14 score:53.4 best_domain_score:52.8 name:ECH_2;
sprot_desc Carnitinyl-CoA dehydratase;
sprot_id sp|Q8Z9L5|CAID_SALTI;
sprot_target db:uniprot_sprot|sp|Q8Z9L5|CAID_SALTI 8 184 evalue:6.4e-15 qcov:85.90 identity:36.00;
9286 9636 CDS
ID metaerg.pl|10625
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
sp YES;
tm_num 1;
9286 9363 signal_peptide
ID metaerg.pl|10626
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
9286 9636 transmembrane_helix
ID metaerg.pl|10627
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i9304-9363o;
9680 10201 CDS
ID metaerg.pl|10628
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109532709.1 9 158 evalue:2.4e-48 qcov:86.70 identity:64.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF04314;
pfam_desc Copper chaperone PCu(A)C;
pfam_id PCuAC;
pfam_target db:Pfam-A.hmm|PF04314.13 evalue:8.4e-35 score:118.1 best_domain_score:117.8 name:PCuAC;
sp YES;
9680 9748 signal_peptide
ID metaerg.pl|10629
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
11369 10260 CDS
ID metaerg.pl|10630
allec_ids 1.1.1.1; 1.1.1.284 1.1.1.1;
allgo_ids GO:0055114; GO:0005737; GO:0004022; GO:0051903; GO:0008270; GO:0006069; GO:0015945;
allko_ids K00121; K13951; K00055; K00001; K13953; K13952; K07538; K13980;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Tardiphaga;s__Tardiphaga sp900114605;
genomedb_acc GCF_900114605.1;
genomedb_target db:genomedb|GCF_900114605.1|WP_092145491.1 1 369 evalue:5.7e-201 qcov:100.00 identity:91.30;
kegg_pathway_id 00622; 00641; 00010; 00624; 00930; 00632; 00120; 00621; 00071; 00350; 00360; 00680;
kegg_pathway_name Toluene and xylene degradation; 3-Chloroacrylic acid degradation; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; Caprolactam degradation; Benzoate degradation via CoA ligation; Bile acid biosynthesis; Biphenyl degradation; Fatty acid metabolism; Tyrosine metabolism; Phenylalanine metabolism; Methane metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metabolic_acc TIGR02818;
metabolic_process compound:C1 compounds;process:Formaldehyde oxidation;gene:S-(hydroxymethyl)glutathione dehydrogenase;;
metacyc_pathway_id PWY-6333; PWY-5486; ETOH-ACETYLCOA-ANA-PWY; P122-PWY; P161-PWY; PWY66-21; PWY-5057; P441-PWY; PWY-3801; PWY-6028; PWY-5076; PWY-5078; PWY-5079; PWY3O-4108; P601-PWY; PWY-5082; P461-PWY; PWY-3722; FERMENTATION-PWY;
metacyc_pathway_name acetaldehyde biosynthesis I;; pyruvate fermentation to ethanol II;; ethanol degradation I;; heterolactic fermentation;; acetylene degradation (anaerobic);; ethanol degradation II;; L-valine degradation II;; superpathway of N-acetylneuraminate degradation;; sucrose degradation II (sucrose synthase);; acetoin degradation;; L-leucine degradation III;; L-isoleucine degradation II;; L-phenylalanine degradation III;; L-tyrosine degradation III;; (+)-camphor degradation;; L-methionine degradation III;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycine betaine biosynthesis II (Gram-positive bacteria);; mixed acid fermentation;;
metacyc_pathway_type Acetaldehyde-Biosynthesis;; Pyruvate-Ethanol-Fermentation;; Ethanol-Degradation;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Acetate-Formation; Pyruvate-Ethanol-Fermentation;; Ethanol-Degradation;; VALINE-DEG;; CARBOXYLATES-DEG; Super-Pathways;; SUCROSE-DEG;; Carbohydrates-Degradation;; LEUCINE-DEG;; ISOLEUCINE-DEG;; PHENYLALANINE-DEG;; TYROSINE-DEG;; Camphor-Degradation;; METHIONINE-DEG;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Betaine-Biosynthesis;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;;
pfam_acc PF08240; PF00107;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:2.8e-25 score:87.5 best_domain_score:86.5 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:9.2e-23 score:79.9 best_domain_score:79.2 name:ADH_zinc_N;
sprot_desc Alcohol dehydrogenase class-3;
sprot_id sp|P72324|ADHI_RHOS4;
sprot_target db:uniprot_sprot|sp|P72324|ADHI_RHOS4 1 369 evalue:2.6e-176 qcov:100.00 identity:78.70;
tigrfam_acc TIGR02818;
tigrfam_desc S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name adh_III_F_hyde;
tigrfam_sub1role Fermentation;
tigrfam_target db:TIGRFAMs.hmm|TIGR02818 evalue:2.9e-187 score:621.3 best_domain_score:621.1 name:TIGR02818;
11524 12459 CDS
ID metaerg.pl|10631
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06949.1 1 310 evalue:2.7e-135 qcov:99.70 identity:77.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00850;
pfam_desc Histone deacetylase domain;
pfam_id Hist_deacetyl;
pfam_target db:Pfam-A.hmm|PF00850.19 evalue:7e-77 score:258.1 best_domain_score:257.8 name:Hist_deacetyl;
sprot_desc hypothetical protein;
sprot_id sp|P72702|Y245_SYNY3;
sprot_target db:uniprot_sprot|sp|P72702|Y245_SYNY3 14 307 evalue:6.2e-54 qcov:94.50 identity:43.00;
12459 12728 CDS
ID metaerg.pl|10632
allec_ids 3.1.11.6;
allgo_ids GO:0006308; GO:0008855; GO:0009318; GO:0005737;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Erythrobacter_A;s__Erythrobacter_A sp001678665;
genomedb_acc GCF_001678665.1;
genomedb_target db:genomedb|GCF_001678665.1|WP_067613569.1 5 88 evalue:7.7e-19 qcov:94.40 identity:65.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF02609;
pfam_desc Exonuclease VII small subunit;
pfam_id Exonuc_VII_S;
pfam_target db:Pfam-A.hmm|PF02609.16 evalue:6.1e-20 score:70.3 best_domain_score:69.9 name:Exonuc_VII_S;
sprot_desc Exodeoxyribonuclease 7 small subunit;
sprot_id sp|Q8L1H9|EX7S_PARZE;
sprot_target db:uniprot_sprot|sp|Q8L1H9|EX7S_PARZE 14 87 evalue:6.6e-17 qcov:83.10 identity:59.50;
tigrfam_acc TIGR01280;
tigrfam_desc exodeoxyribonuclease VII, small subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name xseB;
tigrfam_sub1role Degradation of DNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR01280 evalue:4e-23 score:80.4 best_domain_score:80.2 name:TIGR01280;
12725 13585 CDS
ID metaerg.pl|10633
allec_ids 2.5.1.10;
allgo_ids GO:0008299; GO:0005829; GO:0004161; GO:0004337; GO:0046872; GO:0045337; GO:0033384;
allko_ids K00795;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06951.1 1 284 evalue:4.9e-107 qcov:99.30 identity:76.80;
kegg_pathway_id 00100; 00900;
kegg_pathway_name Biosynthesis of steroids; Terpenoid biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id PWY-5910; POLYISOPRENSYN-PWY; PWY-6146; PWY-5123; PWY-5121;
metacyc_pathway_name superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; polyisoprenoid biosynthesis (E. coli);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; trans, trans-farnesyl diphosphate biosynthesis;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);;
metacyc_pathway_type DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis; Super-Pathways;; Biosynthesis; Super-Pathways;; All-Trans-Farnesyl-PP-Biosynthesis;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:2.3e-45 score:153.9 best_domain_score:153.7 name:polyprenyl_synt;
sprot_desc Farnesyl diphosphate synthase;
sprot_id sp|P22939|ISPA_ECOLI;
sprot_target db:uniprot_sprot|sp|P22939|ISPA_ECOLI 1 286 evalue:1.3e-42 qcov:100.00 identity:43.70;
13599 15545 CDS
ID metaerg.pl|10634
allec_ids 2.2.1.7;
allgo_ids GO:0008661; GO:0016114; GO:0000287; GO:0030976; GO:0052865; GO:0009228;
allko_ids K00615; K01662;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06952.1 1 644 evalue:0.0e+00 qcov:99.40 identity:85.40;
kegg_pathway_id 00030; 00710; 01051; 00100;
kegg_pathway_name Pentose phosphate pathway; Carbon fixation in photosynthetic organisms; Biosynthesis of ansamycins; Biosynthesis of steroids;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id PYRIDOXSYN-PWY; PWY-6270; THISYN-PWY; NONMEVIPP-PWY; PWY0-845; PWY-5121;
metacyc_pathway_name pyridoxal 5'-phosphate biosynthesis I;; isoprene biosynthesis I;; superpathway of thiamine diphosphate biosynthesis I;; methylerythritol phosphate pathway I;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);;
metacyc_pathway_type Vitamin-B6-Biosynthesis;; ISOPRENOIDS; Super-Pathways;; Super-Pathways; Thiamine-Biosynthesis;; MEP-Pathways;; Super-Pathways; Vitamin-B6-Biosynthesis;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;;
pfam_acc PF13292; PF02780; PF02779;
pfam_desc 1-deoxy-D-xylulose-5-phosphate synthase; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain;
pfam_id DXP_synthase_N; Transketolase_C; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF13292.6 evalue:6.6e-113 score:375.7 best_domain_score:374.8 name:DXP_synthase_N; db:Pfam-A.hmm|PF02780.20 evalue:7.6e-29 score:99.4 best_domain_score:98.4 name:Transketolase_C; db:Pfam-A.hmm|PF02779.24 evalue:9.2e-36 score:122.4 best_domain_score:121.4 name:Transket_pyr;
sprot_desc 1-deoxy-D-xylulose-5-phosphate synthase;
sprot_id sp|Q5LX42|DXS_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LX42|DXS_RUEPO 3 644 evalue:5.2e-305 qcov:99.10 identity:82.70;
tigrfam_acc TIGR00204;
tigrfam_desc 1-deoxy-D-xylulose-5-phosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name dxs;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00204 evalue:1.7e-230 score:765.9 best_domain_score:765.7 name:TIGR00204;
15574 17091 CDS
ID metaerg.pl|10635
allec_ids 3.2.2.4;
allgo_ids GO:0003824; GO:0009116; GO:0008714; GO:0044209;
allko_ids K01241;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE48133.1 18 505 evalue:5.4e-218 qcov:96.60 identity:78.30;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id SALVADEHYPOX-PWY;
metacyc_pathway_name adenosine nucleotides degradation II;;
metacyc_pathway_type Adenosine-Nucleotides-Degradation;;
pfam_acc PF10423; PF01048;
pfam_desc Bacterial AMP nucleoside phosphorylase N-terminus ; Phosphorylase superfamily;
pfam_id AMNp_N; PNP_UDP_1;
pfam_target db:Pfam-A.hmm|PF10423.9 evalue:5e-47 score:158.6 best_domain_score:157.0 name:AMNp_N; db:Pfam-A.hmm|PF01048.20 evalue:1.9e-15 score:56.0 best_domain_score:53.9 name:PNP_UDP_1;
sprot_desc AMP nucleosidase;
sprot_id sp|P0AE13|AMN_ECO57;
sprot_target db:uniprot_sprot|sp|P0AE13|AMN_ECO57 35 504 evalue:8.1e-112 qcov:93.10 identity:48.10;
tigrfam_acc TIGR01717;
tigrfam_desc AMP nucleosidase;
tigrfam_name AMP-nucleosdse;
tigrfam_target db:TIGRFAMs.hmm|TIGR01717 evalue:5.1e-194 score:644.7 best_domain_score:644.5 name:TIGR01717;
17303 17590 CDS
ID metaerg.pl|10636
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469330.1 2 95 evalue:1.8e-34 qcov:98.90 identity:86.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00216;
pfam_desc Bacterial DNA-binding protein;
pfam_id Bac_DNA_binding;
pfam_target db:Pfam-A.hmm|PF00216.21 evalue:2.7e-25 score:87.6 best_domain_score:87.5 name:Bac_DNA_binding;
21502 17723 CDS
ID metaerg.pl|10637
allec_ids 2.1.1.13;
allgo_ids GO:0031419; GO:0046872; GO:0005829; GO:0008705; GO:0008270; GO:0042558;
allko_ids K16177; K01844; K14081; K16179; K14084; K00548;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Defluviimonas_B;s__Defluviimonas_B alba;
genomedb_acc GCF_001620265.1;
genomedb_target db:genomedb|GCF_001620265.1|WP_066814375.1 4 1245 evalue:0.0e+00 qcov:98.60 identity:76.10;
kegg_pathway_id 00670; 00310; 00271;
kegg_pathway_name One carbon pool by folate; Lysine degradation; Methionine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id PWY0-781; MET-SAM-PWY; 1CMET2-PWY; HSERMETANA-PWY; ADENOSYLHOMOCYSCAT-PWY; PWY-2201; PWY-5328; METSYN-PWY; PWY-3841; PWY-5345; HOMOSER-METSYN-PWY; P4-PWY; PWY-5347;
metacyc_pathway_name aspartate superpathway;; superpathway of S-adenosyl-L-methionine biosynthesis;; N10-formyl-tetrahydrofolate biosynthesis;; L-methionine biosynthesis III;; L-methionine salvage from L-homocysteine;; folate transformations I;; superpathway of L-methionine salvage and degradation;; superpathway of L-homoserine and L-methionine biosynthesis;; folate transformations II;; superpathway of L-methionine biosynthesis (by sulfhydrylation);; L-methionine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-methionine biosynthesis (transsulfuration);;
metacyc_pathway_type Super-Pathways;; Super-Pathways;; Folate-Biosynthesis;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-Salvage;; Folate-Transformations;; METHIONINE-DEG; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Folate-Transformations;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;;
pfam_acc PF02310; PF02607; PF02965; PF00809; PF02574;
pfam_desc B12 binding domain; B12 binding domain; Vitamin B12 dependent methionine synthase, activation domain; Pterin binding enzyme; Homocysteine S-methyltransferase;
pfam_id B12-binding; B12-binding_2; Met_synt_B12; Pterin_bind; S-methyl_trans;
pfam_target db:Pfam-A.hmm|PF02310.19 evalue:3.1e-20 score:71.6 best_domain_score:69.2 name:B12-binding; db:Pfam-A.hmm|PF02607.17 evalue:9.1e-26 score:89.3 best_domain_score:87.1 name:B12-binding_2; db:Pfam-A.hmm|PF02965.17 evalue:8.1e-118 score:392.0 best_domain_score:391.2 name:Met_synt_B12; db:Pfam-A.hmm|PF00809.22 evalue:9.1e-58 score:195.0 best_domain_score:193.3 name:Pterin_bind; db:Pfam-A.hmm|PF02574.16 evalue:4e-77 score:258.9 best_domain_score:257.9 name:S-methyl_trans;
sprot_desc Methionine synthase;
sprot_id sp|Q9I2Q2|METH_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I2Q2|METH_PSEAE 6 1243 evalue:0.0e+00 qcov:98.30 identity:62.00;
tigrfam_acc TIGR02082;
tigrfam_desc methionine synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name metH;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR02082 evalue:0 score:1688.6 best_domain_score:1688.3 name:TIGR02082;
23236 21746 CDS
ID metaerg.pl|10638
allec_ids 3.4.21.107; 3.4.21.-;
allgo_ids GO:0005515; GO:0030288; GO:0004252;
allko_ids K04771;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05731.1 3 495 evalue:3.5e-185 qcov:99.40 identity:70.30;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00595; PF12812; PF13180; PF17820; PF10459; PF00089; PF13365;
pfam_desc PDZ domain; PDZ-like domain; PDZ domain; PDZ domain; Peptidase S46; Trypsin; Trypsin-like peptidase domain;
pfam_id PDZ; PDZ_1; PDZ_2; PDZ_6; Peptidase_S46; Trypsin; Trypsin_2;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:1.5e-18 score:66.2 best_domain_score:33.8 name:PDZ; db:Pfam-A.hmm|PF12812.7 evalue:5e-07 score:28.9 best_domain_score:16.2 name:PDZ_1; db:Pfam-A.hmm|PF13180.6 evalue:5.1e-24 score:83.6 best_domain_score:51.4 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:1.2e-15 score:56.3 best_domain_score:31.9 name:PDZ_6; db:Pfam-A.hmm|PF10459.9 evalue:7.2e-06 score:24.2 best_domain_score:11.2 name:Peptidase_S46; db:Pfam-A.hmm|PF00089.26 evalue:4.9e-12 score:45.4 best_domain_score:43.9 name:Trypsin; db:Pfam-A.hmm|PF13365.6 evalue:9.2e-36 score:123.2 best_domain_score:122.1 name:Trypsin_2;
sp YES;
sprot_desc Probable periplasmic serine endoprotease DegP-like;
sprot_id sp|P54925|DEGPL_BARHE;
sprot_target db:uniprot_sprot|sp|P54925|DEGPL_BARHE 47 494 evalue:1.6e-88 qcov:90.30 identity:41.40;
tigrfam_acc TIGR02037;
tigrfam_desc peptidase Do;
tigrfam_mainrole Protein fate;
tigrfam_name degP_htrA_DO;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02037 evalue:9.4e-137 score:455.6 best_domain_score:455.4 name:TIGR02037;
tm_num 1;
21746 21865 signal_peptide
ID metaerg.pl|10639
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
23236 21746 transmembrane_helix
ID metaerg.pl|10640
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i21791-21859o;
23522 24802 CDS
ID metaerg.pl|10641
allgo_ids GO:0016021; GO:0042919; GO:0042925;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Puniceispirillales;f__Puniceispirillaceae;g__UBA8309;s__UBA8309 sp002457765;
genomedb_acc GCA_002457765.1;
genomedb_target db:genomedb|GCA_002457765.1|PDH61894.1 38 418 evalue:3.5e-141 qcov:89.40 identity:73.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF03594; PF16983;
pfam_desc Benzoate membrane transport protein; Molybdate transporter of MFS superfamily;
pfam_id BenE; MFS_MOT1;
pfam_target db:Pfam-A.hmm|PF03594.13 evalue:3.7e-67 score:226.0 best_domain_score:225.7 name:BenE; db:Pfam-A.hmm|PF16983.5 evalue:1.2e-08 score:34.6 best_domain_score:28.1 name:MFS_MOT1;
tm_num 12;
23522 24802 transmembrane_helix
ID metaerg.pl|10642
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i23627-23695o23723-23791i23804-23863o23873-23941i23960-24028o24038-24097i24116-24175o24233-24301i24359-24427o24485-24538i24542-24610o24668-24763i;
26551 24881 CDS
ID metaerg.pl|10643
allgo_ids GO:0016020; GO:0022857; GO:0071705; GO:0016021; GO:0005886; GO:0006865;
allko_ids K03451;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481051.1 1 556 evalue:6.1e-271 qcov:100.00 identity:85.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF02028;
pfam_desc BCCT, betaine/carnitine/choline family transporter;
pfam_id BCCT;
pfam_target db:Pfam-A.hmm|PF02028.17 evalue:3.9e-172 score:572.3 best_domain_score:572.1 name:BCCT;
sprot_desc Glycine betaine/proline/choline transporter VP1723;
sprot_id sp|Q87NZ5|BCCT2_VIBPA;
sprot_target db:uniprot_sprot|sp|Q87NZ5|BCCT2_VIBPA 17 556 evalue:5.1e-184 qcov:97.10 identity:61.30;
tigrfam_acc TIGR00842;
tigrfam_desc transporter, betaine/carnitine/choline transporter (BCCT) family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name bcct;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00842 evalue:5.4e-133 score:443.2 best_domain_score:442.2 name:TIGR00842;
tm_num 12;
26551 24881 transmembrane_helix
ID metaerg.pl|10644
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i25028-25087o25145-25213i25250-25318o25454-25522i25583-25651o25727-25786i25823-25891o25988-26047i26084-26152o26249-26317i26387-26455o26468-26536i;
27019 26606 CDS
ID metaerg.pl|10645
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_074446457.1 1 137 evalue:8.7e-54 qcov:100.00 identity:76.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.4e-12 score:47.6 best_domain_score:47.3 name:Usp;
27336 28178 CDS
ID metaerg.pl|10646
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07499.1 2 280 evalue:1.4e-79 qcov:99.60 identity:54.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF01061;
pfam_desc ABC-2 type transporter;
pfam_id ABC2_membrane;
pfam_target db:Pfam-A.hmm|PF01061.24 evalue:1.8e-18 score:66.0 best_domain_score:66.0 name:ABC2_membrane;
tm_num 6;
27336 28178 transmembrane_helix
ID metaerg.pl|10647
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i27492-27560o27588-27656i27717-27785o27828-27896i27915-27983o28080-28148i;
28397 28963 CDS
ID metaerg.pl|10648
allgo_ids GO:0005737; GO:0006415;
allko_ids K02838;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481086.1 4 188 evalue:1.1e-83 qcov:98.40 identity:85.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF01765;
pfam_desc Ribosome recycling factor;
pfam_id RRF;
pfam_target db:Pfam-A.hmm|PF01765.19 evalue:1.9e-55 score:186.5 best_domain_score:186.2 name:RRF;
sprot_desc Ribosome-recycling factor;
sprot_id sp|A8LK37|RRF_DINSH;
sprot_target db:uniprot_sprot|sp|A8LK37|RRF_DINSH 1 188 evalue:1.2e-81 qcov:100.00 identity:81.40;
tigrfam_acc TIGR00496;
tigrfam_desc ribosome recycling factor;
tigrfam_mainrole Protein synthesis;
tigrfam_name frr;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00496 evalue:5.9e-56 score:188.0 best_domain_score:187.8 name:TIGR00496;
29009 29716 CDS
ID metaerg.pl|10649
allec_ids 2.5.1.-; 2.5.1.31;
allgo_ids GO:0016765; GO:0000287; GO:0004659;
allko_ids K00806;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08064.1 5 233 evalue:2.2e-105 qcov:97.40 identity:79.00;
kegg_pathway_id 00900;
kegg_pathway_name Terpenoid biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id PWY-5817; PWY-6403; PWY-5838; PWY-5064; PWY-4502; PWY-5899; PWY-5134; PWY-6520; PWY-5785; PWY-6383; PWY-5027; PWY-5893; PWY-5133; PWY-5864; PWY-6129; PWY-5132; PWY-5897; PWY-5808; PWY-6263; PWY-5861; PWY-724; PWY-6262; PWY-5805; PWY-5783; POLYISOPRENSYN-PWY; PWY-5701; PWY-5140; PWY-5135; PWY-6404; PWY-5806; PWY-5898; PWY-5816; PWY-5863; PWY-5896; PWY-5862; PWY-5845; PWY-5068; PWY-2681;
metacyc_pathway_name dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; superpathway of menaquinol-13 biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; di-trans,poly-cis-undecaprenyl phosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; lupulone and humulone biosynthesis;; superpathway of menaquinol-11 biosynthesis;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; demethylmenaquinol-8 biosynthesis II;; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; polyisoprenoid biosynthesis (E. coli);; shikonin biosynthesis;; cannabinoid biosynthesis;; xanthohumol biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of menaquinol-12 biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;;
metacyc_pathway_type Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; QUINONE-SYN;; TERPENOPHENOLICS-SYN;; PRENYLFLAVONOID-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF01255;
pfam_desc Putative undecaprenyl diphosphate synthase;
pfam_id Prenyltransf;
pfam_target db:Pfam-A.hmm|PF01255.19 evalue:1.5e-76 score:256.1 best_domain_score:255.9 name:Prenyltransf;
sprot_desc Isoprenyl transferase;
sprot_id sp|Q98MB9|ISPT_RHILO;
sprot_target db:uniprot_sprot|sp|Q98MB9|ISPT_RHILO 5 233 evalue:2.6e-68 qcov:97.40 identity:55.00;
tigrfam_acc TIGR00055;
tigrfam_desc di-trans,poly-cis-decaprenylcistransferase;
tigrfam_mainrole Cell envelope;
tigrfam_name uppS;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00055 evalue:6.2e-84 score:280.1 best_domain_score:279.9 name:TIGR00055;
29713 30513 CDS
ID metaerg.pl|10650
allec_ids 2.7.7.41;
allgo_ids GO:0016021; GO:0005886; GO:0004605; GO:0016024;
allko_ids K00902; K00981;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08065.1 1 262 evalue:1.2e-94 qcov:98.50 identity:69.10;
kegg_pathway_id 00564; 00510;
kegg_pathway_name Glycerophospholipid metabolism; N-Glycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id PWY-5981; PWY4FS-7; PWY0-1319; PWY4FS-8; PHOSLIPSYN-PWY; PHOSLIPSYN2-PWY; PWY-5667;
metacyc_pathway_name CDP-diacylglycerol biosynthesis III;; phosphatidylglycerol biosynthesis I (plastidic);; CDP-diacylglycerol biosynthesis II;; phosphatidylglycerol biosynthesis II (non-plastidic);; superpathway of phospholipid biosynthesis I (bacteria);; superpathway of phospholipid biosynthesis II (plants);; CDP-diacylglycerol biosynthesis I;;
metacyc_pathway_type CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;;
pfam_acc PF01148;
pfam_desc Cytidylyltransferase family;
pfam_id CTP_transf_1;
pfam_target db:Pfam-A.hmm|PF01148.20 evalue:1.4e-48 score:165.2 best_domain_score:164.8 name:CTP_transf_1;
sprot_desc Phosphatidate cytidylyltransferase;
sprot_id sp|Q8G0E0|CDSA_BRUSU;
sprot_target db:uniprot_sprot|sp|Q8G0E0|CDSA_BRUSU 8 245 evalue:4.4e-24 qcov:89.50 identity:34.80;
tm_num 6;
29713 30513 transmembrane_helix
ID metaerg.pl|10651
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i29749-29853o29911-30006i30025-30093o30106-30174i30235-30303o30436-30504i;
30556 31737 CDS
ID metaerg.pl|10652
allec_ids 1.1.1.267;
allgo_ids GO:0005515; GO:0030604; GO:0046872; GO:0070402; GO:0019288; GO:0016114;
allko_ids K00099;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109533240.1 1 389 evalue:1.1e-152 qcov:99.00 identity:75.60;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id PWY-5121; PWY-6270; NONMEVIPP-PWY;
metacyc_pathway_name superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; isoprene biosynthesis I;; methylerythritol phosphate pathway I;;
metacyc_pathway_type DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; ISOPRENOIDS; Super-Pathways;; MEP-Pathways;;
pfam_acc PF13288; PF08436; PF02670;
pfam_desc DXP reductoisomerase C-terminal domain; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain; 1-deoxy-D-xylulose 5-phosphate reductoisomerase;
pfam_id DXPR_C; DXP_redisom_C; DXP_reductoisom;
pfam_target db:Pfam-A.hmm|PF13288.6 evalue:7.6e-35 score:118.9 best_domain_score:118.3 name:DXPR_C; db:Pfam-A.hmm|PF08436.12 evalue:2e-33 score:113.7 best_domain_score:112.7 name:DXP_redisom_C; db:Pfam-A.hmm|PF02670.16 evalue:2.8e-32 score:111.3 best_domain_score:110.1 name:DXP_reductoisom;
sprot_desc 1-deoxy-D-xylulose 5-phosphate reductoisomerase;
sprot_id sp|Q28PJ0|DXR_JANSC;
sprot_target db:uniprot_sprot|sp|Q28PJ0|DXR_JANSC 2 382 evalue:1.2e-142 qcov:96.90 identity:70.20;
tigrfam_acc TIGR00243;
tigrfam_desc 1-deoxy-D-xylulose 5-phosphate reductoisomerase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name Dxr;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00243 evalue:1.6e-114 score:382.0 best_domain_score:381.7 name:TIGR00243;
31749 33104 CDS
ID metaerg.pl|10653
allec_ids 3.4.24.-;
allgo_ids GO:0005515; GO:0016021; GO:0005886; GO:0046872; GO:0004222;
allko_ids K11749;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08067.1 1 451 evalue:3.3e-182 qcov:100.00 identity:70.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00595; PF13180; PF17820; PF02163; PF14685;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Peptidase family M50; Tricorn protease PDZ domain;
pfam_id PDZ; PDZ_2; PDZ_6; Peptidase_M50; Tricorn_PDZ;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:1.5e-09 score:37.3 best_domain_score:18.5 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:5.2e-11 score:42.0 best_domain_score:22.7 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:6e-19 score:66.9 best_domain_score:36.4 name:PDZ_6; db:Pfam-A.hmm|PF02163.22 evalue:1.8e-68 score:229.7 best_domain_score:229.5 name:Peptidase_M50; db:Pfam-A.hmm|PF14685.6 evalue:3.6e-07 score:29.3 best_domain_score:14.2 name:Tricorn_PDZ;
sprot_desc Putative zinc metalloprotease R01501;
sprot_id sp|Q92Q49|Y1501_RHIME;
sprot_target db:uniprot_sprot|sp|Q92Q49|Y1501_RHIME 12 449 evalue:1.2e-61 qcov:97.10 identity:34.60;
tigrfam_acc TIGR00054;
tigrfam_desc RIP metalloprotease RseP;
tigrfam_mainrole Protein fate;
tigrfam_name TIGR00054;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00054 evalue:3.8e-80 score:268.9 best_domain_score:264.4 name:TIGR00054;
tm_num 6;
31749 33104 transmembrane_helix
ID metaerg.pl|10654
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology o31776-31835i31854-31922o32103-32171i32778-32846o32889-32957i33018-33086o;
33358 33654 CDS
ID metaerg.pl|10655
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
tm_num 1;
33358 33654 transmembrane_helix
ID metaerg.pl|10656
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i33559-33627o;
34003 36282 CDS
ID metaerg.pl|10657
allgo_ids GO:0019867; GO:0009279; GO:0016021; GO:0043165; GO:0051205;
allko_ids K07277;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08069.1 6 759 evalue:8.3e-271 qcov:99.30 identity:63.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF01103; PF07244; PF08479;
pfam_desc Surface antigen; Surface antigen variable number repeat; POTRA domain, ShlB-type;
pfam_id Bac_surface_Ag; POTRA; POTRA_2;
pfam_target db:Pfam-A.hmm|PF01103.23 evalue:4.4e-55 score:186.7 best_domain_score:186.3 name:Bac_surface_Ag; db:Pfam-A.hmm|PF07244.15 evalue:2.5e-46 score:155.4 best_domain_score:46.9 name:POTRA; db:Pfam-A.hmm|PF08479.11 evalue:3.3e-11 score:42.1 best_domain_score:10.2 name:POTRA_2;
sprot_desc Outer membrane protein assembly factor BamA;
sprot_id sp|C6V5K2|BAMA_NEORI;
sprot_target db:uniprot_sprot|sp|C6V5K2|BAMA_NEORI 22 759 evalue:8.3e-76 qcov:97.20 identity:26.60;
tigrfam_acc TIGR03303;
tigrfam_desc outer membrane protein assembly complex, YaeT protein;
tigrfam_mainrole Protein fate;
tigrfam_name OM_YaeT;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR03303 evalue:1.4e-180 score:601.4 best_domain_score:601.3 name:TIGR03303;
36282 36857 CDS
ID metaerg.pl|10658
allgo_ids GO:0051082;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068302053.1 7 173 evalue:2.2e-39 qcov:87.40 identity:54.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF03938;
pfam_desc Outer membrane protein (OmpH-like);
pfam_id OmpH;
pfam_target db:Pfam-A.hmm|PF03938.14 evalue:1.1e-15 score:57.5 best_domain_score:57.2 name:OmpH;
sp YES;
36282 36356 signal_peptide
ID metaerg.pl|10659
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
36981 37931 CDS
ID metaerg.pl|10660
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06960.1 4 288 evalue:1.2e-119 qcov:90.20 identity:82.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.2e-31 score:108.9 best_domain_score:68.1 name:EamA;
tm_num 10;
36981 37931 transmembrane_helix
ID metaerg.pl|10661
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i36999-37067o37095-37163i37182-37250o37263-37331i37350-37418o37431-37490i37509-37577o37620-37688i37707-37766o37779-37838i;
39079 37937 CDS
ID metaerg.pl|10662
allec_ids 1.14.15.3;
allgo_ids GO:0006629; GO:0016021; GO:0005886; GO:0018685; GO:0052869; GO:0046872; GO:0043448;
allko_ids K00496;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06879.1 14 376 evalue:6.8e-149 qcov:95.50 identity:69.90;
kegg_pathway_id 00071;
kegg_pathway_name Fatty acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id P221-PWY;
metacyc_pathway_name octane oxidation;;
metacyc_pathway_type Other-Degradation;;
pfam_acc PF00487;
pfam_desc Fatty acid desaturase;
pfam_id FA_desaturase;
pfam_target db:Pfam-A.hmm|PF00487.24 evalue:1.2e-31 score:109.7 best_domain_score:109.7 name:FA_desaturase;
sprot_desc Alkane 1-monooxygenase 2;
sprot_id sp|Q6H941|ALKB2_PSEAE;
sprot_target db:uniprot_sprot|sp|Q6H941|ALKB2_PSEAE 38 355 evalue:9.9e-62 qcov:83.70 identity:43.30;
tm_num 4;
39079 37937 transmembrane_helix
ID metaerg.pl|10663
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology o37991-38059i38153-38221o38249-38317i38618-38686o;
39710 39198 CDS
ID metaerg.pl|10664
allec_ids 4.4.1.5;
allgo_ids GO:0004462; GO:0008270; GO:0019243;
allko_ids K01759;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470425.1 10 168 evalue:2.7e-68 qcov:93.50 identity:78.00;
kegg_pathway_id 00620; 04011;
kegg_pathway_name Pyruvate metabolism; MAPK signaling pathway - yeast;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id METHGLYUT-PWY; PWY-5386;
metacyc_pathway_name superpathway of methylglyoxal degradation;; methylglyoxal degradation I;;
metacyc_pathway_type Aldehyde-Degradation; Super-Pathways;; Methylglyoxal-Detoxification;;
pfam_acc PF00903; PF13669; PF18029;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase-like domain;
pfam_id Glyoxalase; Glyoxalase_4; Glyoxalase_6;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:1.5e-22 score:79.4 best_domain_score:79.2 name:Glyoxalase; db:Pfam-A.hmm|PF13669.6 evalue:1.3e-07 score:31.1 best_domain_score:23.4 name:Glyoxalase_4; db:Pfam-A.hmm|PF18029.1 evalue:2.1e-05 score:24.5 best_domain_score:23.5 name:Glyoxalase_6;
sprot_desc Lactoylglutathione lyase;
sprot_id sp|Q9HU72|LGUL_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HU72|LGUL_PSEAE 7 158 evalue:1.2e-48 qcov:89.40 identity:61.30;
tigrfam_acc TIGR00068;
tigrfam_desc lactoylglutathione lyase;
tigrfam_mainrole Energy metabolism;
tigrfam_name glyox_I;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00068 evalue:8.8e-47 score:157.5 best_domain_score:157.3 name:TIGR00068;
40804 39719 CDS
ID metaerg.pl|10665
allec_ids 3.2.2.31;
allgo_ids GO:0051539; GO:0003677; GO:0019104; GO:0016787; GO:0046872; GO:0006284;
allko_ids K03660; K10801; K10773; K03575;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109531514.1 1 350 evalue:1.1e-132 qcov:97.00 identity:71.70;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF10576; PF00730; PF14815;
pfam_desc Iron-sulfur binding domain of endonuclease III; HhH-GPD superfamily base excision DNA repair protein; NUDIX domain;
pfam_id EndIII_4Fe-2S; HhH-GPD; NUDIX_4;
pfam_target db:Pfam-A.hmm|PF10576.9 evalue:0.00013 score:21.5 best_domain_score:20.3 name:EndIII_4Fe-2S; db:Pfam-A.hmm|PF00730.25 evalue:1.3e-13 score:50.6 best_domain_score:50.0 name:HhH-GPD; db:Pfam-A.hmm|PF14815.6 evalue:2.7e-19 score:68.4 best_domain_score:67.2 name:NUDIX_4;
sprot_desc Adenine DNA glycosylase;
sprot_id sp|P17802|MUTY_ECOLI;
sprot_target db:uniprot_sprot|sp|P17802|MUTY_ECOLI 10 312 evalue:2.2e-47 qcov:83.90 identity:41.90;
40917 41618 CDS
ID metaerg.pl|10666
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068298720.1 28 219 evalue:5.8e-50 qcov:82.40 identity:59.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF05258;
pfam_desc Dna[CI] antecedent, DciA;
pfam_id DciA;
pfam_target db:Pfam-A.hmm|PF05258.12 evalue:2.5e-17 score:62.3 best_domain_score:61.3 name:DciA;
41654 42388 CDS
ID metaerg.pl|10667
allgo_ids GO:0015035;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06882.1 1 237 evalue:6.9e-70 qcov:97.10 identity:60.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF01323; PF13462;
pfam_desc DSBA-like thioredoxin domain; Thioredoxin;
pfam_id DSBA; Thioredoxin_4;
pfam_target db:Pfam-A.hmm|PF01323.20 evalue:2.8e-12 score:46.0 best_domain_score:27.7 name:DSBA; db:Pfam-A.hmm|PF13462.6 evalue:1.2e-41 score:141.8 best_domain_score:141.6 name:Thioredoxin_4;
sp YES;
tm_num 1;
41654 41728 signal_peptide
ID metaerg.pl|10668
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
41654 42388 transmembrane_helix
ID metaerg.pl|10669
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i41672-41740o;
42385 43539 CDS
ID metaerg.pl|10670
allec_ids 2.-.-.-;
allgo_ids GO:0003824; GO:0016740;
allko_ids K01027; K14472;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28296.1 10 376 evalue:7.1e-170 qcov:95.60 identity:80.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id LPSSYN-PWY; LIPA-CORESYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF02515;
pfam_desc CoA-transferase family III;
pfam_id CoA_transf_3;
pfam_target db:Pfam-A.hmm|PF02515.17 evalue:4.1e-127 score:423.5 best_domain_score:423.3 name:CoA_transf_3;
sprot_desc CaiB/baiF CoA-transferase family protein DDB_G0269880;
sprot_id sp|Q55CV9|Y9880_DICDI;
sprot_target db:uniprot_sprot|sp|Q55CV9|Y9880_DICDI 10 342 evalue:6.2e-80 qcov:86.70 identity:44.20;
43677 44588 CDS
ID metaerg.pl|10671
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07338.1 9 303 evalue:1.3e-142 qcov:97.40 identity:88.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00004; PF13401; PF07726; PF07728; PF12774;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain; ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); Hydrolytic ATP binding site of dynein motor region;
pfam_id AAA; AAA_22; AAA_3; AAA_5; AAA_6;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:8.9e-10 score:38.3 best_domain_score:36.5 name:AAA; db:Pfam-A.hmm|PF13401.6 evalue:1.9e-06 score:27.4 best_domain_score:26.3 name:AAA_22; db:Pfam-A.hmm|PF07726.11 evalue:8.4e-08 score:31.4 best_domain_score:17.1 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:6.7e-11 score:41.6 best_domain_score:40.0 name:AAA_5; db:Pfam-A.hmm|PF12774.7 evalue:2.6e-06 score:25.8 best_domain_score:25.2 name:AAA_6;
44692 46002 CDS
ID metaerg.pl|10672
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07339.1 1 419 evalue:1.5e-184 qcov:96.10 identity:77.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF05762;
pfam_desc VWA domain containing CoxE-like protein;
pfam_id VWA_CoxE;
pfam_target db:Pfam-A.hmm|PF05762.14 evalue:2.7e-70 score:235.5 best_domain_score:234.9 name:VWA_CoxE;
46139 47116 CDS
ID metaerg.pl|10673
allgo_ids GO:0043546;
allko_ids K07402;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07340.1 1 325 evalue:8.8e-129 qcov:100.00 identity:73.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF13478; PF02625;
pfam_desc XdhC Rossmann domain; XdhC and CoxI family;
pfam_id XdhC_C; XdhC_CoxI;
pfam_target db:Pfam-A.hmm|PF13478.6 evalue:1.1e-40 score:138.2 best_domain_score:137.4 name:XdhC_C; db:Pfam-A.hmm|PF02625.16 evalue:2.1e-25 score:87.9 best_domain_score:87.9 name:XdhC_CoxI;
sprot_desc Molybdenum cofactor insertion chaperone PaoD;
sprot_id sp|P77183|PAOD_ECOLI;
sprot_target db:uniprot_sprot|sp|P77183|PAOD_ECOLI 2 318 evalue:1.1e-24 qcov:97.50 identity:32.20;
47116 48210 CDS
ID metaerg.pl|10674
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07341.1 1 360 evalue:2.6e-105 qcov:98.90 identity:61.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
48409 48903 CDS
ID metaerg.pl|10675
allec_ids 1.2.5.3;
allgo_ids GO:0009055; GO:0051536; GO:0051537; GO:0046872;
allko_ids K13483; K00106; K00087; K03518; K13482; K13480; K13481;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__XJSP;s__XJSP sp002794355;
genomedb_acc GCF_002794355.1;
genomedb_target db:genomedb|GCF_002794355.1|WP_100195402.1 1 160 evalue:2.6e-73 qcov:97.60 identity:83.80;
kegg_pathway_id 00633; 00983; 00680; 00230;
kegg_pathway_name Trinitrotoluene degradation; Drug metabolism - other enzymes; Methane metabolism; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00111; PF01799;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain;
pfam_id Fer2; Fer2_2;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:1e-08 score:34.3 best_domain_score:34.3 name:Fer2; db:Pfam-A.hmm|PF01799.20 evalue:3.3e-32 score:109.6 best_domain_score:109.0 name:Fer2_2;
sprot_desc Carbon monoxide dehydrogenase small chain;
sprot_id sp|P19921|DCMS_OLICO;
sprot_target db:uniprot_sprot|sp|P19921|DCMS_OLICO 4 164 evalue:5.1e-47 qcov:98.20 identity:55.90;
48911 49312 CDS
ID metaerg.pl|10676
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
sp YES;
48911 48973 signal_peptide
ID metaerg.pl|10677
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
49409 51781 CDS
ID metaerg.pl|10678
allec_ids 1.2.5.3;
allgo_ids GO:0016491; GO:0055114; GO:0018492; GO:0005507; GO:0030151;
allko_ids K03519; K11178; K03520; K00157; K00087; K00106; K13481; K11177; K13482; K03518;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07347.1 1 788 evalue:0.0e+00 qcov:99.70 identity:88.60;
kegg_pathway_id 00280; 00983; 00230; 00380; 00760; 00750; 00633; 00680; 00350;
kegg_pathway_name Valine, leucine and isoleucine degradation; Drug metabolism - other enzymes; Purine metabolism; Tryptophan metabolism; Nicotinate and nicotinamide metabolism; Vitamin B6 metabolism; Trinitrotoluene degradation; Methane metabolism; Tyrosine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metabolic_acc TIGR02416;
metabolic_process compound:Carbon monoxide;process:CO oxidation;gene:coxL;;
pfam_acc PF01315; PF02738;
pfam_desc Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; Molybdopterin-binding domain of aldehyde dehydrogenase;
pfam_id Ald_Xan_dh_C; Ald_Xan_dh_C2;
pfam_target db:Pfam-A.hmm|PF01315.22 evalue:5.4e-26 score:90.4 best_domain_score:89.2 name:Ald_Xan_dh_C; db:Pfam-A.hmm|PF02738.18 evalue:2.3e-180 score:599.9 best_domain_score:599.7 name:Ald_Xan_dh_C2;
sprot_desc Carbon monoxide dehydrogenase large chain;
sprot_id sp|P19913|DCML_HYDPS;
sprot_target db:uniprot_sprot|sp|P19913|DCML_HYDPS 6 790 evalue:4.9e-140 qcov:99.40 identity:37.10;
51797 52585 CDS
ID metaerg.pl|10679
allec_ids 1.2.5.3;
allgo_ids GO:0016491; GO:0055114; GO:0071949;
allko_ids K13481; K03518; K11177; K13482; K11178; K03519; K13479; K00087; K00106;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ07348.1 1 261 evalue:8.7e-111 qcov:99.60 identity:80.80;
kegg_pathway_id 00230; 00680; 00983; 00633;
kegg_pathway_name Purine metabolism; Methane metabolism; Drug metabolism - other enzymes; Trinitrotoluene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00941;
pfam_desc FAD binding domain in molybdopterin dehydrogenase;
pfam_id FAD_binding_5;
pfam_target db:Pfam-A.hmm|PF00941.21 evalue:2.6e-42 score:143.7 best_domain_score:143.3 name:FAD_binding_5;
sprot_desc Carbon monoxide dehydrogenase medium chain;
sprot_id sp|P19920|DCMM_OLICO;
sprot_target db:uniprot_sprot|sp|P19920|DCMM_OLICO 3 261 evalue:2.9e-28 qcov:98.90 identity:35.60;
53654 52740 CDS
ID metaerg.pl|10680
allec_ids 3.4.24.-;
allgo_ids GO:0004252; GO:0006508; GO:0030288; GO:0046872; GO:0008237;
allko_ids K07261;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06286.1 17 301 evalue:2.5e-138 qcov:93.80 identity:82.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF03411;
pfam_desc Penicillin-insensitive murein endopeptidase;
pfam_id Peptidase_M74;
pfam_target db:Pfam-A.hmm|PF03411.13 evalue:4.2e-95 score:317.1 best_domain_score:316.8 name:Peptidase_M74;
sp YES;
sprot_desc Penicillin-insensitive murein endopeptidase;
sprot_id sp|P44566|MEPA_HAEIN;
sprot_target db:uniprot_sprot|sp|P44566|MEPA_HAEIN 52 288 evalue:1.4e-47 qcov:78.00 identity:42.20;
tm_num 1;
52740 52829 signal_peptide
ID metaerg.pl|10681
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
53654 52740 transmembrane_helix
ID metaerg.pl|10682
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i52758-52826o;
55015 53627 CDS
ID metaerg.pl|10683
allgo_ids GO:0016021; GO:0055085;
allko_ids K08219; K08217; K06902;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468182.1 13 452 evalue:4.5e-187 qcov:95.20 identity:73.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF11700; PF07690; PF13347;
pfam_desc Vacuole effluxer Atg22 like; Major Facilitator Superfamily; MFS/sugar transport protein;
pfam_id ATG22; MFS_1; MFS_2;
pfam_target db:Pfam-A.hmm|PF11700.8 evalue:3e-31 score:107.8 best_domain_score:99.3 name:ATG22; db:Pfam-A.hmm|PF07690.16 evalue:6.4e-20 score:70.6 best_domain_score:55.2 name:MFS_1; db:Pfam-A.hmm|PF13347.6 evalue:1.3e-14 score:52.8 best_domain_score:52.3 name:MFS_2;
tm_num 12;
55015 53627 transmembrane_helix
ID metaerg.pl|10684
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i53681-53749o53792-53860i53879-53947o53960-54028i54083-54151o54233-54292i54389-54457o54485-54553i54572-54640o54683-54751i54812-54880o54908-54961i;
55781 55122 CDS
ID metaerg.pl|10685
allec_ids 3.4.-.-;
allgo_ids GO:0005657; GO:0004519; GO:0008233; GO:0003697; GO:0006974;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05198.1 1 219 evalue:5.2e-101 qcov:100.00 identity:77.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF02586;
pfam_desc SOS response associated peptidase (SRAP);
pfam_id SRAP;
pfam_target db:Pfam-A.hmm|PF02586.14 evalue:2.4e-59 score:199.8 best_domain_score:199.6 name:SRAP;
sprot_desc Abasic site processing protein HMCES;
sprot_id sp|Q5XIJ1|HMCES_RAT;
sprot_target db:uniprot_sprot|sp|Q5XIJ1|HMCES_RAT 1 218 evalue:1.2e-19 qcov:99.50 identity:29.30;
56940 55879 CDS
ID metaerg.pl|10686
allgo_ids GO:0030001; GO:0046872; GO:0042597; GO:0006829;
allko_ids K09815;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796990.1 12 350 evalue:3.5e-91 qcov:96.00 identity:53.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF01297;
pfam_desc Zinc-uptake complex component A periplasmic;
pfam_id ZnuA;
pfam_target db:Pfam-A.hmm|PF01297.17 evalue:5.8e-55 score:185.7 best_domain_score:185.5 name:ZnuA;
sp YES;
sprot_desc High-affinity zinc uptake system protein ZnuA;
sprot_id sp|P44526|ZNUA_HAEIN;
sprot_target db:uniprot_sprot|sp|P44526|ZNUA_HAEIN 14 350 evalue:1.3e-18 qcov:95.50 identity:35.90;
55879 55956 signal_peptide
ID metaerg.pl|10687
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
57030 57536 CDS
ID metaerg.pl|10688
allgo_ids GO:0003700; GO:0006355; GO:0032993; GO:0001217; GO:0042802; GO:0000976; GO:0006351;
allko_ids K09823;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05196.1 9 162 evalue:5.0e-59 qcov:91.70 identity:74.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF01475;
pfam_desc Ferric uptake regulator family;
pfam_id FUR;
pfam_target db:Pfam-A.hmm|PF01475.19 evalue:2.5e-09 score:36.6 best_domain_score:35.6 name:FUR;
sprot_desc Zinc uptake regulation protein;
sprot_id sp|P0AC51|ZUR_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AC51|ZUR_ECOLI 23 158 evalue:9.2e-20 qcov:81.00 identity:38.10;
57533 58405 CDS
ID metaerg.pl|10689
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015633;
allko_ids K02071; K06861; K01996; K02045; K02052; K02006; K09817; K05847; K02049; K01995;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05195.1 9 274 evalue:4.8e-94 qcov:91.70 identity:71.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6135; PWY-6171; PWY-6166; PWY-6188;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.1e-08 score:34.5 best_domain_score:22.9 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.8e-25 score:89.3 best_domain_score:88.6 name:ABC_tran;
sprot_desc Zinc import ATP-binding protein ZnuC;
sprot_id sp|A1B9K8|ZNUC_PARDP;
sprot_target db:uniprot_sprot|sp|A1B9K8|ZNUC_PARDP 15 231 evalue:4.6e-75 qcov:74.80 identity:65.40;
58402 59217 CDS
ID metaerg.pl|10690
allgo_ids GO:0005887; GO:0042626; GO:0043190; GO:0055085; GO:0005886; GO:0010043; GO:0006829;
allko_ids K09816;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ05194.1 1 271 evalue:2.0e-102 qcov:100.00 identity:80.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00950;
pfam_desc ABC 3 transport family;
pfam_id ABC-3;
pfam_target db:Pfam-A.hmm|PF00950.17 evalue:8e-66 score:221.4 best_domain_score:221.2 name:ABC-3;
sprot_desc High-affinity zinc uptake system membrane protein ZnuB;
sprot_id sp|P44691|ZNUB_HAEIN;
sprot_target db:uniprot_sprot|sp|P44691|ZNUB_HAEIN 5 256 evalue:2.1e-42 qcov:93.00 identity:42.20;
tm_num 7;
58402 59217 transmembrane_helix
ID metaerg.pl|10691
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology o58429-58491i58528-58596o58639-58707i58765-58833o58912-58980i59041-59109o59119-59187i;
60067 59309 CDS
ID metaerg.pl|10692
allec_ids 2.7.1.23;
allgo_ids GO:0003951; GO:0006741; GO:0005737; GO:0005524; GO:0046872; GO:0019674;
allko_ids K00858;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE46714.1 4 251 evalue:2.4e-102 qcov:98.40 identity:78.60;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id NADPHOS-DEPHOS-PWY; PWY-5083;
metacyc_pathway_name NAD phosphorylation and dephosphorylation;; NAD/NADH phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; NAD-Metabolism;;
pfam_acc PF01513;
pfam_desc ATP-NAD kinase;
pfam_id NAD_kinase;
pfam_target db:Pfam-A.hmm|PF01513.21 evalue:5.5e-19 score:67.7 best_domain_score:67.2 name:NAD_kinase;
sprot_desc NAD kinase;
sprot_id sp|A3PML8|NADK_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PML8|NADK_RHOS1 4 252 evalue:3.4e-95 qcov:98.80 identity:71.10;
60221 61729 CDS
ID metaerg.pl|10693
allec_ids 6.3.5.4;
allgo_ids GO:0004066; GO:0006529; GO:0005829; GO:0005524; GO:0006541; GO:0070981;
allko_ids K01953;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCO07;s__HLUCCO07 sp001314705;
genomedb_acc GCA_001314705.1;
genomedb_target db:genomedb|GCA_001314705.1|KPP83361.1 1 501 evalue:1.0e-224 qcov:99.80 identity:79.00;
kegg_pathway_id 00910; 00252;
kegg_pathway_name Nitrogen metabolism; Alanine and aspartate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id ASPARAGINE-BIOSYNTHESIS; PWY0-1325;
metacyc_pathway_name L-asparagine biosynthesis I;; superpathway of L-asparagine biosynthesis;;
metacyc_pathway_type ASPARAGINE-SYN;; ASPARAGINE-SYN; Super-Pathways;;
pfam_acc PF00733; PF13522; PF13537;
pfam_desc Asparagine synthase; Glutamine amidotransferase domain; Glutamine amidotransferase domain;
pfam_id Asn_synthase; GATase_6; GATase_7;
pfam_target db:Pfam-A.hmm|PF00733.21 evalue:1.3e-73 score:247.9 best_domain_score:159.2 name:Asn_synthase; db:Pfam-A.hmm|PF13522.6 evalue:1.8e-27 score:95.4 best_domain_score:93.7 name:GATase_6; db:Pfam-A.hmm|PF13537.6 evalue:2.5e-32 score:110.6 best_domain_score:110.0 name:GATase_7;
sprot_desc Asparagine synthetase [glutamine-hydrolyzing] 2;
sprot_id sp|Q43011|ASNS2_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q43011|ASNS2_ORYSJ 1 445 evalue:9.0e-71 qcov:88.60 identity:37.60;
tigrfam_acc TIGR01536;
tigrfam_desc asparagine synthase (glutamine-hydrolyzing);
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name asn_synth_AEB;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01536 evalue:1.5e-111 score:373.1 best_domain_score:306.8 name:TIGR01536;
61942 63258 CDS
ID metaerg.pl|10694
allec_ids 2.1.2.1;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0004372; GO:0019264; GO:0035999;
allko_ids K00600;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105319259.1 14 438 evalue:7.2e-211 qcov:97.00 identity:85.40;
kegg_pathway_id 00260; 00680; 00670; 00460;
kegg_pathway_name Glycine, serine and threonine metabolism; Methane metabolism; One carbon pool by folate; Cyanoamino acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id PWY-3841; PWY-181; PWY-1622; PWY-3661; SER-GLYSYN-PWY; PWY-2201; PWY-5497; GLYSYN-PWY; 1CMET2-PWY; PWY-2161;
metacyc_pathway_name folate transformations II;; photorespiration;; formaldehyde assimilation I (serine pathway);; glycine betaine degradation I;; superpathway of L-serine and glycine biosynthesis I;; folate transformations I;; purine nucleobases degradation II (anaerobic);; glycine biosynthesis I;; N10-formyl-tetrahydrofolate biosynthesis;; folate polyglutamylation;;
metacyc_pathway_type Folate-Transformations;; Photosynthesis;; Formaldehyde-Assimilation;; Glycine-Betaine-Degradation;; Amino-Acid-Biosynthesis; Super-Pathways;; Folate-Transformations;; Fermentation; Purine-Degradation;; GLYCINE-SYN;; Folate-Biosynthesis;; Folate-Biosynthesis;;
pfam_acc PF00155; PF01041; PF00464;
pfam_desc Aminotransferase class I and II; DegT/DnrJ/EryC1/StrS aminotransferase family; Serine hydroxymethyltransferase;
pfam_id Aminotran_1_2; DegT_DnrJ_EryC1; SHMT;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:3.1e-08 score:32.4 best_domain_score:31.9 name:Aminotran_1_2; db:Pfam-A.hmm|PF01041.17 evalue:6.9e-05 score:21.5 best_domain_score:21.0 name:DegT_DnrJ_EryC1; db:Pfam-A.hmm|PF00464.19 evalue:1.1e-175 score:583.2 best_domain_score:583.0 name:SHMT;
sprot_desc Serine hydroxymethyltransferase;
sprot_id sp|Q3IZN2|GLYA_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IZN2|GLYA_RHOS4 14 438 evalue:1.5e-191 qcov:97.00 identity:77.90;
63275 64051 CDS
ID metaerg.pl|10695
allec_ids 3.-.-.-;
allgo_ids GO:0016788; GO:0005739; GO:0016787;
allko_ids K13703;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Defluviimonas_B;s__Defluviimonas_B sp002423245;
genomedb_acc GCA_002423245.1;
genomedb_target db:genomedb|GCA_002423245.1|DIVD01000025.1_12 3 255 evalue:1.6e-93 qcov:98.10 identity:68.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00561; PF12697; PF12146; PF07819; PF00975;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33; PGAP1-like protein; Thioesterase domain;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4; PGAP1; Thioesterase;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:5.1e-16 score:58.3 best_domain_score:53.7 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:1.6e-18 score:67.4 best_domain_score:67.2 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:5e-10 score:38.3 best_domain_score:37.8 name:Hydrolase_4; db:Pfam-A.hmm|PF07819.13 evalue:8.6e-06 score:24.9 best_domain_score:13.7 name:PGAP1; db:Pfam-A.hmm|PF00975.20 evalue:7.3e-08 score:32.0 best_domain_score:31.7 name:Thioesterase;
sprot_desc hypothetical protein;
sprot_id sp|Q8K4F5|ABHDB_MOUSE;
sprot_target db:uniprot_sprot|sp|Q8K4F5|ABHDB_MOUSE 15 255 evalue:6.3e-44 qcov:93.40 identity:42.00;
64243 64061 CDS
ID metaerg.pl|10696
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE46718.1 1 60 evalue:3.2e-08 qcov:100.00 identity:58.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
tm_num 2;
64243 64061 transmembrane_helix
ID metaerg.pl|10697
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i64073-64141o64154-64222i;
64389 64464 tRNA
ID metaerg.pl|10698
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
name tRNA_Val_tac;
65391 64561 CDS
ID metaerg.pl|10699
allec_ids 1.-.-.-;
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06073.1 1 276 evalue:3.1e-106 qcov:100.00 identity:74.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-5479; PWY-5987; PWY-5469; PWY-5826; PWY-2821; PWY-5271; PWY-4302;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; sesamin biosynthesis;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00106; PF13561;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase;
pfam_id adh_short; adh_short_C2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:8.9e-34 score:115.9 best_domain_score:114.3 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:1.7e-46 score:157.9 best_domain_score:154.5 name:adh_short_C2;
sprot_desc Uncharacterized oxidoreductase TM_0325;
sprot_id sp|Q9WYG0|Y325_THEMA;
sprot_target db:uniprot_sprot|sp|Q9WYG0|Y325_THEMA 6 264 evalue:3.1e-20 qcov:93.80 identity:30.40;
66491 65388 CDS
ID metaerg.pl|10700
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE49617.1 9 365 evalue:5.5e-103 qcov:97.30 identity:59.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF08241; PF13649; PF05175;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain;
pfam_id Methyltransf_11; Methyltransf_25; MTS;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:6.8e-05 score:22.7 best_domain_score:21.6 name:Methyltransf_11; db:Pfam-A.hmm|PF13649.6 evalue:1.5e-07 score:31.2 best_domain_score:29.7 name:Methyltransf_25; db:Pfam-A.hmm|PF05175.14 evalue:1.6e-42 score:144.2 best_domain_score:143.8 name:MTS;
66885 66526 CDS
ID metaerg.pl|10701
allgo_ids GO:0030163; GO:0006508;
allko_ids K06891;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__PHEC01;s__PHEC01 sp002841115;
genomedb_acc GCA_002841115.1;
genomedb_target db:genomedb|GCA_002841115.1|PKP72726.1 9 119 evalue:1.8e-47 qcov:93.30 identity:83.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF02617;
pfam_desc ATP-dependent Clp protease adaptor protein ClpS;
pfam_id ClpS;
pfam_target db:Pfam-A.hmm|PF02617.17 evalue:2.6e-35 score:119.3 best_domain_score:119.0 name:ClpS;
sprot_desc ATP-dependent Clp protease adapter protein ClpS;
sprot_id sp|A4WPY6|CLPS_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WPY6|CLPS_RHOS5 3 119 evalue:3.7e-47 qcov:98.30 identity:77.80;
66999 67697 CDS
ID metaerg.pl|10702
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06076.1 1 231 evalue:2.1e-92 qcov:99.60 identity:75.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
67993 69957 CDS
ID metaerg.pl|10703
allgo_ids GO:0006508; GO:0009002;
allko_ids K01286; K07258;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06077.1 2 654 evalue:1.4e-157 qcov:99.80 identity:54.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF13354; PF00768;
pfam_desc Beta-lactamase enzyme family; D-alanyl-D-alanine carboxypeptidase;
pfam_id Beta-lactamase2; Peptidase_S11;
pfam_target db:Pfam-A.hmm|PF13354.6 evalue:1.1e-11 score:43.9 best_domain_score:43.2 name:Beta-lactamase2; db:Pfam-A.hmm|PF00768.20 evalue:2.4e-59 score:199.9 best_domain_score:199.5 name:Peptidase_S11;
sp YES;
67993 68037 signal_peptide
ID metaerg.pl|10704
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
70009 70959 CDS
ID metaerg.pl|10705
allec_ids 2.5.1.61;
allgo_ids GO:0004418; GO:0033014; GO:0018160; GO:0006782;
allko_ids K01749;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE49373.1 1 315 evalue:4.8e-132 qcov:99.70 identity:78.10;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id PWY-5529; PWY-5189; PWY-5188; PWY-5918; PWY-5920;
metacyc_pathway_name superpathway of bacteriochlorophyll a biosynthesis;; tetrapyrrole biosynthesis II (from glycine);; tetrapyrrole biosynthesis I (from glutamate);; superpathay of heme b biosynthesis from glutamate;; superpathway of b heme biosynthesis from glycine;;
metacyc_pathway_type Chlorophyll-a-Biosynthesis; Super-Pathways;; Tetrapyrrole-Biosynthesis;; Tetrapyrrole-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF01379; PF03900;
pfam_desc Porphobilinogen deaminase, dipyromethane cofactor binding domain; Porphobilinogen deaminase, C-terminal domain;
pfam_id Porphobil_deam; Porphobil_deamC;
pfam_target db:Pfam-A.hmm|PF01379.20 evalue:1e-74 score:249.7 best_domain_score:249.4 name:Porphobil_deam; db:Pfam-A.hmm|PF03900.15 evalue:3.9e-15 score:55.2 best_domain_score:54.2 name:Porphobil_deamC;
sprot_desc Porphobilinogen deaminase;
sprot_id sp|A1B853|HEM3_PARDP;
sprot_target db:uniprot_sprot|sp|A1B853|HEM3_PARDP 6 313 evalue:4.7e-118 qcov:97.50 identity:71.40;
tigrfam_acc TIGR00212;
tigrfam_desc hydroxymethylbilane synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemC;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00212 evalue:4.8e-99 score:330.2 best_domain_score:330.1 name:TIGR00212;
72127 71045 CDS
ID metaerg.pl|10706
allec_ids 2.9.1.-;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE49374.1 3 346 evalue:1.4e-111 qcov:95.60 identity:61.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00581;
pfam_desc Rhodanese-like domain;
pfam_id Rhodanese;
pfam_target db:Pfam-A.hmm|PF00581.20 evalue:1.5e-11 score:44.0 best_domain_score:42.5 name:Rhodanese;
tigrfam_acc TIGR03167;
tigrfam_desc tRNA 2-selenouridine synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name tRNA_sel_U_synt;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03167 evalue:3.9e-98 score:327.8 best_domain_score:327.6 name:TIGR03167;
72807 72124 CDS
ID metaerg.pl|10707
allec_ids 3.1.1.1;
allgo_ids GO:0016788; GO:0005576; GO:0004064; GO:0052689; GO:0004622; GO:0080030;
allko_ids K10804;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus sediminis;
genomedb_acc GCF_900188295.1;
genomedb_target db:genomedb|GCF_900188295.1|WP_089386903.1 2 222 evalue:8.1e-73 qcov:97.40 identity:68.80;
kegg_pathway_id 01040;
kegg_pathway_name Biosynthesis of unsaturated fatty acids;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
metacyc_pathway_id PWY-6303;
metacyc_pathway_name methyl indole-3-acetate interconversion;;
metacyc_pathway_type Auxin-Biosynthesis; Interconversion;;
pfam_acc PF00657; PF13472;
pfam_desc GDSL-like Lipase/Acylhydrolase; GDSL-like Lipase/Acylhydrolase family;
pfam_id Lipase_GDSL; Lipase_GDSL_2;
pfam_target db:Pfam-A.hmm|PF00657.22 evalue:2.1e-09 score:36.9 best_domain_score:36.4 name:Lipase_GDSL; db:Pfam-A.hmm|PF13472.6 evalue:2.8e-24 score:85.7 best_domain_score:85.5 name:Lipase_GDSL_2;
sp YES;
sprot_desc Esterase TesA;
sprot_id sp|Q9HZY8|EST_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HZY8|EST_PSEAE 16 214 evalue:1.1e-23 qcov:87.70 identity:34.20;
72124 72201 signal_peptide
ID metaerg.pl|10708
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
72851 73549 CDS
ID metaerg.pl|10709
allgo_ids GO:0005524; GO:0016887;
allko_ids K01995; K02065; K02049; K02031; K10112; K10111; K01998; K05816; K10235; K11076; K10243; K09812; K02018; K02023; K02000; K02003; K01997; K05847; K02010; K02006; K02052; K11084; K02017; K02032; K01996; K06861; K02071; K11072; K02068; K02045;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092886537.1 1 230 evalue:1.2e-103 qcov:99.10 identity:85.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:6.1e-30 score:103.8 best_domain_score:103.4 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YbbA;
sprot_id sp|P0A9T9|YBBA_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9T9|YBBA_ECO57 3 225 evalue:2.7e-54 qcov:96.10 identity:51.60;
73546 76077 CDS
ID metaerg.pl|10710
allgo_ids GO:0016020;
allko_ids K02004; K09808;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06081.1 3 843 evalue:0.0e+00 qcov:99.80 identity:71.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF02687;
pfam_desc FtsX-like permease family;
pfam_id FtsX;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:1.1e-09 score:37.9 best_domain_score:26.9 name:FtsX;
sp YES;
tm_num 10;
73546 73674 signal_peptide
ID metaerg.pl|10711
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
73546 76077 transmembrane_helix
ID metaerg.pl|10712
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i73600-73668o74323-74391i74488-74556o74614-74682i74758-74817o74827-74895i74989-75048o75685-75753i75865-75933o75961-76029i;
77106 76162 CDS
ID metaerg.pl|10713
allgo_ids GO:0030001; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479676.1 14 314 evalue:5.6e-48 qcov:95.90 identity:44.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF01297;
pfam_desc Zinc-uptake complex component A periplasmic;
pfam_id ZnuA;
pfam_target db:Pfam-A.hmm|PF01297.17 evalue:3.2e-44 score:150.5 best_domain_score:150.3 name:ZnuA;
sp YES;
tm_num 1;
76162 76242 signal_peptide
ID metaerg.pl|10714
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
77106 76162 transmembrane_helix
ID metaerg.pl|10715
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
topology i76174-76242o;
78252 77188 CDS
ID metaerg.pl|10716
allec_ids 2.7.7.7;
allgo_ids GO:0006281; GO:0005737; GO:0003684; GO:0003887; GO:0000287; GO:0006261;
allko_ids K03515; K02346;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092891550.1 2 354 evalue:5.6e-137 qcov:99.70 identity:73.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF00817; PF11799;
pfam_desc impB/mucB/samB family; impB/mucB/samB family C-terminal domain;
pfam_id IMS; IMS_C;
pfam_target db:Pfam-A.hmm|PF00817.20 evalue:2.4e-50 score:169.7 best_domain_score:169.2 name:IMS; db:Pfam-A.hmm|PF11799.8 evalue:7.9e-21 score:74.2 best_domain_score:72.8 name:IMS_C;
sprot_desc DNA polymerase IV 2;
sprot_id sp|Q8UJK7|DPO42_AGRFC;
sprot_target db:uniprot_sprot|sp|Q8UJK7|DPO42_AGRFC 1 353 evalue:7.9e-122 qcov:99.70 identity:64.90;
79934 78342 CDS
ID metaerg.pl|10717
allko_ids K01514;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06561.1 1 525 evalue:2.3e-227 qcov:99.10 identity:73.30;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF02541;
pfam_desc Ppx/GppA phosphatase family;
pfam_id Ppx-GppA;
pfam_target db:Pfam-A.hmm|PF02541.16 evalue:1.7e-38 score:131.9 best_domain_score:131.5 name:Ppx-GppA;
82305 80110 CDS
ID metaerg.pl|10718
allec_ids 2.7.4.1;
allgo_ids GO:0009358; GO:0005524; GO:0046872; GO:0008976; GO:0006799;
allko_ids K00937;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06560.1 1 731 evalue:0.0e+00 qcov:100.00 identity:81.70;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
pfam_acc PF13091; PF02503; PF13090; PF17941; PF13089;
pfam_desc PLD-like domain; Polyphosphate kinase middle domain; Polyphosphate kinase C-terminal domain 2; Polyphosphate kinase C-terminal domain 1; Polyphosphate kinase N-terminal domain;
pfam_id PLDc_2; PP_kinase; PP_kinase_C; PP_kinase_C_1; PP_kinase_N;
pfam_target db:Pfam-A.hmm|PF13091.6 evalue:7.2e-07 score:28.4 best_domain_score:18.5 name:PLDc_2; db:Pfam-A.hmm|PF02503.17 evalue:4e-59 score:198.9 best_domain_score:198.3 name:PP_kinase; db:Pfam-A.hmm|PF13090.6 evalue:3.4e-58 score:195.2 best_domain_score:192.5 name:PP_kinase_C; db:Pfam-A.hmm|PF17941.1 evalue:3.3e-73 score:244.0 best_domain_score:243.1 name:PP_kinase_C_1; db:Pfam-A.hmm|PF13089.6 evalue:4.1e-35 score:119.6 best_domain_score:117.5 name:PP_kinase_N;
sprot_desc Polyphosphate kinase;
sprot_id sp|Q2IX63|PPK1_RHOP2;
sprot_target db:uniprot_sprot|sp|Q2IX63|PPK1_RHOP2 28 718 evalue:1.9e-234 qcov:94.50 identity:60.60;
tigrfam_acc TIGR03705;
tigrfam_desc polyphosphate kinase 1;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name poly_P_kin;
tigrfam_sub1role Phosphorus compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR03705 evalue:1.6e-270 score:898.4 best_domain_score:898.3 name:TIGR03705;
82625 82413 CDS
ID metaerg.pl|10719
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH29773.1 2 64 evalue:3.1e-15 qcov:90.00 identity:77.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.92596; 28.6013; 0.881809; 23.7616; 0.0319604;
>Feature NODE_79_length_81847_cov_8.211
1013 3 CDS
ID metaerg.pl|10720
allgo_ids GO:0000155; GO:0007165;
allko_ids K07652; K07639; K07641; K07646; K03407; K00936; K07654; K07651; K07768; K11633; K11640; K02484; K07642; K07643; K07645; K07656; K01768; K07640; K07636; K07638; K07653; K07644; K10681; K07650; K11629; K07769; K02486;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133811.1 1 337 evalue:2.8e-146 qcov:100.00 identity:81.60;
kegg_pathway_id 02020; 00230;
kegg_pathway_name Two-component system - General; Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00512;
pfam_desc His Kinase A (phospho-acceptor) domain;
pfam_id HisKA;
pfam_target db:Pfam-A.hmm|PF00512.25 evalue:3e-08 score:32.8 best_domain_score:31.1 name:HisKA;
tm_num 2;
1013 3 transmembrane_helix
ID metaerg.pl|10721
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i21-89o423-482i;
1694 1020 CDS
ID metaerg.pl|10722
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0009405; GO:0006355;
allko_ids K07638; K07653; K07636; K02482; K02480; K07678; K10715; K11527; K02030; K08479; K10916; K02668; K03388; K07710; K07640; K01768; K02489; K07716; K04757; K11357; K10125; K11383; K13761; K02486; K12767; K07769; K07717; K07675; K07647; K07676; K10681; K06379; K01769; K07644; K07709; K08884; K07711; K11354; K07778; K02575; K07768; K07651; K07718; K02478; K07679; K07648; K03407; K07637; K07654; K07777; K07682; K07652; K07646; K07641; K01120; K07673; K08475; K07639; K07704; K10909; K08282; K01937; K07645; K07708; K07677; K02491; K11231; K07642; K11711; K11356; K11640; K00760; K02484; K07771;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133812.1 1 224 evalue:4.2e-98 qcov:100.00 identity:80.40;
kegg_pathway_id 00240; 00230; 05111; 00983; 00790; 03090; 02020; 04011;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Drug metabolism - other enzymes; Folate biosynthesis; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:3.6e-28 score:97.2 best_domain_score:96.7 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:1.8e-23 score:81.6 best_domain_score:80.7 name:Trans_reg_C;
sprot_desc Transcriptional regulatory protein PmrA;
sprot_id sp|Q70FH0|PMRA_PECPM;
sprot_target db:uniprot_sprot|sp|Q70FH0|PMRA_PECPM 1 220 evalue:4.8e-40 qcov:98.20 identity:41.40;
2530 1691 CDS
ID metaerg.pl|10723
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133813.1 1 279 evalue:3.0e-141 qcov:100.00 identity:88.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
sp YES;
1691 1753 signal_peptide
ID metaerg.pl|10724
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
3069 2581 CDS
ID metaerg.pl|10725
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133814.1 1 162 evalue:3.7e-51 qcov:100.00 identity:76.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
sp YES;
2581 2634 signal_peptide
ID metaerg.pl|10726
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
5419 3257 CDS
ID metaerg.pl|10727
allgo_ids GO:0006812; GO:0015299; GO:0016021; GO:0055085; GO:0006814;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133815.1 1 720 evalue:0.0e+00 qcov:100.00 identity:88.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00999;
pfam_desc Sodium/hydrogen exchanger family;
pfam_id Na_H_Exchanger;
pfam_target db:Pfam-A.hmm|PF00999.21 evalue:2e-55 score:187.4 best_domain_score:186.9 name:Na_H_Exchanger;
sprot_desc Na(+)/H(+) antiporter NhaS5;
sprot_id sp|Q55736|NHAS5_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55736|NHAS5_SYNY3 14 519 evalue:6.2e-73 qcov:70.30 identity:35.50;
tm_num 12;
5419 3257 transmembrane_helix
ID metaerg.pl|10728
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology o3293-3361i3380-3439o3452-3511i3545-3613o3641-3709i3722-3790o3833-3901i3935-4003o4076-4144i4163-4231o4274-4342i4376-4444o;
7368 5482 CDS
ID metaerg.pl|10729
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133816.1 1 628 evalue:0.0e+00 qcov:100.00 identity:90.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF04087;
pfam_desc Domain of unknown function (DUF389);
pfam_id DUF389;
pfam_target db:Pfam-A.hmm|PF04087.14 evalue:3.4e-35 score:120.4 best_domain_score:120.4 name:DUF389;
tm_num 6;
7368 5482 transmembrane_helix
ID metaerg.pl|10730
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i6517-6585o6595-6663i6697-6765o6883-6951i6970-7038o7081-7140i;
9599 7473 CDS
ID metaerg.pl|10731
allec_ids 5.4.99.2; 5.4.99.-;
allgo_ids GO:0031419; GO:0046872; GO:0004494;
allko_ids K01848; K01849; K11942; K14447; K01847; K01844;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133817.1 1 707 evalue:0.0e+00 qcov:99.90 identity:89.50;
kegg_pathway_id 00310; 00280; 00640;
kegg_pathway_name Lysine degradation; Valine, leucine and isoleucine degradation; Propanoate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id PWY-5203; PWY-6109; PWY-5130; PWY0-43; PWY-5992; PWY-5672; P108-PWY; PWY-6115; PWY-5328; PWY-5789; PWY-5377; PWY-6005; PWY-112; PWY-6008; PROPIONMET-PWY; PWY-5743; RIBOKIN-PWY;
metacyc_pathway_name soybean saponin I biosynthesis;; mangrove triterpenoid biosynthesis;; 2-oxobutanoate degradation I;; conversion of succinate to propanoate;; thalianol and derivatives biosynthesis;; ginsenosides biosynthesis;; pyruvate fermentation to propanoate I;; ; superpathway of L-methionine salvage and degradation;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; α-amyrin biosynthesis;; marneral biosynthesis;; lupeol biosynthesis;; baruol biosynthesis;; propanoyl CoA degradation I;; 3-hydroxypropanoate cycle;; ribose phosphorylation;;
metacyc_pathway_type TRITERPENOID-SYN;; TRITERPENOID-SYN;; 2-Oxobutanoate-Degradation; Super-Pathways;; SUCC-DEG;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; Pyruvate-Propanoate-Fermentation;; ; METHIONINE-DEG; Super-Pathways;; Autotrophic-CO2-Fixation;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; Propionate-Degradation;; Autotrophic-CO2-Fixation;; Sugars-And-Polysaccharides-Degradation;;
pfam_acc PF02310; PF01642;
pfam_desc B12 binding domain; Methylmalonyl-CoA mutase;
pfam_id B12-binding; MM_CoA_mutase;
pfam_target db:Pfam-A.hmm|PF02310.19 evalue:9.9e-14 score:50.7 best_domain_score:49.2 name:B12-binding; db:Pfam-A.hmm|PF01642.22 evalue:2.5e-235 score:781.1 best_domain_score:780.8 name:MM_CoA_mutase;
sprot_desc Methylmalonyl-CoA mutase large subunit;
sprot_id sp|Q59677|MUTB_PORGI;
sprot_target db:uniprot_sprot|sp|Q59677|MUTB_PORGI 22 706 evalue:4.4e-289 qcov:96.80 identity:72.30;
tigrfam_acc TIGR00640; TIGR00641;
tigrfam_desc methylmalonyl-CoA mutase C-terminal domain; methylmalonyl-CoA mutase N-terminal domain;
tigrfam_name acid_CoA_mut_C; acid_CoA_mut_N;
tigrfam_target db:TIGRFAMs.hmm|TIGR00640 evalue:1.6e-61 score:205.2 best_domain_score:204.0 name:TIGR00640; db:TIGRFAMs.hmm|TIGR00641 evalue:4.2e-269 score:892.3 best_domain_score:892.0 name:TIGR00641;
11014 9596 CDS
ID metaerg.pl|10732
allec_ids 5.4.99.2;
allgo_ids GO:0016866; GO:0031419; GO:0046872; GO:0004494; GO:0019652;
allko_ids K14447; K01847; K01849; K01848; K11942;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133818.1 1 472 evalue:8.1e-200 qcov:100.00 identity:71.40;
kegg_pathway_id 00640; 00280;
kegg_pathway_name Propanoate metabolism; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id PWY-5789; PWY-5743; PWY0-43; PWY-5130; PWY-5328; PROPIONMET-PWY; P108-PWY;
metacyc_pathway_name 3-hydroxypropanoate/4-hydroxybutanate cycle;; 3-hydroxypropanoate cycle;; conversion of succinate to propanoate;; 2-oxobutanoate degradation I;; superpathway of L-methionine salvage and degradation;; propanoyl CoA degradation I;; pyruvate fermentation to propanoate I;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; Autotrophic-CO2-Fixation;; SUCC-DEG;; 2-Oxobutanoate-Degradation; Super-Pathways;; METHIONINE-DEG; Super-Pathways;; Propionate-Degradation;; Pyruvate-Propanoate-Fermentation;;
pfam_acc PF01642;
pfam_desc Methylmalonyl-CoA mutase;
pfam_id MM_CoA_mutase;
pfam_target db:Pfam-A.hmm|PF01642.22 evalue:3.6e-66 score:223.0 best_domain_score:218.7 name:MM_CoA_mutase;
sprot_desc Methylmalonyl-CoA mutase small subunit;
sprot_id sp|Q59676|MUTA_PORGI;
sprot_target db:uniprot_sprot|sp|Q59676|MUTA_PORGI 2 435 evalue:1.2e-53 qcov:91.90 identity:32.30;
11114 11899 CDS
ID metaerg.pl|10733
allec_ids 3.1.3.6; 3.1.4.16; 3.1.3.5;
allgo_ids GO:0009166; GO:0016787; GO:0005618; GO:0005576; GO:0030288; GO:0008663; GO:0008254; GO:0008253; GO:0046872; GO:0000166;
allko_ids K08693; K01081; K08077; K01119;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133819.1 1 261 evalue:2.3e-119 qcov:100.00 identity:80.80;
kegg_pathway_id 00230; 00240; 00760;
kegg_pathway_name Purine metabolism; Pyrimidine metabolism; Nicotinate and nicotinamide metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id PWY-6353; URSIN-PWY; PWY-5381; PWY-5695; PWY-5044;
metacyc_pathway_name purine nucleotides degradation II (aerobic);; ureide biosynthesis;; pyridine nucleotide cycling (plants);; inosine 5'-phosphate degradation;; purine nucleotides degradation I (plants);;
metacyc_pathway_type Purine-Degradation; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; NAD-Metabolism;; Purine-Degradation;; Purine-Degradation; Super-Pathways;;
pfam_acc PF02872;
pfam_desc 5'-nucleotidase, C-terminal domain;
pfam_id 5_nucleotid_C;
pfam_target db:Pfam-A.hmm|PF02872.18 evalue:2.3e-25 score:88.9 best_domain_score:86.5 name:5_nucleotid_C;
sp YES;
sprot_desc Trifunctional nucleotide phosphoesterase protein YfkN;
sprot_id sp|O34313|NTPES_BACSU;
sprot_target db:uniprot_sprot|sp|O34313|NTPES_BACSU 44 259 evalue:1.2e-13 qcov:82.80 identity:27.10;
11114 11209 lipoprotein_signal_peptide
ID metaerg.pl|10734
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
11901 12812 CDS
ID metaerg.pl|10735
allec_ids 3.1.3.5;
allgo_ids GO:0016787; GO:0031225; GO:0008253; GO:0046872; GO:0000166; GO:0009166;
allko_ids K11751; K01081; K08693; K06931; K08077; K01119;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133820.1 1 302 evalue:5.3e-152 qcov:99.70 identity:86.10;
kegg_pathway_id 00760; 00240; 00230;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Pyrimidine metabolism; Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id PWY-5044; PWY-6353; URSIN-PWY; PWY-5381; PWY-5695;
metacyc_pathway_name purine nucleotides degradation I (plants);; purine nucleotides degradation II (aerobic);; ureide biosynthesis;; pyridine nucleotide cycling (plants);; inosine 5'-phosphate degradation;;
metacyc_pathway_type Purine-Degradation; Super-Pathways;; Purine-Degradation; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; NAD-Metabolism;; Purine-Degradation;;
pfam_acc PF00149; PF09587;
pfam_desc Calcineurin-like phosphoesterase; Bacterial capsule synthesis protein PGA_cap;
pfam_id Metallophos; PGA_cap;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:7e-17 score:61.8 best_domain_score:61.5 name:Metallophos; db:Pfam-A.hmm|PF09587.10 evalue:2.3e-06 score:26.5 best_domain_score:25.2 name:PGA_cap;
sp YES;
sprot_desc Snake venom 5'-nucleotidase;
sprot_id sp|B6EWW8|V5NTD_GLOBR;
sprot_target db:uniprot_sprot|sp|B6EWW8|V5NTD_GLOBR 35 292 evalue:8.2e-35 qcov:85.10 identity:32.30;
tm_num 1;
11901 11978 signal_peptide
ID metaerg.pl|10736
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
11901 12812 transmembrane_helix
ID metaerg.pl|10737
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i11919-11987o;
12929 14350 CDS
ID metaerg.pl|10738
allgo_ids GO:0005524; GO:0005737; GO:0003688; GO:0006270; GO:0006275;
allko_ids K02313;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133821.1 1 473 evalue:8.0e-264 qcov:100.00 identity:97.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00004; PF00308; PF08299; PF11638; PF01695;
pfam_desc ATPase family associated with various cellular activities (AAA); Bacterial dnaA protein; Bacterial dnaA protein helix-turn-helix; DnaA N-terminal domain; IstB-like ATP binding protein;
pfam_id AAA; Bac_DnaA; Bac_DnaA_C; DnaA_N; IstB_IS21;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:8e-07 score:28.8 best_domain_score:27.7 name:AAA; db:Pfam-A.hmm|PF00308.18 evalue:1.8e-84 score:282.2 best_domain_score:281.2 name:Bac_DnaA; db:Pfam-A.hmm|PF08299.11 evalue:6e-30 score:102.3 best_domain_score:101.1 name:Bac_DnaA_C; db:Pfam-A.hmm|PF11638.8 evalue:1e-19 score:69.2 best_domain_score:67.1 name:DnaA_N; db:Pfam-A.hmm|PF01695.17 evalue:4.1e-15 score:55.2 best_domain_score:54.4 name:IstB_IS21;
sprot_desc Chromosomal replication initiator protein DnaA;
sprot_id sp|A6GYW8|DNAA_FLAPJ;
sprot_target db:uniprot_sprot|sp|A6GYW8|DNAA_FLAPJ 1 470 evalue:4.1e-134 qcov:99.40 identity:48.30;
tigrfam_acc TIGR00362;
tigrfam_desc chromosomal replication initiator protein DnaA;
tigrfam_mainrole DNA metabolism;
tigrfam_name DnaA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00362 evalue:9.9e-162 score:538.1 best_domain_score:537.9 name:TIGR00362;
15057 14344 CDS
ID metaerg.pl|10739
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133822.1 2 237 evalue:3.1e-75 qcov:99.60 identity:59.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF11738; PF13739;
pfam_desc Protein of unknown function (DUF3298); Deacetylase PdaC;
pfam_id DUF3298; PdaC;
pfam_target db:Pfam-A.hmm|PF11738.8 evalue:9.9e-11 score:41.8 best_domain_score:35.0 name:DUF3298; db:Pfam-A.hmm|PF13739.6 evalue:2.8e-12 score:46.7 best_domain_score:46.7 name:PdaC;
16102 15095 CDS
ID metaerg.pl|10740
allec_ids 3.6.-.-; 2.7.-.-;
allgo_ids GO:0005524; GO:0005525; GO:0003924;
allko_ids K11942; K07588;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133823.1 1 332 evalue:9.0e-161 qcov:99.10 identity:86.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF02492; PF03308;
pfam_desc CobW/HypB/UreG, nucleotide-binding domain; Methylmalonyl Co-A mutase-associated GTPase MeaB;
pfam_id cobW; MeaB;
pfam_target db:Pfam-A.hmm|PF02492.19 evalue:7.6e-07 score:28.1 best_domain_score:25.6 name:cobW; db:Pfam-A.hmm|PF03308.16 evalue:1.5e-98 score:328.3 best_domain_score:327.9 name:MeaB;
sprot_desc Putative GTPase CC_2483;
sprot_id sp|P37895|Y2483_CAUVC;
sprot_target db:uniprot_sprot|sp|P37895|Y2483_CAUVC 6 326 evalue:1.6e-84 qcov:95.80 identity:52.00;
tigrfam_acc TIGR00750;
tigrfam_desc LAO/AO transport system ATPase;
tigrfam_mainrole Regulatory functions;
tigrfam_name lao;
tigrfam_sub1role Protein interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00750 evalue:4.4e-95 score:317.4 best_domain_score:317.2 name:TIGR00750;
16552 16136 CDS
ID metaerg.pl|10741
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133962.1 5 137 evalue:4.7e-55 qcov:96.40 identity:73.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
sp YES;
tm_num 1;
16136 16216 signal_peptide
ID metaerg.pl|10742
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
16552 16136 transmembrane_helix
ID metaerg.pl|10743
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology o16163-16216i;
16590 17126 CDS
ID metaerg.pl|10744
allgo_ids GO:0016021; GO:0005886;
allko_ids K08973;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035419.1 1 177 evalue:9.2e-80 qcov:99.40 identity:87.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF03653;
pfam_desc Uncharacterised protein family (UPF0093);
pfam_id UPF0093;
pfam_target db:Pfam-A.hmm|PF03653.13 evalue:3.9e-43 score:146.4 best_domain_score:145.8 name:UPF0093;
sprot_desc hypothetical protein;
sprot_id sp|P72793|Y1790_SYNY3;
sprot_target db:uniprot_sprot|sp|P72793|Y1790_SYNY3 1 173 evalue:3.5e-25 qcov:97.20 identity:40.30;
tm_num 5;
16590 17126 transmembrane_helix
ID metaerg.pl|10745
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology o16617-16676i16755-16823o16836-16904i16965-17021o17031-17099i;
17142 17816 CDS
ID metaerg.pl|10746
allgo_ids GO:0005886; GO:0046872; GO:0045454;
allko_ids K07152;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133825.1 1 224 evalue:6.5e-107 qcov:100.00 identity:82.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF02630;
pfam_desc SCO1/SenC;
pfam_id SCO1-SenC;
pfam_target db:Pfam-A.hmm|PF02630.14 evalue:2.3e-31 score:107.7 best_domain_score:107.3 name:SCO1-SenC;
sp YES;
sprot_desc SCO1 protein homolog;
sprot_id sp|P54178|SCO1_BACSU;
sprot_target db:uniprot_sprot|sp|P54178|SCO1_BACSU 51 216 evalue:3.2e-20 qcov:74.10 identity:32.70;
17142 17201 lipoprotein_signal_peptide
ID metaerg.pl|10747
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
17809 18261 CDS
ID metaerg.pl|10748
allgo_ids GO:0009055; GO:0020037;
allko_ids K05301; K00428; K00368; K00405; K15864; K02275;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133826.1 1 147 evalue:1.3e-66 qcov:98.00 identity:82.30;
kegg_pathway_id 00190; 00910; 00920;
kegg_pathway_name Oxidative phosphorylation; Nitrogen metabolism; Sulfur metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF13442; PF00034;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c;
pfam_id Cytochrome_CBB3; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:7.6e-09 score:35.0 best_domain_score:34.2 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:7.1e-07 score:29.5 best_domain_score:28.9 name:Cytochrom_C;
sp YES;
17809 17865 lipoprotein_signal_peptide
ID metaerg.pl|10749
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
18692 18258 CDS
ID metaerg.pl|10750
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133827.1 1 143 evalue:1.6e-45 qcov:99.30 identity:65.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
sp YES;
18258 18317 lipoprotein_signal_peptide
ID metaerg.pl|10751
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
18922 19746 CDS
ID metaerg.pl|10752
allec_ids 2.6.1.42;
allgo_ids GO:0003824; GO:0052656; GO:0052654; GO:0052655; GO:0009097; GO:0009098; GO:0009099;
allko_ids K00826;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133828.1 1 273 evalue:2.6e-134 qcov:99.60 identity:85.70;
kegg_pathway_id 00280; 00290; 00770;
kegg_pathway_name Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id BRANCHED-CHAIN-AA-SYN-PWY; LEU-DEG2-PWY; PWY-5078; VALSYN-PWY; PWY-5076; PWY0-1061; LEUSYN-PWY; PWY-5057; PWY-5103; PWY-5104; ILEUDEG-PWY; ILEUSYN-PWY; VALDEG-PWY; PWY-5101; PWY-5108; PWY-3001; ALANINE-VALINESYN-PWY; THREOCAT-PWY;
metacyc_pathway_name superpathway of branched chain amino acid biosynthesis;; L-leucine degradation I;; L-isoleucine degradation II;; L-valine biosynthesis;; L-leucine degradation III;; superpathway of L-alanine biosynthesis;; L-leucine biosynthesis;; L-valine degradation II;; L-isoleucine biosynthesis III;; L-isoleucine biosynthesis IV;; L-isoleucine degradation I;; L-isoleucine biosynthesis I (from threonine);; L-valine degradation I;; L-isoleucine biosynthesis II;; L-isoleucine biosynthesis V;; superpathway of L-isoleucine biosynthesis I;; L-alanine biosynthesis I;; superpathway of L-threonine metabolism;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; LEUCINE-DEG;; ISOLEUCINE-DEG;; VALINE-BIOSYNTHESIS;; LEUCINE-DEG;; ALANINE-SYN; Super-Pathways;; LEUCINE-SYN;; VALINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-DEG;; ISOLEUCINE-SYN;; VALINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; ALANINE-SYN;; Super-Pathways; THREONINE-DEG;;
pfam_acc PF01063;
pfam_desc Amino-transferase class IV;
pfam_id Aminotran_4;
pfam_target db:Pfam-A.hmm|PF01063.19 evalue:3.7e-45 score:153.7 best_domain_score:153.5 name:Aminotran_4;
sprot_desc Putative branched-chain-amino-acid aminotransferase;
sprot_id sp|O29329|ILVE_ARCFU;
sprot_target db:uniprot_sprot|sp|O29329|ILVE_ARCFU 4 269 evalue:6.1e-29 qcov:97.10 identity:30.50;
20196 19759 CDS
ID metaerg.pl|10753
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133963.1 1 145 evalue:3.4e-72 qcov:100.00 identity:93.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
sp YES;
19759 19821 signal_peptide
ID metaerg.pl|10754
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
21456 20230 CDS
ID metaerg.pl|10755
allgo_ids GO:0016020;
allko_ids K09808; K02004;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133829.1 1 408 evalue:7.5e-210 qcov:100.00 identity:92.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF02687; PF12704;
pfam_desc FtsX-like permease family; MacB-like periplasmic core domain;
pfam_id FtsX; MacB_PCD;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:5.9e-10 score:38.7 best_domain_score:38.7 name:FtsX; db:Pfam-A.hmm|PF12704.7 evalue:5.1e-11 score:42.5 best_domain_score:41.4 name:MacB_PCD;
tm_num 4;
21456 20230 transmembrane_helix
ID metaerg.pl|10756
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i20287-20346o21067-21135i21196-21264o21352-21420i;
22085 21453 CDS
ID metaerg.pl|10757
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0044873; GO:0042953;
allko_ids K02013; K05816; K02049; K02065; K01995; K10111; K01998; K02031; K11962; K02000; K01990; K02023; K02018; K02032; K02017; K02010; K05847; K01997; K02003; K02004; K02052; K02006; K02068; K11072; K02045; K02071; K06861; K01996; K09810;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133830.1 1 210 evalue:4.2e-100 qcov:100.00 identity:91.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id PWY-6135; PWY-6171; PWY-6166; PWY-6188; PWYG-321; PWY-6113;
metacyc_pathway_name ; ; ; ; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00005; PF01078;
pfam_desc ABC transporter; Magnesium chelatase, subunit ChlI;
pfam_id ABC_tran; Mg_chelatase;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:2.6e-33 score:114.6 best_domain_score:114.1 name:ABC_tran; db:Pfam-A.hmm|PF01078.21 evalue:8.9e-06 score:24.5 best_domain_score:22.5 name:Mg_chelatase;
sprot_desc Lipoprotein-releasing system ATP-binding protein LolD;
sprot_id sp|Q080S4|LOLD_SHEFN;
sprot_target db:uniprot_sprot|sp|Q080S4|LOLD_SHEFN 1 206 evalue:2.2e-34 qcov:98.10 identity:36.00;
23266 22088 CDS
ID metaerg.pl|10758
allgo_ids GO:0000155; GO:0007165;
allko_ids K07683; K11354; K07778; K11633; K07768; K08884; K00873; K07711; K11328; K13533; K02478; K07679; K07648; K07651; K07698; K07718; K07654; K07777; K07682; K07649; K00936; K03407; K07637; K07646; K07641; K13598; K07673; K08475; K07639; K07652; K07645; K07677; K07708; K10909; K07704; K08282; K07643; K11231; K13490; K02491; K11711; K07642; K02484; K11356; K11640; K14489; K02482; K08801; K02480; K07653; K07638; K07636; K13587; K11527; K02030; K07701; K07678; K10715; K02668; K03388; K08479; K07674; K10916; K02489; K07697; K11614; K07716; K07710; K07640; K01768; K07656; K11383; K02486; K12767; K07769; K11520; K14509; K04757; K02476; K11357; K10125; K11629; K07680; K07647; K10942; K13040; K11637; K07717; K07675; K01769; K07650; K07676; K10681; K06379; K13532; K07709; K07644;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035411.1 1 392 evalue:2.7e-201 qcov:100.00 identity:94.40;
kegg_pathway_id 05111; 00230; 00010; 00710; 00790; 04011; 02020; 03090; 00620;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Folate biosynthesis; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF02518; PF00512; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:2.3e-25 score:88.5 best_domain_score:87.3 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.7e-08 score:33.6 best_domain_score:33.6 name:HisKA; db:Pfam-A.hmm|PF00072.24 evalue:3.3e-19 score:68.4 best_domain_score:68.4 name:Response_reg;
26765 23319 CDS
ID metaerg.pl|10759
allgo_ids GO:0000155; GO:0007165;
allko_ids K07709; K13532; K07644; K01769; K07650; K06379; K10681; K07676; K07680; K07647; K10942; K13040; K07675; K07717; K12767; K11383; K02486; K11520; K07769; K14509; K11617; K04757; K10125; K11629; K11357; K07697; K02489; K07716; K07710; K07640; K07656; K01768; K02668; K03388; K08479; K07674; K10916; K02030; K11527; K13587; K10715; K07678; K08801; K02482; K14489; K02480; K07653; K07638; K07636; K02484; K11356; K04486; K11640; K11711; K07642; K07643; K11231; K02491; K07645; K07708; K07677; K07704; K10909; K08282; K07641; K13598; K07646; K08475; K07639; K07673; K07652; K07654; K07649; K07682; K00936; K07777; K03407; K07637; K07679; K02478; K07648; K07651; K07718; K07698; K07778; K07683; K11354; K07768; K11633; K00873; K07711; K08884; K13533; K11328;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133832.1 7 1148 evalue:0.0e+00 qcov:99.50 identity:77.60;
kegg_pathway_id 00710; 00010; 05111; 00230; 03090; 00620; 04011; 02020; 00340; 00790;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Vibrio cholerae pathogenic cycle; Purine metabolism; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Histidine metabolism; Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF02518; PF00512; PF13188; PF07494; PF07495;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain; Two component regulator propeller; Y_Y_Y domain;
pfam_id HATPase_c; HisKA; PAS_8; Reg_prop; Y_Y_Y;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:6.1e-25 score:87.1 best_domain_score:85.8 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.6e-18 score:65.7 best_domain_score:64.6 name:HisKA; db:Pfam-A.hmm|PF13188.7 evalue:5.3e-05 score:22.4 best_domain_score:21.1 name:PAS_8; db:Pfam-A.hmm|PF07494.11 evalue:1e-18 score:64.3 best_domain_score:14.8 name:Reg_prop; db:Pfam-A.hmm|PF07495.13 evalue:6e-10 score:38.2 best_domain_score:36.8 name:Y_Y_Y;
sp YES;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:3.3e-11 score:42.6 best_domain_score:41.3 name:TIGR00229;
tm_num 2;
23319 23393 signal_peptide
ID metaerg.pl|10760
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
26765 23319 transmembrane_helix
ID metaerg.pl|10761
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i23349-23402o25542-25610i;
26876 27757 CDS
ID metaerg.pl|10762
allec_ids 6.2.1.5; 6.2.1.-;
allgo_ids GO:0048037; GO:0005829; GO:0004550; GO:0000166; GO:0004775; GO:0009142; GO:0006105; GO:0006104; GO:0006099;
allko_ids K08692; K01902; K01899; K01900; K01903;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035409.1 1 293 evalue:3.1e-157 qcov:100.00 identity:98.30;
kegg_pathway_id 00720; 00640; 00660; 00630; 00020;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Propanoate metabolism; C5-Branched dibasic acid metabolism; Glyoxylate and dicarboxylate metabolism; Citrate cycle (TCA cycle);
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id PWY-6432; TCA-GLYOX-BYPASS; PWY-5690; PWY-6457; PWY-6146; P42-PWY; PWY-5913; PWY-5537; PWY-6443; CARNMET-PWY; TCA; PWY-5538; P601-PWY; PWY-6318; GLYCOLYSIS-TCA-GLYOX-BYPASS; P23-PWY; PWY-5464; PWY-5392; PWY-5958;
metacyc_pathway_name curcuminoid biosynthesis;; superpathway of glyoxylate bypass and TCA;; TCA cycle II (plants and fungi);; cinnamoyl-CoA biosynthesis;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; incomplete reductive TCA cycle;; partial TCA cycle (obligate autotrophs);; pyruvate fermentation to acetate V;; benzoate biosynthesis I (CoA-dependent, β-oxidative);; L-carnitine degradation I;; TCA cycle I (prokaryotic);; pyruvate fermentation to acetate VI;; (+)-camphor degradation;; L-phenylalanine degradation IV (mammalian, via side chain);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; reductive TCA cycle I;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; reductive TCA cycle II;; acridone alkaloid biosynthesis;;
metacyc_pathway_type POLYKETIDE-SYN; Super-Pathways;; Super-Pathways; TCA-VARIANTS;; TCA-VARIANTS;; AROMATIC-COMPOUNDS-BIOSYN; CINNAMATE-SYN;; Biosynthesis; Super-Pathways;; Reductive-TCA-Cycles;; TCA-VARIANTS;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Benzoate-Biosynthesis; Super-Pathways;; CARN-DEG;; TCA-VARIANTS;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Camphor-Degradation;; PHENYLALANINE-DEG;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; ALKALOIDS-SYN;;
pfam_acc PF02629; PF13380; PF00549; PF13607;
pfam_desc CoA binding domain; CoA binding domain; CoA-ligase; Succinyl-CoA ligase like flavodoxin domain;
pfam_id CoA_binding; CoA_binding_2; Ligase_CoA; Succ_CoA_lig;
pfam_target db:Pfam-A.hmm|PF02629.19 evalue:5.9e-31 score:106.3 best_domain_score:105.3 name:CoA_binding; db:Pfam-A.hmm|PF13380.6 evalue:1e-06 score:28.5 best_domain_score:26.0 name:CoA_binding_2; db:Pfam-A.hmm|PF00549.19 evalue:4.7e-17 score:61.5 best_domain_score:60.4 name:Ligase_CoA; db:Pfam-A.hmm|PF13607.6 evalue:6.2e-13 score:48.0 best_domain_score:46.9 name:Succ_CoA_lig;
sprot_desc Succinate--CoA ligase [ADP-forming] subunit alpha;
sprot_id sp|O67547|SUCD_AQUAE;
sprot_target db:uniprot_sprot|sp|O67547|SUCD_AQUAE 1 291 evalue:2.3e-98 qcov:99.30 identity:63.10;
tigrfam_acc TIGR01019;
tigrfam_desc succinate-CoA ligase, alpha subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name sucCoAalpha;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01019 evalue:1.3e-128 score:427.5 best_domain_score:427.3 name:TIGR01019;
28075 29478 CDS
ID metaerg.pl|10763
allgo_ids GO:0006814; GO:0006885; GO:0016021; GO:0005886; GO:0015297; GO:0015081;
allko_ids K03313;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Belliella;s__Belliella buryatensis;
genomedb_acc GCF_900188245.1;
genomedb_target db:genomedb|GCF_900188245.1|WP_089242173.1 1 451 evalue:1.3e-197 qcov:96.60 identity:80.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF06965;
pfam_desc Na+/H+ antiporter 1;
pfam_id Na_H_antiport_1;
pfam_target db:Pfam-A.hmm|PF06965.12 evalue:5.8e-135 score:449.2 best_domain_score:449.0 name:Na_H_antiport_1;
sprot_desc Na(+)/H(+) antiporter NhaA;
sprot_id sp|Q30XM9|NHAA_DESAG;
sprot_target db:uniprot_sprot|sp|Q30XM9|NHAA_DESAG 10 436 evalue:5.4e-94 qcov:91.40 identity:47.30;
tigrfam_acc TIGR00773;
tigrfam_desc Na+/H+ antiporter NhaA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name NhaA;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR00773 evalue:9.7e-114 score:379.4 best_domain_score:379.1 name:TIGR00773;
tm_num 12;
28075 29478 transmembrane_helix
ID metaerg.pl|10764
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i28135-28203o28213-28266i28279-28338o28381-28449i28468-28536o28564-28623i28642-28695o28723-28818i29017-29085o29128-29196i29230-29298o29326-29379i;
29841 29569 CDS
ID metaerg.pl|10765
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009035404.1 1 90 evalue:2.0e-35 qcov:100.00 identity:90.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
30089 30988 CDS
ID metaerg.pl|10766
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133835.1 10 298 evalue:1.0e-86 qcov:96.70 identity:54.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF13715;
pfam_desc CarboxypepD_reg-like domain;
pfam_id CarbopepD_reg_2;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:1.5e-10 score:40.2 best_domain_score:39.2 name:CarbopepD_reg_2;
sp YES;
tm_num 1;
30089 30172 signal_peptide
ID metaerg.pl|10767
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
30089 30988 transmembrane_helix
ID metaerg.pl|10768
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i30122-30190o;
31288 32922 CDS
ID metaerg.pl|10769
allec_ids 3.6.3.41;
allgo_ids GO:0005524; GO:0016887; GO:0009624;
allko_ids K01996; K06861; K02071; K11072; K02045; K02052; K02006; K02003; K01997; K05847; K02010; K02017; K02032; K05776; K02074; K02023; K02041; K01990; K10111; K01998; K01995; K02049; K02193; K05816; K02013; K09687;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106133837.1 1 544 evalue:1.4e-288 qcov:100.00 identity:93.60;
kegg_pathway_id 02010; 00910;
kegg_pathway_name ABC transporters - General; Nitrogen metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF13304; PF13476; PF13555; PF00005; PF12848; PF02463;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; P-loop containing region of AAA domain; ABC transporter; ABC transporter; RecF/RecN/SMC N terminal domain;
pfam_id AAA_21; AAA_23; AAA_29; ABC_tran; ABC_tran_Xtn; SMC_N;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.5e-12 score:47.2 best_domain_score:18.2 name:AAA_21; db:Pfam-A.hmm|PF13476.6 evalue:1.8e-08 score:34.3 best_domain_score:20.9 name:AAA_23; db:Pfam-A.hmm|PF13555.6 evalue:1.5e-09 score:36.7 best_domain_score:18.4 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:3.9e-50 score:169.2 best_domain_score:89.1 name:ABC_tran; db:Pfam-A.hmm|PF12848.7 evalue:3.4e-24 score:83.9 best_domain_score:83.9 name:ABC_tran_Xtn; db:Pfam-A.hmm|PF02463.19 evalue:3.6e-12 score:45.4 best_domain_score:22.6 name:SMC_N;
sprot_desc ABC transporter F family member 5;
sprot_id sp|Q9LV93|AB5F_ARATH;
sprot_target db:uniprot_sprot|sp|Q9LV93|AB5F_ARATH 2 544 evalue:6.5e-91 qcov:99.80 identity:35.20;
tigrfam_acc TIGR01189;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:4.9e-40 score:136.5 best_domain_score:55.8 name:TIGR01189;
33358 33597 CDS
ID metaerg.pl|10770
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Anditalea;s__Anditalea andensis;
genomedb_acc GCF_000714815.1;
genomedb_target db:genomedb|GCF_000714815.1|WP_035069507.1 1 79 evalue:3.5e-31 qcov:100.00 identity:96.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
33601 34005 CDS
ID metaerg.pl|10771
allec_ids 3.1.-.-;
allgo_ids GO:0000287; GO:0004540;
allko_ids K18828;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Anditalea;s__Anditalea andensis;
genomedb_acc GCF_000714815.1;
genomedb_target db:genomedb|GCF_000714815.1|WP_035069511.1 1 132 evalue:4.4e-66 qcov:98.50 identity:95.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01850;
pfam_desc PIN domain;
pfam_id PIN;
pfam_target db:Pfam-A.hmm|PF01850.21 evalue:4.8e-09 score:36.0 best_domain_score:35.7 name:PIN;
sprot_desc Ribonuclease VapC2;
sprot_id sp|Q4UNB2|VAPC2_RICFE;
sprot_target db:uniprot_sprot|sp|Q4UNB2|VAPC2_RICFE 1 130 evalue:1.0e-08 qcov:97.00 identity:33.30;
35078 34332 CDS
ID metaerg.pl|10772
allgo_ids GO:0015267; GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0006071;
allko_ids K02440;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134306.1 1 248 evalue:4.3e-128 qcov:100.00 identity:91.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00230;
pfam_desc Major intrinsic protein;
pfam_id MIP;
pfam_target db:Pfam-A.hmm|PF00230.20 evalue:5.1e-45 score:153.2 best_domain_score:153.0 name:MIP;
sprot_desc Probable glycerol uptake facilitator protein;
sprot_id sp|Q9X1E3|GLPF_THEMA;
sprot_target db:uniprot_sprot|sp|Q9X1E3|GLPF_THEMA 1 239 evalue:4.8e-65 qcov:96.40 identity:53.10;
tigrfam_acc TIGR00861;
tigrfam_desc MIP family channel proteins;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name MIP;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR00861 evalue:5.8e-51 score:172.6 best_domain_score:172.4 name:TIGR00861;
tm_num 6;
35078 34332 transmembrane_helix
ID metaerg.pl|10773
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology o34344-34412i34431-34499o34584-34643i34731-34799o34842-34910i34989-35057o;
36569 35079 CDS
ID metaerg.pl|10774
allec_ids 2.7.1.30;
allgo_ids GO:0005975; GO:0016773; GO:0005524; GO:0004370; GO:0019563; GO:0006071; GO:0006072;
allko_ids K00848; K11216; K00854; K00880; K00851; K00864;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034118.1 1 496 evalue:2.3e-266 qcov:100.00 identity:90.90;
kegg_pathway_id 00040; 00561; 00051; 00030;
kegg_pathway_name Pentose and glucuronate interconversions; Glycerolipid metabolism; Fructose and mannose metabolism; Pentose phosphate pathway;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id PWY0-381; PWY-4261;
metacyc_pathway_name glycerol and glycerophosphodiester degradation;; glycerol degradation I;;
metacyc_pathway_type GLYCEROL-DEG; Super-Pathways;; Fatty-Acid-and-Lipid-Degradation; GLYCEROL-DEG;;
pfam_acc PF02782; PF00370;
pfam_desc FGGY family of carbohydrate kinases, C-terminal domain; FGGY family of carbohydrate kinases, N-terminal domain;
pfam_id FGGY_C; FGGY_N;
pfam_target db:Pfam-A.hmm|PF02782.16 evalue:1.7e-60 score:203.4 best_domain_score:202.6 name:FGGY_C; db:Pfam-A.hmm|PF00370.21 evalue:1.1e-86 score:289.6 best_domain_score:289.2 name:FGGY_N;
sprot_desc Glycerol kinase;
sprot_id sp|A6LCZ1|GLPK_PARD8;
sprot_target db:uniprot_sprot|sp|A6LCZ1|GLPK_PARD8 2 496 evalue:7.0e-193 qcov:99.80 identity:64.00;
tigrfam_acc TIGR01311;
tigrfam_desc glycerol kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name glycerol_kin;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01311 evalue:1.6e-228 score:758.1 best_domain_score:758.0 name:TIGR01311;
38237 36672 CDS
ID metaerg.pl|10775
allec_ids 1.1.5.3;
allgo_ids GO:0016491; GO:0055114; GO:0009331; GO:0005739; GO:0005509; GO:0004368; GO:0004367; GO:0052591; GO:0019563; GO:0046168;
allko_ids K00111;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034119.1 1 520 evalue:2.9e-251 qcov:99.80 identity:83.70;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id PWY-4261; PWY-6118; PWY0-381;
metacyc_pathway_name glycerol degradation I;; glycerol-3-phosphate shuttle;; glycerol and glycerophosphodiester degradation;;
metacyc_pathway_type Fatty-Acid-and-Lipid-Degradation; GLYCEROL-DEG;; OTHER-ENERGY;; GLYCEROL-DEG; Super-Pathways;;
pfam_acc PF01266; PF16901; PF00890; PF12831;
pfam_desc FAD dependent oxidoreductase; C-terminal domain of alpha-glycerophosphate oxidase; FAD binding domain; FAD dependent oxidoreductase;
pfam_id DAO; DAO_C; FAD_binding_2; FAD_oxidored;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:3.3e-54 score:184.0 best_domain_score:183.1 name:DAO; db:Pfam-A.hmm|PF16901.5 evalue:3.2e-25 score:87.6 best_domain_score:86.7 name:DAO_C; db:Pfam-A.hmm|PF00890.24 evalue:3.2e-07 score:29.0 best_domain_score:22.8 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:4.9e-07 score:28.7 best_domain_score:24.5 name:FAD_oxidored;
sprot_desc Glycerol-3-phosphate dehydrogenase, mitochondrial;
sprot_id sp|A6QLU1|GPDM_BOVIN;
sprot_target db:uniprot_sprot|sp|A6QLU1|GPDM_BOVIN 17 512 evalue:2.1e-91 qcov:95.20 identity:39.40;
38373 39134 CDS
ID metaerg.pl|10776
allgo_ids GO:0003700; GO:0005622; GO:0006355; GO:0003677; GO:0045892; GO:0009401;
allko_ids K02468;
casgene_acc cls001593_casR_CAS-I;
casgene_name casR;
casgene_target db:casgenes.hmm|cls001593_casR_CAS-I evalue:2.1e-06 score:26.3 best_domain_score:25.3 name:casR;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Cecembia;s__Cecembia lonarensis;
genomedb_acc GCF_000298295.1;
genomedb_target db:genomedb|GCF_000298295.1|WP_009186586.1 1 253 evalue:9.3e-118 qcov:100.00 identity:87.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00455; PF08279; PF08220;
pfam_desc DeoR C terminal sensor domain; HTH domain; DeoR-like helix-turn-helix domain;
pfam_id DeoRC; HTH_11; HTH_DeoR;
pfam_target db:Pfam-A.hmm|PF00455.22 evalue:1.2e-51 score:174.1 best_domain_score:174.1 name:DeoRC; db:Pfam-A.hmm|PF08279.12 evalue:1.1e-08 score:34.2 best_domain_score:33.0 name:HTH_11; db:Pfam-A.hmm|PF08220.12 evalue:2.2e-15 score:55.4 best_domain_score:54.4 name:HTH_DeoR;
sprot_desc Glucitol operon repressor;
sprot_id sp|P15082|SRLR_ECOLI;
sprot_target db:uniprot_sprot|sp|P15082|SRLR_ECOLI 5 252 evalue:1.4e-35 qcov:98.00 identity:35.70;
39871 39353 CDS
ID metaerg.pl|10777
allko_ids K15634; K02226; K01834;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134310.1 4 172 evalue:7.3e-66 qcov:98.30 identity:72.80;
kegg_pathway_id 00860; 00010;
kegg_pathway_name Porphyrin and chlorophyll metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00300;
pfam_desc Histidine phosphatase superfamily (branch 1);
pfam_id His_Phos_1;
pfam_target db:Pfam-A.hmm|PF00300.22 evalue:7.4e-12 score:44.6 best_domain_score:29.9 name:His_Phos_1;
sp YES;
39353 39418 lipoprotein_signal_peptide
ID metaerg.pl|10778
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
40695 40021 CDS
ID metaerg.pl|10779
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034052.1 1 222 evalue:6.7e-104 qcov:99.10 identity:84.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
sp YES;
40021 40083 signal_peptide
ID metaerg.pl|10780
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
41243 40761 CDS
ID metaerg.pl|10781
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034053.1 1 159 evalue:7.2e-76 qcov:99.40 identity:95.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF16132;
pfam_desc Domain of unknown function (DUF4843);
pfam_id DUF4843;
pfam_target db:Pfam-A.hmm|PF16132.5 evalue:1.7e-07 score:30.2 best_domain_score:29.7 name:DUF4843;
sp YES;
40761 40814 lipoprotein_signal_peptide
ID metaerg.pl|10782
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
42799 41258 CDS
ID metaerg.pl|10783
allko_ids K08693; K01119;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034054.1 1 513 evalue:2.0e-276 qcov:100.00 identity:92.80;
kegg_pathway_id 00240; 00230;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF14322; PF07980;
pfam_desc Starch-binding associating with outer membrane; SusD family;
pfam_id SusD-like_3; SusD_RagB;
pfam_target db:Pfam-A.hmm|PF14322.6 evalue:7.3e-24 score:84.4 best_domain_score:83.8 name:SusD-like_3; db:Pfam-A.hmm|PF07980.11 evalue:4.1e-24 score:85.0 best_domain_score:75.5 name:SusD_RagB;
sp YES;
41258 41329 lipoprotein_signal_peptide
ID metaerg.pl|10784
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
45882 42811 CDS
ID metaerg.pl|10785
allgo_ids GO:0009279; GO:0005615; GO:0016021; GO:0019867; GO:0004181; GO:2001070; GO:0006518; GO:0016485; GO:0005983;
allko_ids K21573;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034055.1 1 1023 evalue:0.0e+00 qcov:100.00 identity:93.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF13715; PF13620; PF07715; PF00593;
pfam_desc CarboxypepD_reg-like domain; Carboxypeptidase regulatory-like domain; TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id CarbopepD_reg_2; CarboxypepD_reg; Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:2.5e-21 score:74.7 best_domain_score:73.2 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF13620.6 evalue:3.2e-11 score:42.6 best_domain_score:41.8 name:CarboxypepD_reg; db:Pfam-A.hmm|PF07715.15 evalue:8.1e-25 score:86.7 best_domain_score:86.7 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:4e-27 score:95.4 best_domain_score:95.4 name:TonB_dep_Rec;
sp YES;
sprot_desc TonB-dependent receptor SusC;
sprot_id sp|Q8A1G1|SUSC_BACTN;
sprot_target db:uniprot_sprot|sp|Q8A1G1|SUSC_BACTN 1 1023 evalue:5.7e-104 qcov:100.00 identity:30.70;
tigrfam_acc TIGR04056; TIGR04057;
tigrfam_desc TonB-linked outer membrane protein, SusC/RagA family; TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name OMP_RagA_SusC; SusC_RagA_signa;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR04056 evalue:2.2e-241 score:803.3 best_domain_score:803.1 name:TIGR04056; db:TIGRFAMs.hmm|TIGR04057 evalue:3e-18 score:64.5 best_domain_score:63.1 name:TIGR04057;
42811 42870 signal_peptide
ID metaerg.pl|10786
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
47536 46433 CDS
ID metaerg.pl|10787
allec_ids 2.4.1.182;
allgo_ids GO:0008915; GO:0009245;
allko_ids K00748;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034056.1 1 365 evalue:1.9e-172 qcov:99.50 identity:83.80;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id KDO-NAGLIPASYN-PWY; NAGLIPASYN-PWY; LPSSYN-PWY;
metacyc_pathway_name superpathway of (Kdo)2-lipid A biosynthesis;; lipid IVA biosynthesis;; superpathway of lipopolysaccharide biosynthesis;;
metacyc_pathway_type Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;;
pfam_acc PF02684;
pfam_desc Lipid-A-disaccharide synthetase;
pfam_id LpxB;
pfam_target db:Pfam-A.hmm|PF02684.15 evalue:8.8e-89 score:297.2 best_domain_score:296.9 name:LpxB;
sprot_desc Lipid-A-disaccharide synthase;
sprot_id sp|A0L8R9|LPXB_MAGMM;
sprot_target db:uniprot_sprot|sp|A0L8R9|LPXB_MAGMM 1 349 evalue:8.7e-47 qcov:95.10 identity:32.60;
tigrfam_acc TIGR00215;
tigrfam_desc lipid-A-disaccharide synthase;
tigrfam_mainrole Cell envelope;
tigrfam_name lpxB;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00215 evalue:3.2e-76 score:255.8 best_domain_score:255.3 name:TIGR00215;
47992 47573 CDS
ID metaerg.pl|10788
allec_ids 4.2.3.12;
allgo_ids GO:0005739; GO:0003874; GO:0046872; GO:0006728; GO:0006729;
allko_ids K01737;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Aquiflexum;s__Aquiflexum balticum;
genomedb_acc GCF_900176595.1;
genomedb_target db:genomedb|GCF_900176595.1|WP_084119767.1 1 139 evalue:3.5e-74 qcov:100.00 identity:91.40;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id PWY-5664; PWY-5663;
metacyc_pathway_name erythro-tetrahydrobiopterin biosynthesis II;; erythro-tetrahydrobiopterin biosynthesis I;;
metacyc_pathway_type Tetrahydrobiopterin-Biosynthesis;; Tetrahydrobiopterin-Biosynthesis;;
pfam_acc PF01242;
pfam_desc 6-pyruvoyl tetrahydropterin synthase;
pfam_id PTPS;
pfam_target db:Pfam-A.hmm|PF01242.19 evalue:4.7e-30 score:103.3 best_domain_score:103.2 name:PTPS;
sprot_desc 6-pyruvoyl tetrahydrobiopterin synthase;
sprot_id sp|P48611|PTPS_DROME;
sprot_target db:uniprot_sprot|sp|P48611|PTPS_DROME 6 138 evalue:4.3e-23 qcov:95.70 identity:37.60;
49995 48160 CDS
ID metaerg.pl|10789
allko_ids K02040;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106135643.1 1 611 evalue:0.0e+00 qcov:100.00 identity:90.80;
kegg_pathway_id 02010; 02020;
kegg_pathway_name ABC transporters - General; Two-component system - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00691; PF07676;
pfam_desc OmpA family; WD40-like Beta Propeller Repeat;
pfam_id OmpA; PD40;
pfam_target db:Pfam-A.hmm|PF00691.20 evalue:6.3e-22 score:77.0 best_domain_score:75.8 name:OmpA; db:Pfam-A.hmm|PF07676.12 evalue:6.3e-15 score:53.9 best_domain_score:29.4 name:PD40;
50717 50091 CDS
ID metaerg.pl|10790
allec_ids 4.3.99.3;
allgo_ids GO:0003824; GO:0051536; GO:0051539; GO:0016840; GO:0000287; GO:1904047; GO:0008616;
allko_ids K10026;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034059.1 1 208 evalue:8.2e-112 qcov:100.00 identity:90.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF13353; PF13394; PF04055;
pfam_desc 4Fe-4S single cluster domain; 4Fe-4S single cluster domain; Radical SAM superfamily;
pfam_id Fer4_12; Fer4_14; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF13353.6 evalue:1.9e-07 score:30.7 best_domain_score:30.2 name:Fer4_12; db:Pfam-A.hmm|PF13394.6 evalue:3.9e-15 score:55.3 best_domain_score:54.0 name:Fer4_14; db:Pfam-A.hmm|PF04055.21 evalue:2.3e-11 score:43.6 best_domain_score:43.3 name:Radical_SAM;
sprot_desc 7-carboxy-7-deazaguanine synthase;
sprot_id sp|A6H1N2|QUEE_FLAPJ;
sprot_target db:uniprot_sprot|sp|A6H1N2|QUEE_FLAPJ 6 208 evalue:3.4e-64 qcov:97.60 identity:56.70;
51883 50828 CDS
ID metaerg.pl|10791
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_016254480.1 72 351 evalue:3.0e-143 qcov:79.80 identity:88.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF01261;
pfam_desc Xylose isomerase-like TIM barrel;
pfam_id AP_endonuc_2;
pfam_target db:Pfam-A.hmm|PF01261.24 evalue:1.1e-14 score:53.6 best_domain_score:52.9 name:AP_endonuc_2;
52144 53397 CDS
ID metaerg.pl|10792
allec_ids 3.1.4.1; 3.6.1.9;
allgo_ids GO:0003824; GO:0005576; GO:0046872; GO:0035529; GO:0003676; GO:0004528; GO:0030247; GO:0005044; GO:0090729; GO:0006955;
allko_ids K01513; K01113;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034064.1 1 414 evalue:5.3e-211 qcov:99.30 identity:83.60;
kegg_pathway_id 00760; 00740; 00230; 00500; 00770;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Riboflavin metabolism; Purine metabolism; Starch and sucrose metabolism; Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF01663;
pfam_desc Type I phosphodiesterase / nucleotide pyrophosphatase;
pfam_id Phosphodiest;
pfam_target db:Pfam-A.hmm|PF01663.22 evalue:7.7e-73 score:245.3 best_domain_score:245.1 name:Phosphodiest;
sp YES;
sprot_desc Venom phosphodiesterase 1;
sprot_id sp|J3SEZ3|PDE1_CROAD;
sprot_target db:uniprot_sprot|sp|J3SEZ3|PDE1_CROAD 23 414 evalue:1.1e-53 qcov:94.00 identity:32.80;
52144 52206 signal_peptide
ID metaerg.pl|10793
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
53384 53791 CDS
ID metaerg.pl|10794
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034065.1 1 134 evalue:7.0e-64 qcov:99.30 identity:83.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
54421 53807 CDS
ID metaerg.pl|10795
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034066.1 1 204 evalue:8.6e-98 qcov:100.00 identity:86.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF03807;
pfam_desc NADP oxidoreductase coenzyme F420-dependent;
pfam_id F420_oxidored;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:2.6e-06 score:27.1 best_domain_score:26.5 name:F420_oxidored;
55701 54925 CDS
ID metaerg.pl|10796
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034067.1 1 257 evalue:4.6e-96 qcov:99.60 identity:69.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
tm_num 8;
55701 54925 transmembrane_helix
ID metaerg.pl|10797
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i54937-55005o55078-55146i55165-55233o55243-55311i55348-55407o55450-55509i55528-55581o55591-55659i;
55861 57195 CDS
ID metaerg.pl|10798
allgo_ids GO:0016787; GO:0016810; GO:0019700;
allko_ids K01468;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134260.1 10 444 evalue:5.3e-217 qcov:98.00 identity:86.40;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:1.2e-34 score:119.4 best_domain_score:119.0 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:1.1e-12 score:47.5 best_domain_score:25.7 name:Amidohydro_3;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P40896|YJV3_YEAST;
sprot_target db:uniprot_sprot|sp|P40896|YJV3_YEAST 106 439 evalue:1.2e-42 qcov:75.20 identity:33.50;
tm_num 1;
55861 55932 signal_peptide
ID metaerg.pl|10799
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
55861 57195 transmembrane_helix
ID metaerg.pl|10800
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i55879-55932o;
60299 57396 CDS
ID metaerg.pl|10801
allec_ids 2.7.7.7;
allgo_ids GO:0006260; GO:0008408; GO:0005737; GO:0003887;
allko_ids K14162; K02337; K02323; K03763;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Cecembia;s__Cecembia lonarensis;
genomedb_acc GCF_000298295.1;
genomedb_target db:genomedb|GCF_000298295.1|WP_009185508.1 1 965 evalue:0.0e+00 qcov:99.80 identity:91.00;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF07733; PF17657; PF14579; PF02811;
pfam_desc Bacterial DNA polymerase III alpha NTPase domain; Bacterial DNA polymerase III alpha subunit finger domain; Helix-hairpin-helix motif; PHP domain;
pfam_id DNA_pol3_alpha; DNA_pol3_finger; HHH_6; PHP;
pfam_target db:Pfam-A.hmm|PF07733.12 evalue:7.8e-60 score:201.9 best_domain_score:198.6 name:DNA_pol3_alpha; db:Pfam-A.hmm|PF17657.1 evalue:8.9e-36 score:122.0 best_domain_score:121.2 name:DNA_pol3_finger; db:Pfam-A.hmm|PF14579.6 evalue:3.7e-14 score:52.0 best_domain_score:50.7 name:HHH_6; db:Pfam-A.hmm|PF02811.19 evalue:8.1e-10 score:38.5 best_domain_score:37.1 name:PHP;
sprot_desc DNA polymerase III subunit alpha;
sprot_id sp|O67125|DPO3A_AQUAE;
sprot_target db:uniprot_sprot|sp|O67125|DPO3A_AQUAE 134 953 evalue:2.9e-89 qcov:84.80 identity:28.70;
tigrfam_acc TIGR00594;
tigrfam_desc DNA polymerase III, alpha subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name polc;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00594 evalue:9.7e-138 score:460.0 best_domain_score:432.4 name:TIGR00594;
61399 60602 CDS
ID metaerg.pl|10802
allgo_ids GO:0008654; GO:0016020; GO:0016780;
allko_ids K00998;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134268.1 1 256 evalue:1.5e-118 qcov:96.60 identity:84.80;
kegg_pathway_id 00260; 00564;
kegg_pathway_name Glycine, serine and threonine metabolism; Glycerophospholipid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF01066;
pfam_desc CDP-alcohol phosphatidyltransferase;
pfam_id CDP-OH_P_transf;
pfam_target db:Pfam-A.hmm|PF01066.21 evalue:9e-10 score:38.4 best_domain_score:38.4 name:CDP-OH_P_transf;
tm_num 4;
61399 60602 transmembrane_helix
ID metaerg.pl|10803
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i60713-60781o60905-60973i61202-61270o61298-61366i;
61670 62566 CDS
ID metaerg.pl|10804
allgo_ids GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134269.1 1 298 evalue:1.5e-162 qcov:100.00 identity:94.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00924;
pfam_desc Mechanosensitive ion channel;
pfam_id MS_channel;
pfam_target db:Pfam-A.hmm|PF00924.18 evalue:5.4e-29 score:100.4 best_domain_score:99.3 name:MS_channel;
tm_num 3;
61670 62566 transmembrane_helix
ID metaerg.pl|10805
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i61730-61798o61841-61900i61934-62002o;
63492 62656 CDS
ID metaerg.pl|10806
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_084328458.1 56 276 evalue:2.8e-107 qcov:79.50 identity:81.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
tm_num 1;
63492 62656 transmembrane_helix
ID metaerg.pl|10807
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i62674-62742o;
64084 63797 CDS
ID metaerg.pl|10808
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134272.1 1 95 evalue:1.4e-37 qcov:100.00 identity:88.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
tm_num 3;
64084 63797 transmembrane_helix
ID metaerg.pl|10809
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i63842-63910o63920-63988i64025-64078o;
65796 64087 CDS
ID metaerg.pl|10810
allec_ids 2.7.7.7; 3.1.11.1;
allgo_ids GO:0003677; GO:0003887; GO:0008852; GO:0046872; GO:0006281; GO:0006260;
allko_ids K04486; K02347;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034079.1 1 569 evalue:3.6e-271 qcov:100.00 identity:80.30;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00633; PF14520; PF14716;
pfam_desc Helix-hairpin-helix motif; Helix-hairpin-helix domain; Helix-hairpin-helix domain;
pfam_id HHH; HHH_5; HHH_8;
pfam_target db:Pfam-A.hmm|PF00633.23 evalue:7.2e-08 score:31.2 best_domain_score:25.0 name:HHH; db:Pfam-A.hmm|PF14520.6 evalue:6.5e-14 score:51.5 best_domain_score:36.7 name:HHH_5; db:Pfam-A.hmm|PF14716.6 evalue:3.5e-15 score:55.4 best_domain_score:49.0 name:HHH_8;
sprot_desc DNA polymerase/3'-5' exonuclease PolX;
sprot_id sp|P94544|POLX_BACSU;
sprot_target db:uniprot_sprot|sp|P94544|POLX_BACSU 1 562 evalue:4.7e-84 qcov:98.80 identity:32.80;
66090 66497 CDS
ID metaerg.pl|10811
allgo_ids GO:0005634;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034080.1 1 135 evalue:2.2e-49 qcov:100.00 identity:73.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF01878;
pfam_desc EVE domain;
pfam_id EVE;
pfam_target db:Pfam-A.hmm|PF01878.18 evalue:9.7e-43 score:144.9 best_domain_score:144.7 name:EVE;
sprot_desc Thymocyte nuclear protein 1;
sprot_id sp|Q90679|THYN1_CHICK;
sprot_target db:uniprot_sprot|sp|Q90679|THYN1_CHICK 3 132 evalue:9.1e-18 qcov:96.30 identity:35.60;
66494 68116 CDS
ID metaerg.pl|10812
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134273.1 1 540 evalue:1.6e-263 qcov:100.00 identity:80.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
sp YES;
66494 66550 signal_peptide
ID metaerg.pl|10813
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
68216 68758 CDS
ID metaerg.pl|10814
allec_ids 2.4.2.9;
allgo_ids GO:0009116; GO:0004845; GO:0006355;
allko_ids K02825;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134274.1 1 179 evalue:9.6e-93 qcov:99.40 identity:95.00;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id P1-PWY; PWY0-163;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:3.6e-17 score:61.6 best_domain_score:61.2 name:Pribosyltran;
sprot_desc Bifunctional protein PyrR;
sprot_id sp|A9A079|PYRR_DESOH;
sprot_target db:uniprot_sprot|sp|A9A079|PYRR_DESOH 1 162 evalue:4.3e-31 qcov:90.00 identity:44.20;
68767 69690 CDS
ID metaerg.pl|10815
allec_ids 2.1.3.2;
allgo_ids GO:0006520; GO:0016597; GO:0016743; GO:0004070; GO:0006207; GO:0044205;
allko_ids K11541; K00610; K01955; K01956; K01954; K00609; K11540;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134275.1 1 307 evalue:5.0e-166 qcov:100.00 identity:99.00;
kegg_pathway_id 00240; 00252; 00251;
kegg_pathway_name Pyrimidine metabolism; Alanine and aspartate metabolism; Glutamate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id PWY0-162; PWY-5686; PRPP-PWY;
metacyc_pathway_name superpathway of pyrimidine ribonucleotides de novo biosynthesis;; UMP biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; UMP-Biosynthesis;; Super-Pathways;;
pfam_acc PF00185; PF02729;
pfam_desc Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain;
pfam_id OTCace; OTCace_N;
pfam_target db:Pfam-A.hmm|PF00185.24 evalue:2.1e-24 score:85.6 best_domain_score:84.4 name:OTCace; db:Pfam-A.hmm|PF02729.21 evalue:3e-40 score:136.9 best_domain_score:135.8 name:OTCace_N;
sprot_desc Aspartate carbamoyltransferase;
sprot_id sp|Q11YY8|PYRB_CYTH3;
sprot_target db:uniprot_sprot|sp|Q11YY8|PYRB_CYTH3 1 305 evalue:1.5e-140 qcov:99.30 identity:80.30;
tigrfam_acc TIGR00670;
tigrfam_desc aspartate carbamoyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name asp_carb_tr;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00670 evalue:7.2e-96 score:320.0 best_domain_score:319.8 name:TIGR00670;
71144 69738 CDS
ID metaerg.pl|10816
allgo_ids GO:0005524; GO:0009376; GO:0016887; GO:0070011; GO:0043335;
allko_ids K03667;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134276.1 1 468 evalue:5.7e-246 qcov:100.00 identity:95.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00004; PF07724; PF07728; PF10431; PF00493; PF01078; PF05496;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); AAA domain (dynein-related subfamily); C-terminal, D2-small domain, of ClpB protein ; MCM P-loop domain; Magnesium chelatase, subunit ChlI; Holliday junction DNA helicase RuvB P-loop domain;
pfam_id AAA; AAA_2; AAA_5; ClpB_D2-small; MCM; Mg_chelatase; RuvB_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1.4e-16 score:60.3 best_domain_score:31.9 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:3.4e-48 score:163.2 best_domain_score:136.4 name:AAA_2; db:Pfam-A.hmm|PF07728.14 evalue:1.1e-06 score:28.0 best_domain_score:22.0 name:AAA_5; db:Pfam-A.hmm|PF10431.9 evalue:1.5e-06 score:27.4 best_domain_score:25.5 name:ClpB_D2-small; db:Pfam-A.hmm|PF00493.23 evalue:6.7e-06 score:24.6 best_domain_score:17.4 name:MCM; db:Pfam-A.hmm|PF01078.21 evalue:7e-05 score:21.5 best_domain_score:16.4 name:Mg_chelatase; db:Pfam-A.hmm|PF05496.12 evalue:9.4e-05 score:21.4 best_domain_score:17.0 name:RuvB_N;
sprot_desc ATP-dependent protease ATPase subunit HslU;
sprot_id sp|Q11QT3|HSLU_CYTH3;
sprot_target db:uniprot_sprot|sp|Q11QT3|HSLU_CYTH3 8 468 evalue:3.9e-177 qcov:98.50 identity:69.80;
tigrfam_acc TIGR00390;
tigrfam_desc ATP-dependent protease HslVU, ATPase subunit;
tigrfam_mainrole Protein fate;
tigrfam_name hslU;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR00390 evalue:3.5e-192 score:638.4 best_domain_score:638.2 name:TIGR00390;
72200 71160 CDS
ID metaerg.pl|10817
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134277.1 23 346 evalue:1.5e-166 qcov:93.60 identity:86.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
sp YES;
tm_num 1;
71160 71255 signal_peptide
ID metaerg.pl|10818
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
72200 71160 transmembrane_helix
ID metaerg.pl|10819
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i71193-71261o;
74701 72212 CDS
ID metaerg.pl|10820
allec_ids 3.4.21.53;
allgo_ids GO:0005524; GO:0005737; GO:0004176; GO:0043565; GO:0004252; GO:0034605; GO:0006515;
allko_ids K01338;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134278.1 1 829 evalue:0.0e+00 qcov:100.00 identity:94.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00004; PF07728; PF08298; PF13541; PF05362; PF02190;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); PrkA AAA domain; Subunit ChlI of Mg-chelatase; Lon protease (S16) C-terminal proteolytic domain; ATP-dependent protease La (LON) substrate-binding domain;
pfam_id AAA; AAA_5; AAA_PrkA; ChlI; Lon_C; LON_substr_bdg;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:2.9e-24 score:85.2 best_domain_score:83.8 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:5.9e-12 score:45.0 best_domain_score:43.4 name:AAA_5; db:Pfam-A.hmm|PF08298.11 evalue:6.5e-06 score:24.5 best_domain_score:22.7 name:AAA_PrkA; db:Pfam-A.hmm|PF13541.6 evalue:1.2e-07 score:30.9 best_domain_score:29.7 name:ChlI; db:Pfam-A.hmm|PF05362.13 evalue:1.8e-85 score:284.9 best_domain_score:284.0 name:Lon_C; db:Pfam-A.hmm|PF02190.16 evalue:4.2e-35 score:120.7 best_domain_score:119.6 name:LON_substr_bdg;
sprot_desc Lon protease;
sprot_id sp|Q11QT1|LON_CYTH3;
sprot_target db:uniprot_sprot|sp|Q11QT1|LON_CYTH3 22 826 evalue:0.0e+00 qcov:97.10 identity:67.70;
tigrfam_acc TIGR00763;
tigrfam_desc endopeptidase La;
tigrfam_mainrole Protein fate;
tigrfam_name lon;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00763 evalue:1.6e-283 score:942.2 best_domain_score:941.7 name:TIGR00763;
76491 75178 CDS
ID metaerg.pl|10821
allec_ids 3.4.24.-;
allgo_ids GO:0005515; GO:0016021; GO:0005886; GO:0046872; GO:0004222; GO:0008237; GO:0007165;
allko_ids K11749;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134279.1 1 437 evalue:7.4e-232 qcov:100.00 identity:92.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00595; PF13180; PF17820; PF02163;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Peptidase family M50;
pfam_id PDZ; PDZ_2; PDZ_6; Peptidase_M50;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:2.6e-10 score:39.8 best_domain_score:29.9 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:1.5e-14 score:53.3 best_domain_score:42.7 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:2.2e-15 score:55.4 best_domain_score:40.8 name:PDZ_6; db:Pfam-A.hmm|PF02163.22 evalue:3.2e-73 score:245.3 best_domain_score:245.1 name:Peptidase_M50;
sprot_desc Putative zinc metalloprotease PA3649;
sprot_id sp|Q9HXY3|Y3649_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HXY3|Y3649_PSEAE 1 434 evalue:2.6e-34 qcov:99.30 identity:25.90;
tigrfam_acc TIGR00054;
tigrfam_desc RIP metalloprotease RseP;
tigrfam_mainrole Protein fate;
tigrfam_name TIGR00054;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00054 evalue:4e-82 score:275.5 best_domain_score:275.0 name:TIGR00054;
tm_num 4;
76491 75178 transmembrane_helix
ID metaerg.pl|10822
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
topology i75196-75264o75478-75546i76255-76323o76417-76485i;
77657 76491 CDS
ID metaerg.pl|10823
allec_ids 1.1.1.267;
allgo_ids GO:0005515; GO:0030604; GO:0046872; GO:0070402; GO:0019288; GO:0016114;
allko_ids K00099;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_040489694.1 1 388 evalue:7.9e-201 qcov:100.00 identity:92.50;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
metacyc_pathway_id PWY-6270; NONMEVIPP-PWY; PWY-5121;
metacyc_pathway_name isoprene biosynthesis I;; methylerythritol phosphate pathway I;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);;
metacyc_pathway_type ISOPRENOIDS; Super-Pathways;; MEP-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;;
pfam_acc PF13288; PF08436; PF02670; PF01118;
pfam_desc DXP reductoisomerase C-terminal domain; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain; 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Semialdehyde dehydrogenase, NAD binding domain;
pfam_id DXPR_C; DXP_redisom_C; DXP_reductoisom; Semialdhyde_dh;
pfam_target db:Pfam-A.hmm|PF13288.6 evalue:1.8e-39 score:133.8 best_domain_score:132.9 name:DXPR_C; db:Pfam-A.hmm|PF08436.12 evalue:1.2e-40 score:136.7 best_domain_score:135.5 name:DXP_redisom_C; db:Pfam-A.hmm|PF02670.16 evalue:7.3e-45 score:152.1 best_domain_score:151.5 name:DXP_reductoisom; db:Pfam-A.hmm|PF01118.24 evalue:8.7e-06 score:25.4 best_domain_score:21.0 name:Semialdhyde_dh;
sprot_desc 1-deoxy-D-xylulose 5-phosphate reductoisomerase;
sprot_id sp|Q5L9P6|DXR_BACFN;
sprot_target db:uniprot_sprot|sp|Q5L9P6|DXR_BACFN 3 384 evalue:1.9e-140 qcov:98.50 identity:65.20;
tigrfam_acc TIGR00243;
tigrfam_desc 1-deoxy-D-xylulose 5-phosphate reductoisomerase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name Dxr;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00243 evalue:1.7e-143 score:477.3 best_domain_score:477.1 name:TIGR00243;
77846 79294 CDS
ID metaerg.pl|10824
allec_ids 3.4.21.107;
allgo_ids GO:0005515; GO:0042597; GO:0004252;
allko_ids K04771;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034090.1 1 482 evalue:6.5e-245 qcov:100.00 identity:87.30;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF00595; PF13180; PF17820; PF00089; PF13365;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Trypsin; Trypsin-like peptidase domain;
pfam_id PDZ; PDZ_2; PDZ_6; Trypsin; Trypsin_2;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:6.4e-09 score:35.3 best_domain_score:21.2 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:7e-16 score:57.6 best_domain_score:54.5 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:1.4e-06 score:27.2 best_domain_score:19.3 name:PDZ_6; db:Pfam-A.hmm|PF00089.26 evalue:3.4e-15 score:55.7 best_domain_score:54.5 name:Trypsin; db:Pfam-A.hmm|PF13365.6 evalue:9.5e-32 score:110.2 best_domain_score:109.6 name:Trypsin_2;
sp YES;
sprot_desc Probable periplasmic serine endoprotease DegP-like;
sprot_id sp|A6VUA4|DEGPL_MARMS;
sprot_target db:uniprot_sprot|sp|A6VUA4|DEGPL_MARMS 67 462 evalue:5.8e-67 qcov:82.20 identity:36.20;
77846 77917 signal_peptide
ID metaerg.pl|10825
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
79368 79781 CDS
ID metaerg.pl|10826
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034091.1 1 137 evalue:3.4e-66 qcov:100.00 identity:91.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF08780;
pfam_desc Nucleotidyltransferase substrate binding protein like;
pfam_id NTase_sub_bind;
pfam_target db:Pfam-A.hmm|PF08780.11 evalue:7e-19 score:67.3 best_domain_score:67.1 name:NTase_sub_bind;
79968 81242 CDS
ID metaerg.pl|10827
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009034092.1 1 424 evalue:9.1e-219 qcov:100.00 identity:87.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
pfam_acc PF08309;
pfam_desc LVIVD repeat;
pfam_id LVIVD;
pfam_target db:Pfam-A.hmm|PF08309.11 evalue:2.7e-10 score:38.6 best_domain_score:12.8 name:LVIVD;
sp YES;
79968 80048 lipoprotein_signal_peptide
ID metaerg.pl|10828
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
81246 81845 CDS
ID metaerg.pl|10829
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106134284.1 19 200 evalue:2.9e-82 qcov:91.00 identity:77.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
sp YES;
81246 81305 signal_peptide
ID metaerg.pl|10830
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.65441; 9.76883; 13.7038; 1.07565; 27.2026;
>Feature NODE_80_length_81434_cov_17.4195
2 733 CDS
ID metaerg.pl|10831
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015188; GO:0015190; GO:0015192; GO:0005304; GO:0042941; GO:0015808; GO:1903806; GO:1903805; GO:0098713;
allko_ids K02052; K02006; K01997; K02017; K01996; K02071; K06861; K02045; K01998; K10111; K02049; K01995; K02023; K11962;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW15585.1 1 242 evalue:2.5e-80 qcov:99.60 identity:65.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:5.2e-07 score:29.0 best_domain_score:16.2 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:4.3e-30 score:104.3 best_domain_score:103.8 name:ABC_tran;
sprot_desc High-affinity branched-chain amino acid transport ATP-binding protein BraF;
sprot_id sp|P21629|BRAF_PSEAE;
sprot_target db:uniprot_sprot|sp|P21629|BRAF_PSEAE 1 238 evalue:3.0e-35 qcov:97.90 identity:38.60;
726 1436 CDS
ID metaerg.pl|10832
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015658; GO:0042941; GO:0015808;
allko_ids K02045; K01996; K06861; K02071; K02017; K01997; K05847; K02010; K02006; K02052; K11962; K01990; K02023; K05816; K01995; K02049; K01998; K10111;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW15586.1 1 236 evalue:6.9e-99 qcov:100.00 identity:76.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1e-09 score:37.9 best_domain_score:20.4 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.1e-26 score:93.3 best_domain_score:92.8 name:ABC_tran;
sprot_desc High-affinity branched-chain amino acid transport ATP-binding protein BraG;
sprot_id sp|P21630|BRAG_PSEAE;
sprot_target db:uniprot_sprot|sp|P21630|BRAG_PSEAE 13 234 evalue:1.4e-42 qcov:94.10 identity:43.40;
2140 1469 CDS
ID metaerg.pl|10833
allgo_ids GO:0003700; GO:0006355; GO:0003677; GO:0042843; GO:0043469;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinophytocola;s__Actinophytocola xinjiangensis;
genomedb_acc GCF_001921215.1;
genomedb_target db:genomedb|GCF_001921215.1|WP_075132323.1 1 223 evalue:1.5e-66 qcov:100.00 identity:64.60;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:4.8e-15 score:55.3 best_domain_score:54.2 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:6.9e-21 score:72.9 best_domain_score:72.9 name:GntR;
sprot_desc Probable D-xylose utilization operon transcriptional repressor;
sprot_id sp|Q8GAL4|GNTR_PAENI;
sprot_target db:uniprot_sprot|sp|Q8GAL4|GNTR_PAENI 16 221 evalue:2.3e-26 qcov:92.40 identity:40.80;
2526 3329 CDS
ID metaerg.pl|10834
allec_ids 1.3.7.9;
allgo_ids GO:0016491; GO:0055114; GO:0051539; GO:0018525; GO:0071949; GO:0046872;
allko_ids K13479; K00106; K00087; K11178; K03519; K03518; K11177; K13482; K13481; K04109;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Streptosporangium;s__Streptosporangium subroseum;
genomedb_acc GCF_900188345.1;
genomedb_target db:genomedb|GCF_900188345.1|WP_089208633.1 1 266 evalue:2.4e-71 qcov:99.60 identity:56.40;
kegg_pathway_id 00983; 00633; 00632; 00230; 00680;
kegg_pathway_name Drug metabolism - other enzymes; Trinitrotoluene degradation; Benzoate degradation via CoA ligation; Purine metabolism; Methane metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF03450; PF00941;
pfam_desc CO dehydrogenase flavoprotein C-terminal domain; FAD binding domain in molybdopterin dehydrogenase;
pfam_id CO_deh_flav_C; FAD_binding_5;
pfam_target db:Pfam-A.hmm|PF03450.17 evalue:6.9e-22 score:76.8 best_domain_score:75.8 name:CO_deh_flav_C; db:Pfam-A.hmm|PF00941.21 evalue:1e-30 score:106.0 best_domain_score:105.2 name:FAD_binding_5;
sprot_desc 4-hydroxybenzoyl-CoA reductase subunit beta;
sprot_id sp|O33820|HCRB_THAAR;
sprot_target db:uniprot_sprot|sp|O33820|HCRB_THAAR 6 256 evalue:2.7e-13 qcov:94.00 identity:28.80;
3370 3900 CDS
ID metaerg.pl|10835
allec_ids 1.17.1.5;
allgo_ids GO:0009055; GO:0051536; GO:0051537; GO:0046872; GO:0050138; GO:0000166; GO:0051187;
allko_ids K00087; K00106; K13483; K13481; K13480; K13482; K03518; K20446;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Solirubrobacter;s__Solirubrobacter sp000425945;
genomedb_acc GCF_000425945.1;
genomedb_target db:genomedb|GCF_000425945.1|WP_028059246.1 1 157 evalue:9.8e-58 qcov:89.20 identity:70.70;
kegg_pathway_id 00230; 00680; 00983; 00633;
kegg_pathway_name Purine metabolism; Methane metabolism; Drug metabolism - other enzymes; Trinitrotoluene degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-5062;
metacyc_pathway_name superpathway of nicotinate degradation;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;;
pfam_acc PF00111; PF01799;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain;
pfam_id Fer2; Fer2_2;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:2.1e-06 score:26.8 best_domain_score:26.8 name:Fer2; db:Pfam-A.hmm|PF01799.20 evalue:6.8e-26 score:89.3 best_domain_score:89.3 name:Fer2_2;
sprot_desc Nicotinate dehydrogenase small FeS subunit;
sprot_id sp|Q0QLF3|NDSFS_EUBBA;
sprot_target db:uniprot_sprot|sp|Q0QLF3|NDSFS_EUBBA 1 157 evalue:1.8e-34 qcov:89.20 identity:47.10;
3900 5294 CDS
ID metaerg.pl|10836
allec_ids 1.17.1.5;
allgo_ids GO:0016491; GO:0055114; GO:0046872; GO:0050138; GO:0051187;
allko_ids K11178; K03519; K03520; K00157; K00087; K00106; K13481; K03518; K11177; K13482; K20447;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Solirubrobacter;s__Solirubrobacter sp000425945;
genomedb_acc GCF_000425945.1;
genomedb_target db:genomedb|GCF_000425945.1|WP_028059245.1 9 461 evalue:2.6e-211 qcov:97.60 identity:80.60;
kegg_pathway_id 00760; 00750; 00633; 00680; 00350; 00280; 00983; 00230; 00380;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Vitamin B6 metabolism; Trinitrotoluene degradation; Methane metabolism; Tyrosine metabolism; Valine, leucine and isoleucine degradation; Drug metabolism - other enzymes; Purine metabolism; Tryptophan metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-5062;
metacyc_pathway_name superpathway of nicotinate degradation;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;;
pfam_acc PF01315; PF02738;
pfam_desc Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; Molybdopterin-binding domain of aldehyde dehydrogenase;
pfam_id Ald_Xan_dh_C; Ald_Xan_dh_C2;
pfam_target db:Pfam-A.hmm|PF01315.22 evalue:2.3e-24 score:85.1 best_domain_score:83.8 name:Ald_Xan_dh_C; db:Pfam-A.hmm|PF02738.18 evalue:1.2e-80 score:270.7 best_domain_score:270.3 name:Ald_Xan_dh_C2;
sprot_desc Nicotinate dehydrogenase large molybdopterin subunit;
sprot_id sp|Q0QLF2|NDLMS_EUBBA;
sprot_target db:uniprot_sprot|sp|Q0QLF2|NDLMS_EUBBA 22 446 evalue:1.4e-62 qcov:91.60 identity:34.90;
5291 6304 CDS
ID metaerg.pl|10837
allec_ids 1.17.1.5;
allgo_ids GO:0016491; GO:0055114; GO:0046872; GO:0050138; GO:0051187;
allko_ids K11178; K00157; K03520; K00106; K00087; K13481; K03518; K11177; K13482; K20448;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__Solirubrobacterales;f__Solirubrobacteraceae;g__Solirubrobacter;s__Solirubrobacter sp000425945;
genomedb_acc GCF_000425945.1;
genomedb_target db:genomedb|GCF_000425945.1|WP_028059244.1 1 331 evalue:2.7e-165 qcov:98.20 identity:84.60;
kegg_pathway_id 00633; 00750; 00760; 00350; 00680; 00983; 00280; 00380; 00230;
kegg_pathway_name Trinitrotoluene degradation; Vitamin B6 metabolism; Nicotinate and nicotinamide metabolism; Tyrosine metabolism; Methane metabolism; Drug metabolism - other enzymes; Valine, leucine and isoleucine degradation; Tryptophan metabolism; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-5062;
metacyc_pathway_name superpathway of nicotinate degradation;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;;
pfam_acc PF02738;
pfam_desc Molybdopterin-binding domain of aldehyde dehydrogenase;
pfam_id Ald_Xan_dh_C2;
pfam_target db:Pfam-A.hmm|PF02738.18 evalue:4e-58 score:196.5 best_domain_score:196.1 name:Ald_Xan_dh_C2;
sprot_desc Nicotinate dehydrogenase medium molybdopterin subunit;
sprot_id sp|Q0QLF1|NDMMS_EUBBA;
sprot_target db:uniprot_sprot|sp|Q0QLF1|NDMMS_EUBBA 5 325 evalue:7.7e-42 qcov:95.30 identity:35.70;
6358 6660 CDS
ID metaerg.pl|10838
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Nonomuraea;s__Nonomuraea jiangxiensis;
genomedb_acc GCF_900099965.1;
genomedb_target db:genomedb|GCF_900099965.1|WP_090930878.1 1 100 evalue:5.8e-31 qcov:100.00 identity:69.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF07110; PF09448;
pfam_desc EthD domain; Methylmuconolactone methyl-isomerase;
pfam_id EthD; MmlI;
pfam_target db:Pfam-A.hmm|PF07110.11 evalue:2.6e-12 score:47.0 best_domain_score:44.8 name:EthD; db:Pfam-A.hmm|PF09448.10 evalue:3.1e-15 score:55.9 best_domain_score:50.9 name:MmlI;
tigrfam_acc TIGR02118;
tigrfam_desc conserved hypothetical protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR02118;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR02118 evalue:2.1e-15 score:56.4 best_domain_score:56.3 name:TIGR02118;
6657 7553 CDS
ID metaerg.pl|10839
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Streptosporangium;s__Streptosporangium subroseum;
genomedb_acc GCF_900188345.1;
genomedb_target db:genomedb|GCF_900188345.1|WP_089208712.1 18 293 evalue:3.1e-112 qcov:92.60 identity:72.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00004; PF07726; PF07728; PF05496;
pfam_desc ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); Holliday junction DNA helicase RuvB P-loop domain;
pfam_id AAA; AAA_3; AAA_5; RuvB_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:1.9e-09 score:37.3 best_domain_score:36.1 name:AAA; db:Pfam-A.hmm|PF07726.11 evalue:1.1e-08 score:34.2 best_domain_score:18.3 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:2.5e-13 score:49.4 best_domain_score:47.3 name:AAA_5; db:Pfam-A.hmm|PF05496.12 evalue:6.5e-06 score:25.2 best_domain_score:13.2 name:RuvB_N;
7582 8772 CDS
ID metaerg.pl|10840
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__20CM-4-69-9;f__20CM-4-69-9;g__PALSA-600;s__PALSA-600 sp003136795;
genomedb_acc GCA_003136795.1;
genomedb_target db:genomedb|GCA_003136795.1|PLDP01000022.1_19 7 394 evalue:2.0e-90 qcov:98.00 identity:50.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF05762;
pfam_desc VWA domain containing CoxE-like protein;
pfam_id VWA_CoxE;
pfam_target db:Pfam-A.hmm|PF05762.14 evalue:1.7e-54 score:183.8 best_domain_score:183.3 name:VWA_CoxE;
8769 9683 CDS
ID metaerg.pl|10841
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Streptosporangium;s__Streptosporangium subroseum;
genomedb_acc GCF_900188345.1;
genomedb_target db:genomedb|GCF_900188345.1|WP_089208627.1 2 304 evalue:3.2e-117 qcov:99.70 identity:64.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF04909;
pfam_desc Amidohydrolase;
pfam_id Amidohydro_2;
pfam_target db:Pfam-A.hmm|PF04909.14 evalue:5.5e-32 score:110.9 best_domain_score:110.7 name:Amidohydro_2;
9784 10629 CDS
ID metaerg.pl|10842
allec_ids 3.-.-.-;
allgo_ids GO:0003824; GO:0016787; GO:0046872;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Saccharopolyspora;s__Saccharopolyspora flava;
genomedb_acc GCF_900116135.1;
genomedb_target db:genomedb|GCF_900116135.1|WP_093414790.1 1 281 evalue:1.6e-107 qcov:100.00 identity:70.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF01557;
pfam_desc Fumarylacetoacetate (FAA) hydrolase family;
pfam_id FAA_hydrolase;
pfam_target db:Pfam-A.hmm|PF01557.18 evalue:4.9e-66 score:221.8 best_domain_score:221.4 name:FAA_hydrolase;
sprot_desc Fumarylacetoacetate hydrolase domain-containing protein 2 homolog;
sprot_id sp|Q54BF3|FAHD2_DICDI;
sprot_target db:uniprot_sprot|sp|Q54BF3|FAHD2_DICDI 61 272 evalue:2.1e-45 qcov:75.40 identity:43.80;
10704 11684 CDS
ID metaerg.pl|10843
allec_ids 1.1.1.26;
allgo_ids GO:0016616; GO:0051287; GO:0055114; GO:0005829; GO:0030267; GO:0047964; GO:0016618;
allko_ids K00018; K00058; K00015;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia sp001942185;
genomedb_acc GCF_001942185.1;
genomedb_target db:genomedb|GCF_001942185.1|WP_075955300.1 2 323 evalue:6.6e-108 qcov:98.80 identity:62.70;
kegg_pathway_id 00630; 00260;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00389; PF02826;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain;
pfam_id 2-Hacid_dh; 2-Hacid_dh_C;
pfam_target db:Pfam-A.hmm|PF00389.30 evalue:4.2e-30 score:103.4 best_domain_score:103.2 name:2-Hacid_dh; db:Pfam-A.hmm|PF02826.19 evalue:8.4e-60 score:200.4 best_domain_score:199.9 name:2-Hacid_dh_C;
sprot_desc Glyoxylate reductase;
sprot_id sp|B1L765|GYAR_KORCO;
sprot_target db:uniprot_sprot|sp|B1L765|GYAR_KORCO 2 323 evalue:2.5e-69 qcov:98.80 identity:47.80;
11838 12953 CDS
ID metaerg.pl|10844
allec_ids 2.2.1.2;
allgo_ids GO:0005975; GO:0005737; GO:0004801; GO:0006098;
allko_ids K00616;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Jatrophihabitantaceae;g__MT45;s__MT45 sp900230215;
genomedb_acc GCF_900230215.1;
genomedb_target db:genomedb|GCF_900230215.1|WP_096303812.1 7 367 evalue:9.1e-138 qcov:97.30 identity:67.60;
kegg_pathway_id 00030;
kegg_pathway_name Pentose phosphate pathway;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PENTOSE-P-PWY; PWY-5723; P185-PWY; NONOXIPENT-PWY; P124-PWY; PWY-1861;
metacyc_pathway_name pentose phosphate pathway;; Rubisco shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; pentose phosphate pathway (non-oxidative branch);; Bifidobacterium shunt;; formaldehyde assimilation II (assimilatory RuMP Cycle);;
metacyc_pathway_type Pentose-Phosphate-Cycle; Super-Pathways;; Energy-Metabolism;; Formaldehyde-Assimilation;; Pentose-Phosphate-Cycle;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;;
pfam_acc PF00923;
pfam_desc Transaldolase/Fructose-6-phosphate aldolase;
pfam_id TAL_FSA;
pfam_target db:Pfam-A.hmm|PF00923.19 evalue:6.1e-82 score:274.4 best_domain_score:274.2 name:TAL_FSA;
sprot_desc Transaldolase;
sprot_id sp|Q47ND3|TAL_THEFY;
sprot_target db:uniprot_sprot|sp|Q47ND3|TAL_THEFY 5 366 evalue:3.2e-134 qcov:97.60 identity:66.90;
tigrfam_acc TIGR00876;
tigrfam_desc transaldolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tal_mycobact;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00876 evalue:3.2e-126 score:420.5 best_domain_score:420.3 name:TIGR00876;
12962 14365 CDS
ID metaerg.pl|10845
allec_ids 1.6.5.2;
allgo_ids GO:0016491; GO:0055114; GO:0005623; GO:0009055; GO:0050660; GO:0003955; GO:0045454;
allko_ids K00363; K00362; K00382; K01008; K00266; K00529; K00356; K03885; K00384; K00383;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669573.1 4 463 evalue:1.1e-193 qcov:98.50 identity:77.00;
kegg_pathway_id 00360; 00190; 00071; 00251; 00252; 00620; 00450; 00910; 00020; 00240; 00260; 00280; 00480; 00010;
kegg_pathway_name Phenylalanine metabolism; Oxidative phosphorylation; Fatty acid metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Selenoamino acid metabolism; Nitrogen metabolism; Citrate cycle (TCA cycle); Pyrimidine metabolism; Glycine, serine and threonine metabolism; Valine, leucine and isoleucine degradation; Glutathione metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF01262; PF01134; PF13434; PF13241; PF13450; PF00070; PF07992; PF13738; PF02852;
pfam_desc Alanine dehydrogenase/PNT, C-terminal domain; Glucose inhibited division protein A; L-lysine 6-monooxygenase (NADPH-requiring); Putative NAD(P)-binding; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id AlaDh_PNT_C; GIDA; K_oxygenase; NAD_binding_7; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF01262.21 evalue:7.2e-06 score:24.7 best_domain_score:16.5 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF01134.22 evalue:4.4e-08 score:31.9 best_domain_score:21.2 name:GIDA; db:Pfam-A.hmm|PF13434.6 evalue:6e-05 score:21.6 best_domain_score:20.8 name:K_oxygenase; db:Pfam-A.hmm|PF13241.6 evalue:2.7e-05 score:23.8 best_domain_score:14.1 name:NAD_binding_7; db:Pfam-A.hmm|PF13450.6 evalue:7.6e-05 score:22.1 best_domain_score:10.3 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:1.9e-23 score:82.1 best_domain_score:61.8 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.7e-53 score:181.0 best_domain_score:181.0 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:3.1e-09 score:35.7 best_domain_score:24.2 name:Pyr_redox_3; db:Pfam-A.hmm|PF02852.22 evalue:3e-25 score:87.9 best_domain_score:86.7 name:Pyr_redox_dim;
sprot_desc NAD(P)H dehydrogenase (quinone);
sprot_id sp|P9WHH6|LPDA_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WHH6|LPDA_MYCTO 3 463 evalue:6.8e-113 qcov:98.70 identity:49.60;
14520 15212 CDS
ID metaerg.pl|10846
allgo_ids GO:0015035; GO:0005618; GO:0005737;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__QS-5-72-10;g__QS-5-72-10;s__QS-5-72-10 sp003021615;
genomedb_acc GCA_003021615.1;
genomedb_target db:genomedb|GCA_003021615.1|PSO47962.1 2 230 evalue:2.0e-71 qcov:99.60 identity:59.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF01323;
pfam_desc DSBA-like thioredoxin domain;
pfam_id DSBA;
pfam_target db:Pfam-A.hmm|PF01323.20 evalue:2.7e-06 score:26.5 best_domain_score:21.6 name:DSBA;
sprot_desc Thioredoxin-like reductase Rv2466c;
sprot_id sp|O53193|TRLR_MYCTU;
sprot_target db:uniprot_sprot|sp|O53193|TRLR_MYCTU 5 214 evalue:1.3e-27 qcov:91.30 identity:36.20;
17031 15253 CDS
ID metaerg.pl|10847
allec_ids 6.3.4.14;
allgo_ids GO:0005524; GO:0004075; GO:0046872; GO:0006633;
allko_ids K11541; K01571; K01965; K01941; K01457; K01955; K01959; K01966; K01954; K11540; K08289; K01968; K01960; K00609; K01958; K03416; K14541; K01964; K00658; K01956; K11263;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666126.1 1 590 evalue:6.8e-228 qcov:99.70 identity:70.30;
kegg_pathway_id 00240; 00020; 00670; 00230; 00280; 00310; 00061; 00640; 00252; 00220; 00251; 00330; 00620; 00791;
kegg_pathway_name Pyrimidine metabolism; Citrate cycle (TCA cycle); One carbon pool by folate; Purine metabolism; Valine, leucine and isoleucine degradation; Lysine degradation; Fatty acid biosynthesis; Propanoate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Glutamate metabolism; Arginine and proline metabolism; Pyruvate metabolism; Atrazine degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY0-1264;
metacyc_pathway_name biotin-carboxyl carrier protein assembly;;
metacyc_pathway_type Lipid-Biosynthesis;;
pfam_acc PF02222; PF02785; PF00289; PF00364; PF02786;
pfam_desc ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Biotin-requiring enzyme; Carbamoyl-phosphate synthase L chain, ATP binding domain;
pfam_id ATP-grasp; Biotin_carb_C; Biotin_carb_N; Biotin_lipoyl; CPSase_L_D2;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:2.2e-06 score:26.6 best_domain_score:25.3 name:ATP-grasp; db:Pfam-A.hmm|PF02785.19 evalue:1.6e-36 score:123.9 best_domain_score:121.5 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:1.4e-44 score:150.4 best_domain_score:148.8 name:Biotin_carb_N; db:Pfam-A.hmm|PF00364.22 evalue:4.4e-15 score:54.5 best_domain_score:53.4 name:Biotin_lipoyl; db:Pfam-A.hmm|PF02786.17 evalue:1.1e-74 score:249.8 best_domain_score:249.0 name:CPSase_L_D2;
sprot_desc Acetyl-/propionyl-coenzyme A carboxylase alpha chain;
sprot_id sp|P46392|BCCA_MYCLE;
sprot_target db:uniprot_sprot|sp|P46392|BCCA_MYCLE 5 588 evalue:3.6e-151 qcov:98.60 identity:51.60;
17249 17737 CDS
ID metaerg.pl|10848
allgo_ids GO:0005507; GO:0009055;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00127;
pfam_desc Copper binding proteins, plastocyanin/azurin family;
pfam_id Copper-bind;
pfam_target db:Pfam-A.hmm|PF00127.20 evalue:8.4e-06 score:25.4 best_domain_score:22.1 name:Copper-bind;
sp YES;
17249 17311 lipoprotein_signal_peptide
ID metaerg.pl|10849
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
17909 18424 CDS
ID metaerg.pl|10850
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666128.1 8 166 evalue:6.0e-36 qcov:93.00 identity:51.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
sp YES;
17909 17977 lipoprotein_signal_peptide
ID metaerg.pl|10851
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
18750 18511 CDS
ID metaerg.pl|10852
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
20303 18747 CDS
ID metaerg.pl|10853
allec_ids 6.4.1.3;
allgo_ids GO:0016829; GO:0004658;
allko_ids K01571; K01959; K15036; K01966; K01963; K03416; K19312;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666131.1 1 518 evalue:3.3e-255 qcov:100.00 identity:84.60;
kegg_pathway_id 00280; 00020; 00330; 00620; 00252; 00640; 00061; 00253;
kegg_pathway_name Valine, leucine and isoleucine degradation; Citrate cycle (TCA cycle); Arginine and proline metabolism; Pyruvate metabolism; Alanine and aspartate metabolism; Propanoate metabolism; Fatty acid biosynthesis; Tetracycline biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-5328; PROPIONMET-PWY; PWY-5743; PWY-5130; PWY-5789; PWYG-321; PWY-6113;
metacyc_pathway_name superpathway of L-methionine salvage and degradation;; propanoyl CoA degradation I;; 3-hydroxypropanoate cycle;; 2-oxobutanoate degradation I;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;;
metacyc_pathway_type METHIONINE-DEG; Super-Pathways;; Propionate-Degradation;; Autotrophic-CO2-Fixation;; 2-Oxobutanoate-Degradation; Super-Pathways;; Autotrophic-CO2-Fixation;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF01039;
pfam_desc Carboxyl transferase domain;
pfam_id Carboxyl_trans;
pfam_target db:Pfam-A.hmm|PF01039.22 evalue:1.4e-196 score:653.2 best_domain_score:653.0 name:Carboxyl_trans;
sprot_desc Propionyl-CoA carboxylase, carboxyltransferase subunit;
sprot_id sp|I3R7F1|PCCB_HALMT;
sprot_target db:uniprot_sprot|sp|I3R7F1|PCCB_HALMT 4 518 evalue:1.8e-194 qcov:99.40 identity:64.50;
20418 21224 CDS
ID metaerg.pl|10854
allec_ids 6.3.4.15;
allgo_ids GO:0006464; GO:0005524; GO:0004077; GO:0003677; GO:0009305; GO:0006355;
allko_ids K03524;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium;s__Corynebacterium sphenisci;
genomedb_acc GCF_001941505.1;
genomedb_target db:genomedb|GCF_001941505.1|WP_075692768.1 4 266 evalue:1.6e-35 qcov:98.10 identity:43.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY0-1264;
metacyc_pathway_name biotin-carboxyl carrier protein assembly;;
metacyc_pathway_type Lipid-Biosynthesis;;
pfam_acc PF02237; PF03099;
pfam_desc Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family;
pfam_id BPL_C; BPL_LplA_LipB;
pfam_target db:Pfam-A.hmm|PF02237.17 evalue:5.3e-08 score:31.9 best_domain_score:30.8 name:BPL_C; db:Pfam-A.hmm|PF03099.19 evalue:1.1e-09 score:37.5 best_domain_score:36.8 name:BPL_LplA_LipB;
sprot_desc Bifunctional ligase/repressor BirA;
sprot_id sp|P0CI75|BIRA_BACSU;
sprot_target db:uniprot_sprot|sp|P0CI75|BIRA_BACSU 24 258 evalue:7.1e-14 qcov:87.70 identity:28.20;
tigrfam_acc TIGR00121;
tigrfam_desc biotin--[acetyl-CoA-carboxylase] ligase;
tigrfam_mainrole Protein fate;
tigrfam_name birA_ligase;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00121 evalue:1.1e-41 score:142.1 best_domain_score:141.9 name:TIGR00121;
21291 22433 CDS
ID metaerg.pl|10855
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005886; GO:0003995; GO:0050660; GO:0052890;
allko_ids K00249; K11731; K11538; K08098; K06446; K00253; K00248; K11410; K09478; K00120; K00232; K00252; K14448;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666135.1 3 380 evalue:2.4e-178 qcov:99.50 identity:82.30;
kegg_pathway_id 00930; 00624; 00310; 01031; 00280; 00626; 00071; 00410; 00361; 00632; 00380; 00640; 00650; 00592; 01040; 00903;
kegg_pathway_name Caprolactam degradation; 1- and 2-Methylnaphthalene degradation; Lysine degradation; Glycan structures - biosynthesis 2; Valine, leucine and isoleucine degradation; Naphthalene and anthracene degradation; Fatty acid metabolism; beta-Alanine metabolism; gamma-Hexachlorocyclohexane degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Propanoate metabolism; Butanoate metabolism; alpha-Linolenic acid metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-2582; PWY-699; PWY-6544; CARNMET-PWY;
metacyc_pathway_name brassinosteroid biosynthesis II;; brassinosteroid biosynthesis I;; superpathway of C28 brassinosteroid biosynthesis;; L-carnitine degradation I;;
metacyc_pathway_type Brassinosteroid-Biosynthesis;; Brassinosteroid-Biosynthesis;; Super-Pathways;; CARN-DEG;;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:1.6e-46 score:157.5 best_domain_score:157.0 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:7.1e-18 score:64.4 best_domain_score:63.8 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:2.2e-18 score:65.5 best_domain_score:64.8 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:3.9e-35 score:120.1 best_domain_score:119.0 name:Acyl-CoA_dh_N;
sprot_desc Probable acyl-CoA dehydrogenase YngJ;
sprot_id sp|O34421|ACDC_BACSU;
sprot_target db:uniprot_sprot|sp|O34421|ACDC_BACSU 3 378 evalue:8.6e-98 qcov:98.90 identity:49.90;
22485 23279 CDS
ID metaerg.pl|10856
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666137.1 1 261 evalue:6.5e-98 qcov:98.90 identity:69.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
23299 23643 CDS
ID metaerg.pl|10857
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
tm_num 2;
23299 23643 transmembrane_helix
ID metaerg.pl|10858
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
topology i23470-23523o23566-23622i;
24877 23657 CDS
ID metaerg.pl|10859
allgo_ids GO:0006813; GO:0008324;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666138.1 1 399 evalue:1.6e-180 qcov:98.30 identity:82.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF01895; PF02080;
pfam_desc PhoU domain; TrkA-C domain;
pfam_id PhoU; TrkA_C;
pfam_target db:Pfam-A.hmm|PF01895.19 evalue:1.1e-17 score:63.4 best_domain_score:39.9 name:PhoU; db:Pfam-A.hmm|PF02080.21 evalue:5.3e-29 score:99.1 best_domain_score:52.7 name:TrkA_C;
26165 24879 CDS
ID metaerg.pl|10860
allgo_ids GO:0006812; GO:0008324;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666139.1 10 428 evalue:2.5e-171 qcov:97.90 identity:81.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF01769;
pfam_desc Divalent cation transporter;
pfam_id MgtE;
pfam_target db:Pfam-A.hmm|PF01769.16 evalue:2.3e-25 score:88.6 best_domain_score:53.8 name:MgtE;
tm_num 11;
26165 24879 transmembrane_helix
ID metaerg.pl|10861
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
topology i24990-25058o25116-25184i25242-25310o25338-25406i25443-25511o25524-25592i25629-25688o25716-25784i25866-25934o25977-26045i26082-26150o;
26330 28126 CDS
ID metaerg.pl|10862
allec_ids 1.3.8.-;
allgo_ids GO:0016627; GO:0055114; GO:0050660; GO:0052890;
allko_ids K14448; K06446; K00248; K00253; K11731; K00249; K20035;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666140.1 1 596 evalue:8.5e-255 qcov:99.70 identity:73.60;
kegg_pathway_id 00280; 00930; 00071; 00410; 00640; 00650;
kegg_pathway_name Valine, leucine and isoleucine degradation; Caprolactam degradation; Fatty acid metabolism; beta-Alanine metabolism; Propanoate metabolism; Butanoate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00441; PF08028; PF12806; PF02770; PF02771; PF12418;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acetyl-CoA dehydrogenase C-terminal like; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; Acyl-CoA dehydrogenase N terminal;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_C; Acyl-CoA_dh_M; Acyl-CoA_dh_N; AcylCoA_DH_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:5.8e-30 score:103.7 best_domain_score:101.9 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:3.5e-09 score:36.3 best_domain_score:34.9 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF12806.7 evalue:6.2e-23 score:80.5 best_domain_score:79.5 name:Acyl-CoA_dh_C; db:Pfam-A.hmm|PF02770.19 evalue:7.4e-18 score:63.8 best_domain_score:62.8 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:8e-15 score:54.7 best_domain_score:53.0 name:Acyl-CoA_dh_N; db:Pfam-A.hmm|PF12418.8 evalue:5e-07 score:28.9 best_domain_score:27.5 name:AcylCoA_DH_N;
sprot_desc 3-methylmercaptopropionyl-CoA dehydrogenase;
sprot_id sp|Q5LLW7|DMDC_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LLW7|DMDC_RUEPO 3 589 evalue:6.2e-143 qcov:98.20 identity:47.20;
28985 28269 CDS
ID metaerg.pl|10863
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666142.1 1 236 evalue:7.8e-58 qcov:99.20 identity:54.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
29234 30499 CDS
ID metaerg.pl|10864
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666143.1 3 420 evalue:2.5e-75 qcov:99.30 identity:44.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF13399; PF03816;
pfam_desc LytR cell envelope-related transcriptional attenuator; Cell envelope-related transcriptional attenuator domain;
pfam_id LytR_C; LytR_cpsA_psr;
pfam_target db:Pfam-A.hmm|PF13399.6 evalue:1e-12 score:48.1 best_domain_score:46.2 name:LytR_C; db:Pfam-A.hmm|PF03816.14 evalue:4.8e-08 score:32.5 best_domain_score:31.8 name:LytR_cpsA_psr;
tm_num 1;
29234 30499 transmembrane_helix
ID metaerg.pl|10865
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
topology i29294-29362o;
30510 31817 CDS
ID metaerg.pl|10866
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666144.1 2 432 evalue:1.5e-99 qcov:99.10 identity:47.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF03816;
pfam_desc Cell envelope-related transcriptional attenuator domain;
pfam_id LytR_cpsA_psr;
pfam_target db:Pfam-A.hmm|PF03816.14 evalue:1.1e-33 score:115.8 best_domain_score:115.2 name:LytR_cpsA_psr;
sp YES;
tigrfam_acc TIGR00350;
tigrfam_desc cell envelope-related function transcriptional attenuator common domain;
tigrfam_mainrole Regulatory functions;
tigrfam_name lytR_cpsA_psr;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00350 evalue:1.1e-29 score:102.8 best_domain_score:102.1 name:TIGR00350;
30510 30644 signal_peptide
ID metaerg.pl|10867
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
31814 32746 CDS
ID metaerg.pl|10868
allec_ids 2.4.1.289;
allgo_ids GO:0016757; GO:0102096;
allko_ids K00710; K00721; K16870;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441426.1 7 307 evalue:4.4e-77 qcov:97.10 identity:57.90;
kegg_pathway_id 01030; 00510;
kegg_pathway_name Glycan structures - biosynthesis 1; N-Glycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00535; PF13641; PF13506; PF13632;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family 21; Glycosyl transferase family group 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3; Glyco_transf_21; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.8e-19 score:69.4 best_domain_score:69.0 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:3.1e-19 score:69.0 best_domain_score:68.4 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13506.6 evalue:4.7e-09 score:35.2 best_domain_score:32.8 name:Glyco_transf_21; db:Pfam-A.hmm|PF13632.6 evalue:5.6e-09 score:35.4 best_domain_score:33.7 name:Glyco_trans_2_3;
sprot_desc N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase;
sprot_id sp|P9WMY2|WBBL_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WMY2|WBBL_MYCTO 24 299 evalue:4.9e-35 qcov:89.00 identity:38.40;
32781 33881 CDS
ID metaerg.pl|10869
allec_ids 2.7.7.13;
allgo_ids GO:0009058; GO:0016779; GO:0005525; GO:0004475; GO:0009298;
allko_ids K00677; K00640; K00975; K01840; K04042; K02536; K11528; K00966; K00972;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441427.1 3 363 evalue:4.6e-118 qcov:98.60 identity:65.90;
kegg_pathway_id 00920; 00051; 00530; 00500; 00272; 00540;
kegg_pathway_name Sulfur metabolism; Fructose and mannose metabolism; Aminosugars metabolism; Starch and sucrose metabolism; Cysteine metabolism; Lipopolysaccharide biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-5659; COLANSYN-PWY; PWY-882;
metacyc_pathway_name GDP-mannose biosynthesis;; colanic acid building blocks biosynthesis;; L-ascorbate biosynthesis I (L-galactose pathway);;
metacyc_pathway_type GDP-Sugar-Biosynthesis;; Carbohydrates-Biosynthesis; Super-Pathways;; Ascorbate-Biosynthesis;;
pfam_acc PF00132; PF00483; PF12804;
pfam_desc Bacterial transferase hexapeptide (six repeats); Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id Hexapep; NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:3.8e-11 score:41.5 best_domain_score:21.6 name:Hexapep; db:Pfam-A.hmm|PF00483.23 evalue:9.7e-34 score:116.3 best_domain_score:115.8 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:1.8e-13 score:50.4 best_domain_score:50.4 name:NTP_transf_3;
sprot_desc Probable mannose-1-phosphate guanylyltransferase 1;
sprot_id sp|Q84JH5|GMPP1_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q84JH5|GMPP1_ORYSJ 6 307 evalue:1.6e-32 qcov:82.50 identity:31.70;
34170 35057 CDS
ID metaerg.pl|10870
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441428.1 5 295 evalue:4.7e-105 qcov:98.60 identity:71.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF01061;
pfam_desc ABC-2 type transporter;
pfam_id ABC2_membrane;
pfam_target db:Pfam-A.hmm|PF01061.24 evalue:1.7e-19 score:69.3 best_domain_score:69.3 name:ABC2_membrane;
tm_num 6;
34170 35057 transmembrane_helix
ID metaerg.pl|10871
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
topology i34305-34373o34383-34451i34539-34607o34650-34718i34737-34805o34956-35024i;
35059 36369 CDS
ID metaerg.pl|10872
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0015774;
allko_ids K09691; K01995; K02006; K02045; K09693;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666150.1 7 436 evalue:8.3e-191 qcov:98.60 identity:79.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00005; PF14524;
pfam_desc ABC transporter; Wzt C-terminal domain;
pfam_id ABC_tran; Wzt_C;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:3e-19 score:69.1 best_domain_score:66.9 name:ABC_tran; db:Pfam-A.hmm|PF14524.6 evalue:8.7e-17 score:60.7 best_domain_score:60.1 name:Wzt_C;
sprot_desc O-antigen export system ATP-binding protein RfbB;
sprot_id sp|Q50863|RFBB_MYXXA;
sprot_target db:uniprot_sprot|sp|Q50863|RFBB_MYXXA 17 374 evalue:4.5e-58 qcov:82.10 identity:37.20;
36378 37421 CDS
ID metaerg.pl|10873
allko_ids K00694;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441429.1 2 346 evalue:1.4e-76 qcov:99.40 identity:51.30;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00535; PF13641;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:7.5e-21 score:73.9 best_domain_score:73.3 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:1.1e-16 score:60.7 best_domain_score:59.5 name:Glyco_tranf_2_3;
38492 37542 CDS
ID metaerg.pl|10874
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666152.1 1 307 evalue:1.5e-72 qcov:97.20 identity:56.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF11303;
pfam_desc Protein of unknown function (DUF3105);
pfam_id DUF3105;
pfam_target db:Pfam-A.hmm|PF11303.8 evalue:3.2e-13 score:49.2 best_domain_score:48.7 name:DUF3105;
tm_num 1;
38492 37542 transmembrane_helix
ID metaerg.pl|10875
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
topology i37647-37715o;
39913 38594 CDS
ID metaerg.pl|10876
allec_ids 6.3.2.31; 6.3.2.34; 1.3.8.-;
allgo_ids GO:0043773; GO:0052618; GO:0052619; GO:0005525; GO:0046872; GO:0016491; GO:0009108; GO:0052645;
allko_ids K12234;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666153.1 1 436 evalue:1.5e-155 qcov:99.30 identity:68.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-5199;
metacyc_pathway_name factor 420 polyglutamylation;;
metacyc_pathway_type Cofactor-Biosynthesis;;
pfam_acc PF01996; PF00881;
pfam_desc F420-0:Gamma-glutamyl ligase; Nitroreductase family;
pfam_id F420_ligase; Nitroreductase;
pfam_target db:Pfam-A.hmm|PF01996.16 evalue:2.1e-43 score:147.7 best_domain_score:121.3 name:F420_ligase; db:Pfam-A.hmm|PF00881.24 evalue:6.7e-24 score:84.1 best_domain_score:83.4 name:Nitroreductase;
sprot_desc Bifunctional F420 biosynthesis protein FbiB;
sprot_id sp|A0QKC8|FBIB_MYCA1;
sprot_target db:uniprot_sprot|sp|A0QKC8|FBIB_MYCA1 5 436 evalue:1.2e-95 qcov:98.40 identity:48.80;
tigrfam_acc TIGR01916;
tigrfam_desc coenzyme F420-0:L-glutamate ligase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name F420_cofE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01916 evalue:5.6e-59 score:198.7 best_domain_score:196.2 name:TIGR01916;
40872 39910 CDS
ID metaerg.pl|10877
allec_ids 2.7.8.28;
allgo_ids GO:0043743; GO:0000287; GO:0016780; GO:0009108;
allko_ids K11212;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666154.1 1 310 evalue:3.3e-128 qcov:96.90 identity:76.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-5198;
metacyc_pathway_name factor 420 biosynthesis;;
metacyc_pathway_type Cofactor-Biosynthesis;;
pfam_acc PF01933;
pfam_desc Uncharacterised protein family UPF0052;
pfam_id UPF0052;
pfam_target db:Pfam-A.hmm|PF01933.18 evalue:5.8e-54 score:182.5 best_domain_score:182.2 name:UPF0052;
sprot_desc Phosphoenolpyruvate transferase;
sprot_id sp|B1VUV4|FBIA_STRGG;
sprot_target db:uniprot_sprot|sp|B1VUV4|FBIA_STRGG 4 310 evalue:8.9e-80 qcov:95.90 identity:51.90;
tigrfam_acc TIGR01819;
tigrfam_desc 2-phospho-L-lactate transferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name F420_cofD;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01819 evalue:2.4e-104 score:347.7 best_domain_score:347.5 name:TIGR01819;
40976 43552 CDS
ID metaerg.pl|10878
allec_ids 4.3.1.32; 2.5.1.147; 2.5.1.77;
allgo_ids GO:0003824; GO:0051536; GO:0051539; GO:0016829; GO:0046872; GO:0016765; GO:0009108;
allko_ids K11779;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669576.1 8 858 evalue:0.0e+00 qcov:99.20 identity:80.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-5198;
metacyc_pathway_name factor 420 biosynthesis;;
metacyc_pathway_type Cofactor-Biosynthesis;;
pfam_acc PF04055;
pfam_desc Radical SAM superfamily;
pfam_id Radical_SAM;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:6.5e-28 score:97.4 best_domain_score:57.1 name:Radical_SAM;
sprot_desc FO synthase;
sprot_id sp|Q82GV2|FBIC_STRAW;
sprot_target db:uniprot_sprot|sp|Q82GV2|FBIC_STRAW 2 854 evalue:1.7e-271 qcov:99.40 identity:58.10;
tigrfam_acc TIGR00423; TIGR03550; TIGR03551;
tigrfam_desc radical SAM domain protein, CofH subfamily; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit;
tigrfam_mainrole Hypothetical proteins; Biosynthesis of cofactors, prosthetic groups, and carriers; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00423; F420_cofG; F420_cofH;
tigrfam_sub1role Conserved; Other; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00423 evalue:9.3e-124 score:411.8 best_domain_score:368.8 name:TIGR00423; db:TIGRFAMs.hmm|TIGR03550 evalue:2.1e-145 score:483.0 best_domain_score:451.8 name:TIGR03550; db:TIGRFAMs.hmm|TIGR03551 evalue:9.1e-167 score:553.3 best_domain_score:511.7 name:TIGR03551;
43807 44436 CDS
ID metaerg.pl|10879
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0003677; GO:0016987;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669577.1 29 209 evalue:3.1e-79 qcov:86.60 identity:85.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF07638; PF04542; PF04545; PF08281;
pfam_desc ECF sigma factor; Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_ECF; Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF07638.11 evalue:3e-05 score:23.2 best_domain_score:22.1 name:Sigma70_ECF; db:Pfam-A.hmm|PF04542.14 evalue:6.4e-19 score:66.7 best_domain_score:65.5 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:6.7e-16 score:56.8 best_domain_score:53.4 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:1.1e-14 score:53.0 best_domain_score:52.4 name:Sigma70_r4_2;
sprot_desc ECF RNA polymerase sigma factor SigK;
sprot_id sp|Q7U1Z6|SIGK_MYCBO;
sprot_target db:uniprot_sprot|sp|Q7U1Z6|SIGK_MYCBO 33 205 evalue:2.9e-31 qcov:82.80 identity:44.50;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:5.9e-27 score:93.5 best_domain_score:93.3 name:TIGR02937;
44734 45000 CDS
ID metaerg.pl|10880
allgo_ids GO:0005737; GO:0051539; GO:0035731; GO:0003677; GO:0046872; GO:0006355;
allko_ids K18955;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441430.1 4 88 evalue:1.4e-36 qcov:96.60 identity:88.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF02467;
pfam_desc Transcription factor WhiB;
pfam_id Whib;
pfam_target db:Pfam-A.hmm|PF02467.16 evalue:5e-27 score:93.5 best_domain_score:93.2 name:Whib;
sprot_desc Transcriptional regulator WhiB2;
sprot_id sp|A0QTG3|WHIB2_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QTG3|WHIB2_MYCS2 11 85 evalue:2.6e-26 qcov:85.20 identity:72.00;
45269 48343 CDS
ID metaerg.pl|10881
allko_ids K00698; K12997;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441431.1 10 1023 evalue:3.8e-295 qcov:99.00 identity:56.50;
kegg_pathway_id 00530;
kegg_pathway_name Aminosugars metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00535; PF13641;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:5.7e-16 score:58.0 best_domain_score:57.2 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:1.9e-16 score:59.9 best_domain_score:58.9 name:Glyco_tranf_2_3;
tm_num 12;
45269 48343 transmembrane_helix
ID metaerg.pl|10882
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
topology o46046-46114i46415-46483o46649-46708i46745-46804o46814-46873i46892-46951o46961-47020i47039-47107o47198-47266i47285-47344o47387-47455i47474-47542o;
48340 50031 CDS
ID metaerg.pl|10883
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666157.1 11 556 evalue:1.8e-97 qcov:97.00 identity:42.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
sp YES;
tm_num 1;
48340 48408 signal_peptide
ID metaerg.pl|10884
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
48340 50031 transmembrane_helix
ID metaerg.pl|10885
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
topology i48358-48411o;
50568 50080 CDS
ID metaerg.pl|10886
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441432.1 2 162 evalue:5.9e-25 qcov:99.40 identity:45.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF06262;
pfam_desc Zincin-like metallopeptidase;
pfam_id Zincin_1;
pfam_target db:Pfam-A.hmm|PF06262.11 evalue:2.6e-11 score:42.7 best_domain_score:37.2 name:Zincin_1;
51159 50686 CDS
ID metaerg.pl|10887
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
tm_num 1;
51159 50686 transmembrane_helix
ID metaerg.pl|10888
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
topology i50941-51009o;
51354 51265 tRNA
ID metaerg.pl|10889
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
name tRNA_Pro_cgg;
51379 51651 CDS
ID metaerg.pl|10890
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
51999 52439 CDS
ID metaerg.pl|10891
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666160.1 1 113 evalue:1.8e-36 qcov:77.40 identity:65.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
52436 53800 CDS
ID metaerg.pl|10892
allec_ids 5.4.2.8;
allgo_ids GO:0005975; GO:0016868; GO:0000287; GO:0004615; GO:0009298; GO:0009243;
allko_ids K01840; K01835; K03431; K00966;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442140.1 9 453 evalue:1.4e-177 qcov:98.00 identity:72.70;
kegg_pathway_id 00030; 00051; 00010; 00052; 00521; 00530; 00500;
kegg_pathway_name Pentose phosphate pathway; Fructose and mannose metabolism; Glycolysis / Gluconeogenesis; Galactose metabolism; Streptomycin biosynthesis; Aminosugars metabolism; Starch and sucrose metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-5659; COLANSYN-PWY; PWY-882;
metacyc_pathway_name GDP-mannose biosynthesis;; colanic acid building blocks biosynthesis;; L-ascorbate biosynthesis I (L-galactose pathway);;
metacyc_pathway_type GDP-Sugar-Biosynthesis;; Carbohydrates-Biosynthesis; Super-Pathways;; Ascorbate-Biosynthesis;;
pfam_acc PF02878; PF02879; PF02880; PF00408;
pfam_desc Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain;
pfam_id PGM_PMM_I; PGM_PMM_II; PGM_PMM_III; PGM_PMM_IV;
pfam_target db:Pfam-A.hmm|PF02878.16 evalue:2e-31 score:107.8 best_domain_score:106.9 name:PGM_PMM_I; db:Pfam-A.hmm|PF02879.16 evalue:2.8e-21 score:75.3 best_domain_score:71.5 name:PGM_PMM_II; db:Pfam-A.hmm|PF02880.16 evalue:1.6e-22 score:79.1 best_domain_score:78.1 name:PGM_PMM_III; db:Pfam-A.hmm|PF00408.20 evalue:9.1e-17 score:60.3 best_domain_score:57.4 name:PGM_PMM_IV;
sprot_desc Phosphomannomutase;
sprot_id sp|Q01411|MANB_SALMO;
sprot_target db:uniprot_sprot|sp|Q01411|MANB_SALMO 14 448 evalue:2.7e-74 qcov:95.80 identity:40.60;
54295 54885 CDS
ID metaerg.pl|10893
allgo_ids GO:0009116;
allko_ids K00762;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666163.1 3 191 evalue:2.4e-44 qcov:96.40 identity:57.40;
kegg_pathway_id 00240; 00983;
kegg_pathway_name Pyrimidine metabolism; Drug metabolism - other enzymes;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:2.8e-08 score:32.7 best_domain_score:32.1 name:Pribosyltran;
55198 55557 CDS
ID metaerg.pl|10894
allgo_ids GO:0044238; GO:0005737; GO:0006417;
allko_ids K05808;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666164.1 1 106 evalue:6.2e-40 qcov:89.10 identity:84.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF02482;
pfam_desc Sigma 54 modulation protein / S30EA ribosomal protein;
pfam_id Ribosomal_S30AE;
pfam_target db:Pfam-A.hmm|PF02482.19 evalue:2.7e-18 score:65.8 best_domain_score:65.5 name:Ribosomal_S30AE;
sprot_desc Ribosome hibernation promotion factor;
sprot_id sp|A2RIX0|HPF_LACLM;
sprot_target db:uniprot_sprot|sp|A2RIX0|HPF_LACLM 1 108 evalue:9.8e-08 qcov:90.80 identity:32.40;
tigrfam_acc TIGR00741;
tigrfam_desc ribosomal subunit interface protein;
tigrfam_mainrole Protein synthesis;
tigrfam_name yfiA;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00741 evalue:2.1e-21 score:75.5 best_domain_score:75.2 name:TIGR00741;
55816 56484 CDS
ID metaerg.pl|10895
allgo_ids GO:0006355; GO:0005737; GO:0003677; GO:0000160;
allko_ids K02482; K02480; K07653; K07636; K11527; K10715; K07678; K02668; K03388; K07674; K08479; K10916; K02489; K07716; K07710; K12767; K02486; K11383; K11617; K04757; K10125; K11357; K07647; K07675; K07717; K01769; K06379; K07676; K10681; K07709; K07644; K07778; K07768; K02575; K07711; K07679; K02478; K07648; K07651; K07718; K07654; K07682; K03407; K07641; K07646; K07639; K01120; K07673; K07652; K07677; K07708; K10909; K07704; K01937; K08282; K11231; K11711; K07642; K02484; K11356; K11640; K07692;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666165.1 6 222 evalue:7.6e-100 qcov:97.70 identity:88.90;
kegg_pathway_id 05111; 00790; 00230; 00240; 02020; 04011; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Folate biosynthesis; Purine metabolism; Pyrimidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00196; PF13384; PF00072; PF08281;
pfam_desc Bacterial regulatory proteins, luxR family; Homeodomain-like domain; Response regulator receiver domain; Sigma-70, region 4;
pfam_id GerE; HTH_23; Response_reg; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:3.6e-24 score:83.3 best_domain_score:82.8 name:GerE; db:Pfam-A.hmm|PF13384.6 evalue:7.5e-06 score:24.8 best_domain_score:22.1 name:HTH_23; db:Pfam-A.hmm|PF00072.24 evalue:1.6e-32 score:111.2 best_domain_score:110.3 name:Response_reg; db:Pfam-A.hmm|PF08281.12 evalue:5e-07 score:28.5 best_domain_score:27.7 name:Sigma70_r4_2;
sprot_desc Transcriptional regulatory protein DegU;
sprot_id sp|P13800|DEGU_BACSU;
sprot_target db:uniprot_sprot|sp|P13800|DEGU_BACSU 6 221 evalue:3.9e-42 qcov:97.30 identity:41.80;
56769 59753 CDS
ID metaerg.pl|10896
allgo_ids GO:0005524; GO:0016020; GO:0017038; GO:0005737; GO:0005886; GO:0046872; GO:0065002; GO:0006605;
allko_ids K03070;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666166.1 1 994 evalue:0.0e+00 qcov:100.00 identity:74.90;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF02810; PF07517; PF01043; PF07516;
pfam_desc SEC-C motif; SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain;
pfam_id SEC-C; SecA_DEAD; SecA_PP_bind; SecA_SW;
pfam_target db:Pfam-A.hmm|PF02810.15 evalue:2.6e-10 score:39.2 best_domain_score:38.3 name:SEC-C; db:Pfam-A.hmm|PF07517.14 evalue:4.2e-125 score:416.1 best_domain_score:415.3 name:SecA_DEAD; db:Pfam-A.hmm|PF01043.20 evalue:2.9e-37 score:126.9 best_domain_score:125.6 name:SecA_PP_bind; db:Pfam-A.hmm|PF07516.13 evalue:4.4e-68 score:228.5 best_domain_score:227.2 name:SecA_SW;
sprot_desc hypothetical protein;
sprot_id sp|Q2JEZ1|SECA_FRACC;
sprot_target db:uniprot_sprot|sp|Q2JEZ1|SECA_FRACC 3 993 evalue:4.7e-289 qcov:99.70 identity:59.40;
tigrfam_acc TIGR00963;
tigrfam_desc preprotein translocase, SecA subunit;
tigrfam_mainrole Protein fate;
tigrfam_name secA;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00963 evalue:0 score:1096.2 best_domain_score:1096.0 name:TIGR00963;
60375 59773 CDS
ID metaerg.pl|10897
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666167.1 12 180 evalue:5.0e-26 qcov:84.50 identity:48.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
61478 60372 CDS
ID metaerg.pl|10898
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
tm_num 1;
61478 60372 transmembrane_helix
ID metaerg.pl|10899
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
topology i60432-60500o;
61745 62398 CDS
ID metaerg.pl|10900
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0003677; GO:0016987;
allko_ids K03088;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441434.1 8 212 evalue:2.8e-86 qcov:94.50 identity:78.50;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF04542; PF04545; PF08281;
pfam_desc Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF04542.14 evalue:9.4e-17 score:59.8 best_domain_score:59.8 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:6.6e-09 score:34.4 best_domain_score:33.1 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:4.5e-16 score:57.5 best_domain_score:56.6 name:Sigma70_r4_2;
sprot_desc ECF RNA polymerase sigma factor SigH;
sprot_id sp|A0QTP2|SIGH_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QTP2|SIGH_MYCS2 18 217 evalue:4.5e-59 qcov:92.20 identity:59.80;
tigrfam_acc TIGR02937; TIGR02947;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, TIGR02947 family;
tigrfam_name sigma70-ECF; SigH_actino;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:1.5e-27 score:95.4 best_domain_score:95.1 name:TIGR02937; db:TIGRFAMs.hmm|TIGR02947 evalue:2e-79 score:264.9 best_domain_score:264.5 name:TIGR02947;
62395 62649 CDS
ID metaerg.pl|10901
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666169.1 5 78 evalue:1.0e-20 qcov:88.10 identity:66.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF13490;
pfam_desc Putative zinc-finger;
pfam_id zf-HC2;
pfam_target db:Pfam-A.hmm|PF13490.6 evalue:8.2e-10 score:38.0 best_domain_score:38.0 name:zf-HC2;
tigrfam_acc TIGR02949; TIGR03988;
tigrfam_desc anti-sigma factor, TIGR02949 family; mycothiol system anti-sigma-R factor;
tigrfam_mainrole Transcription; Transcription;
tigrfam_name anti_SigH_actin; antisig_RsrA;
tigrfam_sub1role Transcription factors; Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR02949 evalue:1.5e-19 score:69.0 best_domain_score:68.9 name:TIGR02949; db:TIGRFAMs.hmm|TIGR03988 evalue:1.7e-19 score:68.8 best_domain_score:68.6 name:TIGR03988;
62804 63760 CDS
ID metaerg.pl|10902
allec_ids 5.1.3.2;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0003978; GO:0006012;
allko_ids K00356; K01711; K01784; K03953; K00329;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666170.1 1 315 evalue:3.4e-133 qcov:99.10 identity:76.50;
kegg_pathway_id 00520; 00051; 00052; 00190; 00130; 05012;
kegg_pathway_name Nucleotide sugars metabolism; Fructose and mannose metabolism; Galactose metabolism; Oxidative phosphorylation; Ubiquinone biosynthesis; Parkinson's disease;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-6397; PWY-3821; COLANSYN-PWY; PWY-6317; PWY-5114; PWY-6404;
metacyc_pathway_name mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; D-galactose detoxification;; colanic acid building blocks biosynthesis;; D-galactose degradation I (Leloir pathway);; UDP-sugars interconversion;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Cell-Wall-Biosynthesis;; Detoxification;; Carbohydrates-Biosynthesis; Super-Pathways;; GALACTOSE-DEGRADATION;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF01073; PF01370; PF16363; PF13460; PF07993; PF02719; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; NAD(P)H-binding ; Male sterility protein; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; NAD_binding_10; NAD_binding_4; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:8.9e-18 score:63.5 best_domain_score:61.7 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:1.6e-58 score:197.2 best_domain_score:197.0 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:2e-57 score:194.3 best_domain_score:191.6 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF13460.6 evalue:5.1e-09 score:35.5 best_domain_score:32.5 name:NAD_binding_10; db:Pfam-A.hmm|PF07993.12 evalue:8.9e-11 score:40.7 best_domain_score:25.3 name:NAD_binding_4; db:Pfam-A.hmm|PF02719.15 evalue:1.2e-13 score:50.1 best_domain_score:40.8 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:7.1e-09 score:34.4 best_domain_score:33.8 name:RmlD_sub_bind;
sprot_desc UDP-glucose 4-epimerase;
sprot_id sp|P9WN66|GALE_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WN66|GALE_MYCTO 7 313 evalue:1.6e-73 qcov:96.50 identity:51.00;
63945 64415 CDS
ID metaerg.pl|10903
allgo_ids GO:0043565;
allko_ids K00820;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669579.1 2 156 evalue:1.4e-47 qcov:99.40 identity:65.20;
kegg_pathway_id 00251; 00530;
kegg_pathway_name Glutamate metabolism; Aminosugars metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF01381; PF13560;
pfam_desc Helix-turn-helix; Helix-turn-helix domain;
pfam_id HTH_3; HTH_31;
pfam_target db:Pfam-A.hmm|PF01381.22 evalue:1.9e-07 score:30.3 best_domain_score:29.6 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:2.2e-06 score:27.2 best_domain_score:25.9 name:HTH_31;
65285 64476 CDS
ID metaerg.pl|10904
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666171.1 30 264 evalue:8.3e-32 qcov:87.40 identity:40.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
65618 65851 CDS
ID metaerg.pl|10905
allgo_ids GO:0003700; GO:0006352; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666175.1 1 77 evalue:1.1e-26 qcov:100.00 identity:80.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF04545;
pfam_desc Sigma-70, region 4;
pfam_id Sigma70_r4;
pfam_target db:Pfam-A.hmm|PF04545.16 evalue:3.8e-12 score:44.8 best_domain_score:44.4 name:Sigma70_r4;
65861 67303 CDS
ID metaerg.pl|10906
allec_ids 2.7.13.3;
allgo_ids GO:0004673; GO:0005524; GO:0000160;
allko_ids K04757; K06379; K01769; K07636; K07653; K02480; K08801; K02668; K01768; K08282; K07642; K02484; K07654; K07641; K00936;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666176.1 1 480 evalue:6.7e-218 qcov:100.00 identity:84.00;
kegg_pathway_id 02020; 03090; 00230;
kegg_pathway_name Two-component system - General; Type II secretion system; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF02518; PF13581; PF07568; PF07536; PF12282;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase-like ATPase domain; Histidine kinase; HWE histidine kinase; Signal transduction histidine kinase;
pfam_id HATPase_c; HATPase_c_2; HisKA_2; HWE_HK; H_kinase_N;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.9e-08 score:34.0 best_domain_score:30.9 name:HATPase_c; db:Pfam-A.hmm|PF13581.6 evalue:3.3e-07 score:29.5 best_domain_score:27.3 name:HATPase_c_2; db:Pfam-A.hmm|PF07568.12 evalue:4.3e-24 score:83.6 best_domain_score:82.6 name:HisKA_2; db:Pfam-A.hmm|PF07536.14 evalue:8.1e-08 score:32.1 best_domain_score:31.9 name:HWE_HK; db:Pfam-A.hmm|PF12282.8 evalue:9.7e-54 score:180.4 best_domain_score:171.9 name:H_kinase_N;
sprot_desc Probable sensor histidine kinase pdtaS;
sprot_id sp|P9WGL4|PDTAS_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WGL4|PDTAS_MYCTO 1 480 evalue:1.7e-90 qcov:100.00 identity:43.10;
67661 67410 CDS
ID metaerg.pl|10907
allgo_ids GO:0005737; GO:0051539; GO:0035731; GO:0003677; GO:0046872; GO:0006355;
allko_ids K18955;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666178.1 1 83 evalue:1.3e-36 qcov:100.00 identity:90.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF02467;
pfam_desc Transcription factor WhiB;
pfam_id Whib;
pfam_target db:Pfam-A.hmm|PF02467.16 evalue:2.2e-26 score:91.4 best_domain_score:91.1 name:Whib;
sprot_desc Transcriptional regulator WhiB1;
sprot_id sp|Q8G5J9|WHIB1_BIFLO;
sprot_target db:uniprot_sprot|sp|Q8G5J9|WHIB1_BIFLO 2 80 evalue:2.0e-23 qcov:95.20 identity:64.60;
68993 68085 CDS
ID metaerg.pl|10908
allgo_ids GO:0016301;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441435.1 1 301 evalue:5.0e-118 qcov:99.70 identity:73.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00781;
pfam_desc Diacylglycerol kinase catalytic domain;
pfam_id DAGK_cat;
pfam_target db:Pfam-A.hmm|PF00781.24 evalue:2.8e-23 score:81.1 best_domain_score:80.2 name:DAGK_cat;
71394 69034 CDS
ID metaerg.pl|10909
allec_ids 2.4.1.129; 3.4.16.4;
allgo_ids GO:0008658; GO:0016021; GO:0005886; GO:0008955; GO:0009002; GO:0071555; GO:0009252; GO:0008360; GO:0046677;
allko_ids K05367; K08884; K05366; K08282; K04478; K12555; K03587; K05364; K08384; K05365; K12556;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666180.1 16 751 evalue:2.4e-225 qcov:93.60 identity:59.10;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-6470; PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-5265; PWY-6385;
metacyc_pathway_name peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis III (mycobacteria);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00912; PF00905;
pfam_desc Transglycosylase; Penicillin binding protein transpeptidase domain;
pfam_id Transgly; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF00912.22 evalue:1.6e-58 score:196.3 best_domain_score:195.8 name:Transgly; db:Pfam-A.hmm|PF00905.22 evalue:1.2e-34 score:119.1 best_domain_score:117.6 name:Transpeptidase;
sp YES;
sprot_desc Penicillin-binding protein 1A;
sprot_id sp|O87626|PBPA_NEIFL;
sprot_target db:uniprot_sprot|sp|O87626|PBPA_NEIFL 18 618 evalue:1.1e-62 qcov:76.50 identity:29.40;
tm_num 1;
69034 69114 lipoprotein_signal_peptide
ID metaerg.pl|10910
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
71394 69034 transmembrane_helix
ID metaerg.pl|10911
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
topology i69067-69135o;
72615 71479 CDS
ID metaerg.pl|10912
allec_ids 2.5.1.48;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0003962; GO:0009086;
allko_ids K01760; K01739;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666181.1 6 377 evalue:2.4e-170 qcov:98.40 identity:82.00;
kegg_pathway_id 00272; 00450; 00910; 00920; 00271;
kegg_pathway_name Cysteine metabolism; Selenoamino acid metabolism; Nitrogen metabolism; Sulfur metabolism; Methionine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY0-781; MET-SAM-PWY; METSYN-PWY; HOMOSER-METSYN-PWY; P4-PWY; PWY-5347;
metacyc_pathway_name aspartate superpathway;; superpathway of S-adenosyl-L-methionine biosynthesis;; superpathway of L-homoserine and L-methionine biosynthesis;; L-methionine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-methionine biosynthesis (transsulfuration);;
metacyc_pathway_type Super-Pathways;; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00155; PF00266; PF01053;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Cys/Met metabolism PLP-dependent enzyme;
pfam_id Aminotran_1_2; Aminotran_5; Cys_Met_Meta_PP;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:9.8e-11 score:40.6 best_domain_score:40.1 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:2.1e-06 score:26.2 best_domain_score:25.6 name:Aminotran_5; db:Pfam-A.hmm|PF01053.20 evalue:2.5e-141 score:469.9 best_domain_score:469.7 name:Cys_Met_Meta_PP;
sprot_desc Cystathionine gamma-synthase;
sprot_id sp|P66876|METB_MYCBO;
sprot_target db:uniprot_sprot|sp|P66876|METB_MYCBO 6 378 evalue:4.5e-123 qcov:98.70 identity:62.00;
74096 72612 CDS
ID metaerg.pl|10913
allec_ids 4.2.1.22;
allgo_ids GO:0005737; GO:0004122; GO:0019343;
allko_ids K10150; K01738; K12339; K01733; K01697; K01754; K13034;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669580.1 45 492 evalue:1.5e-204 qcov:90.70 identity:79.30;
kegg_pathway_id 00450; 00920; 00271; 00750; 00290; 00260; 00272;
kegg_pathway_name Selenoamino acid metabolism; Sulfur metabolism; Methionine metabolism; Vitamin B6 metabolism; Valine, leucine and isoleucine biosynthesis; Glycine, serine and threonine metabolism; Cysteine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-801; PWY-5328; HOMOCYSDEGR-PWY; PWY-6293; PWY-6292; PWY-821;
metacyc_pathway_name homocysteine and cysteine interconversion;; superpathway of L-methionine salvage and degradation;; L-cysteine biosynthesis III (from L-homocysteine);; superpathway of L-cysteine biosynthesis (fungi);; superpathway of L-cysteine biosynthesis (mammalian);; superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae);;
metacyc_pathway_type CYSTEINE-SYN; Interconversion;; METHIONINE-DEG; Super-Pathways;; CYSTEINE-SYN; HOMOCYSTEINE-DEG;; CYSTEINE-SYN; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00571; PF00291;
pfam_desc CBS domain; Pyridoxal-phosphate dependent enzyme;
pfam_id CBS; PALP;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:1.3e-11 score:44.0 best_domain_score:21.4 name:CBS; db:Pfam-A.hmm|PF00291.25 evalue:2.6e-68 score:229.8 best_domain_score:227.8 name:PALP;
sprot_desc Putative cystathionine beta-synthase MT1108;
sprot_id sp|P9WP50|Y1077_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WP50|Y1077_MYCTO 37 494 evalue:8.4e-130 qcov:92.70 identity:53.80;
tigrfam_acc TIGR01137;
tigrfam_desc cystathionine beta-synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name cysta_beta;
tigrfam_sub1role Serine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01137 evalue:5.3e-161 score:535.5 best_domain_score:535.3 name:TIGR01137;
74326 74254 tRNA
ID metaerg.pl|10914
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
name tRNA_Arg_ccg;
74589 74975 CDS
ID metaerg.pl|10915
allec_ids 2.7.7.65;
allgo_ids GO:0000160; GO:0005737; GO:0052621; GO:0005525; GO:0042802; GO:0046872; GO:0007049; GO:0030154;
allko_ids K11527; K10715; K07678; K02482; K02480; K07638; K07653; K07636; K02489; K07716; K07710; K01768; K02668; K03388; K08479; K10916; K07647; K07675; K07717; K12767; K02486; K13761; K11383; K04757; K10125; K11357; K07709; K07644; K07650; K06379; K10681; K07676; K07679; K02478; K07648; K07651; K07718; K07778; K11354; K07768; K00873; K07711; K07641; K07646; K07639; K08475; K07673; K01120; K07652; K07654; K07682; K03407; K07637; K11231; K02491; K13490; K07708; K07645; K07677; K10909; K07704; K08282; K00760; K02484; K11356; K11640; K11711; K07642; K02488;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666186.1 1 122 evalue:8.8e-32 qcov:95.30 identity:62.10;
kegg_pathway_id 00230; 05111; 00010; 00710; 00983; 00790; 04011; 02020; 03090; 00620;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Drug metabolism - other enzymes; Folate biosynthesis; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:4.8e-28 score:96.8 best_domain_score:96.7 name:Response_reg;
sprot_desc Response regulator PleD;
sprot_id sp|Q9A5I5|PLED_CAUVC;
sprot_target db:uniprot_sprot|sp|Q9A5I5|PLED_CAUVC 3 118 evalue:4.6e-19 qcov:90.60 identity:44.80;
75123 76940 CDS
ID metaerg.pl|10916
allec_ids 6.1.1.19;
allgo_ids GO:0000166; GO:0004814; GO:0005524; GO:0005737; GO:0006420;
allko_ids K01887;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442142.1 8 605 evalue:1.3e-247 qcov:98.80 identity:73.60;
kegg_pathway_id 00330; 00970;
kegg_pathway_name Arginine and proline metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03485; PF05746; PF00750;
pfam_desc Arginyl tRNA synthetase N terminal domain; DALR anticodon binding domain; tRNA synthetases class I (R);
pfam_id Arg_tRNA_synt_N; DALR_1; tRNA-synt_1d;
pfam_target db:Pfam-A.hmm|PF03485.16 evalue:1.1e-23 score:82.9 best_domain_score:81.5 name:Arg_tRNA_synt_N; db:Pfam-A.hmm|PF05746.15 evalue:5.2e-29 score:100.1 best_domain_score:98.9 name:DALR_1; db:Pfam-A.hmm|PF00750.19 evalue:6e-16 score:57.5 best_domain_score:28.2 name:tRNA-synt_1d;
sprot_desc Arginine--tRNA ligase;
sprot_id sp|A8L3U5|SYR_FRASN;
sprot_target db:uniprot_sprot|sp|A8L3U5|SYR_FRASN 1 605 evalue:2.2e-127 qcov:100.00 identity:44.70;
tigrfam_acc TIGR00456;
tigrfam_desc arginine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name argS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00456 evalue:1.3e-104 score:349.7 best_domain_score:209.5 name:TIGR00456;
76982 78289 CDS
ID metaerg.pl|10917
allec_ids 4.1.1.20;
allgo_ids GO:0003824; GO:0008836; GO:0030170; GO:0009089;
allko_ids K01586; K12526; K01581;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666188.1 5 435 evalue:8.0e-210 qcov:99.10 identity:82.80;
kegg_pathway_id 00300; 00480; 00220;
kegg_pathway_name Lysine biosynthesis; Glutathione metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
metacyc_pathway_id PWY-2941; P4-PWY; PWY-5097; PWY0-781; PWY-724; DAPLYSINESYN-PWY;
metacyc_pathway_name L-lysine biosynthesis II;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; L-lysine biosynthesis VI;; aspartate superpathway;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-lysine biosynthesis I;;
metacyc_pathway_type LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;;
pfam_acc PF02784; PF00278;
pfam_desc Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Pyridoxal-dependent decarboxylase, C-terminal sheet domain;
pfam_id Orn_Arg_deC_N; Orn_DAP_Arg_deC;
pfam_target db:Pfam-A.hmm|PF02784.16 evalue:8.6e-65 score:217.8 best_domain_score:217.5 name:Orn_Arg_deC_N; db:Pfam-A.hmm|PF00278.22 evalue:2.8e-17 score:62.0 best_domain_score:60.8 name:Orn_DAP_Arg_deC;
sprot_desc Diaminopimelate decarboxylase;
sprot_id sp|Q8RQM6|DCDA_COREF;
sprot_target db:uniprot_sprot|sp|Q8RQM6|DCDA_COREF 7 432 evalue:3.4e-106 qcov:97.90 identity:46.40;
tigrfam_acc TIGR01048;
tigrfam_desc diaminopimelate decarboxylase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name lysA;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01048 evalue:1.8e-138 score:460.7 best_domain_score:460.4 name:TIGR01048;
78286 79206 CDS
ID metaerg.pl|10918
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666190.1 21 303 evalue:1.7e-89 qcov:92.50 identity:60.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00583; PF13673; PF13508;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:4.9e-09 score:35.7 best_domain_score:34.6 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:5.7e-10 score:38.4 best_domain_score:37.9 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:1.2e-08 score:34.5 best_domain_score:33.7 name:Acetyltransf_7;
79364 80341 CDS
ID metaerg.pl|10919
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114;
allko_ids K01711; K00356; K00329; K03953;
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__UBA8416;f__YA12-FULL-60-10;g__YA12-FULL-60-10;s__YA12-FULL-60-10 sp001803315;
genomedb_acc GCA_001803315.1;
genomedb_target db:genomedb|GCA_001803315.1|OGV65883.1 2 325 evalue:6.8e-81 qcov:99.70 identity:50.90;
kegg_pathway_id 00051; 00190; 05012; 00130;
kegg_pathway_name Fructose and mannose metabolism; Oxidative phosphorylation; Parkinson's disease; Ubiquinone biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF01073; PF01370; PF16363; PF13460; PF07993; PF05368; PF02719; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; NAD(P)H-binding ; Male sterility protein; NmrA-like family; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; NAD_binding_10; NAD_binding_4; NmrA; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:1.4e-12 score:46.5 best_domain_score:45.8 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:1.2e-29 score:102.8 best_domain_score:102.1 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:3.4e-14 score:52.2 best_domain_score:51.7 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF13460.6 evalue:4.8e-21 score:74.7 best_domain_score:74.4 name:NAD_binding_10; db:Pfam-A.hmm|PF07993.12 evalue:4.2e-07 score:28.6 best_domain_score:19.7 name:NAD_binding_4; db:Pfam-A.hmm|PF05368.13 evalue:1.3e-13 score:50.2 best_domain_score:49.9 name:NmrA; db:Pfam-A.hmm|PF02719.15 evalue:3.7e-05 score:22.2 best_domain_score:17.7 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:1.7e-10 score:39.7 best_domain_score:39.0 name:RmlD_sub_bind;
80460 81383 CDS
ID metaerg.pl|10920
allec_ids 3.4.11.18;
allgo_ids GO:0005737; GO:0005829; GO:0046872; GO:0070006; GO:0031365; GO:0070084; GO:0016485;
allko_ids K01265;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__Bog-473;s__Bog-473 sp003160635;
genomedb_acc GCA_003160635.1;
genomedb_target db:genomedb|GCA_003160635.1|PMLV01000328.1_29 5 305 evalue:8.9e-115 qcov:98.00 identity:66.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.641; 0.161151; 0.255364; 27.1199; 0.104609;
pfam_acc PF00557; PF02810;
pfam_desc Metallopeptidase family M24; SEC-C motif;
pfam_id Peptidase_M24; SEC-C;
pfam_target db:Pfam-A.hmm|PF00557.24 evalue:1.2e-57 score:194.3 best_domain_score:194.0 name:Peptidase_M24; db:Pfam-A.hmm|PF02810.15 evalue:1.5e-09 score:36.8 best_domain_score:35.9 name:SEC-C;
sprot_desc Methionine aminopeptidase 1A;
sprot_id sp|Q9SLN5|MAP1A_ARATH;
sprot_target db:uniprot_sprot|sp|Q9SLN5|MAP1A_ARATH 67 305 evalue:9.4e-79 qcov:77.90 identity:61.10;
tigrfam_acc TIGR00500;
tigrfam_desc methionine aminopeptidase, type I;
tigrfam_mainrole Protein fate;
tigrfam_name met_pdase_I;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00500 evalue:1.4e-88 score:295.8 best_domain_score:295.5 name:TIGR00500;
>Feature NODE_81_length_81418_cov_23.9822
623 201 CDS
ID metaerg.pl|10921
allec_ids 2.7.4.6;
allgo_ids GO:0005737; GO:0005524; GO:0046872; GO:0004550; GO:0006241; GO:0006183; GO:0006228;
allko_ids K00940;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_007204997.1 1 140 evalue:6.8e-70 qcov:100.00 identity:98.60;
kegg_pathway_id 00230; 00240;
kegg_pathway_name Purine metabolism; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY0-162; PWY-6125; PPGPPMET-PWY; PWY-6126; PWY0-163; PWY-5687; PWY0-166; PWY-6545; PRPP-PWY;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; superpathway of guanosine nucleotides de novo biosynthesis II;; ppGpp biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;; ; ; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);; pyrimidine deoxyribonucleotides de novo biosynthesis III;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Metabolic-Regulators;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; ; ; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;; Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;; Super-Pathways;;
pfam_acc PF00334;
pfam_desc Nucleoside diphosphate kinase;
pfam_id NDK;
pfam_target db:Pfam-A.hmm|PF00334.19 evalue:5.3e-53 score:177.9 best_domain_score:177.7 name:NDK;
sprot_desc Nucleoside diphosphate kinase;
sprot_id sp|Q28RC3|NDK_JANSC;
sprot_target db:uniprot_sprot|sp|Q28RC3|NDK_JANSC 1 140 evalue:2.4e-69 qcov:100.00 identity:95.00;
760 2613 CDS
ID metaerg.pl|10922
allgo_ids GO:0005524; GO:0016887;
allko_ids K06861; K02071; K01996; K02045; K02006; K02052; K02010; K05847; K01997; K02023; K01990; K01998; K02031; K02049; K01995; K09687; K02013; K06158;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953747.1 1 617 evalue:0.0e+00 qcov:100.00 identity:96.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF13304; PF00005; PF12848; PF01926;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; ABC transporter; 50S ribosome-binding GTPase;
pfam_id AAA_21; ABC_tran; ABC_tran_Xtn; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.9e-15 score:56.7 best_domain_score:27.6 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.9e-46 score:156.6 best_domain_score:84.5 name:ABC_tran; db:Pfam-A.hmm|PF12848.7 evalue:1.6e-25 score:88.2 best_domain_score:88.2 name:ABC_tran_Xtn; db:Pfam-A.hmm|PF01926.23 evalue:2.7e-05 score:23.5 best_domain_score:11.0 name:MMR_HSR1;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YheS;
sprot_id sp|P63390|YHES_ECO57;
sprot_target db:uniprot_sprot|sp|P63390|YHES_ECO57 14 521 evalue:1.4e-113 qcov:82.30 identity:44.00;
2666 3295 CDS
ID metaerg.pl|10923
allgo_ids GO:0016021; GO:0005886;
allko_ids K05595;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_007204999.1 1 209 evalue:1.0e-90 qcov:100.00 identity:87.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF01914;
pfam_desc MarC family integral membrane protein;
pfam_id MarC;
pfam_target db:Pfam-A.hmm|PF01914.17 evalue:3.2e-62 score:208.8 best_domain_score:208.5 name:MarC;
sprot_desc hypothetical protein;
sprot_id sp|Q59071|Y1677_METJA;
sprot_target db:uniprot_sprot|sp|Q59071|Y1677_METJA 3 204 evalue:8.8e-28 qcov:96.70 identity:39.00;
tigrfam_acc TIGR00427;
tigrfam_desc membrane protein, MarC family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00427;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00427 evalue:3.1e-58 score:196.0 best_domain_score:195.8 name:TIGR00427;
tm_num 6;
2666 3295 transmembrane_helix
ID metaerg.pl|10924
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology o2678-2746i2807-2875o2885-2941i3011-3079o3107-3175i3194-3262o;
3331 3891 CDS
ID metaerg.pl|10925
allec_ids 3.4.23.-;
allgo_ids GO:0016021; GO:0005886; GO:0004190;
allko_ids K06985;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953749.1 1 186 evalue:1.3e-84 qcov:100.00 identity:85.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF13650; PF13975;
pfam_desc Aspartyl protease; gag-polyprotein putative aspartyl protease;
pfam_id Asp_protease_2; gag-asp_proteas;
pfam_target db:Pfam-A.hmm|PF13650.6 evalue:6.4e-20 score:70.8 best_domain_score:70.2 name:Asp_protease_2; db:Pfam-A.hmm|PF13975.6 evalue:8.9e-24 score:83.1 best_domain_score:82.3 name:gag-asp_proteas;
sprot_desc hypothetical protein;
sprot_id sp|Q9ZC99|Y867_RICPR;
sprot_target db:uniprot_sprot|sp|Q9ZC99|Y867_RICPR 22 184 evalue:4.3e-18 qcov:87.60 identity:31.00;
tigrfam_acc TIGR02281;
tigrfam_desc clan AA aspartic protease, TIGR02281 family;
tigrfam_mainrole Protein fate;
tigrfam_name clan_AA_DTGA;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02281 evalue:3.3e-33 score:113.6 best_domain_score:113.2 name:TIGR02281;
tm_num 2;
3331 3891 transmembrane_helix
ID metaerg.pl|10926
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology i3343-3396o3424-3480i;
4498 4037 CDS
ID metaerg.pl|10927
allgo_ids GO:0003677; GO:0003887; GO:0006260;
allko_ids K02339;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953751.1 1 149 evalue:7.9e-72 qcov:97.40 identity:87.90;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF04364;
pfam_desc DNA polymerase III chi subunit, HolC;
pfam_id DNA_pol3_chi;
pfam_target db:Pfam-A.hmm|PF04364.13 evalue:4.2e-28 score:97.4 best_domain_score:97.3 name:DNA_pol3_chi;
5968 4499 CDS
ID metaerg.pl|10928
allec_ids 3.4.11.1;
allgo_ids GO:0004177; GO:0005622; GO:0006508; GO:0005737; GO:0030145; GO:0008235;
allko_ids K01259; K01255; K11142;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953752.1 1 489 evalue:8.3e-240 qcov:100.00 identity:86.30;
kegg_pathway_id 00330; 00480;
kegg_pathway_name Arginine and proline metabolism; Glutathione metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id PWY-6018; PWY-5988;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF00883;
pfam_desc Cytosol aminopeptidase family, catalytic domain;
pfam_id Peptidase_M17;
pfam_target db:Pfam-A.hmm|PF00883.21 evalue:2.4e-116 score:387.6 best_domain_score:387.2 name:Peptidase_M17;
sprot_desc Probable cytosol aminopeptidase;
sprot_id sp|A4WRK9|AMPA_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WRK9|AMPA_RHOS5 1 488 evalue:1.8e-177 qcov:99.80 identity:64.50;
6106 7236 CDS
ID metaerg.pl|10929
allgo_ids GO:0016021;
allko_ids K11720; K07091;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953753.1 8 369 evalue:1.6e-169 qcov:96.30 identity:87.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF03739;
pfam_desc Lipopolysaccharide export system permease LptF/LptG;
pfam_id LptF_LptG;
pfam_target db:Pfam-A.hmm|PF03739.14 evalue:4.3e-59 score:199.4 best_domain_score:199.1 name:LptF_LptG;
tigrfam_acc TIGR04407;
tigrfam_desc LPS export ABC transporter permease LptF;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name LptF_YjgP;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04407 evalue:1e-74 score:250.5 best_domain_score:250.3 name:TIGR04407;
tm_num 6;
6106 7236 transmembrane_helix
ID metaerg.pl|10930
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology i6139-6207o6265-6333i6412-6471o6943-7011i7024-7092o7120-7188i;
7233 8327 CDS
ID metaerg.pl|10931
allgo_ids GO:0016021;
allko_ids K11720;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953754.1 1 364 evalue:1.0e-173 qcov:100.00 identity:90.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF03739;
pfam_desc Lipopolysaccharide export system permease LptF/LptG;
pfam_id LptF_LptG;
pfam_target db:Pfam-A.hmm|PF03739.14 evalue:1.3e-65 score:220.8 best_domain_score:220.5 name:LptF_LptG;
tigrfam_acc TIGR04408;
tigrfam_desc LPS export ABC transporter permease LptG;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name LptG_lptG;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04408 evalue:1.2e-98 score:329.2 best_domain_score:329.0 name:TIGR04408;
tm_num 6;
7233 8327 transmembrane_helix
ID metaerg.pl|10932
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology i7251-7319o7404-7472i7533-7601o8055-8123i8160-8228o8241-8309i;
8327 10423 CDS
ID metaerg.pl|10933
allgo_ids GO:0010033; GO:0019867; GO:0061024;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953755.1 1 698 evalue:0.0e+00 qcov:100.00 identity:80.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF04453;
pfam_desc LPS transport system D;
pfam_id LptD;
pfam_target db:Pfam-A.hmm|PF04453.14 evalue:9.3e-42 score:142.8 best_domain_score:136.8 name:LptD;
sp YES;
8327 8377 signal_peptide
ID metaerg.pl|10934
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
10441 11664 CDS
ID metaerg.pl|10935
allgo_ids GO:0003755;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953756.1 1 407 evalue:4.8e-193 qcov:100.00 identity:86.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00639; PF13145; PF13616; PF09312; PF13624;
pfam_desc PPIC-type PPIASE domain; PPIC-type PPIASE domain; PPIC-type PPIASE domain; SurA N-terminal domain; SurA N-terminal domain;
pfam_id Rotamase; Rotamase_2; Rotamase_3; SurA_N; SurA_N_3;
pfam_target db:Pfam-A.hmm|PF00639.21 evalue:3.4e-13 score:49.6 best_domain_score:45.9 name:Rotamase; db:Pfam-A.hmm|PF13145.6 evalue:4.1e-08 score:33.3 best_domain_score:24.0 name:Rotamase_2; db:Pfam-A.hmm|PF13616.6 evalue:8.6e-07 score:28.7 best_domain_score:27.5 name:Rotamase_3; db:Pfam-A.hmm|PF09312.11 evalue:3.4e-09 score:36.0 best_domain_score:33.3 name:SurA_N; db:Pfam-A.hmm|PF13624.6 evalue:1.3e-09 score:37.3 best_domain_score:34.7 name:SurA_N_3;
sp YES;
10441 10515 signal_peptide
ID metaerg.pl|10936
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
11661 12653 CDS
ID metaerg.pl|10937
allec_ids 1.1.1.262;
allgo_ids GO:0051287; GO:0055114; GO:0005737; GO:0050570; GO:0050897; GO:0000287; GO:0008270; GO:0042823; GO:0008615;
allko_ids K00097;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087207323.1 1 329 evalue:5.2e-161 qcov:99.70 identity:87.20;
kegg_pathway_id 00750;
kegg_pathway_name Vitamin B6 metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id PYRIDOXSYN-PWY; PWY0-845;
metacyc_pathway_name pyridoxal 5'-phosphate biosynthesis I;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;;
metacyc_pathway_type Vitamin-B6-Biosynthesis;; Super-Pathways; Vitamin-B6-Biosynthesis;;
pfam_acc PF04166;
pfam_desc Pyridoxal phosphate biosynthetic protein PdxA;
pfam_id PdxA;
pfam_target db:Pfam-A.hmm|PF04166.12 evalue:5.5e-100 score:333.6 best_domain_score:333.3 name:PdxA;
sprot_desc 4-hydroxythreonine-4-phosphate dehydrogenase;
sprot_id sp|Q164G2|PDXA_ROSDO;
sprot_target db:uniprot_sprot|sp|Q164G2|PDXA_ROSDO 3 314 evalue:8.8e-107 qcov:94.50 identity:63.60;
tigrfam_acc TIGR00557;
tigrfam_desc 4-hydroxythreonine-4-phosphate dehydrogenase PdxA;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name pdxA;
tigrfam_sub1role Pyridoxine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00557 evalue:1e-119 score:398.9 best_domain_score:398.6 name:TIGR00557;
12650 13495 CDS
ID metaerg.pl|10938
allec_ids 2.1.1.182;
allgo_ids GO:0005737; GO:0052908; GO:0003723; GO:0000179;
allko_ids K02528;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953758.1 1 281 evalue:1.4e-143 qcov:100.00 identity:92.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00398;
pfam_desc Ribosomal RNA adenine dimethylase;
pfam_id RrnaAD;
pfam_target db:Pfam-A.hmm|PF00398.20 evalue:8e-44 score:148.9 best_domain_score:148.7 name:RrnaAD;
sprot_desc Ribosomal RNA small subunit methyltransferase A;
sprot_id sp|Q1GI39|RSMA_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GI39|RSMA_RUEST 1 277 evalue:6.7e-124 qcov:98.60 identity:79.10;
tigrfam_acc TIGR00755;
tigrfam_desc ribosomal RNA small subunit methyltransferase A;
tigrfam_mainrole Protein synthesis;
tigrfam_name ksgA;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00755 evalue:2.4e-69 score:232.6 best_domain_score:232.5 name:TIGR00755;
14038 13502 CDS
ID metaerg.pl|10939
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_040482804.1 1 178 evalue:7.1e-64 qcov:100.00 identity:82.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF13763;
pfam_desc Domain of unknown function (DUF4167);
pfam_id DUF4167;
pfam_target db:Pfam-A.hmm|PF13763.6 evalue:4.4e-32 score:109.3 best_domain_score:109.3 name:DUF4167;
15084 14251 CDS
ID metaerg.pl|10940
allec_ids 2.1.1.297; 2.1.1.-;
allgo_ids GO:0008168; GO:0003676; GO:0102559; GO:0036009; GO:0018364;
allko_ids K02493;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087207330.1 1 277 evalue:2.4e-103 qcov:100.00 identity:72.60;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id PWY-5467; PWY-6477; CODH-PWY; PWY-6442; PWY-6575; PWY-4021; PWY-5041; PWY-6153; PWY-3542; ALL-CHORISMATE-PWY; PWY-1061; PWY-5876; PWY-5864; PWY-5975; PWY-5729; PWY-6113; PWY-5305; PWYG-321; PWY-1422; PWY-6151; PWY-5855; PWY-5209; PWY-6303; PWY-5857; METH-ACETATE-PWY; PWY-6154; UBISYN-PWY; PWY-6424; PWY-6142; PWY-5856; PWY-5116; PWY-1581; CO2FORM-PWY; PWY-6519; PWY-5773; PWY-5328; METHIONINE-DEG1-PWY; PWY-6427; PWY-6395; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-6292; PWY-5987; PWY-5479;
metacyc_pathway_name gramine biosynthesis;; gibberellin inactivation II (methylation);; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; autoinducer AI-2 biosynthesis I;; choline biosynthesis II;; superpathway of chorismate metabolism;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; vitamin E biosynthesis (tocopherols);; S-adenosyl-L-methionine cycle I;; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; methanogenesis from acetate;; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; xanthohumol biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;;
metacyc_pathway_type INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Autotrophic-CO2-Fixation;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Autoinducer-Biosynthesis;; Choline-Biosynthesis;; Super-Pathways;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Autoinducer-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; ; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; CYSTEINE-SYN; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;;
pfam_acc PF08241; PF13649; PF13847; PF07021; PF05175; PF06325; PF17827;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methionine biosynthesis protein MetW; Methyltransferase small domain; Ribosomal protein L11 methyltransferase (PrmA); PrmC N-terminal domain;
pfam_id Methyltransf_11; Methyltransf_25; Methyltransf_31; MetW; MTS; PrmA; PrmC_N;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:4.9e-05 score:23.1 best_domain_score:22.2 name:Methyltransf_11; db:Pfam-A.hmm|PF13649.6 evalue:2e-09 score:37.3 best_domain_score:36.2 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:5.5e-14 score:51.5 best_domain_score:51.0 name:Methyltransf_31; db:Pfam-A.hmm|PF07021.12 evalue:0.00013 score:20.8 best_domain_score:20.2 name:MetW; db:Pfam-A.hmm|PF05175.14 evalue:9.5e-16 score:57.0 best_domain_score:53.3 name:MTS; db:Pfam-A.hmm|PF06325.13 evalue:4.9e-07 score:28.7 best_domain_score:28.0 name:PrmA; db:Pfam-A.hmm|PF17827.1 evalue:9e-06 score:25.4 best_domain_score:13.7 name:PrmC_N;
sprot_desc Release factor glutamine methyltransferase;
sprot_id sp|Q3J2B7|PRMC_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J2B7|PRMC_RHOS4 20 269 evalue:9.1e-65 qcov:90.30 identity:52.40;
tigrfam_acc TIGR00536; TIGR03534;
tigrfam_desc methyltransferase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific;
tigrfam_mainrole Protein fate; Protein fate;
tigrfam_name hemK_fam; RF_mod_PrmC;
tigrfam_sub1role Protein modification and repair; Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00536 evalue:1.6e-53 score:180.8 best_domain_score:180.4 name:TIGR00536; db:TIGRFAMs.hmm|TIGR03534 evalue:1.7e-72 score:243.0 best_domain_score:242.8 name:TIGR03534;
16136 15081 CDS
ID metaerg.pl|10941
allgo_ids GO:0006415; GO:0005737; GO:0016149;
allko_ids K02835;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953762.1 1 349 evalue:5.0e-178 qcov:99.40 identity:95.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF03462; PF00472;
pfam_desc PCRF domain; RF-1 domain;
pfam_id PCRF; RF-1;
pfam_target db:Pfam-A.hmm|PF03462.18 evalue:3.7e-67 score:225.2 best_domain_score:224.7 name:PCRF; db:Pfam-A.hmm|PF00472.20 evalue:4.1e-37 score:125.9 best_domain_score:124.9 name:RF-1;
sprot_desc Peptide chain release factor 1;
sprot_id sp|Q5LQM7|RF1_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LQM7|RF1_RUEPO 1 349 evalue:2.1e-146 qcov:99.40 identity:74.80;
tigrfam_acc TIGR00019;
tigrfam_desc peptide chain release factor 1;
tigrfam_mainrole Protein synthesis;
tigrfam_name prfA;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00019 evalue:8.8e-143 score:474.7 best_domain_score:474.6 name:TIGR00019;
16592 16155 CDS
ID metaerg.pl|10942
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_110570897.1 1 143 evalue:4.7e-50 qcov:98.60 identity:73.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF07386;
pfam_desc Protein of unknown function (DUF1499);
pfam_id DUF1499;
pfam_target db:Pfam-A.hmm|PF07386.11 evalue:1.8e-09 score:37.4 best_domain_score:37.3 name:DUF1499;
sp YES;
16155 16220 signal_peptide
ID metaerg.pl|10943
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
17530 16589 CDS
ID metaerg.pl|10944
allec_ids 3.5.3.7; 3.5.3.11;
allgo_ids GO:0046872; GO:0047971; GO:0006527;
allko_ids K01480; K12255;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_026352186.1 1 313 evalue:6.8e-179 qcov:100.00 identity:97.10;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id ARGDEG-IV-PWY; PWY-6305; PWY0-823; ARG+POLYAMINE-SYN; POLYAMSYN-PWY; PWY-40;
metacyc_pathway_name L-arginine degradation VIII (arginine oxidase pathway);; putrescine biosynthesis IV;; L-arginine degradation III (arginine decarboxylase/agmatinase pathway);; superpathway of arginine and polyamine biosynthesis;; superpathway of polyamine biosynthesis I;; putrescine biosynthesis I;;
metacyc_pathway_type ARGININE-DEG;; Putrescine-Biosynthesis;; ARGININE-DEG;; Polyamine-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; Putrescine-Biosynthesis;;
pfam_acc PF00491;
pfam_desc Arginase family;
pfam_id Arginase;
pfam_target db:Pfam-A.hmm|PF00491.21 evalue:1.5e-84 score:283.1 best_domain_score:282.8 name:Arginase;
sprot_desc Guanidinobutyrase;
sprot_id sp|Q9I3S3|GBUA_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I3S3|GBUA_PSEAE 3 313 evalue:4.1e-114 qcov:99.40 identity:59.90;
tigrfam_acc TIGR01230;
tigrfam_desc agmatinase;
tigrfam_name agmatinase;
tigrfam_target db:TIGRFAMs.hmm|TIGR01230 evalue:1.6e-60 score:204.3 best_domain_score:204.0 name:TIGR01230;
18498 17530 CDS
ID metaerg.pl|10945
allec_ids 3.5.3.11;
allgo_ids GO:0046872; GO:0008783; GO:0030145; GO:0033388; GO:0008295;
allko_ids K01480;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953765.1 1 322 evalue:1.2e-178 qcov:100.00 identity:94.10;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id PWY-40; POLYAMSYN-PWY; ARG+POLYAMINE-SYN; PWY-6305; PWY0-823;
metacyc_pathway_name putrescine biosynthesis I;; superpathway of polyamine biosynthesis I;; superpathway of arginine and polyamine biosynthesis;; putrescine biosynthesis IV;; L-arginine degradation III (arginine decarboxylase/agmatinase pathway);;
metacyc_pathway_type Putrescine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; Putrescine-Biosynthesis;; ARGININE-DEG;;
pfam_acc PF00491;
pfam_desc Arginase family;
pfam_id Arginase;
pfam_target db:Pfam-A.hmm|PF00491.21 evalue:5.2e-82 score:274.7 best_domain_score:274.4 name:Arginase;
sprot_desc Agmatinase;
sprot_id sp|Q7P0S6|SPEB_CHRVO;
sprot_target db:uniprot_sprot|sp|Q7P0S6|SPEB_CHRVO 11 314 evalue:1.3e-83 qcov:94.40 identity:49.50;
tigrfam_acc TIGR01230;
tigrfam_desc agmatinase;
tigrfam_name agmatinase;
tigrfam_target db:TIGRFAMs.hmm|TIGR01230 evalue:2e-62 score:210.4 best_domain_score:210.1 name:TIGR01230;
19702 18542 CDS
ID metaerg.pl|10946
allec_ids 3.4.17.-;
allgo_ids GO:0016787; GO:0004180; GO:0046872; GO:0008237;
allko_ids K01451; K13048;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953766.1 1 385 evalue:1.2e-196 qcov:99.70 identity:88.10;
kegg_pathway_id 00360;
kegg_pathway_name Phenylalanine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:4.6e-11 score:41.9 best_domain_score:40.2 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:3.2e-35 score:121.0 best_domain_score:120.6 name:Peptidase_M20;
sprot_desc Thermostable carboxypeptidase 2;
sprot_id sp|P58156|CBPX2_SACS2;
sprot_target db:uniprot_sprot|sp|P58156|CBPX2_SACS2 1 360 evalue:1.4e-68 qcov:93.30 identity:38.90;
tigrfam_acc TIGR01891;
tigrfam_desc amidohydrolase;
tigrfam_mainrole Protein fate;
tigrfam_name amidohydrolases;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01891 evalue:2.4e-105 score:351.8 best_domain_score:351.6 name:TIGR01891;
19765 20595 CDS
ID metaerg.pl|10947
allec_ids 3.6.1.8; 3.6.1.31;
allgo_ids GO:0005524; GO:0047693; GO:0046872;
allko_ids K02428; K04765;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_007205017.1 1 270 evalue:7.4e-137 qcov:97.80 identity:90.00;
kegg_pathway_id 00230; 00240;
kegg_pathway_name Purine metabolism; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id PRPP-PWY; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; HISTIDINE-SYN;;
pfam_acc PF03819; PF01503;
pfam_desc MazG nucleotide pyrophosphohydrolase domain; Phosphoribosyl-ATP pyrophosphohydrolase;
pfam_id MazG; PRA-PH;
pfam_target db:Pfam-A.hmm|PF03819.17 evalue:1.6e-36 score:123.5 best_domain_score:86.8 name:MazG; db:Pfam-A.hmm|PF01503.17 evalue:2.2e-14 score:52.9 best_domain_score:36.4 name:PRA-PH;
sprot_desc Nucleoside triphosphate pyrophosphohydrolase;
sprot_id sp|P0AEY4|MAZG_ECO57;
sprot_target db:uniprot_sprot|sp|P0AEY4|MAZG_ECO57 16 269 evalue:6.3e-66 qcov:92.00 identity:51.60;
tigrfam_acc TIGR00444; TIGR03188;
tigrfam_desc MazG family protein; phosphoribosyl-ATP diphosphatase;
tigrfam_mainrole Unknown function; Amino acid biosynthesis;
tigrfam_name mazG; histidine_hisI;
tigrfam_sub1role General; Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00444 evalue:5.5e-89 score:297.2 best_domain_score:297.0 name:TIGR00444; db:TIGRFAMs.hmm|TIGR03188 evalue:8.9e-12 score:44.2 best_domain_score:27.5 name:TIGR03188;
20665 21669 CDS
ID metaerg.pl|10948
allgo_ids GO:0005886; GO:0042651; GO:0046872; GO:0006811; GO:0055072;
allko_ids K02012;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_051108176.1 1 334 evalue:2.2e-159 qcov:100.00 identity:83.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF01547; PF13531; PF13343; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_11; SBP_bac_6; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:3.4e-14 score:52.7 best_domain_score:51.8 name:SBP_bac_1; db:Pfam-A.hmm|PF13531.6 evalue:9.3e-13 score:47.7 best_domain_score:47.0 name:SBP_bac_11; db:Pfam-A.hmm|PF13343.6 evalue:9e-22 score:76.9 best_domain_score:76.5 name:SBP_bac_6; db:Pfam-A.hmm|PF13416.6 evalue:7.9e-16 score:57.9 best_domain_score:57.2 name:SBP_bac_8;
sp YES;
sprot_desc Iron uptake protein A1;
sprot_id sp|P72827|FUTA1_SYNY3;
sprot_target db:uniprot_sprot|sp|P72827|FUTA1_SYNY3 8 332 evalue:1.2e-71 qcov:97.30 identity:42.70;
20665 20727 signal_peptide
ID metaerg.pl|10949
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
23616 21808 CDS
ID metaerg.pl|10950
allec_ids 3.6.3.41;
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0003677; GO:0004832; GO:0006438;
allko_ids K01998; K02049; K01995; K09687; K02013; K02023; K01990; K02052; K02006; K02010; K09817; K01997; K02032; K02017; K06861; K01996; K02045; K15738;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953770.1 1 601 evalue:0.0e+00 qcov:99.80 identity:95.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00004; PF13304; PF13555; PF00005; PF16326; PF01926; PF02463;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain, putative AbiEii toxin, Type IV TA system; P-loop containing region of AAA domain; ABC transporter; ABC transporter C-terminal domain; 50S ribosome-binding GTPase; RecF/RecN/SMC N terminal domain;
pfam_id AAA; AAA_21; AAA_29; ABC_tran; ABC_tran_CTD; MMR_HSR1; SMC_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:6.2e-05 score:22.7 best_domain_score:15.4 name:AAA; db:Pfam-A.hmm|PF13304.6 evalue:7.9e-19 score:67.8 best_domain_score:21.1 name:AAA_21; db:Pfam-A.hmm|PF13555.6 evalue:2e-08 score:33.1 best_domain_score:18.5 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:4.6e-49 score:165.7 best_domain_score:86.3 name:ABC_tran; db:Pfam-A.hmm|PF16326.5 evalue:3.7e-15 score:55.2 best_domain_score:53.8 name:ABC_tran_CTD; db:Pfam-A.hmm|PF01926.23 evalue:5e-07 score:29.0 best_domain_score:13.7 name:MMR_HSR1; db:Pfam-A.hmm|PF02463.19 evalue:1.8e-12 score:46.4 best_domain_score:14.3 name:SMC_N;
sprot_desc Holdfast attachment protein C;
sprot_id sp|Q45978|HFAC_CAUVC;
sprot_target db:uniprot_sprot|sp|Q45978|HFAC_CAUVC 2 546 evalue:2.4e-134 qcov:90.50 identity:46.80;
tigrfam_acc TIGR01189;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:1.8e-43 score:147.7 best_domain_score:75.1 name:TIGR01189;
24386 23661 CDS
ID metaerg.pl|10951
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953771.1 1 237 evalue:3.7e-92 qcov:98.30 identity:72.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF13444;
pfam_desc Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_5;
pfam_target db:Pfam-A.hmm|PF13444.6 evalue:5.2e-16 score:58.4 best_domain_score:57.6 name:Acetyltransf_5;
24458 24850 CDS
ID metaerg.pl|10952
allec_ids 1.8.4.12; 1.8.4.-;
allgo_ids GO:0033743; GO:0055114; GO:0008270; GO:0030091; GO:0006979;
allko_ids K12267; K07305; K07304;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_040482806.1 1 130 evalue:2.9e-67 qcov:100.00 identity:88.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF01641;
pfam_desc SelR domain;
pfam_id SelR;
pfam_target db:Pfam-A.hmm|PF01641.18 evalue:2.8e-47 score:159.0 best_domain_score:158.8 name:SelR;
sprot_desc Peptide methionine sulfoxide reductase MsrB;
sprot_id sp|B0BYW4|MSRB_ACAM1;
sprot_target db:uniprot_sprot|sp|B0BYW4|MSRB_ACAM1 1 128 evalue:8.7e-42 qcov:98.50 identity:62.30;
tigrfam_acc TIGR00357;
tigrfam_desc methionine-R-sulfoxide reductase;
tigrfam_mainrole Cellular processes;
tigrfam_name TIGR00357;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00357 evalue:1.1e-51 score:173.6 best_domain_score:173.4 name:TIGR00357;
25723 24863 CDS
ID metaerg.pl|10953
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
sp YES;
24863 24919 lipoprotein_signal_peptide
ID metaerg.pl|10954
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
26282 25794 CDS
ID metaerg.pl|10955
allgo_ids GO:0019867;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953773.1 1 160 evalue:4.9e-72 qcov:98.80 identity:87.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF04355;
pfam_desc SmpA / OmlA family;
pfam_id SmpA_OmlA;
pfam_target db:Pfam-A.hmm|PF04355.13 evalue:2.3e-12 score:45.7 best_domain_score:45.3 name:SmpA_OmlA;
sp YES;
25794 25871 lipoprotein_signal_peptide
ID metaerg.pl|10956
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
26298 26909 CDS
ID metaerg.pl|10957
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087212854.1 6 202 evalue:4.3e-73 qcov:97.00 identity:72.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF02620;
pfam_desc Large ribosomal RNA subunit accumulation protein YceD;
pfam_id YceD;
pfam_target db:Pfam-A.hmm|PF02620.17 evalue:1.1e-12 score:47.3 best_domain_score:46.9 name:YceD;
27073 27279 CDS
ID metaerg.pl|10958
allgo_ids GO:0003735; GO:0006412; GO:0015934;
allko_ids K02911;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953775.1 1 68 evalue:3.9e-31 qcov:100.00 identity:98.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF01783;
pfam_desc Ribosomal L32p protein family;
pfam_id Ribosomal_L32p;
pfam_target db:Pfam-A.hmm|PF01783.23 evalue:5.4e-25 score:86.7 best_domain_score:86.5 name:Ribosomal_L32p;
sprot_desc 50S ribosomal protein L32;
sprot_id sp|Q1GI67|RL32_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GI67|RL32_RUEST 1 68 evalue:1.4e-27 qcov:100.00 identity:80.90;
tigrfam_acc TIGR01031;
tigrfam_desc ribosomal protein bL32;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpmF_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01031 evalue:6.5e-25 score:86.3 best_domain_score:86.1 name:TIGR01031;
27303 28415 CDS
ID metaerg.pl|10959
allec_ids 2.3.1.274;
allgo_ids GO:0003824; GO:0006633; GO:0016747; GO:0005737; GO:0043811; GO:0008654;
allko_ids K03621;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087207354.1 1 370 evalue:2.3e-178 qcov:100.00 identity:87.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF02504;
pfam_desc Fatty acid synthesis protein;
pfam_id FA_synthesis;
pfam_target db:Pfam-A.hmm|PF02504.15 evalue:1.6e-100 score:335.5 best_domain_score:335.3 name:FA_synthesis;
sprot_desc Phosphate acyltransferase;
sprot_id sp|A1B363|PLSX_PARDP;
sprot_target db:uniprot_sprot|sp|A1B363|PLSX_PARDP 15 352 evalue:3.8e-127 qcov:91.40 identity:70.10;
tigrfam_acc TIGR00182;
tigrfam_desc fatty acid/phospholipid synthesis protein PlsX;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name plsX;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00182 evalue:1.3e-85 score:286.7 best_domain_score:286.4 name:TIGR00182;
28417 29388 CDS
ID metaerg.pl|10960
allec_ids 2.3.1.180;
allgo_ids GO:0004315; GO:0006633; GO:0005737; GO:0033818;
allko_ids K00648;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953777.1 1 323 evalue:5.2e-166 qcov:100.00 identity:94.10;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id PWY-6519; PWY-5156; PWY-4381; PWY0-881; PWY-6113; PWY-6285; BIOTIN-BIOSYNTHESIS-PWY; FASYN-INITIAL-PWY;
metacyc_pathway_name 8-amino-7-oxononanoate biosynthesis I;; superpathway of fatty acid biosynthesis II (plant);; fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; biotin biosynthesis I;; superpathway of fatty acid biosynthesis initiation (E. coli);;
metacyc_pathway_type 7-Keto-8-aminopelargonate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF08545; PF08541; PF00108;
pfam_desc 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; Thiolase, N-terminal domain;
pfam_id ACP_syn_III; ACP_syn_III_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF08545.10 evalue:3.2e-33 score:112.7 best_domain_score:111.6 name:ACP_syn_III; db:Pfam-A.hmm|PF08541.10 evalue:3e-36 score:122.7 best_domain_score:121.3 name:ACP_syn_III_C; db:Pfam-A.hmm|PF00108.23 evalue:4.1e-09 score:35.4 best_domain_score:35.4 name:Thiolase_N;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] synthase 3;
sprot_id sp|Q5LQJ5|FABH_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LQJ5|FABH_RUEPO 1 323 evalue:1.1e-143 qcov:100.00 identity:79.60;
tigrfam_acc TIGR00747;
tigrfam_desc 3-oxoacyl-[acyl-carrier-protein] synthase III;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabH;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00747 evalue:7e-120 score:399.1 best_domain_score:398.9 name:TIGR00747;
29486 29788 CDS
ID metaerg.pl|10961
allgo_ids GO:0003677; GO:0006310; GO:0006355; GO:0006417;
allko_ids K04764;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_007205029.1 1 100 evalue:3.7e-46 qcov:100.00 identity:96.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00216; PF18291;
pfam_desc Bacterial DNA-binding protein; HU domain fused to wHTH, Ig, or Glycine-rich motif;
pfam_id Bac_DNA_binding; HU-HIG;
pfam_target db:Pfam-A.hmm|PF00216.21 evalue:1.1e-27 score:95.3 best_domain_score:95.1 name:Bac_DNA_binding; db:Pfam-A.hmm|PF18291.1 evalue:2.4e-07 score:30.1 best_domain_score:29.9 name:HU-HIG;
sprot_desc Integration host factor subunit alpha;
sprot_id sp|A8LLT5|IHFA_DINSH;
sprot_target db:uniprot_sprot|sp|A8LLT5|IHFA_DINSH 1 100 evalue:3.3e-41 qcov:100.00 identity:82.00;
tigrfam_acc TIGR00987;
tigrfam_desc integration host factor, alpha subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name himA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00987 evalue:2.8e-44 score:148.6 best_domain_score:148.5 name:TIGR00987;
29792 30346 CDS
ID metaerg.pl|10962
allgo_ids GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953779.1 1 181 evalue:1.0e-65 qcov:98.40 identity:74.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00376; PF13411;
pfam_desc MerR family regulatory protein; MerR HTH family regulatory protein;
pfam_id MerR; MerR_1;
pfam_target db:Pfam-A.hmm|PF00376.23 evalue:2.7e-08 score:32.7 best_domain_score:31.8 name:MerR; db:Pfam-A.hmm|PF13411.6 evalue:9.4e-20 score:69.7 best_domain_score:69.2 name:MerR_1;
30405 30481 tRNA
ID metaerg.pl|10963
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
name tRNA_Pro_ggg;
30546 31628 CDS
ID metaerg.pl|10964
allgo_ids GO:0008829; GO:0009394;
allko_ids K01494;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_110549008.1 1 360 evalue:1.6e-187 qcov:100.00 identity:90.60;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF06559;
pfam_desc 2'-deoxycytidine 5'-triphosphate deaminase (DCD);
pfam_id DCD;
pfam_target db:Pfam-A.hmm|PF06559.11 evalue:1.6e-167 score:556.1 best_domain_score:555.9 name:DCD;
31806 31618 CDS
ID metaerg.pl|10965
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
32493 31852 CDS
ID metaerg.pl|10966
allgo_ids GO:0051304; GO:0005737; GO:0051301;
allko_ids K06024;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_007205034.1 1 213 evalue:6.8e-106 qcov:100.00 identity:90.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF04079;
pfam_desc Segregation and condensation complex subunit ScpB;
pfam_id SMC_ScpB;
pfam_target db:Pfam-A.hmm|PF04079.16 evalue:3.3e-47 score:159.3 best_domain_score:159.0 name:SMC_ScpB;
sprot_desc Segregation and condensation protein B homolog;
sprot_id sp|Q83CP9|SCPBL_COXBU;
sprot_target db:uniprot_sprot|sp|Q83CP9|SCPBL_COXBU 21 178 evalue:1.2e-21 qcov:74.20 identity:33.50;
tigrfam_acc TIGR00281;
tigrfam_desc segregation and condensation protein B;
tigrfam_mainrole DNA metabolism;
tigrfam_name TIGR00281;
tigrfam_sub1role Chromosome-associated proteins;
tigrfam_target db:TIGRFAMs.hmm|TIGR00281 evalue:6e-31 score:106.6 best_domain_score:106.3 name:TIGR00281;
33280 32486 CDS
ID metaerg.pl|10967
allgo_ids GO:0005737; GO:0007049; GO:0051301; GO:0007059;
allko_ids K05896;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953783.1 1 264 evalue:3.1e-132 qcov:100.00 identity:93.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF02616;
pfam_desc Segregation and condensation protein ScpA;
pfam_id SMC_ScpA;
pfam_target db:Pfam-A.hmm|PF02616.14 evalue:1.5e-11 score:43.9 best_domain_score:39.2 name:SMC_ScpA;
sprot_desc Segregation and condensation protein A;
sprot_id sp|Q83CP8|SCPA_COXBU;
sprot_target db:uniprot_sprot|sp|Q83CP8|SCPA_COXBU 17 259 evalue:1.3e-20 qcov:92.00 identity:33.10;
34276 33287 CDS
ID metaerg.pl|10968
allec_ids 3.2.1.52;
allgo_ids GO:0004553; GO:0005975; GO:0005737; GO:0004563; GO:0102148; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0009254; GO:0008360;
allko_ids K01207;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087207368.1 1 329 evalue:6.8e-153 qcov:100.00 identity:80.90;
kegg_pathway_id 00530; 01032;
kegg_pathway_name Aminosugars metabolism; Glycan structures - degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id PWY-6573;
metacyc_pathway_name chondroitin sulfate degradation (metazoa);;
metacyc_pathway_type Glycan-Degradation; Glycosaminoglycan-Degradation;;
pfam_acc PF00933;
pfam_desc Glycosyl hydrolase family 3 N terminal domain;
pfam_id Glyco_hydro_3;
pfam_target db:Pfam-A.hmm|PF00933.21 evalue:3.7e-45 score:153.9 best_domain_score:153.6 name:Glyco_hydro_3;
sprot_desc Beta-hexosaminidase;
sprot_id sp|Q0A911|NAGZ_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0A911|NAGZ_ALKEH 30 278 evalue:1.6e-36 qcov:75.70 identity:38.10;
35209 34277 CDS
ID metaerg.pl|10969
allgo_ids GO:0042834;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_026352188.1 1 310 evalue:2.5e-125 qcov:100.00 identity:78.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF05036;
pfam_desc Sporulation related domain;
pfam_id SPOR;
pfam_target db:Pfam-A.hmm|PF05036.13 evalue:1.8e-14 score:53.1 best_domain_score:52.8 name:SPOR;
tm_num 1;
35209 34277 transmembrane_helix
ID metaerg.pl|10970
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology i34331-34399o;
37022 35280 CDS
ID metaerg.pl|10971
allec_ids 6.1.1.19;
allgo_ids GO:0000166; GO:0004814; GO:0005524; GO:0005737; GO:0006420;
allko_ids K01887;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087212861.1 1 580 evalue:0.0e+00 qcov:100.00 identity:92.10;
kegg_pathway_id 00970; 00330;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Arginine and proline metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03485; PF05746; PF00133; PF00750; PF01406; PF01921; PF09334;
pfam_desc Arginyl tRNA synthetase N terminal domain; DALR anticodon binding domain; tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (R); tRNA synthetases class I (C) catalytic domain; tRNA synthetases class I (K); tRNA synthetases class I (M);
pfam_id Arg_tRNA_synt_N; DALR_1; tRNA-synt_1; tRNA-synt_1d; tRNA-synt_1e; tRNA-synt_1f; tRNA-synt_1g;
pfam_target db:Pfam-A.hmm|PF03485.16 evalue:3.7e-21 score:74.7 best_domain_score:72.6 name:Arg_tRNA_synt_N; db:Pfam-A.hmm|PF05746.15 evalue:1.5e-31 score:108.3 best_domain_score:106.8 name:DALR_1; db:Pfam-A.hmm|PF00133.22 evalue:1.1e-05 score:23.1 best_domain_score:11.9 name:tRNA-synt_1; db:Pfam-A.hmm|PF00750.19 evalue:1.3e-16 score:59.8 best_domain_score:56.6 name:tRNA-synt_1d; db:Pfam-A.hmm|PF01406.19 evalue:5.4e-07 score:28.5 best_domain_score:14.5 name:tRNA-synt_1e; db:Pfam-A.hmm|PF01921.18 evalue:9.6e-07 score:27.3 best_domain_score:17.5 name:tRNA-synt_1f; db:Pfam-A.hmm|PF09334.11 evalue:2.6e-06 score:25.7 best_domain_score:13.8 name:tRNA-synt_1g;
sprot_desc Arginine--tRNA ligase;
sprot_id sp|Q5LQI6|SYR_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LQI6|SYR_RUEPO 1 580 evalue:8.3e-262 qcov:100.00 identity:76.90;
tigrfam_acc TIGR00456;
tigrfam_desc arginine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name argS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00456 evalue:1.4e-107 score:359.5 best_domain_score:357.8 name:TIGR00456;
38246 37074 CDS
ID metaerg.pl|10972
allec_ids 3.1.5.1;
allgo_ids GO:0016793;
allko_ids K01129;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953787.1 1 390 evalue:1.8e-216 qcov:100.00 identity:94.90;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF01966; PF13286;
pfam_desc HD domain; Phosphohydrolase-associated domain;
pfam_id HD; HD_assoc;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:2.8e-15 score:55.9 best_domain_score:54.9 name:HD; db:Pfam-A.hmm|PF13286.6 evalue:5.4e-27 score:93.4 best_domain_score:89.7 name:HD_assoc;
sprot_desc Deoxyguanosinetriphosphate triphosphohydrolase-like protein;
sprot_id sp|Q164B9|DGTL1_ROSDO;
sprot_target db:uniprot_sprot|sp|Q164B9|DGTL1_ROSDO 1 381 evalue:5.2e-167 qcov:97.70 identity:76.10;
tigrfam_acc TIGR01353;
tigrfam_desc putative dGTPase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name dGTP_triPase;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01353 evalue:1.3e-95 score:320.4 best_domain_score:317.4 name:TIGR01353;
38319 38645 CDS
ID metaerg.pl|10973
allgo_ids GO:0005506; GO:0051536; GO:0005198; GO:0016226; GO:0097428;
allko_ids K15724;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087212864.1 1 108 evalue:1.6e-50 qcov:100.00 identity:96.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF01521;
pfam_desc Iron-sulphur cluster biosynthesis;
pfam_id Fe-S_biosyn;
pfam_target db:Pfam-A.hmm|PF01521.20 evalue:4.1e-17 score:61.6 best_domain_score:61.4 name:Fe-S_biosyn;
sprot_desc Iron-sulfur cluster insertion protein ErpA;
sprot_id sp|B4SLD1|ERPA_STRM5;
sprot_target db:uniprot_sprot|sp|B4SLD1|ERPA_STRM5 27 108 evalue:1.7e-19 qcov:75.90 identity:53.00;
tigrfam_acc TIGR00049;
tigrfam_desc iron-sulfur cluster assembly accessory protein;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00049;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00049 evalue:4.6e-30 score:103.1 best_domain_score:102.8 name:TIGR00049;
38677 39456 CDS
ID metaerg.pl|10974
allec_ids 3.1.11.2;
allko_ids K10772; K01741;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Loktanella;s__Loktanella salsilacus;
genomedb_acc GCF_900114485.1;
genomedb_target db:genomedb|GCF_900114485.1|WP_090187651.1 1 259 evalue:5.9e-128 qcov:100.00 identity:82.20;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF03372;
pfam_desc Endonuclease/Exonuclease/phosphatase family;
pfam_id Exo_endo_phos;
pfam_target db:Pfam-A.hmm|PF03372.23 evalue:3.8e-21 score:74.9 best_domain_score:74.7 name:Exo_endo_phos;
tigrfam_acc TIGR00195; TIGR00633;
tigrfam_desc exodeoxyribonuclease III; exodeoxyribonuclease III (xth);
tigrfam_mainrole DNA metabolism; DNA metabolism;
tigrfam_name exoDNase_III; xth;
tigrfam_sub1role DNA replication, recombination, and repair; DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00195 evalue:2.1e-73 score:246.2 best_domain_score:246.1 name:TIGR00195; db:TIGRFAMs.hmm|TIGR00633 evalue:2.3e-67 score:226.4 best_domain_score:226.2 name:TIGR00633;
40723 39521 CDS
ID metaerg.pl|10975
allec_ids 1.14.13.24;
allgo_ids GO:0071949; GO:0018669; GO:0019439;
allko_ids K00480;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_040482809.1 19 399 evalue:2.9e-142 qcov:95.20 identity:68.50;
kegg_pathway_id 00624; 00626;
kegg_pathway_name 1- and 2-Methylnaphthalene degradation; Naphthalene and anthracene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id M-CRESOL-DEGRADATION-PWY; PWY-6228;
metacyc_pathway_name m-cresol degradation;; 3-chlorobenzoate degradation III (via gentisate);;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;; 3-Chlorobenzoate-Degradation;;
pfam_acc PF01494; PF13450; PF00070; PF07992; PF04820;
pfam_desc FAD binding domain; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Tryptophan halogenase;
pfam_id FAD_binding_3; NAD_binding_8; Pyr_redox; Pyr_redox_2; Trp_halogenase;
pfam_target db:Pfam-A.hmm|PF01494.19 evalue:6.1e-29 score:100.6 best_domain_score:100.0 name:FAD_binding_3; db:Pfam-A.hmm|PF13450.6 evalue:7.3e-06 score:25.4 best_domain_score:24.7 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:6.3e-05 score:22.7 best_domain_score:16.6 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:4.2e-07 score:28.7 best_domain_score:19.4 name:Pyr_redox_2; db:Pfam-A.hmm|PF04820.14 evalue:0.00019 score:19.7 best_domain_score:15.4 name:Trp_halogenase;
sp YES;
sprot_desc 3-hydroxybenzoate 6-hydroxylase 1;
sprot_id sp|Q9F131|3HBH1_PSEAC;
sprot_target db:uniprot_sprot|sp|Q9F131|3HBH1_PSEAC 27 394 evalue:7.0e-42 qcov:92.00 identity:33.10;
tm_num 1;
39521 39652 signal_peptide
ID metaerg.pl|10976
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
40723 39521 transmembrane_helix
ID metaerg.pl|10977
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology i39581-39649o;
41093 40671 CDS
ID metaerg.pl|10978
allgo_ids GO:0008270; GO:0005737; GO:0010468;
allko_ids K06204;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087212867.1 1 140 evalue:1.5e-69 qcov:100.00 identity:97.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF01258;
pfam_desc Prokaryotic dksA/traR C4-type zinc finger;
pfam_id zf-dskA_traR;
pfam_target db:Pfam-A.hmm|PF01258.17 evalue:7.9e-10 score:37.8 best_domain_score:36.8 name:zf-dskA_traR;
sprot_desc RNA polymerase-binding transcription factor DksA;
sprot_id sp|P0CAU3|DKSA_CAUVC;
sprot_target db:uniprot_sprot|sp|P0CAU3|DKSA_CAUVC 9 140 evalue:7.1e-50 qcov:94.30 identity:72.00;
tigrfam_acc TIGR02420;
tigrfam_desc RNA polymerase-binding protein DksA;
tigrfam_mainrole Regulatory functions;
tigrfam_name dksA;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02420 evalue:8.3e-43 score:144.5 best_domain_score:144.2 name:TIGR02420;
41274 42116 CDS
ID metaerg.pl|10979
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087207381.1 1 279 evalue:1.6e-147 qcov:99.60 identity:93.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00004; PF07724; PF07728; PF00158;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); AAA domain (dynein-related subfamily); Sigma-54 interaction domain;
pfam_id AAA; AAA_2; AAA_5; Sigma54_activat;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:5.8e-12 score:45.4 best_domain_score:44.5 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:1.1e-06 score:28.1 best_domain_score:27.6 name:AAA_2; db:Pfam-A.hmm|PF07728.14 evalue:3.7e-12 score:45.6 best_domain_score:44.4 name:AAA_5; db:Pfam-A.hmm|PF00158.26 evalue:2.2e-06 score:26.7 best_domain_score:13.7 name:Sigma54_activat;
42194 43552 CDS
ID metaerg.pl|10980
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_110570895.1 1 452 evalue:5.4e-193 qcov:100.00 identity:77.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF11150;
pfam_desc Protein of unknown function (DUF2927);
pfam_id DUF2927;
pfam_target db:Pfam-A.hmm|PF11150.8 evalue:4.8e-51 score:173.0 best_domain_score:171.6 name:DUF2927;
sp YES;
42194 42235 lipoprotein_signal_peptide
ID metaerg.pl|10981
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
43808 44941 CDS
ID metaerg.pl|10982
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_007205048.1 1 377 evalue:1.8e-210 qcov:100.00 identity:93.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF05762;
pfam_desc VWA domain containing CoxE-like protein;
pfam_id VWA_CoxE;
pfam_target db:Pfam-A.hmm|PF05762.14 evalue:2.7e-09 score:36.0 best_domain_score:33.4 name:VWA_CoxE;
44938 45567 CDS
ID metaerg.pl|10983
allgo_ids GO:0003824; GO:0030151; GO:0030170;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia tamlensis;
genomedb_acc GCF_900115105.1;
genomedb_target db:genomedb|GCF_900115105.1|WP_090198650.1 1 208 evalue:1.5e-73 qcov:99.50 identity:64.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF03473;
pfam_desc MOSC domain;
pfam_id MOSC;
pfam_target db:Pfam-A.hmm|PF03473.17 evalue:8e-16 score:57.5 best_domain_score:56.9 name:MOSC;
45629 46312 CDS
ID metaerg.pl|10984
allgo_ids GO:0004222; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953797.1 1 227 evalue:1.4e-112 qcov:100.00 identity:90.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:8.7e-23 score:80.3 best_domain_score:79.7 name:Peptidase_M48;
tm_num 2;
45629 46312 transmembrane_helix
ID metaerg.pl|10985
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology o45638-45694i46022-46090o;
46929 46309 CDS
ID metaerg.pl|10986
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HL-12;s__HL-12 sp900177545;
genomedb_acc GCF_900177545.1;
genomedb_target db:genomedb|GCF_900177545.1|WP_085528025.1 1 206 evalue:1.3e-72 qcov:100.00 identity:66.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF08818; PF13376;
pfam_desc Domain of unknown function (DU1801); Bacteriocin-protection, YdeI or OmpD-Associated;
pfam_id DUF1801; OmdA;
pfam_target db:Pfam-A.hmm|PF08818.11 evalue:1.1e-09 score:37.9 best_domain_score:35.6 name:DUF1801; db:Pfam-A.hmm|PF13376.6 evalue:2.1e-14 score:52.5 best_domain_score:51.4 name:OmdA;
47478 46936 CDS
ID metaerg.pl|10987
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_007205050.1 1 179 evalue:7.6e-82 qcov:99.40 identity:87.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF13470;
pfam_desc PIN domain;
pfam_id PIN_3;
pfam_target db:Pfam-A.hmm|PF13470.6 evalue:1.4e-12 score:47.6 best_domain_score:47.0 name:PIN_3;
48680 47475 CDS
ID metaerg.pl|10988
allec_ids 2.1.1.191;
allgo_ids GO:0001510; GO:0008168; GO:0009452; GO:0005737; GO:0003723; GO:0016434;
allko_ids K06969;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_A;
genomedb_acc GCF_000152785.1;
genomedb_target db:genomedb|GCF_000152785.1|WP_007205051.1 1 401 evalue:8.1e-209 qcov:100.00 identity:91.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF03602; PF09445; PF13649; PF13847; PF10672; PF05175; PF17785;
pfam_desc Conserved hypothetical protein 95; RNA cap guanine-N2 methyltransferase; Methyltransferase domain; Methyltransferase domain; S-adenosylmethionine-dependent methyltransferase; Methyltransferase small domain; PUA-like domain;
pfam_id Cons_hypoth95; Methyltransf_15; Methyltransf_25; Methyltransf_31; Methyltrans_SAM; MTS; PUA_3;
pfam_target db:Pfam-A.hmm|PF03602.15 evalue:4.3e-12 score:45.3 best_domain_score:44.7 name:Cons_hypoth95; db:Pfam-A.hmm|PF09445.10 evalue:9.8e-07 score:27.7 best_domain_score:27.0 name:Methyltransf_15; db:Pfam-A.hmm|PF13649.6 evalue:2.8e-06 score:27.2 best_domain_score:26.3 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.9e-10 score:40.0 best_domain_score:37.9 name:Methyltransf_31; db:Pfam-A.hmm|PF10672.9 evalue:1.4e-15 score:56.5 best_domain_score:55.9 name:Methyltrans_SAM; db:Pfam-A.hmm|PF05175.14 evalue:1.1e-05 score:24.2 best_domain_score:23.2 name:MTS; db:Pfam-A.hmm|PF17785.1 evalue:1e-12 score:46.9 best_domain_score:45.8 name:PUA_3;
sprot_desc Ribosomal RNA large subunit methyltransferase I;
sprot_id sp|A7ME44|RLMI_CROS8;
sprot_target db:uniprot_sprot|sp|A7ME44|RLMI_CROS8 12 395 evalue:8.9e-45 qcov:95.80 identity:32.40;
49301 48732 CDS
ID metaerg.pl|10989
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953800.1 1 189 evalue:2.1e-74 qcov:100.00 identity:73.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
sp YES;
48732 48782 lipoprotein_signal_peptide
ID metaerg.pl|10990
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
49457 51262 CDS
ID metaerg.pl|10991
allec_ids 4.2.1.12;
allgo_ids GO:0003824; GO:0051539; GO:0046872; GO:0004456; GO:0019521; GO:0009255;
allko_ids K01690;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953801.1 1 601 evalue:0.0e+00 qcov:100.00 identity:90.70;
kegg_pathway_id 00030;
kegg_pathway_name Pentose phosphate pathway;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id GLYCOLYSIS-E-D; ENTNER-DOUDOROFF-PWY;
metacyc_pathway_name superpathway of glycolysis and the Entner-Doudoroff pathway;; Entner-Doudoroff shunt;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Entner-Duodoroff-Pathways;;
pfam_acc PF00920;
pfam_desc Dehydratase family;
pfam_id ILVD_EDD;
pfam_target db:Pfam-A.hmm|PF00920.21 evalue:1.6e-156 score:521.2 best_domain_score:521.0 name:ILVD_EDD;
sprot_desc Phosphogluconate dehydratase;
sprot_id sp|Q9Z3S0|EDD_RHIME;
sprot_target db:uniprot_sprot|sp|Q9Z3S0|EDD_RHIME 7 600 evalue:2.3e-214 qcov:98.80 identity:63.40;
tigrfam_acc TIGR01196;
tigrfam_desc phosphogluconate dehydratase;
tigrfam_mainrole Energy metabolism;
tigrfam_name edd;
tigrfam_sub1role Entner-Doudoroff;
tigrfam_target db:TIGRFAMs.hmm|TIGR01196 evalue:1.1e-281 score:934.6 best_domain_score:934.4 name:TIGR01196;
51433 52356 CDS
ID metaerg.pl|10992
allec_ids 3.4.24.-;
allgo_ids GO:0004222; GO:0006508; GO:0016021; GO:0005886; GO:0008270;
allko_ids K03799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sagittula;s__Sagittula sp002814095;
genomedb_acc GCF_002814095.1;
genomedb_target db:genomedb|GCF_002814095.1|WP_100930453.1 1 307 evalue:6.5e-142 qcov:100.00 identity:85.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:2.1e-40 score:137.8 best_domain_score:137.2 name:Peptidase_M48;
sprot_desc Protease HtpX homolog;
sprot_id sp|A3PLU3|HTPX_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PLU3|HTPX_RHOS1 1 306 evalue:4.8e-99 qcov:99.70 identity:65.00;
tm_num 3;
51433 52356 transmembrane_helix
ID metaerg.pl|10993
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology i51490-51558o51853-51921i51940-52008o;
53517 52498 CDS
ID metaerg.pl|10994
allec_ids 1.8.5.7;
allgo_ids GO:0005515; GO:0004364; GO:0016672;
allko_ids K07393;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Planktotalea;s__Planktotalea arctica;
genomedb_acc GCF_002105285.1;
genomedb_target db:genomedb|GCF_002105285.1|WP_085308136.1 1 338 evalue:1.7e-154 qcov:99.70 identity:76.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00043; PF13410; PF13409;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_2; GST_N_2;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:3.1e-06 score:26.6 best_domain_score:25.6 name:GST_C; db:Pfam-A.hmm|PF13410.6 evalue:9e-13 score:47.3 best_domain_score:46.2 name:GST_C_2; db:Pfam-A.hmm|PF13409.6 evalue:7.2e-15 score:54.3 best_domain_score:53.3 name:GST_N_2;
sprot_desc Glutathionyl-hydroquinone reductase YqjG;
sprot_id sp|P42620|YQJG_ECOLI;
sprot_target db:uniprot_sprot|sp|P42620|YQJG_ECOLI 21 330 evalue:2.1e-47 qcov:91.40 identity:37.80;
53629 54144 CDS
ID metaerg.pl|10995
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter;s__Sulfitobacter sp001635605;
genomedb_acc GCF_001635605.1;
genomedb_target db:genomedb|GCF_001635605.1|WP_067260754.1 1 170 evalue:7.7e-76 qcov:99.40 identity:82.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF09722;
pfam_desc Protein of unknown function (DUF2384);
pfam_id DUF2384;
pfam_target db:Pfam-A.hmm|PF09722.10 evalue:2e-09 score:36.6 best_domain_score:35.6 name:DUF2384;
54141 54815 CDS
ID metaerg.pl|10996
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Sulfitobacter;s__Sulfitobacter litoralis;
genomedb_acc GCF_900103185.1;
genomedb_target db:genomedb|GCF_900103185.1|WP_093734446.1 3 224 evalue:1.8e-101 qcov:99.10 identity:80.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF08808;
pfam_desc RES domain;
pfam_id RES;
pfam_target db:Pfam-A.hmm|PF08808.11 evalue:1.9e-23 score:82.3 best_domain_score:81.7 name:RES;
55407 55042 CDS
ID metaerg.pl|10997
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Palleronia;s__Palleronia marisminoris;
genomedb_acc GCF_900172315.1;
genomedb_target db:genomedb|GCF_900172315.1|WP_085855166.1 11 105 evalue:1.2e-17 qcov:78.50 identity:52.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00188;
pfam_desc Cysteine-rich secretory protein family;
pfam_id CAP;
pfam_target db:Pfam-A.hmm|PF00188.26 evalue:2.9e-08 score:33.8 best_domain_score:33.5 name:CAP;
sp YES;
55042 55119 signal_peptide
ID metaerg.pl|10998
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
57271 55454 CDS
ID metaerg.pl|10999
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter sp000526275;
genomedb_acc GCF_000526275.1;
genomedb_target db:genomedb|GCF_000526275.1|WP_024810198.1 1 604 evalue:9.5e-270 qcov:99.80 identity:77.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF13336;
pfam_desc Acetyl-CoA hydrolase/transferase C-terminal domain;
pfam_id AcetylCoA_hyd_C;
pfam_target db:Pfam-A.hmm|PF13336.6 evalue:6.6e-42 score:142.3 best_domain_score:141.5 name:AcetylCoA_hyd_C;
59353 57275 CDS
ID metaerg.pl|11000
allec_ids 4.2.1.17; 5.1.2.3; 1.1.1.35;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0005737; GO:0008692; GO:0004300; GO:0051287; GO:0006635;
allko_ids K13767; K13816; K15016; K07516; K01782; K00022; K01692; K07511; K07515; K01825; K10527; K07514;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter sp000526275;
genomedb_acc GCF_000526275.1;
genomedb_target db:genomedb|GCF_000526275.1|WP_081751785.1 1 692 evalue:2.5e-306 qcov:100.00 identity:75.40;
kegg_pathway_id 00380; 00930; 00632; 00280; 00281; 00310; 00640; 00650; 00592; 00410; 00071; 01040; 00062; 00903;
kegg_pathway_name Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; Propanoate metabolism; Butanoate metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Biosynthesis of unsaturated fatty acids; Fatty acid elongation in mitochondria; Limonene and pinene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id PWY-5789; PWY-561; PWY-5184; CENTFERM-PWY; PWY-6435; TRYPTOPHAN-DEGRADATION-1; PWY-5138; P3-PWY; VALDEG-PWY; ILEUDEG-PWY; FAO-PWY; PWY-5177; GLUDEG-II-PWY; PWY-5136;
metacyc_pathway_name 3-hydroxypropanoate/4-hydroxybutanate cycle;; superpathway of glyoxylate cycle and fatty acid degradation;; toluene degradation VI (anaerobic);; pyruvate fermentation to butanoate;; 4-hydroxybenzoate biosynthesis III (plants);; L-tryptophan degradation III (eukaryotic);; unsaturated, even numbered fatty acid β-oxidation;; gallate degradation III (anaerobic);; L-valine degradation I;; L-isoleucine degradation I;; fatty acid β-oxidation I;; glutaryl-CoA degradation;; L-glutamate degradation VII (to butanoate);; fatty acid β-oxidation II (peroxisome);;
metacyc_pathway_type Autotrophic-CO2-Fixation;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;; 4-Hydroxybenzoate-Biosynthesis;; Super-Pathways; TRYPTOPHAN-DEG;; Fatty-Acid-Degradation;; GALLATE-DEG;; VALINE-DEG;; ISOLEUCINE-DEG;; Fatty-Acid-Degradation;; CARBOXYLATES-DEG;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Fatty-Acid-Degradation;;
pfam_acc PF00725; PF02737; PF00378; PF16113;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id 3HCDH; 3HCDH_N; ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00725.22 evalue:3.4e-27 score:94.2 best_domain_score:83.7 name:3HCDH; db:Pfam-A.hmm|PF02737.18 evalue:2.1e-42 score:144.3 best_domain_score:143.2 name:3HCDH_N; db:Pfam-A.hmm|PF00378.20 evalue:6.6e-29 score:100.2 best_domain_score:99.6 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:1.5e-25 score:89.6 best_domain_score:89.0 name:ECH_2;
sprot_desc Fatty acid oxidation complex subunit alpha;
sprot_id sp|Q0HKD1|FADJ_SHESM;
sprot_target db:uniprot_sprot|sp|Q0HKD1|FADJ_SHESM 27 692 evalue:1.9e-87 qcov:96.20 identity:32.80;
60636 59353 CDS
ID metaerg.pl|11001
allec_ids 2.3.1.16;
allgo_ids GO:0016747; GO:0005737; GO:0003988; GO:0006635;
allko_ids K07550; K00626; K07509; K00632; K02615; K07513; K07508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter sp000526275;
genomedb_acc GCF_000526275.1;
genomedb_target db:genomedb|GCF_000526275.1|WP_024810200.1 1 425 evalue:1.9e-216 qcov:99.50 identity:86.40;
kegg_pathway_id 00280; 00281; 00310; 00071; 02020; 00072; 00380; 00632; 00120; 00650; 00640; 00592; 01040; 00362; 00062; 00620;
kegg_pathway_name Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; Fatty acid metabolism; Two-component system - General; Synthesis and degradation of ketone bodies; Tryptophan metabolism; Benzoate degradation via CoA ligation; Bile acid biosynthesis; Butanoate metabolism; Propanoate metabolism; alpha-Linolenic acid metabolism; Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation; Fatty acid elongation in mitochondria; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id PWY-5136; FAO-PWY; PWY-6435; PWY-561;
metacyc_pathway_name fatty acid β-oxidation II (peroxisome);; fatty acid β-oxidation I;; 4-hydroxybenzoate biosynthesis III (plants);; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Fatty-Acid-Degradation;; Fatty-Acid-Degradation;; 4-Hydroxybenzoate-Biosynthesis;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00109; PF02803; PF00108;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id ketoacyl-synt; Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:1.6e-07 score:30.4 best_domain_score:27.5 name:ketoacyl-synt; db:Pfam-A.hmm|PF02803.18 evalue:1.1e-35 score:121.2 best_domain_score:119.9 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:2.7e-57 score:193.3 best_domain_score:192.1 name:Thiolase_N;
sprot_desc 3-ketoacyl-CoA thiolase;
sprot_id sp|A7MQM5|FADA_CROS8;
sprot_target db:uniprot_sprot|sp|A7MQM5|FADA_CROS8 5 427 evalue:1.1e-58 qcov:99.10 identity:36.80;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:5.1e-120 score:400.1 best_domain_score:399.9 name:TIGR01930;
62882 60633 CDS
ID metaerg.pl|11002
allec_ids 1.3.8.7;
allgo_ids GO:0016627; GO:0055114; GO:0005886; GO:0003995; GO:0050660; GO:0033539;
allko_ids K14448; K06446; K00248; K00249; K06445;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Lutimaribacter;s__Lutimaribacter sp000526275;
genomedb_acc GCF_000526275.1;
genomedb_target db:genomedb|GCF_000526275.1|WP_024810201.1 1 749 evalue:0.0e+00 qcov:100.00 identity:82.50;
kegg_pathway_id 00280; 00410; 00930; 00071; 00640; 00650;
kegg_pathway_name Valine, leucine and isoleucine degradation; beta-Alanine metabolism; Caprolactam degradation; Fatty acid metabolism; Propanoate metabolism; Butanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00441; PF02771; PF09317;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain; Domain of unknown function (DUF1974);
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_N; DUF1974;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:1.4e-15 score:57.1 best_domain_score:56.1 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF02771.16 evalue:9e-15 score:54.6 best_domain_score:51.4 name:Acyl-CoA_dh_N; db:Pfam-A.hmm|PF09317.11 evalue:2e-85 score:286.1 best_domain_score:285.5 name:DUF1974;
sprot_desc Acyl-coenzyme A dehydrogenase;
sprot_id sp|Q47146|FADE_ECOLI;
sprot_target db:uniprot_sprot|sp|Q47146|FADE_ECOLI 5 731 evalue:9.3e-189 qcov:97.10 identity:47.30;
63757 62996 CDS
ID metaerg.pl|11003
allgo_ids GO:0009055; GO:0015035; GO:0045454;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus tibetensis;
genomedb_acc GCF_900102505.1;
genomedb_target db:genomedb|GCF_900102505.1|WP_090747277.1 1 252 evalue:1.5e-115 qcov:99.60 identity:83.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00462;
pfam_desc Glutaredoxin;
pfam_id Glutaredoxin;
pfam_target db:Pfam-A.hmm|PF00462.24 evalue:1.4e-06 score:27.7 best_domain_score:26.8 name:Glutaredoxin;
tm_num 5;
63757 62996 transmembrane_helix
ID metaerg.pl|11004
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology i63266-63334o63347-63415i63473-63541o63551-63619i63665-63733o;
64897 63887 CDS
ID metaerg.pl|11005
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657676.1 1 336 evalue:2.7e-133 qcov:100.00 identity:82.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF03601;
pfam_desc Conserved hypothetical protein 698;
pfam_id Cons_hypoth698;
pfam_target db:Pfam-A.hmm|PF03601.14 evalue:3e-60 score:202.9 best_domain_score:202.9 name:Cons_hypoth698;
sprot_desc hypothetical protein;
sprot_id sp|Q92UW5|Y5671_RHIME;
sprot_target db:uniprot_sprot|sp|Q92UW5|Y5671_RHIME 7 333 evalue:6.9e-67 qcov:97.30 identity:51.50;
tm_num 11;
64897 63887 transmembrane_helix
ID metaerg.pl|11006
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology i63905-63973o63983-64051i64070-64138o64166-64234i64253-64321o64349-64417i64451-64504o64547-64600i64634-64702o64730-64798i64817-64885o;
65747 65043 CDS
ID metaerg.pl|11007
allec_ids 2.3.1.12;
allgo_ids GO:0009058; GO:0016788; GO:0004742; GO:0045150;
allko_ids K00627;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481739.1 1 233 evalue:2.3e-94 qcov:99.60 identity:72.50;
kegg_pathway_id 00620; 00252; 00010; 00020;
kegg_pathway_name Pyruvate metabolism; Alanine and aspartate metabolism; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle);
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id PYRUVDEHYD-PWY; PWY-5173; PWY-5464;
metacyc_pathway_name pyruvate decarboxylation to acetyl CoA;; superpathway of acetyl-CoA biosynthesis;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Acetyl-CoA-Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00561; PF12697; PF12146; PF00975;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33; Thioesterase domain;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4; Thioesterase;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:7.5e-23 score:80.7 best_domain_score:69.3 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:2.2e-24 score:86.5 best_domain_score:86.3 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:2.6e-11 score:42.5 best_domain_score:42.0 name:Hydrolase_4; db:Pfam-A.hmm|PF00975.20 evalue:3.8e-06 score:26.4 best_domain_score:25.7 name:Thioesterase;
sprot_desc Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system;
sprot_id sp|P27747|ACOC_CUPNH;
sprot_target db:uniprot_sprot|sp|P27747|ACOC_CUPNH 2 233 evalue:5.4e-10 qcov:99.10 identity:27.70;
67097 65796 CDS
ID metaerg.pl|11008
allgo_ids GO:0016021; GO:0005886; GO:0015556; GO:0022857; GO:0015740;
allko_ids K11690;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481738.1 1 433 evalue:5.0e-212 qcov:100.00 identity:93.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:3.1e-78 score:262.7 best_domain_score:262.5 name:DctM;
sprot_desc C4-dicarboxylate TRAP transporter large permease protein DctM;
sprot_id sp|Q9KQS1|DCTM_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KQS1|DCTM_VIBCH 13 429 evalue:2.4e-43 qcov:96.30 identity:32.40;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:9.7e-86 score:287.2 best_domain_score:287.0 name:TIGR00786;
tm_num 11;
67097 65796 transmembrane_helix
ID metaerg.pl|11009
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology i65814-65882o65952-66020i66081-66149o66225-66293i66327-66395o66453-66521i66540-66608o66636-66704i66723-66791o66819-66887i66993-67061o;
67608 67084 CDS
ID metaerg.pl|11010
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072244187.1 1 174 evalue:2.9e-70 qcov:100.00 identity:80.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:1e-15 score:57.1 best_domain_score:57.1 name:DctQ;
tm_num 4;
67608 67084 transmembrane_helix
ID metaerg.pl|11011
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology i67117-67185o67228-67296i67360-67428o67486-67554i;
68643 67660 CDS
ID metaerg.pl|11012
allgo_ids GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072244188.1 1 326 evalue:5.9e-165 qcov:99.70 identity:87.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:3e-33 score:114.6 best_domain_score:70.7 name:DctP;
sp YES;
67660 67728 signal_peptide
ID metaerg.pl|11013
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
69785 68682 CDS
ID metaerg.pl|11014
allec_ids 4.4.1.25;
allgo_ids GO:0034011; GO:0030170; GO:0000098;
allko_ids K17950;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481735.1 32 367 evalue:4.1e-175 qcov:91.60 identity:90.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:1.8e-52 score:177.8 best_domain_score:177.6 name:PALP;
sprot_desc L-cysteate sulfo-lyase;
sprot_id sp|Q5LL69|CUYA_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LL69|CUYA_RUEPO 32 362 evalue:3.5e-112 qcov:90.20 identity:61.10;
tigrfam_acc TIGR01275;
tigrfam_desc pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family;
tigrfam_name ACC_deam_rel;
tigrfam_target db:TIGRFAMs.hmm|TIGR01275 evalue:1.6e-95 score:319.2 best_domain_score:318.9 name:TIGR01275;
69799 70692 CDS
ID metaerg.pl|11015
allgo_ids GO:0003700; GO:0006355; GO:0001017; GO:0042802; GO:0000976; GO:0006351;
allko_ids K21645;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084635042.1 1 297 evalue:8.0e-137 qcov:100.00 identity:84.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:1.9e-17 score:62.2 best_domain_score:59.7 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:3.3e-13 score:48.7 best_domain_score:48.2 name:LysR_substrate;
sprot_desc HTH-type transcriptional regulator YjiE;
sprot_id sp|P39376|YJIE_ECOLI;
sprot_target db:uniprot_sprot|sp|P39376|YJIE_ECOLI 4 292 evalue:4.3e-20 qcov:97.30 identity:27.70;
71016 70774 CDS
ID metaerg.pl|11016
allgo_ids GO:0005509;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia sp000169435;
genomedb_acc GCF_000169435.1;
genomedb_target db:genomedb|GCF_000169435.1|WP_008235136.1 1 79 evalue:1.8e-22 qcov:98.80 identity:67.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00036; PF13202; PF13405;
pfam_desc EF hand; EF hand; EF-hand domain;
pfam_id EF-hand_1; EF-hand_5; EF-hand_6;
pfam_target db:Pfam-A.hmm|PF00036.32 evalue:1.2e-06 score:26.9 best_domain_score:18.2 name:EF-hand_1; db:Pfam-A.hmm|PF13202.6 evalue:4e-09 score:34.8 best_domain_score:21.7 name:EF-hand_5; db:Pfam-A.hmm|PF13405.6 evalue:4e-06 score:25.6 best_domain_score:18.9 name:EF-hand_6;
sp YES;
70774 70842 signal_peptide
ID metaerg.pl|11017
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
71359 72300 CDS
ID metaerg.pl|11018
allgo_ids GO:0005829; GO:0005634; GO:0070635; GO:0070636; GO:0008477; GO:0045437; GO:0034356; GO:0019358; GO:0006152; GO:0046135; GO:0008655;
allko_ids K01239;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953820.1 1 313 evalue:6.0e-167 qcov:100.00 identity:94.20;
kegg_pathway_id 00230; 00760;
kegg_pathway_name Purine metabolism; Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF01156;
pfam_desc Inosine-uridine preferring nucleoside hydrolase;
pfam_id IU_nuc_hydro;
pfam_target db:Pfam-A.hmm|PF01156.19 evalue:9.4e-95 score:316.9 best_domain_score:316.7 name:IU_nuc_hydro;
sprot_desc hypothetical protein;
sprot_id sp|Q9P6J4|YHD6_SCHPO;
sprot_target db:uniprot_sprot|sp|Q9P6J4|YHD6_SCHPO 5 313 evalue:1.9e-95 qcov:98.70 identity:53.70;
72297 73703 CDS
ID metaerg.pl|11019
allec_ids 2.7.7.-;
allgo_ids GO:0005524; GO:0000287; GO:0016779;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953821.1 1 468 evalue:1.5e-246 qcov:100.00 identity:90.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id PHOSLIPSYN2-PWY; PWY4FS-4; PWY-6476; THISYN-PWY; PWY-882; PWY-5354;
metacyc_pathway_name superpathway of phospholipid biosynthesis II (plants);; phosphatidylcholine biosynthesis IV;; cytidylyl molybdenum cofactor biosynthesis;; superpathway of thiamine diphosphate biosynthesis I;; L-ascorbate biosynthesis I (L-galactose pathway);; ;
metacyc_pathway_type Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylcholineBiosynthesis;; Cofactor-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;; Ascorbate-Biosynthesis;; ;
pfam_acc PF02696;
pfam_desc Uncharacterized ACR, YdiU/UPF0061 family;
pfam_id UPF0061;
pfam_target db:Pfam-A.hmm|PF02696.14 evalue:2e-114 score:382.2 best_domain_score:381.8 name:UPF0061;
sprot_desc hypothetical protein;
sprot_id sp|Q164E9|SELO_ROSDO;
sprot_target db:uniprot_sprot|sp|Q164E9|SELO_ROSDO 5 468 evalue:3.4e-157 qcov:99.10 identity:61.80;
74577 73660 CDS
ID metaerg.pl|11020
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953822.1 1 304 evalue:3.9e-147 qcov:99.70 identity:90.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.8e-31 score:108.4 best_domain_score:68.3 name:EamA;
tm_num 10;
74577 73660 transmembrane_helix
ID metaerg.pl|11021
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology i73678-73746o73774-73833i73867-73935o73963-74019i74044-74097o74107-74175i74212-74280o74308-74376i74389-74457o74467-74526i;
75585 74620 CDS
ID metaerg.pl|11022
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia sp003201935;
genomedb_acc GCF_003201935.1;
genomedb_target db:genomedb|GCF_003201935.1|WP_110278599.1 1 321 evalue:1.7e-148 qcov:100.00 identity:76.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF11376;
pfam_desc Protein of unknown function (DUF3179);
pfam_id DUF3179;
pfam_target db:Pfam-A.hmm|PF11376.8 evalue:1.4e-82 score:276.5 best_domain_score:276.1 name:DUF3179;
sp YES;
74620 74673 signal_peptide
ID metaerg.pl|11023
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
76222 75677 CDS
ID metaerg.pl|11024
allec_ids 5.2.1.8;
allgo_ids GO:0000413; GO:0003755; GO:0042597; GO:0006457;
allko_ids K01802;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953823.1 1 181 evalue:6.9e-83 qcov:100.00 identity:86.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00160;
pfam_desc Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;
pfam_id Pro_isomerase;
pfam_target db:Pfam-A.hmm|PF00160.21 evalue:4.3e-42 score:143.3 best_domain_score:143.0 name:Pro_isomerase;
sp YES;
sprot_desc Probable peptidyl-prolyl cis-trans isomerase;
sprot_id sp|Q8YHB5|PPI1_BRUME;
sprot_target db:uniprot_sprot|sp|Q8YHB5|PPI1_BRUME 29 172 evalue:4.1e-42 qcov:79.60 identity:60.30;
75677 75733 signal_peptide
ID metaerg.pl|11025
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
76721 76215 CDS
ID metaerg.pl|11026
allec_ids 5.2.1.8;
allgo_ids GO:0000413; GO:0003755; GO:0042597; GO:0006457;
allko_ids K01802;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953824.1 1 168 evalue:7.3e-87 qcov:100.00 identity:96.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF00160;
pfam_desc Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;
pfam_id Pro_isomerase;
pfam_target db:Pfam-A.hmm|PF00160.21 evalue:6e-42 score:142.8 best_domain_score:142.6 name:Pro_isomerase;
sprot_desc Probable peptidyl-prolyl cis-trans isomerase;
sprot_id sp|Q8YHB5|PPI1_BRUME;
sprot_target db:uniprot_sprot|sp|Q8YHB5|PPI1_BRUME 2 167 evalue:5.0e-50 qcov:98.80 identity:57.90;
76850 78025 CDS
ID metaerg.pl|11027
allec_ids 2.7.2.3;
allgo_ids GO:0004618; GO:0006096; GO:0005737; GO:0005524;
allko_ids K00927;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_026352194.1 1 391 evalue:4.8e-206 qcov:100.00 identity:95.10;
kegg_pathway_id 00010; 00710;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id PHOTOALL-PWY; GLUCONEO-PWY; P124-PWY; P185-PWY; P122-PWY; GLYCOLYSIS-E-D; GLYCOLYSIS; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; P441-PWY; PWY-5464; ANAGLYCOLYSIS-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; P461-PWY; PWY-5484; CALVIN-PWY;
metacyc_pathway_name oxygenic photosynthesis;; gluconeogenesis I;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; heterolactic fermentation;; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis I (from glucose 6-phosphate);; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; superpathway of N-acetylneuraminate degradation;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; Calvin-Benson-Bassham cycle;;
metacyc_pathway_type Photosynthesis; Super-Pathways;; Gluconeogenesis;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;;
pfam_acc PF00162;
pfam_desc Phosphoglycerate kinase;
pfam_id PGK;
pfam_target db:Pfam-A.hmm|PF00162.19 evalue:1.5e-138 score:461.1 best_domain_score:460.9 name:PGK;
sprot_desc Phosphoglycerate kinase;
sprot_id sp|A3PIU6|PGK_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PIU6|PGK_RHOS1 1 390 evalue:9.9e-150 qcov:99.70 identity:71.60;
78156 79751 CDS
ID metaerg.pl|11028
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis;
genomedb_acc GCF_000382265.1;
genomedb_target db:genomedb|GCF_000382265.1|WP_019953827.1 1 531 evalue:1.2e-231 qcov:100.00 identity:77.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
sp YES;
78156 78221 signal_peptide
ID metaerg.pl|11029
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
79861 80799 CDS
ID metaerg.pl|11030
allec_ids 4.1.2.13;
allgo_ids GO:0016829; GO:0005737; GO:0004332; GO:0006096;
allko_ids K01623; K11645;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087207446.1 1 309 evalue:1.2e-159 qcov:99.00 identity:94.20;
kegg_pathway_id 00710; 00010; 00051; 00030;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Fructose and mannose metabolism; Pentose phosphate pathway;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
metacyc_pathway_id P185-PWY; GLUCONEO-PWY; PHOTOALL-PWY; GLYCOLYSIS; PWY-6146; GLYCOLYSIS-E-D; PWY-5464; ANAGLYCOLYSIS-PWY; PWY-1861; GLYCOLYSIS-TCA-GLYOX-BYPASS; P441-PWY; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; P341-PWY; PWY-6142; CALVIN-PWY; PWY-5484; PWY66-373; P461-PWY;
metacyc_pathway_name formaldehyde assimilation III (dihydroxyacetone cycle);; gluconeogenesis I;; oxygenic photosynthesis;; glycolysis I (from glucose 6-phosphate);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of glycolysis and the Entner-Doudoroff pathway;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; formaldehyde assimilation II (assimilatory RuMP Cycle);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; superpathway of N-acetylneuraminate degradation;; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; glycolysis V (Pyrococcus);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; Calvin-Benson-Bassham cycle;; glycolysis II (from fructose 6-phosphate);; sucrose degradation V (sucrose α-glucosidase);; hexitol fermentation to lactate, formate, ethanol and acetate;;
metacyc_pathway_type Formaldehyde-Assimilation;; Gluconeogenesis;; Photosynthesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Formaldehyde-Assimilation;; Energy-Metabolism; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;;
pfam_acc PF01791;
pfam_desc DeoC/LacD family aldolase;
pfam_id DeoC;
pfam_target db:Pfam-A.hmm|PF01791.9 evalue:1e-28 score:99.8 best_domain_score:99.6 name:DeoC;
sprot_desc Probable fructose-bisphosphate aldolase class 1;
sprot_id sp|Q9PKH8|ALF1_CHLMU;
sprot_target db:uniprot_sprot|sp|Q9PKH8|ALF1_CHLMU 21 305 evalue:6.3e-30 qcov:91.30 identity:32.20;
80906 81205 CDS
ID metaerg.pl|11031
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia sediminilitoris;
genomedb_acc GCF_003058085.1;
genomedb_target db:genomedb|GCF_003058085.1|WP_108386996.1 1 99 evalue:5.9e-36 qcov:100.00 identity:84.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
pfam_acc PF04977;
pfam_desc Septum formation initiator;
pfam_id DivIC;
pfam_target db:Pfam-A.hmm|PF04977.15 evalue:2.6e-14 score:52.0 best_domain_score:51.7 name:DivIC;
tm_num 1;
80906 81205 transmembrane_helix
ID metaerg.pl|11032
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 38.9759; 0.00540188; 38.9705; ;
topology i80924-80992o;
>Feature NODE_82_length_81402_cov_9.56609
124 50 tRNA
ID metaerg.pl|11033
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
name tRNA_Glu_ttc;
2653 494 CDS
ID metaerg.pl|11034
allgo_ids GO:0003824; GO:0050660;
allko_ids K00004; K00102;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002378195;
genomedb_acc GCA_002378195.1;
genomedb_target db:genomedb|GCA_002378195.1|DFRJ01000002.1_164 97 719 evalue:2.3e-182 qcov:86.60 identity:51.40;
kegg_pathway_id 00620; 00650;
kegg_pathway_name Pyruvate metabolism; Butanoate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF02913; PF01565;
pfam_desc FAD linked oxidases, C-terminal domain; FAD binding domain;
pfam_id FAD-oxidase_C; FAD_binding_4;
pfam_target db:Pfam-A.hmm|PF02913.19 evalue:4.3e-31 score:107.7 best_domain_score:106.9 name:FAD-oxidase_C; db:Pfam-A.hmm|PF01565.23 evalue:2.9e-24 score:84.6 best_domain_score:83.8 name:FAD_binding_4;
3151 4842 CDS
ID metaerg.pl|11035
allec_ids 3.6.4.12;
allgo_ids GO:0005524; GO:0016887; GO:0003677; GO:0003678; GO:0006310; GO:0006281; GO:0000723;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002378195;
genomedb_acc GCA_002378195.1;
genomedb_target db:genomedb|GCA_002378195.1|DFRJ01000002.1_165 1 558 evalue:5.7e-184 qcov:99.10 identity:58.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF13245; PF13401; PF13604; PF07728; PF14493; PF03266; PF05970; PF01443;
pfam_desc AAA domain; AAA domain; AAA domain; AAA domain (dynein-related subfamily); Helix-turn-helix domain; NTPase; PIF1-like helicase; Viral (Superfamily 1) RNA helicase;
pfam_id AAA_19; AAA_22; AAA_30; AAA_5; HTH_40; NTPase_1; PIF1; Viral_helicase1;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:7.6e-14 score:51.5 best_domain_score:50.0 name:AAA_19; db:Pfam-A.hmm|PF13401.6 evalue:2.1e-07 score:30.6 best_domain_score:29.0 name:AAA_22; db:Pfam-A.hmm|PF13604.6 evalue:4.2e-22 score:78.0 best_domain_score:77.2 name:AAA_30; db:Pfam-A.hmm|PF07728.14 evalue:9.9e-07 score:28.1 best_domain_score:25.7 name:AAA_5; db:Pfam-A.hmm|PF14493.6 evalue:1.4e-12 score:47.1 best_domain_score:45.9 name:HTH_40; db:Pfam-A.hmm|PF03266.15 evalue:2e-05 score:23.8 best_domain_score:16.3 name:NTPase_1; db:Pfam-A.hmm|PF05970.14 evalue:2.1e-37 score:128.4 best_domain_score:111.2 name:PIF1; db:Pfam-A.hmm|PF01443.18 evalue:2.2e-07 score:30.1 best_domain_score:22.7 name:Viral_helicase1;
sprot_desc ATP-dependent DNA helicase pif1;
sprot_id sp|A5WFR0|PIF1_PSYWF;
sprot_target db:uniprot_sprot|sp|A5WFR0|PIF1_PSYWF 1 553 evalue:2.3e-91 qcov:98.20 identity:35.50;
4896 5648 CDS
ID metaerg.pl|11036
allgo_ids GO:0005737; GO:0007049; GO:0051301; GO:0007059; GO:0006260;
allko_ids K05896;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002378195;
genomedb_acc GCA_002378195.1;
genomedb_target db:genomedb|GCA_002378195.1|DFRJ01000002.1_206 11 249 evalue:5.4e-70 qcov:95.60 identity:58.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF02616;
pfam_desc Segregation and condensation protein ScpA;
pfam_id SMC_ScpA;
pfam_target db:Pfam-A.hmm|PF02616.14 evalue:1e-17 score:64.1 best_domain_score:38.9 name:SMC_ScpA;
sprot_desc Segregation and condensation protein A;
sprot_id sp|C0ZC76|SCPA_BREBN;
sprot_target db:uniprot_sprot|sp|C0ZC76|SCPA_BREBN 12 239 evalue:1.1e-21 qcov:91.20 identity:32.90;
5712 6251 CDS
ID metaerg.pl|11037
allgo_ids GO:0051304; GO:0005737; GO:0051301; GO:0006260;
allko_ids K06024;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001781415;
genomedb_acc GCA_001781415.1;
genomedb_target db:genomedb|GCA_001781415.1|OGG69962.1 1 173 evalue:3.4e-42 qcov:96.60 identity:53.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF04079;
pfam_desc Segregation and condensation complex subunit ScpB;
pfam_id SMC_ScpB;
pfam_target db:Pfam-A.hmm|PF04079.16 evalue:1.1e-35 score:121.9 best_domain_score:121.7 name:SMC_ScpB;
sprot_desc Segregation and condensation protein B;
sprot_id sp|A3CPQ6|SCPB_STRSV;
sprot_target db:uniprot_sprot|sp|A3CPQ6|SCPB_STRSV 1 158 evalue:1.6e-17 qcov:88.30 identity:36.00;
6244 7245 CDS
ID metaerg.pl|11038
allec_ids 3.4.16.4;
allgo_ids GO:0006508; GO:0009002; GO:0005576; GO:0004175; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01286; K07258;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002378195;
genomedb_acc GCA_002378195.1;
genomedb_target db:genomedb|GCA_002378195.1|DFRJ01000002.1_204 22 328 evalue:5.7e-67 qcov:92.20 identity:46.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
metacyc_pathway_id PWY-5265; PWY-6471; PEPTIDOGLYCANSYN-PWY;
metacyc_pathway_name peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00768;
pfam_desc D-alanyl-D-alanine carboxypeptidase;
pfam_id Peptidase_S11;
pfam_target db:Pfam-A.hmm|PF00768.20 evalue:3.6e-43 score:147.0 best_domain_score:146.5 name:Peptidase_S11;
sprot_desc D-alanyl-D-alanine carboxypeptidase DacF;
sprot_id sp|P38422|DACF_BACSU;
sprot_target db:uniprot_sprot|sp|P38422|DACF_BACSU 78 333 evalue:2.2e-17 qcov:76.90 identity:30.50;
tm_num 1;
6244 7245 transmembrane_helix
ID metaerg.pl|11039
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology o6310-6378i;
7261 8328 CDS
ID metaerg.pl|11040
allec_ids 2.7.8.13;
allgo_ids GO:0008963; GO:0016021; GO:0005886; GO:0051992; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01000;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002477545;
genomedb_acc GCA_002477545.1;
genomedb_target db:genomedb|GCA_002477545.1|DLQJ01000007.1_38 1 352 evalue:7.9e-131 qcov:99.20 identity:68.20;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
metacyc_pathway_id PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6470; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00953;
pfam_desc Glycosyl transferase family 4;
pfam_id Glycos_transf_4;
pfam_target db:Pfam-A.hmm|PF00953.21 evalue:8.3e-21 score:73.8 best_domain_score:73.8 name:Glycos_transf_4;
sprot_desc Phospho-N-acetylmuramoyl-pentapeptide-transferase;
sprot_id sp|Q2NCZ3|MRAY_ERYLH;
sprot_target db:uniprot_sprot|sp|Q2NCZ3|MRAY_ERYLH 64 347 evalue:2.6e-32 qcov:80.00 identity:34.60;
tm_num 10;
7261 8328 transmembrane_helix
ID metaerg.pl|11041
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology o7288-7356i7459-7527o7570-7638i7672-7731o7774-7842i7861-7920o7930-7989i8008-8067o8095-8163i8263-8322o;
8335 9441 CDS
ID metaerg.pl|11042
allgo_ids GO:0016021; GO:0051301; GO:0032153; GO:0005887; GO:0015648; GO:0009252; GO:0008360; GO:0030435;
allko_ids K03588;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002477545;
genomedb_acc GCA_002477545.1;
genomedb_target db:genomedb|GCA_002477545.1|DLQJ01000007.1_39 5 366 evalue:4.9e-136 qcov:98.40 identity:66.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01098;
pfam_desc Cell cycle protein;
pfam_id FTSW_RODA_SPOVE;
pfam_target db:Pfam-A.hmm|PF01098.19 evalue:1.8e-95 score:319.2 best_domain_score:318.9 name:FTSW_RODA_SPOVE;
sprot_desc Stage V sporulation protein E;
sprot_id sp|P07373|SP5E_BACSU;
sprot_target db:uniprot_sprot|sp|P07373|SP5E_BACSU 5 363 evalue:2.1e-64 qcov:97.60 identity:37.30;
tm_num 10;
8335 9441 transmembrane_helix
ID metaerg.pl|11043
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i8368-8436o8479-8538i8557-8625o8668-8736i8761-8820o8830-8883i8896-8964o9151-9219i9238-9306o9349-9417i;
9410 10576 CDS
ID metaerg.pl|11044
allec_ids 2.4.1.227;
allgo_ids GO:0005975; GO:0016758; GO:0030259; GO:0005886; GO:0051991; GO:0050511; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K02563; K07441; K07432;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001567365;
genomedb_acc GCA_001567365.1;
genomedb_target db:genomedb|GCA_001567365.1|KXK00069.1 18 388 evalue:4.1e-117 qcov:95.60 identity:59.30;
kegg_pathway_id 00550; 01030; 00510;
kegg_pathway_name Peptidoglycan biosynthesis; Glycan structures - biosynthesis 1; N-Glycan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
metacyc_pathway_id PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6470; PWY-6385; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF03033; PF04101; PF00201;
pfam_desc Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; UDP-glucoronosyl and UDP-glucosyl transferase;
pfam_id Glyco_transf_28; Glyco_tran_28_C; UDPGT;
pfam_target db:Pfam-A.hmm|PF03033.20 evalue:1.7e-23 score:82.4 best_domain_score:80.9 name:Glyco_transf_28; db:Pfam-A.hmm|PF04101.16 evalue:2.6e-29 score:101.6 best_domain_score:101.0 name:Glyco_tran_28_C; db:Pfam-A.hmm|PF00201.18 evalue:1.8e-06 score:26.3 best_domain_score:23.5 name:UDPGT;
sprot_desc UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase;
sprot_id sp|Q73L91|MURG_TREDE;
sprot_target db:uniprot_sprot|sp|Q73L91|MURG_TREDE 24 352 evalue:1.8e-42 qcov:84.80 identity:33.80;
10560 11912 CDS
ID metaerg.pl|11045
allec_ids 6.1.1.17;
allgo_ids GO:0004812; GO:0005524; GO:0043039; GO:0005737; GO:0004818; GO:0000049; GO:0008270; GO:0006424;
allko_ids K01885;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__UBA918;s__UBA918 sp001783525;
genomedb_acc GCA_001783525.1;
genomedb_target db:genomedb|GCA_001783525.1|OGG86002.1 7 449 evalue:7.8e-160 qcov:98.40 identity:63.10;
kegg_pathway_id 00970; 00860; 00251;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Porphyrin and chlorophyll metabolism; Glutamate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
metacyc_pathway_id PWY-5918; PWY-5188; TRNA-CHARGING-PWY;
metacyc_pathway_name superpathay of heme b biosynthesis from glutamate;; tetrapyrrole biosynthesis I (from glutamate);; tRNA charging;;
metacyc_pathway_type Heme-b-Biosynthesis; Super-Pathways;; Tetrapyrrole-Biosynthesis;; Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00749;
pfam_desc tRNA synthetases class I (E and Q), catalytic domain;
pfam_id tRNA-synt_1c;
pfam_target db:Pfam-A.hmm|PF00749.21 evalue:5.8e-84 score:280.9 best_domain_score:149.7 name:tRNA-synt_1c;
sprot_desc Glutamate--tRNA ligase;
sprot_id sp|B5YEP5|SYE_DICT6;
sprot_target db:uniprot_sprot|sp|B5YEP5|SYE_DICT6 10 443 evalue:2.8e-79 qcov:96.40 identity:36.60;
tigrfam_acc TIGR00464;
tigrfam_desc glutamate--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name gltX_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00464 evalue:1.6e-126 score:422.1 best_domain_score:292.6 name:TIGR00464;
11914 13254 CDS
ID metaerg.pl|11046
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002299465;
genomedb_acc GCA_002299465.1;
genomedb_target db:genomedb|GCA_002299465.1|DBNX01000014.1_39 9 440 evalue:1.4e-137 qcov:96.90 identity:60.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:1.3e-26 score:91.9 best_domain_score:90.9 name:Peptidase_M23;
sp YES;
tm_num 1;
11914 12009 signal_peptide
ID metaerg.pl|11047
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
11914 13254 transmembrane_helix
ID metaerg.pl|11048
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i11926-11994o;
14126 13794 CDS
ID metaerg.pl|11049
allgo_ids GO:0000049; GO:0017101; GO:0005737; GO:0015031; GO:0006418;
allko_ids K06878;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Micavibrionales;f__Micavibrionaceae;g__UBA1672;s__UBA1672 sp002747015;
genomedb_acc GCA_002747015.1;
genomedb_target db:genomedb|GCA_002747015.1|PCJ96368.1 2 110 evalue:4.7e-34 qcov:99.10 identity:64.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01588;
pfam_desc Putative tRNA binding domain;
pfam_id tRNA_bind;
pfam_target db:Pfam-A.hmm|PF01588.20 evalue:1e-11 score:44.1 best_domain_score:43.9 name:tRNA_bind;
sprot_desc Probable chaperone CsaA;
sprot_id sp|P37584|CSAA_BACSU;
sprot_target db:uniprot_sprot|sp|P37584|CSAA_BACSU 7 109 evalue:2.5e-26 qcov:93.60 identity:58.30;
tigrfam_acc TIGR02222;
tigrfam_desc export-related chaperone protein CsaA;
tigrfam_mainrole Protein fate;
tigrfam_name chap_CsaA;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02222 evalue:3.6e-46 score:154.7 best_domain_score:154.6 name:TIGR02222;
14573 14133 CDS
ID metaerg.pl|11050
allgo_ids GO:0005634;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002477545;
genomedb_acc GCA_002477545.1;
genomedb_target db:genomedb|GCA_002477545.1|DLQJ01000007.1_54 1 146 evalue:1.6e-45 qcov:100.00 identity:62.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01878;
pfam_desc EVE domain;
pfam_id EVE;
pfam_target db:Pfam-A.hmm|PF01878.18 evalue:2.3e-44 score:150.1 best_domain_score:150.0 name:EVE;
sprot_desc hypothetical protein;
sprot_id sp|O94645|YBV3_SCHPO;
sprot_target db:uniprot_sprot|sp|O94645|YBV3_SCHPO 17 146 evalue:9.2e-16 qcov:89.00 identity:34.10;
15061 14642 CDS
ID metaerg.pl|11051
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002378195;
genomedb_acc GCA_002378195.1;
genomedb_target db:genomedb|GCA_002378195.1|DFRJ01000002.1_192 10 139 evalue:8.0e-39 qcov:93.50 identity:67.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
16071 15226 CDS
ID metaerg.pl|11052
allko_ids K00845;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001781415;
genomedb_acc GCA_001781415.1;
genomedb_target db:genomedb|GCA_001781415.1|OGG69975.1 1 280 evalue:2.5e-79 qcov:99.60 identity:54.60;
kegg_pathway_id 00052; 00500; 00521; 00010;
kegg_pathway_name Galactose metabolism; Starch and sucrose metabolism; Streptomycin biosynthesis; Glycolysis / Gluconeogenesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF00480;
pfam_desc ROK family;
pfam_id ROK;
pfam_target db:Pfam-A.hmm|PF00480.20 evalue:9.7e-27 score:93.4 best_domain_score:93.0 name:ROK;
16865 16086 CDS
ID metaerg.pl|11053
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002299465;
genomedb_acc GCA_002299465.1;
genomedb_target db:genomedb|GCA_002299465.1|DBNX01000014.1_52 19 259 evalue:6.8e-92 qcov:93.10 identity:70.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF18306; PF03641;
pfam_desc SLOG cluster4 family; Possible lysine decarboxylase;
pfam_id LDcluster4; Lysine_decarbox;
pfam_target db:Pfam-A.hmm|PF18306.1 evalue:3.2e-18 score:65.0 best_domain_score:64.6 name:LDcluster4; db:Pfam-A.hmm|PF03641.14 evalue:1.7e-32 score:111.5 best_domain_score:111.0 name:Lysine_decarbox;
tigrfam_acc TIGR00730;
tigrfam_desc TIGR00730 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00730;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00730 evalue:1.3e-44 score:151.2 best_domain_score:150.8 name:TIGR00730;
17484 16894 CDS
ID metaerg.pl|11054
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:2.5e-13 score:49.7 best_domain_score:49.4 name:DEDDh;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp003245875;
genomedb_acc GCA_003245875.1;
genomedb_target db:genomedb|GCA_003245875.1|QKBW01000056.1_3 1 196 evalue:7.2e-86 qcov:100.00 identity:74.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF00929;
pfam_desc Exonuclease;
pfam_id RNase_T;
pfam_target db:Pfam-A.hmm|PF00929.24 evalue:8.1e-05 score:22.4 best_domain_score:21.6 name:RNase_T;
18304 17519 CDS
ID metaerg.pl|11055
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG88095.1 1 261 evalue:8.6e-42 qcov:100.00 identity:38.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF03631;
pfam_desc Virulence factor BrkB;
pfam_id Virul_fac_BrkB;
pfam_target db:Pfam-A.hmm|PF03631.15 evalue:1.8e-24 score:86.0 best_domain_score:85.8 name:Virul_fac_BrkB;
tm_num 6;
18304 17519 transmembrane_helix
ID metaerg.pl|11056
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i17579-17647o17786-17854i17915-17983o18011-18079i18113-18181o18224-18292i;
18686 18324 CDS
ID metaerg.pl|11057
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA9973;g__UBA9973;s__UBA9973 sp001787035;
genomedb_acc GCA_001787035.1;
genomedb_target db:genomedb|GCA_001787035.1|OGI86077.1 4 118 evalue:4.7e-11 qcov:95.80 identity:40.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
tm_num 1;
18686 18324 transmembrane_helix
ID metaerg.pl|11058
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i18342-18410o;
18700 19026 CDS
ID metaerg.pl|11059
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02899;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002710785;
genomedb_acc GCA_002710785.1;
genomedb_target db:genomedb|GCA_002710785.1|MAZ29787.1 11 99 evalue:3.4e-29 qcov:82.40 identity:74.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01016;
pfam_desc Ribosomal L27 protein;
pfam_id Ribosomal_L27;
pfam_target db:Pfam-A.hmm|PF01016.19 evalue:7.8e-31 score:105.2 best_domain_score:104.9 name:Ribosomal_L27;
sprot_desc 50S ribosomal protein L27;
sprot_id sp|B1Y281|RL27_LEPCP;
sprot_target db:uniprot_sprot|sp|B1Y281|RL27_LEPCP 11 87 evalue:3.3e-18 qcov:71.30 identity:59.30;
tigrfam_acc TIGR00062;
tigrfam_desc ribosomal protein bL27;
tigrfam_mainrole Protein synthesis;
tigrfam_name L27;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00062 evalue:1.4e-29 score:101.1 best_domain_score:100.8 name:TIGR00062;
19811 19095 CDS
ID metaerg.pl|11060
allgo_ids GO:0000413; GO:0003755;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002477545;
genomedb_acc GCA_002477545.1;
genomedb_target db:genomedb|GCA_002477545.1|DLQJ01000007.1_69 1 232 evalue:9.8e-69 qcov:97.50 identity:57.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF00160;
pfam_desc Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;
pfam_id Pro_isomerase;
pfam_target db:Pfam-A.hmm|PF00160.21 evalue:2.3e-51 score:173.5 best_domain_score:173.1 name:Pro_isomerase;
sp YES;
tm_num 1;
19095 19169 signal_peptide
ID metaerg.pl|11061
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
19811 19095 transmembrane_helix
ID metaerg.pl|11062
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i19113-19172o;
20281 19838 CDS
ID metaerg.pl|11063
allgo_ids GO:0005840; GO:0019843; GO:0003735; GO:0006412;
allko_ids K02939;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001567365;
genomedb_acc GCA_001567365.1;
genomedb_target db:genomedb|GCA_001567365.1|KXK00053.1 1 145 evalue:2.7e-24 qcov:98.60 identity:43.40;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF03948; PF01281;
pfam_desc Ribosomal protein L9, C-terminal domain; Ribosomal protein L9, N-terminal domain;
pfam_id Ribosomal_L9_C; Ribosomal_L9_N;
pfam_target db:Pfam-A.hmm|PF03948.14 evalue:7.4e-14 score:51.2 best_domain_score:50.5 name:Ribosomal_L9_C; db:Pfam-A.hmm|PF01281.19 evalue:2.7e-18 score:64.5 best_domain_score:63.7 name:Ribosomal_L9_N;
sprot_desc 50S ribosomal protein L9;
sprot_id sp|B2IHD4|RL9_BEII9;
sprot_target db:uniprot_sprot|sp|B2IHD4|RL9_BEII9 1 147 evalue:1.1e-13 qcov:100.00 identity:34.70;
tigrfam_acc TIGR00158;
tigrfam_desc ribosomal protein bL9;
tigrfam_mainrole Protein synthesis;
tigrfam_name L9;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00158 evalue:3.5e-29 score:101.3 best_domain_score:101.2 name:TIGR00158;
21662 20349 CDS
ID metaerg.pl|11064
allec_ids 3.4.21.102; 3.4.21.-;
allgo_ids GO:0005515; GO:0005576; GO:0008236;
allko_ids K03797;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002378195;
genomedb_acc GCA_002378195.1;
genomedb_target db:genomedb|GCA_002378195.1|DFRJ01000002.1_181 1 436 evalue:7.4e-139 qcov:99.80 identity:60.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF00595; PF13180; PF17820; PF03572;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Peptidase family S41;
pfam_id PDZ; PDZ_2; PDZ_6; Peptidase_S41;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:1.3e-09 score:37.5 best_domain_score:36.6 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:3.4e-11 score:42.5 best_domain_score:40.9 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:2.6e-12 score:45.6 best_domain_score:44.3 name:PDZ_6; db:Pfam-A.hmm|PF03572.18 evalue:1.8e-43 score:147.2 best_domain_score:146.7 name:Peptidase_S41;
sp YES;
sprot_desc Carboxy-terminal-processing protease;
sprot_id sp|Q44879|CTPA_BARBK;
sprot_target db:uniprot_sprot|sp|Q44879|CTPA_BARBK 97 423 evalue:7.9e-55 qcov:74.80 identity:39.50;
tigrfam_acc TIGR00225;
tigrfam_desc C-terminal processing peptidase;
tigrfam_mainrole Protein fate;
tigrfam_name prc;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00225 evalue:9.8e-91 score:303.4 best_domain_score:303.0 name:TIGR00225;
tm_num 1;
20349 20486 signal_peptide
ID metaerg.pl|11065
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
21662 20349 transmembrane_helix
ID metaerg.pl|11066
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i20406-20474o;
21791 23248 CDS
ID metaerg.pl|11067
allec_ids 6.1.1.16;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0005829; GO:0004817; GO:0008270; GO:0006423;
allko_ids K01883;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001781415;
genomedb_acc GCA_001781415.1;
genomedb_target db:genomedb|GCA_001781415.1|OGG70000.1 1 483 evalue:5.2e-178 qcov:99.60 identity:61.90;
kegg_pathway_id 00272; 00970;
kegg_pathway_name Cysteine metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF01406; PF09334;
pfam_desc tRNA synthetases class I (C) catalytic domain; tRNA synthetases class I (M);
pfam_id tRNA-synt_1e; tRNA-synt_1g;
pfam_target db:Pfam-A.hmm|PF01406.19 evalue:1.6e-92 score:309.3 best_domain_score:308.9 name:tRNA-synt_1e; db:Pfam-A.hmm|PF09334.11 evalue:4.4e-07 score:28.2 best_domain_score:19.6 name:tRNA-synt_1g;
sprot_desc Cysteine--tRNA ligase;
sprot_id sp|B8E391|SYC_DICTD;
sprot_target db:uniprot_sprot|sp|B8E391|SYC_DICTD 17 485 evalue:4.3e-126 qcov:96.70 identity:48.20;
tigrfam_acc TIGR00435;
tigrfam_desc cysteine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name cysS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00435 evalue:1.4e-123 score:412.6 best_domain_score:412.4 name:TIGR00435;
23293 24684 CDS
ID metaerg.pl|11068
allec_ids 3.6.4.12;
allgo_ids GO:0003678; GO:0005524; GO:0006260; GO:0005829; GO:1990077; GO:0003677; GO:0006269; GO:0006268;
allko_ids K02314;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001567365;
genomedb_acc GCA_001567365.1;
genomedb_target db:genomedb|GCA_001567365.1|KXJ99997.1 7 463 evalue:5.0e-210 qcov:98.70 identity:81.10;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF13481; PF00772; PF03796;
pfam_desc AAA domain; DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain;
pfam_id AAA_25; DnaB; DnaB_C;
pfam_target db:Pfam-A.hmm|PF13481.6 evalue:4.1e-10 score:38.8 best_domain_score:38.0 name:AAA_25; db:Pfam-A.hmm|PF00772.21 evalue:5.3e-29 score:99.6 best_domain_score:97.1 name:DnaB; db:Pfam-A.hmm|PF03796.15 evalue:9.4e-101 score:335.7 best_domain_score:335.2 name:DnaB_C;
sprot_desc Replicative DNA helicase;
sprot_id sp|P37469|DNAC_BACSU;
sprot_target db:uniprot_sprot|sp|P37469|DNAC_BACSU 11 450 evalue:7.5e-104 qcov:95.00 identity:45.80;
tigrfam_acc TIGR00665;
tigrfam_desc replicative DNA helicase;
tigrfam_mainrole DNA metabolism;
tigrfam_name DnaB;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00665 evalue:2.3e-156 score:520.1 best_domain_score:520.0 name:TIGR00665;
24945 25307 CDS
ID metaerg.pl|11069
allgo_ids GO:0003677; GO:0046872; GO:0006310; GO:0006281;
allko_ids K06187;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002710785;
genomedb_acc GCA_002710785.1;
genomedb_target db:genomedb|GCA_002710785.1|MAZ29795.1 1 119 evalue:3.0e-34 qcov:99.20 identity:66.40;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
sprot_desc Recombination protein RecR;
sprot_id sp|A8YTF7|RECR_LACH4;
sprot_target db:uniprot_sprot|sp|A8YTF7|RECR_LACH4 6 119 evalue:1.5e-11 qcov:95.00 identity:35.10;
25722 25357 CDS
ID metaerg.pl|11070
allgo_ids GO:0005840; GO:0019843; GO:0003735; GO:0006412;
allko_ids K02888;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__UBA918;s__UBA918 sp002422025;
genomedb_acc GCA_002422025.1;
genomedb_target db:genomedb|GCA_002422025.1|DISV01000005.1_104 14 120 evalue:5.7e-33 qcov:88.40 identity:69.20;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF00829;
pfam_desc Ribosomal prokaryotic L21 protein;
pfam_id Ribosomal_L21p;
pfam_target db:Pfam-A.hmm|PF00829.21 evalue:1.6e-32 score:111.0 best_domain_score:110.8 name:Ribosomal_L21p;
sprot_desc 50S ribosomal protein L21;
sprot_id sp|Q253F6|RL21_CHLFF;
sprot_target db:uniprot_sprot|sp|Q253F6|RL21_CHLFF 19 120 evalue:4.8e-18 qcov:84.30 identity:43.10;
tigrfam_acc TIGR00061;
tigrfam_desc ribosomal protein bL21;
tigrfam_mainrole Protein synthesis;
tigrfam_name L21;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00061 evalue:2.7e-28 score:97.5 best_domain_score:97.3 name:TIGR00061;
26895 25795 CDS
ID metaerg.pl|11071
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp003245875;
genomedb_acc GCA_003245875.1;
genomedb_target db:genomedb|GCA_003245875.1|QKBW01000031.1_5 5 366 evalue:3.4e-129 qcov:98.90 identity:68.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF02646;
pfam_desc RmuC family;
pfam_id RmuC;
pfam_target db:Pfam-A.hmm|PF02646.16 evalue:3.5e-58 score:196.3 best_domain_score:195.1 name:RmuC;
tm_num 1;
26895 25795 transmembrane_helix
ID metaerg.pl|11072
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i25813-25869o;
26997 27449 CDS
ID metaerg.pl|11073
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001781415;
genomedb_acc GCA_001781415.1;
genomedb_target db:genomedb|GCA_001781415.1|OGG69990.1 1 150 evalue:3.5e-48 qcov:100.00 identity:69.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF09424;
pfam_desc Yqey-like protein;
pfam_id YqeY;
pfam_target db:Pfam-A.hmm|PF09424.10 evalue:4.2e-40 score:136.4 best_domain_score:136.2 name:YqeY;
27459 27827 CDS
ID metaerg.pl|11074
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
27903 28298 CDS
ID metaerg.pl|11075
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
28300 28500 CDS
ID metaerg.pl|11076
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
29703 28978 CDS
ID metaerg.pl|11077
allec_ids 5.4.99.25;
allgo_ids GO:0006396; GO:0003723; GO:0106029; GO:0031119;
allko_ids K03177;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__UBA918;s__UBA918 sp002293845;
genomedb_acc GCA_002293845.1;
genomedb_target db:genomedb|GCA_002293845.1|DBEA01000012.1_27 6 228 evalue:2.1e-74 qcov:92.50 identity:64.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF16198; PF01509;
pfam_desc tRNA pseudouridylate synthase B C-terminal domain; TruB family pseudouridylate synthase (N terminal domain);
pfam_id TruB_C_2; TruB_N;
pfam_target db:Pfam-A.hmm|PF16198.5 evalue:1.7e-11 score:43.3 best_domain_score:41.8 name:TruB_C_2; db:Pfam-A.hmm|PF01509.18 evalue:2.4e-31 score:108.4 best_domain_score:108.0 name:TruB_N;
sprot_desc tRNA pseudouridine synthase B;
sprot_id sp|Q6AG41|TRUB_LEIXX;
sprot_target db:uniprot_sprot|sp|Q6AG41|TRUB_LEIXX 9 240 evalue:1.0e-35 qcov:96.30 identity:44.00;
tigrfam_acc TIGR00431;
tigrfam_desc tRNA pseudouridine(55) synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TruB;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00431 evalue:3.7e-50 score:169.7 best_domain_score:169.4 name:TIGR00431;
30660 29713 CDS
ID metaerg.pl|11078
allgo_ids GO:0016021; GO:0055085; GO:0005886; GO:0015297;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002710785;
genomedb_acc GCA_002710785.1;
genomedb_target db:genomedb|GCA_002710785.1|MAZ29806.1 1 315 evalue:1.1e-91 qcov:100.00 identity:59.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01699;
pfam_desc Sodium/calcium exchanger protein;
pfam_id Na_Ca_ex;
pfam_target db:Pfam-A.hmm|PF01699.24 evalue:7.4e-46 score:155.1 best_domain_score:84.5 name:Na_Ca_ex;
sprot_desc Putative antiporter CaxA;
sprot_id sp|Q0ZAI3|CAXA_ALKAM;
sprot_target db:uniprot_sprot|sp|Q0ZAI3|CAXA_ALKAM 11 309 evalue:2.9e-27 qcov:94.90 identity:30.70;
tm_num 10;
30660 29713 transmembrane_helix
ID metaerg.pl|11079
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology o29722-29775i29812-29880o29938-30006i30043-30102o30115-30162i30223-30291o30301-30369i30430-30498o30508-30576i30595-30648o;
30990 32537 CDS
ID metaerg.pl|11080
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__C7867-001;s__C7867-001 sp001781625;
genomedb_acc GCA_001781625.1;
genomedb_target db:genomedb|GCA_001781625.1|OGG71898.1 36 492 evalue:4.7e-100 qcov:88.70 identity:45.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
tm_num 2;
30990 32537 transmembrane_helix
ID metaerg.pl|11081
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology o31002-31061i31065-31133o;
32537 33337 CDS
ID metaerg.pl|11082
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
sp YES;
tm_num 4;
32537 32626 signal_peptide
ID metaerg.pl|11083
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
32537 33337 transmembrane_helix
ID metaerg.pl|11084
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology o32546-32605i32705-32773o32786-32854i32873-32926o;
33715 33419 CDS
ID metaerg.pl|11085
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp003245875;
genomedb_acc GCA_003245875.1;
genomedb_target db:genomedb|GCA_003245875.1|QKBW01000020.1_8 12 89 evalue:2.0e-15 qcov:79.60 identity:52.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
tm_num 2;
33715 33419 transmembrane_helix
ID metaerg.pl|11086
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology o33497-33565i33602-33670o;
34199 33789 CDS
ID metaerg.pl|11087
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__C7867-001;s__C7867-001 sp001189075;
genomedb_acc GCA_001189075.1;
genomedb_target db:genomedb|GCA_001189075.1|KND47230.1 13 133 evalue:6.5e-09 qcov:89.00 identity:36.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
tm_num 3;
34199 33789 transmembrane_helix
ID metaerg.pl|11088
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i33825-33884o33942-34010i34071-34139o;
34544 34293 CDS
ID metaerg.pl|11089
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG87748.1 2 82 evalue:4.1e-06 qcov:97.60 identity:39.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
tm_num 2;
34544 34293 transmembrane_helix
ID metaerg.pl|11090
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology o34335-34403i34461-34529o;
34946 34554 CDS
ID metaerg.pl|11091
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001567365;
genomedb_acc GCA_001567365.1;
genomedb_target db:genomedb|GCA_001567365.1|KXJ97764.1 34 129 evalue:6.8e-16 qcov:73.80 identity:50.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
sp YES;
tm_num 2;
34554 34643 signal_peptide
ID metaerg.pl|11092
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
34946 34554 transmembrane_helix
ID metaerg.pl|11093
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i34734-34802o34860-34928i;
36272 34962 CDS
ID metaerg.pl|11094
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG87750.1 4 436 evalue:4.5e-96 qcov:99.30 identity:44.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01547; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:5.8e-12 score:45.4 best_domain_score:44.7 name:SBP_bac_1; db:Pfam-A.hmm|PF13416.6 evalue:3.3e-13 score:49.3 best_domain_score:48.8 name:SBP_bac_8;
tm_num 1;
36272 34962 transmembrane_helix
ID metaerg.pl|11095
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i34986-35054o;
36834 36277 CDS
ID metaerg.pl|11096
allgo_ids GO:0003723; GO:0006364; GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG87751.1 9 184 evalue:7.9e-58 qcov:95.10 identity:61.90;
kegg_pathway_id 00626; 00450; 00350; 00150; 00380; 00340;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tyrosine metabolism; Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01269; PF08241; PF13649; PF13847; PF01209;
pfam_desc Fibrillarin; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; ubiE/COQ5 methyltransferase family;
pfam_id Fibrillarin; Methyltransf_11; Methyltransf_25; Methyltransf_31; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF01269.17 evalue:4e-05 score:22.1 best_domain_score:21.7 name:Fibrillarin; db:Pfam-A.hmm|PF08241.12 evalue:4.6e-12 score:45.7 best_domain_score:45.2 name:Methyltransf_11; db:Pfam-A.hmm|PF13649.6 evalue:9e-11 score:41.6 best_domain_score:40.9 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.9e-11 score:43.2 best_domain_score:43.0 name:Methyltransf_31; db:Pfam-A.hmm|PF01209.18 evalue:1.5e-08 score:33.5 best_domain_score:33.1 name:Ubie_methyltran;
39419 36945 CDS
ID metaerg.pl|11097
allec_ids 5.6.2.3; 5.99.1.3;
allgo_ids GO:0003677; GO:0003916; GO:0005524; GO:0005694; GO:0006265; GO:0005737; GO:0003918; GO:0006261;
allko_ids K02469;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG87752.1 1 824 evalue:0.0e+00 qcov:100.00 identity:79.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF03989; PF00521;
pfam_desc DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A;
pfam_id DNA_gyraseA_C; DNA_topoisoIV;
pfam_target db:Pfam-A.hmm|PF03989.13 evalue:8e-72 score:235.8 best_domain_score:52.1 name:DNA_gyraseA_C; db:Pfam-A.hmm|PF00521.20 evalue:7e-149 score:495.5 best_domain_score:494.9 name:DNA_topoisoIV;
sprot_desc DNA gyrase subunit A;
sprot_id sp|P0C0R0|GYRA_STAES;
sprot_target db:uniprot_sprot|sp|P0C0R0|GYRA_STAES 15 824 evalue:1.2e-216 qcov:98.30 identity:48.00;
tigrfam_acc TIGR01063;
tigrfam_desc DNA gyrase, A subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name gyrA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01063 evalue:0 score:1039.6 best_domain_score:1039.4 name:TIGR01063;
39944 39471 CDS
ID metaerg.pl|11098
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
tm_num 1;
39944 39471 transmembrane_helix
ID metaerg.pl|11099
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i39528-39587o;
40611 39973 CDS
ID metaerg.pl|11100
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001781415;
genomedb_acc GCA_001781415.1;
genomedb_target db:genomedb|GCA_001781415.1|OGG70937.1 2 212 evalue:8.7e-77 qcov:99.50 identity:67.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF13483;
pfam_desc Beta-lactamase superfamily domain;
pfam_id Lactamase_B_3;
pfam_target db:Pfam-A.hmm|PF13483.6 evalue:7.8e-25 score:86.9 best_domain_score:86.5 name:Lactamase_B_3;
sprot_desc hypothetical protein;
sprot_id sp|Q71Z90|Y1599_LISMF;
sprot_target db:uniprot_sprot|sp|Q71Z90|Y1599_LISMF 7 171 evalue:2.7e-08 qcov:77.80 identity:26.40;
40813 41958 CDS
ID metaerg.pl|11101
allgo_ids GO:0003676; GO:0005840; GO:0003723;
allko_ids K00962; K03049; K03022; K12818;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001781415;
genomedb_acc GCA_001781415.1;
genomedb_target db:genomedb|GCA_001781415.1|OGG70964.1 34 379 evalue:1.5e-156 qcov:90.80 identity:82.70;
kegg_pathway_id 00230; 03020; 00240;
kegg_pathway_name Purine metabolism; RNA polymerase; Pyrimidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF00575;
pfam_desc S1 RNA binding domain;
pfam_id S1;
pfam_target db:Pfam-A.hmm|PF00575.23 evalue:4.8e-43 score:144.6 best_domain_score:64.6 name:S1;
sprot_desc 30S ribosomal protein S1;
sprot_id sp|P50889|RS1_LEULA;
sprot_target db:uniprot_sprot|sp|P50889|RS1_LEULA 17 378 evalue:8.2e-32 qcov:95.00 identity:30.50;
42640 42038 CDS
ID metaerg.pl|11102
allec_ids 3.1.1.29;
allgo_ids GO:0004045; GO:0005737; GO:0006412;
allko_ids K01056;
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__UBA3282;s__UBA3282 sp002492525;
genomedb_acc GCA_002492525.1;
genomedb_target db:genomedb|GCA_002492525.1|DKZA01000039.1_34 1 189 evalue:8.9e-31 qcov:94.50 identity:41.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01195;
pfam_desc Peptidyl-tRNA hydrolase;
pfam_id Pept_tRNA_hydro;
pfam_target db:Pfam-A.hmm|PF01195.19 evalue:3.7e-44 score:149.9 best_domain_score:149.7 name:Pept_tRNA_hydro;
sprot_desc Peptidyl-tRNA hydrolase;
sprot_id sp|Q59989|PTH_SYNY3;
sprot_target db:uniprot_sprot|sp|Q59989|PTH_SYNY3 4 186 evalue:2.7e-26 qcov:91.50 identity:36.60;
tigrfam_acc TIGR00447;
tigrfam_desc aminoacyl-tRNA hydrolase;
tigrfam_mainrole Protein synthesis;
tigrfam_name pth;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00447 evalue:1.5e-42 score:144.6 best_domain_score:144.1 name:TIGR00447;
42775 43419 CDS
ID metaerg.pl|11103
allec_ids 3.4.21.89;
allgo_ids GO:0016021; GO:0005886; GO:0004252; GO:0006465;
allko_ids K03100;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002378195;
genomedb_acc GCA_002378195.1;
genomedb_target db:genomedb|GCA_002378195.1|DFRJ01000003.1_139 22 199 evalue:5.0e-64 qcov:83.20 identity:66.90;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF00717; PF10502;
pfam_desc Peptidase S24-like; Signal peptidase, peptidase S26;
pfam_id Peptidase_S24; Peptidase_S26;
pfam_target db:Pfam-A.hmm|PF00717.23 evalue:1.1e-17 score:63.0 best_domain_score:62.1 name:Peptidase_S24; db:Pfam-A.hmm|PF10502.9 evalue:5.5e-11 score:41.7 best_domain_score:40.0 name:Peptidase_S26;
sprot_desc Probable signal peptidase I-1;
sprot_id sp|P72660|LEP1_SYNY3;
sprot_target db:uniprot_sprot|sp|P72660|LEP1_SYNY3 35 189 evalue:3.9e-23 qcov:72.40 identity:37.00;
tigrfam_acc TIGR02227;
tigrfam_desc signal peptidase I;
tigrfam_mainrole Protein fate;
tigrfam_name sigpep_I_bact;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02227 evalue:2.1e-41 score:140.6 best_domain_score:140.4 name:TIGR02227;
tm_num 1;
42775 43419 transmembrane_helix
ID metaerg.pl|11104
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology o42865-42924i;
43429 44610 CDS
ID metaerg.pl|11105
allec_ids 6.1.1.21;
allgo_ids GO:0005737; GO:0005524; GO:0004821; GO:0006427;
allko_ids K01892;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002477545;
genomedb_acc GCA_002477545.1;
genomedb_target db:genomedb|GCA_002477545.1|DLQJ01000016.1_36 6 391 evalue:5.3e-120 qcov:98.20 identity:57.60;
kegg_pathway_id 00340; 00970;
kegg_pathway_name Histidine metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03129;
pfam_desc Anticodon binding domain;
pfam_id HGTP_anticodon;
pfam_target db:Pfam-A.hmm|PF03129.20 evalue:6e-11 score:41.6 best_domain_score:40.5 name:HGTP_anticodon;
sprot_desc Histidine--tRNA ligase;
sprot_id sp|Q1GAG8|SYH_LACDA;
sprot_target db:uniprot_sprot|sp|Q1GAG8|SYH_LACDA 95 380 evalue:6.7e-21 qcov:72.80 identity:24.90;
44655 44900 CDS
ID metaerg.pl|11106
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002378195;
genomedb_acc GCA_002378195.1;
genomedb_target db:genomedb|GCA_002378195.1|DFRJ01000003.1_137 1 81 evalue:2.3e-22 qcov:100.00 identity:72.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
45377 46555 CDS
ID metaerg.pl|11107
allgo_ids GO:0005515; GO:0051301; GO:0032153; GO:0009898; GO:0043093;
allko_ids K03590;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG87761.1 7 392 evalue:6.4e-150 qcov:98.50 identity:67.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF14450; PF02491;
pfam_desc Cell division protein FtsA; SHS2 domain inserted in FTSA;
pfam_id FtsA; SHS2_FTSA;
pfam_target db:Pfam-A.hmm|PF14450.6 evalue:4.1e-20 score:71.4 best_domain_score:48.8 name:FtsA; db:Pfam-A.hmm|PF02491.20 evalue:2.1e-12 score:46.5 best_domain_score:45.2 name:SHS2_FTSA;
sprot_desc Cell division protein FtsA;
sprot_id sp|Q89AQ4|FTSA_BUCBP;
sprot_target db:uniprot_sprot|sp|Q89AQ4|FTSA_BUCBP 8 363 evalue:2.3e-29 qcov:90.80 identity:27.90;
tigrfam_acc TIGR01174;
tigrfam_desc cell division protein FtsA;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsA;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR01174 evalue:1.6e-68 score:230.6 best_domain_score:183.3 name:TIGR01174;
46694 47962 CDS
ID metaerg.pl|11108
allgo_ids GO:0003924; GO:0032153; GO:0005737; GO:0005525; GO:0000917; GO:0043093; GO:0051258;
allko_ids K03531;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001567365;
genomedb_acc GCA_001567365.1;
genomedb_target db:genomedb|GCA_001567365.1|KXK00625.1 1 422 evalue:5.8e-181 qcov:100.00 identity:81.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF12327; PF00091;
pfam_desc FtsZ family, C-terminal domain; Tubulin/FtsZ family, GTPase domain;
pfam_id FtsZ_C; Tubulin;
pfam_target db:Pfam-A.hmm|PF12327.8 evalue:2.8e-31 score:106.9 best_domain_score:106.4 name:FtsZ_C; db:Pfam-A.hmm|PF00091.25 evalue:4.6e-42 score:143.7 best_domain_score:142.6 name:Tubulin;
sprot_desc Cell division protein FtsZ;
sprot_id sp|P45482|FTSZ_NOSS1;
sprot_target db:uniprot_sprot|sp|P45482|FTSZ_NOSS1 12 334 evalue:3.0e-99 qcov:76.50 identity:56.70;
tigrfam_acc TIGR00065;
tigrfam_desc cell division protein FtsZ;
tigrfam_mainrole Cellular processes;
tigrfam_name ftsZ;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR00065 evalue:3.4e-128 score:427.0 best_domain_score:426.8 name:TIGR00065;
48561 48019 CDS
ID metaerg.pl|11109
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002378195;
genomedb_acc GCA_002378195.1;
genomedb_target db:genomedb|GCA_002378195.1|DFRJ01000003.1_133 3 180 evalue:7.2e-56 qcov:98.90 identity:62.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF14340;
pfam_desc Domain of unknown function (DUF4395);
pfam_id DUF4395;
pfam_target db:Pfam-A.hmm|PF14340.6 evalue:2.1e-27 score:95.3 best_domain_score:95.0 name:DUF4395;
tm_num 4;
48561 48019 transmembrane_helix
ID metaerg.pl|11110
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i48097-48165o48175-48234i48322-48390o48403-48471i;
48825 48574 CDS
ID metaerg.pl|11111
allgo_ids GO:0003677; GO:0006355; GO:0046872;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002299465;
genomedb_acc GCA_002299465.1;
genomedb_target db:genomedb|GCA_002299465.1|DBNX01000001.1_27 7 80 evalue:2.7e-10 qcov:89.20 identity:48.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF02583;
pfam_desc Metal-sensitive transcriptional repressor;
pfam_id Trns_repr_metal;
pfam_target db:Pfam-A.hmm|PF02583.17 evalue:2.8e-15 score:55.7 best_domain_score:55.6 name:Trns_repr_metal;
48908 49834 CDS
ID metaerg.pl|11112
allec_ids 1.6.99.3;
allgo_ids GO:0016491; GO:0055114; GO:0005886; GO:0008785; GO:0009055; GO:0050660; GO:0051287; GO:0003954; GO:0015035; GO:0045454; GO:0000302;
allko_ids K00384; K03388; K00383; K00266; K00382; K00362; K00302; K03387;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__UBA918;s__UBA918 sp002422025;
genomedb_acc GCA_002422025.1;
genomedb_target db:genomedb|GCA_002422025.1|DISV01000004.1_68 3 307 evalue:1.4e-112 qcov:99.00 identity:65.10;
kegg_pathway_id 00260; 00020; 00240; 00280; 00480; 00010; 00790; 00910; 00251; 00252; 00620;
kegg_pathway_name Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle); Pyrimidine metabolism; Valine, leucine and isoleucine degradation; Glutathione metabolism; Glycolysis / Gluconeogenesis; Folate biosynthesis; Nitrogen metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01266; PF00890; PF12831; PF01134; PF03486; PF13434; PF05834; PF13450; PF00070; PF07992; PF13738;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; HI0933-like protein; L-lysine 6-monooxygenase (NADPH-requiring); Lycopene cyclase protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id DAO; FAD_binding_2; FAD_oxidored; GIDA; HI0933_like; K_oxygenase; Lycopene_cycl; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:8.1e-09 score:34.7 best_domain_score:14.9 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:6e-13 score:47.9 best_domain_score:19.0 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:3.1e-07 score:29.3 best_domain_score:25.9 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:7.5e-11 score:41.0 best_domain_score:22.4 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:2.1e-12 score:45.7 best_domain_score:15.4 name:HI0933_like; db:Pfam-A.hmm|PF13434.6 evalue:1.4e-05 score:23.7 best_domain_score:13.9 name:K_oxygenase; db:Pfam-A.hmm|PF05834.12 evalue:3.1e-06 score:25.7 best_domain_score:11.6 name:Lycopene_cycl; db:Pfam-A.hmm|PF13450.6 evalue:1.8e-07 score:30.5 best_domain_score:15.4 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:5e-13 score:48.7 best_domain_score:39.7 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:8.3e-47 score:159.0 best_domain_score:158.8 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:1.2e-28 score:99.5 best_domain_score:89.5 name:Pyr_redox_3;
sprot_desc NADH dehydrogenase;
sprot_id sp|P42974|DHNA_BACSU;
sprot_target db:uniprot_sprot|sp|P42974|DHNA_BACSU 4 297 evalue:9.8e-60 qcov:95.50 identity:39.70;
50893 50108 CDS
ID metaerg.pl|11113
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
sp YES;
tm_num 1;
50108 50227 signal_peptide
ID metaerg.pl|11114
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
50893 50108 transmembrane_helix
ID metaerg.pl|11115
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i50168-50227o;
51788 50994 CDS
ID metaerg.pl|11116
allgo_ids GO:0005216; GO:0006811; GO:0016020; GO:0055085; GO:0005737; GO:0005886; GO:0005891; GO:0008332; GO:0097110; GO:0086056; GO:0086059; GO:0086016; GO:0086027; GO:0070509; GO:0070588; GO:0086002; GO:0007268; GO:0086010; GO:0086045; GO:0086046; GO:0019228; GO:0045956; GO:0060371; GO:0086091; GO:0034765; GO:0042391; GO:0010045; GO:0086015; GO:0086018;
allko_ids K04854;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002299465;
genomedb_acc GCA_002299465.1;
genomedb_target db:genomedb|GCA_002299465.1|DBNX01000011.1_14 1 264 evalue:4.2e-81 qcov:100.00 identity:59.50;
kegg_pathway_id 04020; 04010;
kegg_pathway_name Calcium signaling pathway; MAPK signaling pathway;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF00520; PF08016;
pfam_desc Ion transport protein; Polycystin cation channel;
pfam_id Ion_trans; PKD_channel;
pfam_target db:Pfam-A.hmm|PF00520.31 evalue:4.4e-39 score:133.4 best_domain_score:133.2 name:Ion_trans; db:Pfam-A.hmm|PF08016.12 evalue:3.1e-07 score:28.7 best_domain_score:26.9 name:PKD_channel;
sprot_desc Voltage-dependent T-type calcium channel subunit alpha-1G;
sprot_id sp|O43497|CAC1G_HUMAN;
sprot_target db:uniprot_sprot|sp|O43497|CAC1G_HUMAN 8 222 evalue:7.2e-11 qcov:81.40 identity:25.10;
tm_num 5;
51788 50994 transmembrane_helix
ID metaerg.pl|11117
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology o51036-51104i51123-51191o51234-51302i51363-51431o51579-51647i;
52497 51961 CDS
ID metaerg.pl|11118
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
52972 52900 tRNA
ID metaerg.pl|11119
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
name tRNA_Glu_ctc;
54640 53351 CDS
ID metaerg.pl|11120
allec_ids 6.3.2.10;
allgo_ids GO:0005524; GO:0009058; GO:0016874; GO:0005737; GO:0047480; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01929;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001567365;
genomedb_acc GCA_001567365.1;
genomedb_target db:genomedb|GCA_001567365.1|KXJ97817.1 1 429 evalue:5.4e-142 qcov:100.00 identity:58.30;
kegg_pathway_id 00550; 00300;
kegg_pathway_name Peptidoglycan biosynthesis; Lysine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
metacyc_pathway_id PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-6386; PWY-6470; PWY-6385; PWY-5265; PWY-6387;
metacyc_pathway_name peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;;
pfam_acc PF02875; PF08245;
pfam_desc Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF02875.21 evalue:6.9e-18 score:63.9 best_domain_score:62.0 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:1e-22 score:80.3 best_domain_score:75.7 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;
sprot_id sp|P96613|MURF_BACSU;
sprot_target db:uniprot_sprot|sp|P96613|MURF_BACSU 17 412 evalue:4.9e-33 qcov:92.30 identity:27.00;
56360 54645 CDS
ID metaerg.pl|11121
allec_ids 3.4.16.4;
allgo_ids GO:0008658; GO:0031969; GO:0016021; GO:0009002; GO:0008360;
allko_ids K12556; K08384; K05364; K03587; K08282; K08884;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002299465;
genomedb_acc GCA_002299465.1;
genomedb_target db:genomedb|GCA_002299465.1|DBNX01000028.1_25 1 571 evalue:1.4e-190 qcov:100.00 identity:57.90;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
metacyc_pathway_id PWY-5265; PEPTIDOGLYCANSYN-PWY; PWY-6471;
metacyc_pathway_name peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00905;
pfam_desc Penicillin binding protein transpeptidase domain;
pfam_id Transpeptidase;
pfam_target db:Pfam-A.hmm|PF00905.22 evalue:2e-60 score:203.8 best_domain_score:203.3 name:Transpeptidase;
sprot_desc Peptidoglycan D,D-transpeptidase FtsI homolog;
sprot_id sp|Q9MUV9|FTSIH_MESVI;
sprot_target db:uniprot_sprot|sp|Q9MUV9|FTSIH_MESVI 8 569 evalue:1.5e-37 qcov:98.40 identity:25.70;
tm_num 1;
56360 54645 transmembrane_helix
ID metaerg.pl|11122
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i54663-54731o;
56689 56366 CDS
ID metaerg.pl|11123
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002299465;
genomedb_acc GCA_002299465.1;
genomedb_target db:genomedb|GCA_002299465.1|DBNX01000028.1_24 18 106 evalue:3.7e-07 qcov:83.20 identity:41.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
tm_num 1;
56689 56366 transmembrane_helix
ID metaerg.pl|11124
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i56426-56494o;
57597 56707 CDS
ID metaerg.pl|11125
allec_ids 2.1.1.199;
allgo_ids GO:0008168; GO:0005737; GO:0071424; GO:0070475;
allko_ids K03438;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001567365;
genomedb_acc GCA_001567365.1;
genomedb_target db:genomedb|GCA_001567365.1|KXJ97820.1 1 296 evalue:2.4e-80 qcov:100.00 identity:56.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01795;
pfam_desc MraW methylase family;
pfam_id Methyltransf_5;
pfam_target db:Pfam-A.hmm|PF01795.19 evalue:5.2e-93 score:311.1 best_domain_score:310.3 name:Methyltransf_5;
sprot_desc Ribosomal RNA small subunit methyltransferase H;
sprot_id sp|C6D563|RSMH_PAESJ;
sprot_target db:uniprot_sprot|sp|C6D563|RSMH_PAESJ 2 296 evalue:2.6e-62 qcov:99.70 identity:43.40;
tigrfam_acc TIGR00006;
tigrfam_desc 16S rRNA (cytosine(1402)-N(4))-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00006;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00006 evalue:9.6e-93 score:310.1 best_domain_score:309.4 name:TIGR00006;
58051 57617 CDS
ID metaerg.pl|11126
allgo_ids GO:0005737; GO:0009295; GO:0003677; GO:0003700;
allko_ids K03925;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG88410.1 1 144 evalue:4.5e-69 qcov:100.00 identity:88.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF02381;
pfam_desc MraZ protein, putative antitoxin-like;
pfam_id MraZ;
pfam_target db:Pfam-A.hmm|PF02381.18 evalue:1.5e-34 score:117.0 best_domain_score:69.0 name:MraZ;
sprot_desc Transcriptional regulator MraZ;
sprot_id sp|Q8R9F8|MRAZ_CALS4;
sprot_target db:uniprot_sprot|sp|Q8R9F8|MRAZ_CALS4 1 143 evalue:7.6e-39 qcov:99.30 identity:49.00;
tigrfam_acc TIGR00242;
tigrfam_desc division/cell wall cluster transcriptional repressor MraZ;
tigrfam_mainrole Regulatory functions;
tigrfam_name TIGR00242;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00242 evalue:8.9e-44 score:148.1 best_domain_score:147.9 name:TIGR00242;
59675 58212 CDS
ID metaerg.pl|11127
allec_ids 6.1.1.6;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004824; GO:0000287; GO:0003676; GO:0006430;
allko_ids K04567;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002377025;
genomedb_acc GCA_002377025.1;
genomedb_target db:genomedb|GCA_002377025.1|DFPA01000049.1_6 1 483 evalue:1.4e-199 qcov:99.20 identity:71.20;
kegg_pathway_id 00970; 00300;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Lysine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00152; PF01336;
pfam_desc tRNA synthetases class II (D, K and N) ; OB-fold nucleic acid binding domain;
pfam_id tRNA-synt_2; tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF00152.20 evalue:2.6e-55 score:186.9 best_domain_score:186.6 name:tRNA-synt_2; db:Pfam-A.hmm|PF01336.25 evalue:3.6e-11 score:42.1 best_domain_score:41.2 name:tRNA_anti-codon;
sprot_desc Lysine--tRNA ligase;
sprot_id sp|A5UPG6|SYK_ROSS1;
sprot_target db:uniprot_sprot|sp|A5UPG6|SYK_ROSS1 6 483 evalue:4.6e-96 qcov:98.20 identity:39.40;
60213 59746 CDS
ID metaerg.pl|11128
allgo_ids GO:0003677; GO:0032784; GO:0070063;
allko_ids K03624;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001567365;
genomedb_acc GCA_001567365.1;
genomedb_target db:genomedb|GCA_001567365.1|KXJ97823.1 1 155 evalue:2.2e-61 qcov:100.00 identity:82.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01272; PF03449;
pfam_desc Transcription elongation factor, GreA/GreB, C-term; Transcription elongation factor, N-terminal;
pfam_id GreA_GreB; GreA_GreB_N;
pfam_target db:Pfam-A.hmm|PF01272.19 evalue:1.9e-26 score:91.0 best_domain_score:90.4 name:GreA_GreB; db:Pfam-A.hmm|PF03449.15 evalue:2.5e-26 score:90.9 best_domain_score:90.4 name:GreA_GreB_N;
sprot_desc Transcription elongation factor GreA;
sprot_id sp|Q9KDD7|GREA_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KDD7|GREA_BACHD 3 154 evalue:1.8e-25 qcov:98.10 identity:42.90;
tigrfam_acc TIGR01462;
tigrfam_desc transcription elongation factor GreA;
tigrfam_mainrole Transcription;
tigrfam_name greA;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR01462 evalue:1.4e-50 score:170.4 best_domain_score:170.3 name:TIGR01462;
61982 60273 CDS
ID metaerg.pl|11129
allgo_ids GO:0008658;
allko_ids K03587; K12556; K08384; K05364; K08884;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001781415;
genomedb_acc GCA_001781415.1;
genomedb_target db:genomedb|GCA_001781415.1|OGG70837.1 8 569 evalue:1.7e-212 qcov:98.80 identity:63.20;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF03717; PF00905;
pfam_desc Penicillin-binding Protein dimerisation domain; Penicillin binding protein transpeptidase domain;
pfam_id PBP_dimer; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF03717.15 evalue:1.5e-12 score:47.5 best_domain_score:35.2 name:PBP_dimer; db:Pfam-A.hmm|PF00905.22 evalue:1e-55 score:188.4 best_domain_score:187.9 name:Transpeptidase;
tm_num 1;
61982 60273 transmembrane_helix
ID metaerg.pl|11130
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i60411-60479o;
62220 61975 CDS
ID metaerg.pl|11131
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
tm_num 2;
62220 61975 transmembrane_helix
ID metaerg.pl|11132
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i61987-62055o62113-62181i;
63068 62223 CDS
ID metaerg.pl|11133
allgo_ids GO:0008360;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG89338.1 1 280 evalue:2.1e-54 qcov:99.60 identity:42.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF04085;
pfam_desc rod shape-determining protein MreC;
pfam_id MreC;
pfam_target db:Pfam-A.hmm|PF04085.14 evalue:7.3e-14 score:51.1 best_domain_score:50.0 name:MreC;
64185 63109 CDS
ID metaerg.pl|11134
allgo_ids GO:0000902; GO:0005737; GO:0005524; GO:0008360;
allko_ids K03569;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002477545;
genomedb_acc GCA_002477545.1;
genomedb_target db:genomedb|GCA_002477545.1|DLQJ01000007.1_111 6 358 evalue:8.7e-138 qcov:98.60 identity:71.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF00022; PF14450; PF00012; PF06723;
pfam_desc Actin; Cell division protein FtsA; Hsp70 protein; MreB/Mbl protein;
pfam_id Actin; FtsA; HSP70; MreB_Mbl;
pfam_target db:Pfam-A.hmm|PF00022.19 evalue:1.2e-06 score:26.7 best_domain_score:19.3 name:Actin; db:Pfam-A.hmm|PF14450.6 evalue:2.8e-08 score:33.4 best_domain_score:31.4 name:FtsA; db:Pfam-A.hmm|PF00012.20 evalue:5.6e-13 score:47.2 best_domain_score:42.8 name:HSP70; db:Pfam-A.hmm|PF06723.13 evalue:4.9e-127 score:422.5 best_domain_score:422.3 name:MreB_Mbl;
sprot_desc Cell shape-determining protein MreB;
sprot_id sp|Q01465|MREB_BACSU;
sprot_target db:uniprot_sprot|sp|Q01465|MREB_BACSU 11 338 evalue:2.1e-82 qcov:91.60 identity:49.10;
tigrfam_acc TIGR00904;
tigrfam_desc cell shape determining protein, MreB/Mrl family;
tigrfam_mainrole Cell envelope;
tigrfam_name mreB;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00904 evalue:3.9e-125 score:416.5 best_domain_score:416.3 name:TIGR00904;
65452 64193 CDS
ID metaerg.pl|11135
allec_ids 6.1.1.15;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004827; GO:0006433;
allko_ids K01881;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG89336.1 1 411 evalue:1.2e-191 qcov:98.10 identity:80.30;
kegg_pathway_id 00330; 00970;
kegg_pathway_name Arginine and proline metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03129; PF00587;
pfam_desc Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T);
pfam_id HGTP_anticodon; tRNA-synt_2b;
pfam_target db:Pfam-A.hmm|PF03129.20 evalue:2.7e-16 score:58.7 best_domain_score:57.4 name:HGTP_anticodon; db:Pfam-A.hmm|PF00587.25 evalue:1.9e-32 score:111.9 best_domain_score:111.2 name:tRNA-synt_2b;
sprot_desc Proline--tRNA ligase;
sprot_id sp|Q0C1C5|SYP_HYPNA;
sprot_target db:uniprot_sprot|sp|Q0C1C5|SYP_HYPNA 1 414 evalue:8.9e-80 qcov:98.80 identity:40.50;
tigrfam_acc TIGR00409;
tigrfam_desc proline--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name proS_fam_II;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00409 evalue:9.4e-130 score:433.3 best_domain_score:258.1 name:TIGR00409;
66616 65519 CDS
ID metaerg.pl|11136
allec_ids 3.4.24.-;
allgo_ids GO:0004222; GO:0006508; GO:0016021; GO:0005886; GO:0046872;
allko_ids K11749;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002299465;
genomedb_acc GCA_002299465.1;
genomedb_target db:genomedb|GCA_002299465.1|DBNX01000028.1_14 4 364 evalue:8.7e-101 qcov:98.90 identity:55.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF02163;
pfam_desc Peptidase family M50;
pfam_id Peptidase_M50;
pfam_target db:Pfam-A.hmm|PF02163.22 evalue:1.3e-66 score:223.7 best_domain_score:223.4 name:Peptidase_M50;
sp YES;
sprot_desc Zinc metalloprotease RasP;
sprot_id sp|Q9KA70|RASP_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KA70|RASP_BACHD 4 364 evalue:3.6e-37 qcov:98.90 identity:29.70;
tigrfam_acc TIGR00054;
tigrfam_desc RIP metalloprotease RseP;
tigrfam_mainrole Protein fate;
tigrfam_name TIGR00054;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00054 evalue:1.4e-65 score:221.0 best_domain_score:119.9 name:TIGR00054;
tm_num 4;
65519 65599 signal_peptide
ID metaerg.pl|11137
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
66616 65519 transmembrane_helix
ID metaerg.pl|11138
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
topology i65531-65599o65801-65869i66371-66439o66524-66592i;
67168 66626 CDS
ID metaerg.pl|11139
allgo_ids GO:0005737; GO:0006415;
allko_ids K02838;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001781415;
genomedb_acc GCA_001781415.1;
genomedb_target db:genomedb|GCA_001781415.1|OGG70843.1 1 179 evalue:6.3e-60 qcov:99.40 identity:68.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01765;
pfam_desc Ribosome recycling factor;
pfam_id RRF;
pfam_target db:Pfam-A.hmm|PF01765.19 evalue:3.1e-45 score:153.3 best_domain_score:153.0 name:RRF;
sprot_desc Ribosome-recycling factor;
sprot_id sp|A7INR3|RRF_XANP2;
sprot_target db:uniprot_sprot|sp|A7INR3|RRF_XANP2 3 178 evalue:4.3e-31 qcov:97.80 identity:42.00;
tigrfam_acc TIGR00496;
tigrfam_desc ribosome recycling factor;
tigrfam_mainrole Protein synthesis;
tigrfam_name frr;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00496 evalue:4.8e-48 score:162.2 best_domain_score:162.1 name:TIGR00496;
67804 67211 CDS
ID metaerg.pl|11140
allko_ids K02343; K02340; K02341;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002377025;
genomedb_acc GCA_002377025.1;
genomedb_target db:genomedb|GCA_002377025.1|DFPA01000027.1_4 9 191 evalue:8.5e-18 qcov:92.90 identity:40.50;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF13177;
pfam_desc DNA polymerase III, delta subunit;
pfam_id DNA_pol3_delta2;
pfam_target db:Pfam-A.hmm|PF13177.6 evalue:5.6e-19 score:67.7 best_domain_score:67.1 name:DNA_pol3_delta2;
69724 67853 CDS
ID metaerg.pl|11141
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001781415;
genomedb_acc GCA_001781415.1;
genomedb_target db:genomedb|GCA_001781415.1|OGG70845.1 11 620 evalue:1.4e-50 qcov:97.90 identity:32.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
71297 69798 CDS
ID metaerg.pl|11142
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
74059 71333 CDS
ID metaerg.pl|11143
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001781415;
genomedb_acc GCA_001781415.1;
genomedb_target db:genomedb|GCA_001781415.1|OGG70848.1 6 908 evalue:0.0e+00 qcov:99.40 identity:59.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01935; PF10412;
pfam_desc Helicase HerA, central domain; Type IV secretion-system coupling protein DNA-binding domain;
pfam_id DUF87; TrwB_AAD_bind;
pfam_target db:Pfam-A.hmm|PF01935.17 evalue:4.6e-07 score:29.4 best_domain_score:24.4 name:DUF87; db:Pfam-A.hmm|PF10412.9 evalue:4.9e-06 score:24.9 best_domain_score:15.1 name:TrwB_AAD_bind;
75205 74144 CDS
ID metaerg.pl|11144
allgo_ids GO:0000902; GO:0005737; GO:0005524; GO:0008360;
allko_ids K03569;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG89329.1 17 353 evalue:1.4e-156 qcov:95.50 identity:83.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF00022; PF14450; PF00012; PF06723;
pfam_desc Actin; Cell division protein FtsA; Hsp70 protein; MreB/Mbl protein;
pfam_id Actin; FtsA; HSP70; MreB_Mbl;
pfam_target db:Pfam-A.hmm|PF00022.19 evalue:4e-10 score:38.1 best_domain_score:32.5 name:Actin; db:Pfam-A.hmm|PF14450.6 evalue:1.1e-12 score:47.5 best_domain_score:47.5 name:FtsA; db:Pfam-A.hmm|PF00012.20 evalue:3.3e-10 score:38.0 best_domain_score:34.1 name:HSP70; db:Pfam-A.hmm|PF06723.13 evalue:8.9e-128 score:424.9 best_domain_score:424.7 name:MreB_Mbl;
sprot_desc Cell shape-determining protein MreB;
sprot_id sp|Q01465|MREB_BACSU;
sprot_target db:uniprot_sprot|sp|Q01465|MREB_BACSU 25 346 evalue:1.7e-87 qcov:91.20 identity:50.50;
tigrfam_acc TIGR00904;
tigrfam_desc cell shape determining protein, MreB/Mrl family;
tigrfam_mainrole Cell envelope;
tigrfam_name mreB;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR00904 evalue:1.6e-126 score:421.1 best_domain_score:420.9 name:TIGR00904;
75248 76756 CDS
ID metaerg.pl|11145
allec_ids 2.5.1.7;
allgo_ids GO:0016765; GO:0005737; GO:0008760; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360; GO:0019277;
allko_ids K00619; K01486; K00012; K00891; K00558; K00790; K00517;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001567365;
genomedb_acc GCA_001567365.1;
genomedb_target db:genomedb|GCA_001567365.1|KXJ97840.1 7 501 evalue:2.2e-211 qcov:98.60 identity:74.90;
kegg_pathway_id 00500; 00361; 00230; 00940; 00400; 00626; 00271; 00520; 00530; 00040; 00903; 00220;
kegg_pathway_name Starch and sucrose metabolism; gamma-Hexachlorocyclohexane degradation; Purine metabolism; Phenylpropanoid biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Naphthalene and anthracene degradation; Methionine metabolism; Nucleotide sugars metabolism; Aminosugars metabolism; Pentose and glucuronate interconversions; Limonene and pinene degradation; Urea cycle and metabolism of amino groups;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
metacyc_pathway_id PWY-6470; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6386; PWY-5265; PWY-6385; PWY-6387;
metacyc_pathway_name peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis III (mycobacteria);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;;
pfam_acc PF00275; PF12844; PF01381; PF13560;
pfam_desc EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); Helix-turn-helix domain; Helix-turn-helix; Helix-turn-helix domain;
pfam_id EPSP_synthase; HTH_19; HTH_3; HTH_31;
pfam_target db:Pfam-A.hmm|PF00275.20 evalue:8.3e-38 score:129.4 best_domain_score:129.1 name:EPSP_synthase; db:Pfam-A.hmm|PF12844.7 evalue:5.2e-11 score:41.6 best_domain_score:38.4 name:HTH_19; db:Pfam-A.hmm|PF01381.22 evalue:7.9e-16 score:57.1 best_domain_score:54.8 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:1.3e-10 score:40.7 best_domain_score:39.0 name:HTH_31;
sprot_desc UDP-N-acetylglucosamine 1-carboxyvinyltransferase;
sprot_id sp|Q661E8|MURA_BORBP;
sprot_target db:uniprot_sprot|sp|Q661E8|MURA_BORBP 76 499 evalue:4.0e-42 qcov:84.50 identity:27.30;
76808 78703 CDS
ID metaerg.pl|11146
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG89327.1 1 631 evalue:2.1e-150 qcov:100.00 identity:44.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
78779 79303 CDS
ID metaerg.pl|11147
allec_ids 3.5.1.88;
allgo_ids GO:0046872; GO:0042586; GO:0043686; GO:0031365; GO:0018206; GO:0006412;
allko_ids K01462;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002377025;
genomedb_acc GCA_002377025.1;
genomedb_target db:genomedb|GCA_002377025.1|DFPA01000009.1_2 1 170 evalue:1.4e-59 qcov:97.70 identity:68.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF01327;
pfam_desc Polypeptide deformylase;
pfam_id Pep_deformylase;
pfam_target db:Pfam-A.hmm|PF01327.21 evalue:7.4e-41 score:138.6 best_domain_score:138.3 name:Pep_deformylase;
sprot_desc Peptide deformylase;
sprot_id sp|P73441|DEF_SYNY3;
sprot_target db:uniprot_sprot|sp|P73441|DEF_SYNY3 29 170 evalue:1.0e-21 qcov:81.60 identity:35.20;
tigrfam_acc TIGR00079;
tigrfam_desc peptide deformylase;
tigrfam_mainrole Protein fate;
tigrfam_name pept_deformyl;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00079 evalue:2.7e-36 score:123.7 best_domain_score:123.5 name:TIGR00079;
79351 80223 CDS
ID metaerg.pl|11148
allec_ids 2.1.2.9;
allgo_ids GO:0009058; GO:0016742; GO:0004479;
allko_ids K00604;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002299465;
genomedb_acc GCA_002299465.1;
genomedb_target db:genomedb|GCA_002299465.1|DBNX01000028.1_3 9 288 evalue:7.2e-98 qcov:96.60 identity:62.90;
kegg_pathway_id 00271; 00970; 00670;
kegg_pathway_name Methionine metabolism; Aminoacyl-tRNA biosynthesis; One carbon pool by folate;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF02911; PF00551;
pfam_desc Formyl transferase, C-terminal domain; Formyl transferase;
pfam_id Formyl_trans_C; Formyl_trans_N;
pfam_target db:Pfam-A.hmm|PF02911.18 evalue:0.00014 score:21.2 best_domain_score:19.8 name:Formyl_trans_C; db:Pfam-A.hmm|PF00551.19 evalue:3.3e-26 score:91.4 best_domain_score:91.0 name:Formyl_trans_N;
sprot_desc Methionyl-tRNA formyltransferase;
sprot_id sp|Q9K9Y6|FMT_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K9Y6|FMT_BACHD 11 261 evalue:9.6e-41 qcov:86.60 identity:36.30;
80635 80270 CDS
ID metaerg.pl|11149
allgo_ids GO:0044238;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002477545;
genomedb_acc GCA_002477545.1;
genomedb_target db:genomedb|GCA_002477545.1|DLQJ01000007.1_129 1 120 evalue:4.7e-35 qcov:99.20 identity:62.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF02482;
pfam_desc Sigma 54 modulation protein / S30EA ribosomal protein;
pfam_id Ribosomal_S30AE;
pfam_target db:Pfam-A.hmm|PF02482.19 evalue:2.2e-17 score:62.9 best_domain_score:62.6 name:Ribosomal_S30AE;
tigrfam_acc TIGR00741;
tigrfam_desc ribosomal subunit interface protein;
tigrfam_mainrole Protein synthesis;
tigrfam_name yfiA;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00741 evalue:3e-16 score:58.9 best_domain_score:58.6 name:TIGR00741;
81097 80756 CDS
ID metaerg.pl|11150
allgo_ids GO:0009055; GO:0015035; GO:0045454;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.46881; 16.0849; 0.210776; 23.8731; 0.1086;
pfam_acc PF00462; PF13409; PF13417;
pfam_desc Glutaredoxin; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id Glutaredoxin; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00462.24 evalue:1.2e-07 score:31.1 best_domain_score:30.4 name:Glutaredoxin; db:Pfam-A.hmm|PF13409.6 evalue:7.2e-07 score:28.7 best_domain_score:28.2 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:2.8e-13 score:49.3 best_domain_score:48.9 name:GST_N_3;
>Feature NODE_83_length_81188_cov_46.536
389 3 CDS
ID metaerg.pl|11151
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc calcicola;
genomedb_acc GCF_001904715.1;
genomedb_target db:genomedb|GCF_001904715.1|WP_084177732.1 1 129 evalue:5.2e-32 qcov:100.00 identity:58.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00560; PF12799; PF13516; PF13855;
pfam_desc Leucine Rich Repeat; Leucine Rich repeats (2 copies); Leucine Rich repeat; Leucine rich repeat;
pfam_id LRR_1; LRR_4; LRR_6; LRR_8;
pfam_target db:Pfam-A.hmm|PF00560.33 evalue:2.2e-12 score:45.0 best_domain_score:11.5 name:LRR_1; db:Pfam-A.hmm|PF12799.7 evalue:5.7e-18 score:64.0 best_domain_score:36.9 name:LRR_4; db:Pfam-A.hmm|PF13516.6 evalue:1.5e-10 score:39.5 best_domain_score:12.9 name:LRR_6; db:Pfam-A.hmm|PF13855.6 evalue:1.6e-24 score:84.7 best_domain_score:58.3 name:LRR_8;
1111 617 CDS
ID metaerg.pl|11152
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092546.1 1 164 evalue:5.1e-77 qcov:100.00 identity:93.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00805; PF13576; PF13599;
pfam_desc Pentapeptide repeats (8 copies); Pentapeptide repeats (9 copies); Pentapeptide repeats (9 copies);
pfam_id Pentapeptide; Pentapeptide_3; Pentapeptide_4;
pfam_target db:Pfam-A.hmm|PF00805.22 evalue:1.1e-17 score:62.5 best_domain_score:30.6 name:Pentapeptide; db:Pfam-A.hmm|PF13576.6 evalue:9.1e-13 score:47.4 best_domain_score:27.8 name:Pentapeptide_3; db:Pfam-A.hmm|PF13599.6 evalue:3e-12 score:45.8 best_domain_score:27.0 name:Pentapeptide_4;
sp YES;
617 691 signal_peptide
ID metaerg.pl|11153
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
1283 2419 CDS
ID metaerg.pl|11154
allec_ids 2.1.2.10;
allgo_ids GO:0004047; GO:0008483; GO:0019464;
allko_ids K00282; K00314; K00302; K00605;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196914.1 1 378 evalue:7.2e-199 qcov:100.00 identity:91.30;
kegg_pathway_id 00670; 00260; 00910;
kegg_pathway_name One carbon pool by folate; Glycine, serine and threonine metabolism; Nitrogen metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id GLYCLEAV-PWY;
metacyc_pathway_name glycine cleavage;;
metacyc_pathway_type GLYCINE-DEG;;
pfam_acc PF01571; PF08669; PF04268;
pfam_desc Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; Sarcosine oxidase, gamma subunit family;
pfam_id GCV_T; GCV_T_C; SoxG;
pfam_target db:Pfam-A.hmm|PF01571.21 evalue:2.9e-85 score:284.9 best_domain_score:284.7 name:GCV_T; db:Pfam-A.hmm|PF08669.11 evalue:1e-26 score:91.9 best_domain_score:90.7 name:GCV_T_C; db:Pfam-A.hmm|PF04268.12 evalue:2e-05 score:24.0 best_domain_score:22.6 name:SoxG;
sprot_desc Aminomethyltransferase;
sprot_id sp|Q8YNF7|GCST_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YNF7|GCST_NOSS1 1 375 evalue:1.4e-177 qcov:99.20 identity:80.30;
tigrfam_acc TIGR00528;
tigrfam_desc glycine cleavage system T protein;
tigrfam_mainrole Energy metabolism;
tigrfam_name gcvT;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00528 evalue:1.4e-148 score:493.8 best_domain_score:493.6 name:TIGR00528;
2521 2910 CDS
ID metaerg.pl|11155
allgo_ids GO:0005960; GO:0019464;
allko_ids K02437;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196915.1 1 129 evalue:1.4e-64 qcov:100.00 identity:96.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF01597;
pfam_desc Glycine cleavage H-protein;
pfam_id GCV_H;
pfam_target db:Pfam-A.hmm|PF01597.19 evalue:2.2e-37 score:126.9 best_domain_score:126.8 name:GCV_H;
sprot_desc Glycine cleavage system H protein;
sprot_id sp|Q3M9G2|GCSH_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M9G2|GCSH_ANAVT 2 129 evalue:1.8e-60 qcov:99.20 identity:87.50;
tigrfam_acc TIGR00527;
tigrfam_desc glycine cleavage system H protein;
tigrfam_mainrole Energy metabolism;
tigrfam_name gcvH;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00527 evalue:1.7e-43 score:146.9 best_domain_score:146.8 name:TIGR00527;
3148 6054 CDS
ID metaerg.pl|11156
allec_ids 1.4.4.2;
allgo_ids GO:0006520; GO:0016829; GO:0004375; GO:0019464;
allko_ids K00283; K00281; K00282;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804183.1 15 966 evalue:0.0e+00 qcov:98.30 identity:95.30;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id GLYCLEAV-PWY;
metacyc_pathway_name glycine cleavage;;
metacyc_pathway_type GLYCINE-DEG;;
pfam_acc PF00266; PF01212; PF02347;
pfam_desc Aminotransferase class-V; Beta-eliminating lyase; Glycine cleavage system P-protein;
pfam_id Aminotran_5; Beta_elim_lyase; GDC-P;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:1.5e-09 score:36.6 best_domain_score:23.9 name:Aminotran_5; db:Pfam-A.hmm|PF01212.21 evalue:3e-06 score:25.9 best_domain_score:25.0 name:Beta_elim_lyase; db:Pfam-A.hmm|PF02347.16 evalue:1.3e-205 score:682.5 best_domain_score:645.5 name:GDC-P;
sprot_desc Glycine dehydrogenase (decarboxylating);
sprot_id sp|B2J427|GCSP_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J427|GCSP_NOSP7 1 968 evalue:0.0e+00 qcov:100.00 identity:84.80;
tigrfam_acc TIGR00461;
tigrfam_desc glycine dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name gcvP;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00461 evalue:0 score:1648.0 best_domain_score:1647.9 name:TIGR00461;
7046 6174 CDS
ID metaerg.pl|11157
allec_ids 4.-.-.-;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0050662; GO:0016829;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094025.1 1 290 evalue:1.9e-154 qcov:100.00 identity:91.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id PWY1A0-6325;
metacyc_pathway_name actinorhodin biosynthesis;;
metacyc_pathway_type Antibiotic-Biosynthesis;;
pfam_acc PF01073; PF01370; PF16363; PF02719; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:1.3e-05 score:23.6 best_domain_score:22.0 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:2.4e-21 score:75.5 best_domain_score:75.2 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:1.1e-13 score:50.6 best_domain_score:48.7 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF02719.15 evalue:5.9e-08 score:31.4 best_domain_score:24.8 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:2e-50 score:170.7 best_domain_score:170.6 name:RmlD_sub_bind;
sp YES;
sprot_desc Uncharacterized UDP-glucose epimerase YtcB;
sprot_id sp|O34886|YTCB_BACSU;
sprot_target db:uniprot_sprot|sp|O34886|YTCB_BACSU 3 270 evalue:7.7e-06 qcov:92.40 identity:26.70;
6174 6236 signal_peptide
ID metaerg.pl|11158
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
7818 7075 CDS
ID metaerg.pl|11159
allgo_ids GO:0005515;
allko_ids K09571; K01768; K09574; K04460; K01090; K01802; K09667; K08884; K03040; K05864;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092550.1 1 247 evalue:1.6e-122 qcov:100.00 identity:89.10;
kegg_pathway_id 00230; 04020; 03020; 05012; 01030; 04010;
kegg_pathway_name Purine metabolism; Calcium signaling pathway; RNA polymerase; Parkinson's disease; Glycan structures - biosynthesis 1; MAPK signaling pathway;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF12895; PF06552; PF00515; PF13374; PF13414; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF13174; PF13176; PF13181; PF13371;
pfam_desc Anaphase-promoting complex, cyclosome, subunit 3; Plant specific mitochondrial import receptor subunit TOM20; Tetratricopeptide repeat; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id ANAPC3; TOM20_plant; TPR_1; TPR_10; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_6; TPR_7; TPR_8; TPR_9;
pfam_target db:Pfam-A.hmm|PF12895.7 evalue:2.7e-11 score:42.8 best_domain_score:28.4 name:ANAPC3; db:Pfam-A.hmm|PF06552.12 evalue:5.8e-08 score:31.9 best_domain_score:14.5 name:TOM20_plant; db:Pfam-A.hmm|PF00515.28 evalue:8.9e-45 score:148.0 best_domain_score:37.1 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:1.4e-09 score:36.8 best_domain_score:11.8 name:TPR_10; db:Pfam-A.hmm|PF13414.6 evalue:1.1e-34 score:117.0 best_domain_score:42.5 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:2.9e-18 score:65.1 best_domain_score:29.2 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:8.9e-16 score:56.5 best_domain_score:19.1 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:7.2e-24 score:83.4 best_domain_score:42.6 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:1.2e-18 score:65.4 best_domain_score:23.9 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:1.2e-12 score:47.4 best_domain_score:32.5 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:3.8e-38 score:125.8 best_domain_score:32.6 name:TPR_2; db:Pfam-A.hmm|PF13174.6 evalue:1.7e-12 score:46.3 best_domain_score:14.7 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:5.2e-12 score:44.2 best_domain_score:16.8 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:5.8e-29 score:97.1 best_domain_score:24.0 name:TPR_8; db:Pfam-A.hmm|PF13371.6 evalue:5.5e-19 score:67.3 best_domain_score:32.5 name:TPR_9;
sp YES;
7075 7131 lipoprotein_signal_peptide
ID metaerg.pl|11160
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
8251 9588 CDS
ID metaerg.pl|11161
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196920.1 3 445 evalue:3.6e-226 qcov:99.60 identity:91.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00805;
pfam_desc Pentapeptide repeats (8 copies);
pfam_id Pentapeptide;
pfam_target db:Pfam-A.hmm|PF00805.22 evalue:1.3e-11 score:43.1 best_domain_score:33.7 name:Pentapeptide;
tm_num 4;
8251 9588 transmembrane_helix
ID metaerg.pl|11162
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i8476-8529o8539-8607i8644-8712o8764-8832i;
10508 9747 CDS
ID metaerg.pl|11163
allec_ids 3.4.11.18;
allgo_ids GO:0046872; GO:0070006; GO:0070084;
allko_ids K01265;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092552.1 1 253 evalue:2.7e-141 qcov:100.00 identity:98.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00557;
pfam_desc Metallopeptidase family M24;
pfam_id Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF00557.24 evalue:3e-56 score:189.7 best_domain_score:189.5 name:Peptidase_M24;
sprot_desc Methionine aminopeptidase A;
sprot_id sp|P53579|MAP11_SYNY3;
sprot_target db:uniprot_sprot|sp|P53579|MAP11_SYNY3 4 252 evalue:1.3e-110 qcov:98.40 identity:75.50;
tigrfam_acc TIGR00500;
tigrfam_desc methionine aminopeptidase, type I;
tigrfam_mainrole Protein fate;
tigrfam_name met_pdase_I;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00500 evalue:8e-104 score:345.7 best_domain_score:345.5 name:TIGR00500;
11551 10505 CDS
ID metaerg.pl|11164
allgo_ids GO:0016491;
allko_ids K13016; K00078;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092553.1 1 343 evalue:3.8e-178 qcov:98.60 identity:90.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF01408; PF03447;
pfam_desc Oxidoreductase family, NAD-binding Rossmann fold; Homoserine dehydrogenase, NAD binding domain;
pfam_id GFO_IDH_MocA; NAD_binding_3;
pfam_target db:Pfam-A.hmm|PF01408.22 evalue:9.9e-26 score:90.2 best_domain_score:89.5 name:GFO_IDH_MocA; db:Pfam-A.hmm|PF03447.16 evalue:7.1e-07 score:29.1 best_domain_score:28.4 name:NAD_binding_3;
11902 12201 CDS
ID metaerg.pl|11165
allgo_ids GO:0009055; GO:0051536; GO:0051537; GO:0046872;
allko_ids K00529; K00366;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092554.1 1 99 evalue:1.5e-47 qcov:100.00 identity:92.90;
kegg_pathway_id 00910; 00360; 00071;
kegg_pathway_name Nitrogen metabolism; Phenylalanine metabolism; Fatty acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00111;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain;
pfam_id Fer2;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:6.5e-21 score:73.3 best_domain_score:73.0 name:Fer2;
sprot_desc Ferredoxin;
sprot_id sp|P00247|FER_CHLFR;
sprot_target db:uniprot_sprot|sp|P00247|FER_CHLFR 1 99 evalue:3.6e-48 qcov:100.00 identity:90.90;
tigrfam_acc TIGR02008;
tigrfam_desc ferredoxin [2Fe-2S];
tigrfam_name fdx_plant;
tigrfam_target db:TIGRFAMs.hmm|TIGR02008 evalue:1.2e-52 score:174.8 best_domain_score:174.7 name:TIGR02008;
13969 12371 CDS
ID metaerg.pl|11166
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092555.1 1 532 evalue:4.6e-284 qcov:100.00 identity:91.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF08486;
pfam_desc Stage II sporulation protein;
pfam_id SpoIID;
pfam_target db:Pfam-A.hmm|PF08486.10 evalue:3e-26 score:91.1 best_domain_score:89.6 name:SpoIID;
sp YES;
tigrfam_acc TIGR02669;
tigrfam_desc SpoIID/LytB domain;
tigrfam_mainrole Unknown function;
tigrfam_name SpoIID_LytB;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR02669 evalue:1.3e-78 score:263.8 best_domain_score:263.2 name:TIGR02669;
tm_num 1;
12371 12457 signal_peptide
ID metaerg.pl|11167
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
13969 12371 transmembrane_helix
ID metaerg.pl|11168
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i12389-12457o;
14244 14816 CDS
ID metaerg.pl|11169
allec_ids 3.4.21.89;
allgo_ids GO:0016021; GO:0005886; GO:0004252; GO:0006465;
allko_ids K03100;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092556.1 1 190 evalue:1.3e-103 qcov:100.00 identity:95.30;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00717; PF10502;
pfam_desc Peptidase S24-like; Signal peptidase, peptidase S26;
pfam_id Peptidase_S24; Peptidase_S26;
pfam_target db:Pfam-A.hmm|PF00717.23 evalue:5.8e-17 score:60.7 best_domain_score:59.9 name:Peptidase_S24; db:Pfam-A.hmm|PF10502.9 evalue:5e-17 score:61.2 best_domain_score:60.7 name:Peptidase_S26;
sprot_desc Probable signal peptidase I-1;
sprot_id sp|P72660|LEP1_SYNY3;
sprot_target db:uniprot_sprot|sp|P72660|LEP1_SYNY3 18 188 evalue:4.6e-60 qcov:90.00 identity:64.30;
tigrfam_acc TIGR02227;
tigrfam_desc signal peptidase I;
tigrfam_mainrole Protein fate;
tigrfam_name sigpep_I_bact;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02227 evalue:5.5e-46 score:155.5 best_domain_score:155.3 name:TIGR02227;
tm_num 1;
14244 14816 transmembrane_helix
ID metaerg.pl|11170
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i14304-14372o;
15408 14878 CDS
ID metaerg.pl|11171
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196926.1 1 176 evalue:2.8e-89 qcov:100.00 identity:94.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF12836;
pfam_desc Helix-hairpin-helix motif;
pfam_id HHH_3;
pfam_target db:Pfam-A.hmm|PF12836.7 evalue:5.2e-14 score:51.5 best_domain_score:30.5 name:HHH_3;
15806 15423 CDS
ID metaerg.pl|11172
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196927.1 4 127 evalue:4.9e-59 qcov:97.60 identity:96.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF09851; PF05154;
pfam_desc Short C-terminal domain; TM2 domain;
pfam_id SHOCT; TM2;
pfam_target db:Pfam-A.hmm|PF09851.9 evalue:1.2e-07 score:30.5 best_domain_score:29.9 name:SHOCT; db:Pfam-A.hmm|PF05154.16 evalue:5.3e-10 score:38.7 best_domain_score:38.2 name:TM2;
tm_num 1;
15806 15423 transmembrane_helix
ID metaerg.pl|11173
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i15459-15527o;
16651 16166 CDS
ID metaerg.pl|11174
allgo_ids GO:0016747;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp000316645;
genomedb_acc GCF_000316645.1;
genomedb_target db:genomedb|GCF_000316645.1|WP_015138686.1 7 158 evalue:1.1e-63 qcov:94.40 identity:74.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00583; PF13673; PF13302; PF13508; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_3; Acetyltransf_7; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:8.9e-12 score:44.5 best_domain_score:44.3 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:7.6e-07 score:28.3 best_domain_score:28.0 name:Acetyltransf_10; db:Pfam-A.hmm|PF13302.7 evalue:3.1e-07 score:30.4 best_domain_score:30.2 name:Acetyltransf_3; db:Pfam-A.hmm|PF13508.7 evalue:4.5e-08 score:32.6 best_domain_score:32.2 name:Acetyltransf_7; db:Pfam-A.hmm|PF08445.10 evalue:2.9e-05 score:23.2 best_domain_score:22.5 name:FR47;
18530 16743 CDS
ID metaerg.pl|11175
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K04372; K04443; K07675; K02178; K04688; K02486; K13303; K05688; K13304; K01768; K08286; K08809; K04373; K08792; K05098; K05097; K05096; K02480; K04445; K08790; K04444; K08282; K07673; K11265; K07682; K13302; K03407; K04442; K11623; K07683; K07778; K08810; K08884;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092557.1 1 595 evalue:0.0e+00 qcov:100.00 identity:92.10;
kegg_pathway_id 00230; 04510; 04111; 04110; 05012; 04150; 02020; 04010;
kegg_pathway_name Purine metabolism; Focal adhesion; Cell cycle - yeast; Cell cycle; Parkinson's disease; mTOR signaling pathway; Two-component system - General; MAPK signaling pathway;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF01636; PF03781; PF00069; PF07714;
pfam_desc Phosphotransferase enzyme family; Sulfatase-modifying factor enzyme 1; Protein kinase domain; Protein tyrosine kinase;
pfam_id APH; FGE-sulfatase; Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:5e-07 score:29.1 best_domain_score:17.3 name:APH; db:Pfam-A.hmm|PF03781.16 evalue:2.2e-58 score:197.1 best_domain_score:196.6 name:FGE-sulfatase; db:Pfam-A.hmm|PF00069.25 evalue:1.8e-33 score:115.2 best_domain_score:114.8 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:1.5e-14 score:53.2 best_domain_score:52.7 name:Pkinase_Tyr;
19668 18871 CDS
ID metaerg.pl|11176
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K02053; K02011; K11074;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092558.1 25 265 evalue:5.1e-119 qcov:90.90 identity:95.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.2e-21 score:74.7 best_domain_score:71.4 name:BPD_transp_1;
sprot_desc Putrescine transport system permease protein PotI;
sprot_id sp|P0AFL2|POTI_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AFL2|POTI_ECOL6 10 265 evalue:1.6e-50 qcov:96.60 identity:43.30;
tm_num 6;
19668 18871 transmembrane_helix
ID metaerg.pl|11177
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i18907-18975o19081-19149i19186-19254o19267-19335i19417-19476o19585-19653i;
20195 21283 CDS
ID metaerg.pl|11178
allec_ids 2.4.-.-;
allgo_ids GO:0016757;
allko_ids K00712; K00749; K13677; K03867; K13668; K00703; K03844; K02844;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196931.1 1 362 evalue:4.3e-193 qcov:100.00 identity:91.70;
kegg_pathway_id 01031; 01030; 00510; 00500; 00540;
kegg_pathway_name Glycan structures - biosynthesis 2; Glycan structures - biosynthesis 1; N-Glycan biosynthesis; Starch and sucrose metabolism; Lipopolysaccharide biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id LPSSYN-PWY; LIPA-CORESYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF00534; PF13439; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:9.8e-24 score:83.0 best_domain_score:82.4 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:4e-15 score:55.5 best_domain_score:53.7 name:Glyco_transf_4; db:Pfam-A.hmm|PF13692.6 evalue:5.7e-17 score:61.6 best_domain_score:60.9 name:Glyco_trans_1_4;
sprot_desc Uncharacterized glycosyltransferase MJ1607;
sprot_id sp|Q59002|Y1607_METJA;
sprot_target db:uniprot_sprot|sp|Q59002|Y1607_METJA 5 321 evalue:3.0e-15 qcov:87.60 identity:25.40;
21761 21372 CDS
ID metaerg.pl|11179
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196932.1 1 129 evalue:1.0e-59 qcov:100.00 identity:89.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF07386;
pfam_desc Protein of unknown function (DUF1499);
pfam_id DUF1499;
pfam_target db:Pfam-A.hmm|PF07386.11 evalue:3.8e-39 score:133.1 best_domain_score:132.9 name:DUF1499;
22101 21835 CDS
ID metaerg.pl|11180
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092576.1 1 88 evalue:9.9e-43 qcov:100.00 identity:93.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF11341;
pfam_desc Protein of unknown function (DUF3143);
pfam_id DUF3143;
pfam_target db:Pfam-A.hmm|PF11341.8 evalue:2.2e-34 score:116.8 best_domain_score:116.5 name:DUF3143;
22658 22122 CDS
ID metaerg.pl|11181
allko_ids K00428;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196934.1 1 178 evalue:2.0e-90 qcov:100.00 identity:96.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00226;
pfam_desc DnaJ domain;
pfam_id DnaJ;
pfam_target db:Pfam-A.hmm|PF00226.31 evalue:8.4e-20 score:69.9 best_domain_score:69.3 name:DnaJ;
tm_num 1;
22658 22122 transmembrane_helix
ID metaerg.pl|11182
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i22491-22559o;
23567 22800 CDS
ID metaerg.pl|11183
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF14771;
pfam_desc Domain of unknown function (DUF4476);
pfam_id DUF4476;
pfam_target db:Pfam-A.hmm|PF14771.6 evalue:1.3e-18 score:66.3 best_domain_score:65.7 name:DUF4476;
sp YES;
22800 22967 signal_peptide
ID metaerg.pl|11184
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
25327 23630 CDS
ID metaerg.pl|11185
allgo_ids GO:0008643; GO:0015288; GO:0016021;
allko_ids K01448;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus variabilis;
genomedb_acc GCF_000204075.1;
genomedb_target db:genomedb|GCF_000204075.1|WP_011316532.1 1 565 evalue:4.7e-263 qcov:100.00 identity:81.90;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF04966; PF00395;
pfam_desc Carbohydrate-selective porin, OprB family; S-layer homology domain;
pfam_id OprB; SLH;
pfam_target db:Pfam-A.hmm|PF04966.12 evalue:6.3e-79 score:265.3 best_domain_score:264.9 name:OprB; db:Pfam-A.hmm|PF00395.20 evalue:4.9e-10 score:38.5 best_domain_score:37.3 name:SLH;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|Q8YNL5|Y4550_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YNL5|Y4550_NOSS1 11 565 evalue:3.1e-112 qcov:98.20 identity:46.60;
23630 23698 signal_peptide
ID metaerg.pl|11186
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
25558 28845 CDS
ID metaerg.pl|11187
allgo_ids GO:0004571; GO:0005509; GO:0016020;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Chlorogloeopsis;s__Chlorogloeopsis sp000332255;
genomedb_acc GCF_000332255.1;
genomedb_target db:genomedb|GCF_000332255.1|WP_026101819.1 25 1086 evalue:0.0e+00 qcov:97.00 identity:63.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF13575; PF01532; PF05147;
pfam_desc Domain of unknown function (DUF4135); Glycosyl hydrolase family 47; Lanthionine synthetase C-like protein;
pfam_id DUF4135; Glyco_hydro_47; LANC_like;
pfam_target db:Pfam-A.hmm|PF13575.6 evalue:7.1e-132 score:439.5 best_domain_score:439.1 name:DUF4135; db:Pfam-A.hmm|PF01532.20 evalue:7e-06 score:24.4 best_domain_score:12.4 name:Glyco_hydro_47; db:Pfam-A.hmm|PF05147.13 evalue:9.5e-78 score:260.5 best_domain_score:260.0 name:LANC_like;
tigrfam_acc TIGR03897;
tigrfam_desc type 2 lantibiotic biosynthesis protein LanM;
tigrfam_mainrole Cellular processes;
tigrfam_name lanti_2_LanM;
tigrfam_sub1role Toxin production and resistance;
tigrfam_target db:TIGRFAMs.hmm|TIGR03897 evalue:0 score:1081.9 best_domain_score:1081.7 name:TIGR03897;
28851 30995 CDS
ID metaerg.pl|11188
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0030256; GO:0016887; GO:0008233; GO:0044179; GO:0030253;
allko_ids K02010; K02006; K02071; K06861; K01996; K02045; K01995; K10111;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp000316645;
genomedb_acc GCF_000316645.1;
genomedb_target db:genomedb|GCF_000316645.1|WP_015136861.1 1 712 evalue:0.0e+00 qcov:99.70 identity:83.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00664; PF00005; PF03412;
pfam_desc ABC transporter transmembrane region; ABC transporter; Peptidase C39 family;
pfam_id ABC_membrane; ABC_tran; Peptidase_C39;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:4.5e-31 score:107.7 best_domain_score:107.2 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:3.9e-33 score:114.1 best_domain_score:113.3 name:ABC_tran; db:Pfam-A.hmm|PF03412.15 evalue:5.5e-33 score:112.8 best_domain_score:112.1 name:Peptidase_C39;
sprot_desc Alpha-hemolysin translocation ATP-binding protein HlyB;
sprot_id sp|P11599|HLYB_PROVU;
sprot_target db:uniprot_sprot|sp|P11599|HLYB_PROVU 9 705 evalue:3.3e-82 qcov:97.60 identity:29.70;
tm_num 5;
28851 30995 transmembrane_helix
ID metaerg.pl|11189
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i29346-29414o29442-29510i29667-29735o29748-29816i30012-30080o;
31406 31627 CDS
ID metaerg.pl|11190
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp000316645;
genomedb_acc GCF_000316645.1;
genomedb_target db:genomedb|GCF_000316645.1|WP_015136862.1 3 67 evalue:4.4e-20 qcov:89.00 identity:76.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
tigrfam_acc TIGR03898;
tigrfam_desc type 2 lantibiotic, mersacidin/lichenicidin family;
tigrfam_mainrole Cellular processes;
tigrfam_name lanti_MRSA_kill;
tigrfam_sub1role Toxin production and resistance;
tigrfam_target db:TIGRFAMs.hmm|TIGR03898 evalue:1.9e-21 score:74.9 best_domain_score:74.6 name:TIGR03898;
31697 33190 CDS
ID metaerg.pl|11191
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Fischerella;s__Fischerella thermalis;
genomedb_acc GCF_000317225.1;
genomedb_target db:genomedb|GCF_000317225.1|WP_009454933.1 8 497 evalue:1.4e-173 qcov:98.60 identity:68.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF13533; PF13437;
pfam_desc Biotin-lipoyl like; HlyD family secretion protein;
pfam_id Biotin_lipoyl_2; HlyD_3;
pfam_target db:Pfam-A.hmm|PF13533.6 evalue:2.7e-12 score:45.5 best_domain_score:45.5 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:7.2e-15 score:54.8 best_domain_score:43.3 name:HlyD_3;
tm_num 1;
31697 33190 transmembrane_helix
ID metaerg.pl|11192
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology o31763-31831i;
34268 33276 CDS
ID metaerg.pl|11193
allgo_ids GO:0005829; GO:0051087; GO:0051082; GO:0051085; GO:0006260;
allko_ids K09510; K00428; K00122; K05516;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092519.1 1 329 evalue:3.9e-177 qcov:99.70 identity:94.50;
kegg_pathway_id 00680; 00630;
kegg_pathway_name Methane metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00226; PF01556;
pfam_desc DnaJ domain; DnaJ C terminal domain;
pfam_id DnaJ; DnaJ_C;
pfam_target db:Pfam-A.hmm|PF00226.31 evalue:1.2e-27 score:95.0 best_domain_score:94.2 name:DnaJ; db:Pfam-A.hmm|PF01556.18 evalue:8.9e-31 score:106.2 best_domain_score:105.7 name:DnaJ_C;
sprot_desc Chaperone protein DnaJ 2;
sprot_id sp|P73097|DNAJ2_SYNY3;
sprot_target db:uniprot_sprot|sp|P73097|DNAJ2_SYNY3 4 325 evalue:8.0e-84 qcov:97.60 identity:52.50;
36423 34345 CDS
ID metaerg.pl|11194
allgo_ids GO:0005975; GO:0016773; GO:0005524; GO:0051082; GO:0006457;
allko_ids K04043;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092520.1 1 692 evalue:0.0e+00 qcov:100.00 identity:97.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF02782; PF00012; PF06723;
pfam_desc FGGY family of carbohydrate kinases, C-terminal domain; Hsp70 protein; MreB/Mbl protein;
pfam_id FGGY_C; HSP70; MreB_Mbl;
pfam_target db:Pfam-A.hmm|PF02782.16 evalue:1.6e-06 score:27.2 best_domain_score:26.1 name:FGGY_C; db:Pfam-A.hmm|PF00012.20 evalue:5.2e-241 score:800.3 best_domain_score:800.0 name:HSP70; db:Pfam-A.hmm|PF06723.13 evalue:3.5e-17 score:61.4 best_domain_score:52.1 name:MreB_Mbl;
sprot_desc Chaperone protein dnaK1;
sprot_id sp|Q9ZEJ6|DNAK1_NOSS1;
sprot_target db:uniprot_sprot|sp|Q9ZEJ6|DNAK1_NOSS1 1 629 evalue:0.0e+00 qcov:90.90 identity:90.00;
tigrfam_acc TIGR02350;
tigrfam_desc chaperone protein DnaK;
tigrfam_mainrole Protein fate;
tigrfam_name prok_dnaK;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR02350 evalue:7.6e-274 score:908.7 best_domain_score:908.5 name:TIGR02350;
36741 37589 CDS
ID metaerg.pl|11195
allgo_ids GO:0016787; GO:0016021;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_042202348.1 1 282 evalue:2.3e-149 qcov:100.00 identity:92.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF01546; PF04389;
pfam_desc Peptidase family M20/M25/M40; Peptidase family M28;
pfam_id Peptidase_M20; Peptidase_M28;
pfam_target db:Pfam-A.hmm|PF01546.28 evalue:5.6e-06 score:25.4 best_domain_score:24.8 name:Peptidase_M20; db:Pfam-A.hmm|PF04389.17 evalue:3.5e-33 score:114.2 best_domain_score:113.7 name:Peptidase_M28;
sprot_desc hypothetical protein;
sprot_id sp|P76482|YFBL_ECOLI;
sprot_target db:uniprot_sprot|sp|P76482|YFBL_ECOLI 73 275 evalue:4.2e-33 qcov:72.00 identity:41.10;
37653 37955 CDS
ID metaerg.pl|11196
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
38472 37909 CDS
ID metaerg.pl|11197
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc linckia_B;
genomedb_acc GCF_002368035.1;
genomedb_target db:genomedb|GCF_002368035.1|WP_096534379.1 1 171 evalue:2.7e-42 qcov:91.40 identity:53.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF04970;
pfam_desc Lecithin retinol acyltransferase;
pfam_id LRAT;
pfam_target db:Pfam-A.hmm|PF04970.13 evalue:1.4e-20 score:73.1 best_domain_score:68.7 name:LRAT;
39087 38551 CDS
ID metaerg.pl|11198
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Phormidiaceae;g__Microcoleus;s__Microcoleus nigroviridis;
genomedb_acc GCF_000317475.1;
genomedb_target db:genomedb|GCF_000317475.1|WP_015175521.1 2 177 evalue:3.2e-48 qcov:98.90 identity:67.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
tm_num 2;
39087 38551 transmembrane_helix
ID metaerg.pl|11199
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i38626-38694o38737-38805i;
39654 39121 CDS
ID metaerg.pl|11200
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Coleofasciculaceae;g__Coleofasciculus;s__Coleofasciculus sp000317515;
genomedb_acc GCF_000317515.1;
genomedb_target db:genomedb|GCF_000317515.1|WP_015182435.1 1 177 evalue:1.2e-52 qcov:100.00 identity:64.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
tm_num 2;
39654 39121 transmembrane_helix
ID metaerg.pl|11201
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i39361-39429o39439-39507i;
40023 39769 CDS
ID metaerg.pl|11202
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
40508 40182 CDS
ID metaerg.pl|11203
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090269.1 1 108 evalue:3.8e-52 qcov:100.00 identity:94.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF05534;
pfam_desc HicB family;
pfam_id HicB;
pfam_target db:Pfam-A.hmm|PF05534.12 evalue:3.5e-20 score:70.8 best_domain_score:70.5 name:HicB;
40776 40501 CDS
ID metaerg.pl|11204
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Scytonema;s__Scytonema hofmannii;
genomedb_acc GCF_000346485.2;
genomedb_target db:genomedb|GCF_000346485.2|WP_026134849.1 8 91 evalue:1.3e-37 qcov:92.30 identity:90.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
41889 40867 CDS
ID metaerg.pl|11205
allgo_ids GO:0016491; GO:0055114;
allko_ids K03388;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196941.1 1 334 evalue:1.3e-178 qcov:98.20 identity:92.20;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF01593; PF01266; PF00890; PF01494; PF12831; PF03486; PF05834; PF13450; PF13454; PF07992;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; FAD binding domain; FAD dependent oxidoreductase; HI0933-like protein; Lycopene cyclase protein; NAD(P)-binding Rossmann-like domain; FAD-NAD(P)-binding; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; DAO; FAD_binding_2; FAD_binding_3; FAD_oxidored; HI0933_like; Lycopene_cycl; NAD_binding_8; NAD_binding_9; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:2.8e-24 score:85.4 best_domain_score:43.0 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:1.3e-08 score:34.1 best_domain_score:30.3 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:8.5e-08 score:30.9 best_domain_score:30.1 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:1.6e-05 score:23.6 best_domain_score:23.0 name:FAD_binding_3; db:Pfam-A.hmm|PF12831.7 evalue:1e-08 score:34.2 best_domain_score:33.4 name:FAD_oxidored; db:Pfam-A.hmm|PF03486.14 evalue:2.3e-08 score:32.4 best_domain_score:25.8 name:HI0933_like; db:Pfam-A.hmm|PF05834.12 evalue:6.5e-06 score:24.7 best_domain_score:24.1 name:Lycopene_cycl; db:Pfam-A.hmm|PF13450.6 evalue:7.8e-16 score:57.3 best_domain_score:56.1 name:NAD_binding_8; db:Pfam-A.hmm|PF13454.6 evalue:3.7e-06 score:26.2 best_domain_score:24.2 name:NAD_binding_9; db:Pfam-A.hmm|PF07992.14 evalue:8.6e-09 score:34.3 best_domain_score:32.7 name:Pyr_redox_2;
42062 42961 CDS
ID metaerg.pl|11206
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094022.1 20 299 evalue:1.3e-147 qcov:93.60 identity:96.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
tm_num 1;
42062 42961 transmembrane_helix
ID metaerg.pl|11207
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i42791-42850o;
42958 44298 CDS
ID metaerg.pl|11208
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092522.1 1 446 evalue:2.1e-213 qcov:100.00 identity:85.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF04932;
pfam_desc O-Antigen ligase;
pfam_id Wzy_C;
pfam_target db:Pfam-A.hmm|PF04932.15 evalue:6.5e-12 score:44.6 best_domain_score:44.6 name:Wzy_C;
tm_num 11;
42958 44298 transmembrane_helix
ID metaerg.pl|11209
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology o43015-43083i43120-43179o43192-43251i43288-43356o43459-43527i43564-43632o43645-43713i43717-43785o44014-44082i44119-44187o44200-44253i;
44333 44716 CDS
ID metaerg.pl|11210
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp001597745;
genomedb_acc GCF_001597745.1;
genomedb_target db:genomedb|GCF_001597745.1|WP_066376215.1 1 127 evalue:1.4e-45 qcov:100.00 identity:74.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
44800 45327 CDS
ID metaerg.pl|11211
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198003.1 1 174 evalue:1.3e-83 qcov:99.40 identity:94.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF10726;
pfam_desc Protein of function (DUF2518);
pfam_id DUF2518;
pfam_target db:Pfam-A.hmm|PF10726.9 evalue:3.5e-66 score:220.6 best_domain_score:220.4 name:DUF2518;
sprot_desc Ycf51-like protein;
sprot_id sp|P73690|YC51L_SYNY3;
sprot_target db:uniprot_sprot|sp|P73690|YC51L_SYNY3 6 173 evalue:9.9e-33 qcov:96.00 identity:42.30;
tm_num 2;
44800 45327 transmembrane_helix
ID metaerg.pl|11212
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology o44827-44895i44914-44982o;
45694 46878 CDS
ID metaerg.pl|11213
allec_ids 1.1.-.-;
allgo_ids GO:0016491; GO:0046872; GO:0055114; GO:0016614;
allko_ids K00005;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198004.1 1 394 evalue:1.3e-198 qcov:100.00 identity:94.40;
kegg_pathway_id 00561;
kegg_pathway_name Glycerolipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id GAMMAHEXCHLORDEG-PWY;
metacyc_pathway_name γ-hexachlorocyclohexane degradation;;
metacyc_pathway_type CHLORINATED-COMPOUNDS-DEG;;
pfam_acc PF01761; PF00465; PF13685;
pfam_desc 3-dehydroquinate synthase; Iron-containing alcohol dehydrogenase ; Iron-containing alcohol dehydrogenase;
pfam_id DHQ_synthase; Fe-ADH; Fe-ADH_2;
pfam_target db:Pfam-A.hmm|PF01761.20 evalue:6.8e-07 score:27.9 best_domain_score:22.1 name:DHQ_synthase; db:Pfam-A.hmm|PF00465.19 evalue:1.6e-59 score:200.8 best_domain_score:200.6 name:Fe-ADH; db:Pfam-A.hmm|PF13685.6 evalue:6.7e-24 score:84.2 best_domain_score:83.5 name:Fe-ADH_2;
sprot_desc Uncharacterized oxidoreductase slr1167;
sprot_id sp|P74246|Y1167_SYNY3;
sprot_target db:uniprot_sprot|sp|P74246|Y1167_SYNY3 19 370 evalue:8.0e-115 qcov:89.30 identity:61.90;
46875 48086 CDS
ID metaerg.pl|11214
allec_ids 2.6.1.83;
allgo_ids GO:0009058; GO:0030170; GO:0010285; GO:0033362;
allko_ids K14261; K01760; K00821; K00842; K10907; K00837; K10206; K14155; K00825;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092535.1 1 403 evalue:4.4e-231 qcov:100.00 identity:96.30;
kegg_pathway_id 00272; 00300; 00920; 00271; 00450; 00910; 00310;
kegg_pathway_name Cysteine metabolism; Lysine biosynthesis; Sulfur metabolism; Methionine metabolism; Selenoamino acid metabolism; Nitrogen metabolism; Lysine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id PWY-724; PWY-5097;
metacyc_pathway_name superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-lysine biosynthesis VI;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:8.4e-65 score:218.5 best_domain_score:218.1 name:Aminotran_1_2;
sprot_desc LL-diaminopimelate aminotransferase;
sprot_id sp|B8CX89|DAPAT_HALOH;
sprot_target db:uniprot_sprot|sp|B8CX89|DAPAT_HALOH 9 394 evalue:2.5e-116 qcov:95.80 identity:47.20;
48109 48462 CDS
ID metaerg.pl|11215
allgo_ids GO:0003700; GO:0006355;
casgene_acc COG0640_csa3_CAS-I-A;
casgene_name csa3;
casgene_target db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:1.9e-19 score:69.4 best_domain_score:69.3 name:csa3;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198006.1 1 109 evalue:5.7e-46 qcov:93.20 identity:84.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF12840; PF01022;
pfam_desc Helix-turn-helix domain; Bacterial regulatory protein, arsR family;
pfam_id HTH_20; HTH_5;
pfam_target db:Pfam-A.hmm|PF12840.7 evalue:9.6e-14 score:50.4 best_domain_score:49.8 name:HTH_20; db:Pfam-A.hmm|PF01022.20 evalue:4.3e-19 score:67.4 best_domain_score:66.5 name:HTH_5;
48462 48752 CDS
ID metaerg.pl|11216
allgo_ids GO:0016779;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Fortiea;s__Fortiea contorta;
genomedb_acc GCF_000332295.1;
genomedb_target db:genomedb|GCF_000332295.1|WP_017654133.1 1 96 evalue:7.0e-42 qcov:100.00 identity:92.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF01909; PF18765;
pfam_desc Nucleotidyltransferase domain; Polymerase beta, Nucleotidyltransferase;
pfam_id NTP_transf_2; Polbeta;
pfam_target db:Pfam-A.hmm|PF01909.23 evalue:1.8e-10 score:40.2 best_domain_score:40.0 name:NTP_transf_2; db:Pfam-A.hmm|PF18765.1 evalue:1.1e-09 score:37.5 best_domain_score:37.3 name:Polbeta;
48749 49084 CDS
ID metaerg.pl|11217
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Anabaenopsis;s__Anabaenopsis sp000316625;
genomedb_acc GCF_000316625.1;
genomedb_target db:genomedb|GCF_000316625.1|WP_015113464.1 1 111 evalue:5.6e-51 qcov:100.00 identity:94.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF01934;
pfam_desc Protein of unknown function DUF86;
pfam_id DUF86;
pfam_target db:Pfam-A.hmm|PF01934.17 evalue:6.5e-23 score:80.1 best_domain_score:79.8 name:DUF86;
49426 49614 CDS
ID metaerg.pl|11218
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp002246015;
genomedb_acc GCF_002246015.1;
genomedb_target db:genomedb|GCF_002246015.1|WP_094347334.1 1 62 evalue:2.9e-25 qcov:100.00 identity:98.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
49598 49900 CDS
ID metaerg.pl|11219
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_C;s__Tolypothrix_C hofmanni;
genomedb_acc GCF_000582685.1;
genomedb_target db:genomedb|GCF_000582685.1|WP_029631976.1 8 100 evalue:5.6e-42 qcov:93.00 identity:96.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF05016;
pfam_desc #=GF GA 21.90; 21.90;;
pfam_id ParE_toxin;
pfam_target db:Pfam-A.hmm|PF05016.15 evalue:9.3e-18 score:63.9 best_domain_score:63.6 name:ParE_toxin;
50250 51260 CDS
ID metaerg.pl|11220
allec_ids 1.2.1.12; 1.2.1.-;
allgo_ids GO:0016620; GO:0055114; GO:0005737; GO:0004365; GO:0051287; GO:0050661; GO:0006094; GO:0006096;
allko_ids K00134; K10705;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092686.1 1 336 evalue:1.6e-189 qcov:100.00 identity:97.90;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id PWY-321; PWY-6537; P105-PWY; P41-PWY; PWY-5305; P122-PWY; 4TOLCARBDEG-PWY; GLYCOLYSIS-E-D; ANARESP1-PWY; GLYCOLYSIS; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; GLUCONEO-PWY; PWY-5537; P124-PWY; P185-PWY; TOLSULFDEG-PWY; P461-PWY; PWY-5484; PWY-5195; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; P441-PWY; PWY-5482; GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAGLYCOLYSIS-PWY; PWY-5464;
metacyc_pathway_name cutin biosynthesis;; 4-aminobutanoate degradation II;; TCA cycle IV (2-oxoglutarate decarboxylase);; pyruvate fermentation to acetate and (S)-lactate I;; bixin biosynthesis;; heterolactic fermentation;; 4-toluenecarboxylate degradation;; superpathway of glycolysis and the Entner-Doudoroff pathway;; ; glycolysis I (from glucose 6-phosphate);; 4-hydroxyphenylacetate degradation;; gluconeogenesis I;; pyruvate fermentation to acetate V;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; 4-toluenesulfonate degradation I;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; artemisinin and arteannuin B biosynthesis;; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; superpathway of N-acetylneuraminate degradation;; pyruvate fermentation to acetate II;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; 4-Aminobutyraye-Degradation;; TCA-VARIANTS;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; APOCAROTENOID-SYN;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; AROMATIC-COMPOUNDS-DEGRADATION;; Energy-Metabolism; Super-Pathways;; ; GLYCOLYSIS-VARIANTS;; AROMATIC-COMPOUNDS-DEGRADATION;; Gluconeogenesis;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; 4-Toluenesulfonate-Degradation;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SESQUITERPENE-LACTONE;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; Pyruvate-Acetate-Fermentation;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:1.1e-60 score:203.0 best_domain_score:202.6 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:3.4e-35 score:119.7 best_domain_score:112.9 name:Gp_dh_N;
sprot_desc Glyceraldehyde-3-phosphate dehydrogenase 3;
sprot_id sp|P58559|G3P3_NOSS1;
sprot_target db:uniprot_sprot|sp|P58559|G3P3_NOSS1 1 336 evalue:1.6e-180 qcov:100.00 identity:91.70;
tigrfam_acc TIGR01534;
tigrfam_desc glyceraldehyde-3-phosphate dehydrogenase, type I;
tigrfam_mainrole Energy metabolism;
tigrfam_name GAPDH-I;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01534 evalue:1.3e-116 score:388.6 best_domain_score:388.4 name:TIGR01534;
51379 52638 CDS
ID metaerg.pl|11221
allgo_ids GO:0016021; GO:0055085;
allko_ids K08222; K08219; K08217;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092687.1 1 419 evalue:3.2e-224 qcov:100.00 identity:95.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:4.2e-16 score:58.0 best_domain_score:38.3 name:MFS_1;
tm_num 11;
51379 52638 transmembrane_helix
ID metaerg.pl|11222
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i51415-51483o51520-51588i51607-51666o51676-51735i51892-51960o52078-52137i52150-52218o52246-52314i52327-52395o52438-52506i52519-52578o;
52743 53891 CDS
ID metaerg.pl|11223
allgo_ids GO:0016020; GO:0016021; GO:0005886; GO:0015104; GO:0015297; GO:0015105; GO:0015699; GO:0015700;
allko_ids K03325;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092688.1 1 382 evalue:7.2e-199 qcov:100.00 identity:95.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF01758;
pfam_desc Sodium Bile acid symporter family;
pfam_id SBF;
pfam_target db:Pfam-A.hmm|PF01758.16 evalue:2.5e-63 score:212.5 best_domain_score:212.5 name:SBF;
sprot_desc Uncharacterized transporter slr0944;
sprot_id sp|P74311|Y944_SYNY3;
sprot_target db:uniprot_sprot|sp|P74311|Y944_SYNY3 8 379 evalue:2.3e-167 qcov:97.40 identity:80.90;
tigrfam_acc TIGR00832;
tigrfam_desc arsenical-resistance protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name acr3;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00832 evalue:6.8e-126 score:419.2 best_domain_score:419.0 name:TIGR00832;
tm_num 10;
52743 53891 transmembrane_helix
ID metaerg.pl|11224
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i52812-52871o52899-52967i53028-53096o53160-53228i53247-53315o53358-53426i53460-53528o53556-53624i53661-53729o53742-53810i;
53903 54571 CDS
ID metaerg.pl|11225
allec_ids 1.6.5.2;
allgo_ids GO:0016491; GO:0052851; GO:0010181; GO:0003955; GO:0008753; GO:0055114; GO:0051289; GO:0010038;
allko_ids K11811;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198012.1 1 221 evalue:4.5e-116 qcov:99.50 identity:95.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF03358;
pfam_desc NADPH-dependent FMN reductase;
pfam_id FMN_red;
pfam_target db:Pfam-A.hmm|PF03358.15 evalue:2.2e-26 score:91.7 best_domain_score:91.1 name:FMN_red;
sprot_desc NADPH-dependent quinone reductase ArsH;
sprot_id sp|P74312|ARREH_SYNY3;
sprot_target db:uniprot_sprot|sp|P74312|ARREH_SYNY3 1 199 evalue:1.9e-97 qcov:89.60 identity:85.90;
tigrfam_acc TIGR02690;
tigrfam_desc arsenical resistance protein ArsH;
tigrfam_mainrole Cellular processes;
tigrfam_name resist_ArsH;
tigrfam_sub1role Detoxification;
tigrfam_target db:TIGRFAMs.hmm|TIGR02690 evalue:1.5e-114 score:379.7 best_domain_score:379.5 name:TIGR02690;
55360 54656 CDS
ID metaerg.pl|11226
allec_ids 2.1.1.130;
allgo_ids GO:0008168; GO:0030788; GO:0009236;
allko_ids K03394;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198387.1 1 234 evalue:1.4e-123 qcov:100.00 identity:97.00;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id P381-PWY;
metacyc_pathway_name adenosylcobalamin biosynthesis II (aerobic);;
metacyc_pathway_type De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;;
pfam_acc PF00590;
pfam_desc Tetrapyrrole (Corrin/Porphyrin) Methylases;
pfam_id TP_methylase;
pfam_target db:Pfam-A.hmm|PF00590.20 evalue:1e-45 score:155.5 best_domain_score:155.3 name:TP_methylase;
sprot_desc Precorrin-2 C(20)-methyltransferase;
sprot_id sp|Q9HZU3|COBI_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HZU3|COBI_PSEAE 3 229 evalue:1.1e-60 qcov:97.00 identity:53.20;
tigrfam_acc TIGR01467;
tigrfam_desc precorrin-2 C(20)-methyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cobI_cbiL;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01467 evalue:3e-62 score:209.2 best_domain_score:209.0 name:TIGR01467;
55989 55363 CDS
ID metaerg.pl|11227
allec_ids 5.4.99.61;
allgo_ids GO:0009236; GO:0016993;
allko_ids K06042;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198388.1 1 208 evalue:5.1e-106 qcov:100.00 identity:98.60;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF02570;
pfam_desc Precorrin-8X methylmutase;
pfam_id CbiC;
pfam_target db:Pfam-A.hmm|PF02570.15 evalue:1.1e-73 score:246.3 best_domain_score:246.1 name:CbiC;
sprot_desc Precorrin-8X methylmutase;
sprot_id sp|Q9HZU2|COBH_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HZU2|COBH_PSEAE 1 208 evalue:1.4e-73 qcov:100.00 identity:69.70;
57570 56077 CDS
ID metaerg.pl|11228
allec_ids 1.7.7.1; 1.14.13.83;
allgo_ids GO:0016491; GO:0020037; GO:0051536; GO:0055114; GO:0009507; GO:0051539; GO:0048307; GO:0046872; GO:0042128;
allko_ids K00441; K11181; K00362; K00392; K00366; K00381; K11180;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804398.1 1 497 evalue:1.8e-250 qcov:100.00 identity:86.90;
kegg_pathway_id 00633; 00920; 00910; 00450; 00790;
kegg_pathway_name Trinitrotoluene degradation; Sulfur metabolism; Nitrogen metabolism; Selenoamino acid metabolism; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id PWY490-3; PWY-381; P381-PWY;
metacyc_pathway_name nitrate reduction VI (assimilatory);; nitrate reduction II (assimilatory);; adenosylcobalamin biosynthesis II (aerobic);;
metacyc_pathway_type Nitrate-Reduction;; Nitrate-Reduction;; De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;;
pfam_acc PF01077; PF03460;
pfam_desc Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain;
pfam_id NIR_SIR; NIR_SIR_ferr;
pfam_target db:Pfam-A.hmm|PF01077.22 evalue:4.8e-25 score:87.1 best_domain_score:66.4 name:NIR_SIR; db:Pfam-A.hmm|PF03460.17 evalue:1.8e-36 score:123.0 best_domain_score:73.5 name:NIR_SIR_ferr;
sprot_desc Ferredoxin--nitrite reductase, chloroplastic;
sprot_id sp|P17847|NIR_MAIZE;
sprot_target db:uniprot_sprot|sp|P17847|NIR_MAIZE 10 427 evalue:1.0e-58 qcov:84.10 identity:31.90;
tigrfam_acc TIGR02435;
tigrfam_desc precorrin-3B synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name CobG;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR02435 evalue:6.2e-106 score:353.8 best_domain_score:353.4 name:TIGR02435;
58343 59554 CDS
ID metaerg.pl|11229
allec_ids 2.1.1.132;
allgo_ids GO:0008168; GO:0046025; GO:0008276; GO:0009236;
allko_ids K00595;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804400.1 1 403 evalue:9.3e-221 qcov:100.00 identity:92.60;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id P381-PWY;
metacyc_pathway_name adenosylcobalamin biosynthesis II (aerobic);;
metacyc_pathway_type De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;;
pfam_acc PF00590;
pfam_desc Tetrapyrrole (Corrin/Porphyrin) Methylases;
pfam_id TP_methylase;
pfam_target db:Pfam-A.hmm|PF00590.20 evalue:1.2e-18 score:67.1 best_domain_score:65.7 name:TP_methylase;
sprot_desc Precorrin-6Y C(5,15)-methyltransferase [decarboxylating];
sprot_id sp|Q9HZU0|COBL_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HZU0|COBL_PSEAE 2 396 evalue:4.5e-121 qcov:98.00 identity:52.40;
tigrfam_acc TIGR02467; TIGR02469;
tigrfam_desc precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name CbiE; CbiT;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR02467 evalue:7.8e-46 score:155.3 best_domain_score:154.9 name:TIGR02467; db:TIGRFAMs.hmm|TIGR02469 evalue:3.6e-34 score:116.8 best_domain_score:115.7 name:TIGR02469;
60141 59578 CDS
ID metaerg.pl|11230
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196057.1 1 187 evalue:5.3e-94 qcov:100.00 identity:90.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF05685;
pfam_desc Putative restriction endonuclease;
pfam_id Uma2;
pfam_target db:Pfam-A.hmm|PF05685.12 evalue:1.2e-38 score:131.5 best_domain_score:131.4 name:Uma2;
sprot_desc hypothetical protein;
sprot_id sp|P72873|Y925_SYNY3;
sprot_target db:uniprot_sprot|sp|P72873|Y925_SYNY3 8 182 evalue:1.0e-43 qcov:93.60 identity:44.60;
60310 62739 CDS
ID metaerg.pl|11231
allec_ids 2.4.1.13;
allgo_ids GO:0005985; GO:0016157;
allko_ids K00695; K12989;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092697.1 1 808 evalue:0.0e+00 qcov:99.90 identity:91.60;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id PWY-621; PWY-3801; PWY-5114; SUCSYN-PWY; PWY-3821;
metacyc_pathway_name sucrose degradation III (sucrose invertase);; sucrose degradation II (sucrose synthase);; UDP-sugars interconversion;; sucrose biosynthesis I (from photosynthesis);; D-galactose detoxification;;
metacyc_pathway_type SUCROSE-DEG;; SUCROSE-DEG;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; Sucrose-Biosynthesis; Super-Pathways;; Detoxification;;
pfam_acc PF00534; PF13692; PF00862;
pfam_desc Glycosyl transferases group 1; Glycosyl transferases group 1; Sucrose synthase;
pfam_id Glycos_transf_1; Glyco_trans_1_4; Sucrose_synth;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:3.2e-18 score:65.1 best_domain_score:63.6 name:Glycos_transf_1; db:Pfam-A.hmm|PF13692.6 evalue:9.3e-07 score:28.6 best_domain_score:27.5 name:Glyco_trans_1_4; db:Pfam-A.hmm|PF00862.19 evalue:1.5e-219 score:729.1 best_domain_score:728.7 name:Sucrose_synth;
sprot_desc Sucrose synthase;
sprot_id sp|Q8DK23|SUS_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DK23|SUS_THEEB 4 802 evalue:1.3e-260 qcov:98.80 identity:54.30;
tigrfam_acc TIGR02470;
tigrfam_desc sucrose synthase;
tigrfam_mainrole Energy metabolism;
tigrfam_name sucr_synth;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02470 evalue:0 score:1123.7 best_domain_score:1123.5 name:TIGR02470;
62780 65719 CDS
ID metaerg.pl|11232
allec_ids 2.4.1.230; 5.4.2.6;
allgo_ids GO:0003824; GO:0005975; GO:0030246; GO:0033831;
allko_ids K03731; K05344; K01838; K00691; K01194; K10231;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094037.1 2 979 evalue:0.0e+00 qcov:99.90 identity:91.00;
kegg_pathway_id 00010; 00500;
kegg_pathway_name Glycolysis / Gluconeogenesis; Starch and sucrose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id MALTOSECAT-PWY; PWY-2722; PWY-6317; PWY-5114; PWY-2721;
metacyc_pathway_name maltose degradation;; trehalose degradation IV;; D-galactose degradation I (Leloir pathway);; UDP-sugars interconversion;; trehalose degradation III;;
metacyc_pathway_type Sugars-And-Polysaccharides-Degradation;; Trehalose-Degradation;; GALACTOSE-DEGRADATION;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; Trehalose-Degradation;;
pfam_acc PF03633; PF03632; PF03636; PF13419; PF00702; PF13242;
pfam_desc Glycosyl hydrolase family 65, C-terminal domain ; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain ; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id Glyco_hydro_65C; Glyco_hydro_65m; Glyco_hydro_65N; HAD_2; Hydrolase; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF03633.15 evalue:2.1e-08 score:33.2 best_domain_score:30.1 name:Glyco_hydro_65C; db:Pfam-A.hmm|PF03632.15 evalue:1.9e-118 score:394.9 best_domain_score:394.4 name:Glyco_hydro_65m; db:Pfam-A.hmm|PF03636.15 evalue:5.5e-76 score:254.4 best_domain_score:253.9 name:Glyco_hydro_65N; db:Pfam-A.hmm|PF13419.6 evalue:1.1e-27 score:96.4 best_domain_score:95.7 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:2.1e-18 score:66.6 best_domain_score:65.9 name:Hydrolase; db:Pfam-A.hmm|PF13242.6 evalue:2.9e-05 score:23.3 best_domain_score:21.4 name:Hydrolase_like;
sprot_desc Kojibiose phosphorylase;
sprot_id sp|Q8L163|KOJP_THEBR;
sprot_target db:uniprot_sprot|sp|Q8L163|KOJP_THEBR 8 738 evalue:5.0e-142 qcov:74.70 identity:36.60;
tigrfam_acc TIGR01509; TIGR01549; TIGR01990; TIGR02009;
tigrfam_desc HAD hydrolase, family IA, variant 3; HAD hydrolase, family IA, variant 1; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase;
tigrfam_mainrole Unknown function; Unknown function; Energy metabolism;
tigrfam_name HAD-SF-IA-v3; HAD-SF-IA-v1; bPGM; PGMB-YQAB-SF;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity; Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:1.9e-21 score:76.0 best_domain_score:66.6 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01549 evalue:1.8e-06 score:27.6 best_domain_score:19.1 name:TIGR01549; db:TIGRFAMs.hmm|TIGR01990 evalue:3.3e-76 score:254.6 best_domain_score:253.6 name:TIGR01990; db:TIGRFAMs.hmm|TIGR02009 evalue:2.1e-62 score:209.8 best_domain_score:207.6 name:TIGR02009;
67480 66065 CDS
ID metaerg.pl|11233
allec_ids 5.4.4.2;
allgo_ids GO:0008909; GO:0000287; GO:0009234; GO:0009697;
allko_ids K01665; K01664; K03342; K02619; K01657; K01656; K01663; K13950; K13497; K01658; K13501; K02552;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092698.1 1 471 evalue:7.2e-249 qcov:100.00 identity:92.40;
kegg_pathway_id 00620; 02020; 00130; 01053; 00790; 00400;
kegg_pathway_name Pyruvate metabolism; Two-component system - General; Ubiquinone biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; Folate biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id ALL-CHORISMATE-PWY; PWY-5897; PWY-5899; PWY-5850; PWY-5861; PWY-5838; PWY-5791; PWY-5837; PWY-5840; PWY-5863; PWY-6406; PWY-5898; PWY-5860; PWY-5845; PWY-5862; PWY-5896;
metacyc_pathway_name superpathway of chorismate metabolism;; superpathway of menaquinol-11 biosynthesis;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-6 biosynthesis I;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-8 biosynthesis I;; ; 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of menaquinol-7 biosynthesis;; superpathway of phylloquinol biosynthesis;; salicylate biosynthesis I;; superpathway of menaquinol-12 biosynthesis;; superpathway of demethylmenaquinol-6 biosynthesis I;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;;
metacyc_pathway_type Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; ; DHNA-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Salicylate-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF00425;
pfam_desc chorismate binding enzyme;
pfam_id Chorismate_bind;
pfam_target db:Pfam-A.hmm|PF00425.18 evalue:1.2e-69 score:234.0 best_domain_score:233.3 name:Chorismate_bind;
sprot_desc Isochorismate synthase MenF;
sprot_id sp|P23973|MENF_BACSU;
sprot_target db:uniprot_sprot|sp|P23973|MENF_BACSU 36 470 evalue:6.8e-44 qcov:92.40 identity:30.00;
tigrfam_acc TIGR00543;
tigrfam_desc isochorismate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name isochor_syn;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR00543 evalue:1.6e-103 score:345.8 best_domain_score:345.4 name:TIGR00543;
67848 68753 CDS
ID metaerg.pl|11234
allec_ids 2.5.1.130; 2.5.1.-;
allgo_ids GO:0016021; GO:0016765; GO:0005887; GO:0004659; GO:0009234; GO:0042372; GO:0032194; GO:0042371;
allko_ids K00810; K03179; K02548; K23094;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196062.1 1 301 evalue:1.6e-161 qcov:100.00 identity:95.70;
kegg_pathway_id 00510; 00130;
kegg_pathway_name N-Glycan biosynthesis; Ubiquinone biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id PWY-5898; PWY-5816; PWY-5863; PWY-5896; PWY-5862; PWY-5845; PWY-5068; PWY-2681; PWY-5701; PWY-5140; PWY-5135; PWY-6404; PWY-5806; PWY-724; PWY-5861; PWY-6262; PWY-5805; PWY-5783; POLYISOPRENSYN-PWY; PWY-5132; PWY-5808; PWY-5897; PWY-6263; PWY-5133; PWY-5864; PWY-6129; PWY-6383; PWY-5027; PWY-5893; PWY-5838; PWY-5064; PWY-4502; PWY-5899; PWY-5134; PWY-6520; PWY-5817; PWY-6403;
metacyc_pathway_name superpathway of menaquinol-12 biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;; shikonin biosynthesis;; cannabinoid biosynthesis;; xanthohumol biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; demethylmenaquinol-8 biosynthesis II;; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; polyisoprenoid biosynthesis (E. coli);; lupulone and humulone biosynthesis;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; chlorophyll a biosynthesis II;; wighteone and luteone biosynthesis;; superpathway of menaquinol-13 biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; dodecaprenyl diphosphate biosynthesis;; carrageenan biosynthesis;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; QUINONE-SYN;; TERPENOPHENOLICS-SYN;; PRENYLFLAVONOID-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polysaccharides-Biosynthesis;;
pfam_acc PF01040;
pfam_desc UbiA prenyltransferase family;
pfam_id UbiA;
pfam_target db:Pfam-A.hmm|PF01040.18 evalue:3.7e-29 score:101.0 best_domain_score:100.7 name:UbiA;
sprot_desc 2-carboxy-1,4-naphthoquinone phytyltransferase;
sprot_id sp|P73962|MENA_SYNY3;
sprot_target db:uniprot_sprot|sp|P73962|MENA_SYNY3 12 300 evalue:1.6e-83 qcov:96.00 identity:56.40;
tigrfam_acc TIGR02235;
tigrfam_desc 1,4-dihydroxy-2-naphthoate phytyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name menA_cyano-plnt;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR02235 evalue:3.7e-123 score:409.5 best_domain_score:409.3 name:TIGR02235;
tm_num 8;
67848 68753 transmembrane_helix
ID metaerg.pl|11235
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology o67905-67964i67983-68042o68121-68189i68208-68267o68280-68348i68367-68435o68535-68603i68682-68741o;
68761 69723 CDS
ID metaerg.pl|11236
allec_ids 4.2.1.113;
allgo_ids GO:0016836; GO:0000287; GO:0009234; GO:0042372;
allko_ids K02549;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196063.1 2 319 evalue:1.7e-156 qcov:99.40 identity:85.50;
kegg_pathway_id 00130;
kegg_pathway_name Ubiquinone biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id PWY-5840; PWY-5897; ALL-CHORISMATE-PWY; PWY-5837; PWY-5845; PWY-5862; PWY-5896; PWY-5791; PWY-5860; PWY-5898; PWY-5838; PWY-5861; PWY-5899; PWY-5863; PWY-5850;
metacyc_pathway_name superpathway of menaquinol-7 biosynthesis;; superpathway of menaquinol-11 biosynthesis;; superpathway of chorismate metabolism;; 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; ; superpathway of demethylmenaquinol-6 biosynthesis I;; superpathway of menaquinol-12 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-6 biosynthesis I;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Super-Pathways;; DHNA-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; ; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF13378;
pfam_desc Enolase C-terminal domain-like;
pfam_id MR_MLE_C;
pfam_target db:Pfam-A.hmm|PF13378.6 evalue:1.8e-23 score:82.5 best_domain_score:81.6 name:MR_MLE_C;
sprot_desc o-succinylbenzoate synthase;
sprot_id sp|Q55117|MENC_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55117|MENC_SYNY3 16 312 evalue:1.2e-60 qcov:92.80 identity:43.30;
tigrfam_acc TIGR01927;
tigrfam_desc o-succinylbenzoate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name menC_gamma/gm+;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR01927 evalue:1.7e-102 score:342.0 best_domain_score:341.8 name:TIGR01927;
69928 71352 CDS
ID metaerg.pl|11237
allgo_ids GO:0003824;
allko_ids K01904; K01909; K01652; K01897; K00143; K05939; K01586; K01779; K00992; K02364;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092702.1 1 466 evalue:1.5e-238 qcov:98.30 identity:86.70;
kegg_pathway_id 00252; 00300; 00071; 00650; 00660; 00290; 00564; 00310; 01053; 00770; 00940;
kegg_pathway_name Alanine and aspartate metabolism; Lysine biosynthesis; Fatty acid metabolism; Butanoate metabolism; C5-Branched dibasic acid metabolism; Valine, leucine and isoleucine biosynthesis; Glycerophospholipid metabolism; Lysine degradation; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Phenylpropanoid biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:6.1e-37 score:126.4 best_domain_score:114.8 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:4.6e-13 score:49.2 best_domain_score:48.2 name:AMP-binding_C;
71922 71476 CDS
ID metaerg.pl|11238
allec_ids 3.1.2.28;
allgo_ids GO:0016790; GO:0042372;
allko_ids K12073;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092703.1 1 148 evalue:6.1e-69 qcov:100.00 identity:89.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF03061; PF13279;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily;
pfam_id 4HBT; 4HBT_2;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:7.6e-08 score:31.8 best_domain_score:31.3 name:4HBT; db:Pfam-A.hmm|PF13279.6 evalue:2e-08 score:34.0 best_domain_score:33.8 name:4HBT_2;
sprot_desc 1,4-dihydroxy-2-naphthoyl-CoA hydrolase;
sprot_id sp|B2IZ83|DNCH_NOSP7;
sprot_target db:uniprot_sprot|sp|B2IZ83|DNCH_NOSP7 1 148 evalue:2.8e-60 qcov:100.00 identity:77.00;
73105 72017 CDS
ID metaerg.pl|11239
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196066.1 1 362 evalue:1.4e-196 qcov:100.00 identity:92.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF17914;
pfam_desc HopA1 effector protein family;
pfam_id HopA1;
pfam_target db:Pfam-A.hmm|PF17914.1 evalue:1.2e-61 score:206.7 best_domain_score:206.3 name:HopA1;
74382 73144 CDS
ID metaerg.pl|11240
allko_ids K00899;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092705.1 1 412 evalue:4.3e-213 qcov:100.00 identity:90.00;
kegg_pathway_id 00271;
kegg_pathway_name Methionine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF01636; PF01633; PF02958;
pfam_desc Phosphotransferase enzyme family; Choline/ethanolamine kinase; Ecdysteroid kinase;
pfam_id APH; Choline_kinase; EcKinase;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:6e-16 score:58.3 best_domain_score:57.6 name:APH; db:Pfam-A.hmm|PF01633.20 evalue:2.7e-08 score:32.9 best_domain_score:31.1 name:Choline_kinase; db:Pfam-A.hmm|PF02958.20 evalue:2.9e-05 score:22.8 best_domain_score:22.0 name:EcKinase;
75422 75102 CDS
ID metaerg.pl|11241
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092706.1 1 106 evalue:6.8e-38 qcov:100.00 identity:90.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF03647;
pfam_desc Transmembrane proteins 14C;
pfam_id Tmemb_14;
pfam_target db:Pfam-A.hmm|PF03647.13 evalue:2.3e-22 score:78.8 best_domain_score:78.6 name:Tmemb_14;
tm_num 4;
75422 75102 transmembrane_helix
ID metaerg.pl|11242
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology o75114-75173i75192-75251o75261-75329i75348-75416o;
75499 76851 CDS
ID metaerg.pl|11243
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196070.1 1 450 evalue:1.4e-241 qcov:100.00 identity:93.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF00004; PF05673;
pfam_desc ATPase family associated with various cellular activities (AAA); Protein of unknown function (DUF815);
pfam_id AAA; DUF815;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:4.7e-07 score:29.5 best_domain_score:28.1 name:AAA; db:Pfam-A.hmm|PF05673.13 evalue:4.8e-101 score:336.3 best_domain_score:335.9 name:DUF815;
77008 78336 CDS
ID metaerg.pl|11244
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092708.1 19 442 evalue:1.1e-198 qcov:95.90 identity:87.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF15615;
pfam_desc TerB-C domain;
pfam_id TerB_C;
pfam_target db:Pfam-A.hmm|PF15615.6 evalue:8.5e-14 score:51.3 best_domain_score:51.3 name:TerB_C;
tm_num 2;
77008 78336 transmembrane_helix
ID metaerg.pl|11245
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
topology i77077-77136o77164-77217i;
78455 79780 CDS
ID metaerg.pl|11246
allko_ids K01251;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092709.1 1 441 evalue:3.0e-241 qcov:100.00 identity:95.90;
kegg_pathway_id 00450; 00271;
kegg_pathway_name Selenoamino acid metabolism; Methionine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF10923;
pfam_desc P-loop Domain of unknown function (DUF2791);
pfam_id DUF2791;
pfam_target db:Pfam-A.hmm|PF10923.8 evalue:2.6e-166 score:552.8 best_domain_score:552.6 name:DUF2791;
79994 80275 CDS
ID metaerg.pl|11247
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_B;s__Tolypothrix_B sp002368235;
genomedb_acc GCF_002368235.1;
genomedb_target db:genomedb|GCF_002368235.1|WP_073631185.1 1 93 evalue:6.6e-37 qcov:100.00 identity:86.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
80268 80663 CDS
ID metaerg.pl|11248
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_B;s__Tolypothrix_B sp002368435;
genomedb_acc GCF_002368435.1;
genomedb_target db:genomedb|GCF_002368435.1|WP_073631183.1 1 131 evalue:4.1e-61 qcov:100.00 identity:89.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
pfam_acc PF01850;
pfam_desc PIN domain;
pfam_id PIN;
pfam_target db:Pfam-A.hmm|PF01850.21 evalue:4.7e-13 score:49.0 best_domain_score:48.6 name:PIN;
81188 80763 CDS
ID metaerg.pl|11249
allec_ids 1.8.1.7;
allgo_ids GO:0045454; GO:0055114; GO:0005737; GO:0009055; GO:0050660; GO:0004362; GO:0050661; GO:0006749;
allko_ids K00383;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092713.1 1 141 evalue:4.9e-68 qcov:100.00 identity:95.00;
kegg_pathway_id 00251; 00480;
kegg_pathway_name Glutamate metabolism; Glutathione metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0397344; 73.1047; ; 0.0108221; 73.1553;
metacyc_pathway_id PWY-4081; GLUT-REDOX-PWY;
metacyc_pathway_name glutathione-peroxide redox reactions;; glutathione-glutaredoxin redox reactions;;
metacyc_pathway_type Reductants;; Reductants;;
pfam_acc PF02852;
pfam_desc Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF02852.22 evalue:3.9e-38 score:129.3 best_domain_score:129.0 name:Pyr_redox_dim;
sprot_desc Glutathione reductase;
sprot_id sp|P48638|GSHR_NOSS1;
sprot_target db:uniprot_sprot|sp|P48638|GSHR_NOSS1 1 141 evalue:1.4e-50 qcov:100.00 identity:72.50;
>Feature NODE_84_length_80068_cov_44.9262
146 766 CDS
ID metaerg.pl|11250
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__PCC-7507;s__PCC-7507 sp000316575;
genomedb_acc GCF_000316575.1;
genomedb_target db:genomedb|GCF_000316575.1|WP_015127163.1 1 206 evalue:2.9e-69 qcov:100.00 identity:67.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
759 1154 CDS
ID metaerg.pl|11251
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092096.1 1 130 evalue:8.3e-62 qcov:99.20 identity:93.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF02661;
pfam_desc Fic/DOC family;
pfam_id Fic;
pfam_target db:Pfam-A.hmm|PF02661.18 evalue:2.7e-13 score:49.8 best_domain_score:49.4 name:Fic;
tigrfam_acc TIGR01550;
tigrfam_desc death-on-curing family protein;
tigrfam_mainrole Unknown function;
tigrfam_name DOC_P1;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR01550 evalue:1.7e-20 score:72.6 best_domain_score:72.4 name:TIGR01550;
4975 1217 CDS
ID metaerg.pl|11252
allec_ids 6.6.1.1;
allgo_ids GO:0009058; GO:0005524; GO:0016851; GO:0036070; GO:0015979;
allko_ids K03403;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195186.1 22 1252 evalue:0.0e+00 qcov:98.30 identity:94.70;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
metacyc_pathway_id PWY-5531; PWY-5529; CHLOROPHYLL-SYN;
metacyc_pathway_name 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; superpathway of bacteriochlorophyll a biosynthesis;; 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);;
metacyc_pathway_type Chlorophyllide-a-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;;
pfam_acc PF02514; PF11965;
pfam_desc CobN/Magnesium Chelatase; Domain of unknown function (DUF3479);
pfam_id CobN-Mg_chel; DUF3479;
pfam_target db:Pfam-A.hmm|PF02514.16 evalue:0 score:1102.6 best_domain_score:590.5 name:CobN-Mg_chel; db:Pfam-A.hmm|PF11965.8 evalue:6.8e-51 score:171.8 best_domain_score:171.0 name:DUF3479;
sprot_desc Magnesium-chelatase subunit H;
sprot_id sp|O50314|BCHH_CHLP8;
sprot_target db:uniprot_sprot|sp|O50314|BCHH_CHLP8 23 1250 evalue:5.6e-263 qcov:98.10 identity:37.90;
tigrfam_acc TIGR02025;
tigrfam_desc magnesium chelatase, H subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name BchH;
tigrfam_sub1role Chlorophyll and bacteriochlorphyll;
tigrfam_target db:TIGRFAMs.hmm|TIGR02025 evalue:0 score:1634.4 best_domain_score:957.3 name:TIGR02025;
6490 5204 CDS
ID metaerg.pl|11253
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc flagelliforme;
genomedb_acc GCF_002813575.1;
genomedb_target db:genomedb|GCF_002813575.1|WP_100903205.1 8 427 evalue:5.5e-179 qcov:98.10 identity:74.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
sp YES;
5204 5296 signal_peptide
ID metaerg.pl|11254
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
6919 8115 CDS
ID metaerg.pl|11255
allec_ids 1.3.99.-;
allgo_ids GO:0016627; GO:0055114; GO:0005886; GO:0003995; GO:0050660; GO:0052890; GO:0030435;
allko_ids K11731; K00249; K14448; K00252; K09478; K00253; K11410; K00248; K06446; K18244;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp002949795;
genomedb_acc GCF_002949795.1;
genomedb_target db:genomedb|GCF_002949795.1|WP_104908832.1 1 398 evalue:9.9e-191 qcov:100.00 identity:86.20;
kegg_pathway_id 00310; 00280; 00632; 00930; 00380; 00071; 00410; 00650; 00640;
kegg_pathway_name Lysine degradation; Valine, leucine and isoleucine degradation; Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Fatty acid metabolism; beta-Alanine metabolism; Butanoate metabolism; Propanoate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
metacyc_pathway_id CARNMET-PWY; PWY-2582; PWY-6544; PWY-699;
metacyc_pathway_name L-carnitine degradation I;; brassinosteroid biosynthesis II;; superpathway of C28 brassinosteroid biosynthesis;; brassinosteroid biosynthesis I;;
metacyc_pathway_type CARN-DEG;; Brassinosteroid-Biosynthesis;; Super-Pathways;; Brassinosteroid-Biosynthesis;;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:3.8e-26 score:91.3 best_domain_score:90.3 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:1.2e-13 score:50.7 best_domain_score:50.7 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:1.2e-14 score:53.5 best_domain_score:52.1 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:5.8e-19 score:68.1 best_domain_score:65.2 name:Acyl-CoA_dh_N;
sprot_desc Acyl-CoA dehydrogenase;
sprot_id sp|P45857|ACDB_BACSU;
sprot_target db:uniprot_sprot|sp|P45857|ACDB_BACSU 6 398 evalue:8.5e-48 qcov:98.70 identity:34.80;
8302 9456 CDS
ID metaerg.pl|11256
allec_ids 1.1.1.-;
allgo_ids GO:0016491; GO:0046872; GO:0055114; GO:0005829; GO:0008106; GO:0018455; GO:1990002; GO:0008270; GO:0000302;
allko_ids K00120; K08325;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195184.1 1 384 evalue:2.4e-210 qcov:100.00 identity:95.10;
kegg_pathway_id 00624; 00903; 00626; 00361; 00632;
kegg_pathway_name 1- and 2-Methylnaphthalene degradation; Limonene and pinene degradation; Naphthalene and anthracene degradation; gamma-Hexachlorocyclohexane degradation; Benzoate degradation via CoA ligation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
metacyc_pathway_id PWY-882; PWY-5327; PWY-5789; PWY-481; TOLSULFDEG-PWY; PWY-5048; ECASYN-PWY; PWY-6577; 4TOLCARBDEG-PWY; CENTBENZCOA-PWY; LYSDEGII-PWY; PWY-321; PWY-6516; PWY1A0-6325; PWY-6419; SUCROSEUTIL2-PWY; PWY-1186; P302-PWY; PWY-5516; PWY-5392; PWY-6501; PWY-5184; PWY-5197; BENZCOA-PWY; PWY-6575; PWY-5972; PWY-5466; PWY-5195;
metacyc_pathway_name L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of L-lysine degradation;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; ethylbenzene degradation (anaerobic);; 4-toluenesulfonate degradation I;; rosmarinic acid biosynthesis I;; enterobacterial common antigen biosynthesis;; farnesylcysteine salvage pathway;; 4-toluenecarboxylate degradation;; benzoyl-CoA degradation II (anaerobic);; L-lysine degradation III;; cutin biosynthesis;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; actinorhodin biosynthesis;; shikimate degradation II;; sucrose degradation VII (sucrose 3-dehydrogenase);; L-homomethionine biosynthesis;; L-sorbose degradation;; D-xylose degradation II;; reductive TCA cycle II;; D-glucuronate degradation II;; toluene degradation VI (anaerobic);; lactate biosynthesis (archaea);; anaerobic aromatic compound degradation (Thauera aromatica);; juvenile hormone III biosynthesis I;; stearate biosynthesis I (animals and fungi);; matairesinol biosynthesis;; artemisinin and arteannuin B biosynthesis;;
metacyc_pathway_type Ascorbate-Biosynthesis;; LYSINE-DEG; Super-Pathways;; Autotrophic-CO2-Fixation;; AROMATIC-COMPOUNDS-DEGRADATION;; 4-Toluenesulfonate-Degradation;; Rosmarinate-Biosynthesis;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; AROMATIC-COMPOUNDS-DEGRADATION;; Benzoyl-CoA-Degradation;; LYSINE-DEG;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; Sugar-Derivatives; Super-Pathways;; Antibiotic-Biosynthesis;; Shikimate-Degradation;; SUCROSE-DEG;; Other-Amino-Acid-Biosynthesis;; Sugars-And-Polysaccharides-Degradation;; Xylose-Degradation;; Reductive-TCA-Cycles;; D-Glucuronate-Degradation;; Super-Pathways; TOLUENE-DEG;; Energy-Metabolism;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; HORMONE-SYN; JH-III-Biosynthesis;; Stearate-Biosynthesis;; LIGNAN-SYN;; SESQUITERPENE-LACTONE;;
pfam_acc PF00465; PF13685;
pfam_desc Iron-containing alcohol dehydrogenase ; Iron-containing alcohol dehydrogenase;
pfam_id Fe-ADH; Fe-ADH_2;
pfam_target db:Pfam-A.hmm|PF00465.19 evalue:2.3e-89 score:299.0 best_domain_score:298.7 name:Fe-ADH; db:Pfam-A.hmm|PF13685.6 evalue:1.2e-12 score:47.4 best_domain_score:30.2 name:Fe-ADH_2;
sprot_desc Alcohol dehydrogenase YqhD;
sprot_id sp|Q46856|YQHD_ECOLI;
sprot_target db:uniprot_sprot|sp|Q46856|YQHD_ECOLI 1 379 evalue:4.4e-126 qcov:98.70 identity:58.10;
10529 13249 CDS
ID metaerg.pl|11257
allec_ids 7.4.2.5;
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0030256; GO:0016887; GO:0030253; GO:0006508;
allko_ids K02010; K05847; K02006; K02052; K02017; K06861; K02071; K01996; K02045; K11072; K01995; K02049; K10111; K02023; K02000;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093981.1 23 906 evalue:0.0e+00 qcov:97.60 identity:98.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00664; PF00005; PF00027; PF03412; PF12385;
pfam_desc ABC transporter transmembrane region; ABC transporter; Cyclic nucleotide-binding domain; Peptidase C39 family; Papain-like cysteine protease AvrRpt2;
pfam_id ABC_membrane; ABC_tran; cNMP_binding; Peptidase_C39; Peptidase_C70;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:2.1e-47 score:161.3 best_domain_score:160.7 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:2.7e-36 score:124.3 best_domain_score:123.0 name:ABC_tran; db:Pfam-A.hmm|PF00027.29 evalue:1e-08 score:34.3 best_domain_score:33.1 name:cNMP_binding; db:Pfam-A.hmm|PF03412.15 evalue:6.9e-43 score:144.9 best_domain_score:143.9 name:Peptidase_C39; db:Pfam-A.hmm|PF12385.8 evalue:2.2e-08 score:33.5 best_domain_score:32.6 name:Peptidase_C70;
sprot_desc Leukotoxin translocation ATP-binding protein LktB;
sprot_id sp|Q933I3|LKTB_MANGL;
sprot_target db:uniprot_sprot|sp|Q933I3|LKTB_MANGL 202 903 evalue:1.4e-135 qcov:77.50 identity:40.20;
tm_num 4;
10529 13249 transmembrane_helix
ID metaerg.pl|11258
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology o11561-11629i11666-11734o11912-11980i11984-12052o;
13301 14881 CDS
ID metaerg.pl|11259
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092093.1 1 526 evalue:4.9e-270 qcov:100.00 identity:95.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00364; PF13533; PF13437;
pfam_desc Biotin-requiring enzyme; Biotin-lipoyl like; HlyD family secretion protein;
pfam_id Biotin_lipoyl; Biotin_lipoyl_2; HlyD_3;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:1.3e-06 score:27.3 best_domain_score:20.5 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:7.2e-12 score:44.2 best_domain_score:44.2 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:1.6e-22 score:79.4 best_domain_score:62.9 name:HlyD_3;
tigrfam_acc TIGR01843;
tigrfam_desc type I secretion membrane fusion protein, HlyD family;
tigrfam_mainrole Protein fate;
tigrfam_name type_I_hlyD;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01843 evalue:9.1e-65 score:218.4 best_domain_score:132.9 name:TIGR01843;
tm_num 1;
13301 14881 transmembrane_helix
ID metaerg.pl|11260
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology i13502-13570o;
14967 15713 CDS
ID metaerg.pl|11261
allgo_ids GO:0003755;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp001597745;
genomedb_acc GCF_001597745.1;
genomedb_target db:genomedb|GCF_001597745.1|WP_066384172.1 1 246 evalue:8.3e-95 qcov:99.20 identity:70.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00639; PF13616;
pfam_desc PPIC-type PPIASE domain; PPIC-type PPIASE domain;
pfam_id Rotamase; Rotamase_3;
pfam_target db:Pfam-A.hmm|PF00639.21 evalue:8.3e-12 score:45.2 best_domain_score:42.5 name:Rotamase; db:Pfam-A.hmm|PF13616.6 evalue:5.5e-08 score:32.6 best_domain_score:31.3 name:Rotamase_3;
16298 16504 CDS
ID metaerg.pl|11262
allgo_ids GO:0042742;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__PCC-6802;s__PCC-6802 sp000332175;
genomedb_acc GCF_000332175.1;
genomedb_target db:genomedb|GCF_000332175.1|WP_019501041.1 1 63 evalue:1.2e-08 qcov:92.60 identity:49.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF10439;
pfam_desc Bacteriocin class II with double-glycine leader peptide;
pfam_id Bacteriocin_IIc;
pfam_target db:Pfam-A.hmm|PF10439.9 evalue:1.5e-06 score:27.4 best_domain_score:27.0 name:Bacteriocin_IIc;
tigrfam_acc TIGR01847; TIGR03949;
tigrfam_desc bacteriocin-type signal sequence; class IIb bacteriocin, lactobin A/cerein 7B family;
tigrfam_name bacteriocin_sig; bact_IIb_cerein;
tigrfam_target db:TIGRFAMs.hmm|TIGR01847 evalue:0.0058 score:16.4 best_domain_score:15.1 name:TIGR01847; db:TIGRFAMs.hmm|TIGR03949 evalue:3.8e-07 score:28.9 best_domain_score:28.5 name:TIGR03949;
tm_num 1;
16298 16504 transmembrane_helix
ID metaerg.pl|11263
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology o16427-16495i;
16581 16796 CDS
ID metaerg.pl|11264
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__PCC-6802;s__PCC-6802 sp000332175;
genomedb_acc GCF_000332175.1;
genomedb_target db:genomedb|GCF_000332175.1|WP_019501040.1 1 71 evalue:1.1e-12 qcov:100.00 identity:56.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
16982 17236 CDS
ID metaerg.pl|11265
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__PCC-6802;s__PCC-6802 sp000332175;
genomedb_acc GCF_000332175.1;
genomedb_target db:genomedb|GCF_000332175.1|WP_019501039.1 10 82 evalue:2.6e-08 qcov:86.90 identity:39.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
tm_num 2;
16982 17236 transmembrane_helix
ID metaerg.pl|11266
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology i17015-17083o17141-17209i;
17247 18425 CDS
ID metaerg.pl|11267
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Calothrix;s__Calothrix sp002368415;
genomedb_acc GCF_002368415.1;
genomedb_target db:genomedb|GCF_002368415.1|WP_096688633.1 1 390 evalue:3.6e-137 qcov:99.50 identity:63.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF01636; PF01633;
pfam_desc Phosphotransferase enzyme family; Choline/ethanolamine kinase;
pfam_id APH; Choline_kinase;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:2.5e-10 score:39.9 best_domain_score:39.4 name:APH; db:Pfam-A.hmm|PF01633.20 evalue:1.4e-06 score:27.2 best_domain_score:25.9 name:Choline_kinase;
18451 19578 CDS
ID metaerg.pl|11268
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc commune;
genomedb_acc GCF_003113895.1;
genomedb_target db:genomedb|GCF_003113895.1|WP_109013279.1 1 373 evalue:5.5e-135 qcov:99.50 identity:63.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF17914;
pfam_desc HopA1 effector protein family;
pfam_id HopA1;
pfam_target db:Pfam-A.hmm|PF17914.1 evalue:2.7e-58 score:195.7 best_domain_score:195.0 name:HopA1;
19569 20582 CDS
ID metaerg.pl|11269
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc flagelliforme;
genomedb_acc GCF_002813575.1;
genomedb_target db:genomedb|GCF_002813575.1|WP_100897421.1 1 337 evalue:4.3e-147 qcov:100.00 identity:73.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00248;
pfam_desc Aldo/keto reductase family;
pfam_id Aldo_ket_red;
pfam_target db:Pfam-A.hmm|PF00248.21 evalue:3e-07 score:29.2 best_domain_score:22.2 name:Aldo_ket_red;
20679 21416 CDS
ID metaerg.pl|11270
allec_ids 5.2.1.8;
allgo_ids GO:0003755; GO:0030288; GO:0042277; GO:0051082; GO:0043165; GO:0060274; GO:0006457; GO:0050821;
allko_ids K03771;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira sp002368175;
genomedb_acc GCF_002368175.1;
genomedb_target db:genomedb|GCF_002368175.1|WP_096586552.1 1 244 evalue:7.9e-98 qcov:99.60 identity:75.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00639; PF13616;
pfam_desc PPIC-type PPIASE domain; PPIC-type PPIASE domain;
pfam_id Rotamase; Rotamase_3;
pfam_target db:Pfam-A.hmm|PF00639.21 evalue:1e-10 score:41.7 best_domain_score:40.8 name:Rotamase; db:Pfam-A.hmm|PF13616.6 evalue:1.7e-09 score:37.5 best_domain_score:36.7 name:Rotamase_3;
sprot_desc Chaperone SurA;
sprot_id sp|Q6D0E2|SURA_PECAS;
sprot_target db:uniprot_sprot|sp|Q6D0E2|SURA_PECAS 27 213 evalue:2.0e-07 qcov:76.30 identity:25.50;
21685 21500 CDS
ID metaerg.pl|11271
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Coleofasciculaceae;g__Moorea;s__Moorea producens_A;
genomedb_acc GCF_001767235.1;
genomedb_target db:genomedb|GCF_001767235.1|WP_083304955.1 8 61 evalue:8.5e-09 qcov:88.50 identity:63.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
22982 21738 CDS
ID metaerg.pl|11272
allgo_ids GO:0003824; GO:0051536;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__NIES-4103;s__NIES-4103 sp002368335;
genomedb_acc GCF_002368335.1;
genomedb_target db:genomedb|GCF_002368335.1|WP_096553754.1 1 414 evalue:2.1e-228 qcov:100.00 identity:89.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF13353; PF04055;
pfam_desc 4Fe-4S single cluster domain; Radical SAM superfamily;
pfam_id Fer4_12; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF13353.6 evalue:4.7e-06 score:26.2 best_domain_score:25.3 name:Fer4_12; db:Pfam-A.hmm|PF04055.21 evalue:8.5e-19 score:67.8 best_domain_score:62.3 name:Radical_SAM;
tigrfam_acc TIGR04085; TIGR04103;
tigrfam_desc radical SAM additional 4Fe4S-binding SPASM domain; nif11-class peptide radical SAM maturase 3;
tigrfam_name rSAM_more_4Fe4S; rSAM_nif11_3;
tigrfam_target db:TIGRFAMs.hmm|TIGR04085 evalue:1.8e-12 score:46.7 best_domain_score:45.7 name:TIGR04085; db:TIGRFAMs.hmm|TIGR04103 evalue:1.9e-256 score:849.3 best_domain_score:849.2 name:TIGR04103;
23398 23051 CDS
ID metaerg.pl|11273
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira sp002368175;
genomedb_acc GCF_002368175.1;
genomedb_target db:genomedb|GCF_002368175.1|WP_096589591.1 1 113 evalue:1.2e-40 qcov:98.30 identity:72.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF07862;
pfam_desc Nif11 domain;
pfam_id Nif11;
pfam_target db:Pfam-A.hmm|PF07862.11 evalue:3e-14 score:52.3 best_domain_score:51.6 name:Nif11;
tigrfam_acc TIGR03798;
tigrfam_desc nif11-like leader peptide domain;
tigrfam_mainrole Cellular processes;
tigrfam_name ocin_TIGR03798;
tigrfam_sub1role Biosynthesis of natural products;
tigrfam_target db:TIGRFAMs.hmm|TIGR03798 evalue:1.1e-14 score:53.6 best_domain_score:53.1 name:TIGR03798;
23752 23423 CDS
ID metaerg.pl|11274
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092089.1 1 107 evalue:1.0e-44 qcov:98.20 identity:90.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF07862;
pfam_desc Nif11 domain;
pfam_id Nif11;
pfam_target db:Pfam-A.hmm|PF07862.11 evalue:3e-13 score:49.1 best_domain_score:48.5 name:Nif11;
tigrfam_acc TIGR03798;
tigrfam_desc nif11-like leader peptide domain;
tigrfam_mainrole Cellular processes;
tigrfam_name ocin_TIGR03798;
tigrfam_sub1role Biosynthesis of natural products;
tigrfam_target db:TIGRFAMs.hmm|TIGR03798 evalue:3.1e-14 score:52.2 best_domain_score:51.5 name:TIGR03798;
tm_num 1;
23752 23423 transmembrane_helix
ID metaerg.pl|11275
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology i23639-23707o;
24222 23785 CDS
ID metaerg.pl|11276
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092088.1 1 145 evalue:3.1e-73 qcov:100.00 identity:91.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
24522 24268 CDS
ID metaerg.pl|11277
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092087.1 1 81 evalue:1.3e-28 qcov:96.40 identity:87.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
tm_num 1;
24522 24268 transmembrane_helix
ID metaerg.pl|11278
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology i24442-24510o;
25484 26194 CDS
ID metaerg.pl|11279
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195183.1 1 236 evalue:1.4e-120 qcov:100.00 identity:95.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF01936;
pfam_desc NYN domain;
pfam_id NYN;
pfam_target db:Pfam-A.hmm|PF01936.18 evalue:1.2e-34 score:119.1 best_domain_score:118.7 name:NYN;
26310 27014 CDS
ID metaerg.pl|11280
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0000156; GO:0006817; GO:0006355;
allko_ids K02482; K02480; K07638; K07653; K07636; K11527; K07678; K10715; K02668; K03388; K08479; K10916; K02489; K07716; K07640; K07710; K01768; K13761; K11383; K02486; K12767; K04757; K11357; K10125; K07647; K07717; K07675; K07650; K07676; K10681; K06379; K07709; K07644; K11354; K07778; K02575; K07768; K08884; K07711; K02478; K07679; K07648; K07651; K07718; K07654; K07682; K03407; K07637; K07646; K07641; K07673; K01120; K08475; K07639; K07652; K07708; K07677; K10909; K07704; K08282; K01937; K11231; K11711; K07642; K00760; K02484; K11356; K11640; K07657;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092085.1 1 234 evalue:1.7e-126 qcov:100.00 identity:96.60;
kegg_pathway_id 00790; 03090; 04011; 02020; 00240; 00230; 05111; 00983;
kegg_pathway_name Folate biosynthesis; Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General; Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Drug metabolism - other enzymes;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:7.8e-28 score:96.1 best_domain_score:95.3 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:9.2e-27 score:92.2 best_domain_score:90.5 name:Trans_reg_C;
sprot_desc Phosphate regulon transcriptional regulatory protein PhoB;
sprot_id sp|Q52990|PHOB_RHIME;
sprot_target db:uniprot_sprot|sp|Q52990|PHOB_RHIME 3 231 evalue:1.9e-47 qcov:97.90 identity:45.80;
27030 28136 CDS
ID metaerg.pl|11281
allec_ids 2.7.13.3;
allgo_ids GO:0007165; GO:0016021; GO:0005886; GO:0005524; GO:0000155;
allko_ids K02480; K14489; K08801; K02482; K07636; K07653; K07638; K13587; K02030; K11527; K07655; K07678; K10715; K03388; K02668; K10916; K08479; K07674; K07716; K02489; K07697; K01768; K07656; K07710; K07640; K11520; K14509; K07769; K02486; K11383; K12767; K11357; K10125; K11629; K04757; K10942; K13040; K07647; K07717; K07675; K01769; K10681; K07676; K06379; K07650; K13532; K07709; K07644; K11633; K07768; K11354; K07778; K11328; K13533; K08884; K07711; K00873; K07648; K02478; K07679; K07698; K07718; K07651; K07777; K00936; K07682; K07649; K07654; K07637; K03407; K07673; K08475; K07639; K07646; K07641; K13598; K07652; K07677; K07708; K07645; K08282; K07704; K10909; K11231; K07643; K02491; K11711; K07642; K02484; K11640; K11356;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092084.1 1 368 evalue:1.8e-194 qcov:100.00 identity:94.30;
kegg_pathway_id 00620; 03090; 02020; 04011; 00790; 00710; 00010; 00230; 05111;
kegg_pathway_name Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Folate biosynthesis; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Purine metabolism; Vibrio cholerae pathogenic cycle;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00672; PF02518; PF00512;
pfam_desc HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HAMP; HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF00672.25 evalue:7.6e-11 score:41.5 best_domain_score:37.8 name:HAMP; db:Pfam-A.hmm|PF02518.26 evalue:1.6e-29 score:101.9 best_domain_score:100.9 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.7e-15 score:56.0 best_domain_score:54.8 name:HisKA;
sprot_desc Sensor histidine kinase MtrB;
sprot_id sp|Q93CB7|MTRB_MYCPA;
sprot_target db:uniprot_sprot|sp|Q93CB7|MTRB_MYCPA 88 367 evalue:2.7e-40 qcov:76.10 identity:34.10;
tm_num 2;
27030 28136 transmembrane_helix
ID metaerg.pl|11282
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology o27072-27140i27252-27311o;
28695 29024 CDS
ID metaerg.pl|11283
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195182.1 1 109 evalue:5.7e-48 qcov:100.00 identity:88.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
tm_num 3;
28695 29024 transmembrane_helix
ID metaerg.pl|11284
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology i28713-28766o28809-28877i28914-28973o;
29589 30539 CDS
ID metaerg.pl|11285
allec_ids 1.17.1.4;
allgo_ids GO:0004854; GO:0009114;
allko_ids K07402; K00087;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092082.1 1 316 evalue:3.3e-149 qcov:100.00 identity:85.80;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
metacyc_pathway_id P164-PWY; SALVADEHYPOX-PWY; URSIN-PWY; PWY-5497; PWY-6237; PWY-6353; PWY-5695; PWY-5044;
metacyc_pathway_name purine nucleobases degradation I (anaerobic);; adenosine nucleotides degradation II;; ureide biosynthesis;; purine nucleobases degradation II (anaerobic);; ; purine nucleotides degradation II (aerobic);; inosine 5'-phosphate degradation;; purine nucleotides degradation I (plants);;
metacyc_pathway_type Fermentation; Purine-Degradation;; Adenosine-Nucleotides-Degradation;; Polyamine-Biosynthesis; Super-Pathways;; Fermentation; Purine-Degradation;; ; Purine-Degradation; Super-Pathways;; Purine-Degradation;; Purine-Degradation; Super-Pathways;;
pfam_acc PF13478; PF02625;
pfam_desc XdhC Rossmann domain; XdhC and CoxI family;
pfam_id XdhC_C; XdhC_CoxI;
pfam_target db:Pfam-A.hmm|PF13478.6 evalue:1.1e-34 score:118.9 best_domain_score:118.3 name:XdhC_C; db:Pfam-A.hmm|PF02625.16 evalue:4.1e-20 score:71.0 best_domain_score:69.9 name:XdhC_CoxI;
sprot_desc Probable xanthine dehydrogenase subunit A;
sprot_id sp|O32147|XDHA_BACSU;
sprot_target db:uniprot_sprot|sp|O32147|XDHA_BACSU 14 305 evalue:3.5e-28 qcov:92.40 identity:29.00;
30562 31194 CDS
ID metaerg.pl|11286
allko_ids K02536; K04042; K11528;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093979.1 16 210 evalue:3.0e-90 qcov:92.90 identity:85.10;
kegg_pathway_id 00530; 00540;
kegg_pathway_name Aminosugars metabolism; Lipopolysaccharide biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF12804;
pfam_desc MobA-like NTP transferase domain;
pfam_id NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF12804.7 evalue:2.7e-25 score:88.8 best_domain_score:88.5 name:NTP_transf_3;
31639 31142 CDS
ID metaerg.pl|11287
allgo_ids GO:0000256; GO:0050385;
allko_ids K01483;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195180.1 1 165 evalue:1.6e-86 qcov:100.00 identity:90.90;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF04115;
pfam_desc Ureidoglycolate lyase;
pfam_id Ureidogly_lyase;
pfam_target db:Pfam-A.hmm|PF04115.12 evalue:2.4e-09 score:36.5 best_domain_score:22.6 name:Ureidogly_lyase;
31730 32725 CDS
ID metaerg.pl|11288
allec_ids 2.7.7.7;
allgo_ids GO:0003677; GO:0003887; GO:0006260; GO:0009360;
allko_ids K02340;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092080.1 1 331 evalue:5.4e-174 qcov:100.00 identity:94.30;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF06144;
pfam_desc DNA polymerase III, delta subunit;
pfam_id DNA_pol3_delta;
pfam_target db:Pfam-A.hmm|PF06144.13 evalue:9.6e-42 score:141.9 best_domain_score:139.3 name:DNA_pol3_delta;
tigrfam_acc TIGR01128;
tigrfam_desc DNA polymerase III, delta subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name holA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01128 evalue:2.2e-56 score:190.6 best_domain_score:190.3 name:TIGR01128;
32830 33300 CDS
ID metaerg.pl|11289
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092079.1 1 156 evalue:5.2e-71 qcov:100.00 identity:89.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF13767;
pfam_desc Domain of unknown function (DUF4168);
pfam_id DUF4168;
pfam_target db:Pfam-A.hmm|PF13767.6 evalue:8.1e-29 score:99.9 best_domain_score:99.6 name:DUF4168;
sp YES;
32830 32961 signal_peptide
ID metaerg.pl|11290
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
35028 33751 CDS
ID metaerg.pl|11291
allec_ids 2.7.7.-;
allgo_ids GO:0003723; GO:0006396; GO:0016779; GO:0005524; GO:0052929; GO:0052928; GO:0052927;
allko_ids K05847; K00974;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092099.1 1 425 evalue:1.2e-205 qcov:100.00 identity:86.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
metacyc_pathway_id PWY-5354; PWY-882; THISYN-PWY; PHOSLIPSYN2-PWY; PWY4FS-4; PWY-6476;
metacyc_pathway_name ; L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of thiamine diphosphate biosynthesis I;; superpathway of phospholipid biosynthesis II (plants);; phosphatidylcholine biosynthesis IV;; cytidylyl molybdenum cofactor biosynthesis;;
metacyc_pathway_type ; Ascorbate-Biosynthesis;; Super-Pathways; Thiamine-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; PhosphatidylcholineBiosynthesis;; Cofactor-Biosynthesis;;
pfam_acc PF01743; PF12627; PF13735;
pfam_desc Poly A polymerase head domain; Probable RNA and SrmB- binding site of polymerase A; tRNA nucleotidyltransferase domain 2 putative;
pfam_id PolyA_pol; PolyA_pol_RNAbd; tRNA_NucTran2_2;
pfam_target db:Pfam-A.hmm|PF01743.20 evalue:1.8e-22 score:79.3 best_domain_score:70.3 name:PolyA_pol; db:Pfam-A.hmm|PF12627.7 evalue:5.6e-13 score:47.7 best_domain_score:46.3 name:PolyA_pol_RNAbd; db:Pfam-A.hmm|PF13735.6 evalue:1.9e-14 score:53.1 best_domain_score:51.9 name:tRNA_NucTran2_2;
sprot_desc CC-adding tRNA nucleotidyltransferase;
sprot_id sp|Q55428|CATNT_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55428|CATNT_SYNY3 17 422 evalue:3.3e-90 qcov:95.50 identity:47.30;
35113 35361 CDS
ID metaerg.pl|11292
allgo_ids GO:0009507;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092100.1 1 82 evalue:4.6e-42 qcov:100.00 identity:97.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF10718;
pfam_desc Hypothetical chloroplast protein Ycf34;
pfam_id Ycf34;
pfam_target db:Pfam-A.hmm|PF10718.9 evalue:1.8e-40 score:136.8 best_domain_score:136.6 name:Ycf34;
sprot_desc hypothetical protein;
sprot_id sp|Q1XDQ8|YCF34_PYRYE;
sprot_target db:uniprot_sprot|sp|Q1XDQ8|YCF34_PYRYE 1 72 evalue:1.0e-16 qcov:87.80 identity:45.80;
35599 36258 CDS
ID metaerg.pl|11293
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195198.1 1 218 evalue:7.8e-113 qcov:99.50 identity:94.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00814;
pfam_desc Glycoprotease family;
pfam_id Peptidase_M22;
pfam_target db:Pfam-A.hmm|PF00814.25 evalue:8.7e-14 score:51.1 best_domain_score:50.8 name:Peptidase_M22;
tigrfam_acc TIGR03725;
tigrfam_desc tRNA threonylcarbamoyl adenosine modification protein YeaZ;
tigrfam_mainrole Protein synthesis;
tigrfam_name T6A_YeaZ;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03725 evalue:4.5e-36 score:124.0 best_domain_score:123.6 name:TIGR03725;
36545 36874 CDS
ID metaerg.pl|11294
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092102.1 1 109 evalue:3.8e-52 qcov:100.00 identity:94.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
36867 37973 CDS
ID metaerg.pl|11295
allgo_ids GO:0043565;
allko_ids K00558;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092103.1 1 368 evalue:3.6e-211 qcov:100.00 identity:98.10;
kegg_pathway_id 00271;
kegg_pathway_name Methionine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF01381; PF06114;
pfam_desc Helix-turn-helix; IrrE N-terminal-like domain;
pfam_id HTH_3; Peptidase_M78;
pfam_target db:Pfam-A.hmm|PF01381.22 evalue:2.6e-10 score:39.5 best_domain_score:33.8 name:HTH_3; db:Pfam-A.hmm|PF06114.13 evalue:2.5e-09 score:36.4 best_domain_score:34.8 name:Peptidase_M78;
tigrfam_acc TIGR02607;
tigrfam_desc addiction module antidote protein, HigA family;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name antidote_HigA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02607 evalue:7.9e-14 score:50.4 best_domain_score:47.2 name:TIGR02607;
39366 38083 CDS
ID metaerg.pl|11296
allec_ids 2.6.1.11;
allgo_ids GO:0008483; GO:0030170; GO:0005737; GO:0003992; GO:0006526;
allko_ids K00821; K00818; K05830;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093983.1 1 427 evalue:4.4e-237 qcov:100.00 identity:95.10;
kegg_pathway_id 00300; 00220;
kegg_pathway_name Lysine biosynthesis; Urea cycle and metabolism of amino groups;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
metacyc_pathway_id GLUTORN-PWY; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; PWY-5154; ARGSYN-PWY;
metacyc_pathway_name L-ornithine biosynthesis I;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type L-Ornithine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:2.4e-119 score:397.8 best_domain_score:397.6 name:Aminotran_3;
sprot_desc Acetylornithine aminotransferase;
sprot_id sp|P54752|ARGD_NOSS1;
sprot_target db:uniprot_sprot|sp|P54752|ARGD_NOSS1 1 427 evalue:2.4e-221 qcov:100.00 identity:86.20;
tigrfam_acc TIGR00707;
tigrfam_desc transaminase, acetylornithine/succinylornithine family;
tigrfam_name argD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00707 evalue:6.1e-162 score:537.9 best_domain_score:537.7 name:TIGR00707;
39518 40582 CDS
ID metaerg.pl|11297
allgo_ids GO:0006813; GO:0008324; GO:0016021; GO:0005886; GO:0005267;
allko_ids K02030; K10716;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092104.1 1 353 evalue:4.5e-179 qcov:99.70 identity:91.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF07885; PF02080; PF02254;
pfam_desc Ion channel; TrkA-C domain; TrkA-N domain;
pfam_id Ion_trans_2; TrkA_C; TrkA_N;
pfam_target db:Pfam-A.hmm|PF07885.16 evalue:3.5e-16 score:58.2 best_domain_score:57.3 name:Ion_trans_2; db:Pfam-A.hmm|PF02080.21 evalue:2.7e-13 score:48.8 best_domain_score:47.6 name:TrkA_C; db:Pfam-A.hmm|PF02254.18 evalue:3.3e-32 score:110.4 best_domain_score:109.7 name:TrkA_N;
sprot_desc Probable potassium channel protein 2;
sprot_id sp|Q58752|MJK2_METJA;
sprot_target db:uniprot_sprot|sp|Q58752|MJK2_METJA 14 340 evalue:4.6e-53 qcov:92.40 identity:34.10;
tm_num 3;
39518 40582 transmembrane_helix
ID metaerg.pl|11298
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology i39563-39622o39650-39709i39728-39781o;
41559 40579 CDS
ID metaerg.pl|11299
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195208.1 1 326 evalue:4.3e-176 qcov:100.00 identity:90.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF11927;
pfam_desc Protein of unknown function (DUF3445);
pfam_id DUF3445;
pfam_target db:Pfam-A.hmm|PF11927.8 evalue:5.6e-46 score:156.2 best_domain_score:155.9 name:DUF3445;
42135 41569 CDS
ID metaerg.pl|11300
allgo_ids GO:0009235;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092106.1 1 180 evalue:1.1e-94 qcov:95.70 identity:93.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF10229;
pfam_desc Methylmalonic aciduria and homocystinuria type D protein;
pfam_id MMADHC;
pfam_target db:Pfam-A.hmm|PF10229.9 evalue:1.2e-13 score:50.6 best_domain_score:50.1 name:MMADHC;
tm_num 1;
42135 41569 transmembrane_helix
ID metaerg.pl|11301
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology i42001-42069o;
42757 44256 CDS
ID metaerg.pl|11302
allec_ids 1.2.1.3;
allgo_ids GO:0016491; GO:0055114; GO:0004029; GO:0043878; GO:0006081;
allko_ids K09472; K14085; K00294; K00151; K00128; K13821; K10217; K00130; K00318; K00155;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira carneum;
genomedb_acc GCF_002368155.1;
genomedb_target db:genomedb|GCF_002368155.1|WP_096727791.1 1 498 evalue:4.7e-230 qcov:99.80 identity:78.70;
kegg_pathway_id 00260; 00010; 00624; 00310; 00280; 00281; 00622; 00626; 00071; 00340; 00631; 00410; 00251; 00120; 00380; 00641; 00640; 00650; 00350; 00362; 00561; 00620; 00330; 00903; 00220;
kegg_pathway_name Glycine, serine and threonine metabolism; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Toluene and xylene degradation; Naphthalene and anthracene degradation; Fatty acid metabolism; Histidine metabolism; 1,2-Dichloroethane degradation; beta-Alanine metabolism; Glutamate metabolism; Bile acid biosynthesis; Tryptophan metabolism; 3-Chloroacrylic acid degradation; Propanoate metabolism; Butanoate metabolism; Tyrosine metabolism; Benzoate degradation via hydroxylation; Glycerolipid metabolism; Pyruvate metabolism; Arginine and proline metabolism; Limonene and pinene degradation; Urea cycle and metabolism of amino groups;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
metacyc_pathway_id PWY66-21; PWY-0; PWY-6054; PWY-2221; PWY-5760; PWY-2724; PWY66-161; PWY66-162; P221-PWY; PWY-6575; PWY-6055; NPGLUCAT-PWY; PWY-2501; PWY-3981;
metacyc_pathway_name ethanol degradation II;; putrescine degradation III;; dimethylsulfoniopropanoate biosynthesis I (Wollastonia);; Entner-Doudoroff pathway III (semi-phosphorylative);; β-alanine biosynthesis IV;; alkane oxidation;; ethanol degradation III;; ethanol degradation IV;; octane oxidation;; juvenile hormone III biosynthesis I;; dimethylsulfoniopropanoate biosynthesis II (Spartina);; Entner-Doudoroff pathway II (non-phosphorylative);; fatty acid α-oxidation I;; β-alanine biosynthesis I;;
metacyc_pathway_type Ethanol-Degradation;; Putrescine-Degradation;; Dimethylsulfoniopropionate-Biosynthesis;; Entner-Duodoroff-Pathways;; Beta-Alanine-Biosynthesis;; Fatty-Acid-Degradation;; Ethanol-Degradation;; Ethanol-Degradation;; Other-Degradation;; HORMONE-SYN; JH-III-Biosynthesis;; Dimethylsulfoniopropionate-Biosynthesis;; Entner-Duodoroff-Pathways;; Fatty-Acid-Degradation;; Beta-Alanine-Biosynthesis;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:5.1e-178 score:591.5 best_domain_score:591.4 name:Aldedh;
sprot_desc Putative aldehyde dehydrogenase DhaS;
sprot_id sp|O34660|ALDH4_BACSU;
sprot_target db:uniprot_sprot|sp|O34660|ALDH4_BACSU 1 499 evalue:1.8e-111 qcov:100.00 identity:41.40;
44520 44314 CDS
ID metaerg.pl|11303
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092107.1 1 68 evalue:3.0e-31 qcov:100.00 identity:94.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
45374 44625 CDS
ID metaerg.pl|11304
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016021; GO:0005886; GO:0016887; GO:0015562; GO:0015893; GO:0046677;
allko_ids K09810; K11072; K02068; K02045; K06861; K02071; K01996; K11084; K02032; K02017; K02010; K05847; K01997; K02003; K02004; K02006; K02052; K02000; K11962; K09812; K01990; K10000; K02023; K02018; K10235; K05816; K11076; K02049; K01995; K02065; K10111; K10112; K01998; K02031;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195212.1 1 249 evalue:1.4e-126 qcov:100.00 identity:95.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6171; PWY-6135; PWY-6166; PWY-6188;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1e-09 score:37.9 best_domain_score:19.7 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2e-34 score:118.3 best_domain_score:117.9 name:ABC_tran;
sprot_desc Macrolide export ATP-binding/permease protein MacB;
sprot_id sp|Q2EHL8|MACB_AGGAC;
sprot_target db:uniprot_sprot|sp|Q2EHL8|MACB_AGGAC 20 238 evalue:4.4e-42 qcov:88.00 identity:44.50;
tigrfam_acc TIGR02982;
tigrfam_desc ABC exporter ATP-binding subunit, DevA family;
tigrfam_name heterocyst_DevA;
tigrfam_target db:TIGRFAMs.hmm|TIGR02982 evalue:6.3e-116 score:384.7 best_domain_score:384.5 name:TIGR02982;
46576 45410 CDS
ID metaerg.pl|11305
allgo_ids GO:0016020;
allko_ids K02004;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_042201837.1 1 388 evalue:3.1e-205 qcov:100.00 identity:94.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF02687;
pfam_desc FtsX-like permease family;
pfam_id FtsX;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:2.9e-11 score:42.9 best_domain_score:41.1 name:FtsX;
tigrfam_acc TIGR01185;
tigrfam_desc ABC exporter transmembrane subunit, DevC protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name devC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01185 evalue:5.2e-151 score:502.1 best_domain_score:501.9 name:TIGR01185;
tm_num 4;
46576 45410 transmembrane_helix
ID metaerg.pl|11306
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology i45470-45538o46196-46264i46343-46411o46469-46537i;
47942 46653 CDS
ID metaerg.pl|11307
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092109.1 1 429 evalue:1.1e-203 qcov:100.00 identity:93.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00364; PF13533; PF13437; PF16576;
pfam_desc Biotin-requiring enzyme; Biotin-lipoyl like; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl; Biotin_lipoyl_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:1.1e-06 score:27.6 best_domain_score:13.6 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:1.5e-10 score:40.0 best_domain_score:40.0 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:1.9e-08 score:34.2 best_domain_score:34.2 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:2.6e-09 score:35.9 best_domain_score:31.9 name:HlyD_D23;
sp YES;
tigrfam_acc TIGR02971;
tigrfam_desc ABC exporter membrane fusion protein, DevB family;
tigrfam_name heterocyst_DevB;
tigrfam_target db:TIGRFAMs.hmm|TIGR02971 evalue:4.6e-99 score:331.0 best_domain_score:325.4 name:TIGR02971;
tm_num 1;
46653 46748 signal_peptide
ID metaerg.pl|11308
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
47942 46653 transmembrane_helix
ID metaerg.pl|11309
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology i46689-46757o;
48601 48029 CDS
ID metaerg.pl|11310
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092110.1 1 190 evalue:4.7e-90 qcov:100.00 identity:86.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00440;
pfam_desc Bacterial regulatory proteins, tetR family;
pfam_id TetR_N;
pfam_target db:Pfam-A.hmm|PF00440.23 evalue:1.5e-17 score:62.4 best_domain_score:61.5 name:TetR_N;
50146 48938 CDS
ID metaerg.pl|11311
allec_ids 5.1.3.34;
allgo_ids GO:0005506; GO:0008610; GO:0016491; GO:0055114; GO:0016021; GO:0016857; GO:0006071; GO:0006629; GO:0015979;
allko_ids K20024;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092111.1 1 402 evalue:1.1e-221 qcov:100.00 identity:96.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00106; PF04116; PF13460; PF02882;
pfam_desc short chain dehydrogenase; Fatty acid hydroxylase superfamily; NAD(P)H-binding ; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain;
pfam_id adh_short; FA_hydroxylase; NAD_binding_10; THF_DHG_CYH_C;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:1e-09 score:37.4 best_domain_score:34.5 name:adh_short; db:Pfam-A.hmm|PF04116.13 evalue:9.5e-09 score:34.9 best_domain_score:33.9 name:FA_hydroxylase; db:Pfam-A.hmm|PF13460.6 evalue:3.9e-08 score:32.6 best_domain_score:32.1 name:NAD_binding_10; db:Pfam-A.hmm|PF02882.19 evalue:4.3e-05 score:22.1 best_domain_score:21.5 name:THF_DHG_CYH_C;
sprot_desc Monoglucosyldiacylglycerol epimerase;
sprot_id sp|P74167|MGDE_SYNY3;
sprot_target db:uniprot_sprot|sp|P74167|MGDE_SYNY3 18 398 evalue:1.4e-103 qcov:94.80 identity:53.50;
tm_num 2;
50146 48938 transmembrane_helix
ID metaerg.pl|11312
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology i48950-49018o49223-49291i;
50798 51028 CDS
ID metaerg.pl|11313
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092112.1 1 76 evalue:1.8e-32 qcov:100.00 identity:94.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF04255;
pfam_desc Protein of unknown function (DUF433);
pfam_id DUF433;
pfam_target db:Pfam-A.hmm|PF04255.14 evalue:4.2e-28 score:96.2 best_domain_score:95.9 name:DUF433;
51025 51399 CDS
ID metaerg.pl|11314
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092113.1 1 124 evalue:2.4e-58 qcov:100.00 identity:92.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF18480; PF18478;
pfam_desc Domain of unknown function (DUF5615); PIN like domain;
pfam_id DUF5615; PIN_10;
pfam_target db:Pfam-A.hmm|PF18480.1 evalue:2.5e-22 score:77.7 best_domain_score:77.1 name:DUF5615; db:Pfam-A.hmm|PF18478.1 evalue:8.4e-08 score:31.6 best_domain_score:29.0 name:PIN_10;
52252 51731 CDS
ID metaerg.pl|11315
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
52818 52747 tRNA
ID metaerg.pl|11316
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
name tRNA_Cys_gca;
53181 53993 CDS
ID metaerg.pl|11317
allec_ids 3.1.4.53;
allgo_ids GO:0016787; GO:0004115; GO:0046872; GO:0000166;
allko_ids K01120; K03651;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093985.1 6 270 evalue:1.9e-145 qcov:98.10 identity:94.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:1.3e-18 score:67.5 best_domain_score:67.1 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:8.8e-11 score:41.5 best_domain_score:40.4 name:Metallophos_2;
sprot_desc 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA;
sprot_id sp|Q8YLG0|CPDA_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YLG0|CPDA_NOSS1 6 270 evalue:1.4e-102 qcov:98.10 identity:65.70;
54610 53999 CDS
ID metaerg.pl|11318
allec_ids 4.-.-.-;
allgo_ids GO:0016829; GO:0017009;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092115.1 8 203 evalue:2.2e-98 qcov:96.60 identity:88.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
metacyc_pathway_id PWY1A0-6325;
metacyc_pathway_name actinorhodin biosynthesis;;
metacyc_pathway_type Antibiotic-Biosynthesis;;
pfam_acc PF06206;
pfam_desc CpeT/CpcT family (DUF1001);
pfam_id CpeT;
pfam_target db:Pfam-A.hmm|PF06206.11 evalue:1.5e-69 score:232.9 best_domain_score:232.7 name:CpeT;
sprot_desc Phycocyanobilin lyase CpcT;
sprot_id sp|Q8YLF9|CPCT_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YLF9|CPCT_NOSS1 4 202 evalue:5.8e-93 qcov:98.00 identity:82.40;
54753 55967 CDS
ID metaerg.pl|11319
allgo_ids GO:0005515;
allko_ids K08884;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093986.1 1 403 evalue:1.7e-193 qcov:99.80 identity:89.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00515; PF13424; PF13176; PF17874;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; MalT-like TPR region;
pfam_id TPR_1; TPR_12; TPR_7; TPR_MalT;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:3.1e-07 score:29.2 best_domain_score:18.0 name:TPR_1; db:Pfam-A.hmm|PF13424.6 evalue:1.7e-13 score:49.9 best_domain_score:26.9 name:TPR_12; db:Pfam-A.hmm|PF13176.6 evalue:3.5e-07 score:29.0 best_domain_score:13.9 name:TPR_7; db:Pfam-A.hmm|PF17874.1 evalue:1.7e-09 score:36.8 best_domain_score:24.4 name:TPR_MalT;
sp YES;
54753 54824 signal_peptide
ID metaerg.pl|11320
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
57458 56193 CDS
ID metaerg.pl|11321
allko_ids K00712; K12989; K00749; K08256; K13677; K13003; K00703; K02840; K12996; K13668; K03429; K02844; K12583; K03844;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092116.1 1 420 evalue:6.0e-239 qcov:99.80 identity:95.20;
kegg_pathway_id 00561; 01031; 00540; 00500; 01030; 00510;
kegg_pathway_name Glycerolipid metabolism; Glycan structures - biosynthesis 2; Lipopolysaccharide biosynthesis; Starch and sucrose metabolism; Glycan structures - biosynthesis 1; N-Glycan biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00534; PF13439; PF13524; PF13692;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1; Glycosyl transferases group 1;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_2; Glyco_trans_1_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:1.1e-32 score:112.1 best_domain_score:111.6 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:7.9e-07 score:28.5 best_domain_score:27.6 name:Glyco_transf_4; db:Pfam-A.hmm|PF13524.6 evalue:3.3e-07 score:29.8 best_domain_score:28.9 name:Glyco_trans_1_2; db:Pfam-A.hmm|PF13692.6 evalue:4.1e-28 score:97.7 best_domain_score:97.0 name:Glyco_trans_1_4;
58798 57536 CDS
ID metaerg.pl|11322
allgo_ids GO:0016757;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092117.1 1 420 evalue:3.8e-209 qcov:100.00 identity:84.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00535; PF13641; PF13506; PF13632;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family 21; Glycosyl transferase family group 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3; Glyco_transf_21; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:4.8e-10 score:38.7 best_domain_score:38.1 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:3.5e-15 score:55.7 best_domain_score:55.2 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13506.6 evalue:1.7e-17 score:62.6 best_domain_score:62.0 name:Glyco_transf_21; db:Pfam-A.hmm|PF13632.6 evalue:4.5e-10 score:39.0 best_domain_score:37.9 name:Glyco_trans_2_3;
tm_num 4;
58798 57536 transmembrane_helix
ID metaerg.pl|11323
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology o57545-57613i58370-58438o58466-58534i58592-58660o;
60277 59018 CDS
ID metaerg.pl|11324
allgo_ids GO:0016757;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092118.1 1 419 evalue:1.4e-227 qcov:100.00 identity:94.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00535; PF13641; PF13506; PF13632;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family 21; Glycosyl transferase family group 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3; Glyco_transf_21; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.2e-10 score:40.7 best_domain_score:40.1 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:9.9e-17 score:60.8 best_domain_score:60.3 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13506.6 evalue:4.7e-15 score:54.7 best_domain_score:54.1 name:Glyco_transf_21; db:Pfam-A.hmm|PF13632.6 evalue:3.6e-10 score:39.3 best_domain_score:39.3 name:Glyco_trans_2_3;
tm_num 4;
60277 59018 transmembrane_helix
ID metaerg.pl|11325
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology i59036-59104o59861-59929i59948-60016o60092-60160i;
61027 60563 CDS
ID metaerg.pl|11326
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092119.1 1 154 evalue:1.6e-59 qcov:100.00 identity:78.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF09912;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2141);
pfam_id DUF2141;
pfam_target db:Pfam-A.hmm|PF09912.9 evalue:4.3e-32 score:109.6 best_domain_score:109.3 name:DUF2141;
sp YES;
60563 60640 signal_peptide
ID metaerg.pl|11327
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
62072 61071 CDS
ID metaerg.pl|11328
allko_ids K00698; K13005; K12987; K12997; K12983; K12992; K00694;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092120.1 1 327 evalue:2.5e-171 qcov:98.20 identity:89.90;
kegg_pathway_id 00530; 00500;
kegg_pathway_name Aminosugars metabolism; Starch and sucrose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00535; PF10111; PF13641;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyltransferase like family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_2; Glyco_tranf_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:3.2e-30 score:104.4 best_domain_score:103.8 name:Glycos_transf_2; db:Pfam-A.hmm|PF10111.9 evalue:3.4e-09 score:35.8 best_domain_score:35.5 name:Glyco_tranf_2_2; db:Pfam-A.hmm|PF13641.6 evalue:1.7e-07 score:30.6 best_domain_score:30.2 name:Glyco_tranf_2_3;
63107 62118 CDS
ID metaerg.pl|11329
allec_ids 5.1.3.2;
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114; GO:0003978; GO:0006012;
allko_ids K00356; K03953; K00143; K00329; K01784;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092121.1 1 329 evalue:2.4e-174 qcov:100.00 identity:94.80;
kegg_pathway_id 05012; 00130; 00190; 00300; 00052; 00310; 00520;
kegg_pathway_name Parkinson's disease; Ubiquinone biosynthesis; Oxidative phosphorylation; Lysine biosynthesis; Galactose metabolism; Lysine degradation; Nucleotide sugars metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
metacyc_pathway_id PWY-6317; PWY-6404; PWY-5114; PWY-6397; COLANSYN-PWY; PWY-3821;
metacyc_pathway_name D-galactose degradation I (Leloir pathway);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; UDP-sugars interconversion;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; colanic acid building blocks biosynthesis;; D-galactose detoxification;;
metacyc_pathway_type GALACTOSE-DEGRADATION;; Cell-Wall-Biosynthesis; Super-Pathways;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; Cell-Wall-Biosynthesis;; Carbohydrates-Biosynthesis; Super-Pathways;; Detoxification;;
pfam_acc PF01073; PF01370; PF16363; PF13460; PF07993; PF05368; PF02719; PF04321;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; GDP-mannose 4,6 dehydratase; NAD(P)H-binding ; Male sterility protein; NmrA-like family; Polysaccharide biosynthesis protein; RmlD substrate binding domain;
pfam_id 3Beta_HSD; Epimerase; GDP_Man_Dehyd; NAD_binding_10; NAD_binding_4; NmrA; Polysacc_synt_2; RmlD_sub_bind;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:1.8e-24 score:85.4 best_domain_score:85.2 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:3.9e-26 score:91.2 best_domain_score:90.9 name:Epimerase; db:Pfam-A.hmm|PF16363.5 evalue:3.3e-15 score:55.6 best_domain_score:55.3 name:GDP_Man_Dehyd; db:Pfam-A.hmm|PF13460.6 evalue:1.5e-11 score:43.8 best_domain_score:43.2 name:NAD_binding_10; db:Pfam-A.hmm|PF07993.12 evalue:1.6e-12 score:46.4 best_domain_score:45.8 name:NAD_binding_4; db:Pfam-A.hmm|PF05368.13 evalue:8.8e-07 score:27.9 best_domain_score:26.8 name:NmrA; db:Pfam-A.hmm|PF02719.15 evalue:3e-07 score:29.1 best_domain_score:28.2 name:Polysacc_synt_2; db:Pfam-A.hmm|PF04321.17 evalue:8e-10 score:37.5 best_domain_score:37.0 name:RmlD_sub_bind;
sprot_desc UDP-glucose 4-epimerase;
sprot_id sp|P9WN66|GALE_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WN66|GALE_MYCTO 9 325 evalue:1.5e-10 qcov:96.40 identity:24.90;
64513 63335 CDS
ID metaerg.pl|11330
allgo_ids GO:0016020;
allko_ids K02004;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092122.1 1 392 evalue:1.2e-204 qcov:100.00 identity:94.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF02687;
pfam_desc FtsX-like permease family;
pfam_id FtsX;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:3.9e-06 score:26.5 best_domain_score:26.5 name:FtsX;
tigrfam_acc TIGR01185;
tigrfam_desc ABC exporter transmembrane subunit, DevC protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name devC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01185 evalue:7.9e-140 score:465.3 best_domain_score:465.1 name:TIGR01185;
tm_num 5;
64513 63335 transmembrane_helix
ID metaerg.pl|11331
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology o63392-63451i64139-64207o64217-64285i64304-64372o64415-64474i;
65952 64720 CDS
ID metaerg.pl|11332
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092123.1 1 410 evalue:1.1e-189 qcov:100.00 identity:89.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00364; PF13533; PF13437; PF16576;
pfam_desc Biotin-requiring enzyme; Biotin-lipoyl like; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl; Biotin_lipoyl_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF00364.22 evalue:5.4e-05 score:22.2 best_domain_score:15.2 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:4.5e-06 score:25.6 best_domain_score:25.6 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:3.3e-10 score:39.9 best_domain_score:37.3 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:5.4e-16 score:57.7 best_domain_score:50.5 name:HlyD_D23;
sp YES;
tigrfam_acc TIGR02971;
tigrfam_desc ABC exporter membrane fusion protein, DevB family;
tigrfam_name heterocyst_DevB;
tigrfam_target db:TIGRFAMs.hmm|TIGR02971 evalue:3.3e-121 score:403.8 best_domain_score:403.6 name:TIGR02971;
tm_num 1;
64720 64827 signal_peptide
ID metaerg.pl|11333
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
65952 64720 transmembrane_helix
ID metaerg.pl|11334
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
topology i64756-64824o;
66493 67824 CDS
ID metaerg.pl|11335
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092125.1 1 443 evalue:1.7e-236 qcov:100.00 identity:95.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF02195;
pfam_desc ParB-like nuclease domain;
pfam_id ParBc;
pfam_target db:Pfam-A.hmm|PF02195.18 evalue:1.8e-14 score:53.0 best_domain_score:51.9 name:ParBc;
68664 68942 CDS
ID metaerg.pl|11336
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196632.1 1 92 evalue:1.8e-42 qcov:100.00 identity:97.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
69181 74460 CDS
ID metaerg.pl|11337
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092127.1 1 1759 evalue:0.0e+00 qcov:100.00 identity:93.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00698; PF16197; PF00109; PF02801; PF00550;
pfam_desc Acyl transferase domain; Ketoacyl-synthetase C-terminal extension; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Phosphopantetheine attachment site;
pfam_id Acyl_transf_1; KAsynt_C_assoc; ketoacyl-synt; Ketoacyl-synt_C; PP-binding;
pfam_target db:Pfam-A.hmm|PF00698.21 evalue:2.6e-32 score:111.8 best_domain_score:110.6 name:Acyl_transf_1; db:Pfam-A.hmm|PF16197.5 evalue:1.3e-14 score:53.9 best_domain_score:51.6 name:KAsynt_C_assoc; db:Pfam-A.hmm|PF00109.26 evalue:4.9e-76 score:254.9 best_domain_score:253.7 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:2.7e-40 score:136.3 best_domain_score:135.2 name:Ketoacyl-synt_C; db:Pfam-A.hmm|PF00550.25 evalue:5.7e-17 score:61.1 best_domain_score:30.0 name:PP-binding;
tigrfam_acc TIGR02813;
tigrfam_desc polyketide-type polyunsaturated fatty acid synthase PfaA;
tigrfam_name omega_3_PfaA;
tigrfam_target db:TIGRFAMs.hmm|TIGR02813 evalue:0 score:1830.0 best_domain_score:1541.2 name:TIGR02813;
74660 76378 CDS
ID metaerg.pl|11338
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092128.1 1 572 evalue:0.0e+00 qcov:100.00 identity:96.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF00106; PF08659; PF14765;
pfam_desc short chain dehydrogenase; KR domain; Polyketide synthase dehydratase;
pfam_id adh_short; KR; PS-DH;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:1.9e-09 score:36.5 best_domain_score:29.9 name:adh_short; db:Pfam-A.hmm|PF08659.10 evalue:7.1e-38 score:129.5 best_domain_score:128.6 name:KR; db:Pfam-A.hmm|PF14765.6 evalue:1.4e-30 score:105.8 best_domain_score:105.2 name:PS-DH;
76627 80067 CDS
ID metaerg.pl|11339
allgo_ids GO:0004315; GO:0006633;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092129.1 1 1147 evalue:0.0e+00 qcov:100.00 identity:96.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 71.5562; 0.00365375; 0.0183688; 71.5911; 0.0128632;
pfam_acc PF08545; PF16197; PF00109; PF02801;
pfam_desc 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; Ketoacyl-synthetase C-terminal extension; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain;
pfam_id ACP_syn_III; KAsynt_C_assoc; ketoacyl-synt; Ketoacyl-synt_C;
pfam_target db:Pfam-A.hmm|PF08545.10 evalue:0.00016 score:20.7 best_domain_score:9.3 name:ACP_syn_III; db:Pfam-A.hmm|PF16197.5 evalue:1.7e-20 score:72.8 best_domain_score:40.0 name:KAsynt_C_assoc; db:Pfam-A.hmm|PF00109.26 evalue:1.4e-92 score:309.1 best_domain_score:165.4 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:2.5e-61 score:204.2 best_domain_score:119.9 name:Ketoacyl-synt_C;
>Feature NODE_85_length_79793_cov_35.7845
1594 350 CDS
ID metaerg.pl|11340
allec_ids 3.5.3.6;
allgo_ids GO:0005737; GO:0016990; GO:0019547;
allko_ids K01478;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725410.1 1 414 evalue:2.7e-183 qcov:100.00 identity:78.70;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metacyc_pathway_id ARGDEGRAD-PWY; ARGORNPROST-PWY; PWY-4981;
metacyc_pathway_name L-arginine degradation V (arginine deiminase pathway);; L-arginine degradation (Stickland reaction);; L-proline biosynthesis II (from arginine);;
metacyc_pathway_type ARGININE-DEG; Super-Pathways;; ARGININE-DEG; Super-Pathways;; PROLINE-SYN;;
pfam_acc PF02274;
pfam_desc Amidinotransferase;
pfam_id Amidinotransf;
pfam_target db:Pfam-A.hmm|PF02274.17 evalue:1e-60 score:204.9 best_domain_score:204.2 name:Amidinotransf;
sprot_desc Arginine deiminase;
sprot_id sp|O86131|ARCA_BACLD;
sprot_target db:uniprot_sprot|sp|O86131|ARCA_BACLD 1 412 evalue:9.8e-55 qcov:99.50 identity:33.90;
1706 1620 tRNA
ID metaerg.pl|11341
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
name tRNA_Leu_taa;
1860 1787 tRNA
ID metaerg.pl|11342
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
name tRNA_Cys_gca;
2056 1981 tRNA
ID metaerg.pl|11343
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
name tRNA_Gly_gcc;
2230 4872 CDS
ID metaerg.pl|11344
allgo_ids GO:0000271; GO:0016021;
allko_ids K13693; K12992; K00729; K00694; K00721; K00710; K00698; K12997;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725407.1 1 880 evalue:0.0e+00 qcov:100.00 identity:67.00;
kegg_pathway_id 00530; 01030; 00500; 00510;
kegg_pathway_name Aminosugars metabolism; Glycan structures - biosynthesis 1; Starch and sucrose metabolism; N-Glycan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00535; PF13641; PF04138; PF13231;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; GtrA-like protein; Dolichyl-phosphate-mannose-protein mannosyltransferase;
pfam_id Glycos_transf_2; Glyco_tranf_2_3; GtrA; PMT_2;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:2.8e-28 score:98.1 best_domain_score:97.3 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:5e-10 score:38.9 best_domain_score:38.0 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF04138.14 evalue:6.6e-19 score:67.5 best_domain_score:67.5 name:GtrA; db:Pfam-A.hmm|PF13231.6 evalue:8.8e-36 score:122.8 best_domain_score:122.8 name:PMT_2;
tm_num 13;
2230 4872 transmembrane_helix
ID metaerg.pl|11345
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i2968-3036o3046-3099i3157-3225o3253-3321i3355-3423o3547-3606i3640-3708o3811-3879i3916-3975o4048-4116i4150-4218o4231-4299i4336-4404o;
4961 5179 CDS
ID metaerg.pl|11346
allgo_ids GO:0003723; GO:0003743; GO:0006413; GO:0005737; GO:0043022; GO:0019843;
allko_ids K02518;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725406.1 1 72 evalue:2.6e-33 qcov:100.00 identity:97.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF01176;
pfam_desc Translation initiation factor 1A / IF-1;
pfam_id eIF-1a;
pfam_target db:Pfam-A.hmm|PF01176.19 evalue:4e-28 score:96.2 best_domain_score:96.1 name:eIF-1a;
sprot_desc Translation initiation factor IF-1;
sprot_id sp|Q1QUS2|IF1_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QUS2|IF1_CHRSD 1 72 evalue:2.1e-29 qcov:100.00 identity:80.60;
tigrfam_acc TIGR00008;
tigrfam_desc translation initiation factor IF-1;
tigrfam_mainrole Protein synthesis;
tigrfam_name infA;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00008 evalue:3e-38 score:128.8 best_domain_score:128.7 name:TIGR00008;
7519 5231 CDS
ID metaerg.pl|11347
allgo_ids GO:0005524; GO:0016887; GO:0019538; GO:0043335;
allko_ids K03694;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725405.1 1 762 evalue:0.0e+00 qcov:100.00 identity:86.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00004; PF13191; PF07724; PF13401; PF07726; PF07728; PF17871; PF10431; PF02861; PF01078; PF05496; PF00158; PF05621;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA ATPase domain; AAA domain (Cdc48 subfamily); AAA domain; ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); AAA lid domain; C-terminal, D2-small domain, of ClpB protein ; Clp amino terminal domain, pathogenicity island component; Magnesium chelatase, subunit ChlI; Holliday junction DNA helicase RuvB P-loop domain; Sigma-54 interaction domain; Bacterial TniB protein;
pfam_id AAA; AAA_16; AAA_2; AAA_22; AAA_3; AAA_5; AAA_lid_9; ClpB_D2-small; Clp_N; Mg_chelatase; RuvB_N; Sigma54_activat; TniB;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:2e-22 score:79.2 best_domain_score:41.9 name:AAA; db:Pfam-A.hmm|PF13191.6 evalue:8.5e-11 score:41.8 best_domain_score:19.4 name:AAA_16; db:Pfam-A.hmm|PF07724.14 evalue:2.2e-47 score:160.6 best_domain_score:150.7 name:AAA_2; db:Pfam-A.hmm|PF13401.6 evalue:1.1e-09 score:37.9 best_domain_score:18.0 name:AAA_22; db:Pfam-A.hmm|PF07726.11 evalue:4.1e-05 score:22.7 best_domain_score:18.2 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:3.9e-16 score:58.5 best_domain_score:41.9 name:AAA_5; db:Pfam-A.hmm|PF17871.1 evalue:1.2e-27 score:95.1 best_domain_score:94.1 name:AAA_lid_9; db:Pfam-A.hmm|PF10431.9 evalue:2.3e-24 score:84.5 best_domain_score:80.9 name:ClpB_D2-small; db:Pfam-A.hmm|PF02861.20 evalue:4.4e-11 score:42.0 best_domain_score:40.1 name:Clp_N; db:Pfam-A.hmm|PF01078.21 evalue:6.5e-05 score:21.6 best_domain_score:7.2 name:Mg_chelatase; db:Pfam-A.hmm|PF05496.12 evalue:4e-07 score:29.1 best_domain_score:9.2 name:RuvB_N; db:Pfam-A.hmm|PF00158.26 evalue:3.1e-09 score:36.0 best_domain_score:21.1 name:Sigma54_activat; db:Pfam-A.hmm|PF05621.11 evalue:3e-06 score:26.0 best_domain_score:14.9 name:TniB;
sprot_desc ATP-dependent Clp protease ATP-binding subunit ClpA;
sprot_id sp|P0ABI1|CLPA_ECO57;
sprot_target db:uniprot_sprot|sp|P0ABI1|CLPA_ECO57 1 755 evalue:1.5e-271 qcov:99.10 identity:63.30;
tigrfam_acc TIGR02639;
tigrfam_desc ATP-dependent Clp protease ATP-binding subunit ClpA;
tigrfam_mainrole Protein fate;
tigrfam_name ClpA;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR02639 evalue:0 score:1064.6 best_domain_score:1064.4 name:TIGR02639;
7953 7618 CDS
ID metaerg.pl|11348
allgo_ids GO:0030163; GO:0006508;
allko_ids K06891;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725404.1 1 111 evalue:3.1e-49 qcov:100.00 identity:87.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF02617;
pfam_desc ATP-dependent Clp protease adaptor protein ClpS;
pfam_id ClpS;
pfam_target db:Pfam-A.hmm|PF02617.17 evalue:1e-33 score:114.2 best_domain_score:114.0 name:ClpS;
sprot_desc ATP-dependent Clp protease adapter protein ClpS;
sprot_id sp|Q607H2|CLPS_METCA;
sprot_target db:uniprot_sprot|sp|Q607H2|CLPS_METCA 9 108 evalue:7.4e-34 qcov:90.10 identity:65.00;
9346 8060 CDS
ID metaerg.pl|11349
allec_ids 4.1.3.1;
allgo_ids GO:0004451; GO:0019752; GO:0046872; GO:0006097; GO:0006099;
allko_ids K01637;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725403.1 3 427 evalue:7.3e-216 qcov:99.30 identity:87.50;
kegg_pathway_id 00630;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metacyc_pathway_id P105-PWY; PWY-561; TCA-GLYOX-BYPASS; GLYOXYLATE-BYPASS; GLYCOLYSIS-TCA-GLYOX-BYPASS;
metacyc_pathway_name TCA cycle IV (2-oxoglutarate decarboxylase);; superpathway of glyoxylate cycle and fatty acid degradation;; superpathway of glyoxylate bypass and TCA;; glyoxylate cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;;
metacyc_pathway_type TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TCA-VARIANTS;; Energy-Metabolism;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00463; PF13714;
pfam_desc Isocitrate lyase family; Phosphoenolpyruvate phosphomutase;
pfam_id ICL; PEP_mutase;
pfam_target db:Pfam-A.hmm|PF00463.21 evalue:3.6e-105 score:351.7 best_domain_score:192.7 name:ICL; db:Pfam-A.hmm|PF13714.6 evalue:1.1e-16 score:60.3 best_domain_score:59.4 name:PEP_mutase;
sprot_desc Isocitrate lyase;
sprot_id sp|Q9K9H0|ACEA_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K9H0|ACEA_BACHD 9 426 evalue:3.4e-175 qcov:97.70 identity:72.00;
tigrfam_acc TIGR01346;
tigrfam_desc isocitrate lyase;
tigrfam_mainrole Energy metabolism;
tigrfam_name isocit_lyase;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01346 evalue:2.4e-182 score:606.2 best_domain_score:351.4 name:TIGR01346;
11029 9401 CDS
ID metaerg.pl|11350
allec_ids 2.3.3.9;
allgo_ids GO:0003824; GO:0005737; GO:0004474; GO:0006097; GO:0006099;
allko_ids K01638;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169541.1 1 542 evalue:6.4e-241 qcov:100.00 identity:76.00;
kegg_pathway_id 00620; 00630;
kegg_pathway_name Pyruvate metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metacyc_pathway_id P105-PWY; PWY-561; GLYCOL-GLYOXDEG-PWY; GLYOXDEG-PWY; TCA-GLYOX-BYPASS; GLYCOLYSIS-TCA-GLYOX-BYPASS; GLYOXYLATE-BYPASS;
metacyc_pathway_name TCA cycle IV (2-oxoglutarate decarboxylase);; superpathway of glyoxylate cycle and fatty acid degradation;; superpathway of glycol metabolism and degradation;; glycolate and glyoxylate degradation II;; superpathway of glyoxylate bypass and TCA;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glyoxylate cycle;;
metacyc_pathway_type TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Alcohol-Degradation; Super-Pathways;; Glycolate-Degradation;; Super-Pathways; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism;;
pfam_acc PF03328; PF01274;
pfam_desc HpcH/HpaI aldolase/citrate lyase family; Malate synthase;
pfam_id HpcH_HpaI; Malate_synthase;
pfam_target db:Pfam-A.hmm|PF03328.14 evalue:7.4e-07 score:27.8 best_domain_score:26.3 name:HpcH_HpaI; db:Pfam-A.hmm|PF01274.22 evalue:2.5e-192 score:639.1 best_domain_score:638.8 name:Malate_synthase;
sprot_desc Malate synthase A;
sprot_id sp|P08997|MASY_ECOLI;
sprot_target db:uniprot_sprot|sp|P08997|MASY_ECOLI 28 541 evalue:1.2e-158 qcov:94.80 identity:54.80;
tigrfam_acc TIGR01344;
tigrfam_desc malate synthase A;
tigrfam_mainrole Energy metabolism;
tigrfam_name malate_syn_A;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01344 evalue:1.7e-223 score:741.7 best_domain_score:741.5 name:TIGR01344;
11227 12129 CDS
ID metaerg.pl|11351
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0003677;
allko_ids K02041; K21703;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725402.1 1 298 evalue:4.0e-152 qcov:99.30 identity:88.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:8.8e-24 score:82.5 best_domain_score:81.7 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:5.7e-42 score:142.7 best_domain_score:142.1 name:LysR_substrate;
sprot_desc HTH-type transcriptional activator CmpR;
sprot_id sp|Q55459|CMPR_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55459|CMPR_SYNY3 3 293 evalue:3.1e-26 qcov:97.00 identity:30.00;
12314 13447 CDS
ID metaerg.pl|11352
allec_ids 2.8.1.13; 2.1.1.61;
allgo_ids GO:0004066; GO:0006529; GO:0005737; GO:0005524; GO:0016783; GO:0000049; GO:0006400;
allko_ids K00566;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725401.1 7 373 evalue:2.2e-160 qcov:97.30 identity:76.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00733; PF03054;
pfam_desc Asparagine synthase; tRNA methyl transferase;
pfam_id Asn_synthase; tRNA_Me_trans;
pfam_target db:Pfam-A.hmm|PF00733.21 evalue:1.8e-06 score:27.1 best_domain_score:26.8 name:Asn_synthase; db:Pfam-A.hmm|PF03054.16 evalue:2.6e-131 score:436.9 best_domain_score:436.7 name:tRNA_Me_trans;
sprot_desc tRNA-specific 2-thiouridylase MnmA;
sprot_id sp|Q1QUR7|MNMA_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QUR7|MNMA_CHRSD 8 360 evalue:1.2e-123 qcov:93.60 identity:60.90;
tigrfam_acc TIGR00420;
tigrfam_desc tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name trmU;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00420 evalue:6.1e-126 score:419.1 best_domain_score:418.9 name:TIGR00420;
13461 14072 CDS
ID metaerg.pl|11353
allgo_ids GO:0005737; GO:0005886;
allko_ids K07153;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725400.1 2 203 evalue:4.6e-67 qcov:99.50 identity:64.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF04356;
pfam_desc Protein of unknown function (DUF489);
pfam_id DUF489;
pfam_target db:Pfam-A.hmm|PF04356.12 evalue:1.6e-57 score:193.8 best_domain_score:193.7 name:DUF489;
sprot_desc High frequency lysogenization protein HflD homolog;
sprot_id sp|A1U1H6|HFLD_MARHV;
sprot_target db:uniprot_sprot|sp|A1U1H6|HFLD_MARHV 1 201 evalue:4.2e-27 qcov:99.00 identity:35.80;
14237 17005 CDS
ID metaerg.pl|11354
allec_ids 4.2.1.3;
allgo_ids GO:0005737; GO:0005829; GO:0047456; GO:0051539; GO:0003994; GO:0005506; GO:0003730; GO:0003729; GO:0009061; GO:0006101; GO:0019679; GO:0006979; GO:0006099;
allko_ids K01704; K01703; K01682; K01702; K01681;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725395.1 1 922 evalue:0.0e+00 qcov:100.00 identity:83.80;
kegg_pathway_id 00720; 00290; 00020; 00630;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Valine, leucine and isoleucine biosynthesis; Citrate cycle (TCA cycle); Glyoxylate and dicarboxylate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metacyc_pathway_id FERMENTATION-PWY; GLYOXYLATE-BYPASS; PWY-561; PWY-5392; REDCITCYC; PWY-5464; P23-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5690; P105-PWY; PWY-6549; TCA-GLYOX-BYPASS; ANARESP1-PWY; PWY-5750; TCA; PWY-5913;
metacyc_pathway_name mixed acid fermentation;; glyoxylate cycle;; superpathway of glyoxylate cycle and fatty acid degradation;; reductive TCA cycle II;; TCA cycle VIII (Helicobacter);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; reductive TCA cycle I;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; TCA cycle II (plants and fungi);; TCA cycle IV (2-oxoglutarate decarboxylase);; L-glutamine biosynthesis III;; superpathway of glyoxylate bypass and TCA;; ; itaconate biosynthesis I;; TCA cycle I (prokaryotic);; partial TCA cycle (obligate autotrophs);;
metacyc_pathway_type Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; TCA-VARIANTS;; TCA-VARIANTS;; GLUTAMINE-SYN;; Super-Pathways; TCA-VARIANTS;; ; Itaconate-Biosynthesis;; TCA-VARIANTS;; TCA-VARIANTS;;
pfam_acc PF00330; PF00694;
pfam_desc Aconitase family (aconitate hydratase); Aconitase C-terminal domain;
pfam_id Aconitase; Aconitase_C;
pfam_target db:Pfam-A.hmm|PF00330.20 evalue:1.4e-180 score:600.4 best_domain_score:599.9 name:Aconitase; db:Pfam-A.hmm|PF00694.19 evalue:5.4e-46 score:155.4 best_domain_score:154.6 name:Aconitase_C;
sprot_desc Aconitate hydratase A;
sprot_id sp|Q9I3F5|ACNA_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I3F5|ACNA_PSEAE 3 910 evalue:0.0e+00 qcov:98.50 identity:62.50;
tigrfam_acc TIGR01341;
tigrfam_desc aconitate hydratase 1;
tigrfam_mainrole Energy metabolism;
tigrfam_name aconitase_1;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01341 evalue:0 score:1373.4 best_domain_score:1373.0 name:TIGR01341;
17951 17178 CDS
ID metaerg.pl|11355
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
sp YES;
tm_num 1;
17178 17303 signal_peptide
ID metaerg.pl|11356
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
17951 17178 transmembrane_helix
ID metaerg.pl|11357
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i17238-17306o;
18895 18032 CDS
ID metaerg.pl|11358
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726610.1 13 276 evalue:3.4e-84 qcov:92.00 identity:59.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
19665 18898 CDS
ID metaerg.pl|11359
allgo_ids GO:0009883; GO:0009584; GO:0018298; GO:0009585; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726609.1 11 254 evalue:5.0e-55 qcov:95.70 identity:46.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00563;
pfam_desc EAL domain;
pfam_id EAL;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:4e-36 score:123.9 best_domain_score:123.7 name:EAL;
sprot_desc Phytochrome-like protein cph2;
sprot_id sp|Q55434|PHY2_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55434|PHY2_SYNY3 50 254 evalue:3.0e-14 qcov:80.40 identity:26.70;
19746 21575 CDS
ID metaerg.pl|11360
allko_ids K02035;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726608.1 30 605 evalue:3.1e-175 qcov:94.60 identity:54.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:3.3e-51 score:173.6 best_domain_score:173.4 name:SBP_bac_5;
sp YES;
19746 19862 lipoprotein_signal_peptide
ID metaerg.pl|11361
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
21572 22501 CDS
ID metaerg.pl|11362
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0030420; GO:0015031; GO:0030435;
allko_ids K02033; K15581;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37158.1 11 306 evalue:2.2e-89 qcov:95.80 identity:56.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:5.4e-25 score:87.4 best_domain_score:87.4 name:BPD_transp_1;
sprot_desc Oligopeptide transport system permease protein OppB;
sprot_id sp|P24138|OPPB_BACSU;
sprot_target db:uniprot_sprot|sp|P24138|OPPB_BACSU 30 307 evalue:1.7e-27 qcov:90.00 identity:29.40;
tm_num 6;
21572 22501 transmembrane_helix
ID metaerg.pl|11363
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i21584-21652o21857-21925i21983-22051o22094-22153i22259-22327o22397-22465i;
22498 23334 CDS
ID metaerg.pl|11364
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015031;
allko_ids K02034;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37159.1 14 273 evalue:6.5e-64 qcov:93.50 identity:48.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.5e-19 score:69.7 best_domain_score:69.7 name:BPD_transp_1;
sprot_desc Putative peptide transport permease protein MT1319;
sprot_id sp|P9WFZ8|Y1282_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WFZ8|Y1282_MYCTO 57 276 evalue:7.1e-17 qcov:79.10 identity:32.30;
tm_num 5;
22498 23334 transmembrane_helix
ID metaerg.pl|11365
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i22534-22602o22723-22791i22825-22893o23080-23148i23209-23277o;
23327 24376 CDS
ID metaerg.pl|11366
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0030420; GO:0015031; GO:0030435;
allko_ids K06861; K02071; K01996; K02045; K05847; K02006; K02052; K02032; K02023; K02049; K02031;
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Thermoactinomycetales;f__Thermoactinomycetaceae;g__Shimazuella;s__Shimazuella kribbensis;
genomedb_acc GCF_000428065.1;
genomedb_target db:genomedb|GCF_000428065.1|WP_028776297.1 3 321 evalue:3.5e-67 qcov:91.40 identity:42.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF13304; PF00005; PF08352;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id AAA_21; ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.7e-10 score:40.4 best_domain_score:26.9 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:9.8e-25 score:86.9 best_domain_score:86.5 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:1.9e-15 score:56.4 best_domain_score:55.4 name:oligo_HPY;
sprot_desc Oligopeptide transport ATP-binding protein AppD;
sprot_id sp|P42064|APPD_BACSU;
sprot_target db:uniprot_sprot|sp|P42064|APPD_BACSU 5 320 evalue:2.1e-58 qcov:90.50 identity:39.40;
tigrfam_acc TIGR01727;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name oligo_HPY;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:4.6e-24 score:83.5 best_domain_score:82.8 name:TIGR01727;
24813 24337 CDS
ID metaerg.pl|11367
allgo_ids GO:0043565; GO:0005829; GO:0003700; GO:0006524; GO:0043201;
allko_ids K03719;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725394.1 3 158 evalue:2.4e-63 qcov:98.70 identity:78.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF01037; PF13412; PF13404;
pfam_desc Lrp/AsnC ligand binding domain; Winged helix-turn-helix DNA-binding; AsnC-type helix-turn-helix domain;
pfam_id AsnC_trans_reg; HTH_24; HTH_AsnC-type;
pfam_target db:Pfam-A.hmm|PF01037.21 evalue:4.1e-14 score:51.5 best_domain_score:50.9 name:AsnC_trans_reg; db:Pfam-A.hmm|PF13412.6 evalue:8.7e-14 score:50.1 best_domain_score:49.2 name:HTH_24; db:Pfam-A.hmm|PF13404.6 evalue:9.9e-16 score:56.5 best_domain_score:55.5 name:HTH_AsnC-type;
sprot_desc Leucine-responsive regulatory protein;
sprot_id sp|P45265|LRP_HAEIN;
sprot_target db:uniprot_sprot|sp|P45265|LRP_HAEIN 3 142 evalue:3.4e-16 qcov:88.60 identity:34.30;
24903 26102 CDS
ID metaerg.pl|11368
allec_ids 4.4.1.11;
allgo_ids GO:0030170; GO:0047982; GO:0018826;
allko_ids K01761;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725393.1 5 386 evalue:5.5e-149 qcov:95.70 identity:70.70;
kegg_pathway_id 00450;
kegg_pathway_name Selenoamino acid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metacyc_pathway_id PWY-701;
metacyc_pathway_name L-methionine degradation II;;
metacyc_pathway_type METHIONINE-DEG;;
pfam_acc PF01053;
pfam_desc Cys/Met metabolism PLP-dependent enzyme;
pfam_id Cys_Met_Meta_PP;
pfam_target db:Pfam-A.hmm|PF01053.20 evalue:3.2e-104 score:347.7 best_domain_score:347.5 name:Cys_Met_Meta_PP;
sprot_desc L-methionine gamma-lyase;
sprot_id sp|Q826W3|MEGL_STRAW;
sprot_target db:uniprot_sprot|sp|Q826W3|MEGL_STRAW 7 386 evalue:2.1e-107 qcov:95.20 identity:54.70;
26671 26165 CDS
ID metaerg.pl|11369
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Nitrococcaceae;g__Nitrococcus;s__Nitrococcus mobilis;
genomedb_acc GCF_000153205.1;
genomedb_target db:genomedb|GCF_000153205.1|WP_005000126.1 12 168 evalue:1.8e-40 qcov:93.50 identity:51.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00027;
pfam_desc Cyclic nucleotide-binding domain;
pfam_id cNMP_binding;
pfam_target db:Pfam-A.hmm|PF00027.29 evalue:1.1e-10 score:40.7 best_domain_score:40.2 name:cNMP_binding;
26893 28272 CDS
ID metaerg.pl|11370
allgo_ids GO:0015558; GO:1902604; GO:0016021; GO:0005886; GO:0015297;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter sp001564065;
genomedb_acc GCA_001564065.1;
genomedb_target db:genomedb|GCA_001564065.1|LKNA01000069.1_2 5 459 evalue:3.9e-167 qcov:99.10 identity:70.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF03806; PF03606; PF02667;
pfam_desc AbgT putative transporter family; C4-dicarboxylate anaerobic carrier; Short chain fatty acid transporter;
pfam_id ABG_transport; DcuC; SCFA_trans;
pfam_target db:Pfam-A.hmm|PF03806.13 evalue:4.4e-05 score:21.1 best_domain_score:21.1 name:ABG_transport; db:Pfam-A.hmm|PF03606.15 evalue:8.4e-94 score:313.9 best_domain_score:313.5 name:DcuC; db:Pfam-A.hmm|PF02667.14 evalue:1.4e-08 score:33.5 best_domain_score:33.5 name:SCFA_trans;
sprot_desc Putative basic amino acid antiporter YfcC;
sprot_id sp|P39263|YFCC_ECOLI;
sprot_target db:uniprot_sprot|sp|P39263|YFCC_ECOLI 2 458 evalue:1.0e-60 qcov:99.60 identity:33.40;
tm_num 13;
26893 28272 transmembrane_helix
ID metaerg.pl|11371
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i26911-26979o27115-27168i27229-27288o27301-27345i27364-27432o27475-27543i27643-27696o27709-27777i27811-27870o27898-27966i27979-28047o28105-28173i28192-28260o;
29273 28320 CDS
ID metaerg.pl|11372
allec_ids 2.7.6.1;
allgo_ids GO:0009116; GO:0005737; GO:0005524; GO:0016301; GO:0000287; GO:0004749; GO:0006015; GO:0009165; GO:0009156;
allko_ids K00948;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727004.1 7 317 evalue:6.1e-159 qcov:98.10 identity:93.90;
kegg_pathway_id 00230; 00030;
kegg_pathway_name Purine metabolism; Pentose phosphate pathway;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metacyc_pathway_id PRPP-PWY; PWY0-662; PWY-6404;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; PRPP biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Super-Pathways;; Sugar-Phosphate-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF00156; PF13793; PF14572;
pfam_desc Phosphoribosyl transferase domain; N-terminal domain of ribose phosphate pyrophosphokinase; Phosphoribosyl synthetase-associated domain;
pfam_id Pribosyltran; Pribosyltran_N; Pribosyl_synth;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:4e-20 score:71.2 best_domain_score:71.0 name:Pribosyltran; db:Pfam-A.hmm|PF13793.6 evalue:1e-49 score:166.6 best_domain_score:160.1 name:Pribosyltran_N; db:Pfam-A.hmm|PF14572.6 evalue:2.3e-30 score:105.2 best_domain_score:102.9 name:Pribosyl_synth;
sprot_desc Ribose-phosphate pyrophosphokinase;
sprot_id sp|Q8PNU0|KPRS_XANAC;
sprot_target db:uniprot_sprot|sp|Q8PNU0|KPRS_XANAC 5 317 evalue:1.1e-127 qcov:98.70 identity:75.50;
tigrfam_acc TIGR01251;
tigrfam_desc ribose-phosphate diphosphokinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name ribP_PPkin;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01251 evalue:5.1e-118 score:392.6 best_domain_score:392.5 name:TIGR01251;
29389 29313 tRNA
ID metaerg.pl|11373
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
name tRNA_Gln_ttg;
30071 29445 CDS
ID metaerg.pl|11374
allgo_ids GO:0009279; GO:0015031;
allko_ids K02494;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725391.1 9 198 evalue:1.2e-67 qcov:91.30 identity:64.20;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF03550;
pfam_desc Outer membrane lipoprotein LolB;
pfam_id LolB;
pfam_target db:Pfam-A.hmm|PF03550.14 evalue:9.8e-30 score:102.8 best_domain_score:102.6 name:LolB;
sp YES;
sprot_desc Outer-membrane lipoprotein LolB;
sprot_id sp|A4VPC2|LOLB_PSEU5;
sprot_target db:uniprot_sprot|sp|A4VPC2|LOLB_PSEU5 16 198 evalue:6.3e-18 qcov:88.00 identity:25.30;
tm_num 1;
29445 29510 lipoprotein_signal_peptide
ID metaerg.pl|11375
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
30071 29445 transmembrane_helix
ID metaerg.pl|11376
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i29463-29522o;
31846 30068 CDS
ID metaerg.pl|11377
allgo_ids GO:0005515;
allko_ids K09571; K01802; K08884; K05864;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725390.1 23 588 evalue:1.4e-137 qcov:95.60 identity:48.90;
kegg_pathway_id 05012; 04020;
kegg_pathway_name Parkinson's disease; Calcium signaling pathway;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF12895; PF04733; PF00515; PF13414; PF13424; PF13428; PF13432; PF13431; PF14559; PF07719; PF07721; PF13174; PF13176; PF13181;
pfam_desc Anaphase-promoting complex, cyclosome, subunit 3; Coatomer epsilon subunit; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id ANAPC3; Coatomer_E; TPR_1; TPR_11; TPR_12; TPR_14; TPR_16; TPR_17; TPR_19; TPR_2; TPR_4; TPR_6; TPR_7; TPR_8;
pfam_target db:Pfam-A.hmm|PF12895.7 evalue:3.5e-16 score:58.4 best_domain_score:21.0 name:ANAPC3; db:Pfam-A.hmm|PF04733.14 evalue:2.2e-06 score:26.5 best_domain_score:23.9 name:Coatomer_E; db:Pfam-A.hmm|PF00515.28 evalue:1e-19 score:68.7 best_domain_score:16.6 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:2.3e-10 score:39.2 best_domain_score:6.9 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:1.8e-19 score:69.0 best_domain_score:23.8 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:2.1e-15 score:55.4 best_domain_score:20.0 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:2.9e-15 score:55.9 best_domain_score:19.3 name:TPR_16; db:Pfam-A.hmm|PF13431.6 evalue:1.7e-11 score:42.9 best_domain_score:12.1 name:TPR_17; db:Pfam-A.hmm|PF14559.6 evalue:8.2e-26 score:89.6 best_domain_score:31.6 name:TPR_19; db:Pfam-A.hmm|PF07719.17 evalue:1.5e-30 score:102.1 best_domain_score:16.0 name:TPR_2; db:Pfam-A.hmm|PF07721.14 evalue:2.9e-07 score:29.7 best_domain_score:8.5 name:TPR_4; db:Pfam-A.hmm|PF13174.6 evalue:2.6e-10 score:39.5 best_domain_score:9.8 name:TPR_6; db:Pfam-A.hmm|PF13176.6 evalue:8.8e-10 score:37.2 best_domain_score:17.3 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:8.1e-21 score:71.7 best_domain_score:11.2 name:TPR_8;
sp YES;
sprot_desc TPR repeat-containing protein PA4667;
sprot_id sp|P42810|Y4667_PSEAE;
sprot_target db:uniprot_sprot|sp|P42810|Y4667_PSEAE 70 538 evalue:1.3e-28 qcov:79.20 identity:26.80;
tm_num 1;
30068 30166 lipoprotein_signal_peptide
ID metaerg.pl|11378
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
31846 30068 transmembrane_helix
ID metaerg.pl|11379
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i30128-30187o;
31860 33116 CDS
ID metaerg.pl|11380
allec_ids 1.2.1.70;
allgo_ids GO:0008883; GO:0033014; GO:0050661; GO:0055114; GO:0006782;
allko_ids K02492;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169538.1 1 411 evalue:3.6e-167 qcov:98.30 identity:71.80;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metacyc_pathway_id PWY-5188; PWY-5918;
metacyc_pathway_name tetrapyrrole biosynthesis I (from glutamate);; superpathay of heme b biosynthesis from glutamate;;
metacyc_pathway_type Tetrapyrrole-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF00745; PF05201; PF01488;
pfam_desc Glutamyl-tRNAGlu reductase, dimerisation domain; Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase;
pfam_id GlutR_dimer; GlutR_N; Shikimate_DH;
pfam_target db:Pfam-A.hmm|PF00745.20 evalue:4.5e-21 score:74.3 best_domain_score:73.2 name:GlutR_dimer; db:Pfam-A.hmm|PF05201.15 evalue:6.2e-44 score:148.5 best_domain_score:147.2 name:GlutR_N; db:Pfam-A.hmm|PF01488.20 evalue:7.9e-38 score:128.9 best_domain_score:128.2 name:Shikimate_DH;
sprot_desc Glutamyl-tRNA reductase;
sprot_id sp|Q0AC03|HEM1_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0AC03|HEM1_ALKEH 1 405 evalue:4.8e-94 qcov:96.90 identity:44.20;
tigrfam_acc TIGR01035;
tigrfam_desc glutamyl-tRNA reductase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemA;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01035 evalue:5.4e-120 score:400.3 best_domain_score:400.0 name:TIGR01035;
33113 34192 CDS
ID metaerg.pl|11381
allgo_ids GO:0006415; GO:0005737; GO:0016149;
allko_ids K02835;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725388.1 1 359 evalue:2.2e-144 qcov:100.00 identity:73.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF03462; PF00472;
pfam_desc PCRF domain; RF-1 domain;
pfam_id PCRF; RF-1;
pfam_target db:Pfam-A.hmm|PF03462.18 evalue:4.7e-73 score:244.4 best_domain_score:243.8 name:PCRF; db:Pfam-A.hmm|PF00472.20 evalue:2.6e-42 score:142.7 best_domain_score:142.7 name:RF-1;
sprot_desc Peptide chain release factor 1;
sprot_id sp|A1U367|RF1_MARHV;
sprot_target db:uniprot_sprot|sp|A1U367|RF1_MARHV 1 359 evalue:8.9e-129 qcov:100.00 identity:64.10;
tigrfam_acc TIGR00019;
tigrfam_desc peptide chain release factor 1;
tigrfam_mainrole Protein synthesis;
tigrfam_name prfA;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00019 evalue:4.6e-163 score:541.4 best_domain_score:541.3 name:TIGR00019;
34195 34611 CDS
ID metaerg.pl|11382
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Aquisalimonadaceae;g__Aquisalimonas;s__Aquisalimonas asiatica;
genomedb_acc GCF_900110585.1;
genomedb_target db:genomedb|GCF_900110585.1|WP_091639418.1 2 133 evalue:1.1e-43 qcov:95.70 identity:65.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF01894;
pfam_desc Uncharacterised protein family UPF0047;
pfam_id UPF0047;
pfam_target db:Pfam-A.hmm|PF01894.17 evalue:4.4e-42 score:142.1 best_domain_score:141.8 name:UPF0047;
sprot_desc hypothetical protein;
sprot_id sp|P74125|Y1880_SYNY3;
sprot_target db:uniprot_sprot|sp|P74125|Y1880_SYNY3 2 131 evalue:1.1e-39 qcov:94.20 identity:57.70;
tigrfam_acc TIGR00149;
tigrfam_desc secondary thiamine-phosphate synthase enzyme;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00149_YjbQ;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00149 evalue:8.1e-46 score:154.2 best_domain_score:154.0 name:TIGR00149;
34679 36076 CDS
ID metaerg.pl|11383
allec_ids 1.10.3.-;
allgo_ids GO:0009055; GO:0019646; GO:0070069; GO:0016021; GO:0005886; GO:0020037; GO:0046872; GO:0016682;
allko_ids K00425;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725386.1 1 462 evalue:3.6e-224 qcov:99.40 identity:83.80;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metacyc_pathway_id PWY-5476; PWY-5404; PWY-5439; PWY-5787; PWY-5466; PWY-5405;
metacyc_pathway_name cornusiin E biosynthesis;; betaxanthin biosynthesis (via dopaxanthin);; betacyanin biosynthesis (via dopamine);; oligomeric urushiol biosynthesis;; matairesinol biosynthesis;; superpathway of betalain biosynthesis;;
metacyc_pathway_type ELLAGITANNINS;; BETALAIN-ALKALOIDS;; BETALAIN-ALKALOIDS;; AROMATIC-COMPOUNDS-BIOSYN;; LIGNAN-SYN;; BETALAIN-ALKALOIDS; Super-Pathways;;
pfam_acc PF01654;
pfam_desc Cytochrome bd terminal oxidase subunit I;
pfam_id Cyt_bd_oxida_I;
pfam_target db:Pfam-A.hmm|PF01654.17 evalue:1.6e-164 score:546.7 best_domain_score:546.6 name:Cyt_bd_oxida_I;
sprot_desc Cytochrome bd ubiquinol oxidase subunit 1;
sprot_id sp|P94364|CYDA_BACSU;
sprot_target db:uniprot_sprot|sp|P94364|CYDA_BACSU 3 436 evalue:5.6e-75 qcov:93.30 identity:34.70;
tm_num 9;
34679 36076 transmembrane_helix
ID metaerg.pl|11384
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology o34721-34789i34838-34906o34964-35032i35051-35119o35225-35293i35330-35389o35636-35704i35741-35809o35891-35959i;
36079 37086 CDS
ID metaerg.pl|11385
allec_ids 7.1.1.3; 1.10.3.-;
allgo_ids GO:0016020; GO:0055114; GO:0070069; GO:0016021; GO:0005886; GO:0009055; GO:0046872; GO:0016682; GO:0019646; GO:0006119;
allko_ids K00426;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725385.1 1 335 evalue:2.1e-165 qcov:100.00 identity:85.70;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metabolic_acc TIGR00203;
metabolic_process compound:Oxygen;process:Cytochrome (quinone) oxidase, bd type;gene:CydB;;
metabolic_target db:metabolic.hmm|TIGR00203 evalue:1.7e-42 score:145.1 best_domain_score:122.1 name:TIGR00203;
metacyc_pathway_id PWY-5476; PWY-5404; PWY-5439; PWY-5405; PWY-5466; PWY-5787;
metacyc_pathway_name cornusiin E biosynthesis;; betaxanthin biosynthesis (via dopaxanthin);; betacyanin biosynthesis (via dopamine);; superpathway of betalain biosynthesis;; matairesinol biosynthesis;; oligomeric urushiol biosynthesis;;
metacyc_pathway_type ELLAGITANNINS;; BETALAIN-ALKALOIDS;; BETALAIN-ALKALOIDS;; BETALAIN-ALKALOIDS; Super-Pathways;; LIGNAN-SYN;; AROMATIC-COMPOUNDS-BIOSYN;;
pfam_acc PF02322;
pfam_desc Cytochrome bd terminal oxidase subunit II;
pfam_id Cyt_bd_oxida_II;
pfam_target db:Pfam-A.hmm|PF02322.15 evalue:9.3e-91 score:303.6 best_domain_score:303.4 name:Cyt_bd_oxida_II;
sprot_desc Cytochrome bd-II ubiquinol oxidase subunit 2;
sprot_id sp|P26458|APPB_ECOLI;
sprot_target db:uniprot_sprot|sp|P26458|APPB_ECOLI 6 326 evalue:8.2e-28 qcov:95.80 identity:29.70;
tigrfam_acc TIGR00203;
tigrfam_desc cytochrome d ubiquinol oxidase, subunit II;
tigrfam_mainrole Energy metabolism;
tigrfam_name cydB;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR00203 evalue:1.7e-42 score:145.1 best_domain_score:122.1 name:TIGR00203;
tm_num 8;
36079 37086 transmembrane_helix
ID metaerg.pl|11386
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i36097-36150o36301-36369i36427-36495o36553-36621i36658-36726o36763-36831i36850-36918o36976-37044i;
37109 38788 CDS
ID metaerg.pl|11387
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0043190; GO:0005887; GO:0016020; GO:0005886; GO:0016887; GO:0045454; GO:0033228; GO:0034775;
allko_ids K01995; K10111; K06861; K01996; K02045; K02006; K02052; K02017; K16013;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL39104.1 6 554 evalue:7.7e-141 qcov:98.20 identity:53.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:9e-23 score:80.5 best_domain_score:80.1 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:3.4e-27 score:94.9 best_domain_score:94.2 name:ABC_tran;
sprot_desc ATP-binding/permease protein CydD;
sprot_id sp|P29018|CYDD_ECOLI;
sprot_target db:uniprot_sprot|sp|P29018|CYDD_ECOLI 5 556 evalue:5.9e-95 qcov:98.70 identity:40.60;
tigrfam_acc TIGR02857;
tigrfam_desc thiol reductant ABC exporter, CydD subunit;
tigrfam_name CydD;
tigrfam_target db:TIGRFAMs.hmm|TIGR02857 evalue:6.1e-169 score:562.5 best_domain_score:562.2 name:TIGR02857;
tm_num 6;
37109 38788 transmembrane_helix
ID metaerg.pl|11388
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i37166-37234o37262-37330i37484-37552o37565-37633i37814-37882o37919-37987i;
38785 40461 CDS
ID metaerg.pl|11389
allgo_ids GO:0005524; GO:0043190; GO:0016021; GO:0005887; GO:0016887; GO:0042626; GO:0045454; GO:0033228; GO:0034775; GO:0070453;
allko_ids K02052; K02006; K05847; K02010; K02045; K01996; K06861; K01995; K16012;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725383.1 11 533 evalue:5.6e-115 qcov:93.70 identity:48.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00004; PF00664; PF00005;
pfam_desc ATPase family associated with various cellular activities (AAA); ABC transporter transmembrane region; ABC transporter;
pfam_id AAA; ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:9.3e-05 score:22.1 best_domain_score:18.0 name:AAA; db:Pfam-A.hmm|PF00664.23 evalue:7.7e-14 score:51.2 best_domain_score:51.0 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:1.8e-30 score:105.5 best_domain_score:104.6 name:ABC_tran;
sprot_desc ATP-binding/permease protein CydC;
sprot_id sp|P23886|CYDC_ECOLI;
sprot_target db:uniprot_sprot|sp|P23886|CYDC_ECOLI 1 536 evalue:7.2e-77 qcov:96.10 identity:36.40;
tigrfam_acc TIGR02868;
tigrfam_desc thiol reductant ABC exporter, CydC subunit;
tigrfam_name CydC;
tigrfam_target db:TIGRFAMs.hmm|TIGR02868 evalue:2e-120 score:402.1 best_domain_score:401.8 name:TIGR02868;
tm_num 6;
38785 40461 transmembrane_helix
ID metaerg.pl|11390
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i38845-38913o38923-38991i39181-39249o39262-39330i39529-39597o39607-39675i;
41856 40462 CDS
ID metaerg.pl|11391
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0005298; GO:0031402; GO:0015824;
allko_ids K11928;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725382.1 1 459 evalue:3.1e-188 qcov:98.90 identity:77.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00474;
pfam_desc Sodium:solute symporter family;
pfam_id SSF;
pfam_target db:Pfam-A.hmm|PF00474.17 evalue:4.6e-55 score:186.3 best_domain_score:185.9 name:SSF;
sp YES;
sprot_desc High-affinity proline transporter PutP;
sprot_id sp|P94392|PUTP_BACSU;
sprot_target db:uniprot_sprot|sp|P94392|PUTP_BACSU 13 449 evalue:1.2e-53 qcov:94.20 identity:32.80;
tm_num 12;
40462 40521 signal_peptide
ID metaerg.pl|11392
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
41856 40462 transmembrane_helix
ID metaerg.pl|11393
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i40465-40524o40657-40725i40816-40875o40933-41001i41035-41103o41146-41214i41275-41343o41386-41454i41539-41607o41617-41685i41704-41763o41773-41826i;
41974 42822 CDS
ID metaerg.pl|11394
allgo_ids GO:0004518;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_043740264.1 24 280 evalue:3.6e-70 qcov:91.10 identity:57.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF02577;
pfam_desc Bifunctional nuclease;
pfam_id DNase-RNase;
pfam_target db:Pfam-A.hmm|PF02577.14 evalue:4.2e-38 score:129.1 best_domain_score:128.5 name:DNase-RNase;
sp YES;
41974 42045 signal_peptide
ID metaerg.pl|11395
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
43437 42880 CDS
ID metaerg.pl|11396
allgo_ids GO:0000160;
allko_ids K11231; K07704; K08282; K01937; K07677; K07645; K07708; K11356; K11640; K02484; K07642; K11711; K07651; K02478; K07679; K07648; K07711; K11354; K07778; K07768; K07652; K07646; K07641; K07673; K01120; K07639; K08475; K03407; K07637; K07654; K07682; K07717; K07675; K07647; K04757; K11357; K10125; K11383; K13761; K02486; K12767; K07644; K07709; K10681; K07676; K06379; K01769; K07678; K10715; K11527; K07653; K07636; K02482; K02480; K07710; K02489; K07716; K08479; K10916; K02668; K03388;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169537.1 1 181 evalue:3.9e-65 qcov:97.80 identity:73.40;
kegg_pathway_id 03090; 04011; 02020; 00240; 05111; 00230; 00790;
kegg_pathway_name Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:1.6e-22 score:79.0 best_domain_score:78.7 name:Response_reg;
44749 43463 CDS
ID metaerg.pl|11397
allko_ids K01120;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169536.1 1 427 evalue:4.6e-202 qcov:99.80 identity:79.60;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF11871; PF01966; PF08668; PF13487;
pfam_desc Domain of unknown function (DUF3391); HD domain; HDOD domain; HD domain;
pfam_id DUF3391; HD; HDOD; HD_5;
pfam_target db:Pfam-A.hmm|PF11871.8 evalue:2.2e-12 score:46.9 best_domain_score:46.1 name:DUF3391; db:Pfam-A.hmm|PF01966.22 evalue:1.4e-16 score:60.0 best_domain_score:59.1 name:HD; db:Pfam-A.hmm|PF08668.12 evalue:3.3e-06 score:25.9 best_domain_score:25.1 name:HDOD; db:Pfam-A.hmm|PF13487.6 evalue:7.9e-09 score:34.9 best_domain_score:33.7 name:HD_5;
45047 47089 CDS
ID metaerg.pl|11398
allec_ids 3.4.24.71;
allgo_ids GO:0004222; GO:0006508; GO:0016021; GO:0005886; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169535.1 5 680 evalue:1.2e-284 qcov:99.40 identity:71.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF01431; PF05649;
pfam_desc Peptidase family M13; Peptidase family M13;
pfam_id Peptidase_M13; Peptidase_M13_N;
pfam_target db:Pfam-A.hmm|PF01431.21 evalue:3.1e-71 score:238.5 best_domain_score:237.8 name:Peptidase_M13; db:Pfam-A.hmm|PF05649.13 evalue:9.9e-88 score:294.6 best_domain_score:294.1 name:Peptidase_M13_N;
sp YES;
sprot_desc Endothelin-converting enzyme 1;
sprot_id sp|P97739|ECE1_CAVPO;
sprot_target db:uniprot_sprot|sp|P97739|ECE1_CAVPO 41 680 evalue:6.0e-86 qcov:94.10 identity:30.90;
45047 45106 signal_peptide
ID metaerg.pl|11399
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
48953 47124 CDS
ID metaerg.pl|11400
allgo_ids GO:0005975; GO:0016810;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Aquimonas;s__Aquimonas voraii;
genomedb_acc GCF_900101825.1;
genomedb_target db:genomedb|GCF_900101825.1|WP_091241076.1 17 586 evalue:2.0e-113 qcov:93.60 identity:39.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF01522;
pfam_desc Polysaccharide deacetylase;
pfam_id Polysacc_deac_1;
pfam_target db:Pfam-A.hmm|PF01522.21 evalue:7.7e-11 score:41.2 best_domain_score:40.5 name:Polysacc_deac_1;
sp YES;
47124 47201 signal_peptide
ID metaerg.pl|11401
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
49045 50043 CDS
ID metaerg.pl|11402
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725378.1 7 332 evalue:1.3e-124 qcov:98.20 identity:65.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF09982;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2219);
pfam_id DUF2219;
pfam_target db:Pfam-A.hmm|PF09982.9 evalue:2.1e-83 score:279.1 best_domain_score:278.9 name:DUF2219;
sp YES;
49045 49113 signal_peptide
ID metaerg.pl|11403
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
51147 50047 CDS
ID metaerg.pl|11404
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725376.1 1 363 evalue:1.2e-142 qcov:99.20 identity:70.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00563; PF00498; PF16697;
pfam_desc EAL domain; FHA domain; Inner membrane component of T3SS, cytoplasmic domain;
pfam_id EAL; FHA; Yop-YscD_cpl;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:1.3e-35 score:122.3 best_domain_score:118.7 name:EAL; db:Pfam-A.hmm|PF00498.26 evalue:3.4e-19 score:68.2 best_domain_score:67.5 name:FHA; db:Pfam-A.hmm|PF16697.5 evalue:1e-12 score:47.4 best_domain_score:46.6 name:Yop-YscD_cpl;
52025 51219 CDS
ID metaerg.pl|11405
allko_ids K05711; K00022; K03366; K12420; K00120;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169534.1 7 268 evalue:1.0e-106 qcov:97.80 identity:74.40;
kegg_pathway_id 00903; 00062; 00650; 00071; 00360; 00310; 00624; 00281; 00280; 00626; 00361; 00930; 00632; 00380;
kegg_pathway_name Limonene and pinene degradation; Fatty acid elongation in mitochondria; Butanoate metabolism; Fatty acid metabolism; Phenylalanine metabolism; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Naphthalene and anthracene degradation; gamma-Hexachlorocyclohexane degradation; Caprolactam degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:1e-52 score:177.7 best_domain_score:177.4 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:6e-47 score:159.4 best_domain_score:159.1 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:2.5e-10 score:39.8 best_domain_score:38.9 name:KR;
53427 52051 CDS
ID metaerg.pl|11406
allgo_ids GO:0015558; GO:1902604; GO:0016021; GO:0005886; GO:0015297;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725192.1 4 457 evalue:3.5e-184 qcov:99.10 identity:76.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF03806; PF03606; PF02667;
pfam_desc AbgT putative transporter family; C4-dicarboxylate anaerobic carrier; Short chain fatty acid transporter;
pfam_id ABG_transport; DcuC; SCFA_trans;
pfam_target db:Pfam-A.hmm|PF03806.13 evalue:4.3e-07 score:27.8 best_domain_score:27.8 name:ABG_transport; db:Pfam-A.hmm|PF03606.15 evalue:5.1e-89 score:298.1 best_domain_score:297.9 name:DcuC; db:Pfam-A.hmm|PF02667.14 evalue:3e-07 score:29.0 best_domain_score:29.0 name:SCFA_trans;
sprot_desc Putative basic amino acid antiporter YfcC;
sprot_id sp|P39263|YFCC_ECOLI;
sprot_target db:uniprot_sprot|sp|P39263|YFCC_ECOLI 5 457 evalue:9.1e-62 qcov:98.90 identity:32.70;
tm_num 11;
53427 52051 transmembrane_helix
ID metaerg.pl|11407
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i52075-52143o52252-52320i52381-52440o52453-52497i52516-52584o52627-52695i52798-52857o52885-52953i53059-53127o53260-53328i53347-53415o;
53549 53890 CDS
ID metaerg.pl|11408
allgo_ids GO:0008270;
allko_ids K11261;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Halorhodospiraceae;g__Alkalilimnicola;s__Alkalilimnicola ehrlichii;
genomedb_acc GCF_000014785.1;
genomedb_target db:genomedb|GCF_000014785.1|WP_011628171.1 5 111 evalue:7.8e-24 qcov:94.70 identity:58.90;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF01258;
pfam_desc Prokaryotic dksA/traR C4-type zinc finger;
pfam_id zf-dskA_traR;
pfam_target db:Pfam-A.hmm|PF01258.17 evalue:1.8e-09 score:36.6 best_domain_score:36.6 name:zf-dskA_traR;
53928 55265 CDS
ID metaerg.pl|11409
allgo_ids GO:0016021; GO:0055085;
allko_ids K06902; K08217;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D;s__Pseudomonas_D salegens;
genomedb_acc GCF_900105655.1;
genomedb_target db:genomedb|GCF_900105655.1|WP_092387779.1 1 444 evalue:2.6e-179 qcov:99.80 identity:72.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF11700; PF07690; PF13347;
pfam_desc Vacuole effluxer Atg22 like; Major Facilitator Superfamily; MFS/sugar transport protein;
pfam_id ATG22; MFS_1; MFS_2;
pfam_target db:Pfam-A.hmm|PF11700.8 evalue:7.3e-45 score:152.7 best_domain_score:122.1 name:ATG22; db:Pfam-A.hmm|PF07690.16 evalue:6.1e-19 score:67.4 best_domain_score:41.7 name:MFS_1; db:Pfam-A.hmm|PF13347.6 evalue:4.4e-16 score:57.7 best_domain_score:55.3 name:MFS_2;
tm_num 12;
53928 55265 transmembrane_helix
ID metaerg.pl|11410
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i53961-54029o54087-54155i54189-54242o54252-54320i54357-54425o54468-54536i54651-54719o54747-54815i54834-54902o54945-54998i55059-55127o55140-55208i;
56100 55372 CDS
ID metaerg.pl|11411
allgo_ids GO:0016788;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37256.1 3 231 evalue:8.2e-55 qcov:94.60 identity:53.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00657; PF13472;
pfam_desc GDSL-like Lipase/Acylhydrolase; GDSL-like Lipase/Acylhydrolase family;
pfam_id Lipase_GDSL; Lipase_GDSL_2;
pfam_target db:Pfam-A.hmm|PF00657.22 evalue:1.5e-08 score:34.1 best_domain_score:32.8 name:Lipase_GDSL; db:Pfam-A.hmm|PF13472.6 evalue:1.3e-14 score:54.2 best_domain_score:53.7 name:Lipase_GDSL_2;
sp YES;
55372 55464 signal_peptide
ID metaerg.pl|11412
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
56263 57027 CDS
ID metaerg.pl|11413
allgo_ids GO:0042597; GO:0031419; GO:0015889;
allko_ids K02016; K06858;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725373.1 1 254 evalue:9.0e-105 qcov:100.00 identity:70.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF01497;
pfam_desc Periplasmic binding protein;
pfam_id Peripla_BP_2;
pfam_target db:Pfam-A.hmm|PF01497.18 evalue:1.1e-32 score:112.8 best_domain_score:112.5 name:Peripla_BP_2;
sprot_desc Vitamin B12-binding protein;
sprot_id sp|A5F5P5|BTUF_VIBC3;
sprot_target db:uniprot_sprot|sp|A5F5P5|BTUF_VIBC3 2 246 evalue:3.5e-23 qcov:96.50 identity:29.70;
57249 58583 CDS
ID metaerg.pl|11414
allec_ids 2.8.4.4; 2.1.1.- 2.8.1.-;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0103039; GO:0018339; GO:0006400;
allko_ids K14441;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725372.1 1 441 evalue:1.0e-212 qcov:99.30 identity:80.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF04055; PF18693; PF00919;
pfam_desc Radical SAM superfamily; TRAM domain; Uncharacterized protein family UPF0004;
pfam_id Radical_SAM; TRAM_2; UPF0004;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:2.9e-28 score:98.5 best_domain_score:97.1 name:Radical_SAM; db:Pfam-A.hmm|PF18693.1 evalue:3.2e-19 score:68.1 best_domain_score:67.0 name:TRAM_2; db:Pfam-A.hmm|PF00919.20 evalue:7.5e-21 score:73.3 best_domain_score:72.4 name:UPF0004;
sprot_desc Ribosomal protein S12 methylthiotransferase RimO;
sprot_id sp|Q2Y7J7|RIMO_NITMU;
sprot_target db:uniprot_sprot|sp|Q2Y7J7|RIMO_NITMU 1 443 evalue:5.7e-170 qcov:99.80 identity:64.70;
tigrfam_acc TIGR00089; TIGR01125;
tigrfam_desc radical SAM methylthiotransferase, MiaB/RimO family; ribosomal protein S12 methylthiotransferase RimO;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00089; TIGR01125;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00089 evalue:2e-99 score:332.5 best_domain_score:332.3 name:TIGR00089; db:TIGRFAMs.hmm|TIGR01125 evalue:8.7e-165 score:548.1 best_domain_score:547.9 name:TIGR01125;
58662 59861 CDS
ID metaerg.pl|11415
allgo_ids GO:0071949;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068299164.1 1 381 evalue:3.6e-108 qcov:95.50 identity:54.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF01494;
pfam_desc FAD binding domain;
pfam_id FAD_binding_3;
pfam_target db:Pfam-A.hmm|PF01494.19 evalue:4.3e-13 score:48.5 best_domain_score:47.3 name:FAD_binding_3;
61229 59940 CDS
ID metaerg.pl|11416
allec_ids 2.7.8.-;
allgo_ids GO:0003824; GO:0016021; GO:0005886; GO:0008808; GO:0032049; GO:0008654;
allko_ids K06131;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas hydrothermalis;
genomedb_acc GCF_002442575.1;
genomedb_target db:genomedb|GCF_002442575.1|WP_096923415.1 25 429 evalue:6.2e-114 qcov:94.40 identity:49.90;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metacyc_pathway_id PHOSLIPSYN-PWY; TEICHOICACID-PWY; PWY4FS-4; PHOSLIPSYN2-PWY; PWY-5668; PWY-6385;
metacyc_pathway_name superpathway of phospholipid biosynthesis I (bacteria);; poly(glycerol phosphate) wall teichoic acid biosynthesis;; phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; cardiolipin biosynthesis I;; peptidoglycan biosynthesis III (mycobacteria);;
metacyc_pathway_type Phospholipid-Biosynthesis; Super-Pathways;; Teichoic-Acids-Biosynthesis;; PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00614; PF13091;
pfam_desc Phospholipase D Active site motif; PLD-like domain;
pfam_id PLDc; PLDc_2;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:6e-12 score:44.5 best_domain_score:26.6 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:9.4e-45 score:151.0 best_domain_score:96.3 name:PLDc_2;
sprot_desc Cardiolipin synthase 2;
sprot_id sp|Q81TR2|CLS2_BACAN;
sprot_target db:uniprot_sprot|sp|Q81TR2|CLS2_BACAN 76 417 evalue:9.2e-56 qcov:79.70 identity:33.30;
tm_num 1;
61229 59940 transmembrane_helix
ID metaerg.pl|11417
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i59973-60026o;
64756 61412 CDS
ID metaerg.pl|11418
allgo_ids GO:0016787;
allko_ids K01303; K01730;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725368.1 1 1113 evalue:0.0e+00 qcov:99.90 identity:75.30;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF01979; PF07969; PF00930; PF10647; PF07676;
pfam_desc Amidohydrolase family; Amidohydrolase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; Lipoprotein LpqB beta-propeller domain; WD40-like Beta Propeller Repeat;
pfam_id Amidohydro_1; Amidohydro_3; DPPIV_N; Gmad1; PD40;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:7e-20 score:70.8 best_domain_score:59.7 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:2e-10 score:39.9 best_domain_score:27.3 name:Amidohydro_3; db:Pfam-A.hmm|PF00930.21 evalue:3.5e-13 score:48.3 best_domain_score:7.4 name:DPPIV_N; db:Pfam-A.hmm|PF10647.9 evalue:2.9e-05 score:23.2 best_domain_score:11.9 name:Gmad1; db:Pfam-A.hmm|PF07676.12 evalue:7.4e-38 score:127.0 best_domain_score:29.9 name:PD40;
sp YES;
tm_num 1;
61412 61498 signal_peptide
ID metaerg.pl|11419
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
64756 61412 transmembrane_helix
ID metaerg.pl|11420
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i61424-61483o;
65737 64766 CDS
ID metaerg.pl|11421
allec_ids 3.1.3.5;
allgo_ids GO:0000166; GO:0000287; GO:0005737; GO:0008253; GO:0009117; GO:0005829; GO:0046085; GO:0009128;
allko_ids K01081;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725366.1 1 301 evalue:1.6e-151 qcov:93.20 identity:89.30;
kegg_pathway_id 00240; 00230; 00760;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Nicotinate and nicotinamide metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metacyc_pathway_id PWY-6353; URSIN-PWY; PWY-5695; PWY-5381; PWY-5044;
metacyc_pathway_name purine nucleotides degradation II (aerobic);; ureide biosynthesis;; inosine 5'-phosphate degradation;; pyridine nucleotide cycling (plants);; purine nucleotides degradation I (plants);;
metacyc_pathway_type Purine-Degradation; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; Purine-Degradation;; NAD-Metabolism;; Purine-Degradation; Super-Pathways;;
pfam_acc PF06189;
pfam_desc 5'-nucleotidase;
pfam_id 5-nucleotidase;
pfam_target db:Pfam-A.hmm|PF06189.12 evalue:3.8e-109 score:363.0 best_domain_score:362.2 name:5-nucleotidase;
sprot_desc Cytosolic 5'-nucleotidase 1A;
sprot_id sp|A3KFX0|5NT1A_MOUSE;
sprot_target db:uniprot_sprot|sp|A3KFX0|5NT1A_MOUSE 13 299 evalue:1.6e-57 qcov:88.90 identity:45.30;
66595 65825 CDS
ID metaerg.pl|11422
allec_ids 2.7.1.23;
allgo_ids GO:0003951; GO:0006741; GO:0005737; GO:0005524; GO:0046872; GO:0019674;
allko_ids K00858;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725365.1 1 256 evalue:1.8e-100 qcov:100.00 identity:73.40;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metacyc_pathway_id NADPHOS-DEPHOS-PWY; PWY-5083;
metacyc_pathway_name NAD phosphorylation and dephosphorylation;; NAD/NADH phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; NAD-Metabolism;;
pfam_acc PF01513;
pfam_desc ATP-NAD kinase;
pfam_id NAD_kinase;
pfam_target db:Pfam-A.hmm|PF01513.21 evalue:8.1e-18 score:63.8 best_domain_score:63.1 name:NAD_kinase;
sprot_desc NAD kinase;
sprot_id sp|A7HWM6|NADK_PARL1;
sprot_target db:uniprot_sprot|sp|A7HWM6|NADK_PARL1 7 255 evalue:4.4e-74 qcov:97.30 identity:56.20;
71541 66592 CDS
ID metaerg.pl|11423
allec_ids 1.4.1.2;
allgo_ids GO:0004352; GO:0019551;
allko_ids K15371;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725364.1 1 1648 evalue:0.0e+00 qcov:99.90 identity:74.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
metacyc_pathway_id GLUTAMATE-DEG1-PWY; PROPFERM-PWY;
metacyc_pathway_name L-glutamate degradation I;; L-alanine fermentation to propanoate and acetate;;
metacyc_pathway_type GLUTAMATE-DEG;; Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;;
pfam_acc PF05088;
pfam_desc Bacterial NAD-glutamate dehydrogenase;
pfam_id Bac_GDH;
pfam_target db:Pfam-A.hmm|PF05088.12 evalue:0 score:2136.7 best_domain_score:2133.7 name:Bac_GDH;
sprot_desc NAD-specific glutamate dehydrogenase;
sprot_id sp|E1V4J5|DHE2_HALED;
sprot_target db:uniprot_sprot|sp|E1V4J5|DHE2_HALED 32 1649 evalue:0.0e+00 qcov:98.10 identity:44.90;
72802 71639 CDS
ID metaerg.pl|11424
allec_ids 1.3.8.1;
allgo_ids GO:0016627; GO:0055114; GO:0003995; GO:0004085; GO:0050660; GO:0019605;
allko_ids K06446; K00248; K11410; K00253; K09478; K00232; K00252; K00120; K14448; K00249; K11731; K11538; K08098;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725363.1 1 387 evalue:2.4e-197 qcov:100.00 identity:91.00;
kegg_pathway_id 00592; 00640; 00650; 00903; 01040; 00380; 00632; 00361; 00410; 00071; 00930; 00626; 01031; 00280; 00310; 00624;
kegg_pathway_name alpha-Linolenic acid metabolism; Propanoate metabolism; Butanoate metabolism; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; Tryptophan metabolism; Benzoate degradation via CoA ligation; gamma-Hexachlorocyclohexane degradation; beta-Alanine metabolism; Fatty acid metabolism; Caprolactam degradation; Naphthalene and anthracene degradation; Glycan structures - biosynthesis 2; Valine, leucine and isoleucine degradation; Lysine degradation; 1- and 2-Methylnaphthalene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:5.4e-52 score:175.2 best_domain_score:174.6 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:6.4e-28 score:96.9 best_domain_score:96.2 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:1.4e-23 score:82.2 best_domain_score:80.9 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:1.9e-36 score:124.4 best_domain_score:123.3 name:Acyl-CoA_dh_N;
sprot_desc Acyl-CoA dehydrogenase, short-chain specific;
sprot_id sp|P52042|ACDS_CLOAB;
sprot_target db:uniprot_sprot|sp|P52042|ACDS_CLOAB 1 380 evalue:1.3e-96 qcov:98.20 identity:48.70;
73302 73216 tRNA
ID metaerg.pl|11425
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
name tRNA_Ser_cag;
74443 73727 CDS
ID metaerg.pl|11426
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725362.1 1 235 evalue:2.9e-105 qcov:98.70 identity:73.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF02586;
pfam_desc SOS response associated peptidase (SRAP);
pfam_id SRAP;
pfam_target db:Pfam-A.hmm|PF02586.14 evalue:3.9e-41 score:140.2 best_domain_score:140.1 name:SRAP;
74560 74475 tRNA
ID metaerg.pl|11427
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
name tRNA_Leu_tag;
75351 74665 CDS
ID metaerg.pl|11428
allgo_ids GO:0004671; GO:0006481; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Fontimonas;s__Fontimonas thermophila;
genomedb_acc GCF_900113085.1;
genomedb_target db:genomedb|GCF_900113085.1|WP_091533180.1 1 227 evalue:6.4e-110 qcov:99.60 identity:78.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF06966; PF04140; PF04191; PF02544;
pfam_desc Protein of unknown function (DUF1295); Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; Phospholipid methyltransferase ; 3-oxo-5-alpha-steroid 4-dehydrogenase;
pfam_id DUF1295; ICMT; PEMT; Steroid_dh;
pfam_target db:Pfam-A.hmm|PF06966.12 evalue:3.4e-11 score:42.3 best_domain_score:42.3 name:DUF1295; db:Pfam-A.hmm|PF04140.14 evalue:8.6e-05 score:22.1 best_domain_score:22.1 name:ICMT; db:Pfam-A.hmm|PF04191.13 evalue:8.2e-07 score:28.6 best_domain_score:28.6 name:PEMT; db:Pfam-A.hmm|PF02544.16 evalue:1.4e-06 score:27.6 best_domain_score:27.6 name:Steroid_dh;
tm_num 5;
75351 74665 transmembrane_helix
ID metaerg.pl|11429
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
topology i74725-74793o74803-74862i74920-74988o75016-75075i75199-75267o;
77581 75383 CDS
ID metaerg.pl|11430
allec_ids 3.4.15.5;
allgo_ids GO:0004222; GO:0006508; GO:0005829; GO:0030288; GO:0004180; GO:0046872; GO:0008237;
allko_ids K01284;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725361.1 5 729 evalue:1.3e-308 qcov:99.00 identity:71.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF01432;
pfam_desc Peptidase family M3;
pfam_id Peptidase_M3;
pfam_target db:Pfam-A.hmm|PF01432.20 evalue:1.7e-113 score:379.5 best_domain_score:379.1 name:Peptidase_M3;
sp YES;
sprot_desc Dipeptidyl carboxypeptidase;
sprot_id sp|P27236|DCP_SALTY;
sprot_target db:uniprot_sprot|sp|P27236|DCP_SALTY 50 727 evalue:3.3e-162 qcov:92.60 identity:42.90;
75383 75427 lipoprotein_signal_peptide
ID metaerg.pl|11431
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
78127 77672 CDS
ID metaerg.pl|11432
allec_ids 3.5.4.33;
allgo_ids GO:0002100; GO:0008251; GO:0052717; GO:0008270;
allko_ids K01485; K11991;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049725360.1 4 149 evalue:2.9e-50 qcov:96.70 identity:70.50;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
pfam_acc PF00383; PF14437;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase;
pfam_id dCMP_cyt_deam_1; MafB19-deam;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:5.4e-28 score:96.1 best_domain_score:95.8 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:2.2e-31 score:107.7 best_domain_score:107.5 name:MafB19-deam;
sprot_desc tRNA-specific adenosine deaminase;
sprot_id sp|Q8XA44|TADA_ECO57;
sprot_target db:uniprot_sprot|sp|Q8XA44|TADA_ECO57 5 150 evalue:2.5e-40 qcov:96.70 identity:56.80;
78292 79791 CDS
ID metaerg.pl|11433
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
sp YES;
78292 78351 signal_peptide
ID metaerg.pl|11434
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0391246; 59.1709; 0.000941702; 0.11421; 59.3251;
>Feature NODE_86_length_79778_cov_55.2095
1623 148 CDS
ID metaerg.pl|11435
allec_ids 1.2.1.32;
allgo_ids GO:0016491; GO:0055114; GO:0047102; GO:0019439;
allko_ids K13821; K10217; K00318; K00130; K00155; K09472; K00294; K00151; K00128;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Novosphingobium;s__Novosphingobium acidiphilum;
genomedb_acc GCF_000429005.1;
genomedb_target db:genomedb|GCF_000429005.1|WP_028640547.1 5 487 evalue:2.1e-190 qcov:98.40 identity:69.60;
kegg_pathway_id 00350; 00650; 00640; 00220; 00903; 00330; 00620; 00561; 00362; 00380; 00120; 00641; 00410; 00631; 00340; 00071; 00251; 00260; 00622; 00626; 00280; 00281; 00624; 00310; 00010;
kegg_pathway_name Tyrosine metabolism; Butanoate metabolism; Propanoate metabolism; Urea cycle and metabolism of amino groups; Limonene and pinene degradation; Arginine and proline metabolism; Pyruvate metabolism; Glycerolipid metabolism; Benzoate degradation via hydroxylation; Tryptophan metabolism; Bile acid biosynthesis; 3-Chloroacrylic acid degradation; beta-Alanine metabolism; 1,2-Dichloroethane degradation; Histidine metabolism; Fatty acid metabolism; Glutamate metabolism; Glycine, serine and threonine metabolism; Toluene and xylene degradation; Naphthalene and anthracene degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; 1- and 2-Methylnaphthalene degradation; Lysine degradation; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id PWY-6309; PWY-5652; TRYPTOPHAN-DEGRADATION-1; PWY-5654;
metacyc_pathway_name L-tryptophan degradation XI (mammalian, via kynurenine);; 2-amino-3-carboxymuconate semialdehyde degradation to glutaryl-CoA;; L-tryptophan degradation III (eukaryotic);; 2-amino-3-carboxymuconate semialdehyde degradation to 2-hydroxypentadienoate;;
metacyc_pathway_type Super-Pathways; TRYPTOPHAN-DEG;; CARBOXYLATES-DEG;; Super-Pathways; TRYPTOPHAN-DEG;; CARBOXYLATES-DEG;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:7.4e-146 score:485.5 best_domain_score:485.2 name:Aldedh;
sprot_desc 2-aminomuconic 6-semialdehyde dehydrogenase;
sprot_id sp|Q9KWS5|AMNC_PSESP;
sprot_target db:uniprot_sprot|sp|Q9KWS5|AMNC_PSESP 17 490 evalue:6.7e-79 qcov:96.50 identity:37.10;
2961 1675 CDS
ID metaerg.pl|11436
allec_ids 6.3.4.12;
allgo_ids GO:0004356; GO:0006807; GO:0005524; GO:0047942; GO:0047943; GO:0006542;
allko_ids K01915;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__RAAP-2;s__RAAP-2 sp003152215;
genomedb_acc GCA_003152215.1;
genomedb_target db:genomedb|GCA_003152215.1|PLZP01000088.1_8 2 427 evalue:1.0e-148 qcov:99.50 identity:60.00;
kegg_pathway_id 00251; 02020; 00910; 00550;
kegg_pathway_name Glutamate metabolism; Two-component system - General; Nitrogen metabolism; Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00120;
pfam_desc Glutamine synthetase, catalytic domain;
pfam_id Gln-synt_C;
pfam_target db:Pfam-A.hmm|PF00120.24 evalue:4.2e-80 score:268.6 best_domain_score:268.3 name:Gln-synt_C;
sprot_desc Glutamate--methylamine ligase;
sprot_id sp|A9ZPH9|GMAS_METMY;
sprot_target db:uniprot_sprot|sp|A9ZPH9|GMAS_METMY 52 428 evalue:2.5e-45 qcov:88.10 identity:33.00;
4348 3062 CDS
ID metaerg.pl|11437
allec_ids 1.14.-.-;
allgo_ids GO:0005506; GO:0016705; GO:0020037; GO:0055114; GO:0004497;
allko_ids K00517;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA1151;f__Bin127;g__GCA-002725925;s__GCA-002725925 sp002714085;
genomedb_acc GCA_002714085.1;
genomedb_target db:genomedb|GCA_002714085.1|MBF06177.1 19 425 evalue:8.0e-154 qcov:95.10 identity:63.90;
kegg_pathway_id 00940; 00361; 00626; 00903;
kegg_pathway_name Phenylpropanoid biosynthesis; gamma-Hexachlorocyclohexane degradation; Naphthalene and anthracene degradation; Limonene and pinene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id PWY-699; PWY-6442; PWY-2582; PWY-6544; PWY-2961; PWY-1381; PWY-5479; PWY-6494; FLUORENE-DEG-9-ONE-PWY; P481-PWY;
metacyc_pathway_name brassinosteroid biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; brassinosteroid biosynthesis II;; superpathway of C28 brassinosteroid biosynthesis;; sesquiterpenoid phytoalexins biosynthesis;; fluorene degradation II;; 6-methoxypodophyllotoxin biosynthesis;; gibberellin inactivation III (epoxidation);; fluorene degradation I;; adamantanone degradation;;
metacyc_pathway_type Brassinosteroid-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Brassinosteroid-Biosynthesis;; Super-Pathways;; SESQUITERPENOID-SYN; TERPENOID-PHYTOALEXINS;; Fluorene-Degradation;; LIGNAN-SYN;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Fluorene-Degradation;; Other-Degradation;;
pfam_acc PF00067;
pfam_desc Cytochrome P450;
pfam_id p450;
pfam_target db:Pfam-A.hmm|PF00067.22 evalue:2.2e-21 score:75.4 best_domain_score:67.9 name:p450;
sprot_desc Putative cytochrome P450 126;
sprot_id sp|P63712|CP126_MYCBO;
sprot_target db:uniprot_sprot|sp|P63712|CP126_MYCBO 22 425 evalue:1.5e-69 qcov:94.40 identity:40.50;
4460 5191 CDS
ID metaerg.pl|11438
allgo_ids GO:0016787;
allko_ids K01663; K01656; K01657; K03342; K02619; K01664; K01665; K01951; K01658; K13501; K13497; K13950;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces aureus_B;
genomedb_acc GCF_000725495.1;
genomedb_target db:genomedb|GCF_000725495.1|WP_037622203.1 1 235 evalue:1.8e-57 qcov:96.70 identity:50.60;
kegg_pathway_id 00251; 00620; 00983; 02020; 00230; 00790; 00400;
kegg_pathway_name Glutamate metabolism; Pyruvate metabolism; Drug metabolism - other enzymes; Two-component system - General; Purine metabolism; Folate biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00117; PF07722;
pfam_desc Glutamine amidotransferase class-I; Peptidase C26;
pfam_id GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00117.28 evalue:6e-12 score:45.0 best_domain_score:43.8 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:4.9e-08 score:32.2 best_domain_score:27.7 name:Peptidase_C26;
5534 5202 CDS
ID metaerg.pl|11439
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
5756 6709 CDS
ID metaerg.pl|11440
allgo_ids GO:0003700; GO:0006355; GO:0043565;
allko_ids K00567; K10778; K13530;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441072.1 4 313 evalue:1.9e-107 qcov:97.80 identity:64.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF01965; PF12833; PF00165;
pfam_desc DJ-1/PfpI family; Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id DJ-1_PfpI; HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF01965.24 evalue:8.7e-12 score:44.4 best_domain_score:44.1 name:DJ-1_PfpI; db:Pfam-A.hmm|PF12833.7 evalue:3.1e-18 score:65.1 best_domain_score:64.4 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:5.5e-15 score:54.3 best_domain_score:32.7 name:HTH_AraC;
tm_num 1;
5756 6709 transmembrane_helix
ID metaerg.pl|11441
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology i6068-6136o;
6730 7797 CDS
ID metaerg.pl|11442
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Dermatophilaceae;g__UBA4719;s__UBA4719 sp002404345;
genomedb_acc GCA_002404345.1;
genomedb_target db:genomedb|GCA_002404345.1|DHJN01000077.1_5 19 355 evalue:8.5e-93 qcov:94.90 identity:52.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF01636;
pfam_desc Phosphotransferase enzyme family;
pfam_id APH;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:2.7e-07 score:30.0 best_domain_score:29.4 name:APH;
7794 8597 CDS
ID metaerg.pl|11443
allgo_ids GO:0008168;
allko_ids K00568; K03183; K00599;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__PALSA-505;s__PALSA-505 sp003168255;
genomedb_acc GCA_003168255.1;
genomedb_target db:genomedb|GCA_003168255.1|PMSU01000036.1_49 11 262 evalue:1.1e-39 qcov:94.40 identity:43.10;
kegg_pathway_id 00380; 00150; 00340; 00350; 00130; 00626; 00450;
kegg_pathway_name Tryptophan metabolism; Androgen and estrogen metabolism; Histidine metabolism; Tyrosine metabolism; Ubiquinone biosynthesis; Naphthalene and anthracene degradation; Selenoamino acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF08241; PF08242; PF13489; PF13649; PF13847; PF01209;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; ubiE/COQ5 methyltransferase family;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:9.3e-23 score:79.9 best_domain_score:79.1 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:2.8e-12 score:46.5 best_domain_score:45.7 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:1.5e-16 score:59.9 best_domain_score:59.4 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:3.9e-18 score:65.2 best_domain_score:64.3 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.8e-11 score:43.3 best_domain_score:42.0 name:Methyltransf_31; db:Pfam-A.hmm|PF01209.18 evalue:7.1e-10 score:37.8 best_domain_score:36.2 name:Ubie_methyltran;
8644 8943 CDS
ID metaerg.pl|11444
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
tm_num 3;
8644 8943 transmembrane_helix
ID metaerg.pl|11445
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology o8656-8715i8749-8817o8860-8928i;
9084 10103 CDS
ID metaerg.pl|11446
allgo_ids GO:0005886;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667305.1 30 333 evalue:3.5e-72 qcov:89.70 identity:52.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF11258; PF17479;
pfam_desc Protein of unknown function (DUF3048) N-terminal domain; Protein of unknown function (DUF3048) C-terminal domain;
pfam_id DUF3048; DUF3048_C;
pfam_target db:Pfam-A.hmm|PF11258.8 evalue:2.9e-29 score:101.3 best_domain_score:100.8 name:DUF3048; db:Pfam-A.hmm|PF17479.2 evalue:6e-23 score:80.6 best_domain_score:80.0 name:DUF3048_C;
sp YES;
sprot_desc Putative lipoprotein YerB;
sprot_id sp|O34968|YERB_BACSU;
sprot_target db:uniprot_sprot|sp|O34968|YERB_BACSU 43 332 evalue:9.5e-24 qcov:85.50 identity:31.20;
tm_num 1;
9084 9152 signal_peptide
ID metaerg.pl|11447
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
9084 10103 transmembrane_helix
ID metaerg.pl|11448
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology i9102-9161o;
12511 10148 CDS
ID metaerg.pl|11449
allec_ids 1.2.4.1;
allgo_ids GO:0004739; GO:0006096;
allko_ids K00615; K00163;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora phaseoli;
genomedb_acc GCF_900109115.1;
genomedb_target db:genomedb|GCF_900109115.1|WP_092375239.1 9 787 evalue:0.0e+00 qcov:99.00 identity:75.30;
kegg_pathway_id 00020; 00030; 00010; 00710; 00290; 00650; 00620; 00252; 01051;
kegg_pathway_name Citrate cycle (TCA cycle); Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Valine, leucine and isoleucine biosynthesis; Butanoate metabolism; Pyruvate metabolism; Alanine and aspartate metabolism; Biosynthesis of ansamycins;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id PWY-5464; PWY-5173; PYRUVDEHYD-PWY;
metacyc_pathway_name superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of acetyl-CoA biosynthesis;; pyruvate decarboxylation to acetyl CoA;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Acetyl-CoA-Biosynthesis; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;;
pfam_acc PF17831; PF00456;
pfam_desc Pyruvate dehydrogenase E1 component middle domain; Transketolase, thiamine diphosphate binding domain;
pfam_id PDH_E1_M; Transketolase_N;
pfam_target db:Pfam-A.hmm|PF17831.1 evalue:3.8e-14 score:52.0 best_domain_score:51.4 name:PDH_E1_M; db:Pfam-A.hmm|PF00456.21 evalue:2.6e-19 score:68.6 best_domain_score:42.8 name:Transketolase_N;
sprot_desc Pyruvate dehydrogenase E1 component;
sprot_id sp|Q8NNF6|ODP1_CORGL;
sprot_target db:uniprot_sprot|sp|Q8NNF6|ODP1_CORGL 3 785 evalue:5.1e-44 qcov:99.50 identity:26.60;
14073 12589 CDS
ID metaerg.pl|11450
allec_ids 1.2.1.8;
allgo_ids GO:0016491; GO:0055114; GO:0008802; GO:0046872; GO:0019285;
allko_ids K13821; K10217; K00155; K00130; K00318; K00294; K00151; K00128; K09472;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Haloactinopolyspora;s__Haloactinopolyspora alba;
genomedb_acc GCF_003014555.1;
genomedb_target db:genomedb|GCF_003014555.1|WP_106538429.1 4 493 evalue:9.6e-236 qcov:99.20 identity:81.00;
kegg_pathway_id 00260; 00626; 00622; 00280; 00281; 00310; 00624; 00010; 00410; 00631; 00340; 00071; 00251; 00380; 00120; 00641; 00350; 00650; 00640; 00220; 00903; 00330; 00620; 00561; 00362;
kegg_pathway_name Glycine, serine and threonine metabolism; Naphthalene and anthracene degradation; Toluene and xylene degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis; beta-Alanine metabolism; 1,2-Dichloroethane degradation; Histidine metabolism; Fatty acid metabolism; Glutamate metabolism; Tryptophan metabolism; Bile acid biosynthesis; 3-Chloroacrylic acid degradation; Tyrosine metabolism; Butanoate metabolism; Propanoate metabolism; Urea cycle and metabolism of amino groups; Limonene and pinene degradation; Arginine and proline metabolism; Pyruvate metabolism; Glycerolipid metabolism; Benzoate degradation via hydroxylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id P542-PWY; PWY-3722; CHOLINE-BETAINE-ANA-PWY; PWY1F-353; BETSYN-PWY;
metacyc_pathway_name choline-O-sulfate degradation;; glycine betaine biosynthesis II (Gram-positive bacteria);; choline degradation I;; glycine betaine biosynthesis III (plants);; glycine betaine biosynthesis I (Gram-negative bacteria);;
metacyc_pathway_type Choline-Degradation; Super-Pathways;; Betaine-Biosynthesis;; Choline-Degradation;; Betaine-Biosynthesis;; Betaine-Biosynthesis;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:1.5e-160 score:533.9 best_domain_score:533.7 name:Aldedh;
sprot_desc Betaine aldehyde dehydrogenase;
sprot_id sp|P71016|GBSA_BACSU;
sprot_target db:uniprot_sprot|sp|P71016|GBSA_BACSU 6 490 evalue:1.5e-155 qcov:98.20 identity:56.60;
16213 14135 CDS
ID metaerg.pl|11451
allgo_ids GO:0016020; GO:0022857; GO:0071705; GO:0016021; GO:0005886; GO:0019285;
allko_ids K02168;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Haloactinopolyspora;s__Haloactinopolyspora alba;
genomedb_acc GCF_003014555.1;
genomedb_target db:genomedb|GCF_003014555.1|WP_106538430.1 1 679 evalue:5.8e-263 qcov:98.10 identity:68.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF02028;
pfam_desc BCCT, betaine/carnitine/choline family transporter;
pfam_id BCCT;
pfam_target db:Pfam-A.hmm|PF02028.17 evalue:2.7e-168 score:559.6 best_domain_score:559.4 name:BCCT;
sprot_desc High-affinity choline transport protein;
sprot_id sp|P0ABD0|BETT_ECO57;
sprot_target db:uniprot_sprot|sp|P0ABD0|BETT_ECO57 13 682 evalue:3.7e-216 qcov:96.80 identity:58.80;
tigrfam_acc TIGR00842;
tigrfam_desc transporter, betaine/carnitine/choline transporter (BCCT) family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name bcct;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00842 evalue:6.2e-160 score:532.0 best_domain_score:531.7 name:TIGR00842;
tm_num 12;
16213 14135 transmembrane_helix
ID metaerg.pl|11452
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology i14201-14269o14312-14380i14438-14506o14591-14659i14741-14809o14852-14920i14957-15025o15107-15175i15212-15271o15362-15430i15518-15586o15596-15664i;
17707 16304 CDS
ID metaerg.pl|11453
allec_ids 4.1.1.105;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0016831; GO:0006520;
allko_ids K01593;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Prauserella_A;s__Prauserella_A coralliicola;
genomedb_acc GCA_003202275.1;
genomedb_target db:genomedb|GCA_003202275.1|PXY26217.1 51 466 evalue:1.5e-108 qcov:89.10 identity:54.20;
kegg_pathway_id 00380; 00360; 00340; 00350;
kegg_pathway_name Tryptophan metabolism; Phenylalanine metabolism; Histidine metabolism; Tyrosine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00155; PF00266; PF00282;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Pyridoxal-dependent decarboxylase conserved domain;
pfam_id Aminotran_1_2; Aminotran_5; Pyridoxal_deC;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:0.00017 score:20.1 best_domain_score:19.0 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:5.9e-07 score:28.0 best_domain_score:27.1 name:Aminotran_5; db:Pfam-A.hmm|PF00282.19 evalue:6.5e-57 score:192.2 best_domain_score:191.6 name:Pyridoxal_deC;
sprot_desc Tryptophan decarboxylase;
sprot_id sp|A7B1V0|TRPDC_RUMGV;
sprot_target db:uniprot_sprot|sp|A7B1V0|TRPDC_RUMGV 82 460 evalue:8.7e-52 qcov:81.20 identity:31.80;
17921 18391 CDS
ID metaerg.pl|11454
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Pseudonocardia;s__Pseudonocardia acaciae;
genomedb_acc GCF_000620785.1;
genomedb_target db:genomedb|GCF_000620785.1|WP_084210573.1 6 154 evalue:1.1e-28 qcov:95.50 identity:47.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF01037; PF08279; PF13412; PF01022; PF13404; PF09339; PF12802;
pfam_desc Lrp/AsnC ligand binding domain; HTH domain; Winged helix-turn-helix DNA-binding; Bacterial regulatory protein, arsR family; AsnC-type helix-turn-helix domain; IclR helix-turn-helix domain; MarR family;
pfam_id AsnC_trans_reg; HTH_11; HTH_24; HTH_5; HTH_AsnC-type; HTH_IclR; MarR_2;
pfam_target db:Pfam-A.hmm|PF01037.21 evalue:6.7e-15 score:54.1 best_domain_score:53.5 name:AsnC_trans_reg; db:Pfam-A.hmm|PF08279.12 evalue:7.3e-07 score:28.3 best_domain_score:27.4 name:HTH_11; db:Pfam-A.hmm|PF13412.6 evalue:1.7e-10 score:39.6 best_domain_score:39.0 name:HTH_24; db:Pfam-A.hmm|PF01022.20 evalue:1e-05 score:24.5 best_domain_score:23.8 name:HTH_5; db:Pfam-A.hmm|PF13404.6 evalue:4.3e-13 score:48.1 best_domain_score:47.3 name:HTH_AsnC-type; db:Pfam-A.hmm|PF09339.10 evalue:3.1e-07 score:29.3 best_domain_score:28.3 name:HTH_IclR; db:Pfam-A.hmm|PF12802.7 evalue:2.3e-07 score:29.8 best_domain_score:28.2 name:MarR_2;
18926 18360 CDS
ID metaerg.pl|11455
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__SZUA-35;g__SZUA-35;s__SZUA-35 sp003231975;
genomedb_acc GCA_003231975.1;
genomedb_target db:genomedb|GCA_003231975.1|QIKW01000080.1_2 12 169 evalue:4.4e-40 qcov:84.00 identity:54.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00392; PF13463; PF01047; PF12802;
pfam_desc Bacterial regulatory proteins, gntR family; Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id GntR; HTH_27; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF00392.21 evalue:4.1e-05 score:22.4 best_domain_score:20.9 name:GntR; db:Pfam-A.hmm|PF13463.6 evalue:2.4e-05 score:24.0 best_domain_score:22.4 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:4.1e-16 score:57.9 best_domain_score:56.6 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:6.8e-07 score:28.3 best_domain_score:27.1 name:MarR_2;
19681 18926 CDS
ID metaerg.pl|11456
allgo_ids GO:0016787; GO:0016740; GO:0006541;
allko_ids K07010;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Leucobacter;s__Leucobacter sp000633415;
genomedb_acc GCF_000633415.1;
genomedb_target db:genomedb|GCF_000633415.1|WP_081809920.1 3 238 evalue:5.7e-51 qcov:94.00 identity:49.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00117; PF07722;
pfam_desc Glutamine amidotransferase class-I; Peptidase C26;
pfam_id GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00117.28 evalue:3.2e-13 score:49.1 best_domain_score:48.0 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:5e-58 score:195.6 best_domain_score:195.5 name:Peptidase_C26;
sprot_desc Putative glutamine amidotransferase-like protein YvdE;
sprot_id sp|Q9CE00|YVDE_LACLA;
sprot_target db:uniprot_sprot|sp|Q9CE00|YVDE_LACLA 39 220 evalue:7.8e-23 qcov:72.50 identity:36.40;
21595 20192 CDS
ID metaerg.pl|11457
allec_ids 1.1.99.-;
allgo_ids GO:0003824; GO:0050660; GO:0031234; GO:0005739; GO:0051990; GO:0004458; GO:0071949; GO:0019516; GO:0022904;
allko_ids K03777; K00102; K00075; K00004; K18204;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__UBA2991;f__UBA2991;g__HRBIN29;s__HRBIN29 sp002898215;
genomedb_acc GCA_002898215.1;
genomedb_target db:genomedb|GCA_002898215.1|GBD22405.1 1 467 evalue:3.1e-135 qcov:100.00 identity:59.50;
kegg_pathway_id 00530; 00650; 00620;
kegg_pathway_name Aminosugars metabolism; Butanoate metabolism; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id PWY-6509; P421-PWY; 12DICHLORETHDEG-PWY; P221-PWY;
metacyc_pathway_name methanol oxidation to formaldehyde III;; 4-nitrotoluene degradation I;; 1,2-dichloroethane degradation;; octane oxidation;;
metacyc_pathway_type Methanol-Oxidation;; 4-Nitrotoluene-Degradation;; CHLORINATED-COMPOUNDS-DEG;; Other-Degradation;;
pfam_acc PF02913; PF01565; PF00941;
pfam_desc FAD linked oxidases, C-terminal domain; FAD binding domain ; FAD binding domain in molybdopterin dehydrogenase;
pfam_id FAD-oxidase_C; FAD_binding_4; FAD_binding_5;
pfam_target db:Pfam-A.hmm|PF02913.19 evalue:6e-48 score:162.9 best_domain_score:162.1 name:FAD-oxidase_C; db:Pfam-A.hmm|PF01565.23 evalue:8.9e-34 score:115.4 best_domain_score:115.4 name:FAD_binding_4; db:Pfam-A.hmm|PF00941.21 evalue:0.00014 score:20.9 best_domain_score:20.9 name:FAD_binding_5;
sprot_desc D-2-hydroxyglutarate dehydrogenase, mitochondrial;
sprot_id sp|Q1JPD3|D2HDH_BOVIN;
sprot_target db:uniprot_sprot|sp|Q1JPD3|D2HDH_BOVIN 2 466 evalue:1.5e-64 qcov:99.60 identity:36.80;
22748 21708 CDS
ID metaerg.pl|11458
allgo_ids GO:0016020; GO:0022857; GO:0055085;
allko_ids K01995; K01998; K06861; K01997; K02057;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__SZUA-35;g__SZUA-35;s__SZUA-35 sp003231975;
genomedb_acc GCA_003231975.1;
genomedb_target db:genomedb|GCA_003231975.1|QIKW01000270.1_19 2 332 evalue:1.3e-82 qcov:95.70 identity:53.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:4.9e-24 score:84.2 best_domain_score:83.6 name:BPD_transp_2;
tm_num 7;
22748 21708 transmembrane_helix
ID metaerg.pl|11459
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology o21765-21833i21840-21908o22002-22070i22083-22151o22209-22277i22491-22559o22602-22661i;
23602 22745 CDS
ID metaerg.pl|11460
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0006865;
allko_ids K01997; K02057; K01998; K01995;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__ZC4RG35;g__SZUA-217;s__SZUA-217 sp003230435;
genomedb_acc GCA_003230435.1;
genomedb_target db:genomedb|GCA_003230435.1|QIDW01000263.1_2 2 283 evalue:5.6e-63 qcov:98.90 identity:54.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:1.9e-30 score:105.2 best_domain_score:104.7 name:BPD_transp_2;
sprot_desc High-affinity branched-chain amino acid transport system permease protein LivH;
sprot_id sp|P0AEX8|LIVH_ECO57;
sprot_target db:uniprot_sprot|sp|P0AEX8|LIVH_ECO57 4 281 evalue:2.9e-13 qcov:97.50 identity:26.50;
tm_num 8;
23602 22745 transmembrane_helix
ID metaerg.pl|11461
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology o22772-22840i22859-22912o22922-22981i23018-23086o23144-23212i23306-23365o23408-23476i23495-23563o;
24303 23602 CDS
ID metaerg.pl|11462
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015658; GO:0042941; GO:0015808;
allko_ids K02023; K11962; K02049; K01995; K01998; K10111; K05816; K01996; K02071; K06861; K10441; K02045; K11072; K05847; K02010; K02056; K01997; K02006; K02052; K02017;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA5794;g__BMS3BBIN02;s__BMS3BBIN02 sp002898115;
genomedb_acc GCA_002898115.1;
genomedb_target db:genomedb|GCA_002898115.1|GBE24275.1 1 232 evalue:2.9e-65 qcov:99.60 identity:60.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF13304; PF00005; PF12399;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; Branched-chain amino acid ATP-binding cassette transporter;
pfam_id AAA_21; ABC_tran; BCA_ABC_TP_C;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.7e-08 score:33.2 best_domain_score:15.8 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:6.1e-26 score:90.8 best_domain_score:90.3 name:ABC_tran; db:Pfam-A.hmm|PF12399.8 evalue:7.2e-06 score:25.0 best_domain_score:24.0 name:BCA_ABC_TP_C;
sprot_desc High-affinity branched-chain amino acid transport ATP-binding protein BraG;
sprot_id sp|P21630|BRAG_PSEAE;
sprot_target db:uniprot_sprot|sp|P21630|BRAG_PSEAE 1 231 evalue:2.4e-50 qcov:99.10 identity:47.20;
25037 24297 CDS
ID metaerg.pl|11463
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015188; GO:0015190; GO:0015192; GO:0005304; GO:0042941; GO:0015808; GO:1903806; GO:1903805; GO:0098713;
allko_ids K01995; K10111; K01998; K02023; K11962; K01997; K02052; K02006; K01996; K06861; K02045;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA5794;g__BMS3BBIN02;s__BMS3BBIN02 sp002898115;
genomedb_acc GCA_002898115.1;
genomedb_target db:genomedb|GCA_002898115.1|GBE24274.1 1 245 evalue:4.4e-64 qcov:99.60 identity:54.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF13304; PF09818; PF00005; PF12399;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; Predicted ATPase of the ABC class; ABC transporter; Branched-chain amino acid ATP-binding cassette transporter;
pfam_id AAA_21; ABC_ATPase; ABC_tran; BCA_ABC_TP_C;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1e-09 score:37.9 best_domain_score:23.8 name:AAA_21; db:Pfam-A.hmm|PF09818.9 evalue:0.00018 score:19.7 best_domain_score:13.1 name:ABC_ATPase; db:Pfam-A.hmm|PF00005.27 evalue:3.2e-23 score:82.0 best_domain_score:81.7 name:ABC_tran; db:Pfam-A.hmm|PF12399.8 evalue:2e-09 score:36.4 best_domain_score:34.7 name:BCA_ABC_TP_C;
sprot_desc High-affinity branched-chain amino acid transport ATP-binding protein BraF;
sprot_id sp|P21629|BRAF_PSEAE;
sprot_target db:uniprot_sprot|sp|P21629|BRAF_PSEAE 3 240 evalue:9.9e-39 qcov:96.70 identity:37.20;
26394 25051 CDS
ID metaerg.pl|11464
allko_ids K01999;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA5794;g__UBA5794;s__UBA5794 sp002418265;
genomedb_acc GCA_002418265.1;
genomedb_target db:genomedb|GCA_002418265.1|DIDS01000005.1_19 12 444 evalue:9.3e-113 qcov:96.90 identity:52.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF01094; PF13433; PF13458;
pfam_desc Receptor family ligand binding region; Periplasmic binding protein domain; Periplasmic binding protein;
pfam_id ANF_receptor; Peripla_BP_5; Peripla_BP_6;
pfam_target db:Pfam-A.hmm|PF01094.28 evalue:5.1e-18 score:64.5 best_domain_score:64.2 name:ANF_receptor; db:Pfam-A.hmm|PF13433.6 evalue:2.8e-15 score:55.4 best_domain_score:37.7 name:Peripla_BP_5; db:Pfam-A.hmm|PF13458.6 evalue:4.8e-56 score:190.1 best_domain_score:189.8 name:Peripla_BP_6;
sp YES;
25051 25113 lipoprotein_signal_peptide
ID metaerg.pl|11465
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
27749 26508 CDS
ID metaerg.pl|11466
allec_ids 1.3.99.22;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0004109; GO:0046872; GO:0006779;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668406.1 7 411 evalue:5.0e-153 qcov:98.10 identity:66.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id PWY0-1415; HEMESYN2-PWY;
metacyc_pathway_name superpathway of heme b biosynthesis from uroporphyrinogen-III;; heme b biosynthesis II (anaerobic);;
metacyc_pathway_type Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis;;
pfam_acc PF06969; PF04055;
pfam_desc HemN C-terminal domain; Radical SAM superfamily;
pfam_id HemN_C; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF06969.16 evalue:5.4e-07 score:28.8 best_domain_score:26.7 name:HemN_C; db:Pfam-A.hmm|PF04055.21 evalue:5.9e-23 score:81.3 best_domain_score:80.5 name:Radical_SAM;
sprot_desc Heme chaperone HemW;
sprot_id sp|P9WP72|HEMW_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WP72|HEMW_MYCTO 24 411 evalue:2.4e-69 qcov:93.90 identity:41.50;
tigrfam_acc TIGR00539;
tigrfam_desc putative oxygen-independent coproporphyrinogen III oxidase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemN_rel;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00539 evalue:8.6e-72 score:241.4 best_domain_score:241.0 name:TIGR00539;
28532 27843 CDS
ID metaerg.pl|11467
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668409.1 8 226 evalue:4.8e-57 qcov:95.60 identity:60.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF06897;
pfam_desc Protein of unknown function (DUF1269);
pfam_id DUF1269;
pfam_target db:Pfam-A.hmm|PF06897.12 evalue:1.5e-19 score:69.4 best_domain_score:69.4 name:DUF1269;
29189 28626 CDS
ID metaerg.pl|11468
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora phaseoli;
genomedb_acc GCF_900109115.1;
genomedb_target db:genomedb|GCF_900109115.1|WP_092383563.1 17 183 evalue:1.0e-28 qcov:89.30 identity:44.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF04239;
pfam_desc Protein of unknown function (DUF421);
pfam_id DUF421;
pfam_target db:Pfam-A.hmm|PF04239.12 evalue:5.9e-11 score:41.3 best_domain_score:40.4 name:DUF421;
sprot_desc hypothetical protein;
sprot_id sp|P75839|YCAP_ECOLI;
sprot_target db:uniprot_sprot|sp|P75839|YCAP_ECOLI 35 166 evalue:3.7e-09 qcov:70.60 identity:28.00;
tm_num 2;
29189 28626 transmembrane_helix
ID metaerg.pl|11469
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology o28683-28751i28857-28925o;
29914 29330 CDS
ID metaerg.pl|11470
allec_ids 3.6.5.n1;
allgo_ids GO:0005886; GO:0005525; GO:0003924; GO:0043022; GO:0003746; GO:0045727;
allko_ids K03596;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669119.1 1 188 evalue:9.4e-86 qcov:96.90 identity:87.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00679; PF06421;
pfam_desc Elongation factor G C-terminus; GTP-binding protein LepA C-terminus;
pfam_id EFG_C; LepA_C;
pfam_target db:Pfam-A.hmm|PF00679.24 evalue:4.8e-19 score:67.4 best_domain_score:66.7 name:EFG_C; db:Pfam-A.hmm|PF06421.12 evalue:4.1e-50 score:167.7 best_domain_score:167.3 name:LepA_C;
sprot_desc Elongation factor 4;
sprot_id sp|Q47RQ0|LEPA_THEFY;
sprot_target db:uniprot_sprot|sp|Q47RQ0|LEPA_THEFY 1 190 evalue:1.2e-71 qcov:97.90 identity:68.40;
31180 29987 CDS
ID metaerg.pl|11471
allec_ids 3.6.5.n1; 3.6.5.-;
allgo_ids GO:0003924; GO:0005525; GO:0005886; GO:0043022; GO:0003746; GO:0045727;
allko_ids K00860; K00956; K00390; K13811; K03018; K00955; K00958; K03596;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669119.1 1 397 evalue:4.9e-190 qcov:100.00 identity:85.10;
kegg_pathway_id 00230; 03020; 00450; 00920;
kegg_pathway_name Purine metabolism; RNA polymerase; Selenoamino acid metabolism; Sulfur metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00009; PF01926;
pfam_desc Elongation factor Tu GTP binding domain; 50S ribosome-binding GTPase;
pfam_id GTP_EFTU; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00009.27 evalue:7.2e-53 score:178.3 best_domain_score:177.9 name:GTP_EFTU; db:Pfam-A.hmm|PF01926.23 evalue:7.1e-06 score:25.3 best_domain_score:24.7 name:MMR_HSR1;
sprot_desc Elongation factor 4;
sprot_id sp|Q47RQ0|LEPA_THEFY;
sprot_target db:uniprot_sprot|sp|Q47RQ0|LEPA_THEFY 8 385 evalue:2.4e-143 qcov:95.20 identity:66.40;
tigrfam_acc TIGR00231; TIGR01393;
tigrfam_desc small GTP-binding protein domain; elongation factor 4;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name small_GTP; lepA;
tigrfam_sub1role General; General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:4.1e-17 score:61.6 best_domain_score:61.1 name:TIGR00231; db:TIGRFAMs.hmm|TIGR01393 evalue:2e-171 score:570.5 best_domain_score:570.2 name:TIGR01393;
31597 32352 CDS
ID metaerg.pl|11472
allko_ids K01449; K01448; K01537; K09693; K01081; K01183;
kegg_pathway_id 00760; 00550; 02010; 00230; 00530; 00240;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Peptidoglycan biosynthesis; ABC transporters - General; Purine metabolism; Aminosugars metabolism; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF01476; PF06737;
pfam_desc LysM domain; Transglycosylase-like domain;
pfam_id LysM; Transglycosylas;
pfam_target db:Pfam-A.hmm|PF01476.20 evalue:2.2e-21 score:74.9 best_domain_score:49.2 name:LysM; db:Pfam-A.hmm|PF06737.14 evalue:2.6e-30 score:104.1 best_domain_score:104.1 name:Transglycosylas;
32652 32855 CDS
ID metaerg.pl|11473
allgo_ids GO:0003676; GO:0005737; GO:0003677;
allko_ids K03704;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669110.1 1 67 evalue:1.2e-24 qcov:100.00 identity:79.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00313; PF08206;
pfam_desc 'Cold-shock' DNA-binding domain; Ribonuclease B OB domain;
pfam_id CSD; OB_RNB;
pfam_target db:Pfam-A.hmm|PF00313.22 evalue:2.2e-31 score:106.8 best_domain_score:106.7 name:CSD; db:Pfam-A.hmm|PF08206.11 evalue:2.7e-05 score:23.0 best_domain_score:22.4 name:OB_RNB;
sprot_desc Cold shock protein CspA;
sprot_id sp|P0A9Y1|CSPA_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9Y1|CSPA_ECO57 4 67 evalue:1.3e-20 qcov:95.50 identity:70.30;
33416 33018 CDS
ID metaerg.pl|11474
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669085.1 1 132 evalue:6.5e-30 qcov:100.00 identity:55.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
33631 35214 CDS
ID metaerg.pl|11475
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__UBA9676;s__UBA9676 sp003541285;
genomedb_acc GCA_003541285.1;
genomedb_target db:genomedb|GCA_003541285.1|HCU95309.1 35 527 evalue:4.3e-101 qcov:93.50 identity:44.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
35211 35489 CDS
ID metaerg.pl|11476
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__UBA10347;g__UBA10347;s__UBA10347 sp003485885;
genomedb_acc GCA_003485885.1;
genomedb_target db:genomedb|GCA_003485885.1|HAY67639.1 1 92 evalue:4.5e-14 qcov:100.00 identity:53.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
35499 35732 CDS
ID metaerg.pl|11477
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__UBA9676;s__UBA9676 sp003541285;
genomedb_acc GCA_003541285.1;
genomedb_target db:genomedb|GCA_003541285.1|HCU95307.1 7 77 evalue:2.2e-14 qcov:92.20 identity:57.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
35837 36796 CDS
ID metaerg.pl|11478
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA4744;g__UBA4744;s__UBA4744 sp002403855;
genomedb_acc GCA_002403855.1;
genomedb_target db:genomedb|GCA_002403855.1|DHIO01000041.1_129 3 307 evalue:2.6e-85 qcov:95.60 identity:53.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00924;
pfam_desc Mechanosensitive ion channel;
pfam_id MS_channel;
pfam_target db:Pfam-A.hmm|PF00924.18 evalue:1.9e-24 score:85.6 best_domain_score:84.3 name:MS_channel;
sprot_desc Uncharacterized MscS family protein MJ0700;
sprot_id sp|Q58111|Y700_METJA;
sprot_target db:uniprot_sprot|sp|Q58111|Y700_METJA 5 283 evalue:2.0e-15 qcov:87.50 identity:24.60;
tm_num 3;
35837 36796 transmembrane_helix
ID metaerg.pl|11479
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology o35879-35944i36005-36064o36092-36160i;
36865 37227 CDS
ID metaerg.pl|11480
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
tm_num 2;
36865 37227 transmembrane_helix
ID metaerg.pl|11481
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology o36955-37023i37057-37125o;
37469 37729 CDS
ID metaerg.pl|11482
allgo_ids GO:0003723; GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02968;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668969.1 1 86 evalue:4.1e-17 qcov:100.00 identity:64.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF01649;
pfam_desc Ribosomal protein S20;
pfam_id Ribosomal_S20p;
pfam_target db:Pfam-A.hmm|PF01649.18 evalue:2.1e-25 score:88.4 best_domain_score:88.3 name:Ribosomal_S20p;
sprot_desc 30S ribosomal protein S20;
sprot_id sp|Q47RQ2|RS20_THEFY;
sprot_target db:uniprot_sprot|sp|Q47RQ2|RS20_THEFY 1 86 evalue:8.3e-17 qcov:100.00 identity:60.50;
tigrfam_acc TIGR00029;
tigrfam_desc ribosomal protein bS20;
tigrfam_mainrole Protein synthesis;
tigrfam_name S20;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00029 evalue:4.9e-22 score:77.4 best_domain_score:77.3 name:TIGR00029;
37823 42637 CDS
ID metaerg.pl|11483
allec_ids 1.4.1.2;
allgo_ids GO:0004352; GO:0019551;
allko_ids K15371;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442010.1 2 1573 evalue:0.0e+00 qcov:98.00 identity:48.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id PROPFERM-PWY; GLUTAMATE-DEG1-PWY;
metacyc_pathway_name L-alanine fermentation to propanoate and acetate;; L-glutamate degradation I;;
metacyc_pathway_type Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;; GLUTAMATE-DEG;;
pfam_acc PF05088; PF00208;
pfam_desc Bacterial NAD-glutamate dehydrogenase; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase;
pfam_id Bac_GDH; ELFV_dehydrog;
pfam_target db:Pfam-A.hmm|PF05088.12 evalue:0 score:1395.7 best_domain_score:1394.3 name:Bac_GDH; db:Pfam-A.hmm|PF00208.21 evalue:1.2e-08 score:34.2 best_domain_score:31.2 name:ELFV_dehydrog;
sprot_desc NAD-specific glutamate dehydrogenase;
sprot_id sp|A0R1C2|DHE2_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R1C2|DHE2_MYCS2 74 1574 evalue:8.6e-232 qcov:93.60 identity:36.30;
43457 42672 CDS
ID metaerg.pl|11484
allko_ids K02341; K02340; K02343;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442009.1 1 261 evalue:7.6e-91 qcov:100.00 identity:68.20;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
46197 43423 CDS
ID metaerg.pl|11485
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442008.1 24 922 evalue:2.4e-211 qcov:97.30 identity:52.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF03772; PF00753; PF12706;
pfam_desc Competence protein; Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain;
pfam_id Competence; Lactamase_B; Lactamase_B_2;
pfam_target db:Pfam-A.hmm|PF03772.16 evalue:1.9e-41 score:141.4 best_domain_score:141.4 name:Competence; db:Pfam-A.hmm|PF00753.27 evalue:2.6e-13 score:49.6 best_domain_score:49.6 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:7.3e-12 score:44.5 best_domain_score:44.5 name:Lactamase_B_2;
tigrfam_acc TIGR00360;
tigrfam_desc ComEC/Rec2-related protein;
tigrfam_mainrole Unknown function;
tigrfam_name ComEC_N-term;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00360 evalue:1.4e-21 score:76.6 best_domain_score:75.7 name:TIGR00360;
tm_num 10;
46197 43423 transmembrane_helix
ID metaerg.pl|11486
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology o43555-43623i43636-43704o43732-43800i44293-44361o44566-44634i44671-44739o44767-44835i44848-44916o44926-44994i45013-45081o;
47183 46194 CDS
ID metaerg.pl|11487
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668962.1 30 328 evalue:2.4e-41 qcov:90.90 identity:47.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00633; PF12836; PF10531;
pfam_desc Helix-hairpin-helix motif; Helix-hairpin-helix motif; SLBB domain;
pfam_id HHH; HHH_3; SLBB;
pfam_target db:Pfam-A.hmm|PF00633.23 evalue:3.5e-09 score:35.3 best_domain_score:25.3 name:HHH; db:Pfam-A.hmm|PF12836.7 evalue:6.5e-19 score:67.2 best_domain_score:66.5 name:HHH_3; db:Pfam-A.hmm|PF10531.9 evalue:3.1e-14 score:51.8 best_domain_score:50.7 name:SLBB;
47771 47283 CDS
ID metaerg.pl|11488
allgo_ids GO:0008289;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668961.1 6 130 evalue:3.6e-38 qcov:77.20 identity:68.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF02645;
pfam_desc Uncharacterised protein, DegV family COG1307;
pfam_id DegV;
pfam_target db:Pfam-A.hmm|PF02645.16 evalue:7.6e-30 score:103.4 best_domain_score:103.2 name:DegV;
sprot_desc DegV domain-containing protein spr1415;
sprot_id sp|Q8DP17|Y1415_STRR6;
sprot_target db:uniprot_sprot|sp|Q8DP17|Y1415_STRR6 5 131 evalue:7.8e-16 qcov:78.40 identity:35.60;
tigrfam_acc TIGR00762;
tigrfam_desc EDD domain protein, DegV family;
tigrfam_mainrole Unknown function;
tigrfam_name DegV;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00762 evalue:1.1e-31 score:109.3 best_domain_score:109.1 name:TIGR00762;
47871 47787 tRNA
ID metaerg.pl|11489
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
name tRNA_Gln_ctg;
49247 48261 CDS
ID metaerg.pl|11490
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441522.1 1 323 evalue:7.7e-56 qcov:98.50 identity:46.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF03706;
pfam_desc Lysylphosphatidylglycerol synthase TM region;
pfam_id LPG_synthase_TM;
pfam_target db:Pfam-A.hmm|PF03706.13 evalue:1.3e-30 score:106.3 best_domain_score:106.1 name:LPG_synthase_TM;
sp YES;
tigrfam_acc TIGR00374;
tigrfam_desc TIGR00374 family protein;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00374;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00374 evalue:1.5e-17 score:63.2 best_domain_score:62.4 name:TIGR00374;
tm_num 8;
48261 48323 signal_peptide
ID metaerg.pl|11491
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
49247 48261 transmembrane_helix
ID metaerg.pl|11492
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology i48264-48323o48351-48419i48480-48548o48591-48659i48693-48761o48903-48971i48990-49058o49071-49139i;
51850 49307 CDS
ID metaerg.pl|11493
allec_ids 6.1.1.4;
allgo_ids GO:0004812; GO:0006418; GO:0005737; GO:0002161; GO:0005524; GO:0004823; GO:0006429;
allko_ids K01869;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442007.1 4 845 evalue:0.0e+00 qcov:99.40 identity:70.20;
kegg_pathway_id 00970; 00290;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Valine, leucine and isoleucine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF08264; PF00133; PF09334; PF13603;
pfam_desc Anticodon-binding domain of tRNA; tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Leucyl-tRNA synthetase, Domain 2;
pfam_id Anticodon_1; tRNA-synt_1; tRNA-synt_1g; tRNA-synt_1_2;
pfam_target db:Pfam-A.hmm|PF08264.13 evalue:6.3e-18 score:64.4 best_domain_score:63.6 name:Anticodon_1; db:Pfam-A.hmm|PF00133.22 evalue:7e-60 score:202.1 best_domain_score:135.7 name:tRNA-synt_1; db:Pfam-A.hmm|PF09334.11 evalue:1.1e-23 score:82.9 best_domain_score:50.8 name:tRNA-synt_1g; db:Pfam-A.hmm|PF13603.6 evalue:9.7e-55 score:184.2 best_domain_score:183.6 name:tRNA-synt_1_2;
sprot_desc Leucine--tRNA ligase;
sprot_id sp|A5D416|SYL_PELTS;
sprot_target db:uniprot_sprot|sp|A5D416|SYL_PELTS 24 845 evalue:2.7e-221 qcov:97.00 identity:48.60;
tigrfam_acc TIGR00396;
tigrfam_desc leucine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name leuS_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00396 evalue:4.9e-267 score:887.5 best_domain_score:877.7 name:TIGR00396;
52070 51995 tRNA
ID metaerg.pl|11494
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
name tRNA_Ala_ggc;
52165 53304 CDS
ID metaerg.pl|11495
allec_ids 2.7.11.1;
allgo_ids GO:0004672; GO:0005524; GO:0006468; GO:0004674;
allko_ids K04372; K04443; K08847; K01728; K04367; K13986; K02178; K08841; K07675; K13414; K02486; K08853; K12767; K04688; K05688; K05121; K13304; K13303; K08805; K04420; K04421; K04425; K08286; K08850; K01768; K05112; K08809; K08792; K04373; K05098; K05096; K05097; K05091; K02482; K02480; K04445; K11228; K08790; K08854; K11912; K08897; K11889; K08848; K05744; K08846; K04444; K05105; K08855; K05103; K05102; K08333; K08282; K08856; K04426; K07673; K11265; K02831; K13302; K00924; K04424; K05743; K07682; K03407; K05111; K11623; K04442; K07683; K07778; K08884; K05113; K08810; K12132;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW11611.1 5 316 evalue:2.3e-59 qcov:82.30 identity:44.40;
kegg_pathway_id 00230; 04510; 04360; 04111; 04640; 04530; 04140; 04110; 05012; 00040; 04150; 02020; 04011; 04010; 05014;
kegg_pathway_name Purine metabolism; Focal adhesion; Axon guidance; Cell cycle - yeast; Hematopoietic cell lineage; Tight junction; Regulation of autophagy; Cell cycle; Parkinson's disease; Pentose and glucuronate interconversions; mTOR signaling pathway; Two-component system - General; MAPK signaling pathway - yeast; MAPK signaling pathway; Amyotrophic lateral sclerosis (ALS);
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00069; PF07714;
pfam_desc Protein kinase domain; Protein tyrosine kinase;
pfam_id Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF00069.25 evalue:2.1e-45 score:154.4 best_domain_score:154.1 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:1.1e-28 score:99.5 best_domain_score:99.2 name:Pkinase_Tyr;
sprot_desc Probable serine/threonine-protein kinase CE0033;
sprot_id sp|Q8FUI5|PKN1_COREF;
sprot_target db:uniprot_sprot|sp|Q8FUI5|PKN1_COREF 1 275 evalue:2.2e-53 qcov:72.60 identity:44.90;
tm_num 1;
52165 53304 transmembrane_helix
ID metaerg.pl|11496
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology i53200-53259o;
53411 54424 CDS
ID metaerg.pl|11497
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668946.1 2 333 evalue:1.4e-73 qcov:98.50 identity:49.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF01593; PF00890; PF13450; PF00070;
pfam_desc Flavin containing amine oxidoreductase; FAD binding domain; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; FAD_binding_2; NAD_binding_8; Pyr_redox;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:4.1e-14 score:52.0 best_domain_score:30.6 name:Amino_oxidase; db:Pfam-A.hmm|PF00890.24 evalue:1.2e-06 score:27.1 best_domain_score:26.3 name:FAD_binding_2; db:Pfam-A.hmm|PF13450.6 evalue:3.8e-14 score:51.9 best_domain_score:51.9 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:5.5e-05 score:22.9 best_domain_score:21.6 name:Pyr_redox;
sp YES;
53411 53458 signal_peptide
ID metaerg.pl|11498
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
55283 54558 CDS
ID metaerg.pl|11499
allec_ids 3.1.3.85;
allgo_ids GO:0016787;
allko_ids K01103; K00560; K01834; K02226; K01837; K15640; K01842; K15634; K22306;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668944.1 1 218 evalue:1.6e-66 qcov:90.50 identity:62.80;
kegg_pathway_id 00670; 00240; 00051; 00010; 00860;
kegg_pathway_name One carbon pool by folate; Pyrimidine metabolism; Fructose and mannose metabolism; Glycolysis / Gluconeogenesis; Porphyrin and chlorophyll metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00300;
pfam_desc Histidine phosphatase superfamily (branch 1);
pfam_id His_Phos_1;
pfam_target db:Pfam-A.hmm|PF00300.22 evalue:6.1e-46 score:155.8 best_domain_score:155.8 name:His_Phos_1;
sprot_desc Glucosyl-3-phosphoglycerate phosphatase;
sprot_id sp|A1TC01|GPGP_MYCVP;
sprot_target db:uniprot_sprot|sp|A1TC01|GPGP_MYCVP 1 210 evalue:6.8e-08 qcov:87.10 identity:27.90;
55705 55280 CDS
ID metaerg.pl|11500
allgo_ids GO:0005737; GO:0042256; GO:0090071; GO:0017148;
allko_ids K09710;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442005.1 1 119 evalue:3.3e-40 qcov:84.40 identity:78.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF02410;
pfam_desc Ribosomal silencing factor during starvation;
pfam_id RsfS;
pfam_target db:Pfam-A.hmm|PF02410.15 evalue:7e-23 score:80.2 best_domain_score:79.7 name:RsfS;
sprot_desc Ribosomal silencing factor RsfS;
sprot_id sp|Q97P97|IOJAP_STRPN;
sprot_target db:uniprot_sprot|sp|Q97P97|IOJAP_STRPN 9 116 evalue:1.1e-13 qcov:76.60 identity:39.80;
tigrfam_acc TIGR00090;
tigrfam_desc ribosome silencing factor;
tigrfam_mainrole Protein synthesis;
tigrfam_name rsfS_iojap_ybeB;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00090 evalue:2.7e-28 score:97.2 best_domain_score:96.8 name:TIGR00090;
56431 55787 CDS
ID metaerg.pl|11501
allec_ids 2.7.7.18;
allgo_ids GO:0003824; GO:0009058; GO:0005524; GO:0004515; GO:0009435;
allko_ids K00969;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668942.1 15 209 evalue:2.0e-68 qcov:91.10 identity:69.40;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id PWY-5653; PWY0-781; NADSYN-PWY; PWY-3502; PYRIDNUCSYN-PWY; PWY-5381;
metacyc_pathway_name NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde;; aspartate superpathway;; NAD de novo biosynthesis II (from tryptophan);; superpathway of NAD biosynthesis in eukaryotes;; NAD de novo biosynthesis I (from aspartate);; pyridine nucleotide cycling (plants);;
metacyc_pathway_type NAD-SYN;; Super-Pathways;; NAD-SYN; Super-Pathways;; NAD-SYN; Super-Pathways;; NAD-SYN;; NAD-Metabolism;;
pfam_acc PF01467;
pfam_desc Cytidylyltransferase-like;
pfam_id CTP_transf_like;
pfam_target db:Pfam-A.hmm|PF01467.26 evalue:1.5e-21 score:76.3 best_domain_score:76.1 name:CTP_transf_like;
sprot_desc Probable nicotinate-nucleotide adenylyltransferase;
sprot_id sp|A4F9M5|NADD_SACEN;
sprot_target db:uniprot_sprot|sp|A4F9M5|NADD_SACEN 17 213 evalue:1.1e-36 qcov:92.10 identity:40.20;
tigrfam_acc TIGR00125; TIGR00482;
tigrfam_desc cytidyltransferase-like domain; nicotinate (nicotinamide) nucleotide adenylyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name cyt_tran_rel; TIGR00482;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00125 evalue:1.6e-08 score:33.8 best_domain_score:32.7 name:TIGR00125; db:TIGRFAMs.hmm|TIGR00482 evalue:1e-43 score:148.8 best_domain_score:148.6 name:TIGR00482;
57539 56448 CDS
ID metaerg.pl|11502
allec_ids 1.13.11.11;
allgo_ids GO:0004833; GO:0019441; GO:0020037; GO:0046872; GO:0051289;
allko_ids K00453;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442003.1 8 361 evalue:3.0e-125 qcov:97.50 identity:64.40;
kegg_pathway_id 00380;
kegg_pathway_name Tryptophan metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id PWY-3502; PWY-2504; NADSYN-PWY; PWY-6309; PWY-5651; TRYPTOPHAN-DEGRADATION-1; TRPCAT-PWY;
metacyc_pathway_name superpathway of NAD biosynthesis in eukaryotes;; superpathway of aromatic compound degradation via 3-oxoadipate;; NAD de novo biosynthesis II (from tryptophan);; L-tryptophan degradation XI (mammalian, via kynurenine);; L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde;; L-tryptophan degradation III (eukaryotic);; L-tryptophan degradation I (via anthranilate);;
metacyc_pathway_type NAD-SYN; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; NAD-SYN; Super-Pathways;; Super-Pathways; TRYPTOPHAN-DEG;; TRYPTOPHAN-DEG;; Super-Pathways; TRYPTOPHAN-DEG;; TRYPTOPHAN-DEG;;
pfam_acc PF03301;
pfam_desc Tryptophan 2,3-dioxygenase;
pfam_id Trp_dioxygenase;
pfam_target db:Pfam-A.hmm|PF03301.13 evalue:4.2e-95 score:318.2 best_domain_score:318.1 name:Trp_dioxygenase;
sprot_desc Tryptophan 2,3-dioxygenase;
sprot_id sp|Q6MM37|T23O_BDEBA;
sprot_target db:uniprot_sprot|sp|Q6MM37|T23O_BDEBA 6 361 evalue:2.1e-85 qcov:98.10 identity:45.20;
57848 59689 CDS
ID metaerg.pl|11503
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667678.1 153 611 evalue:3.5e-94 qcov:74.90 identity:47.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
61166 59748 CDS
ID metaerg.pl|11504
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668930.1 1 472 evalue:2.5e-209 qcov:100.00 identity:78.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF05762;
pfam_desc VWA domain containing CoxE-like protein;
pfam_id VWA_CoxE;
pfam_target db:Pfam-A.hmm|PF05762.14 evalue:1.3e-49 score:167.9 best_domain_score:166.5 name:VWA_CoxE;
62669 61224 CDS
ID metaerg.pl|11505
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668929.1 13 478 evalue:8.9e-45 qcov:96.90 identity:36.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
sp YES;
tm_num 1;
61224 61358 signal_peptide
ID metaerg.pl|11506
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
62669 61224 transmembrane_helix
ID metaerg.pl|11507
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology i61290-61358o;
63648 62716 CDS
ID metaerg.pl|11508
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668928.1 15 310 evalue:8.4e-137 qcov:95.50 identity:85.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00004; PF07724; PF13401; PF07726; PF07728; PF05496; PF00158;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); AAA domain; ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); Holliday junction DNA helicase RuvB P-loop domain; Sigma-54 interaction domain;
pfam_id AAA; AAA_2; AAA_22; AAA_3; AAA_5; RuvB_N; Sigma54_activat;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:7.4e-10 score:38.6 best_domain_score:35.3 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:3.8e-05 score:23.1 best_domain_score:22.4 name:AAA_2; db:Pfam-A.hmm|PF13401.6 evalue:3.9e-07 score:29.7 best_domain_score:28.3 name:AAA_22; db:Pfam-A.hmm|PF07726.11 evalue:3.8e-06 score:26.0 best_domain_score:12.5 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:5.6e-12 score:45.1 best_domain_score:41.6 name:AAA_5; db:Pfam-A.hmm|PF05496.12 evalue:4.4e-05 score:22.5 best_domain_score:11.0 name:RuvB_N; db:Pfam-A.hmm|PF00158.26 evalue:0.00022 score:20.2 best_domain_score:10.9 name:Sigma54_activat;
64673 63723 CDS
ID metaerg.pl|11509
allec_ids 3.5.1.-;
allgo_ids GO:0016811; GO:0019740; GO:0006212;
allko_ids K01259; K09023;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces megasporus;
genomedb_acc GCF_000718985.1;
genomedb_target db:genomedb|GCF_000718985.1|WP_051716834.1 34 303 evalue:1.1e-64 qcov:85.40 identity:53.90;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id PWY-5327; LYSDEGII-PWY; PWY-5784; PWY-6548; PWY-0; PWY-1822;
metacyc_pathway_name superpathway of L-lysine degradation;; L-lysine degradation III;; indole-3-acetate inactivation VIII;; ; putrescine degradation III;; indole-3-acetate activation I;;
metacyc_pathway_type LYSINE-DEG; Super-Pathways;; LYSINE-DEG;; Indole-3-Acetate-Inactivation;; ; Putrescine-Degradation;; Activation;;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:1.5e-22 score:79.7 best_domain_score:73.0 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:9.1e-15 score:55.1 best_domain_score:54.7 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:2.1e-16 score:59.2 best_domain_score:58.0 name:Hydrolase_4;
sprot_desc Putative aminoacrylate hydrolase RutD;
sprot_id sp|B7KWT4|RUTD_METC4;
sprot_target db:uniprot_sprot|sp|B7KWT4|RUTD_METC4 35 281 evalue:2.5e-10 qcov:78.20 identity:30.00;
64872 65840 CDS
ID metaerg.pl|11510
allec_ids 1.3.1.103;
allgo_ids GO:0055114; GO:0102523; GO:0016628; GO:0042206;
allko_ids K13953; K00001; K21839;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668925.1 1 322 evalue:3.2e-107 qcov:100.00 identity:64.20;
kegg_pathway_id 00350; 00120; 00071; 00624; 00010; 00641;
kegg_pathway_name Tyrosine metabolism; Bile acid biosynthesis; Fatty acid metabolism; 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis; 3-Chloroacrylic acid degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF08240; PF00107; PF13602;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N; ADH_zinc_N_2;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:4.2e-09 score:35.5 best_domain_score:34.5 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:1.9e-26 score:91.8 best_domain_score:91.2 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:5.6e-22 score:78.5 best_domain_score:76.9 name:ADH_zinc_N_2;
sprot_desc 2-haloacrylate reductase;
sprot_id sp|Q59I44|CAA43_BURSP;
sprot_target db:uniprot_sprot|sp|Q59I44|CAA43_BURSP 10 322 evalue:9.9e-55 qcov:97.20 identity:40.20;
65837 66337 CDS
ID metaerg.pl|11511
allgo_ids GO:0002161;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sediminis;
genomedb_acc GCF_003047295.1;
genomedb_target db:genomedb|GCF_003047295.1|WP_107772872.1 10 166 evalue:1.1e-39 qcov:94.60 identity:58.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF04073;
pfam_desc Aminoacyl-tRNA editing domain;
pfam_id tRNA_edit;
pfam_target db:Pfam-A.hmm|PF04073.15 evalue:1.2e-30 score:105.4 best_domain_score:105.0 name:tRNA_edit;
66488 67444 CDS
ID metaerg.pl|11512
allec_ids 1.6.5.5;
allgo_ids GO:0055114; GO:0005829; GO:0003730; GO:0050661; GO:0070402; GO:0003960; GO:0008270; GO:0051289; GO:0042178;
allko_ids K13953; K00001; K00344;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668921.1 1 317 evalue:3.3e-128 qcov:99.70 identity:74.10;
kegg_pathway_id 00624; 00010; 00641; 00350; 00071; 00120;
kegg_pathway_name 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis; 3-Chloroacrylic acid degradation; Tyrosine metabolism; Fatty acid metabolism; Bile acid biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00107; PF13602;
pfam_desc Zinc-binding dehydrogenase; Zinc-binding dehydrogenase;
pfam_id ADH_zinc_N; ADH_zinc_N_2;
pfam_target db:Pfam-A.hmm|PF00107.26 evalue:4.6e-31 score:106.7 best_domain_score:106.1 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:1.1e-21 score:77.5 best_domain_score:76.0 name:ADH_zinc_N_2;
sprot_desc Quinone oxidoreductase;
sprot_id sp|P47199|QOR_MOUSE;
sprot_target db:uniprot_sprot|sp|P47199|QOR_MOUSE 1 314 evalue:7.8e-36 qcov:98.70 identity:32.70;
67551 67907 CDS
ID metaerg.pl|11513
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
sp YES;
tm_num 1;
67551 67640 signal_peptide
ID metaerg.pl|11514
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
67551 67907 transmembrane_helix
ID metaerg.pl|11515
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology o67560-67628i;
67996 68703 CDS
ID metaerg.pl|11516
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665312.1 1 235 evalue:5.7e-53 qcov:100.00 identity:54.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF06240; PF10604;
pfam_desc Carbon monoxide dehydrogenase subunit G (CoxG); Polyketide cyclase / dehydrase and lipid transport;
pfam_id COXG; Polyketide_cyc2;
pfam_target db:Pfam-A.hmm|PF06240.13 evalue:8e-22 score:76.7 best_domain_score:76.4 name:COXG; db:Pfam-A.hmm|PF10604.9 evalue:8.2e-10 score:38.3 best_domain_score:37.8 name:Polyketide_cyc2;
tm_num 1;
67996 68703 transmembrane_helix
ID metaerg.pl|11517
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology o68638-68691i;
69841 68723 CDS
ID metaerg.pl|11518
allec_ids 2.7.2.11;
allgo_ids GO:0003723; GO:0005737; GO:0005524; GO:0004349; GO:0055129;
allko_ids K12524; K00928; K00003; K06969; K12525; K00931; K12657;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442324.1 1 372 evalue:9.7e-148 qcov:100.00 identity:75.10;
kegg_pathway_id 00220; 00300; 00260;
kegg_pathway_name Urea cycle and metabolism of amino groups; Lysine biosynthesis; Glycine, serine and threonine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id CITRULBIO-PWY; PROSYN-PWY; PWY-5004;
metacyc_pathway_name L-citrulline biosynthesis;; L-proline biosynthesis I;; superpathway of L-citrulline metabolism;;
metacyc_pathway_type Citrulline-Biosynthesis;; PROLINE-SYN;; Citrulline-Biosynthesis; Super-Pathways;;
pfam_acc PF00696; PF01472; PF17785;
pfam_desc Amino acid kinase family; PUA domain; PUA-like domain;
pfam_id AA_kinase; PUA; PUA_3;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:4.6e-39 score:133.7 best_domain_score:132.1 name:AA_kinase; db:Pfam-A.hmm|PF01472.20 evalue:1.5e-17 score:62.5 best_domain_score:60.3 name:PUA; db:Pfam-A.hmm|PF17785.1 evalue:1.8e-05 score:23.7 best_domain_score:22.2 name:PUA_3;
sprot_desc Glutamate 5-kinase;
sprot_id sp|A8M065|PROB_SALAI;
sprot_target db:uniprot_sprot|sp|A8M065|PROB_SALAI 1 370 evalue:7.4e-86 qcov:99.50 identity:49.90;
tigrfam_acc TIGR01027;
tigrfam_desc glutamate 5-kinase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name proB;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01027 evalue:5.5e-120 score:400.0 best_domain_score:399.8 name:TIGR01027;
71313 69838 CDS
ID metaerg.pl|11519
allec_ids 3.6.5.-;
allgo_ids GO:0000166; GO:0005737; GO:0005525; GO:0003924; GO:0000287; GO:0042254;
allko_ids K03979;
genomedb_OC d__Bacteria;p__Firmicutes_E;c__Thermaerobacteria;o__Thermaerobacterales;f__Thermaerobacteraceae;g__Thermaerobacter;s__Thermaerobacter subterraneus;
genomedb_acc GCF_000183545.2;
genomedb_target db:genomedb|GCF_000183545.2|WP_006902934.1 4 485 evalue:1.5e-108 qcov:98.20 identity:50.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF09269; PF02421; PF01018; PF01926;
pfam_desc Domain of unknown function (DUF1967); Ferrous iron transport protein B; GTP1/OBG; 50S ribosome-binding GTPase;
pfam_id DUF1967; FeoB_N; GTP1_OBG; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF09269.11 evalue:5.7e-22 score:76.7 best_domain_score:75.8 name:DUF1967; db:Pfam-A.hmm|PF02421.18 evalue:1.4e-06 score:27.1 best_domain_score:18.2 name:FeoB_N; db:Pfam-A.hmm|PF01018.22 evalue:1.1e-55 score:186.7 best_domain_score:185.9 name:GTP1_OBG; db:Pfam-A.hmm|PF01926.23 evalue:7.7e-20 score:70.3 best_domain_score:69.7 name:MMR_HSR1;
sprot_desc GTPase Obg;
sprot_id sp|A0LSX1|OBG_ACIC1;
sprot_target db:uniprot_sprot|sp|A0LSX1|OBG_ACIC1 5 445 evalue:4.8e-109 qcov:89.80 identity:49.80;
tigrfam_acc TIGR02729; TIGR03595;
tigrfam_desc Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension;
tigrfam_mainrole Protein synthesis;
tigrfam_name Obg_CgtA; Obg_CgtA_exten;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02729 evalue:1.1e-118 score:395.2 best_domain_score:394.9 name:TIGR02729; db:TIGRFAMs.hmm|TIGR03595 evalue:1.1e-22 score:78.8 best_domain_score:77.9 name:TIGR03595;
71689 71432 CDS
ID metaerg.pl|11520
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02899;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668917.1 1 85 evalue:1.7e-31 qcov:100.00 identity:83.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF01016;
pfam_desc Ribosomal L27 protein;
pfam_id Ribosomal_L27;
pfam_target db:Pfam-A.hmm|PF01016.19 evalue:3e-36 score:122.5 best_domain_score:122.4 name:Ribosomal_L27;
sprot_desc 50S ribosomal protein L27;
sprot_id sp|C1A1L6|RL27_RHOE4;
sprot_target db:uniprot_sprot|sp|C1A1L6|RL27_RHOE4 1 82 evalue:2.3e-27 qcov:96.50 identity:74.40;
tigrfam_acc TIGR00062;
tigrfam_desc ribosomal protein bL27;
tigrfam_mainrole Protein synthesis;
tigrfam_name L27;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00062 evalue:5.1e-37 score:125.0 best_domain_score:124.7 name:TIGR00062;
71994 71692 CDS
ID metaerg.pl|11521
allgo_ids GO:0005840; GO:0019843; GO:0003735; GO:0006412;
allko_ids K02888;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668916.1 1 100 evalue:8.6e-35 qcov:100.00 identity:76.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00829;
pfam_desc Ribosomal prokaryotic L21 protein;
pfam_id Ribosomal_L21p;
pfam_target db:Pfam-A.hmm|PF00829.21 evalue:1.8e-31 score:107.7 best_domain_score:107.5 name:Ribosomal_L21p;
sprot_desc 50S ribosomal protein L21;
sprot_id sp|A8M0Z1|RL21_SALAI;
sprot_target db:uniprot_sprot|sp|A8M0Z1|RL21_SALAI 1 100 evalue:6.1e-19 qcov:100.00 identity:48.00;
tigrfam_acc TIGR00061;
tigrfam_desc ribosomal protein bL21;
tigrfam_mainrole Protein synthesis;
tigrfam_name L21;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00061 evalue:3.3e-24 score:84.3 best_domain_score:84.2 name:TIGR00061;
74126 72291 CDS
ID metaerg.pl|11522
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887;
allko_ids K10111; K02045; K06861; K01996; K02006; K02052; K06147;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441995.1 1 610 evalue:5.5e-241 qcov:99.80 identity:75.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:5.4e-39 score:133.7 best_domain_score:133.4 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:5.5e-30 score:103.9 best_domain_score:103.2 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YfiC;
sprot_id sp|P54719|YFIC_BACSU;
sprot_target db:uniprot_sprot|sp|P54719|YFIC_BACSU 35 602 evalue:9.0e-65 qcov:93.00 identity:29.30;
tm_num 6;
74126 72291 transmembrane_helix
ID metaerg.pl|11523
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology i72396-72464o72522-72590i72753-72821o72831-72887i73071-73139o73167-73235i;
76063 74123 CDS
ID metaerg.pl|11524
allec_ids 7.5.2.6;
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887; GO:0034040;
allko_ids K02000; K02023; K02049; K01995; K10111; K02045; K11072; K02071; K06861; K01996; K02017; K02006; K02052; K11085;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442323.1 11 627 evalue:1.1e-236 qcov:95.50 identity:72.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:9.7e-33 score:113.2 best_domain_score:112.8 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:5.3e-34 score:116.9 best_domain_score:116.3 name:ABC_tran;
sprot_desc Lipid A export ATP-binding/permease protein MsbA;
sprot_id sp|Q87R16|MSBA_VIBPA;
sprot_target db:uniprot_sprot|sp|Q87R16|MSBA_VIBPA 114 621 evalue:3.6e-56 qcov:78.60 identity:30.70;
tm_num 5;
76063 74123 transmembrane_helix
ID metaerg.pl|11525
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
topology i74237-74305o74348-74416i74579-74647o74660-74719i74903-74971o;
78263 76137 CDS
ID metaerg.pl|11526
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus sp000702465;
genomedb_acc GCF_000702465.1;
genomedb_target db:genomedb|GCF_000702465.1|WP_029338535.1 22 694 evalue:5.2e-118 qcov:95.10 identity:40.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
pfam_acc PF00990;
pfam_desc Diguanylate cyclase, GGDEF domain;
pfam_id GGDEF;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:9.4e-42 score:141.7 best_domain_score:137.1 name:GGDEF;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:1.2e-37 score:128.3 best_domain_score:126.9 name:TIGR00254;
79778 78351 CDS
ID metaerg.pl|11527
allec_ids 3.1.26.12; 3.1.4.-;
allgo_ids GO:0003723; GO:0005737; GO:0046872; GO:0004540; GO:0006397; GO:0006364;
allko_ids K08300; K08301;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668913.1 1 473 evalue:8.4e-197 qcov:99.60 identity:78.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.609924; 91.3889; 0.425051; 0.329043; 90.0249;
metacyc_pathway_id PWY0-1479;
metacyc_pathway_name tRNA processing;;
metacyc_pathway_type Nucleic-Acid-Processing;;
pfam_acc PF10150;
pfam_desc Ribonuclease E/G family;
pfam_id RNase_E_G;
pfam_target db:Pfam-A.hmm|PF10150.9 evalue:9.3e-98 score:326.2 best_domain_score:200.6 name:RNase_E_G;
sprot_desc Ribonuclease E;
sprot_id sp|A0R152|RNE_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R152|RNE_MYCS2 1 472 evalue:2.1e-101 qcov:99.40 identity:44.90;
tigrfam_acc TIGR00757;
tigrfam_desc ribonuclease, Rne/Rng family;
tigrfam_mainrole Transcription;
tigrfam_name RNaseEG;
tigrfam_sub1role Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00757 evalue:7e-135 score:449.3 best_domain_score:226.3 name:TIGR00757;
>Feature NODE_87_length_79430_cov_22.248
2776 2 CDS
ID metaerg.pl|11528
allgo_ids GO:0016021; GO:0005576; GO:0005886;
allko_ids K09118;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000007.1_108 1 925 evalue:2.8e-220 qcov:100.00 identity:45.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF03699;
pfam_desc Uncharacterised protein family (UPF0182);
pfam_id UPF0182;
pfam_target db:Pfam-A.hmm|PF03699.13 evalue:9.7e-164 score:545.7 best_domain_score:545.4 name:UPF0182;
sprot_desc hypothetical protein;
sprot_id sp|Q74AM0|Y2333_GEOSL;
sprot_target db:uniprot_sprot|sp|Q74AM0|Y2333_GEOSL 15 850 evalue:1.9e-98 qcov:90.40 identity:30.80;
tm_num 7;
2776 2 transmembrane_helix
ID metaerg.pl|11529
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology i35-103o176-244i305-373o500-568i629-697o755-823i842-910o;
4157 2769 CDS
ID metaerg.pl|11530
allec_ids 5.4.2.2;
allgo_ids GO:0005975; GO:0016868; GO:0000287; GO:0004614; GO:0004615; GO:0042121; GO:0009298; GO:0009103; GO:0009405;
allko_ids K03431; K00966; K01835; K01842; K01840; K00963; K15778;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000001.1_203 5 462 evalue:2.9e-162 qcov:99.10 identity:62.20;
kegg_pathway_id 00521; 00500; 00030; 00010; 00520; 00052; 00040; 00530; 00051;
kegg_pathway_name Streptomycin biosynthesis; Starch and sucrose metabolism; Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Nucleotide sugars metabolism; Galactose metabolism; Pentose and glucuronate interconversions; Aminosugars metabolism; Fructose and mannose metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id GLYCOCAT-PWY; PWY-5767; PWY-5661; PWY-842; PWY-622; SUCSYN-PWY; PWY-5941; PWY-5940; PWY-621; PWY-3801; PWY-5384;
metacyc_pathway_name glycogen degradation I;; ; GDP-glucose biosynthesis;; starch degradation I;; starch biosynthesis;; sucrose biosynthesis I (from photosynthesis);; glycogen degradation II;; streptomycin biosynthesis;; sucrose degradation III (sucrose invertase);; sucrose degradation II (sucrose synthase);; sucrose degradation IV (sucrose phosphorylase);;
metacyc_pathway_type Glycan-Degradation; Glycogen-Degradation;; ; GDP-Sugar-Biosynthesis;; Glycan-Degradation; Starch-Degradation;; GLYCOGEN-BIOSYN;; Sucrose-Biosynthesis; Super-Pathways;; Glycan-Degradation; Glycogen-Degradation;; Antibiotic-Biosynthesis;; SUCROSE-DEG;; SUCROSE-DEG;; SUCROSE-DEG;;
pfam_acc PF02878; PF02879; PF02880; PF00408;
pfam_desc Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain;
pfam_id PGM_PMM_I; PGM_PMM_II; PGM_PMM_III; PGM_PMM_IV;
pfam_target db:Pfam-A.hmm|PF02878.16 evalue:2.9e-30 score:104.0 best_domain_score:103.3 name:PGM_PMM_I; db:Pfam-A.hmm|PF02879.16 evalue:3.8e-25 score:87.7 best_domain_score:86.8 name:PGM_PMM_II; db:Pfam-A.hmm|PF02880.16 evalue:5.4e-21 score:74.2 best_domain_score:73.3 name:PGM_PMM_III; db:Pfam-A.hmm|PF00408.20 evalue:5e-12 score:45.1 best_domain_score:44.1 name:PGM_PMM_IV;
sprot_desc Phosphomannomutase/phosphoglucomutase;
sprot_id sp|Q02E40|ALGC_PSEAB;
sprot_target db:uniprot_sprot|sp|Q02E40|ALGC_PSEAB 3 456 evalue:4.7e-106 qcov:98.30 identity:44.20;
5762 4263 CDS
ID metaerg.pl|11531
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
allko_ids K00343;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000192.1_11 1 496 evalue:1.9e-170 qcov:99.40 identity:62.50;
kegg_pathway_id 00190; 00130;
kegg_pathway_name Oxidative phosphorylation; Ubiquinone biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:9.1e-74 score:247.5 best_domain_score:247.5 name:Proton_antipo_M;
sprot_desc NADH-quinone oxidoreductase subunit N;
sprot_id sp|B3E9V6|NUON_GEOLS;
sprot_target db:uniprot_sprot|sp|B3E9V6|NUON_GEOLS 15 488 evalue:1.5e-105 qcov:95.00 identity:47.40;
tigrfam_acc TIGR01770;
tigrfam_desc proton-translocating NADH-quinone oxidoreductase, chain N;
tigrfam_mainrole Energy metabolism;
tigrfam_name NDH_I_N;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01770 evalue:5.1e-128 score:427.2 best_domain_score:427.0 name:TIGR01770;
tm_num 14;
5762 4263 transmembrane_helix
ID metaerg.pl|11532
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology o4299-4367i4404-4472o4515-4583i4602-4661o4671-4730i4767-4835o4878-4946i5007-5075o5103-5171i5190-5243o5271-5339i5400-5468o5505-5564i5649-5717o;
7550 5769 CDS
ID metaerg.pl|11533
allec_ids 7.1.1.-;
allgo_ids GO:0006120; GO:0055114; GO:0016021; GO:0005886; GO:0008137; GO:0048038;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000007.1_111 1 503 evalue:2.2e-202 qcov:84.80 identity:72.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF01059; PF00361;
pfam_desc NADH-ubiquinone oxidoreductase chain 4, amino terminus; Proton-conducting membrane transporter;
pfam_id Oxidored_q5_N; Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF01059.17 evalue:2.6e-07 score:30.0 best_domain_score:30.0 name:Oxidored_q5_N; db:Pfam-A.hmm|PF00361.20 evalue:3.3e-73 score:245.7 best_domain_score:245.7 name:Proton_antipo_M;
sprot_desc NADH-quinone oxidoreductase subunit M;
sprot_id sp|P50974|NUOM_RHOCA;
sprot_target db:uniprot_sprot|sp|P50974|NUOM_RHOCA 14 497 evalue:2.9e-108 qcov:81.60 identity:45.80;
tigrfam_acc TIGR01972;
tigrfam_desc proton-translocating NADH-quinone oxidoreductase, chain M;
tigrfam_mainrole Energy metabolism;
tigrfam_name NDH_I_M;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01972 evalue:1.7e-175 score:583.5 best_domain_score:583.3 name:TIGR01972;
tm_num 14;
7550 5769 transmembrane_helix
ID metaerg.pl|11534
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology o5805-5867i5886-5954o6018-6086i6120-6173o6183-6251i6288-6356o6423-6491i6525-6593o6621-6689i6708-6776o6789-6857i6894-6962o7020-7088i7146-7214o;
9744 7561 CDS
ID metaerg.pl|11535
allec_ids 7.1.1.-; 1.6.-.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
allko_ids K00341;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000005.1_108 9 722 evalue:2.0e-266 qcov:98.20 identity:65.00;
kegg_pathway_id 00190; 00130;
kegg_pathway_name Oxidative phosphorylation; Ubiquinone biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00361; PF00662;
pfam_desc Proton-conducting membrane transporter; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus;
pfam_id Proton_antipo_M; Proton_antipo_N;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:5.5e-81 score:271.2 best_domain_score:271.2 name:Proton_antipo_M; db:Pfam-A.hmm|PF00662.20 evalue:7.5e-25 score:86.0 best_domain_score:86.0 name:Proton_antipo_N;
sprot_desc NADH-quinone oxidoreductase subunit L;
sprot_id sp|P9WIW0|NUOL_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WIW0|NUOL_MYCTO 91 726 evalue:2.5e-114 qcov:87.50 identity:42.70;
tigrfam_acc TIGR01974;
tigrfam_desc proton-translocating NADH-quinone oxidoreductase, chain L;
tigrfam_mainrole Energy metabolism;
tigrfam_name NDH_I_L;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01974 evalue:2.7e-208 score:693.0 best_domain_score:693.0 name:TIGR01974;
tm_num 16;
9744 7561 transmembrane_helix
ID metaerg.pl|11536
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology o7633-7701i7816-7884o7987-8055i8074-8133o8143-8211i8248-8316o8353-8421i8440-8508o8551-8619i8656-8724o8767-8826i8887-8955o8998-9066i9145-9213o9367-9435i9679-9738o;
10042 9749 CDS
ID metaerg.pl|11537
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0050136; GO:0048038; GO:0042773;
allko_ids K00340;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000079.1_32 1 97 evalue:4.2e-34 qcov:100.00 identity:87.60;
kegg_pathway_id 00190; 00130;
kegg_pathway_name Oxidative phosphorylation; Ubiquinone biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00420;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
pfam_id Oxidored_q2;
pfam_target db:Pfam-A.hmm|PF00420.24 evalue:2.2e-24 score:84.3 best_domain_score:83.9 name:Oxidored_q2;
sprot_desc NADH-quinone oxidoreductase subunit K 2;
sprot_id sp|A5G9A9|NUOK2_GEOUR;
sprot_target db:uniprot_sprot|sp|A5G9A9|NUOK2_GEOUR 6 97 evalue:1.0e-26 qcov:94.80 identity:66.70;
tm_num 3;
10042 9749 transmembrane_helix
ID metaerg.pl|11538
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology o9761-9814i9827-9895o9923-9991i;
10570 10046 CDS
ID metaerg.pl|11539
allec_ids 7.1.1.-;
allgo_ids GO:0008137; GO:0055114; GO:0016021; GO:0048038;
allko_ids K05578;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000007.1_114 4 174 evalue:3.3e-50 qcov:98.30 identity:67.30;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00499;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 6;
pfam_id Oxidored_q3;
pfam_target db:Pfam-A.hmm|PF00499.20 evalue:1.6e-35 score:121.2 best_domain_score:120.8 name:Oxidored_q3;
sprot_desc NAD(P)H-quinone oxidoreductase chain 6;
sprot_id sp|Q8Z075|NU6C_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8Z075|NU6C_NOSS1 4 172 evalue:3.0e-13 qcov:97.10 identity:36.10;
tm_num 5;
10570 10046 transmembrane_helix
ID metaerg.pl|11540
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology o10055-10114i10133-10201o10211-10279i10298-10366o10487-10555i;
11083 10583 CDS
ID metaerg.pl|11541
allec_ids 7.1.1.-;
allgo_ids GO:0005886; GO:0051539; GO:0005506; GO:0050136; GO:0048038;
allko_ids K00123; K00246; K00240; K00266; K00532; K00443; K03390; K00380; K00122; K11260; K04014; K00204; K00337; K00873; K00235; K00245; K03941; K00171; K00441; K00336; K00205; K00226; K00335; K00125; K00207; K03388; K00176; K05588; K08264; K00390; K08349; K00265; K00338; K00533; K00124; K05580; K00172; K11181;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000001.1_197 1 166 evalue:4.0e-85 qcov:100.00 identity:86.10;
kegg_pathway_id 00620; 05012; 00630; 00790; 00650; 00640; 00983; 00720; 00632; 00240; 00251; 00633; 00910; 02020; 00130; 00410; 00190; 00680; 00710; 00010; 00920; 00770; 00020; 00230;
kegg_pathway_name Pyruvate metabolism; Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Folate biosynthesis; Butanoate metabolism; Propanoate metabolism; Drug metabolism - other enzymes; Reductive carboxylate cycle (CO2 fixation); Benzoate degradation via CoA ligation; Pyrimidine metabolism; Glutamate metabolism; Trinitrotoluene degradation; Nitrogen metabolism; Two-component system - General; Ubiquinone biosynthesis; beta-Alanine metabolism; Oxidative phosphorylation; Methane metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Sulfur metabolism; Pantothenate and CoA biosynthesis; Citrate cycle (TCA cycle); Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00037; PF13237; PF13534; PF12797; PF14697; PF12838; PF13183; PF13187;
pfam_desc 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id Fer4; Fer4_10; Fer4_17; Fer4_2; Fer4_21; Fer4_7; Fer4_8; Fer4_9;
pfam_target db:Pfam-A.hmm|PF00037.27 evalue:6e-11 score:40.9 best_domain_score:34.5 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:9.1e-09 score:34.6 best_domain_score:23.2 name:Fer4_10; db:Pfam-A.hmm|PF13534.6 evalue:5.9e-06 score:26.0 best_domain_score:15.6 name:Fer4_17; db:Pfam-A.hmm|PF12797.7 evalue:5.8e-06 score:25.3 best_domain_score:15.4 name:Fer4_2; db:Pfam-A.hmm|PF14697.6 evalue:6.3e-09 score:35.1 best_domain_score:21.2 name:Fer4_21; db:Pfam-A.hmm|PF12838.7 evalue:1.3e-10 score:40.9 best_domain_score:40.1 name:Fer4_7; db:Pfam-A.hmm|PF13183.6 evalue:2.3e-08 score:33.6 best_domain_score:19.3 name:Fer4_8; db:Pfam-A.hmm|PF13187.6 evalue:4.8e-07 score:29.1 best_domain_score:27.2 name:Fer4_9;
sprot_desc NADH-quinone oxidoreductase subunit I;
sprot_id sp|Q1QST9|NUOI_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QST9|NUOI_CHRSD 21 148 evalue:2.9e-18 qcov:77.10 identity:53.10;
tigrfam_acc TIGR01971;
tigrfam_desc NADH-quinone oxidoreductase, chain I;
tigrfam_mainrole Energy metabolism;
tigrfam_name NuoI;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01971 evalue:9.3e-44 score:147.1 best_domain_score:146.8 name:TIGR01971;
12434 11121 CDS
ID metaerg.pl|11542
allec_ids 7.1.1.-;
allgo_ids GO:0016020; GO:0055114; GO:0016021; GO:0005886; GO:0016655; GO:0048038;
allko_ids K00337;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000005.1_104 1 415 evalue:3.9e-156 qcov:95.00 identity:67.30;
kegg_pathway_id 00130; 00190;
kegg_pathway_name Ubiquinone biosynthesis; Oxidative phosphorylation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00146;
pfam_desc NADH dehydrogenase;
pfam_id NADHdh;
pfam_target db:Pfam-A.hmm|PF00146.21 evalue:1.6e-122 score:407.7 best_domain_score:407.4 name:NADHdh;
sprot_desc NADH-quinone oxidoreductase subunit H 1;
sprot_id sp|Q11VB9|NUOH1_CYTH3;
sprot_target db:uniprot_sprot|sp|Q11VB9|NUOH1_CYTH3 6 365 evalue:1.9e-85 qcov:82.40 identity:46.40;
tm_num 9;
12434 11121 transmembrane_helix
ID metaerg.pl|11543
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology o11148-11216i11361-11429o11487-11555i11616-11684o11697-11765i11874-11942o12036-12104i12141-12209o12237-12305i;
14136 12487 CDS
ID metaerg.pl|11544
allgo_ids GO:0009055; GO:0051536;
allko_ids K00122; K03934; K05299; K00532; K00123; K00369; K00436; K05588; K00176; K03388; K08348; K00390; K00336; K02567; K00205; K00372;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC05074.1 5 548 evalue:9.4e-200 qcov:99.10 identity:64.20;
kegg_pathway_id 05012; 00630; 00130; 00190; 00790; 00680; 00910; 02020; 00020; 00720; 00920;
kegg_pathway_name Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Ubiquinone biosynthesis; Oxidative phosphorylation; Folate biosynthesis; Methane metabolism; Nitrogen metabolism; Two-component system - General; Citrate cycle (TCA cycle); Reductive carboxylate cycle (CO2 fixation); Sulfur metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00111; PF13510; PF00384; PF04879; PF10588;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region;
pfam_id Fer2; Fer2_4; Molybdopterin; Molybdop_Fe4S4; NADH-G_4Fe-4S_3;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:1.7e-08 score:33.5 best_domain_score:33.5 name:Fer2; db:Pfam-A.hmm|PF13510.6 evalue:3.4e-21 score:74.3 best_domain_score:73.2 name:Fer2_4; db:Pfam-A.hmm|PF00384.22 evalue:8.2e-06 score:24.3 best_domain_score:21.5 name:Molybdopterin; db:Pfam-A.hmm|PF04879.16 evalue:1.1e-10 score:40.5 best_domain_score:38.5 name:Molybdop_Fe4S4; db:Pfam-A.hmm|PF10588.9 evalue:2.3e-16 score:58.3 best_domain_score:58.3 name:NADH-G_4Fe-4S_3;
15539 14247 CDS
ID metaerg.pl|11545
allec_ids 7.1.1.-; 1.6.99.5;
allgo_ids GO:0051539; GO:0010181; GO:0046872; GO:0051287; GO:0008137; GO:0048038;
allko_ids K03943; K05586; K00356; K00122; K00329; K00335; K03942; K00334; K05587; K00124; K00436;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000192.1_3 1 430 evalue:2.3e-201 qcov:100.00 identity:76.50;
kegg_pathway_id 00130; 05012; 00630; 00190; 00680;
kegg_pathway_name Ubiquinone biosynthesis; Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Oxidative phosphorylation; Methane metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF01512; PF10589; PF10531;
pfam_desc Respiratory-chain NADH dehydrogenase 51 Kd subunit; NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; SLBB domain;
pfam_id Complex1_51K; NADH_4Fe-4S; SLBB;
pfam_target db:Pfam-A.hmm|PF01512.17 evalue:7.7e-54 score:180.9 best_domain_score:176.1 name:Complex1_51K; db:Pfam-A.hmm|PF10589.9 evalue:4e-33 score:112.6 best_domain_score:111.4 name:NADH_4Fe-4S; db:Pfam-A.hmm|PF10531.9 evalue:9.7e-13 score:47.0 best_domain_score:46.1 name:SLBB;
sprot_desc NADH-quinone oxidoreductase subunit F;
sprot_id sp|P65568|NUOF_MYCBO;
sprot_target db:uniprot_sprot|sp|P65568|NUOF_MYCBO 13 424 evalue:7.3e-130 qcov:95.80 identity:55.10;
tigrfam_acc TIGR01959;
tigrfam_desc NADH oxidoreductase (quinone), F subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name nuoF_fam;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01959 evalue:1.6e-188 score:625.4 best_domain_score:625.2 name:TIGR01959;
16213 15539 CDS
ID metaerg.pl|11546
allec_ids 1.6.99.3;
allgo_ids GO:0005747; GO:0005739; GO:0051537; GO:0046872; GO:0008137; GO:0048738; GO:0006120; GO:0007399;
allko_ids K00436; K05587; K00335; K03942; K00334; K00329; K05586; K00356; K03943;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000007.1_119 8 224 evalue:9.5e-90 qcov:96.90 identity:76.30;
kegg_pathway_id 00130; 05012; 00630; 00190; 00680;
kegg_pathway_name Ubiquinone biosynthesis; Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Oxidative phosphorylation; Methane metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF01257;
pfam_desc Thioredoxin-like [2Fe-2S] ferredoxin;
pfam_id 2Fe-2S_thioredx;
pfam_target db:Pfam-A.hmm|PF01257.19 evalue:2.3e-47 score:159.7 best_domain_score:159.5 name:2Fe-2S_thioredx;
sprot_desc NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial;
sprot_id sp|P04394|NDUV2_BOVIN;
sprot_target db:uniprot_sprot|sp|P04394|NDUV2_BOVIN 60 220 evalue:7.7e-30 qcov:71.90 identity:42.10;
tigrfam_acc TIGR01958;
tigrfam_desc NADH-quinone oxidoreductase, E subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name nuoE_fam;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01958 evalue:5.7e-43 score:145.7 best_domain_score:145.5 name:TIGR01958;
17487 16210 CDS
ID metaerg.pl|11547
allec_ids 7.1.1.-; 1.6.99.5;
allgo_ids GO:0016651; GO:0048038; GO:0051287; GO:0055114; GO:0005886; GO:0050136;
allko_ids K03935; K00333; K13380; K00329; K13378; K05579;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000001.1_192 1 425 evalue:8.3e-196 qcov:100.00 identity:76.90;
kegg_pathway_id 00190; 00130; 05012;
kegg_pathway_name Oxidative phosphorylation; Ubiquinone biosynthesis; Parkinson's disease;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00346;
pfam_desc Respiratory-chain NADH dehydrogenase, 49 Kd subunit;
pfam_id Complex1_49kDa;
pfam_target db:Pfam-A.hmm|PF00346.19 evalue:1.2e-113 score:377.9 best_domain_score:377.7 name:Complex1_49kDa;
sprot_desc NADH-quinone oxidoreductase subunit D;
sprot_id sp|B3DXN7|NUOD_METI4;
sprot_target db:uniprot_sprot|sp|B3DXN7|NUOD_METI4 38 425 evalue:2.9e-126 qcov:91.30 identity:55.20;
tigrfam_acc TIGR01962;
tigrfam_desc NADH dehydrogenase (quinone), D subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name NuoD;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01962 evalue:2.7e-162 score:539.2 best_domain_score:539.0 name:TIGR01962;
18263 17538 CDS
ID metaerg.pl|11548
allgo_ids GO:0008137; GO:0055114;
allko_ids K13378; K13380; K00332; K05581;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91404.1 13 209 evalue:4.3e-72 qcov:81.70 identity:66.70;
kegg_pathway_id 00130; 00190;
kegg_pathway_name Ubiquinone biosynthesis; Oxidative phosphorylation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00329;
pfam_desc Respiratory-chain NADH dehydrogenase, 30 Kd subunit;
pfam_id Complex1_30kDa;
pfam_target db:Pfam-A.hmm|PF00329.19 evalue:7.2e-42 score:142.1 best_domain_score:141.7 name:Complex1_30kDa;
tigrfam_acc TIGR01961;
tigrfam_desc NADH (or F420H2) dehydrogenase, subunit C;
tigrfam_mainrole Energy metabolism;
tigrfam_name NuoC_fam;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01961 evalue:1.4e-37 score:128.1 best_domain_score:127.8 name:TIGR01961;
19008 18286 CDS
ID metaerg.pl|11549
allgo_ids GO:0051536; GO:0055114;
allko_ids K13380; K05582; K00331;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000007.1_122 30 240 evalue:6.1e-95 qcov:87.90 identity:82.90;
kegg_pathway_id 00190; 00130;
kegg_pathway_name Oxidative phosphorylation; Ubiquinone biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF01058;
pfam_desc NADH ubiquinone oxidoreductase, 20 Kd subunit;
pfam_id Oxidored_q6;
pfam_target db:Pfam-A.hmm|PF01058.22 evalue:3.2e-22 score:78.0 best_domain_score:77.4 name:Oxidored_q6;
tigrfam_acc TIGR01957;
tigrfam_desc NADH-quinone oxidoreductase, B subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name nuoB_fam;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01957 evalue:7.4e-68 score:226.2 best_domain_score:225.8 name:TIGR01957;
19361 19005 CDS
ID metaerg.pl|11550
allec_ids 7.1.1.-;
allgo_ids GO:0008137; GO:0055114; GO:0016021; GO:0005886; GO:0048038;
allko_ids K00330;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000141.1_4 1 118 evalue:1.2e-48 qcov:100.00 identity:80.50;
kegg_pathway_id 00190; 00130;
kegg_pathway_name Oxidative phosphorylation; Ubiquinone biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00507;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
pfam_id Oxidored_q4;
pfam_target db:Pfam-A.hmm|PF00507.19 evalue:5.6e-37 score:125.1 best_domain_score:124.7 name:Oxidored_q4;
sp YES;
sprot_desc NADH-quinone oxidoreductase subunit A 2;
sprot_id sp|B5EFG3|NUOA2_GEOBB;
sprot_target db:uniprot_sprot|sp|B5EFG3|NUOA2_GEOBB 1 118 evalue:9.3e-27 qcov:100.00 identity:46.60;
tm_num 3;
19005 19079 signal_peptide
ID metaerg.pl|11551
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
19361 19005 transmembrane_helix
ID metaerg.pl|11552
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology o19014-19082i19182-19250o19260-19328i;
19763 20284 CDS
ID metaerg.pl|11553
allec_ids 3.5.4.13;
allgo_ids GO:0008829; GO:0000166; GO:0006226; GO:0006229;
allko_ids K01494;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000001.1_188 1 173 evalue:1.8e-80 qcov:100.00 identity:82.70;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PWY-6545; PWY0-166;
metacyc_pathway_name pyrimidine deoxyribonucleotides de novo biosynthesis III;; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);;
metacyc_pathway_type Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF00692;
pfam_desc dUTPase;
pfam_id dUTPase;
pfam_target db:Pfam-A.hmm|PF00692.19 evalue:7.8e-07 score:28.1 best_domain_score:25.9 name:dUTPase;
sprot_desc dCTP deaminase;
sprot_id sp|A9B2B7|DCD_HERA2;
sprot_target db:uniprot_sprot|sp|A9B2B7|DCD_HERA2 1 173 evalue:1.5e-73 qcov:100.00 identity:71.10;
tigrfam_acc TIGR02274;
tigrfam_desc deoxycytidine triphosphate deaminase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name dCTP_deam;
tigrfam_sub1role 2'-Deoxyribonucleotide metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR02274 evalue:1.7e-47 score:160.6 best_domain_score:160.4 name:TIGR02274;
20861 20370 CDS
ID metaerg.pl|11554
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00254;
pfam_desc FKBP-type peptidyl-prolyl cis-trans isomerase;
pfam_id FKBP_C;
pfam_target db:Pfam-A.hmm|PF00254.28 evalue:1.4e-25 score:88.6 best_domain_score:88.3 name:FKBP_C;
sp YES;
20370 20432 lipoprotein_signal_peptide
ID metaerg.pl|11555
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
22671 20866 CDS
ID metaerg.pl|11556
allec_ids 3.5.-.-;
allgo_ids GO:0016787; GO:0016810;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-320;s__SZUA-320 sp003246755;
genomedb_acc GCA_003246755.1;
genomedb_target db:genomedb|GCA_003246755.1|QKDC01000066.1_27 16 593 evalue:4.5e-195 qcov:96.20 identity:59.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:4e-15 score:55.2 best_domain_score:40.2 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:3.8e-85 score:286.4 best_domain_score:286.1 name:Amidohydro_3;
sp YES;
sprot_desc Putative amidohydrolase YtcJ;
sprot_id sp|O34355|YTCJ_BACSU;
sprot_target db:uniprot_sprot|sp|O34355|YTCJ_BACSU 54 595 evalue:1.3e-52 qcov:90.20 identity:28.00;
tm_num 1;
20866 20958 lipoprotein_signal_peptide
ID metaerg.pl|11557
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
22671 20866 transmembrane_helix
ID metaerg.pl|11558
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology i20884-20952o;
23509 22736 CDS
ID metaerg.pl|11559
allec_ids 1.3.5.1;
allgo_ids GO:0009055; GO:0051536; GO:0070469; GO:0051537; GO:0051538; GO:0051539; GO:0046872; GO:0008177; GO:0006099;
allko_ids K00245; K00235; K00873; K11260; K00122; K00380; K00443; K03390; K00240; K00246; K00123; K11181; K00533; K00124; K00265; K08349; K08264; K03388; K00176; K00125; K00335; K00226; K00205; K00441; K00171;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000047.1_83 1 245 evalue:2.0e-104 qcov:95.30 identity:71.80;
kegg_pathway_id 05012; 00630; 00790; 00640; 00650; 00620; 00632; 00240; 00720; 00130; 00190; 00680; 00633; 00251; 02020; 00910; 00020; 00230; 00710; 00010; 00920;
kegg_pathway_name Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Folate biosynthesis; Propanoate metabolism; Butanoate metabolism; Pyruvate metabolism; Benzoate degradation via CoA ligation; Pyrimidine metabolism; Reductive carboxylate cycle (CO2 fixation); Ubiquinone biosynthesis; Oxidative phosphorylation; Methane metabolism; Trinitrotoluene degradation; Glutamate metabolism; Two-component system - General; Nitrogen metabolism; Citrate cycle (TCA cycle); Purine metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Sulfur metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-4302; PWY0-1353; PWY-5913; TCA; PWY-561; TCA-GLYOX-BYPASS; PWY-3781; PWY0-1329; PWY-5690;
metacyc_pathway_name superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; aerobic respiration III (alternative oxidase pathway);; succinate to cytochrome bd oxidase electron transfer;; partial TCA cycle (obligate autotrophs);; TCA cycle I (prokaryotic);; superpathway of glyoxylate cycle and fatty acid degradation;; superpathway of glyoxylate bypass and TCA;; aerobic respiration I (cytochrome c);; succinate to cytochrome bo oxidase electron transfer;; TCA cycle II (plants and fungi);;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; AEROBIC-RESPIRATION; Electron-Transfer;; AEROBIC-RESPIRATION; Electron-Transfer;; TCA-VARIANTS;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TCA-VARIANTS;; AEROBIC-RESPIRATION; Electron-Transfer;; AEROBIC-RESPIRATION; Electron-Transfer;; TCA-VARIANTS;;
pfam_acc PF13085; PF00037; PF13237; PF13534; PF12797; PF12837; PF12838; PF13183; PF13187;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id Fer2_3; Fer4; Fer4_10; Fer4_17; Fer4_2; Fer4_6; Fer4_7; Fer4_8; Fer4_9;
pfam_target db:Pfam-A.hmm|PF13085.6 evalue:8.7e-22 score:76.4 best_domain_score:75.7 name:Fer2_3; db:Pfam-A.hmm|PF00037.27 evalue:2.2e-06 score:26.5 best_domain_score:26.5 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:1.7e-09 score:36.9 best_domain_score:36.9 name:Fer4_10; db:Pfam-A.hmm|PF13534.6 evalue:1.5e-07 score:31.1 best_domain_score:31.1 name:Fer4_17; db:Pfam-A.hmm|PF12797.7 evalue:2.9e-07 score:29.4 best_domain_score:23.2 name:Fer4_2; db:Pfam-A.hmm|PF12837.7 evalue:9.9e-07 score:27.8 best_domain_score:27.8 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:2.4e-10 score:40.1 best_domain_score:40.1 name:Fer4_7; db:Pfam-A.hmm|PF13183.6 evalue:6.4e-12 score:45.0 best_domain_score:45.0 name:Fer4_8; db:Pfam-A.hmm|PF13187.6 evalue:5.1e-07 score:29.0 best_domain_score:21.2 name:Fer4_9;
sprot_desc Fumarate reductase iron-sulfur subunit;
sprot_id sp|P17596|FRDB_WOLSU;
sprot_target db:uniprot_sprot|sp|P17596|FRDB_WOLSU 3 241 evalue:2.7e-10 qcov:93.00 identity:27.60;
25422 23509 CDS
ID metaerg.pl|11560
allec_ids 1.3.5.1; 1.3.99.1;
allgo_ids GO:0016491; GO:0055114; GO:0005886; GO:0009055; GO:0050660; GO:0008177; GO:0000104; GO:0009061; GO:0006099;
allko_ids K00244; K00234; K00394; K00278; K00239;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000141.1_12 1 637 evalue:5.4e-300 qcov:100.00 identity:77.90;
kegg_pathway_id 00190; 05012; 00650; 00252; 00450; 02020; 00760; 00020; 00632; 00720; 00920;
kegg_pathway_name Oxidative phosphorylation; Parkinson's disease; Butanoate metabolism; Alanine and aspartate metabolism; Selenoamino acid metabolism; Two-component system - General; Nicotinate and nicotinamide metabolism; Citrate cycle (TCA cycle); Benzoate degradation via CoA ligation; Reductive carboxylate cycle (CO2 fixation); Sulfur metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PWY-3781; PWY-4302; GLYCOLYSIS-TCA-GLYOX-BYPASS; P23-PWY; PWY-5464; PWY-5392; PWY-561; TCA-GLYOX-BYPASS; PWY-6146; PWY0-1329; PWY-5690; P105-PWY; PWY0-1353; P42-PWY; PWY-5913; TCA;
metacyc_pathway_name aerobic respiration I (cytochrome c);; aerobic respiration III (alternative oxidase pathway);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; reductive TCA cycle I;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; reductive TCA cycle II;; superpathway of glyoxylate cycle and fatty acid degradation;; superpathway of glyoxylate bypass and TCA;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; succinate to cytochrome bo oxidase electron transfer;; TCA cycle II (plants and fungi);; TCA cycle IV (2-oxoglutarate decarboxylase);; succinate to cytochrome bd oxidase electron transfer;; incomplete reductive TCA cycle;; partial TCA cycle (obligate autotrophs);; TCA cycle I (prokaryotic);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; AEROBIC-RESPIRATION; Electron-Transfer;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TCA-VARIANTS;; Biosynthesis; Super-Pathways;; AEROBIC-RESPIRATION; Electron-Transfer;; TCA-VARIANTS;; TCA-VARIANTS;; AEROBIC-RESPIRATION; Electron-Transfer;; Reductive-TCA-Cycles;; TCA-VARIANTS;; TCA-VARIANTS;;
pfam_acc PF00890; PF02910;
pfam_desc FAD binding domain; Fumarate reductase flavoprotein C-term;
pfam_id FAD_binding_2; Succ_DH_flav_C;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:4.4e-54 score:183.4 best_domain_score:182.8 name:FAD_binding_2; db:Pfam-A.hmm|PF02910.20 evalue:1e-37 score:128.2 best_domain_score:126.8 name:Succ_DH_flav_C;
sprot_desc Succinate dehydrogenase flavoprotein subunit;
sprot_id sp|P08065|SDHA_BACSU;
sprot_target db:uniprot_sprot|sp|P08065|SDHA_BACSU 35 600 evalue:1.6e-85 qcov:88.90 identity:36.60;
tigrfam_acc TIGR01811;
tigrfam_desc succinate dehydrogenase or fumarate reductase, flavoprotein subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name sdhA_Bsu;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01811 evalue:1.8e-285 score:947.5 best_domain_score:947.3 name:TIGR01811;
26116 25433 CDS
ID metaerg.pl|11561
allgo_ids GO:0016627;
allko_ids K00241;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000047.1_85 1 224 evalue:1.7e-62 qcov:98.70 identity:54.40;
kegg_pathway_id 00720; 00020; 00190; 00632; 00650;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Citrate cycle (TCA cycle); Oxidative phosphorylation; Benzoate degradation via CoA ligation; Butanoate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF01127;
pfam_desc Succinate dehydrogenase/Fumarate reductase transmembrane subunit;
pfam_id Sdh_cyt;
pfam_target db:Pfam-A.hmm|PF01127.22 evalue:1.2e-08 score:34.3 best_domain_score:26.9 name:Sdh_cyt;
tigrfam_acc TIGR02046;
tigrfam_desc succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family;
tigrfam_mainrole Energy metabolism;
tigrfam_name sdhC_b558_fam;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR02046 evalue:1.4e-52 score:177.6 best_domain_score:177.4 name:TIGR02046;
tm_num 5;
26116 25433 transmembrane_helix
ID metaerg.pl|11562
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology i25466-25534o25631-25699i25760-25828o25913-25981i26042-26110o;
27132 26209 CDS
ID metaerg.pl|11563
allec_ids 1.1.1.37;
allgo_ids GO:0016616; GO:0055114; GO:0030060; GO:0005975; GO:0019752; GO:0006099;
allko_ids K00016; K00024; K00026; K00025;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000001.1_185 2 306 evalue:3.4e-130 qcov:99.30 identity:77.70;
kegg_pathway_id 00272; 00020; 00710; 00010; 00720; 00640; 00630; 00620;
kegg_pathway_name Cysteine metabolism; Citrate cycle (TCA cycle); Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Reductive carboxylate cycle (CO2 fixation); Propanoate metabolism; Glyoxylate and dicarboxylate metabolism; Pyruvate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id GLYOXYLATE-BYPASS; FERMENTATION-PWY; PWY-5464; P23-PWY; MALATE-ASPARTATE-SHUTTLE-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-1622; PWY-5392; PWY-561; TCA-GLYOX-BYPASS; ANARESP1-PWY; PWY-6146; P105-PWY; PWY-5690; PWY-5913; P42-PWY; P108-PWY; GLUCONEO-PWY; TCA;
metacyc_pathway_name glyoxylate cycle;; mixed acid fermentation;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; reductive TCA cycle I;; L-aspartate degradation II;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; formaldehyde assimilation I (serine pathway);; reductive TCA cycle II;; superpathway of glyoxylate cycle and fatty acid degradation;; superpathway of glyoxylate bypass and TCA;; ; Methanobacterium thermoautotrophicum biosynthetic metabolism;; TCA cycle IV (2-oxoglutarate decarboxylase);; TCA cycle II (plants and fungi);; partial TCA cycle (obligate autotrophs);; incomplete reductive TCA cycle;; pyruvate fermentation to propanoate I;; gluconeogenesis I;; TCA cycle I (prokaryotic);;
metacyc_pathway_type Energy-Metabolism;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism; Super-Pathways;; Reductive-TCA-Cycles;; ASPARTATE-DEG;; Energy-Metabolism; Super-Pathways;; Formaldehyde-Assimilation;; Reductive-TCA-Cycles;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TCA-VARIANTS;; ; Biosynthesis; Super-Pathways;; TCA-VARIANTS;; TCA-VARIANTS;; TCA-VARIANTS;; Reductive-TCA-Cycles;; Pyruvate-Propanoate-Fermentation;; Gluconeogenesis;; TCA-VARIANTS;;
pfam_acc PF02866; PF00056;
pfam_desc lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain;
pfam_id Ldh_1_C; Ldh_1_N;
pfam_target db:Pfam-A.hmm|PF02866.18 evalue:3.4e-26 score:91.4 best_domain_score:90.9 name:Ldh_1_C; db:Pfam-A.hmm|PF00056.23 evalue:2.5e-39 score:133.8 best_domain_score:133.4 name:Ldh_1_N;
sprot_desc Malate dehydrogenase;
sprot_id sp|B3QSH8|MDH_CHLT3;
sprot_target db:uniprot_sprot|sp|B3QSH8|MDH_CHLT3 3 302 evalue:7.9e-110 qcov:97.70 identity:65.00;
tigrfam_acc TIGR01763;
tigrfam_desc malate dehydrogenase, NAD-dependent;
tigrfam_mainrole Energy metabolism;
tigrfam_name MalateDH_bact;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01763 evalue:1.4e-141 score:470.2 best_domain_score:470.1 name:TIGR01763;
27885 27283 CDS
ID metaerg.pl|11564
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000141.1_18 52 197 evalue:5.4e-12 qcov:73.00 identity:40.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
sp YES;
tm_num 1;
27283 27399 signal_peptide
ID metaerg.pl|11565
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
27885 27283 transmembrane_helix
ID metaerg.pl|11566
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology i27343-27411o;
28445 27882 CDS
ID metaerg.pl|11567
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002501085;
genomedb_acc GCA_002501085.1;
genomedb_target db:genomedb|GCA_002501085.1|DLRL01000060.1_5 14 182 evalue:1.1e-11 qcov:90.40 identity:34.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF13490;
pfam_desc Putative zinc-finger;
pfam_id zf-HC2;
pfam_target db:Pfam-A.hmm|PF13490.6 evalue:3.8e-05 score:23.1 best_domain_score:23.1 name:zf-HC2;
tm_num 1;
28445 27882 transmembrane_helix
ID metaerg.pl|11568
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology i28215-28283o;
28995 28429 CDS
ID metaerg.pl|11569
allgo_ids GO:0003700; GO:0006352; GO:0006355;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000141.1_20 12 184 evalue:3.4e-40 qcov:92.00 identity:52.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF07638; PF04542; PF04545; PF08281;
pfam_desc ECF sigma factor; Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_ECF; Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF07638.11 evalue:2e-05 score:23.8 best_domain_score:23.2 name:Sigma70_ECF; db:Pfam-A.hmm|PF04542.14 evalue:4.5e-18 score:64.0 best_domain_score:63.0 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:9.6e-08 score:30.7 best_domain_score:28.8 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:1.7e-10 score:39.6 best_domain_score:37.9 name:Sigma70_r4_2;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:4.7e-26 score:90.5 best_domain_score:90.3 name:TIGR02937;
29392 29084 CDS
ID metaerg.pl|11570
allgo_ids GO:0003677; GO:0005694; GO:0006310; GO:0006355; GO:0006417;
allko_ids K05788;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000011.1_9 1 93 evalue:2.9e-38 qcov:91.20 identity:88.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00216; PF18291;
pfam_desc Bacterial DNA-binding protein; HU domain fused to wHTH, Ig, or Glycine-rich motif;
pfam_id Bac_DNA_binding; HU-HIG;
pfam_target db:Pfam-A.hmm|PF00216.21 evalue:3.5e-32 score:109.7 best_domain_score:109.5 name:Bac_DNA_binding; db:Pfam-A.hmm|PF18291.1 evalue:2.2e-08 score:33.5 best_domain_score:33.3 name:HU-HIG;
sprot_desc Integration host factor subunit beta;
sprot_id sp|B2JF07|IHFB_PARP8;
sprot_target db:uniprot_sprot|sp|B2JF07|IHFB_PARP8 1 95 evalue:1.2e-17 qcov:93.10 identity:49.50;
30525 29389 CDS
ID metaerg.pl|11571
allec_ids 6.3.5.5;
allgo_ids GO:0016787; GO:0005524; GO:0004088; GO:0006207; GO:0044205; GO:0006526; GO:0006541;
allko_ids K11541; K13950; K13497; K01955; K13501; K01658; K01951; K01954; K01665; K01664; K02619; K03342; K11540; K01657; K00609; K01656; K01663; K01956;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002724575;
genomedb_acc GCA_002724575.1;
genomedb_target db:genomedb|GCA_002724575.1|MBO76827.1 9 373 evalue:1.4e-157 qcov:96.60 identity:72.90;
kegg_pathway_id 00983; 00240; 00400; 00230; 00620; 00251; 00252; 02020; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Pyrimidine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Purine metabolism; Pyruvate metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Two-component system - General; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PWY-5154; PRPP-PWY; PWY-5686; ARGSYN-PWY; PWY0-162; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY;
metacyc_pathway_name L-arginine biosynthesis III (via N-acetyl-L-citrulline);; superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;; L-arginine biosynthesis I (via L-ornithine);; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);;
metacyc_pathway_type ARGININE-SYN;; Super-Pathways;; UMP-Biosynthesis;; ARGININE-SYN; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF00988; PF00117; PF07722;
pfam_desc Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; Peptidase C26;
pfam_id CPSase_sm_chain; GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00988.22 evalue:1.9e-53 score:178.9 best_domain_score:178.5 name:CPSase_sm_chain; db:Pfam-A.hmm|PF00117.28 evalue:2.3e-42 score:144.2 best_domain_score:143.8 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:1e-10 score:41.0 best_domain_score:36.2 name:Peptidase_C26;
sprot_desc Carbamoyl-phosphate synthase small chain;
sprot_id sp|Q8KGA2|CARA_CHLTE;
sprot_target db:uniprot_sprot|sp|Q8KGA2|CARA_CHLTE 10 371 evalue:8.2e-109 qcov:95.80 identity:56.30;
tigrfam_acc TIGR01368;
tigrfam_desc carbamoyl-phosphate synthase, small subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name CPSaseIIsmall;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01368 evalue:4.7e-143 score:475.7 best_domain_score:475.5 name:TIGR01368;
30707 31285 CDS
ID metaerg.pl|11572
allec_ids 3.1.26.4;
allgo_ids GO:0003676; GO:0004523; GO:0005737; GO:0000287; GO:0006401;
allko_ids K03469;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91349.1 6 191 evalue:1.1e-73 qcov:96.90 identity:70.40;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00075;
pfam_desc RNase H;
pfam_id RNase_H;
pfam_target db:Pfam-A.hmm|PF00075.24 evalue:1.8e-33 score:115.0 best_domain_score:114.7 name:RNase_H;
sprot_desc Ribonuclease H;
sprot_id sp|A4VLR0|RNH_PSEU5;
sprot_target db:uniprot_sprot|sp|A4VLR0|RNH_PSEU5 12 152 evalue:2.9e-33 qcov:73.40 identity:46.50;
32004 31249 CDS
ID metaerg.pl|11573
allec_ids 2.3.1.181;
allgo_ids GO:0006464; GO:0005737; GO:0033819; GO:0102555; GO:0009249;
allko_ids K03801;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000011.1_12 11 222 evalue:4.1e-65 qcov:84.50 identity:59.40;
kegg_pathway_id 00785;
kegg_pathway_name Lipoic acid metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PWY0-501;
metacyc_pathway_name lipoate biosynthesis and incorporation I;;
metacyc_pathway_type Lipoate-Biosynthesis;;
pfam_acc PF03099;
pfam_desc Biotin/lipoate A/B protein ligase family;
pfam_id BPL_LplA_LipB;
pfam_target db:Pfam-A.hmm|PF03099.19 evalue:5e-07 score:28.9 best_domain_score:28.4 name:BPL_LplA_LipB;
sprot_desc Octanoyltransferase;
sprot_id sp|Q1AT14|LIPB_RUBXD;
sprot_target db:uniprot_sprot|sp|Q1AT14|LIPB_RUBXD 9 218 evalue:3.4e-50 qcov:83.70 identity:51.40;
tigrfam_acc TIGR00214;
tigrfam_desc lipoyl(octanoyl) transferase;
tigrfam_mainrole Protein fate;
tigrfam_name lipB;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00214 evalue:3.4e-46 score:156.3 best_domain_score:156.1 name:TIGR00214;
33479 32025 CDS
ID metaerg.pl|11574
allec_ids 2.3.1.12;
allgo_ids GO:0016746; GO:0004742; GO:0006096; GO:0006099;
allko_ids K00658; K09699; K11381; K00382; K00162; K00163;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000087.1_43 1 484 evalue:1.7e-173 qcov:100.00 identity:69.80;
kegg_pathway_id 00620; 00252; 00650; 00290; 00010; 00310; 00280; 00020; 00260;
kegg_pathway_name Pyruvate metabolism; Alanine and aspartate metabolism; Butanoate metabolism; Valine, leucine and isoleucine biosynthesis; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine degradation; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PWY-5173; PYRUVDEHYD-PWY; PWY-5464;
metacyc_pathway_name superpathway of acetyl-CoA biosynthesis;; pyruvate decarboxylation to acetyl CoA;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00198; PF00364; PF13533; PF02817;
pfam_desc 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme; Biotin-lipoyl like; e3 binding domain;
pfam_id 2-oxoacid_dh; Biotin_lipoyl; Biotin_lipoyl_2; E3_binding;
pfam_target db:Pfam-A.hmm|PF00198.23 evalue:8.5e-65 score:217.7 best_domain_score:217.2 name:2-oxoacid_dh; db:Pfam-A.hmm|PF00364.22 evalue:5e-23 score:80.0 best_domain_score:78.8 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:1.2e-06 score:27.5 best_domain_score:19.1 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF02817.17 evalue:2.2e-13 score:49.5 best_domain_score:47.9 name:E3_binding;
sprot_desc Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex;
sprot_id sp|Q8NNJ2|ODP2_CORGL;
sprot_target db:uniprot_sprot|sp|Q8NNJ2|ODP2_CORGL 2 478 evalue:2.4e-68 qcov:98.60 identity:41.70;
34074 33697 CDS
ID metaerg.pl|11575
allgo_ids GO:0009306; GO:0015450; GO:0016021;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000011.1_16 1 120 evalue:2.3e-24 qcov:96.00 identity:63.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF03840;
pfam_desc Preprotein translocase SecG subunit;
pfam_id SecG;
pfam_target db:Pfam-A.hmm|PF03840.14 evalue:1.1e-17 score:63.1 best_domain_score:63.1 name:SecG;
tigrfam_acc TIGR00810;
tigrfam_desc preprotein translocase, SecG subunit;
tigrfam_mainrole Protein fate;
tigrfam_name secG;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00810 evalue:2.8e-18 score:64.9 best_domain_score:64.9 name:TIGR00810;
tm_num 2;
34074 33697 transmembrane_helix
ID metaerg.pl|11576
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology i33700-33768o33853-33921i;
35063 34227 CDS
ID metaerg.pl|11577
allec_ids 5.3.1.1;
allgo_ids GO:0004807; GO:0005737; GO:0006094; GO:0006096;
allko_ids K01803;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000011.1_17 5 274 evalue:1.3e-59 qcov:97.10 identity:53.00;
kegg_pathway_id 00051; 00710; 00010;
kegg_pathway_name Fructose and mannose metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id GLYCOLYSIS-E-D; PWY-6146; GLYCOLYSIS; PHOTOALL-PWY; P185-PWY; PWY-5484; PWY66-373; P461-PWY; P341-PWY; PWY-6142; CALVIN-PWY; P441-PWY; PWY-1042; ANAEROFRUCAT-PWY; PWY-3801; PWY-5464; ANAGLYCOLYSIS-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS;
metacyc_pathway_name superpathway of glycolysis and the Entner-Doudoroff pathway;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; glycolysis I (from glucose 6-phosphate);; oxygenic photosynthesis;; formaldehyde assimilation III (dihydroxyacetone cycle);; glycolysis II (from fructose 6-phosphate);; sucrose degradation V (sucrose α-glucosidase);; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis V (Pyrococcus);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; Calvin-Benson-Bassham cycle;; superpathway of N-acetylneuraminate degradation;; glycolysis IV (plant cytosol);; homolactic fermentation;; sucrose degradation II (sucrose synthase);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Biosynthesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Photosynthesis; Super-Pathways;; Formaldehyde-Assimilation;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; CARBOXYLATES-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; SUCROSE-DEG;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00121;
pfam_desc Triosephosphate isomerase;
pfam_id TIM;
pfam_target db:Pfam-A.hmm|PF00121.18 evalue:7.4e-69 score:231.0 best_domain_score:230.7 name:TIM;
sprot_desc Triosephosphate isomerase;
sprot_id sp|Q01SE4|TPIS_SOLUE;
sprot_target db:uniprot_sprot|sp|Q01SE4|TPIS_SOLUE 1 270 evalue:2.0e-48 qcov:97.10 identity:40.70;
tigrfam_acc TIGR00419;
tigrfam_desc triose-phosphate isomerase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tim;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00419 evalue:5.8e-41 score:139.9 best_domain_score:139.1 name:TIGR00419;
36376 35060 CDS
ID metaerg.pl|11578
allec_ids 2.7.2.3;
allgo_ids GO:0004618; GO:0006096; GO:0005737; GO:0005524;
allko_ids K00927;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000087.1_38 7 402 evalue:8.2e-122 qcov:90.40 identity:60.60;
kegg_pathway_id 00010; 00710;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id GLUCONEO-PWY; PHOTOALL-PWY; P124-PWY; P185-PWY; GLYCOLYSIS-E-D; P122-PWY; GLYCOLYSIS; P441-PWY; ANAEROFRUCAT-PWY; PWY-1042; PWY-3801; PWY-5464; ANAGLYCOLYSIS-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5484; P461-PWY; CALVIN-PWY;
metacyc_pathway_name gluconeogenesis I;; oxygenic photosynthesis;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; superpathway of glycolysis and the Entner-Doudoroff pathway;; heterolactic fermentation;; glycolysis I (from glucose 6-phosphate);; superpathway of N-acetylneuraminate degradation;; homolactic fermentation;; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; glycolysis III (from glucose);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; Calvin-Benson-Bassham cycle;;
metacyc_pathway_type Gluconeogenesis;; Photosynthesis; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; GLYCOLYSIS-VARIANTS;; CARBOXYLATES-DEG; Super-Pathways;; Fermentation-to-Lactate; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;;
pfam_acc PF00162;
pfam_desc Phosphoglycerate kinase;
pfam_id PGK;
pfam_target db:Pfam-A.hmm|PF00162.19 evalue:9e-133 score:442.1 best_domain_score:441.8 name:PGK;
sprot_desc Phosphoglycerate kinase;
sprot_id sp|B3QLX7|PGK_CHLP8;
sprot_target db:uniprot_sprot|sp|B3QLX7|PGK_CHLP8 6 402 evalue:1.1e-104 qcov:90.60 identity:51.00;
37408 36380 CDS
ID metaerg.pl|11579
allec_ids 1.2.1.12; 1.2.1.-;
allgo_ids GO:0016620; GO:0055114; GO:0005737; GO:0004365; GO:0051287; GO:0050661; GO:0006006; GO:0006096;
allko_ids K10705; K00134;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000087.1_35 1 336 evalue:6.4e-138 qcov:98.20 identity:73.80;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PWY-5195; P461-PWY; PWY-5484; ANAGLYCOLYSIS-PWY; PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAEROFRUCAT-PWY; PWY-1042; PWY-3801; PWY-5482; P441-PWY; GLYCOLYSIS; ANARESP1-PWY; P105-PWY; P41-PWY; PWY-5305; PWY-6537; PWY-321; P122-PWY; GLYCOLYSIS-E-D; 4TOLCARBDEG-PWY; PWY-5537; TOLSULFDEG-PWY; P124-PWY; P185-PWY; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; GLUCONEO-PWY;
metacyc_pathway_name artemisinin and arteannuin B biosynthesis;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; homolactic fermentation;; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);; pyruvate fermentation to acetate II;; superpathway of N-acetylneuraminate degradation;; glycolysis I (from glucose 6-phosphate);; ; TCA cycle IV (2-oxoglutarate decarboxylase);; pyruvate fermentation to acetate and (S)-lactate I;; bixin biosynthesis;; 4-aminobutanoate degradation II;; cutin biosynthesis;; heterolactic fermentation;; superpathway of glycolysis and the Entner-Doudoroff pathway;; 4-toluenecarboxylate degradation;; pyruvate fermentation to acetate V;; 4-toluenesulfonate degradation I;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; 4-hydroxyphenylacetate degradation;; gluconeogenesis I;;
metacyc_pathway_type SESQUITERPENE-LACTONE;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Lactate; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Pyruvate-Acetate-Fermentation;; CARBOXYLATES-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; ; TCA-VARIANTS;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; APOCAROTENOID-SYN;; 4-Aminobutyraye-Degradation;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Energy-Metabolism; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; Pyruvate-Acetate-Fermentation; Super-Pathways;; 4-Toluenesulfonate-Degradation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; AROMATIC-COMPOUNDS-DEGRADATION;; Gluconeogenesis;;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:1e-65 score:219.4 best_domain_score:218.9 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:6.7e-40 score:134.8 best_domain_score:133.6 name:Gp_dh_N;
sprot_desc Glyceraldehyde-3-phosphate dehydrogenase;
sprot_id sp|P00362|G3P_GEOSE;
sprot_target db:uniprot_sprot|sp|P00362|G3P_GEOSE 1 335 evalue:2.1e-119 qcov:98.00 identity:63.30;
tigrfam_acc TIGR01534;
tigrfam_desc glyceraldehyde-3-phosphate dehydrogenase, type I;
tigrfam_mainrole Energy metabolism;
tigrfam_name GAPDH-I;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01534 evalue:2.1e-137 score:456.9 best_domain_score:456.7 name:TIGR01534;
38087 37488 CDS
ID metaerg.pl|11580
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000087.1_34 5 169 evalue:4.4e-30 qcov:82.90 identity:53.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
39196 38318 CDS
ID metaerg.pl|11581
allec_ids 1.1.1.25;
allgo_ids GO:0004764; GO:0055114; GO:0050661; GO:0009073; GO:0009423; GO:0019632;
allko_ids K13832; K00891; K00014;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91359.1 6 285 evalue:2.0e-63 qcov:95.90 identity:53.20;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id ALL-CHORISMATE-PWY; PWY-6163; COMPLETE-ARO-PWY; PWY-6165; ARO-PWY;
metacyc_pathway_name superpathway of chorismate metabolism;; chorismate biosynthesis from 3-dehydroquinate;; superpathway of aromatic amino acid biosynthesis;; chorismate biosynthesis II (archaea);; chorismate biosynthesis I;;
metacyc_pathway_type Super-Pathways;; Chorismate-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;;
pfam_acc PF18317; PF01488; PF08501;
pfam_desc Shikimate 5'-dehydrogenase C-terminal domain; Shikimate / quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain;
pfam_id SDH_C; Shikimate_DH; Shikimate_dh_N;
pfam_target db:Pfam-A.hmm|PF18317.1 evalue:8.2e-08 score:31.1 best_domain_score:30.1 name:SDH_C; db:Pfam-A.hmm|PF01488.20 evalue:4e-08 score:32.7 best_domain_score:32.0 name:Shikimate_DH; db:Pfam-A.hmm|PF08501.11 evalue:1.5e-21 score:75.7 best_domain_score:75.1 name:Shikimate_dh_N;
sprot_desc Shikimate dehydrogenase (NADP(+));
sprot_id sp|B9LSZ3|AROE_HALLT;
sprot_target db:uniprot_sprot|sp|B9LSZ3|AROE_HALLT 10 290 evalue:2.8e-40 qcov:96.20 identity:39.80;
tigrfam_acc TIGR00507;
tigrfam_desc shikimate dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name aroE;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00507 evalue:5.7e-60 score:201.9 best_domain_score:201.5 name:TIGR00507;
40424 39210 CDS
ID metaerg.pl|11582
allec_ids 2.7.7.60;
allgo_ids GO:0070567;
allko_ids K04042; K02536; K11528;
kegg_pathway_id 00540; 00530;
kegg_pathway_name Lipopolysaccharide biosynthesis; Aminosugars metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PWY-6270; NONMEVIPP-PWY; PWY-5121;
metacyc_pathway_name isoprene biosynthesis I;; methylerythritol phosphate pathway I;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);;
metacyc_pathway_type ISOPRENOIDS; Super-Pathways;; MEP-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;;
pfam_acc PF01128; PF01451; PF12804;
pfam_desc 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Low molecular weight phosphotyrosine protein phosphatase; MobA-like NTP transferase domain;
pfam_id IspD; LMWPc; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF01128.19 evalue:9.6e-67 score:224.2 best_domain_score:223.8 name:IspD; db:Pfam-A.hmm|PF01451.21 evalue:4.7e-28 score:97.6 best_domain_score:97.1 name:LMWPc; db:Pfam-A.hmm|PF12804.7 evalue:5.8e-11 score:42.2 best_domain_score:42.2 name:NTP_transf_3;
tigrfam_acc TIGR00453;
tigrfam_desc 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ispD;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00453 evalue:3.5e-66 score:221.9 best_domain_score:221.6 name:TIGR00453;
41829 40405 CDS
ID metaerg.pl|11583
allec_ids 3.6.4.12;
allgo_ids GO:0003678; GO:0005524; GO:0006260; GO:0005829; GO:1990077; GO:0003677; GO:0006269; GO:0006268;
allko_ids K02314;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25938.1 12 454 evalue:5.7e-177 qcov:93.50 identity:70.30;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF13481; PF00772; PF03796;
pfam_desc AAA domain; DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain;
pfam_id AAA_25; DnaB; DnaB_C;
pfam_target db:Pfam-A.hmm|PF13481.6 evalue:3.4e-12 score:45.6 best_domain_score:44.8 name:AAA_25; db:Pfam-A.hmm|PF00772.21 evalue:1.1e-31 score:108.1 best_domain_score:107.1 name:DnaB; db:Pfam-A.hmm|PF03796.15 evalue:3.3e-111 score:369.9 best_domain_score:369.6 name:DnaB_C;
sprot_desc Replicative DNA helicase;
sprot_id sp|P37469|DNAC_BACSU;
sprot_target db:uniprot_sprot|sp|P37469|DNAC_BACSU 13 457 evalue:1.0e-108 qcov:93.90 identity:47.90;
tigrfam_acc TIGR00665;
tigrfam_desc replicative DNA helicase;
tigrfam_mainrole DNA metabolism;
tigrfam_name DnaB;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00665 evalue:1.8e-171 score:569.9 best_domain_score:569.7 name:TIGR00665;
42623 41826 CDS
ID metaerg.pl|11584
allec_ids 3.2.2.-;
allko_ids K10800; K02334; K02337; K03648;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000087.1_28 19 260 evalue:7.3e-73 qcov:91.30 identity:60.00;
kegg_pathway_id 03030; 03410;
kegg_pathway_name DNA replication; Base excision repair;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PWY-2681; PWY-5381;
metacyc_pathway_name trans-zeatin biosynthesis;; pyridine nucleotide cycling (plants);;
metacyc_pathway_type CYTOKININ-BIOSYNTHESIS;; NAD-Metabolism;;
pfam_acc PF03167;
pfam_desc Uracil DNA glycosylase superfamily;
pfam_id UDG;
pfam_target db:Pfam-A.hmm|PF03167.19 evalue:1.1e-43 score:148.1 best_domain_score:147.6 name:UDG;
tigrfam_acc TIGR00758;
tigrfam_desc uracil-DNA glycosylase, family 4;
tigrfam_mainrole DNA metabolism;
tigrfam_name UDG_fam4;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00758 evalue:9.6e-62 score:206.9 best_domain_score:206.5 name:TIGR00758;
43920 42634 CDS
ID metaerg.pl|11585
allec_ids 4.1.1.36; 6.3.2.5; 4.1.1.36 6.3.2.5;
allgo_ids GO:0003824; GO:0010181; GO:0046872; GO:0004632; GO:0004633; GO:0015937; GO:0015941;
allko_ids K13038;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25940.1 5 419 evalue:3.9e-124 qcov:97.00 identity:58.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id COA-PWY; PWY-4221; PWY-4242; PANTOSYN-PWY;
metacyc_pathway_name coenzyme A biosynthesis I (prokaryotic);; superpathway of coenzyme A biosynthesis II (plants);; ; superpathway of coenzyme A biosynthesis I (bacteria);;
metacyc_pathway_type CoA-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;; ; CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;;
pfam_acc PF04127; PF02441;
pfam_desc DNA / pantothenate metabolism flavoprotein; Flavoprotein;
pfam_id DFP; Flavoprotein;
pfam_target db:Pfam-A.hmm|PF04127.15 evalue:3.4e-60 score:202.3 best_domain_score:197.7 name:DFP; db:Pfam-A.hmm|PF02441.19 evalue:3.6e-36 score:123.5 best_domain_score:123.0 name:Flavoprotein;
sprot_desc Coenzyme A biosynthesis bifunctional protein CoaBC;
sprot_id sp|Q9KVD1|COABC_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KVD1|COABC_VIBCH 15 421 evalue:3.9e-75 qcov:95.10 identity:42.10;
tigrfam_acc TIGR00521;
tigrfam_desc phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name coaBC_dfp;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00521 evalue:4.3e-104 score:347.8 best_domain_score:347.6 name:TIGR00521;
44140 43925 CDS
ID metaerg.pl|11586
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002348465;
genomedb_acc GCA_002348465.1;
genomedb_target db:genomedb|GCA_002348465.1|DEBI01000028.1_6 1 70 evalue:1.3e-21 qcov:98.60 identity:81.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
44977 44318 CDS
ID metaerg.pl|11587
allec_ids 2.7.4.8;
allgo_ids GO:0005737; GO:0005524; GO:0004385;
allko_ids K00942;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000087.1_25 2 216 evalue:3.2e-58 qcov:98.20 identity:56.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PRPP-PWY; P1-PWY; PWY-6125; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; ; superpathway of guanosine nucleotides de novo biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Super-Pathways;; ; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00625;
pfam_desc Guanylate kinase;
pfam_id Guanylate_kin;
pfam_target db:Pfam-A.hmm|PF00625.21 evalue:1.3e-49 score:167.6 best_domain_score:167.4 name:Guanylate_kin;
sprot_desc Guanylate kinase;
sprot_id sp|Q67PR9|KGUA_SYMTH;
sprot_target db:uniprot_sprot|sp|Q67PR9|KGUA_SYMTH 12 195 evalue:7.5e-46 qcov:84.00 identity:51.60;
tigrfam_acc TIGR03263;
tigrfam_desc guanylate kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name guanyl_kin;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR03263 evalue:1.3e-67 score:226.0 best_domain_score:225.8 name:TIGR03263;
45864 44974 CDS
ID metaerg.pl|11588
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000087.1_24 1 296 evalue:3.4e-71 qcov:100.00 identity:52.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF08340; PF03755;
pfam_desc Domain of unknown function (DUF1732); YicC-like family, N-terminal region;
pfam_id DUF1732; YicC_N;
pfam_target db:Pfam-A.hmm|PF08340.11 evalue:1.9e-29 score:100.7 best_domain_score:99.3 name:DUF1732; db:Pfam-A.hmm|PF03755.13 evalue:2.7e-29 score:101.8 best_domain_score:101.0 name:YicC_N;
sprot_desc hypothetical protein;
sprot_id sp|O34441|YLOC_BACSU;
sprot_target db:uniprot_sprot|sp|O34441|YLOC_BACSU 1 296 evalue:6.6e-29 qcov:100.00 identity:30.70;
tigrfam_acc TIGR00255;
tigrfam_desc TIGR00255 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00255;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00255 evalue:2.8e-55 score:187.2 best_domain_score:187.0 name:TIGR00255;
48055 46040 CDS
ID metaerg.pl|11589
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000006.1_22 30 671 evalue:9.4e-101 qcov:95.70 identity:37.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF07715;
pfam_desc TonB-dependent Receptor Plug Domain;
pfam_id Plug;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:1.2e-06 score:28.3 best_domain_score:27.1 name:Plug;
sp YES;
tm_num 1;
46040 46141 signal_peptide
ID metaerg.pl|11590
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
48055 46040 transmembrane_helix
ID metaerg.pl|11591
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology i46058-46126o;
49715 48090 CDS
ID metaerg.pl|11592
allec_ids 3.4.11.1;
allgo_ids GO:0004177; GO:0005622; GO:0006508; GO:0005737; GO:0030145; GO:0008235;
allko_ids K01259; K01255; K11142;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000001.1_156 1 540 evalue:1.2e-146 qcov:99.80 identity:55.90;
kegg_pathway_id 00330; 00480;
kegg_pathway_name Arginine and proline metabolism; Glutathione metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PWY-5988; PWY-6018;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF00883; PF02789;
pfam_desc Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain;
pfam_id Peptidase_M17; Peptidase_M17_N;
pfam_target db:Pfam-A.hmm|PF00883.21 evalue:8.8e-119 score:395.6 best_domain_score:395.3 name:Peptidase_M17; db:Pfam-A.hmm|PF02789.17 evalue:3e-17 score:61.9 best_domain_score:56.1 name:Peptidase_M17_N;
sprot_desc Probable cytosol aminopeptidase;
sprot_id sp|Q3A831|AMPA_PELCD;
sprot_target db:uniprot_sprot|sp|Q3A831|AMPA_PELCD 30 537 evalue:2.4e-101 qcov:93.90 identity:44.40;
50008 50769 CDS
ID metaerg.pl|11593
allec_ids 1.1.1.385;
allgo_ids GO:0003824; GO:0050662; GO:0016491; GO:0017000;
genomedb_OC d__Bacteria;p__Dadabacteria;c__UBA1144;o__UBA2774;f__CSP1-2;g__CSP1-2;s__CSP1-2 sp001443445;
genomedb_acc GCA_001443445.1;
genomedb_target db:genomedb|GCA_001443445.1|KRT66650.1 18 249 evalue:5.4e-41 qcov:91.70 identity:40.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00106; PF13561; PF01370; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain;
pfam_id adh_short; adh_short_C2; Epimerase; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:3e-35 score:120.7 best_domain_score:120.3 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.5e-34 score:118.1 best_domain_score:116.6 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:5.5e-09 score:35.1 best_domain_score:33.2 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:4.8e-06 score:25.8 best_domain_score:24.7 name:KR;
sprot_desc Dihydroanticapsin 7-dehydrogenase;
sprot_id sp|Q8KWT4|BACC_BACIU;
sprot_target db:uniprot_sprot|sp|Q8KWT4|BACC_BACIU 18 253 evalue:1.1e-19 qcov:93.30 identity:32.30;
50999 52084 CDS
ID metaerg.pl|11594
allgo_ids GO:0042651; GO:0046872; GO:0006811; GO:0055072;
allko_ids K02012;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25947.1 21 361 evalue:9.8e-121 qcov:94.50 identity:62.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF01547; PF13531; PF13343; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_11; SBP_bac_6; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:1.5e-09 score:37.5 best_domain_score:35.1 name:SBP_bac_1; db:Pfam-A.hmm|PF13531.6 evalue:7.4e-16 score:57.8 best_domain_score:57.2 name:SBP_bac_11; db:Pfam-A.hmm|PF13343.6 evalue:1.2e-20 score:73.2 best_domain_score:72.9 name:SBP_bac_6; db:Pfam-A.hmm|PF13416.6 evalue:1.3e-19 score:70.4 best_domain_score:69.3 name:SBP_bac_8;
sp YES;
sprot_desc Iron deficiency-induced protein A;
sprot_id sp|Q8DLH9|IDIA_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DLH9|IDIA_THEEB 47 361 evalue:3.8e-95 qcov:87.30 identity:53.00;
50999 51115 lipoprotein_signal_peptide
ID metaerg.pl|11595
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
52186 53781 CDS
ID metaerg.pl|11596
allgo_ids GO:0016020; GO:0055085;
allko_ids K02011;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25948.1 19 526 evalue:1.5e-178 qcov:95.70 identity:65.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.3e-21 score:74.7 best_domain_score:51.4 name:BPD_transp_1;
tm_num 12;
52186 53781 transmembrane_helix
ID metaerg.pl|11597
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology i52189-52257o52285-52353i52414-52482o52552-52620i52780-52848o52858-52917i53011-53079o53146-53214i53251-53319o53362-53430i53539-53598o53698-53766i;
55977 53830 CDS
ID metaerg.pl|11598
allgo_ids GO:0005515;
allko_ids K02482; K08801; K02480; K07638; K07653; K07636; K13587; K02030; K11527; K07678; K10715; K02668; K03388; K08479; K10916; K02489; K07716; K07710; K07640; K01768; K07656; K02486; K11383; K07769; K04757; K11357; K11629; K10125; K07647; K10942; K07717; K07675; K10681; K07676; K06379; K07709; K07644; K07778; K11633; K07768; K07711; K07648; K07651; K07654; K00936; K07682; K07649; K03407; K07646; K13598; K07641; K07673; K07639; K08475; K07652; K07645; K07677; K07708; K07704; K08282; K07643; K11711; K07642; K02484; K11640;
kegg_pathway_id 02020; 03090; 05111; 00790; 00230;
kegg_pathway_name Two-component system - General; Type II secretion system; Vibrio cholerae pathogenic cycle; Folate biosynthesis; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF01590; PF13185; PF02518;
pfam_desc GAF domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;
pfam_id GAF; GAF_2; HATPase_c;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:1.7e-09 score:37.6 best_domain_score:34.9 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:7.1e-07 score:28.8 best_domain_score:26.5 name:GAF_2; db:Pfam-A.hmm|PF02518.26 evalue:3.7e-14 score:52.4 best_domain_score:51.8 name:HATPase_c;
56546 56172 CDS
ID metaerg.pl|11599
allec_ids 3.6.1.65;
allgo_ids GO:0016787; GO:0006281;
allko_ids K03574; K01529; K08310; K01515; K08320;
genomedb_OC d__Bacteria;p__Chloroflexota;c__UBA2235;o__UBA12225;f__UBA12225;g__UBA12225;s__UBA12225 sp002347925;
genomedb_acc GCA_002347925.1;
genomedb_target db:genomedb|GCA_002347925.1|DDYL01000156.1_15 1 118 evalue:1.7e-32 qcov:95.20 identity:61.00;
kegg_pathway_id 00790; 00230;
kegg_pathway_name Folate biosynthesis; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00293; PF14815;
pfam_desc NUDIX domain; NUDIX domain;
pfam_id NUDIX; NUDIX_4;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:2.9e-17 score:62.2 best_domain_score:62.0 name:NUDIX; db:Pfam-A.hmm|PF14815.6 evalue:5.8e-11 score:41.6 best_domain_score:40.9 name:NUDIX_4;
sprot_desc CTP pyrophosphohydrolase;
sprot_id sp|P77788|NUDG_ECOLI;
sprot_target db:uniprot_sprot|sp|P77788|NUDG_ECOLI 1 115 evalue:8.6e-15 qcov:92.70 identity:40.70;
58103 56580 CDS
ID metaerg.pl|11600
allgo_ids GO:0004185; GO:0006508;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Salinibacteraceae;g__Tc-Br11-B2g6-7;s__Tc-Br11-B2g6-7 sp001564055;
genomedb_acc GCA_001564055.1;
genomedb_target db:genomedb|GCA_001564055.1|LKNB01000087.1_8 10 506 evalue:3.3e-199 qcov:98.00 identity:67.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00450;
pfam_desc Serine carboxypeptidase;
pfam_id Peptidase_S10;
pfam_target db:Pfam-A.hmm|PF00450.22 evalue:4.2e-13 score:48.7 best_domain_score:47.8 name:Peptidase_S10;
sp YES;
56580 56684 signal_peptide
ID metaerg.pl|11601
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
58366 59148 CDS
ID metaerg.pl|11602
allko_ids K01697; K00031; K02000; K11527; K05847; K00641; K00088; K00970; K00974; K02806;
genomedb_OC d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Ga0077539;g__Ga0077539;s__Ga0077539 sp001465015;
genomedb_acc GCA_001465015.1;
genomedb_target db:genomedb|GCA_001465015.1|LNEO01000151.1_17 1 260 evalue:1.1e-49 qcov:100.00 identity:46.00;
kegg_pathway_id 02060; 02010; 00450; 00020; 00260; 00230; 00720; 00983; 00480; 00271; 00920;
kegg_pathway_name Phosphotransferase system (PTS); ABC transporters - General; Selenoamino acid metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Purine metabolism; Reductive carboxylate cycle (CO2 fixation); Drug metabolism - other enzymes; Glutathione metabolism; Methionine metabolism; Sulfur metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00571;
pfam_desc CBS domain;
pfam_id CBS;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:1.7e-44 score:149.3 best_domain_score:51.7 name:CBS;
59252 59986 CDS
ID metaerg.pl|11603
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
sp YES;
59252 59326 lipoprotein_signal_peptide
ID metaerg.pl|11604
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
60470 59976 CDS
ID metaerg.pl|11605
genomedb_OC d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Methylomirabilales;f__CSP1-5;g__CSP1-5;s__CSP1-5 sp001443495;
genomedb_acc GCA_001443495.1;
genomedb_target db:genomedb|GCA_001443495.1|KRT70350.1 7 131 evalue:2.8e-30 qcov:76.20 identity:57.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF04173; PF07681;
pfam_desc TQO small subunit DoxD; DoxX;
pfam_id DoxD; DoxX;
pfam_target db:Pfam-A.hmm|PF04173.13 evalue:1.8e-06 score:27.2 best_domain_score:25.9 name:DoxD; db:Pfam-A.hmm|PF07681.12 evalue:2e-10 score:40.4 best_domain_score:38.8 name:DoxX;
tm_num 4;
60470 59976 transmembrane_helix
ID metaerg.pl|11606
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology i60012-60071o60114-60182i60195-60263o60291-60359i;
60667 61878 CDS
ID metaerg.pl|11607
casgene_acc COG2378_WYL_CAS-I:CAS-III; pfam13280_WYL_CAS-I:CAS-III;
casgene_name WYL; WYL;
casgene_target db:casgenes.hmm|COG2378_WYL_CAS-I:CAS-III evalue:3.5e-22 score:78.5 best_domain_score:66.1 name:WYL; db:casgenes.hmm|pfam13280_WYL_CAS-I:CAS-III evalue:1.9e-32 score:111.9 best_domain_score:111.2 name:WYL;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89115.1 4 396 evalue:3.5e-58 qcov:97.50 identity:41.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF13280;
pfam_desc WYL domain;
pfam_id WYL;
pfam_target db:Pfam-A.hmm|PF13280.6 evalue:5.2e-31 score:107.2 best_domain_score:106.6 name:WYL;
sprot_desc hypothetical protein;
sprot_id sp|P64942|PAFB_MYCBO;
sprot_target db:uniprot_sprot|sp|P64942|PAFB_MYCBO 1 393 evalue:1.1e-13 qcov:97.50 identity:27.60;
61875 62972 CDS
ID metaerg.pl|11608
casgene_acc COG2378_WYL_CAS-I:CAS-III; pfam13280_WYL_CAS-I:CAS-III;
casgene_name WYL; WYL;
casgene_target db:casgenes.hmm|COG2378_WYL_CAS-I:CAS-III evalue:2.5e-24 score:85.6 best_domain_score:67.2 name:WYL; db:casgenes.hmm|pfam13280_WYL_CAS-I:CAS-III evalue:1.6e-28 score:99.1 best_domain_score:98.2 name:WYL;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89116.1 8 360 evalue:2.0e-36 qcov:96.70 identity:36.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF13280;
pfam_desc WYL domain;
pfam_id WYL;
pfam_target db:Pfam-A.hmm|PF13280.6 evalue:2.2e-27 score:95.4 best_domain_score:94.4 name:WYL;
63096 63683 CDS
ID metaerg.pl|11609
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Ponticaulis;s__Ponticaulis sp002692725;
genomedb_acc GCA_002692725.1;
genomedb_target db:genomedb|GCA_002692725.1|MAK60340.1 1 160 evalue:5.8e-11 qcov:82.10 identity:33.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00440;
pfam_desc Bacterial regulatory proteins, tetR family;
pfam_id TetR_N;
pfam_target db:Pfam-A.hmm|PF00440.23 evalue:5.4e-14 score:51.0 best_domain_score:49.9 name:TetR_N;
63735 64334 CDS
ID metaerg.pl|11610
allgo_ids GO:0006355;
allko_ids K07641; K07654; K04486; K08282; K11527; K07653; K07636; K07709; K01769; K06379; K07675; K04757; K02342;
kegg_pathway_id 00230; 03030; 00340; 02020;
kegg_pathway_name Purine metabolism; DNA replication; Histidine metabolism; Two-component system - General;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00989; PF08448;
pfam_desc PAS fold; PAS fold;
pfam_id PAS; PAS_4;
pfam_target db:Pfam-A.hmm|PF00989.25 evalue:1.1e-05 score:24.7 best_domain_score:22.5 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:3e-14 score:52.4 best_domain_score:51.8 name:PAS_4;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.6e-08 score:33.9 best_domain_score:33.3 name:TIGR00229;
64434 65447 CDS
ID metaerg.pl|11611
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000010.1_59 7 333 evalue:1.4e-84 qcov:97.00 identity:53.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
sp YES;
tm_num 1;
64434 64511 signal_peptide
ID metaerg.pl|11612
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
64434 65447 transmembrane_helix
ID metaerg.pl|11613
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology i64452-64520o;
66006 65470 CDS
ID metaerg.pl|11614
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90537.1 1 165 evalue:1.5e-37 qcov:92.70 identity:51.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF04893;
pfam_desc Yip1 domain;
pfam_id Yip1;
pfam_target db:Pfam-A.hmm|PF04893.17 evalue:2.2e-12 score:46.3 best_domain_score:45.8 name:Yip1;
tm_num 5;
66006 65470 transmembrane_helix
ID metaerg.pl|11615
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology o65563-65622i65641-65709o65752-65820i65824-65883o65911-65979i;
66260 67546 CDS
ID metaerg.pl|11616
allgo_ids GO:0006281;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000087.1_20 4 427 evalue:4.1e-118 qcov:99.10 identity:56.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00817;
pfam_desc impB/mucB/samB family;
pfam_id IMS;
pfam_target db:Pfam-A.hmm|PF00817.20 evalue:5.5e-13 score:48.4 best_domain_score:47.9 name:IMS;
67631 67861 CDS
ID metaerg.pl|11617
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000087.1_19 1 76 evalue:9.9e-15 qcov:100.00 identity:53.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
68010 68384 CDS
ID metaerg.pl|11618
allec_ids 4.2.1.96;
allgo_ids GO:0006729; GO:0008124;
allko_ids K01724;
genomedb_OC d__Bacteria;p__UBA10199;c__UBA10199;o__UBA10199;f__UBA10199;g__UBA10199;s__UBA10199 sp001797365;
genomedb_acc GCA_001797365.1;
genomedb_target db:genomedb|GCA_001797365.1|OGP10203.1 5 109 evalue:1.2e-25 qcov:84.70 identity:51.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PHENYLALANINE-DEG1-PWY;
metacyc_pathway_name L-phenylalanine degradation I (aerobic);;
metacyc_pathway_type PHENYLALANINE-DEG;;
pfam_acc PF01329;
pfam_desc Pterin 4 alpha carbinolamine dehydratase;
pfam_id Pterin_4a;
pfam_target db:Pfam-A.hmm|PF01329.19 evalue:5.7e-28 score:96.2 best_domain_score:95.9 name:Pterin_4a;
sprot_desc Putative pterin-4-alpha-carbinolamine dehydratase;
sprot_id sp|B9LPE3|PHS_HALLT;
sprot_target db:uniprot_sprot|sp|B9LPE3|PHS_HALLT 1 109 evalue:3.7e-26 qcov:87.90 identity:46.80;
68446 68931 CDS
ID metaerg.pl|11619
allec_ids 3.1.-.-;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__Palsa-1233;s__Palsa-1233 sp003169895;
genomedb_acc GCA_003169895.1;
genomedb_target db:genomedb|GCA_003169895.1|PNAE01000007.1_1022 1 159 evalue:7.9e-46 qcov:98.80 identity:58.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF12850;
pfam_desc Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos_2;
pfam_target db:Pfam-A.hmm|PF12850.7 evalue:1e-36 score:125.9 best_domain_score:125.7 name:Metallophos_2;
tigrfam_acc TIGR00040;
tigrfam_desc phosphodiesterase, MJ0936 family;
tigrfam_mainrole Unknown function;
tigrfam_name yfcE;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00040 evalue:1.5e-28 score:99.1 best_domain_score:98.8 name:TIGR00040;
69270 72470 CDS
ID metaerg.pl|11620
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rhodothermaceae;g__Rhodothermus;s__Rhodothermus marinus;
genomedb_acc GCF_000024845.1;
genomedb_target db:genomedb|GCF_000024845.1|WP_049772333.1 8 1066 evalue:8.5e-213 qcov:99.30 identity:40.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF13620;
pfam_desc Carboxypeptidase regulatory-like domain;
pfam_id CarboxypepD_reg;
pfam_target db:Pfam-A.hmm|PF13620.6 evalue:4.3e-19 score:67.8 best_domain_score:66.1 name:CarboxypepD_reg;
sp YES;
tm_num 1;
69270 69356 signal_peptide
ID metaerg.pl|11621
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
69270 72470 transmembrane_helix
ID metaerg.pl|11622
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology i69306-69374o;
75435 72607 CDS
ID metaerg.pl|11623
allec_ids 4.1.1.31;
allgo_ids GO:0006099; GO:0008964; GO:0015977; GO:0000287; GO:0006107;
allko_ids K01595;
genomedb_OC d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Spirochaetales;f__RBG-16-67-19;g__Fen-1364;s__Fen-1364 sp003141795;
genomedb_acc GCA_003141795.1;
genomedb_target db:genomedb|GCA_003141795.1|PLNO01000037.1_9 6 942 evalue:1.8e-230 qcov:99.50 identity:48.80;
kegg_pathway_id 00620; 00720; 00710;
kegg_pathway_name Pyruvate metabolism; Reductive carboxylate cycle (CO2 fixation); Carbon fixation in photosynthetic organisms;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
metacyc_pathway_id FERMENTATION-PWY; PWY-6142; ANARESP1-PWY; PWYQT-4429; PWY-241; PWY-6549; PWY-6146; PWY-5913; P23-PWY; GLUCONEO-PWY; PWY-1622;
metacyc_pathway_name mixed acid fermentation;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ; CO2 fixation into oxaloacetate (anaplerotic);; C4 photosynthetic carbon assimilation cycle, NADP-ME type;; L-glutamine biosynthesis III;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; partial TCA cycle (obligate autotrophs);; reductive TCA cycle I;; gluconeogenesis I;; formaldehyde assimilation I (serine pathway);;
metacyc_pathway_type Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; Gluconeogenesis; Super-Pathways;; ; CO2-Fixation;; Photosynthesis;; GLUTAMINE-SYN;; Biosynthesis; Super-Pathways;; TCA-VARIANTS;; Reductive-TCA-Cycles;; Gluconeogenesis;; Formaldehyde-Assimilation;;
pfam_acc PF00311;
pfam_desc Phosphoenolpyruvate carboxylase;
pfam_id PEPcase;
pfam_target db:Pfam-A.hmm|PF00311.17 evalue:2.9e-243 score:808.7 best_domain_score:808.5 name:PEPcase;
sprot_desc Phosphoenolpyruvate carboxylase;
sprot_id sp|A7NLR3|CAPP_ROSCS;
sprot_target db:uniprot_sprot|sp|A7NLR3|CAPP_ROSCS 5 942 evalue:1.1e-157 qcov:99.60 identity:38.60;
76813 75443 CDS
ID metaerg.pl|11624
allec_ids 1.2.1.79;
allgo_ids GO:0016491; GO:0055114; GO:0004777; GO:0009013; GO:0009450;
allko_ids K00318; K00135; K00155; K13821; K00294;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__Rhodothermaceae;g__Rhodothermus;s__Rhodothermus marinus;
genomedb_acc GCF_000024845.1;
genomedb_target db:genomedb|GCF_000024845.1|WP_012844500.1 4 453 evalue:1.1e-166 qcov:98.70 identity:66.40;
kegg_pathway_id 00380; 00624; 00281; 00626; 00650; 00350; 00330; 00251; 00903;
kegg_pathway_name Tryptophan metabolism; 1- and 2-Methylnaphthalene degradation; Geraniol degradation; Naphthalene and anthracene degradation; Butanoate metabolism; Tyrosine metabolism; Arginine and proline metabolism; Glutamate metabolism; Limonene and pinene degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:2.2e-138 score:460.8 best_domain_score:460.7 name:Aldedh;
sprot_desc Probable succinate-semialdehyde dehydrogenase [NADP(+)];
sprot_id sp|Q55585|GABD_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55585|GABD_SYNY3 5 454 evalue:9.5e-120 qcov:98.70 identity:48.90;
78991 76904 CDS
ID metaerg.pl|11625
allgo_ids GO:0016021; GO:0031965; GO:0042802; GO:0034220; GO:0009877;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Rhodothermales;f__MEBICO9517;g__MEBICO9517;s__MEBICO9517 sp003285105;
genomedb_acc GCA_003285105.1;
genomedb_target db:genomedb|GCA_003285105.1|CP030158.1_1420 18 677 evalue:2.7e-151 qcov:95.00 identity:47.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
pfam_acc PF06241;
pfam_desc Castor and Pollux, part of voltage-gated ion channel;
pfam_id Castor_Poll_mid;
pfam_target db:Pfam-A.hmm|PF06241.12 evalue:8.2e-15 score:53.9 best_domain_score:45.1 name:Castor_Poll_mid;
sprot_desc Probable ion channel SYM8;
sprot_id sp|Q4VY51|SYM8_PEA;
sprot_target db:uniprot_sprot|sp|Q4VY51|SYM8_PEA 13 668 evalue:7.9e-33 qcov:94.40 identity:23.50;
tm_num 2;
78991 76904 transmembrane_helix
ID metaerg.pl|11626
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
topology i76991-77059o77147-77215i;
79113 79430 CDS
ID metaerg.pl|11627
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002348265;
genomedb_acc GCA_002348265.1;
genomedb_target db:genomedb|GCA_002348265.1|DEAT01000022.1_12 10 106 evalue:8.9e-22 qcov:91.50 identity:59.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
sp YES;
79113 79187 signal_peptide
ID metaerg.pl|11628
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 36.0001; 0.0650858; 34.8418; 0.851602; 0.241587;
>Feature NODE_88_length_79250_cov_15.1207
668 3 CDS
ID metaerg.pl|11629
allko_ids K07282;
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Thermoactinomycetales;f__Thermoactinomycetaceae;g__Laceyella;s__Laceyella sediminis;
genomedb_acc GCF_003003125.1;
genomedb_target db:genomedb|GCF_003003125.1|WP_106342576.1 18 221 evalue:2.4e-29 qcov:91.90 identity:37.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF09587;
pfam_desc Bacterial capsule synthesis protein PGA_cap;
pfam_id PGA_cap;
pfam_target db:Pfam-A.hmm|PF09587.10 evalue:1.6e-35 score:122.1 best_domain_score:121.5 name:PGA_cap;
sprot_desc PGA biosynthesis protein CapA;
sprot_id sp|P96738|CAPA_BACSU;
sprot_target db:uniprot_sprot|sp|P96738|CAPA_BACSU 21 221 evalue:2.1e-24 qcov:90.50 identity:33.50;
tm_num 1;
668 3 transmembrane_helix
ID metaerg.pl|11630
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i99-167o;
1120 665 CDS
ID metaerg.pl|11631
allec_ids 6.3.2.-;
allgo_ids GO:0016020; GO:0045227; GO:0016021; GO:0005886; GO:0009405;
allko_ids K22116;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_D;g__Bacillus_S;s__Bacillus_S marmarensis;
genomedb_acc GCF_000474275.2;
genomedb_target db:genomedb|GCF_000474275.2|WP_022629318.1 1 143 evalue:2.3e-47 qcov:94.70 identity:69.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY-6455;
metacyc_pathway_name vancomycin resistance II;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Vancomycin-Resistnace;;
pfam_acc PF14102;
pfam_desc Capsule biosynthesis CapC;
pfam_id Caps_synth_CapC;
pfam_target db:Pfam-A.hmm|PF14102.6 evalue:2.2e-36 score:124.1 best_domain_score:124.1 name:Caps_synth_CapC;
sprot_desc Capsule biosynthesis protein CapC;
sprot_id sp|P19581|CAPC_BACAN;
sprot_target db:uniprot_sprot|sp|P19581|CAPC_BACAN 1 143 evalue:6.3e-44 qcov:94.70 identity:63.60;
tigrfam_acc TIGR04011;
tigrfam_desc poly-gamma-glutamate biosynthesis protein PgsC;
tigrfam_mainrole Cell envelope;
tigrfam_name poly_gGlu_PgsC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04011 evalue:8e-41 score:138.6 best_domain_score:138.3 name:TIGR04011;
tm_num 4;
1120 665 transmembrane_helix
ID metaerg.pl|11632
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i683-751o779-847i893-961o1046-1114i;
2346 1120 CDS
ID metaerg.pl|11633
allec_ids 6.3.2.-;
allgo_ids GO:0005524; GO:0009058; GO:0016020; GO:0016874; GO:0045227;
allko_ids K01932;
genomedb_OC d__Bacteria;p__Firmicutes_I;c__Bacilli_A;o__Thermoactinomycetales;f__Novibacillaceae;g__Numidum;s__Numidum massiliense;
genomedb_acc GCF_001375555.1;
genomedb_target db:genomedb|GCF_001375555.1|WP_054948668.1 17 397 evalue:5.7e-93 qcov:93.40 identity:46.70;
kegg_pathway_id 00380;
kegg_pathway_name Tryptophan metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY-6455;
metacyc_pathway_name vancomycin resistance II;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Vancomycin-Resistnace;;
pfam_acc PF08245;
pfam_desc Mur ligase middle domain;
pfam_id Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF08245.12 evalue:4.2e-05 score:22.8 best_domain_score:22.2 name:Mur_ligase_M;
sprot_desc PGA synthase CapB;
sprot_id sp|P96736|CAPB_BACSU;
sprot_target db:uniprot_sprot|sp|P96736|CAPB_BACSU 24 402 evalue:2.8e-86 qcov:92.90 identity:42.50;
tigrfam_acc TIGR04012;
tigrfam_desc poly-gamma-glutamate synthase PgsB;
tigrfam_mainrole Cell envelope;
tigrfam_name poly_gGlu_PgsB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04012 evalue:8.8e-116 score:385.9 best_domain_score:385.6 name:TIGR04012;
tm_num 1;
2346 1120 transmembrane_helix
ID metaerg.pl|11634
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology o1147-1206i;
2619 4214 CDS
ID metaerg.pl|11635
allec_ids 2.5.1.26;
allgo_ids GO:0003824; GO:0050660; GO:0005777; GO:0008609; GO:0071949; GO:0016491; GO:0008611;
allko_ids K00004; K00075; K00102;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nanopelagicales;f__S36-B12;g__S36-B12;s__S36-B12 sp002729215;
genomedb_acc GCA_002729215.1;
genomedb_target db:genomedb|GCA_002729215.1|MBR25195.1 51 528 evalue:4.2e-189 qcov:90.00 identity:66.10;
kegg_pathway_id 00620; 00530; 00650;
kegg_pathway_name Pyruvate metabolism; Aminosugars metabolism; Butanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF02913; PF01565;
pfam_desc FAD linked oxidases, C-terminal domain; FAD binding domain;
pfam_id FAD-oxidase_C; FAD_binding_4;
pfam_target db:Pfam-A.hmm|PF02913.19 evalue:1.8e-23 score:82.7 best_domain_score:82.1 name:FAD-oxidase_C; db:Pfam-A.hmm|PF01565.23 evalue:1.1e-36 score:124.8 best_domain_score:123.9 name:FAD_binding_4;
sprot_desc Alkyldihydroxyacetonephosphate synthase;
sprot_id sp|O97157|ADAS_TRYBB;
sprot_target db:uniprot_sprot|sp|O97157|ADAS_TRYBB 103 522 evalue:3.9e-48 qcov:79.10 identity:29.80;
4301 5188 CDS
ID metaerg.pl|11636
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nanopelagicales;f__AcAMD-5;g__ATZT02;s__ATZT02 sp000428345;
genomedb_acc GCA_000428345.2;
genomedb_target db:genomedb|GCA_000428345.2|ATZT02000006.1_6 1 294 evalue:3.0e-128 qcov:99.70 identity:74.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF01261;
pfam_desc Xylose isomerase-like TIM barrel;
pfam_id AP_endonuc_2;
pfam_target db:Pfam-A.hmm|PF01261.24 evalue:1.1e-31 score:109.2 best_domain_score:108.5 name:AP_endonuc_2;
5191 6438 CDS
ID metaerg.pl|11637
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__SBR1031;f__UBA3940;g__UBA3940;s__UBA3940 sp002385675;
genomedb_acc GCA_002385675.1;
genomedb_target db:genomedb|GCA_002385675.1|DGDY01000021.1_3 7 412 evalue:1.7e-137 qcov:97.80 identity:60.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF06792;
pfam_desc Uncharacterised protein family (UPF0261);
pfam_id UPF0261;
pfam_target db:Pfam-A.hmm|PF06792.11 evalue:1.1e-118 score:396.0 best_domain_score:395.8 name:UPF0261;
sprot_desc hypothetical protein;
sprot_id sp|Q893M2|Y1794_CLOTE;
sprot_target db:uniprot_sprot|sp|Q893M2|Y1794_CLOTE 6 403 evalue:2.4e-61 qcov:95.90 identity:34.80;
6435 7352 CDS
ID metaerg.pl|11638
allec_ids 3.7.1.-;
allgo_ids GO:0016811; GO:0046872; GO:0006020; GO:0009231;
allko_ids K01470; K22232;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium;s__Microbacterium sp002703245;
genomedb_acc GCA_002703245.1;
genomedb_target db:genomedb|GCA_002703245.1|MAP62664.1 1 305 evalue:9.7e-146 qcov:100.00 identity:80.70;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY-6550; TOLUENE-DEG-3-OH-PWY; P3-PWY; TOLUENE-DEG-DIOL-PWY; BENZCOA-PWY; PWY-5184; PWY-5641; PWY-5183; P661-PWY; PWY-5180; HCAMHPDEG-PWY; TOLUENE-DEG-2-OH-PWY; PWY-5163; CENTBENZCOA-PWY;
metacyc_pathway_name carbazole degradation;; toluene degradation to 2-hydroxypentadienoate (via 4-methylcatechol);; gallate degradation III (anaerobic);; toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol);; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; 2-nitrotoluene degradation;; superpathway of aerobic toluene degradation;; dibenzo-p-dioxin degradation;; toluene degradation I (aerobic) (via o-cresol);; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; toluene degradation to 2-hydroxypentadienoate I (via o-cresol);; p-cumate degradation to 2-hydroxypentadienoate;; benzoyl-CoA degradation II (anaerobic);;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;; TOLUENE-DEG;; GALLATE-DEG;; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Nitro-Toluene-Degradation;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION;; Super-Pathways; TOLUENE-DEG;; Phenolic-Compounds-Degradation;; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION;; Benzoyl-CoA-Degradation;;
pfam_acc PF02633;
pfam_desc Creatinine amidohydrolase;
pfam_id Creatininase;
pfam_target db:Pfam-A.hmm|PF02633.14 evalue:2.4e-62 score:209.8 best_domain_score:209.5 name:Creatininase;
sprot_desc 3-dehydro-scyllo-inosose hydrolase;
sprot_id sp|Q9WYP4|IOLN_THEMA;
sprot_target db:uniprot_sprot|sp|Q9WYP4|IOLN_THEMA 36 287 evalue:1.7e-16 qcov:82.60 identity:26.80;
7427 8110 CDS
ID metaerg.pl|11639
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Homoserinimonas;s__Homoserinimonas sp003260275;
genomedb_acc GCF_003260275.1;
genomedb_target db:genomedb|GCF_003260275.1|WP_111720978.1 2 213 evalue:6.7e-43 qcov:93.40 identity:46.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF07729; PF00392; PF13412;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family; Winged helix-turn-helix DNA-binding;
pfam_id FCD; GntR; HTH_24;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:9.3e-18 score:64.1 best_domain_score:63.5 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:6.5e-17 score:60.2 best_domain_score:58.7 name:GntR; db:Pfam-A.hmm|PF13412.6 evalue:2.4e-07 score:29.5 best_domain_score:27.2 name:HTH_24;
8211 9266 CDS
ID metaerg.pl|11640
allec_ids 5.1.3.3;
allgo_ids GO:0005975; GO:0016853; GO:0005737; GO:0004034; GO:0030246; GO:0033499; GO:0006006;
allko_ids K01785;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665389.1 5 340 evalue:5.2e-103 qcov:95.70 identity:56.80;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY-6317; PWY66-373; PWY-5114; PWY-2221; NPGLUCAT-PWY;
metacyc_pathway_name D-galactose degradation I (Leloir pathway);; sucrose degradation V (sucrose α-glucosidase);; UDP-sugars interconversion;; Entner-Doudoroff pathway III (semi-phosphorylative);; Entner-Doudoroff pathway II (non-phosphorylative);;
metacyc_pathway_type GALACTOSE-DEGRADATION;; SUCROSE-DEG;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; Entner-Duodoroff-Pathways;; Entner-Duodoroff-Pathways;;
pfam_acc PF01263;
pfam_desc Aldose 1-epimerase;
pfam_id Aldose_epim;
pfam_target db:Pfam-A.hmm|PF01263.20 evalue:1.3e-89 score:299.7 best_domain_score:299.6 name:Aldose_epim;
sprot_desc Aldose 1-epimerase;
sprot_id sp|Q5EA79|GALM_BOVIN;
sprot_target db:uniprot_sprot|sp|Q5EA79|GALM_BOVIN 19 340 evalue:1.7e-84 qcov:91.70 identity:49.50;
9780 9241 CDS
ID metaerg.pl|11641
allgo_ids GO:0048037;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Beutenbergiaceae;g__Serinibacter;s__Serinibacter sp003074035;
genomedb_acc GCF_003074035.1;
genomedb_target db:genomedb|GCF_003074035.1|WP_108719562.1 21 176 evalue:9.0e-67 qcov:87.20 identity:80.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF13380;
pfam_desc CoA binding domain;
pfam_id CoA_binding_2;
pfam_target db:Pfam-A.hmm|PF13380.6 evalue:7.9e-38 score:128.8 best_domain_score:128.5 name:CoA_binding_2;
sprot_desc hypothetical protein;
sprot_id sp|Q45065|YNET_BACSU;
sprot_target db:uniprot_sprot|sp|Q45065|YNET_BACSU 27 156 evalue:4.7e-22 qcov:72.60 identity:41.50;
11114 9777 CDS
ID metaerg.pl|11642
allec_ids 2.5.1.-;
allgo_ids GO:0009058; GO:0030170; GO:0016765; GO:0006520;
allko_ids K01740; K17069;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea carbonis;
genomedb_acc GCF_000767175.1;
genomedb_target db:genomedb|GCF_000767175.1|WP_052425913.1 2 440 evalue:5.1e-212 qcov:98.70 identity:81.80;
kegg_pathway_id 00272; 00271;
kegg_pathway_name Cysteine metabolism; Methionine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY-6520; PWY-5134; PWY-5899; PWY-4502; PWY-5064; PWY-5838; PWY-6403; PWY-5817; PWY-6129; PWY-5864; PWY-5133; PWY-5027; PWY-5893; PWY-6383; POLYISOPRENSYN-PWY; PWY-5783; PWY-5805; PWY-6262; PWY-724; PWY-5861; PWY-6263; PWY-5808; PWY-5897; PWY-5132; PWY-2681; PWY-5068; PWY-5862; PWY-5845; PWY-5896; PWY-5863; PWY-5816; PWY-5898; PWY-5806; PWY-6404; PWY-5135; PWY-5140; PWY-5701;
metacyc_pathway_name nonaprenyl diphosphate biosynthesis II;; superpathway of bitter acids biosynthesis;; superpathway of menaquinol-13 biosynthesis;; wighteone and luteone biosynthesis;; chlorophyll a biosynthesis II;; superpathway of menaquinol-8 biosynthesis I;; carrageenan biosynthesis;; dodecaprenyl diphosphate biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; superpathway of plastoquinol biosynthesis;; colupulone and cohumulone biosynthesis;; phylloquinol biosynthesis;; tridecaprenyl diphosphate biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; polyisoprenoid biosynthesis (E. coli);; octaprenyl diphosphate biosynthesis;; nonaprenyl diphosphate biosynthesis I;; demethylmenaquinol-8 biosynthesis II;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-8 biosynthesis II;; hyperforin and adhyperforin biosynthesis;; superpathway of menaquinol-11 biosynthesis;; lupulone and humulone biosynthesis;; trans-zeatin biosynthesis;; chlorophyll cycle;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of phylloquinol biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of menaquinol-12 biosynthesis;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; xanthohumol biosynthesis;; cannabinoid biosynthesis;; shikonin biosynthesis;;
metacyc_pathway_type Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Chlorophyll-a-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Polysaccharides-Biosynthesis;; Polyprenyl-Biosynthesis;; Lipid-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Demethylmenaquinol-8-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; CYTOKININ-BIOSYNTHESIS;; Chlorophyll-a-Biosynthesis;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; PRENYLFLAVONOID-SYN;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;;
pfam_acc PF00155; PF00266; PF01053; PF01041;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Cys/Met metabolism PLP-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; Aminotran_5; Cys_Met_Meta_PP; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:8.7e-08 score:30.9 best_domain_score:30.2 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:2.1e-07 score:29.5 best_domain_score:28.8 name:Aminotran_5; db:Pfam-A.hmm|PF01053.20 evalue:2.5e-126 score:420.5 best_domain_score:420.3 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF01041.17 evalue:6.3e-09 score:34.8 best_domain_score:34.2 name:DegT_DnrJ_EryC1;
sprot_desc Sulfhydrylase FUB7;
sprot_id sp|A0A0D2YG02|FUB7_FUSO4;
sprot_target db:uniprot_sprot|sp|A0A0D2YG02|FUB7_FUSO4 8 433 evalue:1.5e-117 qcov:95.70 identity:50.60;
tigrfam_acc TIGR01326;
tigrfam_desc O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name OAH_OAS_sulfhy;
tigrfam_sub1role Serine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01326 evalue:6.6e-174 score:577.6 best_domain_score:577.4 name:TIGR01326;
12080 11163 CDS
ID metaerg.pl|11643
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0042959; GO:0042918;
allko_ids K02050; K15554;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Promicromonospora;s__Promicromonospora sukumoe_B;
genomedb_acc GCF_000385135.1;
genomedb_target db:genomedb|GCF_000385135.1|WP_020017437.1 50 304 evalue:9.5e-93 qcov:83.60 identity:73.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.9e-21 score:74.5 best_domain_score:74.5 name:BPD_transp_1;
sprot_desc Putative aliphatic sulfonates transport permease protein SsuC;
sprot_id sp|P40401|SSUC_BACSU;
sprot_target db:uniprot_sprot|sp|P40401|SSUC_BACSU 36 302 evalue:7.5e-44 qcov:87.50 identity:38.30;
tm_num 7;
12080 11163 transmembrane_helix
ID metaerg.pl|11644
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i11346-11414o11514-11582i11616-11684o11697-11756i11817-11885o11895-11954i11988-12047o;
13090 12077 CDS
ID metaerg.pl|11645
allgo_ids GO:0022857; GO:0043190; GO:0055085;
allko_ids K02051;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Beutenbergiaceae;g__Beutenbergia;s__Beutenbergia cavernae;
genomedb_acc GCF_000023105.1;
genomedb_target db:genomedb|GCF_000023105.1|WP_015883918.1 1 335 evalue:6.5e-119 qcov:99.40 identity:67.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF09084; PF13379; PF04069; PF12974;
pfam_desc NMT1/THI5 like; NMT1-like family; Substrate binding domain of ABC-type glycine betaine transport system; ABC transporter, phosphonate, periplasmic substrate-binding protein;
pfam_id NMT1; NMT1_2; OpuAC; Phosphonate-bd;
pfam_target db:Pfam-A.hmm|PF09084.11 evalue:7.7e-27 score:93.9 best_domain_score:93.1 name:NMT1; db:Pfam-A.hmm|PF13379.6 evalue:1.7e-11 score:43.6 best_domain_score:41.0 name:NMT1_2; db:Pfam-A.hmm|PF04069.12 evalue:1.6e-05 score:23.9 best_domain_score:13.6 name:OpuAC; db:Pfam-A.hmm|PF12974.7 evalue:1.3e-08 score:33.9 best_domain_score:33.4 name:Phosphonate-bd;
sp YES;
tigrfam_acc TIGR01728;
tigrfam_desc ABC transporter, substrate-binding protein, aliphatic sulfonates family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name SsuA_fam;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01728 evalue:4.2e-63 score:212.4 best_domain_score:212.0 name:TIGR01728;
tm_num 1;
12077 12151 lipoprotein_signal_peptide
ID metaerg.pl|11646
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
13090 12077 transmembrane_helix
ID metaerg.pl|11647
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i12095-12163o;
13992 13087 CDS
ID metaerg.pl|11648
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0008509;
allko_ids K11072; K02068; K02045; K02062; K02071; K06861; K01996; K02032; K02017; K11084; K02052; K02006; K02010; K05847; K02000; K02023; K10243; K01990; K11076; K05816; K10112; K01998; K10111; K02049; K02065; K01995; K15555;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea bogoriensis;
genomedb_acc GCF_000767165.1;
genomedb_target db:genomedb|GCF_000767165.1|WP_052104979.1 1 271 evalue:2.2e-102 qcov:90.00 identity:72.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY-6166; PWY-6188; PWY-6171; PWY-6135; PWY-6113; PWYG-321;
metacyc_pathway_name ; ; ; ; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:1.9e-28 score:98.9 best_domain_score:97.8 name:ABC_tran;
sprot_desc Aliphatic sulfonates import ATP-binding protein SsuB 2;
sprot_id sp|Q39LW7|SSUB2_BURL3;
sprot_target db:uniprot_sprot|sp|Q39LW7|SSUB2_BURL3 32 271 evalue:3.6e-51 qcov:79.70 identity:50.00;
14213 14848 CDS
ID metaerg.pl|11649
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441982.1 6 193 evalue:1.9e-63 qcov:89.10 identity:70.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF17932; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_24; TetR_N;
pfam_target db:Pfam-A.hmm|PF17932.1 evalue:2.6e-20 score:72.0 best_domain_score:71.6 name:TetR_C_24; db:Pfam-A.hmm|PF00440.23 evalue:9e-14 score:50.3 best_domain_score:49.4 name:TetR_N;
14899 16779 CDS
ID metaerg.pl|11650
allgo_ids GO:0000155; GO:0007165;
allko_ids K07718; K07698; K07651; K11623; K07648; K07679; K02478; K13533; K11328; K07711; K00873; K08884; K11633; K07768; K02575; K07778; K11354; K07683; K07652; K08475; K07639; K07673; K07641; K13598; K07646; K07637; K03407; K00936; K07649; K07682; K07777; K07654; K01090; K02491; K11231; K07643; K08282; K07704; K10909; K07708; K07677; K07645; K04486; K11640; K11356; K02484; K07642; K11711; K10715; K07678; K02030; K11527; K13587; K07636; K07638; K07653; K02480; K08801; K02482; K14489; K07656; K01768; K07640; K07710; K07716; K07697; K02489; K10916; K08479; K07674; K03388; K02668; K07675; K07717; K13040; K10942; K07647; K07680; K02342; K11629; K10125; K11357; K11617; K04757; K11520; K14509; K07769; K12767; K02486; K11383; K07644; K07709; K13532; K06379; K10681; K07676; K07650; K01769;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_F;s__Pseudomonas_F furukawaii;
genomedb_acc GCF_002355475.1;
genomedb_target db:genomedb|GCF_002355475.1|WP_003449886.1 27 620 evalue:4.5e-81 qcov:94.90 identity:34.90;
kegg_pathway_id 00790; 00340; 04011; 02020; 03090; 00620; 05111; 00230; 03030; 00710; 00010;
kegg_pathway_name Folate biosynthesis; Histidine metabolism; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; DNA replication; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF02518; PF00512; PF00989; PF08447; PF08448; PF13188; PF13426;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain;
pfam_id HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_8; PAS_9;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:6.9e-19 score:67.6 best_domain_score:66.5 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.1e-14 score:53.4 best_domain_score:51.6 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:1.1e-20 score:72.9 best_domain_score:26.4 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:1.5e-22 score:78.9 best_domain_score:51.6 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:3.1e-26 score:91.0 best_domain_score:45.2 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:1.1e-12 score:46.9 best_domain_score:22.6 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:3.5e-13 score:48.9 best_domain_score:17.6 name:PAS_9;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:5.8e-25 score:87.0 best_domain_score:43.9 name:TIGR00229;
18849 16798 CDS
ID metaerg.pl|11651
allec_ids 3.3.2.12; 1.2.1.91;
allgo_ids GO:0016491; GO:0055114; GO:0004300; GO:0016803; GO:0016823; GO:0016726; GO:0016620; GO:0010124;
allko_ids K02618;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__MedAcidi-G1;g__UBA9410;s__UBA9410 sp002717365;
genomedb_acc GCA_002717365.1;
genomedb_target db:genomedb|GCA_002717365.1|MBI02527.1 4 672 evalue:3.5e-204 qcov:98.00 identity:55.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00171; PF01575; PF13452;
pfam_desc Aldehyde dehydrogenase family; MaoC like domain; N-terminal half of MaoC dehydratase;
pfam_id Aldedh; MaoC_dehydratas; MaoC_dehydrat_N;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:1.7e-63 score:214.0 best_domain_score:213.3 name:Aldedh; db:Pfam-A.hmm|PF01575.19 evalue:2.9e-23 score:81.0 best_domain_score:80.2 name:MaoC_dehydratas; db:Pfam-A.hmm|PF13452.6 evalue:3.1e-07 score:29.8 best_domain_score:28.1 name:MaoC_dehydrat_N;
sprot_desc Bifunctional protein PaaZ;
sprot_id sp|P77455|PAAZ_ECOLI;
sprot_target db:uniprot_sprot|sp|P77455|PAAZ_ECOLI 5 674 evalue:5.0e-165 qcov:98.10 identity:47.70;
tigrfam_acc TIGR02278;
tigrfam_desc phenylacetic acid degradation protein paaN;
tigrfam_name PaaN-DH;
tigrfam_target db:TIGRFAMs.hmm|TIGR02278 evalue:2.7e-273 score:907.3 best_domain_score:907.1 name:TIGR02278;
19454 18888 CDS
ID metaerg.pl|11652
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052670055.1 14 181 evalue:4.9e-55 qcov:89.40 identity:66.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF01883;
pfam_desc Iron-sulfur cluster assembly protein;
pfam_id FeS_assembly_P;
pfam_target db:Pfam-A.hmm|PF01883.19 evalue:5.5e-16 score:57.7 best_domain_score:57.1 name:FeS_assembly_P;
tigrfam_acc TIGR02159;
tigrfam_desc phenylacetate-CoA oxygenase, PaaJ subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name PA_CoA_Oxy4;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02159 evalue:3e-43 score:146.8 best_domain_score:145.9 name:TIGR02159;
20302 19451 CDS
ID metaerg.pl|11653
allgo_ids GO:0010124;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441981.1 10 283 evalue:2.3e-85 qcov:96.80 identity:59.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF05138;
pfam_desc Phenylacetic acid catabolic protein;
pfam_id PaaA_PaaC;
pfam_target db:Pfam-A.hmm|PF05138.12 evalue:1.2e-44 score:151.6 best_domain_score:151.5 name:PaaA_PaaC;
tigrfam_acc TIGR02158;
tigrfam_desc phenylacetate-CoA oxygenase, PaaI subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name PA_CoA_Oxy3;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02158 evalue:2e-42 score:144.8 best_domain_score:140.9 name:TIGR02158;
20643 20299 CDS
ID metaerg.pl|11654
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668865.1 1 107 evalue:1.7e-31 qcov:93.90 identity:64.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF06243;
pfam_desc Phenylacetic acid degradation B;
pfam_id PaaB;
pfam_target db:Pfam-A.hmm|PF06243.11 evalue:2.3e-15 score:55.8 best_domain_score:55.5 name:PaaB;
21716 20688 CDS
ID metaerg.pl|11655
allec_ids 1.14.13.149;
allgo_ids GO:0010124; GO:0097266;
allko_ids K02609;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668864.1 39 342 evalue:1.3e-146 qcov:88.90 identity:80.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF05138;
pfam_desc Phenylacetic acid catabolic protein;
pfam_id PaaA_PaaC;
pfam_target db:Pfam-A.hmm|PF05138.12 evalue:4.9e-75 score:251.3 best_domain_score:251.0 name:PaaA_PaaC;
sprot_desc 1,2-phenylacetyl-CoA epoxidase, subunit A;
sprot_id sp|P76077|PAAA_ECOLI;
sprot_target db:uniprot_sprot|sp|P76077|PAAA_ECOLI 44 335 evalue:3.3e-64 qcov:85.40 identity:42.50;
22816 21827 CDS
ID metaerg.pl|11656
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio;s__Thioalkalivibrio sp000025545;
genomedb_acc GCF_000025545.1;
genomedb_target db:genomedb|GCF_000025545.1|WP_026148110.1 1 328 evalue:1.8e-57 qcov:99.70 identity:42.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF04235;
pfam_desc Protein of unknown function (DUF418);
pfam_id DUF418;
pfam_target db:Pfam-A.hmm|PF04235.12 evalue:5.7e-07 score:28.8 best_domain_score:28.8 name:DUF418;
tm_num 9;
22816 21827 transmembrane_helix
ID metaerg.pl|11657
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology o21902-21955i21992-22045o22058-22117i22130-22198o22262-22330i22367-22435o22493-22561i22580-22648o22691-22759i;
23105 24928 CDS
ID metaerg.pl|11658
allec_ids 2.3.2.-;
allgo_ids GO:0008233; GO:0016740; GO:0045227; GO:0009405;
allko_ids K00681;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea bogoriensis;
genomedb_acc GCF_000767165.1;
genomedb_target db:genomedb|GCF_000767165.1|WP_035058014.1 118 607 evalue:5.3e-135 qcov:80.70 identity:54.10;
kegg_pathway_id 00590; 00450; 00480; 00430; 00460;
kegg_pathway_name Arachidonic acid metabolism; Selenoamino acid metabolism; Glutathione metabolism; Taurine and hypotaurine metabolism; Cyanoamino acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY-6463; PWY-6462;
metacyc_pathway_name peptidoglycan cross-bridge biosynthesis IV (Weissella viridescens);; peptidoglycan cross-bridge biosynthesis III (Enterococcus faecalis);;
metacyc_pathway_type Peptidoglycan-Cross-Bridge-Biosynthesis;; Peptidoglycan-Cross-Bridge-Biosynthesis;;
pfam_acc PF01019;
pfam_desc Gamma-glutamyltranspeptidase;
pfam_id G_glu_transpept;
pfam_target db:Pfam-A.hmm|PF01019.21 evalue:2.7e-98 score:329.2 best_domain_score:325.9 name:G_glu_transpept;
sp YES;
sprot_desc Capsule biosynthesis protein CapD proenzyme;
sprot_id sp|Q51693|CAPD_BACAN;
sprot_target db:uniprot_sprot|sp|Q51693|CAPD_BACAN 110 603 evalue:1.9e-67 qcov:81.40 identity:33.60;
tm_num 1;
23105 23218 lipoprotein_signal_peptide
ID metaerg.pl|11659
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
23105 24928 transmembrane_helix
ID metaerg.pl|11660
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i23165-23218o;
25854 24820 CDS
ID metaerg.pl|11661
allgo_ids GO:0005886; GO:0071281;
allko_ids K02016;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Mor1;o__Gp22-AA2;f__Gp22-AA2;g__Gp22-AA3;s__Gp22-AA3 sp003223135;
genomedb_acc GCA_003223135.1;
genomedb_target db:genomedb|GCA_003223135.1|PYT37388.1 1 304 evalue:1.1e-92 qcov:88.40 identity:58.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF01497;
pfam_desc Periplasmic binding protein;
pfam_id Peripla_BP_2;
pfam_target db:Pfam-A.hmm|PF01497.18 evalue:1.5e-22 score:79.6 best_domain_score:79.0 name:Peripla_BP_2;
sp YES;
sprot_desc Uncharacterized ABC transporter substrate-binding lipoprotein YvrC;
sprot_id sp|O34805|YVRC_BACSU;
sprot_target db:uniprot_sprot|sp|O34805|YVRC_BACSU 7 292 evalue:1.1e-11 qcov:83.10 identity:26.90;
24820 24888 lipoprotein_signal_peptide
ID metaerg.pl|11662
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
26040 28532 CDS
ID metaerg.pl|11663
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA4744;g__UBA4744;s__UBA4744 sp002403855;
genomedb_acc GCA_002403855.1;
genomedb_target db:genomedb|GCA_002403855.1|DHIO01000052.1_23 8 822 evalue:5.3e-162 qcov:98.20 identity:44.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF03176; PF02460; PF12349;
pfam_desc MMPL family; Patched family; Sterol-sensing domain of SREBP cleavage-activation;
pfam_id MMPL; Patched; Sterol-sensing;
pfam_target db:Pfam-A.hmm|PF03176.15 evalue:4.7e-26 score:90.7 best_domain_score:60.0 name:MMPL; db:Pfam-A.hmm|PF02460.18 evalue:5.9e-10 score:37.1 best_domain_score:21.0 name:Patched; db:Pfam-A.hmm|PF12349.8 evalue:3.1e-07 score:29.6 best_domain_score:16.5 name:Sterol-sensing;
sp YES;
tm_num 12;
26040 26150 signal_peptide
ID metaerg.pl|11664
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
26040 28532 transmembrane_helix
ID metaerg.pl|11665
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i26088-26156o26718-26786i26835-26903o26946-27005i27063-27131o27159-27227i27348-27416o27990-28058i28071-28139o28167-28235i28296-28355o28383-28451i;
29211 28543 CDS
ID metaerg.pl|11666
allgo_ids GO:0006355; GO:0005737; GO:0003677; GO:0000160;
allko_ids K07778; K07648; K03407; K07654; K07682; K07652; K07646; K07641; K07673; K07677; K11231; K07642; K02484; K07653; K07636; K02482; K02480; K10715; K07674; K10916; K02668; K03388; K07710; K02489; K07716; K04757; K11357; K10125; K02486; K12767; K07675; K07647; K07676; K07644; K02479;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Kitasatospora;s__Kitasatospora rubellomurinus;
genomedb_acc GCF_000961885.1;
genomedb_target db:genomedb|GCF_000961885.1|WP_045697526.1 2 220 evalue:2.7e-65 qcov:98.60 identity:62.60;
kegg_pathway_id 04011; 02020; 03090; 05111; 00790;
kegg_pathway_name MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Vibrio cholerae pathogenic cycle; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00196; PF00072;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain;
pfam_id GerE; Response_reg;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:3e-19 score:67.6 best_domain_score:66.3 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:2e-28 score:98.0 best_domain_score:97.2 name:Response_reg;
sprot_desc Uncharacterized transcriptional regulatory protein YxjL;
sprot_id sp|P55184|YXJL_BACSU;
sprot_target db:uniprot_sprot|sp|P55184|YXJL_BACSU 2 218 evalue:6.9e-39 qcov:97.70 identity:41.30;
30614 29208 CDS
ID metaerg.pl|11667
allgo_ids GO:0000155; GO:0000160; GO:0016021; GO:0046983;
allko_ids K07683; K07778; K11623; K07777; K07682; K07641; K07673; K07704; K08282; K02484; K08801; K02480; K02668; K07674; K01768; K02486; K04757; K11617; K07680; K07675; K06379;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108668366.1 52 467 evalue:1.7e-72 qcov:88.90 identity:46.10;
kegg_pathway_id 00230; 03090; 02020;
kegg_pathway_name Purine metabolism; Type II secretion system; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF07730;
pfam_desc Histidine kinase;
pfam_id HisKA_3;
pfam_target db:Pfam-A.hmm|PF07730.13 evalue:2.7e-17 score:62.3 best_domain_score:62.3 name:HisKA_3;
tm_num 4;
30614 29208 transmembrane_helix
ID metaerg.pl|11668
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i29415-29483o29613-29681i29718-29771o29814-29882i;
30649 31554 CDS
ID metaerg.pl|11669
allgo_ids GO:0005524; GO:0005886; GO:0016887;
allko_ids K10111; K01995; K02023; K01990; K02052; K02006; K02010; K05847; K02017; K06861; K01996; K11072; K02045;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA4744;g__UBA4744;s__UBA4744 sp002403855;
genomedb_acc GCA_002403855.1;
genomedb_target db:genomedb|GCA_002403855.1|DHIO01000019.1_30 1 299 evalue:8.0e-92 qcov:99.30 identity:57.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF13304; PF00005; PF13732;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; Domain of unknown function (DUF4162);
pfam_id AAA_21; ABC_tran; DUF4162;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:9.3e-10 score:38.0 best_domain_score:23.5 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:6.3e-26 score:90.8 best_domain_score:90.3 name:ABC_tran; db:Pfam-A.hmm|PF13732.6 evalue:8.6e-07 score:28.8 best_domain_score:28.2 name:DUF4162;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YhaQ;
sprot_id sp|C0SPB4|YHAQ_BACSU;
sprot_target db:uniprot_sprot|sp|C0SPB4|YHAQ_BACSU 1 299 evalue:9.3e-55 qcov:99.30 identity:36.80;
31551 32735 CDS
ID metaerg.pl|11670
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665024.1 1 387 evalue:1.8e-51 qcov:98.20 identity:39.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF12698;
pfam_desc ABC-2 family transporter protein;
pfam_id ABC2_membrane_3;
pfam_target db:Pfam-A.hmm|PF12698.7 evalue:3.6e-29 score:101.2 best_domain_score:100.7 name:ABC2_membrane_3;
tm_num 6;
31551 32735 transmembrane_helix
ID metaerg.pl|11671
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i31617-31685o32052-32120i32214-32282o32340-32408i32427-32495o32598-32666i;
33155 32724 CDS
ID metaerg.pl|11672
allko_ids K00974; K05847; K00088; K00031; K11527; K01697;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441980.1 11 128 evalue:1.9e-27 qcov:82.50 identity:63.60;
kegg_pathway_id 00983; 00720; 00480; 00271; 00020; 00230; 00260; 02010; 00450;
kegg_pathway_name Drug metabolism - other enzymes; Reductive carboxylate cycle (CO2 fixation); Glutathione metabolism; Methionine metabolism; Citrate cycle (TCA cycle); Purine metabolism; Glycine, serine and threonine metabolism; ABC transporters - General; Selenoamino acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00571;
pfam_desc CBS domain;
pfam_id CBS;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:1.5e-14 score:53.4 best_domain_score:31.8 name:CBS;
33965 33291 CDS
ID metaerg.pl|11673
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668475.1 1 200 evalue:6.2e-65 qcov:89.30 identity:67.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF03703;
pfam_desc Bacterial PH domain;
pfam_id bPH_2;
pfam_target db:Pfam-A.hmm|PF03703.14 evalue:3.9e-17 score:61.4 best_domain_score:60.5 name:bPH_2;
tm_num 2;
33965 33291 transmembrane_helix
ID metaerg.pl|11674
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i33351-33419o33447-33515i;
34208 34636 CDS
ID metaerg.pl|11675
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442289.1 4 142 evalue:2.2e-36 qcov:97.90 identity:59.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:5.3e-33 score:113.7 best_domain_score:113.6 name:Usp;
34804 35508 CDS
ID metaerg.pl|11676
genomedb_OC d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Sorangium;s__Sorangium cellulosum_E;
genomedb_acc GCF_002950945.1;
genomedb_target db:genomedb|GCF_002950945.1|WP_104986094.1 4 232 evalue:5.1e-38 qcov:97.90 identity:44.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF12695;
pfam_desc Alpha/beta hydrolase family;
pfam_id Abhydrolase_5;
pfam_target db:Pfam-A.hmm|PF12695.7 evalue:5.4e-07 score:28.8 best_domain_score:26.8 name:Abhydrolase_5;
35598 36035 CDS
ID metaerg.pl|11677
allgo_ids GO:0005887; GO:0008381; GO:0034220;
allko_ids K03282;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441897.1 4 120 evalue:2.2e-31 qcov:80.70 identity:60.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF01741;
pfam_desc Large-conductance mechanosensitive channel, MscL;
pfam_id MscL;
pfam_target db:Pfam-A.hmm|PF01741.18 evalue:4e-32 score:110.3 best_domain_score:110.1 name:MscL;
sprot_desc Large-conductance mechanosensitive channel;
sprot_id sp|B2FSD7|MSCL_STRMK;
sprot_target db:uniprot_sprot|sp|B2FSD7|MSCL_STRMK 1 118 evalue:1.6e-20 qcov:81.40 identity:44.70;
tigrfam_acc TIGR00220;
tigrfam_desc large conductance mechanosensitive channel protein;
tigrfam_mainrole Cellular processes;
tigrfam_name mscL;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00220 evalue:1.5e-27 score:95.4 best_domain_score:95.2 name:TIGR00220;
tm_num 2;
35598 36035 transmembrane_helix
ID metaerg.pl|11678
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i35634-35702o35784-35852i;
36225 38240 CDS
ID metaerg.pl|11679
allec_ids 2.2.1.1;
allgo_ids GO:0046872; GO:0004802;
allko_ids K00615; K00163;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442291.1 18 668 evalue:2.9e-291 qcov:97.00 identity:76.80;
kegg_pathway_id 00650; 01051; 00252; 00620; 00020; 00030; 00010; 00710; 00290;
kegg_pathway_name Butanoate metabolism; Biosynthesis of ansamycins; Alanine and aspartate metabolism; Pyruvate metabolism; Citrate cycle (TCA cycle); Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Valine, leucine and isoleucine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY-1861; P124-PWY; NONOXIPENT-PWY; PWY-5979; P185-PWY; PWY-5723; PHOTOALL-PWY; PWY-5993; CALVIN-PWY; PENTOSE-P-PWY; P21-PWY;
metacyc_pathway_name formaldehyde assimilation II (assimilatory RuMP Cycle);; Bifidobacterium shunt;; pentose phosphate pathway (non-oxidative branch);; 3-amino-5-hydroxybenzoate biosynthesis;; formaldehyde assimilation III (dihydroxyacetone cycle);; Rubisco shunt;; oxygenic photosynthesis;; superpathway of rifamycin B biosynthesis;; Calvin-Benson-Bassham cycle;; pentose phosphate pathway;; pentose phosphate pathway (partial);;
metacyc_pathway_type Formaldehyde-Assimilation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Pentose-Phosphate-Cycle;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Formaldehyde-Assimilation;; Energy-Metabolism;; Photosynthesis; Super-Pathways;; Antibiotic-Biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; Pentose-Phosphate-Cycle; Super-Pathways;; Pentose-Phosphate-Cycle;;
pfam_acc PF02780; PF00456; PF02779;
pfam_desc Transketolase, C-terminal domain; Transketolase, thiamine diphosphate binding domain; Transketolase, pyrimidine binding domain;
pfam_id Transketolase_C; Transketolase_N; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF02780.20 evalue:8.1e-13 score:47.6 best_domain_score:46.5 name:Transketolase_C; db:Pfam-A.hmm|PF00456.21 evalue:9.2e-140 score:464.6 best_domain_score:464.2 name:Transketolase_N; db:Pfam-A.hmm|PF02779.24 evalue:2.2e-46 score:157.0 best_domain_score:155.9 name:Transket_pyr;
sprot_desc Transketolase;
sprot_id sp|Q9KAD7|TKT_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KAD7|TKT_BACHD 1 664 evalue:8.6e-202 qcov:99.00 identity:53.90;
tigrfam_acc TIGR00232;
tigrfam_desc transketolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tktlase_bact;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00232 evalue:5.3e-254 score:843.6 best_domain_score:843.4 name:TIGR00232;
38884 38291 CDS
ID metaerg.pl|11680
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
tm_num 2;
38884 38291 transmembrane_helix
ID metaerg.pl|11681
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i38462-38521o38531-38590i;
39038 39490 CDS
ID metaerg.pl|11682
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nanopelagicales;f__GCA-2699445;g__GCA-2699445;s__GCA-2699445 sp002699445;
genomedb_acc GCA_002699445.1;
genomedb_target db:genomedb|GCA_002699445.1|MAT60501.1 1 150 evalue:1.2e-53 qcov:100.00 identity:62.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF04248;
pfam_desc Domain of unknown function (DUF427);
pfam_id NTP_transf_9;
pfam_target db:Pfam-A.hmm|PF04248.12 evalue:2.9e-29 score:100.0 best_domain_score:98.2 name:NTP_transf_9;
39579 40013 CDS
ID metaerg.pl|11683
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668482.1 1 140 evalue:3.6e-34 qcov:97.20 identity:67.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF03992;
pfam_desc Antibiotic biosynthesis monooxygenase;
pfam_id ABM;
pfam_target db:Pfam-A.hmm|PF03992.16 evalue:5.1e-20 score:70.6 best_domain_score:70.2 name:ABM;
40101 41219 CDS
ID metaerg.pl|11684
allgo_ids GO:0006415; GO:0005737; GO:0016149;
allko_ids K02836;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668484.1 1 372 evalue:1.7e-152 qcov:100.00 identity:74.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF03462; PF00472;
pfam_desc PCRF domain; RF-1 domain;
pfam_id PCRF; RF-1;
pfam_target db:Pfam-A.hmm|PF03462.18 evalue:4.6e-51 score:172.7 best_domain_score:171.9 name:PCRF; db:Pfam-A.hmm|PF00472.20 evalue:3.5e-35 score:119.7 best_domain_score:118.8 name:RF-1;
sprot_desc Peptide chain release factor 2;
sprot_id sp|A0QU58|RF2_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QU58|RF2_MYCS2 1 367 evalue:9.9e-107 qcov:98.70 identity:55.00;
tigrfam_acc TIGR00020;
tigrfam_desc peptide chain release factor 2;
tigrfam_mainrole Protein synthesis;
tigrfam_name prfB;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00020 evalue:1.2e-137 score:457.9 best_domain_score:457.7 name:TIGR00020;
41503 42201 CDS
ID metaerg.pl|11685
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0007049; GO:0051301;
allko_ids K06857; K05816; K11076; K02049; K01995; K02065; K10111; K01998; K10112; K02031; K02000; K11962; K09812; K01990; K10243; K02023; K11084; K02032; K02017; K02010; K05847; K01997; K02003; K02004; K02052; K02006; K02045; K11072; K02068; K06861; K02071; K01996; K09811;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442292.1 1 230 evalue:8.2e-113 qcov:99.10 identity:90.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:7.8e-10 score:38.3 best_domain_score:22.8 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.1e-35 score:122.4 best_domain_score:122.0 name:ABC_tran;
sprot_desc Cell division ATP-binding protein FtsE;
sprot_id sp|A5U7B7|FTSE_MYCTA;
sprot_target db:uniprot_sprot|sp|A5U7B7|FTSE_MYCTA 1 229 evalue:1.1e-74 qcov:98.70 identity:63.30;
tigrfam_acc TIGR02673;
tigrfam_desc cell division ATP-binding protein FtsE;
tigrfam_mainrole Cellular processes;
tigrfam_name FtsE;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR02673 evalue:3.4e-84 score:281.0 best_domain_score:280.8 name:TIGR02673;
42270 43163 CDS
ID metaerg.pl|11686
allgo_ids GO:0016021; GO:0005886; GO:0007049; GO:0051301;
allko_ids K02004; K09811;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668486.1 1 297 evalue:1.2e-103 qcov:100.00 identity:66.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF18075;
pfam_desc FtsX extracellular domain;
pfam_id FtsX_ECD;
pfam_target db:Pfam-A.hmm|PF18075.1 evalue:1.6e-26 score:92.0 best_domain_score:91.3 name:FtsX_ECD;
sprot_desc Cell division protein FtsX;
sprot_id sp|O32882|FTSX_MYCLE;
sprot_target db:uniprot_sprot|sp|O32882|FTSX_MYCLE 4 295 evalue:4.0e-34 qcov:98.30 identity:31.80;
tm_num 4;
42270 43163 transmembrane_helix
ID metaerg.pl|11687
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i42327-42395o42801-42869i42930-42998o43074-43142i;
43362 44939 CDS
ID metaerg.pl|11688
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruminococcus_C;s__Ruminococcus_C callidus;
genomedb_acc GCF_000468015.1;
genomedb_target db:genomedb|GCF_000468015.1|WP_021680640.1 14 523 evalue:2.2e-20 qcov:97.10 identity:28.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:1.6e-28 score:98.0 best_domain_score:97.8 name:Peptidase_M23;
sp YES;
43362 43415 signal_peptide
ID metaerg.pl|11689
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
44991 45476 CDS
ID metaerg.pl|11690
allgo_ids GO:0003723; GO:0005737; GO:0070929;
allko_ids K03664;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668488.1 4 160 evalue:9.9e-57 qcov:97.50 identity:71.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF01668;
pfam_desc SmpB protein;
pfam_id SmpB;
pfam_target db:Pfam-A.hmm|PF01668.18 evalue:3.7e-56 score:188.2 best_domain_score:188.1 name:SmpB;
sprot_desc SsrA-binding protein;
sprot_id sp|Q47M13|SSRP_THEFY;
sprot_target db:uniprot_sprot|sp|Q47M13|SSRP_THEFY 1 161 evalue:7.4e-43 qcov:100.00 identity:59.00;
tigrfam_acc TIGR00086;
tigrfam_desc SsrA-binding protein;
tigrfam_mainrole Protein synthesis;
tigrfam_name smpB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00086 evalue:6.3e-52 score:174.6 best_domain_score:174.4 name:TIGR00086;
46566 46375 CDS
ID metaerg.pl|11691
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya tangerina;
genomedb_acc GCA_003074135.1;
genomedb_target db:genomedb|GCA_003074135.1|PPDK01000001.1_2308 6 61 evalue:1.0e-12 qcov:88.90 identity:62.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF04024;
pfam_desc PspC domain;
pfam_id PspC;
pfam_target db:Pfam-A.hmm|PF04024.12 evalue:1.3e-16 score:59.3 best_domain_score:59.2 name:PspC;
tm_num 2;
46566 46375 transmembrane_helix
ID metaerg.pl|11692
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i46408-46476o46486-46554i;
48408 46741 CDS
ID metaerg.pl|11693
allgo_ids GO:0003676; GO:0004519;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665294.1 41 530 evalue:2.5e-139 qcov:88.30 identity:58.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF01844;
pfam_desc HNH endonuclease;
pfam_id HNH;
pfam_target db:Pfam-A.hmm|PF01844.23 evalue:1.6e-05 score:24.2 best_domain_score:23.5 name:HNH;
48790 50505 CDS
ID metaerg.pl|11694
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus;s__Geodermatophilus sabuli;
genomedb_acc GCF_900215145.1;
genomedb_target db:genomedb|GCF_900215145.1|WP_097209100.1 1 566 evalue:8.3e-199 qcov:99.10 identity:63.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF10081; PF15420;
pfam_desc Alpha/beta-hydrolase family; Alpha/beta-hydrolase family N-terminus;
pfam_id Abhydrolase_9; Abhydrolase_9_N;
pfam_target db:Pfam-A.hmm|PF10081.9 evalue:4.4e-125 score:415.7 best_domain_score:415.4 name:Abhydrolase_9; db:Pfam-A.hmm|PF15420.6 evalue:5.7e-63 score:211.9 best_domain_score:211.4 name:Abhydrolase_9_N;
tm_num 5;
48790 50505 transmembrane_helix
ID metaerg.pl|11695
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i48886-48954o48982-49050i49084-49152o49195-49263i49339-49407o;
51598 50576 CDS
ID metaerg.pl|11696
allgo_ids GO:0003677; GO:0006355;
allko_ids K02529;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441244.1 9 339 evalue:6.0e-104 qcov:97.40 identity:60.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00356; PF00532; PF13377; PF13407;
pfam_desc Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of LacI family; Periplasmic binding protein-like domain; Periplasmic binding protein domain;
pfam_id LacI; Peripla_BP_1; Peripla_BP_3; Peripla_BP_4;
pfam_target db:Pfam-A.hmm|PF00356.21 evalue:1.5e-15 score:56.0 best_domain_score:55.2 name:LacI; db:Pfam-A.hmm|PF00532.21 evalue:4.9e-28 score:97.6 best_domain_score:97.1 name:Peripla_BP_1; db:Pfam-A.hmm|PF13377.6 evalue:4e-28 score:98.1 best_domain_score:97.7 name:Peripla_BP_3; db:Pfam-A.hmm|PF13407.6 evalue:5e-22 score:77.9 best_domain_score:77.3 name:Peripla_BP_4;
sprot_desc HTH-type transcriptional regulator GalS;
sprot_id sp|P25748|GALS_ECOLI;
sprot_target db:uniprot_sprot|sp|P25748|GALS_ECOLI 13 330 evalue:7.3e-32 qcov:93.50 identity:31.10;
51798 53114 CDS
ID metaerg.pl|11697
allgo_ids GO:0042597; GO:0008643;
allko_ids K10232;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669042.1 4 438 evalue:3.5e-120 qcov:99.30 identity:51.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF01547; PF13531; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_11; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:1e-24 score:87.3 best_domain_score:86.6 name:SBP_bac_1; db:Pfam-A.hmm|PF13531.6 evalue:3.1e-06 score:26.3 best_domain_score:18.9 name:SBP_bac_11; db:Pfam-A.hmm|PF13416.6 evalue:9e-15 score:54.4 best_domain_score:54.0 name:SBP_bac_8;
sp YES;
sprot_desc Alpha-glucosides-binding periplasmic protein AglE;
sprot_id sp|Q9Z3R5|AGLE_RHIME;
sprot_target db:uniprot_sprot|sp|Q9Z3R5|AGLE_RHIME 37 435 evalue:7.9e-79 qcov:91.10 identity:37.80;
51798 51866 lipoprotein_signal_peptide
ID metaerg.pl|11698
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
53191 54816 CDS
ID metaerg.pl|11699
allec_ids 3.2.1.20;
allgo_ids GO:0003824; GO:0005975; GO:0004558; GO:0032450;
allko_ids K01200; K05343; K00700; K01187; K00705; K01215; K01236; K01234; K01226; K01182; K01178; K01176;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441343.1 19 541 evalue:7.9e-167 qcov:96.70 identity:55.60;
kegg_pathway_id 00052; 00500;
kegg_pathway_name Galactose metabolism; Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id GLYCOCAT-PWY; PWY-842;
metacyc_pathway_name glycogen degradation I;; starch degradation I;;
metacyc_pathway_type Glycan-Degradation; Glycogen-Degradation;; Glycan-Degradation; Starch-Degradation;;
pfam_acc PF00128; PF11941;
pfam_desc Alpha amylase, catalytic domain; Domain of unknown function (DUF3459);
pfam_id Alpha-amylase; DUF3459;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:5.6e-74 score:248.9 best_domain_score:246.1 name:Alpha-amylase; db:Pfam-A.hmm|PF11941.8 evalue:2.3e-08 score:33.5 best_domain_score:33.2 name:DUF3459;
sprot_desc Probable alpha-glucosidase;
sprot_id sp|Q9Z3R8|AGLA_RHIME;
sprot_target db:uniprot_sprot|sp|Q9Z3R8|AGLA_RHIME 7 502 evalue:9.4e-90 qcov:91.70 identity:39.20;
55100 54849 CDS
ID metaerg.pl|11700
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
tm_num 2;
55100 54849 transmembrane_helix
ID metaerg.pl|11701
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology i54873-54941o55014-55082i;
56047 55190 CDS
ID metaerg.pl|11702
allec_ids 3.1.3.25;
allgo_ids GO:0046854; GO:0008934; GO:0052832; GO:0052833; GO:0046872; GO:0046855;
allko_ids K01092;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442294.1 14 282 evalue:8.1e-70 qcov:94.40 identity:57.00;
kegg_pathway_id 00521; 00562;
kegg_pathway_name Streptomycin biosynthesis; Inositol phosphate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY-2301;
metacyc_pathway_name myo-inositol biosynthesis;;
metacyc_pathway_type Cyclitols-Biosynthesis;;
pfam_acc PF00459;
pfam_desc Inositol monophosphatase family;
pfam_id Inositol_P;
pfam_target db:Pfam-A.hmm|PF00459.25 evalue:4.3e-47 score:160.1 best_domain_score:159.8 name:Inositol_P;
sprot_desc Inositol-1-monophosphatase;
sprot_id sp|Q87BG1|SUHB_XYLFT;
sprot_target db:uniprot_sprot|sp|Q87BG1|SUHB_XYLFT 6 248 evalue:1.0e-18 qcov:85.30 identity:35.70;
56309 57346 CDS
ID metaerg.pl|11703
allec_ids 1.14.19.42;
allgo_ids GO:0006629; GO:0031969; GO:0005789; GO:0016021; GO:0009579; GO:0009979; GO:0016717; GO:0031408; GO:0010205; GO:0006636;
allko_ids K20416;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668495.1 4 316 evalue:2.2e-125 qcov:90.70 identity:66.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00487;
pfam_desc Fatty acid desaturase;
pfam_id FA_desaturase;
pfam_target db:Pfam-A.hmm|PF00487.24 evalue:7.7e-21 score:74.3 best_domain_score:74.3 name:FA_desaturase;
sprot_desc Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic;
sprot_id sp|Q949X0|ADS3_ARATH;
sprot_target db:uniprot_sprot|sp|Q949X0|ADS3_ARATH 68 315 evalue:2.9e-52 qcov:71.90 identity:41.70;
tm_num 5;
56309 57346 transmembrane_helix
ID metaerg.pl|11704
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology o56408-56476i56495-56563o56591-56659i56861-56920o56930-56986i;
57607 58236 CDS
ID metaerg.pl|11705
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442295.1 7 196 evalue:8.0e-75 qcov:90.90 identity:77.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00440;
pfam_desc Bacterial regulatory proteins, tetR family;
pfam_id TetR_N;
pfam_target db:Pfam-A.hmm|PF00440.23 evalue:1.2e-17 score:62.6 best_domain_score:58.8 name:TetR_N;
58233 59486 CDS
ID metaerg.pl|11706
allec_ids 2.6.1.17;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0009016; GO:0009089;
allko_ids K10907; K00816; K00818; K14267; K00825; K00837; K14287; K00841; K14264;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441868.1 5 397 evalue:1.3e-124 qcov:94.20 identity:58.00;
kegg_pathway_id 00220; 00310; 00380; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Lysine degradation; Tryptophan metabolism; Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY0-781; DAPLYSINESYN-PWY; P4-PWY;
metacyc_pathway_name aspartate superpathway;; L-lysine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;;
metacyc_pathway_type Super-Pathways;; LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:3.9e-55 score:186.7 best_domain_score:186.5 name:Aminotran_1_2;
sprot_desc Probable N-succinyldiaminopimelate aminotransferase DapC;
sprot_id sp|P9WPZ4|DAPC_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WPZ4|DAPC_MYCTO 11 401 evalue:2.2e-99 qcov:93.80 identity:48.80;
59483 60304 CDS
ID metaerg.pl|11707
allec_ids 3.5.-.-;
allgo_ids GO:0006807; GO:0016787;
allko_ids K03820; K11206;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus atacamensis;
genomedb_acc GCF_002938425.1;
genomedb_target db:genomedb|GCF_002938425.1|WP_104525535.1 1 271 evalue:2.5e-76 qcov:99.30 identity:56.60;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00795;
pfam_desc Carbon-nitrogen hydrolase;
pfam_id CN_hydrolase;
pfam_target db:Pfam-A.hmm|PF00795.22 evalue:3e-36 score:124.3 best_domain_score:124.0 name:CN_hydrolase;
sprot_desc Hydrolase MT0498;
sprot_id sp|P9WJ00|Y480_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WJ00|Y480_MYCTO 14 271 evalue:9.4e-22 qcov:94.50 identity:32.50;
61079 62104 CDS
ID metaerg.pl|11708
allgo_ids GO:0004363; GO:0005524; GO:0006750;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668498.1 1 338 evalue:2.6e-83 qcov:99.10 identity:54.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF02955;
pfam_desc Prokaryotic glutathione synthetase, ATP-grasp domain;
pfam_id GSH-S_ATP;
pfam_target db:Pfam-A.hmm|PF02955.16 evalue:1.7e-05 score:23.6 best_domain_score:17.1 name:GSH-S_ATP;
62121 63227 CDS
ID metaerg.pl|11709
allec_ids 1.6.99.1;
allgo_ids GO:0010181; GO:0016491; GO:0055114; GO:0050661; GO:0003959; GO:0018548; GO:0052690; GO:0009636;
allko_ids K10797; K00354; K00540; K00219;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__SBR1031;f__A4b;g__ZC4RG36;s__ZC4RG36 sp003242205;
genomedb_acc GCA_003242205.1;
genomedb_target db:genomedb|GCA_003242205.1|PZN49389.1 1 354 evalue:1.0e-104 qcov:96.20 identity:58.60;
kegg_pathway_id 00360;
kegg_pathway_name Phenylalanine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00724;
pfam_desc NADH:flavin oxidoreductase / NADH oxidase family;
pfam_id Oxidored_FMN;
pfam_target db:Pfam-A.hmm|PF00724.20 evalue:8.7e-66 score:221.7 best_domain_score:221.4 name:Oxidored_FMN;
sprot_desc NADPH dehydrogenase;
sprot_id sp|A4IQK7|NAMA_GEOTN;
sprot_target db:uniprot_sprot|sp|A4IQK7|NAMA_GEOTN 2 358 evalue:7.6e-75 qcov:97.00 identity:45.00;
63309 64220 CDS
ID metaerg.pl|11710
allgo_ids GO:0003824; GO:0050662;
allko_ids K07071;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669957.1 3 296 evalue:1.8e-96 qcov:97.00 identity:63.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF08338; PF01370;
pfam_desc Domain of unknown function (DUF1731); NAD dependent epimerase/dehydratase family;
pfam_id DUF1731; Epimerase;
pfam_target db:Pfam-A.hmm|PF08338.11 evalue:5e-15 score:54.3 best_domain_score:53.5 name:DUF1731; db:Pfam-A.hmm|PF01370.21 evalue:1.5e-10 score:40.1 best_domain_score:38.3 name:Epimerase;
sprot_desc Epimerase family protein MT2273;
sprot_id sp|P9WGP6|Y2216_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WGP6|Y2216_MYCTO 4 293 evalue:8.4e-64 qcov:95.70 identity:45.40;
tigrfam_acc TIGR01777;
tigrfam_desc TIGR01777 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name yfcH;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR01777 evalue:8.9e-92 score:306.9 best_domain_score:306.7 name:TIGR01777;
64252 65517 CDS
ID metaerg.pl|11711
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Myxococcaceae;g__Archangium;s__Archangium gephyra;
genomedb_acc GCF_001027285.1;
genomedb_target db:genomedb|GCF_001027285.1|WP_047860231.1 8 419 evalue:4.4e-96 qcov:97.90 identity:50.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF01593; PF01266; PF00890; PF03486; PF05834; PF13450;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; HI0933-like protein; Lycopene cyclase protein; NAD(P)-binding Rossmann-like domain;
pfam_id Amino_oxidase; DAO; FAD_binding_2; HI0933_like; Lycopene_cycl; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:4.7e-43 score:147.3 best_domain_score:146.8 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:6.2e-08 score:31.8 best_domain_score:18.8 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.5e-06 score:26.8 best_domain_score:26.8 name:FAD_binding_2; db:Pfam-A.hmm|PF03486.14 evalue:2.6e-06 score:25.6 best_domain_score:23.2 name:HI0933_like; db:Pfam-A.hmm|PF05834.12 evalue:2.8e-06 score:25.9 best_domain_score:18.2 name:Lycopene_cycl; db:Pfam-A.hmm|PF13450.6 evalue:2e-16 score:59.2 best_domain_score:58.1 name:NAD_binding_8;
65574 65786 CDS
ID metaerg.pl|11712
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp002847285;
genomedb_acc GCF_002847285.1;
genomedb_target db:genomedb|GCF_002847285.1|WP_101424865.1 4 62 evalue:1.2e-06 qcov:84.30 identity:52.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
66019 67569 CDS
ID metaerg.pl|11713
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
67997 67584 CDS
ID metaerg.pl|11714
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669108.1 1 134 evalue:1.7e-33 qcov:97.80 identity:53.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00903; PF18029;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase-like domain;
pfam_id Glyoxalase; Glyoxalase_6;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:6.8e-08 score:32.0 best_domain_score:30.4 name:Glyoxalase; db:Pfam-A.hmm|PF18029.1 evalue:6e-08 score:32.7 best_domain_score:31.6 name:Glyoxalase_6;
69203 68295 CDS
ID metaerg.pl|11715
allgo_ids GO:0003700; GO:0006355; GO:0043565;
allko_ids K10778; K00567;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Prauserella_A;s__Prauserella_A coralliicola;
genomedb_acc GCA_003202275.1;
genomedb_target db:genomedb|GCA_003202275.1|PXY26174.1 19 292 evalue:2.0e-50 qcov:90.70 identity:44.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF12833; PF00165;
pfam_desc Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF12833.7 evalue:8.7e-18 score:63.6 best_domain_score:62.6 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:1.3e-09 score:37.1 best_domain_score:19.0 name:HTH_AraC;
69329 70135 CDS
ID metaerg.pl|11716
allgo_ids GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Nocardia;s__Nocardia amikacinitolerans;
genomedb_acc GCF_001612615.1;
genomedb_target db:genomedb|GCF_001612615.1|WP_067779878.1 11 268 evalue:3.7e-56 qcov:96.30 identity:46.10;
kegg_pathway_id 00350; 00380; 00340; 00150; 00626; 00450;
kegg_pathway_name Tyrosine metabolism; Tryptophan metabolism; Histidine metabolism; Androgen and estrogen metabolism; Naphthalene and anthracene degradation; Selenoamino acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF08241; PF08242; PF13649; PF13847;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_25; Methyltransf_31;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:3.9e-15 score:55.5 best_domain_score:54.5 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:5.3e-12 score:45.6 best_domain_score:44.6 name:Methyltransf_12; db:Pfam-A.hmm|PF13649.6 evalue:1.2e-16 score:60.4 best_domain_score:58.8 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:1.4e-12 score:46.9 best_domain_score:46.5 name:Methyltransf_31;
70789 70181 CDS
ID metaerg.pl|11717
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441220.1 4 200 evalue:8.6e-74 qcov:97.50 identity:72.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF03458;
pfam_desc UPF0126 domain;
pfam_id UPF0126;
pfam_target db:Pfam-A.hmm|PF03458.13 evalue:8.8e-36 score:120.9 best_domain_score:68.3 name:UPF0126;
sprot_desc hypothetical protein;
sprot_id sp|Q9RRW7|Y2368_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RRW7|Y2368_DEIRA 9 200 evalue:1.9e-35 qcov:95.00 identity:46.90;
tm_num 5;
70789 70181 transmembrane_helix
ID metaerg.pl|11718
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology o70193-70246i70265-70333o70370-70429i70466-70534o70655-70723i;
71469 70852 CDS
ID metaerg.pl|11719
allec_ids 1.5.1.42; 1.-.-.-;
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Geodermatophilaceae;g__Blastococcus;s__Blastococcus sp900102115;
genomedb_acc GCA_900102115.1;
genomedb_target db:genomedb|GCA_900102115.1|SDE58873.1 3 204 evalue:9.6e-65 qcov:98.50 identity:69.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY-4302; PWY-5271; PWY-5826; PWY-2821; PWY-5469; PWY-5479; PWY-5987; PWY-6113; PWYG-321;
metacyc_pathway_name aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF03358;
pfam_desc NADPH-dependent FMN reductase;
pfam_id FMN_red;
pfam_target db:Pfam-A.hmm|PF03358.15 evalue:1.4e-32 score:111.8 best_domain_score:111.4 name:FMN_red;
sprot_desc NADH-dependent FMN reductase SfnF;
sprot_id sp|Q65YX0|SFNF_PSEPU;
sprot_target db:uniprot_sprot|sp|Q65YX0|SFNF_PSEPU 6 171 evalue:2.8e-18 qcov:81.00 identity:37.30;
tigrfam_acc TIGR04037;
tigrfam_desc LLM-partnered FMN reductase, CE1759 family;
tigrfam_name LLM_duo_CE1759;
tigrfam_target db:TIGRFAMs.hmm|TIGR04037 evalue:1.5e-80 score:268.7 best_domain_score:268.6 name:TIGR04037;
72632 71514 CDS
ID metaerg.pl|11720
allec_ids 1.-.-.-;
allgo_ids GO:0016705; GO:0055114;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces leeuwenhoekii;
genomedb_acc GCF_001013905.1;
genomedb_target db:genomedb|GCF_001013905.1|WP_047121846.1 1 371 evalue:3.0e-181 qcov:99.70 identity:82.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY-5469; PWY-5987; PWY-5479; PWY-6113; PWYG-321; PWY-4302; PWY-5271; PWY-5826; PWY-2821;
metacyc_pathway_name sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;;
metacyc_pathway_type LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:4.2e-57 score:193.2 best_domain_score:190.9 name:Bac_luciferase;
tigrfam_acc TIGR04036;
tigrfam_desc putative luciferase-like monooxygenase, FMN-dependent, CE1758 family;
tigrfam_mainrole Unknown function;
tigrfam_name LLM_CE1758_fam;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR04036 evalue:5e-209 score:692.4 best_domain_score:692.2 name:TIGR04036;
73960 72803 CDS
ID metaerg.pl|11721
allec_ids 2.3.3.16;
allgo_ids GO:0046912; GO:0006099;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp000514715;
genomedb_acc GCF_000514715.1;
genomedb_target db:genomedb|GCF_000514715.1|WP_027757364.1 12 383 evalue:2.0e-103 qcov:96.60 identity:55.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00285;
pfam_desc Citrate synthase, C-terminal domain;
pfam_id Citrate_synt;
pfam_target db:Pfam-A.hmm|PF00285.21 evalue:6e-94 score:314.3 best_domain_score:314.1 name:Citrate_synt;
sprot_desc Putative citrate synthase 2;
sprot_id sp|P63778|CISY2_MYCBO;
sprot_target db:uniprot_sprot|sp|P63778|CISY2_MYCBO 19 381 evalue:2.4e-63 qcov:94.30 identity:41.20;
74090 75268 CDS
ID metaerg.pl|11722
allec_ids 2.3.3.16;
allgo_ids GO:0046912; GO:0005737; GO:0006099;
allko_ids K01647;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__PALSA-505;s__PALSA-505 sp003168255;
genomedb_acc GCA_003168255.1;
genomedb_target db:genomedb|GCA_003168255.1|PMSU01000047.1_100 3 391 evalue:1.8e-64 qcov:99.20 identity:44.20;
kegg_pathway_id 00020; 00630;
kegg_pathway_name Citrate cycle (TCA cycle); Glyoxylate and dicarboxylate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00285; PF12728;
pfam_desc Citrate synthase, C-terminal domain; Helix-turn-helix domain;
pfam_id Citrate_synt; HTH_17;
pfam_target db:Pfam-A.hmm|PF00285.21 evalue:1.9e-53 score:181.1 best_domain_score:180.6 name:Citrate_synt; db:Pfam-A.hmm|PF12728.7 evalue:6.5e-07 score:28.7 best_domain_score:27.9 name:HTH_17;
sprot_desc Citrate synthase;
sprot_id sp|Q53554|CISY_PYRFU;
sprot_target db:uniprot_sprot|sp|Q53554|CISY_PYRFU 80 391 evalue:4.5e-09 qcov:79.60 identity:26.10;
75364 75999 CDS
ID metaerg.pl|11723
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664975.1 1 208 evalue:7.6e-49 qcov:98.60 identity:52.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF10688;
pfam_desc Bacterial inner membrane protein;
pfam_id Imp-YgjV;
pfam_target db:Pfam-A.hmm|PF10688.9 evalue:5e-06 score:25.7 best_domain_score:25.3 name:Imp-YgjV;
tm_num 2;
75364 75999 transmembrane_helix
ID metaerg.pl|11724
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
topology o75376-75444i75481-75549o;
76471 77136 CDS
ID metaerg.pl|11725
allec_ids 3.1.3.79;
allgo_ids GO:0016791; GO:0046351;
allko_ids K13086;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Oceanibaculales;f__Oceanibaculaceae;g__Oceanibaculum;s__Oceanibaculum pacificum;
genomedb_acc GCF_001618175.1;
genomedb_target db:genomedb|GCF_001618175.1|WP_067551596.1 2 204 evalue:2.4e-69 qcov:91.90 identity:65.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
metacyc_pathway_id PWY-6116;
metacyc_pathway_name mannosylfructose biosynthesis;;
metacyc_pathway_type Oligosaccharides-Biosynthesis;;
pfam_acc PF08282; PF05116;
pfam_desc haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase;
pfam_id Hydrolase_3; S6PP;
pfam_target db:Pfam-A.hmm|PF08282.12 evalue:1.7e-13 score:50.2 best_domain_score:49.0 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:9e-41 score:139.3 best_domain_score:139.1 name:S6PP;
sprot_desc Mannosylfructose-phosphate phosphatase;
sprot_id sp|A9CK30|MFPP_AGRFC;
sprot_target db:uniprot_sprot|sp|A9CK30|MFPP_AGRFC 2 205 evalue:5.8e-14 qcov:92.30 identity:29.40;
77133 78623 CDS
ID metaerg.pl|11726
allec_ids 2.4.1.213;
allgo_ids GO:0003824; GO:0005992; GO:0005737; GO:0005829; GO:0047260; GO:0033828; GO:0030145; GO:0006974; GO:0016311; GO:0051473; GO:0006970; GO:0070415; GO:0070413;
allko_ids K00697; K01087; K03692;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Ponticaulis;s__Ponticaulis sp002723155;
genomedb_acc GCA_002723155.1;
genomedb_target db:genomedb|GCA_002723155.1|MBN05185.1 2 492 evalue:1.0e-176 qcov:99.00 identity:59.10;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
pfam_acc PF00982;
pfam_desc Glycosyltransferase family 20;
pfam_id Glyco_transf_20;
pfam_target db:Pfam-A.hmm|PF00982.21 evalue:2.6e-138 score:460.9 best_domain_score:460.6 name:Glyco_transf_20;
sprot_desc Glucosylglycerol-phosphate synthase;
sprot_id sp|P74258|GGPS_SYNY3;
sprot_target db:uniprot_sprot|sp|P74258|GGPS_SYNY3 1 487 evalue:4.8e-165 qcov:98.20 identity:54.40;
tigrfam_acc TIGR02398;
tigrfam_desc glucosylglycerol-phosphate synthase;
tigrfam_name gluc_glyc_Psyn;
tigrfam_target db:TIGRFAMs.hmm|TIGR02398 evalue:5.9e-208 score:690.5 best_domain_score:690.3 name:TIGR02398;
79166 78699 CDS
ID metaerg.pl|11727
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668540.1 1 155 evalue:4.2e-36 qcov:100.00 identity:53.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.103009; 25.401; 0.105322; 25.0709; 0.121732;
>Feature NODE_89_length_78815_cov_16.8422
866 102 CDS
ID metaerg.pl|11728
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441880.1 1 254 evalue:2.4e-81 qcov:100.00 identity:66.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF10517;
pfam_desc Electron transfer DM13;
pfam_id DM13;
pfam_target db:Pfam-A.hmm|PF10517.9 evalue:2.1e-19 score:69.3 best_domain_score:68.8 name:DM13;
tm_num 1;
866 102 transmembrane_helix
ID metaerg.pl|11729
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i162-221o;
2503 935 CDS
ID metaerg.pl|11730
allgo_ids GO:0042128;
allko_ids K10534; K05301; K02016; K00387; K00360;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441881.1 1 522 evalue:2.4e-237 qcov:100.00 identity:81.40;
kegg_pathway_id 00910; 00920; 02010;
kegg_pathway_name Nitrogen metabolism; Sulfur metabolism; ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF17957; PF00174;
pfam_desc Bacterial Ig domain; Oxidoreductase molybdopterin binding domain;
pfam_id Big_7; Oxidored_molyb;
pfam_target db:Pfam-A.hmm|PF17957.1 evalue:9e-06 score:25.6 best_domain_score:24.2 name:Big_7; db:Pfam-A.hmm|PF00174.19 evalue:1.6e-35 score:121.5 best_domain_score:120.7 name:Oxidored_molyb;
sp YES;
tm_num 5;
935 1012 signal_peptide
ID metaerg.pl|11731
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
2503 935 transmembrane_helix
ID metaerg.pl|11732
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i971-1039o1139-1207i1220-1273o1283-1351i1457-1525o;
2772 3494 CDS
ID metaerg.pl|11733
allgo_ids GO:0000160; GO:0009507; GO:0003677; GO:0006355;
allko_ids K02482; K02480; K07638; K07653; K07636; K02030; K11527; K07678; K10715; K02668; K03388; K08479; K10916; K02489; K07716; K07710; K01768; K13761; K11383; K02486; K12767; K07769; K04757; K11357; K10125; K07647; K07717; K07675; K01769; K10681; K07676; K06379; K07709; K07644; K11354; K07778; K02575; K07768; K08884; K07711; K00873; K02478; K07679; K07648; K07651; K07718; K07654; K07682; K03407; K07637; K07646; K07641; K01120; K07673; K07639; K08475; K07652; K07708; K07677; K07704; K10909; K08282; K01937; K11231; K13490; K02491; K11711; K07642; K02484; K00760; K11356; K11640;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669938.1 25 240 evalue:4.1e-107 qcov:90.00 identity:92.10;
kegg_pathway_id 00710; 00010; 00983; 00230; 05111; 00240; 02020; 04011; 00620; 03090; 00790;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Drug metabolism - other enzymes; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:4.1e-30 score:103.5 best_domain_score:103.0 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:5.2e-25 score:86.6 best_domain_score:85.6 name:Trans_reg_C;
sprot_desc Probable transcriptional regulator ycf27;
sprot_id sp|O78428|YCF27_GUITH;
sprot_target db:uniprot_sprot|sp|O78428|YCF27_GUITH 12 239 evalue:3.9e-48 qcov:95.00 identity:44.20;
3491 4696 CDS
ID metaerg.pl|11734
allgo_ids GO:0007165; GO:0016021;
allko_ids K12767; K02486; K11383; K11520; K14509; K07769; K04757; K11629; K10125; K11357; K07680; K07647; K10942; K13040; K07675; K07717; K01769; K07650; K06379; K07676; K10681; K07709; K13532; K07644; K02482; K08801; K02480; K07638; K07653; K07636; K02030; K11527; K10715; K07678; K07655; K02668; K03388; K07674; K08479; K10916; K02489; K07716; K07640; K07710; K07656; K01768; K07708; K07645; K07677; K07704; K10909; K08282; K11231; K07643; K02491; K11711; K07642; K02484; K11356; K11640; K07778; K07683; K11354; K11633; K07768; K07711; K08884; K13533; K11328; K07679; K02478; K07648; K07651; K07718; K07698; K07654; K07649; K00936; K07682; K07777; K03407; K07637; K13598; K07641; K07646; K07639; K08475; K07673; K07652;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668413.1 1 400 evalue:2.2e-190 qcov:99.80 identity:89.80;
kegg_pathway_id 00230; 05111; 00790; 03090; 02020; 04011;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Folate biosynthesis; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF00672; PF02518; PF00512;
pfam_desc HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HAMP; HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF00672.25 evalue:1.5e-12 score:46.9 best_domain_score:46.0 name:HAMP; db:Pfam-A.hmm|PF02518.26 evalue:1.8e-25 score:88.8 best_domain_score:87.3 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:2.5e-11 score:42.7 best_domain_score:42.7 name:HisKA;
sp YES;
tm_num 4;
3491 3553 signal_peptide
ID metaerg.pl|11735
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
3491 4696 transmembrane_helix
ID metaerg.pl|11736
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i3503-3559o3587-3646i3683-3751o3779-3847i;
4905 5345 CDS
ID metaerg.pl|11737
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
sp YES;
4905 4976 signal_peptide
ID metaerg.pl|11738
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
7247 6072 CDS
ID metaerg.pl|11739
allgo_ids GO:0005515; GO:0007165;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF13676;
pfam_desc TIR domain;
pfam_id TIR_2;
pfam_target db:Pfam-A.hmm|PF13676.6 evalue:2.8e-13 score:49.8 best_domain_score:49.1 name:TIR_2;
tm_num 1;
7247 6072 transmembrane_helix
ID metaerg.pl|11740
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i6642-6710o;
7373 8284 CDS
ID metaerg.pl|11741
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Thermomonospora;s__Thermomonospora echinospora;
genomedb_acc GCF_900108175.1;
genomedb_target db:genomedb|GCF_900108175.1|WP_103938048.1 10 285 evalue:3.5e-55 qcov:91.10 identity:50.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF14015; PF18181;
pfam_desc Protein of unknown function (DUF4231); SMODS and SLOG-associating 2TM effector domain 1;
pfam_id DUF4231; SLATT_1;
pfam_target db:Pfam-A.hmm|PF14015.6 evalue:4.9e-15 score:55.1 best_domain_score:38.3 name:DUF4231; db:Pfam-A.hmm|PF18181.1 evalue:1.6e-20 score:72.5 best_domain_score:68.8 name:SLATT_1;
tm_num 2;
7373 8284 transmembrane_helix
ID metaerg.pl|11742
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i7475-7543o7553-7606i;
9589 8345 CDS
ID metaerg.pl|11743
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA4744;g__BMS3Bbin01;s__BMS3Bbin01 sp002897675;
genomedb_acc GCA_002897675.1;
genomedb_target db:genomedb|GCA_002897675.1|GBD84584.1 34 403 evalue:1.8e-38 qcov:89.40 identity:32.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
tm_num 1;
9589 8345 transmembrane_helix
ID metaerg.pl|11744
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i8651-8719o;
10187 9717 CDS
ID metaerg.pl|11745
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0003677; GO:0016987;
allko_ids K03088;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA4744;g__BMS3Bbin01;s__BMS3Bbin01 sp002897675;
genomedb_acc GCA_002897675.1;
genomedb_target db:genomedb|GCA_002897675.1|GBD84585.1 7 152 evalue:4.5e-46 qcov:93.60 identity:66.00;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF04542; PF04545; PF08281;
pfam_desc Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF04542.14 evalue:1.1e-15 score:56.4 best_domain_score:55.7 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:9.6e-08 score:30.7 best_domain_score:29.9 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:1.6e-13 score:49.4 best_domain_score:48.8 name:Sigma70_r4_2;
sprot_desc ECF RNA polymerase sigma factor SigM;
sprot_id sp|O07582|SIGM_BACSU;
sprot_target db:uniprot_sprot|sp|O07582|SIGM_BACSU 7 152 evalue:1.5e-11 qcov:93.60 identity:30.50;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:1.5e-19 score:69.4 best_domain_score:67.0 name:TIGR02937;
11728 10964 CDS
ID metaerg.pl|11746
allgo_ids GO:0006508; GO:0008236;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Cohaesibacteraceae;g__Cohaesibacter;s__Cohaesibacter gelatinilyticus;
genomedb_acc GCF_900215605.1;
genomedb_target db:genomedb|GCF_900215605.1|WP_097151980.1 1 252 evalue:1.4e-76 qcov:99.20 identity:60.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF00561; PF12697; PF12146; PF00326;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33; Prolyl oligopeptidase family;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:6.7e-08 score:31.7 best_domain_score:31.4 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:4.7e-11 score:42.9 best_domain_score:39.4 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:4.9e-15 score:54.7 best_domain_score:45.5 name:Hydrolase_4; db:Pfam-A.hmm|PF00326.21 evalue:4.6e-07 score:28.8 best_domain_score:28.0 name:Peptidase_S9;
11758 12528 CDS
ID metaerg.pl|11747
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
14166 12451 CDS
ID metaerg.pl|11748
genomedb_OC d__Bacteria;p__Dormibacterota;c__Dormibacteria;o__Dormibacterales;f__Dormibacteraceae;g__Palsa-870;s__Palsa-870 sp003169845;
genomedb_acc GCA_003169845.1;
genomedb_target db:genomedb|GCA_003169845.1|PNAG01000002.1_133 6 571 evalue:2.5e-134 qcov:99.10 identity:47.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF01935; PF08282; PF05116;
pfam_desc Helicase HerA, central domain; haloacid dehalogenase-like hydrolase; Sucrose-6F-phosphate phosphohydrolase;
pfam_id DUF87; Hydrolase_3; S6PP;
pfam_target db:Pfam-A.hmm|PF01935.17 evalue:6e-08 score:32.3 best_domain_score:30.9 name:DUF87; db:Pfam-A.hmm|PF08282.12 evalue:1.8e-26 score:92.7 best_domain_score:66.0 name:Hydrolase_3; db:Pfam-A.hmm|PF05116.13 evalue:2.4e-08 score:33.0 best_domain_score:24.5 name:S6PP;
tigrfam_acc TIGR01484;
tigrfam_desc HAD hydrolase, family IIB;
tigrfam_mainrole Unknown function;
tigrfam_name HAD-SF-IIB;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01484 evalue:4.4e-17 score:62.0 best_domain_score:33.3 name:TIGR01484;
14742 17558 CDS
ID metaerg.pl|11749
allgo_ids GO:0016746;
allko_ids K01652; K01897; K13510; K01909; K01904; K01895; K05939; K01586; K01779; K02364; K00992; K00143; K03367; K13512; K01776;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Acidiferrobacterales;f__Sulfurifustaceae;g__RBG-16-65-34;s__RBG-16-65-34 sp001785115;
genomedb_acc GCA_001785115.1;
genomedb_target db:genomedb|GCA_001785115.1|OGI46023.1 17 937 evalue:1.3e-281 qcov:98.20 identity:56.40;
kegg_pathway_id 00720; 00940; 00620; 00650; 00640; 00300; 00010; 00310; 00564; 00290; 00770; 01053; 00473; 00251; 00252; 00660; 00471; 00071;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis; Pyruvate metabolism; Butanoate metabolism; Propanoate metabolism; Lysine biosynthesis; Glycolysis / Gluconeogenesis; Lysine degradation; Glycerophospholipid metabolism; Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; D-Alanine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF01553; PF00501; PF00550;
pfam_desc Acyltransferase; AMP-binding enzyme; Phosphopantetheine attachment site;
pfam_id Acyltransferase; AMP-binding; PP-binding;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:7.6e-23 score:79.9 best_domain_score:78.8 name:Acyltransferase; db:Pfam-A.hmm|PF00501.28 evalue:1.8e-79 score:266.5 best_domain_score:266.2 name:AMP-binding; db:Pfam-A.hmm|PF00550.25 evalue:7.9e-11 score:41.4 best_domain_score:40.4 name:PP-binding;
tm_num 3;
14742 17558 transmembrane_helix
ID metaerg.pl|11750
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i15306-15365o15744-15812i16860-16928o;
17555 18802 CDS
ID metaerg.pl|11751
allgo_ids GO:0016021; GO:0055085;
allko_ids K08219; K08217;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667582.1 9 414 evalue:3.7e-140 qcov:97.80 identity:71.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF07690; PF00083;
pfam_desc Major Facilitator Superfamily; Sugar (and other) transporter;
pfam_id MFS_1; Sugar_tr;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:4.4e-26 score:90.9 best_domain_score:68.0 name:MFS_1; db:Pfam-A.hmm|PF00083.24 evalue:2.1e-08 score:32.7 best_domain_score:23.8 name:Sugar_tr;
sp YES;
tm_num 11;
17555 17656 signal_peptide
ID metaerg.pl|11752
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
17555 18802 transmembrane_helix
ID metaerg.pl|11753
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i17591-17659o17735-17803i17837-17890o17900-17968i18005-18064o18092-18151i18239-18307o18335-18403i18422-18490o18503-18571i18608-18676o;
19284 18859 CDS
ID metaerg.pl|11754
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
19438 19668 CDS
ID metaerg.pl|11755
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
19665 19910 CDS
ID metaerg.pl|11756
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
19978 20685 CDS
ID metaerg.pl|11757
allgo_ids GO:0006355; GO:0005737; GO:0044161; GO:0003677; GO:0000160;
allko_ids K01120; K07673; K07646; K07641; K07652; K07682; K07654; K03407; K07651; K07778; K02484; K11640; K11356; K07642; K07677; K08282; K07716; K07710; K03388; K02668; K07674; K08479; K02480; K02482; K07636; K07653; K07709; K07644; K07676; K06379; K07647; K07675; K02486; K11357; K10125; K04757; K07695;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces_B;s__Streptomyces_B glauciniger;
genomedb_acc GCF_900188405.1;
genomedb_target db:genomedb|GCF_900188405.1|WP_089227525.1 4 210 evalue:2.5e-48 qcov:88.10 identity:53.60;
kegg_pathway_id 00230; 00790; 03090; 02020;
kegg_pathway_name Purine metabolism; Folate biosynthesis; Type II secretion system; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF00196; PF00072; PF08281;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain; Sigma-70, region 4;
pfam_id GerE; Response_reg; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:2.2e-12 score:45.6 best_domain_score:44.9 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:1.7e-22 score:78.9 best_domain_score:78.4 name:Response_reg; db:Pfam-A.hmm|PF08281.12 evalue:5.3e-08 score:31.6 best_domain_score:30.5 name:Sigma70_r4_2;
sprot_desc DNA-binding transcriptional activator DevR/DosR;
sprot_id sp|P9WMF8|DEVR_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WMF8|DEVR_MYCTO 5 214 evalue:3.2e-42 qcov:89.40 identity:48.10;
22156 20663 CDS
ID metaerg.pl|11758
allgo_ids GO:0000155; GO:0007165;
allko_ids K07645; K07708; K07677; K10909; K07704; K01937; K08282; K11231; K07643; K02491; K01090; K11711; K07642; K02484; K11356; K04486; K11640; K07778; K11354; K07768; K11633; K02575; K07711; K08884; K13533; K11328; K07679; K07648; K07651; K11623; K07718; K07698; K07654; K07649; K00936; K07682; K07777; K03407; K07637; K13598; K07641; K07646; K07639; K08475; K07673; K07652; K12767; K11383; K02486; K14509; K11520; K07769; K11617; K04757; K02342; K10125; K11629; K11357; K07680; K07647; K13040; K10942; K07675; K07717; K01769; K07650; K06379; K07676; K10681; K07709; K13532; K07644; K08801; K02482; K14489; K02480; K07638; K07653; K07636; K11527; K02030; K13587; K10715; K07678; K02668; K03388; K07674; K08479; K10916; K07697; K02489; K07716; K07710; K07640; K07656; K01768;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Coleofasciculaceae;g__Coleofasciculus;s__Coleofasciculus chthonoplastes;
genomedb_acc GCF_000155555.1;
genomedb_target db:genomedb|GCF_000155555.1|WP_083799224.1 32 494 evalue:3.6e-73 qcov:93.20 identity:37.90;
kegg_pathway_id 00790; 00340; 04011; 02020; 03090; 05111; 00230; 03030; 00240;
kegg_pathway_name Folate biosynthesis; Histidine metabolism; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Vibrio cholerae pathogenic cycle; Purine metabolism; DNA replication; Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF02518; PF00512; PF00989; PF14598; PF08447; PF08448; PF13188; PF13426;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS domain; PAS fold; PAS fold; PAS domain; PAS domain;
pfam_id HATPase_c; HisKA; PAS; PAS_11; PAS_3; PAS_4; PAS_8; PAS_9;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:3.9e-19 score:68.4 best_domain_score:66.5 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:7e-11 score:41.2 best_domain_score:39.8 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:1.4e-24 score:85.5 best_domain_score:43.9 name:PAS; db:Pfam-A.hmm|PF14598.6 evalue:1.1e-07 score:31.2 best_domain_score:26.6 name:PAS_11; db:Pfam-A.hmm|PF08447.12 evalue:9.9e-28 score:95.5 best_domain_score:55.2 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:9.4e-26 score:89.5 best_domain_score:49.3 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:2.1e-14 score:52.4 best_domain_score:32.8 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:1.2e-21 score:76.2 best_domain_score:42.1 name:PAS_9;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:2.1e-45 score:153.1 best_domain_score:85.6 name:TIGR00229;
24070 22376 CDS
ID metaerg.pl|11759
allgo_ids GO:0016491; GO:0055114;
allko_ids K02480; K02482; K07636; K07653; K03388; K02668; K08479; K07716; K01768; K07710; K00384; K11357; K04757; K07675; K07717; K06379; K10681; K07644; K07778; K07682; K07654; K03407; K07639; K07673; K07641; K07646; K07677; K08282; K02491; K07642; K02484;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664225.1 17 563 evalue:2.7e-218 qcov:97.00 identity:70.40;
kegg_pathway_id 00230; 00790; 00240; 02020; 03090;
kegg_pathway_name Purine metabolism; Folate biosynthesis; Pyrimidine metabolism; Two-component system - General; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF00890; PF00070; PF07992; PF13738; PF00072;
pfam_desc FAD binding domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Response regulator receiver domain;
pfam_id FAD_binding_2; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Response_reg;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:1.8e-05 score:23.2 best_domain_score:23.2 name:FAD_binding_2; db:Pfam-A.hmm|PF00070.27 evalue:1.2e-07 score:31.4 best_domain_score:26.1 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:4.4e-32 score:110.7 best_domain_score:110.0 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:2.4e-13 score:49.2 best_domain_score:32.1 name:Pyr_redox_3; db:Pfam-A.hmm|PF00072.24 evalue:9.9e-15 score:53.9 best_domain_score:53.1 name:Response_reg;
25493 24060 CDS
ID metaerg.pl|11760
allgo_ids GO:0000160;
allko_ids K07675; K07717; K11637; K13040; K10942; K07647; K11629; K10125; K02476; K11357; K04757; K14509; K11520; K07769; K12767; K13761; K02486; K11383; K07644; K07709; K13532; K06379; K10681; K07676; K07650; K01769; K10715; K07678; K11527; K02030; K13587; K07636; K07653; K07638; K02480; K08801; K02482; K14489; K07656; K01768; K07640; K07710; K07716; K02489; K07697; K10916; K08479; K03388; K02668; K02491; K13490; K07643; K11231; K08282; K07704; K10909; K07677; K07645; K07708; K11640; K11356; K00760; K02484; K07642; K11711; K07718; K07698; K07651; K07648; K07679; K02478; K13533; K11328; K07711; K00873; K07768; K11633; K07778; K11354; K07652; K08475; K07639; K01120; K07673; K13598; K07641; K07646; K07637; K03407; K00936; K07682; K07649; K07654;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441087.1 1 475 evalue:1.0e-141 qcov:99.60 identity:59.40;
kegg_pathway_id 00230; 05111; 00983; 00010; 00710; 00790; 00620; 03090; 02020; 04011;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Drug metabolism - other enzymes; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Folate biosynthesis; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF02518; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain;
pfam_id HATPase_c; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:9.6e-22 score:76.9 best_domain_score:76.1 name:HATPase_c; db:Pfam-A.hmm|PF00072.24 evalue:9.6e-25 score:86.2 best_domain_score:84.4 name:Response_reg;
28041 25483 CDS
ID metaerg.pl|11761
allgo_ids GO:0000155; GO:0007165;
allko_ids K07648; K02478; K07679; K07698; K07718; K07651; K11633; K07768; K11354; K07778; K11328; K13533; K08884; K00873; K07711; K07673; K01120; K08475; K07639; K07646; K07641; K13598; K07652; K07682; K00936; K07649; K07654; K07637; K03407; K11231; K07643; K13490; K02491; K07708; K07645; K07677; K08282; K01937; K07704; K10909; K02484; K00760; K11640; K11356; K11711; K07642; K13587; K02030; K11527; K07678; K10715; K02480; K14489; K08801; K02482; K07636; K07653; K07638; K07716; K07697; K02489; K01768; K07656; K07640; K07710; K03388; K02668; K10916; K08479; K07674; K13040; K10942; K07647; K07717; K07675; K07769; K11520; K14509; K02486; K11383; K12767; K11357; K11629; K10125; K04757; K13532; K07709; K07644; K01769; K07676; K10681; K06379; K07650;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664227.1 9 851 evalue:1.7e-211 qcov:98.90 identity:51.40;
kegg_pathway_id 03090; 00620; 04011; 02020; 00790; 00983; 00710; 00010; 00240; 00230; 05111;
kegg_pathway_name Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Folate biosynthesis; Drug metabolism - other enzymes; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF02518; PF00512; PF01627; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Hpt domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; Hpt; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:4.4e-29 score:100.5 best_domain_score:99.8 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:3.5e-19 score:67.8 best_domain_score:65.8 name:HisKA; db:Pfam-A.hmm|PF01627.23 evalue:1.3e-10 score:40.7 best_domain_score:38.7 name:Hpt; db:Pfam-A.hmm|PF00072.24 evalue:5.1e-32 score:109.6 best_domain_score:85.7 name:Response_reg;
tm_num 5;
28041 25483 transmembrane_helix
ID metaerg.pl|11762
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i25567-25635o25645-25698i25735-25803o25861-25929i25948-26016o;
28777 28034 CDS
ID metaerg.pl|11763
allgo_ids GO:0000160;
allko_ids K02482; K02480; K07653; K07636; K11527; K07678; K10715; K02668; K03388; K08479; K10916; K02489; K07716; K07710; K01768; K13761; K11383; K02486; K12767; K04757; K11357; K10125; K07647; K07717; K07675; K07676; K10681; K06379; K07644; K11354; K07778; K07768; K07711; K02478; K07679; K07648; K07651; K07718; K07654; K07682; K03407; K07637; K07646; K07641; K07673; K01120; K07639; K08475; K07652; K07708; K07677; K07704; K08282; K11231; K11711; K07642; K02484; K00760; K11356; K11640;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664228.1 1 237 evalue:2.0e-56 qcov:96.00 identity:57.00;
kegg_pathway_id 00983; 03090; 02020; 04011; 05111; 00790; 00230;
kegg_pathway_name Drug metabolism - other enzymes; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Vibrio cholerae pathogenic cycle; Folate biosynthesis; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:2.1e-24 score:85.1 best_domain_score:80.6 name:Response_reg;
sp YES;
28034 28153 signal_peptide
ID metaerg.pl|11764
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
31038 28777 CDS
ID metaerg.pl|11765
allgo_ids GO:0003333;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664229.1 1 735 evalue:2.4e-182 qcov:97.60 identity:52.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF01490; PF03222;
pfam_desc Transmembrane amino acid transporter protein; Tryptophan/tyrosine permease family;
pfam_id Aa_trans; Trp_Tyr_perm;
pfam_target db:Pfam-A.hmm|PF01490.18 evalue:2.7e-09 score:35.5 best_domain_score:35.5 name:Aa_trans; db:Pfam-A.hmm|PF03222.13 evalue:8.4e-14 score:50.6 best_domain_score:50.1 name:Trp_Tyr_perm;
tm_num 12;
31038 28777 transmembrane_helix
ID metaerg.pl|11766
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i29281-29349o29362-29430i29533-29601o29611-29679i29698-29766o29854-29922i29983-30051o30094-30162i30217-30270o30298-30366i30427-30495o30511-30579i;
31793 31038 CDS
ID metaerg.pl|11767
allgo_ids GO:0009898; GO:0005829; GO:0005886; GO:0005524; GO:0016887; GO:0051782;
allko_ids K03609;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664230.1 4 251 evalue:3.3e-91 qcov:98.80 identity:70.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF13614; PF01656; PF10609;
pfam_desc AAA domain; CobQ/CobB/MinD/ParA nucleotide binding domain; NUBPL iron-transfer P-loop NTPase;
pfam_id AAA_31; CbiA; ParA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:1.6e-16 score:60.0 best_domain_score:59.6 name:AAA_31; db:Pfam-A.hmm|PF01656.23 evalue:5.6e-17 score:61.2 best_domain_score:60.2 name:CbiA; db:Pfam-A.hmm|PF10609.9 evalue:1.3e-18 score:66.6 best_domain_score:65.0 name:ParA;
sprot_desc Uncharacterized ATP-binding protein MJ0547;
sprot_id sp|Q57967|Y547_METJA;
sprot_target db:uniprot_sprot|sp|Q57967|Y547_METJA 1 247 evalue:8.1e-20 qcov:98.40 identity:30.20;
32256 32897 CDS
ID metaerg.pl|11768
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665019.1 12 202 evalue:2.1e-30 qcov:89.70 identity:43.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
tm_num 1;
32256 32897 transmembrane_helix
ID metaerg.pl|11769
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology o32796-32864i;
32894 33769 CDS
ID metaerg.pl|11770
allgo_ids GO:0015099; GO:0016021; GO:0035444; GO:0046872; GO:0005886; GO:0046583; GO:0006824; GO:0035784; GO:0032025; GO:0010045;
allko_ids K08970;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441230.1 12 288 evalue:6.8e-48 qcov:95.20 identity:49.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF03824;
pfam_desc High-affinity nickel-transport protein;
pfam_id NicO;
pfam_target db:Pfam-A.hmm|PF03824.16 evalue:1.5e-09 score:36.8 best_domain_score:36.8 name:NicO;
sprot_desc Putative nickel/cobalt efflux system MJ1092;
sprot_id sp|Q58492|Y1092_METJA;
sprot_target db:uniprot_sprot|sp|Q58492|Y1092_METJA 50 289 evalue:7.0e-07 qcov:82.50 identity:23.30;
tm_num 6;
32894 33769 transmembrane_helix
ID metaerg.pl|11771
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology o32999-33067i33128-33196o33224-33292i33470-33538o33566-33634i33671-33739o;
33766 34836 CDS
ID metaerg.pl|11772
allec_ids 3.5.1.2;
allgo_ids GO:0004359; GO:0006541;
allko_ids K01425;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Rubrobacteria;o__Rubrobacterales;f__Rubrobacteraceae;g__Rubrobacter_A;s__Rubrobacter_A aplysinae;
genomedb_acc GCF_001029505.1;
genomedb_target db:genomedb|GCF_001029505.1|WP_047865794.1 29 349 evalue:6.3e-96 qcov:90.20 identity:57.60;
kegg_pathway_id 00251; 00910; 00471;
kegg_pathway_name Glutamate metabolism; Nitrogen metabolism; D-Glutamine and D-glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
metacyc_pathway_id CITRULBIO-PWY; GLUTAMINDEG-PWY; PWY-5004;
metacyc_pathway_name L-citrulline biosynthesis;; L-glutamine degradation I;; superpathway of L-citrulline metabolism;;
metacyc_pathway_type Citrulline-Biosynthesis;; GLUTAMINE-DEG;; Citrulline-Biosynthesis; Super-Pathways;;
pfam_acc PF04960;
pfam_desc Glutaminase;
pfam_id Glutaminase;
pfam_target db:Pfam-A.hmm|PF04960.15 evalue:1.2e-105 score:352.0 best_domain_score:351.7 name:Glutaminase;
sprot_desc Glutaminase;
sprot_id sp|Q8YSZ5|GLSA_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YSZ5|GLSA_NOSS1 34 340 evalue:8.9e-81 qcov:86.20 identity:51.10;
tigrfam_acc TIGR03814;
tigrfam_desc glutaminase A;
tigrfam_mainrole Energy metabolism;
tigrfam_name Gln_ase;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR03814 evalue:2.3e-92 score:308.5 best_domain_score:308.2 name:TIGR03814;
34867 36162 CDS
ID metaerg.pl|11773
allec_ids 1.3.1.-;
allgo_ids GO:0016491; GO:0055114; GO:0006629;
allko_ids K12445;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666914.1 24 400 evalue:1.6e-114 qcov:87.50 identity:60.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
metacyc_pathway_id PWY-5063; PWY-5064; PWY-5863; PWY1A0-6325; PWY-6088; HCAMHPDEG-PWY; PWY-3481; PWY-5393; PWY-5466; PWY-5972; PWY-3461; PWY-5367; PWY-5729; PWY5F9-3233;
metacyc_pathway_name phytyl diphosphate biosynthesis;; chlorophyll a biosynthesis II;; superpathway of phylloquinol biosynthesis;; actinorhodin biosynthesis;; 3-chlorobenzoate degradation I (via chlorocatechol);; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; raspberry ketone biosynthesis;; matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);; L-tyrosine biosynthesis II;; petroselinate biosynthesis;; vestitol and sativan biosynthesis;; phthalate degradation (aerobic);;
metacyc_pathway_type Phytyl-Diphosphate-Biosynthesis;; Chlorophyll-a-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Antibiotic-Biosynthesis;; 3-Chlorobenzoate-Degradation;; Phenolic-Compounds-Degradation;; Amino-Acid-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; LIGNAN-SYN;; Stearate-Biosynthesis;; TYROSINE-SYN;; Unsaturated-Fatty-Acids-Biosynthesis;; ISOFLAVONOID-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;;
pfam_acc PF03435;
pfam_desc Saccharopine dehydrogenase NADP binding domain;
pfam_id Sacchrp_dh_NADP;
pfam_target db:Pfam-A.hmm|PF03435.18 evalue:1.5e-10 score:40.7 best_domain_score:40.1 name:Sacchrp_dh_NADP;
sprot_desc Trans-acting enoyl reductase;
sprot_id sp|A0PQ21|TAER_MYCUA;
sprot_target db:uniprot_sprot|sp|A0PQ21|TAER_MYCUA 24 394 evalue:3.3e-37 qcov:86.10 identity:33.70;
36172 36660 CDS
ID metaerg.pl|11774
allgo_ids GO:0003677; GO:0006355; GO:0051537; GO:0003700; GO:0003690; GO:0005506;
allko_ids K13643;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441206.1 1 158 evalue:2.2e-43 qcov:97.50 identity:59.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF03444; PF02082;
pfam_desc Winged helix-turn-helix transcription repressor, HrcA DNA-binding; Transcriptional regulator;
pfam_id HrcA_DNA-bdg; Rrf2;
pfam_target db:Pfam-A.hmm|PF03444.15 evalue:4.8e-05 score:22.2 best_domain_score:21.6 name:HrcA_DNA-bdg; db:Pfam-A.hmm|PF02082.20 evalue:2.4e-23 score:81.5 best_domain_score:81.1 name:Rrf2;
sprot_desc HTH-type transcriptional regulator IscR;
sprot_id sp|B6EGX4|ISCR_ALISL;
sprot_target db:uniprot_sprot|sp|B6EGX4|ISCR_ALISL 3 134 evalue:1.2e-13 qcov:81.50 identity:36.40;
tigrfam_acc TIGR00738;
tigrfam_desc Rrf2 family protein;
tigrfam_mainrole Unknown function;
tigrfam_name rrf2_super;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00738 evalue:2.4e-33 score:114.0 best_domain_score:113.7 name:TIGR00738;
36890 38155 CDS
ID metaerg.pl|11775
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664563.1 20 407 evalue:1.2e-101 qcov:92.20 identity:56.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
tm_num 12;
36890 38155 transmembrane_helix
ID metaerg.pl|11776
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i36953-37021o37049-37117i37151-37210o37223-37279i37340-37408o37436-37504i37565-37624o37652-37720i37757-37816o37844-37912i37973-38032o38060-38128i;
38240 40612 CDS
ID metaerg.pl|11777
allec_ids 1.2.4.1;
allgo_ids GO:0004739; GO:0006096;
allko_ids K00615; K00163;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora haikouensis;
genomedb_acc GCF_900091595.1;
genomedb_target db:genomedb|GCF_900091595.1|WP_091274783.1 13 790 evalue:0.0e+00 qcov:98.50 identity:74.80;
kegg_pathway_id 00290; 00710; 00030; 00010; 00020; 00620; 01051; 00252; 00650;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Carbon fixation in photosynthetic organisms; Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Pyruvate metabolism; Biosynthesis of ansamycins; Alanine and aspartate metabolism; Butanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
metacyc_pathway_id PWY-5173; PYRUVDEHYD-PWY; PWY-5464;
metacyc_pathway_name superpathway of acetyl-CoA biosynthesis;; pyruvate decarboxylation to acetyl CoA;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; Super-Pathways;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF17831; PF00456;
pfam_desc Pyruvate dehydrogenase E1 component middle domain; Transketolase, thiamine diphosphate binding domain;
pfam_id PDH_E1_M; Transketolase_N;
pfam_target db:Pfam-A.hmm|PF17831.1 evalue:6.1e-14 score:51.3 best_domain_score:50.6 name:PDH_E1_M; db:Pfam-A.hmm|PF00456.21 evalue:1.3e-16 score:59.7 best_domain_score:39.8 name:Transketolase_N;
sprot_desc Pyruvate dehydrogenase E1 component;
sprot_id sp|Q8NNF6|ODP1_CORGL;
sprot_target db:uniprot_sprot|sp|Q8NNF6|ODP1_CORGL 13 788 evalue:1.6e-45 qcov:98.20 identity:27.40;
40898 40647 CDS
ID metaerg.pl|11778
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
sp YES;
tm_num 1;
40647 40721 signal_peptide
ID metaerg.pl|11779
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
40898 40647 transmembrane_helix
ID metaerg.pl|11780
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i40665-40721o;
41151 41546 CDS
ID metaerg.pl|11781
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__UBA5794;g__UBA5794;s__UBA5794 sp002418265;
genomedb_acc GCA_002418265.1;
genomedb_target db:genomedb|GCA_002418265.1|DIDS01000007.1_55 2 122 evalue:6.0e-28 qcov:92.40 identity:49.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF07681; PF13564;
pfam_desc DoxX; DoxX-like family;
pfam_id DoxX; DoxX_2;
pfam_target db:Pfam-A.hmm|PF07681.12 evalue:5.1e-08 score:32.6 best_domain_score:32.6 name:DoxX; db:Pfam-A.hmm|PF13564.6 evalue:7.8e-20 score:70.2 best_domain_score:69.9 name:DoxX_2;
tm_num 4;
41151 41546 transmembrane_helix
ID metaerg.pl|11782
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i41163-41231o41274-41342i41361-41423o41436-41495i;
41879 42307 CDS
ID metaerg.pl|11783
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664699.1 14 140 evalue:2.6e-32 qcov:89.40 identity:64.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
43091 42534 CDS
ID metaerg.pl|11784
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__UBA5794;f__Bin76;g__Bin76;s__Bin76 sp002238785;
genomedb_acc GCA_002238785.1;
genomedb_target db:genomedb|GCA_002238785.1|MPNA01000005.1_93 1 181 evalue:2.4e-67 qcov:97.80 identity:68.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF01966;
pfam_desc HD domain;
pfam_id HD;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:1.3e-08 score:34.3 best_domain_score:33.9 name:HD;
44245 43088 CDS
ID metaerg.pl|11785
allec_ids 1.14.11.1;
allgo_ids GO:0016491; GO:0055114; GO:0005739; GO:0008336; GO:0005506; GO:0016702; GO:0008270; GO:0045329;
allko_ids K00471;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Nocardiopsis;s__Nocardiopsis kunsanensis;
genomedb_acc GCF_000340965.1;
genomedb_target db:genomedb|GCF_000340965.1|WP_017574603.1 7 385 evalue:7.2e-114 qcov:98.40 identity:54.00;
kegg_pathway_id 00310;
kegg_pathway_name Lysine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
metacyc_pathway_id PWY-6100;
metacyc_pathway_name L-carnitine biosynthesis;;
metacyc_pathway_type Metabolic-Regulators;;
pfam_acc PF06155; PF02668;
pfam_desc Protein of unknown function (DUF971); Taurine catabolism dioxygenase TauD, TfdA family;
pfam_id DUF971; TauD;
pfam_target db:Pfam-A.hmm|PF06155.12 evalue:3.9e-13 score:49.1 best_domain_score:48.1 name:DUF971; db:Pfam-A.hmm|PF02668.16 evalue:2.7e-35 score:121.7 best_domain_score:121.7 name:TauD;
sprot_desc Gamma-butyrobetaine dioxygenase;
sprot_id sp|Q9QZU7|BODG_RAT;
sprot_target db:uniprot_sprot|sp|Q9QZU7|BODG_RAT 17 368 evalue:4.1e-39 qcov:91.40 identity:28.60;
44377 45246 CDS
ID metaerg.pl|11786
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Ilumatobacteraceae;g__UBA668;s__UBA668 sp002299395;
genomedb_acc GCA_002299395.1;
genomedb_target db:genomedb|GCA_002299395.1|DBNQ01000185.1_8 8 267 evalue:1.6e-28 qcov:90.00 identity:37.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF00126;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family;
pfam_id HTH_1;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:5.5e-19 score:67.1 best_domain_score:66.2 name:HTH_1;
45604 46314 CDS
ID metaerg.pl|11787
allec_ids 2.1.1.-;
allgo_ids GO:0008171;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441071.1 7 234 evalue:2.0e-42 qcov:96.60 identity:49.30;
kegg_pathway_id 00450; 00626; 00350; 00150; 00380; 00340;
kegg_pathway_name Selenoamino acid metabolism; Naphthalene and anthracene degradation; Tyrosine metabolism; Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
metacyc_pathway_id ALL-CHORISMATE-PWY; PWY-3542; PWY-6153; PWY-5041; PWY-4021; CODH-PWY; PWY-6575; PWY-6442; PWY-6477; PWY-5467; PWY-1422; PWYG-321; PWY-5305; PWY-5729; PWY-6113; PWY-5975; PWY-5864; PWY-1061; PWY-5876; PWY-5856; PWY-6154; PWY-6424; UBISYN-PWY; PWY-6142; METH-ACETATE-PWY; PWY-5857; PWY-6303; PWY-6151; PWY-5209; PWY-5855; PWY-5479; PWY-5987; PWY-6292; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-6395; PWY-6427; PWY-6146; PWY-5328; METHIONINE-DEG1-PWY; PWY-6519; PWY-5773; PWY-5116; PWY-1581; CO2FORM-PWY;
metacyc_pathway_name superpathway of chorismate metabolism;; choline biosynthesis II;; autoinducer AI-2 biosynthesis I;; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; gibberellin inactivation II (methylation);; gramine biosynthesis;; vitamin E biosynthesis (tocopherols);; mycolate biosynthesis;; bixin biosynthesis;; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; ubiquinol-9 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; methanogenesis from acetate;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; S-adenosyl-L-methionine cycle I;; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; biotin biosynthesis I;; xanthohumol biosynthesis;; superpathway of seleno-compound metabolism;; rot-2'-enonate biosynthesis;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;;
metacyc_pathway_type Super-Pathways;; Choline-Biosynthesis;; Autoinducer-Biosynthesis;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; Autotrophic-CO2-Fixation;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; Fatty-acid-biosynthesis;; APOCAROTENOID-SYN;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; S-adenosyl-L-methionine-cycle; Super-Pathways;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; LIGNAN-SYN;; QUINONE-SYN;; CYSTEINE-SYN; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Rotenoids-Biosynthesis;; Biosynthesis; Super-Pathways;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;;
pfam_acc PF13578; PF01596;
pfam_desc Methyltransferase domain; O-methyltransferase;
pfam_id Methyltransf_24; Methyltransf_3;
pfam_target db:Pfam-A.hmm|PF13578.6 evalue:4.3e-11 score:43.0 best_domain_score:42.1 name:Methyltransf_24; db:Pfam-A.hmm|PF01596.17 evalue:1.8e-13 score:49.4 best_domain_score:46.3 name:Methyltransf_3;
sprot_desc Putative O-methyltransferase Mmcs_3995;
sprot_id sp|Q1B4T4|Y3995_MYCSS;
sprot_target db:uniprot_sprot|sp|Q1B4T4|Y3995_MYCSS 25 231 evalue:4.2e-26 qcov:87.70 identity:39.30;
46412 46921 CDS
ID metaerg.pl|11788
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667639.1 6 155 evalue:3.8e-43 qcov:88.80 identity:58.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF01243; PF16242;
pfam_desc Pyridoxamine 5'-phosphate oxidase; Pyridoxamine 5'-phosphate oxidase like;
pfam_id Putative_PNPOx; Pyrid_ox_like;
pfam_target db:Pfam-A.hmm|PF01243.20 evalue:3e-05 score:23.4 best_domain_score:22.8 name:Putative_PNPOx; db:Pfam-A.hmm|PF16242.5 evalue:1.7e-32 score:111.3 best_domain_score:111.1 name:Pyrid_ox_like;
47573 47995 CDS
ID metaerg.pl|11789
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Microbacteriaceae;g__Cnuibacter;s__Cnuibacter physcomitrellae;
genomedb_acc GCF_002096055.1;
genomedb_target db:genomedb|GCF_002096055.1|WP_085021368.1 3 137 evalue:7.1e-35 qcov:96.40 identity:54.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
50233 48071 CDS
ID metaerg.pl|11790
allko_ids K01181; K01448; K01225; K01179; K01183;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441163.1 8 709 evalue:2.8e-292 qcov:97.50 identity:72.60;
kegg_pathway_id 00500; 00530; 00550;
kegg_pathway_name Starch and sucrose metabolism; Aminosugars metabolism; Peptidoglycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF00395;
pfam_desc S-layer homology domain;
pfam_id SLH;
pfam_target db:Pfam-A.hmm|PF00395.20 evalue:2.2e-23 score:81.2 best_domain_score:46.0 name:SLH;
sp YES;
tm_num 1;
48071 48169 signal_peptide
ID metaerg.pl|11791
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
50233 48071 transmembrane_helix
ID metaerg.pl|11792
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i48107-48175o;
51433 50378 CDS
ID metaerg.pl|11793
allgo_ids GO:0008146;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF00685; PF13469;
pfam_desc Sulfotransferase domain; Sulfotransferase family;
pfam_id Sulfotransfer_1; Sulfotransfer_3;
pfam_target db:Pfam-A.hmm|PF00685.27 evalue:8.4e-10 score:37.8 best_domain_score:37.1 name:Sulfotransfer_1; db:Pfam-A.hmm|PF13469.6 evalue:7.2e-12 score:45.4 best_domain_score:35.0 name:Sulfotransfer_3;
53508 51655 CDS
ID metaerg.pl|11794
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Dermatophilaceae;g__Ornithinimicrobium;s__Ornithinimicrobium pekingense_A;
genomedb_acc GCF_900221015.1;
genomedb_target db:genomedb|GCF_900221015.1|WP_097189208.1 9 612 evalue:1.6e-224 qcov:97.90 identity:65.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF08309;
pfam_desc LVIVD repeat;
pfam_id LVIVD;
pfam_target db:Pfam-A.hmm|PF08309.11 evalue:3e-06 score:25.7 best_domain_score:16.0 name:LVIVD;
sp YES;
tm_num 1;
51655 51768 signal_peptide
ID metaerg.pl|11795
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
53508 51655 transmembrane_helix
ID metaerg.pl|11796
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i51709-51768o;
54154 59163 CDS
ID metaerg.pl|11797
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__Georgenia_A;s__Georgenia_A satyanarayanai;
genomedb_acc GCA_900116375.1;
genomedb_target db:genomedb|GCA_900116375.1|SSA36704.1 4 1614 evalue:0.0e+00 qcov:96.50 identity:44.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF06439; PF07081; PF17851; PF07995;
pfam_desc Domain of Unknown Function (DUF1080); Protein of unknown function (DUF1349); Beta xylosidase C-terminal Concanavalin A-like domain ; Glucose / Sorbosone dehydrogenase;
pfam_id DUF1080; DUF1349; GH43_C2; GSDH;
pfam_target db:Pfam-A.hmm|PF06439.11 evalue:6.6e-65 score:217.9 best_domain_score:108.4 name:DUF1080; db:Pfam-A.hmm|PF07081.11 evalue:6.5e-24 score:83.8 best_domain_score:40.8 name:DUF1349; db:Pfam-A.hmm|PF17851.1 evalue:3e-33 score:114.5 best_domain_score:57.4 name:GH43_C2; db:Pfam-A.hmm|PF07995.11 evalue:2.1e-35 score:121.8 best_domain_score:116.4 name:GSDH;
sp YES;
tm_num 1;
54154 54234 signal_peptide
ID metaerg.pl|11798
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
54154 59163 transmembrane_helix
ID metaerg.pl|11799
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i54172-54231o;
59394 60134 CDS
ID metaerg.pl|11800
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0003677;
allko_ids K00825; K03710;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667568.1 5 235 evalue:7.0e-86 qcov:93.90 identity:71.00;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF00392; PF07702;
pfam_desc Bacterial regulatory proteins, gntR family; UTRA domain;
pfam_id GntR; UTRA;
pfam_target db:Pfam-A.hmm|PF00392.21 evalue:1e-16 score:59.6 best_domain_score:58.8 name:GntR; db:Pfam-A.hmm|PF07702.13 evalue:5.4e-39 score:132.5 best_domain_score:132.0 name:UTRA;
sprot_desc HTH-type transcriptional repressor DasR;
sprot_id sp|Q82IW0|DASR_STRAW;
sprot_target db:uniprot_sprot|sp|Q82IW0|DASR_STRAW 7 233 evalue:8.4e-46 qcov:92.30 identity:42.70;
60131 61087 CDS
ID metaerg.pl|11801
allec_ids 2.7.1.-;
allgo_ids GO:0005737; GO:0005524; GO:0019200; GO:0045127; GO:0046835; GO:0006044; GO:0097172; GO:0009254;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667569.1 1 311 evalue:3.4e-77 qcov:97.80 identity:54.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
metacyc_pathway_id LIPA-CORESYN-PWY; PWY-6577; PWY0-1261; PWY-5107; PLPSAL-PWY; LPSSYN-PWY; PWY0-845; PWY0-163; PWY-5381; P1-PWY;
metacyc_pathway_name lipid A-core biosynthesis (E. coli K-12);; farnesylcysteine salvage pathway;; anhydromuropeptides recycling I;; phytol salvage pathway;; pyridoxal 5'-phosphate salvage I;; superpathway of lipopolysaccharide biosynthesis;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;; ; pyridine nucleotide cycling (plants);; ;
metacyc_pathway_type Glycan-Biosynthesis; Lipid-Biosynthesis;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Anhydromuropeptides-Recycling;; DITERPENOID-SYN;; Vitamin-B6-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;; Super-Pathways; Vitamin-B6-Biosynthesis;; ; NAD-Metabolism;; ;
pfam_acc PF01869;
pfam_desc BadF/BadG/BcrA/BcrD ATPase family;
pfam_id BcrAD_BadFG;
pfam_target db:Pfam-A.hmm|PF01869.20 evalue:8.3e-18 score:64.1 best_domain_score:63.8 name:BcrAD_BadFG;
sprot_desc N-acetylmuramic acid/N-acetylglucosamine kinase;
sprot_id sp|Q97ML3|MURK_CLOAB;
sprot_target db:uniprot_sprot|sp|Q97ML3|MURK_CLOAB 6 300 evalue:1.8e-16 qcov:92.80 identity:26.20;
61084 61815 CDS
ID metaerg.pl|11802
allgo_ids GO:0097367; GO:1901135;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces aurantiacus;
genomedb_acc GCF_001418335.1;
genomedb_target db:genomedb|GCF_001418335.1|WP_063792924.1 3 242 evalue:9.4e-51 qcov:98.80 identity:53.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF13580;
pfam_desc SIS domain;
pfam_id SIS_2;
pfam_target db:Pfam-A.hmm|PF13580.6 evalue:3.7e-34 score:117.0 best_domain_score:116.4 name:SIS_2;
sprot_desc hypothetical protein;
sprot_id sp|C1KZJ2|Y2611_LISMC;
sprot_target db:uniprot_sprot|sp|C1KZJ2|Y2611_LISMC 19 242 evalue:2.1e-33 qcov:92.20 identity:38.10;
61812 63044 CDS
ID metaerg.pl|11803
allec_ids 3.5.1.25;
allgo_ids GO:0016787; GO:0005506; GO:0047419; GO:0008448; GO:0042803; GO:0005975; GO:0006046; GO:0019262;
allko_ids K02079; K01443;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667570.1 1 391 evalue:2.2e-140 qcov:95.40 identity:67.80;
kegg_pathway_id 00530; 00052;
kegg_pathway_name Aminosugars metabolism; Galactose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
metacyc_pathway_id GLUAMCAT-PWY; PWY-6517; P441-PWY;
metacyc_pathway_name N-acetylglucosamine degradation I;; N-acetylglucosamine degradation II;; superpathway of N-acetylneuraminate degradation;;
metacyc_pathway_type N-Acetylglucosamine-Degradation;; N-Acetylglucosamine-Degradation; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:1.9e-21 score:76.0 best_domain_score:75.5 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:1.5e-08 score:33.7 best_domain_score:20.5 name:Amidohydro_3;
sprot_desc N-acetylglucosamine-6-phosphate deacetylase;
sprot_id sp|Q84F86|NAGA_LYSSH;
sprot_target db:uniprot_sprot|sp|Q84F86|NAGA_LYSSH 55 388 evalue:4.2e-58 qcov:81.50 identity:38.10;
tigrfam_acc TIGR00221;
tigrfam_desc N-acetylglucosamine-6-phosphate deacetylase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name nagA;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR00221 evalue:3.2e-86 score:288.8 best_domain_score:288.6 name:TIGR00221;
63110 64456 CDS
ID metaerg.pl|11804
allko_ids K02027;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667571.1 1 447 evalue:2.9e-199 qcov:99.80 identity:74.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF01547; PF13416;
pfam_desc Bacterial extracellular solute-binding protein; Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_1; SBP_bac_8;
pfam_target db:Pfam-A.hmm|PF01547.25 evalue:1.9e-27 score:96.3 best_domain_score:95.7 name:SBP_bac_1; db:Pfam-A.hmm|PF13416.6 evalue:3.4e-31 score:108.3 best_domain_score:107.7 name:SBP_bac_8;
sp YES;
63110 63169 lipoprotein_signal_peptide
ID metaerg.pl|11805
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
64609 65550 CDS
ID metaerg.pl|11806
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0008643;
allko_ids K10109; K02025;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW09269.1 10 313 evalue:6.7e-134 qcov:97.10 identity:78.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.6e-17 score:63.1 best_domain_score:63.1 name:BPD_transp_1;
sprot_desc Lactose transport system permease protein LacF;
sprot_id sp|P29823|LACF_RHIRD;
sprot_target db:uniprot_sprot|sp|P29823|LACF_RHIRD 16 307 evalue:3.3e-23 qcov:93.30 identity:26.10;
tm_num 6;
64609 65550 transmembrane_helix
ID metaerg.pl|11807
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i64693-64761o64891-64959i64993-65061o65119-65187i65248-65316o65452-65520i;
65593 66486 CDS
ID metaerg.pl|11808
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0008643;
allko_ids K02026; K17236;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441731.1 1 297 evalue:8.9e-128 qcov:100.00 identity:81.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.2e-11 score:44.0 best_domain_score:42.3 name:BPD_transp_1;
sprot_desc L-arabinose transport system permease protein AraQ;
sprot_id sp|Q9KEE9|ARAQ_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KEE9|ARAQ_BACHD 43 297 evalue:3.6e-27 qcov:85.90 identity:30.20;
tm_num 6;
65593 66486 transmembrane_helix
ID metaerg.pl|11809
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i65683-65751o65881-65949i65962-66030o66073-66141i66202-66270o66376-66444i;
66483 67517 CDS
ID metaerg.pl|11810
allec_ids 1.1.1.292;
allgo_ids GO:0016491; GO:0033712;
allko_ids K13016; K19181;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Saccharomonospora;s__Saccharomonospora cyanea;
genomedb_acc GCF_000244975.1;
genomedb_target db:genomedb|GCF_000244975.1|WP_005458035.1 2 331 evalue:3.7e-109 qcov:95.90 identity:63.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF01408; PF02894;
pfam_desc Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain;
pfam_id GFO_IDH_MocA; GFO_IDH_MocA_C;
pfam_target db:Pfam-A.hmm|PF01408.22 evalue:7e-27 score:93.9 best_domain_score:93.6 name:GFO_IDH_MocA; db:Pfam-A.hmm|PF02894.17 evalue:6.9e-08 score:31.7 best_domain_score:30.7 name:GFO_IDH_MocA_C;
sp YES;
sprot_desc 1,5-anhydro-D-fructose reductase;
sprot_id sp|Q2I8V6|AFR_ENSAD;
sprot_target db:uniprot_sprot|sp|Q2I8V6|AFR_ENSAD 1 323 evalue:8.5e-20 qcov:93.90 identity:27.80;
66483 66539 signal_peptide
ID metaerg.pl|11811
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
67529 68509 CDS
ID metaerg.pl|11812
allec_ids 1.1.1.-;
allgo_ids GO:0016491; GO:0046872; GO:0000166; GO:0005975;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667572.1 1 324 evalue:1.2e-128 qcov:99.40 identity:70.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
metacyc_pathway_id PWY-6577; TOLSULFDEG-PWY; PWY-5048; ECASYN-PWY; PWY-5789; PWY-481; PWY-882; PWY-5327; PWY-6419; SUCROSEUTIL2-PWY; PWY-1186; PWY1A0-6325; PWY-6516; PWY-321; 4TOLCARBDEG-PWY; CENTBENZCOA-PWY; LYSDEGII-PWY; PWY-6575; PWY-6501; PWY-5197; PWY-5184; BENZCOA-PWY; P302-PWY; PWY-5516; PWY-5392; PWY-5195; PWY-5466; PWY-5972;
metacyc_pathway_name farnesylcysteine salvage pathway;; 4-toluenesulfonate degradation I;; rosmarinic acid biosynthesis I;; enterobacterial common antigen biosynthesis;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; ethylbenzene degradation (anaerobic);; L-ascorbate biosynthesis I (L-galactose pathway);; superpathway of L-lysine degradation;; shikimate degradation II;; sucrose degradation VII (sucrose 3-dehydrogenase);; L-homomethionine biosynthesis;; actinorhodin biosynthesis;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; cutin biosynthesis;; 4-toluenecarboxylate degradation;; benzoyl-CoA degradation II (anaerobic);; L-lysine degradation III;; juvenile hormone III biosynthesis I;; D-glucuronate degradation II;; lactate biosynthesis (archaea);; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; L-sorbose degradation;; D-xylose degradation II;; reductive TCA cycle II;; artemisinin and arteannuin B biosynthesis;; matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);;
metacyc_pathway_type All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; 4-Toluenesulfonate-Degradation;; Rosmarinate-Biosynthesis;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;; AROMATIC-COMPOUNDS-DEGRADATION;; Ascorbate-Biosynthesis;; LYSINE-DEG; Super-Pathways;; Shikimate-Degradation;; SUCROSE-DEG;; Other-Amino-Acid-Biosynthesis;; Antibiotic-Biosynthesis;; Sugar-Derivatives; Super-Pathways;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Benzoyl-CoA-Degradation;; LYSINE-DEG;; HORMONE-SYN; JH-III-Biosynthesis;; D-Glucuronate-Degradation;; Energy-Metabolism;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Sugars-And-Polysaccharides-Degradation;; Xylose-Degradation;; Reductive-TCA-Cycles;; SESQUITERPENE-LACTONE;; LIGNAN-SYN;; Stearate-Biosynthesis;;
pfam_acc PF01408; PF02894;
pfam_desc Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain;
pfam_id GFO_IDH_MocA; GFO_IDH_MocA_C;
pfam_target db:Pfam-A.hmm|PF01408.22 evalue:3.3e-13 score:49.8 best_domain_score:49.2 name:GFO_IDH_MocA; db:Pfam-A.hmm|PF02894.17 evalue:3.6e-07 score:29.4 best_domain_score:28.7 name:GFO_IDH_MocA_C;
sprot_desc D-apiose dehydrogenase;
sprot_id sp|B1G894|APSD_PARG4;
sprot_target db:uniprot_sprot|sp|B1G894|APSD_PARG4 20 324 evalue:5.2e-19 qcov:93.60 identity:26.30;
68506 69582 CDS
ID metaerg.pl|11813
allec_ids 2.6.1.16;
allgo_ids GO:0097367; GO:1901135; GO:0005737; GO:0004360; GO:1901137; GO:0005975; GO:0006541;
allko_ids K00820;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__20CM-4-69-9;f__20CM-4-69-9;g__Palsa-739;s__Palsa-739 sp003139545;
genomedb_acc GCA_003139545.1;
genomedb_target db:genomedb|GCA_003139545.1|PLJC01000016.1_95 7 357 evalue:8.9e-82 qcov:98.00 identity:51.90;
kegg_pathway_id 00530; 00251;
kegg_pathway_name Aminosugars metabolism; Glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
metacyc_pathway_id PWY-6404; UDPNAGSYN-PWY; UDPNACETYLGALSYN-PWY; OANTIGEN-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; UDP-N-acetyl-D-glucosamine biosynthesis I;; UDP-N-acetyl-D-glucosamine biosynthesis II;; O-antigen building blocks biosynthesis (E. coli);;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; UDP-NAc-Glucosamine-Biosynthesis;; UDP-NAc-Glucosamine-Biosynthesis;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;;
pfam_acc PF01380;
pfam_desc SIS domain;
pfam_id SIS;
pfam_target db:Pfam-A.hmm|PF01380.22 evalue:4.8e-29 score:100.1 best_domain_score:61.4 name:SIS;
sprot_desc Glutamine--fructose-6-phosphate aminotransferase [isomerizing];
sprot_id sp|Q8TZ14|GLMS_METKA;
sprot_target db:uniprot_sprot|sp|Q8TZ14|GLMS_METKA 11 353 evalue:8.5e-39 qcov:95.80 identity:34.70;
69654 70610 CDS
ID metaerg.pl|11814
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
tm_num 3;
69654 70610 transmembrane_helix
ID metaerg.pl|11815
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology o69681-69740i69777-69845o69873-69941i;
70621 70917 CDS
ID metaerg.pl|11816
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441728.1 2 96 evalue:2.8e-30 qcov:96.90 identity:64.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF11238;
pfam_desc Protein of unknown function (DUF3039);
pfam_id DUF3039;
pfam_target db:Pfam-A.hmm|PF11238.8 evalue:5.5e-21 score:73.3 best_domain_score:73.3 name:DUF3039;
71030 72019 CDS
ID metaerg.pl|11817
allec_ids 1.-.-.-;
allgo_ids GO:0005829; GO:0016491;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas marina;
genomedb_acc GCF_900111925.1;
genomedb_target db:genomedb|GCF_900111925.1|WP_090034733.1 1 329 evalue:1.5e-123 qcov:100.00 identity:71.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
metacyc_pathway_id PWY-5826; PWY-2821; PWY-5271; PWY-4302; PWYG-321; PWY-6113; PWY-5479; PWY-5987; PWY-5469;
metacyc_pathway_name hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; sesamin biosynthesis;;
metacyc_pathway_type SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;;
pfam_acc PF00248;
pfam_desc Aldo/keto reductase family;
pfam_id Aldo_ket_red;
pfam_target db:Pfam-A.hmm|PF00248.21 evalue:1.9e-63 score:213.6 best_domain_score:213.5 name:Aldo_ket_red;
sp YES;
sprot_desc Uncharacterized oxidoreductase YccK;
sprot_id sp|P46905|YCCK_BACSU;
sprot_target db:uniprot_sprot|sp|P46905|YCCK_BACSU 2 302 evalue:1.9e-32 qcov:91.50 identity:33.70;
71030 71086 lipoprotein_signal_peptide
ID metaerg.pl|11818
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
72132 75149 CDS
ID metaerg.pl|11819
allec_ids 2.4.1.332; 5.4.2.6;
allgo_ids GO:0003824; GO:0005975; GO:0030246; GO:0046872; GO:0016757;
allko_ids K10231; K01194; K00691; K01838; K05344; K03731; K21355;
genomedb_OC d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Spirochaetales;f__Alkalispirochaetaceae;g__Alkalispirochaeta;s__Alkalispirochaeta americana;
genomedb_acc GCF_900156105.1;
genomedb_target db:genomedb|GCF_900156105.1|WP_083943797.1 237 1000 evalue:1.3e-210 qcov:76.00 identity:48.90;
kegg_pathway_id 00500; 00010;
kegg_pathway_name Starch and sucrose metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
metacyc_pathway_id PWY-5114; PWY-2721; PWY-6317; MALTOSECAT-PWY; PWY-2722;
metacyc_pathway_name UDP-sugars interconversion;; trehalose degradation III;; D-galactose degradation I (Leloir pathway);; maltose degradation;; trehalose degradation IV;;
metacyc_pathway_type Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; Trehalose-Degradation;; GALACTOSE-DEGRADATION;; Sugars-And-Polysaccharides-Degradation;; Trehalose-Degradation;;
pfam_acc PF03633; PF03632; PF03636; PF13419; PF00702;
pfam_desc Glycosyl hydrolase family 65, C-terminal domain ; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain ; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase;
pfam_id Glyco_hydro_65C; Glyco_hydro_65m; Glyco_hydro_65N; HAD_2; Hydrolase;
pfam_target db:Pfam-A.hmm|PF03633.15 evalue:2.5e-12 score:45.8 best_domain_score:44.1 name:Glyco_hydro_65C; db:Pfam-A.hmm|PF03632.15 evalue:7.7e-93 score:310.6 best_domain_score:310.0 name:Glyco_hydro_65m; db:Pfam-A.hmm|PF03636.15 evalue:3e-26 score:91.7 best_domain_score:90.9 name:Glyco_hydro_65N; db:Pfam-A.hmm|PF13419.6 evalue:2.5e-21 score:75.8 best_domain_score:75.2 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:1.9e-14 score:53.7 best_domain_score:50.8 name:Hydrolase;
sprot_desc 1,2-alpha-glucosylglycerol phosphorylase;
sprot_id sp|D6XZ22|GGP_BACIE;
sprot_target db:uniprot_sprot|sp|D6XZ22|GGP_BACIE 225 981 evalue:6.6e-190 qcov:75.30 identity:46.10;
tigrfam_acc TIGR01509; TIGR01990; TIGR02009;
tigrfam_desc HAD hydrolase, family IA, variant 3; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase;
tigrfam_mainrole Unknown function; Energy metabolism;
tigrfam_name HAD-SF-IA-v3; bPGM; PGMB-YQAB-SF;
tigrfam_sub1role Enzymes of unknown specificity; Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:1.8e-17 score:63.1 best_domain_score:52.8 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01990 evalue:7.6e-68 score:227.3 best_domain_score:226.2 name:TIGR01990; db:TIGRFAMs.hmm|TIGR02009 evalue:2.7e-57 score:193.1 best_domain_score:191.0 name:TIGR02009;
75276 75689 CDS
ID metaerg.pl|11820
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
tm_num 4;
75276 75689 transmembrane_helix
ID metaerg.pl|11821
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
topology i75312-75380o75423-75491i75504-75572o75600-75668i;
76574 75705 CDS
ID metaerg.pl|11822
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667557.1 22 277 evalue:7.1e-90 qcov:88.60 identity:67.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
pfam_acc PF11296;
pfam_desc Protein of unknown function (DUF3097);
pfam_id DUF3097;
pfam_target db:Pfam-A.hmm|PF11296.8 evalue:8.7e-104 score:345.8 best_domain_score:345.5 name:DUF3097;
77361 76585 CDS
ID metaerg.pl|11823
genomedb_OC d__Bacteria;p__Actinobacteriota;c__UBA4738;o__UBA4738;f__UBA4738;g__UBA4738;s__UBA4738 sp002413305;
genomedb_acc GCA_002413305.1;
genomedb_target db:genomedb|GCA_002413305.1|DHWS01000157.1_23 5 251 evalue:7.9e-64 qcov:95.70 identity:54.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
78815 77358 CDS
ID metaerg.pl|11824
allec_ids 3.4.11.2;
allgo_ids GO:0008237; GO:0008270; GO:0005737; GO:0004177;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667555.1 1 483 evalue:2.1e-187 qcov:99.60 identity:70.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.113774; 26.4285; 0.0539757; 0.122049; 26.1387;
metacyc_pathway_id PWY-4061; PWY-4041;
metacyc_pathway_name glutathione-mediated detoxification I;; γ-glutamyl cycle;;
metacyc_pathway_type Detoxification; Other-Degradation;; Reductants; Super-Pathways;;
pfam_acc PF11838; PF01433;
pfam_desc ERAP1-like C-terminal domain; Peptidase family M1 domain;
pfam_id ERAP1_C; Peptidase_M1;
pfam_target db:Pfam-A.hmm|PF11838.8 evalue:3.8e-52 score:177.0 best_domain_score:177.0 name:ERAP1_C; db:Pfam-A.hmm|PF01433.20 evalue:3.7e-11 score:42.3 best_domain_score:41.7 name:Peptidase_M1;
sprot_desc Aminopeptidase N;
sprot_id sp|Q11010|AMPN_STRLI;
sprot_target db:uniprot_sprot|sp|Q11010|AMPN_STRLI 3 483 evalue:6.0e-112 qcov:99.20 identity:49.20;
>Feature NODE_90_length_78708_cov_45.5734
1367 171 CDS
ID metaerg.pl|11825
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194655.1 1 391 evalue:4.3e-202 qcov:98.20 identity:90.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF17170; PF01436; PF08450;
pfam_desc 6-bladed beta-propeller; NHL repeat; SMP-30/Gluconolactonase/LRE-like region;
pfam_id DUF5128; NHL; SGL;
pfam_target db:Pfam-A.hmm|PF17170.4 evalue:8.8e-18 score:63.8 best_domain_score:33.5 name:DUF5128; db:Pfam-A.hmm|PF01436.21 evalue:5.2e-11 score:41.3 best_domain_score:21.7 name:NHL; db:Pfam-A.hmm|PF08450.12 evalue:7.9e-09 score:34.7 best_domain_score:16.1 name:SGL;
sp YES;
tigrfam_acc TIGR02595;
tigrfam_desc PEP-CTERM protein-sorting domain;
tigrfam_mainrole Cell envelope;
tigrfam_name PEP_exosort;
tigrfam_sub1role Surface structures;
tigrfam_target db:TIGRFAMs.hmm|TIGR02595 evalue:0.0024 score:17.8 best_domain_score:17.8 name:TIGR02595;
tm_num 1;
171 251 signal_peptide
ID metaerg.pl|11826
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
1367 171 transmembrane_helix
ID metaerg.pl|11827
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i189-257o;
2757 1474 CDS
ID metaerg.pl|11828
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_B;s__Tolypothrix_B sp002368235;
genomedb_acc GCF_002368235.1;
genomedb_target db:genomedb|GCF_002368235.1|WP_073632898.1 5 419 evalue:1.7e-119 qcov:97.20 identity:52.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF01436;
pfam_desc NHL repeat;
pfam_id NHL;
pfam_target db:Pfam-A.hmm|PF01436.21 evalue:1.9e-05 score:23.7 best_domain_score:10.9 name:NHL;
sp YES;
tigrfam_acc TIGR02595;
tigrfam_desc PEP-CTERM protein-sorting domain;
tigrfam_mainrole Cell envelope;
tigrfam_name PEP_exosort;
tigrfam_sub1role Surface structures;
tigrfam_target db:TIGRFAMs.hmm|TIGR02595 evalue:9.8e-05 score:22.1 best_domain_score:20.8 name:TIGR02595;
1474 1551 signal_peptide
ID metaerg.pl|11829
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
4144 2882 CDS
ID metaerg.pl|11830
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194658.1 1 419 evalue:6.1e-191 qcov:99.80 identity:81.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
sp YES;
2882 2959 signal_peptide
ID metaerg.pl|11831
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
5180 4209 CDS
ID metaerg.pl|11832
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194659.1 1 323 evalue:4.3e-184 qcov:100.00 identity:94.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
6272 5211 CDS
ID metaerg.pl|11833
allec_ids 1.4.1.9;
allgo_ids GO:0051287; GO:0055114; GO:0050049; GO:0006552;
allko_ids K00261; K00270; K00263;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194660.1 1 353 evalue:1.0e-183 qcov:100.00 identity:91.20;
kegg_pathway_id 00280; 00290; 00400; 00910; 00330; 00251; 00471; 00360;
kegg_pathway_name Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Nitrogen metabolism; Arginine and proline metabolism; Glutamate metabolism; D-Glutamine and D-glutamate metabolism; Phenylalanine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF02826; PF00208; PF02812; PF03446;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; NAD binding domain of 6-phosphogluconate dehydrogenase;
pfam_id 2-Hacid_dh_C; ELFV_dehydrog; ELFV_dehydrog_N; NAD_binding_2;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:1.1e-06 score:27.4 best_domain_score:26.4 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF00208.21 evalue:6.1e-19 score:67.9 best_domain_score:41.2 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:6.5e-23 score:80.3 best_domain_score:79.3 name:ELFV_dehydrog_N; db:Pfam-A.hmm|PF03446.15 evalue:3.3e-06 score:26.6 best_domain_score:25.5 name:NAD_binding_2;
sprot_desc Leucine dehydrogenase;
sprot_id sp|P0A393|DHLE_BACCE;
sprot_target db:uniprot_sprot|sp|P0A393|DHLE_BACCE 3 351 evalue:2.7e-98 qcov:98.90 identity:49.30;
8474 6588 CDS
ID metaerg.pl|11834
allec_ids 2.2.1.6;
allgo_ids GO:0003824; GO:0030976; GO:0003984; GO:0050660; GO:0000287; GO:0009097; GO:0009099;
allko_ids K04103; K01576; K01652;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194661.1 1 628 evalue:0.0e+00 qcov:100.00 identity:91.70;
kegg_pathway_id 00290; 00622; 00362; 00770; 00380; 00660; 00650;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Toluene and xylene degradation; Benzoate degradation via hydroxylation; Pantothenate and CoA biosynthesis; Tryptophan metabolism; C5-Branched dibasic acid metabolism; Butanoate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
metacyc_pathway_id VALSYN-PWY; PWY-5101; PWY-3001; PWY-5938; THREOCAT-PWY; PWY-5103; PWY-6396; PWY-5104; PWY-6389; BRANCHED-CHAIN-AA-SYN-PWY; ILEUSYN-PWY; PWY-5939;
metacyc_pathway_name L-valine biosynthesis;; L-isoleucine biosynthesis II;; superpathway of L-isoleucine biosynthesis I;; pyruvate fermentation to (R)-acetoin I;; superpathway of L-threonine metabolism;; L-isoleucine biosynthesis III;; superpathway of 2,3-butanediol biosynthesis;; L-isoleucine biosynthesis IV;; pyruvate fermentation to (S)-acetoin;; superpathway of branched chain amino acid biosynthesis;; L-isoleucine biosynthesis I (from threonine);; pyruvate fermentation to (R)-acetoin II;;
metacyc_pathway_type VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; Acetoin-Biosynthesis;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN;; Butanediol-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;;
pfam_acc PF02775; PF00205; PF02776;
pfam_desc Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain;
pfam_id TPP_enzyme_C; TPP_enzyme_M; TPP_enzyme_N;
pfam_target db:Pfam-A.hmm|PF02775.21 evalue:8.8e-28 score:96.3 best_domain_score:96.3 name:TPP_enzyme_C; db:Pfam-A.hmm|PF00205.22 evalue:9.5e-21 score:73.2 best_domain_score:72.1 name:TPP_enzyme_M; db:Pfam-A.hmm|PF02776.18 evalue:1.3e-37 score:128.3 best_domain_score:126.3 name:TPP_enzyme_N;
sprot_desc Probable acetolactate synthase large subunit;
sprot_id sp|Q57725|ILVB_METJA;
sprot_target db:uniprot_sprot|sp|Q57725|ILVB_METJA 60 602 evalue:9.6e-46 qcov:86.50 identity:27.60;
9854 11827 CDS
ID metaerg.pl|11835
allgo_ids GO:0000155; GO:0007165;
allko_ids K02491; K01090; K11231; K07643; K07704; K10909; K08282; K07708; K07677; K07645; K11356; K11640; K04486; K02484; K07642; K11711; K11623; K07651; K07698; K07718; K02478; K07679; K07648; K08884; K07711; K00873; K11328; K13533; K11354; K07683; K07778; K07768; K11633; K07652; K07646; K07641; K13598; K01120; K07673; K08475; K07639; K03407; K07637; K07654; K07777; K00936; K07649; K07682; K07717; K07675; K07647; K07680; K10942; K13040; K04757; K11617; K11357; K10125; K02342; K11629; K02486; K11383; K12767; K07769; K14509; K11520; K07644; K13532; K07709; K07650; K10681; K07676; K06379; K01769; K07678; K10715; K13587; K02030; K11527; K07653; K07638; K07636; K14489; K08801; K02482; K02480; K07640; K07710; K01768; K07656; K02489; K07697; K07716; K08479; K07674; K10916; K02668; K03388;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091330.1 1 655 evalue:0.0e+00 qcov:99.70 identity:85.60;
kegg_pathway_id 00010; 00710; 05111; 00230; 03030; 04011; 02020; 03090; 00620; 00790; 00340;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Vibrio cholerae pathogenic cycle; Purine metabolism; DNA replication; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism; Folate biosynthesis; Histidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF02518; PF14501; PF00512; PF00989; PF08447; PF13188; PF13426;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GHKL domain; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS domain; PAS domain;
pfam_id HATPase_c; HATPase_c_5; HisKA; PAS; PAS_3; PAS_8; PAS_9;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:7e-24 score:83.7 best_domain_score:82.1 name:HATPase_c; db:Pfam-A.hmm|PF14501.6 evalue:6.4e-05 score:22.0 best_domain_score:15.4 name:HATPase_c_5; db:Pfam-A.hmm|PF00512.25 evalue:6.8e-11 score:41.3 best_domain_score:40.3 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:7.6e-15 score:54.1 best_domain_score:23.9 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:1.9e-11 score:43.4 best_domain_score:22.7 name:PAS_3; db:Pfam-A.hmm|PF13188.7 evalue:2.9e-17 score:61.5 best_domain_score:19.4 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:1.7e-16 score:59.6 best_domain_score:26.2 name:PAS_9;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:2e-28 score:98.2 best_domain_score:47.5 name:TIGR00229;
11943 12776 CDS
ID metaerg.pl|11836
allgo_ids GO:0003700; GO:0006355; GO:0043565;
allko_ids K10916; K08479; K03388; K02668; K01768; K07710; K07716; K02489; K07636; K07653; K02480; K00567; K02482; K10715; K07678; K11527; K06379; K07676; K10681; K07644; K07709; K13530; K10125; K11357; K04757; K07769; K12767; K02486; K13761; K11383; K07675; K13529; K10778; K07647; K07637; K03407; K07682; K07654; K07652; K07639; K08475; K07673; K01120; K07641; K07646; K01649; K07711; K07768; K07778; K11354; K07651; K07648; K07679; K02478; K07642; K11711; K11640; K11356; K02484; K00760; K01937; K08282; K07704; K10909; K07645; K07677; K07708; K02491; K11231;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091331.1 1 277 evalue:1.1e-145 qcov:100.00 identity:92.10;
kegg_pathway_id 00290; 00983; 05111; 00230; 00240; 02020; 04011; 00620; 03090; 00790;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Drug metabolism - other enzymes; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF12833; PF00165; PF00072;
pfam_desc Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family; Response regulator receiver domain;
pfam_id HTH_18; HTH_AraC; Response_reg;
pfam_target db:Pfam-A.hmm|PF12833.7 evalue:6.4e-21 score:73.6 best_domain_score:73.0 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:2.1e-18 score:65.2 best_domain_score:31.7 name:HTH_AraC; db:Pfam-A.hmm|PF00072.24 evalue:4.5e-25 score:87.2 best_domain_score:86.2 name:Response_reg;
13320 13108 CDS
ID metaerg.pl|11837
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
tm_num 1;
13320 13108 transmembrane_helix
ID metaerg.pl|11838
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology o13186-13245i;
13386 14468 CDS
ID metaerg.pl|11839
allgo_ids GO:0043190; GO:0042597; GO:0042301; GO:0035435;
allko_ids K02040;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091332.1 1 358 evalue:3.8e-181 qcov:99.40 identity:86.30;
kegg_pathway_id 02010; 02020;
kegg_pathway_name ABC transporters - General; Two-component system - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF12727; PF12849; PF01547;
pfam_desc PBP superfamily domain; PBP superfamily domain; Bacterial extracellular solute-binding protein;
pfam_id PBP_like; PBP_like_2; SBP_bac_1;
pfam_target db:Pfam-A.hmm|PF12727.7 evalue:1.6e-09 score:36.4 best_domain_score:33.7 name:PBP_like; db:Pfam-A.hmm|PF12849.7 evalue:3.3e-56 score:190.3 best_domain_score:190.0 name:PBP_like_2; db:Pfam-A.hmm|PF01547.25 evalue:4.2e-12 score:45.9 best_domain_score:44.4 name:SBP_bac_1;
sp YES;
sprot_desc Phosphate-binding protein PstS;
sprot_id sp|Q98FL2|PSTS_RHILO;
sprot_target db:uniprot_sprot|sp|Q98FL2|PSTS_RHILO 41 352 evalue:2.2e-58 qcov:86.70 identity:40.50;
tigrfam_acc TIGR00975;
tigrfam_desc phosphate ABC transporter, phosphate-binding protein PstS;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3a0107s03;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00975 evalue:9.7e-96 score:319.7 best_domain_score:319.4 name:TIGR00975;
tm_num 1;
13386 13451 lipoprotein_signal_peptide
ID metaerg.pl|11840
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
13386 14468 transmembrane_helix
ID metaerg.pl|11841
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i13404-13472o;
14577 15542 CDS
ID metaerg.pl|11842
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0005315; GO:0006817;
allko_ids K02038; K02037;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091333.1 1 321 evalue:1.1e-155 qcov:100.00 identity:91.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.2e-18 score:66.8 best_domain_score:66.8 name:BPD_transp_1;
sprot_desc Phosphate transport system permease protein PstC;
sprot_id sp|Q87C90|PSTC_XYLFT;
sprot_target db:uniprot_sprot|sp|Q87C90|PSTC_XYLFT 34 321 evalue:1.9e-53 qcov:89.70 identity:42.70;
tigrfam_acc TIGR02138;
tigrfam_desc phosphate ABC transporter, permease protein PstC;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name phosphate_pstC;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02138 evalue:3e-87 score:291.6 best_domain_score:291.4 name:TIGR02138;
tm_num 7;
14577 15542 transmembrane_helix
ID metaerg.pl|11843
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology o14655-14723i14760-14828o14838-14906i14943-15011o15108-15176i15237-15305o15438-15506i;
15605 16510 CDS
ID metaerg.pl|11844
allgo_ids GO:0016020; GO:0055085; GO:0005887; GO:0005315; GO:0006974; GO:0035435; GO:0006817; GO:0010921;
allko_ids K02037; K02038;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091334.1 1 301 evalue:1.2e-143 qcov:100.00 identity:90.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.5e-19 score:69.7 best_domain_score:69.7 name:BPD_transp_1;
sprot_desc Phosphate transport system permease protein PstA;
sprot_id sp|P07654|PSTA_ECOLI;
sprot_target db:uniprot_sprot|sp|P07654|PSTA_ECOLI 20 300 evalue:4.8e-51 qcov:93.40 identity:40.20;
tigrfam_acc TIGR00974;
tigrfam_desc phosphate ABC transporter, permease protein PstA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3a0107s02c;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00974 evalue:9e-82 score:273.4 best_domain_score:273.2 name:TIGR00974;
tm_num 7;
15605 16510 transmembrane_helix
ID metaerg.pl|11845
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i15704-15772o15887-15955i15989-16057o16070-16129i16223-16291o16334-16402i16421-16489o;
16581 17390 CDS
ID metaerg.pl|11846
allec_ids 7.3.2.1; 3.6.3.27;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015415; GO:0005315;
allko_ids K02023; K02036; K02000; K10112; K10111; K01995; K02049; K05816; K10235; K06021; K01996; K06861; K02071; K02045; K11072; K02052; K02006; K05847; K02010; K02017; K11084;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091335.1 1 269 evalue:1.6e-144 qcov:100.00 identity:94.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.7e-10 score:39.3 best_domain_score:20.5 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:3.3e-29 score:101.4 best_domain_score:100.8 name:ABC_tran;
sprot_desc Phosphate import ATP-binding protein PstB 2;
sprot_id sp|Q2JKC2|PSTB2_SYNJB;
sprot_target db:uniprot_sprot|sp|Q2JKC2|PSTB2_SYNJB 11 269 evalue:1.0e-105 qcov:96.30 identity:71.00;
tigrfam_acc TIGR00972;
tigrfam_desc phosphate ABC transporter, ATP-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3a0107s01c2;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00972 evalue:2.3e-115 score:383.3 best_domain_score:383.1 name:TIGR00972;
17666 18469 CDS
ID metaerg.pl|11847
allec_ids 7.3.2.1; 3.6.3.27;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015415; GO:0005315;
allko_ids K02000; K02036; K02023; K05816; K02049; K01995; K10111; K10112; K02045; K11072; K06861; K02071; K01996; K06021; K02017; K02010; K05847; K02052; K02006;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091336.1 1 267 evalue:5.0e-146 qcov:100.00 identity:96.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:4.3e-09 score:35.8 best_domain_score:19.3 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:6.1e-29 score:100.5 best_domain_score:99.9 name:ABC_tran;
sprot_desc Phosphate import ATP-binding protein PstB 3;
sprot_id sp|Q8YNJ3|PSTB3_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YNJ3|PSTB3_NOSS1 1 267 evalue:1.2e-135 qcov:100.00 identity:87.70;
tigrfam_acc TIGR00972;
tigrfam_desc phosphate ABC transporter, ATP-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3a0107s01c2;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00972 evalue:8.1e-117 score:388.1 best_domain_score:387.9 name:TIGR00972;
20037 18580 CDS
ID metaerg.pl|11848
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091286.1 1 485 evalue:4.5e-262 qcov:100.00 identity:92.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF11329;
pfam_desc Protein of unknown function (DUF3131);
pfam_id DUF3131;
pfam_target db:Pfam-A.hmm|PF11329.8 evalue:1.4e-146 score:487.5 best_domain_score:487.2 name:DUF3131;
sp YES;
tm_num 1;
18580 18684 signal_peptide
ID metaerg.pl|11849
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
20037 18580 transmembrane_helix
ID metaerg.pl|11850
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i18613-18681o;
20632 21000 CDS
ID metaerg.pl|11851
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc flagelliforme;
genomedb_acc GCF_002813575.1;
genomedb_target db:genomedb|GCF_002813575.1|WP_100903920.1 1 122 evalue:5.1e-29 qcov:100.00 identity:57.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF11329;
pfam_desc Protein of unknown function (DUF3131);
pfam_id DUF3131;
pfam_target db:Pfam-A.hmm|PF11329.8 evalue:4.7e-11 score:41.6 best_domain_score:41.3 name:DUF3131;
21168 23168 CDS
ID metaerg.pl|11852
allgo_ids GO:0016020; GO:0016760; GO:0030244;
allko_ids K00694;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091285.1 1 666 evalue:0.0e+00 qcov:100.00 identity:91.40;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF03552; PF00535; PF13641; PF13506; PF13632;
pfam_desc Cellulose synthase; Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family 21; Glycosyl transferase family group 2;
pfam_id Cellulose_synt; Glycos_transf_2; Glyco_tranf_2_3; Glyco_transf_21; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF03552.14 evalue:4.5e-39 score:133.8 best_domain_score:70.4 name:Cellulose_synt; db:Pfam-A.hmm|PF00535.26 evalue:6.9e-18 score:64.3 best_domain_score:42.5 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:5.5e-20 score:71.5 best_domain_score:58.9 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13506.6 evalue:7.2e-09 score:34.6 best_domain_score:16.0 name:Glyco_transf_21; db:Pfam-A.hmm|PF13632.6 evalue:4.5e-19 score:68.4 best_domain_score:68.4 name:Glyco_trans_2_3;
tm_num 7;
21168 23168 transmembrane_helix
ID metaerg.pl|11853
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i21243-21311o21354-21422i22668-22736o22764-22832i22869-22928o22971-23039i23076-23144o;
23359 23685 CDS
ID metaerg.pl|11854
allgo_ids GO:0045152; GO:0006355; GO:0030435;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091284.1 1 106 evalue:4.2e-43 qcov:98.10 identity:88.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF01740; PF13466;
pfam_desc STAS domain; STAS domain;
pfam_id STAS; STAS_2;
pfam_target db:Pfam-A.hmm|PF01740.21 evalue:2.8e-17 score:61.7 best_domain_score:61.5 name:STAS; db:Pfam-A.hmm|PF13466.6 evalue:7.5e-09 score:35.1 best_domain_score:34.9 name:STAS_2;
sprot_desc Anti-sigma F factor antagonist;
sprot_id sp|P70877|SP2AA_BACCO;
sprot_target db:uniprot_sprot|sp|P70877|SP2AA_BACCO 12 96 evalue:4.4e-07 qcov:78.70 identity:32.60;
tigrfam_acc TIGR00377;
tigrfam_desc anti-anti-sigma factor;
tigrfam_mainrole Regulatory functions;
tigrfam_name ant_ant_sig;
tigrfam_sub1role Protein interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00377 evalue:8.1e-22 score:76.3 best_domain_score:76.0 name:TIGR00377;
24977 23817 CDS
ID metaerg.pl|11855
allgo_ids GO:0000160;
allko_ids K08479; K03388; K02668; K01768; K07710; K07716; K02489; K07636; K07653; K02480; K02482; K07678; K10715; K11527; K07676; K10681; K06379; K07650; K07644; K11357; K10125; K04757; K02486; K11383; K12767; K07675; K07647; K07637; K03407; K07682; K07654; K07652; K07673; K01120; K07639; K07646; K07641; K07711; K11354; K07778; K07651; K07648; K02478; K07679; K07642; K11711; K11640; K11356; K02484; K08282; K01937; K07704; K07708; K07677; K02491; K11231;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091283.1 1 386 evalue:3.0e-200 qcov:100.00 identity:90.70;
kegg_pathway_id 00240; 00230; 00790; 03090; 02020; 04011;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Folate biosynthesis; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF00072; PF07228;
pfam_desc Response regulator receiver domain; Stage II sporulation protein E (SpoIIE);
pfam_id Response_reg; SpoIIE;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:1.2e-22 score:79.4 best_domain_score:78.7 name:Response_reg; db:Pfam-A.hmm|PF07228.12 evalue:2.3e-38 score:131.3 best_domain_score:130.5 name:SpoIIE;
25159 25575 CDS
ID metaerg.pl|11856
allko_ids K04757; K06379; K08282;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091282.1 1 138 evalue:1.7e-65 qcov:100.00 identity:87.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF13581;
pfam_desc Histidine kinase-like ATPase domain;
pfam_id HATPase_c_2;
pfam_target db:Pfam-A.hmm|PF13581.6 evalue:3.6e-17 score:61.7 best_domain_score:61.6 name:HATPase_c_2;
29954 25908 CDS
ID metaerg.pl|11857
allgo_ids GO:0005515;
allko_ids K11711; K07642; K02484; K00760; K11356; K04486; K11640; K07708; K07645; K07677; K07704; K10909; K01937; K08282; K11231; K07643; K02491; K13490; K01090; K07654; K00936; K07682; K07649; K07777; K03407; K07637; K13598; K07641; K07646; K07639; K08475; K01120; K07673; K07652; K07778; K07683; K11354; K11633; K02575; K07768; K07711; K00873; K08884; K13533; K11328; K07679; K02478; K07648; K07651; K11623; K07718; K07698; K01769; K07650; K06379; K07676; K10681; K07709; K13532; K07644; K12767; K02486; K13761; K11383; K11520; K07769; K14509; K11617; K04757; K02342; K10125; K11629; K11357; K07680; K07647; K13040; K10942; K07675; K07717; K02668; K03388; K08479; K07674; K10916; K07697; K02489; K07716; K07710; K07640; K07656; K01768; K08801; K02482; K14489; K02480; K07653; K07638; K07636; K02030; K11527; K13587; K02026; K10715; K07678;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091281.1 1 1346 evalue:0.0e+00 qcov:99.90 identity:85.60;
kegg_pathway_id 00620; 03090; 02020; 04011; 00340; 00790; 00983; 00710; 00010; 03030; 00240; 05111; 00230;
kegg_pathway_name Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Histidine metabolism; Folate biosynthesis; Drug metabolism - other enzymes; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; DNA replication; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF05227; PF01590; PF13185; PF13492; PF02518; PF00512; PF01627; PF00989; PF08447; PF08448; PF13188; PF13426; PF00072;
pfam_desc CHASE3 domain; GAF domain; GAF domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Hpt domain; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id CHASE3; GAF; GAF_2; GAF_3; HATPase_c; HisKA; Hpt; PAS; PAS_3; PAS_4; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF05227.13 evalue:1.6e-38 score:131.0 best_domain_score:131.0 name:CHASE3; db:Pfam-A.hmm|PF01590.26 evalue:2.1e-34 score:118.2 best_domain_score:70.0 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:2.4e-13 score:49.8 best_domain_score:22.8 name:GAF_2; db:Pfam-A.hmm|PF13492.6 evalue:1e-10 score:41.3 best_domain_score:22.9 name:GAF_3; db:Pfam-A.hmm|PF02518.26 evalue:2.1e-31 score:107.9 best_domain_score:106.7 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:3.6e-16 score:58.2 best_domain_score:58.2 name:HisKA; db:Pfam-A.hmm|PF01627.23 evalue:3.4e-12 score:45.7 best_domain_score:45.7 name:Hpt; db:Pfam-A.hmm|PF00989.25 evalue:1.2e-08 score:34.2 best_domain_score:33.0 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:1.9e-07 score:30.5 best_domain_score:29.0 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:8.9e-12 score:44.5 best_domain_score:42.8 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:2.7e-05 score:23.3 best_domain_score:21.6 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:4.5e-13 score:48.6 best_domain_score:46.0 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:1.2e-48 score:163.1 best_domain_score:89.3 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.2e-22 score:79.5 best_domain_score:79.3 name:TIGR00229;
tm_num 2;
29954 25908 transmembrane_helix
ID metaerg.pl|11858
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology o26466-26525i26988-27056o;
30342 30013 CDS
ID metaerg.pl|11859
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
sp YES;
30013 30078 signal_peptide
ID metaerg.pl|11860
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
30467 31564 CDS
ID metaerg.pl|11861
allec_ids 3.4.24.-;
allgo_ids GO:0005515; GO:0016021; GO:0005886; GO:0046872; GO:0004222;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195503.1 1 365 evalue:1.1e-193 qcov:100.00 identity:98.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF13180; PF17820; PF02163;
pfam_desc PDZ domain; PDZ domain; Peptidase family M50;
pfam_id PDZ_2; PDZ_6; Peptidase_M50;
pfam_target db:Pfam-A.hmm|PF13180.6 evalue:5.2e-09 score:35.5 best_domain_score:34.7 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:1.3e-08 score:33.8 best_domain_score:32.3 name:PDZ_6; db:Pfam-A.hmm|PF02163.22 evalue:2.3e-67 score:226.1 best_domain_score:225.9 name:Peptidase_M50;
sp YES;
sprot_desc Putative zinc metalloprotease all3971;
sprot_id sp|Q8YQ64|Y3971_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YQ64|Y3971_NOSS1 1 365 evalue:6.6e-172 qcov:100.00 identity:84.10;
tigrfam_acc TIGR00054;
tigrfam_desc RIP metalloprotease RseP;
tigrfam_mainrole Protein fate;
tigrfam_name TIGR00054;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00054 evalue:3.5e-104 score:348.1 best_domain_score:190.5 name:TIGR00054;
tm_num 4;
30467 30541 signal_peptide
ID metaerg.pl|11862
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
30467 31564 transmembrane_helix
ID metaerg.pl|11863
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i30473-30541o30740-30799i31310-31378o31454-31507i;
31561 32229 CDS
ID metaerg.pl|11864
allec_ids 4.2.99.18;
allgo_ids GO:0003677; GO:0051539; GO:0140078; GO:0019104; GO:0046872; GO:0006285;
allko_ids K03575; K01247; K01249; K03653; K10773; K03660; K10801; K01741; K13529;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091198.1 1 219 evalue:2.9e-115 qcov:98.60 identity:95.90;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF00633; PF00730;
pfam_desc Helix-hairpin-helix motif; HhH-GPD superfamily base excision DNA repair protein;
pfam_id HHH; HhH-GPD;
pfam_target db:Pfam-A.hmm|PF00633.23 evalue:3.7e-06 score:25.8 best_domain_score:20.9 name:HHH; db:Pfam-A.hmm|PF00730.25 evalue:2.1e-27 score:94.9 best_domain_score:94.4 name:HhH-GPD;
sprot_desc Endonuclease III;
sprot_id sp|P73715|END3_SYNY3;
sprot_target db:uniprot_sprot|sp|P73715|END3_SYNY3 2 216 evalue:4.0e-87 qcov:96.80 identity:73.50;
tigrfam_acc TIGR01083;
tigrfam_desc endonuclease III;
tigrfam_mainrole DNA metabolism;
tigrfam_name nth;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR01083 evalue:8.4e-78 score:259.6 best_domain_score:259.4 name:TIGR01083;
32307 32609 CDS
ID metaerg.pl|11865
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02954;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_006195501.1 1 100 evalue:3.4e-47 qcov:100.00 identity:96.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF00253;
pfam_desc Ribosomal protein S14p/S29e;
pfam_id Ribosomal_S14;
pfam_target db:Pfam-A.hmm|PF00253.21 evalue:1.2e-26 score:91.5 best_domain_score:91.0 name:Ribosomal_S14;
sprot_desc 30S ribosomal protein S14;
sprot_id sp|B2J6L1|RS14_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J6L1|RS14_NOSP7 1 100 evalue:7.6e-46 qcov:100.00 identity:87.00;
32985 32656 CDS
ID metaerg.pl|11866
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091199.1 1 109 evalue:1.5e-53 qcov:100.00 identity:97.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
33073 33648 CDS
ID metaerg.pl|11867
allec_ids 2.3.2.6;
allgo_ids GO:0008914; GO:0030163; GO:0005737;
allko_ids K00684;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091200.1 1 191 evalue:3.7e-103 qcov:100.00 identity:96.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF03588;
pfam_desc Leucyl/phenylalanyl-tRNA protein transferase;
pfam_id Leu_Phe_trans;
pfam_target db:Pfam-A.hmm|PF03588.14 evalue:3.7e-58 score:195.0 best_domain_score:194.8 name:Leu_Phe_trans;
sprot_desc Leucyl/phenylalanyl-tRNA--protein transferase;
sprot_id sp|B2J6L3|LFTR_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J6L3|LFTR_NOSP7 1 191 evalue:1.8e-91 qcov:100.00 identity:83.20;
tigrfam_acc TIGR00667;
tigrfam_desc leucyl/phenylalanyl-tRNA--protein transferase;
tigrfam_mainrole Protein fate;
tigrfam_name aat;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00667 evalue:4.3e-72 score:240.8 best_domain_score:240.5 name:TIGR00667;
33754 34755 CDS
ID metaerg.pl|11868
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena;s__Pseudanabaena sp002914585;
genomedb_acc GCF_002914585.1;
genomedb_target db:genomedb|GCF_002914585.1|WP_103668052.1 4 328 evalue:1.1e-126 qcov:97.60 identity:69.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
34768 35121 CDS
ID metaerg.pl|11869
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
35236 35499 CDS
ID metaerg.pl|11870
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091202.1 1 87 evalue:5.0e-39 qcov:100.00 identity:98.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
35483 35809 CDS
ID metaerg.pl|11871
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195491.1 1 108 evalue:4.5e-53 qcov:100.00 identity:96.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF05016;
pfam_desc #=GF GA 21.90; 21.90;;
pfam_id ParE_toxin;
pfam_target db:Pfam-A.hmm|PF05016.15 evalue:1.5e-11 score:44.0 best_domain_score:43.8 name:ParE_toxin;
36620 35811 CDS
ID metaerg.pl|11872
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091204.1 1 269 evalue:3.7e-141 qcov:100.00 identity:94.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF12204;
pfam_desc Domain of unknown function (DUF3598);
pfam_id DUF3598;
pfam_target db:Pfam-A.hmm|PF12204.8 evalue:7.9e-114 score:378.9 best_domain_score:378.7 name:DUF3598;
37548 36646 CDS
ID metaerg.pl|11873
allko_ids K09811;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091205.1 1 300 evalue:1.9e-154 qcov:100.00 identity:98.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF18075;
pfam_desc FtsX extracellular domain;
pfam_id FtsX_ECD;
pfam_target db:Pfam-A.hmm|PF18075.1 evalue:8.4e-14 score:51.2 best_domain_score:50.5 name:FtsX_ECD;
tm_num 4;
37548 36646 transmembrane_helix
ID metaerg.pl|11874
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i36703-36771o37165-37233i37294-37362o37459-37527i;
37699 38262 CDS
ID metaerg.pl|11875
allec_ids 3.5.1.88;
allgo_ids GO:0046872; GO:0042586; GO:0006412;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091206.1 1 187 evalue:5.8e-101 qcov:100.00 identity:98.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF01327;
pfam_desc Polypeptide deformylase;
pfam_id Pep_deformylase;
pfam_target db:Pfam-A.hmm|PF01327.21 evalue:8.7e-51 score:170.9 best_domain_score:170.5 name:Pep_deformylase;
sprot_desc Peptide deformylase;
sprot_id sp|P94601|DEF_MICDP;
sprot_target db:uniprot_sprot|sp|P94601|DEF_MICDP 1 187 evalue:2.2e-94 qcov:100.00 identity:90.90;
tigrfam_acc TIGR00079;
tigrfam_desc peptide deformylase;
tigrfam_mainrole Protein fate;
tigrfam_name pept_deformyl;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00079 evalue:3.8e-57 score:191.5 best_domain_score:191.2 name:TIGR00079;
38273 38476 CDS
ID metaerg.pl|11876
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091207.1 1 67 evalue:1.3e-26 qcov:100.00 identity:94.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
tm_num 2;
38273 38476 transmembrane_helix
ID metaerg.pl|11877
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i38291-38350o38378-38446i;
38713 39510 CDS
ID metaerg.pl|11878
casgene_acc cd09637_cas4_CAS-I:CAS-II:CAS-V;
casgene_name cas4;
casgene_target db:casgenes.hmm|cd09637_cas4_CAS-I:CAS-II:CAS-V evalue:2.6e-07 score:30.2 best_domain_score:29.4 name:cas4;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091208.1 1 265 evalue:9.0e-132 qcov:100.00 identity:87.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF12705;
pfam_desc PD-(D/E)XK nuclease superfamily;
pfam_id PDDEXK_1;
pfam_target db:Pfam-A.hmm|PF12705.7 evalue:1.2e-31 score:109.8 best_domain_score:106.0 name:PDDEXK_1;
39527 40156 CDS
ID metaerg.pl|11879
allgo_ids GO:0016747;
allko_ids K03830; K06957;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091209.1 1 209 evalue:5.0e-117 qcov:100.00 identity:98.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF00583; PF13673; PF13508; PF13527; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7; Acetyltransf_9; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:3.9e-18 score:65.0 best_domain_score:64.4 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:1.3e-09 score:37.3 best_domain_score:36.7 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:4.5e-11 score:42.3 best_domain_score:41.2 name:Acetyltransf_7; db:Pfam-A.hmm|PF13527.7 evalue:5.9e-08 score:32.1 best_domain_score:31.1 name:Acetyltransf_9; db:Pfam-A.hmm|PF08445.10 evalue:9.4e-09 score:34.4 best_domain_score:33.7 name:FR47;
40408 42729 CDS
ID metaerg.pl|11880
allec_ids 3.1.-.-;
allgo_ids GO:0003676; GO:0008409; GO:0003677; GO:0006310; GO:0006281;
allko_ids K07462;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091210.1 1 770 evalue:0.0e+00 qcov:99.60 identity:90.10;
kegg_pathway_id 03410; 03430; 03440;
kegg_pathway_name Base excision repair; Mismatch repair; Homologous recombination;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01368; PF02272; PF17768;
pfam_desc DHH family; DHHA1 domain; RecJ OB domain;
pfam_id DHH; DHHA1; RecJ_OB;
pfam_target db:Pfam-A.hmm|PF01368.20 evalue:1.7e-09 score:37.1 best_domain_score:36.2 name:DHH; db:Pfam-A.hmm|PF02272.19 evalue:1.3e-12 score:47.5 best_domain_score:46.6 name:DHHA1; db:Pfam-A.hmm|PF17768.1 evalue:1.2e-12 score:47.3 best_domain_score:46.3 name:RecJ_OB;
sprot_desc Single-stranded-DNA-specific exonuclease RecJ;
sprot_id sp|O32044|RECJ_BACSU;
sprot_target db:uniprot_sprot|sp|O32044|RECJ_BACSU 1 589 evalue:9.0e-70 qcov:76.20 identity:31.70;
tigrfam_acc TIGR00644;
tigrfam_desc single-stranded-DNA-specific exonuclease RecJ;
tigrfam_mainrole DNA metabolism;
tigrfam_name recJ;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00644 evalue:4.3e-141 score:470.0 best_domain_score:469.6 name:TIGR00644;
43400 42792 CDS
ID metaerg.pl|11881
allgo_ids GO:0003677; GO:0004803; GO:0006313;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc calcicola;
genomedb_acc GCF_001904715.1;
genomedb_target db:genomedb|GCF_001904715.1|WP_073643353.1 1 202 evalue:2.0e-91 qcov:100.00 identity:77.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF01797;
pfam_desc Transposase IS200 like;
pfam_id Y1_Tnp;
pfam_target db:Pfam-A.hmm|PF01797.16 evalue:2.3e-09 score:36.7 best_domain_score:23.5 name:Y1_Tnp;
44372 43662 CDS
ID metaerg.pl|11882
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091211.1 1 230 evalue:3.4e-114 qcov:97.50 identity:85.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF02698;
pfam_desc DUF218 domain;
pfam_id DUF218;
pfam_target db:Pfam-A.hmm|PF02698.17 evalue:1e-08 score:34.5 best_domain_score:34.1 name:DUF218;
tm_num 1;
44372 43662 transmembrane_helix
ID metaerg.pl|11883
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i43740-43808o;
44707 46044 CDS
ID metaerg.pl|11884
allec_ids 3.4.21.102; 3.4.21.-;
allgo_ids GO:0005515; GO:0031977; GO:0008236;
allko_ids K03797;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091212.1 1 445 evalue:2.7e-237 qcov:100.00 identity:95.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF00595; PF13180; PF17820; PF03572; PF14685;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Peptidase family S41; Tricorn protease PDZ domain;
pfam_id PDZ; PDZ_2; PDZ_6; Peptidase_S41; Tricorn_PDZ;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:6.1e-11 score:41.8 best_domain_score:40.8 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:1.2e-13 score:50.5 best_domain_score:49.3 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:5.1e-13 score:47.9 best_domain_score:46.7 name:PDZ_6; db:Pfam-A.hmm|PF03572.18 evalue:5.9e-55 score:184.6 best_domain_score:183.9 name:Peptidase_S41; db:Pfam-A.hmm|PF14685.6 evalue:5.6e-06 score:25.5 best_domain_score:24.1 name:Tricorn_PDZ;
sp YES;
sprot_desc Carboxyl-terminal-processing protease;
sprot_id sp|P42784|CTPA_SYNP2;
sprot_target db:uniprot_sprot|sp|P42784|CTPA_SYNP2 40 420 evalue:4.2e-80 qcov:85.60 identity:43.70;
tigrfam_acc TIGR00225;
tigrfam_desc C-terminal processing peptidase;
tigrfam_mainrole Protein fate;
tigrfam_name prc;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00225 evalue:4.3e-114 score:380.2 best_domain_score:379.9 name:TIGR00225;
tm_num 1;
44707 44823 signal_peptide
ID metaerg.pl|11885
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
44707 46044 transmembrane_helix
ID metaerg.pl|11886
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i44743-44811o;
46164 47126 CDS
ID metaerg.pl|11887
allec_ids 2.4.1.-;
allgo_ids GO:0016757; GO:0016021; GO:0005886; GO:0045232;
allko_ids K00698; K12997; K00729; K12992; K00694; K00710; K00721;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091213.1 1 320 evalue:1.8e-163 qcov:100.00 identity:88.80;
kegg_pathway_id 00510; 01030; 00530; 00500;
kegg_pathway_name N-Glycan biosynthesis; Glycan structures - biosynthesis 1; Aminosugars metabolism; Starch and sucrose metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
metacyc_pathway_id PWY-881; PWY-5268; PWY-5397; PWY-6404; PWY-5380; PWY-2901; PWY-5793; PWY-5313; ECASYN-PWY; PWY-5272; PWY-5284; PWY-5784; PWY-83; PWY-5379; PWY-5343; PWY-2881; PWY-5307; PWY-5342; PWY-5405; PWY-5399; PWY-5400; PWY-6297; PWY-5338; PWY-2021; PWY-5797; PWY-5672; PWY-5286; PWY-5759; PWY-5774; PWY-5339; PWY-5926; PWY-5398; PWY-5139; PWY-5160; PWY-5756; PWY-5666; PWY-6397; PWY-4421; PWY-5161; PWY-5800;
metacyc_pathway_name trehalose biosynthesis II;; salvianin biosynthesis;; crocetin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; A series fagopyritols biosynthesis;; cytokinins 9-N-glucoside biosynthesis;; maysin biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; enterobacterial common antigen biosynthesis;; abscisic acid degradation by glucosylation;; shisonin biosynthesis;; indole-3-acetate inactivation VIII;; monolignol glucosides biosynthesis;; B series fagopyritols biosynthesis;; ajugose biosynthesis II (galactinol-independent);; cytokinins 7-N-glucoside biosynthesis;; gentiodelphin biosynthesis;; ajugose biosynthesis I (galactinol-dependent);; superpathway of betalain biosynthesis;; betacyanin biosynthesis;; amaranthin biosynthesis;; tuberonate glucoside biosynthesis;; galactosylcyclitol biosynthesis;; indole-3-acetate inactivation IV;; indole-3-acetate inactivation VI;; ginsenosides biosynthesis;; anthocyanidin sophoroside metabolism;; saponin biosynthesis III;; saponin biosynthesis IV;; chalcone 2'-O-glucoside biosynthesis;; afrormosin conjugates interconversion;; crocetin esters biosynthesis;; pelargonidin conjugates biosynthesis;; rose anthocyanin biosynthesis I (via cyanidin 5-O-β-D-glucoside);; saponin biosynthesis II;; α-solanine/α-chaconine biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; curcumin glucoside biosynthesis;; 6'-deoxychalcone metabolism;; xylan biosynthesis;;
metacyc_pathway_type Trehalose-biosynthesis;; ANTHOCYANIN-SYN;; APOCAROTENOID-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; CYCLITOLS-DEG; SUGAR-DERIVS;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; FLAVONE-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Abscisic-Acid-Degradation; Interconversion;; ANTHOCYANIN-SYN;; Indole-3-Acetate-Inactivation;; LIGNIN-SYN; Metabolic-Clusters;; CYCLITOLS-DEG; SUGAR-DERIVS;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; ANTHOCYANIN-SYN;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; BETALAIN-ALKALOIDS;; BETALAIN-ALKALOIDS;; Inactivation;; Cyclitols-Biosynthesis;; Indole-3-Acetate-Inactivation;; Indole-3-Acetate-Inactivation;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN; Metabolic-Clusters;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; CHALCONE-SYN;; ISOFLAVONOID-SYN; Interconversion;; APOCAROTENOID-SYN;; ANTHOCYANIN-SYN;; ANTHOCYANIN-SYN;; TRITERPENOID-SYN;; ALKALOIDS-SYN;; Cell-Wall-Biosynthesis;; PHENYLPROPANOID-SYN; POLYKETIDE-SYN;; CHALCONE-SYN;; SECONDARY-CELL-WALL;;
pfam_acc PF00535; PF10111; PF13641; PF13506; PF13632;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyltransferase like family 2; Glycosyl transferase family 21; Glycosyl transferase family group 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_2; Glyco_tranf_2_3; Glyco_transf_21; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:9.7e-30 score:102.8 best_domain_score:101.9 name:Glycos_transf_2; db:Pfam-A.hmm|PF10111.9 evalue:7.5e-11 score:41.2 best_domain_score:36.2 name:Glyco_tranf_2_2; db:Pfam-A.hmm|PF13641.6 evalue:2.4e-24 score:85.8 best_domain_score:85.2 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13506.6 evalue:1.3e-06 score:27.2 best_domain_score:26.5 name:Glyco_transf_21; db:Pfam-A.hmm|PF13632.6 evalue:4.8e-09 score:35.6 best_domain_score:35.3 name:Glyco_trans_2_3;
sprot_desc Glycosyltransferase AglI;
sprot_id sp|D4GYH2|AGLI_HALVD;
sprot_target db:uniprot_sprot|sp|D4GYH2|AGLI_HALVD 11 237 evalue:2.5e-26 qcov:70.90 identity:33.00;
47194 47889 CDS
ID metaerg.pl|11888
allgo_ids GO:0006355; GO:0009507; GO:0003677; GO:0000160;
allko_ids K11527; K07678; K10715; K02482; K02480; K07653; K07636; K02489; K07716; K07710; K01768; K02668; K03388; K08479; K10916; K07647; K07717; K07675; K13761; K02486; K11383; K12767; K07769; K04757; K11357; K10125; K07709; K07644; K01769; K07650; K07676; K10681; K06379; K02478; K07679; K07648; K07651; K07718; K11354; K07778; K07768; K07711; K00873; K07646; K07641; K01120; K07673; K08475; K07639; K07652; K07654; K07682; K03407; K07637; K11231; K13490; K02491; K07677; K07645; K07708; K10909; K07704; K08282; K01937; K02484; K00760; K11356; K11640; K11711; K07642;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091214.1 1 231 evalue:3.4e-119 qcov:100.00 identity:97.00;
kegg_pathway_id 00790; 02020; 04011; 00620; 03090; 05111; 00230; 00240; 00010; 00710; 00983;
kegg_pathway_name Folate biosynthesis; Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Drug metabolism - other enzymes;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF00196; PF00072; PF08281;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain; Sigma-70, region 4;
pfam_id GerE; Response_reg; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:6.2e-17 score:60.1 best_domain_score:59.2 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:2.8e-31 score:107.2 best_domain_score:106.4 name:Response_reg; db:Pfam-A.hmm|PF08281.12 evalue:3.6e-07 score:29.0 best_domain_score:28.0 name:Sigma70_r4_2;
sprot_desc Probable transcriptional regulator ycf29;
sprot_id sp|Q1XDE4|YCF29_PYRYE;
sprot_target db:uniprot_sprot|sp|Q1XDE4|YCF29_PYRYE 1 229 evalue:1.2e-46 qcov:99.10 identity:44.50;
48944 48663 CDS
ID metaerg.pl|11889
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__NIES-4103;s__NIES-4103 sp002368335;
genomedb_acc GCF_002368335.1;
genomedb_target db:genomedb|GCF_002368335.1|WP_096558018.1 1 93 evalue:2.2e-40 qcov:100.00 identity:97.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF18068;
pfam_desc Npun R1517;
pfam_id Npun_R1517;
pfam_target db:Pfam-A.hmm|PF18068.1 evalue:1.1e-43 score:146.7 best_domain_score:146.4 name:Npun_R1517;
49599 49955 CDS
ID metaerg.pl|11890
allec_ids 7.1.1.-;
allgo_ids GO:0016655; GO:0055114; GO:0042651; GO:0048038;
allko_ids K05584;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091216.1 1 118 evalue:3.8e-58 qcov:100.00 identity:97.50;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF10664;
pfam_desc Cyanobacterial and plastid NDH-1 subunit M;
pfam_id NdhM;
pfam_target db:Pfam-A.hmm|PF10664.9 evalue:1.4e-53 score:178.9 best_domain_score:178.7 name:NdhM;
sprot_desc NAD(P)H-quinone oxidoreductase subunit M;
sprot_id sp|Q3MGF7|NDHM_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MGF7|NDHM_ANAVT 1 117 evalue:3.3e-56 qcov:99.20 identity:90.60;
50877 50545 CDS
ID metaerg.pl|11891
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198624.1 1 102 evalue:1.6e-45 qcov:92.70 identity:83.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
52463 50919 CDS
ID metaerg.pl|11892
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K03407; K13302; K00924; K07682; K02831; K07673; K11265; K08884; K05113; K08810; K07683; K07778; K11623; K04442; K05111; K08846; K05105; K04444; K08848; K08897; K11228; K08790; K08854; K11912; K08282; K08856; K05102; K08333; K05103; K08855; K05098; K05112; K08809; K04373; K08792; K08286; K01768; K04445; K05091; K02480; K05096; K05097; K04443; K08847; K01728; K04372; K05688; K05121; K13304; K13303; K02486; K08853; K04688; K02178; K07675;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093927.1 1 511 evalue:4.6e-225 qcov:99.40 identity:83.80;
kegg_pathway_id 04110; 04150; 00040; 05012; 04010; 04011; 02020; 04510; 00230; 04640; 04140; 04111; 04360;
kegg_pathway_name Cell cycle; mTOR signaling pathway; Pentose and glucuronate interconversions; Parkinson's disease; MAPK signaling pathway; MAPK signaling pathway - yeast; Two-component system - General; Focal adhesion; Purine metabolism; Hematopoietic cell lineage; Regulation of autophagy; Cell cycle - yeast; Axon guidance;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF06293; PF00069; PF07714;
pfam_desc Lipopolysaccharide kinase (Kdo/WaaP) family; Protein kinase domain; Protein tyrosine kinase;
pfam_id Kdo; Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF06293.14 evalue:4.8e-05 score:22.0 best_domain_score:21.2 name:Kdo; db:Pfam-A.hmm|PF00069.25 evalue:5.6e-41 score:139.9 best_domain_score:139.5 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:2.8e-22 score:78.5 best_domain_score:78.0 name:Pkinase_Tyr;
tm_num 2;
52463 50919 transmembrane_helix
ID metaerg.pl|11893
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology o51510-51578i51876-51944o;
54588 52828 CDS
ID metaerg.pl|11894
allec_ids 2.2.1.9;
allgo_ids GO:0030976; GO:0070204; GO:0000287; GO:0030145; GO:0009234; GO:0042372;
allko_ids K01652; K02551;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093928.1 3 586 evalue:0.0e+00 qcov:99.70 identity:89.60;
kegg_pathway_id 00290; 00130; 00770; 00660; 00650;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Ubiquinone biosynthesis; Pantothenate and CoA biosynthesis; C5-Branched dibasic acid metabolism; Butanoate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
metacyc_pathway_id PWY-5840; ALL-CHORISMATE-PWY; PWY-5897; PWY-5837; PWY-5896; PWY-5845; PWY-5862; PWY-5860; PWY-5791; PWY-5861; PWY-5838; PWY-5898; PWY-5850; PWY-5863; PWY-5899;
metacyc_pathway_name superpathway of menaquinol-7 biosynthesis;; superpathway of chorismate metabolism;; superpathway of menaquinol-11 biosynthesis;; 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-6 biosynthesis I;; ; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-8 biosynthesis I;; superpathway of menaquinol-12 biosynthesis;; superpathway of menaquinol-6 biosynthesis I;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-13 biosynthesis;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; DHNA-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; ; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF16582; PF02776;
pfam_desc Middle domain of thiamine pyrophosphate; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain;
pfam_id TPP_enzyme_M_2; TPP_enzyme_N;
pfam_target db:Pfam-A.hmm|PF16582.5 evalue:1.1e-19 score:70.3 best_domain_score:69.7 name:TPP_enzyme_M_2; db:Pfam-A.hmm|PF02776.18 evalue:1e-34 score:118.8 best_domain_score:118.0 name:TPP_enzyme_N;
sprot_desc 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;
sprot_id sp|Q8YZZ2|MEND_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YZZ2|MEND_NOSS1 7 583 evalue:1.0e-267 qcov:98.50 identity:75.50;
tigrfam_acc TIGR00173;
tigrfam_desc 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name menD;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR00173 evalue:2.9e-148 score:493.8 best_domain_score:493.6 name:TIGR00173;
54700 55068 CDS
ID metaerg.pl|11895
allec_ids 4.1.2.25;
allgo_ids GO:0004150; GO:0006760; GO:0046656; GO:0046654;
allko_ids K01633;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091217.1 1 122 evalue:4.5e-62 qcov:100.00 identity:99.20;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
metacyc_pathway_id PWY-6147; ALL-CHORISMATE-PWY; FOLSYN-PWY;
metacyc_pathway_name 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; superpathway of chorismate metabolism;; superpathway of tetrahydrofolate biosynthesis and salvage;;
metacyc_pathway_type 6-HM-Dihydropterin-PP-Biosynthesis;; Super-Pathways;; Folate-Biosynthesis; Super-Pathways;;
pfam_acc PF02152;
pfam_desc Dihydroneopterin aldolase;
pfam_id FolB;
pfam_target db:Pfam-A.hmm|PF02152.18 evalue:2e-31 score:108.0 best_domain_score:107.9 name:FolB;
sprot_desc Probable dihydroneopterin aldolase;
sprot_id sp|P74342|FOLB_SYNY3;
sprot_target db:uniprot_sprot|sp|P74342|FOLB_SYNY3 1 119 evalue:2.8e-26 qcov:97.50 identity:44.50;
tigrfam_acc TIGR00525; TIGR00526;
tigrfam_desc dihydroneopterin aldolase; FolB domain;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name folB; folB_dom;
tigrfam_sub1role Folic acid;
tigrfam_target db:TIGRFAMs.hmm|TIGR00525 evalue:5.4e-27 score:93.7 best_domain_score:93.6 name:TIGR00525; db:TIGRFAMs.hmm|TIGR00526 evalue:7.8e-26 score:89.8 best_domain_score:89.6 name:TIGR00526;
56678 55497 CDS
ID metaerg.pl|11896
allec_ids 3.1.1.-;
allgo_ids GO:0006629; GO:0005737; GO:0047372; GO:0004620; GO:0006952; GO:0016042; GO:0009737;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091218.1 1 393 evalue:5.2e-200 qcov:100.00 identity:89.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
metacyc_pathway_id PWY0-1300; PWY-6519; LIPAS-PWY; PWY-6558; BIOTIN-BIOSYNTHESIS-PWY;
metacyc_pathway_name 2-O-α-mannosyl-D-glycerate degradation;; 8-amino-7-oxononanoate biosynthesis I;; triacylglycerol degradation;; heparan sulfate biosynthesis (late stages);; biotin biosynthesis I;;
metacyc_pathway_type Sugars-And-Polysaccharides-Degradation;; 7-Keto-8-aminopelargonate-Biosynthesis;; Fatty-Acid-and-Lipid-Degradation;; Glycosaminoglycans-Biosynthesis;; BIOTIN-SYN; Super-Pathways;;
pfam_acc PF01734;
pfam_desc Patatin-like phospholipase;
pfam_id Patatin;
pfam_target db:Pfam-A.hmm|PF01734.22 evalue:1.7e-20 score:73.3 best_domain_score:70.1 name:Patatin;
sprot_desc Patatin-like protein 3;
sprot_id sp|O23181|PLP3_ARATH;
sprot_target db:uniprot_sprot|sp|O23181|PLP3_ARATH 5 378 evalue:3.9e-21 qcov:95.20 identity:25.00;
57268 56888 CDS
ID metaerg.pl|11897
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091220.1 1 125 evalue:2.3e-56 qcov:99.20 identity:87.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF11535;
pfam_desc Calcium binding;
pfam_id Calci_bind_CcbP;
pfam_target db:Pfam-A.hmm|PF11535.8 evalue:9.4e-39 score:131.4 best_domain_score:131.2 name:Calci_bind_CcbP;
57966 57328 CDS
ID metaerg.pl|11898
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091221.1 1 212 evalue:1.4e-103 qcov:100.00 identity:88.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF05685;
pfam_desc Putative restriction endonuclease;
pfam_id Uma2;
pfam_target db:Pfam-A.hmm|PF05685.12 evalue:1.3e-22 score:79.4 best_domain_score:79.1 name:Uma2;
59655 58030 CDS
ID metaerg.pl|11899
allgo_ids GO:0016491; GO:0055114; GO:0003677; GO:0034648; GO:0034720;
allko_ids K19413;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Chlorogloeopsis;s__Chlorogloeopsis fritschii;
genomedb_acc GCF_000317285.1;
genomedb_target db:genomedb|GCF_000317285.1|WP_016873881.1 1 535 evalue:1.4e-227 qcov:98.90 identity:71.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF01593; PF00890; PF13450;
pfam_desc Flavin containing amine oxidoreductase; FAD binding domain; NAD(P)-binding Rossmann-like domain;
pfam_id Amino_oxidase; FAD_binding_2; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:5e-52 score:176.9 best_domain_score:175.7 name:Amino_oxidase; db:Pfam-A.hmm|PF00890.24 evalue:4e-05 score:22.1 best_domain_score:18.4 name:FAD_binding_2; db:Pfam-A.hmm|PF13450.6 evalue:8.5e-12 score:44.4 best_domain_score:43.4 name:NAD_binding_8;
sprot_desc Amine oxidase family member 1;
sprot_id sp|Q21988|AMX1_CAEEL;
sprot_target db:uniprot_sprot|sp|Q21988|AMX1_CAEEL 85 540 evalue:3.4e-15 qcov:84.30 identity:25.70;
60437 59799 CDS
ID metaerg.pl|11900
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091221.1 1 212 evalue:8.1e-107 qcov:100.00 identity:90.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF05685;
pfam_desc Putative restriction endonuclease;
pfam_id Uma2;
pfam_target db:Pfam-A.hmm|PF05685.12 evalue:1.2e-21 score:76.3 best_domain_score:75.9 name:Uma2;
60768 61016 CDS
ID metaerg.pl|11901
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091222.1 9 82 evalue:2.2e-12 qcov:90.20 identity:56.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
tm_num 1;
60768 61016 transmembrane_helix
ID metaerg.pl|11902
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology o60861-60914i;
61221 62159 CDS
ID metaerg.pl|11903
allec_ids 2.7.1.15;
allgo_ids GO:0052855; GO:0005737; GO:0005524; GO:0046872; GO:0004747; GO:0019303;
allko_ids K00852;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194684.1 1 305 evalue:2.1e-148 qcov:97.80 identity:91.80;
kegg_pathway_id 00030;
kegg_pathway_name Pentose phosphate pathway;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
metacyc_pathway_id RIBOKIN-PWY;
metacyc_pathway_name ribose phosphorylation;;
metacyc_pathway_type Sugars-And-Polysaccharides-Degradation;;
pfam_acc PF01256; PF00294; PF08543;
pfam_desc Carbohydrate kinase; pfkB family carbohydrate kinase; Phosphomethylpyrimidine kinase;
pfam_id Carb_kinase; PfkB; Phos_pyr_kin;
pfam_target db:Pfam-A.hmm|PF01256.17 evalue:0.00012 score:20.9 best_domain_score:19.9 name:Carb_kinase; db:Pfam-A.hmm|PF00294.24 evalue:3.2e-74 score:249.2 best_domain_score:249.0 name:PfkB; db:Pfam-A.hmm|PF08543.12 evalue:2.5e-12 score:46.0 best_domain_score:44.6 name:Phos_pyr_kin;
sprot_desc Ribokinase;
sprot_id sp|P0A9J7|RBSK_ECO57;
sprot_target db:uniprot_sprot|sp|P0A9J7|RBSK_ECO57 2 302 evalue:3.1e-53 qcov:96.50 identity:42.90;
tigrfam_acc TIGR02152;
tigrfam_desc ribokinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name D_ribokin_bact;
tigrfam_sub1role Sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR02152 evalue:5.9e-101 score:336.9 best_domain_score:336.6 name:TIGR02152;
62625 62194 CDS
ID metaerg.pl|11904
allec_ids 3.5.4.1;
allgo_ids GO:0002100; GO:0008251; GO:0102480; GO:0004131; GO:0008270; GO:0019858; GO:0044206;
allko_ids K01485;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091224.1 1 143 evalue:2.5e-75 qcov:100.00 identity:97.90;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
metacyc_pathway_id PWY0-163;
metacyc_pathway_name ;
metacyc_pathway_type ;
pfam_acc PF00383; PF14437;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase;
pfam_id dCMP_cyt_deam_1; MafB19-deam;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:2.4e-22 score:77.9 best_domain_score:77.6 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:2.6e-22 score:78.3 best_domain_score:78.1 name:MafB19-deam;
sprot_desc Cytosine deaminase;
sprot_id sp|P78594|FCA1_CANAX;
sprot_target db:uniprot_sprot|sp|P78594|FCA1_CANAX 5 143 evalue:3.1e-32 qcov:97.20 identity:43.70;
62641 63564 CDS
ID metaerg.pl|11905
allko_ids K01239;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194686.1 1 307 evalue:3.4e-167 qcov:100.00 identity:95.40;
kegg_pathway_id 00760; 00230;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF01156;
pfam_desc Inosine-uridine preferring nucleoside hydrolase;
pfam_id IU_nuc_hydro;
pfam_target db:Pfam-A.hmm|PF01156.19 evalue:4.1e-50 score:170.3 best_domain_score:170.0 name:IU_nuc_hydro;
64521 63700 CDS
ID metaerg.pl|11906
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium johnsoniae_A;
genomedb_acc GCF_001879205.1;
genomedb_target db:genomedb|GCF_001879205.1|WP_071637869.1 11 272 evalue:1.4e-66 qcov:96.00 identity:47.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF10053;
pfam_desc Uncharacterized conserved protein (DUF2290);
pfam_id DUF2290;
pfam_target db:Pfam-A.hmm|PF10053.9 evalue:1.5e-11 score:43.4 best_domain_score:28.4 name:DUF2290;
66715 64478 CDS
ID metaerg.pl|11907
allgo_ids GO:0003677; GO:0005524; GO:0016787;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium;s__Flavobacterium johnsoniae_A;
genomedb_acc GCF_001879205.1;
genomedb_target db:genomedb|GCF_001879205.1|WP_071637868.1 2 745 evalue:7.0e-198 qcov:99.90 identity:48.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF13245; PF09848; PF04851; PF00580; PF13538;
pfam_desc AAA domain; Uncharacterized conserved protein (DUF2075); Type III restriction enzyme, res subunit; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain;
pfam_id AAA_19; DUF2075; ResIII; UvrD-helicase; UvrD_C_2;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:3e-06 score:26.8 best_domain_score:23.6 name:AAA_19; db:Pfam-A.hmm|PF09848.9 evalue:9.2e-07 score:27.6 best_domain_score:24.9 name:DUF2075; db:Pfam-A.hmm|PF04851.15 evalue:2.3e-07 score:30.2 best_domain_score:25.0 name:ResIII; db:Pfam-A.hmm|PF00580.21 evalue:1.9e-06 score:26.9 best_domain_score:23.8 name:UvrD-helicase; db:Pfam-A.hmm|PF13538.6 evalue:2.4e-07 score:29.7 best_domain_score:28.7 name:UvrD_C_2;
68462 67173 CDS
ID metaerg.pl|11908
allec_ids 1.4.1.3;
allgo_ids GO:0006520; GO:0016491; GO:0055114; GO:0004353;
allko_ids K00263; K00261; K00262; K00260;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194687.1 1 429 evalue:1.3e-233 qcov:100.00 identity:96.50;
kegg_pathway_id 00471; 00330; 00290; 00251; 00910; 00280;
kegg_pathway_name D-Glutamine and D-glutamate metabolism; Arginine and proline metabolism; Valine, leucine and isoleucine biosynthesis; Glutamate metabolism; Nitrogen metabolism; Valine, leucine and isoleucine degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
metacyc_pathway_id PWY-5766; ARGININE-SYN4-PWY; PWY-5505; GLUTAMATE-SYN2-PWY;
metacyc_pathway_name L-glutamate degradation X;; L-ornithine biosynthesis II;; L-glutamate and L-glutamine biosynthesis;; L-glutamate biosynthesis II;;
metacyc_pathway_type GLUTAMATE-DEG;; L-Ornithine-Biosynthesis;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;; GLUTAMATE-SYN;;
pfam_acc PF00208; PF02812;
pfam_desc Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF00208.21 evalue:8.4e-76 score:254.1 best_domain_score:253.8 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:1.1e-56 score:189.5 best_domain_score:188.8 name:ELFV_dehydrog_N;
sprot_desc Glutamate dehydrogenase;
sprot_id sp|P96110|DHE3_THEMA;
sprot_target db:uniprot_sprot|sp|P96110|DHE3_THEMA 20 429 evalue:1.0e-107 qcov:95.60 identity:47.90;
70097 68619 CDS
ID metaerg.pl|11909
allec_ids 1.13.11.75;
allgo_ids GO:0016702; GO:0055114; GO:0102162; GO:0010436; GO:0046872; GO:0016121;
allko_ids K00464;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194689.1 1 492 evalue:7.2e-292 qcov:100.00 identity:95.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF03055;
pfam_desc Retinal pigment epithelial membrane protein;
pfam_id RPE65;
pfam_target db:Pfam-A.hmm|PF03055.15 evalue:2.1e-136 score:455.1 best_domain_score:454.9 name:RPE65;
sprot_desc Apocarotenoid-15,15'-oxygenase;
sprot_id sp|P74334|ACOX_SYNY3;
sprot_target db:uniprot_sprot|sp|P74334|ACOX_SYNY3 13 488 evalue:9.8e-179 qcov:96.70 identity:57.20;
71584 70187 CDS
ID metaerg.pl|11910
allgo_ids GO:0016021; GO:0055085; GO:0005886; GO:0015231; GO:0008517; GO:0015350; GO:0015885; GO:0015884; GO:0051958;
allko_ids K08217;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091173.1 1 465 evalue:3.7e-245 qcov:100.00 identity:96.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF03092; PF07690; PF13347; PF03209;
pfam_desc BT1 family; Major Facilitator Superfamily; MFS/sugar transport protein; PUCC protein;
pfam_id BT1; MFS_1; MFS_2; PUCC;
pfam_target db:Pfam-A.hmm|PF03092.16 evalue:1.5e-110 score:369.2 best_domain_score:202.4 name:BT1; db:Pfam-A.hmm|PF07690.16 evalue:1.3e-19 score:69.5 best_domain_score:69.5 name:MFS_1; db:Pfam-A.hmm|PF13347.6 evalue:7.5e-15 score:53.6 best_domain_score:53.6 name:MFS_2; db:Pfam-A.hmm|PF03209.15 evalue:9.5e-07 score:27.4 best_domain_score:26.2 name:PUCC;
sprot_desc Folate-biopterin transporter;
sprot_id sp|Q55721|FBT_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55721|FBT_SYNY3 9 441 evalue:9.7e-144 qcov:93.10 identity:62.40;
tigrfam_acc TIGR00788;
tigrfam_desc folate/biopterin transporter;
tigrfam_mainrole Cell envelope;
tigrfam_name fbt;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00788 evalue:1.4e-134 score:448.7 best_domain_score:448.2 name:TIGR00788;
tm_num 12;
71584 70187 transmembrane_helix
ID metaerg.pl|11911
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i70244-70312o70370-70438i70475-70543o70556-70624i70661-70729o70757-70816i70916-70984o71027-71080i71114-71173o71231-71299i71318-71386o71423-71491i;
71806 73686 CDS
ID metaerg.pl|11912
allgo_ids GO:0004672; GO:0005524; GO:0006468;
allko_ids K01768; K08286; K05098; K04373; K08809; K05097; K05096; K04445; K02480; K04372; K04443; K07675; K02178; K05688; K04688; K02486; K11265; K07673; K03407; K07682; K04442; K08810; K08884; K07778; K07683; K08790; K04444; K08282; K08333;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804461.1 1 624 evalue:2.9e-306 qcov:99.70 identity:82.10;
kegg_pathway_id 02020; 04010; 04110; 05012; 04150; 04111; 04140; 00230; 04510;
kegg_pathway_name Two-component system - General; MAPK signaling pathway; Cell cycle; Parkinson's disease; mTOR signaling pathway; Cell cycle - yeast; Regulation of autophagy; Purine metabolism; Focal adhesion;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF01636; PF03781; PF00069; PF07714;
pfam_desc Phosphotransferase enzyme family; Sulfatase-modifying factor enzyme 1; Protein kinase domain; Protein tyrosine kinase;
pfam_id APH; FGE-sulfatase; Pkinase; Pkinase_Tyr;
pfam_target db:Pfam-A.hmm|PF01636.23 evalue:9.8e-07 score:28.2 best_domain_score:13.1 name:APH; db:Pfam-A.hmm|PF03781.16 evalue:3.9e-59 score:199.6 best_domain_score:197.3 name:FGE-sulfatase; db:Pfam-A.hmm|PF00069.25 evalue:1.4e-31 score:109.0 best_domain_score:108.5 name:Pkinase; db:Pfam-A.hmm|PF07714.17 evalue:4.9e-14 score:51.5 best_domain_score:51.0 name:Pkinase_Tyr;
73764 74075 CDS
ID metaerg.pl|11913
allgo_ids GO:0016779;
allko_ids K07075;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804463.1 1 103 evalue:3.5e-47 qcov:100.00 identity:93.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF01909; PF18765;
pfam_desc Nucleotidyltransferase domain; Polymerase beta, Nucleotidyltransferase;
pfam_id NTP_transf_2; Polbeta;
pfam_target db:Pfam-A.hmm|PF01909.23 evalue:3.8e-11 score:42.4 best_domain_score:42.0 name:NTP_transf_2; db:Pfam-A.hmm|PF18765.1 evalue:8.6e-09 score:34.6 best_domain_score:34.1 name:Polbeta;
sprot_desc hypothetical protein;
sprot_id sp|Q57877|Y435_METJA;
sprot_target db:uniprot_sprot|sp|Q57877|Y435_METJA 13 101 evalue:1.2e-09 qcov:86.40 identity:39.30;
74072 74413 CDS
ID metaerg.pl|11914
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804464.1 1 112 evalue:6.3e-58 qcov:99.10 identity:96.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF01934;
pfam_desc Protein of unknown function DUF86;
pfam_id DUF86;
pfam_target db:Pfam-A.hmm|PF01934.17 evalue:9.6e-27 score:92.5 best_domain_score:92.2 name:DUF86;
75571 74414 CDS
ID metaerg.pl|11915
allec_ids 2.3.1.179;
allgo_ids GO:0016747; GO:0005829; GO:0004315; GO:0033817; GO:0006633;
allko_ids K09458;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804465.1 1 385 evalue:1.7e-208 qcov:100.00 identity:96.60;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
metacyc_pathway_id PWY-6113; PWY-6285; PWY-5973; PWYG-321;
metacyc_pathway_name superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; cis-vaccenate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Unsaturated-Fatty-Acids-Biosynthesis;; Fatty-acid-biosynthesis;;
pfam_acc PF00109; PF02801; PF02803;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Thiolase, C-terminal domain;
pfam_id ketoacyl-synt; Ketoacyl-synt_C; Thiolase_C;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:2.3e-29 score:101.9 best_domain_score:81.5 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:8.3e-32 score:108.9 best_domain_score:108.7 name:Ketoacyl-synt_C; db:Pfam-A.hmm|PF02803.18 evalue:5.3e-05 score:22.1 best_domain_score:20.7 name:Thiolase_C;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] synthase 2;
sprot_id sp|O34340|FABF_BACSU;
sprot_target db:uniprot_sprot|sp|O34340|FABF_BACSU 2 385 evalue:1.3e-56 qcov:99.70 identity:36.40;
76564 75785 CDS
ID metaerg.pl|11916
allec_ids 5.2.1.8;
allgo_ids GO:0000413; GO:0003755; GO:0030288; GO:0006457;
allko_ids K03768;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091170.1 1 259 evalue:5.2e-132 qcov:100.00 identity:93.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF00160;
pfam_desc Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD;
pfam_id Pro_isomerase;
pfam_target db:Pfam-A.hmm|PF00160.21 evalue:2.8e-43 score:147.1 best_domain_score:146.6 name:Pro_isomerase;
sp YES;
sprot_desc Probable peptidyl-prolyl cis-trans isomerase sll0227;
sprot_id sp|P72704|PPI1_SYNY3;
sprot_target db:uniprot_sprot|sp|P72704|PPI1_SYNY3 8 256 evalue:5.4e-51 qcov:96.10 identity:50.80;
75785 75850 lipoprotein_signal_peptide
ID metaerg.pl|11917
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
77365 76724 CDS
ID metaerg.pl|11918
allgo_ids GO:0009522; GO:0009579; GO:0015979; GO:0016021; GO:0042651;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_044482863.1 16 213 evalue:3.8e-104 qcov:93.00 identity:95.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF02392;
pfam_desc Ycf4;
pfam_id Ycf4;
pfam_target db:Pfam-A.hmm|PF02392.16 evalue:2.7e-85 score:283.7 best_domain_score:283.5 name:Ycf4;
sprot_desc Photosystem I assembly protein Ycf4;
sprot_id sp|Q8YPA9|YCF4_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YPA9|YCF4_NOSS1 16 213 evalue:5.9e-96 qcov:93.00 identity:86.40;
tm_num 2;
77365 76724 transmembrane_helix
ID metaerg.pl|11919
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i76874-76942o77000-77068i;
77765 78706 CDS
ID metaerg.pl|11920
allec_ids 1.10.3.9;
allgo_ids GO:0009772; GO:0019684; GO:0045156; GO:0016021; GO:0009523; GO:0042651; GO:0016168; GO:0005506; GO:0018298;
allko_ids K02706;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090920.1 1 314 evalue:1.7e-177 qcov:100.00 identity:98.10;
kegg_pathway_id 00195;
kegg_pathway_name Photosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
pfam_acc PF00124;
pfam_desc Photosynthetic reaction centre protein;
pfam_id Photo_RC;
pfam_target db:Pfam-A.hmm|PF00124.19 evalue:5e-75 score:251.3 best_domain_score:251.1 name:Photo_RC;
sprot_desc Photosystem II D2 protein;
sprot_id sp|Q8XFA5|PSBD_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8XFA5|PSBD_NOSS1 1 314 evalue:3.4e-177 qcov:100.00 identity:95.90;
tigrfam_acc TIGR01152;
tigrfam_desc photosystem II D2 protein (photosystem q(a) protein);
tigrfam_mainrole Energy metabolism;
tigrfam_name psbD;
tigrfam_sub1role Photosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01152 evalue:5.4e-204 score:676.2 best_domain_score:676.1 name:TIGR01152;
tm_num 6;
77765 78706 transmembrane_helix
ID metaerg.pl|11921
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 72.0487; 0.0250897; 0.00308053; 72.0041; 0.0164974;
topology i77843-77911o78077-78145i78182-78250o78263-78316i78350-78418o78569-78637i;
>Feature NODE_91_length_78468_cov_15.4801
722 318 CDS
ID metaerg.pl|11922
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__SBR1031;f__A4b;g__GCA-2699585;s__GCA-2699585 sp002699585;
genomedb_acc GCA_002699585.1;
genomedb_target db:genomedb|GCA_002699585.1|MAU10579.1 1 131 evalue:3.3e-37 qcov:97.80 identity:55.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF18029;
pfam_desc Glyoxalase-like domain;
pfam_id Glyoxalase_6;
pfam_target db:Pfam-A.hmm|PF18029.1 evalue:3.5e-06 score:27.0 best_domain_score:26.6 name:Glyoxalase_6;
931 1221 CDS
ID metaerg.pl|11923
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668940.1 13 96 evalue:7.8e-25 qcov:87.50 identity:75.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
2309 1929 CDS
ID metaerg.pl|11924
allgo_ids GO:0008270;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora coriariae;
genomedb_acc GCF_900091455.1;
genomedb_target db:genomedb|GCF_900091455.1|WP_089021388.1 13 124 evalue:1.5e-23 qcov:88.90 identity:54.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF01258;
pfam_desc Prokaryotic dksA/traR C4-type zinc finger;
pfam_id zf-dskA_traR;
pfam_target db:Pfam-A.hmm|PF01258.17 evalue:7.3e-09 score:34.7 best_domain_score:32.4 name:zf-dskA_traR;
2398 3573 CDS
ID metaerg.pl|11925
allec_ids 2.6.1.83;
allgo_ids GO:0009058; GO:0030170; GO:0010285; GO:0033362;
allko_ids K00825; K10206;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666387.1 1 390 evalue:8.0e-185 qcov:99.70 identity:79.00;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-724; PWY-5097;
metacyc_pathway_name superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-lysine biosynthesis VI;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:2.1e-46 score:158.0 best_domain_score:157.7 name:Aminotran_1_2;
sprot_desc LL-diaminopimelate aminotransferase;
sprot_id sp|B1I544|DAPAT_DESAP;
sprot_target db:uniprot_sprot|sp|B1I544|DAPAT_DESAP 8 384 evalue:1.1e-58 qcov:96.40 identity:37.10;
4835 3669 CDS
ID metaerg.pl|11926
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441485.1 20 364 evalue:2.0e-71 qcov:88.90 identity:48.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF04018;
pfam_desc Domain of unknown function (DUF368);
pfam_id DUF368;
pfam_target db:Pfam-A.hmm|PF04018.13 evalue:2.8e-64 score:216.3 best_domain_score:215.7 name:DUF368;
tm_num 9;
4835 3669 transmembrane_helix
ID metaerg.pl|11927
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
topology o3912-3980i4068-4136o4179-4232i4251-4310o4320-4388i4392-4445o4473-4541i4560-4616o4674-4742i;
4991 6043 CDS
ID metaerg.pl|11928
allec_ids 2.3.1.117;
allgo_ids GO:0005737; GO:0008666; GO:0000287; GO:0019877; GO:0009089;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666383.1 6 350 evalue:7.5e-126 qcov:98.60 identity:69.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id P4-PWY; DAPLYSINESYN-PWY; PWY0-781;
metacyc_pathway_name superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; L-lysine biosynthesis I;; aspartate superpathway;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Super-Pathways;;
pfam_acc PF00132; PF14602; PF14789;
pfam_desc Bacterial transferase hexapeptide (six repeats); Hexapeptide repeat of succinyl-transferase; Tetrahydrodipicolinate N-succinyltransferase middle;
pfam_id Hexapep; Hexapep_2; THDPS_M;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:4.7e-05 score:22.2 best_domain_score:15.3 name:Hexapep; db:Pfam-A.hmm|PF14602.6 evalue:4.7e-13 score:47.9 best_domain_score:47.2 name:Hexapep_2; db:Pfam-A.hmm|PF14789.6 evalue:1e-17 score:63.2 best_domain_score:62.4 name:THDPS_M;
sprot_desc 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase;
sprot_id sp|Q7U0E7|DAPD_MYCBO;
sprot_target db:uniprot_sprot|sp|Q7U0E7|DAPD_MYCBO 2 349 evalue:2.5e-96 qcov:99.40 identity:59.50;
6084 7355 CDS
ID metaerg.pl|11929
allec_ids 3.5.1.18;
allgo_ids GO:0016787; GO:0046872; GO:0008237; GO:0009014; GO:0019877; GO:0009089;
allko_ids K01439;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441483.1 1 384 evalue:3.3e-152 qcov:90.80 identity:73.00;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY0-781; DAPLYSINESYN-PWY; P4-PWY;
metacyc_pathway_name aspartate superpathway;; L-lysine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;;
metacyc_pathway_type Super-Pathways;; LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:1.4e-11 score:43.5 best_domain_score:42.4 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:1.4e-19 score:69.8 best_domain_score:69.2 name:Peptidase_M20;
sprot_desc Putative succinyl-diaminopimelate desuccinylase DapE;
sprot_id sp|P9WHS8|DAPE_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WHS8|DAPE_MYCTO 33 383 evalue:4.8e-41 qcov:83.00 identity:35.30;
tigrfam_acc TIGR01900;
tigrfam_desc succinyl-diaminopimelate desuccinylase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapE-gram_pos;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01900 evalue:3.2e-96 score:321.4 best_domain_score:321.1 name:TIGR01900;
7352 8059 CDS
ID metaerg.pl|11930
allec_ids 3.1.3.71;
allgo_ids GO:0000287; GO:0050532; GO:0050545;
allko_ids K05979;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666381.1 6 223 evalue:2.7e-71 qcov:92.80 identity:70.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id P261-PWY;
metacyc_pathway_name coenzyme M biosynthesis I;;
metacyc_pathway_type Coenzyme-M-Biosynthesis;;
pfam_acc PF04029;
pfam_desc 2-phosphosulpholactate phosphatase;
pfam_id 2-ph_phosp;
pfam_target db:Pfam-A.hmm|PF04029.14 evalue:1.2e-35 score:122.0 best_domain_score:121.6 name:2-ph_phosp;
sprot_desc Probable 2-phosphosulfolactate phosphatase;
sprot_id sp|Q9F3E6|COMB_STRCO;
sprot_target db:uniprot_sprot|sp|Q9F3E6|COMB_STRCO 2 221 evalue:4.7e-30 qcov:93.60 identity:44.10;
8252 9067 CDS
ID metaerg.pl|11931
allgo_ids GO:0015267; GO:0016020; GO:0055085;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__Palsa-459;s__Palsa-459 sp003135595;
genomedb_acc GCA_003135595.1;
genomedb_target db:genomedb|GCA_003135595.1|PLCI01000089.1_10 9 231 evalue:4.3e-44 qcov:82.30 identity:52.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF00230;
pfam_desc Major intrinsic protein;
pfam_id MIP;
pfam_target db:Pfam-A.hmm|PF00230.20 evalue:4.4e-20 score:71.6 best_domain_score:56.2 name:MIP;
sp YES;
tm_num 6;
8252 8353 signal_peptide
ID metaerg.pl|11932
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
8252 9067 transmembrane_helix
ID metaerg.pl|11933
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
topology i8288-8356o8387-8455i8492-8560o8618-8686i8705-8773o8837-8905i;
9113 9760 CDS
ID metaerg.pl|11934
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycobacterium;s__Mycobacterium branderi;
genomedb_acc GCF_002086575.1;
genomedb_target db:genomedb|GCF_002086575.1|WP_083129483.1 17 214 evalue:4.1e-66 qcov:92.10 identity:62.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF12085; PF01451;
pfam_desc Protein of unknown function (DUF3562); Low molecular weight phosphotyrosine protein phosphatase;
pfam_id DUF3562; LMWPc;
pfam_target db:Pfam-A.hmm|PF12085.8 evalue:1.3e-06 score:27.1 best_domain_score:27.1 name:DUF3562; db:Pfam-A.hmm|PF01451.21 evalue:1.1e-19 score:70.4 best_domain_score:69.6 name:LMWPc;
10536 9856 CDS
ID metaerg.pl|11935
allec_ids 2.1.1.-;
allgo_ids GO:0008171; GO:0046872;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667362.1 3 220 evalue:3.2e-69 qcov:96.50 identity:64.20;
kegg_pathway_id 00626; 00450; 00380; 00150; 00340; 00350;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tryptophan metabolism; Androgen and estrogen metabolism; Histidine metabolism; Tyrosine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-5116; PWY-1581; CO2FORM-PWY; PWY-6519; PWY-5773; PWY-5328; METHIONINE-DEG1-PWY; PWY-6427; PWY-6395; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-6292; PWY-5987; PWY-5479; PWY-6151; PWY-5209; PWY-5855; PWY-6303; PWY-5857; METH-ACETATE-PWY; PWY-6424; PWY-6154; UBISYN-PWY; PWY-6142; PWY-5856; PWY-1061; PWY-5876; PWY-5864; PWY-5975; PWY-5729; PWY-6113; PWYG-321; PWY-5305; PWY-1422; PWY-5467; PWY-6477; CODH-PWY; PWY-6442; PWY-6575; PWY-4021; PWY-5041; PWY-6153; PWY-3542; ALL-CHORISMATE-PWY;
metacyc_pathway_name sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; xanthohumol biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; S-adenosyl-L-methionine cycle I;; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; methanogenesis from acetate;; ; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; bixin biosynthesis;; vitamin E biosynthesis (tocopherols);; gramine biosynthesis;; gibberellin inactivation II (methylation);; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; autoinducer AI-2 biosynthesis I;; choline biosynthesis II;; superpathway of chorismate metabolism;;
metacyc_pathway_type FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; CYSTEINE-SYN; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; S-adenosyl-L-methionine-cycle; Super-Pathways;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; ; Autoinducer-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; APOCAROTENOID-SYN;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; INDOLE-ALKALOIDS;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Autotrophic-CO2-Fixation;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Autoinducer-Biosynthesis;; Choline-Biosynthesis;; Super-Pathways;;
pfam_acc PF13578; PF01596; PF13847; PF01135;
pfam_desc Methyltransferase domain; O-methyltransferase; Methyltransferase domain; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
pfam_id Methyltransf_24; Methyltransf_3; Methyltransf_31; PCMT;
pfam_target db:Pfam-A.hmm|PF13578.6 evalue:4.1e-21 score:75.2 best_domain_score:74.4 name:Methyltransf_24; db:Pfam-A.hmm|PF01596.17 evalue:2.8e-39 score:133.8 best_domain_score:133.4 name:Methyltransf_3; db:Pfam-A.hmm|PF13847.6 evalue:1.1e-06 score:27.8 best_domain_score:27.4 name:Methyltransf_31; db:Pfam-A.hmm|PF01135.19 evalue:5e-09 score:35.5 best_domain_score:35.1 name:PCMT;
sprot_desc O-methyltransferase imqG;
sprot_id sp|B8NI24|IMQG_ASPFN;
sprot_target db:uniprot_sprot|sp|B8NI24|IMQG_ASPFN 2 220 evalue:2.5e-28 qcov:96.90 identity:37.60;
10706 11410 CDS
ID metaerg.pl|11936
allec_ids 1.1.1.153;
allgo_ids GO:0005737; GO:0004757; GO:0010033; GO:0006729;
allko_ids K00072;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441405.1 1 228 evalue:7.6e-74 qcov:97.40 identity:66.20;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-5663;
metacyc_pathway_name erythro-tetrahydrobiopterin biosynthesis I;;
metacyc_pathway_type Tetrahydrobiopterin-Biosynthesis;;
pfam_acc PF00106; PF13561;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase;
pfam_id adh_short; adh_short_C2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:3.2e-36 score:123.9 best_domain_score:123.7 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:1.7e-25 score:89.2 best_domain_score:88.9 name:adh_short_C2;
sprot_desc Sepiapterin reductase;
sprot_id sp|P18297|SPRE_RAT;
sprot_target db:uniprot_sprot|sp|P18297|SPRE_RAT 5 189 evalue:8.9e-13 qcov:79.10 identity:35.00;
11407 12489 CDS
ID metaerg.pl|11937
allec_ids 2.4.99.17;
allgo_ids GO:0008616; GO:0016740; GO:0016853; GO:0005737;
allko_ids K07568;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669557.1 19 360 evalue:1.6e-110 qcov:95.00 identity:65.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF02547;
pfam_desc Queuosine biosynthesis protein;
pfam_id Queuosine_synth;
pfam_target db:Pfam-A.hmm|PF02547.15 evalue:3.7e-69 score:232.6 best_domain_score:232.2 name:Queuosine_synth;
sprot_desc S-adenosylmethionine:tRNA ribosyltransferase-isomerase;
sprot_id sp|Q72JS5|QUEA_THET2;
sprot_target db:uniprot_sprot|sp|Q72JS5|QUEA_THET2 19 359 evalue:5.4e-33 qcov:94.70 identity:34.00;
12620 14170 CDS
ID metaerg.pl|11938
allec_ids 6.5.1.1;
allgo_ids GO:0003910; GO:0006281; GO:0006310; GO:0005524; GO:0003677; GO:0046872; GO:0007049; GO:0051301; GO:0071897; GO:0051103; GO:0006260;
allko_ids K10747;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666380.1 1 514 evalue:6.6e-179 qcov:99.60 identity:66.00;
kegg_pathway_id 03430; 03420; 03030; 03410;
kegg_pathway_name Mismatch repair; Nucleotide excision repair; DNA replication; Base excision repair;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF04679; PF01068; PF04675;
pfam_desc ATP dependent DNA ligase C terminal region ; ATP dependent DNA ligase domain; DNA ligase N terminus;
pfam_id DNA_ligase_A_C; DNA_ligase_A_M; DNA_ligase_A_N;
pfam_target db:Pfam-A.hmm|PF04679.15 evalue:4e-12 score:45.8 best_domain_score:41.9 name:DNA_ligase_A_C; db:Pfam-A.hmm|PF01068.21 evalue:1.5e-45 score:154.6 best_domain_score:153.9 name:DNA_ligase_A_M; db:Pfam-A.hmm|PF04675.14 evalue:1.7e-11 score:44.0 best_domain_score:36.2 name:DNA_ligase_A_N;
sprot_desc Probable DNA ligase;
sprot_id sp|A7HID3|DNLI_ANADF;
sprot_target db:uniprot_sprot|sp|A7HID3|DNLI_ANADF 1 516 evalue:1.7e-149 qcov:100.00 identity:58.20;
tigrfam_acc TIGR00574;
tigrfam_desc DNA ligase I, ATP-dependent (dnl1);
tigrfam_mainrole DNA metabolism;
tigrfam_name dnl1;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00574 evalue:5.7e-78 score:262.0 best_domain_score:261.7 name:TIGR00574;
14782 14189 CDS
ID metaerg.pl|11939
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Porticoccaceae;g__Porticoccus;s__Porticoccus sp002733125;
genomedb_acc GCA_002733125.1;
genomedb_target db:genomedb|GCA_002733125.1|PHS74038.1 7 192 evalue:3.4e-35 qcov:94.40 identity:46.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:4.6e-25 score:88.0 best_domain_score:53.4 name:Usp;
14906 14820 tRNA
ID metaerg.pl|11940
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
name tRNA_???_gg;
15411 15052 CDS
ID metaerg.pl|11941
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
16544 15408 CDS
ID metaerg.pl|11942
allgo_ids GO:0016020; GO:0016021; GO:0005886; GO:0015297; GO:0015103; GO:0046685;
allko_ids K03325;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A denitrificans;
genomedb_acc GCF_002000365.1;
genomedb_target db:genomedb|GCF_002000365.1|WP_077279043.1 22 377 evalue:1.3e-144 qcov:94.20 identity:77.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF01758;
pfam_desc Sodium Bile acid symporter family;
pfam_id SBF;
pfam_target db:Pfam-A.hmm|PF01758.16 evalue:9.4e-45 score:151.9 best_domain_score:151.9 name:SBF;
sprot_desc Arsenical-resistance protein Acr3;
sprot_id sp|A6TP80|ACR3_ALKMQ;
sprot_target db:uniprot_sprot|sp|A6TP80|ACR3_ALKMQ 25 365 evalue:1.5e-115 qcov:90.20 identity:64.20;
tigrfam_acc TIGR00832;
tigrfam_desc arsenical-resistance protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name acr3;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00832 evalue:5.2e-115 score:383.4 best_domain_score:383.2 name:TIGR00832;
tm_num 10;
16544 15408 transmembrane_helix
ID metaerg.pl|11943
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
topology i15501-15569o15612-15680i15717-15785o15822-15890i15924-15992o16020-16088i16122-16190o16218-16286i16323-16391o16404-16472i;
16944 17369 CDS
ID metaerg.pl|11944
allgo_ids GO:0003700; GO:0006355;
casgene_acc COG0640_csa3_CAS-I-A;
casgene_name csa3;
casgene_target db:casgenes.hmm|COG0640_csa3_CAS-I-A evalue:1.9e-12 score:46.8 best_domain_score:46.3 name:csa3;
genomedb_OC d__Bacteria;p__Planctomycetota;c__Brocadiae;o__Brocadiales;f__2-02-FULL-50-16-A;g__2-12-FULL-52-36;s__2-12-FULL-52-36 sp001828545;
genomedb_acc GCA_001828545.1;
genomedb_target db:genomedb|GCA_001828545.1|OHB92982.1 17 125 evalue:5.3e-14 qcov:77.30 identity:40.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF12840; PF01022;
pfam_desc Helix-turn-helix domain; Bacterial regulatory protein, arsR family;
pfam_id HTH_20; HTH_5;
pfam_target db:Pfam-A.hmm|PF12840.7 evalue:1.9e-07 score:30.3 best_domain_score:29.4 name:HTH_20; db:Pfam-A.hmm|PF01022.20 evalue:3.7e-07 score:29.2 best_domain_score:28.6 name:HTH_5;
17585 18466 CDS
ID metaerg.pl|11945
allec_ids 7.3.2.1; 3.6.3.27;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015415; GO:0005315;
allko_ids K02049; K01995; K10111; K10112; K05816; K02036; K02023; K02000; K05847; K02010; K02052; K02006; K02017; K01996; K06861; K02071; K06021; K11072; K02045;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441081.1 1 293 evalue:2.5e-127 qcov:100.00 identity:80.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.7e-11 score:43.0 best_domain_score:20.7 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.8e-30 score:105.5 best_domain_score:104.9 name:ABC_tran;
sprot_desc Phosphate import ATP-binding protein PstB 1;
sprot_id sp|Q2JMJ0|PSTB1_SYNJB;
sprot_target db:uniprot_sprot|sp|Q2JMJ0|PSTB1_SYNJB 19 293 evalue:3.2e-100 qcov:93.90 identity:65.80;
tigrfam_acc TIGR00972;
tigrfam_desc phosphate ABC transporter, ATP-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3a0107s01c2;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00972 evalue:5.9e-116 score:385.2 best_domain_score:385.0 name:TIGR00972;
18952 20298 CDS
ID metaerg.pl|11946
allgo_ids GO:0003677; GO:0004803; GO:0006313;
genomedb_OC d__Bacteria;p__Firmicutes_E;c__Thermaerobacteria;o__Thermaerobacterales;f__Thermaerobacteraceae;g__Thermaerobacter;s__Thermaerobacter subterraneus;
genomedb_acc GCF_000183545.2;
genomedb_target db:genomedb|GCF_000183545.2|WP_006903612.1 1 443 evalue:3.3e-94 qcov:98.90 identity:45.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF01609; PF13751; PF05598;
pfam_desc domain; domain; Transposase domain (DUF772);
pfam_id DDE_Tnp_1; DDE_Tnp_1_6; DUF772;
pfam_target db:Pfam-A.hmm|PF01609.21 evalue:2.6e-09 score:36.3 best_domain_score:34.8 name:DDE_Tnp_1; db:Pfam-A.hmm|PF13751.6 evalue:2.2e-14 score:53.0 best_domain_score:52.0 name:DDE_Tnp_1_6; db:Pfam-A.hmm|PF05598.11 evalue:1.8e-15 score:55.9 best_domain_score:54.8 name:DUF772;
21508 20579 CDS
ID metaerg.pl|11947
allgo_ids GO:0016020; GO:0055085; GO:0005887; GO:0005315; GO:0035435;
allko_ids K02038; K02037;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669210.1 39 309 evalue:3.2e-112 qcov:87.70 identity:77.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:4.8e-22 score:77.8 best_domain_score:77.8 name:BPD_transp_1;
sprot_desc Phosphate transport system permease protein PstA 1;
sprot_id sp|P9WG10|PSTA1_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WG10|PSTA1_MYCTO 9 303 evalue:7.1e-42 qcov:95.50 identity:35.60;
tigrfam_acc TIGR00974;
tigrfam_desc phosphate ABC transporter, permease protein PstA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3a0107s02c;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00974 evalue:3.5e-70 score:235.4 best_domain_score:235.2 name:TIGR00974;
tm_num 5;
21508 20579 transmembrane_helix
ID metaerg.pl|11948
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
topology i20699-20767o20867-20935i20972-21040o21053-21121i21422-21490o;
22500 21505 CDS
ID metaerg.pl|11949
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0005315; GO:0006817;
allko_ids K02037; K02038;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664199.1 1 331 evalue:3.5e-141 qcov:100.00 identity:79.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.2e-18 score:66.7 best_domain_score:66.7 name:BPD_transp_1;
sprot_desc Phosphate transport system permease protein PstC;
sprot_id sp|P0AGH9|PSTC_ECO57;
sprot_target db:uniprot_sprot|sp|P0AGH9|PSTC_ECO57 20 326 evalue:8.6e-54 qcov:92.70 identity:42.40;
tigrfam_acc TIGR02138;
tigrfam_desc phosphate ABC transporter, permease protein PstC;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name phosphate_pstC;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02138 evalue:2.1e-78 score:262.5 best_domain_score:262.3 name:TIGR02138;
tm_num 6;
22500 21505 transmembrane_helix
ID metaerg.pl|11950
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
topology i21574-21642o21775-21843i21880-21948o22006-22074i22189-22257o22378-22446i;
23797 22604 CDS
ID metaerg.pl|11951
allgo_ids GO:0043190; GO:0042597; GO:0042301; GO:0035435;
allko_ids K02040;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664200.1 1 397 evalue:6.4e-166 qcov:100.00 identity:74.40;
kegg_pathway_id 02020; 02010;
kegg_pathway_name Two-component system - General; ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF12727; PF12849; PF01547;
pfam_desc PBP superfamily domain; PBP superfamily domain; Bacterial extracellular solute-binding protein;
pfam_id PBP_like; PBP_like_2; SBP_bac_1;
pfam_target db:Pfam-A.hmm|PF12727.7 evalue:2.8e-08 score:32.4 best_domain_score:29.9 name:PBP_like; db:Pfam-A.hmm|PF12849.7 evalue:6.7e-47 score:159.7 best_domain_score:159.5 name:PBP_like_2; db:Pfam-A.hmm|PF01547.25 evalue:6.8e-10 score:38.6 best_domain_score:34.8 name:SBP_bac_1;
sp YES;
sprot_desc Phosphate-binding protein PstS;
sprot_id sp|Q87C91|PSTS_XYLFT;
sprot_target db:uniprot_sprot|sp|Q87C91|PSTS_XYLFT 68 386 evalue:7.7e-57 qcov:80.40 identity:38.80;
tigrfam_acc TIGR00975;
tigrfam_desc phosphate ABC transporter, phosphate-binding protein PstS;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 3a0107s03;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00975 evalue:2.7e-86 score:288.6 best_domain_score:288.4 name:TIGR00975;
22604 22663 lipoprotein_signal_peptide
ID metaerg.pl|11952
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
24301 24226 tRNA
ID metaerg.pl|11953
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
name tRNA_Glu_ctc;
24460 24388 tRNA
ID metaerg.pl|11954
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
name tRNA_Gln_ctg;
26263 24671 CDS
ID metaerg.pl|11955
allec_ids 6.1.1.17;
allgo_ids GO:0004812; GO:0005524; GO:0043039; GO:0005737; GO:0004818; GO:0000049; GO:0008270; GO:0006424;
allko_ids K01885;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441482.1 3 522 evalue:2.1e-212 qcov:98.10 identity:73.70;
kegg_pathway_id 00251; 00860; 00970;
kegg_pathway_name Glutamate metabolism; Porphyrin and chlorophyll metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id TRNA-CHARGING-PWY; PWY-5188; PWY-5918;
metacyc_pathway_name tRNA charging;; tetrapyrrole biosynthesis I (from glutamate);; superpathay of heme b biosynthesis from glutamate;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;; Tetrapyrrole-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF00749;
pfam_desc tRNA synthetases class I (E and Q), catalytic domain;
pfam_id tRNA-synt_1c;
pfam_target db:Pfam-A.hmm|PF00749.21 evalue:2.9e-72 score:242.5 best_domain_score:183.3 name:tRNA-synt_1c;
sprot_desc Glutamate--tRNA ligase;
sprot_id sp|Q2RJE3|SYE_MOOTA;
sprot_target db:uniprot_sprot|sp|Q2RJE3|SYE_MOOTA 8 524 evalue:1.0e-96 qcov:97.50 identity:40.70;
tigrfam_acc TIGR00464;
tigrfam_desc glutamate--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name gltX_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00464 evalue:7.9e-115 score:383.6 best_domain_score:207.6 name:TIGR00464;
27808 26387 CDS
ID metaerg.pl|11956
allec_ids 4.3.2.2;
allgo_ids GO:0070626; GO:0004018; GO:0044208; GO:0006189;
allko_ids K01679; K01756; K01857;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666375.1 4 473 evalue:3.8e-197 qcov:99.40 identity:77.10;
kegg_pathway_id 00252; 00720; 00362; 00020; 00230;
kegg_pathway_name Alanine and aspartate metabolism; Reductive carboxylate cycle (CO2 fixation); Benzoate degradation via hydroxylation; Citrate cycle (TCA cycle); Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id DENOVOPURINE2-PWY; P121-PWY; PWY-6124; PWY-6126; PRPP-PWY; PWY-841; PWY-6123;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; adenine and adenosine salvage I;; inosine-5'-phosphate biosynthesis II;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; inosine-5'-phosphate biosynthesis I;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Adenine-Adenosine-Salvage;; IMP-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; IMP-Biosynthesis;;
pfam_acc PF10397; PF00206;
pfam_desc Adenylosuccinate lyase C-terminus; Lyase;
pfam_id ADSL_C; Lyase_1;
pfam_target db:Pfam-A.hmm|PF10397.9 evalue:1.3e-12 score:47.3 best_domain_score:47.3 name:ADSL_C; db:Pfam-A.hmm|PF00206.20 evalue:2.7e-23 score:82.1 best_domain_score:80.0 name:Lyase_1;
sprot_desc Adenylosuccinate lyase;
sprot_id sp|Q58339|PUR8_METJA;
sprot_target db:uniprot_sprot|sp|Q58339|PUR8_METJA 11 403 evalue:1.2e-27 qcov:83.10 identity:27.40;
tigrfam_acc TIGR00928;
tigrfam_desc adenylosuccinate lyase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purB;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00928 evalue:1.2e-116 score:389.2 best_domain_score:389.0 name:TIGR00928;
28111 29214 CDS
ID metaerg.pl|11957
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea ferrariae;
genomedb_acc GCF_000603945.1;
genomedb_target db:genomedb|GCF_000603945.1|WP_081802527.1 1 359 evalue:2.3e-69 qcov:97.80 identity:43.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF00563;
pfam_desc EAL domain;
pfam_id EAL;
pfam_target db:Pfam-A.hmm|PF00563.20 evalue:4.5e-47 score:159.8 best_domain_score:159.4 name:EAL;
29369 29905 CDS
ID metaerg.pl|11958
allgo_ids GO:0016021; GO:0005886; GO:0046906; GO:0033013;
allko_ids K05770;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Cryptosporangiaceae;g__Cryptosporangium;s__Cryptosporangium arvum;
genomedb_acc GCF_000585375.1;
genomedb_target db:genomedb|GCF_000585375.1|WP_051570780.1 29 178 evalue:4.3e-29 qcov:84.30 identity:51.30;
kegg_pathway_id 04080;
kegg_pathway_name Neuroactive ligand-receptor interaction;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF03073;
pfam_desc TspO/MBR family;
pfam_id TspO_MBR;
pfam_target db:Pfam-A.hmm|PF03073.15 evalue:3e-38 score:130.2 best_domain_score:129.9 name:TspO_MBR;
sprot_desc Tryptophan-rich protein TspO;
sprot_id sp|O28797|TSPO_ARCFU;
sprot_target db:uniprot_sprot|sp|O28797|TSPO_ARCFU 29 178 evalue:3.8e-16 qcov:84.30 identity:36.70;
tm_num 5;
29369 29905 transmembrane_helix
ID metaerg.pl|11959
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
topology i29444-29512o29555-29623i29660-29728o29741-29809i29828-29896o;
30756 29959 CDS
ID metaerg.pl|11960
allgo_ids GO:0003824; GO:0046872;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666373.1 1 256 evalue:1.2e-83 qcov:96.60 identity:65.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF10370; PF01557;
pfam_desc Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family;
pfam_id DUF2437; FAA_hydrolase;
pfam_target db:Pfam-A.hmm|PF10370.9 evalue:3.6e-19 score:68.6 best_domain_score:66.5 name:DUF2437; db:Pfam-A.hmm|PF01557.18 evalue:7.3e-43 score:146.0 best_domain_score:145.7 name:FAA_hydrolase;
sprot_desc hypothetical protein;
sprot_id sp|O28058|Y2225_ARCFU;
sprot_target db:uniprot_sprot|sp|O28058|Y2225_ARCFU 38 259 evalue:2.6e-32 qcov:83.80 identity:39.70;
32451 30784 CDS
ID metaerg.pl|11961
allec_ids 2.3.1.182;
allgo_ids GO:0003824; GO:0043714; GO:0003852; GO:0009097; GO:0009098;
allko_ids K01571; K01649; K01960; K01666;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669621.1 20 549 evalue:2.3e-254 qcov:95.50 identity:82.30;
kegg_pathway_id 00360; 00643; 00252; 00620; 00330; 00621; 00362; 00020; 00622; 00290;
kegg_pathway_name Phenylalanine metabolism; Styrene degradation; Alanine and aspartate metabolism; Pyruvate metabolism; Arginine and proline metabolism; Biphenyl degradation; Benzoate degradation via hydroxylation; Citrate cycle (TCA cycle); Toluene and xylene degradation; Valine, leucine and isoleucine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-5101;
metacyc_pathway_name L-isoleucine biosynthesis II;;
metacyc_pathway_type ISOLEUCINE-SYN;;
pfam_acc PF00682; PF08502;
pfam_desc HMGL-like; LeuA allosteric (dimerisation) domain;
pfam_id HMGL-like; LeuA_dimer;
pfam_target db:Pfam-A.hmm|PF00682.19 evalue:1.4e-42 score:145.3 best_domain_score:144.4 name:HMGL-like; db:Pfam-A.hmm|PF08502.10 evalue:3.8e-20 score:71.4 best_domain_score:69.7 name:LeuA_dimer;
sprot_desc (R)-citramalate synthase;
sprot_id sp|O86511|CIMA_STRCO;
sprot_target db:uniprot_sprot|sp|O86511|CIMA_STRCO 22 550 evalue:1.2e-140 qcov:95.30 identity:50.20;
tigrfam_acc TIGR00977;
tigrfam_desc citramalate synthase;
tigrfam_mainrole Unknown function;
tigrfam_name citramal_synth;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00977 evalue:1.6e-175 score:583.5 best_domain_score:583.2 name:TIGR00977;
33011 32802 CDS
ID metaerg.pl|11962
allgo_ids GO:0000166;
allko_ids K09165;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666372.1 1 69 evalue:3.1e-23 qcov:100.00 identity:76.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF07311;
pfam_desc Dodecin;
pfam_id Dodecin;
pfam_target db:Pfam-A.hmm|PF07311.12 evalue:6.5e-28 score:96.0 best_domain_score:95.9 name:Dodecin;
sprot_desc Dodecin;
sprot_id sp|Q5SIE3|DODEC_THET8;
sprot_target db:uniprot_sprot|sp|Q5SIE3|DODEC_THET8 1 68 evalue:3.3e-16 qcov:98.60 identity:57.40;
34307 33078 CDS
ID metaerg.pl|11963
allec_ids 2.3.1.-;
allgo_ids GO:0034069; GO:0030649;
allko_ids K01207;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666371.1 14 409 evalue:3.0e-94 qcov:96.80 identity:50.90;
kegg_pathway_id 00530; 01032;
kegg_pathway_name Aminosugars metabolism; Glycan structures - degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-5981; PWY-5437; PWY-5477; PWY-6113; PWYG-321; FASYN-INITIAL-PWY; PWY-6413; PWY1A0-6325; PWY-6432; LPSSYN-PWY; KDO-NAGLIPASYN-PWY; PWY-5184; BENZCOA-PWY; PWY-4801; PWY-6418; PWY-6312; PWY-6442; PWY-6397; PWY1-3; PWY-5080; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-6310; PWY-5139; PWY-84; THREOCAT-PWY; PWY-6438; P3-PWY; PWY-6515; PWY-6295; ECASYN-PWY; PWY-5284; PWY-6404; CENTBENZCOA-PWY; PWY-6316; PWY-5313; PWY-5140; PWY-5268; PWY-6411; PWY-5987; PWY0-881; PWY-5965; PWY-5209; PWY-5400; PWY-6318; PWY-5307; PWY-5972; PWY-5405; PWY-6412; KDO-LIPASYN-PWY; PWY-5393;
metacyc_pathway_name CDP-diacylglycerol biosynthesis III;; L-threonine degradation I;; gallotannin biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; ginsenoside degradation III;; actinorhodin biosynthesis;; curcuminoid biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; superpathway of (Kdo)2-lipid A biosynthesis;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; aloesone biosynthesis I;; 4-hydroxycoumarin and dicoumarol biosynthesis;; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; very long chain fatty acid biosynthesis I;; sophorolipid biosynthesis;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; resveratrol biosynthesis;; superpathway of L-threonine metabolism;; phenylphenalenone biosynthesis;; gallate degradation III (anaerobic);; phloridzin biosynthesis;; ; enterobacterial common antigen biosynthesis;; shisonin biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; cannabinoid biosynthesis;; salvianin biosynthesis;; ginsenoside degradation I;; sorgoleone biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; amaranthin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; gentiodelphin biosynthesis;; stearate biosynthesis I (animals and fungi);; superpathway of betalain biosynthesis;; ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; raspberry ketone biosynthesis;;
metacyc_pathway_type CDP-diacylglycerol-Biosynthesis;; THREONINE-DEG;; GALLOTANNINS;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOID-DEG;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; POLYKETIDE-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; Cell-Wall-Biosynthesis;; Storage-Compounds-Biosynthesis;; Fatty-acid-biosynthesis;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; Super-Pathways; THREONINE-DEG;; POLYKETIDE-SYN;; GALLATE-DEG;; FLAVONOID-SYN;; ; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; Cell-Wall-Biosynthesis; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; TERPENOPHENOLICS-SYN;; ANTHOCYANIN-SYN;; Ginsenoside-Degradation;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; METHANOGENESIS;; BETALAIN-ALKALOIDS;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; Stearate-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; Ginsenoside-Degradation;; Lipid-Biosynthesis;; POLYKETIDE-SYN;;
pfam_acc PF00583; PF17668; PF13527; PF13530;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Sterol carrier protein domain;
pfam_id Acetyltransf_1; Acetyltransf_17; Acetyltransf_9; SCP2_2;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.1e-07 score:31.3 best_domain_score:30.1 name:Acetyltransf_1; db:Pfam-A.hmm|PF17668.1 evalue:3.7e-17 score:62.4 best_domain_score:60.6 name:Acetyltransf_17; db:Pfam-A.hmm|PF13527.7 evalue:9.8e-25 score:86.3 best_domain_score:85.7 name:Acetyltransf_9; db:Pfam-A.hmm|PF13530.6 evalue:1.1e-14 score:53.9 best_domain_score:52.9 name:SCP2_2;
sprot_desc Uncharacterized N-acetyltransferase SCO2625;
sprot_id sp|Q9F309|Y2625_STRCO;
sprot_target db:uniprot_sprot|sp|Q9F309|Y2625_STRCO 57 409 evalue:9.7e-47 qcov:86.30 identity:37.40;
35536 34307 CDS
ID metaerg.pl|11964
allec_ids 2.3.1.-;
allgo_ids GO:0034069; GO:0030649;
allko_ids K01207;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666369.1 5 409 evalue:3.3e-117 qcov:99.00 identity:56.30;
kegg_pathway_id 00530; 01032;
kegg_pathway_name Aminosugars metabolism; Glycan structures - degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-5184; BENZCOA-PWY; PWY-4801; KDO-NAGLIPASYN-PWY; PWY1-3; PWY-6397; PWY-6418; PWY-6312; PWY-6442; PWY-5080; PWY-5139; PWY-6310; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-5477; PWY-5437; PWY-5981; PWY-6413; FASYN-INITIAL-PWY; PWYG-321; PWY-6113; LPSSYN-PWY; PWY-6432; PWY1A0-6325; PWY-5965; PWY-5209; PWY-5400; PWY-5405; PWY-5972; PWY-5307; PWY-6318; KDO-LIPASYN-PWY; PWY-6412; PWY-5393; PWY-6438; THREOCAT-PWY; PWY-84; PWY-5284; ECASYN-PWY; P3-PWY; PWY-6295; PWY-6515; PWY-5313; PWY-6316; CENTBENZCOA-PWY; PWY-6404; PWY-5987; PWY-6411; PWY-5268; PWY0-881; PWY-5140;
metacyc_pathway_name toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; aloesone biosynthesis I;; superpathway of (Kdo)2-lipid A biosynthesis;; polyhydroxybutanoate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; very long chain fatty acid biosynthesis I;; pelargonidin conjugates biosynthesis;; aloesone biosynthesis II;; sophorolipid biosynthesis;; gallotannin biosynthesis;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; ginsenoside degradation III;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; curcuminoid biosynthesis;; actinorhodin biosynthesis;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; amaranthin biosynthesis;; superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; gentiodelphin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; (Kdo)2-lipid A biosynthesis I;; ginsenoside degradation II;; raspberry ketone biosynthesis;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; resveratrol biosynthesis;; shisonin biosynthesis;; enterobacterial common antigen biosynthesis;; gallate degradation III (anaerobic);; ; phloridzin biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; aromatic polyketides biosynthesis;; benzoyl-CoA degradation II (anaerobic);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; sorgoleone biosynthesis;; ginsenoside degradation I;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; cannabinoid biosynthesis;;
metacyc_pathway_type Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; POLYKETIDE-SYN;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Storage-Compounds-Biosynthesis;; Cell-Wall-Biosynthesis;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; Fatty-acid-biosynthesis;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Lipid-Biosynthesis;; GALLOTANNINS;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; TERPENOID-DEG;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; Fatty-acid-biosynthesis;; METHANOGENESIS;; BETALAIN-ALKALOIDS;; BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; ANTHOCYANIN-SYN;; PHENYLALANINE-DEG;; Lipid-Biosynthesis;; Ginsenoside-Degradation;; POLYKETIDE-SYN;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; ANTHOCYANIN-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; GALLATE-DEG;; ; FLAVONOID-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; POLYKETIDE-SYN;; Benzoyl-CoA-Degradation;; Cell-Wall-Biosynthesis; Super-Pathways;; QUINONE-SYN;; Ginsenoside-Degradation;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;;
pfam_acc PF00583; PF17668; PF13527; PF13530;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; Sterol carrier protein domain;
pfam_id Acetyltransf_1; Acetyltransf_17; Acetyltransf_9; SCP2_2;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:2.3e-05 score:23.9 best_domain_score:22.5 name:Acetyltransf_1; db:Pfam-A.hmm|PF17668.1 evalue:7.2e-21 score:74.4 best_domain_score:73.3 name:Acetyltransf_17; db:Pfam-A.hmm|PF13527.7 evalue:5e-28 score:97.0 best_domain_score:96.5 name:Acetyltransf_9; db:Pfam-A.hmm|PF13530.6 evalue:1.6e-19 score:69.5 best_domain_score:68.5 name:SCP2_2;
sprot_desc Uncharacterized N-acetyltransferase SCO2625;
sprot_id sp|Q9F309|Y2625_STRCO;
sprot_target db:uniprot_sprot|sp|Q9F309|Y2625_STRCO 30 406 evalue:3.0e-64 qcov:92.20 identity:41.60;
36513 35533 CDS
ID metaerg.pl|11965
allec_ids 3.1.1.-;
allgo_ids GO:0016787; GO:0017000;
allko_ids K01432; K01046; K01181;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666370.1 13 322 evalue:5.6e-99 qcov:95.10 identity:61.30;
kegg_pathway_id 00380; 00630; 00561;
kegg_pathway_name Tryptophan metabolism; Glyoxylate and dicarboxylate metabolism; Glycerolipid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id BIOTIN-BIOSYNTHESIS-PWY; LIPAS-PWY; PWY-6558; PWY-6519; PWY0-1300;
metacyc_pathway_name biotin biosynthesis I;; triacylglycerol degradation;; heparan sulfate biosynthesis (late stages);; 8-amino-7-oxononanoate biosynthesis I;; 2-O-α-mannosyl-D-glycerate degradation;;
metacyc_pathway_type BIOTIN-SYN; Super-Pathways;; Fatty-Acid-and-Lipid-Degradation;; Glycosaminoglycans-Biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;; Sugars-And-Polysaccharides-Degradation;;
pfam_acc PF07859; PF10340;
pfam_desc alpha/beta hydrolase fold; Steryl acetyl hydrolase;
pfam_id Abhydrolase_3; Say1_Mug180;
pfam_target db:Pfam-A.hmm|PF07859.13 evalue:5.9e-52 score:175.8 best_domain_score:175.5 name:Abhydrolase_3; db:Pfam-A.hmm|PF10340.9 evalue:6.7e-11 score:40.9 best_domain_score:40.4 name:Say1_Mug180;
sprot_desc Acetyl-hydrolase;
sprot_id sp|Q01109|BAH_STRHY;
sprot_target db:uniprot_sprot|sp|Q01109|BAH_STRHY 71 313 evalue:4.8e-41 qcov:74.50 identity:42.20;
37507 36578 CDS
ID metaerg.pl|11966
allec_ids 2.6.1.42;
allgo_ids GO:0003824; GO:0052656; GO:0052654; GO:0052655; GO:0009097; GO:0009098; GO:0009099;
allko_ids K00826;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669620.1 11 304 evalue:8.9e-131 qcov:95.10 identity:78.90;
kegg_pathway_id 00770; 00290; 00280;
kegg_pathway_name Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-5078; PWY-5076; VALSYN-PWY; LEUSYN-PWY; PWY0-1061; PWY-5057; BRANCHED-CHAIN-AA-SYN-PWY; LEU-DEG2-PWY; VALDEG-PWY; PWY-5101; ALANINE-VALINESYN-PWY; PWY-5108; PWY-3001; THREOCAT-PWY; PWY-5103; PWY-5104; ILEUSYN-PWY; ILEUDEG-PWY;
metacyc_pathway_name L-isoleucine degradation II;; L-leucine degradation III;; L-valine biosynthesis;; L-leucine biosynthesis;; superpathway of L-alanine biosynthesis;; L-valine degradation II;; superpathway of branched chain amino acid biosynthesis;; L-leucine degradation I;; L-valine degradation I;; L-isoleucine biosynthesis II;; L-alanine biosynthesis I;; L-isoleucine biosynthesis V;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-threonine metabolism;; L-isoleucine biosynthesis III;; L-isoleucine biosynthesis IV;; L-isoleucine biosynthesis I (from threonine);; L-isoleucine degradation I;;
metacyc_pathway_type ISOLEUCINE-DEG;; LEUCINE-DEG;; VALINE-BIOSYNTHESIS;; LEUCINE-SYN;; ALANINE-SYN; Super-Pathways;; VALINE-DEG;; Amino-Acid-Biosynthesis; Super-Pathways;; LEUCINE-DEG;; VALINE-DEG;; ISOLEUCINE-SYN;; ALANINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-DEG;;
pfam_acc PF01063;
pfam_desc Amino-transferase class IV;
pfam_id Aminotran_4;
pfam_target db:Pfam-A.hmm|PF01063.19 evalue:5.7e-41 score:140.0 best_domain_score:139.8 name:Aminotran_4;
sprot_desc Putative branched-chain-amino-acid aminotransferase;
sprot_id sp|O27481|ILVE_METTH;
sprot_target db:uniprot_sprot|sp|O27481|ILVE_METTH 8 304 evalue:3.2e-79 qcov:96.10 identity:49.50;
tigrfam_acc TIGR01122;
tigrfam_desc branched-chain amino acid aminotransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ilvE_I;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01122 evalue:1.4e-112 score:374.9 best_domain_score:374.7 name:TIGR01122;
38621 37554 CDS
ID metaerg.pl|11967
allec_ids 1.1.1.85;
allgo_ids GO:0016616; GO:0055114; GO:0005737; GO:0003862; GO:0000287; GO:0051287; GO:0009098;
allko_ids K10978; K00052;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666368.1 5 352 evalue:6.0e-163 qcov:98.00 identity:83.30;
kegg_pathway_id 00290;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id LEUSYN-PWY; BRANCHED-CHAIN-AA-SYN-PWY;
metacyc_pathway_name L-leucine biosynthesis;; superpathway of branched chain amino acid biosynthesis;;
metacyc_pathway_type LEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00180;
pfam_desc Isocitrate/isopropylmalate dehydrogenase;
pfam_id Iso_dh;
pfam_target db:Pfam-A.hmm|PF00180.20 evalue:5.5e-81 score:271.6 best_domain_score:271.4 name:Iso_dh;
sprot_desc 3-isopropylmalate dehydrogenase;
sprot_id sp|Q47SB4|LEU3_THEFY;
sprot_target db:uniprot_sprot|sp|Q47SB4|LEU3_THEFY 6 353 evalue:1.1e-112 qcov:98.00 identity:61.30;
38880 39533 CDS
ID metaerg.pl|11968
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Arthrobacter_H;s__Arthrobacter_H rhombi;
genomedb_acc GCF_900163545.1;
genomedb_target db:genomedb|GCF_900163545.1|WP_086995411.1 56 217 evalue:3.8e-43 qcov:74.70 identity:58.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF06271;
pfam_desc RDD family;
pfam_id RDD;
pfam_target db:Pfam-A.hmm|PF06271.12 evalue:1.2e-20 score:73.4 best_domain_score:73.0 name:RDD;
tm_num 3;
38880 39533 transmembrane_helix
ID metaerg.pl|11969
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
topology i39090-39158o39186-39254i39354-39422o;
39621 40022 CDS
ID metaerg.pl|11970
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666365.1 9 131 evalue:2.8e-33 qcov:92.50 identity:61.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
40634 40041 CDS
ID metaerg.pl|11971
allec_ids 3.1.3.102;
allgo_ids GO:0009507; GO:0009570; GO:0090711; GO:0043621; GO:0009231;
allko_ids K20860;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666364.1 2 197 evalue:2.0e-67 qcov:99.50 identity:65.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF13419; PF13242;
pfam_desc Haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD_2; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:2e-10 score:40.3 best_domain_score:39.7 name:HAD_2; db:Pfam-A.hmm|PF13242.6 evalue:1.5e-05 score:24.2 best_domain_score:23.3 name:Hydrolase_like;
sprot_desc Flavin mononucleotide hydrolase 1, chloroplatic;
sprot_id sp|Q84VZ1|FHY1C_ARATH;
sprot_target db:uniprot_sprot|sp|Q84VZ1|FHY1C_ARATH 7 194 evalue:1.2e-23 qcov:95.40 identity:32.60;
tigrfam_acc TIGR01509; TIGR01549;
tigrfam_desc HAD hydrolase, family IA, variant 3; HAD hydrolase, family IA, variant 1;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name HAD-SF-IA-v3; HAD-SF-IA-v1;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:4e-11 score:42.5 best_domain_score:41.2 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01549 evalue:4.7e-08 score:32.7 best_domain_score:28.6 name:TIGR01549;
40870 40631 CDS
ID metaerg.pl|11972
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666363.1 13 74 evalue:3.1e-11 qcov:78.50 identity:58.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
41347 40937 CDS
ID metaerg.pl|11973
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
sp YES;
40937 40972 lipoprotein_signal_peptide
ID metaerg.pl|11974
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
41500 42669 CDS
ID metaerg.pl|11975
allgo_ids GO:0016787; GO:0005654; GO:0016805; GO:0006508; GO:0032268;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669619.1 7 383 evalue:2.3e-139 qcov:96.90 identity:69.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:3.5e-05 score:22.9 best_domain_score:21.2 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:1.6e-08 score:33.8 best_domain_score:33.1 name:Peptidase_M20;
sprot_desc Peptidase M20 domain-containing protein 2;
sprot_id sp|A3KG59|P20D2_MOUSE;
sprot_target db:uniprot_sprot|sp|A3KG59|P20D2_MOUSE 3 366 evalue:2.6e-57 qcov:93.60 identity:37.40;
tigrfam_acc TIGR01891;
tigrfam_desc amidohydrolase;
tigrfam_mainrole Protein fate;
tigrfam_name amidohydrolases;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01891 evalue:1.2e-57 score:194.9 best_domain_score:193.9 name:TIGR01891;
42666 44042 CDS
ID metaerg.pl|11976
allec_ids 5.1.1.23;
allgo_ids GO:0016853; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K23170;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666361.1 3 440 evalue:3.9e-114 qcov:95.60 identity:55.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
sprot_desc UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-L-glutamate epimerase;
sprot_id sp|A4X982|MURL_SALTO;
sprot_target db:uniprot_sprot|sp|A4X982|MURL_SALTO 42 453 evalue:4.8e-63 qcov:90.00 identity:39.70;
44039 45340 CDS
ID metaerg.pl|11977
allec_ids 6.3.2.53; 6.3.2.9;
allgo_ids GO:0005524; GO:0009058; GO:0016874; GO:0005737; GO:0008764; GO:0007049; GO:0051301; GO:0071555; GO:0009252; GO:0008360;
allko_ids K01928; K01925;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441479.1 3 432 evalue:5.8e-112 qcov:99.30 identity:57.80;
kegg_pathway_id 00471; 00300; 00550;
kegg_pathway_name D-Glutamine and D-glutamate metabolism; Lysine biosynthesis; Peptidoglycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-6387; PWY-6385; PWY-5265; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-6386; PWY-6470;
metacyc_pathway_name UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis III (mycobacteria);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing);; peptidoglycan biosynthesis V (β-lactam resistance);;
metacyc_pathway_type Acetylmuramoyl-Pentapeptide-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Acetylmuramoyl-Pentapeptide-Biosynthesis;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF02875; PF08245;
pfam_desc Mur ligase family, glutamate ligase domain; Mur ligase middle domain;
pfam_id Mur_ligase_C; Mur_ligase_M;
pfam_target db:Pfam-A.hmm|PF02875.21 evalue:1.1e-05 score:24.9 best_domain_score:22.7 name:Mur_ligase_C; db:Pfam-A.hmm|PF08245.12 evalue:2.8e-13 score:49.5 best_domain_score:49.1 name:Mur_ligase_M;
sprot_desc UDP-N-acetylmuramoyl-L-alanine--L-glutamate ligase;
sprot_id sp|C4RJF7|MURD2_MICS3;
sprot_target db:uniprot_sprot|sp|C4RJF7|MURD2_MICS3 2 430 evalue:3.2e-48 qcov:99.10 identity:36.00;
tigrfam_acc TIGR01087;
tigrfam_desc UDP-N-acetylmuramoylalanine--D-glutamate ligase;
tigrfam_mainrole Cell envelope;
tigrfam_name murD;
tigrfam_sub1role Biosynthesis and degradation of murein sacculus and peptidoglycan;
tigrfam_target db:TIGRFAMs.hmm|TIGR01087 evalue:8e-74 score:248.4 best_domain_score:246.2 name:TIGR01087;
45388 46533 CDS
ID metaerg.pl|11978
allgo_ids GO:0003824;
allko_ids K01113; K01513;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666356.1 4 380 evalue:1.1e-98 qcov:99.00 identity:52.80;
kegg_pathway_id 00760; 00230; 00740; 00770; 00500;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Purine metabolism; Riboflavin metabolism; Pantothenate and CoA biosynthesis; Starch and sucrose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF01663;
pfam_desc Type I phosphodiesterase / nucleotide pyrophosphatase;
pfam_id Phosphodiest;
pfam_target db:Pfam-A.hmm|PF01663.22 evalue:7.1e-32 score:110.6 best_domain_score:105.7 name:Phosphodiest;
46543 47124 CDS
ID metaerg.pl|11979
allgo_ids GO:0002161;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666355.1 29 193 evalue:6.5e-63 qcov:85.50 identity:77.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF04073;
pfam_desc Aminoacyl-tRNA editing domain;
pfam_id tRNA_edit;
pfam_target db:Pfam-A.hmm|PF04073.15 evalue:1e-19 score:70.0 best_domain_score:69.6 name:tRNA_edit;
47893 47138 CDS
ID metaerg.pl|11980
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666320.1 11 249 evalue:4.2e-62 qcov:95.20 identity:54.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF01927; PF14451;
pfam_desc Mut7-C RNAse domain; Mut7-C ubiquitin;
pfam_id Mut7-C; Ub-Mut7C;
pfam_target db:Pfam-A.hmm|PF01927.16 evalue:1.1e-40 score:138.4 best_domain_score:138.1 name:Mut7-C; db:Pfam-A.hmm|PF14451.6 evalue:1.6e-14 score:52.7 best_domain_score:51.8 name:Ub-Mut7C;
47992 48450 CDS
ID metaerg.pl|11981
allgo_ids GO:0016209; GO:0016491; GO:0055114;
allko_ids K11186; K11185; K03386; K03564; K11188; K13279; K11065; K00430;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666946.1 6 150 evalue:1.8e-52 qcov:95.40 identity:72.40;
kegg_pathway_id 00480; 00360; 00680; 00940;
kegg_pathway_name Glutathione metabolism; Phenylalanine metabolism; Methane metabolism; Phenylpropanoid biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:1.4e-28 score:98.5 best_domain_score:98.3 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:1.5e-20 score:72.7 best_domain_score:72.5 name:Redoxin;
48504 49166 CDS
ID metaerg.pl|11982
genomedb_OC d__Bacteria;p__Firmicutes_E;c__Thermaerobacteria;o__Thermaerobacterales;f__Thermaerobacteraceae;g__Thermaerobacter;s__Thermaerobacter sp003242195;
genomedb_acc GCA_003242195.1;
genomedb_target db:genomedb|GCA_003242195.1|PZN11358.1 14 216 evalue:6.0e-73 qcov:92.30 identity:69.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF03070;
pfam_desc TENA/THI-4/PQQC family;
pfam_id TENA_THI-4;
pfam_target db:Pfam-A.hmm|PF03070.16 evalue:1.4e-31 score:109.2 best_domain_score:108.9 name:TENA_THI-4;
49826 49197 CDS
ID metaerg.pl|11983
allec_ids 4.2.1.33;
allgo_ids GO:0009316; GO:0003861; GO:0009098;
allko_ids K01702; K01703; K01704;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666349.1 1 208 evalue:2.6e-81 qcov:99.50 identity:68.30;
kegg_pathway_id 00290;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id BRANCHED-CHAIN-AA-SYN-PWY; LEUSYN-PWY;
metacyc_pathway_name superpathway of branched chain amino acid biosynthesis;; L-leucine biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; LEUCINE-SYN;;
pfam_acc PF00694;
pfam_desc Aconitase C-terminal domain;
pfam_id Aconitase_C;
pfam_target db:Pfam-A.hmm|PF00694.19 evalue:9.6e-27 score:93.1 best_domain_score:92.8 name:Aconitase_C;
sprot_desc 3-isopropylmalate dehydratase small subunit;
sprot_id sp|Q67MJ3|LEUD_SYMTH;
sprot_target db:uniprot_sprot|sp|Q67MJ3|LEUD_SYMTH 1 208 evalue:3.8e-55 qcov:99.50 identity:53.80;
tigrfam_acc TIGR00171;
tigrfam_desc 3-isopropylmalate dehydratase, small subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name leuD;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00171 evalue:1.7e-61 score:206.5 best_domain_score:206.3 name:TIGR00171;
51268 49826 CDS
ID metaerg.pl|11984
allec_ids 4.2.1.33;
allgo_ids GO:0003861; GO:0051539; GO:0046872; GO:0009098;
allko_ids K01682; K01703; K01681; K01702; K01705; K01704;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666348.1 4 473 evalue:2.2e-216 qcov:97.90 identity:78.90;
kegg_pathway_id 00630; 00020; 00300; 00290; 00720;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Citrate cycle (TCA cycle); Lysine biosynthesis; Valine, leucine and isoleucine biosynthesis; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id LEUSYN-PWY; BRANCHED-CHAIN-AA-SYN-PWY;
metacyc_pathway_name L-leucine biosynthesis;; superpathway of branched chain amino acid biosynthesis;;
metacyc_pathway_type LEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00330;
pfam_desc Aconitase family (aconitate hydratase);
pfam_id Aconitase;
pfam_target db:Pfam-A.hmm|PF00330.20 evalue:1.6e-155 score:517.9 best_domain_score:517.7 name:Aconitase;
sprot_desc 3-isopropylmalate dehydratase large subunit;
sprot_id sp|Q67MJ2|LEUC_SYMTH;
sprot_target db:uniprot_sprot|sp|Q67MJ2|LEUC_SYMTH 1 473 evalue:3.8e-175 qcov:98.50 identity:66.40;
tigrfam_acc TIGR00170;
tigrfam_desc 3-isopropylmalate dehydratase, large subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name leuC;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00170 evalue:5.6e-228 score:756.3 best_domain_score:756.0 name:TIGR00170;
51543 51358 CDS
ID metaerg.pl|11985
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666347.1 3 60 evalue:1.0e-14 qcov:95.10 identity:74.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
53310 51616 CDS
ID metaerg.pl|11986
allec_ids 2.3.3.13;
allgo_ids GO:0003824; GO:0003852; GO:0009098;
allko_ids K09011; K01649; K01655; K02594; K01666;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666346.1 1 564 evalue:2.0e-253 qcov:100.00 identity:82.80;
kegg_pathway_id 00620; 00910; 00362; 00621; 00643; 00300; 00360; 00290; 00622;
kegg_pathway_name Pyruvate metabolism; Nitrogen metabolism; Benzoate degradation via hydroxylation; Biphenyl degradation; Styrene degradation; Lysine biosynthesis; Phenylalanine metabolism; Valine, leucine and isoleucine biosynthesis; Toluene and xylene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id LEUSYN-PWY; BRANCHED-CHAIN-AA-SYN-PWY;
metacyc_pathway_name L-leucine biosynthesis;; superpathway of branched chain amino acid biosynthesis;;
metacyc_pathway_type LEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00682; PF08502;
pfam_desc HMGL-like; LeuA allosteric (dimerisation) domain;
pfam_id HMGL-like; LeuA_dimer;
pfam_target db:Pfam-A.hmm|PF00682.19 evalue:1.3e-89 score:299.5 best_domain_score:298.9 name:HMGL-like; db:Pfam-A.hmm|PF08502.10 evalue:5.4e-31 score:106.5 best_domain_score:105.1 name:LeuA_dimer;
sprot_desc 2-isopropylmalate synthase;
sprot_id sp|C7M0E4|LEU1_ACIFD;
sprot_target db:uniprot_sprot|sp|C7M0E4|LEU1_ACIFD 22 555 evalue:1.0e-134 qcov:94.70 identity:52.50;
tigrfam_acc TIGR00973;
tigrfam_desc 2-isopropylmalate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name leuA_bact;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00973 evalue:6.5e-191 score:634.2 best_domain_score:633.3 name:TIGR00973;
55033 53687 CDS
ID metaerg.pl|11987
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441362.1 7 416 evalue:1.4e-89 qcov:91.50 identity:50.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF03816;
pfam_desc Cell envelope-related transcriptional attenuator domain;
pfam_id LytR_cpsA_psr;
pfam_target db:Pfam-A.hmm|PF03816.14 evalue:1.6e-34 score:118.5 best_domain_score:118.0 name:LytR_cpsA_psr;
sp YES;
tigrfam_acc TIGR00350;
tigrfam_desc cell envelope-related function transcriptional attenuator common domain;
tigrfam_mainrole Regulatory functions;
tigrfam_name lytR_cpsA_psr;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00350 evalue:7.6e-34 score:116.3 best_domain_score:115.7 name:TIGR00350;
tm_num 1;
53687 53788 signal_peptide
ID metaerg.pl|11988
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
55033 53687 transmembrane_helix
ID metaerg.pl|11989
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
topology i53723-53791o;
55299 56195 CDS
ID metaerg.pl|11990
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666342.1 3 298 evalue:1.0e-83 qcov:99.30 identity:58.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF00583; PF13480;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_6;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.7e-05 score:24.3 best_domain_score:23.6 name:Acetyltransf_1; db:Pfam-A.hmm|PF13480.7 evalue:9.7e-06 score:25.0 best_domain_score:25.0 name:Acetyltransf_6;
56192 57433 CDS
ID metaerg.pl|11991
allec_ids 4.2.1.113;
allgo_ids GO:0016836; GO:0000287; GO:0009234;
allko_ids K01631; K01684; K02549;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces toyocaensis;
genomedb_acc GCF_000725125.1;
genomedb_target db:genomedb|GCF_000725125.1|WP_037937156.1 39 409 evalue:4.7e-111 qcov:89.80 identity:59.20;
kegg_pathway_id 00130; 00052;
kegg_pathway_name Ubiquinone biosynthesis; Galactose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-5840; ALL-CHORISMATE-PWY; PWY-5897; PWY-5837; PWY-5896; PWY-5845; PWY-5862; PWY-5860; PWY-5791; PWY-5861; PWY-5838; PWY-5898; PWY-5863; PWY-5850; PWY-5899;
metacyc_pathway_name superpathway of menaquinol-7 biosynthesis;; superpathway of chorismate metabolism;; superpathway of menaquinol-11 biosynthesis;; 2-carboxy-1,4-naphthoquinol biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-6 biosynthesis I;; ; superpathway of demethylmenaquinol-8 biosynthesis I;; superpathway of menaquinol-8 biosynthesis I;; superpathway of menaquinol-12 biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-13 biosynthesis;;
metacyc_pathway_type Menaquinone-Biosynthesis; Super-Pathways;; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; DHNA-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinol-6-Biosynthesis; Super-Pathways;; ; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;;
pfam_acc PF13378; PF02746;
pfam_desc Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain;
pfam_id MR_MLE_C; MR_MLE_N;
pfam_target db:Pfam-A.hmm|PF13378.6 evalue:1.3e-43 score:148.4 best_domain_score:147.8 name:MR_MLE_C; db:Pfam-A.hmm|PF02746.16 evalue:6.4e-09 score:35.3 best_domain_score:34.2 name:MR_MLE_N;
sprot_desc o-succinylbenzoate synthase;
sprot_id sp|O34514|MENC_BACSU;
sprot_target db:uniprot_sprot|sp|O34514|MENC_BACSU 44 395 evalue:6.3e-62 qcov:85.20 identity:40.10;
tigrfam_acc TIGR01928;
tigrfam_desc o-succinylbenzoate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name menC_lowGC/arch;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR01928 evalue:3.2e-82 score:275.3 best_domain_score:275.0 name:TIGR01928;
57501 58559 CDS
ID metaerg.pl|11992
allec_ids 6.5.1.1;
allgo_ids GO:0003910; GO:0006281; GO:0006310; GO:0005524;
genomedb_OC d__Bacteria;p__Chloroflexota_A;c__Ellin6529;o__CSP1-4;f__CSP1-4;g__Palsa-1032;s__Palsa-1032 sp003169735;
genomedb_acc GCA_003169735.1;
genomedb_target db:genomedb|GCA_003169735.1|PNAP01000031.1_54 2 349 evalue:4.7e-120 qcov:98.90 identity:60.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF04679; PF01068; PF01331;
pfam_desc ATP dependent DNA ligase C terminal region ; ATP dependent DNA ligase domain; mRNA capping enzyme, catalytic domain;
pfam_id DNA_ligase_A_C; DNA_ligase_A_M; mRNA_cap_enzyme;
pfam_target db:Pfam-A.hmm|PF04679.15 evalue:8.2e-14 score:51.3 best_domain_score:50.5 name:DNA_ligase_A_C; db:Pfam-A.hmm|PF01068.21 evalue:9e-35 score:119.4 best_domain_score:119.0 name:DNA_ligase_A_M; db:Pfam-A.hmm|PF01331.19 evalue:9.4e-07 score:28.1 best_domain_score:11.8 name:mRNA_cap_enzyme;
sprot_desc DNA ligase C2;
sprot_id sp|A0R5T3|LIGC2_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R5T3|LIGC2_MYCS2 1 336 evalue:5.5e-99 qcov:95.50 identity:54.80;
59115 58573 CDS
ID metaerg.pl|11993
allgo_ids GO:0005576;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Salegentibacter;s__Salegentibacter sediminis;
genomedb_acc GCF_002078605.1;
genomedb_target db:genomedb|GCF_002078605.1|WP_081212104.1 22 179 evalue:8.0e-31 qcov:87.80 identity:55.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF02469;
pfam_desc Fasciclin domain;
pfam_id Fasciclin;
pfam_target db:Pfam-A.hmm|PF02469.22 evalue:1.1e-18 score:66.9 best_domain_score:66.7 name:Fasciclin;
sp YES;
sprot_desc Immunogenic protein MPB70;
sprot_id sp|P0A669|MP70_MYCBO;
sprot_target db:uniprot_sprot|sp|P0A669|MP70_MYCBO 10 178 evalue:3.3e-07 qcov:93.90 identity:33.90;
tm_num 1;
58573 58644 signal_peptide
ID metaerg.pl|11994
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
59115 58573 transmembrane_helix
ID metaerg.pl|11995
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
topology i58585-58644o;
59368 60468 CDS
ID metaerg.pl|11996
allec_ids 2.5.1.145; 2.4.99.-;
allgo_ids GO:0016020; GO:0016757; GO:0042158; GO:0005887; GO:0008961;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666341.1 4 341 evalue:8.2e-83 qcov:92.30 identity:54.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-6467;
metacyc_pathway_name Kdo transfer to lipid IVA III (Chlamydia);;
metacyc_pathway_type KDO-Lipid-IV-Transfer; Super-Pathways;;
pfam_acc PF01790;
pfam_desc Prolipoprotein diacylglyceryl transferase;
pfam_id LGT;
pfam_target db:Pfam-A.hmm|PF01790.18 evalue:3.8e-62 score:208.9 best_domain_score:208.5 name:LGT;
sprot_desc Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase;
sprot_id sp|Q0RFY2|LGT_FRAAA;
sprot_target db:uniprot_sprot|sp|Q0RFY2|LGT_FRAAA 5 261 evalue:9.9e-51 qcov:70.20 identity:45.00;
tigrfam_acc TIGR00544;
tigrfam_desc prolipoprotein diacylglyceryl transferase;
tigrfam_mainrole Protein fate;
tigrfam_name lgt;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00544 evalue:2.9e-51 score:173.7 best_domain_score:173.4 name:TIGR00544;
tm_num 5;
59368 60468 transmembrane_helix
ID metaerg.pl|11997
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
topology o59410-59478i59536-59604o59647-59715i60004-60060o60103-60156i;
61357 60545 CDS
ID metaerg.pl|11998
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora sp003013775;
genomedb_acc GCF_003013775.1;
genomedb_target db:genomedb|GCF_003013775.1|WP_107075473.1 26 266 evalue:1.2e-54 qcov:89.30 identity:50.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF09844;
pfam_desc Uncharacterized conserved protein (COG2071);
pfam_id DUF2071;
pfam_target db:Pfam-A.hmm|PF09844.9 evalue:6e-58 score:195.2 best_domain_score:195.0 name:DUF2071;
64843 61466 CDS
ID metaerg.pl|11999
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Jiangellales;f__Jiangellaceae;g__Phytoactinopolyspora;s__Phytoactinopolyspora sp003287285;
genomedb_acc GCA_003287285.1;
genomedb_target db:genomedb|GCA_003287285.1|RAW18662.1 88 1091 evalue:0.0e+00 qcov:89.20 identity:68.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
sp YES;
tm_num 1;
61466 61564 signal_peptide
ID metaerg.pl|12000
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
64843 61466 transmembrane_helix
ID metaerg.pl|12001
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
topology i61499-61567o;
65864 65046 CDS
ID metaerg.pl|12002
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
67362 65854 CDS
ID metaerg.pl|12003
allec_ids 1.8.1.4;
allgo_ids GO:0016491; GO:0055114; GO:0005737; GO:0004148; GO:0009055; GO:0050660; GO:0045454; GO:0006096;
allko_ids K00529; K00266; K00382; K03885; K00302; K00356; K00384; K03388; K00383;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666339.1 6 500 evalue:1.3e-179 qcov:98.60 identity:68.10;
kegg_pathway_id 00480; 00280; 00010; 00260; 00020; 00240; 00910; 00252; 00251; 00620; 00790; 00360; 00190; 00071;
kegg_pathway_name Glutathione metabolism; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle); Pyrimidine metabolism; Nitrogen metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Pyruvate metabolism; Folate biosynthesis; Phenylalanine metabolism; Oxidative phosphorylation; Fatty acid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-5173; PWY-5084; GLYCLEAV-PWY; PYRUVDEHYD-PWY; PWY-5046; PWY-5464;
metacyc_pathway_name superpathway of acetyl-CoA biosynthesis;; 2-oxoglutarate decarboxylation to succinyl-CoA;; glycine cleavage;; pyruvate decarboxylation to acetyl CoA;; 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; Super-Pathways;; Respiration;; GLYCINE-DEG;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Respiration;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00890; PF01134; PF03486; PF13450; PF00070; PF07992; PF13738; PF02852;
pfam_desc FAD binding domain; Glucose inhibited division protein A; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id FAD_binding_2; GIDA; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:2.6e-06 score:26.0 best_domain_score:21.9 name:FAD_binding_2; db:Pfam-A.hmm|PF01134.22 evalue:2.9e-09 score:35.7 best_domain_score:27.2 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:9.4e-08 score:30.4 best_domain_score:14.4 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:2e-07 score:30.4 best_domain_score:18.0 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:1e-19 score:70.1 best_domain_score:64.6 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:9.3e-58 score:195.0 best_domain_score:194.6 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:3.1e-10 score:39.0 best_domain_score:26.0 name:Pyr_redox_3; db:Pfam-A.hmm|PF02852.22 evalue:2.1e-22 score:78.7 best_domain_score:43.9 name:Pyr_redox_dim;
sprot_desc Dihydrolipoyl dehydrogenase;
sprot_id sp|P54533|DLDH2_BACSU;
sprot_target db:uniprot_sprot|sp|P54533|DLDH2_BACSU 7 500 evalue:1.2e-75 qcov:98.40 identity:36.00;
tigrfam_acc TIGR01350;
tigrfam_desc dihydrolipoyl dehydrogenase;
tigrfam_name lipoamide_DH;
tigrfam_target db:TIGRFAMs.hmm|TIGR01350 evalue:2.4e-126 score:421.3 best_domain_score:372.6 name:TIGR01350;
68945 67359 CDS
ID metaerg.pl|12004
allec_ids 2.3.1.168;
allgo_ids GO:0016746; GO:0005618; GO:0005737; GO:0005886; GO:0016407; GO:0043754; GO:0031405; GO:0055114;
allko_ids K00658; K11381; K09699; K00382; K00163; K00162; K00627;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666338.1 4 527 evalue:2.4e-144 qcov:99.20 identity:55.00;
kegg_pathway_id 00650; 00252; 00620; 00020; 00260; 00290; 00280; 00310; 00010;
kegg_pathway_name Butanoate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Valine, leucine and isoleucine biosynthesis; Valine, leucine and isoleucine degradation; Lysine degradation; Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-5046;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF00198; PF00364; PF02817;
pfam_desc 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme; e3 binding domain;
pfam_id 2-oxoacid_dh; Biotin_lipoyl; E3_binding;
pfam_target db:Pfam-A.hmm|PF00198.23 evalue:3.1e-71 score:238.7 best_domain_score:238.4 name:2-oxoacid_dh; db:Pfam-A.hmm|PF00364.22 evalue:1.1e-15 score:56.4 best_domain_score:55.4 name:Biotin_lipoyl; db:Pfam-A.hmm|PF02817.17 evalue:3.7e-14 score:52.0 best_domain_score:47.6 name:E3_binding;
sprot_desc Dihydrolipoyllysine-residue acyltransferase component of branched-chain alpha-ketoacid dehydrogenase complex;
sprot_id sp|O06159|BKDC_MYCTU;
sprot_target db:uniprot_sprot|sp|O06159|BKDC_MYCTU 4 526 evalue:1.9e-55 qcov:99.10 identity:32.90;
69938 68967 CDS
ID metaerg.pl|12005
allec_ids 1.2.4.4;
allgo_ids GO:0003863;
allko_ids K00161; K11381; K00162; K00167; K00615;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666337.1 1 323 evalue:1.1e-158 qcov:100.00 identity:85.10;
kegg_pathway_id 00620; 00252; 01051; 00650; 00710; 00010; 00030; 00280; 00290; 00020;
kegg_pathway_name Pyruvate metabolism; Alanine and aspartate metabolism; Biosynthesis of ansamycins; Butanoate metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Pentose phosphate pathway; Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Citrate cycle (TCA cycle);
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-5046;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF02780; PF02779;
pfam_desc Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain;
pfam_id Transketolase_C; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF02780.20 evalue:1.8e-39 score:133.7 best_domain_score:132.9 name:Transketolase_C; db:Pfam-A.hmm|PF02779.24 evalue:6.3e-43 score:145.7 best_domain_score:145.2 name:Transket_pyr;
sprot_desc 3-methyl-2-oxobutanoate dehydrogenase subunit beta;
sprot_id sp|P9WIS0|BKDB_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WIS0|BKDB_MYCTO 4 321 evalue:4.2e-114 qcov:98.50 identity:63.90;
71077 69938 CDS
ID metaerg.pl|12006
allec_ids 1.2.4.4; 1.2.4.1;
allgo_ids GO:0016624; GO:0003863; GO:0046872;
allko_ids K00162; K00166; K11381; K00161;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442155.1 20 377 evalue:2.1e-153 qcov:94.50 identity:74.60;
kegg_pathway_id 00650; 00020; 00280; 00010; 00252; 00290; 00620;
kegg_pathway_name Butanoate metabolism; Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Alanine and aspartate metabolism; Valine, leucine and isoleucine biosynthesis; Pyruvate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PYRUVDEHYD-PWY; PWY-5046; PWY-5173; PWY-5464;
metacyc_pathway_name pyruvate decarboxylation to acetyl CoA;; 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;; superpathway of acetyl-CoA biosynthesis;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Respiration;; Acetyl-CoA-Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00676;
pfam_desc Dehydrogenase E1 component;
pfam_id E1_dh;
pfam_target db:Pfam-A.hmm|PF00676.20 evalue:2.2e-77 score:259.2 best_domain_score:258.9 name:E1_dh;
sprot_desc 3-methyl-2-oxobutanoate dehydrogenase subunit alpha;
sprot_id sp|P9WIS2|BKDA_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WIS2|BKDA_MYCTO 30 374 evalue:1.0e-90 qcov:91.00 identity:51.90;
tigrfam_acc TIGR03181;
tigrfam_desc pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name PDH_E1_alph_x;
tigrfam_sub1role Pyruvate dehydrogenase;
tigrfam_target db:TIGRFAMs.hmm|TIGR03181 evalue:6.3e-133 score:442.0 best_domain_score:441.8 name:TIGR03181;
71393 71803 CDS
ID metaerg.pl|12007
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666336.1 1 131 evalue:3.9e-46 qcov:96.30 identity:77.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.7e-18 score:66.7 best_domain_score:65.8 name:Usp;
sprot_desc Universal stress protein MSMEG_4207;
sprot_id sp|A0QZZ6|Y4207_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QZZ6|Y4207_MYCS2 3 130 evalue:4.2e-15 qcov:94.10 identity:42.20;
72946 72134 CDS
ID metaerg.pl|12008
allec_ids 1.3.1.9;
allgo_ids GO:0005618; GO:0005576; GO:0004318; GO:0016631; GO:0006633; GO:0046677;
allko_ids K11611;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441475.1 1 256 evalue:4.3e-113 qcov:94.80 identity:76.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id FASYN-ELONG-PWY; PWY0-881; PWY-6285; PWY-6113; PWY-5156; PWY-5989; PWY-5971;
metacyc_pathway_name fatty acid elongation -- saturated;; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis II (plant);; stearate biosynthesis II (bacteria and plants);; palmitate biosynthesis II (bacteria and plants);;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Stearate-Biosynthesis;; Palmitate-Biosynthesis;;
pfam_acc PF00106; PF13561;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase;
pfam_id adh_short; adh_short_C2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2.2e-12 score:46.1 best_domain_score:45.6 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.3e-66 score:222.9 best_domain_score:222.7 name:adh_short_C2;
sprot_desc Enoyl-[acyl-carrier-protein] reductase [NADH];
sprot_id sp|P42829|INHA_MYCS2;
sprot_target db:uniprot_sprot|sp|P42829|INHA_MYCS2 2 249 evalue:7.7e-69 qcov:91.90 identity:50.80;
73349 72951 CDS
ID metaerg.pl|12009
allgo_ids GO:0000287; GO:0008897;
genomedb_OC d__Bacteria;p__Dormibacterota;c__Dormibacteria;o__UBA8260;f__UBA8260;g__UBA8260;s__UBA8260 sp003141695;
genomedb_acc GCA_003141695.1;
genomedb_target db:genomedb|GCA_003141695.1|PLNE01000097.1_7 6 132 evalue:3.0e-11 qcov:96.20 identity:39.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF01648;
pfam_desc 4'-phosphopantetheinyl transferase superfamily;
pfam_id ACPS;
pfam_target db:Pfam-A.hmm|PF01648.20 evalue:2.4e-12 score:46.2 best_domain_score:46.0 name:ACPS;
tigrfam_acc TIGR00556;
tigrfam_desc phosphopantetheine--protein transferase domain;
tigrfam_mainrole Protein fate;
tigrfam_name pantethn_trn;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00556 evalue:1.3e-12 score:47.1 best_domain_score:46.4 name:TIGR00556;
74083 73346 CDS
ID metaerg.pl|12010
allgo_ids GO:0016746;
allko_ids K13512; K13510;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666333.1 21 236 evalue:1.9e-75 qcov:88.20 identity:66.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF01553;
pfam_desc Acyltransferase;
pfam_id Acyltransferase;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:4.4e-24 score:83.8 best_domain_score:83.5 name:Acyltransferase;
75327 74080 CDS
ID metaerg.pl|12011
allec_ids 2.3.1.179;
allgo_ids GO:0016747; GO:0005829; GO:0004315; GO:0033817; GO:0006633;
allko_ids K09458;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666331.1 4 415 evalue:1.2e-175 qcov:99.30 identity:77.20;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWYG-321; PWY-5973; PWY-6113; PWY-6285;
metacyc_pathway_name mycolate biosynthesis;; cis-vaccenate biosynthesis;; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);;
metacyc_pathway_type Fatty-acid-biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00109; PF02801; PF00108;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id ketoacyl-synt; Ketoacyl-synt_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:7e-54 score:182.3 best_domain_score:181.3 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:1.6e-35 score:120.9 best_domain_score:120.7 name:Ketoacyl-synt_C; db:Pfam-A.hmm|PF00108.23 evalue:4.1e-08 score:32.1 best_domain_score:29.6 name:Thiolase_N;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] synthase 2;
sprot_id sp|O34340|FABF_BACSU;
sprot_target db:uniprot_sprot|sp|O34340|FABF_BACSU 3 412 evalue:7.2e-98 qcov:98.80 identity:46.80;
tigrfam_acc TIGR03150;
tigrfam_desc beta-ketoacyl-acyl-carrier-protein synthase II;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabF;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR03150 evalue:6.2e-151 score:501.8 best_domain_score:501.7 name:TIGR03150;
75560 75324 CDS
ID metaerg.pl|12012
allgo_ids GO:0005737; GO:0000036;
allko_ids K05939; K01586; K01897; K01909; K02078;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442154.1 7 77 evalue:1.1e-21 qcov:91.00 identity:81.70;
kegg_pathway_id 00071; 00300; 00564;
kegg_pathway_name Fatty acid metabolism; Lysine biosynthesis; Glycerophospholipid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
pfam_acc PF00550;
pfam_desc Phosphopantetheine attachment site;
pfam_id PP-binding;
pfam_target db:Pfam-A.hmm|PF00550.25 evalue:1.2e-15 score:56.8 best_domain_score:56.6 name:PP-binding;
sprot_desc Acyl carrier protein;
sprot_id sp|C1D0N8|ACP_DEIDV;
sprot_target db:uniprot_sprot|sp|C1D0N8|ACP_DEIDV 6 77 evalue:2.9e-08 qcov:92.30 identity:42.50;
76410 75685 CDS
ID metaerg.pl|12013
allec_ids 1.1.1.100;
allgo_ids GO:0003824; GO:0050662; GO:0005829; GO:0102131; GO:0102132; GO:0004316; GO:0042802; GO:0046872; GO:0051287; GO:0050661; GO:0009102; GO:0006633; GO:0030497; GO:0008610;
allko_ids K07535; K12420; K00022; K08683; K00059;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666329.1 5 241 evalue:2.3e-89 qcov:98.30 identity:78.10;
kegg_pathway_id 00071; 00650; 00061; 00062; 01040; 00632; 00930; 00380; 00310; 00280; 00281;
kegg_pathway_name Fatty acid metabolism; Butanoate metabolism; Fatty acid biosynthesis; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids; Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id FASYN-ELONG-PWY; PWY-6519; PWY-5971; PWY-5156; PWY-6282; PWY0-881; PWYG-321; BIOTIN-BIOSYNTHESIS-PWY; PWY-5973; PWY-5989; PWY-5367; PWY-6285; PWY-6113;
metacyc_pathway_name fatty acid elongation -- saturated;; 8-amino-7-oxononanoate biosynthesis I;; palmitate biosynthesis II (bacteria and plants);; superpathway of fatty acid biosynthesis II (plant);; palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate);; superpathway of fatty acid biosynthesis I (E. coli);; mycolate biosynthesis;; biotin biosynthesis I;; cis-vaccenate biosynthesis;; stearate biosynthesis II (bacteria and plants);; petroselinate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;;
metacyc_pathway_type Fatty-acid-biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;; Palmitate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Palmitoleate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; BIOTIN-SYN; Super-Pathways;; Unsaturated-Fatty-Acids-Biosynthesis;; Stearate-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00106; PF13561; PF01370; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain;
pfam_id adh_short; adh_short_C2; Epimerase; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:9.2e-55 score:184.4 best_domain_score:183.7 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:5.7e-59 score:198.7 best_domain_score:198.5 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:5.1e-06 score:25.3 best_domain_score:23.9 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:7.6e-19 score:67.5 best_domain_score:67.0 name:KR;
sp YES;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] reductase FabG;
sprot_id sp|P0AEK2|FABG_ECOLI;
sprot_target db:uniprot_sprot|sp|P0AEK2|FABG_ECOLI 4 238 evalue:3.5e-44 qcov:97.50 identity:45.80;
75685 75756 signal_peptide
ID metaerg.pl|12014
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
77456 76407 CDS
ID metaerg.pl|12015
allec_ids 2.3.1.180;
allgo_ids GO:0004315; GO:0006633; GO:0005737; GO:0033818;
allko_ids K21788;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669613.1 12 334 evalue:1.0e-122 qcov:92.60 identity:71.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY-6519; PWY-5156; PWY-4381; PWY0-881; PWY-6285; PWY-6113; FASYN-INITIAL-PWY; BIOTIN-BIOSYNTHESIS-PWY;
metacyc_pathway_name 8-amino-7-oxononanoate biosynthesis I;; superpathway of fatty acid biosynthesis II (plant);; fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; biotin biosynthesis I;;
metacyc_pathway_type 7-Keto-8-aminopelargonate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;;
pfam_acc PF08545; PF08541; PF00108;
pfam_desc 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; Thiolase, N-terminal domain;
pfam_id ACP_syn_III; ACP_syn_III_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF08545.10 evalue:2.6e-25 score:87.3 best_domain_score:87.1 name:ACP_syn_III; db:Pfam-A.hmm|PF08541.10 evalue:9.3e-37 score:124.3 best_domain_score:122.2 name:ACP_syn_III_C; db:Pfam-A.hmm|PF00108.23 evalue:9.8e-09 score:34.2 best_domain_score:31.5 name:Thiolase_N;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 3;
sprot_id sp|O54151|FABH3_STRCO;
sprot_target db:uniprot_sprot|sp|O54151|FABH3_STRCO 16 333 evalue:2.5e-83 qcov:91.10 identity:54.50;
tigrfam_acc TIGR00747;
tigrfam_desc 3-oxoacyl-[acyl-carrier-protein] synthase III;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name fabH;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00747 evalue:7.5e-111 score:369.4 best_domain_score:369.2 name:TIGR00747;
78448 77525 CDS
ID metaerg.pl|12016
allec_ids 2.3.1.39;
allgo_ids GO:0005829; GO:0004314; GO:0006633;
allko_ids K00645;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441473.1 4 303 evalue:1.4e-75 qcov:97.70 identity:56.60;
kegg_pathway_id 00061;
kegg_pathway_name Fatty acid biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.115337; 0.115312; 25.1013; 0.139904; 25.4718;
metacyc_pathway_id PWY0-881; PWY-4381; FASYN-INITIAL-PWY; PWY-6285; PWY-6113; PWY-5156;
metacyc_pathway_name superpathway of fatty acid biosynthesis I (E. coli);; fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis initiation (E. coli);; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis II (plant);;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00698;
pfam_desc Acyl transferase domain;
pfam_id Acyl_transf_1;
pfam_target db:Pfam-A.hmm|PF00698.21 evalue:9.9e-31 score:106.6 best_domain_score:105.9 name:Acyl_transf_1;
sprot_desc Malonyl CoA-acyl carrier protein transacylase;
sprot_id sp|P71019|FABD_BACSU;
sprot_target db:uniprot_sprot|sp|P71019|FABD_BACSU 4 307 evalue:5.6e-39 qcov:99.00 identity:36.70;
>Feature NODE_92_length_78211_cov_7.45505
1 510 CDS
ID metaerg.pl|12017
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0005737; GO:0003677; GO:0016987; GO:0001123;
allko_ids K03086;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002500925;
genomedb_acc GCA_002500925.1;
genomedb_target db:genomedb|GCA_002500925.1|DLTN01000073.1_19 1 169 evalue:1.6e-73 qcov:100.00 identity:89.30;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF04539; PF04545;
pfam_desc Sigma-70 region 3; Sigma-70, region 4;
pfam_id Sigma70_r3; Sigma70_r4;
pfam_target db:Pfam-A.hmm|PF04539.16 evalue:9.6e-15 score:53.7 best_domain_score:45.8 name:Sigma70_r3; db:Pfam-A.hmm|PF04545.16 evalue:3e-18 score:64.3 best_domain_score:63.3 name:Sigma70_r4;
sprot_desc RNA polymerase sigma factor SigA;
sprot_id sp|P06224|SIGA_BACSU;
sprot_target db:uniprot_sprot|sp|P06224|SIGA_BACSU 1 167 evalue:1.9e-28 qcov:98.80 identity:39.50;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:2.2e-12 score:46.0 best_domain_score:44.9 name:TIGR02937;
556 1482 CDS
ID metaerg.pl|12018
allec_ids 3.6.1.-; 3.6.-.-;
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0046872; GO:0019843; GO:0042274;
allko_ids K06949;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91788.1 13 308 evalue:4.6e-79 qcov:96.10 identity:55.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id PWY-6502; PWY-6147; FOLSYN-PWY; PWY-6383; ALL-CHORISMATE-PWY; PWY-6404; PWY-5354;
metacyc_pathway_name oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; superpathway of tetrahydrofolate biosynthesis and salvage;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of chorismate metabolism;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ;
metacyc_pathway_type Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; ;
pfam_acc PF01926; PF03193;
pfam_desc 50S ribosome-binding GTPase; RsgA GTPase;
pfam_id MMR_HSR1; RsgA_GTPase;
pfam_target db:Pfam-A.hmm|PF01926.23 evalue:9.5e-06 score:24.9 best_domain_score:23.1 name:MMR_HSR1; db:Pfam-A.hmm|PF03193.16 evalue:2.2e-49 score:166.8 best_domain_score:166.5 name:RsgA_GTPase;
sprot_desc Small ribosomal subunit biogenesis GTPase RsgA;
sprot_id sp|C1ABL6|RSGA_GEMAT;
sprot_target db:uniprot_sprot|sp|C1ABL6|RSGA_GEMAT 14 304 evalue:3.6e-62 qcov:94.50 identity:44.90;
tigrfam_acc TIGR00157;
tigrfam_desc ribosome small subunit-dependent GTPase A;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00157;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00157 evalue:4.9e-67 score:225.2 best_domain_score:224.9 name:TIGR00157;
2242 1466 CDS
ID metaerg.pl|12019
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015439;
allko_ids K02023; K01995; K02049; K01998; K10111; K02013; K01996; K06861; K02071; K02045; K09817; K02010; K02052; K02006;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06438.1 1 256 evalue:9.5e-86 qcov:99.20 identity:64.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6171; PWY-6135; PWY-6188; PWY-6166;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.1e-09 score:36.8 best_domain_score:18.6 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:4.8e-31 score:107.3 best_domain_score:107.0 name:ABC_tran;
sprot_desc Hemin import ATP-binding protein HmuV;
sprot_id sp|Q0SIB7|HMUV_RHOJR;
sprot_target db:uniprot_sprot|sp|Q0SIB7|HMUV_RHOJR 7 257 evalue:6.5e-49 qcov:97.30 identity:42.60;
3234 2239 CDS
ID metaerg.pl|12020
allgo_ids GO:0005215; GO:0016020; GO:0016021; GO:0005886;
allko_ids K02015;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000274.1_14 1 331 evalue:4.3e-107 qcov:100.00 identity:66.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF01032;
pfam_desc FecCD transport family;
pfam_id FecCD;
pfam_target db:Pfam-A.hmm|PF01032.18 evalue:1.2e-94 score:316.0 best_domain_score:315.8 name:FecCD;
sprot_desc Cobalamin import system permease protein BtuC;
sprot_id sp|B0R5G3|BTUCA_HALS3;
sprot_target db:uniprot_sprot|sp|B0R5G3|BTUCA_HALS3 40 331 evalue:3.9e-54 qcov:88.20 identity:45.40;
tm_num 8;
3234 2239 transmembrane_helix
ID metaerg.pl|12021
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
topology i2251-2319o2413-2481i2500-2568o2581-2640i2677-2745o2803-2871i2962-3030o3157-3213i;
4019 3231 CDS
ID metaerg.pl|12022
allgo_ids GO:0042597; GO:0031419; GO:0015889;
allko_ids K02016; K06858;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV24684.1 9 261 evalue:3.6e-64 qcov:96.60 identity:52.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF01497;
pfam_desc Periplasmic binding protein;
pfam_id Peripla_BP_2;
pfam_target db:Pfam-A.hmm|PF01497.18 evalue:1.7e-24 score:86.0 best_domain_score:85.7 name:Peripla_BP_2;
sprot_desc Vitamin B12-binding protein;
sprot_id sp|A7FM05|BTUF_YERP3;
sprot_target db:uniprot_sprot|sp|A7FM05|BTUF_YERP3 25 217 evalue:1.3e-15 qcov:73.70 identity:25.80;
5185 4139 CDS
ID metaerg.pl|12023
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2982;s__UBA2982 sp002347035;
genomedb_acc GCA_002347035.1;
genomedb_target db:genomedb|GCA_002347035.1|DEAM01000026.1_4 8 343 evalue:9.4e-28 qcov:96.60 identity:31.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
sp YES;
4139 4198 lipoprotein_signal_peptide
ID metaerg.pl|12024
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
5322 5801 CDS
ID metaerg.pl|12025
allec_ids 1.5.1.-;
allgo_ids GO:0010181; GO:0016491;
allko_ids K00492;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000028.1_241 1 159 evalue:2.3e-34 qcov:100.00 identity:47.20;
kegg_pathway_id 00150; 00120; 00361; 00626; 00622; 00624; 00360; 00340; 00350; 00680; 00903;
kegg_pathway_name Androgen and estrogen metabolism; Bile acid biosynthesis; gamma-Hexachlorocyclohexane degradation; Naphthalene and anthracene degradation; Toluene and xylene degradation; 1- and 2-Methylnaphthalene degradation; Phenylalanine metabolism; Histidine metabolism; Tyrosine metabolism; Methane metabolism; Limonene and pinene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id PWY-1723; PWY-6565; PWY-6559; PWY-6562; PWY-1882; PWY0-1433;
metacyc_pathway_name formaldehyde oxidation VI (H4MPT pathway);; superpathway of polyamine biosynthesis III;; spermidine biosynthesis II;; norspermidine biosynthesis;; superpathway of C1 compounds oxidation to CO2;; tetrahydromonapterin biosynthesis;;
metacyc_pathway_type Formaldehyde-Oxidation;; Polyamine-Biosynthesis; Super-Pathways;; Spermidine-Biosynthesis;; Polyamine-Biosynthesis;; C1-COMPOUNDS; Super-Pathways;; Cofactor-Biosynthesis;;
pfam_acc PF01613;
pfam_desc Flavin reductase like domain;
pfam_id Flavin_Reduct;
pfam_target db:Pfam-A.hmm|PF01613.18 evalue:1e-37 score:128.8 best_domain_score:128.6 name:Flavin_Reduct;
sprot_desc Probable flavin reductase;
sprot_id sp|Q92ZM6|Y0793_RHIME;
sprot_target db:uniprot_sprot|sp|Q92ZM6|Y0793_RHIME 8 156 evalue:2.1e-26 qcov:93.70 identity:42.30;
5844 7364 CDS
ID metaerg.pl|12026
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000274.1_18 11 416 evalue:4.5e-23 qcov:80.20 identity:30.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
tm_num 6;
5844 7364 transmembrane_helix
ID metaerg.pl|12027
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
topology o5871-5939i5952-6020o6063-6131i6144-6212o6255-6323i6342-6401o;
7361 9631 CDS
ID metaerg.pl|12028
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000274.1_19 1 740 evalue:1.5e-110 qcov:97.90 identity:38.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:4.8e-05 score:23.2 best_domain_score:21.9 name:Metallophos;
11648 9588 CDS
ID metaerg.pl|12029
allec_ids 3.5.2.-;
allgo_ids GO:0016787; GO:0016810; GO:0008652;
allko_ids K01473;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91744.1 13 685 evalue:3.7e-209 qcov:98.10 identity:59.30;
kegg_pathway_id 00330;
kegg_pathway_name Arginine and proline metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id PWY-5497; P621-PWY; P164-PWY;
metacyc_pathway_name purine nucleobases degradation II (anaerobic);; nylon-6 oligomer degradation;; purine nucleobases degradation I (anaerobic);;
metacyc_pathway_type Fermentation; Purine-Degradation;; Other-Degradation;; Fermentation; Purine-Degradation;;
pfam_acc PF01968; PF05378;
pfam_desc Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region;
pfam_id Hydantoinase_A; Hydant_A_N;
pfam_target db:Pfam-A.hmm|PF01968.18 evalue:1.2e-93 score:312.9 best_domain_score:308.6 name:Hydantoinase_A; db:Pfam-A.hmm|PF05378.13 evalue:4.4e-47 score:159.3 best_domain_score:153.1 name:Hydant_A_N;
sprot_desc Putative D-/L-hydantoinase subunit A;
sprot_id sp|Q01262|HYUA_PSESN;
sprot_target db:uniprot_sprot|sp|Q01262|HYUA_PSESN 29 668 evalue:1.3e-96 qcov:93.30 identity:34.50;
11661 13166 CDS
ID metaerg.pl|12030
allec_ids 4.1.3.27;
allgo_ids GO:0009058; GO:0004049; GO:0046872; GO:0000162;
allko_ids K13503; K01658; K13501; K13950; K13497; K01656; K01663; K01665; K01664; K02619; K03342; K01657;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000077.1_1 1 496 evalue:4.0e-205 qcov:99.00 identity:74.00;
kegg_pathway_id 02020; 00620; 00400; 00790;
kegg_pathway_name Two-component system - General; Pyruvate metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id TRPSYN-PWY; COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY; PWY-5958;
metacyc_pathway_name L-tryptophan biosynthesis;; superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;; acridone alkaloid biosynthesis;;
metacyc_pathway_type TRYPTOPHAN-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; ALKALOIDS-SYN;;
pfam_acc PF04715; PF00425;
pfam_desc Anthranilate synthase component I, N terminal region; chorismate binding enzyme;
pfam_id Anth_synt_I_N; Chorismate_bind;
pfam_target db:Pfam-A.hmm|PF04715.13 evalue:7.7e-32 score:109.7 best_domain_score:99.6 name:Anth_synt_I_N; db:Pfam-A.hmm|PF00425.18 evalue:1.1e-97 score:325.9 best_domain_score:324.6 name:Chorismate_bind;
sprot_desc Anthranilate synthase component 1;
sprot_id sp|P20579|TRPE_PSEPU;
sprot_target db:uniprot_sprot|sp|P20579|TRPE_PSEPU 8 499 evalue:5.6e-129 qcov:98.20 identity:52.90;
tigrfam_acc TIGR00564;
tigrfam_desc anthranilate synthase component I;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name trpE_most;
tigrfam_sub1role Aromatic amino acid family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00564 evalue:1.3e-166 score:554.3 best_domain_score:554.1 name:TIGR00564;
14610 13243 CDS
ID metaerg.pl|12031
allec_ids 3.4.13.18;
allgo_ids GO:0016787; GO:0005829; GO:0005654; GO:0103046; GO:0004180; GO:0102008; GO:0046872; GO:0008237;
allko_ids K01438; K01439; K08660;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000017.1_17 12 453 evalue:6.7e-175 qcov:97.10 identity:68.10;
kegg_pathway_id 00220; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:8.8e-23 score:79.6 best_domain_score:78.7 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:2.4e-36 score:124.6 best_domain_score:124.0 name:Peptidase_M20;
sprot_desc Cytosolic non-specific dipeptidase;
sprot_id sp|Q3ZC84|CNDP2_BOVIN;
sprot_target db:uniprot_sprot|sp|Q3ZC84|CNDP2_BOVIN 13 454 evalue:1.4e-62 qcov:97.10 identity:33.80;
14929 14651 CDS
ID metaerg.pl|12032
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000017.1_18 1 89 evalue:6.5e-29 qcov:96.70 identity:73.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
tm_num 3;
14929 14651 transmembrane_helix
ID metaerg.pl|12033
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
topology o14660-14725i14759-14827o14840-14908i;
15750 15079 CDS
ID metaerg.pl|12034
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000077.1_4 1 222 evalue:2.7e-44 qcov:99.60 identity:48.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
16562 15915 CDS
ID metaerg.pl|12035
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0005737; GO:0003677; GO:0016987;
allko_ids K03088;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06458.1 20 215 evalue:2.5e-95 qcov:91.20 identity:88.80;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF07638; PF04542; PF04545; PF08281;
pfam_desc ECF sigma factor; Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_ECF; Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF07638.11 evalue:5.9e-06 score:25.5 best_domain_score:23.9 name:Sigma70_ECF; db:Pfam-A.hmm|PF04542.14 evalue:2.3e-19 score:68.2 best_domain_score:68.0 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:1.2e-11 score:43.2 best_domain_score:42.0 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:6.1e-18 score:63.5 best_domain_score:62.3 name:Sigma70_r4_2;
sprot_desc ECF RNA polymerase sigma-E factor;
sprot_id sp|P0AGB8|RPOE_ECO57;
sprot_target db:uniprot_sprot|sp|P0AGB8|RPOE_ECO57 26 211 evalue:2.8e-21 qcov:86.50 identity:37.20;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:8.5e-34 score:115.7 best_domain_score:115.5 name:TIGR02937;
17856 16738 CDS
ID metaerg.pl|12036
allec_ids 1.2.4.1;
allgo_ids GO:0008661; GO:0016114; GO:0009507; GO:0004739; GO:0006086; GO:0006096;
allko_ids K00166; K11381; K00161; K00162;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000017.1_21 1 372 evalue:7.2e-135 qcov:100.00 identity:65.90;
kegg_pathway_id 00290; 00620; 00252; 00010; 00280; 00020; 00650;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Pyruvate metabolism; Alanine and aspartate metabolism; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation; Citrate cycle (TCA cycle); Butanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id PYRUVDEHYD-PWY; PWY-5173; PWY-5464;
metacyc_pathway_name pyruvate decarboxylation to acetyl CoA;; superpathway of acetyl-CoA biosynthesis;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Acetyl-CoA-Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF13292; PF00676; PF02775;
pfam_desc 1-deoxy-D-xylulose-5-phosphate synthase; Dehydrogenase E1 component; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain;
pfam_id DXP_synthase_N; E1_dh; TPP_enzyme_C;
pfam_target db:Pfam-A.hmm|PF13292.6 evalue:4.9e-06 score:25.2 best_domain_score:24.2 name:DXP_synthase_N; db:Pfam-A.hmm|PF00676.20 evalue:4.9e-52 score:176.0 best_domain_score:175.7 name:E1_dh; db:Pfam-A.hmm|PF02775.21 evalue:3.6e-05 score:22.8 best_domain_score:21.6 name:TPP_enzyme_C;
sprot_desc Pyruvate dehydrogenase E1 component subunit alpha;
sprot_id sp|P51267|ODPA_PORPU;
sprot_target db:uniprot_sprot|sp|P51267|ODPA_PORPU 47 343 evalue:6.6e-26 qcov:79.80 identity:27.50;
18487 19065 CDS
ID metaerg.pl|12037
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000077.1_7 1 185 evalue:4.4e-35 qcov:96.40 identity:47.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
19144 19614 CDS
ID metaerg.pl|12038
allec_ids 1.11.1.15;
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005737; GO:0008379; GO:0045454; GO:0034599;
allko_ids K03564; K11188; K13279; K11065; K00430; K11186; K11185; K03386;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002724575;
genomedb_acc GCA_002724575.1;
genomedb_target db:genomedb|GCA_002724575.1|MBO76984.1 7 154 evalue:1.9e-52 qcov:94.90 identity:63.50;
kegg_pathway_id 00480; 00360; 00680; 00940;
kegg_pathway_name Glutathione metabolism; Phenylalanine metabolism; Methane metabolism; Phenylpropanoid biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF00578; PF08534;
pfam_desc AhpC/TSA family; Redoxin;
pfam_id AhpC-TSA; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:6.1e-43 score:144.9 best_domain_score:144.7 name:AhpC-TSA; db:Pfam-A.hmm|PF08534.10 evalue:5e-25 score:87.2 best_domain_score:87.0 name:Redoxin;
sprot_desc Putative peroxiredoxin bcp;
sprot_id sp|Q83CY8|BCP_COXBU;
sprot_target db:uniprot_sprot|sp|Q83CY8|BCP_COXBU 8 153 evalue:5.0e-44 qcov:93.60 identity:54.10;
20272 19736 CDS
ID metaerg.pl|12039
allgo_ids GO:0048037;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000017.1_22 1 155 evalue:5.5e-40 qcov:87.10 identity:56.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF13380;
pfam_desc CoA binding domain;
pfam_id CoA_binding_2;
pfam_target db:Pfam-A.hmm|PF13380.6 evalue:9.5e-29 score:99.5 best_domain_score:99.2 name:CoA_binding_2;
sprot_desc hypothetical protein;
sprot_id sp|Q45065|YNET_BACSU;
sprot_target db:uniprot_sprot|sp|Q45065|YNET_BACSU 19 148 evalue:1.6e-14 qcov:73.00 identity:34.60;
20498 21439 CDS
ID metaerg.pl|12040
allko_ids K08884; K07711; K07768; K11633; K07778; K07718; K07651; K07648; K02478; K07679; K03407; K07649; K00936; K07682; K07654; K07652; K07673; K07639; K08475; K07646; K07641; K08282; K07704; K07677; K07645; K07708; K07643; K07642; K11711; K11640; K02484; K07636; K07638; K07653; K02480; K08801; K02482; K07678; K11527; K02030; K10916; K07674; K08479; K03388; K02668; K01768; K07656; K07710; K07640; K07716; K02489; K11357; K11629; K10125; K04757; K07769; K11383; K02486; K07717; K07675; K13040; K10942; K07647; K07680; K10681; K07676; K06379; K07644; K07709;
kegg_pathway_id 03090; 02020; 05111; 00790; 00230;
kegg_pathway_name Type II secretion system; Two-component system - General; Vibrio cholerae pathogenic cycle; Folate biosynthesis; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF02518;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase;
pfam_id HATPase_c;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:5.6e-14 score:51.8 best_domain_score:50.1 name:HATPase_c;
sp YES;
tm_num 1;
20498 20578 signal_peptide
ID metaerg.pl|12041
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
20498 21439 transmembrane_helix
ID metaerg.pl|12042
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
topology o20507-20560i;
22391 21459 CDS
ID metaerg.pl|12043
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06463.1 12 304 evalue:3.0e-62 qcov:94.50 identity:48.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.3e-35 score:121.8 best_domain_score:76.6 name:EamA;
tm_num 10;
22391 21459 transmembrane_helix
ID metaerg.pl|12044
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
topology i21492-21560o21588-21647i21684-21737o21765-21833i21852-21920o21930-21998i22017-22085o22122-22190i22209-22277o22287-22355i;
22507 24387 CDS
ID metaerg.pl|12045
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0016887; GO:0006935; GO:0031154; GO:0006972;
allko_ids K06861; K01996; K02045; K02006; K02052;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000111.1_5 27 606 evalue:3.9e-218 qcov:92.70 identity:70.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:5.2e-59 score:199.4 best_domain_score:199.1 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:4.8e-33 score:113.8 best_domain_score:112.6 name:ABC_tran;
sprot_desc ABC transporter B family member 1;
sprot_id sp|Q54BU4|ABCB1_DICDI;
sprot_target db:uniprot_sprot|sp|Q54BU4|ABCB1_DICDI 19 596 evalue:8.5e-103 qcov:92.30 identity:37.90;
tm_num 6;
22507 24387 transmembrane_helix
ID metaerg.pl|12046
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
topology i22624-22692o22750-22818i22987-23040o23050-23109i23287-23355o23398-23466i;
26312 24291 CDS
ID metaerg.pl|12047
allec_ids 1.3.-.-;
allgo_ids GO:0016627; GO:0055114; GO:0050660;
allko_ids K11731; K11538; K00249; K14448; K06446; K00253; K00248; K11410; K09478; K00120; K00232; K00252;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25991.1 23 637 evalue:3.7e-254 qcov:91.40 identity:68.90;
kegg_pathway_id 00650; 00640; 00071; 00592; 00410; 01040; 00903; 00361; 00930; 00632; 00380; 00624; 00310; 00280; 00626;
kegg_pathway_name Butanoate metabolism; Propanoate metabolism; Fatty acid metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; gamma-Hexachlorocyclohexane degradation; Caprolactam degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; 1- and 2-Methylnaphthalene degradation; Lysine degradation; Valine, leucine and isoleucine degradation; Naphthalene and anthracene degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id PWY-5319; PWY-5140;
metacyc_pathway_name coumarin metabolism (to melilotic acid);; cannabinoid biosynthesis;;
metacyc_pathway_type COUMARIN-SYN; PHENYLPROPANOID-DERIVATIVE-DEG;; TERPENOPHENOLICS-SYN;;
pfam_acc PF00441; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:2.4e-31 score:108.2 best_domain_score:108.0 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF02770.19 evalue:5.1e-24 score:83.5 best_domain_score:82.6 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:3.4e-25 score:88.1 best_domain_score:86.3 name:Acyl-CoA_dh_N;
sprot_desc Probable acyl-CoA dehydrogenase FadE10;
sprot_id sp|P9WQF6|Y873_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WQF6|Y873_MYCTO 24 653 evalue:7.4e-177 qcov:93.60 identity:52.80;
27665 26367 CDS
ID metaerg.pl|12048
allgo_ids GO:0006629;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002724575;
genomedb_acc GCA_002724575.1;
genomedb_target db:genomedb|GCA_002724575.1|MBO76990.1 7 384 evalue:9.9e-120 qcov:87.50 identity:56.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF01734;
pfam_desc Patatin-like phospholipase;
pfam_id Patatin;
pfam_target db:Pfam-A.hmm|PF01734.22 evalue:2.4e-23 score:82.6 best_domain_score:81.5 name:Patatin;
27968 29680 CDS
ID metaerg.pl|12049
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000006.1_119 30 567 evalue:1.7e-111 qcov:94.40 identity:43.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF01979;
pfam_desc Amidohydrolase family;
pfam_id Amidohydro_1;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:5.3e-05 score:21.9 best_domain_score:20.2 name:Amidohydro_1;
sp YES;
27968 28057 signal_peptide
ID metaerg.pl|12050
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
29677 32562 CDS
ID metaerg.pl|12051
allgo_ids GO:0016787;
allko_ids K01468;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000006.1_120 6 960 evalue:2.3e-270 qcov:99.40 identity:51.50;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:9.4e-25 score:86.9 best_domain_score:40.0 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:5.1e-20 score:71.6 best_domain_score:40.1 name:Amidohydro_3;
sp YES;
tm_num 1;
29677 29751 signal_peptide
ID metaerg.pl|12052
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
29677 32562 transmembrane_helix
ID metaerg.pl|12053
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
topology i29695-29763o;
33074 32667 CDS
ID metaerg.pl|12054
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25989.1 6 130 evalue:2.9e-25 qcov:92.60 identity:53.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
tm_num 4;
33074 32667 transmembrane_helix
ID metaerg.pl|12055
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
topology o32694-32762i32799-32858o32886-32945i32979-33047o;
33134 35020 CDS
ID metaerg.pl|12056
allec_ids 2.6.1.85;
allgo_ids GO:0009058;
allko_ids K01658; K13501; K13950; K13497; K01656; K01663; K01664; K01665; K02619; K03342; K01657;
kegg_pathway_id 00400; 00790; 02020; 00620;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Folate biosynthesis; Two-component system - General; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id ALL-CHORISMATE-PWY; PWY-6543; FOLSYN-PWY;
metacyc_pathway_name superpathway of chorismate metabolism;; 4-aminobenzoate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;;
metacyc_pathway_type Super-Pathways;; Folate-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;;
pfam_acc PF04715; PF00425;
pfam_desc Anthranilate synthase component I, N terminal region; chorismate binding enzyme;
pfam_id Anth_synt_I_N; Chorismate_bind;
pfam_target db:Pfam-A.hmm|PF04715.13 evalue:3.6e-05 score:23.2 best_domain_score:20.9 name:Anth_synt_I_N; db:Pfam-A.hmm|PF00425.18 evalue:1.4e-88 score:296.0 best_domain_score:295.6 name:Chorismate_bind;
tigrfam_acc TIGR00553;
tigrfam_desc aminodeoxychorismate synthase, component I;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name pabB;
tigrfam_sub1role Folic acid;
tigrfam_target db:TIGRFAMs.hmm|TIGR00553 evalue:1.6e-100 score:335.6 best_domain_score:334.4 name:TIGR00553;
35072 35668 CDS
ID metaerg.pl|12057
allec_ids 4.1.3.27;
allgo_ids GO:0016787; GO:0004049; GO:0006541; GO:0000162;
allko_ids K02619; K03342; K01657; K00766; K01664; K01665; K01663; K01656; K13950; K13497; K01951; K01658; K13501; K13503;
genomedb_OC d__Bacteria;p__Planctomycetota;c__UBA1135;o__UBA1135;f__GCA-002686595;g__GCA-2686595;s__GCA-2686595 sp002686595;
genomedb_acc GCA_002686595.1;
genomedb_target db:genomedb|GCA_002686595.1|MAE28507.1 1 193 evalue:1.5e-46 qcov:97.50 identity:53.90;
kegg_pathway_id 00620; 00983; 00251; 02020; 00230; 00790; 00400;
kegg_pathway_name Pyruvate metabolism; Drug metabolism - other enzymes; Glutamate metabolism; Two-component system - General; Purine metabolism; Folate biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id PWY-5958; TRPSYN-PWY; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY;
metacyc_pathway_name acridone alkaloid biosynthesis;; L-tryptophan biosynthesis;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;;
metacyc_pathway_type ALKALOIDS-SYN;; TRYPTOPHAN-BIOSYNTHESIS;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF00117; PF07722;
pfam_desc Glutamine amidotransferase class-I; Peptidase C26;
pfam_id GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00117.28 evalue:5.7e-42 score:142.9 best_domain_score:142.6 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:1.4e-10 score:40.6 best_domain_score:37.1 name:Peptidase_C26;
sprot_desc Anthranilate synthase component 2;
sprot_id sp|P26922|TRPG_AZOBR;
sprot_target db:uniprot_sprot|sp|P26922|TRPG_AZOBR 1 195 evalue:1.1e-40 qcov:98.50 identity:47.20;
tigrfam_acc TIGR00566;
tigrfam_desc glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase;
tigrfam_name trpG_papA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00566 evalue:1.1e-47 score:161.5 best_domain_score:161.3 name:TIGR00566;
35874 35587 CDS
ID metaerg.pl|12058
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
36106 36564 CDS
ID metaerg.pl|12059
allec_ids 2.6.1.42;
allgo_ids GO:0003824; GO:0052656; GO:0052654; GO:0052655; GO:0009097; GO:0009098; GO:0009099;
allko_ids K00826;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89084.1 4 136 evalue:2.3e-23 qcov:87.50 identity:49.60;
kegg_pathway_id 00770; 00280; 00290;
kegg_pathway_name Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id VALSYN-PWY; PWY-5076; PWY-5078; PWY-5057; PWY0-1061; LEUSYN-PWY; BRANCHED-CHAIN-AA-SYN-PWY; LEU-DEG2-PWY; VALDEG-PWY; PWY-5101; THREOCAT-PWY; PWY-5108; PWY-3001; ALANINE-VALINESYN-PWY; PWY-5104; PWY-5103; ILEUDEG-PWY; ILEUSYN-PWY;
metacyc_pathway_name L-valine biosynthesis;; L-leucine degradation III;; L-isoleucine degradation II;; L-valine degradation II;; superpathway of L-alanine biosynthesis;; L-leucine biosynthesis;; superpathway of branched chain amino acid biosynthesis;; L-leucine degradation I;; L-valine degradation I;; L-isoleucine biosynthesis II;; superpathway of L-threonine metabolism;; L-isoleucine biosynthesis V;; superpathway of L-isoleucine biosynthesis I;; L-alanine biosynthesis I;; L-isoleucine biosynthesis IV;; L-isoleucine biosynthesis III;; L-isoleucine degradation I;; L-isoleucine biosynthesis I (from threonine);;
metacyc_pathway_type VALINE-BIOSYNTHESIS;; LEUCINE-DEG;; ISOLEUCINE-DEG;; VALINE-DEG;; ALANINE-SYN; Super-Pathways;; LEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; LEUCINE-DEG;; VALINE-DEG;; ISOLEUCINE-SYN;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; ALANINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-DEG;; ISOLEUCINE-SYN;;
pfam_acc PF01063;
pfam_desc Amino-transferase class IV;
pfam_id Aminotran_4;
pfam_target db:Pfam-A.hmm|PF01063.19 evalue:2.3e-27 score:95.6 best_domain_score:95.4 name:Aminotran_4;
sprot_desc Probable branched-chain-amino-acid aminotransferase;
sprot_id sp|Q5HRJ8|ILVE_STAEQ;
sprot_target db:uniprot_sprot|sp|Q5HRJ8|ILVE_STAEQ 20 136 evalue:9.0e-06 qcov:77.00 identity:34.60;
37827 37042 CDS
ID metaerg.pl|12060
allko_ids K02342; K02337;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:1.7e-36 score:125.0 best_domain_score:124.5 name:DEDDh;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000028.1_277 8 258 evalue:3.1e-92 qcov:96.20 identity:65.30;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF00929;
pfam_desc Exonuclease;
pfam_id RNase_T;
pfam_target db:Pfam-A.hmm|PF00929.24 evalue:8.1e-22 score:77.7 best_domain_score:77.0 name:RNase_T;
37974 39020 CDS
ID metaerg.pl|12061
allec_ids 1.-.-.-;
allgo_ids GO:0055114; GO:0005829; GO:0070402; GO:0003960; GO:0042803; GO:0048038; GO:0006739; GO:0042981;
allko_ids K10133;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06475.1 13 347 evalue:6.2e-96 qcov:96.30 identity:58.80;
kegg_pathway_id 04115;
kegg_pathway_name p53 signaling pathway;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id PWY-5987; PWY-5479; PWY-5469; PWYG-321; PWY-6113; PWY-5271; PWY-4302; PWY-5826; PWY-2821;
metacyc_pathway_name sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sesamin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;;
metacyc_pathway_type QUINONE-SYN;; LIGNAN-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;;
pfam_acc PF08240; PF00107; PF13602;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N; ADH_zinc_N_2;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:1.1e-06 score:27.7 best_domain_score:26.6 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:4e-20 score:71.4 best_domain_score:70.3 name:ADH_zinc_N; db:Pfam-A.hmm|PF13602.6 evalue:5.4e-17 score:62.3 best_domain_score:60.5 name:ADH_zinc_N_2;
sprot_desc Quinone oxidoreductase PIG3;
sprot_id sp|Q53FA7|QORX_HUMAN;
sprot_target db:uniprot_sprot|sp|Q53FA7|QORX_HUMAN 13 345 evalue:1.4e-49 qcov:95.70 identity:39.10;
tigrfam_acc TIGR02824;
tigrfam_desc putative NAD(P)H quinone oxidoreductase, PIG3 family;
tigrfam_mainrole Unknown function;
tigrfam_name quinone_pig3;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR02824 evalue:1.7e-95 score:318.9 best_domain_score:318.1 name:TIGR02824;
42055 39116 CDS
ID metaerg.pl|12062
allec_ids 1.2.4.2;
allgo_ids GO:0016624; GO:0004591; GO:0030976; GO:0006096; GO:0006099;
allko_ids K00161; K00164; K00166; K01616;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000111.1_29 11 976 evalue:0.0e+00 qcov:98.70 identity:59.30;
kegg_pathway_id 00010; 00310; 00280; 00290; 00020; 00380; 00620; 00252; 00650;
kegg_pathway_name Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Citrate cycle (TCA cycle); Tryptophan metabolism; Pyruvate metabolism; Alanine and aspartate metabolism; Butanoate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id PWY-5084;
metacyc_pathway_name 2-oxoglutarate decarboxylation to succinyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF16078; PF00676; PF16870; PF02779;
pfam_desc 2-oxoglutarate dehydrogenase N-terminus; Dehydrogenase E1 component; 2-oxoglutarate dehydrogenase C-terminal; Transketolase, pyrimidine binding domain;
pfam_id 2-oxogl_dehyd_N; E1_dh; OxoGdeHyase_C; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF16078.5 evalue:4.8e-10 score:38.1 best_domain_score:37.0 name:2-oxogl_dehyd_N; db:Pfam-A.hmm|PF00676.20 evalue:1.8e-58 score:197.1 best_domain_score:196.7 name:E1_dh; db:Pfam-A.hmm|PF16870.5 evalue:6.4e-43 score:145.3 best_domain_score:144.6 name:OxoGdeHyase_C; db:Pfam-A.hmm|PF02779.24 evalue:1.3e-60 score:203.4 best_domain_score:202.5 name:Transket_pyr;
sprot_desc 2-oxoglutarate dehydrogenase E1 component;
sprot_id sp|C5D802|ODO1_GEOSW;
sprot_target db:uniprot_sprot|sp|C5D802|ODO1_GEOSW 7 974 evalue:3.0e-235 qcov:98.90 identity:45.40;
tigrfam_acc TIGR00239;
tigrfam_desc oxoglutarate dehydrogenase (succinyl-transferring), E1 component;
tigrfam_mainrole Energy metabolism;
tigrfam_name 2oxo_dh_E1;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR00239 evalue:0 score:1043.4 best_domain_score:1028.7 name:TIGR00239;
42478 43254 CDS
ID metaerg.pl|12063
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000028.1_279 10 237 evalue:7.6e-59 qcov:88.40 identity:52.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF02578;
pfam_desc Multi-copper polyphenol oxidoreductase laccase;
pfam_id Cu-oxidase_4;
pfam_target db:Pfam-A.hmm|PF02578.15 evalue:2.1e-45 score:154.3 best_domain_score:154.1 name:Cu-oxidase_4;
43463 45232 CDS
ID metaerg.pl|12064
allgo_ids GO:0016757;
allko_ids K00694;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000017.1_40 5 572 evalue:7.1e-129 qcov:96.40 identity:47.90;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF00535; PF13641; PF13506; PF13632;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family 21; Glycosyl transferase family group 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3; Glyco_transf_21; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:4.9e-20 score:71.2 best_domain_score:70.7 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:6.9e-29 score:100.6 best_domain_score:100.1 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13506.6 evalue:1.7e-14 score:52.9 best_domain_score:52.3 name:Glyco_transf_21; db:Pfam-A.hmm|PF13632.6 evalue:6.9e-23 score:80.8 best_domain_score:80.8 name:Glyco_trans_2_3;
sp YES;
tm_num 4;
43463 43591 signal_peptide
ID metaerg.pl|12065
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
43463 45232 transmembrane_helix
ID metaerg.pl|12066
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
topology o43490-43558i44477-44545o44573-44641i45032-45100o;
45237 46007 CDS
ID metaerg.pl|12067
allko_ids K00721; K13693;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000017.1_41 4 249 evalue:2.1e-53 qcov:96.10 identity:48.40;
kegg_pathway_id 00510;
kegg_pathway_name N-Glycan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF00535;
pfam_desc Glycosyl transferase family 2;
pfam_id Glycos_transf_2;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.1e-15 score:57.1 best_domain_score:56.7 name:Glycos_transf_2;
46793 45900 CDS
ID metaerg.pl|12068
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000057.1_38 6 274 evalue:2.3e-51 qcov:90.60 identity:43.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF00561; PF08386; PF12697; PF12146; PF06821; PF00975;
pfam_desc alpha/beta hydrolase fold; TAP-like protein; Alpha/beta hydrolase family; Serine aminopeptidase, S33; Serine hydrolase; Thioesterase domain;
pfam_id Abhydrolase_1; Abhydrolase_4; Abhydrolase_6; Hydrolase_4; Ser_hydrolase; Thioesterase;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:9.7e-20 score:70.5 best_domain_score:50.2 name:Abhydrolase_1; db:Pfam-A.hmm|PF08386.10 evalue:1.9e-05 score:23.9 best_domain_score:23.0 name:Abhydrolase_4; db:Pfam-A.hmm|PF12697.7 evalue:6e-23 score:81.8 best_domain_score:81.4 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:2.7e-15 score:55.5 best_domain_score:53.2 name:Hydrolase_4; db:Pfam-A.hmm|PF06821.13 evalue:0.00011 score:21.3 best_domain_score:13.6 name:Ser_hydrolase; db:Pfam-A.hmm|PF00975.20 evalue:1.1e-07 score:31.4 best_domain_score:30.7 name:Thioesterase;
49720 46790 CDS
ID metaerg.pl|12069
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000025.1_40 1 948 evalue:2.0e-96 qcov:97.10 identity:33.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF13514;
pfam_desc AAA domain;
pfam_id AAA_27;
pfam_target db:Pfam-A.hmm|PF13514.6 evalue:4.6e-16 score:58.3 best_domain_score:55.1 name:AAA_27;
tm_num 2;
49720 46790 transmembrane_helix
ID metaerg.pl|12070
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
topology o48116-48184i48218-48286o;
51060 49717 CDS
ID metaerg.pl|12071
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000034.1_20 1 442 evalue:2.6e-91 qcov:98.90 identity:45.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:2e-13 score:50.5 best_domain_score:49.3 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:1.2e-08 score:34.5 best_domain_score:33.6 name:Metallophos_2;
51361 56259 CDS
ID metaerg.pl|12072
allec_ids 1.4.1.2;
allgo_ids GO:0004352; GO:0019551;
allko_ids K15371;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000175.1_12 1 1630 evalue:0.0e+00 qcov:99.90 identity:59.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id GLUTAMATE-DEG1-PWY; PROPFERM-PWY;
metacyc_pathway_name L-glutamate degradation I;; L-alanine fermentation to propanoate and acetate;;
metacyc_pathway_type GLUTAMATE-DEG;; Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;;
pfam_acc PF05088;
pfam_desc Bacterial NAD-glutamate dehydrogenase;
pfam_id Bac_GDH;
pfam_target db:Pfam-A.hmm|PF05088.12 evalue:0 score:1722.2 best_domain_score:1722.0 name:Bac_GDH;
sprot_desc NAD-specific glutamate dehydrogenase;
sprot_id sp|Q9HZE0|DHE2_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HZE0|DHE2_PSEAE 30 1628 evalue:3.5e-297 qcov:98.00 identity:38.70;
56670 56296 CDS
ID metaerg.pl|12073
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
57956 56772 CDS
ID metaerg.pl|12074
allec_ids 3.6.1.40;
allgo_ids GO:0008894; GO:0015974; GO:0015970;
allko_ids K01514; K01524;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000017.1_44 1 383 evalue:2.6e-135 qcov:97.20 identity:64.00;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id PPGPPMET-PWY;
metacyc_pathway_name ppGpp biosynthesis;;
metacyc_pathway_type Metabolic-Regulators;;
pfam_acc PF01966; PF02541;
pfam_desc HD domain; Ppx/GppA phosphatase family;
pfam_id HD; Ppx-GppA;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:6.5e-13 score:48.2 best_domain_score:47.2 name:HD; db:Pfam-A.hmm|PF02541.16 evalue:7.9e-19 score:67.4 best_domain_score:66.9 name:Ppx-GppA;
sprot_desc Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase;
sprot_id sp|A0KEG8|GPPA_AERHH;
sprot_target db:uniprot_sprot|sp|A0KEG8|GPPA_AERHH 14 355 evalue:2.3e-13 qcov:86.80 identity:24.10;
58978 58325 CDS
ID metaerg.pl|12075
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
sp YES;
58325 58444 signal_peptide
ID metaerg.pl|12076
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
60889 59114 CDS
ID metaerg.pl|12077
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
sp YES;
59114 59203 lipoprotein_signal_peptide
ID metaerg.pl|12078
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
61671 61051 CDS
ID metaerg.pl|12079
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
62875 61736 CDS
ID metaerg.pl|12080
allgo_ids GO:0005515; GO:0035578; GO:0005576; GO:0061630; GO:0043312; GO:0043161; GO:0000209;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__SM23-62;g__SM23-62;s__SM23-62 sp001303955;
genomedb_acc GCA_001303955.1;
genomedb_target db:genomedb|GCA_001303955.1|KPL11896.1 43 376 evalue:4.2e-106 qcov:88.10 identity:55.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF01436; PF07494; PF08450;
pfam_desc NHL repeat; Two component regulator propeller; SMP-30/Gluconolactonase/LRE-like region;
pfam_id NHL; Reg_prop; SGL;
pfam_target db:Pfam-A.hmm|PF01436.21 evalue:5.5e-11 score:41.2 best_domain_score:23.9 name:NHL; db:Pfam-A.hmm|PF07494.11 evalue:0.00011 score:21.2 best_domain_score:8.8 name:Reg_prop; db:Pfam-A.hmm|PF08450.12 evalue:2.3e-09 score:36.5 best_domain_score:18.8 name:SGL;
sp YES;
sprot_desc NHL repeat-containing protein 3;
sprot_id sp|Q5JS37|NHLC3_HUMAN;
sprot_target db:uniprot_sprot|sp|Q5JS37|NHLC3_HUMAN 103 379 evalue:7.2e-12 qcov:73.10 identity:25.90;
61736 61804 lipoprotein_signal_peptide
ID metaerg.pl|12081
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
63172 63735 CDS
ID metaerg.pl|12082
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__UBA2329;s__UBA2329 sp002344975;
genomedb_acc GCA_002344975.1;
genomedb_target db:genomedb|GCA_002344975.1|DDUV01000027.1_82 1 183 evalue:2.8e-26 qcov:97.90 identity:38.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
sp YES;
63172 63210 lipoprotein_signal_peptide
ID metaerg.pl|12083
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
64819 63755 CDS
ID metaerg.pl|12084
allec_ids 1.14.14.5;
allgo_ids GO:0016705; GO:0055114; GO:0008726;
allko_ids K04091;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__QHWT01;s__QHWT01 sp003222675;
genomedb_acc GCA_003222675.1;
genomedb_target db:genomedb|GCA_003222675.1|PYR94277.1 1 351 evalue:6.0e-155 qcov:99.20 identity:75.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id ALKANEMONOX-PWY;
metacyc_pathway_name two-component alkanesulfonate monooxygenase;;
metacyc_pathway_type Sulfur-Metabolism;;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:1.7e-76 score:256.9 best_domain_score:256.6 name:Bac_luciferase;
sprot_desc Alkanesulfonate monooxygenase;
sprot_id sp|B7KX11|SSUD_METC4;
sprot_target db:uniprot_sprot|sp|B7KX11|SSUD_METC4 5 338 evalue:1.5e-40 qcov:94.40 identity:33.10;
65808 64816 CDS
ID metaerg.pl|12085
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__QHWT01;s__QHWT01 sp003222675;
genomedb_acc GCA_003222675.1;
genomedb_target db:genomedb|GCA_003222675.1|PYR94278.1 10 330 evalue:3.3e-131 qcov:97.30 identity:68.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF02786; PF08443;
pfam_desc Carbamoyl-phosphate synthase L chain, ATP binding domain; RimK-like ATP-grasp domain;
pfam_id CPSase_L_D2; RimK;
pfam_target db:Pfam-A.hmm|PF02786.17 evalue:9.1e-05 score:21.3 best_domain_score:17.7 name:CPSase_L_D2; db:Pfam-A.hmm|PF08443.11 evalue:2.9e-06 score:26.2 best_domain_score:23.1 name:RimK;
67393 66113 CDS
ID metaerg.pl|12086
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__UBA823;g__UBA2161;s__UBA2161 sp002328835;
genomedb_acc GCA_002328835.1;
genomedb_target db:genomedb|GCA_002328835.1|DCWN01000010.1_47 9 425 evalue:4.8e-135 qcov:97.90 identity:60.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF07687;
pfam_desc Peptidase dimerisation domain;
pfam_id M20_dimer;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:1.1e-06 score:27.8 best_domain_score:27.0 name:M20_dimer;
sp YES;
66113 66184 signal_peptide
ID metaerg.pl|12087
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
67710 70238 CDS
ID metaerg.pl|12088
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter barkolensis;
genomedb_acc GCF_002834295.1;
genomedb_target db:genomedb|GCF_002834295.1|WP_101071164.1 15 841 evalue:2.3e-274 qcov:98.20 identity:55.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF16313; PF17148; PF17162;
pfam_desc Met-zincin; Domain of unknown function (DUF5117); Domain of unknown function (DUF5118);
pfam_id DUF4953; DUF5117; DUF5118;
pfam_target db:Pfam-A.hmm|PF16313.5 evalue:3.5e-92 score:308.3 best_domain_score:307.9 name:DUF4953; db:Pfam-A.hmm|PF17148.4 evalue:2.6e-48 score:163.6 best_domain_score:163.1 name:DUF5117; db:Pfam-A.hmm|PF17162.4 evalue:1.6e-14 score:52.7 best_domain_score:51.5 name:DUF5118;
sp YES;
67710 67790 signal_peptide
ID metaerg.pl|12089
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
70706 70254 CDS
ID metaerg.pl|12090
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Algoriphagus;s__Algoriphagus ornithinivorans;
genomedb_acc GCF_900115305.1;
genomedb_target db:genomedb|GCF_900115305.1|WP_091651945.1 1 150 evalue:9.0e-44 qcov:100.00 identity:54.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF12867; PF07606;
pfam_desc DinB superfamily; Protein of unknown function (DUF1569);
pfam_id DinB_2; DUF1569;
pfam_target db:Pfam-A.hmm|PF12867.7 evalue:2.1e-05 score:24.3 best_domain_score:22.8 name:DinB_2; db:Pfam-A.hmm|PF07606.11 evalue:7.7e-07 score:28.5 best_domain_score:27.8 name:DUF1569;
71003 72214 CDS
ID metaerg.pl|12091
allec_ids 3.4.16.4;
allgo_ids GO:0005576; GO:0009002; GO:0071555; GO:0009252; GO:0008360;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000047.1_48 49 399 evalue:7.6e-98 qcov:87.10 identity:54.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id PWY-5265; PEPTIDOGLYCANSYN-PWY; PWY-6471;
metacyc_pathway_name peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00144;
pfam_desc Beta-lactamase;
pfam_id Beta-lactamase;
pfam_target db:Pfam-A.hmm|PF00144.24 evalue:5.7e-67 score:225.5 best_domain_score:225.1 name:Beta-lactamase;
sp YES;
sprot_desc D-alanyl-D-alanine carboxypeptidase;
sprot_id sp|P15555|DAC_STRSR;
sprot_target db:uniprot_sprot|sp|P15555|DAC_STRSR 14 395 evalue:1.0e-16 qcov:94.80 identity:27.80;
71003 71113 signal_peptide
ID metaerg.pl|12092
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
72322 74658 CDS
ID metaerg.pl|12093
allec_ids 3.4.21.-;
allgo_ids GO:0016787; GO:0004252;
allko_ids K01730; K01303;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__Fen-181;g__Fen-181;s__Fen-181 sp003170135;
genomedb_acc GCA_003170135.1;
genomedb_target db:genomedb|GCA_003170135.1|PMZR01000033.1_16 29 764 evalue:7.9e-285 qcov:94.60 identity:63.30;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
pfam_acc PF01738; PF00930; PF07676; PF00326;
pfam_desc Dienelactone hydrolase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; WD40-like Beta Propeller Repeat; Prolyl oligopeptidase family;
pfam_id DLH; DPPIV_N; PD40; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF01738.18 evalue:1.6e-06 score:27.1 best_domain_score:24.6 name:DLH; db:Pfam-A.hmm|PF00930.21 evalue:3.1e-05 score:22.1 best_domain_score:9.2 name:DPPIV_N; db:Pfam-A.hmm|PF07676.12 evalue:3.6e-19 score:67.4 best_domain_score:22.2 name:PD40; db:Pfam-A.hmm|PF00326.21 evalue:2.7e-42 score:143.9 best_domain_score:143.2 name:Peptidase_S9;
sp YES;
sprot_desc Uncharacterized peptidase YuxL;
sprot_id sp|P39839|YUXL_BACSU;
sprot_target db:uniprot_sprot|sp|P39839|YUXL_BACSU 113 746 evalue:1.7e-52 qcov:81.50 identity:27.40;
72322 72423 signal_peptide
ID metaerg.pl|12094
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
74708 76360 CDS
ID metaerg.pl|12095
allec_ids 3.5.1.-;
allgo_ids GO:0005737; GO:0071713; GO:0046982; GO:0046657;
allko_ids K12941;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN91042.1 15 532 evalue:2.4e-203 qcov:94.20 identity:66.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
metacyc_pathway_id PWY-6548; PWY-0; PWY-1822; PWY-5327; LYSDEGII-PWY; PWY-5784;
metacyc_pathway_name ; putrescine degradation III;; indole-3-acetate activation I;; superpathway of L-lysine degradation;; L-lysine degradation III;; indole-3-acetate inactivation VIII;;
metacyc_pathway_type ; Putrescine-Degradation;; Activation;; LYSINE-DEG; Super-Pathways;; LYSINE-DEG;; Indole-3-Acetate-Inactivation;;
pfam_acc PF07687;
pfam_desc Peptidase dimerisation domain;
pfam_id M20_dimer;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:4.8e-05 score:22.5 best_domain_score:19.7 name:M20_dimer;
sp YES;
sprot_desc p-aminobenzoyl-glutamate hydrolase subunit B;
sprot_id sp|P76052|ABGB_ECOLI;
sprot_target db:uniprot_sprot|sp|P76052|ABGB_ECOLI 57 478 evalue:2.1e-52 qcov:76.70 identity:31.30;
tigrfam_acc TIGR01891;
tigrfam_desc amidohydrolase;
tigrfam_mainrole Protein fate;
tigrfam_name amidohydrolases;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01891 evalue:5.1e-46 score:156.6 best_domain_score:156.2 name:TIGR01891;
tm_num 1;
74708 74788 signal_peptide
ID metaerg.pl|12096
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
74708 76360 transmembrane_helix
ID metaerg.pl|12097
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
topology i74726-74794o;
76852 77250 CDS
ID metaerg.pl|12098
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
77616 78209 CDS
ID metaerg.pl|12099
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0222262; 13.9048; 1.4179; 12.4647; ;
>Feature NODE_93_length_78109_cov_6.86358
3 335 CDS
ID metaerg.pl|12100
allec_ids 6.2.1.1;
allgo_ids GO:0003987; GO:0016208; GO:0005524; GO:0046872; GO:0019427;
allko_ids K01895;
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Vicinamibacteria;o__Vicinamibacterales;f__2-12-FULL-66-21;g__QHWT01;s__QHWT01 sp003222675;
genomedb_acc GCA_003222675.1;
genomedb_target db:genomedb|GCA_003222675.1|PYR90968.1 1 106 evalue:5.4e-38 qcov:96.40 identity:77.40;
kegg_pathway_id 00640; 00720; 00620; 00010;
kegg_pathway_name Propanoate metabolism; Reductive carboxylate cycle (CO2 fixation); Pyruvate metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PWY66-161; PWY66-162; PWY66-21; GLUDEG-II-PWY; ACETATEUTIL-PWY; PWY0-1313;
metacyc_pathway_name ethanol degradation III;; ethanol degradation IV;; ethanol degradation II;; L-glutamate degradation VII (to butanoate);; superpathway of acetate utilization and formation;; acetate conversion to acetyl-CoA;;
metacyc_pathway_type Ethanol-Degradation;; Ethanol-Degradation;; Ethanol-Degradation;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; CARBOXYLATES-DEG;;
pfam_acc PF13193;
pfam_desc AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF13193.6 evalue:2.3e-23 score:82.2 best_domain_score:81.8 name:AMP-binding_C;
sprot_desc Acetyl-coenzyme A synthetase;
sprot_id sp|C1AA44|ACSA_GEMAT;
sprot_target db:uniprot_sprot|sp|C1AA44|ACSA_GEMAT 1 107 evalue:1.6e-36 qcov:97.30 identity:73.80;
1163 339 CDS
ID metaerg.pl|12101
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_11 1 270 evalue:8.8e-98 qcov:98.50 identity:65.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF00132;
pfam_desc Bacterial transferase hexapeptide (six repeats);
pfam_id Hexapep;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:2e-06 score:26.5 best_domain_score:10.3 name:Hexapep;
1249 1680 CDS
ID metaerg.pl|12102
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000085.1_12 1 141 evalue:1.2e-24 qcov:98.60 identity:50.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
1848 3326 CDS
ID metaerg.pl|12103
allec_ids 1.1.1.205;
allgo_ids GO:0016491; GO:0003938; GO:0046872; GO:0000166; GO:0006177;
allko_ids K11527; K00364; K02000; K01697; K02806; K00970; K00974; K00088; K00641; K05847;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC05051.1 1 492 evalue:3.3e-212 qcov:100.00 identity:77.40;
kegg_pathway_id 02010; 02060; 00450; 00230; 00260; 00983; 00920; 00271;
kegg_pathway_name ABC transporters - General; Phosphotransferase system (PTS); Selenoamino acid metabolism; Purine metabolism; Glycine, serine and threonine metabolism; Drug metabolism - other enzymes; Sulfur metabolism; Methionine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id DENOVOPURINE2-PWY; URSIN-PWY; PWY-6125; P121-PWY; PWY-5044; PRPP-PWY; PWY-5695; PWY-841; PWY-6353;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; ureide biosynthesis;; superpathway of guanosine nucleotides de novo biosynthesis II;; adenine and adenosine salvage I;; purine nucleotides degradation I (plants);; superpathway of histidine, purine, and pyrimidine biosynthesis;; inosine 5'-phosphate degradation;; superpathway of purine nucleotides de novo biosynthesis I;; purine nucleotides degradation II (aerobic);;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Adenine-Adenosine-Salvage;; Purine-Degradation; Super-Pathways;; Super-Pathways;; Purine-Degradation;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Degradation; Super-Pathways;;
pfam_acc PF00571; PF01070; PF00478; PF03060;
pfam_desc CBS domain; FMN-dependent dehydrogenase; IMP dehydrogenase / GMP reductase domain; Nitronate monooxygenase;
pfam_id CBS; FMN_dh; IMPDH; NMO;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:1.8e-22 score:78.8 best_domain_score:41.8 name:CBS; db:Pfam-A.hmm|PF01070.18 evalue:1.3e-06 score:26.9 best_domain_score:23.6 name:FMN_dh; db:Pfam-A.hmm|PF00478.25 evalue:5.6e-156 score:518.1 best_domain_score:517.9 name:IMPDH; db:Pfam-A.hmm|PF03060.15 evalue:2.2e-10 score:39.7 best_domain_score:27.6 name:NMO;
sprot_desc Inosine-5'-monophosphate dehydrogenase;
sprot_id sp|Q9KGN8|IMDH_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KGN8|IMDH_BACHD 9 492 evalue:4.7e-165 qcov:98.40 identity:61.00;
tigrfam_acc TIGR01302;
tigrfam_desc inosine-5'-monophosphate dehydrogenase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name IMP_dehydrog;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01302 evalue:1.5e-188 score:626.4 best_domain_score:626.2 name:TIGR01302;
3498 4535 CDS
ID metaerg.pl|12104
allec_ids 2.6.1.51;
allgo_ids GO:0005777; GO:0008453; GO:0004760; GO:0019265; GO:0046487;
allko_ids K00830; K00839;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_14 1 342 evalue:1.5e-126 qcov:99.10 identity:65.70;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF00266;
pfam_desc Aminotransferase class-V;
pfam_id Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:3.5e-36 score:124.2 best_domain_score:123.9 name:Aminotran_5;
sprot_desc Serine--pyruvate aminotransferase;
sprot_id sp|Q54GT6|SPYA_DICDI;
sprot_target db:uniprot_sprot|sp|Q54GT6|SPYA_DICDI 6 342 evalue:1.3e-68 qcov:97.70 identity:39.10;
4532 6154 CDS
ID metaerg.pl|12105
allko_ids K01447; K01119; K01449; K01081; K04565; K01183; K01446; K09693; K01185; K01537; K02020; K08307; K01448;
kegg_pathway_id 02010; 05014; 00760; 00550; 00240; 00530; 00230;
kegg_pathway_name ABC transporters - General; Amyotrophic lateral sclerosis (ALS); Nicotinate and nicotinamide metabolism; Peptidoglycan biosynthesis; Pyrimidine metabolism; Aminosugars metabolism; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF01476; PF01464;
pfam_desc LysM domain; Transglycosylase SLT domain;
pfam_id LysM; SLT;
pfam_target db:Pfam-A.hmm|PF01476.20 evalue:1.6e-37 score:126.5 best_domain_score:43.2 name:LysM; db:Pfam-A.hmm|PF01464.20 evalue:1.4e-25 score:88.5 best_domain_score:87.6 name:SLT;
sp YES;
tm_num 1;
4532 4618 lipoprotein_signal_peptide
ID metaerg.pl|12106
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
4532 6154 transmembrane_helix
ID metaerg.pl|12107
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i4568-4636o;
7367 6186 CDS
ID metaerg.pl|12108
allec_ids 2.7.7.7;
allgo_ids GO:0009360; GO:0008408; GO:0003677; GO:0003887; GO:0006261;
allko_ids K02341; K02343; K02340;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_17 13 388 evalue:5.9e-95 qcov:95.70 identity:50.30;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF13177;
pfam_desc DNA polymerase III, delta subunit;
pfam_id DNA_pol3_delta2;
pfam_target db:Pfam-A.hmm|PF13177.6 evalue:7.4e-33 score:112.9 best_domain_score:112.4 name:DNA_pol3_delta2;
sprot_desc DNA polymerase III subunit delta';
sprot_id sp|P28631|HOLB_ECOLI;
sprot_target db:uniprot_sprot|sp|P28631|HOLB_ECOLI 24 389 evalue:1.8e-18 qcov:93.10 identity:26.90;
8593 7364 CDS
ID metaerg.pl|12109
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_18 4 408 evalue:5.0e-121 qcov:99.00 identity:61.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:5.2e-25 score:86.7 best_domain_score:85.8 name:Peptidase_M23;
sp YES;
7364 7426 signal_peptide
ID metaerg.pl|12110
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
9451 8597 CDS
ID metaerg.pl|12111
allgo_ids GO:0016020; GO:0016021; GO:0005886; GO:0007049; GO:0051301; GO:0070098; GO:0045881;
allko_ids K09811; K02004;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_19 1 284 evalue:3.2e-90 qcov:100.00 identity:63.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF02687; PF18075;
pfam_desc FtsX-like permease family; FtsX extracellular domain;
pfam_id FtsX; FtsX_ECD;
pfam_target db:Pfam-A.hmm|PF02687.21 evalue:7.3e-06 score:25.6 best_domain_score:25.6 name:FtsX; db:Pfam-A.hmm|PF18075.1 evalue:9.1e-17 score:60.7 best_domain_score:60.3 name:FtsX_ECD;
sprot_desc Cell division protein FtsX;
sprot_id sp|Q81X30|FTSX_BACAN;
sprot_target db:uniprot_sprot|sp|Q81X30|FTSX_BACAN 4 282 evalue:4.4e-22 qcov:98.20 identity:29.90;
tm_num 4;
9451 8597 transmembrane_helix
ID metaerg.pl|12112
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i8642-8710o9110-9178i9257-9325o9368-9427i;
9903 9454 CDS
ID metaerg.pl|12113
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0007049; GO:0051301;
allko_ids K02071; K06861; K01996; K11072; K02068; K02045; K02010; K05847; K02006; K02052; K02017; K09812; K02023; K11962; K02000; K01995; K02049; K10111; K01998; K05816;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_20 2 138 evalue:1.1e-49 qcov:91.90 identity:76.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF00005;
pfam_desc ABC transporter;
pfam_id ABC_tran;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:3.4e-14 score:52.8 best_domain_score:52.3 name:ABC_tran;
sprot_desc Cell division ATP-binding protein FtsE;
sprot_id sp|A5U7B7|FTSE_MYCTA;
sprot_target db:uniprot_sprot|sp|A5U7B7|FTSE_MYCTA 2 137 evalue:3.9e-30 qcov:91.30 identity:55.90;
11203 10238 CDS
ID metaerg.pl|12114
allec_ids 1.1.1.262;
allgo_ids GO:0051287; GO:0055114; GO:0005737; GO:0050570; GO:0050897; GO:0000287; GO:0008270; GO:0042823; GO:0008615;
allko_ids K00097;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC05058.1 1 305 evalue:2.9e-84 qcov:95.00 identity:56.70;
kegg_pathway_id 00750;
kegg_pathway_name Vitamin B6 metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PYRIDOXSYN-PWY; PWY0-845;
metacyc_pathway_name pyridoxal 5'-phosphate biosynthesis I;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;;
metacyc_pathway_type Vitamin-B6-Biosynthesis;; Super-Pathways; Vitamin-B6-Biosynthesis;;
pfam_acc PF04166;
pfam_desc Pyridoxal phosphate biosynthetic protein PdxA;
pfam_id PdxA;
pfam_target db:Pfam-A.hmm|PF04166.12 evalue:1.1e-89 score:299.8 best_domain_score:299.6 name:PdxA;
sprot_desc 4-hydroxythreonine-4-phosphate dehydrogenase;
sprot_id sp|A7ZHE5|PDXA_ECO24;
sprot_target db:uniprot_sprot|sp|A7ZHE5|PDXA_ECO24 1 305 evalue:7.8e-60 qcov:95.00 identity:41.80;
tigrfam_acc TIGR00557;
tigrfam_desc 4-hydroxythreonine-4-phosphate dehydrogenase PdxA;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name pdxA;
tigrfam_sub1role Pyridoxine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00557 evalue:1.8e-97 score:325.8 best_domain_score:318.7 name:TIGR00557;
12612 11251 CDS
ID metaerg.pl|12115
allgo_ids GO:0003755;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_22 41 453 evalue:8.0e-80 qcov:91.20 identity:42.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF00639; PF13145; PF13616; PF09312; PF13623; PF13624;
pfam_desc PPIC-type PPIASE domain; PPIC-type PPIASE domain; PPIC-type PPIASE domain; SurA N-terminal domain; SurA N-terminal domain; SurA N-terminal domain;
pfam_id Rotamase; Rotamase_2; Rotamase_3; SurA_N; SurA_N_2; SurA_N_3;
pfam_target db:Pfam-A.hmm|PF00639.21 evalue:1.8e-31 score:108.2 best_domain_score:88.5 name:Rotamase; db:Pfam-A.hmm|PF13145.6 evalue:1.5e-19 score:70.2 best_domain_score:52.9 name:Rotamase_2; db:Pfam-A.hmm|PF13616.6 evalue:3.9e-29 score:100.8 best_domain_score:87.0 name:Rotamase_3; db:Pfam-A.hmm|PF09312.11 evalue:3.9e-15 score:55.2 best_domain_score:54.1 name:SurA_N; db:Pfam-A.hmm|PF13623.6 evalue:5.3e-08 score:32.1 best_domain_score:29.2 name:SurA_N_2; db:Pfam-A.hmm|PF13624.6 evalue:1.7e-11 score:43.4 best_domain_score:42.4 name:SurA_N_3;
sp YES;
tm_num 1;
11251 11325 signal_peptide
ID metaerg.pl|12116
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
12612 11251 transmembrane_helix
ID metaerg.pl|12117
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i11269-11322o;
14173 12716 CDS
ID metaerg.pl|12118
allgo_ids GO:0003755;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_23 13 470 evalue:4.9e-91 qcov:94.40 identity:44.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF00639; PF13145; PF13616;
pfam_desc PPIC-type PPIASE domain; PPIC-type PPIASE domain; PPIC-type PPIASE domain;
pfam_id Rotamase; Rotamase_2; Rotamase_3;
pfam_target db:Pfam-A.hmm|PF00639.21 evalue:1.2e-30 score:105.5 best_domain_score:101.3 name:Rotamase; db:Pfam-A.hmm|PF13145.6 evalue:1.7e-12 score:47.4 best_domain_score:46.0 name:Rotamase_2; db:Pfam-A.hmm|PF13616.6 evalue:2.2e-31 score:108.0 best_domain_score:105.6 name:Rotamase_3;
sp YES;
12716 12769 lipoprotein_signal_peptide
ID metaerg.pl|12119
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
17582 14232 CDS
ID metaerg.pl|12120
allec_ids 3.6.4.-; 3.6.1.-;
allgo_ids GO:0003676; GO:0005524; GO:0005737; GO:0003684; GO:0004386; GO:0006355; GO:0000716;
allko_ids K10896; K03723;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_24 21 1116 evalue:0.0e+00 qcov:98.20 identity:61.40;
kegg_pathway_id 03420;
kegg_pathway_name Nucleotide excision repair;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PWY-6502; PWY-6147; FOLSYN-PWY; PWY-6383; ALL-CHORISMATE-PWY; PWY-6404; PWY-5354;
metacyc_pathway_name oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; superpathway of tetrahydrofolate biosynthesis and salvage;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of chorismate metabolism;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ;
metacyc_pathway_type Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; ;
pfam_acc PF02559; PF00270; PF00271; PF04851; PF03461; PF17757;
pfam_desc CarD-like/TRCF domain; DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TRCF domain; UvrB interaction domain;
pfam_id CarD_CdnL_TRCF; DEAD; Helicase_C; ResIII; TRCF; UvrB_inter;
pfam_target db:Pfam-A.hmm|PF02559.16 evalue:2e-21 score:75.7 best_domain_score:74.5 name:CarD_CdnL_TRCF; db:Pfam-A.hmm|PF00270.29 evalue:2.4e-16 score:59.3 best_domain_score:58.1 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:4.7e-16 score:58.4 best_domain_score:48.8 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:4.6e-08 score:32.5 best_domain_score:31.4 name:ResIII; db:Pfam-A.hmm|PF03461.15 evalue:1e-24 score:86.0 best_domain_score:83.8 name:TRCF; db:Pfam-A.hmm|PF17757.1 evalue:6.7e-20 score:70.3 best_domain_score:68.7 name:UvrB_inter;
sprot_desc Transcription-repair-coupling factor;
sprot_id sp|P37474|MFD_BACSU;
sprot_target db:uniprot_sprot|sp|P37474|MFD_BACSU 31 1109 evalue:8.7e-199 qcov:96.70 identity:36.10;
tigrfam_acc TIGR00580;
tigrfam_desc transcription-repair coupling factor;
tigrfam_mainrole DNA metabolism;
tigrfam_name mfd;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00580 evalue:3.7e-294 score:977.8 best_domain_score:908.9 name:TIGR00580;
19683 17674 CDS
ID metaerg.pl|12121
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_25 1 657 evalue:1.5e-77 qcov:98.20 identity:37.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF07584;
pfam_desc Aerotolerance regulator N-terminal;
pfam_id BatA;
pfam_target db:Pfam-A.hmm|PF07584.11 evalue:2.5e-14 score:52.6 best_domain_score:52.6 name:BatA;
tigrfam_acc TIGR02226;
tigrfam_desc N-terminal double-transmembrane domain;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name two_anch;
tigrfam_sub1role Domain;
tigrfam_target db:TIGRFAMs.hmm|TIGR02226 evalue:1.3e-16 score:59.7 best_domain_score:58.3 name:TIGR02226;
tm_num 2;
19683 17674 transmembrane_helix
ID metaerg.pl|12122
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology o17686-17745i17839-17907o;
20620 19688 CDS
ID metaerg.pl|12123
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC05064.1 17 309 evalue:9.4e-96 qcov:94.50 identity:59.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF01882; PF13519;
pfam_desc Protein of unknown function DUF58; von Willebrand factor type A domain;
pfam_id DUF58; VWA_2;
pfam_target db:Pfam-A.hmm|PF01882.18 evalue:1.2e-16 score:60.0 best_domain_score:58.9 name:DUF58; db:Pfam-A.hmm|PF13519.6 evalue:1.3e-06 score:28.2 best_domain_score:27.2 name:VWA_2;
21694 20633 CDS
ID metaerg.pl|12124
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000003.1_92 18 351 evalue:1.4e-55 qcov:94.60 identity:36.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
sp YES;
tm_num 1;
20633 20728 signal_peptide
ID metaerg.pl|12125
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
21694 20633 transmembrane_helix
ID metaerg.pl|12126
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i20669-20728o;
21829 23715 CDS
ID metaerg.pl|12127
allec_ids 3.6.5.n1; 3.6.5.-;
allgo_ids GO:0003924; GO:0005525; GO:0005886; GO:0043022; GO:0003746; GO:0045727;
allko_ids K03018; K00955; K00956; K00860; K03596;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_28 30 626 evalue:1.0e-274 qcov:95.10 identity:78.70;
kegg_pathway_id 00230; 03020; 00450; 00920;
kegg_pathway_name Purine metabolism; RNA polymerase; Selenoamino acid metabolism; Sulfur metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF00679; PF00009; PF03144; PF06421; PF01926;
pfam_desc Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor Tu domain 2; GTP-binding protein LepA C-terminus; 50S ribosome-binding GTPase;
pfam_id EFG_C; GTP_EFTU; GTP_EFTU_D2; LepA_C; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00679.24 evalue:1.1e-21 score:75.9 best_domain_score:75.0 name:EFG_C; db:Pfam-A.hmm|PF00009.27 evalue:8.7e-54 score:181.2 best_domain_score:180.7 name:GTP_EFTU; db:Pfam-A.hmm|PF03144.25 evalue:7.7e-09 score:35.1 best_domain_score:33.5 name:GTP_EFTU_D2; db:Pfam-A.hmm|PF06421.12 evalue:2.5e-51 score:171.6 best_domain_score:171.0 name:LepA_C; db:Pfam-A.hmm|PF01926.23 evalue:2.7e-05 score:23.4 best_domain_score:22.3 name:MMR_HSR1;
sprot_desc Elongation factor 4;
sprot_id sp|Q5KWZ3|LEPA_GEOKA;
sprot_target db:uniprot_sprot|sp|Q5KWZ3|LEPA_GEOKA 31 628 evalue:5.9e-221 qcov:95.20 identity:61.70;
tigrfam_acc TIGR00231; TIGR01393;
tigrfam_desc small GTP-binding protein domain; elongation factor 4;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name small_GTP; lepA;
tigrfam_sub1role General; General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:1.4e-20 score:72.8 best_domain_score:71.8 name:TIGR00231; db:TIGRFAMs.hmm|TIGR01393 evalue:8.8e-286 score:948.1 best_domain_score:947.9 name:TIGR01393;
23708 24742 CDS
ID metaerg.pl|12128
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_31 13 338 evalue:7.2e-97 qcov:94.80 identity:58.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF00294;
pfam_desc pfkB family carbohydrate kinase;
pfam_id PfkB;
pfam_target db:Pfam-A.hmm|PF00294.24 evalue:1.9e-09 score:36.5 best_domain_score:34.0 name:PfkB;
24739 25635 CDS
ID metaerg.pl|12129
allko_ids K01768;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000003.1_88 1 297 evalue:4.9e-102 qcov:99.70 identity:63.40;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
25632 26297 CDS
ID metaerg.pl|12130
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000002.1_218 7 194 evalue:2.3e-32 qcov:85.10 identity:46.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
26294 27526 CDS
ID metaerg.pl|12131
allec_ids 2.5.1.48;
allgo_ids GO:0030170; GO:0009507; GO:0009570; GO:0003962; GO:0009086; GO:0001887;
allko_ids K01739;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_34 24 406 evalue:3.3e-125 qcov:93.40 identity:60.60;
kegg_pathway_id 00920; 00271; 00450; 00272;
kegg_pathway_name Sulfur metabolism; Methionine metabolism; Selenoamino acid metabolism; Cysteine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id P4-PWY; HOMOSER-METSYN-PWY; PWY-5347; METSYN-PWY; PWY0-781; MET-SAM-PWY;
metacyc_pathway_name superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; L-methionine biosynthesis I;; superpathway of L-methionine biosynthesis (transsulfuration);; superpathway of L-homoserine and L-methionine biosynthesis;; aspartate superpathway;; superpathway of S-adenosyl-L-methionine biosynthesis;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Super-Pathways;;
pfam_acc PF01053;
pfam_desc Cys/Met metabolism PLP-dependent enzyme;
pfam_id Cys_Met_Meta_PP;
pfam_target db:Pfam-A.hmm|PF01053.20 evalue:2.8e-111 score:371.0 best_domain_score:370.8 name:Cys_Met_Meta_PP;
sprot_desc Cystathionine gamma-synthase 1, chloroplastic;
sprot_id sp|P55217|CGS1_ARATH;
sprot_target db:uniprot_sprot|sp|P55217|CGS1_ARATH 29 404 evalue:1.2e-68 qcov:91.70 identity:38.40;
27643 27873 CDS
ID metaerg.pl|12132
allgo_ids GO:0005506; GO:0016226; GO:0051536; GO:0009399;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD49891.1 2 76 evalue:2.1e-20 qcov:98.70 identity:64.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF01106;
pfam_desc NifU-like domain;
pfam_id NifU;
pfam_target db:Pfam-A.hmm|PF01106.17 evalue:1.5e-26 score:91.5 best_domain_score:91.4 name:NifU;
sprot_desc Putative nitrogen fixation protein YutI;
sprot_id sp|O32119|YUTI_BACSU;
sprot_target db:uniprot_sprot|sp|O32119|YUTI_BACSU 4 73 evalue:1.7e-13 qcov:92.10 identity:54.30;
27991 29112 CDS
ID metaerg.pl|12133
allgo_ids GO:0005524; GO:0016491; GO:0055114; GO:0051539; GO:0016887; GO:0046872; GO:0016226;
allko_ids K03593;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000003.1_81 1 370 evalue:3.5e-137 qcov:99.20 identity:70.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF13614; PF01656; PF00142; PF01883; PF09140; PF10609;
pfam_desc AAA domain; CobQ/CobB/MinD/ParA nucleotide binding domain; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; Iron-sulfur cluster assembly protein; ATPase MipZ; NUBPL iron-transfer P-loop NTPase;
pfam_id AAA_31; CbiA; Fer4_NifH; FeS_assembly_P; MipZ; ParA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:4e-08 score:32.6 best_domain_score:29.1 name:AAA_31; db:Pfam-A.hmm|PF01656.23 evalue:7e-17 score:60.9 best_domain_score:60.0 name:CbiA; db:Pfam-A.hmm|PF00142.18 evalue:8.2e-08 score:31.2 best_domain_score:16.0 name:Fer4_NifH; db:Pfam-A.hmm|PF01883.19 evalue:1.1e-12 score:47.2 best_domain_score:46.2 name:FeS_assembly_P; db:Pfam-A.hmm|PF09140.11 evalue:3.3e-06 score:25.8 best_domain_score:25.1 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:1.1e-96 score:322.3 best_domain_score:322.0 name:ParA;
sprot_desc Iron-sulfur cluster carrier protein;
sprot_id sp|P53383|APBC_SYNY3;
sprot_target db:uniprot_sprot|sp|P53383|APBC_SYNY3 9 360 evalue:5.0e-66 qcov:94.40 identity:39.90;
29115 29333 CDS
ID metaerg.pl|12134
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
29336 30103 CDS
ID metaerg.pl|12135
allec_ids 2.5.1.-;
allgo_ids GO:0016740;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90793.1 4 252 evalue:4.7e-61 qcov:97.60 identity:51.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PWY-5893; PWY-5027; PWY-6383; PWY-6129; PWY-5133; PWY-5864; PWY-6403; PWY-5817; PWY-5134; PWY-6520; PWY-5899; PWY-5838; PWY-4502; PWY-5064; PWY-5806; PWY-6404; PWY-5135; PWY-5140; PWY-5701; PWY-5068; PWY-2681; PWY-5896; PWY-5845; PWY-5862; PWY-5816; PWY-5863; PWY-5898; PWY-6263; PWY-5132; PWY-5897; PWY-5808; POLYISOPRENSYN-PWY; PWY-5805; PWY-5783; PWY-724; PWY-5861; PWY-6262;
metacyc_pathway_name tridecaprenyl diphosphate biosynthesis;; phylloquinol biosynthesis;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; dolichol and dolichyl phosphate biosynthesis;; colupulone and cohumulone biosynthesis;; superpathway of plastoquinol biosynthesis;; carrageenan biosynthesis;; dodecaprenyl diphosphate biosynthesis;; superpathway of bitter acids biosynthesis;; nonaprenyl diphosphate biosynthesis II;; superpathway of menaquinol-13 biosynthesis;; superpathway of menaquinol-8 biosynthesis I;; wighteone and luteone biosynthesis;; chlorophyll a biosynthesis II;; all-trans-decaprenyl diphosphate biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; xanthohumol biosynthesis;; cannabinoid biosynthesis;; shikonin biosynthesis;; chlorophyll cycle;; trans-zeatin biosynthesis;; superpathway of menaquinol-10 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of demethylmenaquinol-9 biosynthesis;; all trans undecaprenyl diphosphate biosynthesis;; superpathway of phylloquinol biosynthesis;; superpathway of menaquinol-12 biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; lupulone and humulone biosynthesis;; superpathway of menaquinol-11 biosynthesis;; hyperforin and adhyperforin biosynthesis;; polyisoprenoid biosynthesis (E. coli);; nonaprenyl diphosphate biosynthesis I;; octaprenyl diphosphate biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; superpathway of demethylmenaquinol-8 biosynthesis I;; demethylmenaquinol-8 biosynthesis II;;
metacyc_pathway_type Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Vitamin-Biosynthesis;; Polyprenyl-Biosynthesis;; Lipid-Biosynthesis;; TERPENOPHENOLICS-SYN;; Plastoquinone-Biosynthesis; Super-Pathways;; Polysaccharides-Biosynthesis;; Polyprenyl-Biosynthesis;; Metabolic-Clusters; Super-Pathways; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; ISOFLAVONOID-PHYTOALEXINS; ISOFLAVONOID-SYN;; Chlorophyll-a-Biosynthesis;; Polyprenyl-Biosynthesis;; Cell-Wall-Biosynthesis; Super-Pathways;; PRENYLFLAVONOID-SYN;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Chlorophyll-a-Biosynthesis;; CYTOKININ-BIOSYNTHESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Demethylmenaquinone-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Menaquinone-Biosynthesis; Super-Pathways;; TERPENOPHENOLICS-SYN;; Polyprenyl-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis;; Polyprenyl-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis; Super-Pathways;; Demethylmenaquinol-8-Biosynthesis;;
pfam_acc PF01887;
pfam_desc S-adenosyl-l-methionine hydroxide adenosyltransferase;
pfam_id SAM_adeno_trans;
pfam_target db:Pfam-A.hmm|PF01887.16 evalue:2e-70 score:236.1 best_domain_score:235.9 name:SAM_adeno_trans;
sprot_desc Chlorinase MJ1651;
sprot_id sp|Q59045|SALL_METJA;
sprot_target db:uniprot_sprot|sp|Q59045|SALL_METJA 4 187 evalue:1.8e-22 qcov:72.20 identity:34.90;
30377 30135 CDS
ID metaerg.pl|12136
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV24958.1 1 77 evalue:1.1e-08 qcov:96.20 identity:54.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
tm_num 2;
30377 30135 transmembrane_helix
ID metaerg.pl|12137
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i30153-30221o30234-30302i;
31260 30409 CDS
ID metaerg.pl|12138
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_39 18 279 evalue:4.0e-53 qcov:92.60 identity:43.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF17115;
pfam_desc N-terminal domain of toast_rack, DUF2154;
pfam_id Toast_rack_N;
pfam_target db:Pfam-A.hmm|PF17115.5 evalue:8.5e-07 score:28.4 best_domain_score:26.5 name:Toast_rack_N;
sp YES;
30409 30468 signal_peptide
ID metaerg.pl|12139
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
32963 31257 CDS
ID metaerg.pl|12140
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_40 21 509 evalue:1.4e-65 qcov:86.10 identity:36.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
sp YES;
tm_num 5;
31257 31361 signal_peptide
ID metaerg.pl|12141
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
32963 31257 transmembrane_helix
ID metaerg.pl|12142
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology o32187-32255i32310-32378o32406-32474i32556-32624o32652-32720i;
33909 32947 CDS
ID metaerg.pl|12143
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF13490;
pfam_desc Putative zinc-finger;
pfam_id zf-HC2;
pfam_target db:Pfam-A.hmm|PF13490.6 evalue:2.4e-10 score:39.7 best_domain_score:23.2 name:zf-HC2;
tm_num 3;
33909 32947 transmembrane_helix
ID metaerg.pl|12144
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology o33562-33630i33691-33759o33787-33855i;
34576 33986 CDS
ID metaerg.pl|12145
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0003677; GO:0016987;
allko_ids K03088;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000003.1_5 1 196 evalue:4.6e-72 qcov:100.00 identity:70.40;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF04542; PF04545; PF08281;
pfam_desc Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF04542.14 evalue:8.3e-20 score:69.6 best_domain_score:68.6 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:2.1e-10 score:39.2 best_domain_score:34.5 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:8.4e-18 score:63.0 best_domain_score:62.2 name:Sigma70_r4_2;
sprot_desc ECF RNA polymerase sigma factor SigW;
sprot_id sp|Q45585|SIGW_BACSU;
sprot_target db:uniprot_sprot|sp|Q45585|SIGW_BACSU 17 194 evalue:4.8e-28 qcov:90.80 identity:38.80;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:8.5e-35 score:119.0 best_domain_score:118.8 name:TIGR02937;
34808 35536 CDS
ID metaerg.pl|12146
allec_ids 2.1.1.163; 2.1.1.-;
allgo_ids GO:0008168; GO:0102955; GO:0009234;
allko_ids K00599; K03183;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD49380.1 1 242 evalue:1.6e-90 qcov:100.00 identity:69.00;
kegg_pathway_id 00350; 00130; 00380; 00150; 00340; 00450; 00626;
kegg_pathway_name Tyrosine metabolism; Ubiquinone biosynthesis; Tryptophan metabolism; Androgen and estrogen metabolism; Histidine metabolism; Selenoamino acid metabolism; Naphthalene and anthracene degradation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PWY-6303; PWY-5857; PWY-5844; PWY-6151; PWY-5855; PWY-5209; PWY-6154; PWY-6424; UBISYN-PWY; MENAQUINONESYN-PWY; PWY-6142; PWY-5856; PWY-5897; PWY-6263; METH-ACETATE-PWY; PWY-6519; PWY-5849; PWY-5773; PWY-5328; PWY-5898; METHIONINE-DEG1-PWY; PWY-5116; PWY-1581; CO2FORM-PWY; PWY-5896; PWY-5891; PWY-5845; PWY-6292; PWY-5987; PWY-5479; PWY-6395; PWY-6427; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5840; PWY-5135; CODH-PWY; PWY-5899; PWY-6442; PWY-6575; PWY-5850; PWY-5838; PWY-6477; PWY-5467; PWY-5839; PWY-6153; PWY-5892; ALL-CHORISMATE-PWY; PWY-3542; PWY-4021; PWY-5041; PWY-5895; PWY-5864; PWY-5975; PWY-5876; PWY-1061; PWY-5890; PWY-1422; PWY-5729; PWY-6113; PWY-5305; PWYG-321;
metacyc_pathway_name methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; menaquinol-9 biosynthesis;; S-adenosyl-L-methionine cycle I;; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; autoinducer AI-2 biosynthesis II (Vibrio);; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; menaquinol-8 biosynthesis;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);; superpathway of menaquinol-11 biosynthesis;; superpathway of menaquinol-8 biosynthesis II;; methanogenesis from acetate;; 8-amino-7-oxononanoate biosynthesis I;; menaquinol-6 biosynthesis;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; superpathway of menaquinol-12 biosynthesis;; L-methionine degradation I (to L-homocysteine);; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; superpathway of menaquinol-10 biosynthesis;; menaquinol-11 biosynthesis;; superpathway of menaquinol-9 biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of seleno-compound metabolism;; rot-2'-enonate biosynthesis;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; superpathway of menaquinol-7 biosynthesis;; xanthohumol biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; superpathway of menaquinol-13 biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; superpathway of menaquinol-6 biosynthesis I;; superpathway of menaquinol-8 biosynthesis I;; gibberellin inactivation II (methylation);; gramine biosynthesis;; menaquinol-7 biosynthesis;; autoinducer AI-2 biosynthesis I;; menaquinol-12 biosynthesis;; superpathway of chorismate metabolism;; choline biosynthesis II;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; menaquinol-13 biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; magnoflorine biosynthesis;; homogalacturonan biosynthesis;; menaquinol-10 biosynthesis;; vitamin E biosynthesis (tocopherols);; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; Menaquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Autoinducer-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;; Menaquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; METHANOGENESIS;; 7-Keto-8-aminopelargonate-Biosynthesis;; Menaquinone-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; METHIONINE-DEG;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; QUINONE-SYN;; LIGNAN-SYN;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Rotenoids-Biosynthesis;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; PRENYLFLAVONOID-SYN;; Autotrophic-CO2-Fixation;; Menaquinone-Biosynthesis; Super-Pathways;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Menaquinone-Biosynthesis; Super-Pathways;; Menaquinone-Biosynthesis; Super-Pathways;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; Menaquinone-Biosynthesis;; Autoinducer-Biosynthesis;; Menaquinone-Biosynthesis;; Super-Pathways;; Choline-Biosynthesis;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Menaquinone-Biosynthesis;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; Menaquinone-Biosynthesis;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;;
pfam_acc PF08241; PF13649; PF01209;
pfam_desc Methyltransferase domain; Methyltransferase domain; ubiE/COQ5 methyltransferase family;
pfam_id Methyltransf_11; Methyltransf_25; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:8.7e-13 score:48.0 best_domain_score:47.3 name:Methyltransf_11; db:Pfam-A.hmm|PF13649.6 evalue:1.9e-14 score:53.4 best_domain_score:52.7 name:Methyltransf_25; db:Pfam-A.hmm|PF01209.18 evalue:1.1e-60 score:204.1 best_domain_score:203.9 name:Ubie_methyltran;
sprot_desc Demethylmenaquinone methyltransferase;
sprot_id sp|A1UAY5|MENG_MYCSK;
sprot_target db:uniprot_sprot|sp|A1UAY5|MENG_MYCSK 18 242 evalue:2.8e-41 qcov:93.00 identity:43.10;
tigrfam_acc TIGR01934;
tigrfam_desc ubiquinone/menaquinone biosynthesis methyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name MenG_MenH_UbiE;
tigrfam_sub1role Menaquinone and ubiquinone;
tigrfam_target db:TIGRFAMs.hmm|TIGR01934 evalue:1.6e-66 score:223.0 best_domain_score:222.8 name:TIGR01934;
36415 35585 CDS
ID metaerg.pl|12147
allec_ids 3.2.2.23;
allgo_ids GO:0003684; GO:0003906; GO:0006284; GO:0008270; GO:0016799; GO:0140078; GO:0008534; GO:0006289;
allko_ids K05522; K10563;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD49377.1 1 274 evalue:3.8e-72 qcov:99.30 identity:54.00;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF01149; PF06831; PF06827;
pfam_desc Formamidopyrimidine-DNA glycosylase N-terminal domain; Formamidopyrimidine-DNA glycosylase H2TH domain; Zinc finger found in FPG and IleRS;
pfam_id Fapy_DNA_glyco; H2TH; zf-FPG_IleRS;
pfam_target db:Pfam-A.hmm|PF01149.24 evalue:4.8e-27 score:94.1 best_domain_score:93.3 name:Fapy_DNA_glyco; db:Pfam-A.hmm|PF06831.14 evalue:8.8e-25 score:85.8 best_domain_score:85.2 name:H2TH; db:Pfam-A.hmm|PF06827.14 evalue:3.1e-12 score:45.3 best_domain_score:44.5 name:zf-FPG_IleRS;
sprot_desc Formamidopyrimidine-DNA glycosylase;
sprot_id sp|Q67R59|FPG_SYMTH;
sprot_target db:uniprot_sprot|sp|Q67R59|FPG_SYMTH 1 276 evalue:1.1e-51 qcov:100.00 identity:45.50;
tigrfam_acc TIGR00577;
tigrfam_desc DNA-formamidopyrimidine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name fpg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00577 evalue:2.8e-79 score:265.4 best_domain_score:265.3 name:TIGR00577;
37736 36444 CDS
ID metaerg.pl|12148
allec_ids 6.3.4.13;
allgo_ids GO:0005524; GO:0046872; GO:0004637; GO:0006189; GO:0009113;
allko_ids K11175; K01945; K01952; K13713; K11788; K01923; K01933; K11787;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000003.1_73 1 420 evalue:2.6e-144 qcov:97.70 identity:60.00;
kegg_pathway_id 00230; 00670;
kegg_pathway_name Purine metabolism; One carbon pool by folate;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PWY-6121; DENOVOPURINE2-PWY; PWY-6122; PRPP-PWY; PWY-841; PWY-6277;
metacyc_pathway_name 5-aminoimidazole ribonucleotide biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;;
metacyc_pathway_type AIR-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;;
pfam_acc PF02222; PF02655; PF02786; PF01071; PF02843; PF02844;
pfam_desc ATP-grasp domain; ATP-grasp domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; Phosphoribosylglycinamide synthetase, N domain;
pfam_id ATP-grasp; ATP-grasp_3; CPSase_L_D2; GARS_A; GARS_C; GARS_N;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:1.7e-06 score:26.9 best_domain_score:26.3 name:ATP-grasp; db:Pfam-A.hmm|PF02655.14 evalue:1.4e-05 score:24.4 best_domain_score:23.4 name:ATP-grasp_3; db:Pfam-A.hmm|PF02786.17 evalue:6.4e-07 score:28.3 best_domain_score:27.7 name:CPSase_L_D2; db:Pfam-A.hmm|PF01071.19 evalue:2.5e-78 score:261.6 best_domain_score:261.1 name:GARS_A; db:Pfam-A.hmm|PF02843.16 evalue:5.1e-25 score:86.8 best_domain_score:84.9 name:GARS_C; db:Pfam-A.hmm|PF02844.15 evalue:7.8e-28 score:96.3 best_domain_score:95.0 name:GARS_N;
sprot_desc Phosphoribosylamine--glycine ligase;
sprot_id sp|Q92RL0|PUR2_RHIME;
sprot_target db:uniprot_sprot|sp|Q92RL0|PUR2_RHIME 1 427 evalue:2.4e-104 qcov:99.30 identity:45.40;
tigrfam_acc TIGR00877;
tigrfam_desc phosphoribosylamine--glycine ligase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purD;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00877 evalue:2.1e-149 score:497.1 best_domain_score:496.9 name:TIGR00877;
38690 37812 CDS
ID metaerg.pl|12149
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.1e-13 score:51.2 best_domain_score:40.6 name:Usp;
39972 38875 CDS
ID metaerg.pl|12150
allgo_ids GO:0004222; GO:0006508;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000076.1_50 34 349 evalue:1.8e-122 qcov:86.60 identity:70.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:2.1e-21 score:75.9 best_domain_score:71.1 name:Peptidase_M48;
41246 40083 CDS
ID metaerg.pl|12151
allec_ids 4.4.1.1;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0016846; GO:0004123; GO:0003962; GO:0047982; GO:0080146; GO:0044540; GO:0019343; GO:0043418; GO:0008284; GO:0019346;
allko_ids K01760; K01758; K01739; K17217;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90810.1 11 387 evalue:2.4e-157 qcov:97.40 identity:72.20;
kegg_pathway_id 00260; 00272; 00910; 00450; 00271; 00920;
kegg_pathway_name Glycine, serine and threonine metabolism; Cysteine metabolism; Nitrogen metabolism; Selenoamino acid metabolism; Methionine metabolism; Sulfur metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PWY-821; PWY-6292; PWY-5328; PWY-6293; HOMOCYSDEGR-PWY; LCYSDEG-PWY; PWY-801;
metacyc_pathway_name superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae);; superpathway of L-cysteine biosynthesis (mammalian);; superpathway of L-methionine salvage and degradation;; superpathway of L-cysteine biosynthesis (fungi);; L-cysteine biosynthesis III (from L-homocysteine);; L-cysteine degradation II;; homocysteine and cysteine interconversion;;
metacyc_pathway_type Amino-Acid-Biosynthesis; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; METHIONINE-DEG; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; CYSTEINE-SYN; HOMOCYSTEINE-DEG;; CYSTEINE-DEG;; CYSTEINE-SYN; Interconversion;;
pfam_acc PF00155; PF00266; PF01053; PF01041;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V; Cys/Met metabolism PLP-dependent enzyme; DegT/DnrJ/EryC1/StrS aminotransferase family;
pfam_id Aminotran_1_2; Aminotran_5; Cys_Met_Meta_PP; DegT_DnrJ_EryC1;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1.8e-06 score:26.6 best_domain_score:26.2 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:6.2e-06 score:24.6 best_domain_score:24.1 name:Aminotran_5; db:Pfam-A.hmm|PF01053.20 evalue:3.7e-149 score:495.6 best_domain_score:495.5 name:Cys_Met_Meta_PP; db:Pfam-A.hmm|PF01041.17 evalue:8.4e-12 score:44.3 best_domain_score:43.0 name:DegT_DnrJ_EryC1;
sprot_desc Cystathionine gamma-lyase;
sprot_id sp|O05394|MCCB_BACSU;
sprot_target db:uniprot_sprot|sp|O05394|MCCB_BACSU 13 387 evalue:2.0e-118 qcov:96.90 identity:54.10;
41403 42782 CDS
ID metaerg.pl|12152
allec_ids 5.4.2.10;
allgo_ids GO:0005975; GO:0016868; GO:0000287; GO:0008966;
allko_ids K03431; K00966; K01842; K01835; K01840;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000002.1_194 1 459 evalue:1.5e-158 qcov:100.00 identity:64.90;
kegg_pathway_id 00052; 00521; 00530; 00500; 00010; 00051; 00030;
kegg_pathway_name Galactose metabolism; Streptomycin biosynthesis; Aminosugars metabolism; Starch and sucrose metabolism; Glycolysis / Gluconeogenesis; Fructose and mannose metabolism; Pentose phosphate pathway;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PWY-6404; UDPNAGSYN-PWY; OANTIGEN-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; UDP-N-acetyl-D-glucosamine biosynthesis I;; O-antigen building blocks biosynthesis (E. coli);;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; UDP-NAc-Glucosamine-Biosynthesis;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;;
pfam_acc PF02878; PF02879; PF02880; PF00408;
pfam_desc Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain;
pfam_id PGM_PMM_I; PGM_PMM_II; PGM_PMM_III; PGM_PMM_IV;
pfam_target db:Pfam-A.hmm|PF02878.16 evalue:2.5e-31 score:107.5 best_domain_score:106.6 name:PGM_PMM_I; db:Pfam-A.hmm|PF02879.16 evalue:4.6e-22 score:77.8 best_domain_score:76.6 name:PGM_PMM_II; db:Pfam-A.hmm|PF02880.16 evalue:2.1e-22 score:78.7 best_domain_score:72.4 name:PGM_PMM_III; db:Pfam-A.hmm|PF00408.20 evalue:2.6e-11 score:42.8 best_domain_score:40.6 name:PGM_PMM_IV;
sprot_desc Probable phosphoglucosamine mutase;
sprot_id sp|Q8TWY8|GLMM_METKA;
sprot_target db:uniprot_sprot|sp|Q8TWY8|GLMM_METKA 14 449 evalue:1.8e-70 qcov:95.00 identity:38.00;
tigrfam_acc TIGR03990;
tigrfam_desc phosphoglucosamine mutase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name Arch_GlmM;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR03990 evalue:8.2e-143 score:475.6 best_domain_score:475.4 name:TIGR03990;
42827 44665 CDS
ID metaerg.pl|12153
allec_ids 2.6.1.16;
allgo_ids GO:0097367; GO:1901135; GO:0005737; GO:0004360; GO:1901137; GO:0005975; GO:0006541;
allko_ids K00820;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000002.1_193 1 612 evalue:8.5e-250 qcov:100.00 identity:70.80;
kegg_pathway_id 00530; 00251;
kegg_pathway_name Aminosugars metabolism; Glutamate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PWY-6404; UDPNAGSYN-PWY; UDPNACETYLGALSYN-PWY; OANTIGEN-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; UDP-N-acetyl-D-glucosamine biosynthesis I;; UDP-N-acetyl-D-glucosamine biosynthesis II;; O-antigen building blocks biosynthesis (E. coli);;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; UDP-NAc-Glucosamine-Biosynthesis;; UDP-NAc-Glucosamine-Biosynthesis;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;;
pfam_acc PF13522; PF13537; PF01380;
pfam_desc Glutamine amidotransferase domain; Glutamine amidotransferase domain; SIS domain;
pfam_id GATase_6; GATase_7; SIS;
pfam_target db:Pfam-A.hmm|PF13522.6 evalue:1.4e-23 score:82.8 best_domain_score:79.6 name:GATase_6; db:Pfam-A.hmm|PF13537.6 evalue:3.8e-15 score:55.1 best_domain_score:54.3 name:GATase_7; db:Pfam-A.hmm|PF01380.22 evalue:3.9e-58 score:194.2 best_domain_score:108.6 name:SIS;
sprot_desc Glutamine--fructose-6-phosphate aminotransferase [isomerizing];
sprot_id sp|Q8KG38|GLMS_CHLTE;
sprot_target db:uniprot_sprot|sp|Q8KG38|GLMS_CHLTE 1 612 evalue:3.0e-201 qcov:100.00 identity:58.30;
tigrfam_acc TIGR01135;
tigrfam_desc glutamine-fructose-6-phosphate transaminase (isomerizing);
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name glmS;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR01135 evalue:4.6e-248 score:823.8 best_domain_score:823.7 name:TIGR01135;
44704 45129 CDS
ID metaerg.pl|12154
allec_ids 3.1.1.96; 3.6.1.-;
allgo_ids GO:0002161; GO:0005737; GO:0051499; GO:0106026; GO:0043908; GO:0000049; GO:0019478;
allko_ids K07560;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__20CM-4-69-16;s__20CM-4-69-16 sp003222135;
genomedb_acc GCA_003222135.1;
genomedb_target db:genomedb|GCA_003222135.1|PYP18477.1 3 137 evalue:5.6e-48 qcov:95.70 identity:68.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PWY-6502; PWY-6147; PWY-6383; FOLSYN-PWY; ALL-CHORISMATE-PWY; PWY-6404; PWY-5354;
metacyc_pathway_name oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ;
metacyc_pathway_type Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;; Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; ;
pfam_acc PF02580;
pfam_desc D-Tyr-tRNA(Tyr) deacylase;
pfam_id Tyr_Deacylase;
pfam_target db:Pfam-A.hmm|PF02580.16 evalue:1.7e-50 score:170.5 best_domain_score:170.3 name:Tyr_Deacylase;
sprot_desc D-aminoacyl-tRNA deacylase;
sprot_id sp|Q1ATQ8|DTD_RUBXD;
sprot_target db:uniprot_sprot|sp|Q1ATQ8|DTD_RUBXD 1 137 evalue:1.4e-40 qcov:97.20 identity:59.10;
tigrfam_acc TIGR00256;
tigrfam_desc D-tyrosyl-tRNA(Tyr) deacylase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00256;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00256 evalue:8.4e-51 score:171.5 best_domain_score:171.3 name:TIGR00256;
45126 45725 CDS
ID metaerg.pl|12155
allec_ids 3.6.1.9;
allgo_ids GO:0047429; GO:0005737; GO:0035529; GO:0009117;
allko_ids K06287;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000002.1_191 8 197 evalue:3.1e-52 qcov:95.50 identity:61.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF02545;
pfam_desc Maf-like protein;
pfam_id Maf;
pfam_target db:Pfam-A.hmm|PF02545.14 evalue:1.5e-52 score:177.0 best_domain_score:176.8 name:Maf;
sprot_desc dTTP/UTP pyrophosphatase;
sprot_id sp|Q2RL24|NTPPA_MOOTA;
sprot_target db:uniprot_sprot|sp|Q2RL24|NTPPA_MOOTA 5 192 evalue:1.1e-38 qcov:94.50 identity:50.80;
tigrfam_acc TIGR00172;
tigrfam_desc septum formation protein Maf;
tigrfam_mainrole Cellular processes;
tigrfam_name maf;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR00172 evalue:4.5e-50 score:168.9 best_domain_score:168.6 name:TIGR00172;
45788 47293 CDS
ID metaerg.pl|12156
allec_ids 2.7.1.30;
allgo_ids GO:0005975; GO:0016773; GO:0005524; GO:0004370; GO:0019563; GO:0006071; GO:0006072;
allko_ids K00848; K11216; K00880; K00854; K00851; K00864;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000003.1_68 3 497 evalue:2.3e-213 qcov:98.80 identity:72.90;
kegg_pathway_id 00561; 00051; 00030; 00040;
kegg_pathway_name Glycerolipid metabolism; Fructose and mannose metabolism; Pentose phosphate pathway; Pentose and glucuronate interconversions;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PWY0-381; PWY-4261;
metacyc_pathway_name glycerol and glycerophosphodiester degradation;; glycerol degradation I;;
metacyc_pathway_type GLYCEROL-DEG; Super-Pathways;; Fatty-Acid-and-Lipid-Degradation; GLYCEROL-DEG;;
pfam_acc PF02782; PF00370;
pfam_desc FGGY family of carbohydrate kinases, C-terminal domain; FGGY family of carbohydrate kinases, N-terminal domain;
pfam_id FGGY_C; FGGY_N;
pfam_target db:Pfam-A.hmm|PF02782.16 evalue:2.3e-58 score:196.4 best_domain_score:194.5 name:FGGY_C; db:Pfam-A.hmm|PF00370.21 evalue:1.6e-69 score:233.5 best_domain_score:233.1 name:FGGY_N;
sprot_desc Glycerol kinase;
sprot_id sp|Q9RT38|GLPK_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RT38|GLPK_DEIRA 1 497 evalue:9.4e-161 qcov:99.20 identity:57.10;
tigrfam_acc TIGR01311;
tigrfam_desc glycerol kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name glycerol_kin;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01311 evalue:1.5e-198 score:659.3 best_domain_score:659.1 name:TIGR01311;
47428 48000 CDS
ID metaerg.pl|12157
allgo_ids GO:0017003; GO:0017004; GO:0020037; GO:0016021; GO:0005886; GO:0046872;
allko_ids K02197;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06239.1 1 137 evalue:1.3e-36 qcov:72.10 identity:59.10;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF03100;
pfam_desc CcmE;
pfam_id CcmE;
pfam_target db:Pfam-A.hmm|PF03100.15 evalue:4.1e-27 score:93.9 best_domain_score:93.7 name:CcmE;
sprot_desc Cytochrome c-type biogenesis protein CcmE;
sprot_id sp|Q0A805|CCME_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0A805|CCME_ALKEH 3 137 evalue:5.4e-08 qcov:71.10 identity:33.30;
tm_num 1;
47428 48000 transmembrane_helix
ID metaerg.pl|12158
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i47446-47505o;
47997 50156 CDS
ID metaerg.pl|12159
allgo_ids GO:0017004; GO:0020037; GO:0016021; GO:0005886; GO:0015232;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000040.1_40 1 669 evalue:2.4e-259 qcov:93.00 identity:66.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF16327; PF01578;
pfam_desc Cytochrome c-type biogenesis protein CcmF C-terminal; Cytochrome C assembly protein;
pfam_id CcmF_C; Cytochrom_C_asm;
pfam_target db:Pfam-A.hmm|PF16327.5 evalue:1.1e-64 score:218.0 best_domain_score:218.0 name:CcmF_C; db:Pfam-A.hmm|PF01578.20 evalue:3.4e-40 score:137.3 best_domain_score:137.3 name:Cytochrom_C_asm;
sprot_desc Cytochrome c-type biogenesis protein CcmF;
sprot_id sp|P52225|CCMF_PSEFL;
sprot_target db:uniprot_sprot|sp|P52225|CCMF_PSEFL 4 651 evalue:4.1e-101 qcov:90.10 identity:35.90;
tm_num 15;
47997 50156 transmembrane_helix
ID metaerg.pl|12160
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology o48024-48083i48120-48179o48276-48335i48354-48422o48516-48584i48621-48680o48723-48785i48804-48872o48915-48983i49041-49109o49167-49235i49269-49322o49332-49400i49482-49550o49905-49973i;
50153 50602 CDS
ID metaerg.pl|12161
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2982;s__UBA2982 sp002347035;
genomedb_acc GCA_002347035.1;
genomedb_target db:genomedb|GCA_002347035.1|DEAM01000005.1_85 1 141 evalue:1.9e-25 qcov:94.60 identity:46.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
sp YES;
tm_num 1;
50153 50236 signal_peptide
ID metaerg.pl|12162
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
50153 50602 transmembrane_helix
ID metaerg.pl|12163
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i50156-50224o;
50606 51334 CDS
ID metaerg.pl|12164
allec_ids 7.2.2.4; 3.6.3.41;
allgo_ids GO:0005524; GO:0016887; GO:0006814;
allko_ids K02017; K01997; K02010; K05847; K02052; K02006; K11072; K02045; K02071; K06861; K01996; K05816; K02193; K11076; K02065; K01995; K02049; K10111; K01998; K11962; K02000; K01990; K02023; K09697;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000002.1_186 4 234 evalue:1.8e-62 qcov:95.50 identity:57.60;
kegg_pathway_id 02010; 00910;
kegg_pathway_name ABC transporters - General; Nitrogen metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.3e-14 score:52.6 best_domain_score:33.0 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.9e-32 score:111.3 best_domain_score:110.8 name:ABC_tran;
sprot_desc ABC transporter ATP-binding protein NatA;
sprot_id sp|P46903|NATA_BACSU;
sprot_target db:uniprot_sprot|sp|P46903|NATA_BACSU 18 228 evalue:9.2e-37 qcov:87.20 identity:38.30;
tigrfam_acc TIGR01189;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:3.6e-42 score:143.4 best_domain_score:143.2 name:TIGR01189;
51331 52011 CDS
ID metaerg.pl|12165
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC06243.1 8 226 evalue:3.8e-62 qcov:96.90 identity:56.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF01061; PF12698; PF03379;
pfam_desc ABC-2 type transporter; ABC-2 family transporter protein; CcmB protein;
pfam_id ABC2_membrane; ABC2_membrane_3; CcmB;
pfam_target db:Pfam-A.hmm|PF01061.24 evalue:1.2e-11 score:43.7 best_domain_score:43.7 name:ABC2_membrane; db:Pfam-A.hmm|PF12698.7 evalue:1.5e-09 score:36.7 best_domain_score:36.2 name:ABC2_membrane_3; db:Pfam-A.hmm|PF03379.13 evalue:1.8e-33 score:115.1 best_domain_score:114.8 name:CcmB;
tm_num 6;
51331 52011 transmembrane_helix
ID metaerg.pl|12166
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i51406-51462o51490-51543i51634-51702o51730-51798i51835-51903o51931-51999i;
52011 52733 CDS
ID metaerg.pl|12167
allgo_ids GO:0017004; GO:0020037; GO:0016021; GO:0005886; GO:0015232; GO:0015886;
allko_ids K02195;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000003.1_61 6 233 evalue:4.4e-85 qcov:95.00 identity:66.80;
kegg_pathway_id 00910; 02010;
kegg_pathway_name Nitrogen metabolism; ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF01578;
pfam_desc Cytochrome C assembly protein;
pfam_id Cytochrom_C_asm;
pfam_target db:Pfam-A.hmm|PF01578.20 evalue:8e-22 score:77.3 best_domain_score:77.3 name:Cytochrom_C_asm;
sprot_desc Heme exporter protein C;
sprot_id sp|P30962|CCMC_BRADU;
sprot_target db:uniprot_sprot|sp|P30962|CCMC_BRADU 1 209 evalue:5.7e-31 qcov:87.10 identity:36.20;
tm_num 6;
52011 52733 transmembrane_helix
ID metaerg.pl|12168
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i52029-52097o52155-52223i52260-52328o52356-52409i52446-52514o52572-52640i;
52730 53035 CDS
ID metaerg.pl|12169
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000003.1_60 22 100 evalue:3.1e-08 qcov:78.20 identity:44.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
tigrfam_acc TIGR04391;
tigrfam_desc CcmD family protein;
tigrfam_name CcmD_alt_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR04391 evalue:4.3e-07 score:29.0 best_domain_score:28.3 name:TIGR04391;
tm_num 2;
52730 53035 transmembrane_helix
ID metaerg.pl|12170
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i52796-52864o52922-52990i;
53032 54051 CDS
ID metaerg.pl|12171
allec_ids 4.1.2.49;
allgo_ids GO:0006520; GO:0016829;
allko_ids K01620; K20801;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__AG12;s__AG12 sp003222235;
genomedb_acc GCA_003222235.1;
genomedb_target db:genomedb|GCA_003222235.1|PYP70484.1 2 338 evalue:1.6e-85 qcov:99.40 identity:54.30;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF01212;
pfam_desc Beta-eliminating lyase;
pfam_id Beta_elim_lyase;
pfam_target db:Pfam-A.hmm|PF01212.21 evalue:2.5e-80 score:269.1 best_domain_score:268.9 name:Beta_elim_lyase;
sprot_desc L-allo-threonine aldolase;
sprot_id sp|O07051|LTAA_AERJA;
sprot_target db:uniprot_sprot|sp|O07051|LTAA_AERJA 2 339 evalue:1.2e-61 qcov:99.70 identity:43.10;
54565 54032 CDS
ID metaerg.pl|12172
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89538.1 1 176 evalue:1.3e-54 qcov:99.40 identity:59.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF10035;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2179);
pfam_id DUF2179;
pfam_target db:Pfam-A.hmm|PF10035.9 evalue:5.2e-11 score:41.4 best_domain_score:40.8 name:DUF2179;
sprot_desc hypothetical protein;
sprot_id sp|A3DHI6|Y2213_CLOTH;
sprot_target db:uniprot_sprot|sp|A3DHI6|Y2213_CLOTH 11 169 evalue:6.5e-32 qcov:89.80 identity:40.90;
tm_num 3;
54565 54032 transmembrane_helix
ID metaerg.pl|12173
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology o54041-54109i54146-54214o54227-54286i;
55020 54562 CDS
ID metaerg.pl|12174
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__SZUA-544;s__SZUA-544 sp003251175;
genomedb_acc GCA_003251175.1;
genomedb_target db:genomedb|GCA_003251175.1|QKHC01000034.1_10 21 144 evalue:1.6e-11 qcov:81.60 identity:39.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
55239 57818 CDS
ID metaerg.pl|12175
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF13715; PF13620; PF07210; PF09430; PF07715; PF17210;
pfam_desc CarboxypepD_reg-like domain; Carboxypeptidase regulatory-like domain; Protein of unknown function (DUF1416); Protein of unknown function (DUF2012); TonB-dependent Receptor Plug Domain; SdrD B-like domain;
pfam_id CarbopepD_reg_2; CarboxypepD_reg; DUF1416; DUF2012; Plug; SdrD_B;
pfam_target db:Pfam-A.hmm|PF13715.6 evalue:4.5e-33 score:112.4 best_domain_score:44.4 name:CarbopepD_reg_2; db:Pfam-A.hmm|PF13620.6 evalue:2.8e-51 score:171.0 best_domain_score:54.4 name:CarboxypepD_reg; db:Pfam-A.hmm|PF07210.12 evalue:1.4e-09 score:36.9 best_domain_score:33.8 name:DUF1416; db:Pfam-A.hmm|PF09430.10 evalue:2.8e-07 score:29.9 best_domain_score:20.1 name:DUF2012; db:Pfam-A.hmm|PF07715.15 evalue:1.2e-05 score:25.0 best_domain_score:24.0 name:Plug; db:Pfam-A.hmm|PF17210.3 evalue:5.5e-13 score:48.4 best_domain_score:15.7 name:SdrD_B;
sp YES;
tm_num 1;
55239 55337 signal_peptide
ID metaerg.pl|12176
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
55239 57818 transmembrane_helix
ID metaerg.pl|12177
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i55275-55343o;
59277 57916 CDS
ID metaerg.pl|12178
allec_ids 2.-.-.-;
allgo_ids GO:0016779;
allko_ids K13693; K00721; K12984;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000004.1_17 20 450 evalue:6.3e-93 qcov:95.10 identity:45.80;
kegg_pathway_id 00510;
kegg_pathway_name N-Glycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id LPSSYN-PWY; LIPA-CORESYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF01983; PF09837; PF00535; PF13641; PF12804;
pfam_desc Guanylyl transferase CofC like; Uncharacterized protein conserved in bacteria (DUF2064); Glycosyl transferase family 2; Glycosyltransferase like family 2; MobA-like NTP transferase domain;
pfam_id CofC; DUF2064; Glycos_transf_2; Glyco_tranf_2_3; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF01983.16 evalue:3.3e-06 score:25.7 best_domain_score:25.1 name:CofC; db:Pfam-A.hmm|PF09837.9 evalue:1.3e-32 score:111.5 best_domain_score:110.6 name:DUF2064; db:Pfam-A.hmm|PF00535.26 evalue:3.2e-14 score:52.3 best_domain_score:51.6 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:1.1e-08 score:34.6 best_domain_score:29.9 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF12804.7 evalue:2.2e-10 score:40.3 best_domain_score:22.4 name:NTP_transf_3;
tigrfam_acc TIGR04282; TIGR04283;
tigrfam_desc transferase 1, rSAM/selenodomain-associated; transferase 2, rSAM/selenodomain-associated;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name glyco_like_cofC; glyco_like_mftF;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR04282 evalue:1.5e-56 score:190.3 best_domain_score:190.0 name:TIGR04282; db:TIGRFAMs.hmm|TIGR04283 evalue:7.9e-68 score:227.5 best_domain_score:227.1 name:TIGR04283;
60158 59274 CDS
ID metaerg.pl|12179
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000040.1_31 10 291 evalue:4.7e-81 qcov:95.90 identity:54.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF04784;
pfam_desc Protein of unknown function, DUF547;
pfam_id DUF547;
pfam_target db:Pfam-A.hmm|PF04784.14 evalue:1.9e-26 score:91.7 best_domain_score:90.9 name:DUF547;
sp YES;
tm_num 1;
59274 59366 signal_peptide
ID metaerg.pl|12180
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
60158 59274 transmembrane_helix
ID metaerg.pl|12181
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i59286-59354o;
60619 61674 CDS
ID metaerg.pl|12182
allgo_ids GO:0003697; GO:0005524; GO:0006281; GO:0005737; GO:0003684; GO:0008094; GO:0006310; GO:0009432;
allko_ids K03553;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000092.1_3 1 349 evalue:7.0e-156 qcov:99.40 identity:78.90;
kegg_pathway_id 03440;
kegg_pathway_name Homologous recombination;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF06745; PF08423; PF00154;
pfam_desc KaiC; Rad51; recA bacterial DNA recombination protein;
pfam_id ATPase; Rad51; RecA;
pfam_target db:Pfam-A.hmm|PF06745.13 evalue:3.9e-08 score:32.2 best_domain_score:25.8 name:ATPase; db:Pfam-A.hmm|PF08423.11 evalue:2e-15 score:56.0 best_domain_score:54.7 name:Rad51; db:Pfam-A.hmm|PF00154.21 evalue:1.1e-136 score:453.7 best_domain_score:453.5 name:RecA;
sprot_desc hypothetical protein;
sprot_id sp|A0LV04|RECA_ACIC1;
sprot_target db:uniprot_sprot|sp|A0LV04|RECA_ACIC1 10 339 evalue:1.4e-131 qcov:94.00 identity:70.30;
tigrfam_acc TIGR02012;
tigrfam_desc protein RecA;
tigrfam_mainrole DNA metabolism;
tigrfam_name tigrfam_recA;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02012 evalue:3.5e-165 score:548.2 best_domain_score:548.0 name:TIGR02012;
61882 64581 CDS
ID metaerg.pl|12183
allec_ids 6.1.1.7;
allgo_ids GO:0003676; GO:0005737; GO:0004813; GO:0005524; GO:0000049; GO:0008270; GO:0006419;
allko_ids K01872;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000179.1_1 1 899 evalue:0.0e+00 qcov:100.00 identity:63.60;
kegg_pathway_id 00970; 00252;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Alanine and aspartate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF02272; PF01411; PF07973;
pfam_desc DHHA1 domain; tRNA synthetases class II (A); Threonyl and Alanyl tRNA synthetase second additional domain;
pfam_id DHHA1; tRNA-synt_2c; tRNA_SAD;
pfam_target db:Pfam-A.hmm|PF02272.19 evalue:4.4e-11 score:42.6 best_domain_score:41.3 name:DHHA1; db:Pfam-A.hmm|PF01411.19 evalue:4e-186 score:619.0 best_domain_score:618.6 name:tRNA-synt_2c; db:Pfam-A.hmm|PF07973.14 evalue:2.9e-16 score:58.5 best_domain_score:57.0 name:tRNA_SAD;
sprot_desc Alanine--tRNA ligase;
sprot_id sp|A1WXK5|SYA_HALHL;
sprot_target db:uniprot_sprot|sp|A1WXK5|SYA_HALHL 1 892 evalue:3.5e-214 qcov:99.20 identity:48.30;
tigrfam_acc TIGR00344;
tigrfam_desc alanine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name alaS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00344 evalue:4.3e-255 score:848.1 best_domain_score:847.9 name:TIGR00344;
64578 64865 CDS
ID metaerg.pl|12184
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
64862 65731 CDS
ID metaerg.pl|12185
allec_ids 3.1.3.48;
allgo_ids GO:0030145; GO:0004725;
allko_ids K01104;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000003.1_56 20 269 evalue:2.6e-71 qcov:86.50 identity:52.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
sprot_desc Tyrosine-protein phosphatase YwqE;
sprot_id sp|P96717|YWQE_BACSU;
sprot_target db:uniprot_sprot|sp|P96717|YWQE_BACSU 24 286 evalue:2.1e-19 qcov:91.00 identity:28.70;
65728 66513 CDS
ID metaerg.pl|12186
allec_ids 1.1.1.100;
allgo_ids GO:0102131; GO:0102132; GO:0004316; GO:0051287; GO:0016616; GO:0030497; GO:0055114;
allko_ids K12420; K00059;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04796.1 14 261 evalue:1.5e-83 qcov:95.00 identity:64.50;
kegg_pathway_id 01040; 00061;
kegg_pathway_name Biosynthesis of unsaturated fatty acids; Fatty acid biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PWY-6519; FASYN-ELONG-PWY; PWY-5156; PWY-5971; PWY-6282; PWY0-881; PWY-5367; PWY-6285; PWY-6113; PWYG-321; BIOTIN-BIOSYNTHESIS-PWY; PWY-5973; PWY-5989;
metacyc_pathway_name 8-amino-7-oxononanoate biosynthesis I;; fatty acid elongation -- saturated;; superpathway of fatty acid biosynthesis II (plant);; palmitate biosynthesis II (bacteria and plants);; palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate);; superpathway of fatty acid biosynthesis I (E. coli);; petroselinate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; mycolate biosynthesis;; biotin biosynthesis I;; cis-vaccenate biosynthesis;; stearate biosynthesis II (bacteria and plants);;
metacyc_pathway_type 7-Keto-8-aminopelargonate-Biosynthesis;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Palmitate-Biosynthesis;; Palmitoleate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Unsaturated-Fatty-Acids-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; BIOTIN-SYN; Super-Pathways;; Unsaturated-Fatty-Acids-Biosynthesis;; Stearate-Biosynthesis;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:8.3e-49 score:164.9 best_domain_score:164.6 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:1.2e-61 score:207.5 best_domain_score:207.2 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:5e-09 score:35.5 best_domain_score:34.9 name:KR;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] reductase;
sprot_id sp|P73574|FABG_SYNY3;
sprot_target db:uniprot_sprot|sp|P73574|FABG_SYNY3 11 258 evalue:5.4e-35 qcov:95.00 identity:37.50;
66510 67934 CDS
ID metaerg.pl|12187
allec_ids 2.7.7.72;
allgo_ids GO:0003723; GO:0006396; GO:0016779; GO:0005524; GO:0052929; GO:0052928; GO:0052927; GO:0000287; GO:0000049; GO:0016437; GO:0042245; GO:0001680;
allko_ids K00970; K00974;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90827.1 4 465 evalue:1.9e-116 qcov:97.50 identity:54.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF01743; PF12627; PF13735;
pfam_desc Poly A polymerase head domain; Probable RNA and SrmB- binding site of polymerase A; tRNA nucleotidyltransferase domain 2 putative;
pfam_id PolyA_pol; PolyA_pol_RNAbd; tRNA_NucTran2_2;
pfam_target db:Pfam-A.hmm|PF01743.20 evalue:3.7e-31 score:107.4 best_domain_score:106.9 name:PolyA_pol; db:Pfam-A.hmm|PF12627.7 evalue:1.4e-09 score:36.8 best_domain_score:35.8 name:PolyA_pol_RNAbd; db:Pfam-A.hmm|PF13735.6 evalue:1.5e-06 score:27.5 best_domain_score:26.9 name:tRNA_NucTran2_2;
sprot_desc CCA-adding enzyme;
sprot_id sp|Q5KXX0|CCA_GEOKA;
sprot_target db:uniprot_sprot|sp|Q5KXX0|CCA_GEOKA 13 354 evalue:7.8e-40 qcov:72.20 identity:33.80;
67931 69328 CDS
ID metaerg.pl|12188
allgo_ids GO:0005524; GO:0003677; GO:0008047; GO:0043142; GO:0006261; GO:0006282;
allko_ids K02341; K02340; K02343; K07478;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000040.1_21 4 456 evalue:2.6e-158 qcov:97.40 identity:65.10;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF00004; PF13191; PF07728; PF16193; PF12002; PF05496; PF00158;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA ATPase domain; AAA domain (dynein-related subfamily); AAA C-terminal domain; MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase RuvB P-loop domain; Sigma-54 interaction domain;
pfam_id AAA; AAA_16; AAA_5; AAA_assoc_2; MgsA_C; RuvB_N; Sigma54_activat;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:2.5e-14 score:53.1 best_domain_score:52.4 name:AAA; db:Pfam-A.hmm|PF13191.6 evalue:7.7e-10 score:38.6 best_domain_score:26.4 name:AAA_16; db:Pfam-A.hmm|PF07728.14 evalue:3.7e-06 score:26.2 best_domain_score:23.0 name:AAA_5; db:Pfam-A.hmm|PF16193.5 evalue:1.5e-22 score:78.9 best_domain_score:77.7 name:AAA_assoc_2; db:Pfam-A.hmm|PF12002.8 evalue:8.7e-67 score:223.5 best_domain_score:222.7 name:MgsA_C; db:Pfam-A.hmm|PF05496.12 evalue:1.6e-11 score:43.4 best_domain_score:42.3 name:RuvB_N; db:Pfam-A.hmm|PF00158.26 evalue:0.0002 score:20.4 best_domain_score:11.2 name:Sigma54_activat;
sprot_desc Replication-associated recombination protein A;
sprot_id sp|P45262|RARA_HAEIN;
sprot_target db:uniprot_sprot|sp|P45262|RARA_HAEIN 32 455 evalue:1.0e-100 qcov:91.20 identity:44.40;
69354 69809 CDS
ID metaerg.pl|12189
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__Gemmatimonadaceae;g__Gemmatirosa;s__Gemmatirosa kalamazoonesis;
genomedb_acc GCF_000522985.1;
genomedb_target db:genomedb|GCF_000522985.1|WP_104022759.1 15 150 evalue:1.5e-09 qcov:90.10 identity:30.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF03168;
pfam_desc Late embryogenesis abundant protein;
pfam_id LEA_2;
pfam_target db:Pfam-A.hmm|PF03168.13 evalue:2.5e-12 score:46.5 best_domain_score:46.1 name:LEA_2;
sp YES;
69354 69398 lipoprotein_signal_peptide
ID metaerg.pl|12190
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
69873 71138 CDS
ID metaerg.pl|12191
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0046872;
allko_ids K03665;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000179.1_10 1 414 evalue:4.3e-152 qcov:98.30 identity:67.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF02421; PF16360; PF13167; PF01926;
pfam_desc Ferrous iron transport protein B; GTP-binding GTPase Middle Region; GTP-binding GTPase N-terminal; 50S ribosome-binding GTPase;
pfam_id FeoB_N; GTP-bdg_M; GTP-bdg_N; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF02421.18 evalue:5.6e-05 score:22.0 best_domain_score:20.2 name:FeoB_N; db:Pfam-A.hmm|PF16360.5 evalue:1.1e-32 score:111.6 best_domain_score:110.3 name:GTP-bdg_M; db:Pfam-A.hmm|PF13167.6 evalue:5.9e-34 score:115.9 best_domain_score:115.0 name:GTP-bdg_N; db:Pfam-A.hmm|PF01926.23 evalue:9.4e-21 score:73.3 best_domain_score:66.5 name:MMR_HSR1;
sprot_desc GTPase HflX;
sprot_id sp|A0L4B2|HFLX_MAGMM;
sprot_target db:uniprot_sprot|sp|A0L4B2|HFLX_MAGMM 2 417 evalue:6.8e-88 qcov:98.80 identity:45.10;
tigrfam_acc TIGR03156;
tigrfam_desc GTP-binding protein HflX;
tigrfam_mainrole Unknown function;
tigrfam_name GTP_HflX;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR03156 evalue:1.7e-137 score:457.2 best_domain_score:456.9 name:TIGR03156;
71191 72054 CDS
ID metaerg.pl|12192
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000003.1_51 2 264 evalue:5.1e-72 qcov:91.60 identity:55.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF10728; PF10727;
pfam_desc Domain of unknown function (DUF2520); Rossmann-like domain;
pfam_id DUF2520; Rossmann-like;
pfam_target db:Pfam-A.hmm|PF10728.9 evalue:3.2e-35 score:119.9 best_domain_score:119.4 name:DUF2520; db:Pfam-A.hmm|PF10727.9 evalue:7.7e-05 score:21.8 best_domain_score:19.1 name:Rossmann-like;
72051 72818 CDS
ID metaerg.pl|12193
allec_ids 2.6.99.2;
allgo_ids GO:0005737; GO:0008615; GO:0033856;
allko_ids K03474;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__Bin94;s__Bin94 sp002238865;
genomedb_acc GCA_002238865.1;
genomedb_target db:genomedb|GCA_002238865.1|MPNE01000004.1_29 1 255 evalue:3.2e-94 qcov:100.00 identity:68.80;
kegg_pathway_id 00750;
kegg_pathway_name Vitamin B6 metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PYRIDOXSYN-PWY; PWY0-845;
metacyc_pathway_name pyridoxal 5'-phosphate biosynthesis I;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;;
metacyc_pathway_type Vitamin-B6-Biosynthesis;; Super-Pathways; Vitamin-B6-Biosynthesis;;
pfam_acc PF03740;
pfam_desc Pyridoxal phosphate biosynthesis protein PdxJ;
pfam_id PdxJ;
pfam_target db:Pfam-A.hmm|PF03740.13 evalue:4e-91 score:303.5 best_domain_score:303.3 name:PdxJ;
sprot_desc Pyridoxine 5'-phosphate synthase;
sprot_id sp|B8HKL1|PDXJ_CYAP4;
sprot_target db:uniprot_sprot|sp|B8HKL1|PDXJ_CYAP4 3 236 evalue:1.5e-69 qcov:91.80 identity:60.40;
tigrfam_acc TIGR00559;
tigrfam_desc pyridoxine 5'-phosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name pdxJ;
tigrfam_sub1role Pyridoxine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00559 evalue:1.5e-81 score:272.7 best_domain_score:272.5 name:TIGR00559;
72818 73852 CDS
ID metaerg.pl|12194
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000003.1_49 1 337 evalue:1.3e-90 qcov:98.00 identity:51.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF03706;
pfam_desc Lysylphosphatidylglycerol synthase TM region;
pfam_id LPG_synthase_TM;
pfam_target db:Pfam-A.hmm|PF03706.13 evalue:1.3e-52 score:178.5 best_domain_score:178.3 name:LPG_synthase_TM;
tigrfam_acc TIGR00374;
tigrfam_desc TIGR00374 family protein;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00374;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00374 evalue:1e-27 score:96.6 best_domain_score:96.4 name:TIGR00374;
tm_num 8;
72818 73852 transmembrane_helix
ID metaerg.pl|12195
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i72830-72883o72926-72982i73193-73246o73274-73342i73403-73462o73490-73558i73595-73663o73706-73774i;
73849 74892 CDS
ID metaerg.pl|12196
allec_ids 2.7.1.148;
allgo_ids GO:0005524; GO:0050515; GO:0019288; GO:0016114;
allko_ids K00919;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN90834.1 21 327 evalue:2.9e-53 qcov:88.50 identity:46.90;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
metacyc_pathway_id PWY-5121; PWY-6270; NONMEVIPP-PWY;
metacyc_pathway_name superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; isoprene biosynthesis I;; methylerythritol phosphate pathway I;;
metacyc_pathway_type DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; ISOPRENOIDS; Super-Pathways;; MEP-Pathways;;
pfam_acc PF08544; PF00288;
pfam_desc GHMP kinases C terminal ; GHMP kinases N terminal domain;
pfam_id GHMP_kinases_C; GHMP_kinases_N;
pfam_target db:Pfam-A.hmm|PF08544.13 evalue:7.4e-06 score:25.5 best_domain_score:24.1 name:GHMP_kinases_C; db:Pfam-A.hmm|PF00288.26 evalue:2.3e-09 score:36.6 best_domain_score:35.2 name:GHMP_kinases_N;
sprot_desc 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;
sprot_id sp|Q01QR0|ISPE_SOLUE;
sprot_target db:uniprot_sprot|sp|Q01QR0|ISPE_SOLUE 15 312 evalue:1.2e-37 qcov:85.90 identity:37.80;
tigrfam_acc TIGR00154;
tigrfam_desc 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ispE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00154 evalue:5.7e-42 score:143.4 best_domain_score:111.1 name:TIGR00154;
74991 77075 CDS
ID metaerg.pl|12197
allgo_ids GO:0006508;
allko_ids K01730; K01303;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__HRBIN33;s__HRBIN33 sp002923375;
genomedb_acc GCA_002923375.1;
genomedb_target db:genomedb|GCA_002923375.1|GBD31392.1 28 683 evalue:3.3e-258 qcov:94.50 identity:62.60;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
pfam_acc PF05448; PF00930; PF07676; PF00326;
pfam_desc Acetyl xylan esterase (AXE1); Dipeptidyl peptidase IV (DPP IV) N-terminal region; WD40-like Beta Propeller Repeat; Prolyl oligopeptidase family;
pfam_id AXE1; DPPIV_N; PD40; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF05448.12 evalue:9.6e-07 score:27.0 best_domain_score:21.4 name:AXE1; db:Pfam-A.hmm|PF00930.21 evalue:2.6e-11 score:42.1 best_domain_score:26.9 name:DPPIV_N; db:Pfam-A.hmm|PF07676.12 evalue:1.6e-18 score:65.4 best_domain_score:28.4 name:PD40; db:Pfam-A.hmm|PF00326.21 evalue:1.7e-45 score:154.3 best_domain_score:153.5 name:Peptidase_S9;
sp YES;
tm_num 1;
74991 75083 signal_peptide
ID metaerg.pl|12198
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
74991 77075 transmembrane_helix
ID metaerg.pl|12199
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i75024-75092o;
78107 77133 CDS
ID metaerg.pl|12200
genomedb_OC d__Bacteria;p__Myxococcota;c__Bradimonadia;o__Bradymonadales;f__Bradymonadaceae;g__B210;s__B210 sp003260125;
genomedb_acc GCF_003260125.1;
genomedb_target db:genomedb|GCF_003260125.1|WP_111729237.1 26 310 evalue:2.9e-23 qcov:88.00 identity:29.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
tm_num 1;
78107 77133 transmembrane_helix
ID metaerg.pl|12201
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.8222; 0.0243974; ; 11.4637; 1.33412;
topology i77214-77282o;
>Feature NODE_94_length_77842_cov_91.2988
217 1704 CDS
ID metaerg.pl|12202
allec_ids 2.7.1.30;
allgo_ids GO:0005975; GO:0016773; GO:0005524; GO:0004370; GO:0019563; GO:0006071; GO:0006072;
allko_ids K00851; K00854; K00880; K00848; K11216; K00864;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797674.1 1 495 evalue:4.7e-267 qcov:100.00 identity:90.90;
kegg_pathway_id 00561; 00051; 00030; 00040;
kegg_pathway_name Glycerolipid metabolism; Fructose and mannose metabolism; Pentose phosphate pathway; Pentose and glucuronate interconversions;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id PWY0-381; PWY-4261;
metacyc_pathway_name glycerol and glycerophosphodiester degradation;; glycerol degradation I;;
metacyc_pathway_type GLYCEROL-DEG; Super-Pathways;; Fatty-Acid-and-Lipid-Degradation; GLYCEROL-DEG;;
pfam_acc PF02782; PF00370;
pfam_desc FGGY family of carbohydrate kinases, C-terminal domain; FGGY family of carbohydrate kinases, N-terminal domain;
pfam_id FGGY_C; FGGY_N;
pfam_target db:Pfam-A.hmm|PF02782.16 evalue:1.5e-56 score:190.5 best_domain_score:190.5 name:FGGY_C; db:Pfam-A.hmm|PF00370.21 evalue:7.7e-73 score:244.3 best_domain_score:243.9 name:FGGY_N;
sprot_desc Glycerol kinase;
sprot_id sp|Q165D5|GLPK_ROSDO;
sprot_target db:uniprot_sprot|sp|Q165D5|GLPK_ROSDO 1 493 evalue:2.4e-225 qcov:99.60 identity:75.90;
tigrfam_acc TIGR01311;
tigrfam_desc glycerol kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name glycerol_kin;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01311 evalue:2.3e-204 score:678.4 best_domain_score:678.3 name:TIGR01311;
1714 2826 CDS
ID metaerg.pl|12203
allec_ids 1.1.-.-;
allgo_ids GO:0016491; GO:0046872; GO:0055114; GO:0004022; GO:0016616; GO:0046336;
allko_ids K04022;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469269.1 2 370 evalue:3.1e-146 qcov:99.70 identity:76.50;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id GAMMAHEXCHLORDEG-PWY;
metacyc_pathway_name γ-hexachlorocyclohexane degradation;;
metacyc_pathway_type CHLORINATED-COMPOUNDS-DEG;;
pfam_acc PF00465; PF13685;
pfam_desc Iron-containing alcohol dehydrogenase ; Iron-containing alcohol dehydrogenase;
pfam_id Fe-ADH; Fe-ADH_2;
pfam_target db:Pfam-A.hmm|PF00465.19 evalue:2.2e-83 score:279.3 best_domain_score:279.1 name:Fe-ADH; db:Pfam-A.hmm|PF13685.6 evalue:3.7e-12 score:45.7 best_domain_score:23.1 name:Fe-ADH_2;
sprot_desc Ethanolamine utilization protein EutG;
sprot_id sp|P76553|EUTG_ECOLI;
sprot_target db:uniprot_sprot|sp|P76553|EUTG_ECOLI 42 370 evalue:2.6e-30 qcov:88.90 identity:34.50;
4699 2831 CDS
ID metaerg.pl|12204
allec_ids 6.6.1.2;
allgo_ids GO:0009236; GO:0005737; GO:0005524; GO:0051116; GO:0006779;
allko_ids K09883;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482283.1 1 621 evalue:0.0e+00 qcov:99.80 identity:90.20;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id P381-PWY;
metacyc_pathway_name adenosylcobalamin biosynthesis II (aerobic);;
metacyc_pathway_type De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;;
pfam_acc PF06213; PF11775;
pfam_desc Cobalamin biosynthesis protein CobT; Cobalamin biosynthesis protein CobT VWA domain;
pfam_id CobT; CobT_C;
pfam_target db:Pfam-A.hmm|PF06213.12 evalue:5.1e-91 score:304.1 best_domain_score:303.5 name:CobT; db:Pfam-A.hmm|PF11775.8 evalue:4e-105 score:349.5 best_domain_score:349.0 name:CobT_C;
sprot_desc Aerobic cobaltochelatase subunit CobT;
sprot_id sp|P29934|COBT_SINSX;
sprot_target db:uniprot_sprot|sp|P29934|COBT_SINSX 2 621 evalue:2.2e-167 qcov:99.70 identity:61.80;
tigrfam_acc TIGR01651;
tigrfam_desc cobaltochelatase, CobT subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name CobT;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01651 evalue:1.5e-250 score:832.2 best_domain_score:832.0 name:TIGR01651;
4872 5462 CDS
ID metaerg.pl|12205
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469840.1 1 195 evalue:5.5e-94 qcov:99.50 identity:84.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF02525; PF03358;
pfam_desc Flavodoxin-like fold; NADPH-dependent FMN reductase;
pfam_id Flavodoxin_2; FMN_red;
pfam_target db:Pfam-A.hmm|PF02525.17 evalue:8.5e-07 score:28.1 best_domain_score:27.9 name:Flavodoxin_2; db:Pfam-A.hmm|PF03358.15 evalue:1e-31 score:109.0 best_domain_score:108.6 name:FMN_red;
6704 5634 CDS
ID metaerg.pl|12206
allgo_ids GO:0007165; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246296.1 9 355 evalue:2.6e-110 qcov:97.50 identity:59.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF02743; PF00015;
pfam_desc Cache domain; Methyl-accepting chemotaxis protein (MCP) signalling domain;
pfam_id dCache_1; MCPsignal;
pfam_target db:Pfam-A.hmm|PF02743.18 evalue:9.8e-15 score:54.2 best_domain_score:52.9 name:dCache_1; db:Pfam-A.hmm|PF00015.21 evalue:7.7e-16 score:57.6 best_domain_score:56.8 name:MCPsignal;
6924 7352 CDS
ID metaerg.pl|12207
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__GCA-002705045;s__GCA-002705045 sp002704385;
genomedb_acc GCA_002704385.2;
genomedb_target db:genomedb|GCA_002704385.2|PQM65513.1 1 132 evalue:8.8e-25 qcov:93.00 identity:49.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
tm_num 4;
6924 7352 transmembrane_helix
ID metaerg.pl|12208
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology i6981-7034o7092-7160i7179-7247o7260-7328i;
8360 7389 CDS
ID metaerg.pl|12209
allec_ids 6.6.1.2;
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0051116; GO:0009236; GO:0006779;
allko_ids K09882;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479894.1 1 323 evalue:1.9e-179 qcov:100.00 identity:96.90;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id P381-PWY;
metacyc_pathway_name adenosylcobalamin biosynthesis II (aerobic);;
metacyc_pathway_type De-Novo-Adenosylcobalamin-Biosynthesis; Super-Pathways;;
pfam_acc PF00004; PF07728; PF08406; PF12556;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal ; Cobaltochelatase CobS subunit N terminal;
pfam_id AAA; AAA_5; CbbQ_C; CobS_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:0.00016 score:21.3 best_domain_score:20.6 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:3.7e-13 score:48.9 best_domain_score:48.0 name:AAA_5; db:Pfam-A.hmm|PF08406.10 evalue:0.00011 score:21.6 best_domain_score:20.8 name:CbbQ_C; db:Pfam-A.hmm|PF12556.8 evalue:6.4e-15 score:53.8 best_domain_score:52.8 name:CobS_N;
sprot_desc Aerobic cobaltochelatase subunit CobS;
sprot_id sp|P29933|COBS_SINSX;
sprot_target db:uniprot_sprot|sp|P29933|COBS_SINSX 7 322 evalue:1.5e-130 qcov:97.80 identity:71.50;
tigrfam_acc TIGR01650;
tigrfam_desc cobaltochelatase, CobS subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name PD_CobS;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01650 evalue:1.7e-176 score:585.3 best_domain_score:585.0 name:TIGR01650;
9616 8438 CDS
ID metaerg.pl|12210
allec_ids 1.14.15.33;
allgo_ids GO:0005506; GO:0016705; GO:0020037; GO:0055114; GO:0004497; GO:0033068;
allko_ids K00517; K00493; K16006;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071796033.1 3 390 evalue:2.8e-177 qcov:99.00 identity:79.40;
kegg_pathway_id 00361; 00940; 00380; 00071; 00626; 00903;
kegg_pathway_name gamma-Hexachlorocyclohexane degradation; Phenylpropanoid biosynthesis; Tryptophan metabolism; Fatty acid metabolism; Naphthalene and anthracene degradation; Limonene and pinene degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00067;
pfam_desc Cytochrome P450;
pfam_id p450;
pfam_target db:Pfam-A.hmm|PF00067.22 evalue:7.5e-27 score:93.4 best_domain_score:77.1 name:p450;
sprot_desc Cytochrome P450 monooxygenase PikC;
sprot_id sp|O87605|PIKC_STRVZ;
sprot_target db:uniprot_sprot|sp|O87605|PIKC_STRVZ 12 373 evalue:5.3e-50 qcov:92.30 identity:34.50;
11010 9625 CDS
ID metaerg.pl|12211
allec_ids 3.4.13.-;
allgo_ids GO:0016787; GO:0005737; GO:0062040; GO:0016805; GO:0046872; GO:0008237;
allko_ids K01439; K01438; K15428;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469844.1 1 461 evalue:9.9e-235 qcov:100.00 identity:85.20;
kegg_pathway_id 00300; 00220;
kegg_pathway_name Lysine biosynthesis; Urea cycle and metabolism of amino groups;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:2.4e-21 score:74.9 best_domain_score:74.1 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:6.9e-34 score:116.6 best_domain_score:116.3 name:Peptidase_M20;
sprot_desc Cys-Gly metallodipeptidase DUG1;
sprot_id sp|Q5AKA5|DUG1_CANAL;
sprot_target db:uniprot_sprot|sp|Q5AKA5|DUG1_CANAL 5 461 evalue:1.9e-54 qcov:99.10 identity:30.30;
11129 11539 CDS
ID metaerg.pl|12212
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469845.1 10 136 evalue:9.3e-32 qcov:93.40 identity:65.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
sp YES;
11129 11218 signal_peptide
ID metaerg.pl|12213
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
11741 12964 CDS
ID metaerg.pl|12214
allec_ids 2.3.1.37;
allgo_ids GO:0009058; GO:0030170; GO:0003870; GO:0006782;
allko_ids K00643;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795669.1 1 407 evalue:8.2e-225 qcov:100.00 identity:93.90;
kegg_pathway_id 00260; 00860;
kegg_pathway_name Glycine, serine and threonine metabolism; Porphyrin and chlorophyll metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id PWY-5920; PWY-5189; PWY-5529;
metacyc_pathway_name superpathway of b heme biosynthesis from glycine;; tetrapyrrole biosynthesis II (from glycine);; superpathway of bacteriochlorophyll a biosynthesis;;
metacyc_pathway_type Heme-b-Biosynthesis; Super-Pathways;; Tetrapyrrole-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;;
pfam_acc PF00155;
pfam_desc Aminotransferase class I and II;
pfam_id Aminotran_1_2;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:2.2e-73 score:246.8 best_domain_score:246.6 name:Aminotran_1_2;
sprot_desc 5-aminolevulinate synthase;
sprot_id sp|P43089|HEM1_PARDP;
sprot_target db:uniprot_sprot|sp|P43089|HEM1_PARDP 1 407 evalue:6.6e-197 qcov:100.00 identity:81.40;
tigrfam_acc TIGR01821;
tigrfam_desc 5-aminolevulinic acid synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name 5aminolev_synth;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR01821 evalue:1.4e-202 score:672.1 best_domain_score:671.9 name:TIGR01821;
13086 14312 CDS
ID metaerg.pl|12215
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795668.1 1 408 evalue:6.0e-167 qcov:100.00 identity:73.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF13464; PF13413;
pfam_desc Domain of unknown function (DUF4115); Helix-turn-helix domain;
pfam_id DUF4115; HTH_25;
pfam_target db:Pfam-A.hmm|PF13464.6 evalue:2.3e-19 score:68.6 best_domain_score:67.7 name:DUF4115; db:Pfam-A.hmm|PF13413.6 evalue:2e-17 score:62.0 best_domain_score:61.1 name:HTH_25;
tm_num 1;
13086 14312 transmembrane_helix
ID metaerg.pl|12216
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology o13539-13607i;
14572 15645 CDS
ID metaerg.pl|12217
allec_ids 1.17.7.3; 1.17.7.1;
allgo_ids GO:0016114; GO:0046429; GO:0055114; GO:0051539; GO:0005506; GO:0019288;
allko_ids K03526;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246288.1 1 355 evalue:2.9e-181 qcov:99.40 identity:92.10;
kegg_pathway_id 00100;
kegg_pathway_name Biosynthesis of steroids;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id NONMEVIPP-PWY; PWY-6270; PWY-5121;
metacyc_pathway_name methylerythritol phosphate pathway I;; isoprene biosynthesis I;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);;
metacyc_pathway_type MEP-Pathways;; ISOPRENOIDS; Super-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;;
pfam_acc PF04551;
pfam_desc GcpE protein;
pfam_id GcpE;
pfam_target db:Pfam-A.hmm|PF04551.14 evalue:3.2e-126 score:420.4 best_domain_score:420.2 name:GcpE;
sprot_desc 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin);
sprot_id sp|Q5LQ99|ISPG_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LQ99|ISPG_RUEPO 1 354 evalue:7.6e-173 qcov:99.20 identity:85.90;
tigrfam_acc TIGR00612;
tigrfam_desc 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ispG_gcpE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00612 evalue:1.4e-129 score:431.5 best_domain_score:431.3 name:TIGR00612;
19191 15733 CDS
ID metaerg.pl|12218
allec_ids 1.5.5.2; 1.2.1.88;
allgo_ids GO:0016491; GO:0055114; GO:0009898; GO:0016020; GO:0003842; GO:0003700; GO:0016620; GO:0004657; GO:0051699; GO:0043565; GO:0006561; GO:0006562; GO:0010133; GO:0006560; GO:0015824;
allko_ids K13821; K00318; K00294;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795666.1 1 1152 evalue:0.0e+00 qcov:100.00 identity:80.80;
kegg_pathway_id 00251; 00330;
kegg_pathway_name Glutamate metabolism; Arginine and proline metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00171; PF01619; PF14850;
pfam_desc Aldehyde dehydrogenase family; Proline dehydrogenase; DNA-binding domain of Proline dehydrogenase;
pfam_id Aldedh; Pro_dh; Pro_dh-DNA_bdg;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:1.9e-108 score:362.2 best_domain_score:361.3 name:Aldedh; db:Pfam-A.hmm|PF01619.18 evalue:7.1e-97 score:323.7 best_domain_score:323.2 name:Pro_dh; db:Pfam-A.hmm|PF14850.6 evalue:4e-45 score:152.2 best_domain_score:151.1 name:Pro_dh-DNA_bdg;
sprot_desc Bifunctional protein PutA;
sprot_id sp|P10503|PUTA_SALTY;
sprot_target db:uniprot_sprot|sp|P10503|PUTA_SALTY 1 1147 evalue:8.2e-269 qcov:99.60 identity:47.00;
tigrfam_acc TIGR01238;
tigrfam_desc delta-1-pyrroline-5-carboxylate dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name D1pyr5carbox3;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01238 evalue:5.7e-186 score:618.0 best_domain_score:605.3 name:TIGR01238;
19309 19779 CDS
ID metaerg.pl|12219
allgo_ids GO:0003700; GO:0006355; GO:0043565;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795665.1 1 155 evalue:5.3e-63 qcov:99.40 identity:81.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF01037; PF13412; PF01022; PF13404; PF08222; PF09339; PF01047; PF12802;
pfam_desc Lrp/AsnC ligand binding domain; Winged helix-turn-helix DNA-binding; Bacterial regulatory protein, arsR family; AsnC-type helix-turn-helix domain; CodY helix-turn-helix domain; IclR helix-turn-helix domain; MarR family; MarR family;
pfam_id AsnC_trans_reg; HTH_24; HTH_5; HTH_AsnC-type; HTH_CodY; HTH_IclR; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF01037.21 evalue:6.2e-23 score:79.8 best_domain_score:79.3 name:AsnC_trans_reg; db:Pfam-A.hmm|PF13412.6 evalue:4.4e-16 score:57.4 best_domain_score:56.7 name:HTH_24; db:Pfam-A.hmm|PF01022.20 evalue:4.5e-05 score:22.5 best_domain_score:21.5 name:HTH_5; db:Pfam-A.hmm|PF13404.6 evalue:1.1e-13 score:49.9 best_domain_score:49.1 name:HTH_AsnC-type; db:Pfam-A.hmm|PF08222.11 evalue:5.1e-05 score:22.0 best_domain_score:21.2 name:HTH_CodY; db:Pfam-A.hmm|PF09339.10 evalue:2.5e-07 score:29.6 best_domain_score:28.7 name:HTH_IclR; db:Pfam-A.hmm|PF01047.22 evalue:1.4e-07 score:30.5 best_domain_score:29.6 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:3.9e-07 score:29.1 best_domain_score:28.3 name:MarR_2;
sprot_desc Proline dehydrogenase transcriptional activator;
sprot_id sp|Q44333|PUTR_RHIRD;
sprot_target db:uniprot_sprot|sp|Q44333|PUTR_RHIRD 6 151 evalue:1.5e-45 qcov:93.60 identity:63.70;
19854 20255 CDS
ID metaerg.pl|12220
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481747.1 1 133 evalue:9.1e-40 qcov:100.00 identity:63.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF16156;
pfam_desc Domain of unknown function (DUF4864);
pfam_id DUF4864;
pfam_target db:Pfam-A.hmm|PF16156.5 evalue:1.2e-30 score:105.4 best_domain_score:105.2 name:DUF4864;
sp YES;
19854 19913 signal_peptide
ID metaerg.pl|12221
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
20429 22717 CDS
ID metaerg.pl|12222
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795647.1 1 762 evalue:0.0e+00 qcov:100.00 identity:75.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF12708;
pfam_desc Pectate lyase superfamily protein;
pfam_id Pectate_lyase_3;
pfam_target db:Pfam-A.hmm|PF12708.7 evalue:2.5e-10 score:39.8 best_domain_score:33.6 name:Pectate_lyase_3;
23484 22777 CDS
ID metaerg.pl|12223
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468620.1 2 231 evalue:2.9e-57 qcov:97.90 identity:46.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
23964 25910 CDS
ID metaerg.pl|12224
allec_ids 6.2.1.1;
allgo_ids GO:0003824; GO:0003987; GO:0016208; GO:0005524; GO:0046872; GO:0019427;
allko_ids K05939; K14467; K01586; K01779; K00992; K02364; K00143; K03367; K01776; K01652; K01897; K01909; K01904; K01895;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795646.1 1 648 evalue:0.0e+00 qcov:100.00 identity:92.40;
kegg_pathway_id 00940; 00720; 00300; 00640; 00650; 00620; 00770; 01053; 00290; 00564; 00010; 00310; 00071; 00471; 00660; 00251; 00252; 00473;
kegg_pathway_name Phenylpropanoid biosynthesis; Reductive carboxylate cycle (CO2 fixation); Lysine biosynthesis; Propanoate metabolism; Butanoate metabolism; Pyruvate metabolism; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; Valine, leucine and isoleucine biosynthesis; Glycerophospholipid metabolism; Glycolysis / Gluconeogenesis; Lysine degradation; Fatty acid metabolism; D-Glutamine and D-glutamate metabolism; C5-Branched dibasic acid metabolism; Glutamate metabolism; Alanine and aspartate metabolism; D-Alanine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id PWY0-1313; PWY66-21; GLUDEG-II-PWY; ACETATEUTIL-PWY; PWY66-161; PWY66-162;
metacyc_pathway_name acetate conversion to acetyl-CoA;; ethanol degradation II;; L-glutamate degradation VII (to butanoate);; superpathway of acetate utilization and formation;; ethanol degradation III;; ethanol degradation IV;;
metacyc_pathway_type CARBOXYLATES-DEG;; Ethanol-Degradation;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; Ethanol-Degradation;; Ethanol-Degradation;;
pfam_acc PF16177; PF00501; PF13193;
pfam_desc Acetyl-coenzyme A synthetase N-terminus; AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id ACAS_N; AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF16177.5 evalue:1.3e-23 score:81.9 best_domain_score:80.6 name:ACAS_N; db:Pfam-A.hmm|PF00501.28 evalue:5.4e-97 score:324.3 best_domain_score:324.0 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:2.2e-25 score:88.7 best_domain_score:87.1 name:AMP-binding_C;
sprot_desc Acetyl-coenzyme A synthetase;
sprot_id sp|O68040|ACSA_RHOCB;
sprot_target db:uniprot_sprot|sp|O68040|ACSA_RHOCB 15 648 evalue:0.0e+00 qcov:97.80 identity:79.30;
tigrfam_acc TIGR02188;
tigrfam_desc acetate--CoA ligase;
tigrfam_name Ac_CoA_lig_AcsA;
tigrfam_target db:TIGRFAMs.hmm|TIGR02188 evalue:0 score:1021.5 best_domain_score:1021.3 name:TIGR02188;
25916 26596 CDS
ID metaerg.pl|12225
allec_ids 2.7.4.3; 2.7.4.-;
allgo_ids GO:0004017; GO:0005737; GO:0005524; GO:0008270; GO:0044209;
allko_ids K00939; K01939;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_100319206.1 1 226 evalue:1.4e-101 qcov:100.00 identity:84.10;
kegg_pathway_id 00230; 00252;
kegg_pathway_name Purine metabolism; Alanine and aspartate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id PWY-5107; PWY-6126; PRPP-PWY; P1-PWY; DENOVOPURINE2-PWY; PWY-6577;
metacyc_pathway_name phytol salvage pathway;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; ; superpathway of purine nucleotides de novo biosynthesis II;; farnesylcysteine salvage pathway;;
metacyc_pathway_type DITERPENOID-SYN;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; ; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;;
pfam_acc PF13207; PF13671; PF00406; PF05191;
pfam_desc AAA domain; AAA domain; Adenylate kinase; Adenylate kinase, active site lid;
pfam_id AAA_17; AAA_33; ADK; ADK_lid;
pfam_target db:Pfam-A.hmm|PF13207.6 evalue:2.4e-24 score:85.6 best_domain_score:85.4 name:AAA_17; db:Pfam-A.hmm|PF13671.6 evalue:4.5e-07 score:29.4 best_domain_score:28.6 name:AAA_33; db:Pfam-A.hmm|PF00406.22 evalue:1.5e-54 score:183.4 best_domain_score:183.2 name:ADK; db:Pfam-A.hmm|PF05191.14 evalue:2.2e-11 score:42.7 best_domain_score:42.1 name:ADK_lid;
sprot_desc Adenylate kinase;
sprot_id sp|B9JDU9|KAD_AGRRK;
sprot_target db:uniprot_sprot|sp|B9JDU9|KAD_AGRRK 11 224 evalue:1.9e-68 qcov:94.70 identity:58.40;
tigrfam_acc TIGR01351;
tigrfam_desc adenylate kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name adk;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01351 evalue:4.3e-74 score:247.9 best_domain_score:247.7 name:TIGR01351;
26748 27002 CDS
ID metaerg.pl|12226
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468623.1 1 84 evalue:9.2e-38 qcov:100.00 identity:94.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF13937;
pfam_desc Domain of unknown function (DUF4212);
pfam_id DUF4212;
pfam_target db:Pfam-A.hmm|PF13937.6 evalue:4.8e-31 score:106.2 best_domain_score:106.1 name:DUF4212;
tigrfam_acc TIGR03647;
tigrfam_desc putative solute:sodium symporter small subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name Na_symport_sm;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR03647 evalue:1.7e-30 score:104.3 best_domain_score:104.1 name:TIGR03647;
tm_num 2;
26748 27002 transmembrane_helix
ID metaerg.pl|12227
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology i26784-26852o26895-26954i;
27014 28795 CDS
ID metaerg.pl|12228
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0015293; GO:0006814;
allko_ids K14393;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468624.1 1 593 evalue:1.7e-308 qcov:100.00 identity:93.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00474;
pfam_desc Sodium:solute symporter family;
pfam_id SSF;
pfam_target db:Pfam-A.hmm|PF00474.17 evalue:2.9e-52 score:177.1 best_domain_score:124.7 name:SSF;
sprot_desc Uncharacterized symporter H16_A2524;
sprot_id sp|P31640|Y2524_CUPNH;
sprot_target db:uniprot_sprot|sp|P31640|Y2524_CUPNH 2 582 evalue:4.8e-79 qcov:98.00 identity:31.90;
tigrfam_acc TIGR03648;
tigrfam_desc probable sodium:solute symporter, VC_2705 subfamily;
tigrfam_name Na_symport_lg;
tigrfam_target db:TIGRFAMs.hmm|TIGR03648 evalue:4.7e-240 score:796.8 best_domain_score:796.6 name:TIGR03648;
tm_num 12;
27014 28795 transmembrane_helix
ID metaerg.pl|12229
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology i27026-27094o27239-27298i27359-27427o27470-27538i27557-27616o27752-27820i27857-27925o28199-28267i28328-28384o28412-28480i28517-28576o28619-28687i;
28880 30706 CDS
ID metaerg.pl|12230
allgo_ids GO:0008773;
allko_ids K00088; K00641; K05847; K02806; K00966; K00970; K00974; K01697; K02000; K11527; K00031;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468625.1 1 608 evalue:1.6e-310 qcov:100.00 identity:88.20;
kegg_pathway_id 00983; 00720; 00271; 00920; 00480; 00020; 00230; 00260; 02010; 02060; 00051; 00450;
kegg_pathway_name Drug metabolism - other enzymes; Reductive carboxylate cycle (CO2 fixation); Methionine metabolism; Sulfur metabolism; Glutathione metabolism; Citrate cycle (TCA cycle); Purine metabolism; Glycine, serine and threonine metabolism; ABC transporters - General; Phosphotransferase system (PTS); Fructose and mannose metabolism; Selenoamino acid metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00571; PF00027; PF03445; PF10335;
pfam_desc CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294; Putative nucleotidyltransferase substrate binding domain;
pfam_id CBS; cNMP_binding; DUF294; DUF294_C;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:9.9e-30 score:102.0 best_domain_score:54.9 name:CBS; db:Pfam-A.hmm|PF00027.29 evalue:1.3e-16 score:59.6 best_domain_score:58.5 name:cNMP_binding; db:Pfam-A.hmm|PF03445.13 evalue:1e-44 score:150.9 best_domain_score:150.3 name:DUF294; db:Pfam-A.hmm|PF10335.9 evalue:4.3e-43 score:145.8 best_domain_score:145.0 name:DUF294_C;
30722 31270 CDS
ID metaerg.pl|12231
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795642.1 1 180 evalue:6.3e-84 qcov:98.90 identity:84.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
tm_num 2;
30722 31270 transmembrane_helix
ID metaerg.pl|12232
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology o30731-30799i30818-30886o;
31245 31667 CDS
ID metaerg.pl|12233
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0000156; GO:0006817; GO:0006355;
allko_ids K11711; K07642; K02484; K00760; K11356; K11640; K07645; K07708; K07677; K07704; K10909; K08282; K01937; K11231; K02491; K07654; K07682; K03407; K07637; K07646; K07641; K01120; K07673; K07639; K08475; K07652; K11354; K07778; K07768; K07711; K02478; K07679; K07648; K07651; K10681; K07676; K06379; K07709; K07644; K13761; K11383; K02486; K12767; K07769; K04757; K11357; K10125; K07647; K07717; K07675; K02668; K03388; K08479; K10916; K02489; K07716; K07710; K01768; K02482; K02480; K07653; K07636; K02030; K11527; K07678; K10715; K07657;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795641.1 1 140 evalue:7.0e-59 qcov:100.00 identity:85.70;
kegg_pathway_id 03090; 04011; 02020; 00790; 00983; 00240; 00230; 05111;
kegg_pathway_name Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General; Folate biosynthesis; Drug metabolism - other enzymes; Pyrimidine metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:2.5e-26 score:91.3 best_domain_score:91.1 name:Response_reg;
sprot_desc Phosphate regulon transcriptional regulatory protein PhoB;
sprot_id sp|Q52990|PHOB_RHIME;
sprot_target db:uniprot_sprot|sp|Q52990|PHOB_RHIME 9 125 evalue:6.9e-21 qcov:83.60 identity:44.40;
31660 33747 CDS
ID metaerg.pl|12234
allec_ids 2.7.7.7;
allgo_ids GO:0003676; GO:0006139; GO:0008408; GO:0003677; GO:0003887; GO:0006260;
allko_ids K03763; K02337; K02342; K01769;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:2.3e-43 score:147.3 best_domain_score:146.7 name:DEDDh;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795640.1 1 695 evalue:0.0e+00 qcov:100.00 identity:83.00;
kegg_pathway_id 03030; 00230;
kegg_pathway_name DNA replication; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF01612; PF08448; PF00929;
pfam_desc 3'-5' exonuclease; PAS fold; Exonuclease;
pfam_id DNA_pol_A_exo1; PAS_4; RNase_T;
pfam_target db:Pfam-A.hmm|PF01612.20 evalue:8.6e-06 score:24.8 best_domain_score:13.7 name:DNA_pol_A_exo1; db:Pfam-A.hmm|PF08448.10 evalue:3e-05 score:23.4 best_domain_score:21.8 name:PAS_4; db:Pfam-A.hmm|PF00929.24 evalue:7.1e-36 score:123.5 best_domain_score:122.9 name:RNase_T;
sprot_desc DNA polymerase III subunit epsilon-like protein;
sprot_id sp|O68045|DPO3E_RHOCB;
sprot_target db:uniprot_sprot|sp|O68045|DPO3E_RHOCB 2 695 evalue:1.6e-182 qcov:99.90 identity:51.70;
tigrfam_acc TIGR00573;
tigrfam_desc exonuclease, DNA polymerase III, epsilon subunit family;
tigrfam_mainrole DNA metabolism;
tigrfam_name dnaq;
tigrfam_sub1role Degradation of DNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00573 evalue:9.6e-33 score:112.6 best_domain_score:112.1 name:TIGR00573;
tm_num 2;
31660 33747 transmembrane_helix
ID metaerg.pl|12235
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology i31693-31761o31804-31863i;
33831 35537 CDS
ID metaerg.pl|12236
allko_ids K01768; K04486;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795639.1 1 568 evalue:1.5e-192 qcov:100.00 identity:62.10;
kegg_pathway_id 00340; 00230;
kegg_pathway_name Histidine metabolism; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF12860; PF13188;
pfam_desc PAS fold; PAS domain;
pfam_id PAS_7; PAS_8;
pfam_target db:Pfam-A.hmm|PF12860.7 evalue:8.2e-14 score:51.0 best_domain_score:40.1 name:PAS_7; db:Pfam-A.hmm|PF13188.7 evalue:1.6e-06 score:27.2 best_domain_score:8.7 name:PAS_8;
tm_num 1;
33831 35537 transmembrane_helix
ID metaerg.pl|12237
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology i33843-33911o;
35604 36113 CDS
ID metaerg.pl|12238
allgo_ids GO:0002949; GO:0005737; GO:0005524; GO:0046872;
allko_ids K06925;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795638.1 8 159 evalue:2.2e-46 qcov:89.90 identity:60.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF02367;
pfam_desc Threonylcarbamoyl adenosine biosynthesis protein TsaE;
pfam_id TsaE;
pfam_target db:Pfam-A.hmm|PF02367.17 evalue:5.8e-31 score:106.3 best_domain_score:105.7 name:TsaE;
sprot_desc tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;
sprot_id sp|Q1RGZ7|TSAE_RICBR;
sprot_target db:uniprot_sprot|sp|Q1RGZ7|TSAE_RICBR 13 132 evalue:1.6e-19 qcov:71.00 identity:38.30;
tigrfam_acc TIGR00150;
tigrfam_desc tRNA threonylcarbamoyl adenosine modification protein YjeE;
tigrfam_mainrole Protein synthesis;
tigrfam_name T6A_YjeE;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00150 evalue:7.5e-23 score:80.0 best_domain_score:79.7 name:TIGR00150;
36103 39039 CDS
ID metaerg.pl|12239
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795637.1 1 976 evalue:0.0e+00 qcov:99.80 identity:80.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF12705;
pfam_desc PD-(D/E)XK nuclease superfamily;
pfam_id PDDEXK_1;
pfam_target db:Pfam-A.hmm|PF12705.7 evalue:3.7e-22 score:78.7 best_domain_score:77.6 name:PDDEXK_1;
tigrfam_acc TIGR02786;
tigrfam_desc double-strand break repair protein AddB;
tigrfam_mainrole DNA metabolism;
tigrfam_name addB_alphas;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02786 evalue:3.3e-251 score:835.7 best_domain_score:831.1 name:TIGR02786;
39026 42376 CDS
ID metaerg.pl|12240
allec_ids 3.1.-.-;
allgo_ids GO:0005524; GO:0008408; GO:0004003; GO:0003690; GO:0000724;
allko_ids K16898;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657452.1 1 1116 evalue:0.0e+00 qcov:100.00 identity:79.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF13245; PF12705; PF00580; PF13361; PF13538;
pfam_desc AAA domain; PD-(D/E)XK nuclease superfamily; UvrD/REP helicase N-terminal domain; UvrD-like helicase C-terminal domain; UvrD-like helicase C-terminal domain;
pfam_id AAA_19; PDDEXK_1; UvrD-helicase; UvrD_C; UvrD_C_2;
pfam_target db:Pfam-A.hmm|PF13245.6 evalue:3.6e-22 score:78.5 best_domain_score:76.5 name:AAA_19; db:Pfam-A.hmm|PF12705.7 evalue:1.8e-08 score:33.8 best_domain_score:32.3 name:PDDEXK_1; db:Pfam-A.hmm|PF00580.21 evalue:1.1e-50 score:172.2 best_domain_score:170.1 name:UvrD-helicase; db:Pfam-A.hmm|PF13361.6 evalue:6e-17 score:61.3 best_domain_score:44.6 name:UvrD_C; db:Pfam-A.hmm|PF13538.6 evalue:5.8e-13 score:47.7 best_domain_score:23.8 name:UvrD_C_2;
sprot_desc ATP-dependent helicase/nuclease subunit A;
sprot_id sp|B1I493|ADDA_DESAP;
sprot_target db:uniprot_sprot|sp|B1I493|ADDA_DESAP 22 852 evalue:3.8e-37 qcov:74.50 identity:27.90;
tigrfam_acc TIGR02784;
tigrfam_desc double-strand break repair helicase AddA;
tigrfam_mainrole DNA metabolism;
tigrfam_name addA_alphas;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02784 evalue:0 score:1220.6 best_domain_score:1220.4 name:TIGR02784;
42412 42732 CDS
ID metaerg.pl|12241
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005623; GO:0015035; GO:0045454; GO:0006662;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795636.1 1 106 evalue:6.3e-52 qcov:100.00 identity:97.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00578; PF00085; PF13098; PF13905;
pfam_desc AhpC/TSA family; Thioredoxin; Thioredoxin-like domain; Thioredoxin-like;
pfam_id AhpC-TSA; Thioredoxin; Thioredoxin_2; Thioredoxin_8;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:8.5e-07 score:28.2 best_domain_score:28.0 name:AhpC-TSA; db:Pfam-A.hmm|PF00085.20 evalue:2e-34 score:116.9 best_domain_score:116.8 name:Thioredoxin; db:Pfam-A.hmm|PF13098.6 evalue:2e-08 score:33.9 best_domain_score:32.2 name:Thioredoxin_2; db:Pfam-A.hmm|PF13905.6 evalue:1.1e-06 score:28.1 best_domain_score:26.5 name:Thioredoxin_8;
sprot_desc Thioredoxin;
sprot_id sp|P08058|THIO_RHOSH;
sprot_target db:uniprot_sprot|sp|P08058|THIO_RHOSH 1 106 evalue:9.9e-44 qcov:100.00 identity:75.50;
tigrfam_acc TIGR01068;
tigrfam_desc thioredoxin;
tigrfam_mainrole Energy metabolism;
tigrfam_name thioredoxin;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01068 evalue:1e-37 score:127.5 best_domain_score:127.3 name:TIGR01068;
42838 43389 CDS
ID metaerg.pl|12242
allec_ids 3.4.25.2;
allgo_ids GO:0004298; GO:0005839; GO:0051603; GO:0009376; GO:0046872;
allko_ids K01419;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795635.1 1 181 evalue:1.8e-91 qcov:98.90 identity:96.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00227;
pfam_desc Proteasome subunit;
pfam_id Proteasome;
pfam_target db:Pfam-A.hmm|PF00227.26 evalue:5.3e-26 score:90.5 best_domain_score:88.3 name:Proteasome;
sprot_desc ATP-dependent protease subunit HslV;
sprot_id sp|Q16CY0|HSLV_ROSDO;
sprot_target db:uniprot_sprot|sp|Q16CY0|HSLV_ROSDO 3 181 evalue:6.2e-86 qcov:97.80 identity:88.80;
tigrfam_acc TIGR03692;
tigrfam_desc ATP-dependent protease HslVU, peptidase subunit;
tigrfam_mainrole Protein fate;
tigrfam_name ATP_dep_HslV;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR03692 evalue:1.9e-78 score:261.2 best_domain_score:261.1 name:TIGR03692;
43386 44690 CDS
ID metaerg.pl|12243
allgo_ids GO:0005524; GO:0009376; GO:0016887; GO:0070011; GO:0043335;
allko_ids K03667;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795634.1 1 434 evalue:5.7e-224 qcov:100.00 identity:94.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00004; PF07724; PF07728; PF05496;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); AAA domain (dynein-related subfamily); Holliday junction DNA helicase RuvB P-loop domain;
pfam_id AAA; AAA_2; AAA_5; RuvB_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:3.6e-14 score:52.5 best_domain_score:24.9 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:2.4e-46 score:157.2 best_domain_score:131.7 name:AAA_2; db:Pfam-A.hmm|PF07728.14 evalue:6.4e-08 score:31.9 best_domain_score:23.2 name:AAA_5; db:Pfam-A.hmm|PF05496.12 evalue:8.2e-06 score:24.9 best_domain_score:14.4 name:RuvB_N;
sprot_desc ATP-dependent protease ATPase subunit HslU;
sprot_id sp|Q16CY2|HSLU_ROSDO;
sprot_target db:uniprot_sprot|sp|Q16CY2|HSLU_ROSDO 1 434 evalue:4.4e-191 qcov:100.00 identity:80.50;
tigrfam_acc TIGR00390;
tigrfam_desc ATP-dependent protease HslVU, ATPase subunit;
tigrfam_mainrole Protein fate;
tigrfam_name hslU;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR00390 evalue:2.6e-183 score:609.2 best_domain_score:608.7 name:TIGR00390;
44761 45117 CDS
ID metaerg.pl|12244
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468367.1 1 118 evalue:4.3e-57 qcov:100.00 identity:93.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF01883;
pfam_desc Iron-sulfur cluster assembly protein;
pfam_id FeS_assembly_P;
pfam_target db:Pfam-A.hmm|PF01883.19 evalue:1.6e-18 score:65.8 best_domain_score:65.5 name:FeS_assembly_P;
sprot_desc Fe-S protein maturation auxiliary factor YitW;
sprot_id sp|P70949|SUFT_BACSU;
sprot_target db:uniprot_sprot|sp|P70949|SUFT_BACSU 18 116 evalue:4.2e-11 qcov:83.90 identity:35.40;
tigrfam_acc TIGR02945;
tigrfam_desc FeS assembly SUF system protein;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name SUF_assoc;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02945 evalue:4.2e-43 score:144.9 best_domain_score:144.8 name:TIGR02945;
45117 45674 CDS
ID metaerg.pl|12245
allec_ids 2.3.1.79;
allgo_ids GO:0016407; GO:0005829; GO:0008925;
allko_ids K00677; K00661;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084635146.1 11 185 evalue:2.9e-76 qcov:94.60 identity:81.70;
kegg_pathway_id 00540;
kegg_pathway_name Lipopolysaccharide biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00132; PF14602; PF12464;
pfam_desc Bacterial transferase hexapeptide (six repeats); Hexapeptide repeat of succinyl-transferase; Maltose acetyltransferase;
pfam_id Hexapep; Hexapep_2; Mac;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:1.9e-11 score:42.5 best_domain_score:38.3 name:Hexapep; db:Pfam-A.hmm|PF14602.6 evalue:1.1e-08 score:33.9 best_domain_score:31.2 name:Hexapep_2; db:Pfam-A.hmm|PF12464.8 evalue:2.2e-13 score:49.5 best_domain_score:48.9 name:Mac;
sprot_desc Probable maltose O-acetyltransferase;
sprot_id sp|P37515|MAA_BACSU;
sprot_target db:uniprot_sprot|sp|P37515|MAA_BACSU 6 182 evalue:1.4e-37 qcov:95.70 identity:52.80;
45677 46069 CDS
ID metaerg.pl|12246
allgo_ids GO:0051536; GO:0005198; GO:0009399; GO:0097428;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246738.1 1 130 evalue:1.8e-61 qcov:100.00 identity:90.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF01521;
pfam_desc Iron-sulphur cluster biosynthesis;
pfam_id Fe-S_biosyn;
pfam_target db:Pfam-A.hmm|PF01521.20 evalue:1e-19 score:70.0 best_domain_score:69.6 name:Fe-S_biosyn;
sprot_desc hypothetical protein;
sprot_id sp|P46053|HESB_LEPBY;
sprot_target db:uniprot_sprot|sp|P46053|HESB_LEPBY 10 115 evalue:9.6e-17 qcov:81.50 identity:37.30;
tigrfam_acc TIGR00049;
tigrfam_desc iron-sulfur cluster assembly accessory protein;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00049;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00049 evalue:2.8e-32 score:110.2 best_domain_score:110.0 name:TIGR00049;
46124 46858 CDS
ID metaerg.pl|12247
allec_ids 5.3.1.1;
allgo_ids GO:0004807; GO:0005737; GO:0006094; GO:0006096;
allko_ids K01803;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795631.1 1 244 evalue:5.1e-105 qcov:100.00 identity:83.60;
kegg_pathway_id 00710; 00051; 00010;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Fructose and mannose metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id P185-PWY; PHOTOALL-PWY; GLYCOLYSIS; GLYCOLYSIS-E-D; PWY-6146; GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAGLYCOLYSIS-PWY; PWY-5464; P441-PWY; PWY-1042; PWY-3801; ANAEROFRUCAT-PWY; P341-PWY; PWY-6142; CALVIN-PWY; PWY-5484; PWY66-373; P461-PWY;
metacyc_pathway_name formaldehyde assimilation III (dihydroxyacetone cycle);; oxygenic photosynthesis;; glycolysis I (from glucose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of N-acetylneuraminate degradation;; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);; homolactic fermentation;; glycolysis V (Pyrococcus);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; Calvin-Benson-Bassham cycle;; glycolysis II (from fructose 6-phosphate);; sucrose degradation V (sucrose α-glucosidase);; hexitol fermentation to lactate, formate, ethanol and acetate;;
metacyc_pathway_type Formaldehyde-Assimilation;; Photosynthesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Fermentation-to-Lactate; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;;
pfam_acc PF00121;
pfam_desc Triosephosphate isomerase;
pfam_id TIM;
pfam_target db:Pfam-A.hmm|PF00121.18 evalue:1.2e-70 score:236.9 best_domain_score:236.7 name:TIM;
sprot_desc Triosephosphate isomerase;
sprot_id sp|Q28RL2|TPIS_JANSC;
sprot_target db:uniprot_sprot|sp|Q28RL2|TPIS_JANSC 4 244 evalue:3.0e-80 qcov:98.80 identity:68.00;
tigrfam_acc TIGR00419;
tigrfam_desc triose-phosphate isomerase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tim;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00419 evalue:2.5e-49 score:167.3 best_domain_score:167.1 name:TIGR00419;
47573 46887 CDS
ID metaerg.pl|12248
allgo_ids GO:0004252; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657451.1 5 227 evalue:1.3e-94 qcov:97.80 identity:78.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF01694;
pfam_desc Rhomboid family;
pfam_id Rhomboid;
pfam_target db:Pfam-A.hmm|PF01694.22 evalue:2.2e-30 score:104.9 best_domain_score:104.3 name:Rhomboid;
tm_num 6;
47573 46887 transmembrane_helix
ID metaerg.pl|12249
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology i46971-47039o47160-47228i47247-47306o47316-47384i47421-47489o47499-47558i;
48331 47630 CDS
ID metaerg.pl|12250
allgo_ids GO:0016021; GO:0005886; GO:0016740; GO:0000271;
allko_ids K16566;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657450.1 1 233 evalue:9.9e-82 qcov:100.00 identity:65.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF02397;
pfam_desc Bacterial sugar transferase;
pfam_id Bac_transf;
pfam_target db:Pfam-A.hmm|PF02397.16 evalue:1.2e-54 score:184.0 best_domain_score:183.7 name:Bac_transf;
sprot_desc Exopolysaccharide production protein ExoY;
sprot_id sp|P14186|EXOY_SINFN;
sprot_target db:uniprot_sprot|sp|P14186|EXOY_SINFN 19 232 evalue:6.1e-38 qcov:91.80 identity:40.80;
tm_num 1;
48331 47630 transmembrane_helix
ID metaerg.pl|12251
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology i47756-47824o;
48717 49583 CDS
ID metaerg.pl|12252
allgo_ids GO:0005737; GO:0005886; GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795629.1 9 287 evalue:1.8e-138 qcov:96.90 identity:89.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF13401; PF02492; PF09848; PF05621;
pfam_desc AAA domain; CobW/HypB/UreG, nucleotide-binding domain; Uncharacterized conserved protein (DUF2075); Bacterial TniB protein;
pfam_id AAA_22; cobW; DUF2075; TniB;
pfam_target db:Pfam-A.hmm|PF13401.6 evalue:3.3e-20 score:72.0 best_domain_score:71.3 name:AAA_22; db:Pfam-A.hmm|PF02492.19 evalue:3.5e-05 score:22.7 best_domain_score:21.3 name:cobW; db:Pfam-A.hmm|PF09848.9 evalue:1.2e-05 score:23.9 best_domain_score:23.7 name:DUF2075; db:Pfam-A.hmm|PF05621.11 evalue:7.7e-06 score:24.7 best_domain_score:24.0 name:TniB;
sprot_desc General secretion pathway protein A;
sprot_id sp|P45754|GSPA_AERHY;
sprot_target db:uniprot_sprot|sp|P45754|GSPA_AERHY 16 266 evalue:8.6e-42 qcov:87.20 identity:36.60;
50010 49588 CDS
ID metaerg.pl|12253
allec_ids 4.4.1.5;
allgo_ids GO:0004462; GO:0046872;
allko_ids K01759;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795628.1 1 140 evalue:1.8e-70 qcov:100.00 identity:89.30;
kegg_pathway_id 04011; 00620;
kegg_pathway_name MAPK signaling pathway - yeast; Pyruvate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id METHGLYUT-PWY; PWY-5386;
metacyc_pathway_name superpathway of methylglyoxal degradation;; methylglyoxal degradation I;;
metacyc_pathway_type Aldehyde-Degradation; Super-Pathways;; Methylglyoxal-Detoxification;;
pfam_acc PF00903; PF13669;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase; Glyoxalase_4;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:1.7e-12 score:46.8 best_domain_score:46.6 name:Glyoxalase; db:Pfam-A.hmm|PF13669.6 evalue:6.8e-13 score:48.1 best_domain_score:45.1 name:Glyoxalase_4;
sprot_desc Lactoylglutathione lyase;
sprot_id sp|P0A1Q3|LGUL_SALTI;
sprot_target db:uniprot_sprot|sp|P0A1Q3|LGUL_SALTI 1 124 evalue:1.7e-11 qcov:88.60 identity:34.40;
50131 50910 CDS
ID metaerg.pl|12254
allec_ids 2.1.1.45;
allgo_ids GO:0005737; GO:0004799; GO:0006231; GO:0006235;
allko_ids K00560;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795627.1 1 259 evalue:8.8e-140 qcov:100.00 identity:91.90;
kegg_pathway_id 00240; 00670;
kegg_pathway_name Pyrimidine metabolism; One carbon pool by folate;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id P1-PWY; PWY0-166; PWY-3841; 1CMET2-PWY;
metacyc_pathway_name ; superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);; folate transformations II;; N10-formyl-tetrahydrofolate biosynthesis;;
metacyc_pathway_type ; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;; Folate-Transformations;; Folate-Biosynthesis;;
pfam_acc PF00303;
pfam_desc Thymidylate synthase;
pfam_id Thymidylat_synt;
pfam_target db:Pfam-A.hmm|PF00303.19 evalue:9.1e-118 score:391.4 best_domain_score:391.3 name:Thymidylat_synt;
sprot_desc Thymidylate synthase;
sprot_id sp|Q1GFV4|TYSY_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GFV4|TYSY_RUEST 1 259 evalue:6.4e-113 qcov:100.00 identity:70.40;
tigrfam_acc TIGR03284;
tigrfam_desc thymidylate synthase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name thym_sym;
tigrfam_sub1role 2'-Deoxyribonucleotide metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR03284 evalue:3.3e-123 score:409.7 best_domain_score:278.6 name:TIGR03284;
50911 51393 CDS
ID metaerg.pl|12255
allec_ids 1.5.1.3;
allgo_ids GO:0004146; GO:0046654; GO:0055114; GO:0050661; GO:0006545; GO:0006730; GO:0046677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468360.1 1 159 evalue:1.9e-63 qcov:99.40 identity:74.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id ALL-CHORISMATE-PWY; 1CMET2-PWY; FOLSYN-PWY; PWY-6548; PWY-3841;
metacyc_pathway_name superpathway of chorismate metabolism;; N10-formyl-tetrahydrofolate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; ; folate transformations II;;
metacyc_pathway_type Super-Pathways;; Folate-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; ; Folate-Transformations;;
pfam_acc PF00186;
pfam_desc Dihydrofolate reductase;
pfam_id DHFR_1;
pfam_target db:Pfam-A.hmm|PF00186.19 evalue:3e-46 score:156.3 best_domain_score:156.1 name:DHFR_1;
sprot_desc Dihydrofolate reductase;
sprot_id sp|P04174|DYR_NEIGO;
sprot_target db:uniprot_sprot|sp|P04174|DYR_NEIGO 2 158 evalue:3.8e-23 qcov:98.10 identity:43.40;
51464 51781 CDS
ID metaerg.pl|12256
allgo_ids GO:0044238;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795625.1 1 105 evalue:1.7e-41 qcov:100.00 identity:84.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF02482;
pfam_desc Sigma 54 modulation protein / S30EA ribosomal protein;
pfam_id Ribosomal_S30AE;
pfam_target db:Pfam-A.hmm|PF02482.19 evalue:9.3e-07 score:28.8 best_domain_score:28.7 name:Ribosomal_S30AE;
51993 52436 CDS
ID metaerg.pl|12257
allgo_ids GO:0007155; GO:0009289;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_100319196.1 1 147 evalue:2.8e-50 qcov:100.00 identity:70.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF07012;
pfam_desc Curlin associated repeat;
pfam_id Curlin_rpt;
pfam_target db:Pfam-A.hmm|PF07012.12 evalue:2.2e-15 score:55.6 best_domain_score:33.6 name:Curlin_rpt;
sp YES;
51993 52073 signal_peptide
ID metaerg.pl|12258
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
52475 52858 CDS
ID metaerg.pl|12259
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795618.1 6 127 evalue:3.3e-31 qcov:96.10 identity:59.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
sp YES;
52475 52525 lipoprotein_signal_peptide
ID metaerg.pl|12260
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
52888 53274 CDS
ID metaerg.pl|12261
allgo_ids GO:0007155; GO:0009289;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795617.1 2 128 evalue:8.7e-40 qcov:99.20 identity:70.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF07012;
pfam_desc Curlin associated repeat;
pfam_id Curlin_rpt;
pfam_target db:Pfam-A.hmm|PF07012.12 evalue:7.4e-11 score:41.1 best_domain_score:23.2 name:Curlin_rpt;
sp YES;
52888 52950 signal_peptide
ID metaerg.pl|12262
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
53348 55147 CDS
ID metaerg.pl|12263
allec_ids 7.5.2.6;
allgo_ids GO:0005524; GO:0016021; GO:0042626; GO:0055085; GO:0005886; GO:0016887; GO:0034040;
allko_ids K10111; K01995; K02023; K02000; K02052; K02006; K05847; K01996; K06861; K02071; K02045; K11085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657449.1 34 599 evalue:2.6e-259 qcov:94.50 identity:84.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00664; PF00005;
pfam_desc ABC transporter transmembrane region; ABC transporter;
pfam_id ABC_membrane; ABC_tran;
pfam_target db:Pfam-A.hmm|PF00664.23 evalue:1.9e-35 score:122.1 best_domain_score:121.5 name:ABC_membrane; db:Pfam-A.hmm|PF00005.27 evalue:3.4e-30 score:104.6 best_domain_score:103.8 name:ABC_tran;
sprot_desc Lipid A export ATP-binding/permease protein MsbA;
sprot_id sp|Q2LVL0|MSBA_SYNAS;
sprot_target db:uniprot_sprot|sp|Q2LVL0|MSBA_SYNAS 37 592 evalue:3.9e-89 qcov:92.80 identity:34.40;
tm_num 5;
53348 55147 transmembrane_helix
ID metaerg.pl|12264
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology i53447-53515o53558-53611i53630-53698o53870-53938i54107-54175o;
56601 55129 CDS
ID metaerg.pl|12265
allgo_ids GO:0006281;
allko_ids K14161;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468350.1 1 490 evalue:5.2e-218 qcov:100.00 identity:77.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00817;
pfam_desc impB/mucB/samB family;
pfam_id IMS;
pfam_target db:Pfam-A.hmm|PF00817.20 evalue:1.1e-09 score:37.7 best_domain_score:37.2 name:IMS;
sprot_desc hypothetical protein;
sprot_id sp|Q9A3J2|IMUB_CAUVC;
sprot_target db:uniprot_sprot|sp|Q9A3J2|IMUB_CAUVC 51 489 evalue:2.2e-77 qcov:89.60 identity:42.40;
56737 57696 CDS
ID metaerg.pl|12266
allec_ids 2.1.3.15; 6.4.1.2;
allgo_ids GO:0003989; GO:0006633; GO:0009317; GO:0005524; GO:0016743; GO:2001295;
allko_ids K01962;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468349.1 1 319 evalue:2.9e-161 qcov:100.00 identity:90.00;
kegg_pathway_id 00620; 00253; 00061; 00640;
kegg_pathway_name Pyruvate metabolism; Tetracycline biosynthesis; Fatty acid biosynthesis; Propanoate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metacyc_pathway_id PWY-4381; PWY0-881; PWY-6285; PWY-6113; FASYN-INITIAL-PWY; PWY-5743; PWY-5156; PWY0-1264; PWY-5789;
metacyc_pathway_name fatty acid biosynthesis initiation I;; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; 3-hydroxypropanoate cycle;; superpathway of fatty acid biosynthesis II (plant);; biotin-carboxyl carrier protein assembly;; 3-hydroxypropanoate/4-hydroxybutanate cycle;;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;; Fatty-acid-biosynthesis; Super-Pathways;; Lipid-Biosynthesis;; Autotrophic-CO2-Fixation;;
pfam_acc PF03255; PF01039; PF06833;
pfam_desc Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; Carboxyl transferase domain; Malonate decarboxylase gamma subunit (MdcE);
pfam_id ACCA; Carboxyl_trans; MdcE;
pfam_target db:Pfam-A.hmm|PF03255.14 evalue:8.7e-57 score:190.3 best_domain_score:189.6 name:ACCA; db:Pfam-A.hmm|PF01039.22 evalue:1.2e-20 score:72.8 best_domain_score:72.6 name:Carboxyl_trans; db:Pfam-A.hmm|PF06833.11 evalue:3.1e-08 score:32.6 best_domain_score:32.1 name:MdcE;
sprot_desc Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha;
sprot_id sp|A4WVF3|ACCA_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WVF3|ACCA_RHOS5 1 319 evalue:8.4e-139 qcov:100.00 identity:77.70;
tigrfam_acc TIGR00513;
tigrfam_desc acetyl-CoA carboxylase, carboxyl transferase, alpha subunit;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name accA;
tigrfam_sub1role Biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00513 evalue:1.5e-126 score:421.3 best_domain_score:421.0 name:TIGR00513;
57717 58124 CDS
ID metaerg.pl|12267
allko_ids K06957;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Porphyrobacter_A;s__Porphyrobacter_A sp001427865;
genomedb_acc GCF_001427865.1;
genomedb_target db:genomedb|GCF_001427865.1|WP_055924162.1 1 135 evalue:2.9e-41 qcov:100.00 identity:63.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00583; PF13673; PF13508;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:4.2e-09 score:35.9 best_domain_score:35.7 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:1.1e-11 score:44.0 best_domain_score:43.8 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:3.3e-09 score:36.3 best_domain_score:35.8 name:Acetyltransf_7;
59608 58556 CDS
ID metaerg.pl|12268
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657448.1 1 337 evalue:7.1e-84 qcov:96.30 identity:52.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF13238;
pfam_desc AAA domain;
pfam_id AAA_18;
pfam_target db:Pfam-A.hmm|PF13238.6 evalue:3.9e-08 score:33.1 best_domain_score:32.0 name:AAA_18;
59814 60503 CDS
ID metaerg.pl|12269
allgo_ids GO:0008146;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795614.1 1 229 evalue:1.2e-84 qcov:100.00 identity:65.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00685; PF13469;
pfam_desc Sulfotransferase domain; Sulfotransferase family;
pfam_id Sulfotransfer_1; Sulfotransfer_3;
pfam_target db:Pfam-A.hmm|PF00685.27 evalue:2.4e-06 score:26.5 best_domain_score:22.1 name:Sulfotransfer_1; db:Pfam-A.hmm|PF13469.6 evalue:2.1e-13 score:50.4 best_domain_score:49.8 name:Sulfotransfer_3;
60493 64737 CDS
ID metaerg.pl|12270
allgo_ids GO:0006486; GO:0008378; GO:0016020;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657447.1 12 1393 evalue:0.0e+00 qcov:97.70 identity:55.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF01762; PF13704;
pfam_desc Galactosyltransferase; Glycosyl transferase family 2;
pfam_id Galactosyl_T; Glyco_tranf_2_4;
pfam_target db:Pfam-A.hmm|PF01762.21 evalue:3.1e-07 score:29.6 best_domain_score:28.8 name:Galactosyl_T; db:Pfam-A.hmm|PF13704.6 evalue:5.7e-19 score:67.7 best_domain_score:66.1 name:Glyco_tranf_2_4;
65843 64809 CDS
ID metaerg.pl|12271
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795612.1 1 342 evalue:1.0e-143 qcov:99.40 identity:75.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF01266;
pfam_desc FAD dependent oxidoreductase;
pfam_id DAO;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:2.6e-35 score:121.9 best_domain_score:120.0 name:DAO;
tm_num 1;
65843 64809 transmembrane_helix
ID metaerg.pl|12272
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology o64818-64886i;
65903 66556 CDS
ID metaerg.pl|12273
allec_ids 2.1.1.61; 1.5.-.-;
allgo_ids GO:0016645; GO:0055114; GO:0005737; GO:0050660; GO:0004808; GO:0002097;
allko_ids K15461;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795611.1 1 214 evalue:5.9e-97 qcov:98.60 identity:80.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF05430;
pfam_desc S-adenosyl-L-methionine-dependent methyltransferase;
pfam_id Methyltransf_30;
pfam_target db:Pfam-A.hmm|PF05430.11 evalue:4.4e-38 score:129.2 best_domain_score:128.7 name:Methyltransf_30;
sprot_desc tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC;
sprot_id sp|Q7NWN9|MNMC_CHRVO;
sprot_target db:uniprot_sprot|sp|Q7NWN9|MNMC_CHRVO 1 214 evalue:1.4e-47 qcov:98.60 identity:46.80;
66553 67422 CDS
ID metaerg.pl|12274
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480290.1 1 286 evalue:2.2e-139 qcov:99.00 identity:90.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:3e-18 score:65.6 best_domain_score:37.1 name:EamA;
tm_num 10;
66553 67422 transmembrane_helix
ID metaerg.pl|12275
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology i66571-66630o66658-66717i66778-66846o66859-66927i66940-66993o67006-67074i67093-67152o67180-67236i67273-67329o67342-67410i;
67484 68986 CDS
ID metaerg.pl|12276
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795609.1 1 500 evalue:4.2e-247 qcov:100.00 identity:87.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF01564;
pfam_desc Spermine/spermidine synthase domain;
pfam_id Spermine_synth;
pfam_target db:Pfam-A.hmm|PF01564.17 evalue:1.5e-05 score:23.7 best_domain_score:22.8 name:Spermine_synth;
sp YES;
tm_num 7;
67484 67531 signal_peptide
ID metaerg.pl|12277
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
67484 68986 transmembrane_helix
ID metaerg.pl|12278
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology i67496-67564o67592-67660i67697-67765o67793-67861i67922-67990o68000-68068i68087-68155o;
70342 69080 CDS
ID metaerg.pl|12279
allec_ids 1.8.2.3;
allgo_ids GO:0016491; GO:0050660; GO:0055114; GO:0042597;
allko_ids K00356; K03885; K17229;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795608.1 1 420 evalue:1.3e-220 qcov:100.00 identity:89.80;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF09242; PF13454; PF07992;
pfam_desc Flavocytochrome c sulphide dehydrogenase, flavin-binding; FAD-NAD(P)-binding; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id FCSD-flav_bind; NAD_binding_9; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF09242.11 evalue:4e-20 score:71.2 best_domain_score:70.0 name:FCSD-flav_bind; db:Pfam-A.hmm|PF13454.6 evalue:2.4e-05 score:23.6 best_domain_score:9.3 name:NAD_binding_9; db:Pfam-A.hmm|PF07992.14 evalue:6.8e-12 score:44.4 best_domain_score:39.1 name:Pyr_redox_2;
sp YES;
sprot_desc Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain;
sprot_id sp|Q06530|DHSU_ALLVD;
sprot_target db:uniprot_sprot|sp|Q06530|DHSU_ALLVD 1 420 evalue:4.1e-85 qcov:100.00 identity:41.50;
69080 69157 signal_peptide
ID metaerg.pl|12280
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
71258 70539 CDS
ID metaerg.pl|12281
allgo_ids GO:0009055; GO:0020037;
allko_ids K02305; K00428; K05301;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795607.1 11 239 evalue:2.6e-106 qcov:95.80 identity:83.40;
kegg_pathway_id 00910; 00920;
kegg_pathway_name Nitrogen metabolism; Sulfur metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF13442; PF00034;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c;
pfam_id Cytochrome_CBB3; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:3.8e-12 score:45.6 best_domain_score:22.1 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:5.4e-13 score:49.1 best_domain_score:30.9 name:Cytochrom_C;
sp YES;
70539 70610 signal_peptide
ID metaerg.pl|12282
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
72353 71271 CDS
ID metaerg.pl|12283
allgo_ids GO:0009055; GO:0020037;
allko_ids K00428;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479334.1 1 359 evalue:1.8e-170 qcov:99.70 identity:82.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF13442; PF00034;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c;
pfam_id Cytochrome_CBB3; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:4.1e-12 score:45.5 best_domain_score:26.1 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:1.9e-09 score:37.8 best_domain_score:20.8 name:Cytochrom_C;
sp YES;
tm_num 1;
71271 71339 signal_peptide
ID metaerg.pl|12284
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
72353 71271 transmembrane_helix
ID metaerg.pl|12285
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
topology i71289-71357o;
73626 72337 CDS
ID metaerg.pl|12286
allec_ids 1.8.3.1; 1.8.2.1;
allgo_ids GO:0016491; GO:0030151; GO:0055114; GO:0005758; GO:0005739; GO:0020037; GO:0043546; GO:0008482; GO:0042128; GO:0006790;
allko_ids K00387; K02016; K05301; K10534; K00360;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795605.1 1 429 evalue:2.3e-249 qcov:100.00 identity:96.50;
kegg_pathway_id 00910; 00920; 02010;
kegg_pathway_name Nitrogen metabolism; Sulfur metabolism; ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metabolic_acc TIGR04555;
metabolic_process compound:Sulfur;process:thiosulfate oxidation;gene:soxC;;
metabolic_target db:metabolic.hmm|TIGR04555 evalue:4.2e-182 score:604.8 best_domain_score:604.6 name:TIGR04555;
metacyc_pathway_id PWY-5294; PWY-5326; PWY-5335; PWY-5276; PWY-5328;
metacyc_pathway_name superpathway of sulfide oxidation (Acidithiobacillus ferrooxidans);; sulfite oxidation IV;; superpathway of sulfide oxidation (Starkeya novella);; sulfite oxidation I;; superpathway of L-methionine salvage and degradation;;
metacyc_pathway_type Sulfide-Oxidation; Super-Pathways;; Sulfite-Oxidation;; Sulfide-Oxidation; Super-Pathways;; CHEMOAUTOTROPHIC-ENERGY-METABOLISM; Sulfite-Oxidation;; METHIONINE-DEG; Super-Pathways;;
pfam_acc PF03404; PF00174;
pfam_desc Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain;
pfam_id Mo-co_dimer; Oxidored_molyb;
pfam_target db:Pfam-A.hmm|PF03404.16 evalue:2.9e-20 score:71.9 best_domain_score:69.5 name:Mo-co_dimer; db:Pfam-A.hmm|PF00174.19 evalue:9.1e-49 score:164.6 best_domain_score:163.7 name:Oxidored_molyb;
sp YES;
sprot_desc Probable sulfite oxidase, mitochondrial;
sprot_id sp|Q9VWP4|SUOX_DROME;
sprot_target db:uniprot_sprot|sp|Q9VWP4|SUOX_DROME 105 408 evalue:3.6e-28 qcov:70.90 identity:29.80;
tigrfam_acc TIGR01409; TIGR04555;
tigrfam_desc Tat (twin-arginine translocation) pathway signal sequence; sulfite dehydrogenase;
tigrfam_mainrole Protein fate;
tigrfam_name TAT_signal_seq; sulfite_DH_soxC;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01409 evalue:6.7e-05 score:22.2 best_domain_score:21.3 name:TIGR01409; db:TIGRFAMs.hmm|TIGR04555 evalue:4.2e-182 score:604.8 best_domain_score:604.6 name:TIGR04555;
72337 72456 signal_peptide
ID metaerg.pl|12287
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
75352 73655 CDS
ID metaerg.pl|12288
allgo_ids GO:0009166; GO:0016787;
allko_ids K08077; K01119; K11751; K01081; K08693; K06931;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795604.1 1 565 evalue:0.0e+00 qcov:100.00 identity:94.30;
kegg_pathway_id 00240; 00230; 00760;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Nicotinate and nicotinamide metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metabolic_acc TIGR04486;
metabolic_process compound:Sulfur;process:thiosulfate oxidation;gene:soxB;;
metabolic_target db:metabolic.hmm|TIGR04486 evalue:2.4e-250 score:830.7 best_domain_score:830.6 name:TIGR04486;
pfam_acc PF02872; PF00149;
pfam_desc 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase;
pfam_id 5_nucleotid_C; Metallophos;
pfam_target db:Pfam-A.hmm|PF02872.18 evalue:8.3e-16 score:57.8 best_domain_score:52.7 name:5_nucleotid_C; db:Pfam-A.hmm|PF00149.28 evalue:2.5e-07 score:30.6 best_domain_score:29.5 name:Metallophos;
sp YES;
tigrfam_acc TIGR04486;
tigrfam_desc thiosulfohydrolase SoxB;
tigrfam_name thiosulf_SoxB;
tigrfam_target db:TIGRFAMs.hmm|TIGR04486 evalue:2.4e-250 score:830.7 best_domain_score:830.6 name:TIGR04486;
73655 73747 signal_peptide
ID metaerg.pl|12289
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
76358 75501 CDS
ID metaerg.pl|12290
allec_ids 2.8.5.2;
allgo_ids GO:0070069; GO:0042597; GO:0009055; GO:0020037; GO:0005506; GO:0046872; GO:0016491; GO:0016669; GO:0046982; GO:0016783; GO:0008270; GO:0018192; GO:0055114; GO:0019417;
allko_ids K17222;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479336.1 1 285 evalue:9.0e-154 qcov:100.00 identity:89.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF09086;
pfam_desc Domain of unknown function (DUF1924);
pfam_id DUF1924;
pfam_target db:Pfam-A.hmm|PF09086.11 evalue:5.9e-05 score:22.6 best_domain_score:10.6 name:DUF1924;
sp YES;
sprot_desc L-cysteine S-thiosulfotransferase subunit SoxA;
sprot_id sp|O33434|SOXA_PARPN;
sprot_target db:uniprot_sprot|sp|O33434|SOXA_PARPN 5 284 evalue:7.3e-94 qcov:98.20 identity:59.50;
tigrfam_acc TIGR04484;
tigrfam_desc sulfur oxidation c-type cytochrome SoxA;
tigrfam_name thiosulf_SoxA;
tigrfam_target db:TIGRFAMs.hmm|TIGR04484 evalue:8.2e-65 score:217.2 best_domain_score:217.0 name:TIGR04484;
75501 75572 signal_peptide
ID metaerg.pl|12291
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
76720 76394 CDS
ID metaerg.pl|12292
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795602.1 1 108 evalue:3.3e-48 qcov:100.00 identity:87.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF08770;
pfam_desc Sulphur oxidation protein SoxZ;
pfam_id SoxZ;
pfam_target db:Pfam-A.hmm|PF08770.11 evalue:5.3e-31 score:105.5 best_domain_score:105.3 name:SoxZ;
tigrfam_acc TIGR04490;
tigrfam_desc thiosulfate oxidation carrier complex protein SoxZ;
tigrfam_name SoxZ_true;
tigrfam_target db:TIGRFAMs.hmm|TIGR04490 evalue:7.1e-32 score:108.4 best_domain_score:108.2 name:TIGR04490;
77185 76769 CDS
ID metaerg.pl|12293
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468300.1 1 138 evalue:9.7e-53 qcov:100.00 identity:81.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
metabolic_acc TIGR04488;
metabolic_process compound:Sulfur;process:thiosulfate oxidation;gene:soxY;;
metabolic_target db:metabolic.hmm|TIGR04488 evalue:5.7e-41 score:139.6 best_domain_score:139.3 name:TIGR04488;
pfam_acc PF13501;
pfam_desc Sulfur oxidation protein SoxY;
pfam_id SoxY;
pfam_target db:Pfam-A.hmm|PF13501.6 evalue:6.2e-30 score:102.9 best_domain_score:102.6 name:SoxY;
sp YES;
tigrfam_acc TIGR04488;
tigrfam_desc thiosulfate oxidation carrier protein SoxY;
tigrfam_name SoxY_true_GGCGG;
tigrfam_target db:TIGRFAMs.hmm|TIGR04488 evalue:5.7e-41 score:139.6 best_domain_score:139.3 name:TIGR04488;
76769 76852 signal_peptide
ID metaerg.pl|12294
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
77729 77235 CDS
ID metaerg.pl|12295
allgo_ids GO:0009055; GO:0020037;
allko_ids K05301; K02305;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468299.1 1 164 evalue:1.1e-74 qcov:100.00 identity:81.70;
kegg_pathway_id 00910; 00920;
kegg_pathway_name Nitrogen metabolism; Sulfur metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
pfam_acc PF13442; PF00034;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c;
pfam_id Cytochrome_CBB3; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:4.7e-07 score:29.3 best_domain_score:21.9 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:5.4e-09 score:36.3 best_domain_score:35.2 name:Cytochrom_C;
sp YES;
tigrfam_acc TIGR04485;
tigrfam_desc sulfur oxidation c-type cytochrome SoxX;
tigrfam_name thiosulf_SoxX;
tigrfam_target db:TIGRFAMs.hmm|TIGR04485 evalue:3.4e-26 score:90.9 best_domain_score:90.5 name:TIGR04485;
77235 77303 signal_peptide
ID metaerg.pl|12296
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 208.869; 0.0132317; 0.357205; 209.736; 0.496898;
>Feature NODE_95_length_77568_cov_49.018
1512 85 CDS
ID metaerg.pl|12297
allgo_ids GO:0003677; GO:0004519; GO:0015074; GO:0006310; GO:0006281; GO:0043158; GO:0009399;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092841.1 1 475 evalue:1.7e-269 qcov:100.00 identity:97.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
sprot_desc Excisase A;
sprot_id sp|P08862|XISA_NOSS1;
sprot_target db:uniprot_sprot|sp|P08862|XISA_NOSS1 5 438 evalue:9.6e-115 qcov:91.40 identity:47.90;
1668 2081 CDS
ID metaerg.pl|12298
allec_ids 1.18.6.1;
allgo_ids GO:0005524; GO:0016491; GO:0055114; GO:0016612; GO:0051539; GO:0018697; GO:0046872; GO:0016163; GO:0009399;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092731.1 1 136 evalue:3.2e-64 qcov:99.30 identity:94.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metacyc_pathway_id N2FIX-PWY;
metacyc_pathway_name nitrogen fixation I (ferredoxin);;
metacyc_pathway_type Nitrogen-Fixation;;
pfam_acc PF00142;
pfam_desc 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family;
pfam_id Fer4_NifH;
pfam_target db:Pfam-A.hmm|PF00142.18 evalue:1.3e-46 score:158.5 best_domain_score:158.3 name:Fer4_NifH;
sprot_desc Nitrogenase iron protein;
sprot_id sp|P26250|NIFH_NOSCO;
sprot_target db:uniprot_sprot|sp|P26250|NIFH_NOSCO 1 136 evalue:1.1e-63 qcov:99.30 identity:91.20;
2204 3646 CDS
ID metaerg.pl|12299
allec_ids 1.18.6.1;
allgo_ids GO:0016491; GO:0055114; GO:0016612; GO:0005524; GO:0018697; GO:0051536; GO:0046872; GO:0016163; GO:0009399;
allko_ids K02591; K02586;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194555.1 1 480 evalue:2.0e-278 qcov:100.00 identity:97.50;
kegg_pathway_id 00625; 00910;
kegg_pathway_name Tetrachloroethene degradation; Nitrogen metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metabolic_acc TIGR01282;
metabolic_process compound:Nitrogen;process:N2 fixation;gene:Mo-Fe type Alpha;;
metacyc_pathway_id N2FIX-PWY;
metacyc_pathway_name nitrogen fixation I (ferredoxin);;
metacyc_pathway_type Nitrogen-Fixation;;
pfam_acc PF00148;
pfam_desc Nitrogenase component 1 type Oxidoreductase;
pfam_id Oxidored_nitro;
pfam_target db:Pfam-A.hmm|PF00148.19 evalue:9e-98 score:326.8 best_domain_score:326.4 name:Oxidored_nitro;
sprot_desc Nitrogenase molybdenum-iron protein alpha chain;
sprot_id sp|Q00239|NIFD_LEPBY;
sprot_target db:uniprot_sprot|sp|Q00239|NIFD_LEPBY 1 458 evalue:3.4e-216 qcov:95.40 identity:79.50;
tigrfam_acc TIGR01282; TIGR01862;
tigrfam_desc nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain;
tigrfam_mainrole Central intermediary metabolism; Central intermediary metabolism;
tigrfam_name nifD; N2-ase-Ialpha;
tigrfam_sub1role Nitrogen fixation; Nitrogen fixation;
tigrfam_target db:TIGRFAMs.hmm|TIGR01282 evalue:3.7e-245 score:813.0 best_domain_score:812.8 name:TIGR01282; db:TIGRFAMs.hmm|TIGR01862 evalue:1.1e-167 score:557.3 best_domain_score:556.8 name:TIGR01862;
4466 3888 CDS
ID metaerg.pl|12300
allgo_ids GO:0009399;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092840.1 1 192 evalue:1.7e-108 qcov:100.00 identity:95.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
sprot_desc hypothetical protein;
sprot_id sp|P29979|Y1449_NOSS1;
sprot_target db:uniprot_sprot|sp|P29979|Y1449_NOSS1 1 192 evalue:7.6e-95 qcov:100.00 identity:80.70;
5611 4541 CDS
ID metaerg.pl|12301
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092839.1 1 353 evalue:8.6e-178 qcov:99.20 identity:87.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF13847; PF10017;
pfam_desc Methyltransferase domain; Histidine-specific methyltransferase, SAM-dependent;
pfam_id Methyltransf_31; Methyltransf_33;
pfam_target db:Pfam-A.hmm|PF13847.6 evalue:6e-07 score:28.6 best_domain_score:25.4 name:Methyltransf_31; db:Pfam-A.hmm|PF10017.9 evalue:8.3e-24 score:83.5 best_domain_score:79.4 name:Methyltransf_33;
6888 6148 CDS
ID metaerg.pl|12302
allgo_ids GO:0008168;
allko_ids K00599;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aphanizomenon_A;s__Aphanizomenon_A sp001277295;
genomedb_acc GCF_001277295.1;
genomedb_target db:genomedb|GCF_001277295.1|WP_053541229.1 15 246 evalue:2.5e-99 qcov:94.30 identity:73.70;
kegg_pathway_id 00626; 00450; 00350; 00150; 00380; 00340;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Tyrosine metabolism; Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF08241; PF08242; PF13489; PF13649; PF13847; PF02390; PF07021; PF05175; PF01209;
pfam_desc Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Putative methyltransferase ; Methionine biosynthesis protein MetW; Methyltransferase small domain; ubiE/COQ5 methyltransferase family;
pfam_id Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; Methyltransf_4; MetW; MTS; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:9.2e-13 score:47.9 best_domain_score:47.3 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:1e-10 score:41.5 best_domain_score:40.9 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:2.4e-10 score:39.7 best_domain_score:39.3 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.4e-10 score:41.0 best_domain_score:40.3 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:2.3e-10 score:39.7 best_domain_score:38.7 name:Methyltransf_31; db:Pfam-A.hmm|PF02390.17 evalue:3.2e-05 score:22.7 best_domain_score:20.4 name:Methyltransf_4; db:Pfam-A.hmm|PF07021.12 evalue:3.5e-13 score:48.8 best_domain_score:48.4 name:MetW; db:Pfam-A.hmm|PF05175.14 evalue:7.3e-06 score:24.9 best_domain_score:24.4 name:MTS; db:Pfam-A.hmm|PF01209.18 evalue:3.4e-06 score:25.8 best_domain_score:25.3 name:Ubie_methyltran;
8327 7026 CDS
ID metaerg.pl|12303
allgo_ids GO:0003677; GO:0004519; GO:0015074; GO:0006310; GO:0006281; GO:0043158; GO:0009399;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092835.1 1 432 evalue:6.6e-241 qcov:99.80 identity:95.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
sprot_desc Excisase A;
sprot_id sp|P08862|XISA_NOSS1;
sprot_target db:uniprot_sprot|sp|P08862|XISA_NOSS1 1 402 evalue:9.1e-205 qcov:92.80 identity:84.30;
8985 10520 CDS
ID metaerg.pl|12304
allec_ids 1.18.6.1;
allgo_ids GO:0016491; GO:0055114; GO:0016612; GO:0005524; GO:0018697; GO:0051536; GO:0046872; GO:0016163; GO:0009399;
allko_ids K02591;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194550.1 1 511 evalue:1.8e-301 qcov:100.00 identity:97.80;
kegg_pathway_id 00910; 00625;
kegg_pathway_name Nitrogen metabolism; Tetrachloroethene degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metabolic_acc TIGR01286;
metabolic_process compound:Nitrogen;process:N2 fixation;gene:Mo-Fe type beta;;
metacyc_pathway_id N2FIX-PWY;
metacyc_pathway_name nitrogen fixation I (ferredoxin);;
metacyc_pathway_type Nitrogen-Fixation;;
pfam_acc PF11844; PF00148;
pfam_desc Domain of unknown function (DUF3364); Nitrogenase component 1 type Oxidoreductase;
pfam_id DUF3364; Oxidored_nitro;
pfam_target db:Pfam-A.hmm|PF11844.8 evalue:3.2e-27 score:93.8 best_domain_score:93.8 name:DUF3364; db:Pfam-A.hmm|PF00148.19 evalue:2.8e-121 score:404.2 best_domain_score:404.0 name:Oxidored_nitro;
sprot_desc Nitrogenase molybdenum-iron protein beta chain;
sprot_id sp|P00468|NIFK_NOSS1;
sprot_target db:uniprot_sprot|sp|P00468|NIFK_NOSS1 1 511 evalue:4.8e-245 qcov:100.00 identity:76.20;
tigrfam_acc TIGR01286;
tigrfam_desc nitrogenase molybdenum-iron protein beta chain;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name nifK;
tigrfam_sub1role Nitrogen fixation;
tigrfam_target db:TIGRFAMs.hmm|TIGR01286 evalue:3.1e-271 score:899.4 best_domain_score:899.2 name:TIGR01286;
10736 11065 CDS
ID metaerg.pl|12305
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092833.1 1 109 evalue:3.8e-60 qcov:100.00 identity:97.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF06967;
pfam_desc Mo-dependent nitrogenase C-terminus;
pfam_id Mo-nitro_C;
pfam_target db:Pfam-A.hmm|PF06967.11 evalue:1.9e-41 score:139.1 best_domain_score:138.9 name:Mo-nitro_C;
11270 12649 CDS
ID metaerg.pl|12306
allgo_ids GO:0016491; GO:0055114; GO:0016163; GO:0009399; GO:0065003;
allko_ids K02586; K02591; K02587;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092832.1 1 459 evalue:1.2e-261 qcov:100.00 identity:99.10;
kegg_pathway_id 00910; 00625;
kegg_pathway_name Nitrogen metabolism; Tetrachloroethene degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00148;
pfam_desc Nitrogenase component 1 type Oxidoreductase;
pfam_id Oxidored_nitro;
pfam_target db:Pfam-A.hmm|PF00148.19 evalue:6.6e-115 score:383.2 best_domain_score:383.1 name:Oxidored_nitro;
sprot_desc Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE;
sprot_id sp|Q44144|NIFE_NOSS1;
sprot_target db:uniprot_sprot|sp|Q44144|NIFE_NOSS1 1 459 evalue:1.5e-242 qcov:100.00 identity:90.00;
tigrfam_acc TIGR01283;
tigrfam_desc nitrogenase MoFe cofactor biosynthesis protein NifE;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name nifE;
tigrfam_sub1role Nitrogen fixation;
tigrfam_target db:TIGRFAMs.hmm|TIGR01283 evalue:2.1e-209 score:695.0 best_domain_score:694.8 name:TIGR01283;
12755 14104 CDS
ID metaerg.pl|12307
allgo_ids GO:0016491; GO:0055114; GO:0016163; GO:0009399; GO:0065003;
allko_ids K02591; K02592;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094041.1 8 449 evalue:5.6e-243 qcov:98.40 identity:98.40;
kegg_pathway_id 00625; 00910;
kegg_pathway_name Tetrachloroethene degradation; Nitrogen metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00148;
pfam_desc Nitrogenase component 1 type Oxidoreductase;
pfam_id Oxidored_nitro;
pfam_target db:Pfam-A.hmm|PF00148.19 evalue:4.7e-113 score:377.2 best_domain_score:377.0 name:Oxidored_nitro;
sprot_desc Nitrogenase iron-molybdenum cofactor biosynthesis protein NifN;
sprot_id sp|Q44145|NIFN_NOSS1;
sprot_target db:uniprot_sprot|sp|Q44145|NIFN_NOSS1 8 444 evalue:6.6e-214 qcov:97.30 identity:85.60;
tigrfam_acc TIGR01285;
tigrfam_desc nitrogenase molybdenum-iron cofactor biosynthesis protein NifN;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name nifN;
tigrfam_sub1role Nitrogen fixation;
tigrfam_target db:TIGRFAMs.hmm|TIGR01285 evalue:1.6e-182 score:606.5 best_domain_score:606.1 name:TIGR01285;
14286 14675 CDS
ID metaerg.pl|12308
allgo_ids GO:0051540; GO:0051188; GO:0009399;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194546.1 1 129 evalue:1.2e-65 qcov:100.00 identity:98.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF02579;
pfam_desc Dinitrogenase iron-molybdenum cofactor;
pfam_id Nitro_FeMo-Co;
pfam_target db:Pfam-A.hmm|PF02579.17 evalue:1.2e-18 score:66.5 best_domain_score:66.2 name:Nitro_FeMo-Co;
sprot_desc hypothetical protein;
sprot_id sp|O87628|NIFX_HERSE;
sprot_target db:uniprot_sprot|sp|O87628|NIFX_HERSE 1 122 evalue:1.4e-31 qcov:94.60 identity:50.80;
tigrfam_acc TIGR02663;
tigrfam_desc nitrogen fixation protein NifX;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name nifX;
tigrfam_sub1role Nitrogen fixation;
tigrfam_target db:TIGRFAMs.hmm|TIGR02663 evalue:2.4e-50 score:169.1 best_domain_score:168.9 name:TIGR02663;
14696 15172 CDS
ID metaerg.pl|12309
allgo_ids GO:0009399;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092830.1 1 158 evalue:6.5e-77 qcov:100.00 identity:93.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF03270;
pfam_desc Protein of unknown function, DUF269;
pfam_id DUF269;
pfam_target db:Pfam-A.hmm|PF03270.13 evalue:1.4e-49 score:166.4 best_domain_score:166.2 name:DUF269;
sprot_desc hypothetical protein;
sprot_id sp|P46042|YNI3_FRAAL;
sprot_target db:uniprot_sprot|sp|P46042|YNI3_FRAAL 20 155 evalue:2.8e-26 qcov:86.10 identity:42.60;
tigrfam_acc TIGR02935;
tigrfam_desc probable nitrogen fixation protein;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name TIGR02935;
tigrfam_sub1role Nitrogen fixation;
tigrfam_target db:TIGRFAMs.hmm|TIGR02935 evalue:8.9e-46 score:154.7 best_domain_score:154.5 name:TIGR02935;
15288 15506 CDS
ID metaerg.pl|12310
allgo_ids GO:0009399;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092829.1 1 72 evalue:1.0e-29 qcov:100.00 identity:98.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF05082;
pfam_desc Rop-like;
pfam_id Rop-like;
pfam_target db:Pfam-A.hmm|PF05082.13 evalue:1e-29 score:101.4 best_domain_score:101.2 name:Rop-like;
sprot_desc hypothetical protein;
sprot_id sp|Q44148|Y1434_NOSS1;
sprot_target db:uniprot_sprot|sp|Q44148|Y1434_NOSS1 3 72 evalue:1.4e-25 qcov:97.20 identity:84.30;
15503 15820 CDS
ID metaerg.pl|12311
allgo_ids GO:0009399;
allko_ids K02595;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092828.1 1 105 evalue:6.7e-46 qcov:100.00 identity:90.50;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF03206;
pfam_desc Nitrogen fixation protein NifW;
pfam_id NifW;
pfam_target db:Pfam-A.hmm|PF03206.14 evalue:6.3e-33 score:112.5 best_domain_score:112.4 name:NifW;
sprot_desc Nitrogenase-stabilizing/protective protein NifW;
sprot_id sp|B2J5Z9|NIFW_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J5Z9|NIFW_NOSP7 1 105 evalue:1.2e-36 qcov:100.00 identity:72.40;
15831 16631 CDS
ID metaerg.pl|12312
allgo_ids GO:0008641; GO:0043158; GO:0009399;
allko_ids K03148;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092827.1 1 265 evalue:5.9e-147 qcov:99.60 identity:98.90;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00899;
pfam_desc ThiF family;
pfam_id ThiF;
pfam_target db:Pfam-A.hmm|PF00899.21 evalue:8.6e-49 score:165.3 best_domain_score:165.0 name:ThiF;
sprot_desc hypothetical protein;
sprot_id sp|P46049|HESA1_ANAVT;
sprot_target db:uniprot_sprot|sp|P46049|HESA1_ANAVT 1 266 evalue:9.1e-139 qcov:100.00 identity:90.20;
tm_num 1;
15831 16631 transmembrane_helix
ID metaerg.pl|12313
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
topology i15930-15998o;
16717 17088 CDS
ID metaerg.pl|12314
allgo_ids GO:0051536; GO:0005198; GO:0043158; GO:0009399; GO:0097428;
allko_ids K13628;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092826.1 1 123 evalue:1.2e-62 qcov:100.00 identity:98.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF01521;
pfam_desc Iron-sulphur cluster biosynthesis;
pfam_id Fe-S_biosyn;
pfam_target db:Pfam-A.hmm|PF01521.20 evalue:3e-24 score:84.6 best_domain_score:84.4 name:Fe-S_biosyn;
sprot_desc hypothetical protein;
sprot_id sp|P46051|HESB1_ANAVT;
sprot_target db:uniprot_sprot|sp|P46051|HESB1_ANAVT 1 123 evalue:4.3e-51 qcov:100.00 identity:76.40;
tigrfam_acc TIGR00049;
tigrfam_desc iron-sulfur cluster assembly accessory protein;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name TIGR00049;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00049 evalue:2.6e-36 score:123.2 best_domain_score:123.0 name:TIGR00049;
17364 17663 CDS
ID metaerg.pl|12315
allgo_ids GO:0009055; GO:0051536; GO:0051537; GO:0046872; GO:0043158; GO:0009399;
allko_ids K00123; K00529; K00240; K00366; K00235; K00245; K08264; K00436;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194540.1 1 99 evalue:3.3e-47 qcov:100.00 identity:93.90;
kegg_pathway_id 00910; 02020; 00790; 00650; 00680; 05012; 00630; 00071; 00360; 00190; 00720; 00632; 00020;
kegg_pathway_name Nitrogen metabolism; Two-component system - General; Folate biosynthesis; Butanoate metabolism; Methane metabolism; Parkinson's disease; Glyoxylate and dicarboxylate metabolism; Fatty acid metabolism; Phenylalanine metabolism; Oxidative phosphorylation; Reductive carboxylate cycle (CO2 fixation); Benzoate degradation via CoA ligation; Citrate cycle (TCA cycle);
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00111;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain;
pfam_id Fer2;
pfam_target db:Pfam-A.hmm|PF00111.27 evalue:1.9e-20 score:71.8 best_domain_score:71.6 name:Fer2;
sprot_desc Ferredoxin, heterocyst;
sprot_id sp|P11053|FERH_NOSS1;
sprot_target db:uniprot_sprot|sp|P11053|FERH_NOSS1 1 98 evalue:3.1e-47 qcov:99.00 identity:88.80;
tigrfam_acc TIGR02008;
tigrfam_desc ferredoxin [2Fe-2S];
tigrfam_name fdx_plant;
tigrfam_target db:TIGRFAMs.hmm|TIGR02008 evalue:1.9e-42 score:142.1 best_domain_score:142.0 name:TIGR02008;
18932 17751 CDS
ID metaerg.pl|12316
allgo_ids GO:0004970; GO:0016020; GO:0016021; GO:0005886;
allko_ids K02030; K02029;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092824.1 1 393 evalue:6.8e-192 qcov:100.00 identity:89.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF07885; PF00060; PF10613; PF00497;
pfam_desc Ion channel; Ligand-gated ion channel; Ligated ion channel L-glutamate- and glycine-binding site; Bacterial extracellular solute-binding proteins, family 3;
pfam_id Ion_trans_2; Lig_chan; Lig_chan-Glu_bd; SBP_bac_3;
pfam_target db:Pfam-A.hmm|PF07885.16 evalue:3e-10 score:39.2 best_domain_score:37.9 name:Ion_trans_2; db:Pfam-A.hmm|PF00060.26 evalue:2.1e-11 score:43.1 best_domain_score:42.5 name:Lig_chan; db:Pfam-A.hmm|PF10613.9 evalue:1.4e-08 score:34.2 best_domain_score:29.1 name:Lig_chan-Glu_bd; db:Pfam-A.hmm|PF00497.20 evalue:5.9e-56 score:188.6 best_domain_score:188.4 name:SBP_bac_3;
sprot_desc Glutamate receptor 3.1;
sprot_id sp|Q7XP59|GLR31_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q7XP59|GLR31_ORYSJ 50 391 evalue:3.6e-22 qcov:87.00 identity:28.70;
tm_num 4;
18932 17751 transmembrane_helix
ID metaerg.pl|12317
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
topology i17829-17897o18231-18299i18336-18404o18447-18515i;
19943 19095 CDS
ID metaerg.pl|12318
allgo_ids GO:0008168;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092823.1 1 282 evalue:8.4e-152 qcov:100.00 identity:94.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF08241; PF13489;
pfam_desc Methyltransferase domain; Methyltransferase domain;
pfam_id Methyltransf_11; Methyltransf_23;
pfam_target db:Pfam-A.hmm|PF08241.12 evalue:1.3e-06 score:28.2 best_domain_score:27.3 name:Methyltransf_11; db:Pfam-A.hmm|PF13489.6 evalue:4e-08 score:32.5 best_domain_score:30.7 name:Methyltransf_23;
20545 20117 CDS
ID metaerg.pl|12319
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092822.1 1 142 evalue:6.7e-73 qcov:100.00 identity:90.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF07845;
pfam_desc Protein of unknown function (DUF1636);
pfam_id DUF1636;
pfam_target db:Pfam-A.hmm|PF07845.11 evalue:2e-39 score:133.8 best_domain_score:133.6 name:DUF1636;
21573 22037 CDS
ID metaerg.pl|12320
allgo_ids GO:0005515;
allko_ids K08848; K00599;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092821.1 1 154 evalue:8.2e-77 qcov:100.00 identity:93.50;
kegg_pathway_id 00450; 00626; 00350; 00150; 00380; 00340;
kegg_pathway_name Selenoamino acid metabolism; Naphthalene and anthracene degradation; Tyrosine metabolism; Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00023; PF12796; PF13606; PF13637; PF13857;
pfam_desc Ankyrin repeat; Ankyrin repeats (3 copies); Ankyrin repeat; Ankyrin repeats (many copies); Ankyrin repeats (many copies);
pfam_id Ank; Ank_2; Ank_3; Ank_4; Ank_5;
pfam_target db:Pfam-A.hmm|PF00023.30 evalue:3.2e-15 score:55.0 best_domain_score:21.6 name:Ank; db:Pfam-A.hmm|PF12796.7 evalue:3.3e-25 score:87.7 best_domain_score:42.8 name:Ank_2; db:Pfam-A.hmm|PF13606.6 evalue:8.8e-15 score:52.6 best_domain_score:19.3 name:Ank_3; db:Pfam-A.hmm|PF13637.6 evalue:2.9e-20 score:71.6 best_domain_score:34.7 name:Ank_4; db:Pfam-A.hmm|PF13857.6 evalue:1.1e-13 score:50.3 best_domain_score:31.9 name:Ank_5;
22024 23334 CDS
ID metaerg.pl|12321
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092820.1 1 436 evalue:2.7e-242 qcov:100.00 identity:94.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00881;
pfam_desc Nitroreductase family;
pfam_id Nitroreductase;
pfam_target db:Pfam-A.hmm|PF00881.24 evalue:5.8e-10 score:38.7 best_domain_score:31.9 name:Nitroreductase;
tigrfam_acc TIGR03605;
tigrfam_desc SagB-type dehydrogenase domain;
tigrfam_name antibiot_sagB;
tigrfam_target db:TIGRFAMs.hmm|TIGR03605 evalue:1.2e-27 score:95.6 best_domain_score:70.7 name:TIGR03605;
23353 23727 CDS
ID metaerg.pl|12322
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092819.1 1 124 evalue:7.1e-63 qcov:100.00 identity:95.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
24262 23783 CDS
ID metaerg.pl|12323
allgo_ids GO:0008047; GO:0008233;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092818.1 7 159 evalue:1.2e-75 qcov:96.20 identity:91.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF01750;
pfam_desc Hydrogenase maturation protease;
pfam_id HycI;
pfam_target db:Pfam-A.hmm|PF01750.18 evalue:2.4e-14 score:52.5 best_domain_score:52.3 name:HycI;
sp YES;
tigrfam_acc TIGR00072;
tigrfam_desc hydrogenase maturation protease;
tigrfam_name hydrog_prot;
tigrfam_target db:TIGRFAMs.hmm|TIGR00072 evalue:9e-37 score:125.4 best_domain_score:125.3 name:TIGR00072;
23783 23818 lipoprotein_signal_peptide
ID metaerg.pl|12324
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
24759 24337 CDS
ID metaerg.pl|12325
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092817.1 1 139 evalue:8.6e-73 qcov:99.30 identity:99.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
24956 25624 CDS
ID metaerg.pl|12326
allgo_ids GO:0003676;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092816.1 1 222 evalue:1.0e-112 qcov:100.00 identity:94.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00313; PF06961;
pfam_desc 'Cold-shock' DNA-binding domain; Protein of unknown function (DUF1294);
pfam_id CSD; DUF1294;
pfam_target db:Pfam-A.hmm|PF00313.22 evalue:3.5e-09 score:35.6 best_domain_score:35.1 name:CSD; db:Pfam-A.hmm|PF06961.13 evalue:6.2e-23 score:80.0 best_domain_score:79.1 name:DUF1294;
tm_num 3;
24956 25624 transmembrane_helix
ID metaerg.pl|12327
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
topology i25253-25321o25331-25390i25538-25591o;
26880 25792 CDS
ID metaerg.pl|12328
allec_ids 1.12.99.6;
allgo_ids GO:0016151; GO:0042597; GO:0008901; GO:0033748;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092815.1 1 362 evalue:2.1e-216 qcov:100.00 identity:97.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metacyc_pathway_id P283-PWY;
metacyc_pathway_name hydrogen oxidation I (aerobic);;
metacyc_pathway_type Hydrogen-Oxidation;;
pfam_acc PF00374;
pfam_desc Nickel-dependent hydrogenase;
pfam_id NiFeSe_Hases;
pfam_target db:Pfam-A.hmm|PF00374.19 evalue:1.1e-50 score:172.3 best_domain_score:171.8 name:NiFeSe_Hases;
sprot_desc Periplasmic [NiFeSe] hydrogenase large subunit;
sprot_id sp|P13065|PHSL_DESBA;
sprot_target db:uniprot_sprot|sp|P13065|PHSL_DESBA 79 355 evalue:8.0e-29 qcov:76.50 identity:32.40;
27009 28502 CDS
ID metaerg.pl|12329
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0006281; GO:0043158;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194530.1 1 487 evalue:1.2e-273 qcov:98.00 identity:96.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00589;
pfam_desc Phage integrase family;
pfam_id Phage_integrase;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:3.7e-07 score:29.3 best_domain_score:27.6 name:Phage_integrase;
sprot_desc Excisase C;
sprot_id sp|Q44217|XISC_NOSS1;
sprot_target db:uniprot_sprot|sp|Q44217|XISC_NOSS1 1 497 evalue:9.0e-265 qcov:100.00 identity:91.30;
28736 29269 CDS
ID metaerg.pl|12330
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia;s__Paraburkholderia sp001634365;
genomedb_acc GCF_001634365.1;
genomedb_target db:genomedb|GCF_001634365.1|WP_063496035.1 4 161 evalue:7.6e-42 qcov:89.30 identity:49.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
29673 30293 CDS
ID metaerg.pl|12331
allko_ids K00380;
kegg_pathway_id 00920;
kegg_pathway_name Sulfur metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
tm_num 3;
29673 30293 transmembrane_helix
ID metaerg.pl|12332
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
topology i29778-29837o29850-29918i29997-30065o;
30523 30876 CDS
ID metaerg.pl|12333
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Trichormus;s__Trichormus sp000009705;
genomedb_acc GCF_000009705.1;
genomedb_target db:genomedb|GCF_000009705.1|WP_010994856.1 24 117 evalue:2.0e-46 qcov:80.30 identity:98.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
30873 31220 CDS
ID metaerg.pl|12334
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Cylindrospermum;s__Cylindrospermum stagnale;
genomedb_acc GCF_000317535.1;
genomedb_target db:genomedb|GCF_000317535.1|WP_015210707.1 1 115 evalue:4.6e-56 qcov:100.00 identity:97.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
31308 31535 CDS
ID metaerg.pl|12335
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Calothrix;s__Calothrix elsteri;
genomedb_acc GCF_002289455.1;
genomedb_target db:genomedb|GCF_002289455.1|WP_095724443.1 1 75 evalue:6.7e-32 qcov:100.00 identity:96.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
33291 31735 CDS
ID metaerg.pl|12336
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194524.1 1 518 evalue:2.4e-282 qcov:100.00 identity:94.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00004; PF14516;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA-like domain;
pfam_id AAA; AAA_35;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:5.9e-08 score:32.5 best_domain_score:31.2 name:AAA; db:Pfam-A.hmm|PF14516.6 evalue:3.8e-08 score:31.8 best_domain_score:29.2 name:AAA_35;
34035 33451 CDS
ID metaerg.pl|12337
allec_ids 1.12.99.6;
allgo_ids GO:0016151; GO:0042597; GO:0008901; GO:0033748;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194523.1 1 194 evalue:1.9e-107 qcov:100.00 identity:96.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metacyc_pathway_id P283-PWY;
metacyc_pathway_name hydrogen oxidation I (aerobic);;
metacyc_pathway_type Hydrogen-Oxidation;;
pfam_acc PF00374;
pfam_desc Nickel-dependent hydrogenase;
pfam_id NiFeSe_Hases;
pfam_target db:Pfam-A.hmm|PF00374.19 evalue:1.4e-18 score:66.4 best_domain_score:62.6 name:NiFeSe_Hases;
sprot_desc Periplasmic [NiFeSe] hydrogenase large subunit;
sprot_id sp|P13065|PHSL_DESBA;
sprot_target db:uniprot_sprot|sp|P13065|PHSL_DESBA 6 172 evalue:1.8e-19 qcov:86.10 identity:32.60;
35351 34389 CDS
ID metaerg.pl|12338
allec_ids 1.12.2.1;
allgo_ids GO:0051536; GO:0055114; GO:0009375; GO:0042597; GO:0051538; GO:0051539; GO:0047806; GO:0008901; GO:0046872;
allko_ids K06282;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092814.1 1 320 evalue:1.0e-190 qcov:100.00 identity:97.50;
kegg_pathway_id 00633;
kegg_pathway_name Trinitrotoluene degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF14720; PF01058;
pfam_desc NiFe/NiFeSe hydrogenase small subunit C-terminal; NADH ubiquinone oxidoreductase, 20 Kd subunit;
pfam_id NiFe_hyd_SSU_C; Oxidored_q6;
pfam_target db:Pfam-A.hmm|PF14720.6 evalue:8.9e-23 score:79.7 best_domain_score:78.8 name:NiFe_hyd_SSU_C; db:Pfam-A.hmm|PF01058.22 evalue:7.8e-34 score:115.6 best_domain_score:115.1 name:Oxidored_q6;
sprot_desc Periplasmic [NiFe] hydrogenase small subunit;
sprot_id sp|P12943|PHNS_DESGI;
sprot_target db:uniprot_sprot|sp|P12943|PHNS_DESGI 3 266 evalue:3.9e-35 qcov:82.50 identity:31.70;
35759 36763 CDS
ID metaerg.pl|12339
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092813.1 1 334 evalue:6.4e-175 qcov:100.00 identity:96.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
36792 37031 CDS
ID metaerg.pl|12340
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092812.1 1 79 evalue:3.0e-30 qcov:100.00 identity:91.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
tm_num 2;
36792 37031 transmembrane_helix
ID metaerg.pl|12341
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
topology i36846-36914o36942-37010i;
37040 37264 CDS
ID metaerg.pl|12342
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092811.1 1 74 evalue:2.5e-31 qcov:100.00 identity:94.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
tm_num 1;
37040 37264 transmembrane_helix
ID metaerg.pl|12343
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
topology o37184-37243i;
37487 38320 CDS
ID metaerg.pl|12344
allgo_ids GO:0005506; GO:0016226; GO:0051536;
allko_ids K00363; K05710;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092810.1 1 277 evalue:4.0e-146 qcov:100.00 identity:94.20;
kegg_pathway_id 00360; 00910;
kegg_pathway_name Phenylalanine metabolism; Nitrogen metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF01106; PF00355; PF13806;
pfam_desc NifU-like domain; Rieske [2Fe-2S] domain; Rieske-like [2Fe-2S] domain;
pfam_id NifU; Rieske; Rieske_2;
pfam_target db:Pfam-A.hmm|PF01106.17 evalue:4.3e-22 score:77.3 best_domain_score:75.7 name:NifU; db:Pfam-A.hmm|PF00355.26 evalue:2.1e-14 score:52.5 best_domain_score:51.7 name:Rieske; db:Pfam-A.hmm|PF13806.6 evalue:6e-09 score:35.0 best_domain_score:33.9 name:Rieske_2;
38398 39603 CDS
ID metaerg.pl|12345
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092809.1 1 401 evalue:1.8e-224 qcov:100.00 identity:90.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF01436;
pfam_desc NHL repeat;
pfam_id NHL;
pfam_target db:Pfam-A.hmm|PF01436.21 evalue:2e-21 score:74.1 best_domain_score:21.1 name:NHL;
39639 41981 CDS
ID metaerg.pl|12346
allec_ids 6.2.-.-;
allgo_ids GO:0003725; GO:0016743; GO:0016874; GO:0008270; GO:0046944;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194516.1 1 778 evalue:0.0e+00 qcov:99.70 identity:92.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00708; PF17788; PF00814; PF01300; PF07503;
pfam_desc Acylphosphatase; HypF Kae1-like domain; Glycoprotease family; Telomere recombination; HypF finger;
pfam_id Acylphosphatase; HypF_C; Peptidase_M22; Sua5_yciO_yrdC; zf-HYPF;
pfam_target db:Pfam-A.hmm|PF00708.18 evalue:1.2e-18 score:66.5 best_domain_score:65.2 name:Acylphosphatase; db:Pfam-A.hmm|PF17788.1 evalue:8.4e-36 score:122.0 best_domain_score:119.5 name:HypF_C; db:Pfam-A.hmm|PF00814.25 evalue:1.5e-07 score:30.7 best_domain_score:21.3 name:Peptidase_M22; db:Pfam-A.hmm|PF01300.18 evalue:2.4e-55 score:186.1 best_domain_score:185.1 name:Sua5_yciO_yrdC; db:Pfam-A.hmm|PF07503.12 evalue:1.3e-28 score:97.7 best_domain_score:55.5 name:zf-HYPF;
sprot_desc Carbamoyltransferase HypF;
sprot_id sp|Q02987|HYPF_RHOCA;
sprot_target db:uniprot_sprot|sp|Q02987|HYPF_RHOCA 4 776 evalue:1.0e-166 qcov:99.10 identity:44.00;
tigrfam_acc TIGR00143;
tigrfam_desc carbamoyltransferase HypF;
tigrfam_mainrole Protein fate;
tigrfam_name hypF;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00143 evalue:1.4e-255 score:849.2 best_domain_score:849.0 name:TIGR00143;
42042 42302 CDS
ID metaerg.pl|12347
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092807.1 1 86 evalue:3.4e-40 qcov:100.00 identity:96.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF01455;
pfam_desc HupF/HypC family;
pfam_id HupF_HypC;
pfam_target db:Pfam-A.hmm|PF01455.18 evalue:4.3e-28 score:96.5 best_domain_score:96.3 name:HupF_HypC;
sprot_desc Frd operon uncharacterized protein C;
sprot_id sp|P20927|YFRC_PROVU;
sprot_target db:uniprot_sprot|sp|P20927|YFRC_PROVU 1 85 evalue:1.4e-16 qcov:98.80 identity:49.40;
tigrfam_acc TIGR00074;
tigrfam_desc hydrogenase assembly chaperone HypC/HupF;
tigrfam_mainrole Protein fate;
tigrfam_name hypC_hupF;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00074 evalue:1.8e-23 score:81.3 best_domain_score:81.2 name:TIGR00074;
42514 43653 CDS
ID metaerg.pl|12348
allgo_ids GO:0046872; GO:0051539;
allko_ids K04654;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194514.1 1 379 evalue:1.8e-213 qcov:100.00 identity:97.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF01924;
pfam_desc Hydrogenase formation hypA family;
pfam_id HypD;
pfam_target db:Pfam-A.hmm|PF01924.16 evalue:2.2e-163 score:542.6 best_domain_score:542.4 name:HypD;
sprot_desc Hydrogenase maturation factor HypD2;
sprot_id sp|P31904|HYPD2_BRADU;
sprot_target db:uniprot_sprot|sp|P31904|HYPD2_BRADU 1 364 evalue:3.1e-124 qcov:96.00 identity:55.80;
tigrfam_acc TIGR00075;
tigrfam_desc hydrogenase expression/formation protein HypD;
tigrfam_mainrole Protein fate;
tigrfam_name hypD;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00075 evalue:3.6e-163 score:541.9 best_domain_score:541.6 name:TIGR00075;
43723 43938 CDS
ID metaerg.pl|12349
allec_ids 5.3.2.-;
allgo_ids GO:0006725; GO:0016853;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194513.1 1 71 evalue:7.0e-31 qcov:100.00 identity:91.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metacyc_pathway_id PWY-6214; PWY-5420; PWY-6336; 2ASDEG-PWY; PWY-5419;
metacyc_pathway_name 3-chlorocatechol degradation III (meta pathway);; catechol degradation II (meta-cleavage pathway);; protocatechuate degradation III (para-cleavage pathway);; orthanilate degradation;; catechol degradation to 2-hydroxypentadienoate II;;
metacyc_pathway_type 3-Chlorocatechol-Degradation;; Catechol-Degradation; Super-Pathways;; Protocatechuate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; Catechol-Degradation;;
pfam_acc PF01361; PF14552;
pfam_desc Tautomerase enzyme; Tautomerase enzyme;
pfam_id Tautomerase; Tautomerase_2;
pfam_target db:Pfam-A.hmm|PF01361.21 evalue:4.4e-17 score:61.0 best_domain_score:60.8 name:Tautomerase; db:Pfam-A.hmm|PF14552.6 evalue:6.1e-08 score:31.9 best_domain_score:31.3 name:Tautomerase_2;
tigrfam_acc TIGR00013;
tigrfam_desc 4-oxalocrotonate tautomerase family enzyme;
tigrfam_mainrole Energy metabolism;
tigrfam_name taut;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00013 evalue:1.7e-17 score:62.4 best_domain_score:62.2 name:TIGR00013;
43998 45095 CDS
ID metaerg.pl|12350
allec_ids 4.2.1.-;
allgo_ids GO:0016829;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092804.1 1 365 evalue:5.3e-191 qcov:100.00 identity:95.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metacyc_pathway_id PWY-5184; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; BENZCOA-PWY; CARNMET-PWY; PWY-6007; PWY-5061; FASYN-ELONG-PWY; CENTBENZCOA-PWY; PWY-6113; PWY-5367; PWYG-321; PWY1A0-6325; PWY0-881;
metacyc_pathway_name toluene degradation VI (anaerobic);; 4-hydroxyphenylacetate degradation;; anaerobic aromatic compound degradation (Thauera aromatica);; L-carnitine degradation I;; (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis II;; 6,7,4'-trihydroxyisoflavone biosynthesis;; fatty acid elongation -- saturated;; benzoyl-CoA degradation II (anaerobic);; superpathway of mycolate biosynthesis;; petroselinate biosynthesis;; mycolate biosynthesis;; actinorhodin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);;
metacyc_pathway_type Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; CARN-DEG;; DMNT-Biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis;; Benzoyl-CoA-Degradation;; Fatty-acid-biosynthesis; Super-Pathways;; Unsaturated-Fatty-Acids-Biosynthesis;; Fatty-acid-biosynthesis;; Antibiotic-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;;
pfam_acc PF00586; PF02769;
pfam_desc AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain;
pfam_id AIRS; AIRS_C;
pfam_target db:Pfam-A.hmm|PF00586.24 evalue:2.3e-18 score:65.9 best_domain_score:64.5 name:AIRS; db:Pfam-A.hmm|PF02769.22 evalue:5.6e-29 score:100.5 best_domain_score:99.8 name:AIRS_C;
sprot_desc Carbamoyl dehydratase HypE;
sprot_id sp|P26412|HYPE_RHOCA;
sprot_target db:uniprot_sprot|sp|P26412|HYPE_RHOCA 25 365 evalue:6.9e-105 qcov:93.40 identity:56.30;
tigrfam_acc TIGR02124;
tigrfam_desc hydrogenase expression/formation protein HypE;
tigrfam_name hypE;
tigrfam_target db:TIGRFAMs.hmm|TIGR02124 evalue:1.2e-149 score:496.9 best_domain_score:496.8 name:TIGR02124;
45052 45594 CDS
ID metaerg.pl|12351
allgo_ids GO:0016151; GO:0051604;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF01155;
pfam_desc Hydrogenase/urease nickel incorporation, metallochaperone, hypA;
pfam_id HypA;
pfam_target db:Pfam-A.hmm|PF01155.19 evalue:1.1e-29 score:102.0 best_domain_score:102.0 name:HypA;
tigrfam_acc TIGR00100;
tigrfam_desc hydrogenase nickel insertion protein HypA;
tigrfam_mainrole Protein fate;
tigrfam_name hypA;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00100 evalue:1.1e-25 score:89.1 best_domain_score:89.1 name:TIGR00100;
45597 46448 CDS
ID metaerg.pl|12352
allgo_ids GO:0005525; GO:0003924; GO:0016151; GO:0051604;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194510.1 1 283 evalue:8.4e-152 qcov:100.00 identity:95.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF02492;
pfam_desc CobW/HypB/UreG, nucleotide-binding domain;
pfam_id cobW;
pfam_target db:Pfam-A.hmm|PF02492.19 evalue:2.7e-33 score:114.3 best_domain_score:114.0 name:cobW;
sprot_desc Hydrogenase maturation factor HypB;
sprot_id sp|P28155|HYPB_RHILV;
sprot_target db:uniprot_sprot|sp|P28155|HYPB_RHILV 64 275 evalue:9.0e-68 qcov:74.90 identity:59.00;
tigrfam_acc TIGR00073;
tigrfam_desc hydrogenase accessory protein HypB;
tigrfam_mainrole Protein fate;
tigrfam_name hypB;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00073 evalue:1.2e-85 score:285.5 best_domain_score:285.1 name:TIGR00073;
46789 47490 CDS
ID metaerg.pl|12353
allgo_ids GO:0006744;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194509.1 1 226 evalue:2.2e-113 qcov:97.00 identity:88.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF05019;
pfam_desc Coenzyme Q (ubiquinone) biosynthesis protein Coq4;
pfam_id Coq4;
pfam_target db:Pfam-A.hmm|PF05019.13 evalue:5.7e-21 score:74.1 best_domain_score:73.7 name:Coq4;
tm_num 1;
46789 47490 transmembrane_helix
ID metaerg.pl|12354
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
topology o47236-47304i;
47953 47582 CDS
ID metaerg.pl|12355
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092800.1 1 123 evalue:7.1e-63 qcov:100.00 identity:94.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
48950 47946 CDS
ID metaerg.pl|12356
allgo_ids GO:0016705; GO:0055114;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092799.1 1 334 evalue:2.1e-178 qcov:100.00 identity:93.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:7.5e-57 score:192.3 best_domain_score:192.1 name:Bac_luciferase;
49438 49061 CDS
ID metaerg.pl|12357
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092798.1 1 125 evalue:9.4e-63 qcov:100.00 identity:94.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
50083 49772 CDS
ID metaerg.pl|12358
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194505.1 1 103 evalue:2.5e-53 qcov:100.00 identity:99.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
50352 50086 CDS
ID metaerg.pl|12359
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092796.1 1 88 evalue:2.7e-40 qcov:100.00 identity:96.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
50819 50394 CDS
ID metaerg.pl|12360
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092795.1 1 141 evalue:2.0e-61 qcov:100.00 identity:93.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
tm_num 2;
50819 50394 transmembrane_helix
ID metaerg.pl|12361
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
topology i50412-50480o50667-50735i;
51799 52752 CDS
ID metaerg.pl|12362
allec_ids 2.5.1.47;
allgo_ids GO:0005737; GO:0004124; GO:0080146; GO:0030170; GO:0006535;
allko_ids K01733; K01697; K13034; K01754; K12339; K01738; K10150;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092794.1 1 316 evalue:1.5e-165 qcov:99.70 identity:97.50;
kegg_pathway_id 00450; 00750; 00920; 00271; 00290; 00260; 00272;
kegg_pathway_name Selenoamino acid metabolism; Vitamin B6 metabolism; Sulfur metabolism; Methionine metabolism; Valine, leucine and isoleucine biosynthesis; Glycine, serine and threonine metabolism; Cysteine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metacyc_pathway_id CYSTSYN-PWY; SULFATE-CYS-PWY;
metacyc_pathway_name L-cysteine biosynthesis I;; superpathway of sulfate assimilation and cysteine biosynthesis;;
metacyc_pathway_type CYSTEINE-SYN;; Sulfur-Metabolism; Super-Pathways;;
pfam_acc PF00291;
pfam_desc Pyridoxal-phosphate dependent enzyme;
pfam_id PALP;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:1.1e-65 score:221.2 best_domain_score:221.0 name:PALP;
sprot_desc Cysteine synthase;
sprot_id sp|P73410|CYSK_SYNY3;
sprot_target db:uniprot_sprot|sp|P73410|CYSK_SYNY3 1 311 evalue:8.9e-133 qcov:98.10 identity:76.50;
tigrfam_acc TIGR01136; TIGR01139;
tigrfam_desc cysteine synthase; cysteine synthase A;
tigrfam_mainrole Amino acid biosynthesis; Amino acid biosynthesis;
tigrfam_name cysKM; cysK;
tigrfam_sub1role Serine family; Serine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01136 evalue:6.6e-133 score:441.8 best_domain_score:441.6 name:TIGR01136; db:TIGRFAMs.hmm|TIGR01139 evalue:8.3e-140 score:464.4 best_domain_score:464.2 name:TIGR01139;
53334 52864 CDS
ID metaerg.pl|12363
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092793.1 1 156 evalue:3.4e-78 qcov:100.00 identity:93.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF03960;
pfam_desc ArsC family;
pfam_id ArsC;
pfam_target db:Pfam-A.hmm|PF03960.15 evalue:4.2e-10 score:38.7 best_domain_score:38.4 name:ArsC;
sprot_desc Uncharacterized 15.7 kDa protein in draG 3'region;
sprot_id sp|P14301|YDRA_RHORU;
sprot_target db:uniprot_sprot|sp|P14301|YDRA_RHORU 1 120 evalue:8.8e-33 qcov:76.90 identity:50.80;
tigrfam_acc TIGR01616;
tigrfam_desc nitrogenase-associated protein;
tigrfam_mainrole Unknown function;
tigrfam_name nitro_assoc;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR01616 evalue:6.6e-52 score:174.0 best_domain_score:173.9 name:TIGR01616;
54070 53456 CDS
ID metaerg.pl|12364
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094040.1 3 204 evalue:9.2e-108 qcov:99.00 identity:93.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
54749 54264 CDS
ID metaerg.pl|12365
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092792.1 1 160 evalue:3.0e-77 qcov:99.40 identity:91.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
55536 54949 CDS
ID metaerg.pl|12366
allec_ids 1.9.3.1;
allgo_ids GO:0015002; GO:0016020; GO:0016021; GO:0005886; GO:0004129; GO:0019646;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092791.1 1 195 evalue:6.3e-106 qcov:100.00 identity:98.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00510;
pfam_desc Cytochrome c oxidase subunit III;
pfam_id COX3;
pfam_target db:Pfam-A.hmm|PF00510.18 evalue:7.2e-31 score:107.2 best_domain_score:107.0 name:COX3;
sprot_desc Cytochrome c oxidase subunit 3;
sprot_id sp|P50677|COX3_THEVL;
sprot_target db:uniprot_sprot|sp|P50677|COX3_THEVL 10 195 evalue:7.0e-80 qcov:95.40 identity:75.30;
tm_num 5;
55536 54949 transmembrane_helix
ID metaerg.pl|12367
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
topology i55006-55074o55117-55185i55222-55290o55333-55401i55462-55530o;
57359 55692 CDS
ID metaerg.pl|12368
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0009060; GO:0016021; GO:0020037; GO:0055114; GO:0005886; GO:0070469; GO:0046872; GO:0015990; GO:0006119;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092790.1 1 555 evalue:0.0e+00 qcov:100.00 identity:98.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metabolic_acc TIGR02891;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, caa3-type;gene:CoxA;;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00115;
pfam_desc Cytochrome C and Quinol oxidase polypeptide I;
pfam_id COX1;
pfam_target db:Pfam-A.hmm|PF00115.20 evalue:2.4e-154 score:513.6 best_domain_score:513.4 name:COX1;
sprot_desc Cytochrome c oxidase subunit 1;
sprot_id sp|P50676|COX1_THEVL;
sprot_target db:uniprot_sprot|sp|P50676|COX1_THEVL 1 546 evalue:2.1e-270 qcov:98.40 identity:81.50;
tigrfam_acc TIGR02891;
tigrfam_desc cytochrome c oxidase, subunit I;
tigrfam_mainrole Energy metabolism;
tigrfam_name CtaD_CoxA;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02891 evalue:2e-210 score:698.8 best_domain_score:698.6 name:TIGR02891;
tm_num 12;
57359 55692 transmembrane_helix
ID metaerg.pl|12369
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
topology i55812-55880o55962-56030i56067-56135o56193-56261i56322-56390o56448-56516i56553-56621o56664-56732i56769-56837o56880-56948i56982-57035o57093-57161i;
58406 57435 CDS
ID metaerg.pl|12370
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0005507; GO:0016020; GO:0016021; GO:0005886; GO:0070469;
allko_ids K00376;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092789.1 1 323 evalue:9.5e-176 qcov:100.00 identity:96.90;
kegg_pathway_id 00910;
kegg_pathway_name Nitrogen metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metabolic_acc TIGR02866;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, caa3-type;gene:CoxB;;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00116; PF02790;
pfam_desc Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain;
pfam_id COX2; COX2_TM;
pfam_target db:Pfam-A.hmm|PF00116.20 evalue:1e-16 score:60.1 best_domain_score:57.0 name:COX2; db:Pfam-A.hmm|PF02790.15 evalue:1.2e-17 score:63.1 best_domain_score:63.1 name:COX2_TM;
sprot_desc Cytochrome c oxidase subunit 2;
sprot_id sp|P98054|COX2_THEVL;
sprot_target db:uniprot_sprot|sp|P98054|COX2_THEVL 1 322 evalue:7.0e-109 qcov:99.70 identity:59.00;
tigrfam_acc TIGR02866;
tigrfam_desc cytochrome c oxidase, subunit II;
tigrfam_mainrole Energy metabolism;
tigrfam_name CoxB;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02866 evalue:8.7e-52 score:174.8 best_domain_score:140.0 name:TIGR02866;
tm_num 3;
58406 57435 transmembrane_helix
ID metaerg.pl|12371
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
topology i57447-57515o57573-57641i57702-57770o;
59317 59024 CDS
ID metaerg.pl|12372
allgo_ids GO:0051539; GO:0046872; GO:0009399; GO:0055114;
allko_ids K00170; K00176; K05588; K00207; K03388; K08264; K08349; K00390; K00338; K00265; K00124; K00533; K00172; K05580; K11181; K00171; K00441; K00205; K00226; K00335; K00125; K00380; K00122; K11260; K04014; K00204; K00873; K00337; K00245; K00123; K00395; K00240; K00266; K00532; K03390; K00443;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092788.1 1 97 evalue:1.3e-51 qcov:100.00 identity:96.90;
kegg_pathway_id 00620; 00450; 00630; 00650; 00640; 00790; 00720; 00983; 00240; 00632; 00633; 00251; 02020; 00910; 00410; 00190; 00130; 00680; 00920; 00710; 00010; 00020; 00770; 00230;
kegg_pathway_name Pyruvate metabolism; Selenoamino acid metabolism; Glyoxylate and dicarboxylate metabolism; Butanoate metabolism; Propanoate metabolism; Folate biosynthesis; Reductive carboxylate cycle (CO2 fixation); Drug metabolism - other enzymes; Pyrimidine metabolism; Benzoate degradation via CoA ligation; Trinitrotoluene degradation; Glutamate metabolism; Two-component system - General; Nitrogen metabolism; beta-Alanine metabolism; Oxidative phosphorylation; Ubiquinone biosynthesis; Methane metabolism; Sulfur metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Pantothenate and CoA biosynthesis; Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00037; PF13237; PF13484; PF12797; PF14697; PF17179; PF12837; PF12838; PF13183; PF13187;
pfam_desc 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S double cluster binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id Fer4; Fer4_10; Fer4_16; Fer4_2; Fer4_21; Fer4_22; Fer4_6; Fer4_7; Fer4_8; Fer4_9;
pfam_target db:Pfam-A.hmm|PF00037.27 evalue:4.1e-13 score:47.8 best_domain_score:30.9 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:2.1e-10 score:39.8 best_domain_score:35.4 name:Fer4_10; db:Pfam-A.hmm|PF13484.6 evalue:2.6e-08 score:33.9 best_domain_score:33.3 name:Fer4_16; db:Pfam-A.hmm|PF12797.7 evalue:7e-08 score:31.4 best_domain_score:18.6 name:Fer4_2; db:Pfam-A.hmm|PF14697.6 evalue:2.2e-09 score:36.5 best_domain_score:34.9 name:Fer4_21; db:Pfam-A.hmm|PF17179.4 evalue:5e-07 score:29.7 best_domain_score:20.7 name:Fer4_22; db:Pfam-A.hmm|PF12837.7 evalue:9.8e-13 score:46.8 best_domain_score:30.8 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:5.4e-11 score:42.2 best_domain_score:41.6 name:Fer4_7; db:Pfam-A.hmm|PF13183.6 evalue:2.2e-07 score:30.4 best_domain_score:30.0 name:Fer4_8; db:Pfam-A.hmm|PF13187.6 evalue:2.6e-09 score:36.4 best_domain_score:35.6 name:Fer4_9;
sprot_desc Ferredoxin-3;
sprot_id sp|P58567|FER3_NOSS1;
sprot_target db:uniprot_sprot|sp|P58567|FER3_NOSS1 1 97 evalue:3.2e-33 qcov:100.00 identity:67.00;
tigrfam_acc TIGR02936;
tigrfam_desc ferredoxin III, nif-specific;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name fdxN_nitrog;
tigrfam_sub1role Nitrogen fixation;
tigrfam_target db:TIGRFAMs.hmm|TIGR02936 evalue:1.9e-42 score:142.5 best_domain_score:142.3 name:TIGR02936;
60306 61919 CDS
ID metaerg.pl|12373
allgo_ids GO:0043565;
allko_ids K00204; K00558; K11260; K04014; K00443; K00265; K00533; K00124; K03388; K00176; K00170; K08349; K00205; K00171; K00441; K01486; K00012; K00335;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092787.1 1 536 evalue:1.9e-301 qcov:99.80 identity:93.50;
kegg_pathway_id 00790; 00650; 00640; 00630; 00620; 00520; 00271; 00720; 00680; 00130; 00190; 00040; 00910; 02020; 00633; 00251; 00230; 00500; 00020; 00010;
kegg_pathway_name Folate biosynthesis; Butanoate metabolism; Propanoate metabolism; Glyoxylate and dicarboxylate metabolism; Pyruvate metabolism; Nucleotide sugars metabolism; Methionine metabolism; Reductive carboxylate cycle (CO2 fixation); Methane metabolism; Ubiquinone biosynthesis; Oxidative phosphorylation; Pentose and glucuronate interconversions; Nitrogen metabolism; Two-component system - General; Trinitrotoluene degradation; Glutamate metabolism; Purine metabolism; Starch and sucrose metabolism; Citrate cycle (TCA cycle); Glycolysis / Gluconeogenesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00037; PF01381; PF13560;
pfam_desc 4Fe-4S binding domain; Helix-turn-helix; Helix-turn-helix domain;
pfam_id Fer4; HTH_3; HTH_31;
pfam_target db:Pfam-A.hmm|PF00037.27 evalue:2.4e-05 score:23.2 best_domain_score:21.1 name:Fer4; db:Pfam-A.hmm|PF01381.22 evalue:1.2e-06 score:27.7 best_domain_score:26.4 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:5.2e-08 score:32.4 best_domain_score:31.3 name:HTH_31;
62536 61916 CDS
ID metaerg.pl|12374
allgo_ids GO:0016829;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092786.1 1 204 evalue:2.2e-101 qcov:99.00 identity:87.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF06314;
pfam_desc Acetoacetate decarboxylase (ADC);
pfam_id ADC;
pfam_target db:Pfam-A.hmm|PF06314.11 evalue:4.5e-26 score:91.1 best_domain_score:91.0 name:ADC;
64796 62886 CDS
ID metaerg.pl|12375
allgo_ids GO:0005975; GO:0016773; GO:0005524; GO:0051082; GO:0006457;
allko_ids K04043;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092784.1 1 636 evalue:0.0e+00 qcov:100.00 identity:97.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF02782; PF14450; PF00012; PF06723;
pfam_desc FGGY family of carbohydrate kinases, C-terminal domain; Cell division protein FtsA; Hsp70 protein; MreB/Mbl protein;
pfam_id FGGY_C; FtsA; HSP70; MreB_Mbl;
pfam_target db:Pfam-A.hmm|PF02782.16 evalue:6e-05 score:22.1 best_domain_score:20.5 name:FGGY_C; db:Pfam-A.hmm|PF14450.6 evalue:5.1e-09 score:35.7 best_domain_score:22.2 name:FtsA; db:Pfam-A.hmm|PF00012.20 evalue:5.6e-264 score:876.1 best_domain_score:875.9 name:HSP70; db:Pfam-A.hmm|PF06723.13 evalue:1.9e-20 score:72.2 best_domain_score:65.0 name:MreB_Mbl;
sprot_desc Chaperone protein dnaK2;
sprot_id sp|Q8YW74|DNAK2_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YW74|DNAK2_NOSS1 1 636 evalue:1.2e-309 qcov:100.00 identity:88.50;
tigrfam_acc TIGR02350;
tigrfam_desc chaperone protein DnaK;
tigrfam_mainrole Protein fate;
tigrfam_name prok_dnaK;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR02350 evalue:5.9e-298 score:988.4 best_domain_score:988.1 name:TIGR02350;
65339 66142 CDS
ID metaerg.pl|12376
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006194491.1 1 267 evalue:3.2e-129 qcov:100.00 identity:92.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF11103;
pfam_desc Protein of unknown function (DUF2887);
pfam_id DUF2887;
pfam_target db:Pfam-A.hmm|PF11103.8 evalue:1.1e-84 score:282.6 best_domain_score:282.3 name:DUF2887;
tigrfam_acc TIGR01784;
tigrfam_desc conserved hypothetical protein;
tigrfam_name T_den_put_tspse;
tigrfam_target db:TIGRFAMs.hmm|TIGR01784 evalue:2.5e-50 score:171.0 best_domain_score:170.8 name:TIGR01784;
66202 67254 CDS
ID metaerg.pl|12377
allec_ids 1.3.1.-;
allgo_ids GO:0005737; GO:0016627; GO:0055114; GO:0050660; GO:0000049; GO:0017150;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092782.1 1 350 evalue:1.7e-194 qcov:100.00 identity:97.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metacyc_pathway_id PWY-5063; PWY-5064; PWY-5863; PWY-5466; PWY-5972; PWY-3461; PWY-5729; PWY-5367; PWY5F9-3233; PWY1A0-6325; PWY-6088; HCAMHPDEG-PWY; PWY-5393; PWY-3481;
metacyc_pathway_name phytyl diphosphate biosynthesis;; chlorophyll a biosynthesis II;; superpathway of phylloquinol biosynthesis;; matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);; L-tyrosine biosynthesis II;; vestitol and sativan biosynthesis;; petroselinate biosynthesis;; phthalate degradation (aerobic);; actinorhodin biosynthesis;; 3-chlorobenzoate degradation I (via chlorocatechol);; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; raspberry ketone biosynthesis;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;;
metacyc_pathway_type Phytyl-Diphosphate-Biosynthesis;; Chlorophyll-a-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; LIGNAN-SYN;; Stearate-Biosynthesis;; TYROSINE-SYN;; ISOFLAVONOID-SYN;; Unsaturated-Fatty-Acids-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Antibiotic-Biosynthesis;; 3-Chlorobenzoate-Degradation;; Phenolic-Compounds-Degradation;; POLYKETIDE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF01180; PF01207; PF00724;
pfam_desc Dihydroorotate dehydrogenase; Dihydrouridine synthase (Dus); NADH:flavin oxidoreductase / NADH oxidase family;
pfam_id DHO_dh; Dus; Oxidored_FMN;
pfam_target db:Pfam-A.hmm|PF01180.21 evalue:6.7e-05 score:21.5 best_domain_score:14.5 name:DHO_dh; db:Pfam-A.hmm|PF01207.17 evalue:3.8e-102 score:340.8 best_domain_score:340.4 name:Dus; db:Pfam-A.hmm|PF00724.20 evalue:0.00018 score:20.2 best_domain_score:11.3 name:Oxidored_FMN;
sprot_desc Probable tRNA-dihydrouridine synthase 1;
sprot_id sp|Q55724|DUS1_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55724|DUS1_SYNY3 5 331 evalue:3.0e-137 qcov:93.40 identity:71.90;
tigrfam_acc TIGR00737;
tigrfam_desc putative TIM-barrel protein, nifR3 family;
tigrfam_mainrole Unknown function;
tigrfam_name nifR3_yhdG;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00737 evalue:7.2e-124 score:412.3 best_domain_score:412.1 name:TIGR00737;
70444 67322 CDS
ID metaerg.pl|12378
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092781.1 1 1040 evalue:0.0e+00 qcov:100.00 identity:93.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF12965;
pfam_desc Domain of unknown function (DUF3854);
pfam_id DUF3854;
pfam_target db:Pfam-A.hmm|PF12965.7 evalue:8.4e-46 score:154.4 best_domain_score:152.6 name:DUF3854;
72265 70745 CDS
ID metaerg.pl|12379
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005829; GO:0061630; GO:0045454; GO:0043161; GO:0000209;
allko_ids K11065;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092780.1 1 506 evalue:1.8e-277 qcov:100.00 identity:90.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
pfam_acc PF00578; PF01436; PF00085; PF13905;
pfam_desc AhpC/TSA family; NHL repeat; Thioredoxin; Thioredoxin-like;
pfam_id AhpC-TSA; NHL; Thioredoxin; Thioredoxin_8;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:3.8e-10 score:39.0 best_domain_score:37.8 name:AhpC-TSA; db:Pfam-A.hmm|PF01436.21 evalue:9.9e-22 score:75.1 best_domain_score:19.4 name:NHL; db:Pfam-A.hmm|PF00085.20 evalue:4.7e-06 score:25.8 best_domain_score:15.5 name:Thioredoxin; db:Pfam-A.hmm|PF13905.6 evalue:3.6e-12 score:45.7 best_domain_score:44.6 name:Thioredoxin_8;
sprot_desc NHL repeat-containing protein 2;
sprot_id sp|Q5ZI67|NHLC2_CHICK;
sprot_target db:uniprot_sprot|sp|Q5ZI67|NHLC2_CHICK 8 483 evalue:2.7e-107 qcov:94.10 identity:43.70;
72458 72784 CDS
ID metaerg.pl|12380
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_A;s__Tolypothrix_A bouteillei;
genomedb_acc GCF_000760695.2;
genomedb_target db:genomedb|GCF_000760695.2|WP_038085389.1 1 108 evalue:5.5e-27 qcov:100.00 identity:61.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
sp YES;
72458 72541 signal_peptide
ID metaerg.pl|12381
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
73039 75702 CDS
ID metaerg.pl|12382
allec_ids 3.6.3.-;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_A;s__Tolypothrix_A bouteillei;
genomedb_acc GCF_000760695.2;
genomedb_target db:genomedb|GCF_000760695.2|WP_063779452.1 4 852 evalue:2.5e-279 qcov:95.70 identity:58.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6135; PWY-6171; PWY-6188; PWY-6166;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF00122; PF00702; PF08282;
pfam_desc E1-E2 ATPase; haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase;
pfam_id E1-E2_ATPase; Hydrolase; Hydrolase_3;
pfam_target db:Pfam-A.hmm|PF00122.20 evalue:6.1e-32 score:109.8 best_domain_score:108.8 name:E1-E2_ATPase; db:Pfam-A.hmm|PF00702.26 evalue:3e-32 score:111.9 best_domain_score:111.2 name:Hydrolase; db:Pfam-A.hmm|PF08282.12 evalue:0.00012 score:21.1 best_domain_score:18.3 name:Hydrolase_3;
tigrfam_acc TIGR01494; TIGR01512; TIGR01525;
tigrfam_desc HAD ATPase, P-type, family IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ATPase_P-type; ATPase-IB2_Cd; ATPase-IB_hvy;
tigrfam_sub1role Cations and iron carrying compounds;
tigrfam_target db:TIGRFAMs.hmm|TIGR01494 evalue:5.7e-66 score:222.0 best_domain_score:218.8 name:TIGR01494; db:TIGRFAMs.hmm|TIGR01512 evalue:3.6e-100 score:335.2 best_domain_score:178.5 name:TIGR01512; db:TIGRFAMs.hmm|TIGR01525 evalue:1.1e-144 score:482.5 best_domain_score:482.1 name:TIGR01525;
76272 76024 CDS
ID metaerg.pl|12383
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00567052; 72.354; 0.0233537; 72.4247; 0.041657;
>Feature NODE_96_length_77433_cov_24.9586
1522 65 CDS
ID metaerg.pl|12384
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192433.1 1 483 evalue:1.9e-164 qcov:99.60 identity:74.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF01551;
pfam_desc Peptidase family M23;
pfam_id Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF01551.22 evalue:6.7e-29 score:99.2 best_domain_score:98.3 name:Peptidase_M23;
sp YES;
65 145 signal_peptide
ID metaerg.pl|12385
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
2011 2775 CDS
ID metaerg.pl|12386
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192431.1 3 251 evalue:5.3e-81 qcov:98.00 identity:59.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00583; PF13673; PF18467;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Domain of unknown function (DUF5613);
pfam_id Acetyltransf_1; Acetyltransf_10; DUF5613;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:3.1e-08 score:33.1 best_domain_score:32.2 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:1.5e-09 score:37.1 best_domain_score:36.3 name:Acetyltransf_10; db:Pfam-A.hmm|PF18467.1 evalue:9.8e-21 score:73.2 best_domain_score:73.2 name:DUF5613;
2772 3854 CDS
ID metaerg.pl|12387
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192429.1 1 354 evalue:7.0e-111 qcov:98.30 identity:57.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00583;
pfam_desc Acetyltransferase (GNAT) family;
pfam_id Acetyltransf_1;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.7e-06 score:27.5 best_domain_score:26.4 name:Acetyltransf_1;
5655 3958 CDS
ID metaerg.pl|12388
allec_ids 3.4.24.-;
allgo_ids GO:0004222; GO:0006508;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091482231.1 1 565 evalue:5.5e-304 qcov:100.00 identity:89.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF01432;
pfam_desc Peptidase family M3;
pfam_id Peptidase_M3;
pfam_target db:Pfam-A.hmm|PF01432.20 evalue:1e-29 score:103.4 best_domain_score:78.9 name:Peptidase_M3;
tigrfam_acc TIGR02289;
tigrfam_desc oligoendopeptidase, M3 family;
tigrfam_name M3_not_pepF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02289 evalue:4e-198 score:658.6 best_domain_score:658.4 name:TIGR02289;
5766 7046 CDS
ID metaerg.pl|12389
allgo_ids GO:0001216; GO:0016987; GO:0003677; GO:0003899; GO:0006352;
allko_ids K03092;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091266318.1 1 424 evalue:1.2e-157 qcov:99.50 identity:68.20;
kegg_pathway_id 03020; 05111;
kegg_pathway_name RNA polymerase; Vibrio cholerae pathogenic cycle;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00309; PF04963; PF04552;
pfam_desc Sigma-54 factor, Activator interacting domain (AID) ; Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain;
pfam_id Sigma54_AID; Sigma54_CBD; Sigma54_DBD;
pfam_target db:Pfam-A.hmm|PF00309.20 evalue:4.6e-08 score:32.0 best_domain_score:32.0 name:Sigma54_AID; db:Pfam-A.hmm|PF04963.13 evalue:7.5e-38 score:129.4 best_domain_score:127.6 name:Sigma54_CBD; db:Pfam-A.hmm|PF04552.13 evalue:1.7e-49 score:166.8 best_domain_score:166.2 name:Sigma54_DBD;
sprot_desc RNA polymerase sigma-54 factor;
sprot_id sp|P24219|RP54_BACSU;
sprot_target db:uniprot_sprot|sp|P24219|RP54_BACSU 9 425 evalue:2.9e-46 qcov:97.90 identity:32.50;
tigrfam_acc TIGR02395;
tigrfam_desc RNA polymerase sigma-54 factor;
tigrfam_mainrole Transcription;
tigrfam_name rpoN_sigma;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR02395 evalue:8.1e-111 score:370.3 best_domain_score:370.0 name:TIGR02395;
8080 7139 CDS
ID metaerg.pl|12390
allgo_ids GO:0009401; GO:0016021; GO:0005886;
allko_ids K02795; K02796;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481578.1 1 313 evalue:8.4e-153 qcov:100.00 identity:87.90;
kegg_pathway_id 02060;
kegg_pathway_name Phosphotransferase system (PTS);
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF03613;
pfam_desc PTS system mannose/fructose/sorbose family IID component;
pfam_id EIID-AGA;
pfam_target db:Pfam-A.hmm|PF03613.14 evalue:5e-114 score:379.2 best_domain_score:379.0 name:EIID-AGA;
sprot_desc PTS system mannose-specific EIID component;
sprot_id sp|P69807|PTND_ECO57;
sprot_target db:uniprot_sprot|sp|P69807|PTND_ECO57 8 313 evalue:2.7e-81 qcov:97.80 identity:48.90;
tigrfam_acc TIGR00828;
tigrfam_desc PTS system, mannose/fructose/sorbose family, IID component;
tigrfam_mainrole Signal transduction;
tigrfam_name EIID-AGA;
tigrfam_sub1role PTS;
tigrfam_target db:TIGRFAMs.hmm|TIGR00828 evalue:9.2e-108 score:358.8 best_domain_score:303.3 name:TIGR00828;
tm_num 4;
8080 7139 transmembrane_helix
ID metaerg.pl|12391
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology o7517-7585i7703-7771o7943-7996i8015-8074o;
8897 8100 CDS
ID metaerg.pl|12392
allgo_ids GO:0009401; GO:0016021; GO:0005886;
allko_ids K02795;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481580.1 1 265 evalue:1.6e-128 qcov:100.00 identity:95.10;
kegg_pathway_id 02060;
kegg_pathway_name Phosphotransferase system (PTS);
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF03609;
pfam_desc PTS system sorbose-specific iic component;
pfam_id EII-Sor;
pfam_target db:Pfam-A.hmm|PF03609.14 evalue:2.4e-69 score:232.5 best_domain_score:232.3 name:EII-Sor;
sp YES;
sprot_desc PTS system mannose-specific EIIC component;
sprot_id sp|P69803|PTNC_ECO57;
sprot_target db:uniprot_sprot|sp|P69803|PTNC_ECO57 4 263 evalue:3.9e-65 qcov:98.10 identity:52.50;
tm_num 5;
8100 8159 signal_peptide
ID metaerg.pl|12393
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
8897 8100 transmembrane_helix
ID metaerg.pl|12394
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology i8106-8165o8379-8447i8508-8576o8619-8687i8706-8807o;
9899 8925 CDS
ID metaerg.pl|12395
allec_ids 2.7.1.191; 2.7.1.69;
allgo_ids GO:0009401; GO:0016021; GO:0005737; GO:0005886; GO:0016301; GO:0008982;
allko_ids K10984; K11194; K02821; K02812; K02769; K02745; K02793; K02813; K02744; K02794;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481583.1 1 324 evalue:1.3e-169 qcov:100.00 identity:93.20;
kegg_pathway_id 02060;
kegg_pathway_name Phosphotransferase system (PTS);
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF03610; PF03830;
pfam_desc PTS system fructose IIA component; PTS system sorbose subfamily IIB component;
pfam_id EIIA-man; PTSIIB_sorb;
pfam_target db:Pfam-A.hmm|PF03610.16 evalue:1.5e-34 score:118.0 best_domain_score:117.3 name:EIIA-man; db:Pfam-A.hmm|PF03830.15 evalue:3.5e-53 score:179.0 best_domain_score:178.4 name:PTSIIB_sorb;
sprot_desc PTS system mannose-specific EIIAB component;Mannose-specific phosphotransferase enzyme IIA component;Mannose-specific phosphotransferase enzyme IIB component;
sprot_id sp|Q5XAF5|PTNAB_STRP6;
sprot_target db:uniprot_sprot|sp|Q5XAF5|PTNAB_STRP6 2 319 evalue:2.1e-97 qcov:98.10 identity:56.30;
tigrfam_acc TIGR00824; TIGR00854;
tigrfam_desc PTS system, mannose/fructose/sorbose family, IIA component; PTS system, mannose/fructose/sorbose family, IIB component;
tigrfam_mainrole Signal transduction; Signal transduction;
tigrfam_name EIIA-man; pts-sorbose;
tigrfam_sub1role PTS; PTS;
tigrfam_target db:TIGRFAMs.hmm|TIGR00824 evalue:1.6e-29 score:101.5 best_domain_score:100.9 name:TIGR00824; db:TIGRFAMs.hmm|TIGR00854 evalue:5.5e-49 score:165.3 best_domain_score:164.5 name:TIGR00854;
10439 9948 CDS
ID metaerg.pl|12396
allec_ids 2.7.1.191; 2.7.1.69;
allgo_ids GO:0005737; GO:0008982; GO:0009401; GO:0016021; GO:0005886; GO:0016301;
allko_ids K02744; K02813; K02793; K02794; K11194; K10984; K02745; K02769; K02812;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481586.1 1 163 evalue:3.9e-69 qcov:100.00 identity:82.80;
kegg_pathway_id 02060;
kegg_pathway_name Phosphotransferase system (PTS);
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF03830;
pfam_desc PTS system sorbose subfamily IIB component;
pfam_id PTSIIB_sorb;
pfam_target db:Pfam-A.hmm|PF03830.15 evalue:1.8e-50 score:170.2 best_domain_score:170.0 name:PTSIIB_sorb;
sprot_desc PTS system mannose-specific EIIAB component;Mannose-specific phosphotransferase enzyme IIA component;Mannose-specific phosphotransferase enzyme IIB component;
sprot_id sp|P69799|PTNAB_ECO57;
sprot_target db:uniprot_sprot|sp|P69799|PTNAB_ECO57 1 159 evalue:1.0e-39 qcov:97.50 identity:54.70;
tigrfam_acc TIGR00854;
tigrfam_desc PTS system, mannose/fructose/sorbose family, IIB component;
tigrfam_mainrole Signal transduction;
tigrfam_name pts-sorbose;
tigrfam_sub1role PTS;
tigrfam_target db:TIGRFAMs.hmm|TIGR00854 evalue:1.1e-48 score:164.2 best_domain_score:164.1 name:TIGR00854;
13502 10650 CDS
ID metaerg.pl|12397
allec_ids 2.7.1.-;
allgo_ids GO:0005524; GO:0016021; GO:0003677; GO:0016301; GO:0003723; GO:0008134; GO:0009401; GO:0045893;
allko_ids K02793; K02744; K02794; K02812; K02821;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192399.1 1 948 evalue:0.0e+00 qcov:99.80 identity:74.20;
kegg_pathway_id 02060;
kegg_pathway_name Phosphotransferase system (PTS);
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id LIPA-CORESYN-PWY; PWY-6577; PWY0-1261; PWY-5107; PLPSAL-PWY; PWY0-163; LPSSYN-PWY; PWY0-845; P1-PWY; PWY-5381;
metacyc_pathway_name lipid A-core biosynthesis (E. coli K-12);; farnesylcysteine salvage pathway;; anhydromuropeptides recycling I;; phytol salvage pathway;; pyridoxal 5'-phosphate salvage I;; ; superpathway of lipopolysaccharide biosynthesis;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;; ; pyridine nucleotide cycling (plants);;
metacyc_pathway_type Glycan-Biosynthesis; Lipid-Biosynthesis;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Anhydromuropeptides-Recycling;; DITERPENOID-SYN;; Vitamin-B6-Biosynthesis;; ; Lipid-Biosynthesis; Super-Pathways;; Super-Pathways; Vitamin-B6-Biosynthesis;; ; NAD-Metabolism;;
pfam_acc PF00004; PF03610; PF01078; PF00874; PF00158; PF14532;
pfam_desc ATPase family associated with various cellular activities (AAA); PTS system fructose IIA component; Magnesium chelatase, subunit ChlI; PRD domain; Sigma-54 interaction domain; Sigma-54 interaction domain;
pfam_id AAA; EIIA-man; Mg_chelatase; PRD; Sigma54_activat; Sigma54_activ_2;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:7.2e-07 score:28.9 best_domain_score:24.1 name:AAA; db:Pfam-A.hmm|PF03610.16 evalue:1.4e-16 score:60.0 best_domain_score:58.4 name:EIIA-man; db:Pfam-A.hmm|PF01078.21 evalue:1.3e-05 score:23.9 best_domain_score:22.2 name:Mg_chelatase; db:Pfam-A.hmm|PF00874.20 evalue:7.8e-21 score:73.4 best_domain_score:50.2 name:PRD; db:Pfam-A.hmm|PF00158.26 evalue:2e-48 score:163.5 best_domain_score:162.3 name:Sigma54_activat; db:Pfam-A.hmm|PF14532.6 evalue:9.3e-06 score:25.0 best_domain_score:21.3 name:Sigma54_activ_2;
sprot_desc Transcriptional regulatory protein LevR;
sprot_id sp|P23914|LEVR_BACSU;
sprot_target db:uniprot_sprot|sp|P23914|LEVR_BACSU 1 891 evalue:6.1e-177 qcov:93.80 identity:39.20;
14890 14321 CDS
ID metaerg.pl|12398
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034301577.1 1 189 evalue:1.7e-79 qcov:100.00 identity:83.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
sp YES;
14321 14389 lipoprotein_signal_peptide
ID metaerg.pl|12399
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
15832 15254 CDS
ID metaerg.pl|12400
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192440.1 9 192 evalue:4.6e-61 qcov:95.80 identity:70.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
sp YES;
15254 15310 lipoprotein_signal_peptide
ID metaerg.pl|12401
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
17084 16236 CDS
ID metaerg.pl|12402
allec_ids 1.13.11.2;
allgo_ids GO:0018577; GO:0008198; GO:0019439; GO:0009636;
allko_ids K01759; K07104;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192392.1 1 279 evalue:1.5e-79 qcov:98.90 identity:54.60;
kegg_pathway_id 04011; 00620;
kegg_pathway_name MAPK signaling pathway - yeast; Pyruvate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id TOLUENE-DEG-DIOL-PWY; P183-PWY; PWY-5183; PWY-5641; PWY-5180; PWY-5420; PWY-5419; TOLUENE-DEG-2-OH-PWY;
metacyc_pathway_name toluene degradation to 2-hydroxypentadienoate (via toluene-cis-diol);; catechol degradation to 2-hydroxypentadienoate I;; superpathway of aerobic toluene degradation;; 2-nitrotoluene degradation;; toluene degradation I (aerobic) (via o-cresol);; catechol degradation II (meta-cleavage pathway);; catechol degradation to 2-hydroxypentadienoate II;; toluene degradation to 2-hydroxypentadienoate I (via o-cresol);;
metacyc_pathway_type TOLUENE-DEG;; Catechol-Degradation;; Super-Pathways; TOLUENE-DEG;; Nitro-Toluene-Degradation;; Super-Pathways; TOLUENE-DEG;; Catechol-Degradation; Super-Pathways;; Catechol-Degradation;; TOLUENE-DEG;;
pfam_acc PF14507; PF00903;
pfam_desc CppA C-terminal; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id CppA_C; Glyoxalase;
pfam_target db:Pfam-A.hmm|PF14507.6 evalue:3.8e-05 score:23.6 best_domain_score:22.4 name:CppA_C; db:Pfam-A.hmm|PF00903.25 evalue:1.3e-17 score:63.4 best_domain_score:36.7 name:Glyoxalase;
sprot_desc Catechol-2,3-dioxygenase;
sprot_id sp|P54721|CADE_BACSU;
sprot_target db:uniprot_sprot|sp|P54721|CADE_BACSU 1 272 evalue:1.9e-41 qcov:96.50 identity:35.50;
18869 17361 CDS
ID metaerg.pl|12403
allec_ids 1.14.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0016117; GO:0009405;
allko_ids K03388; K10210;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192385.1 1 500 evalue:1.2e-230 qcov:99.60 identity:78.20;
kegg_pathway_id 00790; 00906;
kegg_pathway_name Folate biosynthesis; Carotenoid biosynthesis - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-5288; TOLSULFDEG-PWY; 4TOLCARBDEG-PWY; PWY-5397; PWY-6475; CAROTENOID-PWY; PWY-5175; PWY-5366; PWY-5987; PWY-782; PWY-762; PWY-6287; PWY-5944; PWY-5367; PWY-5362; PWY-5942; PWY-5947;
metacyc_pathway_name astaxanthin biosynthesis (bacteria, fungi, algae);; 4-toluenesulfonate degradation I;; 4-toluenecarboxylate degradation;; crocetin biosynthesis;; trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria);; superpathway of carotenoid biosynthesis in plants;; lactucaxanthin biosynthesis;; palmitoleate biosynthesis II (plants and bacteria);; sorgoleone biosynthesis;; glycolipid desaturation;; phospholipid desaturation;; neurosporene biosynthesis;; zeaxanthin biosynthesis;; petroselinate biosynthesis;; sapienate biosynthesis;; trans-lycopene biosynthesis I;; lutein biosynthesis;;
metacyc_pathway_type C40-Carotenoids-Biosynthesis;; 4-Toluenesulfonate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; APOCAROTENOID-SYN;; Lycopene-Biosynthesis;; C40-Carotenoids-Biosynthesis; Super-Pathways;; C40-Carotenoids-Biosynthesis;; Palmitoleate-Biosynthesis;; QUINONE-SYN;; Glycolipids-Biosynthesis;; Phospholipid-Biosynthesis;; C40-Carotenoids-Biosynthesis;; C40-Carotenoids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Lycopene-Biosynthesis; Super-Pathways;; C40-Carotenoids-Biosynthesis;;
pfam_acc PF01593; PF01266; PF00890; PF12831; PF01134; PF03486; PF13450; PF00070; PF07992;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; DAO; FAD_binding_2; FAD_oxidored; GIDA; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:8.6e-26 score:90.4 best_domain_score:89.7 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:1.8e-11 score:43.5 best_domain_score:38.9 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:3e-09 score:35.7 best_domain_score:22.3 name:FAD_binding_2; db:Pfam-A.hmm|PF12831.7 evalue:4.6e-09 score:35.3 best_domain_score:29.4 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:4.3e-06 score:25.3 best_domain_score:21.5 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:7e-09 score:34.1 best_domain_score:22.4 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:7.4e-14 score:51.0 best_domain_score:49.8 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:5.3e-10 score:39.0 best_domain_score:22.0 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:3.6e-12 score:45.4 best_domain_score:25.8 name:Pyr_redox_2;
sp YES;
sprot_desc 4,4'-diaponeurosporene oxygenase;
sprot_id sp|Q2FDU3|CRTP_STAA3;
sprot_target db:uniprot_sprot|sp|Q2FDU3|CRTP_STAA3 12 500 evalue:2.5e-190 qcov:97.40 identity:65.30;
tigrfam_acc TIGR02734;
tigrfam_desc phytoene desaturase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name crtI_fam;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02734 evalue:2.7e-103 score:345.5 best_domain_score:345.3 name:TIGR02734;
tm_num 1;
17361 17447 signal_peptide
ID metaerg.pl|12404
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
18869 17361 transmembrane_helix
ID metaerg.pl|12405
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology i17394-17447o;
19779 18895 CDS
ID metaerg.pl|12406
allec_ids 2.5.1.96;
allgo_ids GO:0004310; GO:0046872; GO:0051996; GO:0016117; GO:0006696; GO:0009405;
allko_ids K10208;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192382.1 1 291 evalue:8.5e-123 qcov:99.00 identity:75.30;
kegg_pathway_id 00906;
kegg_pathway_name Carotenoid biosynthesis - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00494;
pfam_desc Squalene/phytoene synthase;
pfam_id SQS_PSY;
pfam_target db:Pfam-A.hmm|PF00494.19 evalue:8.7e-68 score:227.9 best_domain_score:227.7 name:SQS_PSY;
sprot_desc 4,4'-diapophytoene synthase;
sprot_id sp|Q4L976|CRTM_STAHJ;
sprot_target db:uniprot_sprot|sp|Q4L976|CRTM_STAHJ 9 291 evalue:1.8e-39 qcov:96.30 identity:33.30;
20233 20009 CDS
ID metaerg.pl|12407
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481609.1 1 74 evalue:7.6e-28 qcov:100.00 identity:85.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
21569 20382 CDS
ID metaerg.pl|12408
allgo_ids GO:0016021; GO:0055085;
allko_ids K08177; K03762; K02575; K08187; K08217; K08219;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192376.1 1 386 evalue:1.0e-163 qcov:97.70 identity:76.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:2.5e-36 score:124.5 best_domain_score:83.1 name:MFS_1;
tm_num 12;
21569 20382 transmembrane_helix
ID metaerg.pl|12409
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology i20415-20471o20514-20567i20604-20660o20670-20738i20772-20840o20868-20936i21015-21083o21120-21188i21207-21275o21288-21356i21390-21458o21468-21536i;
21713 22624 CDS
ID metaerg.pl|12410
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265707.1 1 303 evalue:4.1e-128 qcov:100.00 identity:83.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
tm_num 8;
21713 22624 transmembrane_helix
ID metaerg.pl|12411
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology o21722-21790i21824-21877o21890-21958i22019-22087o22217-22285i22385-22453o22463-22531i22550-22618o;
22699 23520 CDS
ID metaerg.pl|12412
allec_ids 1.-.-.-;
allgo_ids GO:0016491;
allko_ids K06221;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192374.1 1 273 evalue:2.7e-123 qcov:100.00 identity:76.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-4302; PWY-5271; PWY-2821; PWY-5826; PWY-5469; PWY-5479; PWY-5987; PWY-6113; PWYG-321;
metacyc_pathway_name aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00248;
pfam_desc Aldo/keto reductase family;
pfam_id Aldo_ket_red;
pfam_target db:Pfam-A.hmm|PF00248.21 evalue:6.5e-52 score:175.8 best_domain_score:172.6 name:Aldo_ket_red;
sprot_desc Uncharacterized oxidoreductase MSMEG_2408/MSMEI_2347;
sprot_id sp|A0QV10|Y2408_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QV10|Y2408_MYCS2 4 264 evalue:6.0e-61 qcov:95.60 identity:44.40;
25741 24836 CDS
ID metaerg.pl|12413
allgo_ids GO:0016020; GO:0030001; GO:0046873; GO:0055085;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium subtropicum;
genomedb_acc GCF_900112455.1;
genomedb_target db:genomedb|GCF_900112455.1|WP_091529137.1 1 301 evalue:5.7e-114 qcov:100.00 identity:68.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF01544;
pfam_desc CorA-like Mg2+ transporter protein;
pfam_id CorA;
pfam_target db:Pfam-A.hmm|PF01544.18 evalue:9.3e-29 score:99.9 best_domain_score:99.5 name:CorA;
tm_num 2;
25741 24836 transmembrane_helix
ID metaerg.pl|12414
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology i25574-25642o25652-25720i;
25863 26657 CDS
ID metaerg.pl|12415
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481623.1 31 264 evalue:2.4e-100 qcov:88.60 identity:71.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
tm_num 6;
25863 26657 transmembrane_helix
ID metaerg.pl|12416
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology o25935-25994i26013-26081o26139-26198i26259-26327o26340-26408i26442-26495o;
27378 26716 CDS
ID metaerg.pl|12417
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481624.1 3 220 evalue:6.9e-77 qcov:99.10 identity:61.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF12710; PF13419; PF00702; PF13344;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase;
pfam_id HAD; HAD_2; Hydrolase; Hydrolase_6;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:5e-11 score:42.6 best_domain_score:42.3 name:HAD; db:Pfam-A.hmm|PF13419.6 evalue:1.1e-21 score:77.0 best_domain_score:76.6 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:7.6e-14 score:51.7 best_domain_score:51.2 name:Hydrolase; db:Pfam-A.hmm|PF13344.6 evalue:4.7e-07 score:29.1 best_domain_score:24.5 name:Hydrolase_6;
tigrfam_acc TIGR01549;
tigrfam_desc HAD hydrolase, family IA, variant 1;
tigrfam_mainrole Unknown function;
tigrfam_name HAD-SF-IA-v1;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01549 evalue:3.6e-08 score:33.1 best_domain_score:25.3 name:TIGR01549;
27842 27378 CDS
ID metaerg.pl|12418
allec_ids 2.5.1.78;
allgo_ids GO:0009231; GO:0009349; GO:0000906;
allko_ids K00794;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192362.1 1 153 evalue:2.2e-69 qcov:99.40 identity:88.90;
kegg_pathway_id 00740;
kegg_pathway_name Riboflavin metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-6168; RIBOSYN2-PWY; PWY-6167;
metacyc_pathway_name flavin biosynthesis III (fungi);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis II (archaea);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00885;
pfam_desc 6,7-dimethyl-8-ribityllumazine synthase;
pfam_id DMRL_synthase;
pfam_target db:Pfam-A.hmm|PF00885.19 evalue:5.6e-57 score:190.8 best_domain_score:190.6 name:DMRL_synthase;
sprot_desc 6,7-dimethyl-8-ribityllumazine synthase;
sprot_id sp|A4IQG7|RISB_GEOTN;
sprot_target db:uniprot_sprot|sp|A4IQG7|RISB_GEOTN 1 153 evalue:6.0e-58 qcov:99.40 identity:74.50;
tigrfam_acc TIGR00114;
tigrfam_desc 6,7-dimethyl-8-ribityllumazine synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name lumazine-synth;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00114 evalue:7.3e-56 score:187.2 best_domain_score:187.0 name:TIGR00114;
29082 27889 CDS
ID metaerg.pl|12419
allec_ids 4.1.99.12; 3.5.4.25;
allgo_ids GO:0008686; GO:0009231; GO:0005525; GO:0003935; GO:0000287; GO:0030145; GO:0008270;
allko_ids K14652;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481630.1 1 397 evalue:1.2e-207 qcov:100.00 identity:88.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-6167; RIBOSYN2-PWY; PWY-6168;
metacyc_pathway_name flavin biosynthesis II (archaea);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis III (fungi);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00926; PF00925;
pfam_desc 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II;
pfam_id DHBP_synthase; GTP_cyclohydro2;
pfam_target db:Pfam-A.hmm|PF00926.19 evalue:4.9e-84 score:279.9 best_domain_score:279.5 name:DHBP_synthase; db:Pfam-A.hmm|PF00925.20 evalue:2.2e-68 score:228.2 best_domain_score:227.2 name:GTP_cyclohydro2;
sprot_desc Riboflavin biosynthesis protein RibBA;
sprot_id sp|A0Q3H7|RIBBA_CLONN;
sprot_target db:uniprot_sprot|sp|A0Q3H7|RIBBA_CLONN 2 397 evalue:9.5e-132 qcov:99.70 identity:58.30;
tigrfam_acc TIGR00505; TIGR00506;
tigrfam_desc GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone-4-phosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribA; ribB;
tigrfam_sub1role Riboflavin, FMN, and FAD; Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00505 evalue:4e-78 score:260.5 best_domain_score:259.8 name:TIGR00505; db:TIGRFAMs.hmm|TIGR00506 evalue:1.3e-77 score:259.1 best_domain_score:258.7 name:TIGR00506;
29747 29097 CDS
ID metaerg.pl|12420
allec_ids 2.5.1.9;
allgo_ids GO:0004746; GO:0009231;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034301611.1 1 215 evalue:7.5e-92 qcov:99.50 identity:81.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-6167; RIBOSYN2-PWY; PWY-6168;
metacyc_pathway_name flavin biosynthesis II (archaea);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis III (fungi);;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;;
pfam_acc PF00677;
pfam_desc Lumazine binding domain;
pfam_id Lum_binding;
pfam_target db:Pfam-A.hmm|PF00677.17 evalue:2.3e-50 score:167.7 best_domain_score:90.9 name:Lum_binding;
sprot_desc Riboflavin synthase;
sprot_id sp|P50854|RISA_ACTPL;
sprot_target db:uniprot_sprot|sp|P50854|RISA_ACTPL 1 215 evalue:7.1e-57 qcov:99.50 identity:54.40;
tigrfam_acc TIGR00187;
tigrfam_desc riboflavin synthase, alpha subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribE;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00187 evalue:2.7e-72 score:241.4 best_domain_score:241.2 name:TIGR00187;
30851 29751 CDS
ID metaerg.pl|12421
allec_ids 3.5.4.26; 1.1.1.193; 3.5.4.-;
allgo_ids GO:0002100; GO:0008251; GO:0008703; GO:0008835; GO:0050661; GO:0008270; GO:0009231;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium subtropicum;
genomedb_acc GCF_900112455.1;
genomedb_target db:genomedb|GCF_900112455.1|WP_091529146.1 4 362 evalue:1.6e-139 qcov:98.10 identity:69.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-6168; RIBOSYN2-PWY; PWY-6167; PWY-5354; PWY-5209;
metacyc_pathway_name flavin biosynthesis III (fungi);; flavin biosynthesis I (bacteria and plants);; flavin biosynthesis II (archaea);; ; methyl-coenzyme M oxidation to CO2;;
metacyc_pathway_type Flavin-Biosynthesis;; Flavin-Biosynthesis;; Flavin-Biosynthesis;; ; METHANOGENESIS;;
pfam_acc PF00383; PF18785; PF14437; PF01872;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; Invertebrate-AID/APOBEC-deaminase; MafB19-like deaminase; RibD C-terminal domain;
pfam_id dCMP_cyt_deam_1; Inv-AAD; MafB19-deam; RibD_C;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:5.9e-25 score:86.3 best_domain_score:85.6 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF18785.1 evalue:2e-06 score:26.9 best_domain_score:22.5 name:Inv-AAD; db:Pfam-A.hmm|PF14437.6 evalue:4.7e-15 score:54.8 best_domain_score:53.5 name:MafB19-deam; db:Pfam-A.hmm|PF01872.17 evalue:7e-54 score:181.9 best_domain_score:181.5 name:RibD_C;
sprot_desc Riboflavin biosynthesis protein RibD;
sprot_id sp|P50853|RIBD_ACTPL;
sprot_target db:uniprot_sprot|sp|P50853|RIBD_ACTPL 3 362 evalue:3.5e-96 qcov:98.40 identity:49.40;
tigrfam_acc TIGR00227; TIGR00326;
tigrfam_desc riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ribD_Cterm; eubact_ribD;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00227 evalue:6.3e-72 score:240.8 best_domain_score:239.6 name:TIGR00227; db:TIGRFAMs.hmm|TIGR00326 evalue:3.8e-117 score:390.5 best_domain_score:390.3 name:TIGR00326;
32097 31276 CDS
ID metaerg.pl|12422
allgo_ids GO:0005886; GO:0006865;
allko_ids K02073;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192348.1 1 273 evalue:3.9e-130 qcov:100.00 identity:85.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF03180;
pfam_desc NLPA lipoprotein;
pfam_id Lipoprotein_9;
pfam_target db:Pfam-A.hmm|PF03180.14 evalue:4.1e-75 score:251.2 best_domain_score:251.0 name:Lipoprotein_9;
sp YES;
sprot_desc Methionine-binding lipoprotein MetQ;
sprot_id sp|O32167|METQ_BACSU;
sprot_target db:uniprot_sprot|sp|O32167|METQ_BACSU 2 273 evalue:2.5e-59 qcov:99.60 identity:44.50;
31276 31329 lipoprotein_signal_peptide
ID metaerg.pl|12423
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
32850 32149 CDS
ID metaerg.pl|12424
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0048473;
allko_ids K02042; K02072;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192346.1 5 233 evalue:1.8e-104 qcov:98.30 identity:91.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:6.9e-24 score:83.8 best_domain_score:83.8 name:BPD_transp_1;
sprot_desc Methionine import system permease protein MetP;
sprot_id sp|O32168|METP_BACSU;
sprot_target db:uniprot_sprot|sp|O32168|METP_BACSU 17 233 evalue:1.2e-49 qcov:93.10 identity:52.50;
tm_num 5;
32850 32149 transmembrane_helix
ID metaerg.pl|12425
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology o32245-32313i32374-32442o32452-32520i32632-32700o32758-32817i;
33874 32843 CDS
ID metaerg.pl|12426
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015424;
allko_ids K02029; K11962; K02000; K10021; K09812; K10243; K01990; K10000; K02018; K02023; K10038; K10025; K02013; K06857; K05816; K10235; K11076; K02049; K02065; K01995; K10562; K01998; K10111; K10112; K02031; K10041; K11072; K02068; K02045; K02028; K10821; K01996; K02071; K06861; K10199; K10441; K11084; K02017; K10017; K02032; K05847; K02056; K02010; K02003; K01997; K02004; K02052; K02006;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481641.1 1 341 evalue:2.1e-157 qcov:99.40 identity:82.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6135; PWY-6171; PWY-6188; PWY-6166;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF13304; PF00005; PF09383;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; NIL domain;
pfam_id AAA_21; ABC_tran; NIL;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:4e-07 score:29.4 best_domain_score:15.1 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:8.2e-38 score:129.3 best_domain_score:128.2 name:ABC_tran; db:Pfam-A.hmm|PF09383.10 evalue:5.5e-18 score:63.8 best_domain_score:62.8 name:NIL;
sprot_desc Methionine import ATP-binding protein MetN;
sprot_id sp|Q5KVK2|METN_GEOKA;
sprot_target db:uniprot_sprot|sp|Q5KVK2|METN_GEOKA 1 342 evalue:9.1e-107 qcov:99.70 identity:59.60;
35583 34396 CDS
ID metaerg.pl|12427
allec_ids 2.7.2.1;
allgo_ids GO:0005622; GO:0016301; GO:0016310; GO:0016774; GO:0005737; GO:0008776; GO:0005524; GO:0000287; GO:0006085; GO:0006082;
allko_ids K00925;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091478938.1 1 394 evalue:2.1e-172 qcov:99.70 identity:76.60;
kegg_pathway_id 00620; 00640; 00430;
kegg_pathway_name Pyruvate metabolism; Propanoate metabolism; Taurine and hypotaurine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-5600; P142-PWY; PWY-5100; PWY-5676; PWY-5485; P41-PWY; P161-PWY; P3-PWY; PWY0-1312; P124-PWY; PWY-5327; PROPFERM-PWY; FERMENTATION-PWY; METH-ACETATE-PWY; P461-PWY; ACETATEUTIL-PWY; PWY-5497; PWY-5482; P164-PWY; P441-PWY;
metacyc_pathway_name pyruvate fermentation to acetate VII;; pyruvate fermentation to acetate I;; pyruvate fermentation to acetate and lactate II;; acetyl-CoA fermentation to butanoate II;; pyruvate fermentation to acetate IV;; pyruvate fermentation to acetate and (S)-lactate I;; acetylene degradation (anaerobic);; gallate degradation III (anaerobic);; acetate and ATP formation from acetyl-CoA I;; Bifidobacterium shunt;; superpathway of L-lysine degradation;; L-alanine fermentation to propanoate and acetate;; mixed acid fermentation;; methanogenesis from acetate;; hexitol fermentation to lactate, formate, ethanol and acetate;; superpathway of acetate utilization and formation;; purine nucleobases degradation II (anaerobic);; pyruvate fermentation to acetate II;; purine nucleobases degradation I (anaerobic);; superpathway of N-acetylneuraminate degradation;;
metacyc_pathway_type Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Acetyl-CoA-Butyrate; Super-Pathways;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; Acetate-Formation; Pyruvate-Ethanol-Fermentation;; GALLATE-DEG;; Acetate-Formation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; LYSINE-DEG; Super-Pathways;; Acetate-Formation; Fermentation-to-propanoate; Super-Pathways;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; METHANOGENESIS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; Fermentation; Purine-Degradation;; Pyruvate-Acetate-Fermentation;; Fermentation; Purine-Degradation;; CARBOXYLATES-DEG; Super-Pathways;;
pfam_acc PF00871;
pfam_desc Acetokinase family;
pfam_id Acetate_kinase;
pfam_target db:Pfam-A.hmm|PF00871.17 evalue:3.3e-150 score:499.4 best_domain_score:499.2 name:Acetate_kinase;
sprot_desc Acetate kinase;
sprot_id sp|Q833H0|ACKA_ENTFA;
sprot_target db:uniprot_sprot|sp|Q833H0|ACKA_ENTFA 1 394 evalue:6.7e-154 qcov:99.70 identity:67.80;
tigrfam_acc TIGR00016;
tigrfam_desc acetate kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name ackA;
tigrfam_sub1role Fermentation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00016 evalue:5.9e-155 score:515.1 best_domain_score:515.0 name:TIGR00016;
36841 36209 CDS
ID metaerg.pl|12428
allgo_ids GO:0005507; GO:0055070; GO:0005737; GO:0006878;
allko_ids K06201;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481644.1 1 210 evalue:6.6e-77 qcov:100.00 identity:64.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF03932;
pfam_desc CutC family;
pfam_id CutC;
pfam_target db:Pfam-A.hmm|PF03932.14 evalue:7.5e-56 score:188.0 best_domain_score:187.9 name:CutC;
sprot_desc Copper homeostasis protein CutC;
sprot_id sp|Q830V2|CUTC_ENTFA;
sprot_target db:uniprot_sprot|sp|Q830V2|CUTC_ENTFA 1 208 evalue:3.2e-46 qcov:99.00 identity:45.50;
38205 36844 CDS
ID metaerg.pl|12429
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0022857;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192338.1 1 453 evalue:6.3e-218 qcov:100.00 identity:85.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00324; PF13520;
pfam_desc Amino acid permease; Amino acid permease;
pfam_id AA_permease; AA_permease_2;
pfam_target db:Pfam-A.hmm|PF00324.21 evalue:2.5e-20 score:71.8 best_domain_score:71.8 name:AA_permease; db:Pfam-A.hmm|PF13520.6 evalue:3.8e-37 score:127.3 best_domain_score:126.9 name:AA_permease_2;
sprot_desc hypothetical protein;
sprot_id sp|P75472|Y308_MYCPN;
sprot_target db:uniprot_sprot|sp|P75472|Y308_MYCPN 1 344 evalue:9.5e-11 qcov:75.90 identity:22.60;
tm_num 12;
38205 36844 transmembrane_helix
ID metaerg.pl|12430
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology i36862-36921o36964-37032i37132-37200o37228-37281i37300-37368o37426-37485i37546-37614o37690-37758i37831-37899o37942-37995i38029-38097o38107-38175i;
39004 38417 CDS
ID metaerg.pl|12431
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192336.1 1 193 evalue:5.4e-41 qcov:99.00 identity:45.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00583; PF13673; PF13508;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:2.7e-13 score:49.4 best_domain_score:48.4 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:1.3e-07 score:30.8 best_domain_score:28.5 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:2.8e-08 score:33.3 best_domain_score:30.9 name:Acetyltransf_7;
39125 39763 CDS
ID metaerg.pl|12432
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192333.1 1 207 evalue:4.0e-66 qcov:97.60 identity:58.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00583; PF13673; PF13527;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_9;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:3.5e-08 score:32.9 best_domain_score:31.5 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:5.9e-08 score:31.9 best_domain_score:26.2 name:Acetyltransf_10; db:Pfam-A.hmm|PF13527.7 evalue:8.4e-07 score:28.4 best_domain_score:19.1 name:Acetyltransf_9;
41280 39847 CDS
ID metaerg.pl|12433
allgo_ids GO:0015501; GO:0015813; GO:0016021;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481655.1 1 470 evalue:6.2e-240 qcov:98.50 identity:91.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF03616;
pfam_desc Sodium/glutamate symporter;
pfam_id Glt_symporter;
pfam_target db:Pfam-A.hmm|PF03616.14 evalue:2.2e-15 score:55.4 best_domain_score:45.4 name:Glt_symporter;
tm_num 11;
41280 39847 transmembrane_helix
ID metaerg.pl|12434
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology o39859-39927i39946-40014o40072-40140i40201-40269o40384-40452i40585-40653o40681-40749i40810-40878o40888-40956i41104-41163o41176-41235i;
42487 41495 CDS
ID metaerg.pl|12435
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_051503784.1 1 329 evalue:2.0e-168 qcov:99.70 identity:86.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF12850;
pfam_desc Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos_2;
pfam_target db:Pfam-A.hmm|PF12850.7 evalue:4.9e-07 score:29.3 best_domain_score:28.6 name:Metallophos_2;
42645 43481 CDS
ID metaerg.pl|12436
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481657.1 1 275 evalue:7.1e-79 qcov:98.90 identity:56.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
43484 43915 CDS
ID metaerg.pl|12437
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192326.1 1 142 evalue:1.1e-43 qcov:99.30 identity:57.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
44734 44015 CDS
ID metaerg.pl|12438
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034301646.1 1 239 evalue:3.6e-87 qcov:100.00 identity:66.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00571;
pfam_desc CBS domain;
pfam_id CBS;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:1.2e-10 score:40.9 best_domain_score:22.8 name:CBS;
45230 44865 CDS
ID metaerg.pl|12439
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091489127.1 1 120 evalue:1.8e-39 qcov:99.20 identity:70.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
45736 45290 CDS
ID metaerg.pl|12440
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265757.1 1 148 evalue:4.7e-69 qcov:100.00 identity:87.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
46106 45846 CDS
ID metaerg.pl|12441
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192318.1 3 86 evalue:3.2e-14 qcov:97.70 identity:51.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
tm_num 2;
46106 45846 transmembrane_helix
ID metaerg.pl|12442
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology i45864-45932o46020-46088i;
46800 46237 CDS
ID metaerg.pl|12443
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192316.1 1 187 evalue:3.0e-89 qcov:100.00 identity:84.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF02525; PF03358;
pfam_desc Flavodoxin-like fold; NADPH-dependent FMN reductase;
pfam_id Flavodoxin_2; FMN_red;
pfam_target db:Pfam-A.hmm|PF02525.17 evalue:1.4e-07 score:30.6 best_domain_score:30.2 name:Flavodoxin_2; db:Pfam-A.hmm|PF03358.15 evalue:5.2e-31 score:106.7 best_domain_score:106.3 name:FMN_red;
46977 47543 CDS
ID metaerg.pl|12444
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192314.1 1 184 evalue:1.7e-47 qcov:97.90 identity:54.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00440;
pfam_desc Bacterial regulatory proteins, tetR family;
pfam_id TetR_N;
pfam_target db:Pfam-A.hmm|PF00440.23 evalue:3.6e-07 score:29.1 best_domain_score:28.5 name:TetR_N;
48539 47817 CDS
ID metaerg.pl|12445
allec_ids 1.10.3.-;
allgo_ids GO:0005507; GO:0016682; GO:0042803;
allko_ids K05810;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192312.1 1 239 evalue:3.8e-89 qcov:99.60 identity:66.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-5404; PWY-5476; PWY-5439; PWY-5787; PWY-5466; PWY-5405;
metacyc_pathway_name betaxanthin biosynthesis (via dopaxanthin);; cornusiin E biosynthesis;; betacyanin biosynthesis (via dopamine);; oligomeric urushiol biosynthesis;; matairesinol biosynthesis;; superpathway of betalain biosynthesis;;
metacyc_pathway_type BETALAIN-ALKALOIDS;; ELLAGITANNINS;; BETALAIN-ALKALOIDS;; AROMATIC-COMPOUNDS-BIOSYN;; LIGNAN-SYN;; BETALAIN-ALKALOIDS; Super-Pathways;;
pfam_acc PF02578;
pfam_desc Multi-copper polyphenol oxidoreductase laccase;
pfam_id Cu-oxidase_4;
pfam_target db:Pfam-A.hmm|PF02578.15 evalue:3.6e-47 score:160.1 best_domain_score:159.9 name:Cu-oxidase_4;
sprot_desc Polyphenol oxidase;
sprot_id sp|Q89ZI8|POLOX_BACTN;
sprot_target db:uniprot_sprot|sp|Q89ZI8|POLOX_BACTN 29 215 evalue:5.7e-23 qcov:77.90 identity:32.10;
tigrfam_acc TIGR00726;
tigrfam_desc YfiH family protein;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00726;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00726 evalue:6.1e-47 score:159.0 best_domain_score:158.7 name:TIGR00726;
49773 48670 CDS
ID metaerg.pl|12446
allec_ids 1.4.1.9;
allgo_ids GO:0051287; GO:0055114; GO:0050049; GO:0006552;
allko_ids K00270; K00263;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481676.1 1 367 evalue:1.6e-174 qcov:100.00 identity:82.30;
kegg_pathway_id 00280; 00290; 00400; 00360;
kegg_pathway_name Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Phenylalanine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF02826; PF00208; PF02812;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain;
pfam_id 2-Hacid_dh_C; ELFV_dehydrog; ELFV_dehydrog_N;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:1.5e-06 score:26.9 best_domain_score:26.2 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF00208.21 evalue:2.2e-14 score:53.0 best_domain_score:31.8 name:ELFV_dehydrog; db:Pfam-A.hmm|PF02812.18 evalue:1.6e-23 score:82.2 best_domain_score:81.0 name:ELFV_dehydrog_N;
sprot_desc Leucine dehydrogenase;
sprot_id sp|P54531|DHLE_BACSU;
sprot_target db:uniprot_sprot|sp|P54531|DHLE_BACSU 1 367 evalue:8.2e-122 qcov:100.00 identity:61.70;
49940 50827 CDS
ID metaerg.pl|12447
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481679.1 1 295 evalue:8.8e-144 qcov:100.00 identity:88.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:2.8e-17 score:61.6 best_domain_score:60.1 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:2.4e-18 score:65.5 best_domain_score:65.2 name:LysR_substrate;
52239 50869 CDS
ID metaerg.pl|12448
allec_ids 2.3.1.168;
allgo_ids GO:0016746; GO:0043754; GO:0006096;
allko_ids K09699; K11381; K00658; K00163; K00162; K00382;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192305.1 1 456 evalue:6.0e-192 qcov:100.00 identity:78.40;
kegg_pathway_id 00260; 00020; 00280; 00010; 00310; 00290; 00650; 00252; 00620;
kegg_pathway_name Glycine, serine and threonine metabolism; Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine biosynthesis; Butanoate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-5046;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF00198; PF00364; PF02817;
pfam_desc 2-oxoacid dehydrogenases acyltransferase (catalytic domain); Biotin-requiring enzyme; e3 binding domain;
pfam_id 2-oxoacid_dh; Biotin_lipoyl; E3_binding;
pfam_target db:Pfam-A.hmm|PF00198.23 evalue:2.2e-77 score:258.9 best_domain_score:258.0 name:2-oxoacid_dh; db:Pfam-A.hmm|PF00364.22 evalue:5.5e-18 score:63.8 best_domain_score:62.9 name:Biotin_lipoyl; db:Pfam-A.hmm|PF02817.17 evalue:5.8e-14 score:51.4 best_domain_score:50.2 name:E3_binding;
sprot_desc Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex;
sprot_id sp|P37942|ODB2_BACSU;
sprot_target db:uniprot_sprot|sp|P37942|ODB2_BACSU 1 456 evalue:1.9e-96 qcov:100.00 identity:44.60;
53239 52253 CDS
ID metaerg.pl|12449
allec_ids 1.2.4.4;
allgo_ids GO:0003863; GO:0003826; GO:0009083; GO:0007584;
allko_ids K11381; K00161; K00167; K00615; K00162;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192303.1 1 328 evalue:6.7e-177 qcov:100.00 identity:96.60;
kegg_pathway_id 00710; 00010; 00030; 00280; 00290; 00020; 00620; 00252; 01051; 00650;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Pentose phosphate pathway; Valine, leucine and isoleucine degradation; Valine, leucine and isoleucine biosynthesis; Citrate cycle (TCA cycle); Pyruvate metabolism; Alanine and aspartate metabolism; Biosynthesis of ansamycins; Butanoate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-5046;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF02780; PF02779;
pfam_desc Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain;
pfam_id Transketolase_C; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF02780.20 evalue:1.3e-39 score:134.1 best_domain_score:133.4 name:Transketolase_C; db:Pfam-A.hmm|PF02779.24 evalue:2.1e-40 score:137.5 best_domain_score:135.6 name:Transket_pyr;
sprot_desc 2-oxoisovalerate dehydrogenase subunit beta;
sprot_id sp|P37941|ODBB_BACSU;
sprot_target db:uniprot_sprot|sp|P37941|ODBB_BACSU 1 328 evalue:3.0e-115 qcov:100.00 identity:61.60;
54253 53267 CDS
ID metaerg.pl|12450
allec_ids 1.2.4.4;
allgo_ids GO:0008661; GO:0016114; GO:0003863; GO:0003826; GO:0046872; GO:0009083;
allko_ids K00162; K00167; K00161; K00166; K11381;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265835.1 1 328 evalue:2.0e-173 qcov:100.00 identity:91.80;
kegg_pathway_id 00650; 00020; 00280; 00010; 00252; 00290; 00620;
kegg_pathway_name Butanoate metabolism; Citrate cycle (TCA cycle); Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Alanine and aspartate metabolism; Valine, leucine and isoleucine biosynthesis; Pyruvate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-5046;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;;
metacyc_pathway_type Respiration;;
pfam_acc PF13292; PF00676; PF02775; PF00456;
pfam_desc 1-deoxy-D-xylulose-5-phosphate synthase; Dehydrogenase E1 component; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Transketolase, thiamine diphosphate binding domain;
pfam_id DXP_synthase_N; E1_dh; TPP_enzyme_C; Transketolase_N;
pfam_target db:Pfam-A.hmm|PF13292.6 evalue:2.3e-07 score:29.5 best_domain_score:28.2 name:DXP_synthase_N; db:Pfam-A.hmm|PF00676.20 evalue:6.1e-84 score:280.7 best_domain_score:280.5 name:E1_dh; db:Pfam-A.hmm|PF02775.21 evalue:7.2e-06 score:25.1 best_domain_score:23.0 name:TPP_enzyme_C; db:Pfam-A.hmm|PF00456.21 evalue:2.5e-05 score:22.6 best_domain_score:22.1 name:Transketolase_N;
sprot_desc 2-oxoisovalerate dehydrogenase subunit alpha;
sprot_id sp|P37940|ODBA_BACSU;
sprot_target db:uniprot_sprot|sp|P37940|ODBA_BACSU 8 327 evalue:3.7e-81 qcov:97.60 identity:49.20;
55688 54273 CDS
ID metaerg.pl|12451
allec_ids 1.8.1.4;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0005737; GO:0004148; GO:0009055; GO:0050660; GO:0045454; GO:0006096;
allko_ids K00382; K00362; K00266; K01008; K00529; K00356; K03885; K00384; K00658; K00383; K03388; K00176;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091481690.1 1 471 evalue:4.8e-237 qcov:100.00 identity:89.40;
kegg_pathway_id 00240; 00720; 00480; 00790; 00620; 00450; 00020; 00260; 00010; 00310; 00280; 00071; 00360; 00190; 00252; 00251; 00910;
kegg_pathway_name Pyrimidine metabolism; Reductive carboxylate cycle (CO2 fixation); Glutathione metabolism; Folate biosynthesis; Pyruvate metabolism; Selenoamino acid metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine degradation; Fatty acid metabolism; Phenylalanine metabolism; Oxidative phosphorylation; Alanine and aspartate metabolism; Glutamate metabolism; Nitrogen metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-5046; GLYCLEAV-PWY; PYRUVDEHYD-PWY; PWY-5173; PWY-5084; PWY-5464;
metacyc_pathway_name 2-oxoisovalerate decarboxylation to isobutanoyl-CoA;; glycine cleavage;; pyruvate decarboxylation to acetyl CoA;; superpathway of acetyl-CoA biosynthesis;; 2-oxoglutarate decarboxylation to succinyl-CoA;; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;;
metacyc_pathway_type Respiration;; GLYCINE-DEG;; Acetyl-CoA-Biosynthesis; CARBOXYLATES-DEG;; Acetyl-CoA-Biosynthesis; Super-Pathways;; Respiration;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF02737; PF01262; PF00890; PF01494; PF12831; PF01134; PF03486; PF13450; PF00070; PF07992; PF13738; PF02852;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Alanine dehydrogenase/PNT, C-terminal domain; FAD binding domain; FAD binding domain; FAD dependent oxidoreductase; Glucose inhibited division protein A; HI0933-like protein; NAD(P)-binding Rossmann-like domain; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain;
pfam_id 3HCDH_N; AlaDh_PNT_C; FAD_binding_2; FAD_binding_3; FAD_oxidored; GIDA; HI0933_like; NAD_binding_8; Pyr_redox; Pyr_redox_2; Pyr_redox_3; Pyr_redox_dim;
pfam_target db:Pfam-A.hmm|PF02737.18 evalue:3.1e-05 score:23.2 best_domain_score:21.8 name:3HCDH_N; db:Pfam-A.hmm|PF01262.21 evalue:1.3e-06 score:27.1 best_domain_score:16.3 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF00890.24 evalue:6.8e-06 score:24.6 best_domain_score:22.1 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:1.6e-05 score:23.5 best_domain_score:12.1 name:FAD_binding_3; db:Pfam-A.hmm|PF12831.7 evalue:1.6e-07 score:30.3 best_domain_score:29.7 name:FAD_oxidored; db:Pfam-A.hmm|PF01134.22 evalue:3.4e-12 score:45.4 best_domain_score:36.8 name:GIDA; db:Pfam-A.hmm|PF03486.14 evalue:4.6e-06 score:24.8 best_domain_score:14.8 name:HI0933_like; db:Pfam-A.hmm|PF13450.6 evalue:4.3e-08 score:32.5 best_domain_score:19.3 name:NAD_binding_8; db:Pfam-A.hmm|PF00070.27 evalue:3e-15 score:55.8 best_domain_score:53.1 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.4e-61 score:207.5 best_domain_score:207.2 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:4.8e-10 score:38.4 best_domain_score:35.6 name:Pyr_redox_3; db:Pfam-A.hmm|PF02852.22 evalue:1.1e-31 score:108.6 best_domain_score:105.9 name:Pyr_redox_dim;
sprot_desc Dihydrolipoyl dehydrogenase;
sprot_id sp|P54533|DLDH2_BACSU;
sprot_target db:uniprot_sprot|sp|P54533|DLDH2_BACSU 1 470 evalue:6.4e-127 qcov:99.80 identity:51.40;
tigrfam_acc TIGR01350;
tigrfam_desc dihydrolipoyl dehydrogenase;
tigrfam_name lipoamide_DH;
tigrfam_target db:TIGRFAMs.hmm|TIGR01350 evalue:1.2e-157 score:524.5 best_domain_score:524.3 name:TIGR01350;
56777 55710 CDS
ID metaerg.pl|12452
allec_ids 2.7.2.7;
allgo_ids GO:0005622; GO:0016301; GO:0016310; GO:0016774; GO:0005737; GO:0005524; GO:0047761;
allko_ids K00929;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192295.1 1 355 evalue:5.1e-154 qcov:100.00 identity:78.90;
kegg_pathway_id 00650;
kegg_pathway_name Butanoate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id CENTFERM-PWY; GLUDEG-II-PWY;
metacyc_pathway_name pyruvate fermentation to butanoate;; L-glutamate degradation VII (to butanoate);;
metacyc_pathway_type Acetyl-CoA-Butyrate; Pyruvate-Degradation;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;;
pfam_acc PF00871;
pfam_desc Acetokinase family;
pfam_id Acetate_kinase;
pfam_target db:Pfam-A.hmm|PF00871.17 evalue:1.6e-63 score:213.9 best_domain_score:213.6 name:Acetate_kinase;
sprot_desc Probable butyrate kinase;
sprot_id sp|Q9RPS7|BUK_ENTFA;
sprot_target db:uniprot_sprot|sp|Q9RPS7|BUK_ENTFA 3 355 evalue:5.9e-117 qcov:99.40 identity:60.10;
tigrfam_acc TIGR02707;
tigrfam_desc butyrate kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name butyr_kinase;
tigrfam_sub1role Fermentation;
tigrfam_target db:TIGRFAMs.hmm|TIGR02707 evalue:5.2e-154 score:511.6 best_domain_score:511.4 name:TIGR02707;
57634 56798 CDS
ID metaerg.pl|12453
allec_ids 2.3.1.19;
allgo_ids GO:0016746; GO:0050182; GO:0019605;
allko_ids K00634;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192293.1 1 274 evalue:1.2e-113 qcov:98.60 identity:79.60;
kegg_pathway_id 00650;
kegg_pathway_name Butanoate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id GLUDEG-II-PWY; CENTFERM-PWY;
metacyc_pathway_name L-glutamate degradation VII (to butanoate);; pyruvate fermentation to butanoate;;
metacyc_pathway_type Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;;
pfam_acc PF01515;
pfam_desc Phosphate acetyl/butaryl transferase;
pfam_id PTA_PTB;
pfam_target db:Pfam-A.hmm|PF01515.19 evalue:1.1e-40 score:139.1 best_domain_score:138.8 name:PTA_PTB;
sprot_desc Probable phosphate butyryltransferase;
sprot_id sp|P54530|PTB_BACSU;
sprot_target db:uniprot_sprot|sp|P54530|PTB_BACSU 2 271 evalue:3.3e-46 qcov:97.10 identity:37.40;
58154 58230 tRNA
ID metaerg.pl|12454
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
name tRNA_Glu_ttc;
58266 59423 CDS
ID metaerg.pl|12455
allgo_ids GO:0016021; GO:0005886; GO:0005328;
allko_ids K03308;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192290.1 1 384 evalue:1.1e-170 qcov:99.70 identity:82.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00209;
pfam_desc Sodium:neurotransmitter symporter family;
pfam_id SNF;
pfam_target db:Pfam-A.hmm|PF00209.18 evalue:8.8e-34 score:116.3 best_domain_score:104.7 name:SNF;
sprot_desc Uncharacterized sodium-dependent transporter YhdH;
sprot_id sp|O07577|YHDH_BACSU;
sprot_target db:uniprot_sprot|sp|O07577|YHDH_BACSU 4 378 evalue:6.3e-64 qcov:97.40 identity:40.50;
tm_num 9;
58266 59423 transmembrane_helix
ID metaerg.pl|12456
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology i58347-58415o58515-58574i58611-58679o58737-58805i58839-58907o58980-59048i59109-59177o59220-59288i59349-59417o;
60773 59796 CDS
ID metaerg.pl|12457
allec_ids 1.13.11.-;
allgo_ids GO:0005737; GO:0051213; GO:0046872; GO:0019439; GO:0009636;
allko_ids K00465; K15975;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192288.1 1 325 evalue:6.0e-154 qcov:100.00 identity:80.00;
kegg_pathway_id 00626; 00362; 00590; 00351; 00623; 00643;
kegg_pathway_name Naphthalene and anthracene degradation; Benzoate degradation via hydroxylation; Arachidonic acid metabolism; 1,1,1-Trichloro-2,2-bis(4-chlorophenyl)ethane (DDT) degradation; 2,4-Dichlorobenzoate degradation; Styrene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-2501; PWY-5406; PWY-6550; PWY-5407; PWY-5405; PWY-5163; P662-PWY; 2ASDEG-PWY; PWY-5408; P661-PWY;
metacyc_pathway_name fatty acid α-oxidation I;; divinyl ether biosynthesis I;; carbazole degradation;; 9-lipoxygenase and 9-allene oxide synthase pathway;; superpathway of betalain biosynthesis;; p-cumate degradation to 2-hydroxypentadienoate;; dibenzofuran degradation;; orthanilate degradation;; 9-lipoxygenase and 9-hydroperoxide lyase pathway;; dibenzo-p-dioxin degradation;;
metacyc_pathway_type Fatty-Acid-Degradation;; Divinyl-Ether-Biosynthesis; Metabolic-Clusters;; AROMATIC-COMPOUNDS-DEGRADATION;; FATTY-ACID-DERIVATIVE-SYN;; BETALAIN-ALKALOIDS; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION;; AROMATIC-COMPOUNDS-DEGRADATION;; AROMATIC-COMPOUNDS-DEGRADATION;; FATTY-ACID-DERIVATIVE-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;;
pfam_acc PF00903;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:1.2e-21 score:76.5 best_domain_score:39.6 name:Glyoxalase;
sprot_desc Putative ring-cleaving dioxygenase MhqA;
sprot_id sp|O34689|MHQA_BACSU;
sprot_target db:uniprot_sprot|sp|O34689|MHQA_BACSU 3 313 evalue:4.2e-69 qcov:95.70 identity:42.70;
61055 61915 CDS
ID metaerg.pl|12458
allgo_ids GO:0043565;
allko_ids K08884; K01768; K00012;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192286.1 1 285 evalue:2.3e-117 qcov:99.70 identity:76.50;
kegg_pathway_id 00230; 00040; 00500; 00520;
kegg_pathway_name Purine metabolism; Pentose and glucuronate interconversions; Starch and sucrose metabolism; Nucleotide sugars metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF12844; PF01381; PF13560; PF00515; PF13414; PF07719; PF13181;
pfam_desc Helix-turn-helix domain; Helix-turn-helix; Helix-turn-helix domain; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id HTH_19; HTH_3; HTH_31; TPR_1; TPR_11; TPR_2; TPR_8;
pfam_target db:Pfam-A.hmm|PF12844.7 evalue:1.3e-07 score:30.8 best_domain_score:29.3 name:HTH_19; db:Pfam-A.hmm|PF01381.22 evalue:1e-08 score:34.4 best_domain_score:33.0 name:HTH_3; db:Pfam-A.hmm|PF13560.6 evalue:2e-06 score:27.3 best_domain_score:26.6 name:HTH_31; db:Pfam-A.hmm|PF00515.28 evalue:1.8e-09 score:36.3 best_domain_score:22.7 name:TPR_1; db:Pfam-A.hmm|PF13414.6 evalue:1.2e-06 score:27.3 best_domain_score:17.8 name:TPR_11; db:Pfam-A.hmm|PF07719.17 evalue:1.3e-11 score:42.9 best_domain_score:21.5 name:TPR_2; db:Pfam-A.hmm|PF13181.6 evalue:1.1e-07 score:30.8 best_domain_score:16.2 name:TPR_8;
62271 62612 CDS
ID metaerg.pl|12459
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091265799.1 11 106 evalue:7.5e-19 qcov:85.00 identity:67.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
tm_num 1;
62271 62612 transmembrane_helix
ID metaerg.pl|12460
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology i62346-62414o;
62766 63251 CDS
ID metaerg.pl|12461
allec_ids 4.2.-.-; 3.6.1.-;
allgo_ids GO:0002161; GO:0016829; GO:0006412;
allko_ids K03976;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192281.1 1 158 evalue:1.8e-58 qcov:98.10 identity:69.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY0-1261; PWY-6147; PWY-5354; PWY-6383; FOLSYN-PWY; ALL-CHORISMATE-PWY; PWY-6502; PWY-6404;
metacyc_pathway_name anhydromuropeptides recycling I;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; ; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;; oxidized GTP and dGTP detoxification;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;;
metacyc_pathway_type Anhydromuropeptides-Recycling;; 6-HM-Dihydropterin-PP-Biosynthesis;; ; Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;; Detoxification; Metabolic-Clusters;; Cell-Wall-Biosynthesis; Super-Pathways;;
pfam_acc PF04073;
pfam_desc Aminoacyl-tRNA editing domain;
pfam_id tRNA_edit;
pfam_target db:Pfam-A.hmm|PF04073.15 evalue:1.6e-26 score:92.0 best_domain_score:91.6 name:tRNA_edit;
sprot_desc Putative Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YjdI;
sprot_id sp|O31650|YJDI_BACSU;
sprot_target db:uniprot_sprot|sp|O31650|YJDI_BACSU 3 157 evalue:2.7e-29 qcov:96.30 identity:43.90;
tigrfam_acc TIGR00011;
tigrfam_desc Cys-tRNA(Pro) deacylase;
tigrfam_mainrole Protein synthesis;
tigrfam_name YbaK_EbsC;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00011 evalue:2.3e-47 score:159.7 best_domain_score:159.6 name:TIGR00011;
63894 63343 CDS
ID metaerg.pl|12462
allec_ids 2.3.1.-;
allgo_ids GO:0005737; GO:0008080; GO:1990189; GO:0008999; GO:0017198;
allko_ids K03817;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192261.1 1 179 evalue:6.6e-57 qcov:97.80 identity:55.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-6432; PWY1A0-6325; LPSSYN-PWY; PWY-6113; PWY-6413; PWYG-321; FASYN-INITIAL-PWY; PWY-5477; PWY-5981; PWY-5437; SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-6310; PWY-5139; PWY-5080; PWY-6312; PWY-6442; PWY-6418; PWY1-3; PWY-6397; KDO-NAGLIPASYN-PWY; BENZCOA-PWY; PWY-5184; PWY-4801; PWY-5140; PWY-6411; PWY-5987; PWY-5268; PWY0-881; PWY-6316; CENTBENZCOA-PWY; PWY-6404; PWY-5313; ECASYN-PWY; PWY-6295; P3-PWY; PWY-6515; PWY-5284; PWY-6438; THREOCAT-PWY; PWY-84; KDO-LIPASYN-PWY; PWY-6412; PWY-5393; PWY-5307; PWY-6318; PWY-5405; PWY-5972; PWY-5400; PWY-5965; PWY-5209;
metacyc_pathway_name curcuminoid biosynthesis;; actinorhodin biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; superpathway of mycolate biosynthesis;; ginsenoside degradation III;; mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; gallotannin biosynthesis;; CDP-diacylglycerol biosynthesis III;; L-threonine degradation I;; sophorolipid biosynthesis;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; very long chain fatty acid biosynthesis I;; barbaloin biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; polyhydroxybutanoate biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of (Kdo)2-lipid A biosynthesis;; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; aloesone biosynthesis I;; cannabinoid biosynthesis;; ginsenoside degradation I;; sorgoleone biosynthesis;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; aromatic polyketides biosynthesis;; benzoyl-CoA degradation II (anaerobic);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; enterobacterial common antigen biosynthesis;; ; gallate degradation III (anaerobic);; phloridzin biosynthesis;; shisonin biosynthesis;; phenylphenalenone biosynthesis;; superpathway of L-threonine metabolism;; resveratrol biosynthesis;; (Kdo)2-lipid A biosynthesis I;; ginsenoside degradation II;; raspberry ketone biosynthesis;; gentiodelphin biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; amaranthin biosynthesis;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;;
metacyc_pathway_type POLYKETIDE-SYN; Super-Pathways;; Antibiotic-Biosynthesis;; Lipid-Biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; TERPENOID-DEG;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; GALLOTANNINS;; CDP-diacylglycerol-Biosynthesis;; THREONINE-DEG;; Lipid-Biosynthesis;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis;; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; Storage-Compounds-Biosynthesis;; Cell-Wall-Biosynthesis;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; POLYKETIDE-SYN;; TERPENOPHENOLICS-SYN;; Ginsenoside-Degradation;; QUINONE-SYN;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Benzoyl-CoA-Degradation;; Cell-Wall-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN; Super-Pathways;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ; GALLATE-DEG;; FLAVONOID-SYN;; ANTHOCYANIN-SYN;; POLYKETIDE-SYN;; Super-Pathways; THREONINE-DEG;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; Lipid-Biosynthesis;; Ginsenoside-Degradation;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; PHENYLALANINE-DEG;; BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; BETALAIN-ALKALOIDS;; Fatty-acid-biosynthesis;; METHANOGENESIS;;
pfam_acc PF00583; PF13302; PF13420;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain;
pfam_id Acetyltransf_1; Acetyltransf_3; Acetyltransf_4;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:4.2e-11 score:42.4 best_domain_score:42.0 name:Acetyltransf_1; db:Pfam-A.hmm|PF13302.7 evalue:9.9e-23 score:80.6 best_domain_score:80.3 name:Acetyltransf_3; db:Pfam-A.hmm|PF13420.7 evalue:3.8e-09 score:36.1 best_domain_score:35.9 name:Acetyltransf_4;
sprot_desc Putative ribosomal N-acetyltransferase YdaF;
sprot_id sp|P96579|YDAF_BACSU;
sprot_target db:uniprot_sprot|sp|P96579|YDAF_BACSU 1 179 evalue:6.9e-29 qcov:97.80 identity:37.00;
64751 63945 CDS
ID metaerg.pl|12463
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106192234.1 1 262 evalue:1.5e-94 qcov:97.80 identity:62.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:1.7e-12 score:47.0 best_domain_score:46.4 name:Lactamase_B;
64998 65672 CDS
ID metaerg.pl|12464
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium putridalgicola;
genomedb_acc GCF_900109825.1;
genomedb_target db:genomedb|GCF_900109825.1|WP_091488972.1 1 223 evalue:1.3e-27 qcov:99.60 identity:39.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
sp YES;
64998 65048 lipoprotein_signal_peptide
ID metaerg.pl|12465
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
66748 65945 CDS
ID metaerg.pl|12466
allec_ids 1.1.1.100;
allgo_ids GO:0003824; GO:0050662; GO:0102131; GO:0102132; GO:0004316; GO:0051287; GO:0050661; GO:0030497;
allko_ids K12420; K00059;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848643.1 1 265 evalue:1.5e-113 qcov:99.30 identity:80.80;
kegg_pathway_id 01040; 00061;
kegg_pathway_name Biosynthesis of unsaturated fatty acids; Fatty acid biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-6285; PWY-6113; PWY-5367; PWY-5989; PWY-5973; PWYG-321; BIOTIN-BIOSYNTHESIS-PWY; PWY-6282; PWY0-881; PWY-5156; PWY-5971; PWY-6519; FASYN-ELONG-PWY;
metacyc_pathway_name superpathway of fatty acids biosynthesis (E. coli);; superpathway of mycolate biosynthesis;; petroselinate biosynthesis;; stearate biosynthesis II (bacteria and plants);; cis-vaccenate biosynthesis;; mycolate biosynthesis;; biotin biosynthesis I;; palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate);; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of fatty acid biosynthesis II (plant);; palmitate biosynthesis II (bacteria and plants);; 8-amino-7-oxononanoate biosynthesis I;; fatty acid elongation -- saturated;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Unsaturated-Fatty-Acids-Biosynthesis;; Stearate-Biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Fatty-acid-biosynthesis;; BIOTIN-SYN; Super-Pathways;; Palmitoleate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Palmitate-Biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;; Fatty-acid-biosynthesis;;
pfam_acc PF00106; PF13561; PF01370; PF08659; PF02719; PF00070;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain; Polysaccharide biosynthesis protein; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id adh_short; adh_short_C2; Epimerase; KR; Polysacc_synt_2; Pyr_redox;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:2e-60 score:202.8 best_domain_score:202.4 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:7.7e-53 score:178.7 best_domain_score:178.4 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:6.2e-06 score:25.1 best_domain_score:24.4 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:2.9e-18 score:65.6 best_domain_score:65.0 name:KR; db:Pfam-A.hmm|PF02719.15 evalue:1.5e-05 score:23.6 best_domain_score:23.1 name:Polysacc_synt_2; db:Pfam-A.hmm|PF00070.27 evalue:8.8e-05 score:22.2 best_domain_score:21.3 name:Pyr_redox;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] reductase FabG;
sprot_id sp|Q9X248|FABG_THEMA;
sprot_target db:uniprot_sprot|sp|Q9X248|FABG_THEMA 11 265 evalue:6.6e-28 qcov:95.50 identity:33.30;
67011 67574 CDS
ID metaerg.pl|12467
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Tetragenococcus;s__Tetragenococcus halophilus;
genomedb_acc GCF_000283615.1;
genomedb_target db:genomedb|GCF_000283615.1|WP_014125084.1 1 186 evalue:3.8e-60 qcov:99.50 identity:59.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF08002;
pfam_desc Protein of unknown function (DUF1697);
pfam_id DUF1697;
pfam_target db:Pfam-A.hmm|PF08002.11 evalue:2e-29 score:102.0 best_domain_score:101.7 name:DUF1697;
67981 67637 CDS
ID metaerg.pl|12468
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_A;f__Planococcaceae;g__Bacillus_R;s__Bacillus_R cecembensis;
genomedb_acc GCF_001439635.1;
genomedb_target db:genomedb|GCF_001439635.1|WP_083493643.1 1 114 evalue:3.2e-33 qcov:100.00 identity:57.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF04266; PF12961;
pfam_desc ASCH domain; Domain of unknown function (DUF3850);
pfam_id ASCH; DUF3850;
pfam_target db:Pfam-A.hmm|PF04266.14 evalue:6.9e-15 score:54.8 best_domain_score:54.6 name:ASCH; db:Pfam-A.hmm|PF12961.7 evalue:2.5e-06 score:26.7 best_domain_score:26.2 name:DUF3850;
69449 68007 CDS
ID metaerg.pl|12469
allec_ids 2.4.1.-;
allgo_ids GO:0016757; GO:0016021; GO:0005886; GO:0008375; GO:0043708;
allko_ids K00729; K00694; K00710; K00721; K13693; K12997; K00698; K11936;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034301695.1 1 475 evalue:4.2e-220 qcov:99.00 identity:80.00;
kegg_pathway_id 00500; 01030; 00530; 00510;
kegg_pathway_name Starch and sucrose metabolism; Glycan structures - biosynthesis 1; Aminosugars metabolism; N-Glycan biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
metacyc_pathway_id PWY-5800; PWY-5161; PWY-4421; PWY-6397; PWY-5666; PWY-5160; PWY-5756; PWY-5139; PWY-5774; PWY-5926; PWY-5339; PWY-5398; PWY-5759; PWY-5286; PWY-5672; PWY-2021; PWY-5797; PWY-5338; PWY-6297; PWY-5400; PWY-5405; PWY-5342; PWY-5399; PWY-5307; PWY-2881; PWY-5343; PWY-5784; PWY-83; PWY-5379; PWY-5272; PWY-5284; ECASYN-PWY; PWY-5313; PWY-5397; PWY-5380; PWY-2901; PWY-6404; PWY-5793; PWY-5268; PWY-881;
metacyc_pathway_name xylan biosynthesis;; 6'-deoxychalcone metabolism;; curcumin glucoside biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; α-solanine/α-chaconine biosynthesis;; rose anthocyanin biosynthesis I (via cyanidin 5-O-β-D-glucoside);; saponin biosynthesis II;; pelargonidin conjugates biosynthesis;; saponin biosynthesis IV;; afrormosin conjugates interconversion;; chalcone 2'-O-glucoside biosynthesis;; crocetin esters biosynthesis;; saponin biosynthesis III;; anthocyanidin sophoroside metabolism;; ginsenosides biosynthesis;; indole-3-acetate inactivation IV;; indole-3-acetate inactivation VI;; galactosylcyclitol biosynthesis;; tuberonate glucoside biosynthesis;; amaranthin biosynthesis;; superpathway of betalain biosynthesis;; ajugose biosynthesis I (galactinol-dependent);; betacyanin biosynthesis;; gentiodelphin biosynthesis;; cytokinins 7-N-glucoside biosynthesis;; ajugose biosynthesis II (galactinol-independent);; indole-3-acetate inactivation VIII;; monolignol glucosides biosynthesis;; B series fagopyritols biosynthesis;; abscisic acid degradation by glucosylation;; shisonin biosynthesis;; enterobacterial common antigen biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; crocetin biosynthesis;; A series fagopyritols biosynthesis;; cytokinins 9-N-glucoside biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; maysin biosynthesis;; salvianin biosynthesis;; trehalose biosynthesis II;;
metacyc_pathway_type SECONDARY-CELL-WALL;; CHALCONE-SYN;; PHENYLPROPANOID-SYN; POLYKETIDE-SYN;; Cell-Wall-Biosynthesis;; ALKALOIDS-SYN;; ANTHOCYANIN-SYN;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN;; TRITERPENOID-SYN;; ISOFLAVONOID-SYN; Interconversion;; CHALCONE-SYN;; APOCAROTENOID-SYN;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN; Metabolic-Clusters;; TRITERPENOID-SYN;; Indole-3-Acetate-Inactivation;; Indole-3-Acetate-Inactivation;; Cyclitols-Biosynthesis;; Inactivation;; BETALAIN-ALKALOIDS;; BETALAIN-ALKALOIDS; Super-Pathways;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; BETALAIN-ALKALOIDS;; ANTHOCYANIN-SYN;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; Indole-3-Acetate-Inactivation;; LIGNIN-SYN; Metabolic-Clusters;; CYCLITOLS-DEG; SUGAR-DERIVS;; Abscisic-Acid-Degradation; Interconversion;; ANTHOCYANIN-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN; Super-Pathways;; APOCAROTENOID-SYN;; CYCLITOLS-DEG; SUGAR-DERIVS;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Cell-Wall-Biosynthesis; Super-Pathways;; FLAVONE-SYN;; ANTHOCYANIN-SYN;; Trehalose-biosynthesis;;
pfam_acc PF03142; PF00535; PF13641; PF13506; PF13632;
pfam_desc Chitin synthase; Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family 21; Glycosyl transferase family group 2;
pfam_id Chitin_synth_2; Glycos_transf_2; Glyco_tranf_2_3; Glyco_transf_21; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF03142.15 evalue:2.3e-14 score:52.2 best_domain_score:39.7 name:Chitin_synth_2; db:Pfam-A.hmm|PF00535.26 evalue:2.9e-23 score:81.8 best_domain_score:79.1 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:6.8e-22 score:77.7 best_domain_score:50.8 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13506.6 evalue:3e-07 score:29.3 best_domain_score:27.4 name:Glyco_transf_21; db:Pfam-A.hmm|PF13632.6 evalue:2e-13 score:50.0 best_domain_score:50.0 name:Glyco_trans_2_3;
sprot_desc Poly-beta-1,6-N-acetyl-D-glucosamine synthase;
sprot_id sp|Q5HKQ0|ICAA_STAEQ;
sprot_target db:uniprot_sprot|sp|Q5HKQ0|ICAA_STAEQ 15 400 evalue:7.4e-22 qcov:80.40 identity:28.10;
tm_num 5;
69449 68007 transmembrane_helix
ID metaerg.pl|12470
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology o68049-68117i68721-68789o69084-69152i69171-69239o69282-69350i;
70542 69493 CDS
ID metaerg.pl|12471
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848586.1 1 347 evalue:3.5e-107 qcov:99.40 identity:58.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF02985; PF13646;
pfam_desc HEAT repeat; HEAT repeats;
pfam_id HEAT; HEAT_2;
pfam_target db:Pfam-A.hmm|PF02985.22 evalue:4.9e-06 score:25.6 best_domain_score:11.7 name:HEAT; db:Pfam-A.hmm|PF13646.6 evalue:7.3e-18 score:64.0 best_domain_score:45.0 name:HEAT_2;
tm_num 1;
70542 69493 transmembrane_helix
ID metaerg.pl|12472
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology o69502-69570i;
72208 70556 CDS
ID metaerg.pl|12473
allgo_ids GO:0000160;
allko_ids K10916; K08479; K03388; K02668; K01768; K07710; K07640; K07716; K02489; K07636; K07638; K07653; K02480; K02482; K14489; K10715; K07678; K02026; K11527; K02030; K13587; K06379; K07676; K10681; K07650; K01769; K07644; K07709; K10125; K11357; K11617; K04757; K07769; K12767; K11383; K13761; K02486; K07675; K07717; K10942; K07647; K07637; K03407; K07682; K00936; K07777; K07654; K07652; K07639; K08475; K01120; K07673; K07641; K07646; K00873; K07711; K08884; K07768; K02575; K07778; K07683; K11354; K07718; K07651; K11623; K07648; K07679; K02478; K07642; K11711; K11640; K11356; K00760; K02484; K01937; K08282; K07704; K10909; K07645; K07677; K07708; K02491; K13490; K11231;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848585.1 1 550 evalue:2.3e-206 qcov:100.00 identity:65.80;
kegg_pathway_id 00790; 03090; 00620; 04011; 02020; 00240; 05111; 00230; 00983; 00710; 00010;
kegg_pathway_name Folate biosynthesis; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Drug metabolism - other enzymes; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00990; PF01627; PF00072;
pfam_desc Diguanylate cyclase, GGDEF domain; Hpt domain; Response regulator receiver domain;
pfam_id GGDEF; Hpt; Response_reg;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:1.2e-38 score:131.6 best_domain_score:130.5 name:GGDEF; db:Pfam-A.hmm|PF01627.23 evalue:6.1e-10 score:38.5 best_domain_score:36.9 name:Hpt; db:Pfam-A.hmm|PF00072.24 evalue:2.1e-53 score:178.5 best_domain_score:89.3 name:Response_reg;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:6.6e-40 score:135.7 best_domain_score:134.2 name:TIGR00254;
75499 72275 CDS
ID metaerg.pl|12474
allgo_ids GO:0000155; GO:0007165;
allko_ids K13587; K11527; K02030; K07678; K10715; K14489; K02482; K08801; K02480; K07653; K07638; K07636; K07697; K02489; K07716; K07710; K07640; K01768; K07656; K02668; K03388; K07674; K08479; K10916; K07647; K07680; K10942; K13040; K07717; K07675; K02486; K11383; K12767; K14509; K07769; K11520; K04757; K11357; K10125; K02342; K11629; K13532; K07709; K07644; K01769; K07650; K10681; K07676; K06379; K02478; K07679; K07648; K11623; K07651; K07698; K07718; K11354; K07683; K07778; K07768; K11633; K02575; K08884; K00873; K07711; K11328; K13533; K07646; K07641; K13598; K01120; K07673; K07639; K08475; K07652; K07654; K07777; K00936; K07682; K07649; K03407; K07637; K07643; K11231; K02491; K07708; K07645; K07677; K07704; K10909; K08282; K02484; K08082; K11356; K11640; K04486; K11711; K07642;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848584.1 1 1068 evalue:0.0e+00 qcov:99.40 identity:69.80;
kegg_pathway_id 03090; 00620; 04011; 02020; 00340; 00790; 00710; 00010; 03030; 00230; 05111;
kegg_pathway_name Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General; Histidine metabolism; Folate biosynthesis; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; DNA replication; Purine metabolism; Vibrio cholerae pathogenic cycle;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF02518; PF00512; PF00989; PF08447; PF08448; PF13426; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.1e-31 score:108.8 best_domain_score:107.6 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.1e-22 score:79.0 best_domain_score:76.9 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:2.6e-11 score:42.8 best_domain_score:38.5 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:3.7e-07 score:29.6 best_domain_score:28.1 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:1.1e-09 score:37.8 best_domain_score:29.0 name:PAS_4; db:Pfam-A.hmm|PF13426.7 evalue:5.3e-15 score:54.8 best_domain_score:48.9 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:1.1e-11 score:44.1 best_domain_score:42.8 name:Response_reg;
sp YES;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:2.1e-18 score:65.8 best_domain_score:51.9 name:TIGR00229;
tm_num 2;
72275 72394 signal_peptide
ID metaerg.pl|12475
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
75499 72275 transmembrane_helix
ID metaerg.pl|12476
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
topology o72317-72385i72824-72892o;
75854 75492 CDS
ID metaerg.pl|12477
allgo_ids GO:0000160; GO:0005829; GO:0032993; GO:0001216; GO:0003700; GO:0000156; GO:0000976;
allko_ids K07651; K07648; K07679; K02478; K07711; K02575; K07768; K07778; K11354; K07652; K07639; K08475; K07673; K01120; K07641; K07646; K07637; K03407; K07682; K07654; K02491; K11231; K01937; K08282; K10909; K07704; K07708; K07645; K07677; K11640; K11356; K00760; K02484; K07642; K11711; K10715; K07678; K11527; K07636; K07653; K02480; K02482; K01768; K07710; K07716; K02489; K10916; K08479; K03388; K02668; K07675; K07717; K07647; K10125; K11357; K04757; K07769; K12767; K13761; K11383; K02486; K07644; K07709; K06379; K07676; K10681; K07775;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848583.1 1 120 evalue:6.7e-42 qcov:100.00 identity:75.80;
kegg_pathway_id 00790; 03090; 04011; 02020; 00240; 05111; 00230; 00983;
kegg_pathway_name Folate biosynthesis; Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Drug metabolism - other enzymes;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
pfam_acc PF00072;
pfam_desc Response regulator receiver domain;
pfam_id Response_reg;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:3.6e-28 score:97.2 best_domain_score:97.0 name:Response_reg;
sprot_desc Transcriptional regulatory protein ResD;
sprot_id sp|P35163|RESD_BACSU;
sprot_target db:uniprot_sprot|sp|P35163|RESD_BACSU 4 118 evalue:1.8e-17 qcov:95.80 identity:47.80;
77433 75859 CDS
ID metaerg.pl|12478
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp001885615;
genomedb_acc GCF_001885615.1;
genomedb_target db:genomedb|GCF_001885615.1|WP_071848582.1 1 518 evalue:4.1e-237 qcov:98.90 identity:72.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0340955; 2.26406; 39.888; 0.00376538; 42.1899;
>Feature NODE_97_length_77026_cov_13.1407
436 23 CDS
ID metaerg.pl|12479
allgo_ids GO:0003677; GO:0032784; GO:0070063;
allko_ids K06140;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002366715;
genomedb_acc GCA_002366715.1;
genomedb_target db:genomedb|GCA_002366715.1|DFBS01000046.1_73 1 137 evalue:2.7e-63 qcov:100.00 identity:90.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF01272; PF14760;
pfam_desc Transcription elongation factor, GreA/GreB, C-term; Rnk N-terminus;
pfam_id GreA_GreB; Rnk_N;
pfam_target db:Pfam-A.hmm|PF01272.19 evalue:1.6e-15 score:56.0 best_domain_score:55.6 name:GreA_GreB; db:Pfam-A.hmm|PF14760.6 evalue:2.3e-09 score:36.8 best_domain_score:36.2 name:Rnk_N;
sprot_desc Regulator of nucleoside diphosphate kinase;
sprot_id sp|P0AFW6|RNK_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFW6|RNK_ECO57 4 135 evalue:2.3e-24 qcov:96.40 identity:41.70;
711 1778 CDS
ID metaerg.pl|12480
allec_ids 2.1.1.186;
allgo_ids GO:0008168; GO:0032259; GO:0005737; GO:0008757; GO:0006364;
allko_ids K06968;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233196.1 1 355 evalue:4.7e-200 qcov:100.00 identity:94.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF01728; PF18125;
pfam_desc FtsJ-like methyltransferase; RlmM ferredoxin-like domain;
pfam_id FtsJ; RlmM_FDX;
pfam_target db:Pfam-A.hmm|PF01728.19 evalue:5.6e-08 score:32.3 best_domain_score:31.4 name:FtsJ; db:Pfam-A.hmm|PF18125.1 evalue:8.2e-15 score:54.3 best_domain_score:53.4 name:RlmM_FDX;
sprot_desc Ribosomal RNA large subunit methyltransferase M;
sprot_id sp|Q1QUU9|RLMM_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QUU9|RLMM_CHRSD 4 353 evalue:7.2e-139 qcov:98.60 identity:67.40;
2129 1842 CDS
ID metaerg.pl|12481
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_007113141.1 1 95 evalue:2.5e-44 qcov:100.00 identity:92.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF03992;
pfam_desc Antibiotic biosynthesis monooxygenase;
pfam_id ABM;
pfam_target db:Pfam-A.hmm|PF03992.16 evalue:7.9e-11 score:41.2 best_domain_score:40.8 name:ABM;
2159 2413 CDS
ID metaerg.pl|12482
allgo_ids GO:0005737; GO:0097163; GO:0002143;
allko_ids K04085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87983.1 1 84 evalue:7.8e-37 qcov:100.00 identity:88.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF01206;
pfam_desc Sulfurtransferase TusA;
pfam_id TusA;
pfam_target db:Pfam-A.hmm|PF01206.17 evalue:4.6e-23 score:80.1 best_domain_score:79.9 name:TusA;
sprot_desc Sulfur carrier protein TusA;
sprot_id sp|B7UVF9|TUSA_PSEA8;
sprot_target db:uniprot_sprot|sp|B7UVF9|TUSA_PSEA8 10 82 evalue:7.6e-23 qcov:86.90 identity:67.10;
3300 2605 CDS
ID metaerg.pl|12483
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113139.1 1 231 evalue:2.7e-124 qcov:100.00 identity:92.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
4432 3446 CDS
ID metaerg.pl|12484
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008959951.1 1 328 evalue:8.6e-132 qcov:100.00 identity:72.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF11279;
pfam_desc Protein of unknown function (DUF3080);
pfam_id DUF3080;
pfam_target db:Pfam-A.hmm|PF11279.8 evalue:1.2e-54 score:185.0 best_domain_score:176.2 name:DUF3080;
sp YES;
3446 3502 lipoprotein_signal_peptide
ID metaerg.pl|12485
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
5855 4437 CDS
ID metaerg.pl|12486
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0042910; GO:0046677; GO:0006814;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87980.1 1 472 evalue:1.3e-237 qcov:100.00 identity:92.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF01554; PF14667;
pfam_desc MatE; Polysaccharide biosynthesis C-terminal domain;
pfam_id MatE; Polysacc_synt_C;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:6.1e-60 score:200.8 best_domain_score:113.5 name:MatE; db:Pfam-A.hmm|PF14667.6 evalue:2.2e-07 score:30.3 best_domain_score:30.3 name:Polysacc_synt_C;
sprot_desc Multidrug resistance protein MdtK;
sprot_id sp|Q7WTR3|MDTK_ERWAM;
sprot_target db:uniprot_sprot|sp|Q7WTR3|MDTK_ERWAM 12 471 evalue:9.3e-86 qcov:97.50 identity:38.70;
tigrfam_acc TIGR00797;
tigrfam_desc MATE efflux family protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name matE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00797 evalue:4.4e-89 score:298.3 best_domain_score:297.9 name:TIGR00797;
tm_num 12;
5855 4437 transmembrane_helix
ID metaerg.pl|12487
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i4494-4562o4626-4694i4731-4799o4842-4901i4938-5006o5064-5132i5226-5294o5322-5390i5448-5516o5559-5627i5661-5729o5757-5825i;
5987 6574 CDS
ID metaerg.pl|12488
allec_ids 1.14.-.-;
allgo_ids GO:0046872; GO:0004497; GO:0016709; GO:1901260; GO:0043687;
allko_ids K09906;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000005.1_81 1 189 evalue:5.5e-86 qcov:96.90 identity:82.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id PWY-6442; PWY-699; PWY-2582; PWY-6544; PWY-2961; PWY-1381; PWY-5479; FLUORENE-DEG-9-ONE-PWY; PWY-6494; P481-PWY;
metacyc_pathway_name spermidine hydroxycinnamic acid conjugates biosynthesis;; brassinosteroid biosynthesis I;; brassinosteroid biosynthesis II;; superpathway of C28 brassinosteroid biosynthesis;; sesquiterpenoid phytoalexins biosynthesis;; fluorene degradation II;; 6-methoxypodophyllotoxin biosynthesis;; fluorene degradation I;; gibberellin inactivation III (epoxidation);; adamantanone degradation;;
metacyc_pathway_type N-CONTAINING-SECONDARY-CMPD-SYN;; Brassinosteroid-Biosynthesis;; Brassinosteroid-Biosynthesis;; Super-Pathways;; SESQUITERPENOID-SYN; TERPENOID-PHYTOALEXINS;; Fluorene-Degradation;; LIGNAN-SYN;; Fluorene-Degradation;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Other-Degradation;;
pfam_acc PF04315;
pfam_desc Elongation factor P hydroxylase;
pfam_id EpmC;
pfam_target db:Pfam-A.hmm|PF04315.12 evalue:1.9e-71 score:238.3 best_domain_score:238.0 name:EpmC;
sprot_desc Elongation factor P hydroxylase;
sprot_id sp|P76938|EPMC_ECOLI;
sprot_target db:uniprot_sprot|sp|P76938|EPMC_ECOLI 11 176 evalue:2.8e-44 qcov:85.10 identity:50.60;
7050 6571 CDS
ID metaerg.pl|12489
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113135.1 1 159 evalue:5.5e-84 qcov:100.00 identity:96.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
7948 7055 CDS
ID metaerg.pl|12490
allec_ids 3.1.11.-;
allgo_ids GO:0016788; GO:0005737; GO:0000175; GO:0016888; GO:0000287; GO:0008310;
allko_ids K03424;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113134.1 12 293 evalue:6.3e-150 qcov:94.90 identity:91.80;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF01026;
pfam_desc TatD related DNase;
pfam_id TatD_DNase;
pfam_target db:Pfam-A.hmm|PF01026.21 evalue:1.3e-63 score:214.0 best_domain_score:213.8 name:TatD_DNase;
sprot_desc 3'-5' ssDNA/RNA exonuclease TatD;
sprot_id sp|D2TUZ4|TATD_CITRI;
sprot_target db:uniprot_sprot|sp|D2TUZ4|TATD_CITRI 33 288 evalue:1.1e-73 qcov:86.20 identity:52.00;
8151 9380 CDS
ID metaerg.pl|12491
allko_ids K01999;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693622.1 2 409 evalue:4.0e-219 qcov:99.80 identity:93.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF01094; PF13433; PF13458;
pfam_desc Receptor family ligand binding region; Periplasmic binding protein domain; Periplasmic binding protein;
pfam_id ANF_receptor; Peripla_BP_5; Peripla_BP_6;
pfam_target db:Pfam-A.hmm|PF01094.28 evalue:9.2e-08 score:30.8 best_domain_score:30.2 name:ANF_receptor; db:Pfam-A.hmm|PF13433.6 evalue:2e-16 score:59.2 best_domain_score:58.3 name:Peripla_BP_5; db:Pfam-A.hmm|PF13458.6 evalue:8.7e-86 score:287.9 best_domain_score:287.6 name:Peripla_BP_6;
sp YES;
8151 8234 signal_peptide
ID metaerg.pl|12492
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
9421 10971 CDS
ID metaerg.pl|12493
allec_ids 6.2.1.3;
allgo_ids GO:0003824; GO:0005886; GO:0003996; GO:0005524; GO:0102391; GO:0004467; GO:0006633;
allko_ids K01904; K01909; K01784; K01895; K00666; K01652; K01897; K03367; K00143; K01776; K05939; K01586; K01913; K01779; K01912; K02364; K00992;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_009288639.1 1 516 evalue:1.4e-258 qcov:100.00 identity:88.60;
kegg_pathway_id 00300; 00960; 00640; 00650; 00903; 00620; 00632; 00940; 00720; 00520; 00360; 00071; 00660; 00471; 00061; 00052; 00251; 00252; 00473; 00770; 01053; 00930; 00290; 00281; 00564; 00010; 00310;
kegg_pathway_name Lysine biosynthesis; Alkaloid biosynthesis II; Propanoate metabolism; Butanoate metabolism; Limonene and pinene degradation; Pyruvate metabolism; Benzoate degradation via CoA ligation; Phenylpropanoid biosynthesis; Reductive carboxylate cycle (CO2 fixation); Nucleotide sugars metabolism; Phenylalanine metabolism; Fatty acid metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid biosynthesis; Galactose metabolism; Glutamate metabolism; Alanine and aspartate metabolism; D-Alanine metabolism; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; Caprolactam degradation; Valine, leucine and isoleucine biosynthesis; Geraniol degradation; Glycerophospholipid metabolism; Glycolysis / Gluconeogenesis; Lysine degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id PWY-561; FAO-PWY; PWY-5972; PWY-5143; P221-PWY; PWY-5995; PWY-5136; PWY-6001; PWY-6000;
metacyc_pathway_name superpathway of glyoxylate cycle and fatty acid degradation;; fatty acid β-oxidation I;; stearate biosynthesis I (animals and fungi);; long-chain fatty acid activation;; octane oxidation;; linoleate biosynthesis I (plants);; fatty acid β-oxidation II (peroxisome);; linoleate biosynthesis II (animals);; γ-linolenate biosynthesis II (animals);;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; Fatty-Acid-Degradation;; Stearate-Biosynthesis;; Activation; Lipid-Biosynthesis;; Other-Degradation;; Linoleate-Biosynthesis;; Fatty-Acid-Degradation;; Linoleate-Biosynthesis;; Gamma-linolenate-Biosynthesis;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:3.4e-99 score:331.5 best_domain_score:331.2 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:1.5e-22 score:79.5 best_domain_score:78.2 name:AMP-binding_C;
sprot_desc Long-chain-fatty-acid--CoA ligase FadD13;
sprot_id sp|P9WQ36|FAC13_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WQ36|FAC13_MYCTO 38 513 evalue:3.4e-57 qcov:92.20 identity:31.50;
11088 12275 CDS
ID metaerg.pl|12494
allec_ids 2.3.1.16;
allgo_ids GO:0016747; GO:0003985;
allko_ids K07509; K00632; K00626; K02615; K07550; K07508; K07823; K07513;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113133.1 1 394 evalue:2.0e-199 qcov:99.70 identity:90.40;
kegg_pathway_id 00310; 00280; 00281; 00072; 02020; 00071; 00120; 00632; 00380; 00620; 00062; 01040; 00362; 00592; 00650; 00640;
kegg_pathway_name Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Synthesis and degradation of ketone bodies; Two-component system - General; Fatty acid metabolism; Bile acid biosynthesis; Benzoate degradation via CoA ligation; Tryptophan metabolism; Pyruvate metabolism; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation; alpha-Linolenic acid metabolism; Butanoate metabolism; Propanoate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id PWY-5136; PWY-561; FAO-PWY; PWY-6435;
metacyc_pathway_name fatty acid β-oxidation II (peroxisome);; superpathway of glyoxylate cycle and fatty acid degradation;; fatty acid β-oxidation I;; 4-hydroxybenzoate biosynthesis III (plants);;
metacyc_pathway_type Fatty-Acid-Degradation;; Energy-Metabolism; Super-Pathways;; Fatty-Acid-Degradation;; 4-Hydroxybenzoate-Biosynthesis;;
pfam_acc PF00109; PF02803; PF00108;
pfam_desc Beta-ketoacyl synthase, N-terminal domain; Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id ketoacyl-synt; Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF00109.26 evalue:7.8e-06 score:24.9 best_domain_score:15.2 name:ketoacyl-synt; db:Pfam-A.hmm|PF02803.18 evalue:1.9e-45 score:152.7 best_domain_score:152.7 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:3e-81 score:271.8 best_domain_score:271.1 name:Thiolase_N;
sprot_desc Beta-ketothiolase BktB;
sprot_id sp|Q0KBP1|BKTB_CUPNH;
sprot_target db:uniprot_sprot|sp|Q0KBP1|BKTB_CUPNH 5 394 evalue:3.8e-117 qcov:98.70 identity:55.80;
tigrfam_acc TIGR01930;
tigrfam_desc acetyl-CoA C-acyltransferase;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:3.9e-133 score:443.3 best_domain_score:443.1 name:TIGR01930;
12318 13970 CDS
ID metaerg.pl|12495
allec_ids 6.2.1.3;
allgo_ids GO:0003824; GO:0003996; GO:0005524; GO:0102391; GO:0004467; GO:0046872;
allko_ids K00143; K03367; K01776; K05939; K01586; K01779; K02364; K00992; K01909; K01904; K01895; K01784; K01652; K01897; K00666;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_050713368.1 1 550 evalue:3.4e-298 qcov:100.00 identity:91.60;
kegg_pathway_id 00520; 00720; 00940; 00620; 00650; 00640; 00300; 00564; 00010; 00310; 00290; 00770; 01053; 00473; 00252; 00251; 00061; 00660; 00471; 00052; 00071;
kegg_pathway_name Nucleotide sugars metabolism; Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis; Pyruvate metabolism; Butanoate metabolism; Propanoate metabolism; Lysine biosynthesis; Glycerophospholipid metabolism; Glycolysis / Gluconeogenesis; Lysine degradation; Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; D-Alanine metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Fatty acid biosynthesis; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Galactose metabolism; Fatty acid metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id PWY-6000; PWY-6001; PWY-5995; PWY-5136; P221-PWY; PWY-5143; PWY-5972; FAO-PWY; PWY-561;
metacyc_pathway_name γ-linolenate biosynthesis II (animals);; linoleate biosynthesis II (animals);; linoleate biosynthesis I (plants);; fatty acid β-oxidation II (peroxisome);; octane oxidation;; long-chain fatty acid activation;; stearate biosynthesis I (animals and fungi);; fatty acid β-oxidation I;; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Gamma-linolenate-Biosynthesis;; Linoleate-Biosynthesis;; Linoleate-Biosynthesis;; Fatty-Acid-Degradation;; Other-Degradation;; Activation; Lipid-Biosynthesis;; Stearate-Biosynthesis;; Fatty-Acid-Degradation;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:1.1e-81 score:273.9 best_domain_score:273.6 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:1.3e-16 score:60.5 best_domain_score:59.3 name:AMP-binding_C;
sprot_desc Long-chain-fatty-acid--CoA ligase;
sprot_id sp|Q5SKN9|LCFCS_THET8;
sprot_target db:uniprot_sprot|sp|Q5SKN9|LCFCS_THET8 19 549 evalue:5.0e-99 qcov:96.50 identity:38.40;
15000 13987 CDS
ID metaerg.pl|12496
allgo_ids GO:0003700; GO:0006355; GO:0043565;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_082906594.1 1 337 evalue:2.7e-173 qcov:100.00 identity:89.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF12625; PF12833; PF00165;
pfam_desc Arabinose-binding domain of AraC transcription regulator, N-term; Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id Arabinose_bd; HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF12625.7 evalue:2.8e-31 score:108.3 best_domain_score:108.3 name:Arabinose_bd; db:Pfam-A.hmm|PF12833.7 evalue:1.5e-17 score:62.9 best_domain_score:61.1 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:5.1e-10 score:38.4 best_domain_score:23.3 name:HTH_AraC;
15164 17080 CDS
ID metaerg.pl|12497
allec_ids 3.6.3.41;
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0003677; GO:0004832; GO:0006438;
allko_ids K02000; K11962; K01990; K02023; K02013; K09687; K06857; K05816; K02193; K02049; K01995; K02065; K10111; K01998; K11072; K02045; K01996; K06861; K02071; K10441; K05776; K02017; K02032; K05847; K09817; K02056; K02010; K01997; K02052; K02006; K15738;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035556919.1 1 638 evalue:0.0e+00 qcov:100.00 identity:96.40;
kegg_pathway_id 00910; 02010;
kegg_pathway_name Nitrogen metabolism; ABC transporters - General;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF13304; PF00005; PF16326; PF12848; PF01926;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; ABC transporter C-terminal domain; ABC transporter; 50S ribosome-binding GTPase;
pfam_id AAA_21; ABC_tran; ABC_tran_CTD; ABC_tran_Xtn; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:6.2e-13 score:48.4 best_domain_score:15.9 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:3.1e-52 score:176.0 best_domain_score:93.3 name:ABC_tran; db:Pfam-A.hmm|PF16326.5 evalue:3.8e-22 score:77.6 best_domain_score:70.2 name:ABC_tran_CTD; db:Pfam-A.hmm|PF12848.7 evalue:1.1e-09 score:37.4 best_domain_score:37.4 name:ABC_tran_Xtn; db:Pfam-A.hmm|PF01926.23 evalue:2.1e-05 score:23.8 best_domain_score:11.9 name:MMR_HSR1;
sprot_desc ABC transporter ATP-binding protein uup-1;
sprot_id sp|Q57242|UUP1_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57242|UUP1_HAEIN 1 632 evalue:7.0e-169 qcov:99.10 identity:49.90;
tigrfam_acc TIGR01189;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:1.4e-41 score:141.5 best_domain_score:71.3 name:TIGR01189;
17667 17215 CDS
ID metaerg.pl|12498
allgo_ids GO:0005737;
allko_ids K06149;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas lionensis;
genomedb_acc GCF_002087295.1;
genomedb_target db:genomedb|GCF_002087295.1|WP_083026081.1 1 150 evalue:7.5e-75 qcov:100.00 identity:94.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.9e-29 score:102.2 best_domain_score:102.0 name:Usp;
sprot_desc Universal stress protein A homolog 2;
sprot_id sp|P45680|USPA2_COXBU;
sprot_target db:uniprot_sprot|sp|P45680|USPA2_COXBU 2 141 evalue:1.3e-20 qcov:93.30 identity:45.10;
17830 18372 CDS
ID metaerg.pl|12499
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87967.1 1 179 evalue:1.6e-76 qcov:99.40 identity:77.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
sp YES;
tm_num 1;
17830 17922 signal_peptide
ID metaerg.pl|12500
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
17830 18372 transmembrane_helix
ID metaerg.pl|12501
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology o17839-17892i;
18836 18384 CDS
ID metaerg.pl|12502
allgo_ids GO:0003700; GO:0006355; GO:0003677;
allko_ids K06075;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035556925.1 1 150 evalue:3.7e-74 qcov:100.00 identity:91.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF13463; PF01047; PF12802;
pfam_desc Winged helix DNA-binding domain; MarR family; MarR family;
pfam_id HTH_27; MarR; MarR_2;
pfam_target db:Pfam-A.hmm|PF13463.6 evalue:5.9e-08 score:32.3 best_domain_score:31.4 name:HTH_27; db:Pfam-A.hmm|PF01047.22 evalue:7.6e-15 score:53.8 best_domain_score:53.2 name:MarR; db:Pfam-A.hmm|PF12802.7 evalue:4.4e-10 score:38.5 best_domain_score:37.9 name:MarR_2;
sprot_desc Transcriptional regulator SlyA;
sprot_id sp|A7FHL4|SLYA_YERP3;
sprot_target db:uniprot_sprot|sp|A7FHL4|SLYA_YERP3 1 143 evalue:1.9e-32 qcov:95.30 identity:46.90;
20067 18943 CDS
ID metaerg.pl|12503
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693613.1 1 373 evalue:1.2e-193 qcov:99.70 identity:87.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF11141;
pfam_desc Protein of unknown function (DUF2914);
pfam_id DUF2914;
pfam_target db:Pfam-A.hmm|PF11141.8 evalue:5.3e-21 score:73.4 best_domain_score:72.6 name:DUF2914;
tm_num 6;
20067 18943 transmembrane_helix
ID metaerg.pl|12504
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology o19027-19080i19093-19161o19279-19347i19384-19452o19465-19533i19552-19620o;
20365 22551 CDS
ID metaerg.pl|12505
allec_ids 4.2.1.17; 5.1.2.3; 5.3.3.8; 1.1.1.35; 4.2.1.17 5.3.3.8 1.1.1.35 5.1.2.3;
allgo_ids GO:0003857; GO:0006631; GO:0016491; GO:0055114; GO:0036125; GO:0008692; GO:0004165; GO:0004300; GO:0006635;
allko_ids K13767; K15016; K05556; K13816; K07516; K01782; K01692; K00022; K07511; K01825; K10527; K07515; K07514;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_027958889.1 1 728 evalue:0.0e+00 qcov:100.00 identity:97.00;
kegg_pathway_id 00062; 00903; 01040; 00071; 01057; 00592; 00410; 00650; 00640; 00310; 00280; 00281; 00930; 00632; 00380;
kegg_pathway_name Fatty acid elongation in mitochondria; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; Fatty acid metabolism; Biosynthesis of type II polyketide products; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Butanoate metabolism; Propanoate metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Caprolactam degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id ILEUDEG-PWY; FAO-PWY; PWY-5177; PWY-5136; GLUDEG-II-PWY; PWY-561; PWY-5184; PWY-5789; PWY-6435; CENTFERM-PWY; VALDEG-PWY; PWY-5137; PWY-5138; P3-PWY; TRYPTOPHAN-DEGRADATION-1;
metacyc_pathway_name L-isoleucine degradation I;; fatty acid β-oxidation I;; glutaryl-CoA degradation;; fatty acid β-oxidation II (peroxisome);; L-glutamate degradation VII (to butanoate);; superpathway of glyoxylate cycle and fatty acid degradation;; toluene degradation VI (anaerobic);; 3-hydroxypropanoate/4-hydroxybutanate cycle;; 4-hydroxybenzoate biosynthesis III (plants);; pyruvate fermentation to butanoate;; L-valine degradation I;; fatty acid β-oxidation III (unsaturated, odd number);; unsaturated, even numbered fatty acid β-oxidation;; gallate degradation III (anaerobic);; L-tryptophan degradation III (eukaryotic);;
metacyc_pathway_type ISOLEUCINE-DEG;; Fatty-Acid-Degradation;; CARBOXYLATES-DEG;; Fatty-Acid-Degradation;; Acetyl-CoA-Butyrate; GLUTAMATE-DEG; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; Autotrophic-CO2-Fixation;; 4-Hydroxybenzoate-Biosynthesis;; Acetyl-CoA-Butyrate; Pyruvate-Degradation;; VALINE-DEG;; Fatty-Acid-Degradation;; Fatty-Acid-Degradation;; GALLATE-DEG;; Super-Pathways; TRYPTOPHAN-DEG;;
pfam_acc PF00725; PF02737; PF00378; PF16113;
pfam_desc 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id 3HCDH; 3HCDH_N; ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00725.22 evalue:6.3e-33 score:112.5 best_domain_score:87.9 name:3HCDH; db:Pfam-A.hmm|PF02737.18 evalue:3.1e-62 score:208.9 best_domain_score:207.6 name:3HCDH_N; db:Pfam-A.hmm|PF00378.20 evalue:3.1e-38 score:130.7 best_domain_score:129.8 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:1.7e-21 score:76.3 best_domain_score:75.3 name:ECH_2;
sprot_desc Fatty acid oxidation complex subunit alpha;
sprot_id sp|B7UYR6|FADB_PSEA8;
sprot_target db:uniprot_sprot|sp|B7UYR6|FADB_PSEA8 1 719 evalue:7.0e-274 qcov:98.80 identity:68.00;
tigrfam_acc TIGR02437;
tigrfam_desc fatty oxidation complex, alpha subunit FadB;
tigrfam_mainrole Fatty acid and phospholipid metabolism;
tigrfam_name FadB;
tigrfam_sub1role Degradation;
tigrfam_target db:TIGRFAMs.hmm|TIGR02437 evalue:0 score:1160.7 best_domain_score:1160.5 name:TIGR02437;
22575 23753 CDS
ID metaerg.pl|12506
allec_ids 2.3.1.16;
allgo_ids GO:0016747; GO:0005737; GO:0003988; GO:0006635;
allko_ids K07513; K07823; K07508; K07550; K00626; K00632; K07509; K02615;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233217.1 1 392 evalue:4.3e-215 qcov:100.00 identity:99.50;
kegg_pathway_id 00592; 00650; 00640; 00062; 00620; 01040; 00362; 00380; 00632; 00120; 00071; 00072; 02020; 00280; 00281; 00310;
kegg_pathway_name alpha-Linolenic acid metabolism; Butanoate metabolism; Propanoate metabolism; Fatty acid elongation in mitochondria; Pyruvate metabolism; Biosynthesis of unsaturated fatty acids; Benzoate degradation via hydroxylation; Tryptophan metabolism; Benzoate degradation via CoA ligation; Bile acid biosynthesis; Fatty acid metabolism; Synthesis and degradation of ketone bodies; Two-component system - General; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id PWY-5136; PWY-6435; FAO-PWY; PWY-561;
metacyc_pathway_name fatty acid β-oxidation II (peroxisome);; 4-hydroxybenzoate biosynthesis III (plants);; fatty acid β-oxidation I;; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Fatty-Acid-Degradation;; 4-Hydroxybenzoate-Biosynthesis;; Fatty-Acid-Degradation;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF02803; PF00108;
pfam_desc Thiolase, C-terminal domain; Thiolase, N-terminal domain;
pfam_id Thiolase_C; Thiolase_N;
pfam_target db:Pfam-A.hmm|PF02803.18 evalue:6.2e-45 score:151.1 best_domain_score:150.2 name:Thiolase_C; db:Pfam-A.hmm|PF00108.23 evalue:5.5e-74 score:248.0 best_domain_score:247.4 name:Thiolase_N;
sprot_desc 3-ketoacyl-CoA thiolase;
sprot_id sp|Q1QUW9|FADA_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QUW9|FADA_CHRSD 1 392 evalue:4.0e-191 qcov:100.00 identity:87.20;
tigrfam_acc TIGR01930; TIGR02445;
tigrfam_desc acetyl-CoA C-acyltransferase; acetyl-CoA C-acyltransferase FadA;
tigrfam_mainrole Fatty acid and phospholipid metabolism; Fatty acid and phospholipid metabolism;
tigrfam_name AcCoA-C-Actrans; fadA;
tigrfam_sub1role Other; Degradation;
tigrfam_target db:TIGRFAMs.hmm|TIGR01930 evalue:8.2e-133 score:442.2 best_domain_score:442.0 name:TIGR01930; db:TIGRFAMs.hmm|TIGR02445 evalue:2.6e-187 score:621.6 best_domain_score:621.5 name:TIGR02445;
24921 23830 CDS
ID metaerg.pl|12507
allec_ids 3.5.1.-;
allgo_ids GO:0004407; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035580302.1 1 362 evalue:8.1e-200 qcov:99.70 identity:94.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id PWY-5784; LYSDEGII-PWY; PWY-5327; PWY-1822; PWY-6548; PWY-0;
metacyc_pathway_name indole-3-acetate inactivation VIII;; L-lysine degradation III;; superpathway of L-lysine degradation;; indole-3-acetate activation I;; ; putrescine degradation III;;
metacyc_pathway_type Indole-3-Acetate-Inactivation;; LYSINE-DEG;; LYSINE-DEG; Super-Pathways;; Activation;; ; Putrescine-Degradation;;
pfam_acc PF00850;
pfam_desc Histone deacetylase domain;
pfam_id Hist_deacetyl;
pfam_target db:Pfam-A.hmm|PF00850.19 evalue:2.5e-84 score:282.6 best_domain_score:282.2 name:Hist_deacetyl;
sprot_desc Probable deacetylase AF_0130;
sprot_id sp|O30107|Y130_ARCFU;
sprot_target db:uniprot_sprot|sp|O30107|Y130_ARCFU 46 334 evalue:1.6e-53 qcov:79.60 identity:39.80;
25561 25085 CDS
ID metaerg.pl|12508
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis_A;
genomedb_acc GCF_002211105.1;
genomedb_target db:genomedb|GCF_002211105.1|WP_088700481.1 1 157 evalue:7.2e-76 qcov:99.40 identity:86.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF03358;
pfam_desc NADPH-dependent FMN reductase;
pfam_id FMN_red;
pfam_target db:Pfam-A.hmm|PF03358.15 evalue:3.8e-07 score:29.2 best_domain_score:28.9 name:FMN_red;
25654 26028 CDS
ID metaerg.pl|12509
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113122.1 1 124 evalue:5.7e-52 qcov:100.00 identity:79.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF04134;
pfam_desc Protein of unknown function, DUF393;
pfam_id DUF393;
pfam_target db:Pfam-A.hmm|PF04134.12 evalue:1.1e-16 score:61.3 best_domain_score:61.2 name:DUF393;
tm_num 1;
25654 26028 transmembrane_helix
ID metaerg.pl|12510
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology o25909-25977i;
26052 26633 CDS
ID metaerg.pl|12511
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_045812108.1 1 192 evalue:4.3e-67 qcov:99.50 identity:71.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
sp YES;
26052 26105 lipoprotein_signal_peptide
ID metaerg.pl|12512
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
26708 27184 CDS
ID metaerg.pl|12513
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis_A;
genomedb_acc GCF_002211105.1;
genomedb_target db:genomedb|GCF_002211105.1|WP_088700483.1 1 158 evalue:3.7e-80 qcov:100.00 identity:88.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF01161;
pfam_desc Phosphatidylethanolamine-binding protein;
pfam_id PBP;
pfam_target db:Pfam-A.hmm|PF01161.20 evalue:6.2e-34 score:116.4 best_domain_score:116.1 name:PBP;
sp YES;
tigrfam_acc TIGR00481;
tigrfam_desc Raf kinase inhibitor-like protein, YbhB/YbcL family;
tigrfam_mainrole Unknown function;
tigrfam_name TIGR00481;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00481 evalue:1.8e-28 score:98.3 best_domain_score:97.7 name:TIGR00481;
26708 26755 signal_peptide
ID metaerg.pl|12514
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
27273 27617 CDS
ID metaerg.pl|12515
allko_ids K06193;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF59948.1 1 114 evalue:4.7e-53 qcov:100.00 identity:93.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF03831; PF08274;
pfam_desc PhnA domain; PhnA Zinc-Ribbon;
pfam_id PhnA; PhnA_Zn_Ribbon;
pfam_target db:Pfam-A.hmm|PF03831.14 evalue:1.4e-33 score:113.8 best_domain_score:113.6 name:PhnA; db:Pfam-A.hmm|PF08274.12 evalue:1.8e-13 score:49.4 best_domain_score:48.8 name:PhnA_Zn_Ribbon;
sprot_desc hypothetical protein;
sprot_id sp|P0AFJ3|YJDM_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFJ3|YJDM_ECO57 4 113 evalue:6.7e-38 qcov:96.50 identity:69.10;
tigrfam_acc TIGR00686;
tigrfam_desc putative alkylphosphonate utilization operon protein PhnA;
tigrfam_mainrole Unknown function;
tigrfam_name phnA;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00686 evalue:3.3e-48 score:161.6 best_domain_score:161.4 name:TIGR00686;
27914 27714 CDS
ID metaerg.pl|12516
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008957031.1 1 66 evalue:2.0e-19 qcov:100.00 identity:83.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF14070;
pfam_desc Putative motility protein;
pfam_id YjfB_motility;
pfam_target db:Pfam-A.hmm|PF14070.6 evalue:5.1e-09 score:35.4 best_domain_score:35.2 name:YjfB_motility;
28154 28684 CDS
ID metaerg.pl|12517
allgo_ids GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008957030.1 23 176 evalue:8.2e-73 qcov:87.50 identity:98.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF09339; PF02082;
pfam_desc IclR helix-turn-helix domain; Transcriptional regulator;
pfam_id HTH_IclR; Rrf2;
pfam_target db:Pfam-A.hmm|PF09339.10 evalue:6e-05 score:22.0 best_domain_score:20.7 name:HTH_IclR; db:Pfam-A.hmm|PF02082.20 evalue:5e-22 score:77.3 best_domain_score:76.5 name:Rrf2;
sprot_desc Putative HTH-type transcriptional regulator MT1325;
sprot_id sp|P9WME2|Y1287_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WME2|Y1287_MYCTO 24 156 evalue:1.7e-08 qcov:75.60 identity:34.10;
tigrfam_acc TIGR00738; TIGR02944;
tigrfam_desc Rrf2 family protein; FeS assembly SUF system regulator;
tigrfam_mainrole Unknown function; Regulatory functions;
tigrfam_name rrf2_super; suf_reg_Xantho;
tigrfam_sub1role General; DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00738 evalue:7.1e-30 score:102.7 best_domain_score:102.4 name:TIGR00738; db:TIGRFAMs.hmm|TIGR02944 evalue:6.9e-44 score:148.6 best_domain_score:148.2 name:TIGR02944;
28764 30206 CDS
ID metaerg.pl|12518
allgo_ids GO:0016226;
allko_ids K09014;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008957029.1 1 480 evalue:1.2e-280 qcov:100.00 identity:99.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF01458;
pfam_desc Uncharacterized protein family (UPF0051);
pfam_id UPF0051;
pfam_target db:Pfam-A.hmm|PF01458.17 evalue:2e-66 score:223.0 best_domain_score:222.7 name:UPF0051;
sprot_desc hypothetical protein;
sprot_id sp|Q55790|Y074_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55790|Y074_SYNY3 1 480 evalue:4.7e-202 qcov:100.00 identity:70.40;
tigrfam_acc TIGR01980;
tigrfam_desc FeS assembly protein SufB;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name sufB;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01980 evalue:2.3e-189 score:628.8 best_domain_score:628.6 name:TIGR01980;
30283 31032 CDS
ID metaerg.pl|12519
allgo_ids GO:0005524; GO:0009842; GO:0016887;
allko_ids K09013; K06861;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87955.1 1 249 evalue:1.0e-129 qcov:100.00 identity:98.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:8.8e-07 score:28.2 best_domain_score:14.5 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:9e-22 score:77.3 best_domain_score:76.9 name:ABC_tran;
sprot_desc Probable ATP-dependent transporter ycf16;
sprot_id sp|P48255|ABCX_CYAPA;
sprot_target db:uniprot_sprot|sp|P48255|ABCX_CYAPA 1 246 evalue:2.6e-79 qcov:98.80 identity:59.30;
tigrfam_acc TIGR01978;
tigrfam_desc FeS assembly ATPase SufC;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name sufC;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01978 evalue:6.7e-109 score:362.1 best_domain_score:362.0 name:TIGR01978;
31029 32369 CDS
ID metaerg.pl|12520
allgo_ids GO:0016226;
allko_ids K09015;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87954.1 1 446 evalue:2.2e-239 qcov:100.00 identity:95.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF01458;
pfam_desc Uncharacterized protein family (UPF0051);
pfam_id UPF0051;
pfam_target db:Pfam-A.hmm|PF01458.17 evalue:1.4e-70 score:236.7 best_domain_score:236.0 name:UPF0051;
sprot_desc hypothetical protein;
sprot_id sp|Q55792|Y076_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55792|Y076_SYNY3 8 425 evalue:2.7e-58 qcov:93.70 identity:34.10;
tigrfam_acc TIGR01981;
tigrfam_desc FeS assembly protein SufD;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name sufD;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01981 evalue:1.7e-79 score:266.2 best_domain_score:265.8 name:TIGR01981;
32389 33654 CDS
ID metaerg.pl|12521
allec_ids 2.8.1.7;
allgo_ids GO:0009058; GO:0030170; GO:0031071; GO:0008483; GO:0006534; GO:0016226;
allko_ids K04487; K11717; K01556; K01766;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87953.1 1 421 evalue:1.0e-225 qcov:100.00 identity:92.20;
kegg_pathway_id 00730; 00380;
kegg_pathway_name Thiamine metabolism; Tryptophan metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id PWY0-1021; PWY0-1061;
metacyc_pathway_name L-alanine biosynthesis III;; superpathway of L-alanine biosynthesis;;
metacyc_pathway_type ALANINE-SYN;; ALANINE-SYN; Super-Pathways;;
pfam_acc PF00155; PF00266;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V;
pfam_id Aminotran_1_2; Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:1e-12 score:47.2 best_domain_score:43.3 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:9.1e-148 score:491.4 best_domain_score:491.2 name:Aminotran_5;
sprot_desc Probable cysteine desulfurase;
sprot_id sp|Q9KPQ7|CSD_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KPQ7|CSD_VIBCH 22 420 evalue:1.5e-122 qcov:94.80 identity:52.60;
tigrfam_acc TIGR01979;
tigrfam_desc cysteine desulfurase, SufS family;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name sufS;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01979 evalue:1.4e-175 score:583.1 best_domain_score:583.0 name:TIGR01979;
33676 34245 CDS
ID metaerg.pl|12522
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233228.1 1 189 evalue:2.7e-98 qcov:100.00 identity:97.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF01883;
pfam_desc Iron-sulfur cluster assembly protein;
pfam_id FeS_assembly_P;
pfam_target db:Pfam-A.hmm|PF01883.19 evalue:1.8e-13 score:49.7 best_domain_score:48.5 name:FeS_assembly_P;
tigrfam_acc TIGR03406;
tigrfam_desc probable FeS assembly SUF system protein SufT;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name FeS_long_SufT;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR03406 evalue:8.1e-71 score:236.5 best_domain_score:236.3 name:TIGR03406;
34258 34986 CDS
ID metaerg.pl|12523
allgo_ids GO:0016021; GO:0005886; GO:0042493;
allko_ids K03748;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000005.1_56 1 233 evalue:8.0e-111 qcov:96.30 identity:85.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF02698;
pfam_desc DUF218 domain;
pfam_id DUF218;
pfam_target db:Pfam-A.hmm|PF02698.17 evalue:2.2e-17 score:62.5 best_domain_score:62.1 name:DUF218;
sprot_desc hypothetical protein;
sprot_id sp|P45130|SANA_HAEIN;
sprot_target db:uniprot_sprot|sp|P45130|SANA_HAEIN 10 218 evalue:3.7e-30 qcov:86.40 identity:39.20;
tm_num 1;
34258 34986 transmembrane_helix
ID metaerg.pl|12524
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i34291-34359o;
35459 35013 CDS
ID metaerg.pl|12525
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002366715;
genomedb_acc GCA_002366715.1;
genomedb_target db:genomedb|GCA_002366715.1|DFBS01000046.1_41 1 148 evalue:1.4e-76 qcov:100.00 identity:99.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
36456 35548 CDS
ID metaerg.pl|12526
allec_ids 6.3.2.-;
allgo_ids GO:0005524; GO:0046872; GO:0016881; GO:0006464; GO:0006412;
allko_ids K05844;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002366715;
genomedb_acc GCA_002366715.1;
genomedb_target db:genomedb|GCA_002366715.1|DFBS01000046.1_40 1 302 evalue:5.4e-165 qcov:100.00 identity:99.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id PWY-6455;
metacyc_pathway_name vancomycin resistance II;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Vancomycin-Resistnace;;
pfam_acc PF02655; PF14397; PF07478; PF02955; PF08443; PF18030;
pfam_desc ATP-grasp domain; Sugar-transfer associated ATP-grasp; D-ala D-ala ligase C-terminus; Prokaryotic glutathione synthetase, ATP-grasp domain; RimK-like ATP-grasp domain; RimK PreATP-grasp domain;
pfam_id ATP-grasp_3; ATPgrasp_ST; Dala_Dala_lig_C; GSH-S_ATP; RimK; Rimk_N;
pfam_target db:Pfam-A.hmm|PF02655.14 evalue:4.2e-10 score:39.1 best_domain_score:38.4 name:ATP-grasp_3; db:Pfam-A.hmm|PF14397.6 evalue:1e-08 score:34.0 best_domain_score:19.1 name:ATPgrasp_ST; db:Pfam-A.hmm|PF07478.13 evalue:2e-05 score:23.4 best_domain_score:20.9 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF02955.16 evalue:9.1e-18 score:63.5 best_domain_score:62.9 name:GSH-S_ATP; db:Pfam-A.hmm|PF08443.11 evalue:1.9e-68 score:229.0 best_domain_score:228.6 name:RimK; db:Pfam-A.hmm|PF18030.1 evalue:2.2e-44 score:149.0 best_domain_score:147.9 name:Rimk_N;
sprot_desc Probable alpha-L-glutamate ligase;
sprot_id sp|Q1QY63|RIMK_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QY63|RIMK_CHRSD 1 302 evalue:4.6e-155 qcov:100.00 identity:91.40;
tigrfam_acc TIGR00768;
tigrfam_desc alpha-L-glutamate ligase, RimK family;
tigrfam_name rimK_fam;
tigrfam_target db:TIGRFAMs.hmm|TIGR00768 evalue:2.3e-83 score:278.9 best_domain_score:278.7 name:TIGR00768;
36938 36498 CDS
ID metaerg.pl|12527
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_008957021.1 1 146 evalue:4.9e-79 qcov:100.00 identity:97.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF05618;
pfam_desc Putative ATP-dependant zinc protease;
pfam_id Zn_protease;
pfam_target db:Pfam-A.hmm|PF05618.11 evalue:9.1e-27 score:92.8 best_domain_score:92.7 name:Zn_protease;
38012 36975 CDS
ID metaerg.pl|12528
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113107.1 1 345 evalue:7.3e-166 qcov:100.00 identity:82.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF12069;
pfam_desc Protein of unknown function (DUF3549);
pfam_id DUF3549;
pfam_target db:Pfam-A.hmm|PF12069.8 evalue:3.7e-97 score:324.6 best_domain_score:324.5 name:DUF3549;
38327 38659 CDS
ID metaerg.pl|12529
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF59961.1 1 110 evalue:1.3e-47 qcov:100.00 identity:90.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF04287;
pfam_desc tRNA pseudouridine synthase C;
pfam_id DUF446;
pfam_target db:Pfam-A.hmm|PF04287.12 evalue:4.5e-29 score:99.6 best_domain_score:99.5 name:DUF446;
39410 38784 CDS
ID metaerg.pl|12530
allgo_ids GO:0019867; GO:0009279; GO:0016021;
allko_ids K07275;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113105.1 1 208 evalue:1.8e-103 qcov:100.00 identity:91.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF03922; PF13505;
pfam_desc OmpW family; Outer membrane protein beta-barrel domain;
pfam_id OmpW; OMP_b-brl;
pfam_target db:Pfam-A.hmm|PF03922.14 evalue:4.6e-49 score:166.1 best_domain_score:165.9 name:OmpW; db:Pfam-A.hmm|PF13505.6 evalue:1.4e-14 score:53.8 best_domain_score:53.5 name:OMP_b-brl;
sp YES;
sprot_desc Outer membrane protein W;
sprot_id sp|P0A915|OMPW_ECOLI;
sprot_target db:uniprot_sprot|sp|P0A915|OMPW_ECOLI 25 208 evalue:1.3e-36 qcov:88.50 identity:45.90;
tigrfam_acc TIGR03304;
tigrfam_desc outer membrane insertion C-terminal signal;
tigrfam_name OMP85_target;
tigrfam_target db:TIGRFAMs.hmm|TIGR03304 evalue:0.24 score:11.0 best_domain_score:8.7 name:TIGR03304;
tm_num 1;
38784 38864 signal_peptide
ID metaerg.pl|12531
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
39410 38784 transmembrane_helix
ID metaerg.pl|12532
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i38796-38864o;
43367 39702 CDS
ID metaerg.pl|12533
allec_ids 1.5.5.2; 1.2.1.88;
allgo_ids GO:0016491; GO:0055114; GO:0009898; GO:0003842; GO:0000986; GO:0003677; GO:0001217; GO:0050660; GO:0042802; GO:0016620; GO:0004657; GO:0043565; GO:0006561; GO:0010133;
allko_ids K00294; K00318; K13821;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233241.1 5 1221 evalue:0.0e+00 qcov:99.70 identity:96.40;
kegg_pathway_id 00330; 00251;
kegg_pathway_name Arginine and proline metabolism; Glutamate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF00171; PF18327; PF01619; PF14850;
pfam_desc Aldehyde dehydrogenase family; Proline utilization A proline dehydrogenase N-terminal domain ; Proline dehydrogenase; DNA-binding domain of Proline dehydrogenase;
pfam_id Aldedh; PRODH; Pro_dh; Pro_dh-DNA_bdg;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:1.5e-114 score:382.3 best_domain_score:377.7 name:Aldedh; db:Pfam-A.hmm|PF18327.1 evalue:7.2e-08 score:31.8 best_domain_score:28.4 name:PRODH; db:Pfam-A.hmm|PF01619.18 evalue:1.2e-99 score:332.9 best_domain_score:332.3 name:Pro_dh; db:Pfam-A.hmm|PF14850.6 evalue:6.6e-44 score:148.2 best_domain_score:147.0 name:Pro_dh-DNA_bdg;
sprot_desc Bifunctional protein PutA;
sprot_id sp|P09546|PUTA_ECOLI;
sprot_target db:uniprot_sprot|sp|P09546|PUTA_ECOLI 16 1217 evalue:1.6e-278 qcov:98.40 identity:46.00;
tigrfam_acc TIGR01238;
tigrfam_desc delta-1-pyrroline-5-carboxylate dehydrogenase;
tigrfam_mainrole Energy metabolism;
tigrfam_name D1pyr5carbox3;
tigrfam_sub1role Amino acids and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01238 evalue:1e-194 score:646.9 best_domain_score:644.0 name:TIGR01238;
45005 43512 CDS
ID metaerg.pl|12534
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0005298; GO:0031402; GO:0015824;
allko_ids K03307;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035580246.1 1 496 evalue:2.2e-264 qcov:99.80 identity:96.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF00474;
pfam_desc Sodium:solute symporter family;
pfam_id SSF;
pfam_target db:Pfam-A.hmm|PF00474.17 evalue:9.4e-93 score:310.5 best_domain_score:309.7 name:SSF;
sprot_desc Osmoregulated proline transporter OpuE;
sprot_id sp|O06493|OPUE_BACSU;
sprot_target db:uniprot_sprot|sp|O06493|OPUE_BACSU 1 485 evalue:1.1e-126 qcov:97.60 identity:51.20;
tigrfam_acc TIGR00813; TIGR02121;
tigrfam_desc transporter, solute:sodium symporter (SSS) family; sodium/proline symporter;
tigrfam_mainrole Transport and binding proteins; Transport and binding proteins;
tigrfam_name sss; Na_Pro_sym;
tigrfam_sub1role Cations and iron carrying compounds; Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00813 evalue:2.3e-77 score:260.0 best_domain_score:259.2 name:TIGR00813; db:TIGRFAMs.hmm|TIGR02121 evalue:2.4e-184 score:612.8 best_domain_score:612.5 name:TIGR02121;
tm_num 12;
45005 43512 transmembrane_helix
ID metaerg.pl|12535
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i43515-43583o43704-43772i43887-43955o44013-44081i44118-44186o44214-44282i44343-44411o44511-44579i44640-44696o44724-44792i44811-44870o44898-44966i;
46496 45663 CDS
ID metaerg.pl|12536
allgo_ids GO:0003700; GO:0006355; GO:0043565;
allko_ids K01247; K13530; K10778; K13529; K00567;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF59968.1 1 277 evalue:2.9e-141 qcov:100.00 identity:91.30;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF12833; PF00165;
pfam_desc Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF12833.7 evalue:1.1e-22 score:79.3 best_domain_score:79.3 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:8.2e-21 score:72.8 best_domain_score:39.3 name:HTH_AraC;
46965 46603 CDS
ID metaerg.pl|12537
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_008957014.1 1 119 evalue:3.1e-55 qcov:99.20 identity:93.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
tm_num 1;
46965 46603 transmembrane_helix
ID metaerg.pl|12538
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology o46612-46680i;
47646 47239 CDS
ID metaerg.pl|12539
allec_ids 2.7.7.-;
allgo_ids GO:0016779; GO:0003723; GO:0006396;
allko_ids K01697; K11527; K02000; K00088; K00641; K05847; K02806; K00974; K00970;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002366715;
genomedb_acc GCA_002366715.1;
genomedb_target db:genomedb|GCA_002366715.1|DFBS01000046.1_30 1 135 evalue:1.5e-61 qcov:100.00 identity:91.10;
kegg_pathway_id 00450; 02060; 02010; 00260; 00230; 00271; 00920; 00983;
kegg_pathway_name Selenoamino acid metabolism; Phosphotransferase system (PTS); ABC transporters - General; Glycine, serine and threonine metabolism; Purine metabolism; Methionine metabolism; Sulfur metabolism; Drug metabolism - other enzymes;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id PWY4FS-4; PHOSLIPSYN2-PWY; PWY-6476; PWY-5354; THISYN-PWY; PWY-882;
metacyc_pathway_name phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; cytidylyl molybdenum cofactor biosynthesis;; ; superpathway of thiamine diphosphate biosynthesis I;; L-ascorbate biosynthesis I (L-galactose pathway);;
metacyc_pathway_type PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Cofactor-Biosynthesis;; ; Super-Pathways; Thiamine-Biosynthesis;; Ascorbate-Biosynthesis;;
pfam_acc PF00571;
pfam_desc CBS domain;
pfam_id CBS;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:4e-22 score:77.7 best_domain_score:45.2 name:CBS;
sprot_desc A-adding tRNA nucleotidyltransferase;
sprot_id sp|P74081|AATNT_SYNY3;
sprot_target db:uniprot_sprot|sp|P74081|AATNT_SYNY3 6 130 evalue:3.6e-06 qcov:92.60 identity:30.20;
47883 48416 CDS
ID metaerg.pl|12540
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113088.1 1 177 evalue:1.2e-68 qcov:100.00 identity:75.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF01679;
pfam_desc Proteolipid membrane potential modulator;
pfam_id Pmp3;
pfam_target db:Pfam-A.hmm|PF01679.17 evalue:1.8e-12 score:46.5 best_domain_score:45.9 name:Pmp3;
tm_num 1;
47883 48416 transmembrane_helix
ID metaerg.pl|12541
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology o48336-48404i;
48505 49383 CDS
ID metaerg.pl|12542
allgo_ids GO:0016020; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis_A;
genomedb_acc GCF_002211105.1;
genomedb_target db:genomedb|GCF_002211105.1|WP_088700501.1 1 287 evalue:9.3e-154 qcov:98.30 identity:97.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:3.9e-10 score:39.3 best_domain_score:24.5 name:EamA;
sprot_desc Biotin transporter;
sprot_id sp|P0ADP6|BIOP_ECO57;
sprot_target db:uniprot_sprot|sp|P0ADP6|BIOP_ECO57 1 286 evalue:7.3e-73 qcov:97.90 identity:52.30;
tigrfam_acc TIGR00950;
tigrfam_desc carboxylate/amino acid/amine transporter;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 2A78;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR00950 evalue:4.1e-74 score:248.5 best_domain_score:248.3 name:TIGR00950;
tm_num 9;
48505 49383 transmembrane_helix
ID metaerg.pl|12543
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i48508-48576o48589-48657i48739-48807o48817-48885i48904-48972o49030-49098i49117-49185o49198-49266i49291-49344o;
49458 50390 CDS
ID metaerg.pl|12544
allec_ids 2.7.1.23;
allgo_ids GO:0003951; GO:0006741; GO:0005737; GO:0005524; GO:0046872; GO:0019674;
allko_ids K00858;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ87936.1 1 310 evalue:1.0e-163 qcov:100.00 identity:93.90;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id PWY-5083; NADPHOS-DEPHOS-PWY;
metacyc_pathway_name NAD/NADH phosphorylation and dephosphorylation;; NAD phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; NAD-Metabolism;;
pfam_acc PF01513;
pfam_desc ATP-NAD kinase;
pfam_id NAD_kinase;
pfam_target db:Pfam-A.hmm|PF01513.21 evalue:3.1e-60 score:203.1 best_domain_score:202.5 name:NAD_kinase;
sprot_desc NAD kinase;
sprot_id sp|Q1QXZ6|NADK_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QXZ6|NADK_CHRSD 19 310 evalue:6.9e-122 qcov:94.20 identity:70.20;
50393 51379 CDS
ID metaerg.pl|12545
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000005.1_37 1 328 evalue:4.9e-188 qcov:100.00 identity:93.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:7.4e-09 score:35.6 best_domain_score:34.8 name:Metallophos;
51619 52470 CDS
ID metaerg.pl|12546
allec_ids 3.4.21.105;
allgo_ids GO:0004252; GO:0016021; GO:0005886;
allko_ids K02441;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_040480626.1 1 283 evalue:1.2e-137 qcov:100.00 identity:87.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF16733; PF01694;
pfam_desc Rhomboid N-terminal domain; Rhomboid family;
pfam_id NRho; Rhomboid;
pfam_target db:Pfam-A.hmm|PF16733.5 evalue:6.6e-14 score:51.0 best_domain_score:50.1 name:NRho; db:Pfam-A.hmm|PF01694.22 evalue:1.3e-31 score:108.8 best_domain_score:108.8 name:Rhomboid;
sprot_desc Rhomboid protease GlpG;
sprot_id sp|A7FNW6|GLPG_YERP3;
sprot_target db:uniprot_sprot|sp|A7FNW6|GLPG_YERP3 29 274 evalue:8.5e-26 qcov:86.90 identity:30.40;
tm_num 7;
51619 52470 transmembrane_helix
ID metaerg.pl|12547
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology o51859-51927i51940-52008o52051-52110i52147-52200o52210-52266i52285-52353o52396-52449i;
52481 52765 CDS
ID metaerg.pl|12548
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008957007.1 1 94 evalue:1.5e-41 qcov:100.00 identity:93.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF07023;
pfam_desc Protein of unknown function (DUF1315);
pfam_id DUF1315;
pfam_target db:Pfam-A.hmm|PF07023.12 evalue:2.3e-23 score:81.3 best_domain_score:81.1 name:DUF1315;
52758 53594 CDS
ID metaerg.pl|12549
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI65746.1 3 278 evalue:1.8e-146 qcov:99.30 identity:88.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF10977;
pfam_desc Protein of unknown function (DUF2797);
pfam_id DUF2797;
pfam_target db:Pfam-A.hmm|PF10977.8 evalue:1.5e-96 score:322.0 best_domain_score:321.8 name:DUF2797;
53673 54098 CDS
ID metaerg.pl|12550
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113080.1 1 141 evalue:7.8e-66 qcov:100.00 identity:90.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF03653;
pfam_desc Uncharacterised protein family (UPF0093);
pfam_id UPF0093;
pfam_target db:Pfam-A.hmm|PF03653.13 evalue:9.6e-15 score:54.3 best_domain_score:54.0 name:UPF0093;
tm_num 4;
53673 54098 transmembrane_helix
ID metaerg.pl|12551
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i53691-53759o53817-53885i53904-53972o54015-54074i;
54571 54110 CDS
ID metaerg.pl|12552
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002966495;
genomedb_acc GCF_002966495.1;
genomedb_target db:genomedb|GCF_002966495.1|WP_009099596.1 1 152 evalue:3.9e-71 qcov:99.30 identity:88.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF09990;
pfam_desc Predicted membrane protein (DUF2231);
pfam_id DUF2231;
pfam_target db:Pfam-A.hmm|PF09990.9 evalue:4.6e-24 score:84.1 best_domain_score:84.1 name:DUF2231;
tm_num 4;
54571 54110 transmembrane_helix
ID metaerg.pl|12553
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i54167-54235o54278-54346i54371-54439o54452-54520i;
54608 55678 CDS
ID metaerg.pl|12554
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0005507; GO:0016020; GO:0016021; GO:0005886; GO:0070469; GO:0020037;
allko_ids K00376; K02275;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693582.1 12 356 evalue:1.4e-167 qcov:96.90 identity:82.90;
kegg_pathway_id 00910; 00190;
kegg_pathway_name Nitrogen metabolism; Oxidative phosphorylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metabolic_acc TIGR02866;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, caa3-type;gene:CoxB;;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00116; PF00034;
pfam_desc Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c;
pfam_id COX2; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF00116.20 evalue:2.2e-23 score:81.6 best_domain_score:72.3 name:COX2; db:Pfam-A.hmm|PF00034.21 evalue:2.6e-07 score:30.9 best_domain_score:29.4 name:Cytochrom_C;
sp YES;
sprot_desc Cytochrome c oxidase subunit 2;
sprot_id sp|Q04441|COX2_BACPE;
sprot_target db:uniprot_sprot|sp|Q04441|COX2_BACPE 34 354 evalue:3.9e-44 qcov:90.20 identity:33.80;
tigrfam_acc TIGR02866;
tigrfam_desc cytochrome c oxidase, subunit II;
tigrfam_mainrole Energy metabolism;
tigrfam_name CoxB;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02866 evalue:3.6e-54 score:182.5 best_domain_score:182.1 name:TIGR02866;
tm_num 3;
54608 54724 lipoprotein_signal_peptide
ID metaerg.pl|12555
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
54608 55678 transmembrane_helix
ID metaerg.pl|12556
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i54671-54724o54782-54850i54911-54979o;
55675 58218 CDS
ID metaerg.pl|12557
allec_ids 1.9.3.1;
allgo_ids GO:0004129; GO:0009060; GO:0016021; GO:0020037; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693581.1 1 847 evalue:0.0e+00 qcov:100.00 identity:91.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metabolic_acc TIGR02891;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, caa3-type;gene:CoxA;;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00115;
pfam_desc Cytochrome C and Quinol oxidase polypeptide I;
pfam_id COX1;
pfam_target db:Pfam-A.hmm|PF00115.20 evalue:2.6e-141 score:470.6 best_domain_score:470.6 name:COX1;
tigrfam_acc TIGR02891;
tigrfam_desc cytochrome c oxidase, subunit I;
tigrfam_mainrole Energy metabolism;
tigrfam_name CtaD_CoxA;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR02891 evalue:1.2e-211 score:702.9 best_domain_score:702.9 name:TIGR02891;
tm_num 19;
55675 58218 transmembrane_helix
ID metaerg.pl|12558
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i55813-55881o55939-56007i56065-56133o56206-56274i56311-56379o56494-56553i56572-56640o56683-56751i56785-56853o56896-56964i56998-57066o57124-57192i57451-57519o57532-57585i57676-57744o57787-57855i57892-57960o58003-58071i58141-58209o;
58223 58579 CDS
ID metaerg.pl|12559
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_083570976.1 1 118 evalue:2.0e-51 qcov:100.00 identity:86.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
tm_num 3;
58223 58579 transmembrane_helix
ID metaerg.pl|12560
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i58256-58324o58367-58435i58496-58564o;
58627 60780 CDS
ID metaerg.pl|12561
allec_ids 7.2.2.8; 3.6.3.-;
allgo_ids GO:0030001; GO:0046872; GO:0005737; GO:0016021; GO:0005886; GO:0005524; GO:0019829; GO:0006825;
allko_ids K17686;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233567.1 1 715 evalue:0.0e+00 qcov:99.70 identity:83.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id PWY-6166; PWY-6188; PWY-6171; PWY-6135; PWY-6113; PWYG-321;
metacyc_pathway_name ; ; ; ; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF00122; PF00403; PF00702;
pfam_desc E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase;
pfam_id E1-E2_ATPase; HMA; Hydrolase;
pfam_target db:Pfam-A.hmm|PF00122.20 evalue:5.2e-35 score:119.8 best_domain_score:119.8 name:E1-E2_ATPase; db:Pfam-A.hmm|PF00403.26 evalue:2.7e-07 score:30.2 best_domain_score:28.7 name:HMA; db:Pfam-A.hmm|PF00702.26 evalue:1.2e-20 score:73.9 best_domain_score:73.3 name:Hydrolase;
sprot_desc Copper-exporting P-type ATPase;
sprot_id sp|Q8Z8S4|COPA_SALTI;
sprot_target db:uniprot_sprot|sp|Q8Z8S4|COPA_SALTI 1 708 evalue:9.9e-71 qcov:98.70 identity:30.60;
tigrfam_acc TIGR01494; TIGR01525;
tigrfam_desc HAD ATPase, P-type, family IC; heavy metal translocating P-type ATPase;
tigrfam_name ATPase_P-type; ATPase-IB_hvy;
tigrfam_target db:TIGRFAMs.hmm|TIGR01494 evalue:1.6e-49 score:167.8 best_domain_score:160.2 name:TIGR01494; db:TIGRFAMs.hmm|TIGR01525 evalue:1.8e-116 score:389.4 best_domain_score:389.1 name:TIGR01525;
tm_num 8;
58627 60780 transmembrane_helix
ID metaerg.pl|12562
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i58867-58935o58963-59031i59068-59127o59140-59196i59605-59673o59701-59769i60622-60681o60691-60759i;
61089 60787 CDS
ID metaerg.pl|12563
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI65741.1 5 100 evalue:2.7e-44 qcov:96.00 identity:91.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF09904;
pfam_desc Winged helix-turn helix;
pfam_id HTH_43;
pfam_target db:Pfam-A.hmm|PF09904.9 evalue:1.4e-40 score:136.4 best_domain_score:136.2 name:HTH_43;
61182 62021 CDS
ID metaerg.pl|12564
allgo_ids GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078088021.1 15 273 evalue:5.7e-84 qcov:92.80 identity:63.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF00196;
pfam_desc Bacterial regulatory proteins, luxR family;
pfam_id GerE;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:1e-13 score:49.9 best_domain_score:49.1 name:GerE;
62108 63391 CDS
ID metaerg.pl|12565
allec_ids 6.1.1.1;
allgo_ids GO:0003723; GO:0005737; GO:0005524; GO:0004831; GO:0006437;
allko_ids K01866;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078088020.1 10 427 evalue:5.4e-203 qcov:97.90 identity:82.80;
kegg_pathway_id 00400; 00970;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF01479; PF00579;
pfam_desc S4 domain; tRNA synthetases class I (W and Y);
pfam_id S4; tRNA-synt_1b;
pfam_target db:Pfam-A.hmm|PF01479.25 evalue:1.5e-06 score:27.1 best_domain_score:26.2 name:S4; db:Pfam-A.hmm|PF00579.25 evalue:1.9e-79 score:266.2 best_domain_score:265.9 name:tRNA-synt_1b;
sprot_desc Tyrosine--tRNA ligase 1;
sprot_id sp|Q87J85|SYY1_VIBPA;
sprot_target db:uniprot_sprot|sp|Q87J85|SYY1_VIBPA 10 424 evalue:1.2e-169 qcov:97.20 identity:70.80;
tigrfam_acc TIGR00234;
tigrfam_desc tyrosine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name tyrS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00234 evalue:2.3e-117 score:391.7 best_domain_score:391.4 name:TIGR00234;
64497 63415 CDS
ID metaerg.pl|12566
allgo_ids GO:0003824; GO:0051536;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035557028.1 1 360 evalue:1.7e-197 qcov:100.00 identity:93.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF04055;
pfam_desc Radical SAM superfamily;
pfam_id Radical_SAM;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:4.6e-16 score:58.9 best_domain_score:57.6 name:Radical_SAM;
64671 65213 CDS
ID metaerg.pl|12567
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035557029.1 1 178 evalue:1.1e-77 qcov:98.90 identity:80.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF05163; PF12867;
pfam_desc DinB family; DinB superfamily;
pfam_id DinB; DinB_2;
pfam_target db:Pfam-A.hmm|PF05163.12 evalue:3.7e-35 score:120.6 best_domain_score:120.3 name:DinB; db:Pfam-A.hmm|PF12867.7 evalue:2.1e-09 score:37.2 best_domain_score:36.9 name:DinB_2;
65264 65719 CDS
ID metaerg.pl|12568
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064233259.1 1 148 evalue:1.6e-45 qcov:98.00 identity:68.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
tm_num 4;
65264 65719 transmembrane_helix
ID metaerg.pl|12569
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i65282-65350o65393-65461i65519-65587o65600-65668i;
65755 66381 CDS
ID metaerg.pl|12570
allgo_ids GO:0006865; GO:0016020; GO:0016021; GO:0005886; GO:0042970; GO:0042968;
allko_ids K05834;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_A;s__Halomonas_A anticariensis;
genomedb_acc GCF_000409775.1;
genomedb_target db:genomedb|GCF_000409775.1|WP_016415456.1 1 207 evalue:2.7e-91 qcov:99.50 identity:87.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF01810;
pfam_desc LysE type translocator;
pfam_id LysE;
pfam_target db:Pfam-A.hmm|PF01810.18 evalue:9.6e-30 score:102.7 best_domain_score:102.4 name:LysE;
sprot_desc Uncharacterized membrane protein VC_0136;
sprot_id sp|Q9KVK7|Y136_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KVK7|Y136_VIBCH 1 205 evalue:4.8e-18 qcov:98.60 identity:30.20;
tm_num 5;
65755 66381 transmembrane_helix
ID metaerg.pl|12571
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology o65782-65850i65911-65979o66091-66159i66196-66264o66307-66366i;
68253 66583 CDS
ID metaerg.pl|12572
allec_ids 5.3.1.9;
allgo_ids GO:0004347; GO:0006094; GO:0006096; GO:0005737;
allko_ids K01810;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008956995.1 1 556 evalue:0.0e+00 qcov:100.00 identity:95.30;
kegg_pathway_id 00010; 00030; 00500;
kegg_pathway_name Glycolysis / Gluconeogenesis; Pentose phosphate pathway; Starch and sucrose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id P124-PWY; GLUCONEO-PWY; GLYCOLYSIS; P122-PWY; PWY-6146; GLYCOLYSIS-E-D; ANAGLYCOLYSIS-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-3801; ANAEROFRUCAT-PWY; PWY-621; PWY-5384; PWY-5659; COLANSYN-PWY; P341-PWY; PWY-622; PWY-6142;
metacyc_pathway_name Bifidobacterium shunt;; gluconeogenesis I;; glycolysis I (from glucose 6-phosphate);; heterolactic fermentation;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of glycolysis and the Entner-Doudoroff pathway;; glycolysis III (from glucose);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; sucrose degradation II (sucrose synthase);; homolactic fermentation;; sucrose degradation III (sucrose invertase);; sucrose degradation IV (sucrose phosphorylase);; GDP-mannose biosynthesis;; colanic acid building blocks biosynthesis;; glycolysis V (Pyrococcus);; starch biosynthesis;; gluconeogenesis II (Methanobacterium thermoautotrophicum);;
metacyc_pathway_type Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Gluconeogenesis;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; SUCROSE-DEG;; Fermentation-to-Lactate; Super-Pathways;; SUCROSE-DEG;; SUCROSE-DEG;; GDP-Sugar-Biosynthesis;; Carbohydrates-Biosynthesis; Super-Pathways;; GLYCOLYSIS-VARIANTS;; GLYCOGEN-BIOSYN;; Gluconeogenesis; Super-Pathways;;
pfam_acc PF00342;
pfam_desc Phosphoglucose isomerase;
pfam_id PGI;
pfam_target db:Pfam-A.hmm|PF00342.19 evalue:4.4e-204 score:677.8 best_domain_score:677.6 name:PGI;
sprot_desc Glucose-6-phosphate isomerase 1;
sprot_id sp|Q1QZ19|G6PI1_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QZ19|G6PI1_CHRSD 1 550 evalue:7.9e-286 qcov:98.90 identity:88.00;
70183 68447 CDS
ID metaerg.pl|12573
allec_ids 2.7.1.202; 2.7.1.69;
allgo_ids GO:0008982; GO:0009401; GO:0016020; GO:0016021; GO:0005886; GO:0005351; GO:0016301; GO:0022877; GO:0090582;
allko_ids K02760; K02770; K11202; K02768; K02787; K02806; K02774; K02788; K02769; K02793; K11200; K11198; K11199; K02795; K11203; K02794; K11201;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas nigrificans;
genomedb_acc GCF_002374315.1;
genomedb_target db:genomedb|GCF_002374315.1|WP_096651465.1 1 578 evalue:9.7e-288 qcov:100.00 identity:93.30;
kegg_pathway_id 02060;
kegg_pathway_name Phosphotransferase system (PTS);
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF02378; PF02302;
pfam_desc Phosphotransferase system, EIIC ; PTS system, Lactose/Cellobiose specific IIB subunit;
pfam_id PTS_EIIC; PTS_IIB;
pfam_target db:Pfam-A.hmm|PF02378.18 evalue:4.5e-17 score:61.3 best_domain_score:61.3 name:PTS_EIIC; db:Pfam-A.hmm|PF02302.17 evalue:1.2e-35 score:121.3 best_domain_score:63.8 name:PTS_IIB;
sprot_desc PTS system fructose-specific EIIB'BC component;
sprot_id sp|P20966|PTFBC_ECOLI;
sprot_target db:uniprot_sprot|sp|P20966|PTFBC_ECOLI 1 569 evalue:1.8e-147 qcov:98.40 identity:59.30;
tigrfam_acc TIGR00829; TIGR01427;
tigrfam_desc PTS system, Fru family, IIB component; PTS system, Fru family, IIC component;
tigrfam_mainrole Signal transduction;
tigrfam_name FRU; PTS_IIC_fructo;
tigrfam_sub1role PTS;
tigrfam_target db:TIGRFAMs.hmm|TIGR00829 evalue:3.6e-58 score:193.0 best_domain_score:122.9 name:TIGR00829; db:TIGRFAMs.hmm|TIGR01427 evalue:4e-143 score:476.1 best_domain_score:475.7 name:TIGR01427;
tm_num 8;
70183 68447 transmembrane_helix
ID metaerg.pl|12574
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
topology i69188-69256o69299-69367i69428-69496o69539-69598i69659-69718o69776-69844i69968-70036o70079-70147i;
71175 70180 CDS
ID metaerg.pl|12575
allec_ids 2.7.1.56; 2.7.1.-;
allgo_ids GO:0008662; GO:0005524;
allko_ids K00882;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071693574.1 1 331 evalue:1.8e-153 qcov:100.00 identity:84.00;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id PWY-5107; PLPSAL-PWY; PWY0-1314; PWY-6577; PWY0-1261; LIPA-CORESYN-PWY; P1-PWY; PWY-5381; PWY0-163; LPSSYN-PWY; PWY0-845;
metacyc_pathway_name phytol salvage pathway;; pyridoxal 5'-phosphate salvage I;; fructose degradation;; farnesylcysteine salvage pathway;; anhydromuropeptides recycling I;; lipid A-core biosynthesis (E. coli K-12);; ; pyridine nucleotide cycling (plants);; ; superpathway of lipopolysaccharide biosynthesis;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;;
metacyc_pathway_type DITERPENOID-SYN;; Vitamin-B6-Biosynthesis;; Sugars-And-Polysaccharides-Degradation;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Anhydromuropeptides-Recycling;; Glycan-Biosynthesis; Lipid-Biosynthesis;; ; NAD-Metabolism;; ; Lipid-Biosynthesis; Super-Pathways;; Super-Pathways; Vitamin-B6-Biosynthesis;;
pfam_acc PF00294;
pfam_desc pfkB family carbohydrate kinase;
pfam_id PfkB;
pfam_target db:Pfam-A.hmm|PF00294.24 evalue:7.2e-43 score:146.2 best_domain_score:146.0 name:PfkB;
sprot_desc 1-phosphofructokinase;
sprot_id sp|P0AEX1|K1PF_ECO57;
sprot_target db:uniprot_sprot|sp|P0AEX1|K1PF_ECO57 3 302 evalue:1.4e-48 qcov:90.60 identity:40.30;
tigrfam_acc TIGR03168; TIGR03828;
tigrfam_desc hexose kinase, 1-phosphofructokinase family; 1-phosphofructokinase;
tigrfam_name 1-PFK; pfkB;
tigrfam_target db:TIGRFAMs.hmm|TIGR03168 evalue:2.7e-89 score:298.2 best_domain_score:298.0 name:TIGR03168; db:TIGRFAMs.hmm|TIGR03828 evalue:1.7e-88 score:295.7 best_domain_score:295.5 name:TIGR03828;
74069 71175 CDS
ID metaerg.pl|12576
allec_ids 2.7.3.9;
allgo_ids GO:0009401; GO:0005737; GO:0016301; GO:0046872; GO:0008965;
allko_ids K02773; K11189; K11203; K02794; K02798; K11201; K02793; K11183; K11200; K01007; K05881; K02744; K11198; K02795; K11199; K02821; K02806; K02812; K02799; K00873; K08483; K01006; K02769; K02800; K08484; K11202; K02770; K02768;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF59991.1 1 964 evalue:0.0e+00 qcov:100.00 identity:88.50;
kegg_pathway_id 00230; 00620; 02060; 00720; 00010; 00710;
kegg_pathway_name Purine metabolism; Pyruvate metabolism; Phosphotransferase system (PTS); Reductive carboxylate cycle (CO2 fixation); Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF05524; PF00391; PF02896; PF00381; PF00359;
pfam_desc PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PTS HPr component phosphorylation site; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2;
pfam_id PEP-utilisers_N; PEP-utilizers; PEP-utilizers_C; PTS-HPr; PTS_EIIA_2;
pfam_target db:Pfam-A.hmm|PF05524.13 evalue:1e-21 score:76.5 best_domain_score:76.5 name:PEP-utilisers_N; db:Pfam-A.hmm|PF00391.23 evalue:1.1e-21 score:75.5 best_domain_score:74.1 name:PEP-utilizers; db:Pfam-A.hmm|PF02896.18 evalue:2.6e-100 score:334.5 best_domain_score:333.9 name:PEP-utilizers_C; db:Pfam-A.hmm|PF00381.19 evalue:2.6e-19 score:68.5 best_domain_score:67.2 name:PTS-HPr; db:Pfam-A.hmm|PF00359.22 evalue:3.3e-35 score:120.3 best_domain_score:104.4 name:PTS_EIIA_2;
sprot_desc Multiphosphoryl transfer protein;
sprot_id sp|P45597|PTFAX_XANCP;
sprot_target db:uniprot_sprot|sp|P45597|PTFAX_XANCP 139 964 evalue:1.1e-120 qcov:85.70 identity:36.60;
tigrfam_acc TIGR01003; TIGR01417;
tigrfam_desc phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase;
tigrfam_mainrole Signal transduction;
tigrfam_name PTS_HPr_family; PTS_I_fam;
tigrfam_sub1role PTS;
tigrfam_target db:TIGRFAMs.hmm|TIGR01003 evalue:1.2e-15 score:56.4 best_domain_score:52.7 name:TIGR01003; db:TIGRFAMs.hmm|TIGR01417 evalue:3.7e-143 score:477.1 best_domain_score:476.8 name:TIGR01417;
74369 75346 CDS
ID metaerg.pl|12577
allgo_ids GO:0003677; GO:0006355; GO:0009750;
allko_ids K03435;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035580185.1 1 325 evalue:2.7e-162 qcov:100.00 identity:90.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF00356; PF00532;
pfam_desc Bacterial regulatory proteins, lacI family; Periplasmic binding proteins and sugar binding domain of LacI family;
pfam_id LacI; Peripla_BP_1;
pfam_target db:Pfam-A.hmm|PF00356.21 evalue:4.7e-16 score:57.6 best_domain_score:57.1 name:LacI; db:Pfam-A.hmm|PF00532.21 evalue:8.8e-13 score:47.5 best_domain_score:47.2 name:Peripla_BP_1;
sprot_desc Catabolite repressor/activator;
sprot_id sp|P0A2P9|CRA_SALTI;
sprot_target db:uniprot_sprot|sp|P0A2P9|CRA_SALTI 1 308 evalue:3.4e-63 qcov:94.80 identity:44.30;
75832 75356 CDS
ID metaerg.pl|12578
allec_ids 4.2.3.3;
allgo_ids GO:0008929; GO:0019242;
allko_ids K01734;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI65730.1 1 157 evalue:9.6e-81 qcov:99.40 identity:94.30;
kegg_pathway_id 00620;
kegg_pathway_name Pyruvate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
pfam_acc PF02142;
pfam_desc MGS-like domain;
pfam_id MGS;
pfam_target db:Pfam-A.hmm|PF02142.22 evalue:5e-16 score:57.9 best_domain_score:57.5 name:MGS;
sprot_desc Methylglyoxal synthase;
sprot_id sp|Q21L65|MGSA_SACD2;
sprot_target db:uniprot_sprot|sp|Q21L65|MGSA_SACD2 14 157 evalue:3.7e-47 qcov:91.10 identity:60.40;
tigrfam_acc TIGR00160;
tigrfam_desc methylglyoxal synthase;
tigrfam_mainrole Energy metabolism;
tigrfam_name MGSA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00160 evalue:1.5e-53 score:179.8 best_domain_score:179.4 name:TIGR00160;
76036 77025 CDS
ID metaerg.pl|12579
allec_ids 1.2.1.12; 1.2.1.-;
allgo_ids GO:0016620; GO:0055114; GO:0005829; GO:0004365; GO:0051287; GO:0050661; GO:0006006; GO:0006096;
allko_ids K00134; K10705;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000005.1_15 1 330 evalue:2.9e-180 qcov:100.00 identity:97.90;
kegg_pathway_id 00010;
kegg_pathway_name Glycolysis / Gluconeogenesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0726; ; 0.00762267; 22.0802; ;
metacyc_pathway_id ANAEROFRUCAT-PWY; PWY-1042; PWY-3801; P441-PWY; PWY-5482; GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAGLYCOLYSIS-PWY; PWY-5464; P461-PWY; PWY-5484; PWY-5195; 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY; GLUCONEO-PWY; PWY-5537; P185-PWY; P124-PWY; TOLSULFDEG-PWY; PWY-321; P41-PWY; P105-PWY; PWY-5305; PWY-6537; GLYCOLYSIS-E-D; P122-PWY; 4TOLCARBDEG-PWY; GLYCOLYSIS; ANARESP1-PWY;
metacyc_pathway_name homolactic fermentation;; glycolysis IV (plant cytosol);; sucrose degradation II (sucrose synthase);; superpathway of N-acetylneuraminate degradation;; pyruvate fermentation to acetate II;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; artemisinin and arteannuin B biosynthesis;; 4-hydroxyphenylacetate degradation;; gluconeogenesis I;; pyruvate fermentation to acetate V;; formaldehyde assimilation III (dihydroxyacetone cycle);; Bifidobacterium shunt;; 4-toluenesulfonate degradation I;; cutin biosynthesis;; pyruvate fermentation to acetate and (S)-lactate I;; TCA cycle IV (2-oxoglutarate decarboxylase);; bixin biosynthesis;; 4-aminobutanoate degradation II;; superpathway of glycolysis and the Entner-Doudoroff pathway;; heterolactic fermentation;; 4-toluenecarboxylate degradation;; glycolysis I (from glucose 6-phosphate);; ;
metacyc_pathway_type Fermentation-to-Lactate; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SUCROSE-DEG;; CARBOXYLATES-DEG; Super-Pathways;; Pyruvate-Acetate-Fermentation;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; SESQUITERPENE-LACTONE;; AROMATIC-COMPOUNDS-DEGRADATION;; Gluconeogenesis;; Pyruvate-Acetate-Fermentation; Super-Pathways;; Formaldehyde-Assimilation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; 4-Toluenesulfonate-Degradation;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; Pyruvate-Acetate-Fermentation; Pyruvate-Lactate-Fermentation; Super-Pathways;; TCA-VARIANTS;; APOCAROTENOID-SYN;; 4-Aminobutyraye-Degradation;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; AROMATIC-COMPOUNDS-DEGRADATION;; GLYCOLYSIS-VARIANTS;; ;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:5.7e-58 score:194.2 best_domain_score:193.8 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:3.5e-37 score:126.0 best_domain_score:123.9 name:Gp_dh_N;
sprot_desc Glyceraldehyde-3-phosphate dehydrogenase;
sprot_id sp|P27726|G3P_PSEAE;
sprot_target db:uniprot_sprot|sp|P27726|G3P_PSEAE 1 329 evalue:1.5e-135 qcov:99.70 identity:71.10;
tigrfam_acc TIGR01534;
tigrfam_desc glyceraldehyde-3-phosphate dehydrogenase, type I;
tigrfam_mainrole Energy metabolism;
tigrfam_name GAPDH-I;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01534 evalue:3.9e-124 score:413.3 best_domain_score:413.1 name:TIGR01534;
>Feature NODE_98_length_76817_cov_14.5772
736 2 CDS
ID metaerg.pl|12580
allgo_ids GO:0016491; GO:0050660; GO:0055114; GO:0009339; GO:0071949; GO:0008891;
allko_ids K00075; K00104;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF60234.1 1 245 evalue:2.3e-129 qcov:100.00 identity:96.30;
kegg_pathway_id 00530; 00630;
kegg_pathway_name Aminosugars metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF01565;
pfam_desc FAD binding domain;
pfam_id FAD_binding_4;
pfam_target db:Pfam-A.hmm|PF01565.23 evalue:1.6e-36 score:124.3 best_domain_score:124.0 name:FAD_binding_4;
sprot_desc Glycolate oxidase subunit GlcD;
sprot_id sp|P0AEQ0|GLCD_ECOL6;
sprot_target db:uniprot_sprot|sp|P0AEQ0|GLCD_ECOL6 1 245 evalue:4.4e-95 qcov:100.00 identity:67.80;
959 1738 CDS
ID metaerg.pl|12581
allgo_ids GO:0003700; GO:0006355; GO:0003677;
allko_ids K00825; K11474;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000039.1_52 1 259 evalue:6.6e-119 qcov:100.00 identity:87.60;
kegg_pathway_id 00300; 00310;
kegg_pathway_name Lysine biosynthesis; Lysine degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:5.9e-25 score:87.3 best_domain_score:87.3 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:1.9e-17 score:61.9 best_domain_score:60.8 name:GntR;
sprot_desc Glc operon transcriptional activator;
sprot_id sp|P0ACL6|GLCC_ECOL6;
sprot_target db:uniprot_sprot|sp|P0ACL6|GLCC_ECOL6 16 256 evalue:6.3e-68 qcov:93.10 identity:57.30;
2448 1765 CDS
ID metaerg.pl|12582
allgo_ids GO:0003700; GO:0006355; GO:0043565;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035585400.1 1 226 evalue:6.2e-113 qcov:99.60 identity:92.00;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF07729; PF00392; PF13412;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family; Winged helix-turn-helix DNA-binding;
pfam_id FCD; GntR; HTH_24;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:8.4e-27 score:93.3 best_domain_score:92.4 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:1.5e-21 score:75.0 best_domain_score:73.3 name:GntR; db:Pfam-A.hmm|PF13412.6 evalue:3.9e-05 score:22.4 best_domain_score:19.7 name:HTH_24;
sprot_desc Uncharacterized HTH-type transcriptional regulator YdhC;
sprot_id sp|O05494|YDHC_BACSU;
sprot_target db:uniprot_sprot|sp|O05494|YDHC_BACSU 10 208 evalue:1.3e-16 qcov:87.70 identity:27.00;
2675 3136 CDS
ID metaerg.pl|12583
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035585398.1 1 152 evalue:1.6e-64 qcov:99.30 identity:85.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF03928;
pfam_desc Haem-degrading;
pfam_id Haem_degrading;
pfam_target db:Pfam-A.hmm|PF03928.14 evalue:1.8e-22 score:78.8 best_domain_score:78.6 name:Haem_degrading;
3350 4330 CDS
ID metaerg.pl|12584
allgo_ids GO:0055085; GO:0030288;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071694138.1 1 326 evalue:2.0e-173 qcov:100.00 identity:94.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:2.5e-80 score:269.1 best_domain_score:268.9 name:DctP;
sp YES;
sprot_desc Solute-binding protein Veis_3954;
sprot_id sp|A1WPV4|DCTP_VEREI;
sprot_target db:uniprot_sprot|sp|A1WPV4|DCTP_VEREI 46 308 evalue:2.0e-39 qcov:80.70 identity:34.60;
tigrfam_acc TIGR00787;
tigrfam_desc TRAP transporter solute receptor, DctP family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctP;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00787 evalue:5.6e-64 score:215.2 best_domain_score:214.9 name:TIGR00787;
3350 3421 signal_peptide
ID metaerg.pl|12585
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
4420 5007 CDS
ID metaerg.pl|12586
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071694137.1 1 195 evalue:1.1e-91 qcov:100.00 identity:94.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:1.5e-19 score:69.5 best_domain_score:69.5 name:DctQ;
tm_num 4;
4420 5007 transmembrane_helix
ID metaerg.pl|12587
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i4456-4524o4567-4620i4681-4749o4792-4860i;
5004 6287 CDS
ID metaerg.pl|12588
allgo_ids GO:0016021; GO:0005886; GO:0022857;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071694136.1 1 427 evalue:5.6e-208 qcov:100.00 identity:97.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:1.3e-113 score:379.2 best_domain_score:378.9 name:DctM;
sprot_desc hypothetical protein;
sprot_id sp|P40800|YGIK_SALTY;
sprot_target db:uniprot_sprot|sp|P40800|YGIK_SALTY 44 425 evalue:7.7e-63 qcov:89.50 identity:38.90;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:4.1e-118 score:393.8 best_domain_score:393.6 name:TIGR00786;
tm_num 11;
5004 6287 transmembrane_helix
ID metaerg.pl|12589
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i5022-5090o5133-5201i5238-5306o5316-5375i5409-5477o5505-5573i5652-5720o5829-5882i5943-6047o6075-6143i6201-6269o;
6355 7140 CDS
ID metaerg.pl|12590
allec_ids 4.2.1.17;
allgo_ids GO:0003824; GO:0004300; GO:0016853; GO:0006635;
allko_ids K15016; K13767; K01692; K00022; K07516; K01782; K10527; K01825; K07515; K07514;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071694135.1 1 260 evalue:4.0e-132 qcov:99.60 identity:90.40;
kegg_pathway_id 00903; 00062; 01040; 00592; 00410; 00071; 00650; 00640; 00280; 00281; 00310; 00380; 00930; 00632;
kegg_pathway_name Limonene and pinene degradation; Fatty acid elongation in mitochondria; Biosynthesis of unsaturated fatty acids; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Butanoate metabolism; Propanoate metabolism; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
metacyc_pathway_id VALDEG-PWY; P3-PWY; PWY-5138; PWY-6435; PWY-561; PWY-5136; FAO-PWY; ILEUDEG-PWY;
metacyc_pathway_name L-valine degradation I;; gallate degradation III (anaerobic);; unsaturated, even numbered fatty acid β-oxidation;; 4-hydroxybenzoate biosynthesis III (plants);; superpathway of glyoxylate cycle and fatty acid degradation;; fatty acid β-oxidation II (peroxisome);; fatty acid β-oxidation I;; L-isoleucine degradation I;;
metacyc_pathway_type VALINE-DEG;; GALLATE-DEG;; Fatty-Acid-Degradation;; 4-Hydroxybenzoate-Biosynthesis;; Energy-Metabolism; Super-Pathways;; Fatty-Acid-Degradation;; Fatty-Acid-Degradation;; ISOLEUCINE-DEG;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:5.8e-41 score:139.7 best_domain_score:139.5 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:1.2e-23 score:83.4 best_domain_score:78.8 name:ECH_2;
sprot_desc Probable enoyl-CoA hydratase;
sprot_id sp|P94549|FADB_BACSU;
sprot_target db:uniprot_sprot|sp|P94549|FADB_BACSU 4 209 evalue:5.1e-17 qcov:78.90 identity:29.00;
7183 8370 CDS
ID metaerg.pl|12591
allec_ids 2.8.3.13;
allgo_ids GO:0003824; GO:0005739; GO:0047369;
allko_ids K18703;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035562277.1 1 395 evalue:6.1e-225 qcov:100.00 identity:97.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF02515;
pfam_desc CoA-transferase family III;
pfam_id CoA_transf_3;
pfam_target db:Pfam-A.hmm|PF02515.17 evalue:1.1e-133 score:445.1 best_domain_score:445.0 name:CoA_transf_3;
sprot_desc Succinate--hydroxymethylglutarate CoA-transferase;
sprot_id sp|Q7TNE1|SUCHY_MOUSE;
sprot_target db:uniprot_sprot|sp|Q7TNE1|SUCHY_MOUSE 1 395 evalue:2.4e-79 qcov:100.00 identity:39.50;
8472 9683 CDS
ID metaerg.pl|12592
allec_ids 2.6.1.45;
allgo_ids GO:0050281;
allko_ids K00830; K00839;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_050713157.1 1 403 evalue:5.2e-232 qcov:100.00 identity:97.50;
kegg_pathway_id 00260;
kegg_pathway_name Glycine, serine and threonine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
metacyc_pathway_id PWY-181; PWY-1622;
metacyc_pathway_name photorespiration;; formaldehyde assimilation I (serine pathway);;
metacyc_pathway_type Photosynthesis;; Formaldehyde-Assimilation;;
pfam_acc PF00266;
pfam_desc Aminotransferase class-V;
pfam_id Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00266.19 evalue:1.5e-28 score:99.0 best_domain_score:98.6 name:Aminotran_5;
sprot_desc Serine--glyoxylate aminotransferase;
sprot_id sp|O08374|SGAA_HYPME;
sprot_target db:uniprot_sprot|sp|O08374|SGAA_HYPME 14 396 evalue:1.7e-99 qcov:95.00 identity:47.50;
9701 12703 CDS
ID metaerg.pl|12593
allgo_ids GO:0003824; GO:0050660; GO:0051539; GO:0004458; GO:0008720; GO:0071949; GO:0046872; GO:1903457;
allko_ids K00004; K00075; K00102;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035562283.1 1 1000 evalue:0.0e+00 qcov:100.00 identity:96.30;
kegg_pathway_id 00650; 00530; 00620;
kegg_pathway_name Butanoate metabolism; Aminosugars metabolism; Pyruvate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF02754; PF02913; PF01565; PF13534; PF13183;
pfam_desc Cysteine-rich domain; FAD linked oxidases, C-terminal domain; FAD binding domain ; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id CCG; FAD-oxidase_C; FAD_binding_4; Fer4_17; Fer4_8;
pfam_target db:Pfam-A.hmm|PF02754.16 evalue:1.1e-06 score:28.0 best_domain_score:13.9 name:CCG; db:Pfam-A.hmm|PF02913.19 evalue:8.2e-53 score:178.8 best_domain_score:178.0 name:FAD-oxidase_C; db:Pfam-A.hmm|PF01565.23 evalue:1.7e-37 score:127.5 best_domain_score:126.5 name:FAD_binding_4; db:Pfam-A.hmm|PF13534.6 evalue:4.4e-09 score:36.0 best_domain_score:35.0 name:Fer4_17; db:Pfam-A.hmm|PF13183.6 evalue:1.3e-10 score:40.8 best_domain_score:39.7 name:Fer4_8;
sprot_desc hypothetical protein;
sprot_id sp|Q57252|Y1163_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57252|Y1163_HAEIN 31 980 evalue:6.6e-81 qcov:95.00 identity:25.70;
12738 13262 CDS
ID metaerg.pl|12594
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000039.1_42 1 173 evalue:1.5e-87 qcov:99.40 identity:94.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00132;
pfam_desc Bacterial transferase hexapeptide (six repeats);
pfam_id Hexapep;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:5.2e-16 score:56.9 best_domain_score:35.8 name:Hexapep;
sprot_desc hypothetical protein;
sprot_id sp|P40882|Y3753_PSEAE;
sprot_target db:uniprot_sprot|sp|P40882|Y3753_PSEAE 4 170 evalue:3.2e-31 qcov:96.00 identity:57.50;
15069 13378 CDS
ID metaerg.pl|12595
allgo_ids GO:0005887; GO:0015129; GO:0015727; GO:0005886; GO:0015295;
allko_ids K03303;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ88221.1 1 563 evalue:5.3e-291 qcov:100.00 identity:94.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF02652;
pfam_desc L-lactate permease;
pfam_id Lactate_perm;
pfam_target db:Pfam-A.hmm|PF02652.14 evalue:1.8e-105 score:352.9 best_domain_score:351.7 name:Lactate_perm;
sprot_desc Putative L-lactate permease;
sprot_id sp|Q57251|Y1218_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57251|Y1218_HAEIN 8 549 evalue:2.2e-41 qcov:96.30 identity:28.00;
tm_num 16;
15069 13378 transmembrane_helix
ID metaerg.pl|12596
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology o13390-13449i13462-13530o13558-13626i13687-13746o13756-13824i13843-13911o13975-14043i14080-14148o14158-14211i14344-14397o14485-14538i14593-14661o14719-14787i14821-14889o14899-14952i14986-15054o;
15449 16141 CDS
ID metaerg.pl|12597
allgo_ids GO:0005515;
allko_ids K04097; K00799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_039859469.1 1 230 evalue:3.5e-116 qcov:100.00 identity:87.00;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00043; PF13410; PF02798; PF13409; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_2; GST_N; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:3.3e-05 score:23.3 best_domain_score:22.5 name:GST_C; db:Pfam-A.hmm|PF13410.6 evalue:2.2e-09 score:36.5 best_domain_score:35.5 name:GST_C_2; db:Pfam-A.hmm|PF02798.20 evalue:1.9e-08 score:33.8 best_domain_score:32.8 name:GST_N; db:Pfam-A.hmm|PF13409.6 evalue:6.7e-14 score:51.2 best_domain_score:50.4 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:4.3e-15 score:55.1 best_domain_score:54.1 name:GST_N_3;
16221 16910 CDS
ID metaerg.pl|12598
allec_ids 1.8.4.-;
allgo_ids GO:0005515; GO:0015036; GO:0004601; GO:0006979;
allko_ids K00799; K04097; K11209;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis_A;
genomedb_acc GCF_002211105.1;
genomedb_target db:genomedb|GCF_002211105.1|WP_088701984.1 1 229 evalue:2.4e-128 qcov:100.00 identity:94.30;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00043; PF13410; PF14497; PF02798; PF13409; PF13417;
pfam_desc Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, C-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, N-terminal domain;
pfam_id GST_C; GST_C_2; GST_C_3; GST_N; GST_N_2; GST_N_3;
pfam_target db:Pfam-A.hmm|PF00043.25 evalue:1.6e-10 score:40.3 best_domain_score:39.5 name:GST_C; db:Pfam-A.hmm|PF13410.6 evalue:7.7e-08 score:31.5 best_domain_score:30.2 name:GST_C_2; db:Pfam-A.hmm|PF14497.6 evalue:7.4e-07 score:28.5 best_domain_score:27.8 name:GST_C_3; db:Pfam-A.hmm|PF02798.20 evalue:1.6e-14 score:53.3 best_domain_score:52.0 name:GST_N; db:Pfam-A.hmm|PF13409.6 evalue:4.6e-11 score:42.1 best_domain_score:36.5 name:GST_N_2; db:Pfam-A.hmm|PF13417.6 evalue:2.9e-11 score:42.8 best_domain_score:42.0 name:GST_N_3;
sprot_desc Disulfide-bond oxidoreductase YfcG;
sprot_id sp|P77526|YFCG_ECOLI;
sprot_target db:uniprot_sprot|sp|P77526|YFCG_ECOLI 1 202 evalue:2.0e-70 qcov:88.20 identity:60.90;
17090 17446 CDS
ID metaerg.pl|12599
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF60228.1 1 118 evalue:1.1e-47 qcov:100.00 identity:90.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF09361;
pfam_desc Phasin protein;
pfam_id Phasin_2;
pfam_target db:Pfam-A.hmm|PF09361.10 evalue:5.1e-10 score:38.7 best_domain_score:38.7 name:Phasin_2;
18084 17542 CDS
ID metaerg.pl|12600
allec_ids 4.1.1.97; 4.1.1.-;
allgo_ids GO:0016831; GO:0016491; GO:0019428; GO:0006144; GO:0019628;
allko_ids K13485; K00365;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF60227.1 1 177 evalue:2.2e-81 qcov:98.30 identity:87.00;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
metacyc_pathway_id PWY-5163; PWY-5114; PWY-5113; UBISYN-PWY; PWY-5856; ALL-CHORISMATE-PWY; PWY-181; PWY-5826; PWY-5855; PWY-5857;
metacyc_pathway_name p-cumate degradation to 2-hydroxypentadienoate;; UDP-sugars interconversion;; UDP-D-apiose biosynthesis (from UDP-D-glucuronate);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ubiquinol-9 biosynthesis (prokaryotic);; superpathway of chorismate metabolism;; photorespiration;; hypoglycin biosynthesis;; ubiquinol-7 biosynthesis (prokaryotic);; ubiquinol-10 biosynthesis (prokaryotic);;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; UDP-Sugar-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; Super-Pathways;; Photosynthesis;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;;
pfam_acc PF09349;
pfam_desc OHCU decarboxylase;
pfam_id OHCU_decarbox;
pfam_target db:Pfam-A.hmm|PF09349.10 evalue:4.8e-43 score:146.5 best_domain_score:146.4 name:OHCU_decarbox;
sprot_desc 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;
sprot_id sp|D4GPU8|URAD_HALVD;
sprot_target db:uniprot_sprot|sp|D4GPU8|URAD_HALVD 14 175 evalue:7.8e-25 qcov:90.00 identity:40.10;
tigrfam_acc TIGR03164;
tigrfam_desc OHCU decarboxylase;
tigrfam_name UHCUDC;
tigrfam_target db:TIGRFAMs.hmm|TIGR03164 evalue:8.6e-61 score:203.8 best_domain_score:203.6 name:TIGR03164;
18232 18585 CDS
ID metaerg.pl|12601
allec_ids 3.5.2.17;
allgo_ids GO:0033971; GO:0006144;
allko_ids K07127; K13484;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_027958116.1 1 117 evalue:1.6e-56 qcov:100.00 identity:91.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
metacyc_pathway_id PWY-5691; URSIN-PWY;
metacyc_pathway_name urate conversion to allantoin I;; ureide biosynthesis;;
metacyc_pathway_type Urate-Degradation;; Polyamine-Biosynthesis; Super-Pathways;;
pfam_acc PF00576;
pfam_desc HIUase/Transthyretin family;
pfam_id Transthyretin;
pfam_target db:Pfam-A.hmm|PF00576.21 evalue:1.4e-35 score:121.5 best_domain_score:121.4 name:Transthyretin;
sprot_desc 5-hydroxyisourate hydrolase;
sprot_id sp|Q98CI7|HIUH_RHILO;
sprot_target db:uniprot_sprot|sp|Q98CI7|HIUH_RHILO 2 117 evalue:3.0e-41 qcov:99.10 identity:68.10;
tigrfam_acc TIGR02962;
tigrfam_desc hydroxyisourate hydrolase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name hdxy_isourate;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02962 evalue:6.7e-40 score:135.1 best_domain_score:135.0 name:TIGR02962;
18646 19848 CDS
ID metaerg.pl|12602
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071694123.1 1 399 evalue:4.3e-218 qcov:99.80 identity:93.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF06181;
pfam_desc Urate oxidase N-terminal;
pfam_id Urate_ox_N;
pfam_target db:Pfam-A.hmm|PF06181.11 evalue:1.6e-126 score:420.9 best_domain_score:420.6 name:Urate_ox_N;
tm_num 8;
18646 19848 transmembrane_helix
ID metaerg.pl|12603
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology o18688-18747i18889-18957o19015-19083i19117-19185o19195-19263i19345-19413o19426-19494i19513-19581o;
19864 20580 CDS
ID metaerg.pl|12604
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI68116.1 1 237 evalue:4.0e-115 qcov:99.60 identity:89.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:1.6e-20 score:73.0 best_domain_score:73.0 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:7.6e-14 score:50.4 best_domain_score:49.4 name:GntR;
21015 22652 CDS
ID metaerg.pl|12605
allgo_ids GO:0043190; GO:0030288; GO:1904680; GO:0015031;
allko_ids K02035; K13889; K15580;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086355.1 1 545 evalue:0.0e+00 qcov:100.00 identity:94.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00496;
pfam_desc Bacterial extracellular solute-binding proteins, family 5 Middle;
pfam_id SBP_bac_5;
pfam_target db:Pfam-A.hmm|PF00496.22 evalue:2e-70 score:236.9 best_domain_score:236.5 name:SBP_bac_5;
sp YES;
sprot_desc Periplasmic oligopeptide-binding protein;
sprot_id sp|P71370|OPPA_HAEIN;
sprot_target db:uniprot_sprot|sp|P71370|OPPA_HAEIN 52 528 evalue:6.9e-24 qcov:87.50 identity:25.00;
21015 21119 signal_peptide
ID metaerg.pl|12606
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
22707 23660 CDS
ID metaerg.pl|12607
allgo_ids GO:0016020; GO:0055085; GO:0005887; GO:0005886; GO:0016151; GO:0015099;
allko_ids K02033; K13890; K15585;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086356.1 1 317 evalue:3.2e-168 qcov:100.00 identity:96.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.3e-41 score:141.7 best_domain_score:141.7 name:BPD_transp_1;
sp YES;
sprot_desc Nickel transport system permease protein NikB;
sprot_id sp|P33591|NIKB_ECOLI;
sprot_target db:uniprot_sprot|sp|P33591|NIKB_ECOLI 1 316 evalue:3.7e-46 qcov:99.70 identity:36.50;
tm_num 6;
22707 22793 signal_peptide
ID metaerg.pl|12608
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
22707 23660 transmembrane_helix
ID metaerg.pl|12609
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i22731-22799o23004-23072i23109-23177o23241-23309i23430-23498o23556-23624i;
23679 24575 CDS
ID metaerg.pl|12610
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886;
allko_ids K02034; K02033; K02031; K13891;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas hydrothermalis;
genomedb_acc GCF_002442575.1;
genomedb_target db:genomedb|GCF_002442575.1|WP_039175414.1 1 298 evalue:8.6e-147 qcov:100.00 identity:90.30;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00528; PF12911;
pfam_desc Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C;
pfam_id BPD_transp_1; OppC_N;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:1.1e-20 score:73.4 best_domain_score:73.4 name:BPD_transp_1; db:Pfam-A.hmm|PF12911.7 evalue:1.6e-11 score:43.3 best_domain_score:43.3 name:OppC_N;
sprot_desc Glutathione transport system permease protein GsiD;
sprot_id sp|Q6D3B2|GSID_PECAS;
sprot_target db:uniprot_sprot|sp|Q6D3B2|GSID_PECAS 24 298 evalue:7.8e-54 qcov:92.30 identity:40.00;
tm_num 5;
23679 24575 transmembrane_helix
ID metaerg.pl|12611
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i23784-23852o23994-24062i24096-24164o24333-24401i24459-24527o;
24572 25681 CDS
ID metaerg.pl|12612
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0015031;
allko_ids K02000; K10243; K02023; K12372; K05816; K11076; K02049; K01995; K10112; K01998; K10111; K02031; K11072; K02068; K02045; K01996; K02071; K06861; K13896; K11084; K02017; K02032; K05847; K02010; K01997; K02052; K02006;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086358.1 1 367 evalue:3.5e-182 qcov:99.50 identity:88.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
metacyc_pathway_id PWY-6166; PWY-6188; PWY-6171; PWY-6135; PWY-6113; PWYG-321;
metacyc_pathway_name ; ; ; ; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type ; ; ; ; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF13401; PF00005; PF08352;
pfam_desc AAA domain; ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id AAA_22; ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF13401.6 evalue:1.4e-06 score:27.9 best_domain_score:24.4 name:AAA_22; db:Pfam-A.hmm|PF00005.27 evalue:1.9e-34 score:118.4 best_domain_score:117.9 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:3e-18 score:65.3 best_domain_score:64.4 name:oligo_HPY;
sprot_desc Putative peptide import ATP-binding protein BOV_A0347;
sprot_id sp|A5VU86|Y2547_BRUO2;
sprot_target db:uniprot_sprot|sp|A5VU86|Y2547_BRUO2 29 332 evalue:4.1e-81 qcov:82.40 identity:51.80;
tigrfam_acc TIGR01727;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name oligo_HPY;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:7.8e-25 score:85.9 best_domain_score:85.3 name:TIGR01727;
25678 26706 CDS
ID metaerg.pl|12613
allec_ids 3.6.3.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015031;
allko_ids K02049; K02031; K02006; K12371; K13896; K02034; K02032; K01996; K06861; K02071; K02045;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086359.1 1 342 evalue:6.1e-173 qcov:100.00 identity:91.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
metacyc_pathway_id PWYG-321; PWY-6113; PWY-6171; PWY-6135; PWY-6188; PWY-6166;
metacyc_pathway_name mycolate biosynthesis;; superpathway of mycolate biosynthesis;; ; ; ; ;
metacyc_pathway_type Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ; ; ; ;
pfam_acc PF13304; PF00005; PF08352;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region;
pfam_id AAA_21; ABC_tran; oligo_HPY;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.1e-07 score:31.2 best_domain_score:23.0 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.6e-23 score:82.9 best_domain_score:82.5 name:ABC_tran; db:Pfam-A.hmm|PF08352.12 evalue:2.9e-16 score:59.0 best_domain_score:57.9 name:oligo_HPY;
sprot_desc Putative peptide import ATP-binding protein BMEII0863;
sprot_id sp|Q8YBN6|Y3863_BRUME;
sprot_target db:uniprot_sprot|sp|Q8YBN6|Y3863_BRUME 25 339 evalue:7.7e-82 qcov:92.10 identity:49.20;
tigrfam_acc TIGR01727;
tigrfam_desc oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name oligo_HPY;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01727 evalue:6.3e-26 score:89.4 best_domain_score:87.5 name:TIGR01727;
27768 26863 CDS
ID metaerg.pl|12614
allgo_ids GO:0003700; GO:0006355; GO:0005737; GO:0003677; GO:0009082;
allko_ids K02521;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis_A;
genomedb_acc GCF_002211105.1;
genomedb_target db:genomedb|GCF_002211105.1|WP_088702000.1 10 301 evalue:5.2e-152 qcov:97.00 identity:94.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00126; PF03466;
pfam_desc Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain;
pfam_id HTH_1; LysR_substrate;
pfam_target db:Pfam-A.hmm|PF00126.27 evalue:7.1e-17 score:60.4 best_domain_score:59.3 name:HTH_1; db:Pfam-A.hmm|PF03466.20 evalue:1e-32 score:112.4 best_domain_score:112.1 name:LysR_substrate;
sprot_desc HTH-type transcriptional activator IlvY;
sprot_id sp|P44821|ILVY_HAEIN;
sprot_target db:uniprot_sprot|sp|P44821|ILVY_HAEIN 10 301 evalue:4.8e-59 qcov:97.00 identity:41.50;
27938 29410 CDS
ID metaerg.pl|12615
allec_ids 1.1.1.86;
allgo_ids GO:0004455; GO:0009082; GO:0055114; GO:0000287; GO:0009097; GO:0009099;
allko_ids K00053;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064234211.1 1 490 evalue:5.0e-277 qcov:100.00 identity:96.90;
kegg_pathway_id 00290; 00770;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
metacyc_pathway_id ILEUSYN-PWY; PWY-5103; PWY-5104; BRANCHED-CHAIN-AA-SYN-PWY; PWY-3001; THREOCAT-PWY; VALSYN-PWY; PWY-5101;
metacyc_pathway_name L-isoleucine biosynthesis I (from threonine);; L-isoleucine biosynthesis III;; L-isoleucine biosynthesis IV;; superpathway of branched chain amino acid biosynthesis;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-threonine metabolism;; L-valine biosynthesis;; L-isoleucine biosynthesis II;;
metacyc_pathway_type ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; Super-Pathways; THREONINE-DEG;; VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;;
pfam_acc PF01450; PF07991;
pfam_desc Acetohydroxy acid isomeroreductase, catalytic domain; Acetohydroxy acid isomeroreductase, NADPH-binding domain;
pfam_id IlvC; IlvN;
pfam_target db:Pfam-A.hmm|PF01450.19 evalue:3.9e-49 score:165.9 best_domain_score:100.0 name:IlvC; db:Pfam-A.hmm|PF07991.12 evalue:4.7e-59 score:197.9 best_domain_score:197.4 name:IlvN;
sprot_desc Ketol-acid reductoisomerase (NADP(+));
sprot_id sp|A6W216|ILVC_MARMS;
sprot_target db:uniprot_sprot|sp|A6W216|ILVC_MARMS 1 490 evalue:1.9e-270 qcov:100.00 identity:93.90;
tigrfam_acc TIGR00465;
tigrfam_desc ketol-acid reductoisomerase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ilvC;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00465 evalue:1.3e-132 score:440.7 best_domain_score:403.4 name:TIGR00465;
29525 31027 CDS
ID metaerg.pl|12616
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0006281;
allko_ids K06861; K02071; K01996; K11072; K02045; K01997; K02003; K09817; K02010; K05847; K02006; K02052; K02032; K02017; K05776; K01990; K02023; K02000; K11962; K01995; K02049; K01998; K10111; K05816; K09687; K02013; K02193;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF60221.1 1 500 evalue:2.9e-280 qcov:100.00 identity:96.80;
kegg_pathway_id 00910; 02010;
kegg_pathway_name Nitrogen metabolism; ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF13304; PF13555; PF00005; PF01695;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; P-loop containing region of AAA domain; ABC transporter; IstB-like ATP binding protein;
pfam_id AAA_21; AAA_29; ABC_tran; IstB_IS21;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:3.2e-11 score:42.8 best_domain_score:16.3 name:AAA_21; db:Pfam-A.hmm|PF13555.6 evalue:7.9e-07 score:28.0 best_domain_score:15.2 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:2.3e-41 score:140.7 best_domain_score:71.0 name:ABC_tran; db:Pfam-A.hmm|PF01695.17 evalue:9.9e-06 score:24.6 best_domain_score:15.4 name:IstB_IS21;
sprot_desc ABC transporter ATP-binding protein ModF;
sprot_id sp|P31060|MODF_ECOLI;
sprot_target db:uniprot_sprot|sp|P31060|MODF_ECOLI 7 485 evalue:9.5e-105 qcov:95.80 identity:42.10;
31377 31066 CDS
ID metaerg.pl|12617
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF02604;
pfam_desc Antitoxin Phd_YefM, type II toxin-antitoxin system;
pfam_id PhdYeFM_antitox;
pfam_target db:Pfam-A.hmm|PF02604.19 evalue:4.3e-11 score:41.7 best_domain_score:40.9 name:PhdYeFM_antitox;
31754 31473 CDS
ID metaerg.pl|12618
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Marinospirillum;s__Marinospirillum alkaliphilum;
genomedb_acc GCF_900119735.1;
genomedb_target db:genomedb|GCF_900119735.1|WP_072327202.1 1 93 evalue:7.0e-39 qcov:100.00 identity:89.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF05016;
pfam_desc #=GF GA 21.90; 21.90;;
pfam_id ParE_toxin;
pfam_target db:Pfam-A.hmm|PF05016.15 evalue:8.7e-16 score:57.6 best_domain_score:57.4 name:ParE_toxin;
32023 31751 CDS
ID metaerg.pl|12619
allgo_ids GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Halomonas_D;s__Halomonas_D utahensis;
genomedb_acc GCF_900162675.1;
genomedb_target db:genomedb|GCF_900162675.1|WP_077531134.1 1 90 evalue:2.0e-38 qcov:100.00 identity:92.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF01402;
pfam_desc Ribbon-helix-helix protein, copG family;
pfam_id RHH_1;
pfam_target db:Pfam-A.hmm|PF01402.21 evalue:8e-07 score:28.0 best_domain_score:27.5 name:RHH_1;
33191 32436 CDS
ID metaerg.pl|12620
allec_ids 5.1.99.5;
allgo_ids GO:0006807; GO:0036361; GO:0036348; GO:0008652;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064234220.1 1 250 evalue:1.0e-124 qcov:99.60 identity:92.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF01177;
pfam_desc Asp/Glu/Hydantoin racemase;
pfam_id Asp_Glu_race;
pfam_target db:Pfam-A.hmm|PF01177.22 evalue:1.5e-10 score:40.6 best_domain_score:40.0 name:Asp_Glu_race;
sprot_desc Hydantoin racemase;
sprot_id sp|Q6TMG4|HYDRA_RHIML;
sprot_target db:uniprot_sprot|sp|Q6TMG4|HYDRA_RHIML 1 237 evalue:1.3e-54 qcov:94.40 identity:49.40;
33582 34517 CDS
ID metaerg.pl|12621
allec_ids 3.5.1.41;
allgo_ids GO:0005975; GO:0016810; GO:0005631; GO:0005829; GO:0005634; GO:0004099; GO:0030476; GO:0034232;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113773.1 2 311 evalue:1.0e-182 qcov:99.70 identity:96.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF01522;
pfam_desc Polysaccharide deacetylase;
pfam_id Polysacc_deac_1;
pfam_target db:Pfam-A.hmm|PF01522.21 evalue:1.2e-12 score:47.1 best_domain_score:45.7 name:Polysacc_deac_1;
sprot_desc Chitin deacetylase 1;
sprot_id sp|O13842|CDA1_SCHPO;
sprot_target db:uniprot_sprot|sp|O13842|CDA1_SCHPO 10 307 evalue:8.9e-77 qcov:95.80 identity:47.00;
tigrfam_acc TIGR03212;
tigrfam_desc putative urate catabolism protein;
tigrfam_name uraD_N-term-dom;
tigrfam_target db:TIGRFAMs.hmm|TIGR03212 evalue:1e-161 score:536.0 best_domain_score:535.8 name:TIGR03212;
34542 35417 CDS
ID metaerg.pl|12622
allgo_ids GO:0003700; GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035562336.1 1 291 evalue:4.6e-153 qcov:100.00 identity:95.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF01418; PF01380;
pfam_desc Helix-turn-helix domain, rpiR family; SIS domain;
pfam_id HTH_6; SIS;
pfam_target db:Pfam-A.hmm|PF01418.17 evalue:1.8e-10 score:39.9 best_domain_score:39.0 name:HTH_6; db:Pfam-A.hmm|PF01380.22 evalue:3.5e-06 score:26.1 best_domain_score:25.4 name:SIS;
35777 36631 CDS
ID metaerg.pl|12623
allec_ids 4.2.1.51; 4.2.1.91;
allgo_ids GO:0042597; GO:0047769; GO:0004664; GO:0009094;
allko_ids K16254; K02030; K02029; K01713;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI68126.1 1 284 evalue:5.9e-145 qcov:100.00 identity:93.70;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
metacyc_pathway_id PWY-3462; PHESYN; PWY-3481; COMPLETE-ARO-PWY; ALL-CHORISMATE-PWY;
metacyc_pathway_name L-phenylalanine biosynthesis II;; L-phenylalanine biosynthesis I;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; superpathway of aromatic amino acid biosynthesis;; superpathway of chorismate metabolism;;
metacyc_pathway_type PHENYLALANINE-SYN;; PHENYLALANINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF00497;
pfam_desc Bacterial extracellular solute-binding proteins, family 3;
pfam_id SBP_bac_3;
pfam_target db:Pfam-A.hmm|PF00497.20 evalue:8.7e-49 score:165.2 best_domain_score:164.8 name:SBP_bac_3;
sp YES;
sprot_desc Cyclohexadienyl dehydratase;
sprot_id sp|Q01269|PHEC_PSEAE;
sprot_target db:uniprot_sprot|sp|Q01269|PHEC_PSEAE 28 283 evalue:4.7e-08 qcov:90.10 identity:24.50;
tm_num 1;
35777 35911 signal_peptide
ID metaerg.pl|12624
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
35777 36631 transmembrane_helix
ID metaerg.pl|12625
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i35837-35905o;
36640 37317 CDS
ID metaerg.pl|12626
allgo_ids GO:0016020; GO:0055085; GO:0043190; GO:0022857; GO:0071705;
allko_ids K02030; K02029; K10019;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086369.1 1 225 evalue:7.0e-109 qcov:100.00 identity:97.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:2.6e-14 score:52.6 best_domain_score:52.6 name:BPD_transp_1;
sprot_desc Nopaline transport system permease protein NocM;
sprot_id sp|P35113|NOCM_AGRFC;
sprot_target db:uniprot_sprot|sp|P35113|NOCM_AGRFC 5 211 evalue:1.2e-17 qcov:92.00 identity:30.40;
tigrfam_acc TIGR01726;
tigrfam_desc amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name HEQRo_perm_3TM;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01726 evalue:3e-27 score:94.2 best_domain_score:94.2 name:TIGR01726;
tm_num 4;
36640 37317 transmembrane_helix
ID metaerg.pl|12627
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology o36697-36765i36856-36924o37069-37137i37198-37266o;
37314 37970 CDS
ID metaerg.pl|12628
allgo_ids GO:0016020; GO:0055085; GO:0043190; GO:0005886; GO:0022857; GO:0006865;
allko_ids K02029; K02030; K10009;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086370.1 1 218 evalue:9.8e-116 qcov:100.00 identity:99.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:9.4e-20 score:70.4 best_domain_score:70.4 name:BPD_transp_1;
sprot_desc Probable amino-acid ABC transporter permease protein YckA;
sprot_id sp|P42399|YCKA_BACSU;
sprot_target db:uniprot_sprot|sp|P42399|YCKA_BACSU 1 211 evalue:2.4e-28 qcov:96.80 identity:32.60;
tigrfam_acc TIGR01726;
tigrfam_desc amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name HEQRo_perm_3TM;
tigrfam_sub1role Amino acids, peptides and amines;
tigrfam_target db:TIGRFAMs.hmm|TIGR01726 evalue:2.3e-29 score:101.0 best_domain_score:101.0 name:TIGR01726;
tm_num 5;
37314 37970 transmembrane_helix
ID metaerg.pl|12629
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology o37356-37424i37482-37550o37560-37628i37755-37823o37866-37934i;
37951 38679 CDS
ID metaerg.pl|12630
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015424;
allko_ids K01996; K06861; K02071; K06021; K10441; K02062; K10041; K10821; K02028; K11072; K02068; K02045; K02003; K01997; K05847; K02056; K02010; K02052; K02006; K09972; K02004; K11084; K02017; K02032; K10017; K01990; K10243; K10021; K02036; K09812; K10010; K02018; K10025; K10038; K02023; K10000; K02029; K10539; K02000; K01995; K02065; K02049; K02031; K10562; K01998; K10545; K10112; K10111; K06857; K05816; K10235; K11076;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002082565;
genomedb_acc GCF_002082565.1;
genomedb_target db:genomedb|GCF_002082565.1|WP_083006873.1 1 242 evalue:7.5e-125 qcov:100.00 identity:97.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF13304; PF13401; PF09818; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; Predicted ATPase of the ABC class; ABC transporter;
pfam_id AAA_21; AAA_22; ABC_ATPase; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.8e-12 score:46.3 best_domain_score:25.1 name:AAA_21; db:Pfam-A.hmm|PF13401.6 evalue:5.3e-07 score:29.2 best_domain_score:27.1 name:AAA_22; db:Pfam-A.hmm|PF09818.9 evalue:7.1e-06 score:24.3 best_domain_score:10.1 name:ABC_ATPase; db:Pfam-A.hmm|PF00005.27 evalue:1.1e-37 score:128.8 best_domain_score:128.4 name:ABC_tran;
sprot_desc Glutamine transport ATP-binding protein GlnQ;
sprot_id sp|P27675|GLNQ_GEOSE;
sprot_target db:uniprot_sprot|sp|P27675|GLNQ_GEOSE 3 242 evalue:6.7e-72 qcov:99.20 identity:57.10;
40115 38676 CDS
ID metaerg.pl|12631
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF60207.1 1 479 evalue:5.1e-250 qcov:100.00 identity:95.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF03606;
pfam_desc C4-dicarboxylate anaerobic carrier;
pfam_id DcuC;
pfam_target db:Pfam-A.hmm|PF03606.15 evalue:4.6e-108 score:360.9 best_domain_score:360.7 name:DcuC;
sprot_desc hypothetical protein;
sprot_id sp|P55908|YCGA_BACSU;
sprot_target db:uniprot_sprot|sp|P55908|YCGA_BACSU 1 477 evalue:2.0e-75 qcov:99.60 identity:33.10;
tm_num 11;
40115 38676 transmembrane_helix
ID metaerg.pl|12632
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i38745-38813o38919-38987i39048-39107o39117-39170i39189-39257o39285-39353i39486-39539o39549-39617i39741-39809o39945-40013i40032-40100o;
40397 41227 CDS
ID metaerg.pl|12633
allec_ids 3.5.3.26;
allgo_ids GO:0006355; GO:0005737; GO:0030145; GO:0071522; GO:0006144;
allko_ids K01485; K00971; K00634; K14977;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis_A;
genomedb_acc GCF_002211105.1;
genomedb_target db:genomedb|GCF_002211105.1|WP_088698971.1 1 276 evalue:1.8e-159 qcov:100.00 identity:94.90;
kegg_pathway_id 00051; 00240; 00650;
kegg_pathway_name Fructose and mannose metabolism; Pyrimidine metabolism; Butanoate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF02311; PF07883; PF05899;
pfam_desc AraC-like ligand binding domain; Cupin domain; Protein of unknown function (DUF861);
pfam_id AraC_binding; Cupin_2; Cupin_3;
pfam_target db:Pfam-A.hmm|PF02311.19 evalue:5.7e-12 score:44.9 best_domain_score:25.6 name:AraC_binding; db:Pfam-A.hmm|PF07883.11 evalue:1.9e-28 score:97.2 best_domain_score:56.8 name:Cupin_2; db:Pfam-A.hmm|PF05899.12 evalue:1.5e-15 score:55.9 best_domain_score:43.9 name:Cupin_3;
sprot_desc (S)-ureidoglycine aminohydrolase;
sprot_id sp|P75713|ALLE_ECOLI;
sprot_target db:uniprot_sprot|sp|P75713|ALLE_ECOLI 18 267 evalue:1.1e-25 qcov:90.60 identity:29.00;
tigrfam_acc TIGR03214;
tigrfam_desc putative allantoin catabolism protein;
tigrfam_name ura-cupin;
tigrfam_target db:TIGRFAMs.hmm|TIGR03214 evalue:4.7e-118 score:392.4 best_domain_score:392.2 name:TIGR03214;
41237 41722 CDS
ID metaerg.pl|12634
allec_ids 4.3.2.3;
allgo_ids GO:0000256; GO:0050385; GO:0004848; GO:0006145;
allko_ids K01483;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF60205.1 1 161 evalue:3.0e-85 qcov:100.00 identity:95.00;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
metacyc_pathway_id URDEGR-PWY;
metacyc_pathway_name superpathway of allantoin degradation in plants;;
metacyc_pathway_type Allantoin-degradation; Super-Pathways;;
pfam_acc PF04115;
pfam_desc Ureidoglycolate lyase;
pfam_id Ureidogly_lyase;
pfam_target db:Pfam-A.hmm|PF04115.12 evalue:1e-49 score:168.1 best_domain_score:168.0 name:Ureidogly_lyase;
sprot_desc Ureidoglycolate lyase;
sprot_id sp|Q11EH0|ALLA_CHESB;
sprot_target db:uniprot_sprot|sp|Q11EH0|ALLA_CHESB 1 153 evalue:1.1e-43 qcov:95.00 identity:57.50;
41827 43302 CDS
ID metaerg.pl|12635
allec_ids 2.7.1.40;
allgo_ids GO:0000287; GO:0004743; GO:0006096; GO:0030955; GO:0005829; GO:0005524; GO:0042802; GO:0016301; GO:0051289;
allko_ids K12406; K00873;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas nigrificans;
genomedb_acc GCF_002374315.1;
genomedb_target db:genomedb|GCF_002374315.1|WP_096652967.1 1 490 evalue:1.4e-263 qcov:99.80 identity:97.60;
kegg_pathway_id 00230; 00620; 00710; 00010;
kegg_pathway_name Purine metabolism; Pyruvate metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
metacyc_pathway_id PWY-2221; ANARESP1-PWY; GLYCOLYSIS; GLYCOLYSIS-E-D; PWY-6146; P122-PWY; NPGLUCAT-PWY; P124-PWY; FERMENTATION-PWY; P341-PWY; PWY-6142; P461-PWY; PWY-5484; ANAGLYCOLYSIS-PWY; PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; PWY-5723; P441-PWY;
metacyc_pathway_name Entner-Doudoroff pathway III (semi-phosphorylative);; ; glycolysis I (from glucose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; heterolactic fermentation;; Entner-Doudoroff pathway II (non-phosphorylative);; Bifidobacterium shunt;; mixed acid fermentation;; glycolysis V (Pyrococcus);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; Rubisco shunt;; superpathway of N-acetylneuraminate degradation;;
metacyc_pathway_type Entner-Duodoroff-Pathways;; ; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Biosynthesis; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Entner-Duodoroff-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis; Super-Pathways;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; Energy-Metabolism;; CARBOXYLATES-DEG; Super-Pathways;;
pfam_acc PF00224; PF02887;
pfam_desc Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain;
pfam_id PK; PK_C;
pfam_target db:Pfam-A.hmm|PF00224.21 evalue:1.8e-124 score:414.4 best_domain_score:414.0 name:PK; db:Pfam-A.hmm|PF02887.16 evalue:1.1e-27 score:95.9 best_domain_score:94.6 name:PK_C;
sprot_desc Pyruvate kinase II;
sprot_id sp|P21599|KPYK2_ECOLI;
sprot_target db:uniprot_sprot|sp|P21599|KPYK2_ECOLI 9 484 evalue:2.6e-147 qcov:96.90 identity:60.50;
tigrfam_acc TIGR01064;
tigrfam_desc pyruvate kinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name pyruv_kin;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01064 evalue:1.2e-157 score:524.4 best_domain_score:524.2 name:TIGR01064;
43289 44077 CDS
ID metaerg.pl|12636
allgo_ids GO:0042597; GO:0046872; GO:0030973; GO:0015689;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086374.1 3 262 evalue:7.8e-120 qcov:99.20 identity:85.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF13531;
pfam_desc Bacterial extracellular solute-binding protein;
pfam_id SBP_bac_11;
pfam_target db:Pfam-A.hmm|PF13531.6 evalue:1e-44 score:152.2 best_domain_score:152.1 name:SBP_bac_11;
sp YES;
sprot_desc Molybdate-binding protein ModA;
sprot_id sp|Q08383|MODA_RHOCA;
sprot_target db:uniprot_sprot|sp|Q08383|MODA_RHOCA 12 262 evalue:5.5e-27 qcov:95.80 identity:34.10;
tigrfam_acc TIGR01256;
tigrfam_desc molybdate ABC transporter, periplasmic molybdate-binding protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name modA;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01256 evalue:1.1e-48 score:165.2 best_domain_score:164.7 name:TIGR01256;
tm_num 1;
43289 43360 signal_peptide
ID metaerg.pl|12637
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
43289 44077 transmembrane_helix
ID metaerg.pl|12638
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i43313-43381o;
44105 44773 CDS
ID metaerg.pl|12639
allgo_ids GO:0016020; GO:0055085; GO:0016021; GO:0005886; GO:0015098;
allko_ids K02011; K02018; K10109;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas nigrificans;
genomedb_acc GCF_002374315.1;
genomedb_target db:genomedb|GCF_002374315.1|WP_096652963.1 1 222 evalue:9.9e-116 qcov:100.00 identity:94.60;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00528;
pfam_desc Binding-protein-dependent transport system inner membrane component;
pfam_id BPD_transp_1;
pfam_target db:Pfam-A.hmm|PF00528.22 evalue:7.3e-21 score:74.0 best_domain_score:73.6 name:BPD_transp_1;
sprot_desc Molybdenum transport system permease protein ModB;
sprot_id sp|P37731|MODB_AZOVI;
sprot_target db:uniprot_sprot|sp|P37731|MODB_AZOVI 2 211 evalue:1.4e-39 qcov:94.60 identity:42.50;
tigrfam_acc TIGR02141;
tigrfam_desc molybdate ABC transporter, permease protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name modB_ABC;
tigrfam_sub1role Anions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02141 evalue:6e-66 score:221.2 best_domain_score:220.9 name:TIGR02141;
tm_num 5;
44105 44773 transmembrane_helix
ID metaerg.pl|12640
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology o44132-44200i44234-44302o44345-44413i44579-44647o44675-44743i;
44736 45911 CDS
ID metaerg.pl|12641
allec_ids 7.3.2.3;
allgo_ids GO:0005524; GO:0043190; GO:0016887; GO:0015419; GO:0102025;
allko_ids K11084; K02017; K02032; K02003; K01997; K05847; K09817; K02010; K02052; K02006; K02004; K02062; K02028; K02068; K11072; K02045; K01996; K06861; K02071; K10199; K06857; K05816; K10235; K02013; K02193; K11076; K01995; K02065; K02049; K02031; K01998; K10111; K10112; K02000; K01990; K10243; K09812; K02018; K02023; K10000;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_045812078.1 1 391 evalue:1.8e-192 qcov:100.00 identity:87.10;
kegg_pathway_id 00910; 02010;
kegg_pathway_name Nitrogen metabolism; ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF13304; PF00005; PF08402;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter; TOBE domain;
pfam_id AAA_21; ABC_tran; TOBE_2;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1e-08 score:34.6 best_domain_score:19.1 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:2.9e-34 score:117.8 best_domain_score:117.0 name:ABC_tran; db:Pfam-A.hmm|PF08402.10 evalue:2.4e-05 score:23.6 best_domain_score:21.6 name:TOBE_2;
sprot_desc Sulfate/thiosulfate import ATP-binding protein CysA;
sprot_id sp|Q8XZP8|CYSA_RALSO;
sprot_target db:uniprot_sprot|sp|Q8XZP8|CYSA_RALSO 43 367 evalue:1.8e-50 qcov:83.10 identity:38.90;
45914 46447 CDS
ID metaerg.pl|12642
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF60200.1 1 175 evalue:1.6e-76 qcov:98.90 identity:82.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF02643;
pfam_desc Uncharacterized ACR, COG1430;
pfam_id DUF192;
pfam_target db:Pfam-A.hmm|PF02643.15 evalue:1.3e-32 score:111.0 best_domain_score:110.7 name:DUF192;
sp YES;
45914 46024 signal_peptide
ID metaerg.pl|12643
Note TAT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
47304 46444 CDS
ID metaerg.pl|12644
allgo_ids GO:0016020; GO:0016021; GO:0005886; GO:0015562; GO:0033228;
allko_ids K15268;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas nigrificans;
genomedb_acc GCF_002374315.1;
genomedb_target db:genomedb|GCF_002374315.1|WP_096653070.1 1 279 evalue:7.5e-140 qcov:97.60 identity:97.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.5e-34 score:118.3 best_domain_score:62.8 name:EamA;
sprot_desc Probable amino-acid metabolite efflux pump;
sprot_id sp|P31125|EAMA_ECOLI;
sprot_target db:uniprot_sprot|sp|P31125|EAMA_ECOLI 1 276 evalue:5.4e-20 qcov:96.50 identity:30.70;
tm_num 10;
47304 46444 transmembrane_helix
ID metaerg.pl|12645
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i46462-46530o46540-46596i46615-46683o46696-46764i46789-46848o46858-46914i46933-47001o47044-47112i47131-47199o47227-47286i;
47676 48686 CDS
ID metaerg.pl|12646
allgo_ids GO:0055085; GO:0030288; GO:0030246; GO:0034219; GO:0006974;
allko_ids K21395;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035585287.1 1 336 evalue:2.1e-178 qcov:100.00 identity:96.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:9.2e-84 score:280.4 best_domain_score:280.2 name:DctP;
sp YES;
sprot_desc 2,3-diketo-L-gulonate-binding periplasmic protein YiaO;
sprot_id sp|P37676|YIAO_ECOLI;
sprot_target db:uniprot_sprot|sp|P37676|YIAO_ECOLI 8 309 evalue:6.1e-39 qcov:89.90 identity:35.10;
tigrfam_acc TIGR00787;
tigrfam_desc TRAP transporter solute receptor, DctP family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctP;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00787 evalue:5.2e-62 score:208.7 best_domain_score:208.4 name:TIGR00787;
47676 47759 signal_peptide
ID metaerg.pl|12647
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
48754 49233 CDS
ID metaerg.pl|12648
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035562373.1 1 159 evalue:2.0e-78 qcov:100.00 identity:92.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:1.6e-30 score:105.0 best_domain_score:105.0 name:DctQ;
tm_num 4;
48754 49233 transmembrane_helix
ID metaerg.pl|12649
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i48790-48858o48886-48939i49000-49068o49126-49185i;
49223 50527 CDS
ID metaerg.pl|12650
allgo_ids GO:0016021; GO:0005886; GO:0022857; GO:0015740;
allko_ids K11690;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_009287381.1 1 434 evalue:1.2e-221 qcov:100.00 identity:97.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:9.2e-96 score:320.4 best_domain_score:320.2 name:DctM;
sprot_desc C4-dicarboxylate TRAP transporter large permease protein DctM;
sprot_id sp|Q9HU16|DCTM_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HU16|DCTM_PSEAE 29 431 evalue:1.6e-52 qcov:92.90 identity:36.20;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:1.2e-104 score:349.5 best_domain_score:349.3 name:TIGR00786;
tm_num 11;
49223 50527 transmembrane_helix
ID metaerg.pl|12651
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i49259-49327o49370-49438i49499-49567o49649-49717i49736-49804o49886-49945i49964-50023o50051-50119i50177-50245o50303-50371i50429-50497o;
50687 50926 CDS
ID metaerg.pl|12652
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086389.1 1 77 evalue:9.2e-32 qcov:97.50 identity:89.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF11391;
pfam_desc Protein of unknown function (DUF2798);
pfam_id DUF2798;
pfam_target db:Pfam-A.hmm|PF11391.8 evalue:8.6e-20 score:69.8 best_domain_score:69.2 name:DUF2798;
tm_num 2;
50687 50926 transmembrane_helix
ID metaerg.pl|12653
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i50705-50773o50816-50875i;
51281 52261 CDS
ID metaerg.pl|12654
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002966495;
genomedb_acc GCF_002966495.1;
genomedb_target db:genomedb|GCF_002966495.1|WP_009095995.1 1 326 evalue:1.1e-179 qcov:100.00 identity:96.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF09084; PF16868;
pfam_desc NMT1/THI5 like; NMT1-like family;
pfam_id NMT1; NMT1_3;
pfam_target db:Pfam-A.hmm|PF09084.11 evalue:1.1e-05 score:24.7 best_domain_score:24.2 name:NMT1; db:Pfam-A.hmm|PF16868.5 evalue:2.1e-94 score:315.4 best_domain_score:315.2 name:NMT1_3;
sp YES;
tigrfam_acc TIGR02122;
tigrfam_desc TRAP transporter solute receptor, TAXI family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TRAP_TAXI;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR02122 evalue:1.3e-105 score:351.9 best_domain_score:351.8 name:TIGR02122;
tm_num 1;
51281 51361 signal_peptide
ID metaerg.pl|12655
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
51281 52261 transmembrane_helix
ID metaerg.pl|12656
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i51293-51361o;
52437 55040 CDS
ID metaerg.pl|12657
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002966495;
genomedb_acc GCF_002966495.1;
genomedb_target db:genomedb|GCF_002966495.1|WP_009095997.1 1 864 evalue:0.0e+00 qcov:99.70 identity:90.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF06808; PF11874;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component; Domain of unknown function (DUF3394);
pfam_id DctM; DUF3394;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:4e-74 score:249.1 best_domain_score:247.3 name:DctM; db:Pfam-A.hmm|PF11874.8 evalue:3.1e-69 score:231.5 best_domain_score:230.4 name:DUF3394;
tigrfam_acc TIGR02123;
tigrfam_desc TRAP transporter, 4TM/12TM fusion protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TRAP_fused;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR02123 evalue:2.8e-213 score:709.2 best_domain_score:708.6 name:TIGR02123;
tm_num 20;
52437 55040 transmembrane_helix
ID metaerg.pl|12658
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i52545-52613o52641-52700i52737-52793o52821-52880i52899-52967o53025-53093i53172-53240o53328-53396i53415-53474o53532-53600i53634-53702o53760-53819i53838-53906o53976-54044i54081-54149o54177-54245i54264-54332o54444-54512i54549-54608o54939-54986i;
55056 55484 CDS
ID metaerg.pl|12659
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI68143.1 1 142 evalue:2.1e-66 qcov:100.00 identity:89.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.5e-26 score:92.8 best_domain_score:92.6 name:Usp;
55922 56746 CDS
ID metaerg.pl|12660
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035585275.1 1 272 evalue:9.7e-137 qcov:99.30 identity:93.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF09955;
pfam_desc Predicted integral membrane protein (DUF2189);
pfam_id DUF2189;
pfam_target db:Pfam-A.hmm|PF09955.9 evalue:3.2e-36 score:123.6 best_domain_score:123.6 name:DUF2189;
tm_num 5;
55922 56746 transmembrane_helix
ID metaerg.pl|12661
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i56057-56125o56138-56206i56306-56374o56432-56500i56585-56653o;
56897 57409 CDS
ID metaerg.pl|12662
allgo_ids GO:0042128;
allko_ids K02016;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_083571083.1 1 169 evalue:1.6e-68 qcov:99.40 identity:76.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00174;
pfam_desc Oxidoreductase molybdopterin binding domain;
pfam_id Oxidored_molyb;
pfam_target db:Pfam-A.hmm|PF00174.19 evalue:1.6e-07 score:30.3 best_domain_score:29.5 name:Oxidored_molyb;
sp YES;
56897 56968 signal_peptide
ID metaerg.pl|12663
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
57399 59636 CDS
ID metaerg.pl|12664
allgo_ids GO:0000155; GO:0007165;
allko_ids K07697; K02489; K07716; K07710; K07640; K07656; K01768; K02668; K03388; K08479; K07674; K10916; K02030; K11527; K13587; K10715; K07678; K08801; K02482; K14489; K02480; K07638; K07653; K07636; K07709; K13532; K07644; K01769; K07650; K06379; K07676; K10681; K07647; K13040; K10942; K07675; K07717; K12767; K11383; K02486; K14509; K11520; K07769; K11617; K04757; K11629; K10125; K11357; K13598; K07641; K07646; K08475; K07639; K07673; K01120; K07652; K07654; K07649; K07682; K00936; K07777; K03407; K07637; K07679; K02478; K07648; K07651; K11623; K07718; K07698; K07778; K07683; K11354; K07768; K11633; K07711; K00873; K08884; K13533; K11328; K02484; K00760; K11356; K11640; K11711; K07642; K11231; K07643; K02491; K13490; K07677; K07708; K07645; K07704; K10909; K01937; K08282;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064234254.1 1 745 evalue:0.0e+00 qcov:100.00 identity:79.30;
kegg_pathway_id 00710; 00010; 00983; 00230; 05111; 00240; 02020; 04011; 00620; 03090; 00790;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Drug metabolism - other enzymes; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system; Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF02518; PF00512; PF01627; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Hpt domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; Hpt; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.3e-30 score:105.4 best_domain_score:104.5 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.5e-20 score:72.2 best_domain_score:72.2 name:HisKA; db:Pfam-A.hmm|PF01627.23 evalue:3.7e-09 score:36.0 best_domain_score:33.4 name:Hpt; db:Pfam-A.hmm|PF00072.24 evalue:3e-26 score:91.0 best_domain_score:89.8 name:Response_reg;
tm_num 2;
57399 59636 transmembrane_helix
ID metaerg.pl|12665
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology o57462-57530i57957-58025o;
59617 60780 CDS
ID metaerg.pl|12666
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ86838.1 1 386 evalue:2.2e-187 qcov:99.70 identity:87.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF08495; PF10442;
pfam_desc FIST N domain; FIST C domain;
pfam_id FIST; FIST_C;
pfam_target db:Pfam-A.hmm|PF08495.10 evalue:3.9e-37 score:127.1 best_domain_score:124.6 name:FIST; db:Pfam-A.hmm|PF10442.9 evalue:3e-21 score:75.0 best_domain_score:63.8 name:FIST_C;
60887 62167 CDS
ID metaerg.pl|12667
allgo_ids GO:0000155; GO:0007165;
allko_ids K08282; K07704; K10909; K07677; K07708; K07645; K02491; K11231; K07643; K07642; K11711; K11640; K11356; K02484; K11328; K08884; K00873; K07711; K07768; K11633; K11354; K07778; K07718; K07651; K07648; K02478; K07679; K07637; K03407; K07682; K00936; K07649; K07654; K07652; K07673; K07639; K08475; K07646; K07641; K11357; K11629; K10125; K04757; K11520; K07769; K14509; K11383; K02486; K12767; K07717; K07675; K10942; K13040; K07647; K07676; K10681; K06379; K07650; K01769; K07644; K07709; K07636; K07638; K07653; K02480; K14489; K08801; K02482; K07678; K10715; K02030; K11527; K10916; K07674; K08479; K03388; K02668; K01768; K07656; K07640; K07710; K07716; K02489;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ86839.1 1 426 evalue:3.0e-209 qcov:100.00 identity:90.40;
kegg_pathway_id 00010; 00710; 00230; 05111; 02020; 04011; 00620; 03090; 00790;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Purine metabolism; Vibrio cholerae pathogenic cycle; Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system; Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF02518; PF00512; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:2.6e-16 score:59.4 best_domain_score:58.7 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:7.7e-11 score:41.1 best_domain_score:40.5 name:HisKA; db:Pfam-A.hmm|PF00072.24 evalue:4.5e-12 score:45.4 best_domain_score:43.8 name:Response_reg;
62864 62187 CDS
ID metaerg.pl|12668
allgo_ids GO:0006355; GO:0003677; GO:0006071; GO:0000160;
allko_ids K02491; K08282; K07677; K11640; K02484; K07642; K07778; K07768; K07652; K07641; K07646; K01120; K07673; K03407; K07654; K07682; K07675; K07647; K04757; K10125; K11357; K02486; K07644; K06379; K07676; K10715; K07653; K07636; K02482; K02480; K07710; K07716; K02668; K03388;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_022522294.1 1 225 evalue:1.5e-98 qcov:100.00 identity:86.20;
kegg_pathway_id 00230; 00790; 02020; 03090;
kegg_pathway_name Purine metabolism; Folate biosynthesis; Two-component system - General; Type II secretion system;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00196; PF00072; PF08281;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain; Sigma-70, region 4;
pfam_id GerE; Response_reg; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:1.3e-21 score:75.1 best_domain_score:74.2 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:2.4e-23 score:81.7 best_domain_score:80.7 name:Response_reg; db:Pfam-A.hmm|PF08281.12 evalue:1.7e-07 score:30.0 best_domain_score:30.0 name:Sigma70_r4_2;
sprot_desc Glycerol metabolism activator;
sprot_id sp|A8R3T0|AGMR_PSEPU;
sprot_target db:uniprot_sprot|sp|A8R3T0|AGMR_PSEPU 1 219 evalue:1.4e-50 qcov:97.30 identity:52.10;
62981 64501 CDS
ID metaerg.pl|12669
allec_ids 1.2.1.3;
allgo_ids GO:0016491; GO:0055114; GO:0004029; GO:0043878;
allko_ids K00294; K00151; K00128; K09472; K00137; K00155; K00318; K00130; K13821; K10217; K00138;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ86841.1 1 506 evalue:5.1e-293 qcov:100.00 identity:98.00;
kegg_pathway_id 00650; 00640; 00350; 00561; 00362; 00330; 00620; 00903; 00220; 00120; 00380; 00641; 00071; 00631; 00340; 00410; 00251; 00260; 00310; 00624; 00010; 00280; 00281; 00626; 00622;
kegg_pathway_name Butanoate metabolism; Propanoate metabolism; Tyrosine metabolism; Glycerolipid metabolism; Benzoate degradation via hydroxylation; Arginine and proline metabolism; Pyruvate metabolism; Limonene and pinene degradation; Urea cycle and metabolism of amino groups; Bile acid biosynthesis; Tryptophan metabolism; 3-Chloroacrylic acid degradation; Fatty acid metabolism; 1,2-Dichloroethane degradation; Histidine metabolism; beta-Alanine metabolism; Glutamate metabolism; Glycine, serine and threonine metabolism; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation; Geraniol degradation; Naphthalene and anthracene degradation; Toluene and xylene degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
metacyc_pathway_id PWY-3981; PWY-2501; NPGLUCAT-PWY; PWY-6575; PWY-6055; P221-PWY; PWY66-162; PWY66-161; PWY-2724; PWY-5760; PWY-2221; PWY-6054; PWY66-21; PWY-0;
metacyc_pathway_name β-alanine biosynthesis I;; fatty acid α-oxidation I;; Entner-Doudoroff pathway II (non-phosphorylative);; juvenile hormone III biosynthesis I;; dimethylsulfoniopropanoate biosynthesis II (Spartina);; octane oxidation;; ethanol degradation IV;; ethanol degradation III;; alkane oxidation;; β-alanine biosynthesis IV;; Entner-Doudoroff pathway III (semi-phosphorylative);; dimethylsulfoniopropanoate biosynthesis I (Wollastonia);; ethanol degradation II;; putrescine degradation III;;
metacyc_pathway_type Beta-Alanine-Biosynthesis;; Fatty-Acid-Degradation;; Entner-Duodoroff-Pathways;; HORMONE-SYN; JH-III-Biosynthesis;; Dimethylsulfoniopropionate-Biosynthesis;; Other-Degradation;; Ethanol-Degradation;; Ethanol-Degradation;; Fatty-Acid-Degradation;; Beta-Alanine-Biosynthesis;; Entner-Duodoroff-Pathways;; Dimethylsulfoniopropionate-Biosynthesis;; Ethanol-Degradation;; Putrescine-Degradation;;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:1.6e-166 score:553.7 best_domain_score:553.5 name:Aldedh;
sprot_desc Aldehyde dehydrogenase;
sprot_id sp|Q9RYG9|ALDH_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RYG9|ALDH_DEIRA 3 506 evalue:2.1e-216 qcov:99.60 identity:70.00;
64624 65652 CDS
ID metaerg.pl|12670
allec_ids 1.1.1.1;
allgo_ids GO:0055114; GO:0004022; GO:0008270;
allko_ids K00540; K13952; K07538; K13953; K00100; K13980; K00344; K01568; K00121; K00055; K00001; K13951;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000028.1_20 1 342 evalue:6.7e-196 qcov:100.00 identity:98.50;
kegg_pathway_id 00621; 00625; 00071; 00360; 00680; 00622; 00010; 00624; 00930; 00260; 00051; 00350; 00650; 00641; 00120; 00632;
kegg_pathway_name Biphenyl degradation; Tetrachloroethene degradation; Fatty acid metabolism; Phenylalanine metabolism; Methane metabolism; Toluene and xylene degradation; Glycolysis / Gluconeogenesis; 1- and 2-Methylnaphthalene degradation; Caprolactam degradation; Glycine, serine and threonine metabolism; Fructose and mannose metabolism; Tyrosine metabolism; Butanoate metabolism; 3-Chloroacrylic acid degradation; Bile acid biosynthesis; Benzoate degradation via CoA ligation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
metacyc_pathway_id P601-PWY; PWY3O-4108; PWY-5082; P461-PWY; PWY-3722; FERMENTATION-PWY; P441-PWY; PWY-5057; PWY-3801; PWY-6028; PWY-5076; PWY-5078; PWY-5079; ETOH-ACETYLCOA-ANA-PWY; P122-PWY; P161-PWY; PWY66-21; PWY-6333; PWY-5486;
metacyc_pathway_name (+)-camphor degradation;; L-tyrosine degradation III;; L-methionine degradation III;; hexitol fermentation to lactate, formate, ethanol and acetate;; glycine betaine biosynthesis II (Gram-positive bacteria);; mixed acid fermentation;; superpathway of N-acetylneuraminate degradation;; L-valine degradation II;; sucrose degradation II (sucrose synthase);; acetoin degradation;; L-leucine degradation III;; L-isoleucine degradation II;; L-phenylalanine degradation III;; ethanol degradation I;; heterolactic fermentation;; acetylene degradation (anaerobic);; ethanol degradation II;; acetaldehyde biosynthesis I;; pyruvate fermentation to ethanol II;;
metacyc_pathway_type Camphor-Degradation;; TYROSINE-DEG;; METHIONINE-DEG;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Betaine-Biosynthesis;; Fermentation-to-Acids; Pyruvate-Ethanol-Fermentation;; CARBOXYLATES-DEG; Super-Pathways;; VALINE-DEG;; SUCROSE-DEG;; Carbohydrates-Degradation;; LEUCINE-DEG;; ISOLEUCINE-DEG;; PHENYLALANINE-DEG;; Ethanol-Degradation;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Acetate-Formation; Pyruvate-Ethanol-Fermentation;; Ethanol-Degradation;; Acetaldehyde-Biosynthesis;; Pyruvate-Ethanol-Fermentation;;
pfam_acc PF08240; PF00107;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:2.4e-31 score:107.1 best_domain_score:107.1 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:5e-29 score:100.1 best_domain_score:99.4 name:ADH_zinc_N;
sprot_desc Alcohol dehydrogenase;
sprot_id sp|O31186|ADHA_RHIME;
sprot_target db:uniprot_sprot|sp|O31186|ADHA_RHIME 4 340 evalue:2.2e-129 qcov:98.50 identity:66.80;
67489 65738 CDS
ID metaerg.pl|12671
allgo_ids GO:0008272; GO:0015116; GO:0016021; GO:0005886; GO:0008271;
allko_ids K01425; K03321;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086403.1 1 583 evalue:1.9e-291 qcov:100.00 identity:93.00;
kegg_pathway_id 00471; 00910; 00251;
kegg_pathway_name D-Glutamine and D-glutamate metabolism; Nitrogen metabolism; Glutamate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF01740; PF00916;
pfam_desc STAS domain; Sulfate permease family;
pfam_id STAS; Sulfate_transp;
pfam_target db:Pfam-A.hmm|PF01740.21 evalue:7.6e-13 score:47.4 best_domain_score:46.6 name:STAS; db:Pfam-A.hmm|PF00916.20 evalue:1e-77 score:260.7 best_domain_score:260.2 name:Sulfate_transp;
sprot_desc C4-dicarboxylic acid transporter DauA;
sprot_id sp|P0AFR3|DAUA_ECO57;
sprot_target db:uniprot_sprot|sp|P0AFR3|DAUA_ECO57 14 558 evalue:4.4e-101 qcov:93.50 identity:42.70;
tm_num 10;
67489 65738 transmembrane_helix
ID metaerg.pl|12672
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i65846-65914o65927-65995i66032-66100o66128-66196i66257-66325o66368-66436i66581-66649o66692-66760i66821-66916o66974-67069i;
69691 67643 CDS
ID metaerg.pl|12673
allgo_ids GO:0016020; GO:0022857; GO:0071705; GO:0016021; GO:0005886; GO:0019285;
allko_ids K02168;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas campaniensis_A;
genomedb_acc GCF_002211105.1;
genomedb_target db:genomedb|GCF_002211105.1|WP_088698939.1 1 682 evalue:0.0e+00 qcov:100.00 identity:97.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF02028;
pfam_desc BCCT, betaine/carnitine/choline family transporter;
pfam_id BCCT;
pfam_target db:Pfam-A.hmm|PF02028.17 evalue:2.6e-178 score:592.6 best_domain_score:592.4 name:BCCT;
sprot_desc High-affinity choline transport protein;
sprot_id sp|P0ABD0|BETT_ECO57;
sprot_target db:uniprot_sprot|sp|P0ABD0|BETT_ECO57 11 670 evalue:2.5e-180 qcov:96.80 identity:50.40;
tigrfam_acc TIGR00842;
tigrfam_desc transporter, betaine/carnitine/choline transporter (BCCT) family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name bcct;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00842 evalue:1.5e-159 score:530.7 best_domain_score:530.4 name:TIGR00842;
tm_num 12;
69691 67643 transmembrane_helix
ID metaerg.pl|12674
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i67679-67747o67805-67864i67922-67990o68075-68143i68225-68293o68336-68404i68441-68500o68600-68668i68702-68758o68858-68926i69008-69076o69086-69154i;
70305 69904 CDS
ID metaerg.pl|12675
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035562410.1 2 133 evalue:7.4e-42 qcov:99.20 identity:75.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
sp YES;
69904 69984 signal_peptide
ID metaerg.pl|12676
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
70454 71413 CDS
ID metaerg.pl|12677
allgo_ids GO:0016787;
allko_ids K01432; K01730; K01181; K01303; K05968;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_009287369.1 1 315 evalue:3.8e-153 qcov:98.70 identity:85.40;
kegg_pathway_id 00040; 00380; 00630;
kegg_pathway_name Pentose and glucuronate interconversions; Tryptophan metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF07859; PF00135; PF01738; PF00326;
pfam_desc alpha/beta hydrolase fold; Carboxylesterase family; Dienelactone hydrolase family; Prolyl oligopeptidase family;
pfam_id Abhydrolase_3; COesterase; DLH; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF07859.13 evalue:8.9e-16 score:57.6 best_domain_score:54.9 name:Abhydrolase_3; db:Pfam-A.hmm|PF00135.28 evalue:1e-05 score:23.9 best_domain_score:21.1 name:COesterase; db:Pfam-A.hmm|PF01738.18 evalue:2.2e-05 score:23.3 best_domain_score:12.3 name:DLH; db:Pfam-A.hmm|PF00326.21 evalue:1.2e-11 score:43.7 best_domain_score:34.2 name:Peptidase_S9;
sp YES;
70454 70555 lipoprotein_signal_peptide
ID metaerg.pl|12678
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
71535 72548 CDS
ID metaerg.pl|12679
allgo_ids GO:0042597;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas nigrificans;
genomedb_acc GCF_002374315.1;
genomedb_target db:genomedb|GCF_002374315.1|WP_096652904.1 1 337 evalue:3.0e-172 qcov:100.00 identity:91.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF03401;
pfam_desc Tripartite tricarboxylate transporter family receptor;
pfam_id TctC;
pfam_target db:Pfam-A.hmm|PF03401.14 evalue:1e-17 score:63.3 best_domain_score:62.7 name:TctC;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P0A177|YCLC_PSEPU;
sprot_target db:uniprot_sprot|sp|P0A177|YCLC_PSEPU 29 303 evalue:1.8e-14 qcov:81.60 identity:27.20;
tm_num 1;
71535 71639 signal_peptide
ID metaerg.pl|12680
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
71535 72548 transmembrane_helix
ID metaerg.pl|12681
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i71568-71636o;
72620 73069 CDS
ID metaerg.pl|12682
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086408.1 1 149 evalue:2.8e-66 qcov:100.00 identity:93.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF07331;
pfam_desc Tripartite tricarboxylate transporter TctB family;
pfam_id TctB;
pfam_target db:Pfam-A.hmm|PF07331.11 evalue:1.2e-12 score:47.5 best_domain_score:47.1 name:TctB;
tm_num 4;
72620 73069 transmembrane_helix
ID metaerg.pl|12683
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology o72650-72718i72731-72799o72878-72946i72965-73033o;
73079 74590 CDS
ID metaerg.pl|12684
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078086409.1 1 503 evalue:2.9e-264 qcov:100.00 identity:97.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF01970;
pfam_desc Tripartite tricarboxylate transporter TctA family;
pfam_id TctA;
pfam_target db:Pfam-A.hmm|PF01970.16 evalue:3.8e-112 score:374.2 best_domain_score:373.8 name:TctA;
sprot_desc Uncharacterized 52.8 kDa protein in TAR-I ttuC' 3'region;
sprot_id sp|P70795|YZ2R_AGRVI;
sprot_target db:uniprot_sprot|sp|P70795|YZ2R_AGRVI 46 479 evalue:4.8e-48 qcov:86.30 identity:30.80;
tm_num 12;
73079 74590 transmembrane_helix
ID metaerg.pl|12685
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology i73115-73183o73211-73279i73298-73366o73409-73477i73496-73564o73592-73651i73838-73906o74030-74098i74159-74227o74255-74323i74357-74425o74468-74536i;
76048 74666 CDS
ID metaerg.pl|12686
allgo_ids GO:0000155; GO:0007165;
allko_ids K07650; K07676; K10681; K06379; K01769; K07644; K07709; K04757; K11357; K11629; K10125; K11383; K02486; K12767; K07769; K11520; K14509; K07717; K07675; K07647; K13040; K10942; K07674; K08479; K10916; K02668; K03388; K07710; K07640; K01768; K07656; K07697; K02489; K07716; K07638; K07653; K07636; K08801; K02482; K02480; K07678; K10715; K13587; K11527; K02030; K07642; K11711; K11356; K11640; K02484; K07704; K08282; K07708; K07677; K07645; K02491; K11231; K07643; K03407; K07637; K07654; K07777; K00936; K07649; K07682; K07652; K07646; K07641; K13598; K07673; K08475; K07639; K08884; K07711; K11328; K13533; K07683; K07778; K07768; K11633; K07651; K07698; K07718; K02478; K07679; K07648;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_009287365.1 1 459 evalue:4.2e-217 qcov:99.80 identity:85.60;
kegg_pathway_id 02020; 04011; 03090; 00230; 05111; 00790;
kegg_pathway_name Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system; Purine metabolism; Vibrio cholerae pathogenic cycle; Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF08521; PF02518; PF14501; PF00512;
pfam_desc Two-component sensor kinase N-terminal; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GHKL domain; His Kinase A (phospho-acceptor) domain;
pfam_id 2CSK_N; HATPase_c; HATPase_c_5; HisKA;
pfam_target db:Pfam-A.hmm|PF08521.10 evalue:3.7e-27 score:94.3 best_domain_score:93.3 name:2CSK_N; db:Pfam-A.hmm|PF02518.26 evalue:6.8e-15 score:54.8 best_domain_score:53.8 name:HATPase_c; db:Pfam-A.hmm|PF14501.6 evalue:2.6e-05 score:23.3 best_domain_score:22.3 name:HATPase_c_5; db:Pfam-A.hmm|PF00512.25 evalue:5.2e-11 score:41.7 best_domain_score:40.5 name:HisKA;
tm_num 2;
76048 74666 transmembrane_helix
ID metaerg.pl|12687
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
topology o74702-74770i75143-75211o;
76748 76041 CDS
ID metaerg.pl|12688
allgo_ids GO:0000160; GO:0005829; GO:0032993; GO:0001216; GO:0003700; GO:0000156; GO:0000976;
allko_ids K08884; K07711; K11354; K07778; K02575; K07768; K07651; K07718; K02478; K07679; K07648; K03407; K07637; K07654; K07682; K07652; K07646; K07641; K01120; K07673; K08475; K07639; K07704; K10909; K08282; K01937; K07677; K07645; K07708; K13490; K02491; K11231; K07642; K11711; K11356; K11640; K02484; K00760; K07638; K07653; K07636; K02482; K02480; K07678; K10715; K11527; K08479; K10916; K02668; K03388; K07710; K07640; K01768; K02489; K07716; K04757; K11357; K10125; K13761; K02486; K11383; K12767; K07769; K07717; K07675; K07647; K07650; K07676; K10681; K06379; K07644; K07709; K07666;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007113739.1 1 235 evalue:4.1e-112 qcov:100.00 identity:90.20;
kegg_pathway_id 00983; 05111; 00230; 00240; 02020; 04011; 03090; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system; Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.00378259; 23.894; 0.00191738; 23.8997; ;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:5.5e-28 score:96.6 best_domain_score:96.0 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:5e-16 score:57.8 best_domain_score:56.8 name:Trans_reg_C;
sprot_desc Transcriptional regulatory protein QseB;
sprot_id sp|P45337|QSEB_HAEIN;
sprot_target db:uniprot_sprot|sp|P45337|QSEB_HAEIN 1 217 evalue:6.6e-40 qcov:92.30 identity:37.80;
>Feature NODE_99_length_76289_cov_7.62803
300 1184 CDS
ID metaerg.pl|12689
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000034.1_42 8 294 evalue:3.1e-88 qcov:97.60 identity:59.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00561; PF12697; PF00756; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Putative esterase; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Esterase; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:1.9e-14 score:53.1 best_domain_score:52.7 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:8.7e-17 score:61.7 best_domain_score:61.4 name:Abhydrolase_6; db:Pfam-A.hmm|PF00756.20 evalue:3.3e-05 score:22.9 best_domain_score:19.9 name:Esterase; db:Pfam-A.hmm|PF12146.8 evalue:8e-11 score:40.9 best_domain_score:40.1 name:Hydrolase_4;
1347 2711 CDS
ID metaerg.pl|12690
allec_ids 4.2.3.1;
allgo_ids GO:0030170; GO:0004795; GO:0009088;
allko_ids K01733;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000072.1_24 1 453 evalue:6.7e-159 qcov:99.80 identity:63.10;
kegg_pathway_id 00260; 00750;
kegg_pathway_name Glycine, serine and threonine metabolism; Vitamin B6 metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metacyc_pathway_id PWY0-781; THRESYN-PWY; PWY-724; HOMOSER-THRESYN-PWY; P4-PWY; PWY-3001;
metacyc_pathway_name aspartate superpathway;; superpathway of L-threonine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-threonine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-isoleucine biosynthesis I;;
metacyc_pathway_type Super-Pathways;; Super-Pathways; THREONINE-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; THREONINE-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;;
pfam_acc PF00291; PF14821;
pfam_desc Pyridoxal-phosphate dependent enzyme; Threonine synthase N terminus;
pfam_id PALP; Thr_synth_N;
pfam_target db:Pfam-A.hmm|PF00291.25 evalue:4.9e-16 score:58.2 best_domain_score:55.3 name:PALP; db:Pfam-A.hmm|PF14821.6 evalue:5.3e-28 score:96.3 best_domain_score:95.0 name:Thr_synth_N;
sprot_desc Threonine synthase;
sprot_id sp|P29363|THRC_PSEAE;
sprot_target db:uniprot_sprot|sp|P29363|THRC_PSEAE 1 452 evalue:6.4e-116 qcov:99.60 identity:48.30;
tigrfam_acc TIGR00260;
tigrfam_desc threonine synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name thrC;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00260 evalue:1.2e-81 score:273.7 best_domain_score:273.2 name:TIGR00260;
3882 2737 CDS
ID metaerg.pl|12691
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Aquisalimonadaceae;g__Aquisalimonas;s__Aquisalimonas asiatica;
genomedb_acc GCF_900110585.1;
genomedb_target db:genomedb|GCF_900110585.1|WP_091639342.1 10 367 evalue:4.3e-111 qcov:94.00 identity:61.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:5.2e-46 score:156.5 best_domain_score:156.2 name:AI-2E_transport;
sprot_desc Putative transport protein YueF;
sprot_id sp|O32095|YUEF_BACSU;
sprot_target db:uniprot_sprot|sp|O32095|YUEF_BACSU 20 363 evalue:3.8e-13 qcov:90.30 identity:23.00;
tm_num 8;
3882 2737 transmembrane_helix
ID metaerg.pl|12692
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology i2794-2862o2872-2940i2977-3045o3220-3288i3421-3489o3502-3570i3589-3657o3700-3795i;
4032 5480 CDS
ID metaerg.pl|12693
genomedb_OC d__Bacteria;p__Desulfobacterota;c__Desulfobulbia;o__Desulfobulbales;f__Desulfobulbaceae;g__Desulfobulbus_A;s__Desulfobulbus_A mediterraneus;
genomedb_acc GCF_000429965.1;
genomedb_target db:genomedb|GCF_000429965.1|WP_028585287.1 53 480 evalue:5.0e-128 qcov:88.80 identity:51.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF13535;
pfam_desc ATP-grasp domain;
pfam_id ATP-grasp_4;
pfam_target db:Pfam-A.hmm|PF13535.6 evalue:5.9e-09 score:34.9 best_domain_score:33.6 name:ATP-grasp_4;
5480 7519 CDS
ID metaerg.pl|12694
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A denitrificans;
genomedb_acc GCF_002000365.1;
genomedb_target db:genomedb|GCF_002000365.1|WP_077277595.1 8 679 evalue:1.3e-280 qcov:99.00 identity:66.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00561; PF02129; PF08530;
pfam_desc alpha/beta hydrolase fold; X-Pro dipeptidyl-peptidase (S15 family); X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain;
pfam_id Abhydrolase_1; Peptidase_S15; PepX_C;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:1.3e-07 score:30.8 best_domain_score:29.5 name:Abhydrolase_1; db:Pfam-A.hmm|PF02129.18 evalue:7.7e-62 score:208.5 best_domain_score:208.1 name:Peptidase_S15; db:Pfam-A.hmm|PF08530.10 evalue:7.8e-57 score:192.0 best_domain_score:191.5 name:PepX_C;
tigrfam_acc TIGR00976;
tigrfam_desc hydrolase CocE/NonD family protein;
tigrfam_mainrole Unknown function;
tigrfam_name /NonD;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR00976 evalue:3.8e-70 score:236.6 best_domain_score:234.8 name:TIGR00976;
7578 8744 CDS
ID metaerg.pl|12695
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468392.1 8 377 evalue:7.1e-85 qcov:95.40 identity:48.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
tm_num 3;
7578 8744 transmembrane_helix
ID metaerg.pl|12696
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology i7737-7805o7863-7931i8199-8267o;
9445 9627 CDS
ID metaerg.pl|12697
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__SCGC-AAA027-K21;s__SCGC-AAA027-K21 sp002422175;
genomedb_acc GCA_002422175.1;
genomedb_target db:genomedb|GCA_002422175.1|DITR01000062.1_6 1 60 evalue:3.3e-21 qcov:100.00 identity:88.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
tm_num 2;
9445 9627 transmembrane_helix
ID metaerg.pl|12698
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology i9463-9522o9550-9618i;
10028 10741 CDS
ID metaerg.pl|12699
allec_ids 1.10.3.11;
allgo_ids GO:0009916; GO:0055114; GO:0016021; GO:0005743; GO:0005739; GO:0070469; GO:0046872; GO:0102721; GO:0010230;
allko_ids K17893;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__SW121;s__SW121 sp003259155;
genomedb_acc GCF_003259155.1;
genomedb_target db:genomedb|GCF_003259155.1|WP_111640507.1 6 206 evalue:4.1e-91 qcov:84.80 identity:80.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF01786;
pfam_desc Alternative oxidase;
pfam_id AOX;
pfam_target db:Pfam-A.hmm|PF01786.17 evalue:1.4e-81 score:272.5 best_domain_score:272.2 name:AOX;
sprot_desc Ubiquinol oxidase 2, mitochondrial;
sprot_id sp|Q41266|AOX2_SOYBN;
sprot_target db:uniprot_sprot|sp|Q41266|AOX2_SOYBN 12 207 evalue:8.9e-69 qcov:82.70 identity:62.20;
tm_num 2;
10028 10741 transmembrane_helix
ID metaerg.pl|12700
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology i10172-10225o10346-10414i;
11411 10716 CDS
ID metaerg.pl|12701
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp003476445;
genomedb_acc GCA_003476445.1;
genomedb_target db:genomedb|GCA_003476445.1|HAR31889.1 7 224 evalue:2.1e-55 qcov:94.40 identity:53.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metabolic_acc TIGR01428;
metabolic_process compound:Halogenated compounds;process:Halogenated compounds breakdown;gene:Haloacid dehydrogenase;;
metabolic_target db:metabolic.hmm|TIGR01428 evalue:6.2e-26 score:90.8 best_domain_score:90.4 name:TIGR01428;
pfam_acc PF13419; PF00702; PF13242;
pfam_desc Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD_2; Hydrolase; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:5.1e-19 score:68.3 best_domain_score:65.7 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:1.9e-10 score:40.6 best_domain_score:39.4 name:Hydrolase; db:Pfam-A.hmm|PF13242.6 evalue:2.6e-12 score:45.9 best_domain_score:45.1 name:Hydrolase_like;
tigrfam_acc TIGR01509; TIGR01549;
tigrfam_desc HAD hydrolase, family IA, variant 3; HAD hydrolase, family IA, variant 1;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name HAD-SF-IA-v3; HAD-SF-IA-v1;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:5e-12 score:45.4 best_domain_score:42.5 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01549 evalue:2.1e-16 score:59.8 best_domain_score:50.9 name:TIGR01549;
12394 11408 CDS
ID metaerg.pl|12702
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0005737; GO:0009037; GO:0007049; GO:0051301; GO:0007059; GO:0006313;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Thiohalobacterales;f__Thiohalobacteraceae;g__Thiohalobacter;s__Thiohalobacter thiocyanaticus;
genomedb_acc GCF_002356355.1;
genomedb_target db:genomedb|GCF_002356355.1|WP_096364037.1 23 321 evalue:5.3e-89 qcov:91.20 identity:60.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00589; PF02899;
pfam_desc Phage integrase family; Phage integrase, N-terminal SAM-like domain;
pfam_id Phage_integrase; Phage_int_SAM_1;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:1.4e-37 score:128.3 best_domain_score:127.7 name:Phage_integrase; db:Pfam-A.hmm|PF02899.17 evalue:1.2e-18 score:66.4 best_domain_score:63.2 name:Phage_int_SAM_1;
sprot_desc Tyrosine recombinase XerC;
sprot_id sp|Q8VS06|XERC_PSEFL;
sprot_target db:uniprot_sprot|sp|Q8VS06|XERC_PSEFL 23 324 evalue:3.3e-82 qcov:92.10 identity:55.30;
tigrfam_acc TIGR02224;
tigrfam_desc tyrosine recombinase XerC;
tigrfam_mainrole DNA metabolism;
tigrfam_name recomb_XerC;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02224 evalue:1.8e-102 score:341.9 best_domain_score:341.7 name:TIGR02224;
13137 12391 CDS
ID metaerg.pl|12703
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax sp002337465;
genomedb_acc GCA_002337465.1;
genomedb_target db:genomedb|GCA_002337465.1|DDGB01000026.1_33 16 239 evalue:1.3e-36 qcov:90.30 identity:44.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF04340;
pfam_desc Protein of unknown function, DUF484;
pfam_id DUF484;
pfam_target db:Pfam-A.hmm|PF04340.12 evalue:5.3e-47 score:159.6 best_domain_score:159.2 name:DUF484;
13976 13134 CDS
ID metaerg.pl|12704
allec_ids 5.1.1.7;
allgo_ids GO:0008837; GO:0009089; GO:0005737;
allko_ids K01778;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Cellvibrionaceae;g__Microbulbifer;s__Microbulbifer agarilyticus_B;
genomedb_acc GCF_000220505.1;
genomedb_target db:genomedb|GCF_000220505.1|WP_010133731.1 1 280 evalue:1.9e-87 qcov:100.00 identity:56.40;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metacyc_pathway_id DAPLYSINESYN-PWY; PWY-724; PWY0-781; P4-PWY; PWY-5097; PWY-2941;
metacyc_pathway_name L-lysine biosynthesis I;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; aspartate superpathway;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; L-lysine biosynthesis VI;; L-lysine biosynthesis II;;
metacyc_pathway_type LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;; LYSINE-SYN;;
pfam_acc PF01678;
pfam_desc Diaminopimelate epimerase;
pfam_id DAP_epimerase;
pfam_target db:Pfam-A.hmm|PF01678.19 evalue:2.7e-58 score:194.6 best_domain_score:104.3 name:DAP_epimerase;
sprot_desc Diaminopimelate epimerase;
sprot_id sp|Q2SQ64|DAPF_HAHCH;
sprot_target db:uniprot_sprot|sp|Q2SQ64|DAPF_HAHCH 1 278 evalue:1.0e-84 qcov:99.30 identity:54.00;
tigrfam_acc TIGR00652;
tigrfam_desc diaminopimelate epimerase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name DapF;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00652 evalue:5.9e-86 score:287.4 best_domain_score:287.2 name:TIGR00652;
15264 13984 CDS
ID metaerg.pl|12705
allec_ids 4.1.1.20;
allgo_ids GO:0003824; GO:0008836; GO:0030170; GO:0009089;
allko_ids K01581; K01586; K12526;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Marinobacter;s__Marinobacter sp002563885;
genomedb_acc GCF_002563885.1;
genomedb_target db:genomedb|GCF_002563885.1|WP_098419742.1 7 421 evalue:9.1e-134 qcov:97.40 identity:61.40;
kegg_pathway_id 00220; 00480; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Glutathione metabolism; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metacyc_pathway_id PWY0-781; PWY-724; DAPLYSINESYN-PWY; PWY-2941; P4-PWY; PWY-5097;
metacyc_pathway_name aspartate superpathway;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-lysine biosynthesis I;; L-lysine biosynthesis II;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; L-lysine biosynthesis VI;;
metacyc_pathway_type Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;; LYSINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; LYSINE-SYN;;
pfam_acc PF01168; PF02784; PF00278;
pfam_desc Alanine racemase, N-terminal domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; Pyridoxal-dependent decarboxylase, C-terminal sheet domain;
pfam_id Ala_racemase_N; Orn_Arg_deC_N; Orn_DAP_Arg_deC;
pfam_target db:Pfam-A.hmm|PF01168.20 evalue:1.6e-08 score:33.7 best_domain_score:33.0 name:Ala_racemase_N; db:Pfam-A.hmm|PF02784.16 evalue:6.5e-72 score:241.1 best_domain_score:240.7 name:Orn_Arg_deC_N; db:Pfam-A.hmm|PF00278.22 evalue:6.4e-28 score:96.1 best_domain_score:95.8 name:Orn_DAP_Arg_deC;
sprot_desc Diaminopimelate decarboxylase;
sprot_id sp|P19572|DCDA_PSEAE;
sprot_target db:uniprot_sprot|sp|P19572|DCDA_PSEAE 7 424 evalue:5.2e-128 qcov:98.10 identity:59.80;
tigrfam_acc TIGR01048;
tigrfam_desc diaminopimelate decarboxylase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name lysA;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01048 evalue:2.1e-156 score:519.8 best_domain_score:519.5 name:TIGR01048;
16904 15504 CDS
ID metaerg.pl|12706
allec_ids 4.3.2.1;
allgo_ids GO:0005737; GO:0004056; GO:0042450;
allko_ids K01679; K01744; K01756; K01857; K01755;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrosococcales;f__Nitrosococcaceae;g__Nitrosococcus;s__Nitrosococcus oceani;
genomedb_acc GCF_000012805.1;
genomedb_target db:genomedb|GCF_000012805.1|WP_002814263.1 7 460 evalue:1.3e-194 qcov:97.40 identity:76.40;
kegg_pathway_id 00230; 00020; 00720; 00910; 00362; 00330; 00252; 00220;
kegg_pathway_name Purine metabolism; Citrate cycle (TCA cycle); Reductive carboxylate cycle (CO2 fixation); Nitrogen metabolism; Benzoate degradation via hydroxylation; Arginine and proline metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metacyc_pathway_id PWY-5154; PWY-4983; ARGSYN-PWY; ARGSYNBSUB-PWY; ARGININE-SYN4-PWY; ARG+POLYAMINE-SYN; PWY-5; PWY-4984; PWY-5004;
metacyc_pathway_name L-arginine biosynthesis III (via N-acetyl-L-citrulline);; nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis II;; superpathway of arginine and polyamine biosynthesis;; canavanine biosynthesis;; urea cycle;; superpathway of L-citrulline metabolism;;
metacyc_pathway_type ARGININE-SYN;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; NITROGEN-DEG;; Citrulline-Biosynthesis; Super-Pathways;;
pfam_acc PF14698; PF00206;
pfam_desc Argininosuccinate lyase C-terminal; Lyase;
pfam_id ASL_C2; Lyase_1;
pfam_target db:Pfam-A.hmm|PF14698.6 evalue:1.4e-26 score:92.3 best_domain_score:91.2 name:ASL_C2; db:Pfam-A.hmm|PF00206.20 evalue:3.5e-83 score:278.8 best_domain_score:278.5 name:Lyase_1;
sprot_desc Argininosuccinate lyase;
sprot_id sp|Q3JDS2|ARLY_NITOC;
sprot_target db:uniprot_sprot|sp|Q3JDS2|ARLY_NITOC 7 460 evalue:9.9e-197 qcov:97.40 identity:76.40;
tigrfam_acc TIGR00838;
tigrfam_desc argininosuccinate lyase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argH;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00838 evalue:4.4e-191 score:634.9 best_domain_score:634.8 name:TIGR00838;
17142 18233 CDS
ID metaerg.pl|12707
allgo_ids GO:0000155; GO:0000160; GO:0016021;
allko_ids K02478; K07718; K07704; K08082;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000072.1_16 1 359 evalue:1.9e-95 qcov:98.90 identity:56.50;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF06580;
pfam_desc Histidine kinase;
pfam_id His_kinase;
pfam_target db:Pfam-A.hmm|PF06580.13 evalue:1.7e-25 score:88.4 best_domain_score:87.6 name:His_kinase;
tm_num 4;
17142 18233 transmembrane_helix
ID metaerg.pl|12708
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology i17199-17267o17310-17369i17388-17456o17541-17609i;
18440 19186 CDS
ID metaerg.pl|12709
allgo_ids GO:0003677; GO:0032993; GO:0001216; GO:0001217; GO:0043565; GO:0000976; GO:0042121; GO:0071978; GO:0045892; GO:0000160; GO:2000147; GO:1900192; GO:0045893; GO:1901031; GO:0006355; GO:0043107;
allko_ids K02668; K03388; K08479; K10916; K02489; K07716; K07710; K02482; K02480; K07653; K07636; K11527; K10715; K07678; K06379; K10681; K07676; K07644; K12767; K02486; K11383; K04757; K10125; K11357; K07647; K07675; K07717; K07654; K07682; K03407; K07641; K07646; K07639; K07673; K01120; K07652; K07778; K11354; K07711; K07679; K07648; K07718; K11711; K07642; K02484; K11640; K07708; K07677; K08282; K11231; K08083;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000072.1_15 1 248 evalue:5.7e-88 qcov:100.00 identity:66.50;
kegg_pathway_id 00230; 05111; 00790; 03090; 02020; 04011;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Folate biosynthesis; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF04397; PF00072;
pfam_desc LytTr DNA-binding domain; Response regulator receiver domain;
pfam_id LytTR; Response_reg;
pfam_target db:Pfam-A.hmm|PF04397.15 evalue:7.4e-22 score:76.6 best_domain_score:75.5 name:LytTR; db:Pfam-A.hmm|PF00072.24 evalue:4.8e-26 score:90.4 best_domain_score:89.8 name:Response_reg;
sprot_desc Positive alginate biosynthesis regulatory protein;
sprot_id sp|P26275|ALGR_PSEAE;
sprot_target db:uniprot_sprot|sp|P26275|ALGR_PSEAE 1 248 evalue:4.5e-71 qcov:100.00 identity:57.50;
19217 20158 CDS
ID metaerg.pl|12710
allec_ids 2.5.1.61;
allgo_ids GO:0004418; GO:0033014; GO:0018160; GO:0006782;
allko_ids K01749;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Salinicola;s__Salinicola sp003206575;
genomedb_acc GCF_003206575.1;
genomedb_target db:genomedb|GCF_003206575.1|WP_110674100.1 4 306 evalue:3.3e-88 qcov:96.80 identity:58.90;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metacyc_pathway_id PWY-5189; PWY-5529; PWY-5920; PWY-5918; PWY-5188;
metacyc_pathway_name tetrapyrrole biosynthesis II (from glycine);; superpathway of bacteriochlorophyll a biosynthesis;; superpathway of b heme biosynthesis from glycine;; superpathay of heme b biosynthesis from glutamate;; tetrapyrrole biosynthesis I (from glutamate);;
metacyc_pathway_type Tetrapyrrole-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Tetrapyrrole-Biosynthesis;;
pfam_acc PF01379; PF03900;
pfam_desc Porphobilinogen deaminase, dipyromethane cofactor binding domain; Porphobilinogen deaminase, C-terminal domain;
pfam_id Porphobil_deam; Porphobil_deamC;
pfam_target db:Pfam-A.hmm|PF01379.20 evalue:3e-77 score:258.0 best_domain_score:257.7 name:Porphobil_deam; db:Pfam-A.hmm|PF03900.15 evalue:4.3e-19 score:67.9 best_domain_score:67.1 name:Porphobil_deamC;
sprot_desc Porphobilinogen deaminase;
sprot_id sp|Q02EA3|HEM3_PSEAB;
sprot_target db:uniprot_sprot|sp|Q02EA3|HEM3_PSEAB 1 305 evalue:4.3e-87 qcov:97.40 identity:57.70;
tigrfam_acc TIGR00212;
tigrfam_desc hydroxymethylbilane synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name hemC;
tigrfam_sub1role Heme, porphyrin, and cobalamin;
tigrfam_target db:TIGRFAMs.hmm|TIGR00212 evalue:2.6e-102 score:341.0 best_domain_score:340.8 name:TIGR00212;
20162 20929 CDS
ID metaerg.pl|12711
allec_ids 4.2.1.75;
allgo_ids GO:0004852; GO:0033014; GO:0006782; GO:0006780;
allko_ids K01719;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas citronellolis;
genomedb_acc GCF_900112375.1;
genomedb_target db:genomedb|GCF_900112375.1|WP_074978050.1 5 236 evalue:7.1e-33 qcov:91.00 identity:45.10;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metacyc_pathway_id PWY-5918; PWY-5920; PWY-5188; PWY-5189; PWY-5529;
metacyc_pathway_name superpathay of heme b biosynthesis from glutamate;; superpathway of b heme biosynthesis from glycine;; tetrapyrrole biosynthesis I (from glutamate);; tetrapyrrole biosynthesis II (from glycine);; superpathway of bacteriochlorophyll a biosynthesis;;
metacyc_pathway_type Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Tetrapyrrole-Biosynthesis;; Tetrapyrrole-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;;
pfam_acc PF02602;
pfam_desc Uroporphyrinogen-III synthase HemD;
pfam_id HEM4;
pfam_target db:Pfam-A.hmm|PF02602.15 evalue:1.2e-33 score:115.6 best_domain_score:115.3 name:HEM4;
sprot_desc Uroporphyrinogen-III synthase;
sprot_id sp|P48246|HEM4_PSEAE;
sprot_target db:uniprot_sprot|sp|P48246|HEM4_PSEAE 5 238 evalue:3.6e-31 qcov:91.80 identity:41.10;
20926 22380 CDS
ID metaerg.pl|12712
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000002.1_20 60 479 evalue:1.5e-31 qcov:86.80 identity:36.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF04375;
pfam_desc HemX, putative uroporphyrinogen-III C-methyltransferase;
pfam_id HemX;
pfam_target db:Pfam-A.hmm|PF04375.14 evalue:8.3e-45 score:152.8 best_domain_score:150.8 name:HemX;
tm_num 1;
20926 22380 transmembrane_helix
ID metaerg.pl|12713
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology i21172-21240o;
22377 23657 CDS
ID metaerg.pl|12714
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000006.1_27 6 405 evalue:4.2e-62 qcov:93.90 identity:41.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF07219; PF14559;
pfam_desc HemY protein N-terminus; Tetratricopeptide repeat;
pfam_id HemY_N; TPR_19;
pfam_target db:Pfam-A.hmm|PF07219.13 evalue:3.4e-24 score:84.3 best_domain_score:80.3 name:HemY_N; db:Pfam-A.hmm|PF14559.6 evalue:5e-07 score:29.4 best_domain_score:19.0 name:TPR_19;
tigrfam_acc TIGR00540;
tigrfam_desc heme biosynthesis-associated TPR protein;
tigrfam_mainrole Unknown function;
tigrfam_name TPR_hemY_coli;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00540 evalue:1.2e-75 score:253.9 best_domain_score:253.7 name:TIGR00540;
tm_num 2;
22377 23657 transmembrane_helix
ID metaerg.pl|12715
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology i22389-22448o22506-22574i;
24501 23749 CDS
ID metaerg.pl|12716
allec_ids 1.14.12.15;
allgo_ids GO:0016491; GO:0055114; GO:0051537; GO:0009055; GO:0071949; GO:0046872; GO:0070402; GO:0018628; GO:0018963;
allko_ids K00380; K00235; K00245; K14581; K00240; K00529;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas urumqiensis;
genomedb_acc GCF_003028575.1;
genomedb_target db:genomedb|GCF_003028575.1|WP_102588001.1 10 248 evalue:3.9e-28 qcov:95.60 identity:32.80;
kegg_pathway_id 02020; 00650; 00360; 00190; 00071; 05012; 00920; 00720; 00020; 00632;
kegg_pathway_name Two-component system - General; Butanoate metabolism; Phenylalanine metabolism; Oxidative phosphorylation; Fatty acid metabolism; Parkinson's disease; Sulfur metabolism; Reductive carboxylate cycle (CO2 fixation); Citrate cycle (TCA cycle); Benzoate degradation via CoA ligation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00175;
pfam_desc Oxidoreductase NAD-binding domain;
pfam_id NAD_binding_1;
pfam_target db:Pfam-A.hmm|PF00175.21 evalue:2.9e-17 score:62.5 best_domain_score:62.0 name:NAD_binding_1;
sprot_desc Terephthalate 1,2-dioxygenase, reductase component 1;
sprot_id sp|Q3C1E0|TPDR1_COMSP;
sprot_target db:uniprot_sprot|sp|Q3C1E0|TPDR1_COMSP 34 240 evalue:2.8e-20 qcov:82.80 identity:32.50;
25804 24512 CDS
ID metaerg.pl|12717
allec_ids 3.6.4.-;
allgo_ids GO:0005524; GO:0004386; GO:0003723; GO:0008186; GO:0006353;
allko_ids K03628;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000002.1_17 11 429 evalue:5.3e-214 qcov:97.40 identity:90.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00006; PF07498; PF07497;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain;
pfam_id ATP-synt_ab; Rho_N; Rho_RNA_bind;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:3.8e-24 score:84.8 best_domain_score:84.3 name:ATP-synt_ab; db:Pfam-A.hmm|PF07498.12 evalue:8.4e-17 score:60.1 best_domain_score:58.7 name:Rho_N; db:Pfam-A.hmm|PF07497.12 evalue:8e-32 score:108.2 best_domain_score:106.4 name:Rho_RNA_bind;
sprot_desc Transcription termination factor Rho;
sprot_id sp|Q9HTV1|RHO_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HTV1|RHO_PSEAE 11 427 evalue:8.2e-198 qcov:97.00 identity:82.30;
tigrfam_acc TIGR00767;
tigrfam_desc transcription termination factor Rho;
tigrfam_mainrole Transcription;
tigrfam_name rho;
tigrfam_sub1role Transcription factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00767 evalue:5.1e-213 score:706.6 best_domain_score:706.4 name:TIGR00767;
26499 26173 CDS
ID metaerg.pl|12718
allgo_ids GO:0045454; GO:0005737; GO:0005829; GO:0016671; GO:0015035; GO:0047134; GO:0006662;
allko_ids K03671;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000002.1_16 1 108 evalue:7.6e-45 qcov:100.00 identity:79.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00085; PF13098; PF13905; PF13728;
pfam_desc Thioredoxin; Thioredoxin-like domain; Thioredoxin-like; F plasmid transfer operon protein;
pfam_id Thioredoxin; Thioredoxin_2; Thioredoxin_8; TraF;
pfam_target db:Pfam-A.hmm|PF00085.20 evalue:6.2e-36 score:121.8 best_domain_score:121.6 name:Thioredoxin; db:Pfam-A.hmm|PF13098.6 evalue:2e-09 score:37.1 best_domain_score:33.2 name:Thioredoxin_2; db:Pfam-A.hmm|PF13905.6 evalue:5.9e-09 score:35.4 best_domain_score:28.7 name:Thioredoxin_8; db:Pfam-A.hmm|PF13728.6 evalue:1.2e-05 score:24.5 best_domain_score:24.1 name:TraF;
sprot_desc Thioredoxin;
sprot_id sp|Q9X2T1|THIO_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9X2T1|THIO_PSEAE 1 108 evalue:1.4e-42 qcov:100.00 identity:69.40;
tigrfam_acc TIGR01068;
tigrfam_desc thioredoxin;
tigrfam_mainrole Energy metabolism;
tigrfam_name thioredoxin;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01068 evalue:8.4e-41 score:137.4 best_domain_score:137.3 name:TIGR01068;
26642 28171 CDS
ID metaerg.pl|12719
allec_ids 3.6.1.11;
allgo_ids GO:0005886; GO:0004309; GO:0008976; GO:0071978; GO:0071977; GO:0006995; GO:0016036; GO:0009247; GO:0009405; GO:0006793; GO:0006798; GO:0009372; GO:0044010;
allko_ids K01514; K01524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Marichromatium;s__Marichromatium gracile;
genomedb_acc GCF_001583505.1;
genomedb_target db:genomedb|GCF_001583505.1|WP_062277506.1 9 502 evalue:9.3e-85 qcov:97.10 identity:41.00;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF01966; PF02541;
pfam_desc HD domain; Ppx/GppA phosphatase family;
pfam_id HD; Ppx-GppA;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:0.00012 score:21.6 best_domain_score:20.6 name:HD; db:Pfam-A.hmm|PF02541.16 evalue:1.1e-46 score:158.8 best_domain_score:158.4 name:Ppx-GppA;
sprot_desc Exopolyphosphatase;
sprot_id sp|Q9ZN70|PPX_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9ZN70|PPX_PSEAE 23 502 evalue:2.8e-72 qcov:94.30 identity:36.20;
29191 28250 CDS
ID metaerg.pl|12720
allgo_ids GO:0008146;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Spirulinaceae;g__Spirulina;s__Spirulina major;
genomedb_acc GCF_001890765.1;
genomedb_target db:genomedb|GCF_001890765.1|WP_072622540.1 16 311 evalue:8.9e-54 qcov:94.60 identity:38.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00685; PF13469;
pfam_desc Sulfotransferase domain; Sulfotransferase family;
pfam_id Sulfotransfer_1; Sulfotransfer_3;
pfam_target db:Pfam-A.hmm|PF00685.27 evalue:6.7e-09 score:34.8 best_domain_score:31.4 name:Sulfotransfer_1; db:Pfam-A.hmm|PF13469.6 evalue:1.4e-14 score:54.2 best_domain_score:48.3 name:Sulfotransfer_3;
29521 30513 CDS
ID metaerg.pl|12721
allko_ids K02040;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003182195;
genomedb_acc GCF_003182195.1;
genomedb_target db:genomedb|GCF_003182195.1|WP_110070863.1 5 330 evalue:1.9e-107 qcov:98.80 identity:64.60;
kegg_pathway_id 02010; 02020;
kegg_pathway_name ABC transporters - General; Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00691;
pfam_desc OmpA family;
pfam_id OmpA;
pfam_target db:Pfam-A.hmm|PF00691.20 evalue:1.6e-18 score:66.1 best_domain_score:65.2 name:OmpA;
sp YES;
29521 29601 signal_peptide
ID metaerg.pl|12722
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
30870 31355 CDS
ID metaerg.pl|12723
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-309;s__SZUA-309 sp003247835;
genomedb_acc GCA_003247835.1;
genomedb_target db:genomedb|GCA_003247835.1|QJYB01000068.1_46 1 161 evalue:1.5e-60 qcov:100.00 identity:70.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF01243;
pfam_desc Pyridoxamine 5'-phosphate oxidase;
pfam_id Putative_PNPOx;
pfam_target db:Pfam-A.hmm|PF01243.20 evalue:2.5e-13 score:49.3 best_domain_score:48.6 name:Putative_PNPOx;
32695 31406 CDS
ID metaerg.pl|12724
allec_ids 2.7.8.-;
allgo_ids GO:0003824; GO:0016021; GO:0005886; GO:0008808; GO:0032049;
allko_ids K06131;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nitrococcales;f__Aquisalimonadaceae;g__Aquisalimonas;s__Aquisalimonas asiatica;
genomedb_acc GCF_900110585.1;
genomedb_target db:genomedb|GCF_900110585.1|WP_091645469.1 5 428 evalue:1.7e-151 qcov:98.80 identity:59.40;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metacyc_pathway_id PHOSLIPSYN-PWY; TEICHOICACID-PWY; PWY4FS-4; PHOSLIPSYN2-PWY; PWY-5668; PWY-6385;
metacyc_pathway_name superpathway of phospholipid biosynthesis I (bacteria);; poly(glycerol phosphate) wall teichoic acid biosynthesis;; phosphatidylcholine biosynthesis IV;; superpathway of phospholipid biosynthesis II (plants);; cardiolipin biosynthesis I;; peptidoglycan biosynthesis III (mycobacteria);;
metacyc_pathway_type Phospholipid-Biosynthesis; Super-Pathways;; Teichoic-Acids-Biosynthesis;; PhosphatidylcholineBiosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; Cardiolipin-Biosynthesis;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF00614; PF13091;
pfam_desc Phospholipase D Active site motif; PLD-like domain;
pfam_id PLDc; PLDc_2;
pfam_target db:Pfam-A.hmm|PF00614.22 evalue:3.1e-15 score:54.9 best_domain_score:27.1 name:PLDc; db:Pfam-A.hmm|PF13091.6 evalue:2.2e-45 score:153.0 best_domain_score:104.1 name:PLDc_2;
sp YES;
sprot_desc Cardiolipin synthase;
sprot_id sp|O66043|CLS_BACPE;
sprot_target db:uniprot_sprot|sp|O66043|CLS_BACPE 52 418 evalue:3.8e-54 qcov:85.50 identity:35.80;
tm_num 1;
31406 31498 signal_peptide
ID metaerg.pl|12725
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
32695 31406 transmembrane_helix
ID metaerg.pl|12726
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology i31430-31498o;
34947 33232 CDS
ID metaerg.pl|12727
allgo_ids GO:0009190; GO:0016849; GO:0035556;
allko_ids K07644; K00034; K01769; K08044; K10681; K12321; K13937; K08048; K02486; K12323; K11629; K05345; K07640; K01768; K02668; K08047; K07674; K01057; K07678; K07655; K12320; K02482; K07653; K07636; K08043; K02484; K08041; K07642; K08049; K08042; K00036; K07704; K08046; K08282; K07641; K07673; K11265; K07639; K07652; K07654; K00936; K02478; K08045; K07651; K07718; K07768; K11633; K08884; K12324; K12318; K12319;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Rhizorhabdus;s__Rhizorhabdus wittichii_A;
genomedb_acc GCF_000744515.1;
genomedb_target db:genomedb|GCF_000744515.1|WP_051934806.1 1 571 evalue:4.5e-120 qcov:100.00 identity:43.90;
kegg_pathway_id 00230; 04020; 02020; 00030; 00480; 03090;
kegg_pathway_name Purine metabolism; Calcium signaling pathway; Two-component system - General; Pentose phosphate pathway; Glutathione metabolism; Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00211; PF00672;
pfam_desc Adenylate and Guanylate cyclase catalytic domain; HAMP domain;
pfam_id Guanylate_cyc; HAMP;
pfam_target db:Pfam-A.hmm|PF00211.20 evalue:6.4e-32 score:109.9 best_domain_score:109.1 name:Guanylate_cyc; db:Pfam-A.hmm|PF00672.25 evalue:8.9e-16 score:57.3 best_domain_score:57.3 name:HAMP;
sp YES;
tm_num 2;
33232 33306 signal_peptide
ID metaerg.pl|12728
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
34947 33232 transmembrane_helix
ID metaerg.pl|12729
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology o33256-33324i33832-33900o;
35432 35770 CDS
ID metaerg.pl|12730
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA2965;s__UBA2965 sp002348385;
genomedb_acc GCA_002348385.1;
genomedb_target db:genomedb|GCA_002348385.1|DEBD01000001.1_114 2 112 evalue:5.9e-32 qcov:99.10 identity:56.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF07978;
pfam_desc NIPSNAP;
pfam_id NIPSNAP;
pfam_target db:Pfam-A.hmm|PF07978.13 evalue:9e-07 score:28.3 best_domain_score:28.0 name:NIPSNAP;
36793 35792 CDS
ID metaerg.pl|12731
allec_ids 4.2.1.24;
allgo_ids GO:0004655; GO:0033014; GO:0046872; GO:0005829; GO:0008270; GO:0006783; GO:0006779; GO:0006782;
allko_ids K01698;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax;s__Alcanivorax sp900107995;
genomedb_acc GCF_900107995.1;
genomedb_target db:genomedb|GCF_900107995.1|WP_062817134.1 7 331 evalue:2.0e-136 qcov:97.60 identity:74.50;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metacyc_pathway_id PWY-5529; PWY-5189; PWY-5188; PWY-5918; PWY-5920;
metacyc_pathway_name superpathway of bacteriochlorophyll a biosynthesis;; tetrapyrrole biosynthesis II (from glycine);; tetrapyrrole biosynthesis I (from glutamate);; superpathay of heme b biosynthesis from glutamate;; superpathway of b heme biosynthesis from glycine;;
metacyc_pathway_type Chlorophyll-a-Biosynthesis; Super-Pathways;; Tetrapyrrole-Biosynthesis;; Tetrapyrrole-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;;
pfam_acc PF00490;
pfam_desc Delta-aminolevulinic acid dehydratase;
pfam_id ALAD;
pfam_target db:Pfam-A.hmm|PF00490.21 evalue:6.4e-133 score:442.0 best_domain_score:441.8 name:ALAD;
sprot_desc Delta-aminolevulinic acid dehydratase;
sprot_id sp|Q59643|HEM2_PSEAE;
sprot_target db:uniprot_sprot|sp|Q59643|HEM2_PSEAE 4 333 evalue:2.6e-130 qcov:99.10 identity:70.30;
36946 37380 CDS
ID metaerg.pl|12732
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Stappiaceae;g__Labrenzia;s__Labrenzia aggregata_A;
genomedb_acc GCF_001999245.1;
genomedb_target db:genomedb|GCF_001999245.1|WP_077292069.1 7 144 evalue:4.9e-23 qcov:95.80 identity:45.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
39011 37488 CDS
ID metaerg.pl|12733
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479195.1 13 505 evalue:7.2e-178 qcov:97.20 identity:70.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF01738; PF12146;
pfam_desc Dienelactone hydrolase family; Serine aminopeptidase, S33;
pfam_id DLH; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF01738.18 evalue:5.3e-05 score:22.1 best_domain_score:21.4 name:DLH; db:Pfam-A.hmm|PF12146.8 evalue:2e-14 score:52.7 best_domain_score:52.0 name:Hydrolase_4;
tm_num 9;
39011 37488 transmembrane_helix
ID metaerg.pl|12734
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology o37530-37583i38295-38348o38391-38459i38472-38540o38583-38642i38679-38747o38775-38828i38841-38909o38937-39005i;
39471 39091 CDS
ID metaerg.pl|12735
allko_ids K01759;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Spongiibacteraceae;g__Spongiibacter;s__Spongiibacter marinus;
genomedb_acc GCF_000422345.1;
genomedb_target db:genomedb|GCF_000422345.1|WP_027874623.1 1 125 evalue:8.0e-54 qcov:99.20 identity:78.40;
kegg_pathway_id 04011; 00620;
kegg_pathway_name MAPK signaling pathway - yeast; Pyruvate metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00903;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:1.4e-06 score:27.8 best_domain_score:25.3 name:Glyoxalase;
39938 41047 CDS
ID metaerg.pl|12736
allgo_ids GO:1990281; GO:0005886; GO:0015562; GO:0042910; GO:0006855;
allko_ids K07799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__UBA2357;s__UBA2357 sp002872475;
genomedb_acc GCF_002872475.1;
genomedb_target db:genomedb|GCF_002872475.1|WP_102248248.1 14 364 evalue:1.2e-86 qcov:95.10 identity:54.80;
kegg_pathway_id 02020;
kegg_pathway_name Two-component system - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF13533; PF13437; PF16576;
pfam_desc Biotin-lipoyl like; HlyD family secretion protein; Barrel-sandwich domain of CusB or HlyD membrane-fusion;
pfam_id Biotin_lipoyl_2; HlyD_3; HlyD_D23;
pfam_target db:Pfam-A.hmm|PF13533.6 evalue:3e-06 score:26.2 best_domain_score:23.4 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF13437.6 evalue:2.7e-19 score:69.1 best_domain_score:57.7 name:HlyD_3; db:Pfam-A.hmm|PF16576.5 evalue:7.4e-30 score:103.0 best_domain_score:102.4 name:HlyD_D23;
sp YES;
sprot_desc Multidrug resistance protein MdtA;
sprot_id sp|Q8ZNQ3|MDTA_SALTY;
sprot_target db:uniprot_sprot|sp|Q8ZNQ3|MDTA_SALTY 38 348 evalue:8.5e-18 qcov:84.30 identity:26.30;
tigrfam_acc TIGR01730;
tigrfam_desc efflux transporter, RND family, MFP subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name RND_mfp;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR01730 evalue:6.8e-70 score:234.7 best_domain_score:234.5 name:TIGR01730;
39938 40039 signal_peptide
ID metaerg.pl|12737
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
41044 44181 CDS
ID metaerg.pl|12738
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886;
allko_ids K18138;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D;s__Pseudomonas_D sp002056295;
genomedb_acc GCF_002056295.1;
genomedb_target db:genomedb|GCF_002056295.1|WP_080051016.1 1 1031 evalue:0.0e+00 qcov:98.70 identity:69.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00873; PF03176; PF02355;
pfam_desc AcrB/AcrD/AcrF family; MMPL family; Protein export membrane protein;
pfam_id ACR_tran; MMPL; SecD_SecF;
pfam_target db:Pfam-A.hmm|PF00873.19 evalue:1.8e-285 score:948.8 best_domain_score:948.6 name:ACR_tran; db:Pfam-A.hmm|PF03176.15 evalue:1.2e-06 score:26.9 best_domain_score:21.1 name:MMPL; db:Pfam-A.hmm|PF02355.16 evalue:7.3e-05 score:21.5 best_domain_score:21.5 name:SecD_SecF;
sprot_desc Uncharacterized transporter HI_0895;
sprot_id sp|Q57124|Y895_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57124|Y895_HAEIN 1 1015 evalue:1.6e-149 qcov:97.10 identity:34.60;
tm_num 12;
41044 44181 transmembrane_helix
ID metaerg.pl|12739
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology i41062-41130o42043-42111i42115-42183o42196-42264i42337-42405o42433-42501i42610-42678o43603-43671i43690-43758o43786-43845i43903-43971o43999-44067i;
44732 44229 CDS
ID metaerg.pl|12740
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF04892;
pfam_desc VanZ like family;
pfam_id VanZ;
pfam_target db:Pfam-A.hmm|PF04892.12 evalue:1.5e-08 score:34.6 best_domain_score:33.9 name:VanZ;
tm_num 5;
44732 44229 transmembrane_helix
ID metaerg.pl|12741
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology o44238-44291i44328-44387o44445-44504i44523-44576o44604-44672i;
44983 45648 CDS
ID metaerg.pl|12742
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000072.1_2 12 202 evalue:2.1e-41 qcov:86.40 identity:49.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00440;
pfam_desc Bacterial regulatory proteins, tetR family;
pfam_id TetR_N;
pfam_target db:Pfam-A.hmm|PF00440.23 evalue:5.2e-17 score:60.6 best_domain_score:59.3 name:TetR_N;
45645 46520 CDS
ID metaerg.pl|12743
allec_ids 1.-.-.-;
allgo_ids GO:0016491; GO:0046274;
allko_ids K05711; K00022; K12420; K03366;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA9659;s__UBA9659 sp002694945;
genomedb_acc GCA_002694945.1;
genomedb_target db:genomedb|GCA_002694945.1|MAM80804.1 1 281 evalue:1.1e-90 qcov:96.60 identity:61.20;
kegg_pathway_id 00930; 00380; 00310; 00280; 00281; 00650; 00071; 00360; 00062;
kegg_pathway_name Caprolactam degradation; Tryptophan metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Butanoate metabolism; Fatty acid metabolism; Phenylalanine metabolism; Fatty acid elongation in mitochondria;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metacyc_pathway_id PWY-5479; PWY-5987; PWY-5469; PWYG-321; PWY-6113; PWY-5271; PWY-4302; PWY-2821; PWY-5826;
metacyc_pathway_name 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; sesamin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;;
metacyc_pathway_type LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:3.6e-53 score:179.1 best_domain_score:178.9 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:1.6e-38 score:131.8 best_domain_score:131.5 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:5.6e-15 score:54.9 best_domain_score:54.4 name:KR;
sp YES;
sprot_desc C alpha-dehydrogenase;
sprot_id sp|Q01198|LIGD_SPHSK;
sprot_target db:uniprot_sprot|sp|Q01198|LIGD_SPHSK 1 282 evalue:1.3e-40 qcov:96.90 identity:35.30;
tm_num 1;
45645 45725 signal_peptide
ID metaerg.pl|12744
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
45645 46520 transmembrane_helix
ID metaerg.pl|12745
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology i45663-45731o;
46562 47839 CDS
ID metaerg.pl|12746
allgo_ids GO:0016705; GO:0055114;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__SZUA-521;s__SZUA-521 sp003248125;
genomedb_acc GCA_003248125.1;
genomedb_target db:genomedb|GCA_003248125.1|QJXZ01000084.1_2 1 425 evalue:8.3e-212 qcov:100.00 identity:83.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:2.2e-42 score:144.8 best_domain_score:143.9 name:Bac_luciferase;
48513 47920 CDS
ID metaerg.pl|12747
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter barkolensis;
genomedb_acc GCF_002834295.1;
genomedb_target db:genomedb|GCF_002834295.1|WP_101074122.1 8 197 evalue:1.7e-50 qcov:96.40 identity:51.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
sp YES;
tm_num 1;
47920 47994 signal_peptide
ID metaerg.pl|12748
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
48513 47920 transmembrane_helix
ID metaerg.pl|12749
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology i47938-47997o;
50400 48712 CDS
ID metaerg.pl|12750
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Pedosphaerales;f__Pedosphaeraceae;g__PALSA-1440;s__PALSA-1440 sp003152225;
genomedb_acc GCA_003152225.1;
genomedb_target db:genomedb|GCA_003152225.1|PLZQ01000074.1_9 8 562 evalue:1.5e-75 qcov:98.80 identity:33.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00144; PF11954;
pfam_desc Beta-lactamase; Domain of unknown function (DUF3471);
pfam_id Beta-lactamase; DUF3471;
pfam_target db:Pfam-A.hmm|PF00144.24 evalue:5.7e-60 score:202.5 best_domain_score:201.8 name:Beta-lactamase; db:Pfam-A.hmm|PF11954.8 evalue:9e-10 score:38.2 best_domain_score:25.0 name:DUF3471;
sp YES;
48712 48789 signal_peptide
ID metaerg.pl|12751
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
50659 52185 CDS
ID metaerg.pl|12752
allec_ids 6.2.1.-;
allgo_ids GO:0003824; GO:0005524; GO:0016874;
allko_ids K01586; K05939; K00992; K02364; K01912; K01779; K01776; K00143; K03367; K01652; K01897; K01895; K01784; K01909; K01904; K00666;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__Phenylobacterium;s__Phenylobacterium zucineum_A;
genomedb_acc GCF_000017265.1;
genomedb_target db:genomedb|GCF_000017265.1|WP_083770813.1 1 508 evalue:1.7e-195 qcov:100.00 identity:65.70;
kegg_pathway_id 00010; 00310; 00564; 00290; 01053; 00770; 00473; 00252; 00251; 00052; 00660; 00471; 00061; 00071; 00360; 00520; 00720; 00940; 00620; 00650; 00640; 00300;
kegg_pathway_name Glycolysis / Gluconeogenesis; Lysine degradation; Glycerophospholipid metabolism; Valine, leucine and isoleucine biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; D-Alanine metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Galactose metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid biosynthesis; Fatty acid metabolism; Phenylalanine metabolism; Nucleotide sugars metabolism; Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis; Pyruvate metabolism; Butanoate metabolism; Propanoate metabolism; Lysine biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metacyc_pathway_id CARNMET-PWY; PWY-6457; PWY-5958; PWY-6318; P601-PWY; PWY-6443; PWY-6432;
metacyc_pathway_name L-carnitine degradation I;; cinnamoyl-CoA biosynthesis;; acridone alkaloid biosynthesis;; L-phenylalanine degradation IV (mammalian, via side chain);; (+)-camphor degradation;; benzoate biosynthesis I (CoA-dependent, β-oxidative);; curcuminoid biosynthesis;;
metacyc_pathway_type CARN-DEG;; AROMATIC-COMPOUNDS-BIOSYN; CINNAMATE-SYN;; ALKALOIDS-SYN;; PHENYLALANINE-DEG;; Camphor-Degradation;; Benzoate-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN; Super-Pathways;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:1.2e-66 score:224.3 best_domain_score:224.0 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:1.5e-17 score:63.5 best_domain_score:61.9 name:AMP-binding_C;
sprot_desc Putative acyl-CoA synthetase YngI;
sprot_id sp|O31826|YNGI_BACSU;
sprot_target db:uniprot_sprot|sp|O31826|YNGI_BACSU 22 498 evalue:3.3e-52 qcov:93.90 identity:31.20;
52233 52574 CDS
ID metaerg.pl|12753
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Thioalkalivibrio_A;s__Thioalkalivibrio_A thiocyanodenitrificans;
genomedb_acc GCF_000378965.1;
genomedb_target db:genomedb|GCF_000378965.1|WP_018231802.1 1 94 evalue:1.1e-17 qcov:83.20 identity:54.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
55999 52811 CDS
ID metaerg.pl|12754
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__UBA3067;g__GCA-002402085;s__GCA-002402085 sp002402085;
genomedb_acc GCA_002402085.1;
genomedb_target db:genomedb|GCA_002402085.1|PCJ16373.1 33 1059 evalue:3.9e-109 qcov:96.70 identity:29.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF07715; PF00593;
pfam_desc TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:7.4e-22 score:77.2 best_domain_score:75.6 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:9.8e-38 score:130.4 best_domain_score:130.4 name:TonB_dep_Rec;
sp YES;
52811 52924 signal_peptide
ID metaerg.pl|12755
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
56547 56278 CDS
ID metaerg.pl|12756
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Chromatiaceae;g__Thioflavicoccus;s__Thioflavicoccus mobilis;
genomedb_acc GCF_000327045.1;
genomedb_target db:genomedb|GCF_000327045.1|WP_015280270.1 2 79 evalue:2.0e-19 qcov:87.60 identity:61.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF09335;
pfam_desc SNARE associated Golgi protein;
pfam_id SNARE_assoc;
pfam_target db:Pfam-A.hmm|PF09335.11 evalue:5.1e-09 score:35.9 best_domain_score:35.7 name:SNARE_assoc;
sprot_desc hypothetical protein;
sprot_id sp|P36684|Y703_HISSO;
sprot_target db:uniprot_sprot|sp|P36684|Y703_HISSO 10 85 evalue:6.8e-14 qcov:85.40 identity:44.70;
tm_num 2;
56547 56278 transmembrane_helix
ID metaerg.pl|12757
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology i56338-56391o56401-56469i;
57858 56932 CDS
ID metaerg.pl|12758
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Steroidobacterales;f__Steroidobacteraceae;g__ZC4RG39;s__ZC4RG39 sp003242495;
genomedb_acc GCA_003242495.1;
genomedb_target db:genomedb|GCA_003242495.1|PZN30392.1 1 306 evalue:5.6e-133 qcov:99.40 identity:74.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
sp YES;
56932 57012 signal_peptide
ID metaerg.pl|12759
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
60962 57858 CDS
ID metaerg.pl|12760
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudohongiellaceae;g__Pseudohongiella;s__Pseudohongiella sp002706685;
genomedb_acc GCA_002706685.1;
genomedb_target db:genomedb|GCA_002706685.1|MAY54440.1 6 1034 evalue:0.0e+00 qcov:99.50 identity:71.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF07715; PF00593;
pfam_desc TonB-dependent Receptor Plug Domain; TonB dependent receptor;
pfam_id Plug; TonB_dep_Rec;
pfam_target db:Pfam-A.hmm|PF07715.15 evalue:8.4e-21 score:73.8 best_domain_score:72.5 name:Plug; db:Pfam-A.hmm|PF00593.24 evalue:1.7e-37 score:129.6 best_domain_score:128.6 name:TonB_dep_Rec;
sp YES;
57858 57950 signal_peptide
ID metaerg.pl|12761
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
61960 61205 CDS
ID metaerg.pl|12762
allec_ids 1.13.11.83;
allgo_ids GO:0046872; GO:0016491; GO:0017000;
allko_ids K12708;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA4421;s__UBA4421 sp002389675;
genomedb_acc GCA_002389675.1;
genomedb_target db:genomedb|GCA_002389675.1|DGQF01000016.1_8 9 251 evalue:2.4e-97 qcov:96.80 identity:72.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00596;
pfam_desc Class II Aldolase and Adducin N-terminal domain;
pfam_id Aldolase_II;
pfam_target db:Pfam-A.hmm|PF00596.21 evalue:2.1e-34 score:118.3 best_domain_score:118.0 name:Aldolase_II;
sprot_desc 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase;
sprot_id sp|Q8GHB1|CLOR_STRRC;
sprot_target db:uniprot_sprot|sp|Q8GHB1|CLOR_STRRC 21 230 evalue:2.1e-28 qcov:83.70 identity:37.70;
62192 62944 CDS
ID metaerg.pl|12763
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000068.1_122 1 248 evalue:4.1e-86 qcov:99.20 identity:62.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF04237;
pfam_desc YjbR;
pfam_id YjbR;
pfam_target db:Pfam-A.hmm|PF04237.13 evalue:9.8e-25 score:86.2 best_domain_score:45.1 name:YjbR;
63006 63839 CDS
ID metaerg.pl|12764
allec_ids 3.5.-.-;
allgo_ids GO:0006807; GO:0009507; GO:0005737; GO:0009536; GO:0110050; GO:0110051; GO:0046686;
allko_ids K03820; K11206;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA8366;f__GCA-2696645;g__GCA-2696645;s__GCA-2696645 sp002709955;
genomedb_acc GCA_002709955.1;
genomedb_target db:genomedb|GCA_002709955.1|MBB58653.1 2 274 evalue:4.9e-104 qcov:98.60 identity:65.90;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00795;
pfam_desc Carbon-nitrogen hydrolase;
pfam_id CN_hydrolase;
pfam_target db:Pfam-A.hmm|PF00795.22 evalue:3.5e-55 score:186.4 best_domain_score:186.2 name:CN_hydrolase;
sprot_desc Nitrilase-like protein 2;
sprot_id sp|Q94JV5|NILP2_ARATH;
sprot_target db:uniprot_sprot|sp|Q94JV5|NILP2_ARATH 6 263 evalue:4.0e-52 qcov:93.10 identity:41.80;
64108 65373 CDS
ID metaerg.pl|12765
allec_ids 3.5.2.7;
allgo_ids GO:0016787; GO:0005737; GO:0050480; GO:0005506; GO:0008270; GO:0019556; GO:0019557;
allko_ids K01468;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Alcanivoracaceae;g__Alcanivorax_A;s__Alcanivorax_A sp003259185;
genomedb_acc GCF_003259185.1;
genomedb_target db:genomedb|GCF_003259185.1|WP_111655515.1 14 418 evalue:2.6e-96 qcov:96.20 identity:44.90;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metacyc_pathway_id HISHP-PWY; HISDEG-PWY; PWY-5030; PWY-5028;
metacyc_pathway_name L-histidine degradation VI;; L-histidine degradation I;; L-histidine degradation III;; L-histidine degradation II;;
metacyc_pathway_type HISTIDINE-DEG;; HISTIDINE-DEG;; HISTIDINE-DEG;; HISTIDINE-DEG;;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:2.2e-22 score:79.1 best_domain_score:77.6 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:3.9e-19 score:68.7 best_domain_score:44.9 name:Amidohydro_3;
sp YES;
sprot_desc Imidazolonepropionase;
sprot_id sp|Q5Z0G2|HUTI_NOCFA;
sprot_target db:uniprot_sprot|sp|Q5Z0G2|HUTI_NOCFA 59 398 evalue:5.7e-10 qcov:80.80 identity:26.00;
64108 64173 lipoprotein_signal_peptide
ID metaerg.pl|12766
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
68368 65987 CDS
ID metaerg.pl|12767
allgo_ids GO:0009055; GO:0020037;
allko_ids K05601; K15864; K02275; K00368; K00428; K02305; K08685; K00405; K05301; K00120; K16255;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__HTCC2089;g__UBA7803;s__UBA7803 sp002480525;
genomedb_acc GCA_002480525.1;
genomedb_target db:genomedb|GCA_002480525.1|DLCH01000033.1_13 23 789 evalue:2.8e-189 qcov:96.70 identity:47.80;
kegg_pathway_id 00626; 00920; 00624; 00632; 00361; 00903; 00910; 00190; 00680;
kegg_pathway_name Naphthalene and anthracene degradation; Sulfur metabolism; 1- and 2-Methylnaphthalene degradation; Benzoate degradation via CoA ligation; gamma-Hexachlorocyclohexane degradation; Limonene and pinene degradation; Nitrogen metabolism; Oxidative phosphorylation; Methane metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metabolic_acc TIGR00782;
metabolic_process compound:Oxygen;process:Cytochrome c oxidase, cbb3-type;gene:ccoP;;
pfam_acc PF13442; PF00034; PF02239;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c; Cytochrome D1 heme domain;
pfam_id Cytochrome_CBB3; Cytochrom_C; Cytochrom_D1;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:5e-28 score:96.5 best_domain_score:38.3 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:7.1e-19 score:68.0 best_domain_score:28.9 name:Cytochrom_C; db:Pfam-A.hmm|PF02239.16 evalue:6.8e-59 score:198.5 best_domain_score:197.9 name:Cytochrom_D1;
sp YES;
65987 66055 signal_peptide
ID metaerg.pl|12768
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
71154 68776 CDS
ID metaerg.pl|12769
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Beijerinckia;s__Beijerinckia indica;
genomedb_acc GCF_000019845.1;
genomedb_target db:genomedb|GCF_000019845.1|WP_012384619.1 34 791 evalue:2.1e-293 qcov:95.70 identity:62.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF06742; PF06863;
pfam_desc Protein of unknown function (DUF1214); Protein of unknown function (DUF1254);
pfam_id DUF1214; DUF1254;
pfam_target db:Pfam-A.hmm|PF06742.11 evalue:1.9e-55 score:185.2 best_domain_score:128.9 name:DUF1214; db:Pfam-A.hmm|PF06863.12 evalue:3.4e-59 score:197.9 best_domain_score:145.7 name:DUF1254;
sp YES;
68776 68850 signal_peptide
ID metaerg.pl|12770
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
72205 71315 CDS
ID metaerg.pl|12771
allko_ids K00548;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Maliponia;s__Maliponia aquimaris;
genomedb_acc GCF_900184945.1;
genomedb_target db:genomedb|GCF_900184945.1|WP_094020386.1 1 295 evalue:7.5e-111 qcov:99.70 identity:69.30;
kegg_pathway_id 00670; 00271;
kegg_pathway_name One carbon pool by folate; Methionine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF02574;
pfam_desc Homocysteine S-methyltransferase;
pfam_id S-methyl_trans;
pfam_target db:Pfam-A.hmm|PF02574.16 evalue:4.5e-57 score:193.1 best_domain_score:192.9 name:S-methyl_trans;
72816 72337 CDS
ID metaerg.pl|12772
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Halomonas_D;s__Halomonas_D sp002286965;
genomedb_acc GCF_002286965.1;
genomedb_target db:genomedb|GCF_002286965.1|WP_095615693.1 18 159 evalue:5.4e-07 qcov:89.30 identity:34.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF13511;
pfam_desc Domain of unknown function (DUF4124);
pfam_id DUF4124;
pfam_target db:Pfam-A.hmm|PF13511.6 evalue:4.9e-10 score:38.8 best_domain_score:32.8 name:DUF4124;
sp YES;
72337 72441 signal_peptide
ID metaerg.pl|12773
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
73370 72813 CDS
ID metaerg.pl|12774
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA8366;f__GCA-2696645;g__GCA-2696645;s__GCA-2696645 sp002709955;
genomedb_acc GCA_002709955.1;
genomedb_target db:genomedb|GCA_002709955.1|MBB58625.1 1 177 evalue:9.9e-61 qcov:95.70 identity:62.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
73780 73370 CDS
ID metaerg.pl|12775
genomedb_OC d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__SG8-38;s__SG8-38 sp001303415;
genomedb_acc GCA_001303415.1;
genomedb_target db:genomedb|GCA_001303415.1|KPK17139.1 1 136 evalue:3.5e-23 qcov:100.00 identity:50.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF01124;
pfam_desc MAPEG family;
pfam_id MAPEG;
pfam_target db:Pfam-A.hmm|PF01124.18 evalue:8.9e-16 score:57.2 best_domain_score:57.1 name:MAPEG;
sp YES;
tm_num 3;
73370 73441 signal_peptide
ID metaerg.pl|12776
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
73780 73370 transmembrane_helix
ID metaerg.pl|12777
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
topology o73382-73450i73562-73621o73703-73771i;
73969 75045 CDS
ID metaerg.pl|12778
allgo_ids GO:0016705; GO:0055114;
allko_ids K00320;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Dehalococcoidia;o__SM23-28-2;f__RBG-16-68-14;g__SZUA-185;s__SZUA-185 sp003228685;
genomedb_acc GCA_003228685.1;
genomedb_target db:genomedb|GCA_003228685.1|QIFC01000022.1_7 1 358 evalue:6.0e-163 qcov:100.00 identity:76.50;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
pfam_acc PF00296;
pfam_desc Luciferase-like monooxygenase;
pfam_id Bac_luciferase;
pfam_target db:Pfam-A.hmm|PF00296.20 evalue:1.7e-32 score:112.3 best_domain_score:109.9 name:Bac_luciferase;
tigrfam_acc TIGR03857;
tigrfam_desc probable F420-dependent oxidoreductase, MSMEG_2249 family;
tigrfam_mainrole Unknown function;
tigrfam_name F420_MSMEG_2249;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR03857 evalue:2.1e-118 score:394.5 best_domain_score:394.3 name:TIGR03857;
75084 76079 CDS
ID metaerg.pl|12779
allec_ids 1.3.1.84;
allgo_ids GO:0055114; GO:0005737; GO:0043957;
allko_ids K00001; K19745;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ga0077536;f__Ga0077536;g__UBA981;s__UBA981 sp002292285;
genomedb_acc GCA_002292285.1;
genomedb_target db:genomedb|GCA_002292285.1|DBBP01000008.1_44 1 331 evalue:3.5e-133 qcov:100.00 identity:72.50;
kegg_pathway_id 00350; 00120; 00071; 00641; 00624; 00010;
kegg_pathway_name Tyrosine metabolism; Bile acid biosynthesis; Fatty acid metabolism; 3-Chloroacrylic acid degradation; 1- and 2-Methylnaphthalene degradation; Glycolysis / Gluconeogenesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0957722; 13.003; 0.214148; 0.0250726; 13.3379;
metacyc_pathway_id PWY-5743; PWY-5789;
metacyc_pathway_name 3-hydroxypropanoate cycle;; 3-hydroxypropanoate/4-hydroxybutanate cycle;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; Autotrophic-CO2-Fixation;;
pfam_acc PF08240; PF00107;
pfam_desc Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase;
pfam_id ADH_N; ADH_zinc_N;
pfam_target db:Pfam-A.hmm|PF08240.12 evalue:3e-06 score:26.3 best_domain_score:25.1 name:ADH_N; db:Pfam-A.hmm|PF00107.26 evalue:1.4e-13 score:50.2 best_domain_score:49.6 name:ADH_zinc_N;
sprot_desc Acrylyl-CoA reductase AcuI;
sprot_id sp|Q5LS56|ACUI_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LS56|ACUI_RUEPO 5 331 evalue:3.4e-90 qcov:98.80 identity:52.60;
tigrfam_acc TIGR02823;
tigrfam_desc putative quinone oxidoreductase, YhdH/YhfP family;
tigrfam_mainrole Unknown function;
tigrfam_name oxido_YhdH;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR02823 evalue:2.4e-122 score:407.0 best_domain_score:406.8 name:TIGR02823;
>Feature NODE_100_length_76017_cov_14.1113
538 86 CDS
ID metaerg.pl|12780
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Ahrensia;s__Ahrensia kielensis;
genomedb_acc GCF_000374465.1;
genomedb_target db:genomedb|GCF_000374465.1|WP_018687699.1 13 150 evalue:5.3e-28 qcov:92.00 identity:46.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
sp YES;
86 169 signal_peptide
ID metaerg.pl|12781
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
1449 535 CDS
ID metaerg.pl|12782
allec_ids 1.3.3.3;
allgo_ids GO:0004109; GO:0006779; GO:0055114; GO:0005737; GO:0046872; GO:0042803; GO:0006782;
allko_ids K00228;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109532105.1 9 304 evalue:2.2e-142 qcov:97.40 identity:82.10;
kegg_pathway_id 00860;
kegg_pathway_name Porphyrin and chlorophyll metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
metacyc_pathway_id PWY-5531; PWY-5529; CHLOROPHYLL-SYN; PWY-5918; PWY-5920; PWY0-1415; HEME-BIOSYNTHESIS-II;
metacyc_pathway_name 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic);; superpathway of bacteriochlorophyll a biosynthesis;; 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent);; superpathay of heme b biosynthesis from glutamate;; superpathway of b heme biosynthesis from glycine;; superpathway of heme b biosynthesis from uroporphyrinogen-III;; heme b biosynthesis I (aerobic);;
metacyc_pathway_type Chlorophyllide-a-Biosynthesis;; Chlorophyll-a-Biosynthesis; Super-Pathways;; Chlorophyllide-a-Biosynthesis;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis; Super-Pathways;; Heme-b-Biosynthesis;;
pfam_acc PF01218;
pfam_desc Coproporphyrinogen III oxidase;
pfam_id Coprogen_oxidas;
pfam_target db:Pfam-A.hmm|PF01218.18 evalue:3.7e-93 score:310.7 best_domain_score:310.5 name:Coprogen_oxidas;
sprot_desc Oxygen-dependent coproporphyrinogen-III oxidase;
sprot_id sp|Q11GB4|HEM6_CHESB;
sprot_target db:uniprot_sprot|sp|Q11GB4|HEM6_CHESB 10 303 evalue:1.1e-79 qcov:96.70 identity:52.00;
2315 1569 CDS
ID metaerg.pl|12783
allec_ids 3.1.1.29;
allgo_ids GO:0004045; GO:0005737; GO:0006412;
allko_ids K01056;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08433.1 1 248 evalue:1.2e-88 qcov:100.00 identity:70.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF01195;
pfam_desc Peptidyl-tRNA hydrolase;
pfam_id Pept_tRNA_hydro;
pfam_target db:Pfam-A.hmm|PF01195.19 evalue:7e-50 score:168.5 best_domain_score:168.3 name:Pept_tRNA_hydro;
sprot_desc Peptidyl-tRNA hydrolase;
sprot_id sp|Q1GK69|PTH_RUEST;
sprot_target db:uniprot_sprot|sp|Q1GK69|PTH_RUEST 1 189 evalue:1.7e-78 qcov:76.20 identity:70.40;
tigrfam_acc TIGR00447;
tigrfam_desc aminoacyl-tRNA hydrolase;
tigrfam_mainrole Protein synthesis;
tigrfam_name pth;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00447 evalue:8.3e-50 score:168.2 best_domain_score:168.0 name:TIGR00447;
3176 2547 CDS
ID metaerg.pl|12784
allgo_ids GO:0003735; GO:0005840; GO:0006412; GO:0008097;
allko_ids K02897;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08435.1 1 206 evalue:1.7e-88 qcov:98.60 identity:80.70;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF01386; PF14693;
pfam_desc Ribosomal L25p family; Ribosomal protein TL5, C-terminal domain;
pfam_id Ribosomal_L25p; Ribosomal_TL5_C;
pfam_target db:Pfam-A.hmm|PF01386.19 evalue:8.9e-22 score:76.6 best_domain_score:75.8 name:Ribosomal_L25p; db:Pfam-A.hmm|PF14693.6 evalue:1e-24 score:85.9 best_domain_score:85.0 name:Ribosomal_TL5_C;
sprot_desc 50S ribosomal protein L25;
sprot_id sp|A4WPE3|RL25_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WPE3|RL25_RHOS5 1 193 evalue:2.6e-80 qcov:92.30 identity:76.70;
tigrfam_acc TIGR00731;
tigrfam_desc ribosomal protein bL25, Ctc-form;
tigrfam_mainrole Protein synthesis;
tigrfam_name bL25_bact_ctc;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00731 evalue:7e-38 score:129.2 best_domain_score:129.1 name:TIGR00731;
3412 4524 CDS
ID metaerg.pl|12785
allgo_ids GO:0016021; GO:0055085;
allko_ids K08219;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08437.1 1 369 evalue:1.3e-104 qcov:99.70 identity:62.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:7.6e-09 score:34.2 best_domain_score:34.2 name:MFS_1;
tm_num 10;
3412 4524 transmembrane_helix
ID metaerg.pl|12786
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i3472-3540o3640-3708i3766-3834o3847-3906i3964-4032o4075-4143i4180-4248o4258-4326i4360-4428o4441-4509i;
4608 5771 CDS
ID metaerg.pl|12787
allec_ids 1.3.8.4;
allgo_ids GO:0016627; GO:0055114; GO:0005759; GO:0005739; GO:0005524; GO:0050660; GO:0008470; GO:0006552;
allko_ids K08098; K11731; K11538; K00249; K14448; K09478; K00120; K00252; K00232; K06446; K00253; K00248; K11410;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06546.1 1 386 evalue:3.4e-196 qcov:99.70 identity:88.60;
kegg_pathway_id 00361; 00632; 00380; 00650; 00640; 00592; 01040; 00903; 00930; 00310; 00624; 01031; 00280; 00626; 00071; 00410;
kegg_pathway_name gamma-Hexachlorocyclohexane degradation; Benzoate degradation via CoA ligation; Tryptophan metabolism; Butanoate metabolism; Propanoate metabolism; alpha-Linolenic acid metabolism; Biosynthesis of unsaturated fatty acids; Limonene and pinene degradation; Caprolactam degradation; Lysine degradation; 1- and 2-Methylnaphthalene degradation; Glycan structures - biosynthesis 2; Valine, leucine and isoleucine degradation; Naphthalene and anthracene degradation; Fatty acid metabolism; beta-Alanine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00441; PF08028; PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_1; Acyl-CoA_dh_2; Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF00441.24 evalue:9.1e-43 score:145.3 best_domain_score:144.4 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF08028.11 evalue:9.9e-18 score:63.9 best_domain_score:63.9 name:Acyl-CoA_dh_2; db:Pfam-A.hmm|PF02770.19 evalue:2.6e-25 score:87.7 best_domain_score:86.5 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:2.9e-35 score:120.6 best_domain_score:119.1 name:Acyl-CoA_dh_N;
sprot_desc Isovaleryl-CoA dehydrogenase, mitochondrial;
sprot_id sp|Q75IM9|IVD_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q75IM9|IVD_ORYSJ 15 382 evalue:2.1e-131 qcov:95.10 identity:61.90;
5838 6374 CDS
ID metaerg.pl|12788
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092889342.1 22 166 evalue:3.4e-34 qcov:81.50 identity:54.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF07007;
pfam_desc Lysozyme inhibitor LprI;
pfam_id LprI;
pfam_target db:Pfam-A.hmm|PF07007.12 evalue:7.2e-18 score:64.4 best_domain_score:63.8 name:LprI;
sp YES;
5838 5915 signal_peptide
ID metaerg.pl|12789
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
6444 8033 CDS
ID metaerg.pl|12790
allec_ids 6.2.1.2;
allgo_ids GO:0003824; GO:0005759; GO:0003996; GO:0005524; GO:0047760; GO:0015645; GO:0004321; GO:0046872; GO:0006637; GO:0006633;
allko_ids K00143; K03367; K01776; K01779; K00992; K02364; K05939; K01586; K01909; K01904; K01895; K01897; K01652; K01896;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068297030.1 2 518 evalue:5.6e-226 qcov:97.70 identity:76.60;
kegg_pathway_id 00720; 00940; 00620; 00650; 00640; 00300; 00564; 00310; 00010; 00290; 00770; 01053; 00473; 00252; 00251; 00660; 00471; 00071;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis; Pyruvate metabolism; Butanoate metabolism; Propanoate metabolism; Lysine biosynthesis; Glycerophospholipid metabolism; Lysine degradation; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis; Biosynthesis of siderophore group nonribosomal peptides; D-Alanine metabolism; Alanine and aspartate metabolism; Glutamate metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Fatty acid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:1.3e-69 score:234.1 best_domain_score:233.7 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:3.3e-19 score:68.9 best_domain_score:68.1 name:AMP-binding_C;
sprot_desc Acyl-coenzyme A synthetase ACSM2, mitochondrial;
sprot_id sp|O70490|ACSM2_RAT;
sprot_target db:uniprot_sprot|sp|O70490|ACSM2_RAT 75 517 evalue:2.4e-50 qcov:83.70 identity:31.70;
8030 9634 CDS
ID metaerg.pl|12791
allec_ids 6.4.1.4;
allgo_ids GO:1905202; GO:0005759; GO:0005739; GO:0005524; GO:0004485; GO:0015936; GO:0006552;
allko_ids K15052; K01959; K01571; K15036; K01966; K01969; K01963; K03416;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003122215;
genomedb_acc GCF_003122215.1;
genomedb_target db:genomedb|GCF_003122215.1|WP_109532288.1 1 534 evalue:1.5e-266 qcov:100.00 identity:85.00;
kegg_pathway_id 00280; 00020; 00252; 00620; 00330; 00253; 00640; 00061;
kegg_pathway_name Valine, leucine and isoleucine degradation; Citrate cycle (TCA cycle); Alanine and aspartate metabolism; Pyruvate metabolism; Arginine and proline metabolism; Tetracycline biosynthesis; Propanoate metabolism; Fatty acid biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
metacyc_pathway_id LEU-DEG2-PWY;
metacyc_pathway_name L-leucine degradation I;;
metacyc_pathway_type LEUCINE-DEG;;
pfam_acc PF01039; PF06833;
pfam_desc Carboxyl transferase domain; Malonate decarboxylase gamma subunit (MdcE);
pfam_id Carboxyl_trans; MdcE;
pfam_target db:Pfam-A.hmm|PF01039.22 evalue:2.8e-148 score:493.8 best_domain_score:493.5 name:Carboxyl_trans; db:Pfam-A.hmm|PF06833.11 evalue:0.00013 score:20.8 best_domain_score:11.0 name:MdcE;
sprot_desc Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial;
sprot_id sp|Q3ULD5|MCCB_MOUSE;
sprot_target db:uniprot_sprot|sp|Q3ULD5|MCCB_MOUSE 2 534 evalue:4.8e-195 qcov:99.80 identity:64.20;
10119 9640 CDS
ID metaerg.pl|12792
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rubrimonas;s__Rubrimonas cliftonensis;
genomedb_acc GCF_900107585.1;
genomedb_target db:genomedb|GCF_900107585.1|WP_093247579.1 1 156 evalue:7.3e-52 qcov:98.10 identity:63.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
10290 12221 CDS
ID metaerg.pl|12793
allec_ids 6.4.1.4;
allgo_ids GO:0005524; GO:0022626; GO:0005759; GO:0005739; GO:0050897; GO:0004485; GO:0006552;
allko_ids K01958; K01960; K01968; K08289; K03416; K14541; K00658; K02536; K01964; K01457; K01955; K01941; K01959; K01965; K01571; K00382; K01966;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter aggregans;
genomedb_acc GCA_003075525.1;
genomedb_target db:genomedb|GCA_003075525.1|PVE47083.1 1 643 evalue:2.0e-273 qcov:100.00 identity:77.40;
kegg_pathway_id 00240; 00540; 00640; 00220; 00620; 00330; 00791; 00020; 00260; 00670; 00230; 00280; 00010; 00310; 00252; 00251;
kegg_pathway_name Pyrimidine metabolism; Lipopolysaccharide biosynthesis; Propanoate metabolism; Urea cycle and metabolism of amino groups; Pyruvate metabolism; Arginine and proline metabolism; Atrazine degradation; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; One carbon pool by folate; Purine metabolism; Valine, leucine and isoleucine degradation; Glycolysis / Gluconeogenesis; Lysine degradation; Alanine and aspartate metabolism; Glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
metacyc_pathway_id LEU-DEG2-PWY;
metacyc_pathway_name L-leucine degradation I;;
metacyc_pathway_type LEUCINE-DEG;;
pfam_acc PF02222; PF02785; PF00289; PF00364; PF13533; PF02786; PF07478;
pfam_desc ATP-grasp domain; Biotin carboxylase C-terminal domain; Biotin carboxylase, N-terminal domain; Biotin-requiring enzyme; Biotin-lipoyl like; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus;
pfam_id ATP-grasp; Biotin_carb_C; Biotin_carb_N; Biotin_lipoyl; Biotin_lipoyl_2; CPSase_L_D2; Dala_Dala_lig_C;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:2.9e-08 score:32.7 best_domain_score:30.2 name:ATP-grasp; db:Pfam-A.hmm|PF02785.19 evalue:2.4e-32 score:110.5 best_domain_score:109.5 name:Biotin_carb_C; db:Pfam-A.hmm|PF00289.22 evalue:1.6e-43 score:147.0 best_domain_score:145.6 name:Biotin_carb_N; db:Pfam-A.hmm|PF00364.22 evalue:3.4e-16 score:58.1 best_domain_score:55.8 name:Biotin_lipoyl; db:Pfam-A.hmm|PF13533.6 evalue:1.1e-08 score:34.0 best_domain_score:18.0 name:Biotin_lipoyl_2; db:Pfam-A.hmm|PF02786.17 evalue:5.9e-73 score:244.1 best_domain_score:243.4 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:4.8e-08 score:32.0 best_domain_score:30.5 name:Dala_Dala_lig_C;
sprot_desc Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial;
sprot_id sp|Q42523|MCCA_ARATH;
sprot_target db:uniprot_sprot|sp|Q42523|MCCA_ARATH 3 615 evalue:1.1e-145 qcov:95.30 identity:47.50;
13696 12335 CDS
ID metaerg.pl|12794
allec_ids 1.14.-.-;
allgo_ids GO:0005506; GO:0016705; GO:0020037; GO:0055114; GO:0005789; GO:0004497;
allko_ids K15001;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06548.1 1 453 evalue:1.4e-180 qcov:100.00 identity:70.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
metacyc_pathway_id PWY-699; PWY-6442; PWY-2582; FLUORENE-DEG-9-ONE-PWY; PWY-6494; P481-PWY; PWY-5479; PWY-6544; PWY-2961; PWY-1381;
metacyc_pathway_name brassinosteroid biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; brassinosteroid biosynthesis II;; fluorene degradation I;; gibberellin inactivation III (epoxidation);; adamantanone degradation;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of C28 brassinosteroid biosynthesis;; sesquiterpenoid phytoalexins biosynthesis;; fluorene degradation II;;
metacyc_pathway_type Brassinosteroid-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Brassinosteroid-Biosynthesis;; Fluorene-Degradation;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Other-Degradation;; LIGNAN-SYN;; Super-Pathways;; SESQUITERPENOID-SYN; TERPENOID-PHYTOALEXINS;; Fluorene-Degradation;;
pfam_acc PF00067;
pfam_desc Cytochrome P450;
pfam_id p450;
pfam_target db:Pfam-A.hmm|PF00067.22 evalue:8e-67 score:225.2 best_domain_score:224.9 name:p450;
sprot_desc Probable cytochrome P450 4aa1;
sprot_id sp|Q9V7G5|C4AA1_DROME;
sprot_target db:uniprot_sprot|sp|Q9V7G5|C4AA1_DROME 84 453 evalue:5.4e-22 qcov:81.70 identity:23.40;
14961 13693 CDS
ID metaerg.pl|12795
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ06549.1 15 417 evalue:5.9e-101 qcov:95.50 identity:52.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
tm_num 2;
14961 13693 transmembrane_helix
ID metaerg.pl|12796
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i14107-14175o14203-14271i;
15773 15036 CDS
ID metaerg.pl|12797
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08168.1 25 244 evalue:9.1e-86 qcov:89.80 identity:74.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:6.1e-08 score:32.0 best_domain_score:15.5 name:NUDIX;
16171 15770 CDS
ID metaerg.pl|12798
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068304131.1 1 130 evalue:3.4e-47 qcov:97.70 identity:70.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF06170;
pfam_desc Protein of unknown function (DUF983);
pfam_id DUF983;
pfam_target db:Pfam-A.hmm|PF06170.12 evalue:1.9e-28 score:97.9 best_domain_score:97.9 name:DUF983;
tm_num 2;
16171 15770 transmembrane_helix
ID metaerg.pl|12799
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i15953-16021o16034-16093i;
16391 17383 CDS
ID metaerg.pl|12800
allgo_ids GO:0030001; GO:0046872; GO:0042597; GO:0007155; GO:0006829;
allko_ids K11707;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469784.1 5 329 evalue:4.3e-131 qcov:98.50 identity:75.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF01297;
pfam_desc Zinc-uptake complex component A periplasmic;
pfam_id ZnuA;
pfam_target db:Pfam-A.hmm|PF01297.17 evalue:5.8e-60 score:202.1 best_domain_score:201.9 name:ZnuA;
sp YES;
sprot_desc Periplasmic zinc-binding protein TroA;
sprot_id sp|P96116|TROA_TREPA;
sprot_target db:uniprot_sprot|sp|P96116|TROA_TREPA 25 308 evalue:3.1e-51 qcov:86.10 identity:41.50;
16391 16471 signal_peptide
ID metaerg.pl|12801
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
17462 18232 CDS
ID metaerg.pl|12802
allgo_ids GO:0005524; GO:0016887; GO:0006829;
allko_ids K06861; K02071; K01996; K02045; K11072; K02006; K02052; K09817; K02010; K05847; K02017; K11084; K02023; K02000; K10111; K01998; K02049; K01995; K02013; K05816; K11710;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Yoonia;s__Yoonia vestfoldensis_B;
genomedb_acc GCF_002158905.1;
genomedb_target db:genomedb|GCF_002158905.1|WP_087206381.1 1 251 evalue:4.3e-123 qcov:98.00 identity:88.00;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.4e-10 score:40.0 best_domain_score:21.2 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.2e-30 score:106.0 best_domain_score:105.6 name:ABC_tran;
sprot_desc Zinc transport system ATP-binding protein TroB;
sprot_id sp|P96117|TROB_TREPA;
sprot_target db:uniprot_sprot|sp|P96117|TROB_TREPA 12 256 evalue:1.4e-75 qcov:95.70 identity:57.10;
18229 19371 CDS
ID metaerg.pl|12803
allgo_ids GO:0005887; GO:0042626; GO:0043190; GO:0055085; GO:0005886; GO:0010043;
allko_ids K09819; K11708;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469786.1 1 371 evalue:6.2e-134 qcov:97.60 identity:76.80;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00950; PF01032;
pfam_desc ABC 3 transport family; FecCD transport family;
pfam_id ABC-3; FecCD;
pfam_target db:Pfam-A.hmm|PF00950.17 evalue:1.9e-68 score:230.0 best_domain_score:229.7 name:ABC-3; db:Pfam-A.hmm|PF01032.18 evalue:3e-08 score:32.3 best_domain_score:32.3 name:FecCD;
sprot_desc Manganese transport system membrane protein MntC;
sprot_id sp|O35024|MNTC_BACSU;
sprot_target db:uniprot_sprot|sp|O35024|MNTC_BACSU 16 304 evalue:1.8e-55 qcov:76.10 identity:43.60;
tm_num 8;
18229 19371 transmembrane_helix
ID metaerg.pl|12804
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i18265-18333o18361-18414i18433-18492o18520-18588i18646-18714o18802-18870i18907-18975o18988-19056i;
19368 20507 CDS
ID metaerg.pl|12805
allgo_ids GO:0005887; GO:0042626; GO:0043190; GO:0055085; GO:0005886; GO:0010043;
allko_ids K11709;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469787.1 1 378 evalue:4.6e-161 qcov:99.70 identity:81.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00950;
pfam_desc ABC 3 transport family;
pfam_id ABC-3;
pfam_target db:Pfam-A.hmm|PF00950.17 evalue:5e-39 score:133.6 best_domain_score:132.8 name:ABC-3;
sprot_desc Manganese transport system membrane protein MntD;
sprot_id sp|O34500|MNTD_BACSU;
sprot_target db:uniprot_sprot|sp|O34500|MNTD_BACSU 8 298 evalue:8.1e-56 qcov:76.80 identity:46.90;
tm_num 9;
19368 20507 transmembrane_helix
ID metaerg.pl|12806
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology o19395-19463i19482-19541o19551-19619i19653-19712o19800-19868i19881-19949o19959-20027i20061-20129o20142-20210i;
20703 21587 CDS
ID metaerg.pl|12807
allec_ids 3.5.1.10;
allgo_ids GO:0009058; GO:0016742; GO:0008864; GO:0006189; GO:0006730;
allko_ids K11175; K11788; K11787; K01933;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus alkenifer;
genomedb_acc GCF_900108405.1;
genomedb_target db:genomedb|GCF_900108405.1|WP_090848396.1 1 294 evalue:8.5e-131 qcov:100.00 identity:78.90;
kegg_pathway_id 00670; 00230;
kegg_pathway_name One carbon pool by folate; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
metacyc_pathway_id 1CMET2-PWY; PWY-2201;
metacyc_pathway_name N10-formyl-tetrahydrofolate biosynthesis;; folate transformations I;;
metacyc_pathway_type Folate-Biosynthesis;; Folate-Transformations;;
pfam_acc PF13740; PF00551;
pfam_desc ACT domain; Formyl transferase;
pfam_id ACT_6; Formyl_trans_N;
pfam_target db:Pfam-A.hmm|PF13740.6 evalue:1.6e-05 score:24.0 best_domain_score:21.0 name:ACT_6; db:Pfam-A.hmm|PF00551.19 evalue:1.2e-38 score:131.9 best_domain_score:131.6 name:Formyl_trans_N;
sprot_desc Formyltetrahydrofolate deformylase;
sprot_id sp|Q46339|PURU_CORS1;
sprot_target db:uniprot_sprot|sp|Q46339|PURU_CORS1 3 280 evalue:8.7e-74 qcov:94.60 identity:48.70;
tigrfam_acc TIGR00655;
tigrfam_desc formyltetrahydrofolate deformylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name PurU;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00655 evalue:6.9e-100 score:333.4 best_domain_score:333.2 name:TIGR00655;
24493 21971 CDS
ID metaerg.pl|12808
allgo_ids GO:0000155; GO:0007165;
allko_ids K07642; K11711; K11356; K11640; K02484; K10909; K07704; K08282; K07677; K07708; K07645; K02491; K07643; K11231; K03407; K07637; K07654; K00936; K07682; K07649; K07777; K07652; K07641; K13598; K07646; K07639; K08475; K07673; K07711; K00873; K08884; K13533; K11328; K07778; K07683; K11354; K11633; K07768; K07651; K07718; K07698; K07679; K02478; K07648; K07650; K06379; K07676; K10681; K01769; K07644; K07709; K13532; K04757; K11629; K10125; K11357; K12767; K11383; K02486; K14509; K11520; K07769; K07675; K07717; K07680; K07647; K10942; K13040; K07674; K08479; K10916; K02668; K03388; K07640; K07710; K07656; K01768; K07697; K02489; K07716; K07653; K07638; K07636; K02482; K08801; K14489; K02480; K10715; K07678; K11527; K02030; K13587;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071478946.1 16 749 evalue:2.8e-179 qcov:87.40 identity:48.10;
kegg_pathway_id 00230; 05111; 00710; 00010; 00790; 04011; 02020; 03090; 00620;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Folate biosynthesis; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF02518; PF00512; PF12860; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; PAS_7; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:6.3e-29 score:100.0 best_domain_score:98.8 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:4.9e-21 score:73.8 best_domain_score:72.7 name:HisKA; db:Pfam-A.hmm|PF12860.7 evalue:7.5e-19 score:67.2 best_domain_score:65.6 name:PAS_7; db:Pfam-A.hmm|PF00072.24 evalue:6.2e-20 score:70.7 best_domain_score:69.5 name:Response_reg;
tm_num 2;
24493 21971 transmembrane_helix
ID metaerg.pl|12809
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology o21998-22066i22520-22588o;
25044 24490 CDS
ID metaerg.pl|12810
allgo_ids GO:0042128;
allko_ids K02016;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481197.1 1 182 evalue:2.6e-29 qcov:98.90 identity:46.20;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00174;
pfam_desc Oxidoreductase molybdopterin binding domain;
pfam_id Oxidored_molyb;
pfam_target db:Pfam-A.hmm|PF00174.19 evalue:2.8e-07 score:29.6 best_domain_score:28.2 name:Oxidored_molyb;
sp YES;
tm_num 1;
24490 24600 signal_peptide
ID metaerg.pl|12811
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
25044 24490 transmembrane_helix
ID metaerg.pl|12812
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i24526-24594o;
25200 25715 CDS
ID metaerg.pl|12813
allko_ids K02016;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Phaeobacter;s__Phaeobacter gallaeciensis;
genomedb_acc GCF_000511385.1;
genomedb_target db:genomedb|GCF_000511385.1|WP_040103982.1 31 169 evalue:8.4e-30 qcov:81.30 identity:50.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
sp YES;
tm_num 1;
25200 25313 signal_peptide
ID metaerg.pl|12814
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
25200 25715 transmembrane_helix
ID metaerg.pl|12815
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology o25242-25301i;
26581 25835 CDS
ID metaerg.pl|12816
allgo_ids GO:0004316; GO:0051287; GO:0006633; GO:0009877;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_074446615.1 4 248 evalue:1.9e-91 qcov:98.80 identity:76.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:3.5e-30 score:104.2 best_domain_score:103.9 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:6.8e-46 score:155.9 best_domain_score:155.8 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:1.1e-11 score:44.2 best_domain_score:43.8 name:KR;
sprot_desc Nodulation protein G;
sprot_id sp|P72332|NODG_RHIS3;
sprot_target db:uniprot_sprot|sp|P72332|NODG_RHIS3 1 248 evalue:1.7e-17 qcov:100.00 identity:33.10;
28080 26578 CDS
ID metaerg.pl|12817
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_074446537.1 1 496 evalue:2.8e-219 qcov:99.20 identity:83.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF01970;
pfam_desc Tripartite tricarboxylate transporter TctA family;
pfam_id TctA;
pfam_target db:Pfam-A.hmm|PF01970.16 evalue:1.2e-125 score:418.7 best_domain_score:418.7 name:TctA;
sprot_desc Uncharacterized 52.8 kDa protein in TAR-I ttuC' 3'region;
sprot_id sp|P70795|YZ2R_AGRVI;
sprot_target db:uniprot_sprot|sp|P70795|YZ2R_AGRVI 21 496 evalue:3.4e-62 qcov:95.20 identity:33.80;
tm_num 12;
28080 26578 transmembrane_helix
ID metaerg.pl|12818
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i26641-26709o26752-26820i26896-26964o26992-27060i27079-27147o27160-27228i27352-27420o27526-27594i27631-27699o27727-27795i27808-27861o27970-28038i;
28686 28183 CDS
ID metaerg.pl|12819
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_074446536.1 2 166 evalue:1.7e-35 qcov:98.80 identity:56.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF07331;
pfam_desc Tripartite tricarboxylate transporter TctB family;
pfam_id TctB;
pfam_target db:Pfam-A.hmm|PF07331.11 evalue:2.8e-18 score:65.7 best_domain_score:65.3 name:TctB;
tm_num 5;
28686 28183 transmembrane_helix
ID metaerg.pl|12820
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i28207-28260o28303-28371i28408-28476o28504-28572i28585-28653o;
29778 28801 CDS
ID metaerg.pl|12821
allgo_ids GO:0042597;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_074446535.1 4 325 evalue:2.2e-143 qcov:99.10 identity:76.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF03401;
pfam_desc Tripartite tricarboxylate transporter family receptor;
pfam_id TctC;
pfam_target db:Pfam-A.hmm|PF03401.14 evalue:2.3e-43 score:147.5 best_domain_score:147.2 name:TctC;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|Q45389|BUGT_BORPE;
sprot_target db:uniprot_sprot|sp|Q45389|BUGT_BORPE 6 291 evalue:4.4e-26 qcov:88.00 identity:30.70;
28801 28890 signal_peptide
ID metaerg.pl|12822
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
31135 29891 CDS
ID metaerg.pl|12823
allec_ids 1.4.99.-;
allgo_ids GO:0016491; GO:0055114; GO:0008718; GO:0055130;
allko_ids K00285;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_074446534.1 4 413 evalue:3.6e-175 qcov:99.00 identity:74.10;
kegg_pathway_id 00360; 00910;
kegg_pathway_name Phenylalanine metabolism; Nitrogen metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
metacyc_pathway_id PWY-6422;
metacyc_pathway_name D-arginine degradation;;
metacyc_pathway_type D-Amino-Acid-Degradation;;
pfam_acc PF01266; PF01494; PF07992;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id DAO; FAD_binding_3; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:2.3e-46 score:158.2 best_domain_score:157.8 name:DAO; db:Pfam-A.hmm|PF01494.19 evalue:3.3e-05 score:22.5 best_domain_score:22.0 name:FAD_binding_3; db:Pfam-A.hmm|PF07992.14 evalue:3.9e-07 score:28.8 best_domain_score:20.6 name:Pyr_redox_2;
sprot_desc D-amino acid dehydrogenase;
sprot_id sp|A6UB96|DADA_SINMW;
sprot_target db:uniprot_sprot|sp|A6UB96|DADA_SINMW 6 412 evalue:1.6e-28 qcov:98.30 identity:29.10;
tm_num 1;
31135 29891 transmembrane_helix
ID metaerg.pl|12824
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i29903-29956o;
32818 31142 CDS
ID metaerg.pl|12825
allec_ids 2.2.1.6;
allgo_ids GO:0003824; GO:0030976; GO:0003984; GO:0050660; GO:0000287; GO:0009097; GO:0009099;
allko_ids K12732; K12253; K01652; K03852; K01637; K01576; K04103; K01568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Salinarimonas;s__Salinarimonas sp900094735;
genomedb_acc GCF_900094735.1;
genomedb_target db:genomedb|GCF_900094735.1|WP_074446533.1 1 558 evalue:1.8e-267 qcov:100.00 identity:81.90;
kegg_pathway_id 00380; 00430; 00770; 00010; 00622; 00290; 00660; 00650; 00630; 00362;
kegg_pathway_name Tryptophan metabolism; Taurine and hypotaurine metabolism; Pantothenate and CoA biosynthesis; Glycolysis / Gluconeogenesis; Toluene and xylene degradation; Valine, leucine and isoleucine biosynthesis; C5-Branched dibasic acid metabolism; Butanoate metabolism; Glyoxylate and dicarboxylate metabolism; Benzoate degradation via hydroxylation;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
metacyc_pathway_id PWY-6396; PWY-5103; PWY-6389; PWY-5104; BRANCHED-CHAIN-AA-SYN-PWY; PWY-5939; ILEUSYN-PWY; VALSYN-PWY; PWY-5101; PWY-3001; THREOCAT-PWY; PWY-5938;
metacyc_pathway_name superpathway of 2,3-butanediol biosynthesis;; L-isoleucine biosynthesis III;; pyruvate fermentation to (S)-acetoin;; L-isoleucine biosynthesis IV;; superpathway of branched chain amino acid biosynthesis;; pyruvate fermentation to (R)-acetoin II;; L-isoleucine biosynthesis I (from threonine);; L-valine biosynthesis;; L-isoleucine biosynthesis II;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-threonine metabolism;; pyruvate fermentation to (R)-acetoin I;;
metacyc_pathway_type Butanediol-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; Super-Pathways; THREONINE-DEG;; Acetoin-Biosynthesis;;
pfam_acc PF02775; PF00205; PF02776;
pfam_desc Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain;
pfam_id TPP_enzyme_C; TPP_enzyme_M; TPP_enzyme_N;
pfam_target db:Pfam-A.hmm|PF02775.21 evalue:4.3e-36 score:123.2 best_domain_score:121.6 name:TPP_enzyme_C; db:Pfam-A.hmm|PF00205.22 evalue:1.6e-33 score:114.6 best_domain_score:113.8 name:TPP_enzyme_M; db:Pfam-A.hmm|PF02776.18 evalue:5.7e-56 score:188.0 best_domain_score:181.5 name:TPP_enzyme_N;
sprot_desc Probable acetolactate synthase large subunit;
sprot_id sp|O08353|ILVB_METAO;
sprot_target db:uniprot_sprot|sp|O08353|ILVB_METAO 1 545 evalue:4.8e-73 qcov:97.70 identity:30.90;
33034 33732 CDS
ID metaerg.pl|12826
allec_ids 1.1.1.100;
allgo_ids GO:0102131; GO:0102132; GO:0004316; GO:0051287; GO:0050661; GO:0030497;
allko_ids K00059;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCO07;s__HLUCCO07 sp003258925;
genomedb_acc GCF_003258925.1;
genomedb_target db:genomedb|GCF_003258925.1|WP_111367144.1 1 230 evalue:1.0e-94 qcov:99.10 identity:76.60;
kegg_pathway_id 00061; 01040;
kegg_pathway_name Fatty acid biosynthesis; Biosynthesis of unsaturated fatty acids;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
metacyc_pathway_id PWY-5156; PWY-5971; PWY-6519; FASYN-ELONG-PWY; PWY-5367; PWY-6113; PWY-6285; BIOTIN-BIOSYNTHESIS-PWY; PWYG-321; PWY-5973; PWY-5989; PWY0-881; PWY-6282;
metacyc_pathway_name superpathway of fatty acid biosynthesis II (plant);; palmitate biosynthesis II (bacteria and plants);; 8-amino-7-oxononanoate biosynthesis I;; fatty acid elongation -- saturated;; petroselinate biosynthesis;; superpathway of mycolate biosynthesis;; superpathway of fatty acids biosynthesis (E. coli);; biotin biosynthesis I;; mycolate biosynthesis;; cis-vaccenate biosynthesis;; stearate biosynthesis II (bacteria and plants);; superpathway of fatty acid biosynthesis I (E. coli);; palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate);;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Palmitate-Biosynthesis;; 7-Keto-8-aminopelargonate-Biosynthesis;; Fatty-acid-biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; Fatty-acid-biosynthesis;; Unsaturated-Fatty-Acids-Biosynthesis;; Stearate-Biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; Palmitoleate-Biosynthesis;;
pfam_acc PF00106; PF13561;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase;
pfam_id adh_short; adh_short_C2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:7.8e-24 score:83.4 best_domain_score:83.1 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:1.1e-38 score:132.3 best_domain_score:131.7 name:adh_short_C2;
sprot_desc 3-oxoacyl-[acyl-carrier-protein] reductase FabG;
sprot_id sp|P38004|FABG_CHLTR;
sprot_target db:uniprot_sprot|sp|P38004|FABG_CHLTR 4 227 evalue:2.8e-19 qcov:96.60 identity:30.30;
36063 33856 CDS
ID metaerg.pl|12827
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482437.1 1 733 evalue:1.9e-288 qcov:99.70 identity:70.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF13175; PF13304;
pfam_desc AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system;
pfam_id AAA_15; AAA_21;
pfam_target db:Pfam-A.hmm|PF13175.6 evalue:1.5e-16 score:60.3 best_domain_score:39.9 name:AAA_15; db:Pfam-A.hmm|PF13304.6 evalue:2.7e-14 score:52.9 best_domain_score:38.9 name:AAA_21;
37846 36035 CDS
ID metaerg.pl|12828
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386204.1 1 583 evalue:3.5e-187 qcov:96.70 identity:62.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:4.5e-27 score:94.2 best_domain_score:94.2 name:Proton_antipo_M;
tm_num 14;
37846 36035 transmembrane_helix
ID metaerg.pl|12829
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i36053-36121o36236-36289i36326-36385o36395-36454i36491-36550o36608-36676i36713-36781o36809-36862i36881-36940o36968-37036i37073-37141o37184-37252i37310-37378o37421-37480i;
39365 37851 CDS
ID metaerg.pl|12830
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
allko_ids K05568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469520.1 10 501 evalue:2.8e-230 qcov:97.60 identity:86.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00361; PF00662;
pfam_desc Proton-conducting membrane transporter; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus;
pfam_id Proton_antipo_M; Proton_antipo_N;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:2.3e-57 score:193.7 best_domain_score:192.8 name:Proton_antipo_M; db:Pfam-A.hmm|PF00662.20 evalue:5.7e-07 score:28.8 best_domain_score:26.8 name:Proton_antipo_N;
sprot_desc NADH-quinone oxidoreductase subunit N;
sprot_id sp|B1I6I5|NUON_DESAP;
sprot_target db:uniprot_sprot|sp|B1I6I5|NUON_DESAP 14 480 evalue:5.5e-52 qcov:92.70 identity:37.00;
tm_num 13;
39365 37851 transmembrane_helix
ID metaerg.pl|12831
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology o37893-37952i37989-38057o38115-38183i38202-38261o38271-38330i38367-38435o38493-38561i38565-38633o38691-38759i38820-38888o39000-39068i39105-39173o39231-39299i;
40819 39362 CDS
ID metaerg.pl|12832
allec_ids 7.1.1.-;
allgo_ids GO:0016021; GO:0005886; GO:0008137; GO:0048038; GO:0042773;
allko_ids K05568;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482440.1 10 485 evalue:7.5e-209 qcov:98.10 identity:81.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:4e-45 score:153.5 best_domain_score:152.9 name:Proton_antipo_M;
sprot_desc NADH-quinone oxidoreductase subunit N;
sprot_id sp|B1I6I5|NUON_DESAP;
sprot_target db:uniprot_sprot|sp|B1I6I5|NUON_DESAP 13 427 evalue:1.0e-47 qcov:85.60 identity:34.80;
tm_num 14;
40819 39362 transmembrane_helix
ID metaerg.pl|12833
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology o39389-39445i39464-39532o39590-39658i39692-39745o39755-39823i39860-39919o39977-40045i40064-40132o40160-40228i40247-40312o40340-40408i40469-40537o40580-40648i40724-40792o;
41174 40809 CDS
ID metaerg.pl|12834
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469518.1 16 108 evalue:3.6e-35 qcov:76.90 identity:88.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00420;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
pfam_id Oxidored_q2;
pfam_target db:Pfam-A.hmm|PF00420.24 evalue:4.2e-11 score:41.6 best_domain_score:41.2 name:Oxidored_q2;
tm_num 3;
41174 40809 transmembrane_helix
ID metaerg.pl|12835
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology o40866-40928i40947-41006o41034-41102i;
42148 41174 CDS
ID metaerg.pl|12836
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482442.1 1 322 evalue:9.0e-134 qcov:99.40 identity:81.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF13244; PF04039;
pfam_desc Domain of unknown function (DUF4040); Domain related to MnhB subunit of Na+/H+ antiporter;
pfam_id DUF4040; MnhB;
pfam_target db:Pfam-A.hmm|PF13244.6 evalue:1.1e-17 score:63.2 best_domain_score:63.2 name:DUF4040; db:Pfam-A.hmm|PF04039.13 evalue:1.5e-11 score:43.9 best_domain_score:43.9 name:MnhB;
tm_num 9;
42148 41174 transmembrane_helix
ID metaerg.pl|12837
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology o41186-41245i41258-41326o41336-41389i41480-41548o41639-41707i41741-41809o41837-41905i41942-42010o42038-42106i;
42440 42141 CDS
ID metaerg.pl|12838
allgo_ids GO:0005451; GO:0015672; GO:1902600;
allko_ids K05571;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469516.1 1 92 evalue:9.2e-29 qcov:92.90 identity:75.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF03334;
pfam_desc Na+/H+ antiporter subunit;
pfam_id PhaG_MnhG_YufB;
pfam_target db:Pfam-A.hmm|PF03334.14 evalue:5e-22 score:77.2 best_domain_score:76.9 name:PhaG_MnhG_YufB;
sprot_desc hypothetical protein;
sprot_id sp|O58672|Y944_PYRHO;
sprot_target db:uniprot_sprot|sp|O58672|Y944_PYRHO 5 90 evalue:3.1e-07 qcov:86.90 identity:37.20;
tm_num 3;
42440 42141 transmembrane_helix
ID metaerg.pl|12839
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i42153-42221o42264-42320i42333-42401o;
42700 42440 CDS
ID metaerg.pl|12840
allgo_ids GO:0015075; GO:0016021; GO:0034220;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482444.1 1 86 evalue:4.8e-18 qcov:100.00 identity:74.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF04066;
pfam_desc Multiple resistance and pH regulation protein F (MrpF / PhaF);
pfam_id MrpF_PhaF;
pfam_target db:Pfam-A.hmm|PF04066.13 evalue:1.1e-08 score:34.6 best_domain_score:34.6 name:MrpF_PhaF;
tm_num 3;
42700 42440 transmembrane_helix
ID metaerg.pl|12841
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology o42449-42502i42539-42607o42617-42685i;
43356 42730 CDS
ID metaerg.pl|12842
allgo_ids GO:0006812; GO:0008324; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386203.1 25 204 evalue:8.6e-45 qcov:86.50 identity:58.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF01899;
pfam_desc Na+/H+ ion antiporter subunit;
pfam_id MNHE;
pfam_target db:Pfam-A.hmm|PF01899.16 evalue:6.1e-24 score:83.7 best_domain_score:83.3 name:MNHE;
tm_num 2;
43356 42730 transmembrane_helix
ID metaerg.pl|12843
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology o42880-42933i42952-43020o;
43552 43926 CDS
ID metaerg.pl|12844
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469514.1 4 100 evalue:4.7e-22 qcov:78.20 identity:57.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
45270 44275 CDS
ID metaerg.pl|12845
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084635176.1 1 330 evalue:4.7e-154 qcov:99.70 identity:81.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF10095;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2333);
pfam_id DUF2333;
pfam_target db:Pfam-A.hmm|PF10095.9 evalue:4.7e-17 score:61.2 best_domain_score:36.4 name:DUF2333;
tm_num 1;
45270 44275 transmembrane_helix
ID metaerg.pl|12846
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i44380-44448o;
45467 45982 CDS
ID metaerg.pl|12847
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0003677; GO:0016987;
allko_ids K03088;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084635186.1 1 167 evalue:3.1e-64 qcov:97.70 identity:77.20;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF04542; PF04545; PF08281;
pfam_desc Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF04542.14 evalue:6.8e-16 score:57.0 best_domain_score:55.4 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:8.3e-10 score:37.3 best_domain_score:36.3 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:3.4e-14 score:51.5 best_domain_score:50.4 name:Sigma70_r4_2;
sprot_desc ECF RNA polymerase sigma factor EcfG;
sprot_id sp|B3Q6P8|ECFG_RHOPT;
sprot_target db:uniprot_sprot|sp|B3Q6P8|ECFG_RHOPT 2 153 evalue:1.4e-20 qcov:88.90 identity:39.00;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:1.8e-20 score:72.4 best_domain_score:72.1 name:TIGR02937;
45979 46776 CDS
ID metaerg.pl|12848
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482400.1 6 265 evalue:7.1e-68 qcov:98.10 identity:54.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
47375 48082 CDS
ID metaerg.pl|12849
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0006355;
allko_ids K07637; K03407; K07682; K07654; K07652; K07673; K01120; K07639; K08475; K07646; K07641; K08884; K07711; K02575; K07768; K11354; K07778; K07718; K07651; K07648; K02478; K07679; K07642; K11711; K11640; K11356; K02484; K00760; K08282; K01937; K10909; K07704; K07708; K07645; K07677; K02491; K11231; K10916; K08479; K03388; K02668; K01768; K07710; K07716; K02489; K07636; K07653; K02480; K02482; K07678; K10715; K02030; K11527; K07676; K10681; K06379; K07650; K07644; K07709; K11357; K10125; K04757; K02486; K13761; K11383; K12767; K07717; K07675; K07647; K13584;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246370.1 1 220 evalue:2.2e-65 qcov:93.60 identity:57.90;
kegg_pathway_id 00230; 05111; 00240; 00983; 00790; 02020; 04011; 03090;
kegg_pathway_name Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; Drug metabolism - other enzymes; Folate biosynthesis; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:6.3e-27 score:93.2 best_domain_score:92.6 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:8.2e-19 score:66.7 best_domain_score:65.7 name:Trans_reg_C;
sprot_desc Cell cycle response regulator CtrA;
sprot_id sp|A6WZ81|CTRA_OCHA4;
sprot_target db:uniprot_sprot|sp|A6WZ81|CTRA_OCHA4 1 227 evalue:4.2e-55 qcov:96.60 identity:50.40;
48764 48144 CDS
ID metaerg.pl|12850
allgo_ids GO:0006355; GO:0005737; GO:0003677; GO:0000160;
allko_ids K02668; K03388; K07716; K07710; K02482; K02480; K07653; K07636; K10715; K04757; K11357; K07647; K07675; K07654; K07682; K03407; K07646; K07641; K07673; K07652; K07778; K07648; K07642; K02484; K07677; K11231; K11618;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068303399.1 1 205 evalue:1.1e-71 qcov:99.50 identity:69.30;
kegg_pathway_id 00790; 04011; 02020; 03090;
kegg_pathway_name Folate biosynthesis; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00196; PF00072; PF04545; PF08281;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain; Sigma-70, region 4; Sigma-70, region 4;
pfam_id GerE; Response_reg; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:4.6e-19 score:67.0 best_domain_score:66.4 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:2.5e-18 score:65.5 best_domain_score:65.1 name:Response_reg; db:Pfam-A.hmm|PF04545.16 evalue:1.8e-06 score:26.6 best_domain_score:25.3 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:8.8e-08 score:30.9 best_domain_score:29.9 name:Sigma70_r4_2;
sprot_desc Transcriptional regulatory protein LiaR;
sprot_id sp|O32197|LIAR_BACSU;
sprot_target db:uniprot_sprot|sp|O32197|LIAR_BACSU 1 206 evalue:5.4e-22 qcov:100.00 identity:34.10;
51693 48829 CDS
ID metaerg.pl|12851
allgo_ids GO:0005515;
allko_ids K11356; K11640; K04486; K02484; K07642; K11711; K02491; K01090; K07643; K11231; K07704; K10909; K08282; K07645; K07708; K07677; K07652; K07646; K13598; K07641; K01120; K04093; K07673; K07639; K08475; K03407; K07654; K07777; K07649; K07682; K00936; K07651; K07698; K07718; K02478; K07679; K07648; K00873; K07711; K11328; K13533; K07683; K11354; K07778; K11633; K02575; K07768; K07644; K13532; K07709; K07676; K10681; K06379; K01769; K04518; K11637; K07717; K07675; K07680; K07647; K10942; K13040; K04757; K11617; K02476; K11357; K11629; K10125; K02342; K02486; K11383; K12767; K11520; K07769; K14509; K07640; K07710; K01768; K07656; K07697; K02489; K11614; K07716; K07674; K08479; K10916; K02668; K03388; K07678; K10715; K13587; K11527; K02030; K07701; K07653; K07638; K07636; K14489; K02482; K08801; K02480;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072246369.1 13 947 evalue:7.0e-259 qcov:98.00 identity:50.30;
kegg_pathway_id 00620; 03090; 02020; 04011; 00340; 00790; 00010; 00710; 03030; 00400; 05111; 00230;
kegg_pathway_name Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Histidine metabolism; Folate biosynthesis; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; DNA replication; Phenylalanine, tyrosine and tryptophan biosynthesis; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF01590; PF13185; PF02518; PF00989; PF08447; PF08448; PF12860; PF13188; PF13426;
pfam_desc GAF domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain;
pfam_id GAF; GAF_2; HATPase_c; PAS; PAS_3; PAS_4; PAS_7; PAS_8; PAS_9;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:1.2e-07 score:31.7 best_domain_score:28.6 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:4.2e-10 score:39.3 best_domain_score:29.5 name:GAF_2; db:Pfam-A.hmm|PF02518.26 evalue:2.2e-18 score:66.0 best_domain_score:65.1 name:HATPase_c; db:Pfam-A.hmm|PF00989.25 evalue:1.4e-30 score:104.8 best_domain_score:48.2 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:4.8e-09 score:35.6 best_domain_score:27.0 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:1.7e-34 score:117.6 best_domain_score:46.9 name:PAS_4; db:Pfam-A.hmm|PF12860.7 evalue:1.2e-23 score:82.7 best_domain_score:62.4 name:PAS_7; db:Pfam-A.hmm|PF13188.7 evalue:7e-17 score:60.3 best_domain_score:20.6 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:3.6e-36 score:122.8 best_domain_score:60.2 name:PAS_9;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:4.1e-37 score:126.3 best_domain_score:64.8 name:TIGR00229;
53990 51693 CDS
ID metaerg.pl|12852
allgo_ids GO:0000155; GO:0007165;
allko_ids K14489; K08801; K02482; K02480; K07653; K07638; K07636; K13587; K02030; K11527; K07678; K10715; K02668; K03388; K08479; K07674; K10916; K07697; K02489; K07716; K07710; K07640; K01768; K07656; K13761; K11383; K02486; K12767; K07769; K11520; K14509; K04757; K11617; K11357; K11629; K10125; K07680; K07647; K13040; K10942; K07717; K07675; K01769; K07650; K07676; K10681; K06379; K13532; K07709; K07644; K07683; K11354; K07778; K11633; K07768; K08884; K07711; K00873; K11328; K13533; K02478; K07679; K07648; K11623; K07651; K07698; K07718; K07654; K07777; K00936; K07682; K07649; K03407; K07637; K07646; K07641; K13598; K01120; K07673; K07639; K08475; K07652; K07708; K07645; K07677; K07704; K10909; K08282; K01937; K11231; K07643; K13490; K02491; K11711; K07642; K00760; K02484; K11356; K11640;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068303405.1 3 761 evalue:5.2e-204 qcov:99.20 identity:54.50;
kegg_pathway_id 00790; 00620; 03090; 02020; 04011; 00240; 05111; 00230; 00983; 00710; 00010;
kegg_pathway_name Folate biosynthesis; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Pyrimidine metabolism; Vibrio cholerae pathogenic cycle; Purine metabolism; Drug metabolism - other enzymes; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF02518; PF00512; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:6.3e-30 score:103.2 best_domain_score:102.2 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.4e-14 score:53.1 best_domain_score:53.1 name:HisKA; db:Pfam-A.hmm|PF00072.24 evalue:8e-28 score:96.1 best_domain_score:95.0 name:Response_reg;
tm_num 2;
53990 51693 transmembrane_helix
ID metaerg.pl|12853
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology o51705-51758i52209-52277o;
54562 54041 CDS
ID metaerg.pl|12854
allko_ids K02016;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072247651.1 11 173 evalue:9.0e-48 qcov:94.20 identity:60.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
sp YES;
54041 54118 signal_peptide
ID metaerg.pl|12855
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
57092 54696 CDS
ID metaerg.pl|12856
allgo_ids GO:0000155; GO:0007165;
allko_ids K07676; K10681; K06379; K07650; K01769; K07644; K07709; K11357; K02342; K10125; K11629; K04757; K11617; K11520; K07769; K14509; K02486; K13761; K11383; K12767; K07717; K07675; K13040; K10942; K07647; K07680; K10916; K08479; K07674; K03388; K02668; K01768; K07656; K07710; K07640; K07716; K02489; K07697; K07636; K07653; K07638; K02480; K14489; K02482; K08801; K07678; K10715; K02026; K13587; K11527; K02030; K07642; K11711; K11640; K04486; K11356; K00760; K02484; K08282; K01937; K10909; K07704; K07708; K07677; K07645; K13490; K02491; K07643; K11231; K07637; K03407; K07777; K07682; K00936; K07649; K07654; K07652; K07673; K01120; K08475; K07639; K07646; K07641; K11328; K13533; K08884; K00873; K07711; K11633; K02575; K07768; K07683; K11354; K07778; K07698; K07718; K11623; K07651; K07648; K02478; K07679;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068303408.1 1 789 evalue:2.3e-202 qcov:98.90 identity:51.80;
kegg_pathway_id 00710; 00010; 00983; 00230; 05111; 00240; 03030; 04011; 02020; 03090; 00620; 00790; 00340;
kegg_pathway_name Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Drug metabolism - other enzymes; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; DNA replication; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Pyruvate metabolism; Folate biosynthesis; Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF02518; PF00512; PF00989; PF08448; PF13426; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS domain; Response regulator receiver domain;
pfam_id HATPase_c; HisKA; PAS; PAS_4; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:7.8e-22 score:77.1 best_domain_score:76.2 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:8.1e-14 score:50.7 best_domain_score:50.4 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:5.2e-13 score:48.2 best_domain_score:26.6 name:PAS; db:Pfam-A.hmm|PF08448.10 evalue:1.1e-19 score:70.0 best_domain_score:34.2 name:PAS_4; db:Pfam-A.hmm|PF13426.7 evalue:1.3e-13 score:50.3 best_domain_score:26.3 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:8.8e-49 score:163.6 best_domain_score:88.5 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.1e-14 score:53.8 best_domain_score:27.6 name:TIGR00229;
57701 57231 CDS
ID metaerg.pl|12857
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
60033 57748 CDS
ID metaerg.pl|12858
allgo_ids GO:0005509;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071469281.1 10 682 evalue:1.0e-71 qcov:88.40 identity:30.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00353;
pfam_desc RTX calcium-binding nonapeptide repeat (4 copies);
pfam_id HemolysinCabind;
pfam_target db:Pfam-A.hmm|PF00353.19 evalue:2e-11 score:42.8 best_domain_score:28.0 name:HemolysinCabind;
61981 60449 CDS
ID metaerg.pl|12859
allec_ids 1.-.-.-;
allgo_ids GO:0016491; GO:0055114; GO:0004497;
allko_ids K00266; K10215;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__TH137;s__TH137 sp000500915;
genomedb_acc GCA_000500915.1;
genomedb_target db:genomedb|GCA_000500915.1|ESW60787.1 1 499 evalue:1.4e-205 qcov:97.80 identity:71.40;
kegg_pathway_id 00632; 00910; 00251;
kegg_pathway_name Benzoate degradation via CoA ligation; Nitrogen metabolism; Glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-5469; PWY-5987; PWY-5479; PWY-5826; PWY-2821; PWY-4302; PWY-5271;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; hypoglycin biosynthesis;; glucosinolate biosynthesis from phenylalanine;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; GLUCOSINOLATE-SYN;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;;
pfam_acc PF01593; PF01266; PF00890; PF01494; PF00743; PF13434; PF13241; PF13450; PF13454; PF00070; PF07992; PF13738;
pfam_desc Flavin containing amine oxidoreductase; FAD dependent oxidoreductase; FAD binding domain; FAD binding domain; Flavin-binding monooxygenase-like; L-lysine 6-monooxygenase (NADPH-requiring); Putative NAD(P)-binding; NAD(P)-binding Rossmann-like domain; FAD-NAD(P)-binding; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Amino_oxidase; DAO; FAD_binding_2; FAD_binding_3; FMO-like; K_oxygenase; NAD_binding_7; NAD_binding_8; NAD_binding_9; Pyr_redox; Pyr_redox_2; Pyr_redox_3;
pfam_target db:Pfam-A.hmm|PF01593.24 evalue:1.4e-06 score:27.1 best_domain_score:24.6 name:Amino_oxidase; db:Pfam-A.hmm|PF01266.24 evalue:1.3e-10 score:40.6 best_domain_score:27.7 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:1.1e-05 score:24.0 best_domain_score:23.3 name:FAD_binding_2; db:Pfam-A.hmm|PF01494.19 evalue:3.1e-05 score:22.6 best_domain_score:18.1 name:FAD_binding_3; db:Pfam-A.hmm|PF00743.19 evalue:7.8e-39 score:132.7 best_domain_score:129.3 name:FMO-like; db:Pfam-A.hmm|PF13434.6 evalue:9.7e-09 score:34.0 best_domain_score:27.9 name:K_oxygenase; db:Pfam-A.hmm|PF13241.6 evalue:2e-06 score:27.4 best_domain_score:15.5 name:NAD_binding_7; db:Pfam-A.hmm|PF13450.6 evalue:8e-13 score:47.7 best_domain_score:46.4 name:NAD_binding_8; db:Pfam-A.hmm|PF13454.6 evalue:1.7e-07 score:30.6 best_domain_score:19.7 name:NAD_binding_9; db:Pfam-A.hmm|PF00070.27 evalue:1e-10 score:41.2 best_domain_score:24.6 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:5.9e-19 score:67.6 best_domain_score:60.5 name:Pyr_redox_2; db:Pfam-A.hmm|PF13738.6 evalue:4.9e-20 score:71.2 best_domain_score:63.1 name:Pyr_redox_3;
sp YES;
sprot_desc FAD-dependent monooxygenase DEP4;
sprot_id sp|A0A0M9ER62|DEP4_FUSLA;
sprot_target db:uniprot_sprot|sp|A0A0M9ER62|DEP4_FUSLA 3 506 evalue:8.7e-21 qcov:98.80 identity:23.60;
60449 60502 signal_peptide
ID metaerg.pl|12860
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
62779 62003 CDS
ID metaerg.pl|12861
allec_ids 1.1.1.331;
allgo_ids GO:0003824; GO:0050662; GO:0102911; GO:0009807;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__WD3A24;s__WD3A24 sp002967695;
genomedb_acc GCF_002967695.1;
genomedb_target db:genomedb|GCF_002967695.1|WP_105319622.1 1 258 evalue:6.5e-119 qcov:100.00 identity:84.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00106; PF13561; PF01370; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; NAD dependent epimerase/dehydratase family; KR domain;
pfam_id adh_short; adh_short_C2; Epimerase; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:5.4e-36 score:123.1 best_domain_score:122.7 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.4e-58 score:196.7 best_domain_score:196.5 name:adh_short_C2; db:Pfam-A.hmm|PF01370.21 evalue:1e-07 score:30.9 best_domain_score:29.7 name:Epimerase; db:Pfam-A.hmm|PF08659.10 evalue:4.3e-06 score:26.0 best_domain_score:24.1 name:KR;
sprot_desc Secoisolariciresinol dehydrogenase;
sprot_id sp|Q94KL7|SILD_FORIN;
sprot_target db:uniprot_sprot|sp|Q94KL7|SILD_FORIN 2 242 evalue:4.5e-26 qcov:93.40 identity:31.10;
62879 63871 CDS
ID metaerg.pl|12862
allgo_ids GO:0003700; GO:0006355; GO:0043565; GO:0019439;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__TH137;s__TH137 sp002855575;
genomedb_acc GCF_002855575.1;
genomedb_target db:genomedb|GCF_002855575.1|WP_101922320.1 14 328 evalue:4.5e-104 qcov:95.50 identity:63.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF14525; PF12833; PF00165;
pfam_desc AraC-binding-like domain; Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id AraC_binding_2; HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF14525.6 evalue:5.5e-41 score:139.3 best_domain_score:139.3 name:AraC_binding_2; db:Pfam-A.hmm|PF12833.7 evalue:2.2e-26 score:91.1 best_domain_score:90.0 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:3.6e-10 score:38.9 best_domain_score:21.3 name:HTH_AraC;
sprot_desc Anthranilate 1,2-dioxygenase regulatory protein;
sprot_id sp|Q84BZ4|ANDR_BURCE;
sprot_target db:uniprot_sprot|sp|Q84BZ4|ANDR_BURCE 17 326 evalue:1.1e-29 qcov:93.90 identity:32.80;
64871 65353 CDS
ID metaerg.pl|12863
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
sp YES;
64871 64972 signal_peptide
ID metaerg.pl|12864
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
65337 65891 CDS
ID metaerg.pl|12865
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795481.1 1 183 evalue:1.0e-36 qcov:99.50 identity:51.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
69965 66120 CDS
ID metaerg.pl|12866
allgo_ids GO:0005515;
allko_ids K10909; K07704; K08282; K01937; K07677; K07645; K07708; K02491; K01090; K11231; K07643; K07642; K11711; K11356; K11640; K04486; K02484; K00760; K07711; K13533; K07683; K11354; K07778; K11633; K02575; K07768; K11623; K07651; K07698; K07718; K02478; K07679; K07648; K03407; K07637; K07654; K07777; K00936; K07682; K07649; K07652; K07646; K13598; K07641; K07673; K04093; K01120; K07639; K08475; K04757; K11617; K11357; K02476; K02342; K11629; K10125; K11383; K02486; K12767; K07769; K14509; K11637; K07717; K07675; K07647; K07680; K10942; K13040; K10681; K07676; K06379; K01769; K04518; K07644; K13532; K07709; K07638; K07653; K07636; K14489; K08801; K02482; K02480; K07678; K10715; K13587; K11527; K02030; K07701; K07674; K08479; K10916; K02668; K03388; K07710; K07640; K01768; K07656; K07697; K02489; K07716; K11614;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480116.1 1 1255 evalue:7.4e-288 qcov:98.00 identity:45.40;
kegg_pathway_id 00983; 05111; 00230; 00400; 00240; 03030; 02020; 04011; 03090; 00790; 00340;
kegg_pathway_name Drug metabolism - other enzymes; Vibrio cholerae pathogenic cycle; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism; DNA replication; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system; Folate biosynthesis; Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF01590; PF13185; PF02518; PF00512; PF00989; PF08447; PF08448; PF13188; PF13426; PF00072;
pfam_desc GAF domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id GAF; GAF_2; HATPase_c; HisKA; PAS; PAS_3; PAS_4; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:1.1e-10 score:41.5 best_domain_score:38.5 name:GAF; db:Pfam-A.hmm|PF13185.6 evalue:4.3e-10 score:39.3 best_domain_score:31.7 name:GAF_2; db:Pfam-A.hmm|PF02518.26 evalue:3.1e-13 score:49.5 best_domain_score:47.9 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:1.3e-08 score:34.0 best_domain_score:31.8 name:HisKA; db:Pfam-A.hmm|PF00989.25 evalue:6.7e-28 score:96.2 best_domain_score:43.5 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:4.5e-16 score:58.2 best_domain_score:26.0 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:7.7e-44 score:147.7 best_domain_score:39.2 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:1.1e-19 score:69.3 best_domain_score:23.7 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:1.9e-33 score:114.1 best_domain_score:47.6 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:1.2e-14 score:53.6 best_domain_score:52.5 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:9.5e-44 score:147.7 best_domain_score:61.0 name:TIGR00229;
70678 70031 CDS
ID metaerg.pl|12867
allgo_ids GO:0006355; GO:0005524; GO:0003677; GO:0042128; GO:0000160;
allko_ids K12767; K11357; K04757; K07647; K07675; K06379; K07676; K02480; K02482; K07636; K07653; K10715; K03388; K02668; K07716; K07710; K07677; K08282; K11231; K07642; K02484; K07768; K07778; K07648; K07682; K07654; K03407; K07673; K07641; K07646; K07684;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084634765.1 1 215 evalue:8.3e-67 qcov:100.00 identity:59.50;
kegg_pathway_id 03090; 04011; 02020; 00790;
kegg_pathway_name Type II secretion system; MAPK signaling pathway - yeast; Two-component system - General; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF00196; PF00072;
pfam_desc Bacterial regulatory proteins, luxR family; Response regulator receiver domain;
pfam_id GerE; Response_reg;
pfam_target db:Pfam-A.hmm|PF00196.19 evalue:4.5e-14 score:51.0 best_domain_score:50.2 name:GerE; db:Pfam-A.hmm|PF00072.24 evalue:2.7e-17 score:62.2 best_domain_score:61.4 name:Response_reg;
sprot_desc Nitrate/nitrite response regulator protein NarL;
sprot_id sp|P0AF30|NARL_ECO57;
sprot_target db:uniprot_sprot|sp|P0AF30|NARL_ECO57 13 207 evalue:5.3e-20 qcov:90.70 identity:35.90;
73655 71244 CDS
ID metaerg.pl|12868
allgo_ids GO:0006355;
allko_ids K11711; K07642; K02484; K11356; K11640; K04486; K07708; K07645; K07677; K07704; K08282; K01937; K07643; K11231; K02491; K01090; K07654; K07777; K00936; K07649; K07682; K03407; K07637; K07646; K13598; K07641; K01120; K07673; K07639; K08475; K07652; K07683; K11354; K07778; K11633; K07768; K02575; K07711; K13533; K02478; K07679; K07648; K07651; K07698; K07718; K01769; K07676; K10681; K06379; K07709; K07644; K02486; K11383; K12767; K07769; K04757; K11357; K02342; K11629; K10125; K07647; K07680; K10942; K13040; K07717; K07675; K02668; K03388; K08479; K10916; K07697; K02489; K07716; K07710; K07640; K01768; K07656; K08801; K02482; K02480; K07638; K07653; K07636; K13587; K11527; K02030; K07678; K10715;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386267.1 19 802 evalue:1.8e-263 qcov:97.60 identity:60.40;
kegg_pathway_id 05111; 00230; 00240; 03030; 00790; 00340; 02020; 04011; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; DNA replication; Folate biosynthesis; Histidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
pfam_acc PF02518; PF00989; PF08447; PF08448; PF13188; PF13426; PF00072;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; PAS fold; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id HATPase_c; PAS; PAS_3; PAS_4; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:3.5e-12 score:46.1 best_domain_score:45.3 name:HATPase_c; db:Pfam-A.hmm|PF00989.25 evalue:1.9e-08 score:33.5 best_domain_score:14.2 name:PAS; db:Pfam-A.hmm|PF08447.12 evalue:3.1e-31 score:106.8 best_domain_score:43.0 name:PAS_3; db:Pfam-A.hmm|PF08448.10 evalue:5.4e-10 score:38.7 best_domain_score:17.3 name:PAS_4; db:Pfam-A.hmm|PF13188.7 evalue:2.6e-07 score:29.8 best_domain_score:20.4 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:5.7e-07 score:29.0 best_domain_score:14.9 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:1.7e-13 score:49.9 best_domain_score:48.9 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:1.4e-14 score:53.4 best_domain_score:24.8 name:TIGR00229;
74044 74373 CDS
ID metaerg.pl|12869
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
74957 75553 CDS
ID metaerg.pl|12870
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
tm_num 2;
74957 75553 transmembrane_helix
ID metaerg.pl|12871
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i75056-75124o75137-75190i;
75582 76016 CDS
ID metaerg.pl|12872
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
tm_num 2;
75582 76016 transmembrane_helix
ID metaerg.pl|12873
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.43377; 27.6016; 0.73994; 23.3882; 0.0396747;
topology i75675-75743o75771-75839i;
>Feature NODE_278_length_54558_cov_93.7421
758 1 bac_16SrRNA
ID metaerg.pl|12874
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|MEHT01000048.404.1852 1 754 evalue:0.0 qcov:99 identity:97.878;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseinatronobacter;
3145 1331 CDS
ID metaerg.pl|12875
allec_ids 3.6.3.41;
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0003677; GO:0004832; GO:0006438;
allko_ids K01997; K02056; K02010; K09817; K05847; K02052; K02006; K02032; K02017; K02071; K06861; K01996; K10441; K11072; K02045; K01995; K02049; K10111; K01998; K05816; K09687; K02013; K02193; K01990; K02023; K15738;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797116.1 1 601 evalue:4.7e-293 qcov:99.50 identity:87.70;
kegg_pathway_id 02010; 00910;
kegg_pathway_name ABC transporters - General; Nitrogen metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF00004; PF13304; PF13401; PF13476; PF13555; PF00005; PF16326; PF01926; PF05729; PF03193; PF02463;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; AAA domain; P-loop containing region of AAA domain; ABC transporter; ABC transporter C-terminal domain; 50S ribosome-binding GTPase; NACHT domain; RsgA GTPase; RecF/RecN/SMC N terminal domain;
pfam_id AAA; AAA_21; AAA_22; AAA_23; AAA_29; ABC_tran; ABC_tran_CTD; MMR_HSR1; NACHT; RsgA_GTPase; SMC_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:0.00012 score:21.7 best_domain_score:14.1 name:AAA; db:Pfam-A.hmm|PF13304.6 evalue:2.1e-20 score:73.0 best_domain_score:20.9 name:AAA_21; db:Pfam-A.hmm|PF13401.6 evalue:7.8e-08 score:31.9 best_domain_score:17.2 name:AAA_22; db:Pfam-A.hmm|PF13476.6 evalue:1.1e-07 score:31.7 best_domain_score:16.1 name:AAA_23; db:Pfam-A.hmm|PF13555.6 evalue:1.3e-08 score:33.7 best_domain_score:19.6 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:4.3e-49 score:165.8 best_domain_score:87.4 name:ABC_tran; db:Pfam-A.hmm|PF16326.5 evalue:4e-17 score:61.5 best_domain_score:60.1 name:ABC_tran_CTD; db:Pfam-A.hmm|PF01926.23 evalue:9e-07 score:28.2 best_domain_score:12.9 name:MMR_HSR1; db:Pfam-A.hmm|PF05729.12 evalue:2.5e-06 score:26.7 best_domain_score:12.9 name:NACHT; db:Pfam-A.hmm|PF03193.16 evalue:2e-07 score:30.3 best_domain_score:18.2 name:RsgA_GTPase; db:Pfam-A.hmm|PF02463.19 evalue:1.1e-12 score:47.1 best_domain_score:17.5 name:SMC_N;
sprot_desc Holdfast attachment protein C;
sprot_id sp|Q45978|HFAC_CAUVC;
sprot_target db:uniprot_sprot|sp|Q45978|HFAC_CAUVC 2 545 evalue:4.8e-135 qcov:90.10 identity:47.70;
tigrfam_acc TIGR01189;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:1.8e-43 score:147.7 best_domain_score:77.5 name:TIGR01189;
3479 3195 CDS
ID metaerg.pl|12876
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797115.1 1 94 evalue:2.0e-25 qcov:100.00 identity:66.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
7515 3565 CDS
ID metaerg.pl|12877
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797114.1 1 1316 evalue:0.0e+00 qcov:100.00 identity:76.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF13547; PF13550;
pfam_desc GTA TIM-barrel-like domain; Putative phage tail protein;
pfam_id GTA_TIM; Phage-tail_3;
pfam_target db:Pfam-A.hmm|PF13547.6 evalue:1.3e-143 score:476.9 best_domain_score:476.4 name:GTA_TIM; db:Pfam-A.hmm|PF13550.6 evalue:7.4e-34 score:116.2 best_domain_score:115.1 name:Phage-tail_3;
tm_num 1;
7515 3565 transmembrane_helix
ID metaerg.pl|12878
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
topology i3583-3651o;
7951 7520 CDS
ID metaerg.pl|12879
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797113.1 11 138 evalue:2.8e-55 qcov:89.50 identity:77.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
tigrfam_acc TIGR02219;
tigrfam_desc putative phage cell wall peptidase, NlpC/P60 family;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name phage_NlpC_fam;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02219 evalue:5.8e-40 score:136.0 best_domain_score:135.8 name:TIGR02219;
8826 7951 CDS
ID metaerg.pl|12880
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797112.1 1 291 evalue:6.0e-129 qcov:100.00 identity:77.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF09931; PF09356;
pfam_desc Uncharacterized conserved protein (DUF2163); Phage conserved hypothetical protein BR0599;
pfam_id DUF2163; Phage_BR0599;
pfam_target db:Pfam-A.hmm|PF09931.9 evalue:1.9e-55 score:186.7 best_domain_score:185.8 name:DUF2163; db:Pfam-A.hmm|PF09356.10 evalue:1.1e-29 score:101.9 best_domain_score:101.1 name:Phage_BR0599;
tigrfam_acc TIGR02218;
tigrfam_desc phage conserved hypothetical protein BR0599;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name phg_TIGR02218;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02218 evalue:4.8e-89 score:297.7 best_domain_score:297.5 name:TIGR02218;
9455 8823 CDS
ID metaerg.pl|12881
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468598.1 1 210 evalue:5.0e-93 qcov:100.00 identity:77.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF09343;
pfam_desc Conserved hypothetical protein 2217 (DUF2460);
pfam_id DUF2460;
pfam_target db:Pfam-A.hmm|PF09343.10 evalue:6.9e-76 score:253.4 best_domain_score:253.3 name:DUF2460;
tigrfam_acc TIGR02217;
tigrfam_desc TIGR02217 family protein;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name chp_TIGR02217;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02217 evalue:5.3e-79 score:263.8 best_domain_score:263.6 name:TIGR02217;
10124 9471 CDS
ID metaerg.pl|12882
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797110.1 1 217 evalue:1.2e-92 qcov:100.00 identity:83.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
10326 10102 CDS
ID metaerg.pl|12883
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797109.1 1 72 evalue:1.6e-22 qcov:97.30 identity:79.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF09550;
pfam_desc Phage tail assembly chaperone protein, TAC;
pfam_id Phage_TAC_6;
pfam_target db:Pfam-A.hmm|PF09550.10 evalue:2.4e-23 score:81.5 best_domain_score:81.3 name:Phage_TAC_6;
tigrfam_acc TIGR02216;
tigrfam_desc phage conserved hypothetical protein;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name phage_TIGR02216;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02216 evalue:9.2e-18 score:63.4 best_domain_score:63.2 name:TIGR02216;
10637 10323 CDS
ID metaerg.pl|12884
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468601.1 1 104 evalue:5.4e-40 qcov:100.00 identity:81.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF11836;
pfam_desc Phage tail tube protein, GTA-gp10;
pfam_id Phage_TAC_11;
pfam_target db:Pfam-A.hmm|PF11836.8 evalue:6.2e-28 score:96.0 best_domain_score:95.8 name:Phage_TAC_11;
11059 10646 CDS
ID metaerg.pl|12885
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479061.1 1 135 evalue:1.9e-61 qcov:98.50 identity:88.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF06199;
pfam_desc Phage tail tube protein;
pfam_id Phage_tail_2;
pfam_target db:Pfam-A.hmm|PF06199.11 evalue:1.1e-42 score:144.6 best_domain_score:144.4 name:Phage_tail_2;
tigrfam_acc TIGR02126;
tigrfam_desc phage major tail protein, TP901-1 family;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name phgtail_TP901_1;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02126 evalue:1.7e-26 score:92.2 best_domain_score:92.1 name:TIGR02126;
11497 11084 CDS
ID metaerg.pl|12886
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797107.1 1 136 evalue:1.1e-53 qcov:99.30 identity:80.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF11367;
pfam_desc Protein of unknown function (DUF3168);
pfam_id DUF3168;
pfam_target db:Pfam-A.hmm|PF11367.8 evalue:5.4e-24 score:83.9 best_domain_score:83.7 name:DUF3168;
11835 11494 CDS
ID metaerg.pl|12887
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797106.1 1 113 evalue:6.5e-47 qcov:100.00 identity:83.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF05521;
pfam_desc Phage head-tail joining protein;
pfam_id Phage_H_T_join;
pfam_target db:Pfam-A.hmm|PF05521.11 evalue:3.6e-18 score:65.1 best_domain_score:65.0 name:Phage_H_T_join;
12410 11832 CDS
ID metaerg.pl|12888
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797105.1 1 192 evalue:7.6e-64 qcov:100.00 identity:68.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF05135;
pfam_desc Phage gp6-like head-tail connector protein;
pfam_id Phage_connect_1;
pfam_target db:Pfam-A.hmm|PF05135.13 evalue:5.5e-07 score:29.3 best_domain_score:16.3 name:Phage_connect_1;
tigrfam_acc TIGR02215;
tigrfam_desc phage conserved hypothetical protein, phiE125 gp8 family;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name phage_chp_gp8;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02215 evalue:9.4e-40 score:135.5 best_domain_score:135.4 name:TIGR02215;
13781 12576 CDS
ID metaerg.pl|12889
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386114.1 1 399 evalue:6.9e-184 qcov:99.50 identity:82.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF05065;
pfam_desc Phage capsid family;
pfam_id Phage_capsid;
pfam_target db:Pfam-A.hmm|PF05065.13 evalue:3.7e-86 score:288.1 best_domain_score:287.8 name:Phage_capsid;
tigrfam_acc TIGR01554;
tigrfam_desc phage major capsid protein, HK97 family;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name major_cap_HK97;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01554 evalue:2.8e-108 score:361.6 best_domain_score:361.3 name:TIGR01554;
14665 13877 CDS
ID metaerg.pl|12890
allec_ids 3.4.-.-;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF04586;
pfam_desc Caudovirus prohead serine protease;
pfam_id Peptidase_S78;
pfam_target db:Pfam-A.hmm|PF04586.17 evalue:3.3e-31 score:107.9 best_domain_score:107.3 name:Peptidase_S78;
tigrfam_acc TIGR01543;
tigrfam_desc phage prohead protease, HK97 family;
tigrfam_mainrole Protein fate;
tigrfam_name proheadase_HK97;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01543 evalue:5e-31 score:106.9 best_domain_score:106.3 name:TIGR01543;
tm_num 1;
14665 13877 transmembrane_helix
ID metaerg.pl|12891
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
topology i14048-14116o;
15891 14662 CDS
ID metaerg.pl|12892
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797102.1 1 409 evalue:1.9e-205 qcov:100.00 identity:87.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF04860;
pfam_desc Phage portal protein;
pfam_id Phage_portal;
pfam_target db:Pfam-A.hmm|PF04860.12 evalue:9.6e-85 score:283.8 best_domain_score:283.5 name:Phage_portal;
sprot_desc hypothetical protein;
sprot_id sp|Q1RIH4|Y759_RICBR;
sprot_target db:uniprot_sprot|sp|Q1RIH4|Y759_RICBR 69 408 evalue:7.6e-68 qcov:83.10 identity:38.70;
tigrfam_acc TIGR01537;
tigrfam_desc phage portal protein, HK97 family;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name portal_HK97;
tigrfam_sub1role Prophage functions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01537 evalue:3.7e-64 score:216.2 best_domain_score:215.9 name:TIGR01537;
17336 16038 CDS
ID metaerg.pl|12893
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657587.1 1 432 evalue:2.7e-218 qcov:100.00 identity:87.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF03237; PF17289;
pfam_desc Terminase-like family; Terminase RNaseH-like domain;
pfam_id Terminase_6; Terminase_6C;
pfam_target db:Pfam-A.hmm|PF03237.15 evalue:2.3e-24 score:85.5 best_domain_score:84.5 name:Terminase_6; db:Pfam-A.hmm|PF17289.2 evalue:4.9e-14 score:51.9 best_domain_score:51.2 name:Terminase_6C;
17652 17317 CDS
ID metaerg.pl|12894
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479054.1 1 110 evalue:3.4e-32 qcov:99.10 identity:69.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
19629 17797 CDS
ID metaerg.pl|12895
allgo_ids GO:0016021; GO:0055085; GO:0005886; GO:0008324; GO:0006813;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797072.1 1 610 evalue:3.1e-276 qcov:100.00 identity:85.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF03600; PF00939; PF02080;
pfam_desc Citrate transporter; Sodium:sulfate symporter transmembrane region; TrkA-C domain;
pfam_id CitMHS; Na_sulph_symp; TrkA_C;
pfam_target db:Pfam-A.hmm|PF03600.16 evalue:4.4e-39 score:133.7 best_domain_score:101.8 name:CitMHS; db:Pfam-A.hmm|PF00939.19 evalue:2.4e-13 score:49.2 best_domain_score:34.3 name:Na_sulph_symp; db:Pfam-A.hmm|PF02080.21 evalue:1.4e-23 score:81.7 best_domain_score:44.8 name:TrkA_C;
sprot_desc Uncharacterized transporter sll0640;
sprot_id sp|P72958|Y640_SYNY3;
sprot_target db:uniprot_sprot|sp|P72958|Y640_SYNY3 11 608 evalue:9.0e-73 qcov:98.00 identity:31.60;
tm_num 12;
19629 17797 transmembrane_helix
ID metaerg.pl|12896
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
topology o17806-17874i17893-17961o17989-18057i18118-18186o18229-18297i18334-18402o19054-19149i19207-19275o19285-19353i19372-19431o19444-19512i19549-19617o;
20570 19743 CDS
ID metaerg.pl|12897
allec_ids 3.1.4.16;
allgo_ids GO:0008663; GO:0004113; GO:0046872; GO:0050189;
allko_ids K09769;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797071.1 1 272 evalue:3.9e-138 qcov:98.90 identity:87.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF13277;
pfam_desc YmdB-like protein;
pfam_id YmdB;
pfam_target db:Pfam-A.hmm|PF13277.6 evalue:1.8e-95 score:318.3 best_domain_score:318.1 name:YmdB;
sprot_desc Phosphatase/phosphodiesterase DR_1281;
sprot_id sp|Q9RUV0|PPDE_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RUV0|PPDE_DEIRA 1 261 evalue:1.8e-52 qcov:94.90 identity:43.10;
20714 21538 CDS
ID metaerg.pl|12898
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
22165 21638 CDS
ID metaerg.pl|12899
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657585.1 13 175 evalue:7.7e-47 qcov:93.10 identity:68.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
sp YES;
21638 21694 lipoprotein_signal_peptide
ID metaerg.pl|12900
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
22249 23253 CDS
ID metaerg.pl|12901
allec_ids 4.1.99.22;
allgo_ids GO:0006777; GO:0019008; GO:0051539; GO:0061798; GO:0005525; GO:0046872; GO:1904047;
allko_ids K06941; K03639;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481393.1 1 334 evalue:2.1e-173 qcov:100.00 identity:89.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF13353; PF13394; PF06463; PF04055;
pfam_desc 4Fe-4S single cluster domain; 4Fe-4S single cluster domain; Molybdenum Cofactor Synthesis C; Radical SAM superfamily;
pfam_id Fer4_12; Fer4_14; Mob_synth_C; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF13353.6 evalue:3.6e-09 score:36.3 best_domain_score:35.5 name:Fer4_12; db:Pfam-A.hmm|PF13394.6 evalue:7e-07 score:28.6 best_domain_score:27.6 name:Fer4_14; db:Pfam-A.hmm|PF06463.13 evalue:1.4e-37 score:127.7 best_domain_score:127.2 name:Mob_synth_C; db:Pfam-A.hmm|PF04055.21 evalue:3e-27 score:95.2 best_domain_score:94.8 name:Radical_SAM;
sprot_desc GTP 3',8-cyclase;
sprot_id sp|A8LIR8|MOAA_DINSH;
sprot_target db:uniprot_sprot|sp|A8LIR8|MOAA_DINSH 2 334 evalue:7.9e-156 qcov:99.70 identity:80.20;
tigrfam_acc TIGR02666;
tigrfam_desc molybdenum cofactor biosynthesis protein A;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name moaA;
tigrfam_sub1role Molybdopterin;
tigrfam_target db:TIGRFAMs.hmm|TIGR02666 evalue:7.6e-109 score:362.9 best_domain_score:362.7 name:TIGR02666;
24653 23262 CDS
ID metaerg.pl|12902
allgo_ids GO:0043565; GO:0005737; GO:0005524; GO:0008134; GO:0009399; GO:0000160; GO:0006355;
allko_ids K07769; K02486; K13761; K11383; K12767; K11357; K10125; K04757; K07647; K07717; K07675; K07676; K10681; K06379; K07709; K07644; K02480; K02482; K07636; K07653; K11527; K07678; K10715; K03388; K02668; K10916; K08479; K07716; K02489; K01768; K07710; K07708; K07645; K07677; K08282; K01937; K07704; K11231; K02491; K11711; K07642; K00760; K02484; K11640; K11356; K07768; K11354; K07778; K07711; K07648; K02478; K07679; K07718; K07651; K07682; K07654; K07637; K03407; K07673; K01120; K08475; K07639; K07646; K07641; K07652; K07712;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797068.1 1 462 evalue:7.9e-240 qcov:99.80 identity:92.40;
kegg_pathway_id 05111; 00230; 00240; 00983; 00790; 02020; 04011; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; Drug metabolism - other enzymes; Folate biosynthesis; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF13191; PF02954; PF00072; PF00158; PF14532;
pfam_desc AAA ATPase domain; Bacterial regulatory protein, Fis family; Response regulator receiver domain; Sigma-54 interaction domain; Sigma-54 interaction domain;
pfam_id AAA_16; HTH_8; Response_reg; Sigma54_activat; Sigma54_activ_2;
pfam_target db:Pfam-A.hmm|PF13191.6 evalue:3e-08 score:33.5 best_domain_score:32.4 name:AAA_16; db:Pfam-A.hmm|PF02954.19 evalue:3.7e-14 score:51.4 best_domain_score:51.4 name:HTH_8; db:Pfam-A.hmm|PF00072.24 evalue:1.4e-28 score:98.5 best_domain_score:96.7 name:Response_reg; db:Pfam-A.hmm|PF00158.26 evalue:1.5e-20 score:72.8 best_domain_score:58.7 name:Sigma54_activat; db:Pfam-A.hmm|PF14532.6 evalue:6.1e-23 score:80.7 best_domain_score:79.6 name:Sigma54_activ_2;
sprot_desc DNA-binding transcriptional regulator NtrC;
sprot_id sp|P09432|NTRC_RHOCB;
sprot_target db:uniprot_sprot|sp|P09432|NTRC_RHOCB 1 462 evalue:4.4e-165 qcov:99.80 identity:64.90;
25746 24667 CDS
ID metaerg.pl|12903
allec_ids 2.7.13.3;
allgo_ids GO:0000155; GO:0007165; GO:0005737; GO:0005524; GO:0016787; GO:0009399;
allko_ids K01769; K07650; K10681; K07676; K06379; K13532; K07709; K07644; K02486; K11383; K12767; K14509; K11520; K07769; K04757; K11357; K11629; K10125; K07647; K13040; K10942; K07717; K07675; K02668; K03388; K08479; K10916; K07697; K02489; K07716; K07710; K07640; K01768; K07656; K08801; K02482; K02480; K07653; K07638; K07636; K13587; K02030; K11527; K07678; K10715; K11711; K07642; K02484; K11356; K11640; K07677; K07645; K07708; K10909; K07704; K08282; K07643; K11231; K02491; K07654; K07777; K00936; K07649; K03407; K07646; K13598; K07641; K07673; K08475; K07639; K07652; K07778; K11633; K07768; K07711; K11328; K13533; K07679; K07648; K07651; K07698; K07718;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481145.1 1 354 evalue:4.6e-171 qcov:98.60 identity:85.90;
kegg_pathway_id 05111; 00790; 00230; 04011; 02020; 03090;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Folate biosynthesis; Purine metabolism; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF02518; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:8.9e-18 score:64.1 best_domain_score:63.4 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:3.8e-11 score:42.1 best_domain_score:40.3 name:HisKA;
sprot_desc Sensory histidine kinase/phosphatase NtrB;
sprot_id sp|P09431|NTRB_RHOCB;
sprot_target db:uniprot_sprot|sp|P09431|NTRB_RHOCB 1 358 evalue:7.5e-120 qcov:99.70 identity:61.50;
26765 25743 CDS
ID metaerg.pl|12904
allec_ids 1.3.1.-;
allgo_ids GO:0008033; GO:0017150; GO:0050660; GO:0055114; GO:0000049;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797099.1 9 340 evalue:9.8e-147 qcov:97.60 identity:83.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
metacyc_pathway_id PWY-5063; PWY-5064; PWY-5863; PWY-6088; PWY1A0-6325; PWY-5393; HCAMHPDEG-PWY; PWY-3481; PWY-5466; PWY-5972; PWY-3461; PWY-5367; PWY-5729; PWY5F9-3233;
metacyc_pathway_name phytyl diphosphate biosynthesis;; chlorophyll a biosynthesis II;; superpathway of phylloquinol biosynthesis;; 3-chlorobenzoate degradation I (via chlorocatechol);; actinorhodin biosynthesis;; raspberry ketone biosynthesis;; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);; L-tyrosine biosynthesis II;; petroselinate biosynthesis;; vestitol and sativan biosynthesis;; phthalate degradation (aerobic);;
metacyc_pathway_type Phytyl-Diphosphate-Biosynthesis;; Chlorophyll-a-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; 3-Chlorobenzoate-Degradation;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN;; Phenolic-Compounds-Degradation;; Amino-Acid-Biosynthesis; Super-Pathways;; LIGNAN-SYN;; Stearate-Biosynthesis;; TYROSINE-SYN;; Unsaturated-Fatty-Acids-Biosynthesis;; ISOFLAVONOID-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;;
pfam_acc PF01207;
pfam_desc Dihydrouridine synthase (Dus);
pfam_id Dus;
pfam_target db:Pfam-A.hmm|PF01207.17 evalue:2.2e-100 score:335.0 best_domain_score:334.7 name:Dus;
sprot_desc Probable tRNA-dihydrouridine synthase;
sprot_id sp|Q08111|DUS_RHOCB;
sprot_target db:uniprot_sprot|sp|Q08111|DUS_RHOCB 13 331 evalue:1.1e-109 qcov:93.80 identity:68.70;
tigrfam_acc TIGR00737;
tigrfam_desc putative TIM-barrel protein, nifR3 family;
tigrfam_mainrole Unknown function;
tigrfam_name nifR3_yhdG;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00737 evalue:1.6e-107 score:358.6 best_domain_score:358.4 name:TIGR00737;
26953 28110 CDS
ID metaerg.pl|12905
allec_ids 2.7.7.60; 4.6.1.12;
allgo_ids GO:0070567; GO:0008685; GO:0050518; GO:0046872; GO:0019288; GO:0016114;
allko_ids K00677; K04042; K02536; K00674; K11528; K00966; K05822; K12506;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470724.1 2 377 evalue:7.9e-153 qcov:97.70 identity:74.30;
kegg_pathway_id 00540; 00300; 00530; 00051;
kegg_pathway_name Lipopolysaccharide biosynthesis; Lysine biosynthesis; Aminosugars metabolism; Fructose and mannose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
metacyc_pathway_id PWY-6270; NONMEVIPP-PWY; PWY-5121;
metacyc_pathway_name isoprene biosynthesis I;; methylerythritol phosphate pathway I;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);;
metacyc_pathway_type ISOPRENOIDS; Super-Pathways;; MEP-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;;
pfam_acc PF01128; PF12804; PF02542;
pfam_desc 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; MobA-like NTP transferase domain; YgbB family;
pfam_id IspD; NTP_transf_3; YgbB;
pfam_target db:Pfam-A.hmm|PF01128.19 evalue:9.7e-64 score:214.4 best_domain_score:213.9 name:IspD; db:Pfam-A.hmm|PF12804.7 evalue:1.3e-12 score:47.6 best_domain_score:47.6 name:NTP_transf_3; db:Pfam-A.hmm|PF02542.16 evalue:2.7e-58 score:195.9 best_domain_score:194.9 name:YgbB;
sprot_desc Bifunctional enzyme IspD/IspF;
sprot_id sp|Q08113|ISPDF_RHOCB;
sprot_target db:uniprot_sprot|sp|Q08113|ISPDF_RHOCB 4 378 evalue:6.0e-123 qcov:97.40 identity:62.60;
tigrfam_acc TIGR00151; TIGR00453;
tigrfam_desc 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ispF; ispD;
tigrfam_sub1role Other; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00151 evalue:2.3e-59 score:199.1 best_domain_score:198.4 name:TIGR00151; db:TIGRFAMs.hmm|TIGR00453 evalue:2.8e-57 score:192.8 best_domain_score:192.5 name:TIGR00453;
28107 28604 CDS
ID metaerg.pl|12906
allgo_ids GO:0006629; GO:0008962;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071482200.1 1 165 evalue:1.9e-79 qcov:100.00 identity:87.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF04608;
pfam_desc Phosphatidylglycerophosphatase A;
pfam_id PgpA;
pfam_target db:Pfam-A.hmm|PF04608.13 evalue:1.6e-46 score:157.1 best_domain_score:156.9 name:PgpA;
tm_num 3;
28107 28604 transmembrane_helix
ID metaerg.pl|12907
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
topology i28218-28286o28380-28448i28509-28577o;
28601 29074 CDS
ID metaerg.pl|12908
allec_ids 3.5.-.-;
allko_ids K03742;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797063.1 1 153 evalue:1.2e-51 qcov:97.50 identity:75.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF02464;
pfam_desc Competence-damaged protein;
pfam_id CinA;
pfam_target db:Pfam-A.hmm|PF02464.17 evalue:4.7e-52 score:174.9 best_domain_score:174.8 name:CinA;
sprot_desc CinA-like protein;
sprot_id sp|B3QTC8|CINAL_CHLT3;
sprot_target db:uniprot_sprot|sp|B3QTC8|CINAL_CHLT3 11 126 evalue:8.0e-26 qcov:73.90 identity:58.10;
tigrfam_acc TIGR00199;
tigrfam_desc amidohydrolase, PncC family;
tigrfam_mainrole DNA metabolism;
tigrfam_name PncC_domain;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00199 evalue:8.6e-41 score:138.7 best_domain_score:138.5 name:TIGR00199;
29623 29177 CDS
ID metaerg.pl|12909
allgo_ids GO:0005743; GO:0005739; GO:0048039; GO:0045333; GO:0006744;
allko_ids K05554; K18588;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470766.1 1 148 evalue:1.2e-72 qcov:100.00 identity:87.80;
kegg_pathway_id 01056;
kegg_pathway_name Biosynthesis of type II polyketide backbone;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF03364; PF10604;
pfam_desc Polyketide cyclase / dehydrase and lipid transport; Polyketide cyclase / dehydrase and lipid transport;
pfam_id Polyketide_cyc; Polyketide_cyc2;
pfam_target db:Pfam-A.hmm|PF03364.20 evalue:9.6e-26 score:89.8 best_domain_score:89.6 name:Polyketide_cyc; db:Pfam-A.hmm|PF10604.9 evalue:3.4e-10 score:39.6 best_domain_score:39.3 name:Polyketide_cyc2;
sprot_desc Coenzyme Q-binding protein COQ10 homolog, mitochondrial;
sprot_id sp|Q6PBN4|CQ10X_DANRE;
sprot_target db:uniprot_sprot|sp|Q6PBN4|CQ10X_DANRE 4 148 evalue:2.6e-18 qcov:98.00 identity:34.00;
29688 30224 CDS
ID metaerg.pl|12910
allec_ids 2.4.2.8;
allgo_ids GO:0009116; GO:0005737; GO:0052657; GO:0004422; GO:0046872; GO:0000166; GO:0032264; GO:0006166;
allko_ids K00760; K00762;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797061.1 1 178 evalue:5.8e-82 qcov:100.00 identity:88.80;
kegg_pathway_id 00240; 00230; 00983;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Drug metabolism - other enzymes;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
metacyc_pathway_id SALVPURINE2-PWY; PWY-6579; P1-PWY; SALVADEHYPOX-PWY; P121-PWY;
metacyc_pathway_name xanthine and xanthosine salvage;; superpathway of guanine and guanosine salvage;; ; adenosine nucleotides degradation II;; adenine and adenosine salvage I;;
metacyc_pathway_type Purine-Nucleotides-Salvage;; Guanine-Guanosine-Salvage; Super-Pathways;; ; Adenosine-Nucleotides-Degradation;; Adenine-Adenosine-Salvage;;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:2.2e-30 score:104.5 best_domain_score:104.3 name:Pribosyltran;
sprot_desc Hypoxanthine-guanine phosphoribosyltransferase;
sprot_id sp|P37171|HPRT_RHOCB;
sprot_target db:uniprot_sprot|sp|P37171|HPRT_RHOCB 1 178 evalue:1.6e-70 qcov:100.00 identity:74.20;
tigrfam_acc TIGR01203;
tigrfam_desc hypoxanthine phosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name HGPRTase;
tigrfam_sub1role Salvage of nucleosides and nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01203 evalue:3.6e-67 score:224.4 best_domain_score:224.2 name:TIGR01203;
30304 30762 CDS
ID metaerg.pl|12911
allgo_ids GO:0005506; GO:0009055; GO:0020037; GO:0042597;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084634945.1 1 152 evalue:1.7e-58 qcov:100.00 identity:71.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF01322;
pfam_desc Cytochrome C';
pfam_id Cytochrom_C_2;
pfam_target db:Pfam-A.hmm|PF01322.20 evalue:5.2e-32 score:110.5 best_domain_score:110.3 name:Cytochrom_C_2;
sp YES;
sprot_desc Cytochrome c';
sprot_id sp|P00138|CYCP_ALCXX;
sprot_target db:uniprot_sprot|sp|P00138|CYCP_ALCXX 21 148 evalue:1.9e-11 qcov:84.20 identity:35.70;
30304 30369 signal_peptide
ID metaerg.pl|12912
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
30834 31718 CDS
ID metaerg.pl|12913
allgo_ids GO:0009055; GO:0020037; GO:0005886; GO:0046872;
allko_ids K00428;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470769.1 1 294 evalue:3.2e-130 qcov:100.00 identity:74.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF13442; PF00034;
pfam_desc Cytochrome C oxidase, cbb3-type, subunit III ; Cytochrome c;
pfam_id Cytochrome_CBB3; Cytochrom_C;
pfam_target db:Pfam-A.hmm|PF13442.6 evalue:1.2e-11 score:43.9 best_domain_score:21.1 name:Cytochrome_CBB3; db:Pfam-A.hmm|PF00034.21 evalue:1.4e-15 score:57.5 best_domain_score:36.3 name:Cytochrom_C;
sp YES;
sprot_desc Diheme cytochrome c-type;
sprot_id sp|Q53143|CYCG_RHOS4;
sprot_target db:uniprot_sprot|sp|Q53143|CYCG_RHOS4 1 291 evalue:7.9e-83 qcov:99.00 identity:52.70;
tm_num 1;
30834 30929 signal_peptide
ID metaerg.pl|12914
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
30834 31718 transmembrane_helix
ID metaerg.pl|12915
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
topology i30846-30905o;
31809 32990 CDS
ID metaerg.pl|12916
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657584.1 4 393 evalue:2.0e-167 qcov:99.20 identity:88.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF01594;
pfam_desc AI-2E family transporter;
pfam_id AI-2E_transport;
pfam_target db:Pfam-A.hmm|PF01594.16 evalue:2.1e-36 score:124.9 best_domain_score:124.6 name:AI-2E_transport;
sprot_desc Putative transport protein HI_0338;
sprot_id sp|P44646|Y338_HAEIN;
sprot_target db:uniprot_sprot|sp|P44646|Y338_HAEIN 24 357 evalue:7.4e-12 qcov:85.00 identity:25.40;
tm_num 8;
31809 32990 transmembrane_helix
ID metaerg.pl|12917
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
topology i31878-31934o31944-32012i32049-32117o32289-32357i32448-32516o32544-32612i32646-32714o32742-32810i;
33573 32995 CDS
ID metaerg.pl|12918
allec_ids 6.3.3.2;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470771.1 1 189 evalue:2.7e-53 qcov:98.40 identity:57.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
metacyc_pathway_id PWY-2201; PWY-3841;
metacyc_pathway_name folate transformations I;; folate transformations II;;
metacyc_pathway_type Folate-Transformations;; Folate-Transformations;;
pfam_acc PF01812;
pfam_desc 5-formyltetrahydrofolate cyclo-ligase family;
pfam_id 5-FTHF_cyc-lig;
pfam_target db:Pfam-A.hmm|PF01812.20 evalue:3.7e-26 score:91.4 best_domain_score:91.2 name:5-FTHF_cyc-lig;
tigrfam_acc TIGR02727;
tigrfam_desc 5-formyltetrahydrofolate cyclo-ligase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name MTHFS_bact;
tigrfam_sub1role One-carbon metabolism;
tigrfam_target db:TIGRFAMs.hmm|TIGR02727 evalue:4.9e-37 score:126.7 best_domain_score:126.6 name:TIGR02727;
33842 33645 CDS
ID metaerg.pl|12919
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
tm_num 2;
33842 33645 transmembrane_helix
ID metaerg.pl|12920
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
topology i33663-33731o33741-33809i;
34568 33918 CDS
ID metaerg.pl|12921
allec_ids 2.7.4.8;
allgo_ids GO:0005737; GO:0005524; GO:0004385;
allko_ids K00942;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797055.1 1 214 evalue:3.8e-96 qcov:99.10 identity:83.60;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
metacyc_pathway_id DENOVOPURINE2-PWY; PRPP-PWY; P1-PWY; PWY-6125;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; ; superpathway of guanosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; ; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00625;
pfam_desc Guanylate kinase;
pfam_id Guanylate_kin;
pfam_target db:Pfam-A.hmm|PF00625.21 evalue:2.3e-47 score:160.3 best_domain_score:160.0 name:Guanylate_kin;
sprot_desc Guanylate kinase;
sprot_id sp|Q3J2A5|KGUA_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3J2A5|KGUA_RHOS4 1 209 evalue:1.2e-85 qcov:96.80 identity:74.20;
tigrfam_acc TIGR03263;
tigrfam_desc guanylate kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name guanyl_kin;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR03263 evalue:1.4e-68 score:229.2 best_domain_score:229.0 name:TIGR03263;
35475 34573 CDS
ID metaerg.pl|12922
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657590.1 4 300 evalue:6.5e-102 qcov:99.00 identity:66.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF08340; PF03755;
pfam_desc Domain of unknown function (DUF1732); YicC-like family, N-terminal region;
pfam_id DUF1732; YicC_N;
pfam_target db:Pfam-A.hmm|PF08340.11 evalue:1e-33 score:114.4 best_domain_score:113.2 name:DUF1732; db:Pfam-A.hmm|PF03755.13 evalue:1.4e-29 score:102.8 best_domain_score:101.2 name:YicC_N;
sprot_desc hypothetical protein;
sprot_id sp|P44726|Y467_HAEIN;
sprot_target db:uniprot_sprot|sp|P44726|Y467_HAEIN 1 300 evalue:7.6e-33 qcov:100.00 identity:35.40;
tigrfam_acc TIGR00255;
tigrfam_desc TIGR00255 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00255;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00255 evalue:1.1e-55 score:188.6 best_domain_score:188.4 name:TIGR00255;
35696 36268 CDS
ID metaerg.pl|12923
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797053.1 15 189 evalue:3.5e-61 qcov:92.10 identity:69.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF07310;
pfam_desc PAS domain;
pfam_id PAS_5;
pfam_target db:Pfam-A.hmm|PF07310.13 evalue:6.2e-28 score:96.5 best_domain_score:96.2 name:PAS_5;
36342 37067 CDS
ID metaerg.pl|12924
allec_ids 5.3.1.16;
allgo_ids GO:0008033; GO:0017150; GO:0050660; GO:0055114; GO:0005737; GO:0003949; GO:0000105;
allko_ids K01814;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797052.1 1 241 evalue:5.7e-117 qcov:100.00 identity:90.50;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
metacyc_pathway_id PRPP-PWY; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; HISTIDINE-SYN;;
pfam_acc PF01207; PF00977;
pfam_desc Dihydrouridine synthase (Dus); Histidine biosynthesis protein;
pfam_id Dus; His_biosynth;
pfam_target db:Pfam-A.hmm|PF01207.17 evalue:1.3e-08 score:33.5 best_domain_score:17.0 name:Dus; db:Pfam-A.hmm|PF00977.21 evalue:2.2e-82 score:275.2 best_domain_score:275.0 name:His_biosynth;
sprot_desc 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1;
sprot_id sp|Q5LU97|HIS41_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LU97|HIS41_RUEPO 1 239 evalue:1.7e-104 qcov:99.20 identity:81.60;
tigrfam_acc TIGR00007;
tigrfam_desc 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name TIGR00007;
tigrfam_sub1role Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00007 evalue:2e-81 score:272.1 best_domain_score:271.9 name:TIGR00007;
37740 37054 CDS
ID metaerg.pl|12925
allko_ids K01249;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797051.1 1 228 evalue:3.0e-107 qcov:100.00 identity:84.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF08713;
pfam_desc DNA alkylation repair enzyme;
pfam_id DNA_alkylation;
pfam_target db:Pfam-A.hmm|PF08713.11 evalue:1.4e-53 score:181.0 best_domain_score:180.8 name:DNA_alkylation;
39554 37737 CDS
ID metaerg.pl|12926
allec_ids 2.6.1.16;
allgo_ids GO:0097367; GO:1901135; GO:0005737; GO:0004360; GO:1901137; GO:0005975; GO:0006541;
allko_ids K00820;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797050.1 1 605 evalue:2.8e-298 qcov:100.00 identity:84.80;
kegg_pathway_id 00251; 00530;
kegg_pathway_name Glutamate metabolism; Aminosugars metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
metacyc_pathway_id PWY-6404; UDPNAGSYN-PWY; UDPNACETYLGALSYN-PWY; OANTIGEN-PWY;
metacyc_pathway_name superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; UDP-N-acetyl-D-glucosamine biosynthesis I;; UDP-N-acetyl-D-glucosamine biosynthesis II;; O-antigen building blocks biosynthesis (E. coli);;
metacyc_pathway_type Cell-Wall-Biosynthesis; Super-Pathways;; UDP-NAc-Glucosamine-Biosynthesis;; UDP-NAc-Glucosamine-Biosynthesis;; Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;;
pfam_acc PF13522; PF13537; PF01380;
pfam_desc Glutamine amidotransferase domain; Glutamine amidotransferase domain; SIS domain;
pfam_id GATase_6; GATase_7; SIS;
pfam_target db:Pfam-A.hmm|PF13522.6 evalue:4.1e-21 score:74.8 best_domain_score:73.9 name:GATase_6; db:Pfam-A.hmm|PF13537.6 evalue:3.6e-16 score:58.4 best_domain_score:57.4 name:GATase_7; db:Pfam-A.hmm|PF01380.22 evalue:5.1e-55 score:184.1 best_domain_score:92.4 name:SIS;
sprot_desc Glutamine--fructose-6-phosphate aminotransferase [isomerizing];
sprot_id sp|Q8CY30|GLMS_BRUSU;
sprot_target db:uniprot_sprot|sp|Q8CY30|GLMS_BRUSU 1 605 evalue:6.6e-201 qcov:100.00 identity:58.50;
tigrfam_acc TIGR01135;
tigrfam_desc glutamine-fructose-6-phosphate transaminase (isomerizing);
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name glmS;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR01135 evalue:2.6e-231 score:768.5 best_domain_score:768.3 name:TIGR01135;
40908 39559 CDS
ID metaerg.pl|12927
allec_ids 2.7.7.23; 2.3.1.157; 2.7.7.23 2.3.1.157;
allgo_ids GO:0070567; GO:0005737; GO:0019134; GO:0000287; GO:0003977; GO:0000902; GO:0071555; GO:0009245; GO:0009103; GO:0009252; GO:0008360; GO:0006048;
allko_ids K00966; K11528; K05822; K00972; K00677; K00640; K00674; K04042; K02536;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797049.1 1 449 evalue:2.5e-214 qcov:100.00 identity:85.10;
kegg_pathway_id 00920; 00051; 00540; 00530; 00300; 00272;
kegg_pathway_name Sulfur metabolism; Fructose and mannose metabolism; Lipopolysaccharide biosynthesis; Aminosugars metabolism; Lysine biosynthesis; Cysteine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
metacyc_pathway_id OANTIGEN-PWY; PWY-6404; UDPNAGSYN-PWY; UDPNACETYLGALSYN-PWY;
metacyc_pathway_name O-antigen building blocks biosynthesis (E. coli);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; UDP-N-acetyl-D-glucosamine biosynthesis I;; UDP-N-acetyl-D-glucosamine biosynthesis II;;
metacyc_pathway_type Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; UDP-NAc-Glucosamine-Biosynthesis;; UDP-NAc-Glucosamine-Biosynthesis;;
pfam_acc PF00132; PF01128; PF00483; PF12804;
pfam_desc Bacterial transferase hexapeptide (six repeats); 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Nucleotidyl transferase; MobA-like NTP transferase domain;
pfam_id Hexapep; IspD; NTP_transferase; NTP_transf_3;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:2.7e-23 score:80.0 best_domain_score:26.4 name:Hexapep; db:Pfam-A.hmm|PF01128.19 evalue:8.5e-08 score:31.4 best_domain_score:30.2 name:IspD; db:Pfam-A.hmm|PF00483.23 evalue:1e-10 score:40.8 best_domain_score:40.3 name:NTP_transferase; db:Pfam-A.hmm|PF12804.7 evalue:9.1e-20 score:70.8 best_domain_score:70.8 name:NTP_transf_3;
sprot_desc Bifunctional protein GlmU;
sprot_id sp|Q28MG0|GLMU_JANSC;
sprot_target db:uniprot_sprot|sp|Q28MG0|GLMU_JANSC 3 448 evalue:1.7e-124 qcov:99.30 identity:59.20;
tigrfam_acc TIGR01173;
tigrfam_desc UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name glmU;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR01173 evalue:1.6e-148 score:494.5 best_domain_score:490.5 name:TIGR01173;
41093 41506 CDS
ID metaerg.pl|12928
allko_ids K14061;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797048.1 1 137 evalue:1.2e-50 qcov:100.00 identity:80.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:4.4e-24 score:84.8 best_domain_score:84.7 name:Usp;
sprot_desc Universal stress protein F;
sprot_id sp|P67092|USPF_SALTI;
sprot_target db:uniprot_sprot|sp|P67092|USPF_SALTI 1 137 evalue:8.3e-11 qcov:100.00 identity:34.00;
41533 41949 CDS
ID metaerg.pl|12929
allko_ids K14061;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797047.1 1 138 evalue:8.8e-54 qcov:100.00 identity:83.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:2.7e-24 score:85.5 best_domain_score:85.3 name:Usp;
sprot_desc Universal stress protein F;
sprot_id sp|P0A4P7|USPF_ECO57;
sprot_target db:uniprot_sprot|sp|P0A4P7|USPF_ECO57 35 138 evalue:1.0e-08 qcov:75.40 identity:38.20;
42058 42474 CDS
ID metaerg.pl|12930
allgo_ids GO:0005524; GO:0007155; GO:0006979;
allko_ids K14061;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470780.1 1 138 evalue:3.8e-57 qcov:100.00 identity:84.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.3e-24 score:86.6 best_domain_score:86.4 name:Usp;
sprot_desc Universal stress protein F;
sprot_id sp|P37903|USPF_ECOLI;
sprot_target db:uniprot_sprot|sp|P37903|USPF_ECOLI 1 138 evalue:6.4e-11 qcov:100.00 identity:31.20;
42564 44597 CDS
ID metaerg.pl|12931
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797045.1 1 677 evalue:0.0e+00 qcov:100.00 identity:88.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF14574; PF17650; PF17651;
pfam_desc C-terminal domain of RACo the ASKHA domain; RACo linker region; RACo middle region;
pfam_id RACo_C_ter; RACo_linker; Raco_middle;
pfam_target db:Pfam-A.hmm|PF14574.6 evalue:4.9e-83 score:277.4 best_domain_score:276.9 name:RACo_C_ter; db:Pfam-A.hmm|PF17650.1 evalue:3.9e-32 score:109.2 best_domain_score:108.3 name:RACo_linker; db:Pfam-A.hmm|PF17651.1 evalue:1.4e-47 score:160.6 best_domain_score:159.7 name:Raco_middle;
45285 44665 CDS
ID metaerg.pl|12932
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481213.1 1 206 evalue:5.7e-57 qcov:100.00 identity:63.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
sp YES;
tm_num 1;
44665 44745 signal_peptide
ID metaerg.pl|12933
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
45285 44665 transmembrane_helix
ID metaerg.pl|12934
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
topology i44677-44730o;
45612 46016 CDS
ID metaerg.pl|12935
allgo_ids GO:0006413; GO:0005737; GO:0003743;
allko_ids K02520;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797043.1 1 134 evalue:1.3e-65 qcov:100.00 identity:95.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF00707; PF05198;
pfam_desc Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain;
pfam_id IF3_C; IF3_N;
pfam_target db:Pfam-A.hmm|PF00707.22 evalue:1.3e-40 score:136.5 best_domain_score:136.1 name:IF3_C; db:Pfam-A.hmm|PF05198.16 evalue:1.9e-18 score:65.7 best_domain_score:64.8 name:IF3_N;
sprot_desc Translation initiation factor IF-3;
sprot_id sp|Q5LQ58|IF3_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LQ58|IF3_RUEPO 1 133 evalue:1.1e-60 qcov:99.30 identity:85.00;
tigrfam_acc TIGR00168;
tigrfam_desc translation initiation factor IF-3;
tigrfam_mainrole Protein synthesis;
tigrfam_name infC;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00168 evalue:1.4e-59 score:199.6 best_domain_score:199.4 name:TIGR00168;
47491 46169 CDS
ID metaerg.pl|12936
allec_ids 2.6.-.-;
allgo_ids GO:0008483; GO:0030170; GO:0005829;
allko_ids K00818; K05830; K00821;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481215.1 1 439 evalue:5.9e-221 qcov:99.80 identity:86.80;
kegg_pathway_id 00300; 00220;
kegg_pathway_name Lysine biosynthesis; Urea cycle and metabolism of amino groups;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:8.4e-105 score:349.9 best_domain_score:349.7 name:Aminotran_3;
sprot_desc Uncharacterized aminotransferase C1771.03c;
sprot_id sp|O94562|YGD3_SCHPO;
sprot_target db:uniprot_sprot|sp|O94562|YGD3_SCHPO 10 440 evalue:5.8e-106 qcov:98.00 identity:45.10;
47876 47577 CDS
ID metaerg.pl|12937
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797042.1 4 99 evalue:1.9e-26 qcov:97.00 identity:65.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
sp YES;
47577 47639 signal_peptide
ID metaerg.pl|12938
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
48071 48937 CDS
ID metaerg.pl|12939
allec_ids 3.1.2.30;
allgo_ids GO:0003824; GO:0016787; GO:0046872;
allko_ids K14451;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481217.1 1 288 evalue:5.2e-133 qcov:100.00 identity:85.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF15617; PF03328; PF02896;
pfam_desc C-C_Bond_Lyase of the TIM-Barrel fold; HpcH/HpaI aldolase/citrate lyase family; PEP-utilising enzyme, TIM barrel domain;
pfam_id C-C_Bond_Lyase; HpcH_HpaI; PEP-utilizers_C;
pfam_target db:Pfam-A.hmm|PF15617.6 evalue:1.1e-10 score:40.5 best_domain_score:23.0 name:C-C_Bond_Lyase; db:Pfam-A.hmm|PF03328.14 evalue:1.4e-54 score:183.8 best_domain_score:183.8 name:HpcH_HpaI; db:Pfam-A.hmm|PF02896.18 evalue:1.6e-06 score:26.7 best_domain_score:25.4 name:PEP-utilizers_C;
sprot_desc (3S)-malyl-CoA thioesterase;
sprot_id sp|A3PN16|MCTE_RHOS1;
sprot_target db:uniprot_sprot|sp|A3PN16|MCTE_RHOS1 5 284 evalue:4.8e-93 qcov:97.20 identity:63.20;
48942 49499 CDS
ID metaerg.pl|12940
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797040.1 1 185 evalue:9.5e-88 qcov:100.00 identity:84.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF07298;
pfam_desc NnrU protein;
pfam_id NnrU;
pfam_target db:Pfam-A.hmm|PF07298.11 evalue:2.8e-38 score:130.8 best_domain_score:130.6 name:NnrU;
tm_num 5;
48942 49499 transmembrane_helix
ID metaerg.pl|12941
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
topology i48945-48998o49041-49100i49119-49187o49284-49352i49413-49481o;
49499 49702 CDS
ID metaerg.pl|12942
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072245722.1 1 67 evalue:1.1e-25 qcov:100.00 identity:88.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF08410;
pfam_desc Domain of unknown function (DUF1737);
pfam_id DUF1737;
pfam_target db:Pfam-A.hmm|PF08410.10 evalue:1.5e-28 score:97.7 best_domain_score:97.5 name:DUF1737;
49782 50810 CDS
ID metaerg.pl|12943
allec_ids 4.2.1.148;
allgo_ids GO:0016833; GO:0045733;
allko_ids K14449;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470790.1 1 342 evalue:9.4e-174 qcov:100.00 identity:88.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF01575; PF13452;
pfam_desc MaoC like domain; N-terminal half of MaoC dehydratase;
pfam_id MaoC_dehydratas; MaoC_dehydrat_N;
pfam_target db:Pfam-A.hmm|PF01575.19 evalue:4.2e-09 score:35.2 best_domain_score:25.0 name:MaoC_dehydratas; db:Pfam-A.hmm|PF13452.6 evalue:1.3e-06 score:27.8 best_domain_score:25.5 name:MaoC_dehydrat_N;
sprot_desc Mesaconyl-CoA hydratase;
sprot_id sp|Q3IZ78|MCH_RHOS4;
sprot_target db:uniprot_sprot|sp|Q3IZ78|MCH_RHOS4 3 341 evalue:4.3e-157 qcov:99.10 identity:78.90;
51049 51432 CDS
ID metaerg.pl|12944
allgo_ids GO:0016627; GO:0016021; GO:0005886; GO:0045281; GO:0009055; GO:0046872; GO:0000104; GO:0006099;
allko_ids K00241;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481220.1 1 127 evalue:2.7e-57 qcov:100.00 identity:91.30;
kegg_pathway_id 00720; 00632; 00190; 00020; 00650;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Benzoate degradation via CoA ligation; Oxidative phosphorylation; Citrate cycle (TCA cycle); Butanoate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF01127;
pfam_desc Succinate dehydrogenase/Fumarate reductase transmembrane subunit;
pfam_id Sdh_cyt;
pfam_target db:Pfam-A.hmm|PF01127.22 evalue:2e-27 score:94.9 best_domain_score:94.7 name:Sdh_cyt;
sprot_desc Succinate dehydrogenase cytochrome b556 subunit;
sprot_id sp|Q59659|DHSC_PARDE;
sprot_target db:uniprot_sprot|sp|Q59659|DHSC_PARDE 1 126 evalue:1.1e-30 qcov:99.20 identity:54.00;
tigrfam_acc TIGR02970;
tigrfam_desc succinate dehydrogenase, cytochrome b556 subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name succ_dehyd_cytB;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR02970 evalue:4e-35 score:119.8 best_domain_score:119.6 name:TIGR02970;
tm_num 3;
51049 51432 transmembrane_helix
ID metaerg.pl|12945
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
topology i51130-51198o51241-51309i51370-51426o;
51445 51825 CDS
ID metaerg.pl|12946
allgo_ids GO:0016627;
allko_ids K00242;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481221.1 1 126 evalue:4.9e-59 qcov:100.00 identity:90.50;
kegg_pathway_id 00720; 00632; 00190; 00020; 00650;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Benzoate degradation via CoA ligation; Oxidative phosphorylation; Citrate cycle (TCA cycle); Butanoate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
pfam_acc PF05328; PF01127;
pfam_desc CybS, succinate dehydrogenase cytochrome B small subunit; Succinate dehydrogenase/Fumarate reductase transmembrane subunit;
pfam_id CybS; Sdh_cyt;
pfam_target db:Pfam-A.hmm|PF05328.12 evalue:1.4e-09 score:36.9 best_domain_score:35.4 name:CybS; db:Pfam-A.hmm|PF01127.22 evalue:1.2e-12 score:47.1 best_domain_score:46.8 name:Sdh_cyt;
tigrfam_acc TIGR02968;
tigrfam_desc succinate dehydrogenase, hydrophobic membrane anchor protein;
tigrfam_mainrole Energy metabolism;
tigrfam_name succ_dehyd_anc;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR02968 evalue:1.5e-21 score:75.7 best_domain_score:75.4 name:TIGR02968;
tm_num 3;
51445 51825 transmembrane_helix
ID metaerg.pl|12947
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
topology i51526-51594o51637-51705i51742-51810o;
51835 53640 CDS
ID metaerg.pl|12948
allec_ids 1.3.5.1;
allgo_ids GO:0016491; GO:0055114; GO:0005886; GO:0050660; GO:0008177; GO:0022900; GO:0006099;
allko_ids K00234; K00244; K00239; K00278; K00394;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481222.1 1 601 evalue:0.0e+00 qcov:100.00 identity:92.80;
kegg_pathway_id 00920; 00720; 00632; 00020; 02020; 00450; 00760; 00252; 00650; 05012; 00190;
kegg_pathway_name Sulfur metabolism; Reductive carboxylate cycle (CO2 fixation); Benzoate degradation via CoA ligation; Citrate cycle (TCA cycle); Two-component system - General; Selenoamino acid metabolism; Nicotinate and nicotinamide metabolism; Alanine and aspartate metabolism; Butanoate metabolism; Parkinson's disease; Oxidative phosphorylation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
metacyc_pathway_id PWY-5464; PWY0-1353; PWY-4302; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-5913; TCA; PWY-561; TCA-GLYOX-BYPASS; PWY-5690; PWY-3781; PWY0-1329;
metacyc_pathway_name superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; succinate to cytochrome bd oxidase electron transfer;; aerobic respiration III (alternative oxidase pathway);; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; partial TCA cycle (obligate autotrophs);; TCA cycle I (prokaryotic);; superpathway of glyoxylate cycle and fatty acid degradation;; superpathway of glyoxylate bypass and TCA;; TCA cycle II (plants and fungi);; aerobic respiration I (cytochrome c);; succinate to cytochrome bo oxidase electron transfer;;
metacyc_pathway_type Energy-Metabolism; Super-Pathways;; AEROBIC-RESPIRATION; Electron-Transfer;; AEROBIC-RESPIRATION; Electron-Transfer;; Energy-Metabolism; Super-Pathways;; TCA-VARIANTS;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Super-Pathways; TCA-VARIANTS;; TCA-VARIANTS;; AEROBIC-RESPIRATION; Electron-Transfer;; AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00890; PF02910;
pfam_desc FAD binding domain; Fumarate reductase flavoprotein C-term;
pfam_id FAD_binding_2; Succ_DH_flav_C;
pfam_target db:Pfam-A.hmm|PF00890.24 evalue:4.3e-125 score:417.3 best_domain_score:416.9 name:FAD_binding_2; db:Pfam-A.hmm|PF02910.20 evalue:1.2e-41 score:140.9 best_domain_score:140.3 name:Succ_DH_flav_C;
sprot_desc Succinate dehydrogenase flavoprotein subunit;
sprot_id sp|Q59661|SDHA_PARDE;
sprot_target db:uniprot_sprot|sp|Q59661|SDHA_PARDE 1 601 evalue:1.5e-306 qcov:100.00 identity:84.40;
tigrfam_acc TIGR01812; TIGR01816;
tigrfam_desc succinate dehydrogenase or fumarate reductase, flavoprotein subunit; succinate dehydrogenase, flavoprotein subunit;
tigrfam_mainrole Energy metabolism; Energy metabolism;
tigrfam_name sdhA_frdA_Gneg; sdhA_forward;
tigrfam_sub1role TCA cycle; TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR01812 evalue:3e-235 score:781.2 best_domain_score:781.0 name:TIGR01812; db:TIGRFAMs.hmm|TIGR01816 evalue:3.7e-285 score:945.8 best_domain_score:945.6 name:TIGR01816;
53637 53954 CDS
ID metaerg.pl|12949
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657583.1 1 105 evalue:1.4e-38 qcov:100.00 identity:87.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
sp YES;
53637 53684 lipoprotein_signal_peptide
ID metaerg.pl|12950
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
53967 54557 CDS
ID metaerg.pl|12951
allec_ids 1.3.5.1;
allgo_ids GO:0009055; GO:0051536; GO:0051537; GO:0051538; GO:0051539; GO:0046872; GO:0008177; GO:0006099;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481223.1 1 197 evalue:7.0e-113 qcov:100.00 identity:94.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 215.329; 0.115057; 0.657514; 216.753; 0.651669;
metacyc_pathway_id TCA; PWY-561; PWY-5913; PWY-5464; GLYCOLYSIS-TCA-GLYOX-BYPASS; PWY-4302; PWY0-1353; PWY-5690; PWY-3781; PWY0-1329; TCA-GLYOX-BYPASS;
metacyc_pathway_name TCA cycle I (prokaryotic);; superpathway of glyoxylate cycle and fatty acid degradation;; partial TCA cycle (obligate autotrophs);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; aerobic respiration III (alternative oxidase pathway);; succinate to cytochrome bd oxidase electron transfer;; TCA cycle II (plants and fungi);; aerobic respiration I (cytochrome c);; succinate to cytochrome bo oxidase electron transfer;; superpathway of glyoxylate bypass and TCA;;
metacyc_pathway_type TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; AEROBIC-RESPIRATION; Electron-Transfer;; AEROBIC-RESPIRATION; Electron-Transfer;; TCA-VARIANTS;; AEROBIC-RESPIRATION; Electron-Transfer;; AEROBIC-RESPIRATION; Electron-Transfer;; Super-Pathways; TCA-VARIANTS;;
pfam_acc PF13085;
pfam_desc 2Fe-2S iron-sulfur cluster binding domain;
pfam_id Fer2_3;
pfam_target db:Pfam-A.hmm|PF13085.6 evalue:5.8e-31 score:106.0 best_domain_score:105.3 name:Fer2_3;
sprot_desc Succinate dehydrogenase iron-sulfur subunit;
sprot_id sp|Q59662|SDHB_PARDE;
sprot_target db:uniprot_sprot|sp|Q59662|SDHB_PARDE 1 197 evalue:7.8e-103 qcov:100.00 identity:84.30;
tigrfam_acc TIGR00384;
tigrfam_desc succinate dehydrogenase and fumarate reductase iron-sulfur protein;
tigrfam_mainrole Energy metabolism;
tigrfam_name dhsB;
tigrfam_sub1role TCA cycle;
tigrfam_target db:TIGRFAMs.hmm|TIGR00384 evalue:8.8e-58 score:194.5 best_domain_score:194.3 name:TIGR00384;
>Feature NODE_298_length_53607_cov_46.7431
304 1 bac_16SrRNA
ID metaerg.pl|12952
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|CP007203.3724518.3725999 1 300 evalue:9.96e-155 qcov:99 identity:99.667;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Nostocales;Nostocaceae;Nodularia PCC-9350;
3 188 CDS
ID metaerg.pl|12953
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Synechococcales;f__Cyanobiaceae;g__Prochlorococcus_A;s__Prochlorococcus_A sp000634115;
genomedb_acc GCA_000634115.1;
genomedb_target db:genomedb|GCA_000634115.1|JFLJ01000088.1_1 6 61 evalue:2.8e-12 qcov:91.80 identity:73.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
650 1825 CDS
ID metaerg.pl|12954
allgo_ids GO:0016491; GO:0055114;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006199158.1 1 391 evalue:4.6e-201 qcov:100.00 identity:90.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF01266; PF00890; PF13450;
pfam_desc FAD dependent oxidoreductase; FAD binding domain; NAD(P)-binding Rossmann-like domain;
pfam_id DAO; FAD_binding_2; NAD_binding_8;
pfam_target db:Pfam-A.hmm|PF01266.24 evalue:3.6e-39 score:134.5 best_domain_score:134.2 name:DAO; db:Pfam-A.hmm|PF00890.24 evalue:2.6e-07 score:29.3 best_domain_score:24.9 name:FAD_binding_2; db:Pfam-A.hmm|PF13450.6 evalue:2.2e-07 score:30.3 best_domain_score:28.9 name:NAD_binding_8;
2615 1896 CDS
ID metaerg.pl|12955
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__NIES-4103;s__NIES-4103 sp002368335;
genomedb_acc GCF_002368335.1;
genomedb_target db:genomedb|GCF_002368335.1|WP_096556997.1 1 238 evalue:2.6e-61 qcov:99.60 identity:59.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
tm_num 2;
2615 1896 transmembrane_helix
ID metaerg.pl|12956
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
topology o2232-2300i2313-2381o;
3940 2624 CDS
ID metaerg.pl|12957
allec_ids 1.14.-.-;
allgo_ids GO:0005506; GO:0016705; GO:0020037; GO:0055114; GO:0004497; GO:0016125;
allko_ids K00517;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092776.1 1 438 evalue:1.0e-233 qcov:100.00 identity:90.20;
kegg_pathway_id 00903; 00626; 00940; 00361;
kegg_pathway_name Limonene and pinene degradation; Naphthalene and anthracene degradation; Phenylpropanoid biosynthesis; gamma-Hexachlorocyclohexane degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
metacyc_pathway_id FLUORENE-DEG-9-ONE-PWY; PWY-6494; P481-PWY; PWY-5479; PWY-6544; PWY-2961; PWY-1381; PWY-699; PWY-6442; PWY-2582;
metacyc_pathway_name fluorene degradation I;; gibberellin inactivation III (epoxidation);; adamantanone degradation;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of C28 brassinosteroid biosynthesis;; sesquiterpenoid phytoalexins biosynthesis;; fluorene degradation II;; brassinosteroid biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; brassinosteroid biosynthesis II;;
metacyc_pathway_type Fluorene-Degradation;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; Other-Degradation;; LIGNAN-SYN;; Super-Pathways;; SESQUITERPENOID-SYN; TERPENOID-PHYTOALEXINS;; Fluorene-Degradation;; Brassinosteroid-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Brassinosteroid-Biosynthesis;;
pfam_acc PF00067;
pfam_desc Cytochrome P450;
pfam_id p450;
pfam_target db:Pfam-A.hmm|PF00067.22 evalue:3.2e-89 score:299.0 best_domain_score:298.7 name:p450;
sprot_desc Putative cytochrome P450 120;
sprot_id sp|Q59990|CP120_SYNY3;
sprot_target db:uniprot_sprot|sp|Q59990|CP120_SYNY3 7 438 evalue:3.9e-86 qcov:98.60 identity:40.20;
5709 4018 CDS
ID metaerg.pl|12958
allec_ids 4.2.1.9;
allgo_ids GO:0003824; GO:0051539; GO:0004160; GO:0046872; GO:0009097; GO:0009099;
allko_ids K01687;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_042202732.1 1 562 evalue:0.0e+00 qcov:99.80 identity:98.90;
kegg_pathway_id 00290; 00770;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
metacyc_pathway_id ILEUSYN-PWY; PWY-5103; PWY-5104; BRANCHED-CHAIN-AA-SYN-PWY; PWY-3001; THREOCAT-PWY; VALSYN-PWY; PWY-5101;
metacyc_pathway_name L-isoleucine biosynthesis I (from threonine);; L-isoleucine biosynthesis III;; L-isoleucine biosynthesis IV;; superpathway of branched chain amino acid biosynthesis;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-threonine metabolism;; L-valine biosynthesis;; L-isoleucine biosynthesis II;;
metacyc_pathway_type ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; Super-Pathways; THREONINE-DEG;; VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;;
pfam_acc PF00920;
pfam_desc Dehydratase family;
pfam_id ILVD_EDD;
pfam_target db:Pfam-A.hmm|PF00920.21 evalue:6.5e-211 score:700.6 best_domain_score:700.5 name:ILVD_EDD;
sprot_desc Dihydroxy-acid dehydratase;
sprot_id sp|B2J456|ILVD_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J456|ILVD_NOSP7 1 561 evalue:9.8e-292 qcov:99.60 identity:91.30;
tigrfam_acc TIGR00110;
tigrfam_desc dihydroxy-acid dehydratase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ilvD;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00110 evalue:3.6e-244 score:810.5 best_domain_score:810.3 name:TIGR00110;
6455 5802 CDS
ID metaerg.pl|12959
allec_ids 3.5.99.2;
allgo_ids GO:0050334; GO:0009228; GO:0009229;
allko_ids K03707;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092734.1 12 217 evalue:1.3e-107 qcov:94.90 identity:92.70;
kegg_pathway_id 00730;
kegg_pathway_name Thiamine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF03070;
pfam_desc TENA/THI-4/PQQC family;
pfam_id TENA_THI-4;
pfam_target db:Pfam-A.hmm|PF03070.16 evalue:3.4e-32 score:111.2 best_domain_score:111.0 name:TENA_THI-4;
sprot_desc Aminopyrimidine aminohydrolase;
sprot_id sp|Q9K9G8|TENA_BACHD;
sprot_target db:uniprot_sprot|sp|Q9K9G8|TENA_BACHD 12 190 evalue:1.2e-19 qcov:82.50 identity:32.10;
7330 6560 CDS
ID metaerg.pl|12960
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006198024.1 1 256 evalue:4.5e-128 qcov:100.00 identity:95.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF00805; PF13576; PF13599;
pfam_desc Pentapeptide repeats (8 copies); Pentapeptide repeats (9 copies); Pentapeptide repeats (9 copies);
pfam_id Pentapeptide; Pentapeptide_3; Pentapeptide_4;
pfam_target db:Pfam-A.hmm|PF00805.22 evalue:4.7e-28 score:95.7 best_domain_score:49.2 name:Pentapeptide; db:Pfam-A.hmm|PF13576.6 evalue:6.3e-12 score:44.7 best_domain_score:21.2 name:Pentapeptide_3; db:Pfam-A.hmm|PF13599.6 evalue:1.1e-11 score:44.0 best_domain_score:32.9 name:Pentapeptide_4;
sp YES;
6560 6628 signal_peptide
ID metaerg.pl|12961
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
9221 7596 CDS
ID metaerg.pl|12962
allgo_ids GO:0006812; GO:0015299; GO:0016021; GO:0055085; GO:0005886; GO:0097228; GO:0030317; GO:0051453; GO:0007338; GO:0006814;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092732.1 1 540 evalue:1.0e-270 qcov:99.80 identity:93.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF00999; PF00582;
pfam_desc Sodium/hydrogen exchanger family; Universal stress protein family;
pfam_id Na_H_Exchanger; Usp;
pfam_target db:Pfam-A.hmm|PF00999.21 evalue:2e-33 score:115.0 best_domain_score:114.5 name:Na_H_Exchanger; db:Pfam-A.hmm|PF00582.26 evalue:4.5e-20 score:71.8 best_domain_score:65.3 name:Usp;
sprot_desc Sodium/hydrogen exchanger 9B1;
sprot_id sp|Q8C0X2|SL9B1_MOUSE;
sprot_target db:uniprot_sprot|sp|Q8C0X2|SL9B1_MOUSE 25 415 evalue:6.2e-25 qcov:72.30 identity:35.50;
tm_num 10;
9221 7596 transmembrane_helix
ID metaerg.pl|12963
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
topology i7656-7724o7767-7811i7848-7916o7926-7985i8046-8114o8193-8261i8298-8366o8448-8516i8520-8588o8700-8768i;
10006 9404 CDS
ID metaerg.pl|12964
allgo_ids GO:0006812; GO:0008324; GO:0016021; GO:0055085;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena;s__Pseudanabaena cyanobacterium;
genomedb_acc GCA_001873375.1;
genomedb_target db:genomedb|GCA_001873375.1|OIP68464.1 1 193 evalue:8.5e-50 qcov:96.50 identity:54.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF01545;
pfam_desc Cation efflux family;
pfam_id Cation_efflux;
pfam_target db:Pfam-A.hmm|PF01545.21 evalue:1.9e-18 score:66.1 best_domain_score:47.6 name:Cation_efflux;
tm_num 5;
10006 9404 transmembrane_helix
ID metaerg.pl|12965
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
topology i9434-9502o9512-9580i9617-9670o9713-9775i9836-9904o;
11359 12255 CDS
ID metaerg.pl|12966
allec_ids 1.18.6.1;
allgo_ids GO:0005524; GO:0016491; GO:0055114; GO:0016612; GO:0051539; GO:0018697; GO:0046872; GO:0016163; GO:0009399;
allko_ids K02588; K11333;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195291.1 1 298 evalue:1.6e-161 qcov:100.00 identity:98.30;
kegg_pathway_id 00910; 00625;
kegg_pathway_name Nitrogen metabolism; Tetrachloroethene degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
metabolic_acc TIGR01287;
metabolic_process compound:Nitrogen;process:N2 fixation;gene:nifH;;
metabolic_target db:metabolic.hmm|TIGR01287 evalue:1.8e-141 score:469.4 best_domain_score:469.2 name:TIGR01287;
metacyc_pathway_id N2FIX-PWY;
metacyc_pathway_name nitrogen fixation I (ferredoxin);;
metacyc_pathway_type Nitrogen-Fixation;;
pfam_acc PF13614; PF02374; PF01656; PF00142;
pfam_desc AAA domain; Anion-transporting ATPase; CobQ/CobB/MinD/ParA nucleotide binding domain; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family;
pfam_id AAA_31; ArsA_ATPase; CbiA; Fer4_NifH;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:2.7e-10 score:39.7 best_domain_score:37.2 name:AAA_31; db:Pfam-A.hmm|PF02374.15 evalue:1.7e-07 score:30.0 best_domain_score:28.8 name:ArsA_ATPase; db:Pfam-A.hmm|PF01656.23 evalue:4.7e-10 score:38.8 best_domain_score:38.1 name:CbiA; db:Pfam-A.hmm|PF00142.18 evalue:7.3e-137 score:454.4 best_domain_score:454.2 name:Fer4_NifH;
sprot_desc Nitrogenase iron protein;
sprot_id sp|P26250|NIFH_NOSCO;
sprot_target db:uniprot_sprot|sp|P26250|NIFH_NOSCO 1 296 evalue:3.6e-152 qcov:99.30 identity:91.20;
tigrfam_acc TIGR01287;
tigrfam_desc nitrogenase iron protein;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name nifH;
tigrfam_sub1role Nitrogen fixation;
tigrfam_target db:TIGRFAMs.hmm|TIGR01287 evalue:1.8e-141 score:469.4 best_domain_score:469.2 name:TIGR01287;
12840 12553 CDS
ID metaerg.pl|12967
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092730.1 1 95 evalue:1.6e-46 qcov:100.00 identity:95.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
13283 14155 CDS
ID metaerg.pl|12968
allec_ids 3.4.24.-;
allgo_ids GO:0004222; GO:0006508; GO:0016021; GO:0005886; GO:0008270;
allko_ids K03799;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092729.1 1 282 evalue:1.1e-143 qcov:97.20 identity:96.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:8e-35 score:119.6 best_domain_score:119.1 name:Peptidase_M48;
sprot_desc Protease HtpX homolog;
sprot_id sp|Q8YUS1|HTPX_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YUS1|HTPX_NOSS1 1 289 evalue:3.0e-119 qcov:99.70 identity:78.90;
tm_num 4;
13283 14155 transmembrane_helix
ID metaerg.pl|12969
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
topology i13301-13360o13373-13426i13715-13783o13826-13894i;
14305 14706 CDS
ID metaerg.pl|12970
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092728.1 1 132 evalue:1.1e-58 qcov:99.20 identity:91.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
15464 14790 CDS
ID metaerg.pl|12971
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092727.1 1 224 evalue:2.2e-118 qcov:100.00 identity:96.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF01590; PF13492; PF00196;
pfam_desc GAF domain; GAF domain; Bacterial regulatory proteins, luxR family;
pfam_id GAF; GAF_3; GerE;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:2e-07 score:30.9 best_domain_score:30.0 name:GAF; db:Pfam-A.hmm|PF13492.6 evalue:2.2e-06 score:27.2 best_domain_score:26.0 name:GAF_3; db:Pfam-A.hmm|PF00196.19 evalue:1.6e-13 score:49.2 best_domain_score:48.5 name:GerE;
15567 16208 CDS
ID metaerg.pl|12972
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017803721.1 1 213 evalue:6.6e-117 qcov:100.00 identity:97.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF11866;
pfam_desc Protein of unknown function (DUF3386);
pfam_id DUF3386;
pfam_target db:Pfam-A.hmm|PF11866.8 evalue:6.9e-94 score:312.5 best_domain_score:312.4 name:DUF3386;
17129 16365 CDS
ID metaerg.pl|12973
allgo_ids GO:0015031;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Aulosira;s__Aulosira sp002154695;
genomedb_acc GCF_002154695.1;
genomedb_target db:genomedb|GCF_002154695.1|WP_086688036.1 1 253 evalue:2.2e-82 qcov:99.60 identity:61.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF04278;
pfam_desc Tic22-like family;
pfam_id Tic22;
pfam_target db:Pfam-A.hmm|PF04278.12 evalue:7.7e-22 score:77.1 best_domain_score:76.8 name:Tic22;
sp YES;
tm_num 1;
16365 16457 signal_peptide
ID metaerg.pl|12974
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
17129 16365 transmembrane_helix
ID metaerg.pl|12975
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
topology o16392-16460i;
20113 17822 CDS
ID metaerg.pl|12976
allec_ids 2.4.1.18;
allgo_ids GO:0003824; GO:0005975; GO:0003844; GO:0102752; GO:0043169; GO:0004553; GO:0005978;
allko_ids K01176; K01236; K00700; K01200;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092773.1 1 763 evalue:0.0e+00 qcov:100.00 identity:96.60;
kegg_pathway_id 00500;
kegg_pathway_name Starch and sucrose metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
metacyc_pathway_id GLYCOGENSYNTH-PWY; PWY-5067; PWY-622;
metacyc_pathway_name glycogen biosynthesis I (from ADP-D-Glucose);; glycogen biosynthesis II (from UDP-D-Glucose);; starch biosynthesis;;
metacyc_pathway_type GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;; GLYCOGEN-BIOSYN;;
pfam_acc PF00128; PF02806; PF02922;
pfam_desc Alpha amylase, catalytic domain; Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain);
pfam_id Alpha-amylase; Alpha-amylase_C; CBM_48;
pfam_target db:Pfam-A.hmm|PF00128.24 evalue:1.5e-14 score:53.6 best_domain_score:39.0 name:Alpha-amylase; db:Pfam-A.hmm|PF02806.18 evalue:2.1e-24 score:85.0 best_domain_score:83.7 name:Alpha-amylase_C; db:Pfam-A.hmm|PF02922.18 evalue:5.8e-34 score:115.6 best_domain_score:84.7 name:CBM_48;
sprot_desc 1,4-alpha-glucan branching enzyme GlgB;
sprot_id sp|Q8YYX9|GLGB_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YYX9|GLGB_NOSS1 1 762 evalue:0.0e+00 qcov:99.90 identity:87.80;
tigrfam_acc TIGR01515;
tigrfam_desc 1,4-alpha-glucan branching enzyme;
tigrfam_mainrole Energy metabolism;
tigrfam_name branching_enzym;
tigrfam_sub1role Biosynthesis and degradation of polysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01515 evalue:0 score:1055.6 best_domain_score:836.0 name:TIGR01515;
20661 20338 CDS
ID metaerg.pl|12977
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092772.1 1 107 evalue:7.1e-43 qcov:100.00 identity:84.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
sp YES;
tm_num 1;
20338 20418 signal_peptide
ID metaerg.pl|12978
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
20661 20338 transmembrane_helix
ID metaerg.pl|12979
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
topology i20356-20424o;
21349 20681 CDS
ID metaerg.pl|12980
allgo_ids GO:0005515;
allko_ids K00799;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094039.1 1 222 evalue:2.0e-116 qcov:100.00 identity:94.10;
kegg_pathway_id 00480;
kegg_pathway_name Glutathione metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF13417;
pfam_desc Glutathione S-transferase, N-terminal domain;
pfam_id GST_N_3;
pfam_target db:Pfam-A.hmm|PF13417.6 evalue:2e-14 score:53.0 best_domain_score:52.1 name:GST_N_3;
22379 23050 CDS
ID metaerg.pl|12981
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092771.1 1 223 evalue:3.5e-92 qcov:100.00 identity:79.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
tm_num 1;
22379 23050 transmembrane_helix
ID metaerg.pl|12982
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
topology i22739-22807o;
23375 25234 CDS
ID metaerg.pl|12983
allec_ids 3.4.16.4;
allgo_ids GO:0008658; GO:0031969; GO:0016021; GO:0009002; GO:0008360;
allko_ids K08384; K05364; K12556; K03587; K05366; K08282; K08884;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094038.1 62 619 evalue:1.1e-292 qcov:90.10 identity:91.90;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
metacyc_pathway_id PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF03717; PF00905;
pfam_desc Penicillin-binding Protein dimerisation domain; Penicillin binding protein transpeptidase domain;
pfam_id PBP_dimer; Transpeptidase;
pfam_target db:Pfam-A.hmm|PF03717.15 evalue:8.1e-12 score:45.1 best_domain_score:43.5 name:PBP_dimer; db:Pfam-A.hmm|PF00905.22 evalue:5.4e-76 score:255.0 best_domain_score:254.6 name:Transpeptidase;
sprot_desc Peptidoglycan D,D-transpeptidase FtsI homolog;
sprot_id sp|Q9MUV9|FTSIH_MESVI;
sprot_target db:uniprot_sprot|sp|Q9MUV9|FTSIH_MESVI 53 608 evalue:6.2e-122 qcov:89.80 identity:41.60;
tm_num 1;
23375 25234 transmembrane_helix
ID metaerg.pl|12984
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
topology i23534-23602o;
26468 25365 CDS
ID metaerg.pl|12985
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092511.1 1 367 evalue:1.9e-196 qcov:100.00 identity:93.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
26927 27595 CDS
ID metaerg.pl|12986
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092510.1 1 222 evalue:6.2e-118 qcov:100.00 identity:96.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF06967; PF05099;
pfam_desc Mo-dependent nitrogenase C-terminus; Tellurite resistance protein TerB;
pfam_id Mo-nitro_C; TerB;
pfam_target db:Pfam-A.hmm|PF06967.11 evalue:7.3e-44 score:146.9 best_domain_score:143.4 name:Mo-nitro_C; db:Pfam-A.hmm|PF05099.13 evalue:1.4e-09 score:37.3 best_domain_score:20.9 name:TerB;
27706 28746 CDS
ID metaerg.pl|12987
allec_ids 3.6.5.-;
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0000287; GO:0042254;
allko_ids K03979;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092509.1 1 346 evalue:7.0e-193 qcov:100.00 identity:99.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF00025; PF02421; PF01018; PF01926;
pfam_desc ADP-ribosylation factor family; Ferrous iron transport protein B; GTP1/OBG; 50S ribosome-binding GTPase;
pfam_id Arf; FeoB_N; GTP1_OBG; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00025.21 evalue:2.2e-05 score:23.2 best_domain_score:12.7 name:Arf; db:Pfam-A.hmm|PF02421.18 evalue:1.4e-10 score:40.2 best_domain_score:39.0 name:FeoB_N; db:Pfam-A.hmm|PF01018.22 evalue:1.1e-58 score:196.4 best_domain_score:196.0 name:GTP1_OBG; db:Pfam-A.hmm|PF01926.23 evalue:2.6e-26 score:91.2 best_domain_score:90.3 name:MMR_HSR1;
sprot_desc GTPase Obg;
sprot_id sp|Q3MCS7|OBG_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MCS7|OBG_ANAVT 1 339 evalue:8.7e-166 qcov:98.00 identity:85.00;
tigrfam_acc TIGR00231; TIGR02729;
tigrfam_desc small GTP-binding protein domain; Obg family GTPase CgtA;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; Obg_CgtA;
tigrfam_sub1role General; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:2.8e-12 score:45.9 best_domain_score:45.1 name:TIGR00231; db:TIGRFAMs.hmm|TIGR02729 evalue:5.4e-136 score:452.1 best_domain_score:451.9 name:TIGR02729;
29067 29648 CDS
ID metaerg.pl|12988
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017803726.1 1 193 evalue:7.9e-101 qcov:100.00 identity:95.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF05685;
pfam_desc Putative restriction endonuclease;
pfam_id Uma2;
pfam_target db:Pfam-A.hmm|PF05685.12 evalue:7.7e-35 score:119.2 best_domain_score:118.9 name:Uma2;
sprot_desc hypothetical protein;
sprot_id sp|P73844|Y1609_SYNY3;
sprot_target db:uniprot_sprot|sp|P73844|Y1609_SYNY3 13 161 evalue:1.0e-30 qcov:77.20 identity:42.30;
30811 29684 CDS
ID metaerg.pl|12989
allec_ids 2.3.1.78;
allgo_ids GO:0016021; GO:0005765; GO:0005886; GO:0035579; GO:0070821; GO:0015019; GO:0016746; GO:0006027; GO:0007041; GO:0043312; GO:0051259;
allko_ids K10532;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092487.1 1 375 evalue:2.6e-193 qcov:100.00 identity:90.40;
kegg_pathway_id 01032;
kegg_pathway_name Glycan structures - degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF16401;
pfam_desc Domain of unknown function (DUF5009);
pfam_id DUF5009;
pfam_target db:Pfam-A.hmm|PF16401.5 evalue:1.4e-09 score:37.0 best_domain_score:37.0 name:DUF5009;
sp YES;
sprot_desc Heparan-alpha-glucosaminide N-acetyltransferase;
sprot_id sp|Q68CP4|HGNAT_HUMAN;
sprot_target db:uniprot_sprot|sp|Q68CP4|HGNAT_HUMAN 2 375 evalue:5.1e-26 qcov:99.70 identity:26.60;
tm_num 10;
29684 29764 signal_peptide
ID metaerg.pl|12990
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
30811 29684 transmembrane_helix
ID metaerg.pl|12991
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
topology i29708-29776o29819-29887i29921-29989o30017-30085i30098-30157o30281-30334i30371-30439o30467-30535i30569-30637o30695-30763i;
30946 31632 CDS
ID metaerg.pl|12992
allec_ids 3.5.1.-;
allgo_ids GO:0005975; GO:0016810; GO:0005737; GO:0046872; GO:0009877;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092486.1 1 228 evalue:5.2e-128 qcov:100.00 identity:94.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
metacyc_pathway_id PWY-0; PWY-6548; PWY-1822; PWY-5327; LYSDEGII-PWY; PWY-5784;
metacyc_pathway_name putrescine degradation III;; ; indole-3-acetate activation I;; superpathway of L-lysine degradation;; L-lysine degradation III;; indole-3-acetate inactivation VIII;;
metacyc_pathway_type Putrescine-Degradation;; ; Activation;; LYSINE-DEG; Super-Pathways;; LYSINE-DEG;; Indole-3-Acetate-Inactivation;;
pfam_acc PF01522;
pfam_desc Polysaccharide deacetylase;
pfam_id Polysacc_deac_1;
pfam_target db:Pfam-A.hmm|PF01522.21 evalue:5.8e-23 score:80.4 best_domain_score:80.0 name:Polysacc_deac_1;
sprot_desc Chitooligosaccharide deacetylase;
sprot_id sp|P04675|NODB_BRASP;
sprot_target db:uniprot_sprot|sp|P04675|NODB_BRASP 30 211 evalue:4.0e-26 qcov:79.80 identity:32.10;
32168 31872 CDS
ID metaerg.pl|12993
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094017.1 11 98 evalue:3.0e-40 qcov:89.80 identity:96.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
33193 32699 CDS
ID metaerg.pl|12994
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Scytonema;s__Scytonema hofmannii;
genomedb_acc GCF_000346485.2;
genomedb_target db:genomedb|GCF_000346485.2|WP_017748843.1 9 154 evalue:1.0e-69 qcov:89.00 identity:86.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF13175; PF13304;
pfam_desc AAA ATPase domain; AAA domain, putative AbiEii toxin, Type IV TA system;
pfam_id AAA_15; AAA_21;
pfam_target db:Pfam-A.hmm|PF13175.6 evalue:5.4e-11 score:42.0 best_domain_score:41.7 name:AAA_15; db:Pfam-A.hmm|PF13304.6 evalue:1.7e-18 score:66.7 best_domain_score:66.4 name:AAA_21;
35379 33481 CDS
ID metaerg.pl|12995
allec_ids 2.6.1.16;
allgo_ids GO:0097367; GO:1901135; GO:0005737; GO:0004360; GO:1901137; GO:0005975; GO:0006541;
allko_ids K00820;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092468.1 1 632 evalue:0.0e+00 qcov:100.00 identity:97.20;
kegg_pathway_id 00530; 00251;
kegg_pathway_name Aminosugars metabolism; Glutamate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
metacyc_pathway_id OANTIGEN-PWY; PWY-6404; UDPNAGSYN-PWY; UDPNACETYLGALSYN-PWY;
metacyc_pathway_name O-antigen building blocks biosynthesis (E. coli);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; UDP-N-acetyl-D-glucosamine biosynthesis I;; UDP-N-acetyl-D-glucosamine biosynthesis II;;
metacyc_pathway_type Metabolic-Clusters; SUGAR-NUCLEOTIDES; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; UDP-NAc-Glucosamine-Biosynthesis;; UDP-NAc-Glucosamine-Biosynthesis;;
pfam_acc PF13522; PF13537; PF01380;
pfam_desc Glutamine amidotransferase domain; Glutamine amidotransferase domain; SIS domain;
pfam_id GATase_6; GATase_7; SIS;
pfam_target db:Pfam-A.hmm|PF13522.6 evalue:9.9e-21 score:73.6 best_domain_score:72.3 name:GATase_6; db:Pfam-A.hmm|PF13537.6 evalue:7.1e-18 score:63.9 best_domain_score:63.1 name:GATase_7; db:Pfam-A.hmm|PF01380.22 evalue:1.6e-44 score:150.1 best_domain_score:75.6 name:SIS;
sprot_desc Glutamine--fructose-6-phosphate aminotransferase [isomerizing];
sprot_id sp|O68280|GLMS_NOSS9;
sprot_target db:uniprot_sprot|sp|O68280|GLMS_NOSS9 1 632 evalue:3.5e-298 qcov:100.00 identity:83.70;
tigrfam_acc TIGR01135;
tigrfam_desc glutamine-fructose-6-phosphate transaminase (isomerizing);
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name glmS;
tigrfam_sub1role Amino sugars;
tigrfam_target db:TIGRFAMs.hmm|TIGR01135 evalue:3.3e-241 score:801.2 best_domain_score:801.0 name:TIGR01135;
35966 35721 CDS
ID metaerg.pl|12996
allec_ids 1.97.1.12;
allgo_ids GO:0009535; GO:0009522; GO:0051539; GO:0009055; GO:0046872; GO:0009773;
allko_ids K00226; K00335; K00125; K00171; K00441; K00336; K00205; K00390; K08349; K00207; K03388; K00170; K05588; K00176; K00533; K00436; K00124; K05580; K00172; K11181; K00338; K00265; K00395; K00240; K00371; K00123; K00532; K00443; K00266; K04014; K00122; K11260; K03941; K00204; K00337; K00873;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Anabaena_A;s__Anabaena_A cylindrica;
genomedb_acc GCF_000317695.1;
genomedb_target db:genomedb|GCF_000317695.1|WP_015215228.1 1 81 evalue:7.7e-42 qcov:100.00 identity:100.00;
kegg_pathway_id 00230; 00770; 00020; 00010; 00710; 00920; 00680; 00130; 00410; 00190; 02020; 00910; 00251; 00633; 00632; 00240; 00983; 00720; 00790; 00650; 00640; 00630; 05012; 00450; 00620;
kegg_pathway_name Purine metabolism; Pantothenate and CoA biosynthesis; Citrate cycle (TCA cycle); Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Sulfur metabolism; Methane metabolism; Ubiquinone biosynthesis; beta-Alanine metabolism; Oxidative phosphorylation; Two-component system - General; Nitrogen metabolism; Glutamate metabolism; Trinitrotoluene degradation; Benzoate degradation via CoA ligation; Pyrimidine metabolism; Drug metabolism - other enzymes; Reductive carboxylate cycle (CO2 fixation); Folate biosynthesis; Butanoate metabolism; Propanoate metabolism; Glyoxylate and dicarboxylate metabolism; Parkinson's disease; Selenoamino acid metabolism; Pyruvate metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF00037; PF13237; PF13484; PF13534; PF12797; PF14697; PF17179; PF12800; PF12837; PF12838; PF13187;
pfam_desc 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S double cluster binding domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain; 4Fe-4S binding domain; 4Fe-4S binding domain; 4Fe-4S dicluster domain; 4Fe-4S dicluster domain;
pfam_id Fer4; Fer4_10; Fer4_16; Fer4_17; Fer4_2; Fer4_21; Fer4_22; Fer4_4; Fer4_6; Fer4_7; Fer4_9;
pfam_target db:Pfam-A.hmm|PF00037.27 evalue:7.8e-15 score:53.2 best_domain_score:30.2 name:Fer4; db:Pfam-A.hmm|PF13237.6 evalue:1.3e-09 score:37.2 best_domain_score:28.0 name:Fer4_10; db:Pfam-A.hmm|PF13484.6 evalue:1.2e-08 score:35.0 best_domain_score:20.5 name:Fer4_16; db:Pfam-A.hmm|PF13534.6 evalue:6.6e-09 score:35.4 best_domain_score:20.9 name:Fer4_17; db:Pfam-A.hmm|PF12797.7 evalue:1.1e-07 score:30.8 best_domain_score:19.7 name:Fer4_2; db:Pfam-A.hmm|PF14697.6 evalue:2.8e-09 score:36.2 best_domain_score:35.5 name:Fer4_21; db:Pfam-A.hmm|PF17179.4 evalue:2.8e-06 score:27.3 best_domain_score:20.0 name:Fer4_22; db:Pfam-A.hmm|PF12800.7 evalue:1.4e-08 score:33.9 best_domain_score:21.6 name:Fer4_4; db:Pfam-A.hmm|PF12837.7 evalue:3.9e-11 score:41.8 best_domain_score:25.9 name:Fer4_6; db:Pfam-A.hmm|PF12838.7 evalue:5.2e-10 score:39.0 best_domain_score:38.2 name:Fer4_7; db:Pfam-A.hmm|PF13187.6 evalue:2.5e-08 score:33.2 best_domain_score:32.0 name:Fer4_9;
sprot_desc Photosystem I iron-sulfur center;
sprot_id sp|P56301|PSAC_CHLVU;
sprot_target db:uniprot_sprot|sp|P56301|PSAC_CHLVU 1 81 evalue:6.6e-24 qcov:100.00 identity:97.50;
tigrfam_acc TIGR03048;
tigrfam_desc photosystem I iron-sulfur protein PsaC;
tigrfam_mainrole Energy metabolism;
tigrfam_name PS_I_psaC;
tigrfam_sub1role Photosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR03048 evalue:1.3e-56 score:187.9 best_domain_score:187.8 name:TIGR03048;
36394 36753 CDS
ID metaerg.pl|12997
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092467.1 1 119 evalue:3.5e-59 qcov:100.00 identity:93.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
37751 36750 CDS
ID metaerg.pl|12998
allec_ids 2.1.2.9;
allgo_ids GO:0009058; GO:0016742; GO:0004479;
allko_ids K00604;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092466.1 1 333 evalue:2.6e-176 qcov:100.00 identity:93.10;
kegg_pathway_id 00271; 00670; 00970;
kegg_pathway_name Methionine metabolism; One carbon pool by folate; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF02911; PF00551;
pfam_desc Formyl transferase, C-terminal domain; Formyl transferase;
pfam_id Formyl_trans_C; Formyl_trans_N;
pfam_target db:Pfam-A.hmm|PF02911.18 evalue:2.4e-19 score:68.7 best_domain_score:67.4 name:Formyl_trans_C; db:Pfam-A.hmm|PF00551.19 evalue:1.2e-37 score:128.6 best_domain_score:128.3 name:Formyl_trans_N;
sprot_desc Methionyl-tRNA formyltransferase;
sprot_id sp|Q3M7E8|FMT_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M7E8|FMT_ANAVT 1 333 evalue:1.7e-150 qcov:100.00 identity:78.40;
tigrfam_acc TIGR00460;
tigrfam_desc methionyl-tRNA formyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name fmt;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00460 evalue:8.6e-83 score:277.2 best_domain_score:276.0 name:TIGR00460;
38800 40092 CDS
ID metaerg.pl|12999
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089094015.1 24 430 evalue:5.7e-192 qcov:94.70 identity:85.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
sp YES;
38800 38895 signal_peptide
ID metaerg.pl|13000
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
40359 39904 CDS
ID metaerg.pl|13001
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
40687 40388 CDS
ID metaerg.pl|13002
allgo_ids GO:0032955; GO:0051301; GO:0007049;
allko_ids K03608;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092465.1 1 99 evalue:1.1e-42 qcov:100.00 identity:97.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF03776;
pfam_desc Septum formation topological specificity factor MinE;
pfam_id MinE;
pfam_target db:Pfam-A.hmm|PF03776.14 evalue:4.9e-22 score:76.9 best_domain_score:76.6 name:MinE;
sprot_desc Cell division topological specificity factor;
sprot_id sp|B2J2X2|MINE_NOSP7;
sprot_target db:uniprot_sprot|sp|B2J2X2|MINE_NOSP7 2 97 evalue:3.5e-35 qcov:97.00 identity:80.20;
tigrfam_acc TIGR01215;
tigrfam_desc cell division topological specificity factor MinE;
tigrfam_mainrole Cellular processes;
tigrfam_name minE;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR01215 evalue:4.1e-26 score:90.0 best_domain_score:89.7 name:TIGR01215;
41530 40724 CDS
ID metaerg.pl|13003
allgo_ids GO:0005524; GO:0016491; GO:0055114; GO:0009507; GO:0016887; GO:0000917;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092464.1 1 267 evalue:1.3e-138 qcov:99.60 identity:98.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF13614; PF02374; PF01656; PF06564; PF00142; PF09140; PF10609;
pfam_desc AAA domain; Anion-transporting ATPase; CobQ/CobB/MinD/ParA nucleotide binding domain; Cellulose biosynthesis protein BcsQ; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; ATPase MipZ; NUBPL iron-transfer P-loop NTPase;
pfam_id AAA_31; ArsA_ATPase; CbiA; CBP_BcsQ; Fer4_NifH; MipZ; ParA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:2.8e-20 score:72.2 best_domain_score:71.1 name:AAA_31; db:Pfam-A.hmm|PF02374.15 evalue:5.8e-12 score:44.6 best_domain_score:31.7 name:ArsA_ATPase; db:Pfam-A.hmm|PF01656.23 evalue:7.1e-25 score:86.8 best_domain_score:85.9 name:CbiA; db:Pfam-A.hmm|PF06564.12 evalue:7.5e-14 score:51.0 best_domain_score:50.6 name:CBP_BcsQ; db:Pfam-A.hmm|PF00142.18 evalue:4.1e-09 score:35.5 best_domain_score:20.1 name:Fer4_NifH; db:Pfam-A.hmm|PF09140.11 evalue:2e-10 score:39.6 best_domain_score:38.5 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:7.1e-22 score:77.3 best_domain_score:73.3 name:ParA;
sprot_desc Putative septum site-determining protein MinD;
sprot_id sp|O78436|MIND_GUITH;
sprot_target db:uniprot_sprot|sp|O78436|MIND_GUITH 1 261 evalue:4.9e-100 qcov:97.40 identity:70.90;
tigrfam_acc TIGR01968;
tigrfam_desc septum site-determining protein MinD;
tigrfam_mainrole Cellular processes;
tigrfam_name minD_bact;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR01968 evalue:2.4e-122 score:406.5 best_domain_score:406.3 name:TIGR01968;
42639 41575 CDS
ID metaerg.pl|13004
allgo_ids GO:0000902; GO:0000917; GO:1901891;
allko_ids K03610;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092463.1 1 354 evalue:2.2e-173 qcov:100.00 identity:90.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF03775;
pfam_desc Septum formation inhibitor MinC, C-terminal domain;
pfam_id MinC_C;
pfam_target db:Pfam-A.hmm|PF03775.16 evalue:7.3e-31 score:105.4 best_domain_score:104.5 name:MinC_C;
sprot_desc Probable septum site-determining protein MinC;
sprot_id sp|Q8YRJ1|MINC_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YRJ1|MINC_NOSS1 105 354 evalue:9.4e-107 qcov:70.60 identity:77.60;
44059 42713 CDS
ID metaerg.pl|13005
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092462.1 1 448 evalue:2.8e-234 qcov:100.00 identity:92.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF17042; PF07005;
pfam_desc Nucleotide-binding C-terminal domain; Sugar-binding N-terminal domain;
pfam_id NBD_C; SBD_N;
pfam_target db:Pfam-A.hmm|PF17042.5 evalue:9.4e-38 score:129.6 best_domain_score:129.4 name:NBD_C; db:Pfam-A.hmm|PF07005.11 evalue:4.8e-59 score:199.1 best_domain_score:198.4 name:SBD_N;
44763 44173 CDS
ID metaerg.pl|13006
allec_ids 3.6.1.13;
allgo_ids GO:0016787; GO:0005829; GO:0047631; GO:0046872; GO:0006753; GO:0019693;
allko_ids K01515;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092460.1 9 190 evalue:5.0e-79 qcov:92.90 identity:81.30;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:2.8e-12 score:46.1 best_domain_score:45.6 name:NUDIX;
sprot_desc ADP-ribose pyrophosphatase;
sprot_id sp|P54570|ADPP_BACSU;
sprot_target db:uniprot_sprot|sp|P54570|ADPP_BACSU 16 182 evalue:4.7e-15 qcov:85.20 identity:31.50;
44857 45909 CDS
ID metaerg.pl|13007
allec_ids 5.1.1.-;
allgo_ids GO:0000287; GO:0016854; GO:0016855; GO:0009063; GO:0006518;
allko_ids K01684; K01856; K01631; K01781;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092459.1 1 350 evalue:1.5e-190 qcov:100.00 identity:92.90;
kegg_pathway_id 00052; 00364; 00362; 00622;
kegg_pathway_name Galactose metabolism; Fluorobenzoate degradation; Benzoate degradation via hydroxylation; Toluene and xylene degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF13378; PF02746;
pfam_desc Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain;
pfam_id MR_MLE_C; MR_MLE_N;
pfam_target db:Pfam-A.hmm|PF13378.6 evalue:3.4e-38 score:130.6 best_domain_score:130.1 name:MR_MLE_C; db:Pfam-A.hmm|PF02746.16 evalue:6.6e-16 score:57.8 best_domain_score:57.2 name:MR_MLE_N;
sprot_desc Hydrophobic dipeptide epimerase;
sprot_id sp|C0BK17|HYEP_FLABM;
sprot_target db:uniprot_sprot|sp|C0BK17|HYEP_FLABM 9 347 evalue:1.4e-70 qcov:96.90 identity:43.30;
45893 46939 CDS
ID metaerg.pl|13008
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092458.1 1 348 evalue:1.7e-183 qcov:100.00 identity:94.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF07755; PF17396;
pfam_desc Domain of unknown function (DUF1611_C) P-loop domain; Domain of unknown function (DUF1611_N) Rossmann-like domain;
pfam_id DUF1611; DUF1611_N;
pfam_target db:Pfam-A.hmm|PF07755.11 evalue:1.4e-68 score:229.4 best_domain_score:228.7 name:DUF1611; db:Pfam-A.hmm|PF17396.2 evalue:1.1e-26 score:92.1 best_domain_score:91.3 name:DUF1611_N;
47278 47039 CDS
ID metaerg.pl|13009
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092457.1 1 79 evalue:1.2e-34 qcov:100.00 identity:91.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
tm_num 1;
47278 47039 transmembrane_helix
ID metaerg.pl|13010
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
topology i47204-47263o;
47551 47339 CDS
ID metaerg.pl|13011
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092456.1 1 70 evalue:1.9e-28 qcov:100.00 identity:92.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF00504;
pfam_desc Chlorophyll A-B binding protein;
pfam_id Chloroa_b-bind;
pfam_target db:Pfam-A.hmm|PF00504.21 evalue:1.7e-05 score:24.6 best_domain_score:24.6 name:Chloroa_b-bind;
tm_num 1;
47551 47339 transmembrane_helix
ID metaerg.pl|13012
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
topology i47468-47536o;
47855 48889 CDS
ID metaerg.pl|13013
allec_ids 2.1.3.2;
allgo_ids GO:0006520; GO:0016597; GO:0016743; GO:0004070; GO:0006207; GO:0044205;
allko_ids K11541; K01955; K00610; K01956; K01954; K00609; K11540;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092455.1 1 344 evalue:4.3e-182 qcov:100.00 identity:96.20;
kegg_pathway_id 00252; 00251; 00240;
kegg_pathway_name Alanine and aspartate metabolism; Glutamate metabolism; Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
metacyc_pathway_id PWY0-162; PRPP-PWY; PWY-5686;
metacyc_pathway_name superpathway of pyrimidine ribonucleotides de novo biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;;
metacyc_pathway_type Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; Super-Pathways;; UMP-Biosynthesis;;
pfam_acc PF00185; PF02729;
pfam_desc Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain;
pfam_id OTCace; OTCace_N;
pfam_target db:Pfam-A.hmm|PF00185.24 evalue:3.8e-28 score:97.8 best_domain_score:96.1 name:OTCace; db:Pfam-A.hmm|PF02729.21 evalue:3.8e-40 score:136.5 best_domain_score:136.0 name:OTCace_N;
sprot_desc Aspartate carbamoyltransferase;
sprot_id sp|Q3MDY8|PYRB_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MDY8|PYRB_ANAVT 1 337 evalue:7.4e-165 qcov:98.00 identity:87.20;
tigrfam_acc TIGR00670;
tigrfam_desc aspartate carbamoyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name asp_carb_tr;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00670 evalue:1.9e-101 score:338.3 best_domain_score:338.0 name:TIGR00670;
49333 49770 CDS
ID metaerg.pl|13014
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092451.1 1 144 evalue:1.5e-67 qcov:99.30 identity:95.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF00805; PF13576; PF13599;
pfam_desc Pentapeptide repeats (8 copies); Pentapeptide repeats (9 copies); Pentapeptide repeats (9 copies);
pfam_id Pentapeptide; Pentapeptide_3; Pentapeptide_4;
pfam_target db:Pfam-A.hmm|PF00805.22 evalue:9.4e-30 score:101.1 best_domain_score:59.4 name:Pentapeptide; db:Pfam-A.hmm|PF13576.6 evalue:6.4e-13 score:47.9 best_domain_score:25.7 name:Pentapeptide_3; db:Pfam-A.hmm|PF13599.6 evalue:3.3e-18 score:64.9 best_domain_score:42.5 name:Pentapeptide_4;
sp YES;
49333 49401 signal_peptide
ID metaerg.pl|13015
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
51149 49809 CDS
ID metaerg.pl|13016
allgo_ids GO:0006508; GO:0008237;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092450.1 1 446 evalue:1.9e-243 qcov:100.00 identity:96.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF01523;
pfam_desc Putative modulator of DNA gyrase;
pfam_id PmbA_TldD;
pfam_target db:Pfam-A.hmm|PF01523.16 evalue:2.6e-52 score:177.6 best_domain_score:177.2 name:PmbA_TldD;
52736 51264 CDS
ID metaerg.pl|13017
allec_ids 3.4.-.-;
allgo_ids GO:0006508; GO:0008237; GO:0005829;
allko_ids K03568;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092449.1 1 490 evalue:1.4e-282 qcov:100.00 identity:98.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF01523;
pfam_desc Putative modulator of DNA gyrase;
pfam_id PmbA_TldD;
pfam_target db:Pfam-A.hmm|PF01523.16 evalue:2.5e-51 score:174.4 best_domain_score:174.0 name:PmbA_TldD;
sprot_desc Metalloprotease slr1322;
sprot_id sp|P74002|Y1322_SYNY3;
sprot_target db:uniprot_sprot|sp|P74002|Y1322_SYNY3 5 490 evalue:1.0e-212 qcov:99.20 identity:74.30;
53070 53483 CDS
ID metaerg.pl|13018
allec_ids 3.1.1.29;
allgo_ids GO:0003747; GO:0006415; GO:0005737; GO:0004045;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006195275.1 1 137 evalue:9.6e-61 qcov:100.00 identity:95.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 72.1661; 0.017341; 72.1406; ; 0.00809997;
pfam_acc PF00472;
pfam_desc RF-1 domain;
pfam_id RF-1;
pfam_target db:Pfam-A.hmm|PF00472.20 evalue:1.3e-25 score:88.9 best_domain_score:88.5 name:RF-1;
sprot_desc Peptidyl-tRNA hydrolase ArfB;
sprot_id sp|P45388|ARFB_PSEPU;
sprot_target db:uniprot_sprot|sp|P45388|ARFB_PSEPU 1 135 evalue:4.1e-34 qcov:98.50 identity:57.80;
>Feature NODE_396_length_47810_cov_9.34581
326 1 bac_16SrRNA
ID metaerg.pl|13019
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JN825334.1.1448 1 322 evalue:1.06e-164 qcov:99 identity:99.379;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Phormidesmiales;Nodosilineaceae;Nodosilinea PCC-7104;
1111 1998 CDS
ID metaerg.pl|13020
allec_ids 6.1.1.14;
allgo_ids GO:0000166; GO:0004820; GO:0005524; GO:0005737; GO:0006426;
allko_ids K01878;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO45383.1 1 295 evalue:9.0e-165 qcov:100.00 identity:93.20;
kegg_pathway_id 00260; 00970;
kegg_pathway_name Glycine, serine and threonine metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF02091;
pfam_desc Glycyl-tRNA synthetase alpha subunit;
pfam_id tRNA-synt_2e;
pfam_target db:Pfam-A.hmm|PF02091.15 evalue:2.4e-146 score:485.5 best_domain_score:485.3 name:tRNA-synt_2e;
sprot_desc Glycine--tRNA ligase alpha subunit;
sprot_id sp|Q8DK36|SYGA_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DK36|SYGA_THEEB 1 287 evalue:2.7e-147 qcov:97.30 identity:82.90;
tigrfam_acc TIGR00388;
tigrfam_desc glycine--tRNA ligase, alpha subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name glyQ;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00388 evalue:4.5e-158 score:524.2 best_domain_score:524.0 name:TIGR00388;
2173 3933 CDS
ID metaerg.pl|13021
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Desertifilaceae;g__Desertifilum;s__Desertifilum sp001746915;
genomedb_acc GCF_001746915.1;
genomedb_target db:genomedb|GCF_001746915.1|WP_069968566.1 66 582 evalue:1.6e-149 qcov:88.20 identity:51.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
tm_num 2;
2173 3933 transmembrane_helix
ID metaerg.pl|13022
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
topology o3565-3633i3694-3762o;
4962 3982 CDS
ID metaerg.pl|13023
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035985975.1 1 326 evalue:4.8e-127 qcov:100.00 identity:65.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
tm_num 1;
4962 3982 transmembrane_helix
ID metaerg.pl|13024
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
topology i4039-4107o;
5035 5598 CDS
ID metaerg.pl|13025
allgo_ids GO:0016020;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO37831.1 1 184 evalue:1.9e-59 qcov:98.40 identity:66.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF04893;
pfam_desc Yip1 domain;
pfam_id Yip1;
pfam_target db:Pfam-A.hmm|PF04893.17 evalue:3.5e-08 score:32.6 best_domain_score:32.2 name:Yip1;
tm_num 4;
5035 5598 transmembrane_helix
ID metaerg.pl|13026
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
topology i5143-5211o5221-5289i5350-5418o5509-5577i;
7016 5838 CDS
ID metaerg.pl|13027
allec_ids 2.2.1.2;
allgo_ids GO:0005509; GO:0005737; GO:0004801; GO:0005975; GO:0006098;
allko_ids K00616;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106922491.1 1 389 evalue:4.1e-197 qcov:99.20 identity:88.40;
kegg_pathway_id 00030;
kegg_pathway_name Pentose phosphate pathway;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
metacyc_pathway_id NONOXIPENT-PWY; P185-PWY; P124-PWY; PWY-1861; PWY-5723; PENTOSE-P-PWY;
metacyc_pathway_name pentose phosphate pathway (non-oxidative branch);; formaldehyde assimilation III (dihydroxyacetone cycle);; Bifidobacterium shunt;; formaldehyde assimilation II (assimilatory RuMP Cycle);; Rubisco shunt;; pentose phosphate pathway;;
metacyc_pathway_type Pentose-Phosphate-Cycle;; Formaldehyde-Assimilation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; Energy-Metabolism;; Pentose-Phosphate-Cycle; Super-Pathways;;
pfam_acc PF00036; PF13202; PF13405; PF13499; PF00923;
pfam_desc EF hand; EF hand; EF-hand domain; EF-hand domain pair; Transaldolase/Fructose-6-phosphate aldolase;
pfam_id EF-hand_1; EF-hand_5; EF-hand_6; EF-hand_7; TAL_FSA;
pfam_target db:Pfam-A.hmm|PF00036.32 evalue:8.5e-12 score:43.0 best_domain_score:23.3 name:EF-hand_1; db:Pfam-A.hmm|PF13202.6 evalue:1.5e-14 score:51.9 best_domain_score:27.1 name:EF-hand_5; db:Pfam-A.hmm|PF13405.6 evalue:3.5e-11 score:41.3 best_domain_score:21.5 name:EF-hand_6; db:Pfam-A.hmm|PF13499.6 evalue:3e-07 score:30.0 best_domain_score:15.3 name:EF-hand_7; db:Pfam-A.hmm|PF00923.19 evalue:1.4e-99 score:332.3 best_domain_score:332.1 name:TAL_FSA;
sprot_desc Transaldolase;
sprot_id sp|Q7NK81|TAL_GLOVI;
sprot_target db:uniprot_sprot|sp|Q7NK81|TAL_GLOVI 3 390 evalue:4.8e-152 qcov:99.00 identity:74.70;
tigrfam_acc TIGR00874;
tigrfam_desc transaldolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name talAB;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00874 evalue:4.2e-147 score:488.8 best_domain_score:488.5 name:TIGR00874;
7439 8833 CDS
ID metaerg.pl|13028
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035991114.1 1 464 evalue:5.9e-219 qcov:100.00 identity:83.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF04932;
pfam_desc O-Antigen ligase;
pfam_id Wzy_C;
pfam_target db:Pfam-A.hmm|PF04932.15 evalue:1.3e-18 score:66.4 best_domain_score:66.4 name:Wzy_C;
tigrfam_acc TIGR00947;
tigrfam_desc putative bicarbonate transporter, IctB family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name 2A73;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00947 evalue:3.5e-174 score:578.9 best_domain_score:578.7 name:TIGR00947;
tm_num 11;
7439 8833 transmembrane_helix
ID metaerg.pl|13029
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
topology o7577-7681i7700-7768o7778-7846i7880-7948o8036-8095i8114-8167o8180-8248i8267-8335o8528-8596i8657-8716o8744-8797i;
9411 8956 CDS
ID metaerg.pl|13030
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO37130.1 17 149 evalue:5.8e-51 qcov:88.10 identity:75.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF08780;
pfam_desc Nucleotidyltransferase substrate binding protein like;
pfam_id NTase_sub_bind;
pfam_target db:Pfam-A.hmm|PF08780.11 evalue:8.4e-32 score:109.0 best_domain_score:108.8 name:NTase_sub_bind;
tigrfam_acc TIGR01987;
tigrfam_desc nucleotidyltransferase substrate binding protein, HI0074 family;
tigrfam_name HI0074;
tigrfam_target db:TIGRFAMs.hmm|TIGR01987 evalue:4.2e-25 score:87.3 best_domain_score:87.1 name:TIGR01987;
9523 10071 CDS
ID metaerg.pl|13031
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Elainellales;f__Elainellaceae;g__Elainella;s__Elainella saxicola;
genomedb_acc GCA_002796835.1;
genomedb_target db:genomedb|GCA_002796835.1|LUGL01000148.1_4 1 182 evalue:9.1e-75 qcov:100.00 identity:72.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF05685;
pfam_desc Putative restriction endonuclease;
pfam_id Uma2;
pfam_target db:Pfam-A.hmm|PF05685.12 evalue:7.2e-29 score:99.8 best_domain_score:99.6 name:Uma2;
10165 10662 CDS
ID metaerg.pl|13032
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Tolypothrix_C;s__Tolypothrix_C sp002218085;
genomedb_acc GCF_002218085.1;
genomedb_target db:genomedb|GCF_002218085.1|WP_089128574.1 5 163 evalue:1.1e-53 qcov:96.40 identity:68.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
10655 10852 CDS
ID metaerg.pl|13033
allgo_ids GO:0003676; GO:0004519;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_026072401.1 1 65 evalue:5.3e-25 qcov:100.00 identity:81.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF01844; PF13395; PF14279;
pfam_desc HNH endonuclease; HNH endonuclease; HNH endonuclease;
pfam_id HNH; HNH_4; HNH_5;
pfam_target db:Pfam-A.hmm|PF01844.23 evalue:1e-13 score:50.4 best_domain_score:50.1 name:HNH; db:Pfam-A.hmm|PF13395.6 evalue:1.6e-07 score:30.3 best_domain_score:29.8 name:HNH_4; db:Pfam-A.hmm|PF14279.6 evalue:1.4e-11 score:43.3 best_domain_score:42.7 name:HNH_5;
10943 11464 CDS
ID metaerg.pl|13034
allgo_ids GO:0016491;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO38056.1 1 173 evalue:3.3e-66 qcov:100.00 identity:75.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF03358;
pfam_desc NADPH-dependent FMN reductase;
pfam_id FMN_red;
pfam_target db:Pfam-A.hmm|PF03358.15 evalue:7.8e-25 score:86.7 best_domain_score:86.4 name:FMN_red;
14042 11472 CDS
ID metaerg.pl|13035
allec_ids 3.6.4.-;
allgo_ids GO:0003676; GO:0005524; GO:0004386;
allko_ids K05591; K13131; K05592; K03725; K12614; K13182; K12812; K01509; K03724;
casgene_acc cd09639_cas3_CAS-I;
casgene_name cas3;
casgene_target db:casgenes.hmm|cd09639_cas3_CAS-I evalue:1.7e-10 score:39.7 best_domain_score:38.0 name:cas3;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO37129.1 15 856 evalue:0.0e+00 qcov:98.40 identity:85.20;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF00270; PF08494; PF00271; PF04851;
pfam_desc DEAD/DEAH box helicase; DEAD/H associated; Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit;
pfam_id DEAD; DEAD_assoc; Helicase_C; ResIII;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:1.5e-28 score:99.0 best_domain_score:98.1 name:DEAD; db:Pfam-A.hmm|PF08494.11 evalue:2.6e-51 score:173.4 best_domain_score:172.5 name:DEAD_assoc; db:Pfam-A.hmm|PF00271.31 evalue:3.8e-15 score:55.4 best_domain_score:54.0 name:Helicase_C; db:Pfam-A.hmm|PF04851.15 evalue:6.1e-09 score:35.3 best_domain_score:33.8 name:ResIII;
sprot_desc Uncharacterized ATP-dependent helicase MTH_1802;
sprot_id sp|O27830|HELX_METTH;
sprot_target db:uniprot_sprot|sp|O27830|HELX_METTH 45 849 evalue:1.1e-71 qcov:94.00 identity:28.10;
tigrfam_acc TIGR04121;
tigrfam_desc DEXH box helicase, DNA ligase-associated;
tigrfam_name DEXH_lig_assoc;
tigrfam_target db:TIGRFAMs.hmm|TIGR04121 evalue:0 score:1068.1 best_domain_score:781.4 name:TIGR04121;
14942 14043 CDS
ID metaerg.pl|13036
allec_ids 1.13.11.24;
allgo_ids GO:0046872; GO:0008127;
allko_ids K06911;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017300600.1 1 295 evalue:3.2e-141 qcov:98.70 identity:80.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF02678; PF05726;
pfam_desc Pirin; Pirin C-terminal cupin domain;
pfam_id Pirin; Pirin_C;
pfam_target db:Pfam-A.hmm|PF02678.16 evalue:2.9e-31 score:106.9 best_domain_score:106.0 name:Pirin; db:Pfam-A.hmm|PF05726.13 evalue:1.7e-24 score:85.4 best_domain_score:83.4 name:Pirin_C;
sprot_desc Putative quercetin 2,3-dioxygenase PA2418;
sprot_id sp|Q9I163|Y2418_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I163|Y2418_PSEAE 22 291 evalue:1.6e-91 qcov:90.30 identity:58.50;
15221 15856 CDS
ID metaerg.pl|13037
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035985064.1 1 211 evalue:7.6e-49 qcov:100.00 identity:52.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF08239;
pfam_desc Bacterial SH3 domain;
pfam_id SH3_3;
pfam_target db:Pfam-A.hmm|PF08239.11 evalue:5.5e-07 score:29.0 best_domain_score:23.1 name:SH3_3;
sp YES;
15221 15307 signal_peptide
ID metaerg.pl|13038
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
16245 15901 CDS
ID metaerg.pl|13039
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017298744.1 1 113 evalue:6.8e-44 qcov:99.10 identity:76.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
16506 17159 CDS
ID metaerg.pl|13040
allec_ids 1.8.4.11;
allgo_ids GO:0008113; GO:0055114; GO:0006464;
allko_ids K07304; K07305; K12267;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_081972638.1 1 216 evalue:6.8e-85 qcov:99.50 identity:69.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF01625;
pfam_desc Peptide methionine sulfoxide reductase;
pfam_id PMSR;
pfam_target db:Pfam-A.hmm|PF01625.21 evalue:6.4e-58 score:194.5 best_domain_score:194.2 name:PMSR;
sp YES;
sprot_desc Peptide methionine sulfoxide reductase MsrA;
sprot_id sp|Q92AE8|MSRA_LISIN;
sprot_target db:uniprot_sprot|sp|Q92AE8|MSRA_LISIN 44 215 evalue:1.2e-48 qcov:79.30 identity:51.70;
tigrfam_acc TIGR00401;
tigrfam_desc peptide-methionine (S)-S-oxide reductase;
tigrfam_mainrole Cellular processes;
tigrfam_name msrA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00401 evalue:1.2e-54 score:184.0 best_domain_score:183.6 name:TIGR00401;
tm_num 1;
16506 16595 signal_peptide
ID metaerg.pl|13041
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
16506 17159 transmembrane_helix
ID metaerg.pl|13042
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
topology i16524-16592o;
18534 17212 CDS
ID metaerg.pl|13043
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV03632.1 1 439 evalue:1.7e-138 qcov:99.80 identity:62.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF14015; PF18181;
pfam_desc Protein of unknown function (DUF4231); SMODS and SLOG-associating 2TM effector domain 1;
pfam_id DUF4231; SLATT_1;
pfam_target db:Pfam-A.hmm|PF14015.6 evalue:2e-14 score:53.1 best_domain_score:36.0 name:DUF4231; db:Pfam-A.hmm|PF18181.1 evalue:4.8e-28 score:96.8 best_domain_score:92.8 name:SLATT_1;
tm_num 3;
18534 17212 transmembrane_helix
ID metaerg.pl|13044
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
topology i17380-17448o17527-17595i18055-18123o;
19324 18548 CDS
ID metaerg.pl|13045
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV03631.1 1 258 evalue:2.6e-91 qcov:100.00 identity:64.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF18139; PF18171;
pfam_desc SLOG in TRPM; SLOG in TRPM, prokaryote;
pfam_id LSDAT_euk; LSDAT_prok;
pfam_target db:Pfam-A.hmm|PF18139.1 evalue:2.4e-08 score:33.0 best_domain_score:26.7 name:LSDAT_euk; db:Pfam-A.hmm|PF18171.1 evalue:2.2e-67 score:225.4 best_domain_score:225.2 name:LSDAT_prok;
20819 19530 CDS
ID metaerg.pl|13046
allgo_ids GO:0005524;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017301751.1 3 422 evalue:3.6e-170 qcov:97.90 identity:72.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF00004; PF00308; PF05673;
pfam_desc ATPase family associated with various cellular activities (AAA); Bacterial dnaA protein; Protein of unknown function (DUF815);
pfam_id AAA; Bac_DnaA; DUF815;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:6.3e-06 score:25.9 best_domain_score:24.6 name:AAA; db:Pfam-A.hmm|PF00308.18 evalue:9e-05 score:21.6 best_domain_score:13.8 name:Bac_DnaA; db:Pfam-A.hmm|PF05673.13 evalue:2.1e-100 score:334.2 best_domain_score:333.3 name:DUF815;
21191 20874 CDS
ID metaerg.pl|13047
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035994392.1 1 105 evalue:2.3e-46 qcov:100.00 identity:91.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF08855;
pfam_desc Domain of unknown function (DUF1825);
pfam_id DUF1825;
pfam_target db:Pfam-A.hmm|PF08855.10 evalue:3.4e-52 score:173.9 best_domain_score:173.8 name:DUF1825;
22036 21527 CDS
ID metaerg.pl|13048
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035984471.1 1 169 evalue:1.1e-63 qcov:100.00 identity:75.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF01724;
pfam_desc Domain of unknown function DUF29;
pfam_id DUF29;
pfam_target db:Pfam-A.hmm|PF01724.16 evalue:2.9e-07 score:30.0 best_domain_score:29.6 name:DUF29;
22271 22678 CDS
ID metaerg.pl|13049
allgo_ids GO:0043590; GO:0005737; GO:0003677;
allko_ids K09747;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073611026.1 22 135 evalue:5.2e-51 qcov:84.40 identity:94.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF02575;
pfam_desc YbaB/EbfC DNA-binding family;
pfam_id YbaB_DNA_bd;
pfam_target db:Pfam-A.hmm|PF02575.16 evalue:2.4e-28 score:97.4 best_domain_score:97.0 name:YbaB_DNA_bd;
sprot_desc Nucleoid-associated protein alr5067;
sprot_id sp|Q8YM73|Y5067_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YM73|Y5067_NOSS1 35 134 evalue:2.7e-30 qcov:74.10 identity:69.00;
tigrfam_acc TIGR00103;
tigrfam_desc DNA-binding protein, YbaB/EbfC family;
tigrfam_mainrole Unknown function;
tigrfam_name DNA_YbaB_EbfC;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00103 evalue:2.4e-28 score:97.4 best_domain_score:97.0 name:TIGR00103;
22732 23223 CDS
ID metaerg.pl|13050
allec_ids 3.1.3.48;
allgo_ids GO:0004725;
allko_ids K01104;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073611027.1 1 161 evalue:1.7e-72 qcov:98.80 identity:80.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF01451;
pfam_desc Low molecular weight phosphotyrosine protein phosphatase;
pfam_id LMWPc;
pfam_target db:Pfam-A.hmm|PF01451.21 evalue:1.3e-41 score:141.5 best_domain_score:141.3 name:LMWPc;
sprot_desc Putative low molecular weight protein-tyrosine-phosphatase slr0328;
sprot_id sp|Q55535|Y328_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55535|Y328_SYNY3 4 150 evalue:5.0e-47 qcov:90.20 identity:59.90;
23392 25053 CDS
ID metaerg.pl|13051
allgo_ids GO:0003847; GO:0016042;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_083887147.1 3 543 evalue:1.3e-185 qcov:97.80 identity:64.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF07176; PF12146; PF03403;
pfam_desc Alpha/beta hydrolase of unknown function (DUF1400); Serine aminopeptidase, S33; Platelet-activating factor acetylhydrolase, isoform II;
pfam_id DUF1400; Hydrolase_4; PAF-AH_p_II;
pfam_target db:Pfam-A.hmm|PF07176.11 evalue:5.8e-41 score:139.0 best_domain_score:138.0 name:DUF1400; db:Pfam-A.hmm|PF12146.8 evalue:2.4e-10 score:39.3 best_domain_score:31.1 name:Hydrolase_4; db:Pfam-A.hmm|PF03403.13 evalue:1.1e-11 score:43.1 best_domain_score:32.4 name:PAF-AH_p_II;
sp YES;
23392 23481 signal_peptide
ID metaerg.pl|13052
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
25159 26022 CDS
ID metaerg.pl|13053
allec_ids 5.4.99.25;
allgo_ids GO:0001522; GO:0003723; GO:0009451; GO:0009982; GO:0106029; GO:0031119;
allko_ids K03177;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO45470.1 1 283 evalue:3.1e-109 qcov:98.60 identity:71.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF09157; PF16198; PF01509;
pfam_desc Pseudouridine synthase II TruB, C-terminal; tRNA pseudouridylate synthase B C-terminal domain; TruB family pseudouridylate synthase (N terminal domain);
pfam_id TruB-C_2; TruB_C_2; TruB_N;
pfam_target db:Pfam-A.hmm|PF09157.11 evalue:4.8e-08 score:32.2 best_domain_score:30.1 name:TruB-C_2; db:Pfam-A.hmm|PF16198.5 evalue:1e-09 score:37.7 best_domain_score:35.7 name:TruB_C_2; db:Pfam-A.hmm|PF01509.18 evalue:2e-51 score:173.5 best_domain_score:173.1 name:TruB_N;
sprot_desc tRNA pseudouridine synthase B;
sprot_id sp|Q112N2|TRUB_TRIEI;
sprot_target db:uniprot_sprot|sp|Q112N2|TRUB_TRIEI 1 283 evalue:6.5e-74 qcov:98.60 identity:50.70;
tigrfam_acc TIGR00431;
tigrfam_desc tRNA pseudouridine(55) synthase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TruB;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00431 evalue:3.1e-69 score:232.0 best_domain_score:231.8 name:TIGR00431;
26713 27252 CDS
ID metaerg.pl|13054
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Calothrix;s__Calothrix sp002368395;
genomedb_acc GCF_002368395.1;
genomedb_target db:genomedb|GCF_002368395.1|WP_096625677.1 1 179 evalue:1.6e-63 qcov:100.00 identity:67.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
28985 27444 CDS
ID metaerg.pl|13055
allgo_ids GO:0006310;
allko_ids K09760;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106871653.1 9 512 evalue:1.4e-210 qcov:98.20 identity:76.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF02646;
pfam_desc RmuC family;
pfam_id RmuC;
pfam_target db:Pfam-A.hmm|PF02646.16 evalue:5.1e-99 score:330.3 best_domain_score:330.3 name:RmuC;
sprot_desc DNA recombination protein RmuC homolog;
sprot_id sp|Q9REQ3|RMUC_ZYMMO;
sprot_target db:uniprot_sprot|sp|Q9REQ3|RMUC_ZYMMO 66 487 evalue:4.7e-75 qcov:82.30 identity:40.40;
tm_num 1;
28985 27444 transmembrane_helix
ID metaerg.pl|13056
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
topology i27456-27524o;
29412 30614 CDS
ID metaerg.pl|13057
allgo_ids GO:0008168;
allko_ids K00599; K00568;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Leptolyngbyales;f__Leptolyngbyaceae;g__ULC077BIN1;s__ULC077BIN1 sp003249025;
genomedb_acc GCA_003249025.1;
genomedb_target db:genomedb|GCA_003249025.1|PZV09725.1 1 399 evalue:8.1e-185 qcov:99.80 identity:76.90;
kegg_pathway_id 00450; 00626; 00380; 00150; 00340; 00130; 00350;
kegg_pathway_name Selenoamino acid metabolism; Naphthalene and anthracene degradation; Tryptophan metabolism; Androgen and estrogen metabolism; Histidine metabolism; Ubiquinone biosynthesis; Tyrosine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF02353; PF08241; PF08242; PF00891; PF13489; PF13649; PF13847; PF05175; PF01209;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; O-methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain; ubiE/COQ5 methyltransferase family;
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_2; Methyltransf_23; Methyltransf_25; Methyltransf_31; MTS; Ubie_methyltran;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:4e-06 score:25.5 best_domain_score:24.7 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:4.2e-16 score:58.6 best_domain_score:57.8 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:2.1e-18 score:66.1 best_domain_score:64.8 name:Methyltransf_12; db:Pfam-A.hmm|PF00891.18 evalue:2.7e-05 score:22.8 best_domain_score:22.1 name:Methyltransf_2; db:Pfam-A.hmm|PF13489.6 evalue:3.4e-14 score:52.3 best_domain_score:51.5 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:2.4e-18 score:65.9 best_domain_score:64.9 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:7.1e-23 score:80.3 best_domain_score:79.7 name:Methyltransf_31; db:Pfam-A.hmm|PF05175.14 evalue:3.8e-07 score:29.0 best_domain_score:28.2 name:MTS; db:Pfam-A.hmm|PF01209.18 evalue:1.9e-07 score:29.9 best_domain_score:29.2 name:Ubie_methyltran;
sprot_desc hypothetical protein;
sprot_id sp|P08442|Y1184_SYNP6;
sprot_target db:uniprot_sprot|sp|P08442|Y1184_SYNP6 7 398 evalue:9.2e-135 qcov:98.00 identity:59.30;
31272 30691 CDS
ID metaerg.pl|13058
allec_ids 4.-.-.-;
allgo_ids GO:0017009; GO:0016829;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073606856.1 1 193 evalue:5.5e-86 qcov:100.00 identity:81.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
metacyc_pathway_id PWY1A0-6325;
metacyc_pathway_name actinorhodin biosynthesis;;
metacyc_pathway_type Antibiotic-Biosynthesis;;
pfam_acc PF09367;
pfam_desc CpeS-like protein;
pfam_id CpeS;
pfam_target db:Pfam-A.hmm|PF09367.10 evalue:6.6e-73 score:243.4 best_domain_score:243.2 name:CpeS;
sprot_desc Phycocyanobilin lyase subunit CpcS;
sprot_id sp|A8HTM2|CPCS_SYNP2;
sprot_target db:uniprot_sprot|sp|A8HTM2|CPCS_SYNP2 2 193 evalue:2.7e-71 qcov:99.50 identity:64.80;
32044 32562 CDS
ID metaerg.pl|13059
allgo_ids GO:0015979; GO:0030089; GO:0055114; GO:0018298;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106868037.1 1 172 evalue:1.1e-82 qcov:100.00 identity:94.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF00502;
pfam_desc Phycobilisome protein;
pfam_id Phycobilisome;
pfam_target db:Pfam-A.hmm|PF00502.19 evalue:9.4e-60 score:200.3 best_domain_score:200.1 name:Phycobilisome;
sprot_desc C-phycocyanin beta chain;
sprot_id sp|P72508|PHCB_ARTPT;
sprot_target db:uniprot_sprot|sp|P72508|PHCB_ARTPT 1 172 evalue:3.2e-68 qcov:100.00 identity:77.30;
tigrfam_acc TIGR01339;
tigrfam_desc phycocyanin, beta subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name phycocy_beta;
tigrfam_sub1role Photosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01339 evalue:4.6e-98 score:325.3 best_domain_score:325.2 name:TIGR01339;
32666 33154 CDS
ID metaerg.pl|13060
allgo_ids GO:0015979; GO:0030089; GO:0055114; GO:0018298;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__CCP5;s__CCP5 sp003017785;
genomedb_acc GCF_003017785.1;
genomedb_target db:genomedb|GCF_003017785.1|WP_106881694.1 1 162 evalue:1.5e-81 qcov:100.00 identity:95.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF00502;
pfam_desc Phycobilisome protein;
pfam_id Phycobilisome;
pfam_target db:Pfam-A.hmm|PF00502.19 evalue:1.1e-49 score:167.6 best_domain_score:167.4 name:Phycobilisome;
sprot_desc C-phycocyanin alpha chain;
sprot_id sp|P72509|PHCA_ARTPT;
sprot_target db:uniprot_sprot|sp|P72509|PHCA_ARTPT 1 162 evalue:4.5e-80 qcov:100.00 identity:90.70;
tigrfam_acc TIGR01338;
tigrfam_desc phycocyanin, alpha subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name phycocy_alpha;
tigrfam_sub1role Photosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01338 evalue:5.9e-92 score:305.1 best_domain_score:304.9 name:TIGR01338;
33258 34076 CDS
ID metaerg.pl|13061
allgo_ids GO:0030089; GO:0015979;
allko_ids K02286;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073606859.1 1 272 evalue:3.8e-125 qcov:100.00 identity:85.70;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF01383; PF00427;
pfam_desc CpcD/allophycocyanin linker domain; Phycobilisome Linker polypeptide;
pfam_id CpcD; PBS_linker_poly;
pfam_target db:Pfam-A.hmm|PF01383.21 evalue:1.5e-16 score:59.6 best_domain_score:58.4 name:CpcD; db:Pfam-A.hmm|PF00427.21 evalue:1.9e-50 score:169.3 best_domain_score:168.8 name:PBS_linker_poly;
sprot_desc Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod 2;
sprot_id sp|P73204|PYR2_SYNY3;
sprot_target db:uniprot_sprot|sp|P73204|PYR2_SYNY3 1 272 evalue:3.7e-87 qcov:100.00 identity:60.80;
34262 35137 CDS
ID metaerg.pl|13062
allgo_ids GO:0030089; GO:0015979;
allko_ids K02286;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035990442.1 1 291 evalue:1.2e-145 qcov:100.00 identity:90.70;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF01383; PF00427;
pfam_desc CpcD/allophycocyanin linker domain; Phycobilisome Linker polypeptide;
pfam_id CpcD; PBS_linker_poly;
pfam_target db:Pfam-A.hmm|PF01383.21 evalue:9.3e-22 score:76.3 best_domain_score:75.2 name:CpcD; db:Pfam-A.hmm|PF00427.21 evalue:2e-49 score:166.0 best_domain_score:165.5 name:PBS_linker_poly;
sprot_desc Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod;
sprot_id sp|P50034|PYR1_THEEB;
sprot_target db:uniprot_sprot|sp|P50034|PYR1_THEEB 1 289 evalue:5.6e-97 qcov:99.30 identity:65.20;
35268 35513 CDS
ID metaerg.pl|13063
allec_ids 1.18.1.2;
allgo_ids GO:0030089; GO:0004324;
allko_ids K02641;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106868041.1 1 76 evalue:8.3e-28 qcov:93.80 identity:81.60;
kegg_pathway_id 00195;
kegg_pathway_name Photosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
metacyc_pathway_id PHOTOALL-PWY; PWY-101;
metacyc_pathway_name oxygenic photosynthesis;; photosynthesis light reactions;;
metacyc_pathway_type Photosynthesis; Super-Pathways;; Electron-Transfer; Photosynthesis;;
pfam_acc PF01383;
pfam_desc CpcD/allophycocyanin linker domain;
pfam_id CpcD;
pfam_target db:Pfam-A.hmm|PF01383.21 evalue:2.2e-26 score:91.1 best_domain_score:90.9 name:CpcD;
sprot_desc Ferredoxin--NADP reductase;
sprot_id sp|P58558|FENR_NOSS1;
sprot_target db:uniprot_sprot|sp|P58558|FENR_NOSS1 1 76 evalue:2.5e-23 qcov:93.80 identity:69.70;
35558 36391 CDS
ID metaerg.pl|13064
allec_ids 4.-.-.-;
allgo_ids GO:0005515; GO:0030089; GO:0016829;
allko_ids K02288;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017300749.1 1 277 evalue:8.6e-117 qcov:100.00 identity:77.30;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
metacyc_pathway_id PWY1A0-6325;
metacyc_pathway_name actinorhodin biosynthesis;;
metacyc_pathway_type Antibiotic-Biosynthesis;;
pfam_acc PF02985; PF13646; PF13513; PF03130;
pfam_desc HEAT repeat; HEAT repeats; HEAT-like repeat; PBS lyase HEAT-like repeat;
pfam_id HEAT; HEAT_2; HEAT_EZ; HEAT_PBS;
pfam_target db:Pfam-A.hmm|PF02985.22 evalue:6e-06 score:25.3 best_domain_score:11.3 name:HEAT; db:Pfam-A.hmm|PF13646.6 evalue:2.4e-22 score:78.4 best_domain_score:44.2 name:HEAT_2; db:Pfam-A.hmm|PF13513.6 evalue:3.2e-09 score:36.4 best_domain_score:21.6 name:HEAT_EZ; db:Pfam-A.hmm|PF03130.16 evalue:2e-24 score:83.0 best_domain_score:28.0 name:HEAT_PBS;
sprot_desc Phycocyanobilin lyase subunit alpha;
sprot_id sp|P73638|CPCE_SYNY3;
sprot_target db:uniprot_sprot|sp|P73638|CPCE_SYNY3 17 277 evalue:4.6e-77 qcov:94.20 identity:64.50;
36402 37091 CDS
ID metaerg.pl|13065
allgo_ids GO:0005515; GO:0030089; GO:0016829;
allko_ids K02289;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003017855;
genomedb_acc GCF_003017855.1;
genomedb_target db:genomedb|GCF_003017855.1|WP_106868571.1 7 212 evalue:8.8e-67 qcov:90.00 identity:69.40;
kegg_pathway_id 00196;
kegg_pathway_name Photosynthesis - antenna proteins;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF02985; PF13646; PF03130;
pfam_desc HEAT repeat; HEAT repeats; PBS lyase HEAT-like repeat;
pfam_id HEAT; HEAT_2; HEAT_PBS;
pfam_target db:Pfam-A.hmm|PF02985.22 evalue:2.2e-07 score:29.8 best_domain_score:19.5 name:HEAT; db:Pfam-A.hmm|PF13646.6 evalue:4.4e-18 score:64.7 best_domain_score:32.1 name:HEAT_2; db:Pfam-A.hmm|PF03130.16 evalue:4.7e-13 score:47.7 best_domain_score:18.5 name:HEAT_PBS;
sprot_desc Phycocyanin alpha phycocyanobilin lyase CpcF;
sprot_id sp|P72652|CPCF_SYNY3;
sprot_target db:uniprot_sprot|sp|P72652|CPCF_SYNY3 8 175 evalue:3.0e-45 qcov:73.40 identity:60.10;
37317 38057 CDS
ID metaerg.pl|13066
allec_ids 2.4.1.180; 2.4.1.-;
allgo_ids GO:0009058; GO:0047241; GO:0009246;
allko_ids K02852;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035990451.1 1 245 evalue:1.9e-120 qcov:99.60 identity:82.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
metacyc_pathway_id PWY-5313; PWY-5793; PWY-2901; PWY-5397; PWY-5380; PWY-6404; PWY-5268; PWY-881; PWY-83; PWY-5379; PWY-5784; PWY-5284; PWY-5272; ECASYN-PWY; PWY-5399; PWY-5342; PWY-5405; PWY-5307; PWY-2881; PWY-5343; PWY-5338; PWY-6297; PWY-5400; PWY-5672; PWY-5797; PWY-2021; PWY-5926; PWY-5339; PWY-5398; PWY-5774; PWY-5759; PWY-5286; PWY-5756; PWY-5160; PWY-5139; PWY-5800; PWY-5161; PWY-6397; PWY-4421; PWY-5666;
metacyc_pathway_name superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; maysin biosynthesis;; cytokinins 9-N-glucoside biosynthesis;; crocetin biosynthesis;; A series fagopyritols biosynthesis;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; salvianin biosynthesis;; trehalose biosynthesis II;; monolignol glucosides biosynthesis;; B series fagopyritols biosynthesis;; indole-3-acetate inactivation VIII;; shisonin biosynthesis;; abscisic acid degradation by glucosylation;; enterobacterial common antigen biosynthesis;; betacyanin biosynthesis;; ajugose biosynthesis I (galactinol-dependent);; superpathway of betalain biosynthesis;; gentiodelphin biosynthesis;; cytokinins 7-N-glucoside biosynthesis;; ajugose biosynthesis II (galactinol-independent);; galactosylcyclitol biosynthesis;; tuberonate glucoside biosynthesis;; amaranthin biosynthesis;; ginsenosides biosynthesis;; indole-3-acetate inactivation VI;; indole-3-acetate inactivation IV;; afrormosin conjugates interconversion;; chalcone 2'-O-glucoside biosynthesis;; crocetin esters biosynthesis;; saponin biosynthesis IV;; saponin biosynthesis III;; anthocyanidin sophoroside metabolism;; saponin biosynthesis II;; rose anthocyanin biosynthesis I (via cyanidin 5-O-β-D-glucoside);; pelargonidin conjugates biosynthesis;; xylan biosynthesis;; 6'-deoxychalcone metabolism;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; curcumin glucoside biosynthesis;; α-solanine/α-chaconine biosynthesis;;
metacyc_pathway_type ANTHOCYANIN-SYN; Super-Pathways;; FLAVONE-SYN;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; APOCAROTENOID-SYN;; CYCLITOLS-DEG; SUGAR-DERIVS;; Cell-Wall-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; Trehalose-biosynthesis;; LIGNIN-SYN; Metabolic-Clusters;; CYCLITOLS-DEG; SUGAR-DERIVS;; Indole-3-Acetate-Inactivation;; ANTHOCYANIN-SYN;; Abscisic-Acid-Degradation; Interconversion;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; BETALAIN-ALKALOIDS;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; BETALAIN-ALKALOIDS; Super-Pathways;; ANTHOCYANIN-SYN;; CYTOKININ-BIOSYNTHESIS; Metabolic-Clusters;; Glycan-Pathways; Oligosaccharides-Biosynthesis;; Cyclitols-Biosynthesis;; Inactivation;; BETALAIN-ALKALOIDS;; TRITERPENOID-SYN;; Indole-3-Acetate-Inactivation;; Indole-3-Acetate-Inactivation;; ISOFLAVONOID-SYN; Interconversion;; CHALCONE-SYN;; APOCAROTENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN; Metabolic-Clusters;; TRITERPENOID-SYN;; ANTHOCYANIN-SYN;; ANTHOCYANIN-SYN;; SECONDARY-CELL-WALL;; CHALCONE-SYN;; Cell-Wall-Biosynthesis;; PHENYLPROPANOID-SYN; POLYKETIDE-SYN;; ALKALOIDS-SYN;;
pfam_acc PF03808;
pfam_desc Glycosyl transferase WecB/TagA/CpsF family;
pfam_id Glyco_tran_WecB;
pfam_target db:Pfam-A.hmm|PF03808.13 evalue:3.1e-58 score:195.6 best_domain_score:195.3 name:Glyco_tran_WecB;
sprot_desc UDP-N-acetyl-D-mannosaminuronic acid transferase;
sprot_id sp|Q8Z397|WECG_SALTI;
sprot_target db:uniprot_sprot|sp|Q8Z397|WECG_SALTI 41 237 evalue:6.0e-28 qcov:80.10 identity:35.30;
tigrfam_acc TIGR00696;
tigrfam_desc glycosyltransferase, WecB/TagA/CpsF family;
tigrfam_mainrole Cell envelope;
tigrfam_name wecG_tagA_cpsF;
tigrfam_sub1role Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00696 evalue:2.7e-58 score:195.8 best_domain_score:195.5 name:TIGR00696;
38865 38107 CDS
ID metaerg.pl|13067
allgo_ids GO:0003677;
allko_ids K06206;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035990456.1 1 242 evalue:1.6e-114 qcov:96.00 identity:80.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF03749; PF17746;
pfam_desc Sugar fermentation stimulation protein RE domain; SfsA N-terminal OB domain;
pfam_id SfsA; SfsA_N;
pfam_target db:Pfam-A.hmm|PF03749.13 evalue:4.2e-44 score:149.0 best_domain_score:148.7 name:SfsA; db:Pfam-A.hmm|PF17746.1 evalue:7.3e-22 score:76.6 best_domain_score:75.9 name:SfsA_N;
sprot_desc Sugar fermentation stimulation protein homolog;
sprot_id sp|Q3M3I0|SFSA_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M3I0|SFSA_ANAVT 5 242 evalue:2.5e-98 qcov:94.40 identity:68.10;
tigrfam_acc TIGR00230;
tigrfam_desc sugar fermentation stimulation protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sfsA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00230 evalue:3.4e-76 score:254.8 best_domain_score:254.6 name:TIGR00230;
41296 38984 CDS
ID metaerg.pl|13068
allec_ids 3.1.-.-;
allgo_ids GO:0003676;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_052050702.1 1 767 evalue:1.1e-289 qcov:99.60 identity:67.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
metacyc_pathway_id PWY-1921;
metacyc_pathway_name indole-3-acetate activation II;;
metacyc_pathway_type Activation;;
pfam_acc PF01368; PF02272; PF17768;
pfam_desc DHH family; DHHA1 domain; RecJ OB domain;
pfam_id DHH; DHHA1; RecJ_OB;
pfam_target db:Pfam-A.hmm|PF01368.20 evalue:1.3e-08 score:34.2 best_domain_score:33.3 name:DHH; db:Pfam-A.hmm|PF02272.19 evalue:1.6e-13 score:50.5 best_domain_score:48.1 name:DHHA1; db:Pfam-A.hmm|PF17768.1 evalue:4.7e-10 score:38.9 best_domain_score:38.0 name:RecJ_OB;
tigrfam_acc TIGR00644;
tigrfam_desc single-stranded-DNA-specific exonuclease RecJ;
tigrfam_mainrole DNA metabolism;
tigrfam_name recJ;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00644 evalue:8.7e-128 score:426.1 best_domain_score:425.6 name:TIGR00644;
41453 42541 CDS
ID metaerg.pl|13069
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO40761.1 1 362 evalue:6.8e-122 qcov:100.00 identity:60.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
tm_num 1;
41453 42541 transmembrane_helix
ID metaerg.pl|13070
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
topology i41549-41608o;
42641 44155 CDS
ID metaerg.pl|13071
allgo_ids GO:0009190; GO:0016849; GO:0035556;
allko_ids K07675; K07717; K08048; K13937; K07647; K07680; K12323; K10125; K11357; K04757; K07769; K12767; K02486; K13761; K11383; K00034; K07644; K07709; K06379; K07676; K12321; K10681; K08044; K07650; K01769; K12320; K10715; K07678; K11527; K02030; K08043; K07636; K07638; K07653; K02480; K02482; K01768; K07710; K07716; K05345; K02489; K01057; K10916; K07674; K08479; K08047; K03388; K02668; K08042; K02491; K11231; K08049; K01937; K08282; K08046; K07704; K00036; K07645; K07708; K07677; K04486; K11640; K11356; K02484; K00760; K07642; K08041; K11711; K07718; K07651; K08045; K07648; K07679; K02478; K00873; K07711; K12318; K12319; K08884; K12324; K07768; K02575; K04427; K07778; K07683; K11354; K07652; K07639; K11265; K08475; K01120; K07673; K07641; K07646; K07637; K03407; K07682; K07777; K07654;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017300743.1 1 494 evalue:1.1e-226 qcov:98.00 identity:81.20;
kegg_pathway_id 04020; 04310; 00240; 00480; 00030; 00983; 00790; 00620; 00230; 05111; 00710; 00010; 00340; 04010; 04011; 02020; 03090;
kegg_pathway_name Calcium signaling pathway; Wnt signaling pathway; Pyrimidine metabolism; Glutathione metabolism; Pentose phosphate pathway; Drug metabolism - other enzymes; Folate biosynthesis; Pyruvate metabolism; Purine metabolism; Vibrio cholerae pathogenic cycle; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Histidine metabolism; MAPK signaling pathway; MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF00211; PF00989; PF13188; PF13426; PF00072;
pfam_desc Adenylate and Guanylate cyclase catalytic domain; PAS fold; PAS domain; PAS domain; Response regulator receiver domain;
pfam_id Guanylate_cyc; PAS; PAS_8; PAS_9; Response_reg;
pfam_target db:Pfam-A.hmm|PF00211.20 evalue:3.8e-64 score:214.9 best_domain_score:214.4 name:Guanylate_cyc; db:Pfam-A.hmm|PF00989.25 evalue:2.6e-08 score:33.1 best_domain_score:31.0 name:PAS; db:Pfam-A.hmm|PF13188.7 evalue:3.4e-06 score:26.2 best_domain_score:24.7 name:PAS_8; db:Pfam-A.hmm|PF13426.7 evalue:1.6e-10 score:40.4 best_domain_score:38.7 name:PAS_9; db:Pfam-A.hmm|PF00072.24 evalue:1.6e-26 score:91.9 best_domain_score:91.0 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:2.2e-18 score:65.8 best_domain_score:64.0 name:TIGR00229;
44322 45383 CDS
ID metaerg.pl|13072
allec_ids 1.3.1.-;
allgo_ids GO:0008033; GO:0017150; GO:0050660; GO:0055114; GO:0000049;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003249105;
genomedb_acc GCA_003249105.1;
genomedb_target db:genomedb|GCA_003249105.1|PZV07157.1 11 347 evalue:6.5e-162 qcov:95.50 identity:84.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
metacyc_pathway_id PWY5F9-3233; PWY-5729; PWY-5367; PWY-3461; PWY-5972; PWY-5466; HCAMHPDEG-PWY; PWY-3481; PWY-5393; PWY1A0-6325; PWY-6088; PWY-5863; PWY-5064; PWY-5063;
metacyc_pathway_name phthalate degradation (aerobic);; vestitol and sativan biosynthesis;; petroselinate biosynthesis;; L-tyrosine biosynthesis II;; stearate biosynthesis I (animals and fungi);; matairesinol biosynthesis;; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; raspberry ketone biosynthesis;; actinorhodin biosynthesis;; 3-chlorobenzoate degradation I (via chlorocatechol);; superpathway of phylloquinol biosynthesis;; chlorophyll a biosynthesis II;; phytyl diphosphate biosynthesis;;
metacyc_pathway_type AROMATIC-COMPOUNDS-DEGRADATION;; ISOFLAVONOID-SYN;; Unsaturated-Fatty-Acids-Biosynthesis;; TYROSINE-SYN;; Stearate-Biosynthesis;; LIGNAN-SYN;; Phenolic-Compounds-Degradation;; Amino-Acid-Biosynthesis; Super-Pathways;; POLYKETIDE-SYN;; Antibiotic-Biosynthesis;; 3-Chlorobenzoate-Degradation;; Phylloquinone-Biosynthesis; Super-Pathways;; Chlorophyll-a-Biosynthesis;; Phytyl-Diphosphate-Biosynthesis;;
pfam_acc PF01207;
pfam_desc Dihydrouridine synthase (Dus);
pfam_id Dus;
pfam_target db:Pfam-A.hmm|PF01207.17 evalue:7.3e-104 score:346.4 best_domain_score:346.0 name:Dus;
sprot_desc Probable tRNA-dihydrouridine synthase 1;
sprot_id sp|Q55724|DUS1_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55724|DUS1_SYNY3 25 341 evalue:1.1e-134 qcov:89.80 identity:73.50;
tigrfam_acc TIGR00737;
tigrfam_desc putative TIM-barrel protein, nifR3 family;
tigrfam_mainrole Unknown function;
tigrfam_name nifR3_yhdG;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00737 evalue:2.3e-124 score:413.9 best_domain_score:413.7 name:TIGR00737;
45499 46146 CDS
ID metaerg.pl|13073
allgo_ids GO:0016021; GO:0042651;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035990464.1 1 215 evalue:1.8e-109 qcov:100.00 identity:93.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF11780;
pfam_desc Protein of unknown function (DUF3318);
pfam_id DUF3318;
pfam_target db:Pfam-A.hmm|PF11780.8 evalue:4.1e-40 score:136.3 best_domain_score:135.5 name:DUF3318;
sprot_desc Thylakoid membrane protein slr1949;
sprot_id sp|P74511|Y1949_SYNY3;
sprot_target db:uniprot_sprot|sp|P74511|Y1949_SYNY3 1 205 evalue:1.8e-84 qcov:95.30 identity:73.90;
tm_num 2;
45499 46146 transmembrane_helix
ID metaerg.pl|13074
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
topology i45763-45822o45832-45885i;
46996 46448 CDS
ID metaerg.pl|13075
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp000763385;
genomedb_acc GCF_000763385.1;
genomedb_target db:genomedb|GCF_000763385.1|WP_035986479.1 1 178 evalue:1.3e-81 qcov:97.80 identity:91.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF10719;
pfam_desc Late competence development protein ComFB;
pfam_id ComFB;
pfam_target db:Pfam-A.hmm|PF10719.9 evalue:9.7e-23 score:79.3 best_domain_score:78.3 name:ComFB;
47409 47200 CDS
ID metaerg.pl|13076
allgo_ids GO:0003723; GO:0006355;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017300002.1 1 69 evalue:7.1e-28 qcov:100.00 identity:82.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 1783.23; 587.087; 282.943; 15.0271; 898.169;
pfam_acc PF17209;
pfam_desc Hfq protein;
pfam_id Hfq;
pfam_target db:Pfam-A.hmm|PF17209.3 evalue:4.6e-05 score:22.2 best_domain_score:21.9 name:Hfq;
>Feature NODE_628_length_39243_cov_20.7514
331 2169 CDS
ID metaerg.pl|13077
allgo_ids GO:0019867;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479803.1 34 612 evalue:2.2e-250 qcov:94.60 identity:74.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
pfam_acc PF01103; PF07244;
pfam_desc Surface antigen; Surface antigen variable number repeat;
pfam_id Bac_surface_Ag; POTRA;
pfam_target db:Pfam-A.hmm|PF01103.23 evalue:9.3e-38 score:129.7 best_domain_score:129.3 name:Bac_surface_Ag; db:Pfam-A.hmm|PF07244.15 evalue:6e-05 score:22.8 best_domain_score:21.0 name:POTRA;
sp YES;
tm_num 1;
331 441 signal_peptide
ID metaerg.pl|13078
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
331 2169 transmembrane_helix
ID metaerg.pl|13079
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
topology i376-444o;
2169 6026 CDS
ID metaerg.pl|13080
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479804.1 3 1285 evalue:0.0e+00 qcov:99.80 identity:67.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
pfam_acc PF04357;
pfam_desc TamB, inner membrane protein subunit of TAM complex;
pfam_id TamB;
pfam_target db:Pfam-A.hmm|PF04357.13 evalue:5.1e-55 score:186.5 best_domain_score:186.5 name:TamB;
sp YES;
tm_num 1;
2169 2240 signal_peptide
ID metaerg.pl|13081
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
2169 6026 transmembrane_helix
ID metaerg.pl|13082
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
topology i2181-2249o;
6039 6797 CDS
ID metaerg.pl|13083
allec_ids 1.1.1.-;
allgo_ids GO:0016491;
allko_ids K00022; K12420;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481906.1 3 252 evalue:3.9e-108 qcov:99.20 identity:79.20;
kegg_pathway_id 00062; 00071; 00650; 00310; 00280; 00281; 00930; 00380;
kegg_pathway_name Fatty acid elongation in mitochondria; Fatty acid metabolism; Butanoate metabolism; Lysine degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Caprolactam degradation; Tryptophan metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
metacyc_pathway_id PWY-5195; PWY-5466; PWY-5972; PWY-6575; PWY-5197; BENZCOA-PWY; PWY-5184; PWY-6501; PWY-5516; PWY-5392; P302-PWY; PWY-1186; SUCROSEUTIL2-PWY; PWY-6419; PWY1A0-6325; PWY-6516; PWY-321; CENTBENZCOA-PWY; 4TOLCARBDEG-PWY; LYSDEGII-PWY; PWY-6577; PWY-5048; ECASYN-PWY; TOLSULFDEG-PWY; PWY-481; PWY-5789; PWY-5327; PWY-882;
metacyc_pathway_name artemisinin and arteannuin B biosynthesis;; matairesinol biosynthesis;; stearate biosynthesis I (animals and fungi);; juvenile hormone III biosynthesis I;; lactate biosynthesis (archaea);; anaerobic aromatic compound degradation (Thauera aromatica);; toluene degradation VI (anaerobic);; D-glucuronate degradation II;; D-xylose degradation II;; reductive TCA cycle II;; L-sorbose degradation;; L-homomethionine biosynthesis;; sucrose degradation VII (sucrose 3-dehydrogenase);; shikimate degradation II;; actinorhodin biosynthesis;; superpathway of microbial D-galacturonate and D-glucuronate degradation;; cutin biosynthesis;; benzoyl-CoA degradation II (anaerobic);; 4-toluenecarboxylate degradation;; L-lysine degradation III;; farnesylcysteine salvage pathway;; rosmarinic acid biosynthesis I;; enterobacterial common antigen biosynthesis;; 4-toluenesulfonate degradation I;; ethylbenzene degradation (anaerobic);; 3-hydroxypropanoate/4-hydroxybutanate cycle;; superpathway of L-lysine degradation;; L-ascorbate biosynthesis I (L-galactose pathway);;
metacyc_pathway_type SESQUITERPENE-LACTONE;; LIGNAN-SYN;; Stearate-Biosynthesis;; HORMONE-SYN; JH-III-Biosynthesis;; Energy-Metabolism;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; D-Glucuronate-Degradation;; Xylose-Degradation;; Reductive-TCA-Cycles;; Sugars-And-Polysaccharides-Degradation;; Other-Amino-Acid-Biosynthesis;; SUCROSE-DEG;; Shikimate-Degradation;; Antibiotic-Biosynthesis;; Sugar-Derivatives; Super-Pathways;; EPIDERMAL-STRUCTURE; Lipid-Biosynthesis;; Benzoyl-CoA-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; LYSINE-DEG;; All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Rosmarinate-Biosynthesis;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; 4-Toluenesulfonate-Degradation;; AROMATIC-COMPOUNDS-DEGRADATION;; Autotrophic-CO2-Fixation;; LYSINE-DEG; Super-Pathways;; Ascorbate-Biosynthesis;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:3.9e-55 score:185.6 best_domain_score:185.3 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.6e-43 score:147.5 best_domain_score:147.2 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:1.9e-07 score:30.4 best_domain_score:28.9 name:KR;
sprot_desc Short chain dehydrogenase mpl6;
sprot_id sp|A0A144Y7G4|CITE_MONPU;
sprot_target db:uniprot_sprot|sp|A0A144Y7G4|CITE_MONPU 9 242 evalue:1.2e-23 qcov:92.90 identity:34.70;
6794 7438 CDS
ID metaerg.pl|13084
allec_ids 4.2.1.116;
allgo_ids GO:0003824; GO:0043956; GO:0006631;
allko_ids K13767; K15016; K01782; K07516; K01692; K00022; K10527; K01825; K07515; K07514; K15019;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__HLUCCA08;s__HLUCCA08 sp001314655;
genomedb_acc GCA_001314655.1;
genomedb_target db:genomedb|GCA_001314655.1|KPP93068.1 1 203 evalue:2.4e-66 qcov:94.90 identity:70.40;
kegg_pathway_id 00062; 00903; 01040; 00071; 00592; 00410; 00650; 00640; 00310; 00281; 00280; 00632; 00930; 00380;
kegg_pathway_name Fatty acid elongation in mitochondria; Limonene and pinene degradation; Biosynthesis of unsaturated fatty acids; Fatty acid metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Butanoate metabolism; Propanoate metabolism; Lysine degradation; Geraniol degradation; Valine, leucine and isoleucine degradation; Benzoate degradation via CoA ligation; Caprolactam degradation; Tryptophan metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
metacyc_pathway_id PWY-5743; PWY-3941; PWY-4221; PWY-5789;
metacyc_pathway_name 3-hydroxypropanoate cycle;; β-alanine biosynthesis II;; superpathway of coenzyme A biosynthesis II (plants);; 3-hydroxypropanoate/4-hydroxybutanate cycle;;
metacyc_pathway_type Autotrophic-CO2-Fixation;; Beta-Alanine-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;; Autotrophic-CO2-Fixation;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:1e-32 score:112.6 best_domain_score:112.3 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:4.8e-17 score:61.7 best_domain_score:61.4 name:ECH_2;
sprot_desc 3-hydroxypropionyl-coenzyme A dehydratase;
sprot_id sp|A4YI89|HPCD_METS5;
sprot_target db:uniprot_sprot|sp|A4YI89|HPCD_METS5 2 203 evalue:2.6e-19 qcov:94.40 identity:31.10;
7452 7802 CDS
ID metaerg.pl|13085
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479806.1 8 116 evalue:1.7e-18 qcov:94.00 identity:50.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
sp YES;
tm_num 1;
7452 7532 signal_peptide
ID metaerg.pl|13086
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
7452 7802 transmembrane_helix
ID metaerg.pl|13087
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
topology i7464-7532o;
7839 8333 CDS
ID metaerg.pl|13088
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481907.1 1 164 evalue:1.8e-45 qcov:100.00 identity:60.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
pfam_acc PF04314;
pfam_desc Copper chaperone PCu(A)C;
pfam_id PCuAC;
pfam_target db:Pfam-A.hmm|PF04314.13 evalue:1.3e-35 score:120.8 best_domain_score:120.4 name:PCuAC;
sp YES;
tm_num 1;
7839 7898 signal_peptide
ID metaerg.pl|13089
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
7839 8333 transmembrane_helix
ID metaerg.pl|13090
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
topology i7851-7919o;
8819 8430 CDS
ID metaerg.pl|13091
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794964.1 26 128 evalue:2.9e-35 qcov:79.80 identity:77.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
sp YES;
tm_num 1;
8430 8576 signal_peptide
ID metaerg.pl|13092
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
8819 8430 transmembrane_helix
ID metaerg.pl|13093
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
topology i8514-8582o;
9700 9026 CDS
ID metaerg.pl|13094
allec_ids 2.7.8.7;
allgo_ids GO:0000287; GO:0008897; GO:0009366; GO:0009239;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794965.1 1 223 evalue:4.0e-88 qcov:99.60 identity:71.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
metacyc_pathway_id PWY-6012;
metacyc_pathway_name acyl carrier protein metabolism;;
metacyc_pathway_type Cofactor-Biosynthesis; Interconversion;;
pfam_acc PF17837; PF01648;
pfam_desc 4'-phosphopantetheinyl transferase N-terminal domain; 4'-phosphopantetheinyl transferase superfamily;
pfam_id 4PPT_N; ACPS;
pfam_target db:Pfam-A.hmm|PF17837.1 evalue:2.5e-21 score:74.8 best_domain_score:74.0 name:4PPT_N; db:Pfam-A.hmm|PF01648.20 evalue:2.1e-11 score:43.2 best_domain_score:42.6 name:ACPS;
sprot_desc 4'-phosphopantetheinyl transferase Npt;
sprot_id sp|A1YCA5|PPTAS_NOCIO;
sprot_target db:uniprot_sprot|sp|A1YCA5|PPTAS_NOCIO 49 221 evalue:1.4e-18 qcov:77.20 identity:35.10;
14211 9697 CDS
ID metaerg.pl|13095
allec_ids 1.-.-.-;
allgo_ids GO:0003824;
allko_ids K01904; K01909; K01895; K01652; K01897; K13356; K03367; K00143; K01776; K05939; K01586; K01779; K01912; K02364; K00992;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794966.1 1 1504 evalue:0.0e+00 qcov:100.00 identity:72.70;
kegg_pathway_id 00720; 00940; 00620; 00300; 00640; 00650; 00290; 00564; 00010; 00310; 01053; 00770; 00251; 00252; 00473; 00360; 00071; 00471; 00660;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Phenylpropanoid biosynthesis; Pyruvate metabolism; Lysine biosynthesis; Propanoate metabolism; Butanoate metabolism; Valine, leucine and isoleucine biosynthesis; Glycerophospholipid metabolism; Glycolysis / Gluconeogenesis; Lysine degradation; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Glutamate metabolism; Alanine and aspartate metabolism; D-Alanine metabolism; Phenylalanine metabolism; Fatty acid metabolism; D-Glutamine and D-glutamate metabolism; C5-Branched dibasic acid metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
metacyc_pathway_id PWY-2821; PWY-5826; PWY-5271; PWY-4302; PWYG-321; PWY-6113; PWY-5479; PWY-5987; PWY-5469;
metacyc_pathway_name glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; abscisic acid degradation to phaseic acid;; aerobic respiration III (alternative oxidase pathway);; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; sesamin biosynthesis;;
metacyc_pathway_type GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Abscisic-Acid-Degradation;; AEROBIC-RESPIRATION; Electron-Transfer;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;;
pfam_acc PF00501; PF13193; PF00296; PF02911; PF00551; PF00550;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain; Luciferase-like monooxygenase; Formyl transferase, C-terminal domain; Formyl transferase; Phosphopantetheine attachment site;
pfam_id AMP-binding; AMP-binding_C; Bac_luciferase; Formyl_trans_C; Formyl_trans_N; PP-binding;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:1.1e-104 score:349.6 best_domain_score:190.8 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:6.2e-08 score:32.8 best_domain_score:29.2 name:AMP-binding_C; db:Pfam-A.hmm|PF00296.20 evalue:6e-44 score:150.0 best_domain_score:150.0 name:Bac_luciferase; db:Pfam-A.hmm|PF02911.18 evalue:1.4e-05 score:24.5 best_domain_score:22.7 name:Formyl_trans_C; db:Pfam-A.hmm|PF00551.19 evalue:1e-17 score:63.7 best_domain_score:62.7 name:Formyl_trans_N; db:Pfam-A.hmm|PF00550.25 evalue:5e-11 score:42.0 best_domain_score:40.7 name:PP-binding;
tigrfam_acc TIGR01733; TIGR04020;
tigrfam_desc amino acid adenylation domain; natural product biosynthesis luciferase-like monooxygenase domain;
tigrfam_name AA-adenyl-dom; seco_metab_LLM;
tigrfam_target db:TIGRFAMs.hmm|TIGR01733 evalue:6.4e-130 score:432.8 best_domain_score:232.4 name:TIGR01733; db:TIGRFAMs.hmm|TIGR04020 evalue:9.8e-144 score:477.8 best_domain_score:477.4 name:TIGR04020;
15200 14208 CDS
ID metaerg.pl|13096
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794967.1 1 318 evalue:9.5e-131 qcov:96.40 identity:72.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
pfam_acc PF00535; PF13641; PF13632;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family group 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3; Glyco_trans_2_3;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:1.2e-10 score:40.7 best_domain_score:40.0 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:1.2e-10 score:40.9 best_domain_score:40.3 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13632.6 evalue:3.8e-07 score:29.4 best_domain_score:28.2 name:Glyco_trans_2_3;
tm_num 1;
15200 14208 transmembrane_helix
ID metaerg.pl|13097
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
topology o15003-15056i;
21526 15197 CDS
ID metaerg.pl|13098
allgo_ids GO:0009058; GO:0016788;
allko_ids K01652; K01776; K00143; K03367; K02364; K00992; K01779;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794968.1 9 2109 evalue:0.0e+00 qcov:99.60 identity:81.10;
kegg_pathway_id 00300; 00650; 00660; 00471; 00252; 00251; 00473; 01053; 00770; 00290; 00310;
kegg_pathway_name Lysine biosynthesis; Butanoate metabolism; C5-Branched dibasic acid metabolism; D-Glutamine and D-glutamate metabolism; Alanine and aspartate metabolism; Glutamate metabolism; D-Alanine metabolism; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine biosynthesis; Lysine degradation;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
pfam_acc PF00698; PF16197; PF00109; PF02801; PF08659; PF00550; PF14765; PF00975;
pfam_desc Acyl transferase domain; Ketoacyl-synthetase C-terminal extension; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; KR domain; Phosphopantetheine attachment site; Polyketide synthase dehydratase; Thioesterase domain;
pfam_id Acyl_transf_1; KAsynt_C_assoc; ketoacyl-synt; Ketoacyl-synt_C; KR; PP-binding; PS-DH; Thioesterase;
pfam_target db:Pfam-A.hmm|PF00698.21 evalue:9.3e-40 score:136.3 best_domain_score:135.6 name:Acyl_transf_1; db:Pfam-A.hmm|PF16197.5 evalue:2e-18 score:66.1 best_domain_score:65.2 name:KAsynt_C_assoc; db:Pfam-A.hmm|PF00109.26 evalue:5e-69 score:231.9 best_domain_score:231.2 name:ketoacyl-synt; db:Pfam-A.hmm|PF02801.22 evalue:4.2e-40 score:135.7 best_domain_score:134.0 name:Ketoacyl-synt_C; db:Pfam-A.hmm|PF08659.10 evalue:3.1e-42 score:143.8 best_domain_score:142.9 name:KR; db:Pfam-A.hmm|PF00550.25 evalue:1.1e-15 score:57.0 best_domain_score:54.6 name:PP-binding; db:Pfam-A.hmm|PF14765.6 evalue:2.9e-39 score:134.3 best_domain_score:133.3 name:PS-DH; db:Pfam-A.hmm|PF00975.20 evalue:1.4e-21 score:76.9 best_domain_score:74.5 name:Thioesterase;
23028 21523 CDS
ID metaerg.pl|13099
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794969.1 1 485 evalue:6.6e-168 qcov:96.80 identity:62.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
tm_num 11;
23028 21523 transmembrane_helix
ID metaerg.pl|13100
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
topology o21532-21585i21604-21657o21700-21753i21772-21831o21937-21996i22015-22083o22168-22236i22273-22341o22384-22437i22675-22743o22810-22878i;
24327 23044 CDS
ID metaerg.pl|13101
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794970.1 1 426 evalue:6.8e-121 qcov:99.80 identity:57.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
sp YES;
tm_num 3;
23044 23151 signal_peptide
ID metaerg.pl|13102
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
24327 23044 transmembrane_helix
ID metaerg.pl|13103
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
topology i23080-23148o24076-24144i24253-24321o;
25233 24361 CDS
ID metaerg.pl|13104
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794971.1 1 287 evalue:1.3e-62 qcov:99.00 identity:52.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
25508 28021 CDS
ID metaerg.pl|13105
allec_ids 3.6.4.13; 3.6.4.-;
allgo_ids GO:0003676; GO:0005524; GO:0008026;
allko_ids K03579; K13185; K14442; K01509; K13184; K03578; K12820; K12815; K13117; K12818; K12813; K12814;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468170.1 28 835 evalue:0.0e+00 qcov:96.50 identity:76.40;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
pfam_acc PF00270; PF04408; PF00271; PF08482;
pfam_desc DEAD/DEAH box helicase; Helicase associated domain (HA2); Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal;
pfam_id DEAD; HA2; Helicase_C; HrpB_C;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:1.2e-08 score:34.2 best_domain_score:33.3 name:DEAD; db:Pfam-A.hmm|PF04408.23 evalue:3.1e-09 score:36.3 best_domain_score:35.1 name:HA2; db:Pfam-A.hmm|PF00271.31 evalue:2.2e-11 score:43.3 best_domain_score:42.4 name:Helicase_C; db:Pfam-A.hmm|PF08482.10 evalue:1.6e-47 score:160.4 best_domain_score:157.3 name:HrpB_C;
sprot_desc ATP-dependent RNA helicase HrpB;
sprot_id sp|P37024|HRPB_ECOLI;
sprot_target db:uniprot_sprot|sp|P37024|HRPB_ECOLI 34 833 evalue:2.1e-149 qcov:95.60 identity:42.00;
tigrfam_acc TIGR01970;
tigrfam_desc ATP-dependent helicase HrpB;
tigrfam_mainrole Unknown function;
tigrfam_name DEAH_box_HrpB;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01970 evalue:1e-268 score:893.2 best_domain_score:893.1 name:TIGR01970;
28915 28088 CDS
ID metaerg.pl|13106
allec_ids 3.4.14.13;
allgo_ids GO:0008234; GO:0016998; GO:0071555;
allko_ids K20742;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480025.1 5 275 evalue:2.1e-107 qcov:98.50 identity:68.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
pfam_acc PF00877; PF18348;
pfam_desc NlpC/P60 family; Bacterial dipeptidyl-peptidase Sh3 domain;
pfam_id NLPC_P60; SH3_16;
pfam_target db:Pfam-A.hmm|PF00877.19 evalue:8.9e-12 score:44.2 best_domain_score:43.5 name:NLPC_P60; db:Pfam-A.hmm|PF18348.1 evalue:2.3e-10 score:39.3 best_domain_score:39.3 name:SH3_16;
sprot_desc Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase;
sprot_id sp|O35010|YKFC_BACSU;
sprot_target db:uniprot_sprot|sp|O35010|YKFC_BACSU 55 260 evalue:1.5e-06 qcov:74.90 identity:25.80;
30321 28912 CDS
ID metaerg.pl|13107
allec_ids 3.4.11.1;
allgo_ids GO:0004177; GO:0005622; GO:0006508; GO:0005737; GO:0030145; GO:0008235;
allko_ids K01259; K01255; K11142;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794908.1 13 469 evalue:1.7e-173 qcov:97.40 identity:68.30;
kegg_pathway_id 00480; 00330;
kegg_pathway_name Glutathione metabolism; Arginine and proline metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
metacyc_pathway_id PWY-6018; PWY-5988;
metacyc_pathway_name ; ;
metacyc_pathway_type ; ;
pfam_acc PF00883;
pfam_desc Cytosol aminopeptidase family, catalytic domain;
pfam_id Peptidase_M17;
pfam_target db:Pfam-A.hmm|PF00883.21 evalue:3.4e-100 score:334.6 best_domain_score:333.8 name:Peptidase_M17;
sprot_desc Probable cytosol aminopeptidase;
sprot_id sp|Q0I816|AMPA_SYNS3;
sprot_target db:uniprot_sprot|sp|Q0I816|AMPA_SYNS3 31 459 evalue:6.9e-57 qcov:91.50 identity:36.50;
30817 30404 CDS
ID metaerg.pl|13108
allgo_ids GO:0004683; GO:0005516; GO:0006468;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468173.1 2 129 evalue:1.2e-34 qcov:93.40 identity:57.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
pfam_acc PF08332; PF11533; PF14534; PF13474; PF13577;
pfam_desc Calcium/calmodulin dependent protein kinase II association domain; Protein of unknown function (DUF3225); Domain of unknown function (DUF4440); SnoaL-like domain; SnoaL-like domain;
pfam_id CaMKII_AD; DUF3225; DUF4440; SnoaL_3; SnoaL_4;
pfam_target db:Pfam-A.hmm|PF08332.10 evalue:3.4e-20 score:71.7 best_domain_score:71.5 name:CaMKII_AD; db:Pfam-A.hmm|PF11533.8 evalue:3.2e-05 score:22.9 best_domain_score:22.4 name:DUF3225; db:Pfam-A.hmm|PF14534.6 evalue:5.4e-17 score:61.4 best_domain_score:61.2 name:DUF4440; db:Pfam-A.hmm|PF13474.6 evalue:2.3e-10 score:40.0 best_domain_score:39.6 name:SnoaL_3; db:Pfam-A.hmm|PF13577.6 evalue:7.6e-07 score:28.5 best_domain_score:26.4 name:SnoaL_4;
tigrfam_acc TIGR02246;
tigrfam_desc conserved hypothetical protein;
tigrfam_name TIGR02246;
tigrfam_target db:TIGRFAMs.hmm|TIGR02246 evalue:1.8e-15 score:56.2 best_domain_score:55.9 name:TIGR02246;
31271 31819 CDS
ID metaerg.pl|13109
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
tm_num 1;
31271 31819 transmembrane_helix
ID metaerg.pl|13110
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
topology i31745-31813o;
32389 33300 CDS
ID metaerg.pl|13111
allko_ids K06911;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795100.1 1 303 evalue:3.0e-171 qcov:100.00 identity:94.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
pfam_acc PF02678; PF05726;
pfam_desc Pirin; Pirin C-terminal cupin domain;
pfam_id Pirin; Pirin_C;
pfam_target db:Pfam-A.hmm|PF02678.16 evalue:7.9e-35 score:118.4 best_domain_score:117.2 name:Pirin; db:Pfam-A.hmm|PF05726.13 evalue:4.4e-29 score:100.1 best_domain_score:96.6 name:Pirin_C;
sprot_desc Pirin-like protein CC_0481;
sprot_id sp|P58112|Y481_CAUVC;
sprot_target db:uniprot_sprot|sp|P58112|Y481_CAUVC 1 298 evalue:1.8e-58 qcov:98.30 identity:40.80;
33375 34127 CDS
ID metaerg.pl|13112
allec_ids 2.1.-.-;
allgo_ids GO:0005759; GO:0016740; GO:0006783; GO:0016226;
allko_ids K22073;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibaca;s__Roseibaca calidilacus;
genomedb_acc GCF_001517585.1;
genomedb_target db:genomedb|GCF_001517585.1|WP_072247394.1 3 244 evalue:1.7e-95 qcov:96.80 identity:72.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
pfam_acc PF01571;
pfam_desc Aminomethyltransferase folate-binding domain;
pfam_id GCV_T;
pfam_target db:Pfam-A.hmm|PF01571.21 evalue:8.4e-08 score:31.1 best_domain_score:30.4 name:GCV_T;
sprot_desc Putative transferase CAF17 homolog, mitochondrial;
sprot_id sp|B8JMH0|CAF17_DANRE;
sprot_target db:uniprot_sprot|sp|B8JMH0|CAF17_DANRE 3 247 evalue:2.4e-24 qcov:98.00 identity:30.80;
tigrfam_acc TIGR03317;
tigrfam_desc folate-binding protein YgfZ;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ygfZ_signature;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR03317 evalue:7.7e-23 score:79.4 best_domain_score:78.9 name:TIGR03317;
34179 35201 CDS
ID metaerg.pl|13113
allgo_ids GO:0016020; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480030.1 2 324 evalue:1.3e-138 qcov:95.00 identity:81.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:9.6e-19 score:67.2 best_domain_score:39.7 name:EamA;
tm_num 9;
34179 35201 transmembrane_helix
ID metaerg.pl|13114
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
topology o34206-34271i34290-34358o34401-34469i34488-34541o34551-34610i34629-34697o34725-34793i34812-34880o34923-35027i;
35284 36372 CDS
ID metaerg.pl|13115
allec_ids 2.6.1.9;
allgo_ids GO:0009058; GO:0030170; GO:0004400; GO:0000105;
allko_ids K00817; K00825;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071481952.1 1 361 evalue:8.5e-173 qcov:99.70 identity:84.20;
kegg_pathway_id 00310; 00401; 00400; 00300; 00360; 00340; 00350;
kegg_pathway_name Lysine degradation; Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Lysine biosynthesis; Phenylalanine metabolism; Histidine metabolism; Tyrosine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
metacyc_pathway_id HISTSYN-PWY; PRPP-PWY;
metacyc_pathway_name L-histidine biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type HISTIDINE-SYN;; Super-Pathways;;
pfam_acc PF00155; PF00266;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V;
pfam_id Aminotran_1_2; Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:5e-53 score:179.8 best_domain_score:179.6 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:2.5e-09 score:35.8 best_domain_score:35.2 name:Aminotran_5;
sprot_desc Histidinol-phosphate aminotransferase;
sprot_id sp|A4WUN9|HIS8_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WUN9|HIS8_RHOS5 1 357 evalue:3.1e-137 qcov:98.60 identity:65.30;
tigrfam_acc TIGR01141;
tigrfam_desc histidinol-phosphate transaminase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name hisC;
tigrfam_sub1role Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01141 evalue:1e-92 score:309.9 best_domain_score:309.7 name:TIGR01141;
36369 37286 CDS
ID metaerg.pl|13116
allec_ids 1.3.1.43;
allgo_ids GO:0050661; GO:0047794; GO:0070403; GO:0008977; GO:0004665; GO:0042803; GO:0006571;
allko_ids K00220; K04518; K00800; K01713; K04517; K01850; K00951; K13830; K00210; K00945; K03785; K14170; K00014; K01735; K14187; K00891; K04093; K04092; K03856;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386069.1 3 302 evalue:1.4e-144 qcov:98.40 identity:87.00;
kegg_pathway_id 00400; 00230; 00401; 00240;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Purine metabolism; Novobiocin biosynthesis; Pyrimidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
metacyc_pathway_id PWY-6120;
metacyc_pathway_name L-tyrosine biosynthesis III;;
metacyc_pathway_type TYROSINE-SYN;;
pfam_acc PF03807; PF03446; PF02153;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; NAD binding domain of 6-phosphogluconate dehydrogenase; Prephenate dehydrogenase;
pfam_id F420_oxidored; NAD_binding_2; PDH;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:3.2e-08 score:33.3 best_domain_score:32.4 name:F420_oxidored; db:Pfam-A.hmm|PF03446.15 evalue:4.4e-06 score:26.2 best_domain_score:25.2 name:NAD_binding_2; db:Pfam-A.hmm|PF02153.17 evalue:6.9e-71 score:237.5 best_domain_score:237.3 name:PDH;
sp YES;
sprot_desc Cyclohexadienyl dehydrogenase;
sprot_id sp|Q04983|TYRC_ZYMMO;
sprot_target db:uniprot_sprot|sp|Q04983|TYRC_ZYMMO 5 285 evalue:6.1e-54 qcov:92.10 identity:41.60;
36369 36461 signal_peptide
ID metaerg.pl|13117
Note TAT;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
37300 38004 CDS
ID metaerg.pl|13118
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468180.1 2 234 evalue:4.2e-80 qcov:99.60 identity:63.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
pfam_acc PF06904;
pfam_desc Extensin-like protein C-terminus;
pfam_id Extensin-like_C;
pfam_target db:Pfam-A.hmm|PF06904.12 evalue:6.2e-48 score:162.4 best_domain_score:162.1 name:Extensin-like_C;
sp YES;
37300 37350 lipoprotein_signal_peptide
ID metaerg.pl|13119
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
38486 39243 bac_16SrRNA
ID metaerg.pl|13120
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 27.6585; 0.558412; 2.9879; 49.6097; 18.4049;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|MEHT01000048.404.1852 5 758 evalue:0.0 qcov:99 identity:97.878;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseinatronobacter;
>Feature NODE_1188_length_30529_cov_9.36119
318 1 bac_16SrRNA
ID metaerg.pl|13121
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|EF432315.1.1512 1 314 evalue:1.79e-132 qcov:99 identity:93.968;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Nostocales;
1193 684 CDS
ID metaerg.pl|13122
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106135557.1 1 169 evalue:2.1e-73 qcov:100.00 identity:78.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF10652;
pfam_desc Protein of unknown function (DUF2480);
pfam_id DUF2480;
pfam_target db:Pfam-A.hmm|PF10652.9 evalue:4.9e-71 score:237.2 best_domain_score:237.0 name:DUF2480;
1882 1190 CDS
ID metaerg.pl|13123
allgo_ids GO:0005829; GO:0042802; GO:0008237; GO:0002949;
allko_ids K14742;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106135558.1 1 230 evalue:5.7e-82 qcov:100.00 identity:67.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF00814;
pfam_desc Glycoprotease family;
pfam_id Peptidase_M22;
pfam_target db:Pfam-A.hmm|PF00814.25 evalue:1.5e-27 score:96.2 best_domain_score:95.1 name:Peptidase_M22;
sprot_desc tRNA threonylcarbamoyladenosine biosynthesis protein TsaB;
sprot_id sp|P76256|TSAB_ECOLI;
sprot_target db:uniprot_sprot|sp|P76256|TSAB_ECOLI 4 217 evalue:8.7e-21 qcov:93.00 identity:31.70;
tigrfam_acc TIGR03725;
tigrfam_desc tRNA threonylcarbamoyl adenosine modification protein YeaZ;
tigrfam_mainrole Protein synthesis;
tigrfam_name T6A_YeaZ;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03725 evalue:1e-49 score:168.6 best_domain_score:168.4 name:TIGR03725;
3556 1886 CDS
ID metaerg.pl|13124
allec_ids 3.4.21.-;
allgo_ids GO:0005515;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106135559.1 1 556 evalue:9.0e-283 qcov:100.00 identity:89.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF13180; PF17820; PF03572;
pfam_desc PDZ domain; PDZ domain; Peptidase family S41;
pfam_id PDZ_2; PDZ_6; Peptidase_S41;
pfam_target db:Pfam-A.hmm|PF13180.6 evalue:4.8e-09 score:35.7 best_domain_score:34.1 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:3.3e-08 score:32.5 best_domain_score:31.4 name:PDZ_6; db:Pfam-A.hmm|PF03572.18 evalue:1e-50 score:170.8 best_domain_score:169.7 name:Peptidase_S41;
tigrfam_acc TIGR00225;
tigrfam_desc C-terminal processing peptidase;
tigrfam_mainrole Protein fate;
tigrfam_name prc;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00225 evalue:3.8e-83 score:278.4 best_domain_score:277.6 name:TIGR00225;
tm_num 1;
3556 1886 transmembrane_helix
ID metaerg.pl|13125
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
topology i1910-1963o;
3942 3553 CDS
ID metaerg.pl|13126
allec_ids 3.1.26.5;
allgo_ids GO:0000049; GO:0004526; GO:0008033; GO:0001682;
allko_ids K03536;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106135560.1 1 129 evalue:6.3e-54 qcov:100.00 identity:86.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
metacyc_pathway_id PWY0-1479;
metacyc_pathway_name tRNA processing;;
metacyc_pathway_type Nucleic-Acid-Processing;;
pfam_acc PF00825;
pfam_desc Ribonuclease P;
pfam_id Ribonuclease_P;
pfam_target db:Pfam-A.hmm|PF00825.18 evalue:6.4e-19 score:67.3 best_domain_score:67.1 name:Ribonuclease_P;
sprot_desc Ribonuclease P protein component;
sprot_id sp|B2RHI3|RNPA_PORG3;
sprot_target db:uniprot_sprot|sp|B2RHI3|RNPA_PORG3 3 118 evalue:6.6e-10 qcov:89.90 identity:33.60;
tigrfam_acc TIGR00188;
tigrfam_desc ribonuclease P protein component;
tigrfam_mainrole Transcription;
tigrfam_name rnpA;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR00188 evalue:2.6e-12 score:46.1 best_domain_score:45.8 name:TIGR00188;
4286 5926 CDS
ID metaerg.pl|13127
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106135561.1 1 543 evalue:3.5e-223 qcov:99.50 identity:66.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF05299; PF17899;
pfam_desc M61 glycyl aminopeptidase; Peptidase M61 N-terminal domain;
pfam_id Peptidase_M61; Peptidase_M61_N;
pfam_target db:Pfam-A.hmm|PF05299.12 evalue:2.6e-31 score:107.7 best_domain_score:104.8 name:Peptidase_M61; db:Pfam-A.hmm|PF17899.1 evalue:2.2e-38 score:131.2 best_domain_score:130.7 name:Peptidase_M61_N;
6874 6140 CDS
ID metaerg.pl|13128
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106135562.1 1 244 evalue:1.1e-96 qcov:100.00 identity:73.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
sp YES;
6140 6214 signal_peptide
ID metaerg.pl|13129
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
8977 6935 CDS
ID metaerg.pl|13130
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032746.1 1 680 evalue:0.0e+00 qcov:100.00 identity:91.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF00675; PF05193;
pfam_desc Insulinase (Peptidase family M16); Peptidase M16 inactive domain;
pfam_id Peptidase_M16; Peptidase_M16_C;
pfam_target db:Pfam-A.hmm|PF00675.20 evalue:2e-07 score:30.3 best_domain_score:28.7 name:Peptidase_M16; db:Pfam-A.hmm|PF05193.21 evalue:2.3e-35 score:121.5 best_domain_score:108.7 name:Peptidase_M16_C;
sp YES;
6935 6991 signal_peptide
ID metaerg.pl|13131
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
10329 9001 CDS
ID metaerg.pl|13132
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032747.1 1 442 evalue:1.2e-237 qcov:100.00 identity:93.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF00675; PF05193;
pfam_desc Insulinase (Peptidase family M16); Peptidase M16 inactive domain;
pfam_id Peptidase_M16; Peptidase_M16_C;
pfam_target db:Pfam-A.hmm|PF00675.20 evalue:2.1e-25 score:88.7 best_domain_score:87.2 name:Peptidase_M16; db:Pfam-A.hmm|PF05193.21 evalue:8.1e-30 score:103.4 best_domain_score:101.7 name:Peptidase_M16_C;
sp YES;
9001 9060 signal_peptide
ID metaerg.pl|13133
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
11696 10623 CDS
ID metaerg.pl|13134
allec_ids 2.7.1.-;
allgo_ids GO:0016301; GO:0016773;
allko_ids K00847;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106135565.1 27 357 evalue:2.7e-171 qcov:92.70 identity:92.40;
kegg_pathway_id 00500; 00051;
kegg_pathway_name Starch and sucrose metabolism; Fructose and mannose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
metacyc_pathway_id PWY-6577; PWY0-1261; LIPA-CORESYN-PWY; PLPSAL-PWY; PWY-5107; LPSSYN-PWY; PWY0-845; PWY0-163; P1-PWY; PWY-5381;
metacyc_pathway_name farnesylcysteine salvage pathway;; anhydromuropeptides recycling I;; lipid A-core biosynthesis (E. coli K-12);; pyridoxal 5'-phosphate salvage I;; phytol salvage pathway;; superpathway of lipopolysaccharide biosynthesis;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;; ; ; pyridine nucleotide cycling (plants);;
metacyc_pathway_type All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; Anhydromuropeptides-Recycling;; Glycan-Biosynthesis; Lipid-Biosynthesis;; Vitamin-B6-Biosynthesis;; DITERPENOID-SYN;; Lipid-Biosynthesis; Super-Pathways;; Super-Pathways; Vitamin-B6-Biosynthesis;; ; ; NAD-Metabolism;;
pfam_acc PF00294;
pfam_desc pfkB family carbohydrate kinase;
pfam_id PfkB;
pfam_target db:Pfam-A.hmm|PF00294.24 evalue:3.6e-57 score:193.2 best_domain_score:192.8 name:PfkB;
sprot_desc Uncharacterized sugar kinase slr0537;
sprot_id sp|Q55480|YZ37_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55480|YZ37_SYNY3 29 352 evalue:3.0e-84 qcov:90.80 identity:47.80;
12819 11653 CDS
ID metaerg.pl|13135
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032749.1 1 388 evalue:5.8e-212 qcov:100.00 identity:88.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
13766 12894 CDS
ID metaerg.pl|13136
allec_ids 3.1.4.46;
allgo_ids GO:0006629; GO:0008081; GO:0008889; GO:0046872; GO:0006071;
allko_ids K01126;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_016255670.1 1 290 evalue:6.2e-134 qcov:100.00 identity:79.00;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
metacyc_pathway_id PWY0-381;
metacyc_pathway_name glycerol and glycerophosphodiester degradation;;
metacyc_pathway_type GLYCEROL-DEG; Super-Pathways;;
pfam_acc PF03009;
pfam_desc Glycerophosphoryl diester phosphodiesterase family;
pfam_id GDPD;
pfam_target db:Pfam-A.hmm|PF03009.17 evalue:1.9e-38 score:131.9 best_domain_score:131.5 name:GDPD;
sp YES;
sprot_desc Putative glycerophosphodiester phosphodiesterase YhdW;
sprot_id sp|O07592|YHDW_BACSU;
sprot_target db:uniprot_sprot|sp|O07592|YHDW_BACSU 28 285 evalue:1.6e-16 qcov:89.00 identity:27.50;
12894 12950 signal_peptide
ID metaerg.pl|13137
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
15305 13923 CDS
ID metaerg.pl|13138
allko_ids K00689;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032751.1 1 456 evalue:1.2e-256 qcov:99.10 identity:90.80;
kegg_pathway_id 00500; 02020;
kegg_pathway_name Starch and sucrose metabolism; Two-component system - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF07661;
pfam_desc MORN repeat variant;
pfam_id MORN_2;
pfam_target db:Pfam-A.hmm|PF07661.13 evalue:2.2e-21 score:72.7 best_domain_score:19.6 name:MORN_2;
sp YES;
13923 13973 signal_peptide
ID metaerg.pl|13139
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
16730 15399 CDS
ID metaerg.pl|13140
allec_ids 2.8.4.4; 2.1.1.- 2.8.1.-;
allgo_ids GO:0003824; GO:0051536; GO:0005737; GO:0051539; GO:0046872; GO:0103039; GO:0018339; GO:0006400;
allko_ids K14441;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032752.1 8 443 evalue:1.2e-240 qcov:98.40 identity:93.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF04055; PF01938; PF18693; PF00919;
pfam_desc Radical SAM superfamily; TRAM domain; TRAM domain; Uncharacterized protein family UPF0004;
pfam_id Radical_SAM; TRAM; TRAM_2; UPF0004;
pfam_target db:Pfam-A.hmm|PF04055.21 evalue:7.6e-24 score:84.2 best_domain_score:81.5 name:Radical_SAM; db:Pfam-A.hmm|PF01938.20 evalue:1.6e-05 score:24.1 best_domain_score:23.0 name:TRAM; db:Pfam-A.hmm|PF18693.1 evalue:9.9e-21 score:72.9 best_domain_score:71.8 name:TRAM_2; db:Pfam-A.hmm|PF00919.20 evalue:6.2e-26 score:89.6 best_domain_score:88.7 name:UPF0004;
sprot_desc Ribosomal protein S12 methylthiotransferase RimO;
sprot_id sp|Q11XC6|RIMO_CYTH3;
sprot_target db:uniprot_sprot|sp|Q11XC6|RIMO_CYTH3 8 443 evalue:1.7e-182 qcov:98.40 identity:67.20;
tigrfam_acc TIGR00089; TIGR01125;
tigrfam_desc radical SAM methylthiotransferase, MiaB/RimO family; ribosomal protein S12 methylthiotransferase RimO;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00089; TIGR01125;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00089 evalue:8.7e-122 score:406.1 best_domain_score:405.8 name:TIGR00089; db:TIGRFAMs.hmm|TIGR01125 evalue:4.4e-146 score:486.5 best_domain_score:486.2 name:TIGR01125;
17834 17253 CDS
ID metaerg.pl|13141
allgo_ids GO:0003700; GO:0006355; GO:0043565;
allko_ids K10778; K13529; K13530; K00567;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Cecembia;s__Cecembia lonarensis;
genomedb_acc GCF_000298295.1;
genomedb_target db:genomedb|GCF_000298295.1|WP_009187064.1 9 193 evalue:8.5e-63 qcov:95.90 identity:63.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF12833; PF00165;
pfam_desc Helix-turn-helix domain; Bacterial regulatory helix-turn-helix proteins, AraC family;
pfam_id HTH_18; HTH_AraC;
pfam_target db:Pfam-A.hmm|PF12833.7 evalue:2.3e-14 score:52.7 best_domain_score:52.1 name:HTH_18; db:Pfam-A.hmm|PF00165.23 evalue:5.6e-08 score:31.9 best_domain_score:30.5 name:HTH_AraC;
19248 17875 CDS
ID metaerg.pl|13142
allec_ids 1.-.-.-;
allgo_ids GO:0016491;
allko_ids K13016;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032753.1 1 455 evalue:8.0e-245 qcov:99.60 identity:85.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
metacyc_pathway_id PWY-6113; PWYG-321; PWY-5469; PWY-5479; PWY-5987; PWY-2821; PWY-5826; PWY-4302; PWY-5271;
metacyc_pathway_name superpathway of mycolate biosynthesis;; mycolate biosynthesis;; sesamin biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;;
metacyc_pathway_type Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; LIGNAN-SYN;; LIGNAN-SYN;; QUINONE-SYN;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;;
pfam_acc PF01408; PF02894; PF03447;
pfam_desc Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; Homoserine dehydrogenase, NAD binding domain;
pfam_id GFO_IDH_MocA; GFO_IDH_MocA_C; NAD_binding_3;
pfam_target db:Pfam-A.hmm|PF01408.22 evalue:4.6e-24 score:84.8 best_domain_score:83.9 name:GFO_IDH_MocA; db:Pfam-A.hmm|PF02894.17 evalue:4.1e-18 score:64.7 best_domain_score:63.6 name:GFO_IDH_MocA_C; db:Pfam-A.hmm|PF03447.16 evalue:1.2e-06 score:28.4 best_domain_score:27.8 name:NAD_binding_3;
sp YES;
sprot_desc Putative oxidoreductase YteT;
sprot_id sp|O34371|YTET_BACSU;
sprot_target db:uniprot_sprot|sp|O34371|YTET_BACSU 46 449 evalue:3.6e-74 qcov:88.40 identity:36.60;
tm_num 1;
17875 17973 signal_peptide
ID metaerg.pl|13143
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
19248 17875 transmembrane_helix
ID metaerg.pl|13144
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
topology i17911-17979o;
20419 19346 CDS
ID metaerg.pl|13145
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032754.1 37 357 evalue:2.9e-141 qcov:89.90 identity:75.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
sp YES;
tm_num 1;
19346 19453 signal_peptide
ID metaerg.pl|13146
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
20419 19346 transmembrane_helix
ID metaerg.pl|13147
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
topology i19406-19459o;
21047 20481 CDS
ID metaerg.pl|13148
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_040490750.1 1 185 evalue:2.0e-77 qcov:98.40 identity:82.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
tm_num 3;
21047 20481 transmembrane_helix
ID metaerg.pl|13149
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
topology i20598-20666o20694-20762i20973-21041o;
21912 21121 CDS
ID metaerg.pl|13150
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Algoriphagus;s__Algoriphagus marincola_A;
genomedb_acc GCF_000526355.1;
genomedb_target db:genomedb|GCF_000526355.1|WP_024284547.1 3 260 evalue:3.1e-31 qcov:98.10 identity:34.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF13671;
pfam_desc AAA domain;
pfam_id AAA_33;
pfam_target db:Pfam-A.hmm|PF13671.6 evalue:4.4e-07 score:29.4 best_domain_score:27.1 name:AAA_33;
22207 21905 CDS
ID metaerg.pl|13151
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Salinimicrobium;s__Salinimicrobium sediminis;
genomedb_acc GCF_900215295.1;
genomedb_target db:genomedb|GCF_900215295.1|WP_097057382.1 11 92 evalue:1.2e-07 qcov:82.00 identity:40.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
22514 22170 CDS
ID metaerg.pl|13152
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Algoriphagus;s__Algoriphagus faecimaris;
genomedb_acc GCF_900101705.1;
genomedb_target db:genomedb|GCF_900101705.1|WP_087937715.1 1 105 evalue:2.3e-31 qcov:92.10 identity:63.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
23316 22741 CDS
ID metaerg.pl|13153
allgo_ids GO:0010181;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032756.1 1 191 evalue:7.6e-56 qcov:100.00 identity:53.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF01243; PF12766;
pfam_desc Pyridoxamine 5'-phosphate oxidase; Pyridoxamine 5'-phosphate oxidase;
pfam_id Putative_PNPOx; Pyridox_oxase_2;
pfam_target db:Pfam-A.hmm|PF01243.20 evalue:2.1e-10 score:39.9 best_domain_score:39.1 name:Putative_PNPOx; db:Pfam-A.hmm|PF12766.7 evalue:3.8e-11 score:42.7 best_domain_score:42.1 name:Pyridox_oxase_2;
26218 23606 CDS
ID metaerg.pl|13154
allgo_ids GO:0005524; GO:0005737; GO:0019538; GO:0042026; GO:0009408;
allko_ids K03695;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Indibacter;s__Indibacter alkaliphilus;
genomedb_acc GCF_000295935.2;
genomedb_target db:genomedb|GCF_000295935.2|WP_009032758.1 1 870 evalue:0.0e+00 qcov:100.00 identity:94.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF00004; PF13173; PF13191; PF07724; PF13401; PF07726; PF07728; PF17871; PF10431; PF02861; PF01695; PF01078; PF00910; PF00158; PF06414;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain; AAA ATPase domain; AAA domain (Cdc48 subfamily); AAA domain; ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); AAA lid domain; C-terminal, D2-small domain, of ClpB protein ; Clp amino terminal domain, pathogenicity island component; IstB-like ATP binding protein; Magnesium chelatase, subunit ChlI; RNA helicase; Sigma-54 interaction domain; Zeta toxin;
pfam_id AAA; AAA_14; AAA_16; AAA_2; AAA_22; AAA_3; AAA_5; AAA_lid_9; ClpB_D2-small; Clp_N; IstB_IS21; Mg_chelatase; RNA_helicase; Sigma54_activat; Zeta_toxin;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:5.6e-25 score:87.5 best_domain_score:48.4 name:AAA; db:Pfam-A.hmm|PF13173.6 evalue:9.3e-08 score:31.4 best_domain_score:14.4 name:AAA_14; db:Pfam-A.hmm|PF13191.6 evalue:1e-12 score:48.0 best_domain_score:27.7 name:AAA_16; db:Pfam-A.hmm|PF07724.14 evalue:1e-55 score:187.7 best_domain_score:177.4 name:AAA_2; db:Pfam-A.hmm|PF13401.6 evalue:5.3e-08 score:32.5 best_domain_score:14.6 name:AAA_22; db:Pfam-A.hmm|PF07726.11 evalue:6.5e-05 score:22.0 best_domain_score:11.7 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:8.5e-18 score:63.9 best_domain_score:46.7 name:AAA_5; db:Pfam-A.hmm|PF17871.1 evalue:1.1e-35 score:120.9 best_domain_score:120.9 name:AAA_lid_9; db:Pfam-A.hmm|PF10431.9 evalue:1.6e-23 score:81.8 best_domain_score:81.8 name:ClpB_D2-small; db:Pfam-A.hmm|PF02861.20 evalue:4.9e-16 score:57.8 best_domain_score:30.9 name:Clp_N; db:Pfam-A.hmm|PF01695.17 evalue:2.3e-06 score:26.7 best_domain_score:11.9 name:IstB_IS21; db:Pfam-A.hmm|PF01078.21 evalue:4.5e-05 score:22.1 best_domain_score:9.3 name:Mg_chelatase; db:Pfam-A.hmm|PF00910.22 evalue:7.6e-05 score:22.3 best_domain_score:8.3 name:RNA_helicase; db:Pfam-A.hmm|PF00158.26 evalue:1.3e-10 score:40.4 best_domain_score:30.5 name:Sigma54_activat; db:Pfam-A.hmm|PF06414.12 evalue:1.4e-05 score:23.7 best_domain_score:16.7 name:Zeta_toxin;
sprot_desc Chaperone protein ClpB;
sprot_id sp|Q89YY3|CLPB_BACTN;
sprot_target db:uniprot_sprot|sp|Q89YY3|CLPB_BACTN 1 861 evalue:0.0e+00 qcov:99.00 identity:66.20;
tigrfam_acc TIGR03346;
tigrfam_desc ATP-dependent chaperone protein ClpB;
tigrfam_mainrole Protein fate;
tigrfam_name chaperone_ClpB;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR03346 evalue:0 score:1283.6 best_domain_score:1283.4 name:TIGR03346;
26897 26409 CDS
ID metaerg.pl|13155
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106135578.1 1 162 evalue:1.4e-47 qcov:100.00 identity:71.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
sp YES;
tm_num 1;
26409 26474 signal_peptide
ID metaerg.pl|13156
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
26897 26409 transmembrane_helix
ID metaerg.pl|13157
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
topology o26418-26471i;
27073 30210 CDS
ID metaerg.pl|13158
allgo_ids GO:0005515;
allko_ids K07717; K07675; K10942; K13040; K07647; K11357; K11629; K10125; K04757; K07769; K11520; K14509; K11383; K02486; K12767; K07644; K13532; K07709; K07676; K10681; K06379; K07650; K01769; K07678; K10715; K13587; K11527; K02030; K07636; K07638; K07653; K02480; K14489; K02482; K08801; K01768; K07656; K07710; K07640; K07716; K07697; K02489; K10916; K08479; K03388; K02668; K02491; K11231; K07643; K08282; K01937; K10909; K07704; K07677; K07708; K07645; K11640; K11356; K02484; K07642; K11711; K07698; K07718; K07651; K07648; K02478; K07679; K11328; K13533; K00873; K07711; K07768; K02575; K11633; K07683; K11354; K07778; K07652; K07673; K07639; K08475; K07646; K07641; K13598; K07637; K03407; K07777; K07649; K07682; K00936; K07654;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Mongoliibacter;s__Mongoliibacter ruber;
genomedb_acc GCF_003003005.1;
genomedb_target db:genomedb|GCF_003003005.1|WP_106135579.1 1 1044 evalue:0.0e+00 qcov:99.90 identity:73.50;
kegg_pathway_id 00010; 00710; 05111; 00230; 00240; 02020; 04011; 00620; 03090; 00790;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyrimidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Pyruvate metabolism; Type II secretion system; Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
pfam_acc PF01590; PF02518; PF00512; PF16927; PF00072;
pfam_desc GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; N-terminal 7TM region of histidine kinase; Response regulator receiver domain;
pfam_id GAF; HATPase_c; HisKA; HisKA_7TM; Response_reg;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:2.9e-06 score:27.2 best_domain_score:26.3 name:GAF; db:Pfam-A.hmm|PF02518.26 evalue:3.2e-28 score:97.7 best_domain_score:94.3 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:3e-21 score:74.4 best_domain_score:72.6 name:HisKA; db:Pfam-A.hmm|PF16927.5 evalue:9.3e-40 score:136.2 best_domain_score:135.8 name:HisKA_7TM; db:Pfam-A.hmm|PF00072.24 evalue:1.2e-24 score:85.9 best_domain_score:84.5 name:Response_reg;
tigrfam_acc TIGR00229;
tigrfam_desc PAS domain S-box protein;
tigrfam_mainrole Regulatory functions;
tigrfam_name sensory_box;
tigrfam_sub1role Small molecule interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00229 evalue:2.5e-06 score:26.8 best_domain_score:22.5 name:TIGR00229;
tm_num 7;
27073 30210 transmembrane_helix
ID metaerg.pl|13159
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.03101; 7.19747; 15.7612; 0.916357; 25.9061;
topology i27091-27159o27187-27255i27292-27351o27361-27429i27508-27576o27619-27687i27700-27768o;
>Feature NODE_1195_length_30458_cov_17.1381
451 1224 CDS
ID metaerg.pl|13160
allgo_ids GO:0003700; GO:0006355; GO:0003677;
allko_ids K00825; K05799;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI65211.1 1 257 evalue:1.7e-130 qcov:100.00 identity:96.10;
kegg_pathway_id 00300; 00310;
kegg_pathway_name Lysine biosynthesis; Lysine degradation;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF07729; PF00392;
pfam_desc FCD domain; Bacterial regulatory proteins, gntR family;
pfam_id FCD; GntR;
pfam_target db:Pfam-A.hmm|PF07729.12 evalue:3.2e-21 score:75.3 best_domain_score:75.3 name:FCD; db:Pfam-A.hmm|PF00392.21 evalue:4.2e-24 score:83.2 best_domain_score:82.8 name:GntR;
sprot_desc Pyruvate dehydrogenase complex repressor;
sprot_id sp|P0A2S3|PDHR_SALTI;
sprot_target db:uniprot_sprot|sp|P0A2S3|PDHR_SALTI 1 250 evalue:5.5e-56 qcov:97.30 identity:46.00;
1221 3125 CDS
ID metaerg.pl|13161
allec_ids 2.7.13.3;
allgo_ids GO:0000155; GO:0007165; GO:0016021; GO:0005886; GO:0005524; GO:0032892;
allko_ids K11640; K11356; K02484; K07642; K11711; K02491; K07643; K11231; K08282; K07704; K10909; K07677; K07708; K07645; K07652; K08475; K07639; K07673; K13598; K07641; K07646; K07637; K03407; K07682; K07649; K00936; K07777; K07654; K07718; K07698; K07651; K07648; K07679; K02478; K13533; K11328; K07711; K00873; K08884; K11633; K07768; K07778; K11354; K07644; K07709; K13532; K06379; K07676; K10681; K07650; K01769; K07675; K07717; K11637; K13040; K10942; K07647; K11629; K10125; K02476; K11357; K04757; K14509; K11520; K07769; K12767; K11383; K02486; K07656; K01768; K07640; K07710; K11614; K07716; K07697; K02489; K10916; K08479; K07674; K03388; K02668; K10715; K07678; K07701; K11527; K02030; K13587; K07636; K07638; K07653; K02480; K08801; K02482; K14489;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000022.1_13 1 634 evalue:0.0e+00 qcov:100.00 identity:88.30;
kegg_pathway_id 05111; 00230; 00710; 00010; 00790; 03090; 00620; 04011; 02020;
kegg_pathway_name Vibrio cholerae pathogenic cycle; Purine metabolism; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Folate biosynthesis; Type II secretion system; Pyruvate metabolism; MAPK signaling pathway - yeast; Two-component system - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF02743; PF02518; PF14501; PF00512;
pfam_desc Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GHKL domain; His Kinase A (phospho-acceptor) domain;
pfam_id dCache_1; HATPase_c; HATPase_c_5; HisKA;
pfam_target db:Pfam-A.hmm|PF02743.18 evalue:1.5e-14 score:53.6 best_domain_score:53.6 name:dCache_1; db:Pfam-A.hmm|PF02518.26 evalue:2e-23 score:82.3 best_domain_score:81.5 name:HATPase_c; db:Pfam-A.hmm|PF14501.6 evalue:3.7e-06 score:26.0 best_domain_score:24.7 name:HATPase_c_5; db:Pfam-A.hmm|PF00512.25 evalue:1.4e-10 score:40.3 best_domain_score:40.3 name:HisKA;
sprot_desc C4-dicarboxylate transport sensor protein DctB;
sprot_id sp|Q9HU20|DCTB_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HU20|DCTB_PSEAE 13 619 evalue:1.8e-79 qcov:95.70 identity:33.20;
tm_num 2;
1221 3125 transmembrane_helix
ID metaerg.pl|13162
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
topology i1257-1325o2139-2207i;
3118 4500 CDS
ID metaerg.pl|13163
allgo_ids GO:0005524; GO:0043565; GO:0008134; GO:0000160; GO:0032892; GO:0006355;
allko_ids K07679; K02478; K07648; K07651; K07718; K07778; K11354; K07768; K07711; K07641; K07646; K07639; K08475; K07673; K01120; K07652; K07654; K07682; K03407; K07637; K11231; K07645; K07708; K07677; K07704; K01937; K08282; K00760; K02484; K11356; K11640; K11711; K07642; K11527; K10715; K07678; K02482; K02480; K07653; K07636; K02489; K07716; K07710; K01768; K02668; K03388; K08479; K10916; K07647; K07675; K07717; K12767; K11383; K13761; K02486; K07769; K04757; K10125; K11357; K07709; K07644; K01769; K06379; K10681; K07676; K10126;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064232629.1 1 460 evalue:9.2e-257 qcov:100.00 identity:97.80;
kegg_pathway_id 00983; 00230; 05111; 00240; 02020; 04011; 03090; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism; Two-component system - General; MAPK signaling pathway - yeast; Type II secretion system; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF00004; PF07728; PF02954; PF00072; PF00158; PF14532;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); Bacterial regulatory protein, Fis family; Response regulator receiver domain; Sigma-54 interaction domain; Sigma-54 interaction domain;
pfam_id AAA; AAA_5; HTH_8; Response_reg; Sigma54_activat; Sigma54_activ_2;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:9.4e-07 score:28.5 best_domain_score:27.4 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:1e-08 score:34.5 best_domain_score:32.7 name:AAA_5; db:Pfam-A.hmm|PF02954.19 evalue:5.9e-11 score:41.2 best_domain_score:39.1 name:HTH_8; db:Pfam-A.hmm|PF00072.24 evalue:1.2e-27 score:95.6 best_domain_score:94.7 name:Response_reg; db:Pfam-A.hmm|PF00158.26 evalue:1.1e-67 score:226.2 best_domain_score:225.7 name:Sigma54_activat; db:Pfam-A.hmm|PF14532.6 evalue:4e-22 score:78.0 best_domain_score:76.8 name:Sigma54_activ_2;
sprot_desc C4-dicarboxylate transport transcriptional regulatory protein DctD;
sprot_id sp|Q9HU19|DCTD_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9HU19|DCTD_PSEAE 9 449 evalue:1.0e-137 qcov:95.90 identity:58.10;
5147 4476 CDS
ID metaerg.pl|13164
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_027958894.1 1 223 evalue:4.1e-117 qcov:100.00 identity:93.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF04307;
pfam_desc LexA-binding, inner membrane-associated putative hydrolase;
pfam_id YdjM;
pfam_target db:Pfam-A.hmm|PF04307.14 evalue:2e-13 score:49.2 best_domain_score:48.6 name:YdjM;
tm_num 7;
5147 4476 transmembrane_helix
ID metaerg.pl|13165
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
topology i4494-4544o4554-4613i4650-4709o4722-4790i4809-4877o4890-4949i5040-5108o;
5810 5265 CDS
ID metaerg.pl|13166
allgo_ids GO:0005829; GO:0042802; GO:0008270; GO:0070207;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008959637.1 1 180 evalue:2.1e-92 qcov:99.40 identity:95.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF00132; PF14602;
pfam_desc Bacterial transferase hexapeptide (six repeats); Hexapeptide repeat of succinyl-transferase;
pfam_id Hexapep; Hexapep_2;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:6.6e-18 score:62.9 best_domain_score:27.9 name:Hexapep; db:Pfam-A.hmm|PF14602.6 evalue:5.5e-07 score:28.5 best_domain_score:17.1 name:Hexapep_2;
sprot_desc hypothetical protein;
sprot_id sp|P0A9W9|YRDA_ECOLI;
sprot_target db:uniprot_sprot|sp|P0A9W9|YRDA_ECOLI 1 181 evalue:9.2e-50 qcov:100.00 identity:60.20;
7193 5853 CDS
ID metaerg.pl|13167
allgo_ids GO:0016021; GO:0005886; GO:0005328;
allko_ids K03308;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000734975;
genomedb_acc GCF_000734975.2;
genomedb_target db:genomedb|GCF_000734975.2|WP_035564879.1 1 446 evalue:2.7e-229 qcov:100.00 identity:93.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF00209;
pfam_desc Sodium:neurotransmitter symporter family;
pfam_id SNF;
pfam_target db:Pfam-A.hmm|PF00209.18 evalue:2.4e-48 score:164.3 best_domain_score:92.2 name:SNF;
sprot_desc Uncharacterized sodium-dependent transporter YhdH;
sprot_id sp|O07577|YHDH_BACSU;
sprot_target db:uniprot_sprot|sp|O07577|YHDH_BACSU 7 446 evalue:7.5e-69 qcov:98.70 identity:34.60;
tm_num 11;
7193 5853 transmembrane_helix
ID metaerg.pl|13168
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
topology i5889-5951o5979-6047i6126-6194o6291-6359i6396-6464o6507-6575i6612-6680o6765-6833i6894-6962o7005-7073i7134-7187o;
7387 9435 CDS
ID metaerg.pl|13169
allec_ids 3.4.24.70;
allgo_ids GO:0004222; GO:0006508; GO:0046872; GO:0006518; GO:0006465;
allko_ids K01414;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF57206.1 1 682 evalue:0.0e+00 qcov:100.00 identity:91.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF01432;
pfam_desc Peptidase family M3;
pfam_id Peptidase_M3;
pfam_target db:Pfam-A.hmm|PF01432.20 evalue:1.4e-148 score:495.2 best_domain_score:494.9 name:Peptidase_M3;
sprot_desc Oligopeptidase A;
sprot_id sp|P44573|OPDA_HAEIN;
sprot_target db:uniprot_sprot|sp|P44573|OPDA_HAEIN 3 679 evalue:1.8e-223 qcov:99.30 identity:54.50;
9486 9737 CDS
ID metaerg.pl|13170
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035576436.1 1 83 evalue:4.3e-40 qcov:100.00 identity:96.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF09526;
pfam_desc Probable metal-binding protein (DUF2387);
pfam_id DUF2387;
pfam_target db:Pfam-A.hmm|PF09526.10 evalue:9.8e-28 score:95.4 best_domain_score:95.2 name:DUF2387;
tigrfam_acc TIGR02443;
tigrfam_desc conserved hypothetical protein;
tigrfam_name TIGR02443;
tigrfam_target db:TIGRFAMs.hmm|TIGR02443 evalue:1.5e-16 score:59.1 best_domain_score:58.7 name:TIGR02443;
10157 11146 CDS
ID metaerg.pl|13171
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas stevensii;
genomedb_acc GCF_000275725.1;
genomedb_target db:genomedb|GCF_000275725.1|WP_016915668.1 1 329 evalue:1.8e-169 qcov:100.00 identity:88.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF16868;
pfam_desc NMT1-like family;
pfam_id NMT1_3;
pfam_target db:Pfam-A.hmm|PF16868.5 evalue:2e-74 score:249.8 best_domain_score:249.6 name:NMT1_3;
sp YES;
tigrfam_acc TIGR02122;
tigrfam_desc TRAP transporter solute receptor, TAXI family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TRAP_TAXI;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR02122 evalue:2e-50 score:170.6 best_domain_score:170.5 name:TIGR02122;
10157 10228 signal_peptide
ID metaerg.pl|13172
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
11282 13489 CDS
ID metaerg.pl|13173
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_B;s__Halomonas_B sp001971685;
genomedb_acc GCF_001971685.1;
genomedb_target db:genomedb|GCF_001971685.1|WP_076749659.1 1 727 evalue:0.0e+00 qcov:98.90 identity:86.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:8.7e-87 score:290.8 best_domain_score:290.8 name:DctM;
tigrfam_acc TIGR02123;
tigrfam_desc TRAP transporter, 4TM/12TM fusion protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name TRAP_fused;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR02123 evalue:1.8e-185 score:617.3 best_domain_score:605.8 name:TIGR02123;
tm_num 18;
11282 13489 transmembrane_helix
ID metaerg.pl|13174
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
topology i11426-11494o11507-11575i11612-11671o11714-11782i11819-11872o11900-11968i11987-12055o12113-12181i12260-12328o12488-12547i12626-12694o12800-12868i12887-12955o12965-13033i13052-13120o13148-13216i13253-13321o13349-13417i;
14448 13606 CDS
ID metaerg.pl|13175
allec_ids 1.5.1.20;
allgo_ids GO:0004489; GO:0006555; GO:0055114; GO:0005829; GO:0009086; GO:0035999;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035576433.1 1 280 evalue:8.6e-157 qcov:100.00 identity:97.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
metacyc_pathway_id PWY-3841; 1CMET2-PWY; PWY-2201;
metacyc_pathway_name folate transformations II;; N10-formyl-tetrahydrofolate biosynthesis;; folate transformations I;;
metacyc_pathway_type Folate-Transformations;; Folate-Biosynthesis;; Folate-Transformations;;
pfam_acc PF02219;
pfam_desc Methylenetetrahydrofolate reductase;
pfam_id MTHFR;
pfam_target db:Pfam-A.hmm|PF02219.17 evalue:3.4e-87 score:291.6 best_domain_score:291.4 name:MTHFR;
sprot_desc 5,10-methylenetetrahydrofolate reductase;
sprot_id sp|P71319|METF_PECCC;
sprot_target db:uniprot_sprot|sp|P71319|METF_PECCC 8 268 evalue:2.8e-53 qcov:93.20 identity:38.90;
tigrfam_acc TIGR00676;
tigrfam_desc methylenetetrahydrofolate reductase [NAD(P)H];
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name fadh2;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00676 evalue:1.8e-99 score:331.7 best_domain_score:331.5 name:TIGR00676;
14592 15527 CDS
ID metaerg.pl|13176
allgo_ids GO:0016021; GO:0055085;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002715145;
genomedb_acc GCA_002715145.1;
genomedb_target db:genomedb|GCA_002715145.1|MBF57201.1 1 311 evalue:3.5e-143 qcov:100.00 identity:90.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF03547; PF01758;
pfam_desc Membrane transport protein; Sodium Bile acid symporter family;
pfam_id Mem_trans; SBF;
pfam_target db:Pfam-A.hmm|PF03547.18 evalue:1.3e-10 score:39.5 best_domain_score:26.4 name:Mem_trans; db:Pfam-A.hmm|PF01758.16 evalue:3.9e-06 score:25.9 best_domain_score:25.9 name:SBF;
tm_num 10;
14592 15527 transmembrane_helix
ID metaerg.pl|13177
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
topology o14601-14669i14694-14753o14781-14840i14874-14942o14952-15020i15078-15146o15159-15227i15264-15332o15345-15404i15438-15506o;
17228 15552 CDS
ID metaerg.pl|13178
allec_ids 6.5.1.2;
allgo_ids GO:0003911; GO:0006281; GO:0006260;
allko_ids K01972;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ88152.1 1 558 evalue:6.7e-286 qcov:100.00 identity:84.40;
kegg_pathway_id 03420; 03430; 03410; 03030;
kegg_pathway_name Nucleotide excision repair; Mismatch repair; Base excision repair; DNA replication;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF01653; PF03120;
pfam_desc NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase OB-fold domain;
pfam_id DNA_ligase_aden; DNA_ligase_OB;
pfam_target db:Pfam-A.hmm|PF01653.18 evalue:2e-26 score:92.1 best_domain_score:91.1 name:DNA_ligase_aden; db:Pfam-A.hmm|PF03120.16 evalue:4.2e-22 score:77.1 best_domain_score:76.2 name:DNA_ligase_OB;
sp YES;
sprot_desc DNA ligase B;
sprot_id sp|A4XPF7|LIGB_PSEMY;
sprot_target db:uniprot_sprot|sp|A4XPF7|LIGB_PSEMY 2 558 evalue:8.5e-163 qcov:99.80 identity:51.60;
15552 15620 signal_peptide
ID metaerg.pl|13179
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
18576 17356 CDS
ID metaerg.pl|13180
allec_ids 2.5.1.6;
allgo_ids GO:0004478; GO:0006556; GO:0005737; GO:0005524; GO:0000287; GO:0006730;
allko_ids K00789;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001651035;
genomedb_acc GCF_001651035.1;
genomedb_target db:genomedb|GCF_001651035.1|WP_064232605.1 1 406 evalue:2.1e-228 qcov:100.00 identity:96.80;
kegg_pathway_id 00450; 00271;
kegg_pathway_name Selenoamino acid metabolism; Methionine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
metacyc_pathway_id PWY-6151; PWY-5328; METHIONINE-DEG1-PWY; PWY-5041; SAM-PWY; MET-SAM-PWY; PWY-6292; PWY0-781;
metacyc_pathway_name S-adenosyl-L-methionine cycle I;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; S-adenosyl-L-methionine cycle II;; S-adenosyl-L-methionine biosynthesis;; superpathway of S-adenosyl-L-methionine biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; aspartate superpathway;;
metacyc_pathway_type S-adenosyl-L-methionine-cycle; Super-Pathways;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; S-adenosyl-L-methionine-cycle;; Cofactor-Biosynthesis;; Super-Pathways;; CYSTEINE-SYN; Super-Pathways;; Super-Pathways;;
pfam_acc PF02773; PF02772; PF00438;
pfam_desc S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain;
pfam_id S-AdoMet_synt_C; S-AdoMet_synt_M; S-AdoMet_synt_N;
pfam_target db:Pfam-A.hmm|PF02773.16 evalue:5.2e-66 score:220.1 best_domain_score:219.2 name:S-AdoMet_synt_C; db:Pfam-A.hmm|PF02772.16 evalue:4.2e-48 score:161.8 best_domain_score:160.1 name:S-AdoMet_synt_M; db:Pfam-A.hmm|PF00438.20 evalue:5.1e-41 score:138.6 best_domain_score:137.5 name:S-AdoMet_synt_N;
sprot_desc S-adenosylmethionine synthase;
sprot_id sp|Q1R0L1|METK_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1R0L1|METK_CHRSD 1 406 evalue:6.6e-205 qcov:100.00 identity:88.90;
tigrfam_acc TIGR01034;
tigrfam_desc methionine adenosyltransferase;
tigrfam_mainrole Central intermediary metabolism;
tigrfam_name metK;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01034 evalue:3.7e-181 score:601.3 best_domain_score:599.6 name:TIGR01034;
18806 20821 CDS
ID metaerg.pl|13181
allec_ids 2.2.1.1;
allgo_ids GO:0008661; GO:0016114; GO:0005829; GO:0046872; GO:0004802; GO:0006098;
allko_ids K00163; K00615;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ88208.1 1 669 evalue:0.0e+00 qcov:99.70 identity:96.90;
kegg_pathway_id 01051; 00252; 00620; 00650; 00290; 00030; 00010; 00710; 00020;
kegg_pathway_name Biosynthesis of ansamycins; Alanine and aspartate metabolism; Pyruvate metabolism; Butanoate metabolism; Valine, leucine and isoleucine biosynthesis; Pentose phosphate pathway; Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Citrate cycle (TCA cycle);
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
metacyc_pathway_id PHOTOALL-PWY; PWY-5723; PWY-1861; NONOXIPENT-PWY; P185-PWY; P124-PWY; PWY-5979; PENTOSE-P-PWY; P21-PWY; CALVIN-PWY; PWY-5993;
metacyc_pathway_name oxygenic photosynthesis;; Rubisco shunt;; formaldehyde assimilation II (assimilatory RuMP Cycle);; pentose phosphate pathway (non-oxidative branch);; formaldehyde assimilation III (dihydroxyacetone cycle);; Bifidobacterium shunt;; 3-amino-5-hydroxybenzoate biosynthesis;; pentose phosphate pathway;; pentose phosphate pathway (partial);; Calvin-Benson-Bassham cycle;; superpathway of rifamycin B biosynthesis;;
metacyc_pathway_type Photosynthesis; Super-Pathways;; Energy-Metabolism;; Formaldehyde-Assimilation;; Pentose-Phosphate-Cycle;; Formaldehyde-Assimilation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Pentose-Phosphate-Cycle; Super-Pathways;; Pentose-Phosphate-Cycle;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; Antibiotic-Biosynthesis; Super-Pathways;;
pfam_acc PF13292; PF02775; PF02780; PF00456; PF02779;
pfam_desc 1-deoxy-D-xylulose-5-phosphate synthase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Transketolase, C-terminal domain; Transketolase, thiamine diphosphate binding domain; Transketolase, pyrimidine binding domain;
pfam_id DXP_synthase_N; TPP_enzyme_C; Transketolase_C; Transketolase_N; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF13292.6 evalue:1.5e-05 score:23.6 best_domain_score:15.6 name:DXP_synthase_N; db:Pfam-A.hmm|PF02775.21 evalue:1.1e-05 score:24.4 best_domain_score:19.7 name:TPP_enzyme_C; db:Pfam-A.hmm|PF02780.20 evalue:1.3e-16 score:59.8 best_domain_score:58.9 name:Transketolase_C; db:Pfam-A.hmm|PF00456.21 evalue:1.5e-161 score:536.1 best_domain_score:535.8 name:Transketolase_N; db:Pfam-A.hmm|PF02779.24 evalue:3.3e-47 score:159.7 best_domain_score:158.7 name:Transket_pyr;
sprot_desc Transketolase 1;
sprot_id sp|Q9KUP2|TKT1_VIBCH;
sprot_target db:uniprot_sprot|sp|Q9KUP2|TKT1_VIBCH 1 670 evalue:2.6e-267 qcov:99.90 identity:67.00;
tigrfam_acc TIGR00232;
tigrfam_desc transketolase;
tigrfam_mainrole Energy metabolism;
tigrfam_name tktlase_bact;
tigrfam_sub1role Pentose phosphate pathway;
tigrfam_target db:TIGRFAMs.hmm|TIGR00232 evalue:2.2e-299 score:993.6 best_domain_score:993.4 name:TIGR00232;
tm_num 1;
18806 20821 transmembrane_helix
ID metaerg.pl|13182
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
topology o20045-20113i;
20825 21178 CDS
ID metaerg.pl|13183
allgo_ids GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002332255;
genomedb_acc GCF_002332255.1;
genomedb_target db:genomedb|GCF_002332255.1|WP_096276154.1 1 115 evalue:8.0e-48 qcov:98.30 identity:93.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF03788;
pfam_desc LrgA family;
pfam_id LrgA;
pfam_target db:Pfam-A.hmm|PF03788.14 evalue:7.4e-15 score:53.9 best_domain_score:53.7 name:LrgA;
tm_num 3;
20825 21178 transmembrane_helix
ID metaerg.pl|13184
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
topology o20867-20962i20999-21067o21077-21145i;
21168 21893 CDS
ID metaerg.pl|13185
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI65193.1 1 241 evalue:1.0e-110 qcov:100.00 identity:91.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF04172;
pfam_desc LrgB-like family;
pfam_id LrgB;
pfam_target db:Pfam-A.hmm|PF04172.16 evalue:1.1e-61 score:207.4 best_domain_score:207.2 name:LrgB;
sprot_desc hypothetical protein;
sprot_id sp|P39590|YWBG_BACSU;
sprot_target db:uniprot_sprot|sp|P39590|YWBG_BACSU 21 231 evalue:5.6e-18 qcov:87.60 identity:31.30;
tm_num 6;
21168 21893 transmembrane_helix
ID metaerg.pl|13186
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
topology o21195-21263i21297-21365o21375-21434i21471-21539o21630-21698i21801-21869o;
21992 23029 CDS
ID metaerg.pl|13187
allec_ids 1.2.1.72;
allgo_ids GO:0016620; GO:0055114; GO:0005737; GO:0048001; GO:0051287; GO:0050661; GO:0006006; GO:0042823; GO:0008615;
allko_ids K00134; K10705; K03472;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ88211.1 1 345 evalue:1.5e-190 qcov:100.00 identity:95.70;
kegg_pathway_id 00750; 00010;
kegg_pathway_name Vitamin B6 metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
metacyc_pathway_id PYRIDOXSYN-PWY; PWY0-845;
metacyc_pathway_name pyridoxal 5'-phosphate biosynthesis I;; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;;
metacyc_pathway_type Vitamin-B6-Biosynthesis;; Super-Pathways; Vitamin-B6-Biosynthesis;;
pfam_acc PF02800; PF00044;
pfam_desc Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain;
pfam_id Gp_dh_C; Gp_dh_N;
pfam_target db:Pfam-A.hmm|PF02800.20 evalue:5.1e-46 score:155.4 best_domain_score:155.0 name:Gp_dh_C; db:Pfam-A.hmm|PF00044.24 evalue:1.4e-37 score:127.3 best_domain_score:126.5 name:Gp_dh_N;
sprot_desc D-erythrose-4-phosphate dehydrogenase;
sprot_id sp|Q3ILL8|E4PD_PSEHT;
sprot_target db:uniprot_sprot|sp|Q3ILL8|E4PD_PSEHT 9 345 evalue:4.5e-106 qcov:97.70 identity:55.90;
23077 24246 CDS
ID metaerg.pl|13188
allec_ids 2.7.2.3;
allgo_ids GO:0004618; GO:0006096; GO:0005737; GO:0005524;
allko_ids K00927;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_050713971.1 1 389 evalue:3.4e-196 qcov:100.00 identity:93.30;
kegg_pathway_id 00010; 00710;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
metacyc_pathway_id CALVIN-PWY; PWY-5484; P461-PWY; GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAGLYCOLYSIS-PWY; PWY-5464; P441-PWY; PWY-1042; ANAEROFRUCAT-PWY; PWY-3801; GLYCOLYSIS; GLYCOLYSIS-E-D; P122-PWY; P124-PWY; P185-PWY; GLUCONEO-PWY; PHOTOALL-PWY;
metacyc_pathway_name Calvin-Benson-Bassham cycle;; glycolysis II (from fructose 6-phosphate);; hexitol fermentation to lactate, formate, ethanol and acetate;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis III (from glucose);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; superpathway of N-acetylneuraminate degradation;; glycolysis IV (plant cytosol);; homolactic fermentation;; sucrose degradation II (sucrose synthase);; glycolysis I (from glucose 6-phosphate);; superpathway of glycolysis and the Entner-Doudoroff pathway;; heterolactic fermentation;; Bifidobacterium shunt;; formaldehyde assimilation III (dihydroxyacetone cycle);; gluconeogenesis I;; oxygenic photosynthesis;;
metacyc_pathway_type Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; GLYCOLYSIS-VARIANTS;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Energy-Metabolism; Super-Pathways;; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Formaldehyde-Assimilation;; Gluconeogenesis;; Photosynthesis; Super-Pathways;;
pfam_acc PF00162;
pfam_desc Phosphoglycerate kinase;
pfam_id PGK;
pfam_target db:Pfam-A.hmm|PF00162.19 evalue:7.6e-142 score:472.0 best_domain_score:471.8 name:PGK;
sprot_desc Phosphoglycerate kinase;
sprot_id sp|Q0VL87|PGK_ALCBS;
sprot_target db:uniprot_sprot|sp|Q0VL87|PGK_ALCBS 1 387 evalue:8.4e-149 qcov:99.50 identity:71.60;
24356 25420 CDS
ID metaerg.pl|13189
allec_ids 4.1.2.13;
allgo_ids GO:0005975; GO:0008270; GO:0016832; GO:0004332; GO:0006096;
allko_ids K01624;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002366715;
genomedb_acc GCA_002366715.1;
genomedb_target db:genomedb|GCA_002366715.1|DFBS01000007.1_21 1 354 evalue:9.7e-198 qcov:100.00 identity:98.00;
kegg_pathway_id 00051; 00710; 00030; 00010;
kegg_pathway_name Fructose and mannose metabolism; Carbon fixation in photosynthetic organisms; Pentose phosphate pathway; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
metacyc_pathway_id P185-PWY; PHOTOALL-PWY; GLUCONEO-PWY; GLYCOLYSIS; PWY-6146; GLYCOLYSIS-E-D; GLYCOLYSIS-TCA-GLYOX-BYPASS; ANAGLYCOLYSIS-PWY; PWY-1861; PWY-5464; PWY-3801; PWY-1042; ANAEROFRUCAT-PWY; P441-PWY; CALVIN-PWY; P341-PWY; PWY-6142; PWY66-373; P461-PWY; PWY-5484;
metacyc_pathway_name formaldehyde assimilation III (dihydroxyacetone cycle);; oxygenic photosynthesis;; gluconeogenesis I;; glycolysis I (from glucose 6-phosphate);; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of glycolysis and the Entner-Doudoroff pathway;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glycolysis III (from glucose);; formaldehyde assimilation II (assimilatory RuMP Cycle);; superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle;; sucrose degradation II (sucrose synthase);; glycolysis IV (plant cytosol);; homolactic fermentation;; superpathway of N-acetylneuraminate degradation;; Calvin-Benson-Bassham cycle;; glycolysis V (Pyrococcus);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; sucrose degradation V (sucrose α-glucosidase);; hexitol fermentation to lactate, formate, ethanol and acetate;; glycolysis II (from fructose 6-phosphate);;
metacyc_pathway_type Formaldehyde-Assimilation;; Photosynthesis; Super-Pathways;; Gluconeogenesis;; GLYCOLYSIS-VARIANTS;; Biosynthesis; Super-Pathways;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism; Super-Pathways;; GLYCOLYSIS-VARIANTS;; Formaldehyde-Assimilation;; Energy-Metabolism; Super-Pathways;; SUCROSE-DEG;; GLYCOLYSIS-VARIANTS;; Fermentation-to-Lactate; Super-Pathways;; CARBOXYLATES-DEG; Super-Pathways;; Autotrophic-CO2-Fixation; CARBO-BIOSYNTHESIS; Photosynthesis;; GLYCOLYSIS-VARIANTS;; Gluconeogenesis; Super-Pathways;; SUCROSE-DEG;; Acetate-Formation; Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation; SUGAR-ALCOHOLS-DEG; Super-Pathways;; GLYCOLYSIS-VARIANTS;;
pfam_acc PF01116;
pfam_desc Fructose-bisphosphate aldolase class-II;
pfam_id F_bP_aldolase;
pfam_target db:Pfam-A.hmm|PF01116.20 evalue:6.2e-92 score:307.2 best_domain_score:307.0 name:F_bP_aldolase;
sprot_desc Fructose-bisphosphate aldolase;
sprot_id sp|Q9I5Y1|ALF_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I5Y1|ALF_PSEAE 1 353 evalue:5.8e-181 qcov:99.70 identity:88.40;
tigrfam_acc TIGR00167; TIGR01521;
tigrfam_desc ketose-bisphosphate aldolase; fructose-bisphosphate aldolase, class II, Calvin cycle subtype;
tigrfam_mainrole Energy metabolism;
tigrfam_name cbbA; FruBisAldo_II_B;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00167 evalue:6.9e-97 score:323.4 best_domain_score:323.2 name:TIGR00167; db:TIGRFAMs.hmm|TIGR01521 evalue:7.8e-205 score:678.8 best_domain_score:678.6 name:TIGR01521;
25597 25947 CDS
ID metaerg.pl|13190
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ88214.1 1 116 evalue:5.8e-51 qcov:100.00 identity:86.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
26376 25969 CDS
ID metaerg.pl|13191
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000014.1_5 1 134 evalue:1.9e-24 qcov:99.30 identity:59.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
sp YES;
25969 26043 signal_peptide
ID metaerg.pl|13192
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
26706 27404 CDS
ID metaerg.pl|13193
allec_ids 3.1.3.18;
allgo_ids GO:0046872; GO:0008967; GO:0005975; GO:0046295;
allko_ids K01091;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071695133.1 1 232 evalue:1.1e-117 qcov:100.00 identity:90.50;
kegg_pathway_id 00630;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
metacyc_pathway_id PWY-181;
metacyc_pathway_name photorespiration;;
metacyc_pathway_type Photosynthesis;;
pfam_acc PF13419; PF00702;
pfam_desc Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase;
pfam_id HAD_2; Hydrolase;
pfam_target db:Pfam-A.hmm|PF13419.6 evalue:4.7e-18 score:65.1 best_domain_score:64.9 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:9.7e-09 score:35.0 best_domain_score:33.1 name:Hydrolase;
sprot_desc Phosphoglycolate phosphatase;
sprot_id sp|Q4K4Z4|GPH_PSEF5;
sprot_target db:uniprot_sprot|sp|Q4K4Z4|GPH_PSEF5 5 229 evalue:3.8e-08 qcov:97.00 identity:28.90;
tigrfam_acc TIGR01509;
tigrfam_desc HAD hydrolase, family IA, variant 3;
tigrfam_mainrole Unknown function;
tigrfam_name HAD-SF-IA-v3;
tigrfam_sub1role Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:1.2e-15 score:57.2 best_domain_score:42.5 name:TIGR01509;
27407 27781 CDS
ID metaerg.pl|13194
allgo_ids GO:0003743; GO:0006413; GO:0043024;
allko_ids K03113;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_027958965.1 1 124 evalue:2.1e-59 qcov:100.00 identity:91.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF01253;
pfam_desc Translation initiation factor SUI1;
pfam_id SUI1;
pfam_target db:Pfam-A.hmm|PF01253.22 evalue:7.3e-17 score:60.9 best_domain_score:60.5 name:SUI1;
sprot_desc hypothetical protein;
sprot_id sp|P08245|YCIH_ECOLI;
sprot_target db:uniprot_sprot|sp|P08245|YCIH_ECOLI 4 124 evalue:1.1e-22 qcov:97.60 identity:50.40;
27840 28748 CDS
ID metaerg.pl|13195
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ88218.1 1 302 evalue:8.4e-158 qcov:100.00 identity:91.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF08378;
pfam_desc Nuclease-related domain;
pfam_id NERD;
pfam_target db:Pfam-A.hmm|PF08378.11 evalue:5.4e-15 score:55.0 best_domain_score:54.3 name:NERD;
sp YES;
tm_num 3;
27840 27899 signal_peptide
ID metaerg.pl|13196
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
27840 28748 transmembrane_helix
ID metaerg.pl|13197
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
topology o27849-27917i28005-28073o28116-28175i;
30091 28760 CDS
ID metaerg.pl|13198
allec_ids 3.1.5.1;
allgo_ids GO:0016793;
allko_ids K01129;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp000235725;
genomedb_acc GCF_000235725.1;
genomedb_target db:genomedb|GCF_000235725.1|WP_008959658.1 1 443 evalue:9.5e-251 qcov:100.00 identity:95.30;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
pfam_acc PF01966;
pfam_desc HD domain;
pfam_id HD;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:9.8e-08 score:31.5 best_domain_score:29.8 name:HD;
sprot_desc Deoxyguanosinetriphosphate triphosphohydrolase-like protein;
sprot_id sp|A6V333|DGTL2_PSEA7;
sprot_target db:uniprot_sprot|sp|A6V333|DGTL2_PSEA7 4 439 evalue:1.5e-146 qcov:98.40 identity:58.50;
tigrfam_acc TIGR01353;
tigrfam_desc putative dGTPase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name dGTP_triPase;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR01353 evalue:2.2e-96 score:322.9 best_domain_score:322.7 name:TIGR01353;
30326 30213 bac_5SrRNA
ID metaerg.pl|13199
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 27.7472; ; ; 27.7472;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CVKH01000045.4542.7021 12 91 evalue:7.97e-25 qcov:70 identity:92.500;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;
>Feature NODE_1860_length_24588_cov_17.6553
166 273 bac_5SrRNA
ID metaerg.pl|13200
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
416 1438 CDS
ID metaerg.pl|13201
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667408.1 2 339 evalue:8.7e-103 qcov:99.40 identity:61.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
2512 1466 CDS
ID metaerg.pl|13202
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441690.1 3 348 evalue:1.8e-151 qcov:99.40 identity:80.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:3.1e-21 score:75.5 best_domain_score:74.7 name:Lactamase_B;
2662 3036 CDS
ID metaerg.pl|13203
allgo_ids GO:0003697;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Dermatophilaceae;g__Janibacter;s__Janibacter melonis;
genomedb_acc GCF_001637565.1;
genomedb_target db:genomedb|GCF_001637565.1|WP_068275776.1 6 119 evalue:6.8e-13 qcov:91.90 identity:47.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF00436;
pfam_desc Single-strand binding protein family;
pfam_id SSB;
pfam_target db:Pfam-A.hmm|PF00436.25 evalue:3.2e-06 score:26.4 best_domain_score:19.9 name:SSB;
4115 3075 CDS
ID metaerg.pl|13204
allgo_ids GO:0016788;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667411.1 3 342 evalue:1.5e-163 qcov:98.30 identity:86.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF04952;
pfam_desc Succinylglutamate desuccinylase / Aspartoacylase family;
pfam_id AstE_AspA;
pfam_target db:Pfam-A.hmm|PF04952.14 evalue:2e-56 score:190.4 best_domain_score:190.2 name:AstE_AspA;
4432 4112 CDS
ID metaerg.pl|13205
allec_ids 6.3.2.-;
allgo_ids GO:0005524; GO:0016874; GO:0046872; GO:0006464; GO:0006412;
allko_ids K05844;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667412.1 1 95 evalue:4.7e-39 qcov:89.60 identity:83.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
metacyc_pathway_id PWY-6455;
metacyc_pathway_name vancomycin resistance II;;
metacyc_pathway_type Cell-Wall-Biosynthesis; Vancomycin-Resistnace;;
pfam_acc PF05618;
pfam_desc Putative ATP-dependant zinc protease;
pfam_id Zn_protease;
pfam_target db:Pfam-A.hmm|PF05618.11 evalue:2.9e-13 score:49.1 best_domain_score:49.0 name:Zn_protease;
sprot_desc Probable alpha-L-glutamate ligase;
sprot_id sp|Q7U6F4|RIMK_SYNPX;
sprot_target db:uniprot_sprot|sp|Q7U6F4|RIMK_SYNPX 2 92 evalue:1.3e-06 qcov:85.80 identity:31.90;
5503 4700 CDS
ID metaerg.pl|13206
allgo_ids GO:0004252; GO:0016021;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667413.1 3 267 evalue:8.9e-111 qcov:99.30 identity:80.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF01694;
pfam_desc Rhomboid family;
pfam_id Rhomboid;
pfam_target db:Pfam-A.hmm|PF01694.22 evalue:1e-35 score:122.2 best_domain_score:119.3 name:Rhomboid;
tm_num 6;
5503 4700 transmembrane_helix
ID metaerg.pl|13207
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
topology i4748-4807o4964-5032i5069-5137o5195-5263i5282-5350o5378-5446i;
5880 5542 CDS
ID metaerg.pl|13208
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667414.1 1 112 evalue:7.4e-43 qcov:100.00 identity:81.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
6003 6779 CDS
ID metaerg.pl|13209
allgo_ids GO:0008703; GO:0009231; GO:0055114;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667415.1 1 255 evalue:1.9e-81 qcov:98.80 identity:67.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF01872;
pfam_desc RibD C-terminal domain;
pfam_id RibD_C;
pfam_target db:Pfam-A.hmm|PF01872.17 evalue:5.8e-33 score:113.6 best_domain_score:113.5 name:RibD_C;
6827 7636 CDS
ID metaerg.pl|13210
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108665676.1 12 254 evalue:4.7e-11 qcov:90.30 identity:37.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
7633 7857 CDS
ID metaerg.pl|13211
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
8023 8691 CDS
ID metaerg.pl|13212
allec_ids 2.1.1.226;
allgo_ids GO:0008168; GO:0032259; GO:0005618; GO:0005737; GO:0005576; GO:0020002; GO:0016020; GO:0003723; GO:0090729; GO:0044179; GO:0006364;
allko_ids K06442;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669758.1 1 219 evalue:1.7e-83 qcov:98.60 identity:74.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF01728;
pfam_desc FtsJ-like methyltransferase;
pfam_id FtsJ;
pfam_target db:Pfam-A.hmm|PF01728.19 evalue:1.5e-16 score:60.3 best_domain_score:60.1 name:FtsJ;
sprot_desc 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA;
sprot_id sp|P9WJ62|TLYA_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WJ62|TLYA_MYCTO 1 215 evalue:1.5e-49 qcov:96.80 identity:51.60;
tigrfam_acc TIGR00478;
tigrfam_desc TlyA family rRNA methyltransferase/putative hemolysin;
tigrfam_mainrole Unknown function;
tigrfam_name tly;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00478 evalue:2.2e-55 score:186.6 best_domain_score:186.4 name:TIGR00478;
8696 9565 CDS
ID metaerg.pl|13213
allec_ids 2.7.1.23;
allgo_ids GO:0003951; GO:0006741; GO:0005737; GO:0005524; GO:0046872; GO:0019674;
allko_ids K00858;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441691.1 1 289 evalue:8.4e-99 qcov:100.00 identity:67.80;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
metacyc_pathway_id PWY-5083; NADPHOS-DEPHOS-PWY;
metacyc_pathway_name NAD/NADH phosphorylation and dephosphorylation;; NAD phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; NAD-Metabolism;;
pfam_acc PF01513;
pfam_desc ATP-NAD kinase;
pfam_id NAD_kinase;
pfam_target db:Pfam-A.hmm|PF01513.21 evalue:3.1e-56 score:190.0 best_domain_score:188.1 name:NAD_kinase;
sprot_desc NAD kinase;
sprot_id sp|Q5YY98|NADK_NOCFA;
sprot_target db:uniprot_sprot|sp|Q5YY98|NADK_NOCFA 5 288 evalue:1.1e-49 qcov:98.30 identity:40.60;
9706 11397 CDS
ID metaerg.pl|13214
allgo_ids GO:0005524; GO:0000724; GO:0009314; GO:0009432;
allko_ids K03631;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441692.1 1 560 evalue:5.5e-203 qcov:99.50 identity:70.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF13401; PF13476; PF02463;
pfam_desc AAA domain; AAA domain; RecF/RecN/SMC N terminal domain;
pfam_id AAA_22; AAA_23; SMC_N;
pfam_target db:Pfam-A.hmm|PF13401.6 evalue:1.5e-06 score:27.7 best_domain_score:18.0 name:AAA_22; db:Pfam-A.hmm|PF13476.6 evalue:1.1e-08 score:35.1 best_domain_score:33.4 name:AAA_23; db:Pfam-A.hmm|PF02463.19 evalue:2.1e-13 score:49.5 best_domain_score:48.9 name:SMC_N;
sprot_desc DNA repair protein RecN;
sprot_id sp|Q9S220|RECN_STRCO;
sprot_target db:uniprot_sprot|sp|Q9S220|RECN_STRCO 5 558 evalue:1.7e-70 qcov:98.40 identity:45.20;
tigrfam_acc TIGR00634;
tigrfam_desc DNA repair protein RecN;
tigrfam_mainrole DNA metabolism;
tigrfam_name recN;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00634 evalue:6.3e-142 score:473.5 best_domain_score:473.3 name:TIGR00634;
11666 13435 CDS
ID metaerg.pl|13215
allec_ids 6.3.4.2;
allgo_ids GO:0003883; GO:0006221; GO:0005524; GO:0046872; GO:0044210; GO:0006541;
allko_ids K01937;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669759.1 1 579 evalue:6.4e-263 qcov:98.30 identity:77.70;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
metacyc_pathway_id PRPP-PWY; PWY0-162; PWY-5687;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;; ;
metacyc_pathway_type Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ;
pfam_acc PF06418; PF00117; PF07722;
pfam_desc CTP synthase N-terminus; Glutamine amidotransferase class-I; Peptidase C26;
pfam_id CTP_synth_N; GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF06418.14 evalue:8.1e-121 score:401.6 best_domain_score:401.2 name:CTP_synth_N; db:Pfam-A.hmm|PF00117.28 evalue:1.6e-50 score:170.8 best_domain_score:170.1 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:9.4e-05 score:21.5 best_domain_score:15.5 name:Peptidase_C26;
sprot_desc CTP synthase;
sprot_id sp|Q3AFT7|PYRG_CARHZ;
sprot_target db:uniprot_sprot|sp|Q3AFT7|PYRG_CARHZ 1 546 evalue:9.9e-202 qcov:92.70 identity:62.30;
tigrfam_acc TIGR00337;
tigrfam_desc CTP synthase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name PyrG;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00337 evalue:7.3e-235 score:779.6 best_domain_score:779.5 name:TIGR00337;
13432 13983 CDS
ID metaerg.pl|13216
allec_ids 3.6.1.13;
allgo_ids GO:0016787; GO:0005829; GO:0047631; GO:0046872; GO:0006753; GO:0019693;
allko_ids K01515;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667420.1 3 182 evalue:1.2e-55 qcov:98.40 identity:61.70;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:1.6e-12 score:46.9 best_domain_score:46.3 name:NUDIX;
sprot_desc ADP-ribose pyrophosphatase;
sprot_id sp|P54570|ADPP_BACSU;
sprot_target db:uniprot_sprot|sp|P54570|ADPP_BACSU 22 174 evalue:2.4e-21 qcov:83.60 identity:37.30;
14009 14959 CDS
ID metaerg.pl|13217
allgo_ids GO:0003677; GO:0006310; GO:0015074; GO:0005737; GO:0009037; GO:0007049; GO:0051301; GO:0007059; GO:0006313;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669760.1 10 316 evalue:8.8e-126 qcov:97.20 identity:74.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF00589; PF02899;
pfam_desc Phage integrase family; Phage integrase, N-terminal SAM-like domain;
pfam_id Phage_integrase; Phage_int_SAM_1;
pfam_target db:Pfam-A.hmm|PF00589.22 evalue:1.2e-43 score:148.1 best_domain_score:147.7 name:Phage_integrase; db:Pfam-A.hmm|PF02899.17 evalue:1.7e-18 score:65.9 best_domain_score:63.9 name:Phage_int_SAM_1;
sprot_desc Tyrosine recombinase XerD;
sprot_id sp|P67637|XERD_MYCBO;
sprot_target db:uniprot_sprot|sp|P67637|XERD_MYCBO 11 312 evalue:5.7e-79 qcov:95.60 identity:53.20;
tigrfam_acc TIGR02225;
tigrfam_desc tyrosine recombinase XerD;
tigrfam_mainrole DNA metabolism;
tigrfam_name recomb_XerD;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02225 evalue:1.9e-100 score:335.1 best_domain_score:334.9 name:TIGR02225;
14991 15344 CDS
ID metaerg.pl|13218
allgo_ids GO:0008270;
allko_ids K11261;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667421.1 1 113 evalue:1.4e-28 qcov:96.60 identity:61.10;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF01258;
pfam_desc Prokaryotic dksA/traR C4-type zinc finger;
pfam_id zf-dskA_traR;
pfam_target db:Pfam-A.hmm|PF01258.17 evalue:8.9e-11 score:40.8 best_domain_score:40.2 name:zf-dskA_traR;
15584 16465 CDS
ID metaerg.pl|13219
allgo_ids GO:0005524; GO:0016491; GO:0055114;
allko_ids K03496;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Glycomyces;s__Glycomyces sp000719515;
genomedb_acc GCF_000719515.1;
genomedb_target db:genomedb|GCF_000719515.1|WP_030159797.1 5 287 evalue:1.9e-90 qcov:96.60 identity:61.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF13614; PF02374; PF01656; PF06564; PF00142; PF09140; PF10609;
pfam_desc AAA domain; Anion-transporting ATPase; CobQ/CobB/MinD/ParA nucleotide binding domain; Cellulose biosynthesis protein BcsQ; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; ATPase MipZ; NUBPL iron-transfer P-loop NTPase;
pfam_id AAA_31; ArsA_ATPase; CbiA; CBP_BcsQ; Fer4_NifH; MipZ; ParA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:3.4e-57 score:192.5 best_domain_score:191.8 name:AAA_31; db:Pfam-A.hmm|PF02374.15 evalue:6.7e-07 score:28.0 best_domain_score:26.8 name:ArsA_ATPase; db:Pfam-A.hmm|PF01656.23 evalue:2.7e-23 score:81.6 best_domain_score:80.9 name:CbiA; db:Pfam-A.hmm|PF06564.12 evalue:3.4e-13 score:48.9 best_domain_score:47.1 name:CBP_BcsQ; db:Pfam-A.hmm|PF00142.18 evalue:7.3e-12 score:44.5 best_domain_score:26.6 name:Fer4_NifH; db:Pfam-A.hmm|PF09140.11 evalue:5.5e-11 score:41.5 best_domain_score:26.1 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:4.8e-09 score:35.2 best_domain_score:33.4 name:ParA;
sprot_desc hypothetical protein;
sprot_id sp|P9WLT0|Y1708_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WLT0|Y1708_MYCTO 20 289 evalue:1.3e-80 qcov:92.20 identity:55.90;
16536 17858 CDS
ID metaerg.pl|13220
allec_ids 2.4.2.2;
allgo_ids GO:0016757; GO:0046872; GO:0004645; GO:0016154; GO:0009032; GO:0006206; GO:0006213;
allko_ids K00766; K00758; K00756; K13497;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667422.1 3 437 evalue:2.1e-162 qcov:98.90 identity:71.30;
kegg_pathway_id 02020; 00983; 00230; 00400; 00240;
kegg_pathway_name Two-component system - General; Drug metabolism - other enzymes; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF00591; PF02885; PF07831;
pfam_desc Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; Pyrimidine nucleoside phosphorylase C-terminal domain;
pfam_id Glycos_transf_3; Glycos_trans_3N; PYNP_C;
pfam_target db:Pfam-A.hmm|PF00591.21 evalue:6e-36 score:123.5 best_domain_score:123.5 name:Glycos_transf_3; db:Pfam-A.hmm|PF02885.17 evalue:6.9e-15 score:53.9 best_domain_score:52.6 name:Glycos_trans_3N; db:Pfam-A.hmm|PF07831.13 evalue:4.4e-15 score:54.3 best_domain_score:53.8 name:PYNP_C;
sprot_desc Pyrimidine-nucleoside phosphorylase;
sprot_id sp|P77836|PDP_GEOSE;
sprot_target db:uniprot_sprot|sp|P77836|PDP_GEOSE 10 435 evalue:2.7e-95 qcov:96.80 identity:47.40;
tigrfam_acc TIGR02644;
tigrfam_desc pyrimidine-nucleoside phosphorylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name Y_phosphoryl;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR02644 evalue:2.2e-143 score:477.2 best_domain_score:477.0 name:TIGR02644;
18356 19159 CDS
ID metaerg.pl|13221
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
tm_num 6;
18356 19159 transmembrane_helix
ID metaerg.pl|13222
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
topology i18503-18571o18614-18682i18695-18763o18773-18841i18899-18997o19025-19093i;
19216 19842 CDS
ID metaerg.pl|13223
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptosporangiales;f__Streptosporangiaceae;g__Spirillospora;s__Spirillospora sp002911665;
genomedb_acc GCF_002911665.1;
genomedb_target db:genomedb|GCF_002911665.1|WP_103562807.1 12 204 evalue:1.9e-12 qcov:92.80 identity:31.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF13559;
pfam_desc Domain of unknown function (DUF4129);
pfam_id DUF4129;
pfam_target db:Pfam-A.hmm|PF13559.6 evalue:2.6e-08 score:33.3 best_domain_score:33.3 name:DUF4129;
tm_num 1;
19216 19842 transmembrane_helix
ID metaerg.pl|13224
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
topology o19387-19446i;
19839 20984 CDS
ID metaerg.pl|13225
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Palsa-688;g__PALSA-693;s__PALSA-693 sp003156595;
genomedb_acc GCA_003156595.1;
genomedb_target db:genomedb|GCA_003156595.1|PMHH01000106.1_27 14 360 evalue:1.4e-37 qcov:91.10 identity:37.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
sp YES;
tm_num 1;
19839 19913 signal_peptide
ID metaerg.pl|13226
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
19839 20984 transmembrane_helix
ID metaerg.pl|13227
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
topology i19857-19916o;
20981 21949 CDS
ID metaerg.pl|13228
allgo_ids GO:0005524; GO:0016887;
allko_ids K03924;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Microtrichaceae;g__UBA11034;s__UBA11034 sp003514205;
genomedb_acc GCA_003514205.1;
genomedb_target db:genomedb|GCA_003514205.1|HBX77390.1 9 322 evalue:8.2e-119 qcov:97.50 identity:70.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF07726; PF07728; PF17863;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); AAA lid domain;
pfam_id AAA_3; AAA_5; AAA_lid_2;
pfam_target db:Pfam-A.hmm|PF07726.11 evalue:8.3e-64 score:212.6 best_domain_score:212.1 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:8.7e-16 score:57.4 best_domain_score:56.7 name:AAA_5; db:Pfam-A.hmm|PF17863.1 evalue:7.4e-20 score:69.8 best_domain_score:69.0 name:AAA_lid_2;
sprot_desc hypothetical protein;
sprot_id sp|P94474|YEAC_BACSU;
sprot_target db:uniprot_sprot|sp|P94474|YEAC_BACSU 19 321 evalue:1.1e-72 qcov:94.10 identity:46.50;
22021 23325 CDS
ID metaerg.pl|13229
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Palsa-688;g__PALSA-693;s__PALSA-693 sp003156595;
genomedb_acc GCA_003156595.1;
genomedb_target db:genomedb|GCA_003156595.1|PMHH01000106.1_25 3 434 evalue:6.9e-113 qcov:99.50 identity:56.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF01882;
pfam_desc Protein of unknown function DUF58;
pfam_id DUF58;
pfam_target db:Pfam-A.hmm|PF01882.18 evalue:3.9e-22 score:77.6 best_domain_score:75.8 name:DUF58;
tm_num 1;
22021 23325 transmembrane_helix
ID metaerg.pl|13230
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
topology i22054-22122o;
24260 23292 CDS
ID metaerg.pl|13231
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Palsa-688;g__PALSA-693;s__PALSA-693 sp003156595;
genomedb_acc GCA_003156595.1;
genomedb_target db:genomedb|GCA_003156595.1|PMHH01000106.1_24 1 306 evalue:4.7e-74 qcov:95.00 identity:49.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
pfam_acc PF01944;
pfam_desc Stage II sporulation protein M;
pfam_id SpoIIM;
pfam_target db:Pfam-A.hmm|PF01944.17 evalue:2e-38 score:131.1 best_domain_score:130.6 name:SpoIIM;
tm_num 6;
24260 23292 transmembrane_helix
ID metaerg.pl|13232
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0272526; ; 25.6749; 0.239872; 25.942;
topology i23544-23612o23712-23780i23799-23858o23886-23954i24015-24083o24096-24164i;
>Feature NODE_1894_length_24309_cov_76.6133
21 1524 bac_23SrRNA
ID metaerg.pl|13233
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
1726 2694 bac_23SrRNA
ID metaerg.pl|13234
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
2967 3053 tRNA
ID metaerg.pl|13235
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
name tRNA_Ser_gct;
3135 3677 CDS
ID metaerg.pl|13236
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
3810 4427 CDS
ID metaerg.pl|13237
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
4469 4542 tRNA
ID metaerg.pl|13238
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
name tRNA_Cys_gca;
4617 4970 CDS
ID metaerg.pl|13239
allgo_ids GO:0003723; GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843; GO:0000049;
allko_ids K02952;
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Chlorophyceae;o__Sphaeropleales;f__Selenastraceae;g__Monoraphidium;s__Monoraphidium neglectum;;
genomedb_acc GCF_000611645.1;
genomedb_target db:genomedb|GCF_000611645.1|XP_013906250.1 8 109 evalue:5.4e-12 qcov:87.20 identity:40.40;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
pfam_acc PF00416;
pfam_desc Ribosomal protein S13/S18;
pfam_id Ribosomal_S13;
pfam_target db:Pfam-A.hmm|PF00416.22 evalue:1.7e-15 score:56.8 best_domain_score:41.3 name:Ribosomal_S13;
sprot_desc 30S ribosomal protein S13;
sprot_id sp|C4K796|RS13_HAMD5;
sprot_target db:uniprot_sprot|sp|C4K796|RS13_HAMD5 18 111 evalue:2.9e-12 qcov:80.30 identity:42.10;
5049 5129 tRNA
ID metaerg.pl|13240
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
name tRNA_Leu_tag;
5225 5719 CDS
ID metaerg.pl|13241
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
pfam_acc PF02326;
pfam_desc Plant ATP synthase F0;
pfam_id YMF19;
pfam_target db:Pfam-A.hmm|PF02326.15 evalue:7.8e-12 score:45.1 best_domain_score:44.1 name:YMF19;
tm_num 1;
5225 5719 transmembrane_helix
ID metaerg.pl|13242
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
topology o5252-5320i;
5942 6169 CDS
ID metaerg.pl|13243
allgo_ids GO:0015078; GO:0033177; GO:0016021; GO:0005753; GO:0000276; GO:0045263; GO:0008289; GO:0046933; GO:0015991; GO:0015986;
allko_ids K03661; K02128; K02155; K02124; K02110; K00872;
genomedb_OC d__Bacteria;p__Myxococcota;c__UBA9160;o__UBA9160;f__UBA4427;g__TMED88;s__TMED88 sp002171515;
genomedb_acc GCA_002171515.1;
genomedb_target db:genomedb|GCA_002171515.1|OUV35063.1 6 73 evalue:4.5e-20 qcov:90.70 identity:88.20;
kegg_pathway_id 00195; 00190; 05012; 00260;
kegg_pathway_name Photosynthesis; Oxidative phosphorylation; Parkinson's disease; Glycine, serine and threonine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
pfam_acc PF00137;
pfam_desc ATP synthase subunit C;
pfam_id ATP-synt_C;
pfam_target db:Pfam-A.hmm|PF00137.21 evalue:9.1e-13 score:47.6 best_domain_score:47.3 name:ATP-synt_C;
sp YES;
sprot_desc ATP synthase F(0) complex subunit C1, mitochondrial;
sprot_id sp|P32876|AT5G1_BOVIN;
sprot_target db:uniprot_sprot|sp|P32876|AT5G1_BOVIN 3 75 evalue:4.6e-19 qcov:97.30 identity:75.30;
tm_num 2;
5942 6001 lipoprotein_signal_peptide
ID metaerg.pl|13244
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
5942 6169 transmembrane_helix
ID metaerg.pl|13245
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
topology o5984-6052i6089-6157o;
6182 6252 tRNA
ID metaerg.pl|13246
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
name tRNA_Val_tac;
6255 6341 tRNA
ID metaerg.pl|13247
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
name tRNA_Ser_tga;
6607 6680 tRNA
ID metaerg.pl|13248
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
name tRNA_Asn_gtt;
7575 8430 bac_16SrRNA
ID metaerg.pl|13249
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
rRNA_target RNA_target=db:silva_SSURef_Nr99.fasta|nohit;
rRNA_taxon unknown;
8459 8528 tRNA
ID metaerg.pl|13250
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
name tRNA_Met_cat;
8738 8810 tRNA
ID metaerg.pl|13251
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
name tRNA_Ala_tgc;
8959 9043 tRNA
ID metaerg.pl|13252
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
name tRNA_Tyr_gta;
9135 10415 CDS
ID metaerg.pl|13253
allgo_ids GO:0009055; GO:0016020; GO:0016491; GO:0016021; GO:0005743; GO:0045275; GO:0046872; GO:0008121; GO:0006122;
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Trebouxiophyceae;o__Chlorellales;f__Chlorellaceae;g__Auxenochlorella;s__Auxenochlorella protothecoides;;
genomedb_acc GCF_000733215.1;
genomedb_target db:genomedb|GCF_000733215.1|XP_011401697.1 43 420 evalue:1.1e-147 qcov:88.70 identity:66.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
pfam_acc PF00033; PF00032; PF13631;
pfam_desc Cytochrome b/b6/petB; Cytochrome b(C-terminal)/b6/petD; Cytochrome b(N-terminal)/b6/petB;
pfam_id Cytochrome_B; Cytochrom_B_C; Cytochrom_B_N_2;
pfam_target db:Pfam-A.hmm|PF00033.19 evalue:1.7e-73 score:245.7 best_domain_score:245.7 name:Cytochrome_B; db:Pfam-A.hmm|PF00032.17 evalue:6.9e-30 score:102.6 best_domain_score:102.6 name:Cytochrom_B_C; db:Pfam-A.hmm|PF13631.6 evalue:4.1e-43 score:146.5 best_domain_score:146.5 name:Cytochrom_B_N_2;
sprot_desc Cytochrome b;
sprot_id sp|P26852|CYB_MARPO;
sprot_target db:uniprot_sprot|sp|P26852|CYB_MARPO 43 424 evalue:5.5e-146 qcov:89.70 identity:65.40;
tm_num 10;
9135 10415 transmembrane_helix
ID metaerg.pl|13254
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
topology i9342-9410o9507-9575i9594-9662o9690-9758i9795-9863o9951-10019i10038-10106o10134-10202i10236-10292o10305-10373i;
10625 10707 tRNA
ID metaerg.pl|13255
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
name tRNA_Lys_ttt;
10899 10972 tRNA
ID metaerg.pl|13256
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
name tRNA_Ile_gat;
11108 11890 CDS
ID metaerg.pl|13257
allec_ids 1.9.3.1;
allgo_ids GO:0015002; GO:0016020; GO:0016021; GO:0005743; GO:0004129; GO:0019646;
genomedb_OC d__Eukaryota;p__Chlorophyta;no__prasinophytes;c__Mamiellophyceae;o__Mamiellales;f__Mamiellaceae;g__Micromonas;s__Micromonas commoda;;
genomedb_acc GCF_000090985.2;
genomedb_target db:genomedb|GCF_000090985.2|YP_002860126.1 1 259 evalue:2.4e-84 qcov:99.60 identity:58.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
metacyc_pathway_id PWY-3781;
metacyc_pathway_name aerobic respiration I (cytochrome c);;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;;
pfam_acc PF00510;
pfam_desc Cytochrome c oxidase subunit III;
pfam_id COX3;
pfam_target db:Pfam-A.hmm|PF00510.18 evalue:4.2e-104 score:347.2 best_domain_score:347.0 name:COX3;
sprot_desc Cytochrome c oxidase subunit 3;
sprot_id sp|P26858|COX3_MARPO;
sprot_target db:uniprot_sprot|sp|P26858|COX3_MARPO 2 259 evalue:1.1e-83 qcov:99.20 identity:57.10;
tm_num 7;
11108 11890 transmembrane_helix
ID metaerg.pl|13258
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
topology i11144-11212o11225-11278i11339-11407o11495-11563i11582-11650o11693-11761i11822-11881o;
11900 12529 CDS
ID metaerg.pl|13259
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
tm_num 3;
11900 12529 transmembrane_helix
ID metaerg.pl|13260
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
topology i11933-12001o12293-12361i12395-12463o;
12535 12927 CDS
ID metaerg.pl|13261
allgo_ids GO:0003735; GO:0005840; GO:0006412;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
pfam_acc PF00238;
pfam_desc Ribosomal protein L14p/L23e;
pfam_id Ribosomal_L14;
pfam_target db:Pfam-A.hmm|PF00238.19 evalue:3.6e-11 score:42.5 best_domain_score:42.3 name:Ribosomal_L14;
12932 13237 CDS
ID metaerg.pl|13262
allec_ids 7.1.1.2;
allgo_ids GO:0016021; GO:0031966; GO:0070469; GO:0016651; GO:0042773;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales_A;f__Magnetovibrionaceae;g__Magnetovibrio;s__Magnetovibrio sp002732845;
genomedb_acc GCA_002732845.1;
genomedb_target db:genomedb|GCA_002732845.1|PHS74192.1 8 101 evalue:9.1e-16 qcov:93.10 identity:46.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
pfam_acc PF00420;
pfam_desc NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
pfam_id Oxidored_q2;
pfam_target db:Pfam-A.hmm|PF00420.24 evalue:3.1e-15 score:54.9 best_domain_score:54.6 name:Oxidored_q2;
sprot_desc NADH-ubiquinone oxidoreductase chain 4L;
sprot_id sp|Q37627|NU4LM_PROWI;
sprot_target db:uniprot_sprot|sp|Q37627|NU4LM_PROWI 12 101 evalue:6.3e-16 qcov:89.10 identity:48.90;
tm_num 3;
12932 13237 transmembrane_helix
ID metaerg.pl|13263
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
topology o12941-13000i13013-13081o13109-13177i;
13375 14154 CDS
ID metaerg.pl|13264
allgo_ids GO:0003735; GO:0005840; GO:0006412;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
pfam_acc PF00189;
pfam_desc Ribosomal protein S3, C-terminal domain;
pfam_id Ribosomal_S3_C;
pfam_target db:Pfam-A.hmm|PF00189.20 evalue:1.5e-09 score:37.5 best_domain_score:36.6 name:Ribosomal_S3_C;
14169 15698 CDS
ID metaerg.pl|13265
allec_ids 7.1.1.2;
allgo_ids GO:0016021; GO:0031966; GO:0070469; GO:0008137; GO:0042773;
genomedb_OC d__Eukaryota;p__Chlorophyta;no__prasinophytes;c__Mamiellophyceae;o__Mamiellales;f__Bathycoccaceae;g__Ostreococcus;s__Ostreococcus tauri;;
genomedb_acc GCF_000214015.3;
genomedb_target db:genomedb|GCF_000214015.3|YP_717299.1 14 507 evalue:2.0e-119 qcov:97.10 identity:47.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:1.4e-69 score:233.8 best_domain_score:232.9 name:Proton_antipo_M;
sprot_desc NADH-ubiquinone oxidoreductase chain 4;
sprot_id sp|P26848|NU4M_MARPO;
sprot_target db:uniprot_sprot|sp|P26848|NU4M_MARPO 19 503 evalue:2.1e-120 qcov:95.30 identity:48.20;
tigrfam_acc TIGR01972;
tigrfam_desc proton-translocating NADH-quinone oxidoreductase, chain M;
tigrfam_mainrole Energy metabolism;
tigrfam_name NDH_I_M;
tigrfam_sub1role Electron transport;
tigrfam_target db:TIGRFAMs.hmm|TIGR01972 evalue:1.2e-137 score:458.7 best_domain_score:458.3 name:TIGR01972;
tm_num 14;
14169 15698 transmembrane_helix
ID metaerg.pl|13266
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
topology o14211-14279i14298-14357o14454-14522i14556-14624o14634-14702i14736-14804o14862-14930i14967-15035o15048-15116i15141-15209o15219-15287i15306-15374o15462-15530i15591-15656o;
15748 15821 tRNA
ID metaerg.pl|13267
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
name tRNA_Met_cat;
16382 16636 CDS
ID metaerg.pl|13268
allgo_ids GO:0004129; GO:0009060; GO:0016021; GO:0020037; GO:0055114; GO:0005751; GO:0004519; GO:0015990; GO:0006314; GO:0006123;
genomedb_OC d__Eukaryota;no__Opisthokonta;p__Basidiomycota;c__Malasseziomycetes;o__Malasseziales;f__Malasseziaceae;g__Malassezia;s__Malassezia pachydermatis;;
genomedb_acc GCF_001278385.1;
genomedb_target db:genomedb|GCF_001278385.1|XP_017990044.1 2 68 evalue:3.6e-18 qcov:79.80 identity:70.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
pfam_acc PF00115;
pfam_desc Cytochrome C and Quinol oxidase polypeptide I;
pfam_id COX1;
pfam_target db:Pfam-A.hmm|PF00115.20 evalue:2.4e-09 score:35.8 best_domain_score:35.6 name:COX1;
sprot_desc Probable intron-encoded endonuclease aI2;
sprot_id sp|Q0H8X8|AI2_USTMA;
sprot_target db:uniprot_sprot|sp|Q0H8X8|AI2_USTMA 2 68 evalue:6.0e-20 qcov:79.80 identity:70.10;
tm_num 2;
16382 16636 transmembrane_helix
ID metaerg.pl|13269
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
topology o16424-16492i16550-16618o;
17035 19044 CDS
ID metaerg.pl|13270
allgo_ids GO:0006397; GO:0046872; GO:0016491; GO:0009820; GO:0019608;
casgene_acc pfam00078_RT_CAS-I:CAS-III;
casgene_name RT;
casgene_target db:casgenes.hmm|pfam00078_RT_CAS-I:CAS-III evalue:3.7e-55 score:186.0 best_domain_score:186.0 name:RT;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Acidovorax_A;s__Acidovorax_A wautersii;
genomedb_acc GCF_900113035.1;
genomedb_target db:genomedb|GCF_900113035.1|WP_092941870.1 61 660 evalue:2.7e-108 qcov:89.70 identity:38.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
pfam_acc PF08388; PF01348; PF00078;
pfam_desc Group II intron, maturase-specific domain; Type II intron maturase; Reverse transcriptase (RNA-dependent DNA polymerase);
pfam_id GIIM; Intron_maturas2; RVT_1;
pfam_target db:Pfam-A.hmm|PF08388.11 evalue:2.6e-08 score:33.1 best_domain_score:30.6 name:GIIM; db:Pfam-A.hmm|PF01348.21 evalue:7.3e-33 score:112.7 best_domain_score:112.7 name:Intron_maturas2; db:Pfam-A.hmm|PF00078.27 evalue:6.3e-30 score:103.6 best_domain_score:101.3 name:RVT_1;
sprot_desc Putative nicotine oxidoreductase;
sprot_id sp|B1N1A3|NICA_PSEPU;
sprot_target db:uniprot_sprot|sp|B1N1A3|NICA_PSEPU 66 664 evalue:2.7e-99 qcov:89.50 identity:37.60;
19072 19563 CDS
ID metaerg.pl|13271
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
tm_num 3;
19072 19563 transmembrane_helix
ID metaerg.pl|13272
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
topology i19132-19200o19243-19311i19372-19440o;
19560 21572 CDS
ID metaerg.pl|13273
allgo_ids GO:0006397; GO:0000262; GO:0003677; GO:0004519; GO:0006315;
casgene_acc pfam00078_RT_CAS-I:CAS-III;
casgene_name RT;
casgene_target db:casgenes.hmm|pfam00078_RT_CAS-I:CAS-III evalue:2.3e-57 score:193.2 best_domain_score:192.4 name:RT;
genomedb_OC d__Eukaryota;no__Opisthokonta;p__Ascomycota;c__Schizosaccharomycetes;o__Schizosaccharomycetales;f__Schizosaccharomycetaceae;g__Schizosaccharomyces;s__Schizosaccharomyces pombe;;
genomedb_acc GCF_000002945.1;
genomedb_target db:genomedb|GCF_000002945.1|NP_039503.1 117 668 evalue:1.4e-125 qcov:82.40 identity:45.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
pfam_acc PF08388; PF01348; PF00078;
pfam_desc Group II intron, maturase-specific domain; Type II intron maturase; Reverse transcriptase (RNA-dependent DNA polymerase);
pfam_id GIIM; Intron_maturas2; RVT_1;
pfam_target db:Pfam-A.hmm|PF08388.11 evalue:3.4e-05 score:23.1 best_domain_score:23.1 name:GIIM; db:Pfam-A.hmm|PF01348.21 evalue:9.8e-26 score:89.6 best_domain_score:88.5 name:Intron_maturas2; db:Pfam-A.hmm|PF00078.27 evalue:1.7e-32 score:112.0 best_domain_score:109.2 name:RVT_1;
sprot_desc Uncharacterized 91 kDa protein in cob intron;
sprot_id sp|P05511|YMC6_SCHPO;
sprot_target db:uniprot_sprot|sp|P05511|YMC6_SCHPO 117 668 evalue:1.1e-127 qcov:82.40 identity:45.70;
24164 23868 CDS
ID metaerg.pl|13274
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 767.943; 0.159278; 0.0120866; 767.771;
>Feature NODE_2264_length_22430_cov_55.3873
1 213 CDS
ID metaerg.pl|13275
allgo_ids GO:0006413; GO:0005737; GO:0003743;
allko_ids K02520;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441683.1 1 68 evalue:1.8e-18 qcov:97.10 identity:76.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
pfam_acc PF00707;
pfam_desc Translation initiation factor IF-3, C-terminal domain;
pfam_id IF3_C;
pfam_target db:Pfam-A.hmm|PF00707.22 evalue:3.1e-18 score:64.7 best_domain_score:64.5 name:IF3_C;
sprot_desc Translation initiation factor IF-3;
sprot_id sp|Q828D2|IF3_STRAW;
sprot_target db:uniprot_sprot|sp|Q828D2|IF3_STRAW 2 69 evalue:1.7e-12 qcov:97.10 identity:55.90;
575 769 CDS
ID metaerg.pl|13276
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02916;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669753.1 1 64 evalue:4.4e-16 qcov:100.00 identity:73.40;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
pfam_acc PF01632;
pfam_desc Ribosomal protein L35;
pfam_id Ribosomal_L35p;
pfam_target db:Pfam-A.hmm|PF01632.19 evalue:1.5e-21 score:75.9 best_domain_score:75.8 name:Ribosomal_L35p;
sprot_desc 50S ribosomal protein L35;
sprot_id sp|Q0RF99|RL35_FRAAA;
sprot_target db:uniprot_sprot|sp|Q0RF99|RL35_FRAAA 1 62 evalue:7.1e-13 qcov:96.90 identity:62.90;
tigrfam_GO GO:0000315;
tigrfam_acc TIGR00001;
tigrfam_desc ribosomal protein bL35;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpmI_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00001 evalue:3.1e-20 score:71.4 best_domain_score:71.3 name:TIGR00001;
811 1179 CDS
ID metaerg.pl|13277
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843; GO:0000027;
allko_ids K02887;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667383.1 1 122 evalue:5.2e-42 qcov:100.00 identity:77.00;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
pfam_acc PF00453;
pfam_desc Ribosomal protein L20;
pfam_id Ribosomal_L20;
pfam_target db:Pfam-A.hmm|PF00453.18 evalue:1.1e-42 score:143.6 best_domain_score:143.5 name:Ribosomal_L20;
sprot_desc 50S ribosomal protein L20;
sprot_id sp|B1VH40|RL20_CORU7;
sprot_target db:uniprot_sprot|sp|B1VH40|RL20_CORU7 1 120 evalue:4.5e-32 qcov:98.40 identity:63.30;
tigrfam_acc TIGR01032;
tigrfam_desc ribosomal protein bL20;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplT_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01032 evalue:1.1e-43 score:147.3 best_domain_score:147.2 name:TIGR01032;
1337 2110 CDS
ID metaerg.pl|13278
allec_ids 2.1.1.-;
allgo_ids GO:0003723; GO:0006396; GO:0008173;
allko_ids K03218; K03437;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667384.1 4 252 evalue:6.4e-58 qcov:96.90 identity:56.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
metacyc_pathway_id PWY-1061; PWY-5876; PWY-5864; PWY-5975; PWY-5729; PWY-6113; PWY-5305; PWYG-321; PWY-1422; PWY-6477; PWY-5467; CODH-PWY; PWY-6575; PWY-6442; PWY-4021; PWY-5041; PWY-6153; PWY-3542; ALL-CHORISMATE-PWY; PWY-5116; PWY-1581; CO2FORM-PWY; PWY-6519; PWY-5773; PWY-5328; METHIONINE-DEG1-PWY; PWY-6427; PWY-6395; PWY-6146; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-6292; PWY-5479; PWY-5987; PWY-6151; PWY-5855; PWY-5209; PWY-6303; PWY-5857; METH-ACETATE-PWY; PWY-6154; PWY-6424; UBISYN-PWY; PWY-6142; PWY-5856;
metacyc_pathway_name homogalacturonan biosynthesis;; magnoflorine biosynthesis;; superpathway of plastoquinol biosynthesis;; furaneol and mesifurane biosynthesis;; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; vitamin E biosynthesis (tocopherols);; gibberellin inactivation II (methylation);; gramine biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; β-alanine betaine biosynthesis;; S-adenosyl-L-methionine cycle II;; autoinducer AI-2 biosynthesis I;; choline biosynthesis II;; superpathway of chorismate metabolism;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; biotin biosynthesis I;; xanthohumol biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; S-adenosyl-L-methionine cycle I;; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; methanogenesis from acetate;; autoinducer AI-2 biosynthesis II (Vibrio);; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ubiquinol-9 biosynthesis (prokaryotic);;
metacyc_pathway_type PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Plastoquinone-Biosynthesis; Super-Pathways;; SECONDARY-METABOLITE-BIOSYNTHESIS;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; Autotrophic-CO2-Fixation;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; S-adenosyl-L-methionine-cycle;; Autoinducer-Biosynthesis;; Choline-Biosynthesis;; Super-Pathways;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Biosynthesis; Super-Pathways;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; CYSTEINE-SYN; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Autoinducer-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Ubiquinone-Biosynthesis;;
pfam_acc PF00588; PF08032;
pfam_desc SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding;
pfam_id SpoU_methylase; SpoU_sub_bind;
pfam_target db:Pfam-A.hmm|PF00588.19 evalue:8.7e-34 score:116.0 best_domain_score:115.5 name:SpoU_methylase; db:Pfam-A.hmm|PF08032.12 evalue:7e-09 score:35.1 best_domain_score:33.3 name:SpoU_sub_bind;
sprot_desc Uncharacterized tRNA/rRNA methyltransferase YsgA;
sprot_id sp|P94538|YSGA_BACSU;
sprot_target db:uniprot_sprot|sp|P94538|YSGA_BACSU 1 248 evalue:1.7e-25 qcov:96.50 identity:34.70;
2107 3138 CDS
ID metaerg.pl|13279
allec_ids 2.7.13.3;
allgo_ids GO:0000155; GO:0007165; GO:0016021; GO:0005886; GO:0005524; GO:0000156; GO:0030295; GO:0007234; GO:0006355;
allko_ids K07642; K11711; K11356; K11640; K02484; K07704; K10909; K08282; K07677; K07708; K07645; K02491; K07643; K11231; K03407; K07637; K07654; K00936; K07682; K07649; K07777; K07652; K07641; K13598; K07646; K07639; K08475; K07673; K07711; K00873; K08884; K13533; K11328; K07778; K11354; K07768; K11633; K07651; K07718; K07698; K07679; K02478; K07648; K07650; K06379; K10681; K07676; K01769; K07644; K07709; K13532; K04757; K11629; K10125; K02476; K11357; K12767; K02486; K11383; K07769; K11520; K14509; K07675; K07717; K07680; K07647; K13040; K10942; K08479; K07674; K10916; K02668; K03388; K07640; K07710; K07656; K01768; K02489; K07697; K07716; K07638; K07653; K07636; K02482; K08801; K14489; K02480; K10715; K07678; K02030; K11527; K13587;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667385.1 6 339 evalue:7.0e-76 qcov:97.40 identity:48.50;
kegg_pathway_id 00620; 03090; 02020; 04011; 00790; 00710; 00010; 05111; 00230;
kegg_pathway_name Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Folate biosynthesis; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Vibrio cholerae pathogenic cycle; Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
pfam_acc PF02518; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.2e-19 score:70.1 best_domain_score:67.7 name:HATPase_c; db:Pfam-A.hmm|PF00512.25 evalue:2.7e-18 score:65.0 best_domain_score:62.9 name:HisKA;
sprot_desc Sensor histidine kinase ResE;
sprot_id sp|P35164|RESE_BACSU;
sprot_target db:uniprot_sprot|sp|P35164|RESE_BACSU 10 320 evalue:1.3e-25 qcov:90.70 identity:27.10;
3299 4300 CDS
ID metaerg.pl|13280
allec_ids 6.1.1.20;
allgo_ids GO:0000166; GO:0004826; GO:0005524; GO:0005737; GO:0006432; GO:0000287; GO:0000049;
allko_ids K01889;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667386.1 1 333 evalue:2.0e-136 qcov:100.00 identity:73.60;
kegg_pathway_id 00970; 00400;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF02912; PF01409;
pfam_desc Aminoacyl tRNA synthetase class II, N-terminal domain; tRNA synthetases class II core domain (F);
pfam_id Phe_tRNA-synt_N; tRNA-synt_2d;
pfam_target db:Pfam-A.hmm|PF02912.18 evalue:4e-20 score:70.8 best_domain_score:70.1 name:Phe_tRNA-synt_N; db:Pfam-A.hmm|PF01409.20 evalue:1.1e-93 score:312.4 best_domain_score:312.2 name:tRNA-synt_2d;
sprot_desc Phenylalanine--tRNA ligase alpha subunit;
sprot_id sp|B1HWA2|SYFA_LYSSC;
sprot_target db:uniprot_sprot|sp|B1HWA2|SYFA_LYSSC 4 333 evalue:1.9e-88 qcov:99.10 identity:50.60;
tigrfam_acc TIGR00468;
tigrfam_desc phenylalanine--tRNA ligase, alpha subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name pheS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00468 evalue:1.1e-92 score:309.9 best_domain_score:303.3 name:TIGR00468;
4452 6947 CDS
ID metaerg.pl|13281
allec_ids 6.1.1.20;
allgo_ids GO:0003723; GO:0004826; GO:0009328; GO:0005524; GO:0000287; GO:0000049; GO:0006432;
allko_ids K01890;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441684.1 1 831 evalue:0.0e+00 qcov:100.00 identity:68.60;
kegg_pathway_id 00970; 00400;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03483; PF03484; PF03147; PF01588; PF17759;
pfam_desc B3/4 domain; tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; Phenylalanyl tRNA synthetase beta chain CLM domain;
pfam_id B3_4; B5; FDX-ACB; tRNA_bind; tRNA_synthFbeta;
pfam_target db:Pfam-A.hmm|PF03483.17 evalue:2.2e-60 score:202.5 best_domain_score:202.0 name:B3_4; db:Pfam-A.hmm|PF03484.15 evalue:4.5e-17 score:61.4 best_domain_score:59.9 name:B5; db:Pfam-A.hmm|PF03147.14 evalue:9.5e-22 score:76.5 best_domain_score:75.1 name:FDX-ACB; db:Pfam-A.hmm|PF01588.20 evalue:3.8e-13 score:48.6 best_domain_score:47.6 name:tRNA_bind; db:Pfam-A.hmm|PF17759.1 evalue:1.1e-42 score:145.2 best_domain_score:144.6 name:tRNA_synthFbeta;
sprot_desc Phenylalanine--tRNA ligase beta subunit;
sprot_id sp|O88054|SYFB_STRCO;
sprot_target db:uniprot_sprot|sp|O88054|SYFB_STRCO 1 830 evalue:3.4e-123 qcov:99.90 identity:39.10;
tigrfam_acc TIGR00472;
tigrfam_desc phenylalanine--tRNA ligase, beta subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name pheT_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00472 evalue:4e-179 score:596.7 best_domain_score:596.5 name:TIGR00472;
9233 7008 CDS
ID metaerg.pl|13282
allgo_ids GO:0016787;
allko_ids K01730; K01303;
genomedb_OC d__Bacteria;p__Chloroflexota_A;c__Ellin6529;o__CSP1-4;f__CSP1-4;g__Fen-1039;s__Fen-1039 sp003158875;
genomedb_acc GCA_003158875.1;
genomedb_target db:genomedb|GCA_003158875.1|PMLK01000015.1_1 10 741 evalue:2.5e-195 qcov:98.80 identity:50.70;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
pfam_acc PF00561; PF05448; PF01738; PF10503; PF07676; PF00326;
pfam_desc alpha/beta hydrolase fold; Acetyl xylan esterase (AXE1); Dienelactone hydrolase family; Esterase PHB depolymerase; WD40-like Beta Propeller Repeat; Prolyl oligopeptidase family;
pfam_id Abhydrolase_1; AXE1; DLH; Esterase_phd; PD40; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:4e-08 score:32.5 best_domain_score:20.3 name:Abhydrolase_1; db:Pfam-A.hmm|PF05448.12 evalue:1.1e-06 score:26.9 best_domain_score:15.6 name:AXE1; db:Pfam-A.hmm|PF01738.18 evalue:0.0001 score:21.2 best_domain_score:19.3 name:DLH; db:Pfam-A.hmm|PF10503.9 evalue:4.9e-08 score:32.0 best_domain_score:30.8 name:Esterase_phd; db:Pfam-A.hmm|PF07676.12 evalue:4.1e-10 score:38.6 best_domain_score:11.8 name:PD40; db:Pfam-A.hmm|PF00326.21 evalue:1.5e-49 score:167.6 best_domain_score:166.8 name:Peptidase_S9;
9291 9713 CDS
ID metaerg.pl|13283
allgo_ids GO:0003747; GO:0006415;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667389.1 1 138 evalue:1.2e-37 qcov:98.60 identity:65.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
pfam_acc PF00472;
pfam_desc RF-1 domain;
pfam_id RF-1;
pfam_target db:Pfam-A.hmm|PF00472.20 evalue:2.1e-19 score:68.8 best_domain_score:68.5 name:RF-1;
9912 10949 CDS
ID metaerg.pl|13284
allec_ids 1.2.1.38;
allgo_ids GO:0016620; GO:0051287; GO:0055114; GO:0005737; GO:0003942; GO:0046983; GO:0006526;
allko_ids K00930; K00618; K00145; K12659; K00133;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441685.1 1 345 evalue:3.2e-137 qcov:100.00 identity:73.10;
kegg_pathway_id 00260; 00300; 00220;
kegg_pathway_name Glycine, serine and threonine metabolism; Lysine biosynthesis; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
metacyc_pathway_id ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; GLUTORN-PWY; ARGSYN-PWY; PWY-5154;
metacyc_pathway_name superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis I;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);;
metacyc_pathway_type Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF01118; PF02774;
pfam_desc Semialdehyde dehydrogenase, NAD binding domain; Semialdehyde dehydrogenase, dimerisation domain;
pfam_id Semialdhyde_dh; Semialdhyde_dhC;
pfam_target db:Pfam-A.hmm|PF01118.24 evalue:1.6e-29 score:102.1 best_domain_score:101.2 name:Semialdhyde_dh; db:Pfam-A.hmm|PF02774.18 evalue:4.4e-15 score:55.5 best_domain_score:54.8 name:Semialdhyde_dhC;
sprot_desc N-acetyl-gamma-glutamyl-phosphate reductase;
sprot_id sp|C6E4S6|ARGC_GEOSM;
sprot_target db:uniprot_sprot|sp|C6E4S6|ARGC_GEOSM 4 345 evalue:6.0e-74 qcov:99.10 identity:46.60;
tigrfam_acc TIGR01850;
tigrfam_desc N-acetyl-gamma-glutamyl-phosphate reductase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argC;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01850 evalue:4.7e-113 score:377.1 best_domain_score:376.9 name:TIGR01850;
10946 12217 CDS
ID metaerg.pl|13285
allec_ids 2.3.1.35; 2.3.1.1; 2.3.1.35 2.3.1.1;
allgo_ids GO:0004358; GO:0006526; GO:0005737; GO:0004042; GO:0103045;
allko_ids K00620;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667394.1 20 423 evalue:1.9e-107 qcov:95.50 identity:54.00;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
metacyc_pathway_id ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; GLUTORN-PWY; ARGSYN-PWY; PWY-5154;
metacyc_pathway_name superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis I;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);;
metacyc_pathway_type Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF01960;
pfam_desc ArgJ family;
pfam_id ArgJ;
pfam_target db:Pfam-A.hmm|PF01960.18 evalue:6.7e-126 score:419.2 best_domain_score:419.0 name:ArgJ;
sprot_desc Arginine biosynthesis bifunctional protein ArgJ;
sprot_id sp|Q8DHN4|ARGJ_THEEB;
sprot_target db:uniprot_sprot|sp|Q8DHN4|ARGJ_THEEB 32 423 evalue:1.5e-71 qcov:92.70 identity:44.00;
tigrfam_acc TIGR00120;
tigrfam_desc glutamate N-acetyltransferase/amino-acid acetyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ArgJ;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00120 evalue:5.8e-105 score:350.5 best_domain_score:350.2 name:TIGR00120;
12274 13326 CDS
ID metaerg.pl|13286
allec_ids 2.7.2.8;
allgo_ids GO:0005737; GO:0003991; GO:0005524; GO:0042450;
allko_ids K00145; K00620; K00931; K01438; K00618; K00619; K12657; K00930; K00928; K00003; K12524; K12659;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441686.1 27 316 evalue:2.7e-123 qcov:82.90 identity:81.00;
kegg_pathway_id 00300; 00260; 00220;
kegg_pathway_name Lysine biosynthesis; Glycine, serine and threonine metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
metacyc_pathway_id ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; GLUTORN-PWY; ARGSYN-PWY; PWY-5154;
metacyc_pathway_name L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; L-ornithine biosynthesis I;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);;
metacyc_pathway_type ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; L-Ornithine-Biosynthesis;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF00696;
pfam_desc Amino acid kinase family;
pfam_id AA_kinase;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:9.5e-43 score:145.7 best_domain_score:145.4 name:AA_kinase;
sprot_desc Acetylglutamate kinase;
sprot_id sp|A4X652|ARGB_SALTO;
sprot_target db:uniprot_sprot|sp|A4X652|ARGB_SALTO 32 317 evalue:4.1e-78 qcov:81.70 identity:54.00;
tigrfam_acc TIGR00761;
tigrfam_desc acetylglutamate kinase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argB;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00761 evalue:1.5e-71 score:239.7 best_domain_score:239.4 name:TIGR00761;
13323 14588 CDS
ID metaerg.pl|13287
allec_ids 2.6.1.11;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0003992; GO:0006526;
allko_ids K00818; K05830; K00821;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441687.1 22 419 evalue:2.4e-171 qcov:94.50 identity:78.10;
kegg_pathway_id 00220; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
metacyc_pathway_id PWY-5154; ARGSYN-PWY; GLUTORN-PWY; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY;
metacyc_pathway_name L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);; L-ornithine biosynthesis I;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);;
metacyc_pathway_type ARGININE-SYN;; ARGININE-SYN; Super-Pathways;; L-Ornithine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF00155; PF00202;
pfam_desc Aminotransferase class I and II; Aminotransferase class-III;
pfam_id Aminotran_1_2; Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:7e-05 score:21.4 best_domain_score:19.5 name:Aminotran_1_2; db:Pfam-A.hmm|PF00202.21 evalue:1.1e-103 score:346.3 best_domain_score:346.0 name:Aminotran_3;
sprot_desc Acetylornithine aminotransferase;
sprot_id sp|A0QYS9|ARGD_MYCS2;
sprot_target db:uniprot_sprot|sp|A0QYS9|ARGD_MYCS2 25 414 evalue:6.4e-94 qcov:92.60 identity:50.30;
tigrfam_acc TIGR00707;
tigrfam_desc transaminase, acetylornithine/succinylornithine family;
tigrfam_name argD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00707 evalue:1.1e-134 score:448.1 best_domain_score:448.0 name:TIGR00707;
14615 15136 CDS
ID metaerg.pl|13288
allgo_ids GO:0003700; GO:0006355; GO:0006525; GO:0005737; GO:0034618; GO:0003677; GO:0006526; GO:0051259;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667396.1 4 152 evalue:1.4e-37 qcov:86.10 identity:59.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
pfam_acc PF01316; PF02863;
pfam_desc Arginine repressor, DNA binding domain; Arginine repressor, C-terminal domain;
pfam_id Arg_repressor; Arg_repressor_C;
pfam_target db:Pfam-A.hmm|PF01316.21 evalue:2.1e-19 score:68.3 best_domain_score:67.2 name:Arg_repressor; db:Pfam-A.hmm|PF02863.18 evalue:6.7e-19 score:66.8 best_domain_score:66.3 name:Arg_repressor_C;
sprot_desc Arginine repressor;
sprot_id sp|P0A4Y9|ARGR_MYCBO;
sprot_target db:uniprot_sprot|sp|P0A4Y9|ARGR_MYCBO 2 144 evalue:8.0e-27 qcov:82.70 identity:48.60;
15171 16391 CDS
ID metaerg.pl|13289
allec_ids 6.3.4.5;
allgo_ids GO:0004055; GO:0005524; GO:0006526; GO:0005737;
allko_ids K01940; K01955;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667397.1 1 400 evalue:4.8e-201 qcov:98.50 identity:84.80;
kegg_pathway_id 00330; 00251; 00252; 00220; 00240;
kegg_pathway_name Arginine and proline metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
metacyc_pathway_id PWY-4984; PWY-5004; ARGININE-SYN4-PWY; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; PWY-5; PWY-5154; PWY-4983; ARGSYN-PWY;
metacyc_pathway_name urea cycle;; superpathway of L-citrulline metabolism;; L-ornithine biosynthesis II;; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; canavanine biosynthesis;; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type NITROGEN-DEG;; Citrulline-Biosynthesis; Super-Pathways;; L-Ornithine-Biosynthesis;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; ARGININE-SYN;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF00764;
pfam_desc Arginosuccinate synthase;
pfam_id Arginosuc_synth;
pfam_target db:Pfam-A.hmm|PF00764.19 evalue:6.5e-166 score:551.6 best_domain_score:551.4 name:Arginosuc_synth;
sprot_desc Argininosuccinate synthase;
sprot_id sp|Q2J866|ASSY_FRACC;
sprot_target db:uniprot_sprot|sp|Q2J866|ASSY_FRACC 5 398 evalue:5.3e-146 qcov:97.00 identity:64.20;
tigrfam_acc TIGR00032;
tigrfam_desc argininosuccinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argG;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00032 evalue:9.3e-147 score:488.6 best_domain_score:488.4 name:TIGR00032;
16462 17208 CDS
ID metaerg.pl|13290
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp000192415;
genomedb_acc GCA_000192415.1;
genomedb_target db:genomedb|GCA_000192415.1|EGD42664.1 6 247 evalue:5.7e-11 qcov:97.60 identity:28.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
pfam_acc PF18029;
pfam_desc Glyoxalase-like domain;
pfam_id Glyoxalase_6;
pfam_target db:Pfam-A.hmm|PF18029.1 evalue:1.1e-21 score:76.8 best_domain_score:43.0 name:Glyoxalase_6;
17341 18768 CDS
ID metaerg.pl|13291
allec_ids 4.3.2.1;
allgo_ids GO:0005737; GO:0004056; GO:0042450;
allko_ids K01857; K01756; K01744; K01679; K01755;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667400.1 1 474 evalue:1.8e-215 qcov:99.80 identity:81.80;
kegg_pathway_id 00252; 00220; 00330; 00362; 00910; 00720; 00020; 00230;
kegg_pathway_name Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Arginine and proline metabolism; Benzoate degradation via hydroxylation; Nitrogen metabolism; Reductive carboxylate cycle (CO2 fixation); Citrate cycle (TCA cycle); Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
metacyc_pathway_id ARGSYN-PWY; PWY-5154; PWY-4983; PWY-5004; PWY-4984; ARGININE-SYN4-PWY; ARGSYNBSUB-PWY; PWY-5; ARG+POLYAMINE-SYN;
metacyc_pathway_name L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; nitric oxide biosynthesis II (mammals);; superpathway of L-citrulline metabolism;; urea cycle;; L-ornithine biosynthesis II;; L-arginine biosynthesis II (acetyl cycle);; canavanine biosynthesis;; superpathway of arginine and polyamine biosynthesis;;
metacyc_pathway_type ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; Citrulline-Biosynthesis; Super-Pathways;; NITROGEN-DEG;; L-Ornithine-Biosynthesis;; ARGININE-SYN;; NON-PROTEIN-AMINO-ACID-SYN;; Polyamine-Biosynthesis; Super-Pathways;;
pfam_acc PF14698; PF00206;
pfam_desc Argininosuccinate lyase C-terminal; Lyase;
pfam_id ASL_C2; Lyase_1;
pfam_target db:Pfam-A.hmm|PF14698.6 evalue:6.5e-22 score:77.3 best_domain_score:76.1 name:ASL_C2; db:Pfam-A.hmm|PF00206.20 evalue:8.8e-62 score:208.5 best_domain_score:204.6 name:Lyase_1;
sprot_desc Argininosuccinate lyase;
sprot_id sp|Q2J867|ARLY_FRACC;
sprot_target db:uniprot_sprot|sp|Q2J867|ARLY_FRACC 17 467 evalue:1.6e-130 qcov:94.90 identity:57.00;
tigrfam_acc TIGR00838;
tigrfam_desc argininosuccinate lyase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argH;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00838 evalue:7.7e-162 score:538.6 best_domain_score:538.4 name:TIGR00838;
18854 20614 CDS
ID metaerg.pl|13292
allec_ids 2.7.7.7; 3.1.11.1;
allgo_ids GO:0003677; GO:0003887; GO:0008852; GO:0046872; GO:0006281; GO:0006260;
allko_ids K04486; K02347;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667402.1 1 584 evalue:4.1e-225 qcov:99.70 identity:68.20;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
pfam_acc PF14791; PF00633; PF12836; PF14520; PF14716; PF02811;
pfam_desc DNA polymerase beta thumb ; Helix-hairpin-helix motif; Helix-hairpin-helix motif; Helix-hairpin-helix domain; Helix-hairpin-helix domain; PHP domain;
pfam_id DNA_pol_B_thumb; HHH; HHH_3; HHH_5; HHH_8; PHP;
pfam_target db:Pfam-A.hmm|PF14791.6 evalue:4e-20 score:71.0 best_domain_score:69.9 name:DNA_pol_B_thumb; db:Pfam-A.hmm|PF00633.23 evalue:4.1e-06 score:25.6 best_domain_score:11.8 name:HHH; db:Pfam-A.hmm|PF12836.7 evalue:2.1e-06 score:27.1 best_domain_score:15.9 name:HHH_3; db:Pfam-A.hmm|PF14520.6 evalue:6.8e-14 score:51.5 best_domain_score:38.8 name:HHH_5; db:Pfam-A.hmm|PF14716.6 evalue:7.9e-21 score:73.4 best_domain_score:63.7 name:HHH_8; db:Pfam-A.hmm|PF02811.19 evalue:4.6e-06 score:26.2 best_domain_score:24.8 name:PHP;
sprot_desc DNA polymerase/3'-5' exonuclease PolX;
sprot_id sp|P94544|POLX_BACSU;
sprot_target db:uniprot_sprot|sp|P94544|POLX_BACSU 7 580 evalue:2.1e-95 qcov:98.00 identity:36.90;
20611 21375 CDS
ID metaerg.pl|13293
allec_ids 3.2.2.-;
allgo_ids GO:0003677; GO:0003905; GO:0006284;
allko_ids K03652;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669755.1 15 246 evalue:1.2e-53 qcov:91.30 identity:56.00;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
metacyc_pathway_id PWY-5381; PWY-2681;
metacyc_pathway_name pyridine nucleotide cycling (plants);; trans-zeatin biosynthesis;;
metacyc_pathway_type NAD-Metabolism;; CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF02245;
pfam_desc Methylpurine-DNA glycosylase (MPG);
pfam_id Pur_DNA_glyco;
pfam_target db:Pfam-A.hmm|PF02245.16 evalue:8.6e-45 score:151.5 best_domain_score:147.4 name:Pur_DNA_glyco;
sp YES;
tigrfam_acc TIGR00567;
tigrfam_desc DNA-3-methyladenine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name 3mg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00567 evalue:3.4e-39 score:133.5 best_domain_score:126.0 name:TIGR00567;
20611 20745 signal_peptide
ID metaerg.pl|13294
Note TAT;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
22072 22429 bac_16SrRNA
ID metaerg.pl|13295
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 94.315; 2.13667; 0.708618; 89.2778; 2.19201;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|DQ432396.1.1501 5 358 evalue:2.49e-171 qcov:99 identity:97.472;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;Nitriliruptoraceae;
>Feature NODE_2993_length_19396_cov_43.0945
2 1090 bac_23SrRNA
ID metaerg.pl|13296
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP007029.532007.534913 1 1089 evalue:0.0 qcov:100 identity:97.800;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Ectothiorhodospirales;Ectothiorhodospiraceae;Thioalkalivibrio;
1195 1308 bac_5SrRNA
ID metaerg.pl|13297
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
2149 1385 CDS
ID metaerg.pl|13298
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B paradoxus;
genomedb_acc GCF_000227685.2;
genomedb_target db:genomedb|GCF_000227685.2|WP_006746080.1 1 254 evalue:8.2e-106 qcov:100.00 identity:72.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF00753; PF12706; PF13483;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2; Lactamase_B_3;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:6.6e-18 score:64.7 best_domain_score:64.0 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:6.3e-20 score:70.8 best_domain_score:70.2 name:Lactamase_B_2; db:Pfam-A.hmm|PF13483.6 evalue:9.8e-06 score:24.8 best_domain_score:24.2 name:Lactamase_B_3;
3527 2361 CDS
ID metaerg.pl|13299
allko_ids K07287;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_043739855.1 14 388 evalue:2.6e-151 qcov:96.60 identity:73.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF06804;
pfam_desc NlpB/DapX lipoprotein;
pfam_id Lipoprotein_18;
pfam_target db:Pfam-A.hmm|PF06804.11 evalue:9.6e-36 score:122.7 best_domain_score:122.3 name:Lipoprotein_18;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|Q9JZR5|Y928_NEIMB;
sprot_target db:uniprot_sprot|sp|Q9JZR5|Y928_NEIMB 11 388 evalue:1.6e-38 qcov:97.40 identity:32.00;
tm_num 1;
2361 2447 lipoprotein_signal_peptide
ID metaerg.pl|13300
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
3527 2361 transmembrane_helix
ID metaerg.pl|13301
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
topology i2397-2465o;
4411 3527 CDS
ID metaerg.pl|13302
allec_ids 4.3.3.7;
allgo_ids GO:0016829; GO:0005737; GO:0008840; GO:0019877; GO:0009089;
allko_ids K01714;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B paradoxus;
genomedb_acc GCF_000227685.2;
genomedb_target db:genomedb|GCF_000227685.2|WP_006746078.1 1 293 evalue:7.2e-138 qcov:99.70 identity:82.60;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF00701;
pfam_desc Dihydrodipicolinate synthetase family;
pfam_id DHDPS;
pfam_target db:Pfam-A.hmm|PF00701.22 evalue:2.5e-103 score:344.0 best_domain_score:343.9 name:DHDPS;
sprot_desc 4-hydroxy-tetrahydrodipicolinate synthase;
sprot_id sp|B8GN57|DAPA_THISH;
sprot_target db:uniprot_sprot|sp|B8GN57|DAPA_THISH 1 293 evalue:5.0e-114 qcov:99.70 identity:71.00;
tigrfam_acc TIGR00674;
tigrfam_desc 4-hydroxy-tetrahydrodipicolinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapA;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00674 evalue:9.1e-110 score:365.1 best_domain_score:365.0 name:TIGR00674;
4690 5202 CDS
ID metaerg.pl|13303
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_043739854.1 1 170 evalue:5.5e-74 qcov:100.00 identity:82.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF01842; PF13291; PF13740;
pfam_desc ACT domain; ACT domain; ACT domain;
pfam_id ACT; ACT_4; ACT_6;
pfam_target db:Pfam-A.hmm|PF01842.25 evalue:1e-08 score:34.0 best_domain_score:24.1 name:ACT; db:Pfam-A.hmm|PF13291.6 evalue:1.1e-06 score:28.4 best_domain_score:13.5 name:ACT_4; db:Pfam-A.hmm|PF13740.6 evalue:2.2e-16 score:58.8 best_domain_score:43.8 name:ACT_6;
5258 5725 CDS
ID metaerg.pl|13304
allec_ids 1.11.1.15;
allgo_ids GO:0016209; GO:0016491; GO:0055114; GO:0005737; GO:0008379; GO:0045454; GO:0034599;
allko_ids K00430; K11065; K13279; K11188; K03564; K11185; K03386; K11186;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_015260172.1 1 153 evalue:3.2e-68 qcov:98.70 identity:83.70;
kegg_pathway_id 00480; 00360; 00940; 00680;
kegg_pathway_name Glutathione metabolism; Phenylalanine metabolism; Phenylpropanoid biosynthesis; Methane metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF00578; PF05988; PF08534;
pfam_desc AhpC/TSA family; Bacterial protein of unknown function (DUF899); Redoxin;
pfam_id AhpC-TSA; DUF899; Redoxin;
pfam_target db:Pfam-A.hmm|PF00578.21 evalue:2.6e-31 score:107.4 best_domain_score:107.2 name:AhpC-TSA; db:Pfam-A.hmm|PF05988.12 evalue:3.9e-05 score:22.5 best_domain_score:22.4 name:DUF899; db:Pfam-A.hmm|PF08534.10 evalue:6.1e-16 score:57.7 best_domain_score:57.5 name:Redoxin;
sprot_desc Peroxiredoxin Bcp;
sprot_id sp|Q8P9V9|BCP_XANCP;
sprot_target db:uniprot_sprot|sp|Q8P9V9|BCP_XANCP 12 154 evalue:6.3e-39 qcov:92.30 identity:56.60;
5756 7174 CDS
ID metaerg.pl|13305
allgo_ids GO:0005524; GO:0005829;
allko_ids K07175;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_015260171.1 1 472 evalue:1.8e-247 qcov:100.00 identity:89.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF13604; PF02562; PF13638;
pfam_desc AAA domain; PhoH-like protein; PIN domain;
pfam_id AAA_30; PhoH; PIN_4;
pfam_target db:Pfam-A.hmm|PF13604.6 evalue:9.8e-08 score:31.2 best_domain_score:29.6 name:AAA_30; db:Pfam-A.hmm|PF02562.16 evalue:8.5e-55 score:184.6 best_domain_score:184.0 name:PhoH; db:Pfam-A.hmm|PF13638.6 evalue:1.7e-40 score:137.6 best_domain_score:136.7 name:PIN_4;
sprot_desc hypothetical protein;
sprot_id sp|O07635|YLAK_BACSU;
sprot_target db:uniprot_sprot|sp|O07635|YLAK_BACSU 9 469 evalue:1.4e-78 qcov:97.70 identity:38.50;
7624 7226 CDS
ID metaerg.pl|13306
allec_ids 4.1.2.50;
allgo_ids GO:0070497; GO:0003874; GO:0046872; GO:0008616; GO:0006729;
allko_ids K01737;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio;s__Thioalkalivibrio sp000381945;
genomedb_acc GCF_000381945.1;
genomedb_target db:genomedb|GCF_000381945.1|WP_019643201.1 1 125 evalue:1.5e-55 qcov:94.70 identity:81.60;
kegg_pathway_id 00790;
kegg_pathway_name Folate biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF01242;
pfam_desc 6-pyruvoyl tetrahydropterin synthase;
pfam_id PTPS;
pfam_target db:Pfam-A.hmm|PF01242.19 evalue:1.1e-39 score:134.4 best_domain_score:134.2 name:PTPS;
sprot_desc 6-carboxy-5,6,7,8-tetrahydropterin synthase;
sprot_id sp|P44123|QUED_HAEIN;
sprot_target db:uniprot_sprot|sp|P44123|QUED_HAEIN 13 125 evalue:8.9e-10 qcov:85.60 identity:31.60;
tigrfam_acc TIGR03367;
tigrfam_desc queuosine biosynthesis protein QueD;
tigrfam_mainrole Protein synthesis;
tigrfam_name queuosine_QueD;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR03367 evalue:1.9e-31 score:107.5 best_domain_score:107.2 name:TIGR03367;
9545 7629 CDS
ID metaerg.pl|13307
allec_ids 2.2.1.7;
allgo_ids GO:0008661; GO:0016114; GO:0000287; GO:0030976; GO:0052865; GO:0009228;
allko_ids K00163; K00615; K01662;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_043739853.1 1 637 evalue:9.9e-302 qcov:99.80 identity:81.20;
kegg_pathway_id 01051; 00252; 00620; 00650; 00290; 00030; 00710; 00010; 00020; 00100;
kegg_pathway_name Biosynthesis of ansamycins; Alanine and aspartate metabolism; Pyruvate metabolism; Butanoate metabolism; Valine, leucine and isoleucine biosynthesis; Pentose phosphate pathway; Carbon fixation in photosynthetic organisms; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Biosynthesis of steroids;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
metacyc_pathway_id PWY-6270; NONMEVIPP-PWY; THISYN-PWY; PYRIDOXSYN-PWY; PWY-5121; PWY0-845;
metacyc_pathway_name isoprene biosynthesis I;; methylerythritol phosphate pathway I;; superpathway of thiamine diphosphate biosynthesis I;; pyridoxal 5'-phosphate biosynthesis I;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; superpathway of pyridoxal 5'-phosphate biosynthesis and salvage;;
metacyc_pathway_type ISOPRENOIDS; Super-Pathways;; MEP-Pathways;; Super-Pathways; Thiamine-Biosynthesis;; Vitamin-B6-Biosynthesis;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; Super-Pathways; Vitamin-B6-Biosynthesis;;
pfam_acc PF13292; PF00676; PF02775; PF02780; PF00456; PF02779;
pfam_desc 1-deoxy-D-xylulose-5-phosphate synthase; Dehydrogenase E1 component; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Transketolase, C-terminal domain; Transketolase, thiamine diphosphate binding domain; Transketolase, pyrimidine binding domain;
pfam_id DXP_synthase_N; E1_dh; TPP_enzyme_C; Transketolase_C; Transketolase_N; Transket_pyr;
pfam_target db:Pfam-A.hmm|PF13292.6 evalue:6.2e-120 score:398.7 best_domain_score:396.9 name:DXP_synthase_N; db:Pfam-A.hmm|PF00676.20 evalue:5.2e-06 score:24.8 best_domain_score:24.3 name:E1_dh; db:Pfam-A.hmm|PF02775.21 evalue:5.4e-05 score:22.3 best_domain_score:20.9 name:TPP_enzyme_C; db:Pfam-A.hmm|PF02780.20 evalue:5.7e-26 score:90.1 best_domain_score:88.7 name:Transketolase_C; db:Pfam-A.hmm|PF00456.21 evalue:1.5e-06 score:26.6 best_domain_score:24.6 name:Transketolase_N; db:Pfam-A.hmm|PF02779.24 evalue:1.5e-37 score:128.2 best_domain_score:126.9 name:Transket_pyr;
sprot_desc 1-deoxy-D-xylulose-5-phosphate synthase;
sprot_id sp|B8GN62|DXS_THISH;
sprot_target db:uniprot_sprot|sp|B8GN62|DXS_THISH 5 623 evalue:1.3e-252 qcov:97.00 identity:68.20;
tigrfam_acc TIGR00204;
tigrfam_desc 1-deoxy-D-xylulose-5-phosphate synthase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name dxs;
tigrfam_sub1role Thiamine;
tigrfam_target db:TIGRFAMs.hmm|TIGR00204 evalue:3.6e-263 score:873.8 best_domain_score:873.5 name:TIGR00204;
10571 9693 CDS
ID metaerg.pl|13308
allec_ids 2.5.1.10;
allgo_ids GO:0008299; GO:0005829; GO:0004161; GO:0004337; GO:0046872; GO:0045337; GO:0033384;
allko_ids K00795;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B paradoxus;
genomedb_acc GCF_000227685.2;
genomedb_target db:genomedb|GCF_000227685.2|WP_006746073.1 1 292 evalue:2.1e-121 qcov:100.00 identity:78.80;
kegg_pathway_id 00100; 00900;
kegg_pathway_name Biosynthesis of steroids; Terpenoid biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
metacyc_pathway_id PWY-5121; PWY-5123; PWY-5910; POLYISOPRENSYN-PWY; PWY-6146;
metacyc_pathway_name superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);; trans, trans-farnesyl diphosphate biosynthesis;; superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate);; polyisoprenoid biosynthesis (E. coli);; Methanobacterium thermoautotrophicum biosynthetic metabolism;;
metacyc_pathway_type DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; All-Trans-Farnesyl-PP-Biosynthesis;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;; Polyprenyl-Biosynthesis; Super-Pathways;; Biosynthesis; Super-Pathways;;
pfam_acc PF00348;
pfam_desc Polyprenyl synthetase;
pfam_id polyprenyl_synt;
pfam_target db:Pfam-A.hmm|PF00348.17 evalue:4.6e-56 score:188.9 best_domain_score:188.7 name:polyprenyl_synt;
sprot_desc Farnesyl diphosphate synthase;
sprot_id sp|P22939|ISPA_ECOLI;
sprot_target db:uniprot_sprot|sp|P22939|ISPA_ECOLI 4 290 evalue:1.9e-68 qcov:98.30 identity:50.20;
10874 10587 CDS
ID metaerg.pl|13309
allec_ids 3.1.11.6;
allgo_ids GO:0006308; GO:0008855; GO:0009318;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_043739852.1 5 95 evalue:1.3e-27 qcov:95.80 identity:71.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF02609;
pfam_desc Exonuclease VII small subunit;
pfam_id Exonuc_VII_S;
pfam_target db:Pfam-A.hmm|PF02609.16 evalue:4e-21 score:74.1 best_domain_score:73.8 name:Exonuc_VII_S;
tigrfam_acc TIGR01280;
tigrfam_desc exodeoxyribonuclease VII, small subunit;
tigrfam_mainrole DNA metabolism;
tigrfam_name xseB;
tigrfam_sub1role Degradation of DNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR01280 evalue:9.6e-22 score:76.0 best_domain_score:75.8 name:TIGR01280;
11092 11511 CDS
ID metaerg.pl|13310
allgo_ids GO:0006879; GO:0008199; GO:0005737; GO:0005506; GO:0016491;
allko_ids K00532;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B paradoxus;
genomedb_acc GCF_000227685.2;
genomedb_target db:genomedb|GCF_000227685.2|WP_006746070.1 1 139 evalue:6.1e-71 qcov:100.00 identity:95.70;
kegg_pathway_id 00630; 00680;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; Methane metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF00210; PF02915;
pfam_desc Ferritin-like domain; Rubrerythrin;
pfam_id Ferritin; Rubrerythrin;
pfam_target db:Pfam-A.hmm|PF00210.24 evalue:1.4e-12 score:47.0 best_domain_score:24.2 name:Ferritin; db:Pfam-A.hmm|PF02915.17 evalue:1.6e-29 score:102.2 best_domain_score:100.4 name:Rubrerythrin;
sprot_desc Rubrerythrin;
sprot_id sp|P24931|RUBY_DESVH;
sprot_target db:uniprot_sprot|sp|P24931|RUBY_DESVH 3 130 evalue:1.5e-23 qcov:92.10 identity:47.40;
11600 12946 CDS
ID metaerg.pl|13311
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_015260166.1 1 448 evalue:6.9e-249 qcov:100.00 identity:90.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF02754;
pfam_desc Cysteine-rich domain;
pfam_id CCG;
pfam_target db:Pfam-A.hmm|PF02754.16 evalue:8.8e-14 score:50.7 best_domain_score:36.9 name:CCG;
13147 13449 CDS
ID metaerg.pl|13312
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B paradoxus;
genomedb_acc GCF_000227685.2;
genomedb_target db:genomedb|GCF_000227685.2|WP_006746068.1 1 100 evalue:1.5e-47 qcov:100.00 identity:95.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
tigrfam_acc TIGR04535;
tigrfam_desc ferritin-like protein;
tigrfam_name ferrit_encaps;
tigrfam_target db:TIGRFAMs.hmm|TIGR04535 evalue:1.4e-39 score:133.8 best_domain_score:133.7 name:TIGR04535;
13490 14083 CDS
ID metaerg.pl|13313
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_015260164.1 1 197 evalue:5.6e-94 qcov:100.00 identity:86.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF12007;
pfam_desc Protein of unknown function (DUF3501);
pfam_id DUF3501;
pfam_target db:Pfam-A.hmm|PF12007.8 evalue:1.1e-73 score:246.5 best_domain_score:246.3 name:DUF3501;
15720 14368 CDS
ID metaerg.pl|13314
allec_ids 3.6.4.-;
allgo_ids GO:0003678; GO:0005524; GO:0006260; GO:0003684; GO:0008094; GO:0046872; GO:0000725;
allko_ids K04485;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_015260163.1 1 450 evalue:1.2e-224 qcov:100.00 identity:88.90;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF13481; PF06745; PF13541; PF03796; PF05362; PF08423; PF00154; PF18073;
pfam_desc AAA domain; KaiC; Subunit ChlI of Mg-chelatase; DnaB-like helicase C terminal domain; Lon protease (S16) C-terminal proteolytic domain; Rad51; recA bacterial DNA recombination protein; Rubredoxin metal binding domain;
pfam_id AAA_25; ATPase; ChlI; DnaB_C; Lon_C; Rad51; RecA; Rubredoxin_2;
pfam_target db:Pfam-A.hmm|PF13481.6 evalue:3.3e-14 score:52.2 best_domain_score:49.4 name:AAA_25; db:Pfam-A.hmm|PF06745.13 evalue:9.6e-19 score:66.9 best_domain_score:43.1 name:ATPase; db:Pfam-A.hmm|PF13541.6 evalue:5.1e-08 score:32.0 best_domain_score:30.5 name:ChlI; db:Pfam-A.hmm|PF03796.15 evalue:2.6e-05 score:22.9 best_domain_score:21.0 name:DnaB_C; db:Pfam-A.hmm|PF05362.13 evalue:1.3e-05 score:24.1 best_domain_score:22.6 name:Lon_C; db:Pfam-A.hmm|PF08423.11 evalue:5.3e-08 score:31.7 best_domain_score:24.5 name:Rad51; db:Pfam-A.hmm|PF00154.21 evalue:6.4e-05 score:21.8 best_domain_score:21.2 name:RecA; db:Pfam-A.hmm|PF18073.1 evalue:3.6e-12 score:45.0 best_domain_score:44.5 name:Rubredoxin_2;
sprot_desc DNA repair protein RadA;
sprot_id sp|P96963|RADA_PSEAE;
sprot_target db:uniprot_sprot|sp|P96963|RADA_PSEAE 1 450 evalue:3.3e-157 qcov:100.00 identity:63.40;
tigrfam_acc TIGR00416;
tigrfam_desc DNA repair protein RadA;
tigrfam_mainrole DNA metabolism;
tigrfam_name sms;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00416 evalue:1.8e-186 score:619.5 best_domain_score:619.3 name:TIGR00416;
17000 15720 CDS
ID metaerg.pl|13315
allgo_ids GO:0016021; GO:0005886; GO:0050660;
allko_ids K01697;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_015260162.1 1 426 evalue:4.7e-207 qcov:100.00 identity:88.30;
kegg_pathway_id 00260; 00271; 00450;
kegg_pathway_name Glycine, serine and threonine metabolism; Methionine metabolism; Selenoamino acid metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF00571; PF03471; PF01595;
pfam_desc CBS domain; Transporter associated domain; Cyclin M transmembrane N-terminal domain;
pfam_id CBS; CorC_HlyC; DUF21;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:9.8e-13 score:47.6 best_domain_score:25.3 name:CBS; db:Pfam-A.hmm|PF03471.17 evalue:8.3e-17 score:60.2 best_domain_score:58.2 name:CorC_HlyC; db:Pfam-A.hmm|PF01595.20 evalue:4.8e-45 score:152.6 best_domain_score:151.8 name:DUF21;
sprot_desc hypothetical protein;
sprot_id sp|Q57017|Y107_HAEIN;
sprot_target db:uniprot_sprot|sp|Q57017|Y107_HAEIN 1 414 evalue:2.0e-103 qcov:97.20 identity:45.50;
tm_num 4;
17000 15720 transmembrane_helix
ID metaerg.pl|13316
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
topology o15729-15797i15903-15971o15999-16067i16101-16169o;
17826 17026 CDS
ID metaerg.pl|13317
allgo_ids GO:0017004; GO:0020037; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_015260161.1 1 266 evalue:7.0e-116 qcov:100.00 identity:83.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF01578;
pfam_desc Cytochrome C assembly protein;
pfam_id Cytochrom_C_asm;
pfam_target db:Pfam-A.hmm|PF01578.20 evalue:1.7e-26 score:92.5 best_domain_score:92.5 name:Cytochrom_C_asm;
sprot_desc Inner membrane protein YpjD;
sprot_id sp|P64434|YPJD_ECO57;
sprot_target db:uniprot_sprot|sp|P64434|YPJD_ECO57 35 262 evalue:1.5e-16 qcov:85.70 identity:31.50;
tm_num 8;
17826 17026 transmembrane_helix
ID metaerg.pl|13318
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
topology i17029-17097o17140-17196i17215-17283o17293-17352i17389-17457o17548-17616i17653-17721o17734-17802i;
17921 19312 CDS
ID metaerg.pl|13319
allgo_ids GO:0005525; GO:0006614; GO:0048500; GO:0008312; GO:0003924;
allko_ids K03106;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Thioalkalivibrionaceae;g__Thioalkalivibrio_B;s__Thioalkalivibrio_B nitratireducens;
genomedb_acc GCF_000321415.2;
genomedb_target db:genomedb|GCF_000321415.2|WP_015260160.1 1 463 evalue:1.0e-223 qcov:100.00 identity:89.80;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0336; 62.427; 56.8178; 171.426; 40.1474;
pfam_acc PF13401; PF01656; PF02492; PF00448; PF02881; PF02978; PF06414;
pfam_desc AAA domain; CobQ/CobB/MinD/ParA nucleotide binding domain; CobW/HypB/UreG, nucleotide-binding domain; SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; Zeta toxin;
pfam_id AAA_22; CbiA; cobW; SRP54; SRP54_N; SRP_SPB; Zeta_toxin;
pfam_target db:Pfam-A.hmm|PF13401.6 evalue:3.2e-07 score:29.9 best_domain_score:28.3 name:AAA_22; db:Pfam-A.hmm|PF01656.23 evalue:2e-07 score:30.4 best_domain_score:28.6 name:CbiA; db:Pfam-A.hmm|PF02492.19 evalue:4.1e-06 score:25.7 best_domain_score:23.5 name:cobW; db:Pfam-A.hmm|PF00448.22 evalue:1.4e-73 score:245.9 best_domain_score:245.2 name:SRP54; db:Pfam-A.hmm|PF02881.19 evalue:6e-22 score:76.9 best_domain_score:75.8 name:SRP54_N; db:Pfam-A.hmm|PF02978.19 evalue:3.8e-32 score:110.1 best_domain_score:108.1 name:SRP_SPB; db:Pfam-A.hmm|PF06414.12 evalue:6.7e-06 score:24.7 best_domain_score:23.3 name:Zeta_toxin;
sprot_desc Signal recognition particle protein;
sprot_id sp|P0AGD9|SRP54_ECO57;
sprot_target db:uniprot_sprot|sp|P0AGD9|SRP54_ECO57 1 442 evalue:2.2e-164 qcov:95.50 identity:67.40;
tigrfam_acc TIGR00959;
tigrfam_desc signal recognition particle protein;
tigrfam_mainrole Protein fate;
tigrfam_name ffh;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00959 evalue:2.9e-173 score:575.7 best_domain_score:575.6 name:TIGR00959;
>Feature NODE_3181_length_18771_cov_26.3764
1571 960 CDS
ID metaerg.pl|13320
allgo_ids GO:0005887; GO:0009055; GO:0010181; GO:0020037; GO:0046872; GO:0030091;
allko_ids K00529; K17247;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp002282555;
genomedb_acc GCA_002282555.1;
genomedb_target db:genomedb|GCA_002282555.1|OZB13572.1 1 203 evalue:2.5e-89 qcov:100.00 identity:81.80;
kegg_pathway_id 00071; 00360;
kegg_pathway_name Fatty acid metabolism; Phenylalanine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
pfam_acc PF01794;
pfam_desc Ferric reductase like transmembrane component;
pfam_id Ferric_reduct;
pfam_target db:Pfam-A.hmm|PF01794.19 evalue:7.6e-19 score:67.3 best_domain_score:67.3 name:Ferric_reduct;
sprot_desc Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;
sprot_id sp|P58769|MSRQ_AGRFC;
sprot_target db:uniprot_sprot|sp|P58769|MSRQ_AGRFC 15 203 evalue:5.9e-45 qcov:93.10 identity:46.90;
tm_num 6;
1571 960 transmembrane_helix
ID metaerg.pl|13321
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
topology i996-1064o1107-1175i1200-1268o1311-1379i1416-1463o1473-1541i;
2480 1575 CDS
ID metaerg.pl|13322
allec_ids 1.8.5.-;
allgo_ids GO:0042128; GO:0042597; GO:0046872; GO:0043546; GO:0016672; GO:0030091;
allko_ids K00387; K00360; K07147;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp002282555;
genomedb_acc GCA_002282555.1;
genomedb_target db:genomedb|GCA_002282555.1|OZB13573.1 1 301 evalue:1.3e-163 qcov:100.00 identity:89.40;
kegg_pathway_id 00910; 00920;
kegg_pathway_name Nitrogen metabolism; Sulfur metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
metacyc_pathway_id P222-PWY; PWY-5294;
metacyc_pathway_name sulfide oxidation I (sulfide-quinone reductase);; superpathway of sulfide oxidation (Acidithiobacillus ferrooxidans);;
metacyc_pathway_type CHEMOAUTOTROPHIC-ENERGY-METABOLISM; Sulfide-Oxidation;; Sulfide-Oxidation; Super-Pathways;;
pfam_acc PF00174;
pfam_desc Oxidoreductase molybdopterin binding domain;
pfam_id Oxidored_molyb;
pfam_target db:Pfam-A.hmm|PF00174.19 evalue:2.9e-32 score:110.9 best_domain_score:110.4 name:Oxidored_molyb;
sp YES;
sprot_desc Protein-methionine-sulfoxide reductase catalytic subunit MsrP;
sprot_id sp|Q5LNE0|MSRP_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LNE0|MSRP_RUEPO 1 301 evalue:1.5e-137 qcov:100.00 identity:73.40;
1575 1706 signal_peptide
ID metaerg.pl|13323
Note TAT;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
2822 3301 CDS
ID metaerg.pl|13324
allgo_ids GO:0005615; GO:0030288;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp002282555;
genomedb_acc GCA_002282555.1;
genomedb_target db:genomedb|GCA_002282555.1|OZB18198.1 1 159 evalue:6.8e-58 qcov:100.00 identity:77.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
pfam_acc PF02469;
pfam_desc Fasciclin domain;
pfam_id Fasciclin;
pfam_target db:Pfam-A.hmm|PF02469.22 evalue:2.2e-37 score:127.4 best_domain_score:127.0 name:Fasciclin;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P74615|Y1483_SYNY3;
sprot_target db:uniprot_sprot|sp|P74615|Y1483_SYNY3 6 158 evalue:4.9e-31 qcov:96.20 identity:50.60;
2822 2884 signal_peptide
ID metaerg.pl|13325
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
4071 3415 CDS
ID metaerg.pl|13326
allec_ids 2.1.1.305;
allgo_ids GO:0046872; GO:0008168; GO:0017000; GO:0032259;
allko_ids K19567;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__UBA3077;s__UBA3077 sp003228875;
genomedb_acc GCA_003228875.1;
genomedb_target db:genomedb|GCA_003228875.1|QIGK01000039.1_12 5 218 evalue:4.3e-79 qcov:98.20 identity:63.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
pfam_acc PF13578;
pfam_desc Methyltransferase domain;
pfam_id Methyltransf_24;
pfam_target db:Pfam-A.hmm|PF13578.6 evalue:8.7e-09 score:35.6 best_domain_score:34.9 name:Methyltransf_24;
sprot_desc 8-demethyl-8-alpha-L-rhamnosyl tetracenomycin-C 2'-O-methyltransferase;
sprot_id sp|Q9AJU2|ELMM1_STROV;
sprot_target db:uniprot_sprot|sp|Q9AJU2|ELMM1_STROV 21 205 evalue:4.4e-30 qcov:84.90 identity:38.10;
6885 4267 CDS
ID metaerg.pl|13327
allgo_ids GO:0005524; GO:0005737; GO:0019538; GO:0042026; GO:0009408;
allko_ids K03695;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp002282555;
genomedb_acc GCA_002282555.1;
genomedb_target db:genomedb|GCA_002282555.1|OZB18204.1 15 872 evalue:0.0e+00 qcov:98.40 identity:95.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
pfam_acc PF00004; PF13191; PF07724; PF13401; PF07728; PF17871; PF10431; PF02861; PF01695; PF05496; PF00158; PF05621;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA ATPase domain; AAA domain (Cdc48 subfamily); AAA domain; AAA domain (dynein-related subfamily); AAA lid domain; C-terminal, D2-small domain, of ClpB protein ; Clp amino terminal domain, pathogenicity island component; IstB-like ATP binding protein; Holliday junction DNA helicase RuvB P-loop domain; Sigma-54 interaction domain; Bacterial TniB protein;
pfam_id AAA; AAA_16; AAA_2; AAA_22; AAA_5; AAA_lid_9; ClpB_D2-small; Clp_N; IstB_IS21; RuvB_N; Sigma54_activat; TniB;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:6.2e-24 score:84.1 best_domain_score:45.9 name:AAA; db:Pfam-A.hmm|PF13191.6 evalue:1.2e-10 score:41.3 best_domain_score:22.0 name:AAA_16; db:Pfam-A.hmm|PF07724.14 evalue:2.4e-56 score:189.7 best_domain_score:182.8 name:AAA_2; db:Pfam-A.hmm|PF13401.6 evalue:6e-08 score:32.3 best_domain_score:14.9 name:AAA_22; db:Pfam-A.hmm|PF07728.14 evalue:4.2e-18 score:64.9 best_domain_score:45.9 name:AAA_5; db:Pfam-A.hmm|PF17871.1 evalue:1.8e-36 score:123.5 best_domain_score:123.5 name:AAA_lid_9; db:Pfam-A.hmm|PF10431.9 evalue:1.9e-26 score:91.2 best_domain_score:89.7 name:ClpB_D2-small; db:Pfam-A.hmm|PF02861.20 evalue:2.9e-20 score:71.4 best_domain_score:41.6 name:Clp_N; db:Pfam-A.hmm|PF01695.17 evalue:9.5e-08 score:31.2 best_domain_score:14.8 name:IstB_IS21; db:Pfam-A.hmm|PF05496.12 evalue:1.8e-05 score:23.8 best_domain_score:10.2 name:RuvB_N; db:Pfam-A.hmm|PF00158.26 evalue:3.4e-08 score:32.6 best_domain_score:21.1 name:Sigma54_activat; db:Pfam-A.hmm|PF05621.11 evalue:4.6e-06 score:25.4 best_domain_score:17.1 name:TniB;
sprot_desc Chaperone protein ClpB;
sprot_id sp|Q7CEG6|CLPB_BRUSU;
sprot_target db:uniprot_sprot|sp|Q7CEG6|CLPB_BRUSU 1 852 evalue:0.0e+00 qcov:97.70 identity:71.90;
tigrfam_acc TIGR03346;
tigrfam_desc ATP-dependent chaperone protein ClpB;
tigrfam_mainrole Protein fate;
tigrfam_name chaperone_ClpB;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR03346 evalue:0 score:1357.6 best_domain_score:1357.4 name:TIGR03346;
8017 7235 CDS
ID metaerg.pl|13328
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp002282555;
genomedb_acc GCA_002282555.1;
genomedb_target db:genomedb|GCA_002282555.1|OZB13544.1 1 256 evalue:4.9e-138 qcov:98.50 identity:88.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
8145 8846 CDS
ID metaerg.pl|13329
allec_ids 4.1.1.23;
allgo_ids GO:0004590; GO:0006207; GO:0044205;
allko_ids K01591; K13421;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp002282555;
genomedb_acc GCA_002282555.1;
genomedb_target db:genomedb|GCA_002282555.1|OZB13543.1 4 233 evalue:1.7e-113 qcov:98.70 identity:93.50;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
metacyc_pathway_id PWY-5686; PRPP-PWY; PWY0-162;
metacyc_pathway_name UMP biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;;
metacyc_pathway_type UMP-Biosynthesis;; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF00215;
pfam_desc Orotidine 5'-phosphate decarboxylase / HUMPS family;
pfam_id OMPdecase;
pfam_target db:Pfam-A.hmm|PF00215.24 evalue:1.2e-40 score:138.7 best_domain_score:138.5 name:OMPdecase;
sprot_desc Orotidine 5'-phosphate decarboxylase;
sprot_id sp|Q5LND3|PYRF_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LND3|PYRF_RUEPO 4 230 evalue:1.0e-101 qcov:97.40 identity:84.10;
tigrfam_acc TIGR01740;
tigrfam_desc orotidine 5'-phosphate decarboxylase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name pyrF;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01740 evalue:5.4e-46 score:156.1 best_domain_score:156.0 name:TIGR01740;
9141 8866 CDS
ID metaerg.pl|13330
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068288608.1 2 91 evalue:7.1e-36 qcov:98.90 identity:91.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
tm_num 2;
9141 8866 transmembrane_helix
ID metaerg.pl|13331
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
topology i8884-8952o8965-9069i;
10028 9141 CDS
ID metaerg.pl|13332
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068287908.1 1 295 evalue:8.8e-136 qcov:100.00 identity:90.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
pfam_acc PF01145;
pfam_desc SPFH domain / Band 7 family;
pfam_id Band_7;
pfam_target db:Pfam-A.hmm|PF01145.25 evalue:2e-29 score:102.1 best_domain_score:102.1 name:Band_7;
tm_num 2;
10028 9141 transmembrane_helix
ID metaerg.pl|13333
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
topology o9153-9221i9279-9338o;
10544 10110 CDS
ID metaerg.pl|13334
allgo_ids GO:0016787;
allko_ids K03574; K08310;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068287909.1 1 139 evalue:1.4e-57 qcov:96.50 identity:77.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:1.5e-13 score:50.1 best_domain_score:49.8 name:NUDIX;
10603 11856 CDS
ID metaerg.pl|13335
allec_ids 2.7.7.7;
allgo_ids GO:0006281; GO:0005737; GO:0003684; GO:0003887; GO:0000287; GO:0006261; GO:0009432;
allko_ids K03515; K02346;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068287911.1 1 417 evalue:5.6e-221 qcov:100.00 identity:93.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
pfam_acc PF00817; PF11799;
pfam_desc impB/mucB/samB family; impB/mucB/samB family C-terminal domain;
pfam_id IMS; IMS_C;
pfam_target db:Pfam-A.hmm|PF00817.20 evalue:1.1e-46 score:157.8 best_domain_score:157.1 name:IMS; db:Pfam-A.hmm|PF11799.8 evalue:1.3e-20 score:73.5 best_domain_score:69.8 name:IMS_C;
sprot_desc DNA polymerase IV 1;
sprot_id sp|Q92QM8|DPO41_RHIME;
sprot_target db:uniprot_sprot|sp|Q92QM8|DPO41_RHIME 5 413 evalue:4.5e-124 qcov:98.10 identity:58.00;
12721 11861 CDS
ID metaerg.pl|13336
allko_ids K01458;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp002282555;
genomedb_acc GCA_002282555.1;
genomedb_target db:genomedb|GCA_002282555.1|OZB15184.1 5 286 evalue:6.1e-142 qcov:98.60 identity:87.90;
kegg_pathway_id 00340; 00630;
kegg_pathway_name Histidine metabolism; Glyoxylate and dicarboxylate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
pfam_acc PF05013;
pfam_desc N-formylglutamate amidohydrolase;
pfam_id FGase;
pfam_target db:Pfam-A.hmm|PF05013.12 evalue:5.4e-68 score:228.6 best_domain_score:228.4 name:FGase;
12873 12947 tRNA
ID metaerg.pl|13337
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
name tRNA_Val_gac;
14517 13297 CDS
ID metaerg.pl|13338
allec_ids 6.2.1.30;
allgo_ids GO:0005524; GO:0016405; GO:0047475; GO:0010124;
allko_ids K01912;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068287915.1 1 406 evalue:9.7e-210 qcov:100.00 identity:91.10;
kegg_pathway_id 00360;
kegg_pathway_name Phenylalanine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
metacyc_pathway_id PWY0-321; PWY-6071; BENZCOA-PWY;
metacyc_pathway_name phenylacetate degradation I (aerobic);; superpathway of phenylethylamine degradation;; anaerobic aromatic compound degradation (Thauera aromatica);;
metacyc_pathway_type Phenylacetate-Degradation;; AMINE-DEG; Phenolic-Compounds-Degradation; Super-Pathways;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;;
sprot_desc Phenylacetate-coenzyme A ligase;
sprot_id sp|P76085|PAAK_ECOLI;
sprot_target db:uniprot_sprot|sp|P76085|PAAK_ECOLI 6 361 evalue:6.5e-19 qcov:87.70 identity:28.10;
15390 14566 CDS
ID metaerg.pl|13339
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0015658; GO:0042941; GO:0015808;
allko_ids K02023; K11962; K01995; K10111; K01998; K06861; K01996; K11072; K02045; K02010; K01997; K02006; K02052; K02017;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068287919.1 1 274 evalue:1.8e-146 qcov:100.00 identity:96.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:1.9e-12 score:46.8 best_domain_score:26.0 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.2e-24 score:86.6 best_domain_score:86.1 name:ABC_tran;
sprot_desc High-affinity branched-chain amino acid transport ATP-binding protein BraG;
sprot_id sp|P21630|BRAG_PSEAE;
sprot_target db:uniprot_sprot|sp|P21630|BRAG_PSEAE 11 251 evalue:1.3e-47 qcov:88.00 identity:45.50;
16796 15513 CDS
ID metaerg.pl|13340
allko_ids K01999;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius marisflavi;
genomedb_acc GCF_900142625.1;
genomedb_target db:genomedb|GCF_900142625.1|WP_073198696.1 1 426 evalue:6.4e-212 qcov:99.80 identity:83.10;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
pfam_acc PF13458;
pfam_desc Periplasmic binding protein;
pfam_id Peripla_BP_6;
pfam_target db:Pfam-A.hmm|PF13458.6 evalue:1.2e-69 score:234.8 best_domain_score:234.5 name:Peripla_BP_6;
sp YES;
15513 15575 signal_peptide
ID metaerg.pl|13341
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
17948 16872 CDS
ID metaerg.pl|13342
allgo_ids GO:0016020; GO:0022857; GO:0055085;
allko_ids K01998; K01995;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius pacificus;
genomedb_acc GCF_900142665.1;
genomedb_target db:genomedb|GCF_900142665.1|WP_073034460.1 1 358 evalue:3.9e-178 qcov:100.00 identity:87.70;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:1.3e-32 score:112.3 best_domain_score:111.9 name:BPD_transp_2;
tm_num 10;
17948 16872 transmembrane_helix
ID metaerg.pl|13343
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
topology i16950-17003o17016-17084i17097-17165o17175-17243i17262-17315o17415-17483i17580-17648o17661-17729i17748-17807o17835-17903i;
18771 18130 CDS
ID metaerg.pl|13344
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0006865;
allko_ids K02057; K01997; K01995; K01998;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__EhC02;s__EhC02 sp001650895;
genomedb_acc GCF_001650895.1;
genomedb_target db:genomedb|GCF_001650895.1|WP_068287934.1 1 213 evalue:8.9e-106 qcov:100.00 identity:93.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
pfam_acc PF02653;
pfam_desc Branched-chain amino acid transport system / permease component;
pfam_id BPD_transp_2;
pfam_target db:Pfam-A.hmm|PF02653.16 evalue:6.7e-17 score:60.8 best_domain_score:60.4 name:BPD_transp_2;
sprot_desc High-affinity branched-chain amino acid transport system permease protein LivH;
sprot_id sp|P0A2J2|LIVH_SALTI;
sprot_target db:uniprot_sprot|sp|P0A2J2|LIVH_SALTI 2 213 evalue:1.8e-12 qcov:99.50 identity:28.50;
tm_num 5;
18771 18130 transmembrane_helix
ID metaerg.pl|13345
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.4261; 0.187799; 0.615542; 35.2514; 0.371355;
topology i18133-18201o18310-18363i18445-18513o18556-18624i18658-18726o;
>Feature NODE_3798_length_17023_cov_12.0159
1 929 bac_23SrRNA
ID metaerg.pl|13346
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JZEL01000013.64921.67857 1 928 evalue:0.0 qcov:99 identity:92.911;
rRNA_taxon Bacteria;Patescibacteria;Parcubacteria;OLB19;
1089 1165 tRNA
ID metaerg.pl|13347
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
name tRNA_Pro_cgg;
1262 1360 bac_5SrRNA
ID metaerg.pl|13348
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
1751 3187 CDS
ID metaerg.pl|13349
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001781415;
genomedb_acc GCA_001781415.1;
genomedb_target db:genomedb|GCA_001781415.1|OGG70219.1 1 478 evalue:2.7e-158 qcov:100.00 identity:56.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
pfam_acc PF00092; PF13519;
pfam_desc von Willebrand factor type A domain; von Willebrand factor type A domain;
pfam_id VWA; VWA_2;
pfam_target db:Pfam-A.hmm|PF00092.28 evalue:7.1e-19 score:68.0 best_domain_score:67.3 name:VWA; db:Pfam-A.hmm|PF13519.6 evalue:9.3e-15 score:54.4 best_domain_score:53.6 name:VWA_2;
tm_num 1;
1751 3187 transmembrane_helix
ID metaerg.pl|13350
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
topology i1787-1855o;
3238 4353 CDS
ID metaerg.pl|13351
allec_ids 2.4.1.129;
allgo_ids GO:0016021; GO:0051301; GO:0005887; GO:0008955; GO:0071555; GO:0009252; GO:0008360;
allko_ids K05837;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002477545;
genomedb_acc GCA_002477545.1;
genomedb_target db:genomedb|GCA_002477545.1|DLQJ01000024.1_4 1 360 evalue:2.4e-138 qcov:97.00 identity:69.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
metacyc_pathway_id PWY-6470; PWY-6471; PEPTIDOGLYCANSYN-PWY; PWY-5265; PWY-6385;
metacyc_pathway_name peptidoglycan biosynthesis V (β-lactam resistance);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis II (staphylococci);; peptidoglycan biosynthesis III (mycobacteria);;
metacyc_pathway_type Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF01098;
pfam_desc Cell cycle protein;
pfam_id FTSW_RODA_SPOVE;
pfam_target db:Pfam-A.hmm|PF01098.19 evalue:5.7e-90 score:301.1 best_domain_score:300.9 name:FTSW_RODA_SPOVE;
sprot_desc Peptidoglycan glycosyltransferase MrdB;
sprot_id sp|P0ABG8|RODA_ECO57;
sprot_target db:uniprot_sprot|sp|P0ABG8|RODA_ECO57 20 359 evalue:2.2e-45 qcov:91.60 identity:35.50;
tigrfam_acc TIGR02210;
tigrfam_desc rod shape-determining protein RodA;
tigrfam_mainrole Cellular processes;
tigrfam_name rodA_shape;
tigrfam_sub1role Cell division;
tigrfam_target db:TIGRFAMs.hmm|TIGR02210 evalue:1.1e-105 score:352.8 best_domain_score:352.6 name:TIGR02210;
tm_num 10;
3238 4353 transmembrane_helix
ID metaerg.pl|13352
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
topology i3274-3336o3364-3432i3451-3519o3547-3600i3637-3696o3706-3765i3778-3837o4042-4110i4129-4197o4225-4293i;
5513 4359 CDS
ID metaerg.pl|13353
allko_ids K13003; K12989; K00712; K00749; K13677; K08256; K03844; K02844; K13668; K12996; K03857; K03429; K00703; K02840;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001781415;
genomedb_acc GCA_001781415.1;
genomedb_target db:genomedb|GCA_001781415.1|OGG70217.1 7 382 evalue:3.1e-117 qcov:97.90 identity:58.80;
kegg_pathway_id 00561; 01031; 00510; 01030; 00500; 00540;
kegg_pathway_name Glycerolipid metabolism; Glycan structures - biosynthesis 2; N-Glycan biosynthesis; Glycan structures - biosynthesis 1; Starch and sucrose metabolism; Lipopolysaccharide biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
pfam_acc PF00534; PF13439; PF13692; PF13477; PF13579;
pfam_desc Glycosyl transferases group 1; Glycosyltransferase Family 4; Glycosyl transferases group 1; Glycosyl transferase 4-like; Glycosyl transferase 4-like domain;
pfam_id Glycos_transf_1; Glyco_transf_4; Glyco_trans_1_4; Glyco_trans_4_2; Glyco_trans_4_4;
pfam_target db:Pfam-A.hmm|PF00534.20 evalue:2e-34 score:117.8 best_domain_score:117.0 name:Glycos_transf_1; db:Pfam-A.hmm|PF13439.6 evalue:6e-24 score:84.2 best_domain_score:83.2 name:Glyco_transf_4; db:Pfam-A.hmm|PF13692.6 evalue:4.9e-27 score:94.2 best_domain_score:93.4 name:Glyco_trans_1_4; db:Pfam-A.hmm|PF13477.6 evalue:4.5e-12 score:45.4 best_domain_score:43.6 name:Glyco_trans_4_2; db:Pfam-A.hmm|PF13579.6 evalue:2.1e-18 score:66.5 best_domain_score:65.1 name:Glyco_trans_4_4;
5813 7204 CDS
ID metaerg.pl|13354
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG87778.1 1 463 evalue:2.2e-181 qcov:100.00 identity:66.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
pfam_acc PF02397;
pfam_desc Bacterial sugar transferase;
pfam_id Bac_transf;
pfam_target db:Pfam-A.hmm|PF02397.16 evalue:1.3e-49 score:167.5 best_domain_score:166.7 name:Bac_transf;
tm_num 5;
5813 7204 transmembrane_helix
ID metaerg.pl|13355
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
topology i5846-5914o5942-6001i6062-6118o6131-6190i6602-6670o;
7278 8360 CDS
ID metaerg.pl|13356
allgo_ids GO:0003854; GO:0006694; GO:0016616; GO:0055114;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG87777.1 1 355 evalue:4.3e-169 qcov:98.60 identity:80.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
pfam_acc PF01073; PF01370; PF07993;
pfam_desc 3-beta hydroxysteroid dehydrogenase/isomerase family; NAD dependent epimerase/dehydratase family; Male sterility protein;
pfam_id 3Beta_HSD; Epimerase; NAD_binding_4;
pfam_target db:Pfam-A.hmm|PF01073.19 evalue:2.4e-11 score:42.4 best_domain_score:42.0 name:3Beta_HSD; db:Pfam-A.hmm|PF01370.21 evalue:9.8e-18 score:63.7 best_domain_score:63.2 name:Epimerase; db:Pfam-A.hmm|PF07993.12 evalue:1.7e-06 score:26.6 best_domain_score:23.7 name:NAD_binding_4;
8386 9189 CDS
ID metaerg.pl|13357
allec_ids 1.5.1.5; 3.5.4.9;
allgo_ids GO:0004488; GO:0055114; GO:0004477; GO:0000105; GO:0009086; GO:0006164; GO:0035999;
allko_ids K13403; K00288; K01491; K01938; K13402;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002477545;
genomedb_acc GCA_002477545.1;
genomedb_target db:genomedb|GCA_002477545.1|DLQJ01000024.1_8 1 264 evalue:2.5e-73 qcov:98.90 identity:54.90;
kegg_pathway_id 00630; 00670;
kegg_pathway_name Glyoxylate and dicarboxylate metabolism; One carbon pool by folate;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
metacyc_pathway_id PWY-1882; PWY-5497; CODH-PWY; PWY-2201; PWY-5030; P164-PWY; PWY-3841; 1CMET2-PWY; ALL-CHORISMATE-PWY; PWY-1722; FOLSYN-PWY; PWY-6142; PWY-6146;
metacyc_pathway_name superpathway of C1 compounds oxidation to CO2;; purine nucleobases degradation II (anaerobic);; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; folate transformations I;; L-histidine degradation III;; purine nucleobases degradation I (anaerobic);; folate transformations II;; N10-formyl-tetrahydrofolate biosynthesis;; superpathway of chorismate metabolism;; formate assimilation into 5,10-methylenetetrahydrofolate;; superpathway of tetrahydrofolate biosynthesis and salvage;; gluconeogenesis II (Methanobacterium thermoautotrophicum);; Methanobacterium thermoautotrophicum biosynthetic metabolism;;
metacyc_pathway_type C1-COMPOUNDS; Super-Pathways;; Fermentation; Purine-Degradation;; Autotrophic-CO2-Fixation;; Folate-Transformations;; HISTIDINE-DEG;; Fermentation; Purine-Degradation;; Folate-Transformations;; Folate-Biosynthesis;; Super-Pathways;; C1-COMPOUNDS;; Folate-Biosynthesis; Super-Pathways;; Gluconeogenesis; Super-Pathways;; Biosynthesis; Super-Pathways;;
pfam_acc PF00763; PF02882;
pfam_desc Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain;
pfam_id THF_DHG_CYH; THF_DHG_CYH_C;
pfam_target db:Pfam-A.hmm|PF00763.23 evalue:7e-21 score:73.9 best_domain_score:73.2 name:THF_DHG_CYH; db:Pfam-A.hmm|PF02882.19 evalue:1.2e-36 score:124.7 best_domain_score:123.9 name:THF_DHG_CYH_C;
sprot_desc Bifunctional protein FolD;
sprot_id sp|Q47LR8|FOLD_THEFY;
sprot_target db:uniprot_sprot|sp|Q47LR8|FOLD_THEFY 2 266 evalue:1.2e-32 qcov:99.30 identity:35.70;
9228 10685 CDS
ID metaerg.pl|13358
allgo_ids GO:0016020; GO:0016021; GO:0005886; GO:0015450; GO:0065002; GO:0006605; GO:0015031; GO:0043952;
allko_ids K03072;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001567365;
genomedb_acc GCA_001567365.1;
genomedb_target db:genomedb|GCA_001567365.1|KXJ99818.1 5 485 evalue:2.4e-154 qcov:99.20 identity:60.10;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
pfam_acc PF03176; PF02355;
pfam_desc MMPL family; Protein export membrane protein;
pfam_id MMPL; SecD_SecF;
pfam_target db:Pfam-A.hmm|PF03176.15 evalue:2e-06 score:26.2 best_domain_score:26.2 name:MMPL; db:Pfam-A.hmm|PF02355.16 evalue:1.5e-11 score:43.2 best_domain_score:42.1 name:SecD_SecF;
sprot_desc hypothetical protein;
sprot_id sp|Q55610|SECD_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55610|SECD_SYNY3 23 470 evalue:1.1e-68 qcov:92.40 identity:38.90;
tigrfam_acc TIGR00916; TIGR01129;
tigrfam_desc protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD;
tigrfam_mainrole Protein fate; Protein fate;
tigrfam_name 2A0604s01; secD;
tigrfam_sub1role Protein and peptide secretion and trafficking; Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00916 evalue:3.2e-63 score:212.6 best_domain_score:211.9 name:TIGR00916; db:TIGRFAMs.hmm|TIGR01129 evalue:2.4e-108 score:362.0 best_domain_score:361.7 name:TIGR01129;
tm_num 6;
9228 10685 transmembrane_helix
ID metaerg.pl|13359
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
topology i9294-9362o10155-10223i10236-10304o10314-10382i10473-10532o10545-10613i;
10698 11711 CDS
ID metaerg.pl|13360
allgo_ids GO:0016021; GO:0005886; GO:0015450; GO:0065002; GO:0006605; GO:0043952;
allko_ids K03074;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002378195;
genomedb_acc GCA_002378195.1;
genomedb_target db:genomedb|GCA_002378195.1|DFRJ01000004.1_66 1 315 evalue:4.6e-96 qcov:93.50 identity:62.50;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
pfam_acc PF02355; PF07549;
pfam_desc Protein export membrane protein; SecD/SecF GG Motif;
pfam_id SecD_SecF; Sec_GG;
pfam_target db:Pfam-A.hmm|PF02355.16 evalue:2.7e-48 score:163.1 best_domain_score:99.6 name:SecD_SecF; db:Pfam-A.hmm|PF07549.14 evalue:1.3e-05 score:23.7 best_domain_score:22.5 name:Sec_GG;
sprot_desc hypothetical protein;
sprot_id sp|D1CDJ6|SECF_THET1;
sprot_target db:uniprot_sprot|sp|D1CDJ6|SECF_THET1 1 317 evalue:1.0e-33 qcov:94.10 identity:33.70;
tigrfam_acc TIGR00966;
tigrfam_desc protein-export membrane protein SecF;
tigrfam_mainrole Protein fate;
tigrfam_name 3a0501s07;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR00966 evalue:7.7e-56 score:188.7 best_domain_score:181.7 name:TIGR00966;
tm_num 6;
10698 11711 transmembrane_helix
ID metaerg.pl|13361
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
topology i10722-10790o11082-11150i11169-11237o11265-11333i11496-11564o11574-11642i;
11721 11906 CDS
ID metaerg.pl|13362
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
11903 12460 CDS
ID metaerg.pl|13363
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp002378195;
genomedb_acc GCA_002378195.1;
genomedb_target db:genomedb|GCA_002378195.1|DFRJ01000004.1_65 1 180 evalue:1.5e-48 qcov:97.30 identity:56.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
pfam_acc PF13207;
pfam_desc AAA domain;
pfam_id AAA_17;
pfam_target db:Pfam-A.hmm|PF13207.6 evalue:3.8e-07 score:29.8 best_domain_score:28.9 name:AAA_17;
12429 13178 CDS
ID metaerg.pl|13364
allec_ids 1.3.1.78;
allgo_ids GO:0004665; GO:0006571; GO:0008977; GO:0055114; GO:0009507; GO:0033730;
allko_ids K04517; K01713; K01850; K04518; K14170; K14187; K04093; K03856; K04092; K00210; K15227;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__C7867-001;s__C7867-001 sp001189075;
genomedb_acc GCA_001189075.1;
genomedb_target db:genomedb|GCA_001189075.1|KND47972.1 10 245 evalue:8.7e-52 qcov:94.80 identity:43.30;
kegg_pathway_id 00401; 00400;
kegg_pathway_name Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
pfam_acc PF03807; PF02153;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; Prephenate dehydrogenase;
pfam_id F420_oxidored; PDH;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:7.7e-05 score:22.4 best_domain_score:15.5 name:F420_oxidored; db:Pfam-A.hmm|PF02153.17 evalue:1.3e-22 score:79.3 best_domain_score:78.9 name:PDH;
sprot_desc Arogenate dehydrogenase 1, chloroplastic;
sprot_id sp|Q944B6|TYRA1_ARATH;
sprot_target db:uniprot_sprot|sp|Q944B6|TYRA1_ARATH 10 249 evalue:2.0e-18 qcov:96.40 identity:27.20;
13249 15159 CDS
ID metaerg.pl|13365
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
tm_num 1;
13249 15159 transmembrane_helix
ID metaerg.pl|13366
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
topology i13552-13620o;
15868 15167 CDS
ID metaerg.pl|13367
allec_ids 2.7.4.22; 2.7.4.-;
allgo_ids GO:0005737; GO:0005524; GO:0033862; GO:0044210;
allko_ids K12524; K00928; K00003; K12657; K00931; K09903;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA2163;g__OLB19;s__OLB19 sp001783565;
genomedb_acc GCA_001783565.1;
genomedb_target db:genomedb|GCA_001783565.1|OGG87802.1 1 233 evalue:7.8e-95 qcov:100.00 identity:75.50;
kegg_pathway_id 00220; 00240; 00300; 00260;
kegg_pathway_name Urea cycle and metabolism of amino groups; Pyrimidine metabolism; Lysine biosynthesis; Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
metacyc_pathway_id PWY-6577; PWY-5107;
metacyc_pathway_name farnesylcysteine salvage pathway;; phytol salvage pathway;;
metacyc_pathway_type All-Trans-Farnesyl-PP-Biosynthesis; Detoxification;; DITERPENOID-SYN;;
pfam_acc PF00696;
pfam_desc Amino acid kinase family;
pfam_id AA_kinase;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:3.2e-20 score:72.0 best_domain_score:69.1 name:AA_kinase;
sprot_desc Uridylate kinase;
sprot_id sp|Q6KZ23|PYRH_PICTO;
sprot_target db:uniprot_sprot|sp|Q6KZ23|PYRH_PICTO 8 231 evalue:2.7e-17 qcov:96.10 identity:28.90;
tigrfam_acc TIGR02076;
tigrfam_desc putative uridylate kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name pyrH_arch;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR02076 evalue:3.5e-48 score:163.3 best_domain_score:163.1 name:TIGR02076;
16167 16601 CDS
ID metaerg.pl|13368
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
sp YES;
tm_num 1;
16167 16238 signal_peptide
ID metaerg.pl|13369
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
16167 16601 transmembrane_helix
ID metaerg.pl|13370
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 27.9895; 0.302791; 8.37089; 18.8544; 0.461388;
topology o16176-16244i;
>Feature NODE_4157_length_16153_cov_26.6911
2097 700 CDS
ID metaerg.pl|13371
allec_ids 4.3.2.1;
allgo_ids GO:0005737; GO:0004056; GO:0042450;
allko_ids K01679; K01744; K01756; K01857; K01755;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667400.1 2 462 evalue:3.0e-170 qcov:99.10 identity:67.00;
kegg_pathway_id 00720; 00020; 00230; 00330; 00220; 00252; 00910; 00362;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Citrate cycle (TCA cycle); Purine metabolism; Arginine and proline metabolism; Urea cycle and metabolism of amino groups; Alanine and aspartate metabolism; Nitrogen metabolism; Benzoate degradation via hydroxylation;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
metacyc_pathway_id PWY-4983; PWY-5154; ARGSYN-PWY; PWY-5; ARG+POLYAMINE-SYN; ARGININE-SYN4-PWY; ARGSYNBSUB-PWY; PWY-4984; PWY-5004;
metacyc_pathway_name nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);; canavanine biosynthesis;; superpathway of arginine and polyamine biosynthesis;; L-ornithine biosynthesis II;; L-arginine biosynthesis II (acetyl cycle);; urea cycle;; superpathway of L-citrulline metabolism;;
metacyc_pathway_type ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; Polyamine-Biosynthesis; Super-Pathways;; L-Ornithine-Biosynthesis;; ARGININE-SYN;; NITROGEN-DEG;; Citrulline-Biosynthesis; Super-Pathways;;
pfam_acc PF14698; PF00206;
pfam_desc Argininosuccinate lyase C-terminal; Lyase;
pfam_id ASL_C2; Lyase_1;
pfam_target db:Pfam-A.hmm|PF14698.6 evalue:1.1e-16 score:60.6 best_domain_score:59.1 name:ASL_C2; db:Pfam-A.hmm|PF00206.20 evalue:4.6e-64 score:216.0 best_domain_score:215.5 name:Lyase_1;
sprot_desc Argininosuccinate lyase;
sprot_id sp|Q47N85|ARLY_THEFY;
sprot_target db:uniprot_sprot|sp|Q47N85|ARLY_THEFY 8 461 evalue:1.6e-122 qcov:97.60 identity:53.40;
tigrfam_acc TIGR00838;
tigrfam_desc argininosuccinate lyase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argH;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00838 evalue:4.6e-159 score:529.4 best_domain_score:529.2 name:TIGR00838;
3314 2094 CDS
ID metaerg.pl|13372
allec_ids 6.3.4.5;
allgo_ids GO:0004055; GO:0005524; GO:0006526; GO:0005737;
allko_ids K01940; K01955;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667397.1 1 406 evalue:3.8e-198 qcov:100.00 identity:81.00;
kegg_pathway_id 00240; 00251; 00252; 00220; 00330;
kegg_pathway_name Pyrimidine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Arginine and proline metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
metacyc_pathway_id PWY-5154; PWY-4983; ARGSYN-PWY; PWY-4984; PWY-5004; ARGININE-SYN4-PWY; ARGSYNBSUB-PWY; PWY-5; ARG+POLYAMINE-SYN;
metacyc_pathway_name L-arginine biosynthesis III (via N-acetyl-L-citrulline);; nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis I (via L-ornithine);; urea cycle;; superpathway of L-citrulline metabolism;; L-ornithine biosynthesis II;; L-arginine biosynthesis II (acetyl cycle);; canavanine biosynthesis;; superpathway of arginine and polyamine biosynthesis;;
metacyc_pathway_type ARGININE-SYN;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN; Super-Pathways;; NITROGEN-DEG;; Citrulline-Biosynthesis; Super-Pathways;; L-Ornithine-Biosynthesis;; ARGININE-SYN;; NON-PROTEIN-AMINO-ACID-SYN;; Polyamine-Biosynthesis; Super-Pathways;;
pfam_acc PF00764;
pfam_desc Arginosuccinate synthase;
pfam_id Arginosuc_synth;
pfam_target db:Pfam-A.hmm|PF00764.19 evalue:5.8e-169 score:561.7 best_domain_score:561.5 name:Arginosuc_synth;
sprot_desc Argininosuccinate synthase;
sprot_id sp|Q2J866|ASSY_FRACC;
sprot_target db:uniprot_sprot|sp|Q2J866|ASSY_FRACC 6 401 evalue:1.1e-148 qcov:97.50 identity:65.10;
tigrfam_acc TIGR00032;
tigrfam_desc argininosuccinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argG;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00032 evalue:1.9e-149 score:497.4 best_domain_score:497.2 name:TIGR00032;
3904 3338 CDS
ID metaerg.pl|13373
allgo_ids GO:0003700; GO:0006355; GO:0006525; GO:0005737; GO:0034618; GO:0003677; GO:0006526; GO:0051259;
allko_ids K03402;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667396.1 6 148 evalue:6.2e-26 qcov:76.10 identity:50.30;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
pfam_acc PF01316; PF02863;
pfam_desc Arginine repressor, DNA binding domain; Arginine repressor, C-terminal domain;
pfam_id Arg_repressor; Arg_repressor_C;
pfam_target db:Pfam-A.hmm|PF01316.21 evalue:2.3e-12 score:45.7 best_domain_score:45.1 name:Arg_repressor; db:Pfam-A.hmm|PF02863.18 evalue:4.6e-19 score:67.3 best_domain_score:66.6 name:Arg_repressor_C;
sprot_desc Arginine repressor;
sprot_id sp|B0TEK0|ARGR_HELMI;
sprot_target db:uniprot_sprot|sp|B0TEK0|ARGR_HELMI 7 152 evalue:6.9e-16 qcov:77.70 identity:37.00;
4884 3901 CDS
ID metaerg.pl|13374
allec_ids 2.1.3.3;
allgo_ids GO:0006520; GO:0016597; GO:0016743; GO:0005737; GO:0004585; GO:0006526;
allko_ids K00609; K11540; K01954; K00611; K01956; K00610; K01955; K11541; K13043;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108665786.1 4 310 evalue:1.4e-89 qcov:93.90 identity:57.60;
kegg_pathway_id 00240; 00330; 00252; 00251; 00220;
kegg_pathway_name Pyrimidine metabolism; Arginine and proline metabolism; Alanine and aspartate metabolism; Glutamate metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
metacyc_pathway_id ARGSYN-PWY; CITRULLINE-DEG-PWY; ARGORNPROST-PWY; PWY-4981; CITRULBIO-PWY; PWY-5004; PWY-4984; ARGSYNBSUB-PWY; ARGININE-SYN4-PWY; PWY-5; ARG+POLYAMINE-SYN; ARGDEGRAD-PWY;
metacyc_pathway_name L-arginine biosynthesis I (via L-ornithine);; L-citrulline degradation;; L-arginine degradation (Stickland reaction);; L-proline biosynthesis II (from arginine);; L-citrulline biosynthesis;; superpathway of L-citrulline metabolism;; urea cycle;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis II;; canavanine biosynthesis;; superpathway of arginine and polyamine biosynthesis;; L-arginine degradation V (arginine deiminase pathway);;
metacyc_pathway_type ARGININE-SYN; Super-Pathways;; MISCELLANEOUS-DEG;; ARGININE-DEG; Super-Pathways;; PROLINE-SYN;; Citrulline-Biosynthesis;; Citrulline-Biosynthesis; Super-Pathways;; NITROGEN-DEG;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; NON-PROTEIN-AMINO-ACID-SYN;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-DEG; Super-Pathways;;
pfam_acc PF00185; PF02729;
pfam_desc Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain;
pfam_id OTCace; OTCace_N;
pfam_target db:Pfam-A.hmm|PF00185.24 evalue:5.4e-56 score:188.3 best_domain_score:187.9 name:OTCace; db:Pfam-A.hmm|PF02729.21 evalue:1.2e-45 score:154.4 best_domain_score:153.9 name:OTCace_N;
sprot_desc Ornithine carbamoyltransferase;
sprot_id sp|A8LE44|OTC_FRASN;
sprot_target db:uniprot_sprot|sp|A8LE44|OTC_FRASN 1 316 evalue:2.8e-89 qcov:96.60 identity:58.50;
tigrfam_acc TIGR00658;
tigrfam_desc ornithine carbamoyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name orni_carb_tr;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00658 evalue:2.6e-117 score:390.5 best_domain_score:390.3 name:TIGR00658;
6137 4881 CDS
ID metaerg.pl|13375
allec_ids 2.6.1.11;
allgo_ids GO:0009058; GO:0030170; GO:0005737; GO:0003992; GO:0006526;
allko_ids K00821; K00818; K05830;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441687.1 19 411 evalue:3.5e-138 qcov:94.00 identity:66.40;
kegg_pathway_id 00220; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
metacyc_pathway_id PWY-5154; ARGSYN-PWY; GLUTORN-PWY; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY;
metacyc_pathway_name L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);; L-ornithine biosynthesis I;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);;
metacyc_pathway_type ARGININE-SYN;; ARGININE-SYN; Super-Pathways;; L-Ornithine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF00155; PF00202; PF01212;
pfam_desc Aminotransferase class I and II; Aminotransferase class-III; Beta-eliminating lyase;
pfam_id Aminotran_1_2; Aminotran_3; Beta_elim_lyase;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:6.5e-06 score:24.8 best_domain_score:17.6 name:Aminotran_1_2; db:Pfam-A.hmm|PF00202.21 evalue:7.4e-101 score:337.0 best_domain_score:336.2 name:Aminotran_3; db:Pfam-A.hmm|PF01212.21 evalue:0.00013 score:20.6 best_domain_score:18.1 name:Beta_elim_lyase;
sprot_desc Acetylornithine aminotransferase;
sprot_id sp|Q828A3|ARGD_STRAW;
sprot_target db:uniprot_sprot|sp|Q828A3|ARGD_STRAW 11 408 evalue:4.5e-84 qcov:95.20 identity:46.40;
tigrfam_acc TIGR00707;
tigrfam_desc transaminase, acetylornithine/succinylornithine family;
tigrfam_name argD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00707 evalue:7.6e-124 score:412.5 best_domain_score:412.3 name:TIGR00707;
7117 6134 CDS
ID metaerg.pl|13376
allec_ids 2.7.2.8;
allgo_ids GO:0005737; GO:0003991; GO:0005524; GO:0042450;
allko_ids K00145; K00620; K00618; K01438; K00931; K00619; K12657; K00930; K00928; K00003; K12524; K12659;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441686.1 26 314 evalue:2.1e-98 qcov:88.40 identity:65.70;
kegg_pathway_id 00220; 00260; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Glycine, serine and threonine metabolism; Lysine biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
metacyc_pathway_id GLUTORN-PWY; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; PWY-5154; ARGSYN-PWY;
metacyc_pathway_name L-ornithine biosynthesis I;; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type L-Ornithine-Biosynthesis;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF00696;
pfam_desc Amino acid kinase family;
pfam_id AA_kinase;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:1.7e-41 score:141.6 best_domain_score:141.4 name:AA_kinase;
sprot_desc Acetylglutamate kinase;
sprot_id sp|A4X652|ARGB_SALTO;
sprot_target db:uniprot_sprot|sp|A4X652|ARGB_SALTO 31 314 evalue:2.8e-73 qcov:86.90 identity:51.90;
tigrfam_acc TIGR00761;
tigrfam_desc acetylglutamate kinase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argB;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00761 evalue:6.1e-67 score:224.7 best_domain_score:224.4 name:TIGR00761;
8394 7114 CDS
ID metaerg.pl|13377
allec_ids 2.3.1.35; 2.3.1.1; 2.3.1.35 2.3.1.1;
allgo_ids GO:0004358; GO:0006526; GO:0005737; GO:0004042; GO:0103045; GO:0006592;
allko_ids K00620;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Coriobacteriia;o__OPB41;f__UBA2279;g__UBA2272;s__UBA2272 sp002347725;
genomedb_acc GCA_002347725.1;
genomedb_target db:genomedb|GCA_002347725.1|DDXA01000004.1_15 25 424 evalue:3.9e-84 qcov:93.90 identity:46.30;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
metacyc_pathway_id ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; GLUTORN-PWY; ARGSYN-PWY; PWY-5154;
metacyc_pathway_name superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis I;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);;
metacyc_pathway_type Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF01960;
pfam_desc ArgJ family;
pfam_id ArgJ;
pfam_target db:Pfam-A.hmm|PF01960.18 evalue:7.6e-127 score:422.3 best_domain_score:422.2 name:ArgJ;
sprot_desc Arginine biosynthesis bifunctional protein ArgJ;
sprot_id sp|P62061|ARGJ_GEOSL;
sprot_target db:uniprot_sprot|sp|P62061|ARGJ_GEOSL 34 426 evalue:3.7e-73 qcov:92.30 identity:43.70;
tigrfam_acc TIGR00120;
tigrfam_desc glutamate N-acetyltransferase/amino-acid acetyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ArgJ;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00120 evalue:9.6e-108 score:359.7 best_domain_score:359.5 name:TIGR00120;
9449 8391 CDS
ID metaerg.pl|13378
allec_ids 1.2.1.38;
allgo_ids GO:0016620; GO:0051287; GO:0055114; GO:0005737; GO:0003942; GO:0046983; GO:0006526;
allko_ids K00133; K12659; K00145; K00618; K00930;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441685.1 4 352 evalue:5.3e-95 qcov:99.10 identity:56.70;
kegg_pathway_id 00260; 00300; 00220;
kegg_pathway_name Glycine, serine and threonine metabolism; Lysine biosynthesis; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
metacyc_pathway_id ARGSYN-PWY; PWY-5154; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; GLUTORN-PWY;
metacyc_pathway_name L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis I;;
metacyc_pathway_type ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; L-Ornithine-Biosynthesis;;
pfam_acc PF01118; PF02774;
pfam_desc Semialdehyde dehydrogenase, NAD binding domain; Semialdehyde dehydrogenase, dimerisation domain;
pfam_id Semialdhyde_dh; Semialdhyde_dhC;
pfam_target db:Pfam-A.hmm|PF01118.24 evalue:6.2e-27 score:93.7 best_domain_score:92.8 name:Semialdhyde_dh; db:Pfam-A.hmm|PF02774.18 evalue:4.2e-15 score:55.5 best_domain_score:50.3 name:Semialdhyde_dhC;
sprot_desc N-acetyl-gamma-glutamyl-phosphate reductase;
sprot_id sp|Q0ABJ9|ARGC_ALKEH;
sprot_target db:uniprot_sprot|sp|Q0ABJ9|ARGC_ALKEH 1 352 evalue:4.8e-71 qcov:100.00 identity:45.80;
tigrfam_acc TIGR01850;
tigrfam_desc N-acetyl-gamma-glutamyl-phosphate reductase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argC;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01850 evalue:2.9e-108 score:361.3 best_domain_score:361.1 name:TIGR01850;
12076 9620 CDS
ID metaerg.pl|13379
allec_ids 6.1.1.20;
allgo_ids GO:0003723; GO:0004826; GO:0005737; GO:0005524; GO:0000287; GO:0000049; GO:0006432;
allko_ids K01890;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441684.1 1 817 evalue:1.8e-247 qcov:99.90 identity:58.20;
kegg_pathway_id 00400; 00970;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03483; PF03484; PF03147; PF01588; PF17759;
pfam_desc B3/4 domain; tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; Phenylalanyl tRNA synthetase beta chain CLM domain;
pfam_id B3_4; B5; FDX-ACB; tRNA_bind; tRNA_synthFbeta;
pfam_target db:Pfam-A.hmm|PF03483.17 evalue:1.6e-61 score:206.3 best_domain_score:205.7 name:B3_4; db:Pfam-A.hmm|PF03484.15 evalue:5.4e-16 score:57.9 best_domain_score:53.2 name:B5; db:Pfam-A.hmm|PF03147.14 evalue:8.6e-18 score:63.8 best_domain_score:62.0 name:FDX-ACB; db:Pfam-A.hmm|PF01588.20 evalue:3.4e-12 score:45.5 best_domain_score:44.7 name:tRNA_bind; db:Pfam-A.hmm|PF17759.1 evalue:9.1e-41 score:138.9 best_domain_score:138.0 name:tRNA_synthFbeta;
sprot_desc Phenylalanine--tRNA ligase beta subunit;
sprot_id sp|Q47N76|SYFB_THEFY;
sprot_target db:uniprot_sprot|sp|Q47N76|SYFB_THEFY 1 817 evalue:3.6e-109 qcov:99.90 identity:36.20;
tigrfam_acc TIGR00472;
tigrfam_desc phenylalanine--tRNA ligase, beta subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name pheT_bact;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00472 evalue:7.9e-164 score:546.1 best_domain_score:545.8 name:TIGR00472;
13074 12076 CDS
ID metaerg.pl|13380
allec_ids 6.1.1.20;
allgo_ids GO:0000166; GO:0004826; GO:0005524; GO:0005737; GO:0006432; GO:0000287; GO:0000049;
allko_ids K01889;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667386.1 3 332 evalue:8.7e-124 qcov:99.40 identity:68.00;
kegg_pathway_id 00400; 00970;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF02912; PF01409;
pfam_desc Aminoacyl tRNA synthetase class II, N-terminal domain; tRNA synthetases class II core domain (F);
pfam_id Phe_tRNA-synt_N; tRNA-synt_2d;
pfam_target db:Pfam-A.hmm|PF02912.18 evalue:1.4e-18 score:65.8 best_domain_score:65.0 name:Phe_tRNA-synt_N; db:Pfam-A.hmm|PF01409.20 evalue:1.3e-95 score:318.7 best_domain_score:318.4 name:tRNA-synt_2d;
sprot_desc Phenylalanine--tRNA ligase alpha subunit;
sprot_id sp|Q5YYH7|SYFA_NOCFA;
sprot_target db:uniprot_sprot|sp|Q5YYH7|SYFA_NOCFA 1 332 evalue:1.1e-88 qcov:100.00 identity:51.80;
tigrfam_acc TIGR00468;
tigrfam_desc phenylalanine--tRNA ligase, alpha subunit;
tigrfam_mainrole Protein synthesis;
tigrfam_name pheS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00468 evalue:7.5e-98 score:326.9 best_domain_score:321.1 name:TIGR00468;
13888 13118 CDS
ID metaerg.pl|13381
allec_ids 2.1.1.-;
allgo_ids GO:0003723; GO:0006396; GO:0008173;
allko_ids K03218; K03437;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667384.1 1 253 evalue:1.3e-37 qcov:98.80 identity:43.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
metacyc_pathway_id PWY-5116; PWY-1581; CO2FORM-PWY; PWY-5328; METHIONINE-DEG1-PWY; PWY-6519; PWY-5773; BIOTIN-BIOSYNTHESIS-PWY; PWY-5135; PWY-6395; PWY-6427; PWY-6146; PWY-5479; PWY-5987; PWY-6292; PWY-6151; PWY-5855; PWY-5209; PWY-6303; PWY-5857; METH-ACETATE-PWY; PWY-5856; PWY-6154; PWY-6424; UBISYN-PWY; PWY-6142; PWY-5876; PWY-1061; PWY-5975; PWY-5864; PWY-5305; PWYG-321; PWY-5729; PWY-6113; PWY-1422; PWY-6477; PWY-5467; CODH-PWY; PWY-6575; PWY-6442; PWY-5041; PWY-4021; ALL-CHORISMATE-PWY; PWY-3542; PWY-6153;
metacyc_pathway_name sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; methanogenesis from methanol;; superpathway of L-methionine salvage and degradation;; L-methionine degradation I (to L-homocysteine);; 8-amino-7-oxononanoate biosynthesis I;; gossypol biosynthesis;; biotin biosynthesis I;; xanthohumol biosynthesis;; superpathway of seleno-compound metabolism;; rot-2'-enonate biosynthesis;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; S-adenosyl-L-methionine cycle I;; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);; methanogenesis from acetate;; ubiquinol-9 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; magnoflorine biosynthesis;; homogalacturonan biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; vestitol and sativan biosynthesis;; superpathway of mycolate biosynthesis;; vitamin E biosynthesis (tocopherols);; gibberellin inactivation II (methylation);; gramine biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; superpathway of chorismate metabolism;; choline biosynthesis II;; autoinducer AI-2 biosynthesis I;;
metacyc_pathway_type FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; METHIONINE-DEG; Super-Pathways;; METHIONINE-DEG;; 7-Keto-8-aminopelargonate-Biosynthesis;; SESQUITERPENOID-SYN;; BIOTIN-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Rotenoids-Biosynthesis;; Biosynthesis; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; CYSTEINE-SYN; Super-Pathways;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; Super-Pathways; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; ISOFLAVONOID-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; Autotrophic-CO2-Fixation;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; Super-Pathways;; Choline-Biosynthesis;; Autoinducer-Biosynthesis;;
pfam_acc PF00588; PF08032;
pfam_desc SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding;
pfam_id SpoU_methylase; SpoU_sub_bind;
pfam_target db:Pfam-A.hmm|PF00588.19 evalue:2.8e-28 score:98.1 best_domain_score:97.6 name:SpoU_methylase; db:Pfam-A.hmm|PF08032.12 evalue:2.5e-06 score:26.9 best_domain_score:22.9 name:SpoU_sub_bind;
sprot_desc Uncharacterized tRNA/rRNA methyltransferase YsgA;
sprot_id sp|P94538|YSGA_BACSU;
sprot_target db:uniprot_sprot|sp|P94538|YSGA_BACSU 7 255 evalue:7.5e-21 qcov:97.30 identity:27.90;
14309 13941 CDS
ID metaerg.pl|13382
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843; GO:0000027;
allko_ids K02887;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667383.1 1 119 evalue:2.0e-41 qcov:97.50 identity:76.50;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
pfam_acc PF00453;
pfam_desc Ribosomal protein L20;
pfam_id Ribosomal_L20;
pfam_target db:Pfam-A.hmm|PF00453.18 evalue:3e-42 score:142.3 best_domain_score:142.1 name:Ribosomal_L20;
sprot_desc 50S ribosomal protein L20;
sprot_id sp|A0LUC9|RL20_ACIC1;
sprot_target db:uniprot_sprot|sp|A0LUC9|RL20_ACIC1 1 117 evalue:4.3e-35 qcov:95.90 identity:65.00;
tigrfam_acc TIGR01032;
tigrfam_desc ribosomal protein bL20;
tigrfam_mainrole Protein synthesis;
tigrfam_name rplT_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR01032 evalue:8.6e-42 score:141.2 best_domain_score:141.0 name:TIGR01032;
14602 14399 CDS
ID metaerg.pl|13383
allgo_ids GO:0003735; GO:0005622; GO:0005840; GO:0006412;
allko_ids K02916;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669753.1 3 64 evalue:2.1e-13 qcov:92.50 identity:69.40;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
pfam_acc PF01632;
pfam_desc Ribosomal protein L35;
pfam_id Ribosomal_L35p;
pfam_target db:Pfam-A.hmm|PF01632.19 evalue:3e-20 score:71.7 best_domain_score:71.6 name:Ribosomal_L35p;
sprot_desc 50S ribosomal protein L35;
sprot_id sp|A6WCU3|RL35_KINRD;
sprot_target db:uniprot_sprot|sp|A6WCU3|RL35_KINRD 3 64 evalue:4.8e-12 qcov:92.50 identity:62.90;
tigrfam_GO GO:0000315;
tigrfam_acc TIGR00001;
tigrfam_desc ribosomal protein bL35;
tigrfam_mainrole Protein synthesis;
tigrfam_name rpmI_bact;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00001 evalue:2.9e-19 score:68.3 best_domain_score:68.2 name:TIGR00001;
15369 14647 CDS
ID metaerg.pl|13384
allgo_ids GO:0006413;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441683.1 2 224 evalue:5.0e-73 qcov:92.90 identity:69.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
pfam_acc PF00707; PF05198;
pfam_desc Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain;
pfam_id IF3_C; IF3_N;
pfam_target db:Pfam-A.hmm|PF00707.22 evalue:1.1e-35 score:120.6 best_domain_score:120.1 name:IF3_C; db:Pfam-A.hmm|PF05198.16 evalue:4.8e-30 score:102.9 best_domain_score:102.0 name:IF3_N;
tigrfam_acc TIGR00168;
tigrfam_desc translation initiation factor IF-3;
tigrfam_mainrole Protein synthesis;
tigrfam_name infC;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00168 evalue:5.6e-60 score:200.9 best_domain_score:200.6 name:TIGR00168;
16153 15623 CDS
ID metaerg.pl|13385
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667382.1 26 175 evalue:2.5e-13 qcov:85.20 identity:45.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 50.8517; 3.58339; 5.29501; 41.3777; 0.595513;
>Feature NODE_4613_length_15247_cov_53.4285
764 3 CDS
ID metaerg.pl|13386
allec_ids 4.3.3.7;
allgo_ids GO:0016829; GO:0005737; GO:0008840; GO:0019877; GO:0009089;
allko_ids K01714;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091345.1 1 254 evalue:7.1e-134 qcov:100.00 identity:94.90;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
pfam_acc PF00701;
pfam_desc Dihydrodipicolinate synthetase family;
pfam_id DHDPS;
pfam_target db:Pfam-A.hmm|PF00701.22 evalue:5.4e-96 score:319.9 best_domain_score:319.8 name:DHDPS;
sprot_desc 4-hydroxy-tetrahydrodipicolinate synthase;
sprot_id sp|Q8YQY1|DAPA_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YQY1|DAPA_NOSS1 1 254 evalue:4.6e-124 qcov:100.00 identity:86.20;
tigrfam_acc TIGR00674;
tigrfam_desc 4-hydroxy-tetrahydrodipicolinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapA;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00674 evalue:7.9e-102 score:339.1 best_domain_score:338.9 name:TIGR00674;
2020 971 CDS
ID metaerg.pl|13387
allec_ids 1.2.1.11;
allgo_ids GO:0016620; GO:0051287; GO:0055114; GO:0004073; GO:0050661; GO:0046983; GO:0071266; GO:0019877; GO:0009097; GO:0009089; GO:0009088;
allko_ids K12659; K00133; K00145;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091346.1 1 349 evalue:5.8e-187 qcov:100.00 identity:96.60;
kegg_pathway_id 00220; 00300; 00260;
kegg_pathway_name Urea cycle and metabolism of amino groups; Lysine biosynthesis; Glycine, serine and threonine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
metacyc_pathway_id THRESYN-PWY; PWY-724; HOMOSERSYN-PWY; METSYN-PWY; PWY-6562; PWY0-781; PWY-5097; PWY-6565; DAPLYSINESYN-PWY; PWY-5347; PWY-3001; P101-PWY; P4-PWY; PWY-5345; PWY-2941; PWY-6559; MET-SAM-PWY;
metacyc_pathway_name superpathway of L-threonine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis II;; L-homoserine biosynthesis;; superpathway of L-homoserine and L-methionine biosynthesis;; norspermidine biosynthesis;; aspartate superpathway;; L-lysine biosynthesis VI;; superpathway of polyamine biosynthesis III;; L-lysine biosynthesis I;; superpathway of L-methionine biosynthesis (transsulfuration);; superpathway of L-isoleucine biosynthesis I;; ectoine biosynthesis;; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; superpathway of L-methionine biosynthesis (by sulfhydrylation);; L-lysine biosynthesis II;; spermidine biosynthesis II;; superpathway of S-adenosyl-L-methionine biosynthesis;;
metacyc_pathway_type Super-Pathways; THREONINE-BIOSYNTHESIS;; Amino-Acid-Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis;; Super-Pathways;; LYSINE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Methionine-De-novo-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN; Super-Pathways;; Polyamine-Biosynthesis;; Amino-Acid-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; LYSINE-SYN;; Spermidine-Biosynthesis;; Super-Pathways;;
pfam_acc PF01118; PF02774;
pfam_desc Semialdehyde dehydrogenase, NAD binding domain; Semialdehyde dehydrogenase, dimerisation domain;
pfam_id Semialdhyde_dh; Semialdhyde_dhC;
pfam_target db:Pfam-A.hmm|PF01118.24 evalue:4e-32 score:110.4 best_domain_score:109.5 name:Semialdhyde_dh; db:Pfam-A.hmm|PF02774.18 evalue:1.3e-49 score:168.1 best_domain_score:167.5 name:Semialdhyde_dhC;
sprot_desc Aspartate-semialdehyde dehydrogenase;
sprot_id sp|Q55512|DHAS_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55512|DHAS_SYNY3 1 338 evalue:3.2e-139 qcov:96.80 identity:73.40;
tigrfam_acc TIGR01296;
tigrfam_desc aspartate-semialdehyde dehydrogenase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name asd_B;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01296 evalue:2.8e-123 score:410.5 best_domain_score:410.2 name:TIGR01296;
3226 4650 CDS
ID metaerg.pl|13388
allec_ids 5.2.1.8;
allgo_ids GO:0006457; GO:0015031; GO:0005737; GO:0003755; GO:0007049; GO:0051301;
allko_ids K03545;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196098.1 1 474 evalue:5.6e-241 qcov:100.00 identity:95.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
pfam_acc PF00254; PF05698; PF05697;
pfam_desc FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF) C-terminus; Bacterial trigger factor protein (TF);
pfam_id FKBP_C; Trigger_C; Trigger_N;
pfam_target db:Pfam-A.hmm|PF00254.28 evalue:9.5e-09 score:34.7 best_domain_score:33.5 name:FKBP_C; db:Pfam-A.hmm|PF05698.14 evalue:1.1e-32 score:112.5 best_domain_score:112.5 name:Trigger_C; db:Pfam-A.hmm|PF05697.13 evalue:3.8e-34 score:117.3 best_domain_score:117.3 name:Trigger_N;
sprot_desc Trigger factor;
sprot_id sp|B2IT89|TIG_NOSP7;
sprot_target db:uniprot_sprot|sp|B2IT89|TIG_NOSP7 1 449 evalue:6.5e-204 qcov:94.70 identity:81.60;
tigrfam_acc TIGR00115;
tigrfam_desc trigger factor;
tigrfam_mainrole Protein fate;
tigrfam_name tig;
tigrfam_sub1role Protein folding and stabilization;
tigrfam_target db:TIGRFAMs.hmm|TIGR00115 evalue:1.3e-112 score:375.8 best_domain_score:375.6 name:TIGR00115;
4922 5620 CDS
ID metaerg.pl|13389
allec_ids 3.4.21.92;
allgo_ids GO:0005737; GO:0004252;
allko_ids K01358;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091348.1 1 232 evalue:1.8e-123 qcov:100.00 identity:99.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
pfam_acc PF00574;
pfam_desc Clp protease;
pfam_id CLP_protease;
pfam_target db:Pfam-A.hmm|PF00574.23 evalue:2.9e-86 score:287.2 best_domain_score:286.9 name:CLP_protease;
sprot_desc ATP-dependent Clp protease proteolytic subunit 2;
sprot_id sp|Q8YQX8|CLPP2_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YQX8|CLPP2_NOSS1 1 232 evalue:4.9e-112 qcov:100.00 identity:88.40;
tigrfam_acc TIGR00493;
tigrfam_desc ATP-dependent Clp endopeptidase, proteolytic subunit ClpP;
tigrfam_mainrole Protein fate;
tigrfam_name clpP;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00493 evalue:2.5e-106 score:352.8 best_domain_score:352.6 name:TIGR00493;
tm_num 1;
4922 5620 transmembrane_helix
ID metaerg.pl|13390
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
topology i5261-5329o;
5630 6964 CDS
ID metaerg.pl|13391
allgo_ids GO:0005524; GO:0046983; GO:0051082; GO:0008270; GO:0006457;
allko_ids K02341; K02343; K03544;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006196094.1 1 444 evalue:2.7e-245 qcov:100.00 identity:98.40;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
pfam_acc PF00004; PF07724; PF07728; PF10431; PF01078; PF05496; PF00158; PF06689;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (Cdc48 subfamily); AAA domain (dynein-related subfamily); C-terminal, D2-small domain, of ClpB protein ; Magnesium chelatase, subunit ChlI; Holliday junction DNA helicase RuvB P-loop domain; Sigma-54 interaction domain; ClpX C4-type zinc finger;
pfam_id AAA; AAA_2; AAA_5; ClpB_D2-small; Mg_chelatase; RuvB_N; Sigma54_activat; zf-C4_ClpX;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:3.2e-16 score:59.2 best_domain_score:58.0 name:AAA; db:Pfam-A.hmm|PF07724.14 evalue:1.1e-46 score:158.3 best_domain_score:157.5 name:AAA_2; db:Pfam-A.hmm|PF07728.14 evalue:2.2e-05 score:23.7 best_domain_score:21.4 name:AAA_5; db:Pfam-A.hmm|PF10431.9 evalue:5.7e-18 score:64.0 best_domain_score:62.6 name:ClpB_D2-small; db:Pfam-A.hmm|PF01078.21 evalue:5.6e-07 score:28.4 best_domain_score:22.1 name:Mg_chelatase; db:Pfam-A.hmm|PF05496.12 evalue:2.9e-05 score:23.1 best_domain_score:20.3 name:RuvB_N; db:Pfam-A.hmm|PF00158.26 evalue:0.00013 score:20.9 best_domain_score:13.2 name:Sigma54_activat; db:Pfam-A.hmm|PF06689.13 evalue:1.4e-21 score:75.3 best_domain_score:74.3 name:zf-C4_ClpX;
sprot_desc ATP-dependent Clp protease ATP-binding subunit ClpX;
sprot_id sp|Q3M727|CLPX_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3M727|CLPX_ANAVT 1 444 evalue:3.3e-234 qcov:100.00 identity:92.80;
tigrfam_acc TIGR00382;
tigrfam_desc ATP-dependent Clp protease, ATP-binding subunit ClpX;
tigrfam_mainrole Protein fate;
tigrfam_name clpX;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00382 evalue:5.6e-210 score:696.7 best_domain_score:696.5 name:TIGR00382;
7042 7947 CDS
ID metaerg.pl|13392
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091350.1 1 298 evalue:3.2e-157 qcov:99.00 identity:93.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
pfam_acc PF00561; PF12697; PF12146;
pfam_desc alpha/beta hydrolase fold; Alpha/beta hydrolase family; Serine aminopeptidase, S33;
pfam_id Abhydrolase_1; Abhydrolase_6; Hydrolase_4;
pfam_target db:Pfam-A.hmm|PF00561.20 evalue:8.5e-28 score:96.9 best_domain_score:92.2 name:Abhydrolase_1; db:Pfam-A.hmm|PF12697.7 evalue:1.4e-21 score:77.4 best_domain_score:77.0 name:Abhydrolase_6; db:Pfam-A.hmm|PF12146.8 evalue:1e-20 score:73.3 best_domain_score:69.8 name:Hydrolase_4;
9020 8034 CDS
ID metaerg.pl|13393
allgo_ids GO:0003700; GO:0006355;
allko_ids K00825;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091352.1 1 328 evalue:1.4e-169 qcov:100.00 identity:94.80;
kegg_pathway_id 00300; 00310;
kegg_pathway_name Lysine biosynthesis; Lysine degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
pfam_acc PF00392;
pfam_desc Bacterial regulatory proteins, gntR family;
pfam_id GntR;
pfam_target db:Pfam-A.hmm|PF00392.21 evalue:3.6e-12 score:45.0 best_domain_score:43.7 name:GntR;
9231 9980 CDS
ID metaerg.pl|13394
allec_ids 3.1.1.45;
allgo_ids GO:0016787; GO:0008806;
allko_ids K01061;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804204.1 1 249 evalue:8.0e-130 qcov:100.00 identity:92.40;
kegg_pathway_id 00361; 00364;
kegg_pathway_name gamma-Hexachlorocyclohexane degradation; Fluorobenzoate degradation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
metacyc_pathway_id PWY-6089; PWY-6193;
metacyc_pathway_name 3-chlorocatechol degradation I (ortho);; 3-chlorocatechol degradation II (ortho);;
metacyc_pathway_type 3-Chlorocatechol-Degradation;; 3-Chlorocatechol-Degradation;;
pfam_acc PF08840; PF01738;
pfam_desc BAAT / Acyl-CoA thioester hydrolase C terminal; Dienelactone hydrolase family;
pfam_id BAAT_C; DLH;
pfam_target db:Pfam-A.hmm|PF08840.11 evalue:4.2e-09 score:35.9 best_domain_score:28.3 name:BAAT_C; db:Pfam-A.hmm|PF01738.18 evalue:1e-63 score:214.0 best_domain_score:213.9 name:DLH;
sprot_desc Putative carboxymethylenebutenolidase;
sprot_id sp|P73163|DLHH_SYNY3;
sprot_target db:uniprot_sprot|sp|P73163|DLHH_SYNY3 6 247 evalue:1.3e-81 qcov:97.20 identity:59.90;
10246 11148 CDS
ID metaerg.pl|13395
allgo_ids GO:0003676; GO:0005840; GO:0003723;
allko_ids K03049; K00962; K12818; K03022; K02945;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091354.1 1 300 evalue:6.6e-155 qcov:100.00 identity:97.30;
kegg_pathway_id 03010; 00240; 00230; 03020;
kegg_pathway_name Ribosome; Pyrimidine metabolism; Purine metabolism; RNA polymerase;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
pfam_acc PF00575; PF13509;
pfam_desc S1 RNA binding domain; S1 domain;
pfam_id S1; S1_2;
pfam_target db:Pfam-A.hmm|PF00575.23 evalue:2.6e-42 score:142.3 best_domain_score:64.9 name:S1; db:Pfam-A.hmm|PF13509.6 evalue:1.6e-05 score:24.1 best_domain_score:11.4 name:S1_2;
sprot_desc 30S ribosomal protein S1;
sprot_id sp|O33698|RS1_SYNE7;
sprot_target db:uniprot_sprot|sp|O33698|RS1_SYNE7 7 294 evalue:7.0e-79 qcov:96.00 identity:52.40;
11504 11418 tRNA
ID metaerg.pl|13396
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
name tRNA_Ser_tga;
12606 11644 CDS
ID metaerg.pl|13397
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091358.1 11 315 evalue:3.4e-173 qcov:95.30 identity:97.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
pfam_acc PF00149; PF12850;
pfam_desc Calcineurin-like phosphoesterase; Calcineurin-like phosphoesterase superfamily domain;
pfam_id Metallophos; Metallophos_2;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:1e-11 score:45.0 best_domain_score:44.6 name:Metallophos; db:Pfam-A.hmm|PF12850.7 evalue:2.7e-10 score:39.9 best_domain_score:35.3 name:Metallophos_2;
tigrfam_acc TIGR04168;
tigrfam_desc TIGR04168 family protein;
tigrfam_name TIGR04168;
tigrfam_target db:TIGRFAMs.hmm|TIGR04168 evalue:1.9e-124 score:413.6 best_domain_score:413.2 name:TIGR04168;
12702 13700 CDS
ID metaerg.pl|13398
allec_ids 2.5.1.72;
allgo_ids GO:0008987; GO:0009435; GO:0051539; GO:0005737; GO:0046872;
allko_ids K03517;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091360.1 9 332 evalue:1.9e-179 qcov:97.60 identity:97.50;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
metacyc_pathway_id PYRIDNUCSYN-PWY; PWY0-781;
metacyc_pathway_name NAD de novo biosynthesis I (from aspartate);; aspartate superpathway;;
metacyc_pathway_type NAD-SYN;; Super-Pathways;;
pfam_acc PF02445;
pfam_desc Quinolinate synthetase A protein;
pfam_id NadA;
pfam_target db:Pfam-A.hmm|PF02445.16 evalue:2.2e-119 score:397.3 best_domain_score:397.1 name:NadA;
sprot_desc Quinolinate synthase A;
sprot_id sp|B2IYC1|NADA_NOSP7;
sprot_target db:uniprot_sprot|sp|B2IYC1|NADA_NOSP7 9 331 evalue:3.9e-171 qcov:97.30 identity:92.30;
tigrfam_acc TIGR00550;
tigrfam_desc quinolinate synthetase complex, A subunit;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name nadA;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00550 evalue:2.6e-120 score:400.4 best_domain_score:400.3 name:TIGR00550;
14685 13753 CDS
ID metaerg.pl|13399
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091361.1 1 310 evalue:8.1e-148 qcov:100.00 identity:91.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
15119 15004 bac_5SrRNA
ID metaerg.pl|13400
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 80.8241; 0.0386832; 80.9112; 0.0484202;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_5018_length_14483_cov_10.2653
2883 2620 CDS
ID metaerg.pl|13401
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Trebouxiophyceae;no__Trebouxiophyceae incertae sedis;f__Coccomyxaceae;g__Coccomyxa;s__Coccomyxa subellipsoidea;;
genomedb_acc GCF_000258705.1;
genomedb_target db:genomedb|GCF_000258705.1|XP_005649678.1 4 87 evalue:3.5e-08 qcov:96.60 identity:46.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
3604 3170 CDS
ID metaerg.pl|13402
allgo_ids GO:0005509; GO:0009523; GO:0009654; GO:0015979; GO:0019898; GO:0009507; GO:0009570; GO:0009543; GO:0009535; GO:0016020; GO:0009579; GO:0031977; GO:0048564;
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Chlorophyceae;o__Sphaeropleales;f__Selenastraceae;g__Monoraphidium;s__Monoraphidium neglectum;;
genomedb_acc GCF_000611645.1;
genomedb_target db:genomedb|GCF_000611645.1|XP_013895274.1 2 120 evalue:2.4e-22 qcov:82.60 identity:49.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
pfam_acc PF01789;
pfam_desc PsbP;
pfam_id PsbP;
pfam_target db:Pfam-A.hmm|PF01789.16 evalue:2.6e-16 score:59.4 best_domain_score:59.1 name:PsbP;
sp YES;
sprot_desc PsbP domain-containing protein 1, chloroplastic;
sprot_id sp|O23403|PPD1_ARATH;
sprot_target db:uniprot_sprot|sp|O23403|PPD1_ARATH 1 127 evalue:9.7e-18 qcov:88.20 identity:41.70;
3170 3214 lipoprotein_signal_peptide
ID metaerg.pl|13403
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
4136 3813 CDS
ID metaerg.pl|13404
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
4984 4733 CDS
ID metaerg.pl|13405
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
7199 5226 CDS
ID metaerg.pl|13406
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
7707 7510 CDS
ID metaerg.pl|13407
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
8506 9228 CDS
ID metaerg.pl|13408
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
10435 9938 CDS
ID metaerg.pl|13409
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
11348 10644 CDS
ID metaerg.pl|13410
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
sp YES;
10644 10712 signal_peptide
ID metaerg.pl|13411
Note TAT;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
11897 11364 CDS
ID metaerg.pl|13412
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
12685 12137 CDS
ID metaerg.pl|13413
allgo_ids GO:0006914; GO:1990316;
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Chlorophyceae;o__Sphaeropleales;f__Selenastraceae;g__Monoraphidium;s__Monoraphidium neglectum;;
genomedb_acc GCF_000611645.1;
genomedb_target db:genomedb|GCF_000611645.1|XP_013903948.1 13 168 evalue:4.3e-16 qcov:85.70 identity:39.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
pfam_acc PF10033;
pfam_desc Autophagy-related protein 13;
pfam_id ATG13;
pfam_target db:Pfam-A.hmm|PF10033.9 evalue:2.3e-19 score:69.3 best_domain_score:67.8 name:ATG13;
14109 14483 CDS
ID metaerg.pl|13414
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.4328; ; 16.4124; ; 0.0203726;
>Feature NODE_5065_length_14422_cov_37.977
154 82 tRNA
ID metaerg.pl|13415
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
name tRNA_Lys_ttt;
237 163 tRNA
ID metaerg.pl|13416
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
name tRNA_Val_tac;
359 250 bac_5SrRNA
ID metaerg.pl|13417
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP016201.421863.424580 41 96 evalue:1.67e-11 qcov:51 identity:89.655;
rRNA_taxon Bacteria;Firmicutes;Negativicutes;
1003 470 CDS
ID metaerg.pl|13418
allec_ids 1.8.4.11;
allgo_ids GO:0008113; GO:0055114; GO:0006464;
allko_ids K07304; K07305; K12267;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091268511.1 1 176 evalue:3.6e-84 qcov:99.40 identity:83.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
pfam_acc PF01625;
pfam_desc Peptide methionine sulfoxide reductase;
pfam_id PMSR;
pfam_target db:Pfam-A.hmm|PF01625.21 evalue:8.6e-60 score:200.6 best_domain_score:200.4 name:PMSR;
sprot_desc Peptide methionine sulfoxide reductase MsrA;
sprot_id sp|Q92AE8|MSRA_LISIN;
sprot_target db:uniprot_sprot|sp|Q92AE8|MSRA_LISIN 4 173 evalue:7.6e-73 qcov:96.00 identity:74.10;
tigrfam_acc TIGR00401;
tigrfam_desc peptide-methionine (S)-S-oxide reductase;
tigrfam_mainrole Cellular processes;
tigrfam_name msrA;
tigrfam_sub1role Adaptations to atypical conditions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00401 evalue:2.5e-61 score:205.7 best_domain_score:205.4 name:TIGR00401;
2433 1159 CDS
ID metaerg.pl|13419
allec_ids 6.1.1.11;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004828; GO:0016260; GO:0097056; GO:0006434;
allko_ids K01875;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091480628.1 1 424 evalue:4.0e-214 qcov:100.00 identity:88.00;
kegg_pathway_id 00970; 00260;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Glycine, serine and threonine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
metacyc_pathway_id TRNA-CHARGING-PWY; PWY-6281; PWY0-901;
metacyc_pathway_name tRNA charging;; L-selenocysteine biosynthesis II (archaea and eukaryotes);; L-selenocysteine biosynthesis I (bacteria);;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;; Selenocysteine-Biosynthesis;; Selenocysteine-Biosynthesis;;
pfam_acc PF02403; PF00587;
pfam_desc Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T);
pfam_id Seryl_tRNA_N; tRNA-synt_2b;
pfam_target db:Pfam-A.hmm|PF02403.22 evalue:4e-30 score:103.5 best_domain_score:103.5 name:Seryl_tRNA_N; db:Pfam-A.hmm|PF00587.25 evalue:6.3e-34 score:116.7 best_domain_score:116.2 name:tRNA-synt_2b;
sprot_desc Serine--tRNA ligase;
sprot_id sp|Q3K326|SYS_STRA1;
sprot_target db:uniprot_sprot|sp|Q3K326|SYS_STRA1 1 424 evalue:7.7e-156 qcov:100.00 identity:64.60;
tigrfam_acc TIGR00414;
tigrfam_desc serine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name serS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00414 evalue:2.6e-173 score:576.0 best_domain_score:575.8 name:TIGR00414;
4083 2764 CDS
ID metaerg.pl|13420
allec_ids 3.4.16.4;
allgo_ids GO:0006508; GO:0009002; GO:0005618; GO:0005576; GO:0071555; GO:0009252; GO:0008360; GO:0030435;
allko_ids K01286; K07258;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091480631.1 3 439 evalue:1.3e-196 qcov:99.50 identity:77.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
metacyc_pathway_id PEPTIDOGLYCANSYN-PWY; PWY-6471; PWY-5265;
metacyc_pathway_name peptidoglycan biosynthesis I (meso-diaminopimelate containing);; peptidoglycan biosynthesis IV (Enterococcus faecium);; peptidoglycan biosynthesis II (staphylococci);;
metacyc_pathway_type Peptidoglycan-Biosynthesis; Super-Pathways;; Antibiotic-Resistance; Peptidoglycan-Biosynthesis; Super-Pathways;; Peptidoglycan-Biosynthesis; Super-Pathways;;
pfam_acc PF13354; PF07943; PF00768;
pfam_desc Beta-lactamase enzyme family; Penicillin-binding protein 5, C-terminal domain; D-alanyl-D-alanine carboxypeptidase;
pfam_id Beta-lactamase2; PBP5_C; Peptidase_S11;
pfam_target db:Pfam-A.hmm|PF13354.6 evalue:8e-10 score:37.9 best_domain_score:37.5 name:Beta-lactamase2; db:Pfam-A.hmm|PF07943.13 evalue:2.5e-05 score:23.7 best_domain_score:22.8 name:PBP5_C; db:Pfam-A.hmm|PF00768.20 evalue:4.6e-73 score:244.8 best_domain_score:244.4 name:Peptidase_S11;
sp YES;
sprot_desc D-alanyl-D-alanine carboxypeptidase DacA;
sprot_id sp|Q05523|DACA_GEOSE;
sprot_target db:uniprot_sprot|sp|Q05523|DACA_GEOSE 5 416 evalue:2.4e-88 qcov:93.80 identity:43.30;
2764 2853 signal_peptide
ID metaerg.pl|13421
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
5397 4276 CDS
ID metaerg.pl|13422
allgo_ids GO:0000155; GO:0007165;
allko_ids K07708; K07645; K07677; K08282; K10909; K07704; K11231; K07643; K02491; K11711; K07642; K02484; K11640; K11356; K11633; K07768; K11354; K07778; K11328; K13533; K08884; K00873; K07711; K07648; K02478; K07679; K07698; K07718; K07651; K07777; K07649; K00936; K07682; K07654; K07637; K03407; K07673; K08475; K07639; K07646; K07641; K13598; K07652; K07769; K14509; K11520; K11383; K02486; K12767; K11357; K10125; K11629; K04757; K10942; K13040; K07647; K07717; K07675; K01769; K07676; K10681; K06379; K07650; K13532; K07709; K07644; K02480; K14489; K08801; K02482; K07636; K07638; K07653; K13587; K11527; K02030; K07678; K10715; K03388; K02668; K10916; K08479; K07674; K07716; K07697; K02489; K01768; K07656; K07640; K07710;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195609.1 1 371 evalue:1.4e-178 qcov:99.50 identity:86.30;
kegg_pathway_id 00010; 00710; 05111; 00230; 00620; 03090; 02020; 04011; 00790;
kegg_pathway_name Glycolysis / Gluconeogenesis; Carbon fixation in photosynthetic organisms; Vibrio cholerae pathogenic cycle; Purine metabolism; Pyruvate metabolism; Type II secretion system; Two-component system - General; MAPK signaling pathway - yeast; Folate biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
pfam_acc PF02518; PF14501; PF00512;
pfam_desc Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GHKL domain; His Kinase A (phospho-acceptor) domain;
pfam_id HATPase_c; HATPase_c_5; HisKA;
pfam_target db:Pfam-A.hmm|PF02518.26 evalue:1.3e-21 score:76.4 best_domain_score:75.2 name:HATPase_c; db:Pfam-A.hmm|PF14501.6 evalue:1.3e-08 score:33.9 best_domain_score:32.6 name:HATPase_c_5; db:Pfam-A.hmm|PF00512.25 evalue:1.1e-14 score:53.5 best_domain_score:51.9 name:HisKA;
tm_num 2;
5397 4276 transmembrane_helix
ID metaerg.pl|13423
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
topology i4312-4380o4462-4530i;
6099 5416 CDS
ID metaerg.pl|13424
allgo_ids GO:0000160; GO:0005737; GO:0003677; GO:0071555; GO:0006355; GO:0046677;
allko_ids K02489; K07716; K07710; K01768; K02668; K03388; K08479; K10916; K11527; K07678; K10715; K02482; K02480; K07653; K07638; K07636; K07644; K07676; K10681; K06379; K07647; K07717; K07675; K11383; K13761; K02486; K12767; K04757; K11357; K10125; K07646; K07641; K07673; K01120; K07639; K08475; K07652; K07654; K07682; K03407; K07637; K02478; K07679; K07648; K07651; K07718; K11354; K07778; K07768; K07711; K02484; K00760; K11356; K11640; K11711; K07642; K11231; K02491; K07645; K07677; K07708; K07704; K08282; K01937;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195599.1 1 227 evalue:6.4e-118 qcov:100.00 identity:93.80;
kegg_pathway_id 04011; 02020; 03090; 00790; 00983; 00230; 05111; 00240;
kegg_pathway_name MAPK signaling pathway - yeast; Two-component system - General; Type II secretion system; Folate biosynthesis; Drug metabolism - other enzymes; Purine metabolism; Vibrio cholerae pathogenic cycle; Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
pfam_acc PF00072; PF00486;
pfam_desc Response regulator receiver domain; Transcriptional regulatory protein, C terminal;
pfam_id Response_reg; Trans_reg_C;
pfam_target db:Pfam-A.hmm|PF00072.24 evalue:3.6e-29 score:100.4 best_domain_score:99.7 name:Response_reg; db:Pfam-A.hmm|PF00486.28 evalue:1.8e-22 score:78.4 best_domain_score:77.6 name:Trans_reg_C;
sprot_desc Regulatory protein VanR;
sprot_id sp|Q06239|VANR_ENTFC;
sprot_target db:uniprot_sprot|sp|Q06239|VANR_ENTFC 2 226 evalue:3.1e-47 qcov:99.10 identity:42.50;
7894 6212 CDS
ID metaerg.pl|13425
allgo_ids GO:0016787; GO:0008777; GO:0006526;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195597.1 10 558 evalue:1.0e-265 qcov:98.00 identity:81.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
pfam_acc PF01546;
pfam_desc Peptidase family M20/M25/M40;
pfam_id Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF01546.28 evalue:8.3e-10 score:37.9 best_domain_score:37.1 name:Peptidase_M20;
sprot_desc hypothetical protein;
sprot_id sp|P39635|ROCB_BACSU;
sprot_target db:uniprot_sprot|sp|P39635|ROCB_BACSU 7 558 evalue:1.3e-94 qcov:98.60 identity:34.10;
8194 7895 CDS
ID metaerg.pl|13426
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
9439 8255 CDS
ID metaerg.pl|13427
allec_ids 3.5.1.14;
allgo_ids GO:0016787; GO:0004046;
allko_ids K01451;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091266508.1 5 390 evalue:3.1e-189 qcov:98.00 identity:83.40;
kegg_pathway_id 00360;
kegg_pathway_name Phenylalanine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:1e-14 score:53.6 best_domain_score:52.2 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:9.1e-28 score:96.6 best_domain_score:96.3 name:Peptidase_M20;
sprot_desc N-acyl-L-amino acid amidohydrolase;
sprot_id sp|P37112|AMAA_GEOSE;
sprot_target db:uniprot_sprot|sp|P37112|AMAA_GEOSE 5 306 evalue:1.2e-73 qcov:76.60 identity:43.70;
tigrfam_acc TIGR01891;
tigrfam_desc amidohydrolase;
tigrfam_mainrole Protein fate;
tigrfam_name amidohydrolases;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01891 evalue:4.4e-111 score:370.7 best_domain_score:370.5 name:TIGR01891;
10177 9581 CDS
ID metaerg.pl|13428
allec_ids 3.4.22.-;
allgo_ids GO:0016021; GO:0005886; GO:0008234;
allko_ids K07284;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034302811.1 1 196 evalue:2.4e-84 qcov:99.00 identity:78.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
pfam_acc PF04203;
pfam_desc Sortase domain;
pfam_id Sortase;
pfam_target db:Pfam-A.hmm|PF04203.13 evalue:2.5e-24 score:84.7 best_domain_score:84.0 name:Sortase;
sp YES;
sprot_desc Sortase D;
sprot_id sp|P54603|SRTD_BACSU;
sprot_target db:uniprot_sprot|sp|P54603|SRTD_BACSU 8 191 evalue:7.5e-37 qcov:92.90 identity:43.90;
tigrfam_acc TIGR01076;
tigrfam_desc sortase;
tigrfam_mainrole Protein fate;
tigrfam_name sortase_fam;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01076 evalue:4.8e-25 score:87.1 best_domain_score:86.6 name:TIGR01076;
tm_num 1;
9581 9691 signal_peptide
ID metaerg.pl|13429
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
10177 9581 transmembrane_helix
ID metaerg.pl|13430
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
topology i9599-9652o;
10810 10493 CDS
ID metaerg.pl|13431
allgo_ids GO:0045454; GO:0009507; GO:0009570; GO:0005737; GO:0008047; GO:0016671; GO:0015035; GO:0047134; GO:0043085;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091266490.1 1 105 evalue:1.4e-27 qcov:100.00 identity:55.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
pfam_acc PF00085; PF13098;
pfam_desc Thioredoxin; Thioredoxin-like domain;
pfam_id Thioredoxin; Thioredoxin_2;
pfam_target db:Pfam-A.hmm|PF00085.20 evalue:6.4e-22 score:76.7 best_domain_score:76.6 name:Thioredoxin; db:Pfam-A.hmm|PF13098.6 evalue:1.5e-07 score:31.1 best_domain_score:27.5 name:Thioredoxin_2;
sprot_desc Thioredoxin X, chloroplastic;
sprot_id sp|Q8LD49|TRXX_ARATH;
sprot_target db:uniprot_sprot|sp|Q8LD49|TRXX_ARATH 4 100 evalue:2.3e-08 qcov:92.40 identity:34.00;
11130 10831 CDS
ID metaerg.pl|13432
allgo_ids GO:0005886;
allko_ids K08998;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091480650.1 1 98 evalue:2.6e-39 qcov:99.00 identity:75.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
pfam_acc PF01809;
pfam_desc Putative membrane protein insertion efficiency factor;
pfam_id YidD;
pfam_target db:Pfam-A.hmm|PF01809.18 evalue:7.3e-30 score:101.9 best_domain_score:101.7 name:YidD;
sprot_desc Putative membrane protein insertion efficiency factor;
sprot_id sp|B3WDM3|YIDD_LACCB;
sprot_target db:uniprot_sprot|sp|B3WDM3|YIDD_LACCB 1 94 evalue:9.2e-28 qcov:94.90 identity:57.40;
tigrfam_acc TIGR00278;
tigrfam_desc putative membrane protein insertion efficiency factor;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00278;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00278 evalue:1.4e-28 score:97.7 best_domain_score:97.4 name:TIGR00278;
11468 11244 CDS
ID metaerg.pl|13433
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium sp000585255;
genomedb_acc GCF_000585255.1;
genomedb_target db:genomedb|GCF_000585255.1|WP_034302806.1 1 74 evalue:1.4e-21 qcov:100.00 identity:74.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
pfam_acc PF11148;
pfam_desc Protein of unknown function (DUF2922);
pfam_id DUF2922;
pfam_target db:Pfam-A.hmm|PF11148.8 evalue:1.9e-21 score:74.8 best_domain_score:74.5 name:DUF2922;
11878 11495 CDS
ID metaerg.pl|13434
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
12349 11915 CDS
ID metaerg.pl|13435
allko_ids K01759;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091480658.1 1 144 evalue:5.4e-54 qcov:100.00 identity:70.80;
kegg_pathway_id 00620; 04011;
kegg_pathway_name Pyruvate metabolism; MAPK signaling pathway - yeast;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
pfam_acc PF00903;
pfam_desc Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily;
pfam_id Glyoxalase;
pfam_target db:Pfam-A.hmm|PF00903.25 evalue:3.8e-09 score:36.0 best_domain_score:35.6 name:Glyoxalase;
12936 12346 CDS
ID metaerg.pl|13436
allec_ids 3.2.2.20;
allgo_ids GO:0006284; GO:0008725; GO:0046872;
allko_ids K01246;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium thalassium;
genomedb_acc GCF_900101165.1;
genomedb_target db:genomedb|GCF_900101165.1|WP_091266480.1 3 196 evalue:9.5e-78 qcov:99.00 identity:71.60;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
pfam_acc PF03352;
pfam_desc Methyladenine glycosylase;
pfam_id Adenine_glyco;
pfam_target db:Pfam-A.hmm|PF03352.13 evalue:7.2e-83 score:275.9 best_domain_score:275.7 name:Adenine_glyco;
sprot_desc DNA-3-methyladenine glycosylase;
sprot_id sp|P44321|3MGA_HAEIN;
sprot_target db:uniprot_sprot|sp|P44321|3MGA_HAEIN 1 182 evalue:1.4e-56 qcov:92.90 identity:53.80;
tigrfam_acc TIGR00624;
tigrfam_desc DNA-3-methyladenine glycosylase I;
tigrfam_mainrole DNA metabolism;
tigrfam_name tag;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00624 evalue:3.5e-75 score:250.8 best_domain_score:250.6 name:TIGR00624;
13439 13023 CDS
ID metaerg.pl|13437
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium pelagium;
genomedb_acc GCF_900109325.1;
genomedb_target db:genomedb|GCF_900109325.1|WP_091480663.1 1 138 evalue:1.8e-46 qcov:100.00 identity:71.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
tm_num 3;
13439 13023 transmembrane_helix
ID metaerg.pl|13438
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
topology i13047-13106o13260-13328i13332-13400o;
13521 14333 CDS
ID metaerg.pl|13439
allgo_ids GO:0003677; GO:0006355;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195566.1 1 270 evalue:1.5e-86 qcov:100.00 identity:61.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.112458; 2.76584; 58.6271; ; 61.5054;
pfam_acc PF00376; PF13411;
pfam_desc MerR family regulatory protein; MerR HTH family regulatory protein;
pfam_id MerR; MerR_1;
pfam_target db:Pfam-A.hmm|PF00376.23 evalue:2e-10 score:39.5 best_domain_score:38.6 name:MerR; db:Pfam-A.hmm|PF13411.6 evalue:6.9e-16 score:57.3 best_domain_score:56.1 name:MerR_1;
>Feature NODE_5401_length_13876_cov_89.7481
966 445 CDS
ID metaerg.pl|13440
allgo_ids GO:0006397; GO:0000262; GO:0003677; GO:0004519; GO:0006315;
genomedb_OC d__Eukaryota;no__Opisthokonta;p__Ascomycota;c__Schizosaccharomycetes;o__Schizosaccharomycetales;f__Schizosaccharomycetaceae;g__Schizosaccharomyces;s__Schizosaccharomyces pombe;;
genomedb_acc GCF_000002945.1;
genomedb_target db:genomedb|GCF_000002945.1|NP_039503.1 6 173 evalue:6.8e-11 qcov:97.10 identity:29.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
pfam_acc PF01348;
pfam_desc Type II intron maturase;
pfam_id Intron_maturas2;
pfam_target db:Pfam-A.hmm|PF01348.21 evalue:5.4e-16 score:58.1 best_domain_score:57.5 name:Intron_maturas2;
sprot_desc Uncharacterized 91 kDa protein in cob intron;
sprot_id sp|P05511|YMC6_SCHPO;
sprot_target db:uniprot_sprot|sp|P05511|YMC6_SCHPO 6 173 evalue:5.0e-13 qcov:97.10 identity:29.60;
1476 1225 CDS
ID metaerg.pl|13441
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
2708 1473 CDS
ID metaerg.pl|13442
casgene_acc pfam00078_RT_CAS-I:CAS-III;
casgene_name RT;
casgene_target db:casgenes.hmm|pfam00078_RT_CAS-I:CAS-III evalue:3e-35 score:121.0 best_domain_score:120.3 name:RT;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
pfam_acc PF00078;
pfam_desc Reverse transcriptase (RNA-dependent DNA polymerase);
pfam_id RVT_1;
pfam_target db:Pfam-A.hmm|PF00078.27 evalue:8.4e-24 score:83.5 best_domain_score:82.5 name:RVT_1;
3729 3805 tRNA
ID metaerg.pl|13443
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
name tRNA_Ile_gat;
3839 3911 tRNA
ID metaerg.pl|13444
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
name tRNA_Ala_tgc;
4379 5628 bac_23SrRNA
ID metaerg.pl|13445
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
5728 7327 bac_23SrRNA
ID metaerg.pl|13446
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
7615 8343 CDS
ID metaerg.pl|13447
allgo_ids GO:0004519;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
pfam_acc PF03161;
pfam_desc LAGLIDADG DNA endonuclease family;
pfam_id LAGLIDADG_2;
pfam_target db:Pfam-A.hmm|PF03161.13 evalue:5.3e-18 score:64.8 best_domain_score:64.4 name:LAGLIDADG_2;
9061 9267 CDS
ID metaerg.pl|13448
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
9354 9653 CDS
ID metaerg.pl|13449
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
tm_num 1;
9354 9653 transmembrane_helix
ID metaerg.pl|13450
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
topology i9462-9521o;
9643 9993 CDS
ID metaerg.pl|13451
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
10271 10504 CDS
ID metaerg.pl|13452
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
tm_num 1;
10271 10504 transmembrane_helix
ID metaerg.pl|13453
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
topology o10364-10432i;
10693 10621 tRNA
ID metaerg.pl|13454
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
name tRNA_Asn_gtt;
11224 11039 CDS
ID metaerg.pl|13455
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
11699 11618 tRNA
ID metaerg.pl|13456
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
name tRNA_Tyr_gta;
12013 11941 tRNA
ID metaerg.pl|13457
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
name tRNA_Trp_cca;
12522 12449 tRNA
ID metaerg.pl|13458
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
name tRNA_Arg_acg;
12855 12613 CDS
ID metaerg.pl|13459
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
12985 12911 tRNA
ID metaerg.pl|13460
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
name tRNA_Thr_tgt;
13332 13260 tRNA
ID metaerg.pl|13461
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 989.516; 0.50102; 990.017; ;
name tRNA_Cys_gca;
>Feature NODE_5721_length_13422_cov_7.02155
2 286 CDS
ID metaerg.pl|13462
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
890 654 CDS
ID metaerg.pl|13463
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000234.1_44 1 78 evalue:3.5e-07 qcov:100.00 identity:41.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
1486 887 CDS
ID metaerg.pl|13464
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000234.1_45 3 171 evalue:1.1e-57 qcov:84.90 identity:67.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
pfam_acc PF00132;
pfam_desc Bacterial transferase hexapeptide (six repeats);
pfam_id Hexapep;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:4.8e-16 score:57.0 best_domain_score:29.7 name:Hexapep;
sprot_desc hypothetical protein;
sprot_id sp|P40882|Y3753_PSEAE;
sprot_target db:uniprot_sprot|sp|P40882|Y3753_PSEAE 4 162 evalue:2.2e-20 qcov:79.90 identity:42.10;
2794 1529 CDS
ID metaerg.pl|13465
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000003.1_68 1 408 evalue:8.8e-113 qcov:96.90 identity:57.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
pfam_acc PF00571; PF03471; PF01595;
pfam_desc CBS domain; Transporter associated domain; Cyclin M transmembrane N-terminal domain;
pfam_id CBS; CorC_HlyC; DUF21;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:8.3e-06 score:25.4 best_domain_score:15.1 name:CBS; db:Pfam-A.hmm|PF03471.17 evalue:1.9e-14 score:52.7 best_domain_score:51.8 name:CorC_HlyC; db:Pfam-A.hmm|PF01595.20 evalue:5.8e-27 score:93.7 best_domain_score:93.0 name:DUF21;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P74078|Y1254_SYNY3;
sprot_target db:uniprot_sprot|sp|P74078|Y1254_SYNY3 4 325 evalue:5.3e-32 qcov:76.50 identity:32.10;
tm_num 4;
1529 1600 signal_peptide
ID metaerg.pl|13466
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
2794 1529 transmembrane_helix
ID metaerg.pl|13467
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
topology o1541-1609i1712-1780o1790-1843i1880-1933o;
3895 2879 CDS
ID metaerg.pl|13468
allgo_ids GO:0005524; GO:0016887;
allko_ids K03924;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002712565;
genomedb_acc GCA_002712565.1;
genomedb_target db:genomedb|GCA_002712565.1|MBD49547.1 7 336 evalue:6.3e-130 qcov:97.60 identity:71.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
pfam_acc PF00004; PF07726; PF07728; PF17863;
pfam_desc ATPase family associated with various cellular activities (AAA); ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily); AAA lid domain;
pfam_id AAA; AAA_3; AAA_5; AAA_lid_2;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:0.00016 score:21.3 best_domain_score:20.3 name:AAA; db:Pfam-A.hmm|PF07726.11 evalue:1.3e-63 score:211.9 best_domain_score:211.6 name:AAA_3; db:Pfam-A.hmm|PF07728.14 evalue:2e-13 score:49.7 best_domain_score:49.0 name:AAA_5; db:Pfam-A.hmm|PF17863.1 evalue:1.6e-12 score:46.3 best_domain_score:46.3 name:AAA_lid_2;
sprot_desc hypothetical protein;
sprot_id sp|P94474|YEAC_BACSU;
sprot_target db:uniprot_sprot|sp|P94474|YEAC_BACSU 29 330 evalue:3.7e-60 qcov:89.30 identity:42.90;
4262 4534 CDS
ID metaerg.pl|13469
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000008.1_12 6 83 evalue:8.9e-15 qcov:86.70 identity:57.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
pfam_acc PF09527;
pfam_desc Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter;
pfam_id ATPase_gene1;
pfam_target db:Pfam-A.hmm|PF09527.10 evalue:5.7e-16 score:57.7 best_domain_score:57.5 name:ATPase_gene1;
tm_num 2;
4262 4534 transmembrane_helix
ID metaerg.pl|13470
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
topology i4322-4390o4418-4486i;
4531 4917 CDS
ID metaerg.pl|13471
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000044.1_5 5 115 evalue:4.4e-07 qcov:86.70 identity:42.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
tm_num 4;
4531 4917 transmembrane_helix
ID metaerg.pl|13472
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
topology i4543-4611o4624-4692i4711-4779o4807-4866i;
4914 5810 CDS
ID metaerg.pl|13473
allec_ids 3.6.3.14;
allgo_ids GO:0015078; GO:0015986; GO:0045263; GO:0016021; GO:0005886; GO:0046933;
allko_ids K12524; K02126; K02108;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000019.1_37 22 298 evalue:8.4e-86 qcov:93.00 identity:63.00;
kegg_pathway_id 00195; 00190; 05012;
kegg_pathway_name Photosynthesis; Oxidative phosphorylation; Parkinson's disease;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
metacyc_pathway_id PRPP-PWY; PWY-6126; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00119;
pfam_desc ATP synthase A chain;
pfam_id ATP-synt_A;
pfam_target db:Pfam-A.hmm|PF00119.20 evalue:5.4e-50 score:169.5 best_domain_score:169.3 name:ATP-synt_A;
sprot_desc ATP synthase subunit a 2;
sprot_id sp|B3QLV3|ATP62_CHLP8;
sprot_target db:uniprot_sprot|sp|B3QLV3|ATP62_CHLP8 24 293 evalue:7.3e-44 qcov:90.60 identity:41.70;
tigrfam_acc TIGR01131;
tigrfam_desc ATP synthase F0, A subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATP_synt_6_or_A;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01131 evalue:1.3e-36 score:125.8 best_domain_score:125.1 name:TIGR01131;
tm_num 6;
4914 5810 transmembrane_helix
ID metaerg.pl|13474
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
topology i5112-5180o5295-5363i5382-5450o5493-5561i5619-5687o5730-5798i;
5920 6204 CDS
ID metaerg.pl|13475
allec_ids 3.6.3.14;
allgo_ids GO:0015078; GO:0033177;
allko_ids K00872; K02155; K02128; K02110; K03661; K02124;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89610.1 1 94 evalue:5.1e-21 qcov:100.00 identity:67.00;
kegg_pathway_id 00190; 05012; 00260; 00195;
kegg_pathway_name Oxidative phosphorylation; Parkinson's disease; Glycine, serine and threonine metabolism; Photosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
metacyc_pathway_id PWY-6126; PRPP-PWY; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00137;
pfam_desc ATP synthase subunit C;
pfam_id ATP-synt_C;
pfam_target db:Pfam-A.hmm|PF00137.21 evalue:2.4e-14 score:52.6 best_domain_score:52.3 name:ATP-synt_C;
tigrfam_acc TIGR01260;
tigrfam_desc ATP synthase F0, C subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATP_synt_c;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01260 evalue:1.3e-14 score:53.1 best_domain_score:53.1 name:TIGR01260;
tm_num 2;
5920 6204 transmembrane_helix
ID metaerg.pl|13476
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
topology o5995-6063i6124-6192o;
6423 6917 CDS
ID metaerg.pl|13477
allec_ids 3.6.3.14;
allgo_ids GO:0015078; GO:0015986; GO:0045263;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC04991.1 3 157 evalue:3.0e-32 qcov:94.50 identity:51.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
metacyc_pathway_id DENOVOPURINE2-PWY; PRPP-PWY; PWY-6126;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00430;
pfam_desc ATP synthase B/B' CF(0);
pfam_id ATP-synt_B;
pfam_target db:Pfam-A.hmm|PF00430.18 evalue:6.7e-31 score:106.3 best_domain_score:106.1 name:ATP-synt_B;
tigrfam_acc TIGR01144;
tigrfam_desc ATP synthase F0, B subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATP_synt_b;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01144 evalue:3.5e-30 score:104.0 best_domain_score:103.7 name:TIGR01144;
tm_num 1;
6423 6917 transmembrane_helix
ID metaerg.pl|13478
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
topology o6435-6503i;
6920 7480 CDS
ID metaerg.pl|13479
allec_ids 3.6.3.14;
allgo_ids GO:0015986; GO:0046933; GO:0005886; GO:0045261;
allko_ids K02113;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002501085;
genomedb_acc GCA_002501085.1;
genomedb_target db:genomedb|GCA_002501085.1|DLRL01000087.1_27 1 185 evalue:5.0e-44 qcov:99.50 identity:48.10;
kegg_pathway_id 00195; 00190;
kegg_pathway_name Photosynthesis; Oxidative phosphorylation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6126; PRPP-PWY;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF00213;
pfam_desc ATP synthase delta (OSCP) subunit;
pfam_id OSCP;
pfam_target db:Pfam-A.hmm|PF00213.18 evalue:3.5e-43 score:146.9 best_domain_score:146.8 name:OSCP;
sprot_desc ATP synthase subunit delta;
sprot_id sp|C1ABC3|ATPD_GEMAT;
sprot_target db:uniprot_sprot|sp|C1ABC3|ATPD_GEMAT 3 176 evalue:6.8e-32 qcov:93.50 identity:40.80;
tigrfam_acc TIGR01145;
tigrfam_desc ATP synthase F1, delta subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATP_synt_delta;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01145 evalue:6.9e-37 score:126.5 best_domain_score:126.3 name:TIGR01145;
7487 9049 CDS
ID metaerg.pl|13480
allec_ids 7.1.2.2; 3.6.3.14;
allgo_ids GO:0005524; GO:0005886; GO:0045261; GO:0046933; GO:0015986;
allko_ids K02111;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002500925;
genomedb_acc GCA_002500925.1;
genomedb_target db:genomedb|GCA_002500925.1|DLTN01000116.1_88 1 520 evalue:1.8e-229 qcov:100.00 identity:79.80;
kegg_pathway_id 00190; 00195;
kegg_pathway_name Oxidative phosphorylation; Photosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
metacyc_pathway_id DENOVOPURINE2-PWY; PRPP-PWY; PWY-6126;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00006; PF00306; PF02874;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, beta-barrel domain;
pfam_id ATP-synt_ab; ATP-synt_ab_C; ATP-synt_ab_N;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:1.4e-71 score:239.8 best_domain_score:239.1 name:ATP-synt_ab; db:Pfam-A.hmm|PF00306.27 evalue:3.4e-52 score:175.3 best_domain_score:174.6 name:ATP-synt_ab_C; db:Pfam-A.hmm|PF02874.23 evalue:7e-14 score:51.3 best_domain_score:50.1 name:ATP-synt_ab_N;
sprot_desc ATP synthase subunit alpha;
sprot_id sp|Q3A944|ATPA_CARHZ;
sprot_target db:uniprot_sprot|sp|Q3A944|ATPA_CARHZ 8 511 evalue:1.2e-187 qcov:96.90 identity:67.50;
tigrfam_acc TIGR00962;
tigrfam_desc ATP synthase F1, alpha subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name atpA;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR00962 evalue:6.2e-242 score:802.9 best_domain_score:802.6 name:TIGR00962;
9180 9965 CDS
ID metaerg.pl|13481
allec_ids 3.6.3.14;
allgo_ids GO:0015986; GO:0045261; GO:0046933; GO:0005886; GO:0005524; GO:0042777;
allko_ids K02115;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA887;s__UBA887 sp002311875;
genomedb_acc GCA_002311875.1;
genomedb_target db:genomedb|GCA_002311875.1|DCAD01000019.1_32 1 261 evalue:8.4e-90 qcov:100.00 identity:67.00;
kegg_pathway_id 00195; 00190;
kegg_pathway_name Photosynthesis; Oxidative phosphorylation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
metacyc_pathway_id PWY-6126; PRPP-PWY; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00231;
pfam_desc ATP synthase;
pfam_id ATP-synt;
pfam_target db:Pfam-A.hmm|PF00231.19 evalue:6.4e-77 score:258.2 best_domain_score:258.1 name:ATP-synt;
sprot_desc ATP synthase gamma chain;
sprot_id sp|C1A697|ATPG_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A697|ATPG_GEMAT 1 259 evalue:1.0e-78 qcov:99.20 identity:59.70;
tigrfam_acc TIGR01146;
tigrfam_desc ATP synthase F1, gamma subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATPsyn_F1gamma;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01146 evalue:4.4e-77 score:258.8 best_domain_score:258.7 name:TIGR01146;
10052 11506 CDS
ID metaerg.pl|13482
allec_ids 7.1.2.2; 3.6.3.14;
allgo_ids GO:0005524; GO:0005886; GO:0045261; GO:0046933; GO:0015986;
allko_ids K02112;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000036.1_4 7 483 evalue:2.6e-230 qcov:98.60 identity:84.70;
kegg_pathway_id 00195; 00190;
kegg_pathway_name Photosynthesis; Oxidative phosphorylation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6126; PRPP-PWY;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF00006; PF02874;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta family, beta-barrel domain;
pfam_id ATP-synt_ab; ATP-synt_ab_N;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:3.9e-66 score:222.0 best_domain_score:221.6 name:ATP-synt_ab; db:Pfam-A.hmm|PF02874.23 evalue:5.3e-22 score:77.3 best_domain_score:76.1 name:ATP-synt_ab_N;
sprot_desc ATP synthase subunit beta;
sprot_id sp|A5G9D8|ATPB_GEOUR;
sprot_target db:uniprot_sprot|sp|A5G9D8|ATPB_GEOUR 10 480 evalue:8.7e-196 qcov:97.30 identity:72.20;
tigrfam_acc TIGR01039;
tigrfam_desc ATP synthase F1, beta subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name atpD;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01039 evalue:1.6e-247 score:820.9 best_domain_score:820.7 name:TIGR01039;
11508 11855 CDS
ID metaerg.pl|13483
allec_ids 3.6.3.14;
allgo_ids GO:0015986; GO:0005886; GO:0045261; GO:0005524; GO:0046933;
allko_ids K02114;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000036.1_5 5 115 evalue:3.5e-24 qcov:96.50 identity:54.10;
kegg_pathway_id 00195; 00190;
kegg_pathway_name Photosynthesis; Oxidative phosphorylation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
metacyc_pathway_id DENOVOPURINE2-PWY; PRPP-PWY; PWY-6126;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF02823;
pfam_desc ATP synthase, Delta/Epsilon chain, beta-sandwich domain;
pfam_id ATP-synt_DE_N;
pfam_target db:Pfam-A.hmm|PF02823.16 evalue:8.1e-23 score:79.4 best_domain_score:79.2 name:ATP-synt_DE_N;
sprot_desc ATP synthase epsilon chain;
sprot_id sp|B9MBA4|ATPE_ACIET;
sprot_target db:uniprot_sprot|sp|B9MBA4|ATPE_ACIET 4 84 evalue:1.7e-09 qcov:70.40 identity:38.30;
tigrfam_acc TIGR01216;
tigrfam_desc ATP synthase F1, epsilon subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATP_synt_epsi;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01216 evalue:1.5e-21 score:75.9 best_domain_score:75.6 name:TIGR01216;
11856 12671 CDS
ID metaerg.pl|13484
allec_ids 3.1.13.-;
allgo_ids GO:0003824; GO:0035312; GO:0004534; GO:0046872; GO:0000166;
allko_ids K02337; K04486; K02323; K07053;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2589;s__UBA2589 sp002390225;
genomedb_acc GCA_002390225.1;
genomedb_target db:genomedb|GCA_002390225.1|DGOW01000085.1_40 1 271 evalue:9.4e-76 qcov:100.00 identity:54.80;
kegg_pathway_id 03030; 00340;
kegg_pathway_name DNA replication; Histidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
pfam_acc PF02811;
pfam_desc PHP domain;
pfam_id PHP;
pfam_target db:Pfam-A.hmm|PF02811.19 evalue:1.1e-09 score:38.0 best_domain_score:37.9 name:PHP;
sprot_desc 5'-3' exoribonuclease;
sprot_id sp|P44176|RNAAM_HAEIN;
sprot_target db:uniprot_sprot|sp|P44176|RNAAM_HAEIN 4 247 evalue:1.9e-30 qcov:90.00 identity:33.30;
12973 13421 bac_23SrRNA
ID metaerg.pl|13485
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.4289; 0.032173; 11.897; ; 1.4997;
rRNA_target rRNA_target=db:silva_LSURef.fasta|DQ295242.20797.23768 11 449 evalue:1.55e-112 qcov:98 identity:83.857;
rRNA_taxon Bacteria;Gemmatimonadetes;
>Feature NODE_5836_length_13249_cov_52.6354
758 1 bac_16SrRNA
ID metaerg.pl|13486
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|MEHT01000048.404.1852 1 754 evalue:0.0 qcov:99 identity:97.878;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseinatronobacter;
1359 1805 CDS
ID metaerg.pl|13487
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468181.1 1 144 evalue:1.1e-54 qcov:97.30 identity:77.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
pfam_acc PF03625;
pfam_desc Domain of unknown function DUF302;
pfam_id DUF302;
pfam_target db:Pfam-A.hmm|PF03625.14 evalue:2.4e-05 score:23.3 best_domain_score:22.5 name:DUF302;
sp YES;
1359 1418 signal_peptide
ID metaerg.pl|13488
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
2000 2482 CDS
ID metaerg.pl|13489
allgo_ids GO:0005615; GO:0030288;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479548.1 1 160 evalue:8.3e-64 qcov:100.00 identity:85.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
pfam_acc PF02469;
pfam_desc Fasciclin domain;
pfam_id Fasciclin;
pfam_target db:Pfam-A.hmm|PF02469.22 evalue:9.4e-38 score:128.6 best_domain_score:128.2 name:Fasciclin;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P74615|Y1483_SYNY3;
sprot_target db:uniprot_sprot|sp|P74615|Y1483_SYNY3 4 159 evalue:1.9e-30 qcov:97.50 identity:52.00;
2000 2068 signal_peptide
ID metaerg.pl|13490
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
2631 3992 CDS
ID metaerg.pl|13491
allgo_ids GO:0016021; GO:0055085;
allko_ids K08219; K08217; K06902;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468182.1 1 453 evalue:2.2e-223 qcov:100.00 identity:85.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
pfam_acc PF11700; PF07690;
pfam_desc Vacuole effluxer Atg22 like; Major Facilitator Superfamily;
pfam_id ATG22; MFS_1;
pfam_target db:Pfam-A.hmm|PF11700.8 evalue:3.1e-33 score:114.3 best_domain_score:102.5 name:ATG22; db:Pfam-A.hmm|PF07690.16 evalue:4.6e-10 score:38.2 best_domain_score:23.9 name:MFS_1;
tm_num 12;
2631 3992 transmembrane_helix
ID metaerg.pl|13492
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
topology i2664-2732o2775-2843i2868-2927o2940-3008i3066-3134o3207-3275i3369-3437o3465-3533i3570-3623o3681-3740i3801-3869o3882-3941i;
3968 4852 CDS
ID metaerg.pl|13493
allec_ids 3.4.24.-;
allgo_ids GO:0004252; GO:0006508; GO:0030288; GO:0046872; GO:0008237;
allko_ids K07261;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479546.1 1 294 evalue:3.2e-154 qcov:100.00 identity:88.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
pfam_acc PF03411;
pfam_desc Penicillin-insensitive murein endopeptidase;
pfam_id Peptidase_M74;
pfam_target db:Pfam-A.hmm|PF03411.13 evalue:5.7e-98 score:326.5 best_domain_score:326.3 name:Peptidase_M74;
sp YES;
sprot_desc Penicillin-insensitive murein endopeptidase;
sprot_id sp|P44566|MEPA_HAEIN;
sprot_target db:uniprot_sprot|sp|P44566|MEPA_HAEIN 41 293 evalue:7.7e-46 qcov:86.10 identity:40.70;
3968 4036 signal_peptide
ID metaerg.pl|13494
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
4992 6647 CDS
ID metaerg.pl|13495
allec_ids 3.1.3.5;
allgo_ids GO:0009166; GO:0016787; GO:0031225; GO:0008253; GO:0046872; GO:0000166;
allko_ids K11751; K01081; K08693; K06931; K08077; K01119;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_084657428.1 1 551 evalue:8.6e-278 qcov:100.00 identity:88.00;
kegg_pathway_id 00760; 00240; 00230;
kegg_pathway_name Nicotinate and nicotinamide metabolism; Pyrimidine metabolism; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
metacyc_pathway_id PWY-5044; URSIN-PWY; PWY-5695; PWY-5381; PWY-6353;
metacyc_pathway_name purine nucleotides degradation I (plants);; ureide biosynthesis;; inosine 5'-phosphate degradation;; pyridine nucleotide cycling (plants);; purine nucleotides degradation II (aerobic);;
metacyc_pathway_type Purine-Degradation; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; Purine-Degradation;; NAD-Metabolism;; Purine-Degradation; Super-Pathways;;
pfam_acc PF02872; PF00149;
pfam_desc 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase;
pfam_id 5_nucleotid_C; Metallophos;
pfam_target db:Pfam-A.hmm|PF02872.18 evalue:1.1e-39 score:135.4 best_domain_score:134.5 name:5_nucleotid_C; db:Pfam-A.hmm|PF00149.28 evalue:5.3e-08 score:32.8 best_domain_score:32.3 name:Metallophos;
sp YES;
sprot_desc Snake venom 5'-nucleotidase;
sprot_id sp|B6EWW8|V5NTD_GLOBR;
sprot_target db:uniprot_sprot|sp|B6EWW8|V5NTD_GLOBR 23 550 evalue:2.7e-92 qcov:95.80 identity:36.10;
4992 5105 signal_peptide
ID metaerg.pl|13496
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
6823 7458 CDS
ID metaerg.pl|13497
allgo_ids GO:1990397;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071467913.1 1 211 evalue:2.5e-108 qcov:100.00 identity:94.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
pfam_acc PF02592;
pfam_desc Putative vitamin uptake transporter;
pfam_id Vut_1;
pfam_target db:Pfam-A.hmm|PF02592.15 evalue:3.1e-37 score:127.4 best_domain_score:127.4 name:Vut_1;
tigrfam_acc TIGR00697;
tigrfam_desc conserved hypothetical integral membrane protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00697;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00697 evalue:7.4e-28 score:96.9 best_domain_score:92.3 name:TIGR00697;
tm_num 6;
6823 7458 transmembrane_helix
ID metaerg.pl|13498
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
topology i6835-6903o6913-6981i7000-7068o7081-7149i7210-7278o7363-7431i;
7707 8126 CDS
ID metaerg.pl|13499
allec_ids 3.1.1.29;
allgo_ids GO:0003747; GO:0006415; GO:0005737; GO:0004045;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795416.1 1 135 evalue:2.7e-55 qcov:97.10 identity:85.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
pfam_acc PF10213; PF00472;
pfam_desc Mitochondrial ribosomal subunit protein ; RF-1 domain;
pfam_id MRP-S28; RF-1;
pfam_target db:Pfam-A.hmm|PF10213.9 evalue:1.7e-05 score:24.5 best_domain_score:24.3 name:MRP-S28; db:Pfam-A.hmm|PF00472.20 evalue:2.8e-22 score:78.0 best_domain_score:77.8 name:RF-1;
sprot_desc Peptidyl-tRNA hydrolase ArfB;
sprot_id sp|P45388|ARFB_PSEPU;
sprot_target db:uniprot_sprot|sp|P45388|ARFB_PSEPU 1 133 evalue:1.1e-23 qcov:95.70 identity:48.90;
8184 8669 CDS
ID metaerg.pl|13500
allgo_ids GO:0016787;
allko_ids K08296;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386070.1 1 151 evalue:1.1e-55 qcov:93.80 identity:69.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:5.5e-08 score:32.2 best_domain_score:31.9 name:NUDIX;
8746 10212 CDS
ID metaerg.pl|13501
allgo_ids GO:0005315; GO:0006817; GO:0016020; GO:0016021; GO:0005886;
allko_ids K03306;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795413.1 1 488 evalue:1.2e-235 qcov:100.00 identity:87.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
pfam_acc PF01384;
pfam_desc Phosphate transporter family;
pfam_id PHO4;
pfam_target db:Pfam-A.hmm|PF01384.20 evalue:3.5e-104 score:347.7 best_domain_score:347.1 name:PHO4;
sprot_desc Putative phosphate permease jhp_1384;
sprot_id sp|Q9ZJC8|YE91_HELPJ;
sprot_target db:uniprot_sprot|sp|Q9ZJC8|YE91_HELPJ 15 431 evalue:4.9e-106 qcov:85.50 identity:49.80;
tm_num 13;
8746 10212 transmembrane_helix
ID metaerg.pl|13502
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
topology i8842-8910o8923-8982i9019-9087o9163-9231i9250-9318o9328-9396i9433-9501o9517-9585i9646-9705o9784-9852i9889-9957o9967-10026i10117-10185o;
13247 10290 CDS
ID metaerg.pl|13503
allec_ids 1.4.1.13;
allgo_ids GO:0016491; GO:0051538; GO:0004355; GO:0046872; GO:0006541; GO:0097054;
allko_ids K00202; K00284; K00265; K00264;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071795411.1 1 985 evalue:0.0e+00 qcov:100.00 identity:95.50;
kegg_pathway_id 00251; 00910; 00790;
kegg_pathway_name Glutamate metabolism; Nitrogen metabolism; Folate biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.4637; 62.8832; 1.00252; 0.620963; 60.796;
metacyc_pathway_id AMMASSIM-PWY; GLUTSYN-PWY; PWY-5505; GLUTAMINEFUM-PWY;
metacyc_pathway_name ammonia assimilation cycle III;; L-glutamate biosynthesis I;; L-glutamate and L-glutamine biosynthesis;; L-glutamine degradation II;;
metacyc_pathway_type Ammonia-Assimilation; Super-Pathways;; GLUTAMATE-SYN;; GLUTAMATE-SYN; GLUTAMINE-SYN; Metabolic-Clusters; Super-Pathways;; GLUTAMINE-DEG;;
pfam_acc PF01070; PF01645; PF04898; PF01493;
pfam_desc FMN-dependent dehydrogenase; Conserved region in glutamate synthase; Glutamate synthase central domain; GXGXG motif;
pfam_id FMN_dh; Glu_synthase; Glu_syn_central; GXGXG;
pfam_target db:Pfam-A.hmm|PF01070.18 evalue:5e-06 score:25.0 best_domain_score:23.2 name:FMN_dh; db:Pfam-A.hmm|PF01645.17 evalue:1.5e-154 score:513.8 best_domain_score:509.2 name:Glu_synthase; db:Pfam-A.hmm|PF04898.14 evalue:3.6e-74 score:249.0 best_domain_score:245.5 name:Glu_syn_central; db:Pfam-A.hmm|PF01493.19 evalue:8.6e-72 score:240.0 best_domain_score:239.3 name:GXGXG;
sprot_desc Glutamate synthase [NADPH] large chain;
sprot_id sp|Q05755|GLTB_AZOBR;
sprot_target db:uniprot_sprot|sp|Q05755|GLTB_AZOBR 2 978 evalue:0.0e+00 qcov:99.20 identity:68.70;
>Feature NODE_6140_length_12811_cov_61.2677
1 99 bac_5SrRNA
ID metaerg.pl|13504
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
662 354 CDS
ID metaerg.pl|13505
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__UBA4001;s__UBA4001 sp002384855;
genomedb_acc GCA_002384855.1;
genomedb_target db:genomedb|GCA_002384855.1|DGBP01000022.1_23 1 89 evalue:1.3e-22 qcov:87.30 identity:51.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
tm_num 3;
662 354 transmembrane_helix
ID metaerg.pl|13506
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
topology o396-464i483-542o570-638i;
1051 1401 CDS
ID metaerg.pl|13507
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Prauserella_B;s__Prauserella_B muralis;
genomedb_acc GCA_003202285.1;
genomedb_target db:genomedb|GCA_003202285.1|PXY19379.1 25 115 evalue:1.8e-31 qcov:78.40 identity:68.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
pfam_acc PF13937;
pfam_desc Domain of unknown function (DUF4212);
pfam_id DUF4212;
pfam_target db:Pfam-A.hmm|PF13937.6 evalue:4e-36 score:122.5 best_domain_score:122.2 name:DUF4212;
tigrfam_acc TIGR03647;
tigrfam_desc putative solute:sodium symporter small subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name Na_symport_sm;
tigrfam_sub1role Unknown substrate;
tigrfam_target db:TIGRFAMs.hmm|TIGR03647 evalue:1.9e-36 score:123.3 best_domain_score:123.0 name:TIGR03647;
tm_num 2;
1051 1401 transmembrane_helix
ID metaerg.pl|13508
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
topology i1162-1230o1267-1335i;
1398 3107 CDS
ID metaerg.pl|13509
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0015293; GO:0006814;
allko_ids K14393;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis marina;
genomedb_acc GCF_900111885.1;
genomedb_target db:genomedb|GCF_900111885.1|WP_091674551.1 1 565 evalue:1.1e-238 qcov:99.30 identity:76.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
pfam_acc PF00474;
pfam_desc Sodium:solute symporter family;
pfam_id SSF;
pfam_target db:Pfam-A.hmm|PF00474.17 evalue:1.3e-54 score:184.9 best_domain_score:118.3 name:SSF;
sprot_desc Uncharacterized symporter H16_A2524;
sprot_id sp|P31640|Y2524_CUPNH;
sprot_target db:uniprot_sprot|sp|P31640|Y2524_CUPNH 10 542 evalue:3.1e-75 qcov:93.70 identity:32.60;
tigrfam_acc TIGR03648;
tigrfam_desc probable sodium:solute symporter, VC_2705 subfamily;
tigrfam_name Na_symport_lg;
tigrfam_target db:TIGRFAMs.hmm|TIGR03648 evalue:1.4e-217 score:722.6 best_domain_score:722.4 name:TIGR03648;
tm_num 12;
1398 3107 transmembrane_helix
ID metaerg.pl|13510
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
topology o1407-1475i1536-1604o1617-1685i1740-1799o1842-1910i1944-2012o2109-2177i2214-2282o2511-2579i2640-2696o2724-2792i2811-2879o;
4911 3373 CDS
ID metaerg.pl|13511
allec_ids 6.2.1.-;
allgo_ids GO:0003824; GO:0005777; GO:0016874; GO:0006631;
allko_ids K00143; K03367; K01776; K05939; K01913; K01586; K01779; K02364; K00992; K01912; K01909; K01904; K01895; K01784; K00666; K01652; K01897;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__Bin134;g__Bin134;s__Bin134 sp002239105;
genomedb_acc GCA_002239105.1;
genomedb_target db:genomedb|GCA_002239105.1|MPNQ01000072.1_2 1 510 evalue:5.1e-208 qcov:99.60 identity:69.70;
kegg_pathway_id 00300; 00960; 00640; 00650; 00903; 00620; 00632; 00940; 00720; 00520; 00360; 00071; 00660; 00061; 00471; 00052; 00252; 00251; 00473; 00930; 01053; 00770; 00290; 00281; 00564; 00010; 00310;
kegg_pathway_name Lysine biosynthesis; Alkaloid biosynthesis II; Propanoate metabolism; Butanoate metabolism; Limonene and pinene degradation; Pyruvate metabolism; Benzoate degradation via CoA ligation; Phenylpropanoid biosynthesis; Reductive carboxylate cycle (CO2 fixation); Nucleotide sugars metabolism; Phenylalanine metabolism; Fatty acid metabolism; C5-Branched dibasic acid metabolism; Fatty acid biosynthesis; D-Glutamine and D-glutamate metabolism; Galactose metabolism; Alanine and aspartate metabolism; Glutamate metabolism; D-Alanine metabolism; Caprolactam degradation; Biosynthesis of siderophore group nonribosomal peptides; Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine biosynthesis; Geraniol degradation; Glycerophospholipid metabolism; Glycolysis / Gluconeogenesis; Lysine degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
metacyc_pathway_id PWY-6318; P601-PWY; PWY-5958; PWY-6457; CARNMET-PWY; PWY-6432; PWY-6443;
metacyc_pathway_name L-phenylalanine degradation IV (mammalian, via side chain);; (+)-camphor degradation;; acridone alkaloid biosynthesis;; cinnamoyl-CoA biosynthesis;; L-carnitine degradation I;; curcuminoid biosynthesis;; benzoate biosynthesis I (CoA-dependent, β-oxidative);;
metacyc_pathway_type PHENYLALANINE-DEG;; Camphor-Degradation;; ALKALOIDS-SYN;; AROMATIC-COMPOUNDS-BIOSYN; CINNAMATE-SYN;; CARN-DEG;; POLYKETIDE-SYN; Super-Pathways;; Benzoate-Biosynthesis; Super-Pathways;;
pfam_acc PF00501; PF13193;
pfam_desc AMP-binding enzyme; AMP-binding enzyme C-terminal domain;
pfam_id AMP-binding; AMP-binding_C;
pfam_target db:Pfam-A.hmm|PF00501.28 evalue:1.3e-83 score:280.2 best_domain_score:279.9 name:AMP-binding; db:Pfam-A.hmm|PF13193.6 evalue:8.7e-25 score:86.8 best_domain_score:85.3 name:AMP-binding_C;
sprot_desc Probable acyl-activating enzyme 1, peroxisomal;
sprot_id sp|F4HUK6|AAE1_ARATH;
sprot_target db:uniprot_sprot|sp|F4HUK6|AAE1_ARATH 39 498 evalue:5.4e-79 qcov:89.80 identity:36.40;
5558 4935 CDS
ID metaerg.pl|13512
allko_ids K02342;
casgene_acc cd06127_DEDDh_CAS-I;
casgene_name DEDDh;
casgene_target db:casgenes.hmm|cd06127_DEDDh_CAS-I evalue:4.9e-35 score:120.2 best_domain_score:120.0 name:DEDDh;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666816.1 20 207 evalue:4.8e-64 qcov:90.80 identity:71.80;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
pfam_acc PF00929;
pfam_desc Exonuclease;
pfam_id RNase_T;
pfam_target db:Pfam-A.hmm|PF00929.24 evalue:3.8e-17 score:62.6 best_domain_score:62.4 name:RNase_T;
7420 5555 CDS
ID metaerg.pl|13513
allgo_ids GO:0008773;
allko_ids K00088;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666817.1 19 621 evalue:2.2e-205 qcov:97.10 identity:63.30;
kegg_pathway_id 00983; 00230;
kegg_pathway_name Drug metabolism - other enzymes; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
pfam_acc PF00571; PF00027; PF03445; PF10335;
pfam_desc CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294; Putative nucleotidyltransferase substrate binding domain;
pfam_id CBS; cNMP_binding; DUF294; DUF294_C;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:4.5e-10 score:39.1 best_domain_score:26.6 name:CBS; db:Pfam-A.hmm|PF00027.29 evalue:2.8e-08 score:33.0 best_domain_score:31.3 name:cNMP_binding; db:Pfam-A.hmm|PF03445.13 evalue:8.9e-40 score:134.9 best_domain_score:134.1 name:DUF294; db:Pfam-A.hmm|PF10335.9 evalue:3.5e-37 score:126.6 best_domain_score:125.8 name:DUF294_C;
7521 7865 CDS
ID metaerg.pl|13514
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669896.1 5 108 evalue:8.6e-23 qcov:91.20 identity:57.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
tm_num 2;
7521 7865 transmembrane_helix
ID metaerg.pl|13515
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
topology i7617-7685o7728-7796i;
7862 9526 CDS
ID metaerg.pl|13516
allgo_ids GO:0016020; GO:0022857; GO:0055085; GO:0016021; GO:0005886; GO:0015123; GO:0043879; GO:0015293; GO:0006847; GO:0006814;
allko_ids K14393;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669898.1 5 554 evalue:3.6e-207 qcov:99.30 identity:71.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
pfam_acc PF00474;
pfam_desc Sodium:solute symporter family;
pfam_id SSF;
pfam_target db:Pfam-A.hmm|PF00474.17 evalue:3.5e-52 score:176.9 best_domain_score:176.3 name:SSF;
sprot_desc Uncharacterized symporter YwcA;
sprot_id sp|P39599|YWCA_BACSU;
sprot_target db:uniprot_sprot|sp|P39599|YWCA_BACSU 6 477 evalue:1.0e-46 qcov:85.20 identity:33.50;
tm_num 13;
7862 9526 transmembrane_helix
ID metaerg.pl|13517
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
topology o7871-7939i8000-8068o8081-8149i8210-8278o8321-8389i8426-8485o8612-8680i8738-8806o8924-8992i9053-9121o9164-9232i9251-9319o9347-9415i;
9526 10800 CDS
ID metaerg.pl|13518
allec_ids 2.7.13.3;
allgo_ids GO:0005515; GO:0016021; GO:0005886; GO:0005524; GO:0000155; GO:0071555;
allko_ids K07642; K08082; K02484; K08282; K07704; K03407; K07777; K07682; K07654; K07673; K07646; K07641; K08884; K07683; K07778; K07718; K02478; K06379; K04757; K02486; K07675; K07674; K02668; K01768; K07636; K07653; K02480;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052668293.1 2 423 evalue:2.5e-139 qcov:99.50 identity:63.30;
kegg_pathway_id 00230; 02020; 03090;
kegg_pathway_name Purine metabolism; Two-component system - General; Type II secretion system;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
pfam_acc PF01590; PF02518; PF06580;
pfam_desc GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Histidine kinase;
pfam_id GAF; HATPase_c; His_kinase;
pfam_target db:Pfam-A.hmm|PF01590.26 evalue:5.2e-06 score:26.4 best_domain_score:24.9 name:GAF; db:Pfam-A.hmm|PF02518.26 evalue:9.9e-10 score:38.2 best_domain_score:37.2 name:HATPase_c; db:Pfam-A.hmm|PF06580.13 evalue:1.4e-26 score:91.9 best_domain_score:91.2 name:His_kinase;
sp YES;
sprot_desc Sensor protein LytS;
sprot_id sp|P94513|LYTS_BACSU;
sprot_target db:uniprot_sprot|sp|P94513|LYTS_BACSU 83 424 evalue:1.0e-43 qcov:80.70 identity:32.90;
tm_num 2;
9526 9603 signal_peptide
ID metaerg.pl|13519
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
9526 10800 transmembrane_helix
ID metaerg.pl|13520
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
topology i9544-9603o9613-9681i;
10829 11629 CDS
ID metaerg.pl|13521
allgo_ids GO:0003677; GO:0005737; GO:0000156; GO:0000160;
allko_ids K07768; K11354; K07778; K07718; K07648; K07679; K03407; K07682; K07654; K07673; K01120; K07639; K07646; K07641; K08282; K07708; K07677; K11231; K07642; K11711; K11640; K00760; K02484; K07636; K07653; K02480; K02482; K07678; K10715; K11527; K10916; K08479; K03388; K02668; K07710; K07716; K02489; K11357; K04757; K02486; K13761; K12767; K07717; K07675; K07647; K07676; K10681; K06379; K07644; K07705;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669899.1 1 266 evalue:8.1e-80 qcov:100.00 identity:62.70;
kegg_pathway_id 02020; 04011; 00983; 03090; 00230; 05111; 00790;
kegg_pathway_name Two-component system - General; MAPK signaling pathway - yeast; Drug metabolism - other enzymes; Type II secretion system; Purine metabolism; Vibrio cholerae pathogenic cycle; Folate biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
pfam_acc PF04397; PF00072;
pfam_desc LytTr DNA-binding domain; Response regulator receiver domain;
pfam_id LytTR; Response_reg;
pfam_target db:Pfam-A.hmm|PF04397.15 evalue:3.7e-17 score:61.6 best_domain_score:60.7 name:LytTR; db:Pfam-A.hmm|PF00072.24 evalue:3.4e-25 score:87.6 best_domain_score:87.1 name:Response_reg;
sprot_desc Sensory transduction protein LytT;
sprot_id sp|Q81JL3|LYTT_BACAN;
sprot_target db:uniprot_sprot|sp|Q81JL3|LYTT_BACAN 4 266 evalue:2.4e-22 qcov:98.90 identity:29.20;
11815 12732 CDS
ID metaerg.pl|13522
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667408.1 6 300 evalue:1.5e-58 qcov:96.70 identity:52.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 44.773; 85.9727; 0.419398; 91.9313; 223.096;
>Feature NODE_6152_length_12794_cov_21.0411
470 3 CDS
ID metaerg.pl|13523
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 556.009; 377.672; 31.9725; 58.0281; 88.3366;
sp YES;
3 59 lipoprotein_signal_peptide
ID metaerg.pl|13524
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 556.009; 377.672; 31.9725; 58.0281; 88.3366;
1650 529 CDS
ID metaerg.pl|13525
allec_ids 2.7.1.170;
allgo_ids GO:0005524; GO:0006040; GO:0009254; GO:0016773; GO:0016301; GO:0097175; GO:0005975;
allko_ids K09001;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL37868.1 1 371 evalue:1.7e-120 qcov:99.50 identity:59.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 556.009; 377.672; 31.9725; 58.0281; 88.3366;
pfam_acc PF03702;
pfam_desc Anhydro-N-acetylmuramic acid kinase;
pfam_id AnmK;
pfam_target db:Pfam-A.hmm|PF03702.14 evalue:2.2e-121 score:404.6 best_domain_score:404.4 name:AnmK;
sprot_desc Anhydro-N-acetylmuramic acid kinase;
sprot_id sp|Q3BNC0|ANMK_XANC5;
sprot_target db:uniprot_sprot|sp|Q3BNC0|ANMK_XANC5 4 368 evalue:4.3e-94 qcov:97.90 identity:51.90;
3132 1654 CDS
ID metaerg.pl|13526
allec_ids 3.4.24.-;
allgo_ids GO:0016021; GO:0005886; GO:0046872; GO:0004222; GO:0001896; GO:0000920;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169811.1 34 485 evalue:1.7e-168 qcov:91.90 identity:67.50;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 556.009; 377.672; 31.9725; 58.0281; 88.3366;
pfam_acc PF04225; PF01551;
pfam_desc Opacity-associated protein A LysM-like domain; Peptidase family M23;
pfam_id OapA; Peptidase_M23;
pfam_target db:Pfam-A.hmm|PF04225.12 evalue:1.4e-07 score:30.7 best_domain_score:29.5 name:OapA; db:Pfam-A.hmm|PF01551.22 evalue:2.4e-32 score:110.2 best_domain_score:109.4 name:Peptidase_M23;
sprot_desc Uncharacterized metalloprotease HI_0409;
sprot_id sp|P44693|Y409_HAEIN;
sprot_target db:uniprot_sprot|sp|P44693|Y409_HAEIN 97 443 evalue:1.8e-39 qcov:70.50 identity:31.50;
3248 4438 CDS
ID metaerg.pl|13527
allec_ids 6.1.1.1;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0003723; GO:0004831; GO:0006437;
allko_ids K01866;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_082169327.1 1 395 evalue:6.8e-192 qcov:99.70 identity:84.10;
kegg_pathway_id 00970; 00400;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 556.009; 377.672; 31.9725; 58.0281; 88.3366;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00579;
pfam_desc tRNA synthetases class I (W and Y);
pfam_id tRNA-synt_1b;
pfam_target db:Pfam-A.hmm|PF00579.25 evalue:6.7e-71 score:238.2 best_domain_score:237.9 name:tRNA-synt_1b;
sprot_desc Tyrosine--tRNA ligase;
sprot_id sp|Q5QVP5|SYY_IDILO;
sprot_target db:uniprot_sprot|sp|Q5QVP5|SYY_IDILO 6 395 evalue:2.0e-145 qcov:98.50 identity:63.80;
tigrfam_acc TIGR00234;
tigrfam_desc tyrosine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name tyrS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00234 evalue:4.8e-115 score:384.0 best_domain_score:383.8 name:TIGR00234;
4863 5864 CDS
ID metaerg.pl|13528
allec_ids 2.1.3.9;
allgo_ids GO:0006520; GO:0016597; GO:0016743; GO:0005737; GO:0043857; GO:0004585; GO:0042450; GO:0019240;
allko_ids K00611; K01956; K09065; K00609; K11540; K01954; K13043; K01955; K11541;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049726921.1 1 331 evalue:1.0e-156 qcov:99.40 identity:81.60;
kegg_pathway_id 00240; 00251; 00252; 00220; 00330;
kegg_pathway_name Pyrimidine metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Arginine and proline metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 556.009; 377.672; 31.9725; 58.0281; 88.3366;
metacyc_pathway_id PWY-5154;
metacyc_pathway_name L-arginine biosynthesis III (via N-acetyl-L-citrulline);;
metacyc_pathway_type ARGININE-SYN;;
pfam_acc PF00185; PF02729;
pfam_desc Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain;
pfam_id OTCace; OTCace_N;
pfam_target db:Pfam-A.hmm|PF00185.24 evalue:7.7e-31 score:106.5 best_domain_score:106.0 name:OTCace; db:Pfam-A.hmm|PF02729.21 evalue:5.6e-34 score:116.5 best_domain_score:116.1 name:OTCace_N;
sprot_desc N-acetylornithine carbamoyltransferase;
sprot_id sp|Q8P8J2|AOTC_XANCP;
sprot_target db:uniprot_sprot|sp|Q8P8J2|AOTC_XANCP 1 333 evalue:4.8e-121 qcov:100.00 identity:63.00;
5871 7061 CDS
ID metaerg.pl|13529
allec_ids 6.3.4.5;
allgo_ids GO:0004055; GO:0005524; GO:0006526; GO:0005737; GO:0000053; GO:0000050;
allko_ids K01955; K01940;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724274.1 3 396 evalue:6.0e-196 qcov:99.50 identity:84.50;
kegg_pathway_id 00251; 00252; 00220; 00330; 00240;
kegg_pathway_name Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Arginine and proline metabolism; Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 556.009; 377.672; 31.9725; 58.0281; 88.3366;
metacyc_pathway_id ARG+POLYAMINE-SYN; PWY-5; ARGSYNBSUB-PWY; ARGININE-SYN4-PWY; PWY-5004; PWY-4984; PWY-4983; PWY-5154; ARGSYN-PWY;
metacyc_pathway_name superpathway of arginine and polyamine biosynthesis;; canavanine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis II;; superpathway of L-citrulline metabolism;; urea cycle;; nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type Polyamine-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; Citrulline-Biosynthesis; Super-Pathways;; NITROGEN-DEG;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF00764;
pfam_desc Arginosuccinate synthase;
pfam_id Arginosuc_synth;
pfam_target db:Pfam-A.hmm|PF00764.19 evalue:3.2e-72 score:243.2 best_domain_score:243.0 name:Arginosuc_synth;
sprot_desc Argininosuccinate synthase;
sprot_id sp|Q8P8J4|ASSY_XANCP;
sprot_target db:uniprot_sprot|sp|Q8P8J4|ASSY_XANCP 2 396 evalue:1.4e-122 qcov:99.70 identity:53.40;
7212 8294 CDS
ID metaerg.pl|13530
allec_ids 3.4.17.-;
allgo_ids GO:0016787; GO:0005576; GO:0046872; GO:0008233;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724275.1 3 356 evalue:2.5e-153 qcov:98.30 identity:74.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 556.009; 377.672; 31.9725; 58.0281; 88.3366;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:3.1e-17 score:61.7 best_domain_score:60.9 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:3.3e-24 score:85.0 best_domain_score:84.2 name:Peptidase_M20;
sprot_desc Probable carboxypeptidase MCYG_07204;
sprot_id sp|C5FXY7|P20D1_ARTOC;
sprot_target db:uniprot_sprot|sp|C5FXY7|P20D1_ARTOC 57 356 evalue:3.9e-07 qcov:83.30 identity:23.40;
8287 9609 CDS
ID metaerg.pl|13531
allec_ids 2.7.2.8;
allgo_ids GO:0005737; GO:0003991; GO:0005524; GO:0006526;
allko_ids K12659; K00620; K00145; K00619; K00618; K01438; K00930; K22478;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724276.1 1 434 evalue:4.7e-194 qcov:98.60 identity:78.30;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 556.009; 377.672; 31.9725; 58.0281; 88.3366;
metacyc_pathway_id GLUTORN-PWY; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; PWY-5154; ARGSYN-PWY;
metacyc_pathway_name L-ornithine biosynthesis I;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type L-Ornithine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF00696; PF04768;
pfam_desc Amino acid kinase family; NAT, N-acetyltransferase, of N-acetylglutamate synthase;
pfam_id AA_kinase; NAT;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:1.8e-23 score:82.6 best_domain_score:82.0 name:AA_kinase; db:Pfam-A.hmm|PF04768.13 evalue:4e-28 score:97.4 best_domain_score:96.7 name:NAT;
sprot_desc Acetylglutamate kinase;
sprot_id sp|Q9PEM7|ARGB_XYLFA;
sprot_target db:uniprot_sprot|sp|Q9PEM7|ARGB_XYLFA 15 424 evalue:7.3e-109 qcov:93.20 identity:47.60;
tigrfam_acc TIGR00761;
tigrfam_desc acetylglutamate kinase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argB;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00761 evalue:8.6e-53 score:178.4 best_domain_score:178.0 name:TIGR00761;
9602 10576 CDS
ID metaerg.pl|13532
allec_ids 1.2.1.38;
allgo_ids GO:0016620; GO:0051287; GO:0055114; GO:0005737; GO:0003942; GO:0006526;
allko_ids K12659; K00133; K00930; K00145; K00618;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724277.1 4 315 evalue:1.2e-125 qcov:96.30 identity:70.20;
kegg_pathway_id 00300; 00260; 00220;
kegg_pathway_name Lysine biosynthesis; Glycine, serine and threonine metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 556.009; 377.672; 31.9725; 58.0281; 88.3366;
metacyc_pathway_id ARGSYN-PWY; PWY-5154; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; GLUTORN-PWY;
metacyc_pathway_name L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis I;;
metacyc_pathway_type ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; L-Ornithine-Biosynthesis;;
pfam_acc PF01118; PF02774;
pfam_desc Semialdehyde dehydrogenase, NAD binding domain; Semialdehyde dehydrogenase, dimerisation domain;
pfam_id Semialdhyde_dh; Semialdhyde_dhC;
pfam_target db:Pfam-A.hmm|PF01118.24 evalue:6.6e-25 score:87.1 best_domain_score:86.3 name:Semialdhyde_dh; db:Pfam-A.hmm|PF02774.18 evalue:1.7e-09 score:37.2 best_domain_score:36.1 name:Semialdhyde_dhC;
sprot_desc N-acetyl-gamma-glutamyl-phosphate reductase;
sprot_id sp|B0RS54|ARGC_XANCB;
sprot_target db:uniprot_sprot|sp|B0RS54|ARGC_XANCB 6 315 evalue:1.5e-82 qcov:95.70 identity:50.30;
tigrfam_acc TIGR01850;
tigrfam_desc N-acetyl-gamma-glutamyl-phosphate reductase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argC;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01850 evalue:1e-79 score:267.4 best_domain_score:264.7 name:TIGR01850;
10744 12048 CDS
ID metaerg.pl|13533
allec_ids 4.3.2.1;
allgo_ids GO:0005737; GO:0004056; GO:0042450;
allko_ids K01679; K01744; K01756; K01857; K01755;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724278.1 1 430 evalue:8.0e-186 qcov:99.10 identity:77.90;
kegg_pathway_id 00220; 00252; 00330; 00362; 00910; 00020; 00230; 00720;
kegg_pathway_name Urea cycle and metabolism of amino groups; Alanine and aspartate metabolism; Arginine and proline metabolism; Benzoate degradation via hydroxylation; Nitrogen metabolism; Citrate cycle (TCA cycle); Purine metabolism; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 556.009; 377.672; 31.9725; 58.0281; 88.3366;
metacyc_pathway_id PWY-5004; PWY-4984; ARGININE-SYN4-PWY; ARGSYNBSUB-PWY; PWY-5; ARG+POLYAMINE-SYN; ARGSYN-PWY; PWY-5154; PWY-4983;
metacyc_pathway_name superpathway of L-citrulline metabolism;; urea cycle;; L-ornithine biosynthesis II;; L-arginine biosynthesis II (acetyl cycle);; canavanine biosynthesis;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; nitric oxide biosynthesis II (mammals);;
metacyc_pathway_type Citrulline-Biosynthesis; Super-Pathways;; NITROGEN-DEG;; L-Ornithine-Biosynthesis;; ARGININE-SYN;; NON-PROTEIN-AMINO-ACID-SYN;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;;
pfam_acc PF00206;
pfam_desc Lyase;
pfam_id Lyase_1;
pfam_target db:Pfam-A.hmm|PF00206.20 evalue:1.9e-49 score:167.9 best_domain_score:167.5 name:Lyase_1;
sprot_desc Argininosuccinate lyase;
sprot_id sp|B4SQ92|ARLY_STRM5;
sprot_target db:uniprot_sprot|sp|B4SQ92|ARLY_STRM5 1 431 evalue:4.3e-130 qcov:99.30 identity:54.40;
>Feature NODE_6587_length_12261_cov_6.09495
2 841 CDS
ID metaerg.pl|13534
allgo_ids GO:0006812; GO:0008324; GO:0055085; GO:0016021; GO:0005886; GO:0015379;
allko_ids K03498;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Haloferacaceae;g__Halopelagius;s__Halopelagius longus;
genomedb_acc GCF_900100875.1;
genomedb_target db:genomedb|GCF_900100875.1|WP_092538235.1 11 277 evalue:3.6e-62 qcov:95.70 identity:49.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
pfam_acc PF02386;
pfam_desc Cation transport protein;
pfam_id TrkH;
pfam_target db:Pfam-A.hmm|PF02386.16 evalue:1.6e-37 score:128.4 best_domain_score:102.7 name:TrkH;
sprot_desc Trk system potassium uptake protein TrkH;
sprot_id sp|E1V6C5|TRKH_HALED;
sprot_target db:uniprot_sprot|sp|E1V6C5|TRKH_HALED 22 268 evalue:1.8e-12 qcov:88.50 identity:27.50;
tm_num 3;
2 841 transmembrane_helix
ID metaerg.pl|13535
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
topology o86-154i191-259o575-643i;
906 2300 CDS
ID metaerg.pl|13536
allgo_ids GO:0006855; GO:0015297; GO:0016020; GO:0055085; GO:0016021; GO:0042910;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__QS-9-68-17;g__QS-9-68-17;s__QS-9-68-17 sp003023565;
genomedb_acc GCA_003023565.1;
genomedb_target db:genomedb|GCA_003023565.1|PSQ26680.1 1 464 evalue:1.6e-155 qcov:100.00 identity:64.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
pfam_acc PF01554; PF03023; PF14667;
pfam_desc MatE; Lipid II flippase MurJ; Polysaccharide biosynthesis C-terminal domain;
pfam_id MatE; MurJ; Polysacc_synt_C;
pfam_target db:Pfam-A.hmm|PF01554.18 evalue:1.1e-47 score:161.0 best_domain_score:109.2 name:MatE; db:Pfam-A.hmm|PF03023.14 evalue:1.9e-07 score:29.3 best_domain_score:29.3 name:MurJ; db:Pfam-A.hmm|PF14667.6 evalue:8.2e-10 score:38.1 best_domain_score:38.1 name:Polysacc_synt_C;
sprot_desc FAD transporter;
sprot_id sp|Q8EIX5|BFE_SHEON;
sprot_target db:uniprot_sprot|sp|Q8EIX5|BFE_SHEON 6 445 evalue:1.1e-27 qcov:94.80 identity:26.50;
tigrfam_acc TIGR00797;
tigrfam_desc MATE efflux family protein;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name matE;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00797 evalue:4.1e-64 score:216.1 best_domain_score:216.1 name:TIGR00797;
tm_num 10;
906 2300 transmembrane_helix
ID metaerg.pl|13537
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
topology i1065-1133o1191-1259i1278-1346o1404-1472i1491-1559o1692-1760i1866-1934o1992-2060i2097-2165o2178-2246i;
2337 4673 CDS
ID metaerg.pl|13538
allgo_ids GO:0003676; GO:0005524;
allko_ids K03725; K05592; K12854; K05591; K01509; K12598; K10896;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380267.1 1 778 evalue:0.0e+00 qcov:100.00 identity:92.00;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
pfam_acc PF00270; PF00271; PF14520; PF04851; PF02889;
pfam_desc DEAD/DEAH box helicase; Helicase conserved C-terminal domain; Helix-hairpin-helix domain; Type III restriction enzyme, res subunit; Sec63 Brl domain;
pfam_id DEAD; Helicase_C; HHH_5; ResIII; Sec63;
pfam_target db:Pfam-A.hmm|PF00270.29 evalue:7.1e-24 score:83.8 best_domain_score:82.3 name:DEAD; db:Pfam-A.hmm|PF00271.31 evalue:1.3e-09 score:37.6 best_domain_score:35.1 name:Helicase_C; db:Pfam-A.hmm|PF14520.6 evalue:4.7e-07 score:29.5 best_domain_score:28.0 name:HHH_5; db:Pfam-A.hmm|PF04851.15 evalue:1.4e-11 score:43.9 best_domain_score:43.1 name:ResIII; db:Pfam-A.hmm|PF02889.16 evalue:1.9e-16 score:59.3 best_domain_score:58.9 name:Sec63;
5306 4656 CDS
ID metaerg.pl|13539
allec_ids 3.1.3.-;
allgo_ids GO:0016787; GO:0000287; GO:0005975;
allko_ids K03731; K05344; K01838; K01194;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380269.1 1 216 evalue:2.1e-102 qcov:100.00 identity:88.00;
kegg_pathway_id 00500; 00010;
kegg_pathway_name Starch and sucrose metabolism; Glycolysis / Gluconeogenesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
metacyc_pathway_id PWY-5491; PWY-6456; NADPHOS-DEPHOS-PWY; PWY-5083; PWY-882;
metacyc_pathway_name diethylphosphate degradation;; serinol biosynthesis;; NAD phosphorylation and dephosphorylation;; NAD/NADH phosphorylation and dephosphorylation;; L-ascorbate biosynthesis I (L-galactose pathway);;
metacyc_pathway_type Phosphorus-Compounds;; Polyamine-Biosynthesis;; NAD-Metabolism;; NAD-Metabolism;; Ascorbate-Biosynthesis;;
pfam_acc PF12710; PF13419; PF00702; PF13242;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD; HAD_2; Hydrolase; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:3.8e-13 score:49.5 best_domain_score:49.2 name:HAD; db:Pfam-A.hmm|PF13419.6 evalue:7.9e-28 score:97.0 best_domain_score:96.7 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:7.6e-18 score:64.8 best_domain_score:61.7 name:Hydrolase; db:Pfam-A.hmm|PF13242.6 evalue:2e-10 score:39.9 best_domain_score:38.4 name:Hydrolase_like;
sprot_desc Phosphorylated carbohydrates phosphatase TM_1254;
sprot_id sp|Q9X0Y1|P1254_THEMA;
sprot_target db:uniprot_sprot|sp|Q9X0Y1|P1254_THEMA 1 176 evalue:2.4e-12 qcov:81.50 identity:31.80;
tigrfam_acc TIGR01509; TIGR01549;
tigrfam_desc HAD hydrolase, family IA, variant 3; HAD hydrolase, family IA, variant 1;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name HAD-SF-IA-v3; HAD-SF-IA-v1;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01509 evalue:1.3e-21 score:76.6 best_domain_score:66.2 name:TIGR01509; db:TIGRFAMs.hmm|TIGR01549 evalue:3.1e-09 score:36.6 best_domain_score:27.3 name:TIGR01549;
5397 6128 CDS
ID metaerg.pl|13540
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus jeotgali;
genomedb_acc GCF_000196895.1;
genomedb_target db:genomedb|GCF_000196895.1|WP_008419188.1 1 239 evalue:2.1e-119 qcov:98.40 identity:84.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
6159 7187 CDS
ID metaerg.pl|13541
allec_ids 4.6.1.16;
allgo_ids GO:0000213; GO:0006388; GO:0016829; GO:0003676;
allko_ids K01170;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380271.1 1 342 evalue:5.4e-169 qcov:100.00 identity:85.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
pfam_acc PF01974; PF02778;
pfam_desc tRNA intron endonuclease, catalytic C-terminal domain; tRNA intron endonuclease, N-terminal domain;
pfam_id tRNA_int_endo; tRNA_int_endo_N;
pfam_target db:Pfam-A.hmm|PF01974.17 evalue:6e-31 score:105.6 best_domain_score:84.0 name:tRNA_int_endo; db:Pfam-A.hmm|PF02778.14 evalue:2.9e-29 score:99.8 best_domain_score:50.0 name:tRNA_int_endo_N;
sprot_desc tRNA-splicing endonuclease;
sprot_id sp|O07118|ENDA_HALVD;
sprot_target db:uniprot_sprot|sp|O07118|ENDA_HALVD 5 342 evalue:3.1e-99 qcov:98.80 identity:56.40;
tigrfam_acc TIGR00324;
tigrfam_desc tRNA-intron lyase;
tigrfam_mainrole Transcription;
tigrfam_name endA;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR00324 evalue:1.1e-27 score:96.2 best_domain_score:69.3 name:TIGR00324;
7184 8794 CDS
ID metaerg.pl|13542
allec_ids 6.1.1.2;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004830; GO:0006436;
allko_ids K01867;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380273.1 1 535 evalue:5.3e-264 qcov:99.80 identity:84.70;
kegg_pathway_id 00380; 00970;
kegg_pathway_name Tryptophan metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00579;
pfam_desc tRNA synthetases class I (W and Y);
pfam_id tRNA-synt_1b;
pfam_target db:Pfam-A.hmm|PF00579.25 evalue:9.1e-40 score:136.0 best_domain_score:88.3 name:tRNA-synt_1b;
sprot_desc Tryptophan--tRNA ligase 1;
sprot_id sp|Q9HN83|SYW1_HALSA;
sprot_target db:uniprot_sprot|sp|Q9HN83|SYW1_HALSA 31 509 evalue:3.8e-200 qcov:89.40 identity:71.20;
tigrfam_acc TIGR00233;
tigrfam_desc tryptophan--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name trpS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00233 evalue:7.8e-71 score:238.2 best_domain_score:144.2 name:TIGR00233;
9866 8808 CDS
ID metaerg.pl|13543
allec_ids 1.3.5.2; 1.3.98.1;
allgo_ids GO:0005737; GO:0016627; GO:0055114; GO:0005886; GO:0004152; GO:0006207; GO:0044205;
allko_ids K00226; K00254;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus jeotgali;
genomedb_acc GCF_000196895.1;
genomedb_target db:genomedb|GCF_000196895.1|WP_008419194.1 1 352 evalue:2.9e-170 qcov:100.00 identity:85.80;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
metacyc_pathway_id PWY-5686; PRPP-PWY; PWY0-162;
metacyc_pathway_name UMP biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of pyrimidine ribonucleotides de novo biosynthesis;;
metacyc_pathway_type UMP-Biosynthesis;; Super-Pathways;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF01180;
pfam_desc Dihydroorotate dehydrogenase;
pfam_id DHO_dh;
pfam_target db:Pfam-A.hmm|PF01180.21 evalue:1e-90 score:303.1 best_domain_score:302.9 name:DHO_dh;
sprot_desc Dihydroorotate dehydrogenase (quinone);
sprot_id sp|B0R808|PYRD_HALS3;
sprot_target db:uniprot_sprot|sp|B0R808|PYRD_HALS3 3 351 evalue:1.3e-124 qcov:99.10 identity:63.90;
tigrfam_acc TIGR01036;
tigrfam_desc dihydroorotate dehydrogenase (fumarate);
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name pyrD_sub2;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01036 evalue:5.8e-121 score:402.7 best_domain_score:402.6 name:TIGR01036;
10092 9895 CDS
ID metaerg.pl|13544
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_008419196.1 1 65 evalue:2.3e-28 qcov:100.00 identity:100.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
10277 10585 CDS
ID metaerg.pl|13545
allgo_ids GO:0042262; GO:0003677;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380279.1 1 102 evalue:2.6e-47 qcov:100.00 identity:92.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
pfam_acc PF05854;
pfam_desc Non-histone chromosomal protein MC1;
pfam_id MC1;
pfam_target db:Pfam-A.hmm|PF05854.11 evalue:6.4e-47 score:157.0 best_domain_score:156.8 name:MC1;
sprot_desc Chromosomal protein MC1c;
sprot_id sp|P15251|HMC1C_METSH;
sprot_target db:uniprot_sprot|sp|P15251|HMC1C_METSH 7 102 evalue:1.1e-15 qcov:94.10 identity:46.90;
11385 12261 arc_16SrRNA
ID metaerg.pl|13546
Name arc_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KT216090.1.920 3 877 evalue:0.0 qcov:99 identity:97.143;
rRNA_taxon Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Haloferacaceae;uncultured;
11779 11570 CDS
ID metaerg.pl|13547
genomedb_OC d__Archaea;p__Micrarchaeota;c__Micrarchaeia;o__UBA10214;f__UBA10161;g__UBA10161;s__UBA10161 sp10161u;
genomedb_acc UBA10161;
genomedb_target db:genomedb|UBA10161|contig_12965_4 4 68 evalue:3.6e-08 qcov:94.20 identity:56.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 9.65164; ; ; 9.65164;
>Feature NODE_6689_length_12142_cov_6.84777
3 899 CDS
ID metaerg.pl|13548
allec_ids 2.7.2.8;
allgo_ids GO:0005737; GO:0003991; GO:0005524; GO:0042450;
allko_ids K12659; K12524; K00003; K00928; K00930; K12657; K00619; K00931; K01438; K00618; K00620; K00145;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441686.1 1 286 evalue:7.1e-125 qcov:96.00 identity:82.90;
kegg_pathway_id 00220; 00300; 00260;
kegg_pathway_name Urea cycle and metabolism of amino groups; Lysine biosynthesis; Glycine, serine and threonine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 11.0302; ; ; 11.0302; ;
metacyc_pathway_id ARGSYN-PWY; PWY-5154; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; GLUTORN-PWY;
metacyc_pathway_name L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; L-ornithine biosynthesis I;;
metacyc_pathway_type ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; L-Ornithine-Biosynthesis;;
pfam_acc PF00696;
pfam_desc Amino acid kinase family;
pfam_id AA_kinase;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:3.4e-45 score:153.7 best_domain_score:153.5 name:AA_kinase;
sprot_desc Acetylglutamate kinase;
sprot_id sp|Q0RFA8|ARGB_FRAAA;
sprot_target db:uniprot_sprot|sp|Q0RFA8|ARGB_FRAAA 2 287 evalue:1.2e-78 qcov:96.00 identity:56.40;
tigrfam_acc TIGR00761;
tigrfam_desc acetylglutamate kinase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argB;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00761 evalue:2.7e-72 score:242.2 best_domain_score:242.0 name:TIGR00761;
896 2110 CDS
ID metaerg.pl|13549
allec_ids 2.6.1.11;
allgo_ids GO:0008483; GO:0030170; GO:0005737; GO:0003992; GO:0006526;
allko_ids K05830; K00818; K00821;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441687.1 2 401 evalue:2.1e-172 qcov:99.00 identity:77.20;
kegg_pathway_id 00300; 00220;
kegg_pathway_name Lysine biosynthesis; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 11.0302; ; ; 11.0302; ;
metacyc_pathway_id GLUTORN-PWY; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; PWY-5154; ARGSYN-PWY;
metacyc_pathway_name L-ornithine biosynthesis I;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type L-Ornithine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:5.2e-99 score:330.9 best_domain_score:330.2 name:Aminotran_3;
sprot_desc Acetylornithine aminotransferase;
sprot_id sp|Q828A3|ARGD_STRAW;
sprot_target db:uniprot_sprot|sp|Q828A3|ARGD_STRAW 6 399 evalue:2.6e-92 qcov:97.50 identity:47.60;
tigrfam_acc TIGR00707;
tigrfam_desc transaminase, acetylornithine/succinylornithine family;
tigrfam_name argD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00707 evalue:3e-128 score:427.0 best_domain_score:426.8 name:TIGR00707;
2184 3134 CDS
ID metaerg.pl|13550
allec_ids 2.1.3.3;
allgo_ids GO:0006520; GO:0016597; GO:0016743; GO:0005737; GO:0004585; GO:0006526;
allko_ids K01954; K11540; K00609; K00611; K01956; K11541; K00610; K01955; K13043;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Euzebyales;f__Euzebyaceae;g__Euzebya;s__Euzebya sp003073135;
genomedb_acc GCF_003073135.1;
genomedb_target db:genomedb|GCF_003073135.1|WP_108665786.1 9 315 evalue:8.3e-100 qcov:97.20 identity:62.50;
kegg_pathway_id 00252; 00220; 00251; 00330; 00240;
kegg_pathway_name Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Glutamate metabolism; Arginine and proline metabolism; Pyrimidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 11.0302; ; ; 11.0302; ;
metacyc_pathway_id CITRULBIO-PWY; CITRULLINE-DEG-PWY; ARGSYN-PWY; ARGORNPROST-PWY; PWY-4981; ARGSYNBSUB-PWY; ARGININE-SYN4-PWY; PWY-5; ARG+POLYAMINE-SYN; ARGDEGRAD-PWY; PWY-4984; PWY-5004;
metacyc_pathway_name L-citrulline biosynthesis;; L-citrulline degradation;; L-arginine biosynthesis I (via L-ornithine);; L-arginine degradation (Stickland reaction);; L-proline biosynthesis II (from arginine);; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis II;; canavanine biosynthesis;; superpathway of arginine and polyamine biosynthesis;; L-arginine degradation V (arginine deiminase pathway);; urea cycle;; superpathway of L-citrulline metabolism;;
metacyc_pathway_type Citrulline-Biosynthesis;; MISCELLANEOUS-DEG;; ARGININE-SYN; Super-Pathways;; ARGININE-DEG; Super-Pathways;; PROLINE-SYN;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; NON-PROTEIN-AMINO-ACID-SYN;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-DEG; Super-Pathways;; NITROGEN-DEG;; Citrulline-Biosynthesis; Super-Pathways;;
pfam_acc PF00185; PF02729;
pfam_desc Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain;
pfam_id OTCace; OTCace_N;
pfam_target db:Pfam-A.hmm|PF00185.24 evalue:5.6e-55 score:184.9 best_domain_score:184.6 name:OTCace; db:Pfam-A.hmm|PF02729.21 evalue:8.4e-47 score:158.1 best_domain_score:157.3 name:OTCace_N;
sprot_desc Ornithine carbamoyltransferase;
sprot_id sp|A8LE44|OTC_FRASN;
sprot_target db:uniprot_sprot|sp|A8LE44|OTC_FRASN 9 315 evalue:3.7e-94 qcov:97.20 identity:60.30;
tigrfam_acc TIGR00658;
tigrfam_desc ornithine carbamoyltransferase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name orni_carb_tr;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00658 evalue:2e-117 score:390.9 best_domain_score:390.7 name:TIGR00658;
3152 3655 CDS
ID metaerg.pl|13551
allgo_ids GO:0003700; GO:0006355; GO:0006525; GO:0005737; GO:0034618; GO:0003677; GO:0006526; GO:0051259;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667396.1 4 144 evalue:8.2e-38 qcov:84.40 identity:63.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 11.0302; ; ; 11.0302; ;
pfam_acc PF01316; PF02863;
pfam_desc Arginine repressor, DNA binding domain; Arginine repressor, C-terminal domain;
pfam_id Arg_repressor; Arg_repressor_C;
pfam_target db:Pfam-A.hmm|PF01316.21 evalue:2.9e-19 score:67.8 best_domain_score:66.9 name:Arg_repressor; db:Pfam-A.hmm|PF02863.18 evalue:2.5e-18 score:64.9 best_domain_score:64.1 name:Arg_repressor_C;
sprot_desc Arginine repressor;
sprot_id sp|P0A4Y9|ARGR_MYCBO;
sprot_target db:uniprot_sprot|sp|P0A4Y9|ARGR_MYCBO 2 144 evalue:1.7e-21 qcov:85.60 identity:46.60;
3652 4872 CDS
ID metaerg.pl|13552
allec_ids 6.3.4.5;
allgo_ids GO:0004055; GO:0005524; GO:0006526; GO:0005737;
allko_ids K01955; K01940;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667397.1 1 404 evalue:4.7e-212 qcov:99.50 identity:87.40;
kegg_pathway_id 00240; 00330; 00252; 00220; 00251;
kegg_pathway_name Pyrimidine metabolism; Arginine and proline metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Glutamate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 11.0302; ; ; 11.0302; ;
metacyc_pathway_id ARGSYNBSUB-PWY; ARGININE-SYN4-PWY; PWY-5; ARG+POLYAMINE-SYN; PWY-4984; PWY-5004; ARGSYN-PWY; PWY-5154; PWY-4983;
metacyc_pathway_name L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis II;; canavanine biosynthesis;; superpathway of arginine and polyamine biosynthesis;; urea cycle;; superpathway of L-citrulline metabolism;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; nitric oxide biosynthesis II (mammals);;
metacyc_pathway_type ARGININE-SYN;; L-Ornithine-Biosynthesis;; NON-PROTEIN-AMINO-ACID-SYN;; Polyamine-Biosynthesis; Super-Pathways;; NITROGEN-DEG;; Citrulline-Biosynthesis; Super-Pathways;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;;
pfam_acc PF00764;
pfam_desc Arginosuccinate synthase;
pfam_id Arginosuc_synth;
pfam_target db:Pfam-A.hmm|PF00764.19 evalue:1.9e-167 score:556.7 best_domain_score:556.5 name:Arginosuc_synth;
sprot_desc Argininosuccinate synthase;
sprot_id sp|Q0RFB2|ASSY_FRAAA;
sprot_target db:uniprot_sprot|sp|Q0RFB2|ASSY_FRAAA 5 397 evalue:1.3e-149 qcov:96.80 identity:66.20;
tigrfam_acc TIGR00032;
tigrfam_desc argininosuccinate synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argG;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00032 evalue:7.4e-149 score:495.5 best_domain_score:495.3 name:TIGR00032;
4869 5621 CDS
ID metaerg.pl|13553
allko_ids K01759;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Nocardia;s__Nocardia veterana;
genomedb_acc GCF_000308855.1;
genomedb_target db:genomedb|GCF_000308855.1|WP_040718802.1 10 243 evalue:1.2e-16 qcov:93.60 identity:30.30;
kegg_pathway_id 04011; 00620;
kegg_pathway_name MAPK signaling pathway - yeast; Pyruvate metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 11.0302; ; ; 11.0302; ;
pfam_acc PF18029;
pfam_desc Glyoxalase-like domain;
pfam_id Glyoxalase_6;
pfam_target db:Pfam-A.hmm|PF18029.1 evalue:1.2e-26 score:92.8 best_domain_score:52.7 name:Glyoxalase_6;
5618 6343 CDS
ID metaerg.pl|13554
allko_ids K01759;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667398.1 12 240 evalue:3.7e-31 qcov:95.00 identity:36.80;
kegg_pathway_id 00620; 04011;
kegg_pathway_name Pyruvate metabolism; MAPK signaling pathway - yeast;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 11.0302; ; ; 11.0302; ;
pfam_acc PF18029;
pfam_desc Glyoxalase-like domain;
pfam_id Glyoxalase_6;
pfam_target db:Pfam-A.hmm|PF18029.1 evalue:3e-33 score:114.1 best_domain_score:63.2 name:Glyoxalase_6;
6340 7161 CDS
ID metaerg.pl|13555
allec_ids 2.3.1.-;
allgo_ids GO:0016747; GO:0016746;
allko_ids K01207;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora pacifica_B;
genomedb_acc GCF_000378845.1;
genomedb_target db:genomedb|GCF_000378845.1|WP_018222728.1 10 259 evalue:4.2e-39 qcov:91.60 identity:41.90;
kegg_pathway_id 01032; 00530;
kegg_pathway_name Glycan structures - degradation; Aminosugars metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 11.0302; ; ; 11.0302; ;
metacyc_pathway_id SOPHOROSYLOXYDOCOSANOATE-SYN-PWY; PWY-6310; PWY-5139; PWY-5080; PWY-6312; PWY-6418; PWY-6442; PWY-6397; PWY1-3; KDO-NAGLIPASYN-PWY; PWY-5184; BENZCOA-PWY; PWY-4801; PWY1A0-6325; PWY-6432; LPSSYN-PWY; PWY-6113; FASYN-INITIAL-PWY; PWYG-321; PWY-6413; PWY-5437; PWY-5981; PWY-5477; PWY-5393; PWY-6412; KDO-LIPASYN-PWY; PWY-6318; PWY-5307; PWY-5405; PWY-5972; PWY-5400; PWY-5965; PWY-5209; PWY-5140; PWY-5987; PWY-6411; PWY-5268; PWY0-881; PWY-6404; CENTBENZCOA-PWY; PWY-6316; PWY-5313; P3-PWY; PWY-6295; PWY-6515; ECASYN-PWY; PWY-5284; PWY-84; THREOCAT-PWY; PWY-6438;
metacyc_pathway_name sophorolipid biosynthesis;; aloesone biosynthesis II;; pelargonidin conjugates biosynthesis;; very long chain fatty acid biosynthesis I;; barbaloin biosynthesis;; 4-hydroxycoumarin and dicoumarol biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; polyhydroxybutanoate biosynthesis;; superpathway of (Kdo)2-lipid A biosynthesis;; toluene degradation VI (anaerobic);; anaerobic aromatic compound degradation (Thauera aromatica);; aloesone biosynthesis I;; actinorhodin biosynthesis;; curcuminoid biosynthesis;; superpathway of lipopolysaccharide biosynthesis;; superpathway of mycolate biosynthesis;; superpathway of fatty acid biosynthesis initiation (E. coli);; mycolate biosynthesis;; ginsenoside degradation III;; L-threonine degradation I;; CDP-diacylglycerol biosynthesis III;; gallotannin biosynthesis;; raspberry ketone biosynthesis;; ginsenoside degradation II;; (Kdo)2-lipid A biosynthesis I;; L-phenylalanine degradation IV (mammalian, via side chain);; gentiodelphin biosynthesis;; superpathway of betalain biosynthesis;; stearate biosynthesis I (animals and fungi);; amaranthin biosynthesis;; fatty acid biosynthesis initiation III;; methyl-coenzyme M oxidation to CO2;; cannabinoid biosynthesis;; sorgoleone biosynthesis;; ginsenoside degradation I;; salvianin biosynthesis;; superpathway of fatty acid biosynthesis I (E. coli);; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; benzoyl-CoA degradation II (anaerobic);; aromatic polyketides biosynthesis;; superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside);; gallate degradation III (anaerobic);; ; phloridzin biosynthesis;; enterobacterial common antigen biosynthesis;; shisonin biosynthesis;; resveratrol biosynthesis;; superpathway of L-threonine metabolism;; phenylphenalenone biosynthesis;;
metacyc_pathway_type Lipid-Biosynthesis;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis;; POLYKETIDE-SYN;; PHYTOALEXIN-SYN; POLYKETIDE-SYN;; N-CONTAINING-SECONDARY-CMPD-SYN;; Cell-Wall-Biosynthesis;; Storage-Compounds-Biosynthesis;; Lipid-Biosynthesis; Lipopolysaccharide-Biosynthesis; Super-Pathways;; Super-Pathways; TOLUENE-DEG;; AROMATIC-COMPOUNDS-DEGRADATION; Super-Pathways;; POLYKETIDE-SYN;; Antibiotic-Biosynthesis;; POLYKETIDE-SYN; Super-Pathways;; Lipid-Biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;; TERPENOID-DEG;; THREONINE-DEG;; CDP-diacylglycerol-Biosynthesis;; GALLOTANNINS;; POLYKETIDE-SYN;; Ginsenoside-Degradation;; Lipid-Biosynthesis;; PHENYLALANINE-DEG;; ANTHOCYANIN-SYN;; BETALAIN-ALKALOIDS; Super-Pathways;; Stearate-Biosynthesis;; BETALAIN-ALKALOIDS;; Fatty-acid-biosynthesis;; METHANOGENESIS;; TERPENOPHENOLICS-SYN;; QUINONE-SYN;; Ginsenoside-Degradation;; ANTHOCYANIN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; Benzoyl-CoA-Degradation;; POLYKETIDE-SYN;; ANTHOCYANIN-SYN; Super-Pathways;; GALLATE-DEG;; ; FLAVONOID-SYN;; Lipopolysaccharide-Biosynthesis; Super-Pathways;; ANTHOCYANIN-SYN;; STILBENE-PHYTOALEXINS; STILBENE-SYN;; Super-Pathways; THREONINE-DEG;; POLYKETIDE-SYN;;
pfam_acc PF00583; PF13508; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_7; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:8.6e-13 score:47.8 best_domain_score:45.7 name:Acetyltransf_1; db:Pfam-A.hmm|PF13508.7 evalue:1.1e-07 score:31.4 best_domain_score:30.6 name:Acetyltransf_7; db:Pfam-A.hmm|PF08445.10 evalue:7.6e-10 score:37.9 best_domain_score:34.8 name:FR47;
sprot_desc Uncharacterized N-acetyltransferase YobR;
sprot_id sp|O34376|YOBR_BACSU;
sprot_target db:uniprot_sprot|sp|O34376|YOBR_BACSU 15 257 evalue:2.0e-08 qcov:89.00 identity:25.90;
7151 8563 CDS
ID metaerg.pl|13556
allec_ids 4.3.2.1;
allgo_ids GO:0005737; GO:0004056; GO:0042450;
allko_ids K01756; K01857; K01679; K01744; K01755;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667400.1 5 467 evalue:5.6e-217 qcov:98.50 identity:84.20;
kegg_pathway_id 00362; 00910; 00252; 00220; 00330; 00720; 00230; 00020;
kegg_pathway_name Benzoate degradation via hydroxylation; Nitrogen metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Arginine and proline metabolism; Reductive carboxylate cycle (CO2 fixation); Purine metabolism; Citrate cycle (TCA cycle);
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 11.0302; ; ; 11.0302; ;
metacyc_pathway_id PWY-5154; PWY-4983; ARGSYN-PWY; PWY-4984; PWY-5004; ARGSYNBSUB-PWY; ARGININE-SYN4-PWY; ARG+POLYAMINE-SYN; PWY-5;
metacyc_pathway_name L-arginine biosynthesis III (via N-acetyl-L-citrulline);; nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis I (via L-ornithine);; urea cycle;; superpathway of L-citrulline metabolism;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis II;; superpathway of arginine and polyamine biosynthesis;; canavanine biosynthesis;;
metacyc_pathway_type ARGININE-SYN;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN; Super-Pathways;; NITROGEN-DEG;; Citrulline-Biosynthesis; Super-Pathways;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;;
pfam_acc PF14698; PF00206;
pfam_desc Argininosuccinate lyase C-terminal; Lyase;
pfam_id ASL_C2; Lyase_1;
pfam_target db:Pfam-A.hmm|PF14698.6 evalue:7.6e-21 score:73.9 best_domain_score:72.5 name:ASL_C2; db:Pfam-A.hmm|PF00206.20 evalue:2.2e-64 score:217.1 best_domain_score:216.7 name:Lyase_1;
sprot_desc Argininosuccinate lyase;
sprot_id sp|Q47N85|ARLY_THEFY;
sprot_target db:uniprot_sprot|sp|Q47N85|ARLY_THEFY 10 462 evalue:9.2e-134 qcov:96.40 identity:57.00;
tigrfam_acc TIGR00838;
tigrfam_desc argininosuccinate lyase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argH;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00838 evalue:2e-162 score:540.5 best_domain_score:540.3 name:TIGR00838;
8718 10550 CDS
ID metaerg.pl|13557
allec_ids 2.7.7.7; 3.1.11.1;
allgo_ids GO:0003677; GO:0003887; GO:0008852; GO:0046872; GO:0006281; GO:0006260;
allko_ids K04486; K02347;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667402.1 1 604 evalue:4.2e-233 qcov:99.00 identity:69.90;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 11.0302; ; ; 11.0302; ;
pfam_acc PF14791; PF00633; PF14520; PF14716; PF02811;
pfam_desc DNA polymerase beta thumb ; Helix-hairpin-helix motif; Helix-hairpin-helix domain; Helix-hairpin-helix domain; PHP domain;
pfam_id DNA_pol_B_thumb; HHH; HHH_5; HHH_8; PHP;
pfam_target db:Pfam-A.hmm|PF14791.6 evalue:3.2e-21 score:74.5 best_domain_score:73.4 name:DNA_pol_B_thumb; db:Pfam-A.hmm|PF00633.23 evalue:3.9e-08 score:32.0 best_domain_score:14.1 name:HHH; db:Pfam-A.hmm|PF14520.6 evalue:1.9e-11 score:43.6 best_domain_score:30.6 name:HHH_5; db:Pfam-A.hmm|PF14716.6 evalue:1.6e-21 score:75.6 best_domain_score:59.3 name:HHH_8; db:Pfam-A.hmm|PF02811.19 evalue:4.7e-07 score:29.5 best_domain_score:27.6 name:PHP;
sprot_desc DNA polymerase/3'-5' exonuclease PolX;
sprot_id sp|P94544|POLX_BACSU;
sprot_target db:uniprot_sprot|sp|P94544|POLX_BACSU 8 605 evalue:3.4e-88 qcov:98.00 identity:32.50;
10587 11249 CDS
ID metaerg.pl|13558
allec_ids 3.2.2.-;
allgo_ids GO:0003677; GO:0003905; GO:0006284;
allko_ids K03652;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669755.1 31 218 evalue:2.7e-49 qcov:85.50 identity:60.80;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 11.0302; ; ; 11.0302; ;
metacyc_pathway_id PWY-2681; PWY-5381;
metacyc_pathway_name trans-zeatin biosynthesis;; pyridine nucleotide cycling (plants);;
metacyc_pathway_type CYTOKININ-BIOSYNTHESIS;; NAD-Metabolism;;
pfam_acc PF02245;
pfam_desc Methylpurine-DNA glycosylase (MPG);
pfam_id Pur_DNA_glyco;
pfam_target db:Pfam-A.hmm|PF02245.16 evalue:3.1e-56 score:188.8 best_domain_score:188.5 name:Pur_DNA_glyco;
sprot_desc Putative 3-methyladenine DNA glycosylase;
sprot_id sp|Q5YYA5|3MGH_NOCFA;
sprot_target db:uniprot_sprot|sp|Q5YYA5|3MGH_NOCFA 17 218 evalue:1.9e-36 qcov:91.80 identity:50.20;
tigrfam_acc TIGR00567;
tigrfam_desc DNA-3-methyladenine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name 3mg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00567 evalue:2.2e-51 score:173.3 best_domain_score:173.1 name:TIGR00567;
>Feature NODE_7024_length_11821_cov_15.8983
133 246 bac_5SrRNA
ID metaerg.pl|13559
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CVKH01000045.4542.7021 24 103 evalue:7.97e-25 qcov:70 identity:92.500;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;
1061 318 CDS
ID metaerg.pl|13560
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas alkaliantarctica;
genomedb_acc GCF_000712975.1;
genomedb_target db:genomedb|GCF_000712975.1|WP_030074308.1 2 247 evalue:6.3e-111 qcov:99.60 identity:83.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF00106; PF13561;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase;
pfam_id adh_short; adh_short_C2;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:5.7e-16 score:57.8 best_domain_score:57.3 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:2.8e-09 score:36.1 best_domain_score:35.7 name:adh_short_C2;
1587 1138 CDS
ID metaerg.pl|13561
allgo_ids GO:0005515; GO:0044780;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI65468.1 1 149 evalue:1.2e-59 qcov:100.00 identity:85.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF05130;
pfam_desc FlgN protein;
pfam_id FlgN;
pfam_target db:Pfam-A.hmm|PF05130.12 evalue:4.3e-25 score:88.2 best_domain_score:88.0 name:FlgN;
1865 1599 CDS
ID metaerg.pl|13562
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI65469.1 1 88 evalue:9.3e-33 qcov:100.00 identity:89.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF04316;
pfam_desc Anti-sigma-28 factor, FlgM;
pfam_id FlgM;
pfam_target db:Pfam-A.hmm|PF04316.13 evalue:1.1e-07 score:31.3 best_domain_score:30.9 name:FlgM;
tigrfam_acc TIGR03824;
tigrfam_desc flagellar biosynthesis anti-sigma factor FlgM;
tigrfam_name FlgM_jcvi;
tigrfam_target db:TIGRFAMs.hmm|TIGR03824 evalue:3.9e-15 score:55.6 best_domain_score:55.1 name:TIGR03824;
2671 1952 CDS
ID metaerg.pl|13563
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001507855;
genomedb_acc GCA_001507855.1;
genomedb_target db:genomedb|GCA_001507855.1|KUJ89116.1 1 239 evalue:1.7e-100 qcov:100.00 identity:78.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF13144; PF17656; PF08666;
pfam_desc Chaperone for flagella basal body P-ring formation; FlgA N-terminal domain; SAF domain;
pfam_id ChapFlgA; ChapFlgA_N; SAF;
pfam_target db:Pfam-A.hmm|PF13144.6 evalue:3.1e-29 score:100.7 best_domain_score:100.2 name:ChapFlgA; db:Pfam-A.hmm|PF17656.1 evalue:4.8e-12 score:45.1 best_domain_score:43.9 name:ChapFlgA_N; db:Pfam-A.hmm|PF08666.12 evalue:9.7e-10 score:38.2 best_domain_score:36.3 name:SAF;
sp YES;
tigrfam_acc TIGR03170;
tigrfam_desc flagella basal body P-ring formation protein FlgA;
tigrfam_mainrole Cellular processes;
tigrfam_name flgA_cterm;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR03170 evalue:5.6e-36 score:122.7 best_domain_score:122.2 name:TIGR03170;
1952 2056 signal_peptide
ID metaerg.pl|13564
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
2858 3292 CDS
ID metaerg.pl|13565
allgo_ids GO:0071973; GO:0030694; GO:0009424; GO:0071978;
allko_ids K02387;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas ventosae_B;
genomedb_acc GCF_002257525.1;
genomedb_target db:genomedb|GCF_002257525.1|WP_035582516.1 1 144 evalue:3.4e-64 qcov:100.00 identity:86.80;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF00460;
pfam_desc Flagella basal body rod protein;
pfam_id Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF00460.20 evalue:3.1e-09 score:35.8 best_domain_score:34.7 name:Flg_bb_rod;
sprot_desc Flagellar basal body rod protein FlgB;
sprot_id sp|P16437|FLGB_SALTY;
sprot_target db:uniprot_sprot|sp|P16437|FLGB_SALTY 1 142 evalue:3.5e-36 qcov:98.60 identity:56.60;
tigrfam_acc TIGR01396;
tigrfam_desc flagellar basal-body rod protein FlgB;
tigrfam_mainrole Cellular processes;
tigrfam_name FlgB;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR01396 evalue:2.5e-37 score:127.2 best_domain_score:127.0 name:TIGR01396;
3325 3735 CDS
ID metaerg.pl|13566
allgo_ids GO:0071973; GO:0030694;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas arcis;
genomedb_acc GCF_900103865.1;
genomedb_target db:genomedb|GCF_900103865.1|WP_089703843.1 1 136 evalue:1.9e-64 qcov:100.00 identity:95.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF06429; PF00460;
pfam_desc Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein;
pfam_id Flg_bbr_C; Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF06429.13 evalue:3.9e-13 score:48.6 best_domain_score:48.6 name:Flg_bbr_C; db:Pfam-A.hmm|PF00460.20 evalue:7e-10 score:37.9 best_domain_score:36.9 name:Flg_bb_rod;
sprot_desc Flagellar basal-body rod protein FlgC;
sprot_id sp|Q56894|FLGC_YEREN;
sprot_target db:uniprot_sprot|sp|Q56894|FLGC_YEREN 1 135 evalue:5.1e-37 qcov:99.30 identity:58.50;
tigrfam_acc TIGR01395;
tigrfam_desc flagellar basal-body rod protein FlgC;
tigrfam_mainrole Cellular processes;
tigrfam_name FlgC;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR01395 evalue:2.8e-52 score:175.8 best_domain_score:175.6 name:TIGR01395;
3739 4428 CDS
ID metaerg.pl|13567
allgo_ids GO:0005829; GO:0044781;
allko_ids K02389;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002696125;
genomedb_acc GCA_002696125.1;
genomedb_target db:genomedb|GCA_002696125.1|MAO61861.1 1 229 evalue:1.0e-94 qcov:100.00 identity:80.40;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF03963; PF13860; PF13861;
pfam_desc Flagellar hook capping protein - N-terminal region; FlgD Ig-like domain; FlgD Tudor-like domain;
pfam_id FlgD; FlgD_ig; FLgD_tudor;
pfam_target db:Pfam-A.hmm|PF03963.14 evalue:3.3e-22 score:77.8 best_domain_score:77.0 name:FlgD; db:Pfam-A.hmm|PF13860.6 evalue:2.3e-22 score:77.9 best_domain_score:76.9 name:FlgD_ig; db:Pfam-A.hmm|PF13861.6 evalue:7.1e-15 score:54.2 best_domain_score:53.3 name:FLgD_tudor;
sprot_desc Basal-body rod modification protein FlgD;
sprot_id sp|P75936|FLGD_ECOLI;
sprot_target db:uniprot_sprot|sp|P75936|FLGD_ECOLI 9 229 evalue:1.3e-45 qcov:96.50 identity:47.50;
4464 5702 CDS
ID metaerg.pl|13568
allgo_ids GO:0071973; GO:0009425;
allko_ids K02390;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000037.1_8 1 412 evalue:2.6e-194 qcov:100.00 identity:85.40;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF07559; PF06429; PF00460;
pfam_desc Flagellar basal body protein FlaE; Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein;
pfam_id FlaE; Flg_bbr_C; Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF07559.14 evalue:1.2e-22 score:80.0 best_domain_score:78.6 name:FlaE; db:Pfam-A.hmm|PF06429.13 evalue:1.2e-21 score:75.8 best_domain_score:75.8 name:Flg_bbr_C; db:Pfam-A.hmm|PF00460.20 evalue:1.9e-09 score:36.5 best_domain_score:36.5 name:Flg_bb_rod;
sprot_desc Flagellar hook protein FlgE;
sprot_id sp|P0A1J2|FLGE_SALTI;
sprot_target db:uniprot_sprot|sp|P0A1J2|FLGE_SALTI 1 412 evalue:2.3e-88 qcov:100.00 identity:45.20;
tigrfam_acc TIGR03506;
tigrfam_desc flagellar hook-basal body protein;
tigrfam_name FlgEFG_subfam;
tigrfam_target db:TIGRFAMs.hmm|TIGR03506 evalue:1.6e-99 score:333.1 best_domain_score:332.9 name:TIGR03506;
5734 6492 CDS
ID metaerg.pl|13569
allgo_ids GO:0071973; GO:0009425;
allko_ids K02391;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas titanicae;
genomedb_acc GCF_000336575.1;
genomedb_target db:genomedb|GCF_000336575.1|WP_009288419.1 1 252 evalue:3.6e-122 qcov:100.00 identity:90.50;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF06429; PF00460;
pfam_desc Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein;
pfam_id Flg_bbr_C; Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF06429.13 evalue:6.2e-22 score:76.8 best_domain_score:75.9 name:Flg_bbr_C; db:Pfam-A.hmm|PF00460.20 evalue:3.5e-07 score:29.3 best_domain_score:28.1 name:Flg_bb_rod;
sprot_desc Flagellar basal-body rod protein FlgF;
sprot_id sp|P75938|FLGF_ECOLI;
sprot_target db:uniprot_sprot|sp|P75938|FLGF_ECOLI 1 250 evalue:5.9e-63 qcov:99.20 identity:51.00;
tigrfam_acc TIGR03506;
tigrfam_desc flagellar hook-basal body protein;
tigrfam_name FlgEFG_subfam;
tigrfam_target db:TIGRFAMs.hmm|TIGR03506 evalue:8.8e-51 score:172.8 best_domain_score:109.5 name:TIGR03506;
6543 7325 CDS
ID metaerg.pl|13570
allgo_ids GO:0071973; GO:0009426;
allko_ids K02392;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp001882345;
genomedb_acc GCF_001882345.1;
genomedb_target db:genomedb|GCF_001882345.1|WP_071694924.1 1 260 evalue:1.3e-138 qcov:100.00 identity:96.90;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF06429; PF00460;
pfam_desc Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein;
pfam_id Flg_bbr_C; Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF06429.13 evalue:2.2e-26 score:91.0 best_domain_score:91.0 name:Flg_bbr_C; db:Pfam-A.hmm|PF00460.20 evalue:1.1e-14 score:53.2 best_domain_score:51.4 name:Flg_bb_rod;
sprot_desc Flagellar basal-body rod protein FlgG;
sprot_id sp|P0A1J4|FLGG_SALTI;
sprot_target db:uniprot_sprot|sp|P0A1J4|FLGG_SALTI 1 260 evalue:1.8e-102 qcov:100.00 identity:70.00;
tigrfam_acc TIGR02488; TIGR03506;
tigrfam_desc flagellar basal-body rod protein FlgG; flagellar hook-basal body protein;
tigrfam_mainrole Cellular processes;
tigrfam_name flgG_G_neg; FlgEFG_subfam;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR02488 evalue:2e-116 score:387.2 best_domain_score:387.0 name:TIGR02488; db:TIGRFAMs.hmm|TIGR03506 evalue:1.4e-77 score:260.9 best_domain_score:166.0 name:TIGR03506;
7348 8037 CDS
ID metaerg.pl|13571
allgo_ids GO:0003774; GO:0009427; GO:0071973; GO:0009279;
allko_ids K02393;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sulfidaeris;
genomedb_acc GCA_003298795.1;
genomedb_target db:genomedb|GCA_003298795.1|RBI65477.1 1 229 evalue:2.4e-112 qcov:100.00 identity:90.40;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF02107;
pfam_desc Flagellar L-ring protein;
pfam_id FlgH;
pfam_target db:Pfam-A.hmm|PF02107.16 evalue:6.2e-62 score:207.4 best_domain_score:207.1 name:FlgH;
sp YES;
sprot_desc Flagellar L-ring protein;
sprot_id sp|B7LT58|FLGH_ESCF3;
sprot_target db:uniprot_sprot|sp|B7LT58|FLGH_ESCF3 13 228 evalue:2.9e-64 qcov:94.30 identity:61.00;
tm_num 1;
7348 7422 lipoprotein_signal_peptide
ID metaerg.pl|13572
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
7348 8037 transmembrane_helix
ID metaerg.pl|13573
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
topology i7384-7452o;
8056 9228 CDS
ID metaerg.pl|13574
allgo_ids GO:0005198; GO:0009428; GO:0030288; GO:0071973;
allko_ids K02394;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas boliviensis;
genomedb_acc GCF_000236035.1;
genomedb_target db:genomedb|GCF_000236035.1|WP_007112102.1 15 390 evalue:3.4e-188 qcov:96.40 identity:93.10;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF02119;
pfam_desc Flagellar P-ring protein;
pfam_id FlgI;
pfam_target db:Pfam-A.hmm|PF02119.16 evalue:6e-136 score:452.1 best_domain_score:451.9 name:FlgI;
sp YES;
sprot_desc Flagellar P-ring protein;
sprot_id sp|Q1QW35|FLGI_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1QW35|FLGI_CHRSD 24 390 evalue:6.0e-123 qcov:94.10 identity:64.90;
tm_num 1;
8056 8190 signal_peptide
ID metaerg.pl|13575
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
8056 9228 transmembrane_helix
ID metaerg.pl|13576
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
topology i8131-8190o;
9228 10259 CDS
ID metaerg.pl|13577
allec_ids 3.2.1.-;
allgo_ids GO:0004040; GO:0042597; GO:0016798; GO:0044780; GO:0071973; GO:0071555; GO:0008152;
allko_ids K01448; K02395;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002364315;
genomedb_acc GCA_002364315.1;
genomedb_target db:genomedb|GCA_002364315.1|DEXX01000037.1_13 1 343 evalue:2.1e-149 qcov:100.00 identity:81.20;
kegg_pathway_id 00550; 02040;
kegg_pathway_name Peptidoglycan biosynthesis; Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
metacyc_pathway_id PWY-5821; PWY-5825; PWY-5976; SUCROSEUTIL2-PWY; PWY-862;
metacyc_pathway_name dalcochinin biosynthesis;; dalpatein and dalnigrein biosynthesis;; dhurrin degradation;; sucrose degradation VII (sucrose 3-dehydrogenase);; fructan degradation;;
metacyc_pathway_type ISOFLAVONOID-SYN;; ISOFLAVONOID-SYN;; CYANOGENIC-GLUCOSIDE-DEG;; SUCROSE-DEG;; Glycan-Pathways; POLYSACCHARIDES-DEG;;
pfam_acc PF01832; PF10135;
pfam_desc Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; Rod binding protein;
pfam_id Glucosaminidase; Rod-binding;
pfam_target db:Pfam-A.hmm|PF01832.20 evalue:8.7e-22 score:76.7 best_domain_score:75.8 name:Glucosaminidase; db:Pfam-A.hmm|PF10135.9 evalue:2.7e-17 score:62.3 best_domain_score:62.3 name:Rod-binding;
sprot_desc Peptidoglycan hydrolase FlgJ;
sprot_id sp|P15931|FLGJ_SALTY;
sprot_target db:uniprot_sprot|sp|P15931|FLGJ_SALTY 11 329 evalue:2.3e-49 qcov:93.00 identity:40.00;
tigrfam_acc TIGR02541;
tigrfam_desc flagellar rod assembly protein/muramidase FlgJ;
tigrfam_name flagell_FlgJ;
tigrfam_target db:TIGRFAMs.hmm|TIGR02541 evalue:2.6e-98 score:328.7 best_domain_score:328.3 name:TIGR02541;
10333 11820 CDS
ID metaerg.pl|13578
allgo_ids GO:0071973; GO:0009424; GO:0005576; GO:0005198; GO:0044780;
allko_ids K02396;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp002696125;
genomedb_acc GCA_002696125.1;
genomedb_target db:genomedb|GCA_002696125.1|MAO61854.1 1 496 evalue:6.0e-230 qcov:100.00 identity:81.70;
kegg_pathway_id 02040;
kegg_pathway_name Flagellar assembly;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 23.8052; ; ; 23.8052;
pfam_acc PF00460;
pfam_desc Flagella basal body rod protein;
pfam_id Flg_bb_rod;
pfam_target db:Pfam-A.hmm|PF00460.20 evalue:4.3e-08 score:32.2 best_domain_score:30.1 name:Flg_bb_rod;
sprot_desc Flagellar hook-associated protein 1;
sprot_id sp|P0A1J6|FLGK_SALTI;
sprot_target db:uniprot_sprot|sp|P0A1J6|FLGK_SALTI 2 489 evalue:2.0e-91 qcov:98.40 identity:40.40;
tigrfam_acc TIGR02492;
tigrfam_desc flagellar hook-associated protein FlgK;
tigrfam_mainrole Cellular processes;
tigrfam_name flgK_ends;
tigrfam_sub1role Chemotaxis and motility;
tigrfam_target db:TIGRFAMs.hmm|TIGR02492 evalue:7.9e-74 score:248.7 best_domain_score:243.7 name:TIGR02492;
>Feature NODE_7123_length_11723_cov_10.4794
1 2425 bac_23SrRNA
ID metaerg.pl|13579
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FLMP01000812.1368.4251 1 2425 evalue:0.0 qcov:100 identity:93.042;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Opitutales;
2568 2681 bac_5SrRNA
ID metaerg.pl|13580
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
4752 2830 CDS
ID metaerg.pl|13581
allgo_ids GO:0004222; GO:0006508;
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Puniceicoccaceae;g__BACL24;s__BACL24 sp002729725;
genomedb_acc GCA_002729725.1;
genomedb_target db:genomedb|GCA_002729725.1|MBT64334.1 1 637 evalue:1.8e-202 qcov:99.50 identity:58.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
pfam_acc PF01435;
pfam_desc Peptidase family M48;
pfam_id Peptidase_M48;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:4.2e-27 score:94.4 best_domain_score:93.2 name:Peptidase_M48;
tm_num 5;
4752 2830 transmembrane_helix
ID metaerg.pl|13582
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
topology i2887-2955o3013-3081i3385-3453o3517-3585i3745-3813o;
5380 4775 CDS
ID metaerg.pl|13583
allgo_ids GO:0016021; GO:0005886;
allko_ids K03744;
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Puniceicoccaceae;g__BACL24;s__BACL24 sp002729725;
genomedb_acc GCA_002729725.1;
genomedb_target db:genomedb|GCA_002729725.1|MBT64333.1 5 199 evalue:4.8e-77 qcov:97.00 identity:79.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
pfam_acc PF04011;
pfam_desc LemA family;
pfam_id LemA;
pfam_target db:Pfam-A.hmm|PF04011.12 evalue:3.4e-57 score:191.7 best_domain_score:191.4 name:LemA;
sprot_desc hypothetical protein;
sprot_id sp|A8AVK0|LEMA_STRGC;
sprot_target db:uniprot_sprot|sp|A8AVK0|LEMA_STRGC 10 201 evalue:5.1e-33 qcov:95.50 identity:44.80;
tm_num 1;
5380 4775 transmembrane_helix
ID metaerg.pl|13584
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
topology o4784-4852i;
5541 6173 CDS
ID metaerg.pl|13585
allgo_ids GO:0003700; GO:0006352; GO:0006355; GO:0000345; GO:0032993; GO:0001216; GO:0016987; GO:0000976; GO:0042121; GO:0071236; GO:0036460; GO:1902201; GO:0009405; GO:1900189; GO:1900036; GO:1902884; GO:1900233; GO:0045893; GO:0032885;
allko_ids K03088;
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Puniceicoccaceae;g__BACL24;s__BACL24 sp002729725;
genomedb_acc GCA_002729725.1;
genomedb_target db:genomedb|GCA_002729725.1|MBT62690.1 1 209 evalue:4.7e-99 qcov:99.50 identity:89.50;
kegg_pathway_id 03020;
kegg_pathway_name RNA polymerase;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
pfam_acc PF07638; PF04542; PF04545; PF08281;
pfam_desc ECF sigma factor; Sigma-70 region 2 ; Sigma-70, region 4; Sigma-70, region 4;
pfam_id Sigma70_ECF; Sigma70_r2; Sigma70_r4; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF07638.11 evalue:8.1e-09 score:34.9 best_domain_score:34.2 name:Sigma70_ECF; db:Pfam-A.hmm|PF04542.14 evalue:5.8e-19 score:66.9 best_domain_score:66.0 name:Sigma70_r2; db:Pfam-A.hmm|PF04545.16 evalue:1.8e-09 score:36.2 best_domain_score:35.2 name:Sigma70_r4; db:Pfam-A.hmm|PF08281.12 evalue:1.9e-14 score:52.3 best_domain_score:51.4 name:Sigma70_r4_2;
sprot_desc RNA polymerase sigma-H factor;
sprot_id sp|Q06198|RPSH_PSEAE;
sprot_target db:uniprot_sprot|sp|Q06198|RPSH_PSEAE 22 206 evalue:1.1e-27 qcov:88.10 identity:38.80;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:4.5e-35 score:119.9 best_domain_score:119.7 name:TIGR02937;
6243 6782 CDS
ID metaerg.pl|13586
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Puniceicoccaceae;g__BACL24;s__BACL24 sp002480015;
genomedb_acc GCA_002480015.1;
genomedb_target db:genomedb|GCA_002480015.1|DLQD01000153.1_38 1 179 evalue:1.1e-35 qcov:100.00 identity:48.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
tm_num 1;
6243 6782 transmembrane_helix
ID metaerg.pl|13587
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
topology i6417-6485o;
6881 7837 CDS
ID metaerg.pl|13588
allec_ids 3.4.21.107;
allgo_ids GO:0005515; GO:0071575; GO:0042597; GO:0042802; GO:0008233; GO:0004252; GO:0006508; GO:0051603;
allko_ids K04772;
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Puniceicoccaceae;g__BACL24;s__BACL24 sp002480015;
genomedb_acc GCA_002480015.1;
genomedb_target db:genomedb|GCA_002480015.1|DLQD01000153.1_37 1 316 evalue:5.6e-136 qcov:99.40 identity:75.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
pfam_acc PF00595; PF13180; PF17820; PF13365;
pfam_desc PDZ domain; PDZ domain; PDZ domain; Trypsin-like peptidase domain;
pfam_id PDZ; PDZ_2; PDZ_6; Trypsin_2;
pfam_target db:Pfam-A.hmm|PF00595.24 evalue:1.6e-07 score:30.8 best_domain_score:29.8 name:PDZ; db:Pfam-A.hmm|PF13180.6 evalue:8.8e-11 score:41.2 best_domain_score:40.4 name:PDZ_2; db:Pfam-A.hmm|PF17820.1 evalue:3.9e-08 score:32.3 best_domain_score:31.3 name:PDZ_6; db:Pfam-A.hmm|PF13365.6 evalue:4.5e-10 score:39.9 best_domain_score:39.2 name:Trypsin_2;
sprot_desc Periplasmic pH-dependent serine endoprotease DegQ;
sprot_id sp|P39099|DEGQ_ECOLI;
sprot_target db:uniprot_sprot|sp|P39099|DEGQ_ECOLI 31 260 evalue:7.3e-18 qcov:72.30 identity:28.80;
9293 8049 CDS
ID metaerg.pl|13589
allgo_ids GO:0003677; GO:0004803; GO:0006313;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylocystis;s__Methylocystis sp003152255;
genomedb_acc GCA_003152255.1;
genomedb_target db:genomedb|GCA_003152255.1|PLZT01000679.1_1 1 413 evalue:5.6e-112 qcov:99.80 identity:42.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
pfam_acc PF01609;
pfam_desc domain;
pfam_id DDE_Tnp_1;
pfam_target db:Pfam-A.hmm|PF01609.21 evalue:3.3e-16 score:58.8 best_domain_score:56.5 name:DDE_Tnp_1;
10937 9480 CDS
ID metaerg.pl|13590
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Puniceicoccaceae;g__BACL24;s__BACL24 sp002729725;
genomedb_acc GCA_002729725.1;
genomedb_target db:genomedb|GCA_002729725.1|MBT62693.1 1 485 evalue:3.6e-211 qcov:100.00 identity:75.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
sp YES;
9480 9539 signal_peptide
ID metaerg.pl|13591
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
11722 10952 CDS
ID metaerg.pl|13592
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Puniceicoccaceae;g__BACL24;s__BACL24 sp002862945;
genomedb_acc GCA_002862945.1;
genomedb_target db:genomedb|GCA_002862945.1|PKCJ01000084.1_3 53 253 evalue:2.2e-66 qcov:78.50 identity:65.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
tm_num 1;
11722 10952 transmembrane_helix
ID metaerg.pl|13593
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.506869; 15.5781; 1.07397; 1.07111; 12.9261;
topology o11093-11161i;
>Feature NODE_7423_length_11433_cov_7.07954
331 1 bac_16SrRNA
ID metaerg.pl|13594
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.4865; 0.0259683; ; 10.4605;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|HQ190526.1.1507 6 327 evalue:6.60e-147 qcov:97 identity:95.963;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Marinobacteraceae;
1913 705 CDS
ID metaerg.pl|13595
allec_ids 2.1.2.-;
allgo_ids GO:0005524; GO:0050662; GO:0000287; GO:0043815; GO:0004644; GO:0006189;
allko_ids K08289; K01589;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E sp001320525;
genomedb_acc GCF_001320525.1;
genomedb_target db:genomedb|GCF_001320525.1|WP_054903244.1 11 399 evalue:1.0e-163 qcov:96.80 identity:74.80;
kegg_pathway_id 00230; 00670;
kegg_pathway_name Purine metabolism; One carbon pool by folate;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.4865; 0.0259683; ; 10.4605;
metacyc_pathway_id PWY-6122; DENOVOPURINE2-PWY; PWY-6277; PRPP-PWY;
metacyc_pathway_name 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type AIR-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF02222; PF02786; PF07478; PF01370;
pfam_desc ATP-grasp domain; Carbamoyl-phosphate synthase L chain, ATP binding domain; D-ala D-ala ligase C-terminus; NAD dependent epimerase/dehydratase family;
pfam_id ATP-grasp; CPSase_L_D2; Dala_Dala_lig_C; Epimerase;
pfam_target db:Pfam-A.hmm|PF02222.22 evalue:1.8e-57 score:192.9 best_domain_score:192.2 name:ATP-grasp; db:Pfam-A.hmm|PF02786.17 evalue:5.1e-06 score:25.4 best_domain_score:24.4 name:CPSase_L_D2; db:Pfam-A.hmm|PF07478.13 evalue:5.7e-06 score:25.2 best_domain_score:21.8 name:Dala_Dala_lig_C; db:Pfam-A.hmm|PF01370.21 evalue:5.9e-05 score:21.9 best_domain_score:21.2 name:Epimerase;
sprot_desc Formate-dependent phosphoribosylglycinamide formyltransferase;
sprot_id sp|B1JDF0|PURT_PSEPW;
sprot_target db:uniprot_sprot|sp|B1JDF0|PURT_PSEPW 11 399 evalue:1.7e-165 qcov:96.80 identity:74.60;
tigrfam_acc TIGR01142;
tigrfam_desc phosphoribosylglycinamide formyltransferase 2;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name purT;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01142 evalue:1.2e-185 score:616.0 best_domain_score:615.8 name:TIGR01142;
2119 1910 CDS
ID metaerg.pl|13596
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Tamilnaduibacter;s__Tamilnaduibacter sp002717955;
genomedb_acc GCA_002717955.1;
genomedb_target db:genomedb|GCA_002717955.1|MBH84151.1 8 65 evalue:1.1e-12 qcov:84.10 identity:56.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.4865; 0.0259683; ; 10.4605;
pfam_acc PF06945;
pfam_desc Protein of unknown function (DUF1289);
pfam_id DUF1289;
pfam_target db:Pfam-A.hmm|PF06945.13 evalue:3.5e-20 score:70.8 best_domain_score:70.5 name:DUF1289;
2655 2116 CDS
ID metaerg.pl|13597
allko_ids K00674; K04042; K02536; K00677; K00640;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Marinobacter;s__Marinobacter mobilis;
genomedb_acc GCF_900106945.1;
genomedb_target db:genomedb|GCF_900106945.1|WP_091817629.1 1 166 evalue:4.2e-72 qcov:92.70 identity:78.30;
kegg_pathway_id 00920; 00540; 00530; 00300; 00272;
kegg_pathway_name Sulfur metabolism; Lipopolysaccharide biosynthesis; Aminosugars metabolism; Lysine biosynthesis; Cysteine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.4865; 0.0259683; ; 10.4605;
pfam_acc PF00132;
pfam_desc Bacterial transferase hexapeptide (six repeats);
pfam_id Hexapep;
pfam_target db:Pfam-A.hmm|PF00132.24 evalue:1.5e-11 score:42.7 best_domain_score:33.4 name:Hexapep;
sprot_desc hypothetical protein;
sprot_id sp|P40882|Y3753_PSEAE;
sprot_target db:uniprot_sprot|sp|P40882|Y3753_PSEAE 1 170 evalue:1.4e-42 qcov:95.00 identity:67.60;
3289 2690 CDS
ID metaerg.pl|13598
allec_ids 3.6.1.-;
allgo_ids GO:0016787; GO:0016818; GO:0000287; GO:0030145; GO:0009132;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Marinobacter;s__Marinobacter sp900215155;
genomedb_acc GCF_900215155.1;
genomedb_target db:genomedb|GCF_900215155.1|WP_096276726.1 1 190 evalue:9.7e-62 qcov:95.50 identity:62.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.4865; 0.0259683; ; 10.4605;
metacyc_pathway_id PWY-6502; PWY-6147; PWY-6383; FOLSYN-PWY; ALL-CHORISMATE-PWY; PWY-6404; PWY-5354;
metacyc_pathway_name oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ;
metacyc_pathway_type Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;; Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; ;
pfam_acc PF00293;
pfam_desc NUDIX domain;
pfam_id NUDIX;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:2.9e-11 score:42.7 best_domain_score:42.4 name:NUDIX;
sprot_desc Uncharacterized Nudix hydrolase NudL;
sprot_id sp|Q7N3M0|NUDL_PHOLL;
sprot_target db:uniprot_sprot|sp|Q7N3M0|NUDL_PHOLL 24 173 evalue:3.4e-21 qcov:75.40 identity:34.00;
3486 4031 CDS
ID metaerg.pl|13599
allec_ids 3.6.1.-;
allgo_ids GO:0016787; GO:0009507; GO:0047631; GO:0047884; GO:0046872; GO:0042726; GO:0009416;
allko_ids K03574; K01515; K08310; K18453;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Halomonas_D;s__Halomonas_D sp002286965;
genomedb_acc GCF_002286965.1;
genomedb_target db:genomedb|GCF_002286965.1|WP_095617830.1 1 179 evalue:2.0e-69 qcov:98.90 identity:68.00;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.4865; 0.0259683; ; 10.4605;
metacyc_pathway_id PWY-6502; PWY-6147; PWY-6383; FOLSYN-PWY; ALL-CHORISMATE-PWY; PWY-6404; PWY-5354;
metacyc_pathway_name oxidized GTP and dGTP detoxification;; 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I;; mono-trans, poly-cis decaprenyl phosphate biosynthesis;; superpathway of tetrahydrofolate biosynthesis and salvage;; superpathway of chorismate metabolism;; superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis;; ;
metacyc_pathway_type Detoxification; Metabolic-Clusters;; 6-HM-Dihydropterin-PP-Biosynthesis;; Polyprenyl-Biosynthesis;; Folate-Biosynthesis; Super-Pathways;; Super-Pathways;; Cell-Wall-Biosynthesis; Super-Pathways;; ;
pfam_acc PF00293; PF14803;
pfam_desc NUDIX domain; Nudix N-terminal;
pfam_id NUDIX; Nudix_N_2;
pfam_target db:Pfam-A.hmm|PF00293.28 evalue:3.7e-12 score:45.7 best_domain_score:45.4 name:NUDIX; db:Pfam-A.hmm|PF14803.6 evalue:1.5e-17 score:62.5 best_domain_score:61.7 name:Nudix_N_2;
sprot_desc Nudix hydrolase 23, chloroplastic;
sprot_id sp|P93740|NUD23_ARATH;
sprot_target db:uniprot_sprot|sp|P93740|NUD23_ARATH 1 164 evalue:2.1e-33 qcov:90.60 identity:40.90;
4359 4048 CDS
ID metaerg.pl|13600
allgo_ids GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Marinobacter;s__Marinobacter daqiaonensis;
genomedb_acc GCF_900115285.1;
genomedb_target db:genomedb|GCF_900115285.1|WP_092014953.1 1 103 evalue:9.2e-40 qcov:100.00 identity:73.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.4865; 0.0259683; ; 10.4605;
sprot_desc GTP cyclohydrolase 1 type 2 homolog;
sprot_id sp|O69481|GCH1L_MYCLE;
sprot_target db:uniprot_sprot|sp|O69481|GCH1L_MYCLE 3 100 evalue:4.3e-20 qcov:95.10 identity:46.90;
8748 4846 CDS
ID metaerg.pl|13601
allec_ids 6.3.5.3;
allgo_ids GO:0005737; GO:0005524; GO:0046872; GO:0004642; GO:0006189; GO:0006541;
allko_ids K01952;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Mangrovitalea;s__Mangrovitalea sediminis;
genomedb_acc GCF_002514725.1;
genomedb_target db:genomedb|GCF_002514725.1|WP_097460511.1 1 1300 evalue:0.0e+00 qcov:100.00 identity:74.10;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.4865; 0.0259683; ; 10.4605;
metacyc_pathway_id PWY-6122; DENOVOPURINE2-PWY; PWY-6121; PWY-841; PWY-6277; PRPP-PWY;
metacyc_pathway_name 5-aminoimidazole ribonucleotide biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;; 5-aminoimidazole ribonucleotide biosynthesis I;; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of 5-aminoimidazole ribonucleotide biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type AIR-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; AIR-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF02769; PF18072; PF18076; PF13507;
pfam_desc AIR synthase related protein, C-terminal domain; Formylglycinamide ribonucleotide amidotransferase linker domain; Formylglycinamide ribonucleotide amidotransferase N-terminal; CobB/CobQ-like glutamine amidotransferase domain;
pfam_id AIRS_C; FGAR-AT_linker; FGAR-AT_N; GATase_5;
pfam_target db:Pfam-A.hmm|PF02769.22 evalue:6.8e-43 score:145.7 best_domain_score:96.5 name:AIRS_C; db:Pfam-A.hmm|PF18072.1 evalue:9.9e-24 score:82.9 best_domain_score:81.7 name:FGAR-AT_linker; db:Pfam-A.hmm|PF18076.1 evalue:1e-41 score:140.7 best_domain_score:139.9 name:FGAR-AT_N; db:Pfam-A.hmm|PF13507.6 evalue:7e-106 score:352.3 best_domain_score:351.8 name:GATase_5;
sprot_desc Phosphoribosylformylglycinamidine synthase;
sprot_id sp|Q2SK05|PUR4_HAHCH;
sprot_target db:uniprot_sprot|sp|Q2SK05|PUR4_HAHCH 1 1300 evalue:0.0e+00 qcov:100.00 identity:67.40;
tigrfam_acc TIGR01735;
tigrfam_desc phosphoribosylformylglycinamidine synthase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name FGAM_synt;
tigrfam_sub1role Purine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01735 evalue:0 score:1981.5 best_domain_score:1981.3 name:TIGR01735;
8989 10572 CDS
ID metaerg.pl|13602
allec_ids 4.2.2.n1;
allgo_ids GO:0009279; GO:0016837; GO:0008933; GO:0016998; GO:0071555; GO:0000270;
allko_ids K02030; K18691;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Halomonas_D;s__Halomonas_D utahensis;
genomedb_acc GCF_900162675.1;
genomedb_target db:genomedb|GCF_900162675.1|WP_077529060.1 42 511 evalue:6.8e-163 qcov:89.20 identity:59.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.4865; 0.0259683; ; 10.4605;
pfam_acc PF00497; PF01464;
pfam_desc Bacterial extracellular solute-binding proteins, family 3; Transglycosylase SLT domain;
pfam_id SBP_bac_3; SLT;
pfam_target db:Pfam-A.hmm|PF00497.20 evalue:1.6e-25 score:89.1 best_domain_score:88.7 name:SBP_bac_3; db:Pfam-A.hmm|PF01464.20 evalue:3.3e-19 score:67.9 best_domain_score:67.2 name:SLT;
sp YES;
sprot_desc Membrane-bound lytic murein transglycosylase F;
sprot_id sp|Q2SK06|MLTF_HAHCH;
sprot_target db:uniprot_sprot|sp|Q2SK06|MLTF_HAHCH 41 515 evalue:2.7e-134 qcov:90.10 identity:49.10;
8989 9144 lipoprotein_signal_peptide
ID metaerg.pl|13603
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.4865; 0.0259683; ; 10.4605;
11047 10580 CDS
ID metaerg.pl|13604
allgo_ids GO:0006282; GO:0005737;
allko_ids K03565;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Oleiphilaceae;g__Tamilnaduibacter;s__Tamilnaduibacter bohaiensis;
genomedb_acc GCF_003258515.1;
genomedb_target db:genomedb|GCF_003258515.1|WP_111497653.1 12 155 evalue:3.6e-32 qcov:92.90 identity:49.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.4865; 0.0259683; ; 10.4605;
pfam_acc PF02631;
pfam_desc RecX family;
pfam_id RecX;
pfam_target db:Pfam-A.hmm|PF02631.16 evalue:1e-25 score:89.8 best_domain_score:89.8 name:RecX;
sprot_desc Regulatory protein RecX;
sprot_id sp|A1WXK6|RECX_HALHL;
sprot_target db:uniprot_sprot|sp|A1WXK6|RECX_HALHL 5 155 evalue:7.4e-24 qcov:97.40 identity:43.40;
11199 11432 CDS
ID metaerg.pl|13605
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.4865; 0.0259683; ; 10.4605;
>Feature NODE_7764_length_11107_cov_9.00317
701 3 CDS
ID metaerg.pl|13606
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia jeotgali;
genomedb_acc GCF_001483765.1;
genomedb_target db:genomedb|GCF_001483765.1|WP_058887951.1 30 232 evalue:9.9e-50 qcov:87.10 identity:53.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 16.6216; 0.0402482; 4.95692; 11.4368; 0.187643;
pfam_acc PF08282;
pfam_desc haloacid dehalogenase-like hydrolase;
pfam_id Hydrolase_3;
pfam_target db:Pfam-A.hmm|PF08282.12 evalue:2.1e-17 score:63.0 best_domain_score:62.9 name:Hydrolase_3;
2558 1416 CDS
ID metaerg.pl|13607
allec_ids 7.6.2.10;
allgo_ids GO:0005524; GO:0016887; GO:0005886; GO:0015430; GO:0008643; GO:0015794; GO:0001407;
allko_ids K10239; K02068; K11072; K02045; K02062; K10191; K10199; K01996; K06861; K02071; K02017; K02032; K11084; K02052; K02006; K02004; K02003; K01997; K05847; K02010; K02000; K10230; K02018; K02023; K10000; K11080; K01990; K10243; K10195; K11076; K05816; K06857; K10235; K01998; K10111; K10112; K01995; K02065; K02049;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia alba;
genomedb_acc GCF_000421745.1;
genomedb_target db:genomedb|GCF_000421745.1|WP_022872621.1 1 380 evalue:2.7e-177 qcov:100.00 identity:82.50;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 16.6216; 0.0402482; 4.95692; 11.4368; 0.187643;
pfam_acc PF00005; PF17850; PF17912; PF08402;
pfam_desc ABC transporter; CysA C-terminal regulatory domain; MalK OB fold domain; TOBE domain;
pfam_id ABC_tran; CysA_C_terminal; OB_MalK; TOBE_2;
pfam_target db:Pfam-A.hmm|PF00005.27 evalue:4e-31 score:107.6 best_domain_score:106.8 name:ABC_tran; db:Pfam-A.hmm|PF17850.1 evalue:4.1e-09 score:36.1 best_domain_score:31.3 name:CysA_C_terminal; db:Pfam-A.hmm|PF17912.1 evalue:3e-08 score:33.6 best_domain_score:31.3 name:OB_MalK; db:Pfam-A.hmm|PF08402.10 evalue:5.3e-06 score:25.7 best_domain_score:23.2 name:TOBE_2;
sprot_desc sn-glycerol-3-phosphate import ATP-binding protein UgpC;
sprot_id sp|Q5LX21|UGPC_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LX21|UGPC_RUEPO 1 356 evalue:9.8e-94 qcov:93.70 identity:51.80;
3360 2803 CDS
ID metaerg.pl|13608
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia massiliensis;
genomedb_acc GCF_000455245.1;
genomedb_target db:genomedb|GCF_000455245.1|WP_049897687.1 1 183 evalue:8.4e-52 qcov:98.90 identity:59.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 16.6216; 0.0402482; 4.95692; 11.4368; 0.187643;
sp YES;
2803 2874 lipoprotein_signal_peptide
ID metaerg.pl|13609
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 16.6216; 0.0402482; 4.95692; 11.4368; 0.187643;
3551 4051 CDS
ID metaerg.pl|13610
allko_ids K07736;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia massiliensis;
genomedb_acc GCF_000455245.1;
genomedb_target db:genomedb|GCF_000455245.1|WP_044495509.1 1 162 evalue:2.6e-76 qcov:97.60 identity:93.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 16.6216; 0.0402482; 4.95692; 11.4368; 0.187643;
pfam_acc PF02559;
pfam_desc CarD-like/TRCF domain;
pfam_id CarD_CdnL_TRCF;
pfam_target db:Pfam-A.hmm|PF02559.16 evalue:6e-18 score:64.6 best_domain_score:64.0 name:CarD_CdnL_TRCF;
sprot_desc RNA polymerase-binding transcription factor CarD;
sprot_id sp|A0R561|CARD_MYCS2;
sprot_target db:uniprot_sprot|sp|A0R561|CARD_MYCS2 1 162 evalue:1.3e-58 qcov:97.60 identity:68.50;
4084 5427 CDS
ID metaerg.pl|13611
allec_ids 2.7.7.60; 4.6.1.12;
allgo_ids GO:0070567; GO:0008685; GO:0050518; GO:0046872; GO:0019288; GO:0016114;
allko_ids K04042; K02536; K11528; K12506;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia massiliensis;
genomedb_acc GCF_000455245.1;
genomedb_target db:genomedb|GCF_000455245.1|WP_044495508.1 1 446 evalue:1.4e-132 qcov:99.80 identity:60.50;
kegg_pathway_id 00540; 00530;
kegg_pathway_name Lipopolysaccharide biosynthesis; Aminosugars metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 16.6216; 0.0402482; 4.95692; 11.4368; 0.187643;
metacyc_pathway_id PWY-6270; NONMEVIPP-PWY; PWY-5121;
metacyc_pathway_name isoprene biosynthesis I;; methylerythritol phosphate pathway I;; superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP);;
metacyc_pathway_type ISOPRENOIDS; Super-Pathways;; MEP-Pathways;; DITERPENOID-SYN; GGPP-Biosynthesis; Super-Pathways;;
pfam_acc PF01128; PF12804; PF02542;
pfam_desc 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; MobA-like NTP transferase domain; YgbB family;
pfam_id IspD; NTP_transf_3; YgbB;
pfam_target db:Pfam-A.hmm|PF01128.19 evalue:7.1e-56 score:188.6 best_domain_score:187.8 name:IspD; db:Pfam-A.hmm|PF12804.7 evalue:1.6e-09 score:37.5 best_domain_score:37.5 name:NTP_transf_3; db:Pfam-A.hmm|PF02542.16 evalue:1.7e-39 score:134.8 best_domain_score:132.4 name:YgbB;
sprot_desc Bifunctional enzyme IspD/IspF;
sprot_id sp|Q6ADI0|ISPDF_LEIXX;
sprot_target db:uniprot_sprot|sp|Q6ADI0|ISPDF_LEIXX 18 446 evalue:1.6e-79 qcov:96.00 identity:46.90;
tigrfam_acc TIGR00151; TIGR00453;
tigrfam_desc 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers; Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name ispF; ispD;
tigrfam_sub1role Other; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00151 evalue:9.4e-36 score:122.4 best_domain_score:120.7 name:TIGR00151; db:TIGRFAMs.hmm|TIGR00453 evalue:9.1e-58 score:194.4 best_domain_score:194.0 name:TIGR00453;
5469 6914 CDS
ID metaerg.pl|13612
allec_ids 6.1.1.16;
allgo_ids GO:0000166; GO:0004817; GO:0005524; GO:0005737; GO:0006423; GO:0008270;
allko_ids K01883;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia massiliensis;
genomedb_acc GCF_000455245.1;
genomedb_target db:genomedb|GCF_000455245.1|WP_044495507.1 1 477 evalue:2.6e-214 qcov:99.20 identity:76.70;
kegg_pathway_id 00272; 00970;
kegg_pathway_name Cysteine metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 16.6216; 0.0402482; 4.95692; 11.4368; 0.187643;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF09190; PF00133; PF01406; PF09334;
pfam_desc DALR domain; tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (C) catalytic domain; tRNA synthetases class I (M);
pfam_id DALR_2; tRNA-synt_1; tRNA-synt_1e; tRNA-synt_1g;
pfam_target db:Pfam-A.hmm|PF09190.11 evalue:5.9e-14 score:51.5 best_domain_score:50.2 name:DALR_2; db:Pfam-A.hmm|PF00133.22 evalue:1.7e-08 score:32.4 best_domain_score:22.1 name:tRNA-synt_1; db:Pfam-A.hmm|PF01406.19 evalue:1.4e-112 score:375.2 best_domain_score:374.8 name:tRNA-synt_1e; db:Pfam-A.hmm|PF09334.11 evalue:3.3e-10 score:38.5 best_domain_score:21.7 name:tRNA-synt_1g;
sprot_desc Cysteine--tRNA ligase;
sprot_id sp|C5C8X5|SYC_MICLC;
sprot_target db:uniprot_sprot|sp|C5C8X5|SYC_MICLC 1 475 evalue:2.2e-191 qcov:98.80 identity:69.20;
tigrfam_acc TIGR00435;
tigrfam_desc cysteine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name cysS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00435 evalue:8e-133 score:443.0 best_domain_score:442.8 name:TIGR00435;
6917 7912 CDS
ID metaerg.pl|13613
allec_ids 2.1.1.-;
allgo_ids GO:0003723; GO:0006396; GO:0008173;
allko_ids K00599; K03218;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia massiliensis;
genomedb_acc GCF_000455245.1;
genomedb_target db:genomedb|GCF_000455245.1|WP_044495506.1 1 330 evalue:3.2e-142 qcov:99.70 identity:79.40;
kegg_pathway_id 00350; 00340; 00380; 00150; 00626; 00450;
kegg_pathway_name Tyrosine metabolism; Histidine metabolism; Tryptophan metabolism; Androgen and estrogen metabolism; Naphthalene and anthracene degradation; Selenoamino acid metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 16.6216; 0.0402482; 4.95692; 11.4368; 0.187643;
metacyc_pathway_id PWY-5305; PWYG-321; PWY-6113; PWY-5729; PWY-1422; PWY-5876; PWY-1061; PWY-5975; PWY-5864; PWY-5041; PWY-4021; ALL-CHORISMATE-PWY; PWY-3542; PWY-6153; PWY-6477; PWY-5467; PWY-6442; PWY-6575; CODH-PWY; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6146; PWY-6427; PWY-6395; PWY-5479; PWY-5987; PWY-6292; CO2FORM-PWY; PWY-5116; PWY-1581; METHIONINE-DEG1-PWY; PWY-5328; PWY-5773; PWY-6519; METH-ACETATE-PWY; PWY-5856; PWY-6142; UBISYN-PWY; PWY-6154; PWY-6424; PWY-5209; PWY-5855; PWY-6151; PWY-6303; PWY-5857;
metacyc_pathway_name bixin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; vitamin E biosynthesis (tocopherols);; magnoflorine biosynthesis;; homogalacturonan biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; superpathway of chorismate metabolism;; choline biosynthesis II;; autoinducer AI-2 biosynthesis I;; gibberellin inactivation II (methylation);; gramine biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; xanthohumol biosynthesis;; biotin biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; methanogenesis from acetate;; ubiquinol-9 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; S-adenosyl-L-methionine cycle I;; methyl indole-3-acetate interconversion;; ubiquinol-10 biosynthesis (prokaryotic);;
metacyc_pathway_type APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; Super-Pathways;; Choline-Biosynthesis;; Autoinducer-Biosynthesis;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Autotrophic-CO2-Fixation;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; CYSTEINE-SYN; Super-Pathways;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Super-Pathways; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; METHANOGENESIS;; Ubiquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;;
pfam_acc PF00588; PF08032;
pfam_desc SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding;
pfam_id SpoU_methylase; SpoU_sub_bind;
pfam_target db:Pfam-A.hmm|PF00588.19 evalue:5.4e-35 score:119.9 best_domain_score:117.9 name:SpoU_methylase; db:Pfam-A.hmm|PF08032.12 evalue:7.1e-18 score:63.9 best_domain_score:62.7 name:SpoU_sub_bind;
sprot_desc Uncharacterized tRNA/rRNA methyltransferase MAV_0574;
sprot_id sp|A0QAB6|Y574_MYCA1;
sprot_target db:uniprot_sprot|sp|A0QAB6|Y574_MYCA1 8 327 evalue:3.2e-72 qcov:96.70 identity:52.20;
tigrfam_acc TIGR00186;
tigrfam_desc RNA methyltransferase, TrmH family, group 3;
tigrfam_mainrole Protein synthesis;
tigrfam_name rRNA_methyl_3;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00186 evalue:6.2e-61 score:205.1 best_domain_score:204.8 name:TIGR00186;
7909 9441 CDS
ID metaerg.pl|13614
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia massiliensis;
genomedb_acc GCF_000455245.1;
genomedb_target db:genomedb|GCF_000455245.1|WP_044495505.1 6 509 evalue:6.8e-160 qcov:98.80 identity:60.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 16.6216; 0.0402482; 4.95692; 11.4368; 0.187643;
pfam_acc PF18085;
pfam_desc Maltokinase N-terminal cap domain;
pfam_id Mak_N_cap;
pfam_target db:Pfam-A.hmm|PF18085.1 evalue:9.9e-12 score:45.0 best_domain_score:43.5 name:Mak_N_cap;
9887 11106 bac_16SrRNA
ID metaerg.pl|13615
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 16.6216; 0.0402482; 4.95692; 11.4368; 0.187643;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|EU710551.1.1483 6 1220 evalue:0.0 qcov:99 identity:95.324;
rRNA_taxon Bacteria;Actinobacteria;Actinobacteria;Micrococcales;Micrococcaceae;
>Feature NODE_7964_length_10935_cov_9.23134
1621 1857 CDS
ID metaerg.pl|13616
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
2221 3849 CDS
ID metaerg.pl|13617
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
sp YES;
2221 2280 signal_peptide
ID metaerg.pl|13618
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
4984 5424 CDS
ID metaerg.pl|13619
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
5647 6000 CDS
ID metaerg.pl|13620
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
sp YES;
5647 5715 signal_peptide
ID metaerg.pl|13621
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
6174 6989 CDS
ID metaerg.pl|13622
allgo_ids GO:0016021; GO:0055085;
allko_ids K08217; K08219;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
pfam_acc PF07690;
pfam_desc Major Facilitator Superfamily;
pfam_id MFS_1;
pfam_target db:Pfam-A.hmm|PF07690.16 evalue:8.5e-34 score:116.2 best_domain_score:116.1 name:MFS_1;
tm_num 4;
6174 6989 transmembrane_helix
ID metaerg.pl|13623
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
topology i6270-6338o6351-6419i6456-6524o6537-6596i;
7537 7773 CDS
ID metaerg.pl|13624
allgo_ids GO:0009507; GO:0009941; GO:0009706; GO:0016021; GO:0009536; GO:0005315; GO:0015229; GO:0015882; GO:0010028;
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Trebouxiophyceae;no__Trebouxiophyceae incertae sedis;f__Coccomyxaceae;g__Coccomyxa;s__Coccomyxa subellipsoidea;;
genomedb_acc GCF_000258705.1;
genomedb_target db:genomedb|GCF_000258705.1|XP_005648445.1 11 78 evalue:7.2e-21 qcov:87.20 identity:72.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
sprot_desc Ascorbate transporter, chloroplastic;
sprot_id sp|Q8GX78|ANTR2_ARATH;
sprot_target db:uniprot_sprot|sp|Q8GX78|ANTR2_ARATH 11 78 evalue:6.0e-22 qcov:87.20 identity:72.10;
tm_num 2;
7537 7773 transmembrane_helix
ID metaerg.pl|13625
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
topology i7594-7662o7690-7749i;
8488 8240 CDS
ID metaerg.pl|13626
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
10140 9904 CDS
ID metaerg.pl|13627
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
sp YES;
9904 10008 signal_peptide
ID metaerg.pl|13628
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 15.8139; ; ; 15.8139;
>Feature NODE_8378_length_10610_cov_55.2659
758 1 bac_16SrRNA
ID metaerg.pl|13629
Name bac_16SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.17103; 61.3989; 0.774761; 0.811855; 64.1565;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|MEHT01000048.404.1852 1 754 evalue:0.0 qcov:99 identity:97.878;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseinatronobacter;
3205 1391 CDS
ID metaerg.pl|13630
allec_ids 3.6.3.41;
allgo_ids GO:0005524; GO:0005737; GO:0016887; GO:0003677; GO:0004832; GO:0006438;
allko_ids K02023; K01990; K02193; K05816; K02013; K09687; K01998; K10111; K01995; K02049; K02045; K11072; K01996; K06861; K02071; K02017; K02032; K02006; K02052; K01997; K05847; K09817; K02010; K15738;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797116.1 1 601 evalue:1.0e-300 qcov:99.50 identity:89.50;
kegg_pathway_id 00910; 02010;
kegg_pathway_name Nitrogen metabolism; ABC transporters - General;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.17103; 61.3989; 0.774761; 0.811855; 64.1565;
pfam_acc PF00004; PF13304; PF13401; PF13476; PF13555; PF00005; PF16326; PF01926; PF02463;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain, putative AbiEii toxin, Type IV TA system; AAA domain; AAA domain; P-loop containing region of AAA domain; ABC transporter; ABC transporter C-terminal domain; 50S ribosome-binding GTPase; RecF/RecN/SMC N terminal domain;
pfam_id AAA; AAA_21; AAA_22; AAA_23; AAA_29; ABC_tran; ABC_tran_CTD; MMR_HSR1; SMC_N;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:7.1e-05 score:22.5 best_domain_score:14.4 name:AAA; db:Pfam-A.hmm|PF13304.6 evalue:1.6e-18 score:66.8 best_domain_score:18.8 name:AAA_21; db:Pfam-A.hmm|PF13401.6 evalue:1.5e-06 score:27.8 best_domain_score:11.1 name:AAA_22; db:Pfam-A.hmm|PF13476.6 evalue:8.8e-07 score:28.8 best_domain_score:14.7 name:AAA_23; db:Pfam-A.hmm|PF13555.6 evalue:1.5e-08 score:33.5 best_domain_score:19.5 name:AAA_29; db:Pfam-A.hmm|PF00005.27 evalue:8.7e-48 score:161.5 best_domain_score:85.4 name:ABC_tran; db:Pfam-A.hmm|PF16326.5 evalue:6e-16 score:57.7 best_domain_score:56.4 name:ABC_tran_CTD; db:Pfam-A.hmm|PF01926.23 evalue:4.4e-07 score:29.2 best_domain_score:13.7 name:MMR_HSR1; db:Pfam-A.hmm|PF02463.19 evalue:1.2e-12 score:46.9 best_domain_score:17.7 name:SMC_N;
sprot_desc Holdfast attachment protein C;
sprot_id sp|Q45978|HFAC_CAUVC;
sprot_target db:uniprot_sprot|sp|Q45978|HFAC_CAUVC 2 547 evalue:8.2e-135 qcov:90.40 identity:48.60;
tigrfam_acc TIGR01189;
tigrfam_desc heme ABC exporter, ATP-binding protein CcmA;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name ccmA;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR01189 evalue:2.1e-43 score:147.4 best_domain_score:77.8 name:TIGR01189;
3554 3270 CDS
ID metaerg.pl|13631
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797115.1 1 94 evalue:2.4e-34 qcov:100.00 identity:79.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.17103; 61.3989; 0.774761; 0.811855; 64.1565;
5906 3648 CDS
ID metaerg.pl|13632
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071797114.1 1 749 evalue:0.0e+00 qcov:99.60 identity:80.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.17103; 61.3989; 0.774761; 0.811855; 64.1565;
pfam_acc PF13547; PF13550;
pfam_desc GTA TIM-barrel-like domain; Putative phage tail protein;
pfam_id GTA_TIM; Phage-tail_3;
pfam_target db:Pfam-A.hmm|PF13547.6 evalue:1.5e-85 score:286.4 best_domain_score:286.4 name:GTA_TIM; db:Pfam-A.hmm|PF13550.6 evalue:4.1e-34 score:117.0 best_domain_score:116.0 name:Phage-tail_3;
7008 5998 CDS
ID metaerg.pl|13633
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus homiensis;
genomedb_acc GCF_900111675.1;
genomedb_target db:genomedb|GCF_900111675.1|WP_090737626.1 35 328 evalue:3.2e-118 qcov:87.50 identity:73.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.17103; 61.3989; 0.774761; 0.811855; 64.1565;
pfam_acc PF09566;
pfam_desc SacI restriction endonuclease;
pfam_id RE_SacI;
pfam_target db:Pfam-A.hmm|PF09566.10 evalue:2.5e-60 score:203.8 best_domain_score:203.5 name:RE_SacI;
7119 8261 CDS
ID metaerg.pl|13634
allec_ids 2.1.1.37;
allgo_ids GO:0008168; GO:0003886; GO:0009307;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodospirillales_A;f__Thalassospiraceae;g__Thalassospira;s__Thalassospira sp000948415;
genomedb_acc GCF_000948415.1;
genomedb_target db:genomedb|GCF_000948415.1|WP_044828408.1 21 365 evalue:7.1e-114 qcov:90.80 identity:57.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.17103; 61.3989; 0.774761; 0.811855; 64.1565;
pfam_acc PF00145;
pfam_desc C-5 cytosine-specific DNA methylase;
pfam_id DNA_methylase;
pfam_target db:Pfam-A.hmm|PF00145.17 evalue:6.7e-61 score:205.7 best_domain_score:204.0 name:DNA_methylase;
sprot_desc Modification methylase NgoFVII;
sprot_id sp|Q59606|MTF7_NEIGO;
sprot_target db:uniprot_sprot|sp|Q59606|MTF7_NEIGO 7 368 evalue:4.6e-35 qcov:95.30 identity:31.10;
tigrfam_acc TIGR00675;
tigrfam_desc DNA (cytosine-5-)-methyltransferase;
tigrfam_mainrole DNA metabolism;
tigrfam_name dcm;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00675 evalue:3.7e-55 score:187.0 best_domain_score:185.5 name:TIGR00675;
8265 8891 CDS
ID metaerg.pl|13635
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.17103; 61.3989; 0.774761; 0.811855; 64.1565;
tm_num 2;
8265 8891 transmembrane_helix
ID metaerg.pl|13636
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.17103; 61.3989; 0.774761; 0.811855; 64.1565;
topology i8301-8369o8427-8495i;
9177 8938 CDS
ID metaerg.pl|13637
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseibacterium;s__Roseibacterium elongatum;
genomedb_acc GCF_000590925.1;
genomedb_target db:genomedb|GCF_000590925.1|WP_025310944.1 16 74 evalue:1.5e-10 qcov:74.70 identity:62.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.17103; 61.3989; 0.774761; 0.811855; 64.1565;
9973 9680 CDS
ID metaerg.pl|13638
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.17103; 61.3989; 0.774761; 0.811855; 64.1565;
10055 10423 CDS
ID metaerg.pl|13639
allgo_ids GO:0006355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Hyphomonadaceae;g__Hyphomonas;s__Hyphomonas oceanitis;
genomedb_acc GCF_000685295.1;
genomedb_target db:genomedb|GCF_000685295.1|WP_051624733.1 16 116 evalue:1.3e-16 qcov:82.80 identity:46.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.17103; 61.3989; 0.774761; 0.811855; 64.1565;
pfam_acc PF01402;
pfam_desc Ribbon-helix-helix protein, copG family;
pfam_id RHH_1;
pfam_target db:Pfam-A.hmm|PF01402.21 evalue:3.3e-07 score:29.2 best_domain_score:28.2 name:RHH_1;
>Feature NODE_8695_length_10344_cov_74.9999
1 183 CDS
ID metaerg.pl|13640
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
2753 348 CDS
ID metaerg.pl|13641
allec_ids 3.4.21.-;
allgo_ids GO:0004252; GO:0006508; GO:0005576;
allko_ids K14647;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583526.1 1 801 evalue:0.0e+00 qcov:100.00 identity:92.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
pfam_acc PF11614; PF13860; PF05922; PF02225; PF00082;
pfam_desc IG-like fold at C-terminal of FixG, putative oxidoreductase; FlgD Ig-like domain; Peptidase inhibitor I9; PA domain; Subtilase family;
pfam_id FixG_C; FlgD_ig; Inhibitor_I9; PA; Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF11614.8 evalue:2.6e-06 score:26.9 best_domain_score:24.5 name:FixG_C; db:Pfam-A.hmm|PF13860.6 evalue:3.6e-10 score:38.8 best_domain_score:36.2 name:FlgD_ig; db:Pfam-A.hmm|PF05922.16 evalue:3.7e-08 score:33.2 best_domain_score:32.2 name:Inhibitor_I9; db:Pfam-A.hmm|PF02225.22 evalue:5.2e-15 score:54.5 best_domain_score:51.9 name:PA; db:Pfam-A.hmm|PF00082.22 evalue:2.9e-79 score:265.7 best_domain_score:265.2 name:Peptidase_S8;
sp YES;
sprot_desc Minor extracellular protease vpr;
sprot_id sp|P29141|SUBV_BACSU;
sprot_target db:uniprot_sprot|sp|P29141|SUBV_BACSU 16 783 evalue:4.9e-220 qcov:95.90 identity:52.80;
348 431 signal_peptide
ID metaerg.pl|13642
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
3905 4426 CDS
ID metaerg.pl|13643
allec_ids 3.4.21.89;
allgo_ids GO:0016021; GO:0005886; GO:0008236;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583527.1 1 173 evalue:1.5e-90 qcov:100.00 identity:97.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
pfam_acc PF00717; PF10502;
pfam_desc Peptidase S24-like; Signal peptidase, peptidase S26;
pfam_id Peptidase_S24; Peptidase_S26;
pfam_target db:Pfam-A.hmm|PF00717.23 evalue:1e-19 score:69.4 best_domain_score:68.4 name:Peptidase_S24; db:Pfam-A.hmm|PF10502.9 evalue:6.7e-09 score:34.9 best_domain_score:34.4 name:Peptidase_S26;
sp YES;
sprot_desc Signal peptidase I;
sprot_id sp|P42668|LEP_BACLI;
sprot_target db:uniprot_sprot|sp|P42668|LEP_BACLI 3 173 evalue:1.5e-41 qcov:98.80 identity:48.60;
tigrfam_acc TIGR02227;
tigrfam_desc signal peptidase I;
tigrfam_mainrole Protein fate;
tigrfam_name sigpep_I_bact;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02227 evalue:9.3e-46 score:154.8 best_domain_score:154.6 name:TIGR02227;
tm_num 1;
3905 4018 signal_peptide
ID metaerg.pl|13644
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
3905 4426 transmembrane_helix
ID metaerg.pl|13645
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
topology i3941-4009o;
5135 4923 CDS
ID metaerg.pl|13646
allgo_ids GO:0005887; GO:0033281; GO:0009977; GO:0065002; GO:0043953;
allko_ids K03118;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583663.1 14 70 evalue:1.1e-15 qcov:81.40 identity:87.70;
kegg_pathway_id 03060;
kegg_pathway_name Protein export;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
sprot_desc Sec-independent protein translocase protein TatCd;
sprot_id sp|P42252|TATCD_BACSU;
sprot_target db:uniprot_sprot|sp|P42252|TATCD_BACSU 14 70 evalue:1.1e-06 qcov:81.40 identity:43.90;
tm_num 2;
5135 4923 transmembrane_helix
ID metaerg.pl|13647
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
topology i4941-5009o5019-5084i;
5377 5141 CDS
ID metaerg.pl|13648
allgo_ids GO:0008565; GO:0015031;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583529.1 1 77 evalue:1.1e-24 qcov:98.70 identity:88.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
pfam_acc PF02416;
pfam_desc mttA/Hcf106 family;
pfam_id MttA_Hcf106;
pfam_target db:Pfam-A.hmm|PF02416.16 evalue:8.2e-20 score:69.1 best_domain_score:67.2 name:MttA_Hcf106;
sp YES;
tigrfam_acc TIGR01411;
tigrfam_desc twin arginine-targeting protein translocase, TatA/E family;
tigrfam_mainrole Protein fate;
tigrfam_name tatAE;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR01411 evalue:1.4e-18 score:65.4 best_domain_score:64.8 name:TIGR01411;
tm_num 1;
5141 5233 signal_peptide
ID metaerg.pl|13649
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
5377 5141 transmembrane_helix
ID metaerg.pl|13650
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
topology o5150-5203i;
6046 7095 CDS
ID metaerg.pl|13651
allgo_ids GO:0005524; GO:0016491; GO:0055114; GO:0051539; GO:0016887; GO:0046872; GO:0016226; GO:0045892;
allko_ids K03593;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583532.1 1 349 evalue:4.8e-189 qcov:100.00 identity:98.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
pfam_acc PF13614; PF02374; PF01656; PF00142; PF01883; PF09140; PF10609;
pfam_desc AAA domain; Anion-transporting ATPase; CobQ/CobB/MinD/ParA nucleotide binding domain; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; Iron-sulfur cluster assembly protein; ATPase MipZ; NUBPL iron-transfer P-loop NTPase;
pfam_id AAA_31; ArsA_ATPase; CbiA; Fer4_NifH; FeS_assembly_P; MipZ; ParA;
pfam_target db:Pfam-A.hmm|PF13614.6 evalue:2.7e-13 score:49.4 best_domain_score:41.0 name:AAA_31; db:Pfam-A.hmm|PF02374.15 evalue:1.9e-07 score:29.8 best_domain_score:28.3 name:ArsA_ATPase; db:Pfam-A.hmm|PF01656.23 evalue:4.2e-13 score:48.7 best_domain_score:47.8 name:CbiA; db:Pfam-A.hmm|PF00142.18 evalue:1.1e-09 score:37.4 best_domain_score:23.2 name:Fer4_NifH; db:Pfam-A.hmm|PF01883.19 evalue:6.4e-09 score:35.1 best_domain_score:35.0 name:FeS_assembly_P; db:Pfam-A.hmm|PF09140.11 evalue:1.2e-07 score:30.6 best_domain_score:29.8 name:MipZ; db:Pfam-A.hmm|PF10609.9 evalue:2.6e-83 score:278.5 best_domain_score:278.0 name:ParA;
sprot_desc Iron-sulfur cluster carrier protein;
sprot_id sp|P50863|APBC_BACSU;
sprot_target db:uniprot_sprot|sp|P50863|APBC_BACSU 1 346 evalue:7.3e-128 qcov:99.10 identity:65.20;
7343 8035 CDS
ID metaerg.pl|13652
allgo_ids GO:0045881; GO:0016021; GO:0005886; GO:0030435;
allko_ids K06349;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583533.1 1 230 evalue:1.9e-114 qcov:100.00 identity:96.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
pfam_acc PF14089;
pfam_desc KinB-signalling pathway activation in sporulation;
pfam_id KbaA;
pfam_target db:Pfam-A.hmm|PF14089.6 evalue:1.5e-67 score:226.2 best_domain_score:225.9 name:KbaA;
sprot_desc KinB-signaling pathway activation protein;
sprot_id sp|P16449|KBAA_BACSU;
sprot_target db:uniprot_sprot|sp|P16449|KBAA_BACSU 1 194 evalue:1.3e-32 qcov:84.30 identity:39.90;
tm_num 6;
7343 8035 transmembrane_helix
ID metaerg.pl|13653
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
topology i7361-7429o7472-7540i7577-7645o7673-7732i7769-7828o7841-7909i;
8232 8344 bac_5SrRNA
ID metaerg.pl|13654
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
8403 8477 tRNA
ID metaerg.pl|13655
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
name tRNA_Asn_gtt;
8481 8556 tRNA
ID metaerg.pl|13656
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
name tRNA_Thr_ggt;
9148 9405 CDS
ID metaerg.pl|13657
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583534.1 1 85 evalue:1.6e-42 qcov:100.00 identity:98.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
pfam_acc PF08980;
pfam_desc Domain of unknown function (DUF1883);
pfam_id DUF1883;
pfam_target db:Pfam-A.hmm|PF08980.10 evalue:1.6e-18 score:65.6 best_domain_score:65.6 name:DUF1883;
10174 10248 tRNA
ID metaerg.pl|13658
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0856386; 119.896; 0.280753; 111.293; 8.23681;
name tRNA_Glu_ttc;
>Feature NODE_8789_length_10279_cov_8.951
1551 1264 CDS
ID metaerg.pl|13659
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
2032 1790 CDS
ID metaerg.pl|13660
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
2951 3256 CDS
ID metaerg.pl|13661
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
3320 3736 CDS
ID metaerg.pl|13662
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
3941 4183 CDS
ID metaerg.pl|13663
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
4338 4652 CDS
ID metaerg.pl|13664
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
4937 5263 CDS
ID metaerg.pl|13665
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
5341 5847 CDS
ID metaerg.pl|13666
allgo_ids GO:0005096;
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Chlorophyceae;o__Chlamydomonadales;f__Volvocaceae;g__Volvox;s__Volvox carteri;;
genomedb_acc GCF_000143455.1;
genomedb_target db:genomedb|GCF_000143455.1|XP_002955727.1 28 161 evalue:5.7e-23 qcov:79.80 identity:44.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
pfam_acc PF00566;
pfam_desc Rab-GTPase-TBC domain;
pfam_id RabGAP-TBC;
pfam_target db:Pfam-A.hmm|PF00566.18 evalue:2.2e-09 score:36.5 best_domain_score:36.1 name:RabGAP-TBC;
sprot_desc TBC1 domain family member 19;
sprot_id sp|Q8N5T2|TBC19_HUMAN;
sprot_target db:uniprot_sprot|sp|Q8N5T2|TBC19_HUMAN 29 158 evalue:9.5e-17 qcov:77.40 identity:42.40;
6349 6038 CDS
ID metaerg.pl|13667
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
tm_num 1;
6349 6038 transmembrane_helix
ID metaerg.pl|13668
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
topology i6254-6307o;
7563 7865 CDS
ID metaerg.pl|13669
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
7977 8912 CDS
ID metaerg.pl|13670
allgo_ids GO:0003777; GO:0005524; GO:0007018; GO:0008017;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
pfam_acc PF00225;
pfam_desc Kinesin motor domain;
pfam_id Kinesin;
pfam_target db:Pfam-A.hmm|PF00225.23 evalue:6.6e-14 score:50.8 best_domain_score:50.5 name:Kinesin;
8959 9564 CDS
ID metaerg.pl|13671
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
9579 10127 CDS
ID metaerg.pl|13672
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 15.3995; ; 15.3995;
>Feature NODE_9055_length_10104_cov_62.8574
57 287 CDS
ID metaerg.pl|13673
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584822.1 1 75 evalue:1.4e-29 qcov:98.70 identity:93.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
tm_num 2;
57 287 transmembrane_helix
ID metaerg.pl|13674
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
topology i93-161o189-257i;
1049 363 CDS
ID metaerg.pl|13675
allgo_ids GO:0008745; GO:0009253;
allko_ids K01449; K11066; K01447; K01448; K01446;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584823.1 1 228 evalue:7.1e-109 qcov:100.00 identity:82.50;
kegg_pathway_id 00550;
kegg_pathway_name Peptidoglycan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
pfam_acc PF01510; PF01471;
pfam_desc N-acetylmuramoyl-L-alanine amidase; Putative peptidoglycan binding domain;
pfam_id Amidase_2; PG_binding_1;
pfam_target db:Pfam-A.hmm|PF01510.25 evalue:2.2e-25 score:88.8 best_domain_score:88.3 name:Amidase_2; db:Pfam-A.hmm|PF01471.18 evalue:1.2e-15 score:56.7 best_domain_score:55.8 name:PG_binding_1;
1324 2832 CDS
ID metaerg.pl|13676
allgo_ids GO:0016020; GO:0022857; GO:0071705; GO:0016021; GO:0005886; GO:0015199; GO:0006865; GO:0031460; GO:0009409; GO:0006970;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584824.1 1 502 evalue:1.7e-264 qcov:100.00 identity:93.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
pfam_acc PF02028;
pfam_desc BCCT, betaine/carnitine/choline family transporter;
pfam_id BCCT;
pfam_target db:Pfam-A.hmm|PF02028.17 evalue:9.1e-186 score:617.2 best_domain_score:617.0 name:BCCT;
sprot_desc Glycine betaine transporter BetL;
sprot_id sp|Q9X4A5|BETL_LISMN;
sprot_target db:uniprot_sprot|sp|Q9X4A5|BETL_LISMN 1 502 evalue:2.9e-162 qcov:100.00 identity:57.00;
tigrfam_acc TIGR00842;
tigrfam_desc transporter, betaine/carnitine/choline transporter (BCCT) family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name bcct;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00842 evalue:2.4e-159 score:530.0 best_domain_score:529.5 name:TIGR00842;
tm_num 12;
1324 2832 transmembrane_helix
ID metaerg.pl|13677
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
topology i1342-1410o1453-1521i1570-1638o1720-1788i1876-1944o1987-2055i2074-2142o2242-2310i2347-2406o2506-2574i2635-2703o2713-2772i;
4368 3784 CDS
ID metaerg.pl|13678
allec_ids 3.4.21.89;
allgo_ids GO:0016021; GO:0005886; GO:0008236;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584836.1 23 194 evalue:1.5e-88 qcov:88.70 identity:94.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
pfam_acc PF00717; PF10502;
pfam_desc Peptidase S24-like; Signal peptidase, peptidase S26;
pfam_id Peptidase_S24; Peptidase_S26;
pfam_target db:Pfam-A.hmm|PF00717.23 evalue:2.2e-20 score:71.6 best_domain_score:70.7 name:Peptidase_S24; db:Pfam-A.hmm|PF10502.9 evalue:1.7e-10 score:40.0 best_domain_score:38.6 name:Peptidase_S26;
sprot_desc Signal peptidase I;
sprot_id sp|P41027|LEP_BACCL;
sprot_target db:uniprot_sprot|sp|P41027|LEP_BACCL 20 192 evalue:6.0e-39 qcov:89.20 identity:46.80;
tigrfam_acc TIGR02227;
tigrfam_desc signal peptidase I;
tigrfam_mainrole Protein fate;
tigrfam_name sigpep_I_bact;
tigrfam_sub1role Protein and peptide secretion and trafficking;
tigrfam_target db:TIGRFAMs.hmm|TIGR02227 evalue:3e-53 score:179.2 best_domain_score:178.9 name:TIGR02227;
tm_num 1;
4368 3784 transmembrane_helix
ID metaerg.pl|13679
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
topology i3841-3909o;
5158 4853 CDS
ID metaerg.pl|13680
allec_ids 1.14.99.48;
allgo_ids GO:0005737; GO:0020037; GO:0004392; GO:0005506; GO:0004497; GO:0042167; GO:0033212;
allko_ids K07145;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584826.1 1 101 evalue:2.3e-51 qcov:100.00 identity:98.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
pfam_acc PF03992;
pfam_desc Antibiotic biosynthesis monooxygenase;
pfam_id ABM;
pfam_target db:Pfam-A.hmm|PF03992.16 evalue:1.3e-14 score:53.3 best_domain_score:53.0 name:ABM;
sprot_desc Heme oxygenase (staphylobilin-producing) 2;
sprot_id sp|Q2FK96|HDOX2_STAA3;
sprot_target db:uniprot_sprot|sp|Q2FK96|HDOX2_STAA3 1 100 evalue:1.8e-07 qcov:99.00 identity:31.10;
5954 5463 CDS
ID metaerg.pl|13681
allec_ids 2.1.1.207;
allgo_ids GO:0003723; GO:0006396; GO:0008173; GO:0005737; GO:0008757; GO:0008175;
allko_ids K03216;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584827.1 1 163 evalue:2.1e-83 qcov:100.00 identity:93.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
pfam_acc PF00588;
pfam_desc SpoU rRNA Methylase family;
pfam_id SpoU_methylase;
pfam_target db:Pfam-A.hmm|PF00588.19 evalue:5.3e-31 score:106.9 best_domain_score:106.7 name:SpoU_methylase;
sprot_desc Putative tRNA (cytidine(34)-2'-O)-methyltransferase;
sprot_id sp|Q721N0|TRML_LISMF;
sprot_target db:uniprot_sprot|sp|Q721N0|TRML_LISMF 1 156 evalue:3.5e-56 qcov:95.70 identity:64.70;
tigrfam_acc TIGR00185;
tigrfam_desc tRNA (cytidine(34)-2'-O)-methyltransferase;
tigrfam_mainrole Protein synthesis;
tigrfam_name tRNA_yibK_trmL;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00185 evalue:9.5e-60 score:200.1 best_domain_score:199.9 name:TIGR00185;
6493 5981 CDS
ID metaerg.pl|13682
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584828.1 1 170 evalue:1.1e-82 qcov:100.00 identity:89.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
sp YES;
5981 6025 lipoprotein_signal_peptide
ID metaerg.pl|13683
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
7074 6550 CDS
ID metaerg.pl|13684
allec_ids 2.1.1.63;
allgo_ids GO:0003824; GO:0006281; GO:0005737; GO:0003908; GO:0006307;
allko_ids K13531; K00567; K10778; K13529;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584829.1 1 174 evalue:4.8e-89 qcov:100.00 identity:94.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
pfam_acc PF01035; PF02870;
pfam_desc 6-O-methylguanine DNA methyltransferase, DNA binding domain; 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain;
pfam_id DNA_binding_1; Methyltransf_1N;
pfam_target db:Pfam-A.hmm|PF01035.20 evalue:1.7e-31 score:107.4 best_domain_score:106.8 name:DNA_binding_1; db:Pfam-A.hmm|PF02870.15 evalue:2.4e-05 score:24.3 best_domain_score:23.7 name:Methyltransf_1N;
sprot_desc Methylated-DNA--protein-cysteine methyltransferase;
sprot_id sp|Q8TI34|OGT_METAC;
sprot_target db:uniprot_sprot|sp|Q8TI34|OGT_METAC 4 167 evalue:6.2e-35 qcov:94.30 identity:48.20;
tigrfam_acc TIGR00589;
tigrfam_desc methylated-DNA--[protein]-cysteine S-methyltransferase;
tigrfam_mainrole DNA metabolism;
tigrfam_name ogt;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00589 evalue:1.1e-34 score:117.5 best_domain_score:117.0 name:TIGR00589;
8281 7136 CDS
ID metaerg.pl|13685
allec_ids 1.17.99.6; 1.-.-.-;
allgo_ids GO:0005737; GO:0051539; GO:0052693; GO:0046872; GO:0008616; GO:0008033;
allko_ids K00204; K11260; K00443; K00240; K00123; K00124; K00265; K00390; K00176; K03388; K00171; K00441; K00205; K18979;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107584830.1 1 381 evalue:2.9e-208 qcov:100.00 identity:93.70;
kegg_pathway_id 00251; 00633; 00620; 00910; 00190; 00630; 00680; 00640; 00650; 00790; 00720; 00920; 00010; 00020; 00632;
kegg_pathway_name Glutamate metabolism; Trinitrotoluene degradation; Pyruvate metabolism; Nitrogen metabolism; Oxidative phosphorylation; Glyoxylate and dicarboxylate metabolism; Methane metabolism; Propanoate metabolism; Butanoate metabolism; Folate biosynthesis; Reductive carboxylate cycle (CO2 fixation); Sulfur metabolism; Glycolysis / Gluconeogenesis; Citrate cycle (TCA cycle); Benzoate degradation via CoA ligation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
metacyc_pathway_id PWY-4302; PWY-5271; PWY-2821; PWY-5826; PWY-5469; PWY-5987; PWY-5479; PWY-6113; PWYG-321;
metacyc_pathway_name aerobic respiration III (alternative oxidase pathway);; abscisic acid degradation to phaseic acid;; glucosinolate biosynthesis from phenylalanine;; hypoglycin biosynthesis;; sesamin biosynthesis;; sorgoleone biosynthesis;; 6-methoxypodophyllotoxin biosynthesis;; superpathway of mycolate biosynthesis;; mycolate biosynthesis;;
metacyc_pathway_type AEROBIC-RESPIRATION; Electron-Transfer;; Abscisic-Acid-Degradation;; GLUCOSINOLATE-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; LIGNAN-SYN;; QUINONE-SYN;; LIGNAN-SYN;; Fatty-acid-biosynthesis; Super-Pathways;; Fatty-acid-biosynthesis;;
pfam_acc PF08331; PF13484; PF13646;
pfam_desc Domain of unknown function (DUF1730); 4Fe-4S double cluster binding domain; HEAT repeats;
pfam_id DUF1730; Fer4_16; HEAT_2;
pfam_target db:Pfam-A.hmm|PF08331.10 evalue:1.4e-20 score:72.2 best_domain_score:70.9 name:DUF1730; db:Pfam-A.hmm|PF13484.6 evalue:1.4e-15 score:57.2 best_domain_score:55.9 name:Fer4_16; db:Pfam-A.hmm|PF13646.6 evalue:2.4e-12 score:46.3 best_domain_score:45.4 name:HEAT_2;
sprot_desc Epoxyqueuosine reductase;
sprot_id sp|Q81I72|QUEG_BACCR;
sprot_target db:uniprot_sprot|sp|Q81I72|QUEG_BACCR 5 369 evalue:1.1e-145 qcov:95.80 identity:66.30;
tigrfam_acc TIGR00276;
tigrfam_desc epoxyqueuosine reductase;
tigrfam_mainrole Protein synthesis;
tigrfam_name TIGR00276;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00276 evalue:3.2e-127 score:423.3 best_domain_score:423.1 name:TIGR00276;
8568 8483 tRNA
ID metaerg.pl|13686
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Leu_caa;
8676 8587 tRNA
ID metaerg.pl|13687
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Leu_taa;
8785 8712 tRNA
ID metaerg.pl|13688
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Cys_gca;
8871 8797 tRNA
ID metaerg.pl|13689
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Gly_gcc;
8951 8877 tRNA
ID metaerg.pl|13690
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Gln_ttg;
9040 8965 tRNA
ID metaerg.pl|13691
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_His_gtg;
9142 9058 tRNA
ID metaerg.pl|13692
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Tyr_gta;
9308 9233 tRNA
ID metaerg.pl|13693
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Thr_tgt;
9389 9314 tRNA
ID metaerg.pl|13694
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Phe_gaa;
9476 9400 tRNA
ID metaerg.pl|13695
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Met_cat;
9562 9487 tRNA
ID metaerg.pl|13696
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Val_tac;
9682 9608 tRNA
ID metaerg.pl|13697
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Glu_ttc;
9779 9687 tRNA
ID metaerg.pl|13698
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Ser_gga;
9857 9783 tRNA
ID metaerg.pl|13699
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 98.4427; 0.0147679; 91.6656; 6.47499; 0.287523;
name tRNA_Asn_gtt;
>Feature NODE_9360_length_9884_cov_50.2958
493 1860 CDS
ID metaerg.pl|13700
allec_ids 1.2.1.79;
allgo_ids GO:0016491; GO:0055114; GO:0004777; GO:0009013; GO:0009450;
allko_ids K13821; K00155; K00135; K00294;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091392.1 1 454 evalue:1.5e-243 qcov:99.80 identity:94.30;
kegg_pathway_id 00903; 00251; 00330; 00350; 00650; 00626; 00281; 00624; 00380;
kegg_pathway_name Limonene and pinene degradation; Glutamate metabolism; Arginine and proline metabolism; Tyrosine metabolism; Butanoate metabolism; Naphthalene and anthracene degradation; Geraniol degradation; 1- and 2-Methylnaphthalene degradation; Tryptophan metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.179166; 76.7766; 0.100062; 76.4973; ;
pfam_acc PF00171;
pfam_desc Aldehyde dehydrogenase family;
pfam_id Aldedh;
pfam_target db:Pfam-A.hmm|PF00171.22 evalue:5.6e-133 score:443.1 best_domain_score:442.9 name:Aldedh;
sprot_desc Probable succinate-semialdehyde dehydrogenase [NADP(+)];
sprot_id sp|Q55585|GABD_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55585|GABD_SYNY3 1 454 evalue:6.1e-167 qcov:99.80 identity:64.50;
2053 3696 CDS
ID metaerg.pl|13701
allec_ids 2.2.1.6;
allgo_ids GO:0003824; GO:0030976; GO:0003984; GO:0000287; GO:0045151; GO:0034077;
allko_ids K12253; K01652; K12732; K01637; K03852; K01568; K04103; K01576;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091393.1 1 545 evalue:0.0e+00 qcov:99.60 identity:97.80;
kegg_pathway_id 00362; 00660; 00650; 00630; 00010; 00622; 00290; 00380; 00430; 00770;
kegg_pathway_name Benzoate degradation via hydroxylation; C5-Branched dibasic acid metabolism; Butanoate metabolism; Glyoxylate and dicarboxylate metabolism; Glycolysis / Gluconeogenesis; Toluene and xylene degradation; Valine, leucine and isoleucine biosynthesis; Tryptophan metabolism; Taurine and hypotaurine metabolism; Pantothenate and CoA biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.179166; 76.7766; 0.100062; 76.4973; ;
metacyc_pathway_id PWY-5103; PWY-6396; BRANCHED-CHAIN-AA-SYN-PWY; PWY-6389; PWY-5104; ILEUSYN-PWY; PWY-5939; VALSYN-PWY; PWY-5101; PWY-3001; THREOCAT-PWY; PWY-5938;
metacyc_pathway_name L-isoleucine biosynthesis III;; superpathway of 2,3-butanediol biosynthesis;; superpathway of branched chain amino acid biosynthesis;; pyruvate fermentation to (S)-acetoin;; L-isoleucine biosynthesis IV;; L-isoleucine biosynthesis I (from threonine);; pyruvate fermentation to (R)-acetoin II;; L-valine biosynthesis;; L-isoleucine biosynthesis II;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-threonine metabolism;; pyruvate fermentation to (R)-acetoin I;;
metacyc_pathway_type ISOLEUCINE-SYN;; Butanediol-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;; VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; Super-Pathways; THREONINE-DEG;; Acetoin-Biosynthesis;;
pfam_acc PF02775; PF00205; PF02776;
pfam_desc Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain;
pfam_id TPP_enzyme_C; TPP_enzyme_M; TPP_enzyme_N;
pfam_target db:Pfam-A.hmm|PF02775.21 evalue:6.6e-46 score:155.1 best_domain_score:153.9 name:TPP_enzyme_C; db:Pfam-A.hmm|PF00205.22 evalue:2.9e-35 score:120.2 best_domain_score:118.7 name:TPP_enzyme_M; db:Pfam-A.hmm|PF02776.18 evalue:1.7e-55 score:186.5 best_domain_score:182.9 name:TPP_enzyme_N;
sprot_desc Acetolactate synthase;
sprot_id sp|Q04789|ILVX_BACSU;
sprot_target db:uniprot_sprot|sp|Q04789|ILVX_BACSU 4 533 evalue:1.4e-96 qcov:96.90 identity:37.30;
4211 3873 CDS
ID metaerg.pl|13702
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197465.1 1 112 evalue:1.2e-53 qcov:100.00 identity:89.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.179166; 76.7766; 0.100062; 76.4973; ;
4856 5218 CDS
ID metaerg.pl|13703
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089091395.1 1 120 evalue:3.7e-56 qcov:100.00 identity:97.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.179166; 76.7766; 0.100062; 76.4973; ;
pfam_acc PF09585;
pfam_desc Conserved hypothetical protein (Lin0512_fam);
pfam_id Lin0512_fam;
pfam_target db:Pfam-A.hmm|PF09585.10 evalue:3.9e-42 score:142.1 best_domain_score:141.9 name:Lin0512_fam;
tigrfam_acc TIGR02058;
tigrfam_desc conserved hypothetical protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name lin0512_fam;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR02058 evalue:3.8e-49 score:164.7 best_domain_score:164.5 name:TIGR02058;
5533 5252 CDS
ID metaerg.pl|13704
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_063873318.1 1 93 evalue:1.5e-36 qcov:100.00 identity:92.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.179166; 76.7766; 0.100062; 76.4973; ;
7453 5687 CDS
ID metaerg.pl|13705
allec_ids 6.1.1.19;
allgo_ids GO:0000166; GO:0004814; GO:0005524; GO:0005737; GO:0006420;
allko_ids K01887;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804234.1 1 588 evalue:0.0e+00 qcov:100.00 identity:96.90;
kegg_pathway_id 00970; 00330;
kegg_pathway_name Aminoacyl-tRNA biosynthesis; Arginine and proline metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.179166; 76.7766; 0.100062; 76.4973; ;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF03485; PF05746; PF00750;
pfam_desc Arginyl tRNA synthetase N terminal domain; DALR anticodon binding domain; tRNA synthetases class I (R);
pfam_id Arg_tRNA_synt_N; DALR_1; tRNA-synt_1d;
pfam_target db:Pfam-A.hmm|PF03485.16 evalue:1.8e-23 score:82.2 best_domain_score:80.2 name:Arg_tRNA_synt_N; db:Pfam-A.hmm|PF05746.15 evalue:5.1e-32 score:109.8 best_domain_score:107.9 name:DALR_1; db:Pfam-A.hmm|PF00750.19 evalue:3.8e-135 score:449.5 best_domain_score:449.2 name:tRNA-synt_1d;
sprot_desc Arginine--tRNA ligase;
sprot_id sp|Q8YQU9|SYR_NOSS1;
sprot_target db:uniprot_sprot|sp|Q8YQU9|SYR_NOSS1 1 588 evalue:3.2e-301 qcov:100.00 identity:88.30;
tigrfam_acc TIGR00456;
tigrfam_desc arginine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name argS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00456 evalue:1.8e-173 score:577.1 best_domain_score:576.9 name:TIGR00456;
8175 7489 CDS
ID metaerg.pl|13706
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804233.1 1 228 evalue:1.5e-111 qcov:100.00 identity:92.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.179166; 76.7766; 0.100062; 76.4973; ;
pfam_acc PF18743;
pfam_desc REase_AHJR-like;
pfam_id AHJR-like;
pfam_target db:Pfam-A.hmm|PF18743.1 evalue:1.1e-48 score:163.1 best_domain_score:162.5 name:AHJR-like;
8579 8175 CDS
ID metaerg.pl|13707
allgo_ids GO:0000287; GO:0006281; GO:0006310;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804232.1 1 134 evalue:1.5e-66 qcov:100.00 identity:97.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.179166; 76.7766; 0.100062; 76.4973; ;
pfam_acc PF05866;
pfam_desc Endodeoxyribonuclease RusA;
pfam_id RusA;
pfam_target db:Pfam-A.hmm|PF05866.11 evalue:3.4e-11 score:43.0 best_domain_score:42.3 name:RusA;
9518 8655 CDS
ID metaerg.pl|13708
allec_ids 2.4.2.19;
allgo_ids GO:0004514; GO:0009435; GO:0005737; GO:0034213;
allko_ids K03813; K00767;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_017804231.1 1 286 evalue:2.9e-152 qcov:99.70 identity:97.90;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.179166; 76.7766; 0.100062; 76.4973; ;
metacyc_pathway_id PWY-3502; PYRIDNUCSYN-PWY; PWY-5653; PWY0-781; NADSYN-PWY;
metacyc_pathway_name superpathway of NAD biosynthesis in eukaryotes;; NAD de novo biosynthesis I (from aspartate);; NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde;; aspartate superpathway;; NAD de novo biosynthesis II (from tryptophan);;
metacyc_pathway_type NAD-SYN; Super-Pathways;; NAD-SYN;; NAD-SYN;; Super-Pathways;; NAD-SYN; Super-Pathways;;
pfam_acc PF01729; PF02749;
pfam_desc Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain;
pfam_id QRPTase_C; QRPTase_N;
pfam_target db:Pfam-A.hmm|PF01729.19 evalue:3.1e-65 score:218.3 best_domain_score:217.9 name:QRPTase_C; db:Pfam-A.hmm|PF02749.16 evalue:5.6e-26 score:89.7 best_domain_score:88.6 name:QRPTase_N;
sprot_desc Probable nicotinate-nucleotide pyrophosphorylase [carboxylating];
sprot_id sp|P74301|NADC_SYNY3;
sprot_target db:uniprot_sprot|sp|P74301|NADC_SYNY3 7 286 evalue:6.5e-90 qcov:97.60 identity:58.60;
tigrfam_acc TIGR00078;
tigrfam_desc nicotinate-nucleotide diphosphorylase (carboxylating);
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name nadC;
tigrfam_sub1role Pyridine nucleotides;
tigrfam_target db:TIGRFAMs.hmm|TIGR00078 evalue:9e-101 score:335.8 best_domain_score:335.6 name:TIGR00078;
>Feature NODE_9371_length_9877_cov_14.9059
1333 2 CDS
ID metaerg.pl|13709
allec_ids 7.1.1.1;
allgo_ids GO:0016021; GO:0005886; GO:0008750; GO:0050661;
allko_ids K00325;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665210.1 4 444 evalue:1.7e-159 qcov:99.30 identity:72.20;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
pfam_acc PF02233;
pfam_desc NAD(P) transhydrogenase beta subunit;
pfam_id PNTB;
pfam_target db:Pfam-A.hmm|PF02233.16 evalue:3.1e-155 score:516.8 best_domain_score:516.6 name:PNTB;
sprot_desc NAD(P) transhydrogenase subunit beta;
sprot_id sp|Q2RSB4|PNTB_RHORT;
sprot_target db:uniprot_sprot|sp|Q2RSB4|PNTB_RHORT 17 443 evalue:5.3e-83 qcov:96.20 identity:46.80;
tm_num 9;
1333 2 transmembrane_helix
ID metaerg.pl|13710
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
topology o14-67i101-169o179-232i269-337o380-448i506-565o575-643i662-730o740-808i;
1611 1330 CDS
ID metaerg.pl|13711
allec_ids 7.1.1.1;
allgo_ids GO:0016021; GO:0005886;
allko_ids K00324;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665211.1 1 93 evalue:6.4e-32 qcov:100.00 identity:83.90;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
pfam_acc PF12769;
pfam_desc 4TM region of pyridine nucleotide transhydrogenase, mitoch;
pfam_id PNTB_4TM;
pfam_target db:Pfam-A.hmm|PF12769.7 evalue:1.5e-29 score:101.5 best_domain_score:101.2 name:PNTB_4TM;
sprot_desc NAD(P) transhydrogenase subunit alpha part 2;
sprot_id sp|P51995|PNTAB_RICPR;
sprot_target db:uniprot_sprot|sp|P51995|PNTAB_RICPR 3 89 evalue:1.8e-12 qcov:93.50 identity:50.00;
tm_num 3;
1611 1330 transmembrane_helix
ID metaerg.pl|13712
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
topology i1342-1398o1426-1494i1507-1575o;
2741 1611 CDS
ID metaerg.pl|13713
allec_ids 7.1.1.1;
allgo_ids GO:0051287; GO:0008750; GO:0003957; GO:0070403; GO:0070404; GO:0046983; GO:0006740;
allko_ids K00325; K00323; K00324; K00259; K00322;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665212.1 1 370 evalue:2.7e-129 qcov:98.40 identity:69.60;
kegg_pathway_id 00430; 00760; 00720;
kegg_pathway_name Taurine and hypotaurine metabolism; Nicotinate and nicotinamide metabolism; Reductive carboxylate cycle (CO2 fixation);
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
pfam_acc PF01262; PF05222;
pfam_desc Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain;
pfam_id AlaDh_PNT_C; AlaDh_PNT_N;
pfam_target db:Pfam-A.hmm|PF01262.21 evalue:2.8e-63 score:212.3 best_domain_score:211.9 name:AlaDh_PNT_C; db:Pfam-A.hmm|PF05222.15 evalue:1e-41 score:141.6 best_domain_score:140.8 name:AlaDh_PNT_N;
sprot_desc NAD(P) transhydrogenase subunit alpha part 1;
sprot_id sp|Q2RSB2|PNTAA_RHORT;
sprot_target db:uniprot_sprot|sp|Q2RSB2|PNTAA_RHORT 5 364 evalue:4.7e-80 qcov:95.70 identity:48.50;
2884 3894 CDS
ID metaerg.pl|13714
allec_ids 1.1.1.86;
allgo_ids GO:0051287; GO:0055114; GO:0004455; GO:0000287; GO:0050661; GO:0009097; GO:0009099;
allko_ids K00053;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052664679.1 2 333 evalue:1.5e-147 qcov:98.80 identity:79.80;
kegg_pathway_id 00770; 00290;
kegg_pathway_name Pantothenate and CoA biosynthesis; Valine, leucine and isoleucine biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
metacyc_pathway_id PWY-3001; THREOCAT-PWY; VALSYN-PWY; PWY-5101; ILEUSYN-PWY; PWY-5103; PWY-5104; BRANCHED-CHAIN-AA-SYN-PWY;
metacyc_pathway_name superpathway of L-isoleucine biosynthesis I;; superpathway of L-threonine metabolism;; L-valine biosynthesis;; L-isoleucine biosynthesis II;; L-isoleucine biosynthesis I (from threonine);; L-isoleucine biosynthesis III;; L-isoleucine biosynthesis IV;; superpathway of branched chain amino acid biosynthesis;;
metacyc_pathway_type ISOLEUCINE-SYN; Super-Pathways;; Super-Pathways; THREONINE-DEG;; VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF02826; PF03807; PF01450; PF07991;
pfam_desc D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; NADP oxidoreductase coenzyme F420-dependent; Acetohydroxy acid isomeroreductase, catalytic domain; Acetohydroxy acid isomeroreductase, NADPH-binding domain;
pfam_id 2-Hacid_dh_C; F420_oxidored; IlvC; IlvN;
pfam_target db:Pfam-A.hmm|PF02826.19 evalue:1.5e-06 score:26.9 best_domain_score:26.3 name:2-Hacid_dh_C; db:Pfam-A.hmm|PF03807.17 evalue:3.1e-07 score:30.1 best_domain_score:29.1 name:F420_oxidored; db:Pfam-A.hmm|PF01450.19 evalue:1.7e-62 score:209.2 best_domain_score:208.8 name:IlvC; db:Pfam-A.hmm|PF07991.12 evalue:9.3e-69 score:229.4 best_domain_score:229.0 name:IlvN;
sprot_desc Ketol-acid reductoisomerase (NADP(+));
sprot_id sp|A9GW78|ILVC_SORC5;
sprot_target db:uniprot_sprot|sp|A9GW78|ILVC_SORC5 1 332 evalue:2.1e-116 qcov:98.80 identity:64.20;
tigrfam_acc TIGR00465;
tigrfam_desc ketol-acid reductoisomerase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name ilvC;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00465 evalue:4e-125 score:416.1 best_domain_score:415.9 name:TIGR00465;
4626 3910 CDS
ID metaerg.pl|13715
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083442022.1 29 235 evalue:1.3e-49 qcov:87.00 identity:54.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
pfam_acc PF12710; PF13419; PF00702; PF13242;
pfam_desc haloacid dehalogenase-like hydrolase; Haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id HAD; HAD_2; Hydrolase; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF12710.7 evalue:1.1e-09 score:38.2 best_domain_score:37.7 name:HAD; db:Pfam-A.hmm|PF13419.6 evalue:1.5e-24 score:86.3 best_domain_score:85.9 name:HAD_2; db:Pfam-A.hmm|PF00702.26 evalue:5.3e-11 score:42.4 best_domain_score:39.7 name:Hydrolase; db:Pfam-A.hmm|PF13242.6 evalue:2.9e-12 score:45.7 best_domain_score:44.6 name:Hydrolase_like;
sprot_desc hypothetical protein;
sprot_id sp|P9WPI8|Y2232_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WPI8|Y2232_MYCTO 24 235 evalue:3.0e-16 qcov:89.10 identity:32.40;
5348 4623 CDS
ID metaerg.pl|13716
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666247.1 4 238 evalue:1.7e-60 qcov:97.50 identity:57.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
pfam_acc PF05368;
pfam_desc NmrA-like family;
pfam_id NmrA;
pfam_target db:Pfam-A.hmm|PF05368.13 evalue:5.5e-06 score:25.3 best_domain_score:24.8 name:NmrA;
7149 5491 CDS
ID metaerg.pl|13717
allec_ids 5.4.99.2; 5.4.99.-;
allgo_ids GO:0016866; GO:0031419; GO:0005759; GO:0005739; GO:0046872; GO:0004494;
allko_ids K11942; K01848; K01849; K01847; K14447;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Mycobacteriaceae;g__Mycolicibacterium;s__Mycolicibacterium sp900240945;
genomedb_acc GCF_900240945.1;
genomedb_target db:genomedb|GCF_900240945.1|WP_101946985.1 8 551 evalue:1.3e-209 qcov:98.60 identity:66.10;
kegg_pathway_id 00280; 00640;
kegg_pathway_name Valine, leucine and isoleucine degradation; Propanoate metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
metacyc_pathway_id PWY-5672; PWY-5203; PWY-6109; PWY-5130; PWY0-43; PWY-5992; PWY-5377; PWY-5789; PWY-6005; PWY-112; PWY-6115; P108-PWY; PWY-5328; PWY-6008; RIBOKIN-PWY; PROPIONMET-PWY; PWY-5743;
metacyc_pathway_name ginsenosides biosynthesis;; soybean saponin I biosynthesis;; mangrove triterpenoid biosynthesis;; 2-oxobutanoate degradation I;; conversion of succinate to propanoate;; thalianol and derivatives biosynthesis;; α-amyrin biosynthesis;; 3-hydroxypropanoate/4-hydroxybutanate cycle;; marneral biosynthesis;; lupeol biosynthesis;; ; pyruvate fermentation to propanoate I;; superpathway of L-methionine salvage and degradation;; baruol biosynthesis;; ribose phosphorylation;; propanoyl CoA degradation I;; 3-hydroxypropanoate cycle;;
metacyc_pathway_type TRITERPENOID-SYN;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; 2-Oxobutanoate-Degradation; Super-Pathways;; SUCC-DEG;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; Autotrophic-CO2-Fixation;; TRITERPENOID-SYN;; TRITERPENOID-SYN;; ; Pyruvate-Propanoate-Fermentation;; METHIONINE-DEG; Super-Pathways;; TRITERPENOID-SYN;; Sugars-And-Polysaccharides-Degradation;; Propionate-Degradation;; Autotrophic-CO2-Fixation;;
pfam_acc PF01642;
pfam_desc Methylmalonyl-CoA mutase;
pfam_id MM_CoA_mutase;
pfam_target db:Pfam-A.hmm|PF01642.22 evalue:2.3e-210 score:698.8 best_domain_score:698.6 name:MM_CoA_mutase;
sprot_desc Probable methylmalonyl-CoA mutase, mitochondrial;
sprot_id sp|Q23381|MUTA_CAEEL;
sprot_target db:uniprot_sprot|sp|Q23381|MUTA_CAEEL 8 543 evalue:1.6e-129 qcov:97.10 identity:44.60;
tigrfam_acc TIGR00641;
tigrfam_desc methylmalonyl-CoA mutase N-terminal domain;
tigrfam_name acid_CoA_mut_N;
tigrfam_target db:TIGRFAMs.hmm|TIGR00641 evalue:1.6e-208 score:692.4 best_domain_score:692.2 name:TIGR00641;
7304 8023 CDS
ID metaerg.pl|13718
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666245.1 23 239 evalue:3.2e-27 qcov:90.80 identity:41.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
tm_num 1;
7304 8023 transmembrane_helix
ID metaerg.pl|13719
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
topology i7709-7777o;
8211 9674 CDS
ID metaerg.pl|13720
allec_ids 4.1.1.-;
allgo_ids GO:0016831; GO:0019752; GO:0030170; GO:0036469; GO:0006587;
allko_ids K01593;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669595.1 1 481 evalue:9.2e-199 qcov:98.80 identity:70.70;
kegg_pathway_id 00350; 00360; 00380; 00340;
kegg_pathway_name Tyrosine metabolism; Phenylalanine metabolism; Tryptophan metabolism; Histidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
metacyc_pathway_id PWY-181; PWY-5826; PWY-5855; PWY-5857; PWY-5113; PWY-5163; PWY-5114; UBISYN-PWY; PWY-5856; ALL-CHORISMATE-PWY;
metacyc_pathway_name photorespiration;; hypoglycin biosynthesis;; ubiquinol-7 biosynthesis (prokaryotic);; ubiquinol-10 biosynthesis (prokaryotic);; UDP-D-apiose biosynthesis (from UDP-D-glucuronate);; p-cumate degradation to 2-hydroxypentadienoate;; UDP-sugars interconversion;; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; ubiquinol-9 biosynthesis (prokaryotic);; superpathway of chorismate metabolism;;
metacyc_pathway_type Photosynthesis;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; UDP-Sugar-Biosynthesis;; AROMATIC-COMPOUNDS-DEGRADATION;; Interconversion; Super-Pathways; UDP-Sugar-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; Super-Pathways;;
pfam_acc PF00282;
pfam_desc Pyridoxal-dependent decarboxylase conserved domain;
pfam_id Pyridoxal_deC;
pfam_target db:Pfam-A.hmm|PF00282.19 evalue:3e-95 score:318.3 best_domain_score:318.1 name:Pyridoxal_deC;
sprot_desc Tryptophan decarboxylase 2;
sprot_id sp|Q7XHL3|TDC2_ORYSJ;
sprot_target db:uniprot_sprot|sp|Q7XHL3|TDC2_ORYSJ 1 485 evalue:8.4e-90 qcov:99.60 identity:36.10;
9871 9763 bac_5SrRNA
ID metaerg.pl|13721
Name bac_5SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 22.0742; 0.0809088; 0.14177; 22.9013; 0.6044;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_9414_length_9842_cov_9.12721
387 1355 CDS
ID metaerg.pl|13722
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 15.0336; ; 15.0336; ;
1498 2748 CDS
ID metaerg.pl|13723
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 15.0336; ; 15.0336; ;
2828 3811 CDS
ID metaerg.pl|13724
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 15.0336; ; 15.0336; ;
5460 4651 CDS
ID metaerg.pl|13725
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 15.0336; ; 15.0336; ;
sp YES;
4651 4746 signal_peptide
ID metaerg.pl|13726
Note TAT;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 15.0336; ; 15.0336; ;
5565 5801 CDS
ID metaerg.pl|13727
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 15.0336; ; 15.0336; ;
7597 5798 CDS
ID metaerg.pl|13728
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 15.0336; ; 15.0336; ;
pfam_acc PF04031;
pfam_desc Las1-like;
pfam_id Las1;
pfam_target db:Pfam-A.hmm|PF04031.13 evalue:1.5e-39 score:134.8 best_domain_score:133.8 name:Las1;
7940 8143 CDS
ID metaerg.pl|13729
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 15.0336; ; 15.0336; ;
8247 8516 CDS
ID metaerg.pl|13730
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 15.0336; ; 15.0336; ;
8482 8910 CDS
ID metaerg.pl|13731
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 15.0336; ; 15.0336; ;
>Feature NODE_9422_length_9835_cov_30.6058
2 105 bac_5SrRNA
ID metaerg.pl|13732
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0454311; 0.0606092; 43.2525; 0.155601; 43.5141;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
429 746 CDS
ID metaerg.pl|13733
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sediminis;
genomedb_acc GCF_003047295.1;
genomedb_target db:genomedb|GCF_003047295.1|WP_107773060.1 14 103 evalue:1.8e-14 qcov:85.70 identity:46.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0454311; 0.0606092; 43.2525; 0.155601; 43.5141;
691 984 CDS
ID metaerg.pl|13734
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0454311; 0.0606092; 43.2525; 0.155601; 43.5141;
1551 1324 CDS
ID metaerg.pl|13735
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0454311; 0.0606092; 43.2525; 0.155601; 43.5141;
tm_num 2;
1551 1324 transmembrane_helix
ID metaerg.pl|13736
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0454311; 0.0606092; 43.2525; 0.155601; 43.5141;
topology i1381-1449o1459-1527i;
2186 1563 CDS
ID metaerg.pl|13737
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0454311; 0.0606092; 43.2525; 0.155601; 43.5141;
2358 2137 CDS
ID metaerg.pl|13738
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0454311; 0.0606092; 43.2525; 0.155601; 43.5141;
6117 2719 CDS
ID metaerg.pl|13739
allgo_ids GO:0003997; GO:0005777; GO:0006635;
allko_ids K00249; K00232;
kegg_pathway_id 00410; 00592; 00071; 00640; 00280; 01040;
kegg_pathway_name beta-Alanine metabolism; alpha-Linolenic acid metabolism; Fatty acid metabolism; Propanoate metabolism; Valine, leucine and isoleucine degradation; Biosynthesis of unsaturated fatty acids;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0454311; 0.0606092; 43.2525; 0.155601; 43.5141;
pfam_acc PF01756; PF00441; PF02770; PF02771; PF00027; PF01575;
pfam_desc Acyl-CoA oxidase; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; Cyclic nucleotide-binding domain; MaoC like domain;
pfam_id ACOX; Acyl-CoA_dh_1; Acyl-CoA_dh_M; Acyl-CoA_dh_N; cNMP_binding; MaoC_dehydratas;
pfam_target db:Pfam-A.hmm|PF01756.19 evalue:1.7e-27 score:95.3 best_domain_score:94.3 name:ACOX; db:Pfam-A.hmm|PF00441.24 evalue:1.6e-15 score:56.8 best_domain_score:55.3 name:Acyl-CoA_dh_1; db:Pfam-A.hmm|PF02770.19 evalue:4.1e-16 score:58.2 best_domain_score:57.2 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:1e-11 score:44.7 best_domain_score:42.8 name:Acyl-CoA_dh_N; db:Pfam-A.hmm|PF00027.29 evalue:4.5e-18 score:64.4 best_domain_score:63.1 name:cNMP_binding; db:Pfam-A.hmm|PF01575.19 evalue:2.8e-07 score:29.4 best_domain_score:27.8 name:MaoC_dehydratas;
7495 6146 CDS
ID metaerg.pl|13740
allec_ids 2.1.1.-;
allgo_ids GO:0008168; GO:0071555; GO:0006633;
allko_ids K00568; K00599; K00574;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora;s__Micromonospora narathiwatensis;
genomedb_acc GCF_900089605.1;
genomedb_target db:genomedb|GCF_900089605.1|WP_091191887.1 5 431 evalue:6.5e-106 qcov:95.10 identity:50.50;
kegg_pathway_id 00350; 00130; 00340; 00380; 00150; 00450; 00626;
kegg_pathway_name Tyrosine metabolism; Ubiquinone biosynthesis; Histidine metabolism; Tryptophan metabolism; Androgen and estrogen metabolism; Selenoamino acid metabolism; Naphthalene and anthracene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0454311; 0.0606092; 43.2525; 0.155601; 43.5141;
metacyc_pathway_id PWY-5857; PWY-6303; PWY-5855; PWY-5209; PWY-6151; PWY-5856; PWY-6142; UBISYN-PWY; PWY-6154; PWY-6424; METH-ACETATE-PWY; METHIONINE-DEG1-PWY; PWY-5328; PWY-5773; PWY-6519; CO2FORM-PWY; PWY-5116; PWY-1581; PWY-5479; PWY-5987; PWY-6292; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6146; PWY-6427; PWY-6395; PWY-6575; PWY-6442; CODH-PWY; PWY-6477; PWY-5467; ALL-CHORISMATE-PWY; PWY-3542; PWY-6153; PWY-5041; PWY-4021; PWY-5975; PWY-5864; PWY-1061; PWY-5876; PWY-1422; PWY-5305; PWYG-321; PWY-6113; PWY-5729;
metacyc_pathway_name ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; ubiquinol-9 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; methanogenesis from acetate;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; xanthohumol biosynthesis;; biotin biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; gibberellin inactivation II (methylation);; gramine biosynthesis;; superpathway of chorismate metabolism;; choline biosynthesis II;; autoinducer AI-2 biosynthesis I;; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; vitamin E biosynthesis (tocopherols);; bixin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;;
metacyc_pathway_type Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Super-Pathways; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; METHANOGENESIS;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; LIGNAN-SYN;; QUINONE-SYN;; CYSTEINE-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Autotrophic-CO2-Fixation;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; Super-Pathways;; Choline-Biosynthesis;; Autoinducer-Biosynthesis;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;;
pfam_acc PF02353; PF08241; PF08242; PF13489; PF13649; PF13847; PF05175; PF01135;
pfam_desc Mycolic acid cyclopropane synthetase; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase domain; Methyltransferase small domain; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
pfam_id CMAS; Methyltransf_11; Methyltransf_12; Methyltransf_23; Methyltransf_25; Methyltransf_31; MTS; PCMT;
pfam_target db:Pfam-A.hmm|PF02353.20 evalue:3.7e-77 score:258.5 best_domain_score:258.2 name:CMAS; db:Pfam-A.hmm|PF08241.12 evalue:7e-12 score:45.1 best_domain_score:44.0 name:Methyltransf_11; db:Pfam-A.hmm|PF08242.12 evalue:3.6e-10 score:39.7 best_domain_score:38.8 name:Methyltransf_12; db:Pfam-A.hmm|PF13489.6 evalue:3.3e-11 score:42.5 best_domain_score:41.9 name:Methyltransf_23; db:Pfam-A.hmm|PF13649.6 evalue:1.4e-11 score:44.1 best_domain_score:42.9 name:Methyltransf_25; db:Pfam-A.hmm|PF13847.6 evalue:2e-08 score:33.4 best_domain_score:32.9 name:Methyltransf_31; db:Pfam-A.hmm|PF05175.14 evalue:4.3e-05 score:22.4 best_domain_score:21.7 name:MTS; db:Pfam-A.hmm|PF01135.19 evalue:8.8e-05 score:21.6 best_domain_score:21.0 name:PCMT;
sprot_desc Tuberculostearic acid methyltransferase UfaA1;
sprot_id sp|O53732|UFAA1_MYCTU;
sprot_target db:uniprot_sprot|sp|O53732|UFAA1_MYCTU 60 428 evalue:2.1e-63 qcov:82.20 identity:38.50;
7726 9156 CDS
ID metaerg.pl|13741
genomedb_OC d__Bacteria;p__Acidobacteriota;c__Mor1;o__Gp22-AA2;f__AA152;g__AA152;s__AA152 sp003222305;
genomedb_acc GCA_003222305.1;
genomedb_target db:genomedb|GCA_003222305.1|PYQ10856.1 46 476 evalue:1.6e-115 qcov:90.50 identity:50.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0454311; 0.0606092; 43.2525; 0.155601; 43.5141;
pfam_acc PF00027; PF12147;
pfam_desc Cyclic nucleotide-binding domain; Putative methyltransferase;
pfam_id cNMP_binding; Methyltransf_20;
pfam_target db:Pfam-A.hmm|PF00027.29 evalue:8.2e-15 score:53.9 best_domain_score:53.0 name:cNMP_binding; db:Pfam-A.hmm|PF12147.8 evalue:1.3e-13 score:50.0 best_domain_score:48.9 name:Methyltransf_20;
9835 9182 CDS
ID metaerg.pl|13742
allec_ids 3.1.1.5;
allgo_ids GO:0006629; GO:0005783; GO:0005789; GO:0016021; GO:0052689; GO:0004622; GO:0001525; GO:0009887; GO:0016042; GO:0046470;
allko_ids K14676;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Paraglaciecola;s__Paraglaciecola arctica;
genomedb_acc GCF_000314995.1;
genomedb_target db:genomedb|GCF_000314995.1|WP_007619278.1 1 201 evalue:3.1e-37 qcov:92.60 identity:39.30;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0454311; 0.0606092; 43.2525; 0.155601; 43.5141;
pfam_acc PF01734;
pfam_desc Patatin-like phospholipase;
pfam_id Patatin;
pfam_target db:Pfam-A.hmm|PF01734.22 evalue:3e-09 score:36.6 best_domain_score:35.7 name:Patatin;
sprot_desc Neuropathy target esterase;
sprot_id sp|Q3TRM4|PLPL6_MOUSE;
sprot_target db:uniprot_sprot|sp|Q3TRM4|PLPL6_MOUSE 1 202 evalue:1.0e-18 qcov:93.10 identity:29.90;
>Feature NODE_9538_length_9758_cov_15.0609
757 1 bac_16SrRNA
ID metaerg.pl|13743
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|GQ441337.1.1427 1 754 evalue:0.0 qcov:99 identity:98.143;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Caulobacterales;Hyphomonadaceae;Oceanicaulis;
1904 1473 CDS
ID metaerg.pl|13744
allec_ids 1.1.1.205;
allgo_ids GO:0003938; GO:0046872; GO:0000166; GO:0006177; GO:0006183;
allko_ids K01697; K00031; K02000; K11527; K05847; K00088; K00970; K00974; K02806;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis;s__Oceanicaulis sp003046365;
genomedb_acc GCF_003046365.1;
genomedb_target db:genomedb|GCF_003046365.1|WP_107711107.1 1 143 evalue:1.6e-37 qcov:100.00 identity:59.40;
kegg_pathway_id 00983; 00720; 00271; 00480; 00020; 00230; 00260; 02010; 02060; 00450;
kegg_pathway_name Drug metabolism - other enzymes; Reductive carboxylate cycle (CO2 fixation); Methionine metabolism; Glutathione metabolism; Citrate cycle (TCA cycle); Purine metabolism; Glycine, serine and threonine metabolism; ABC transporters - General; Phosphotransferase system (PTS); Selenoamino acid metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
metacyc_pathway_id PWY-841; PWY-6353; PRPP-PWY; PWY-5695; PWY-5044; P121-PWY; PWY-6125; URSIN-PWY; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis I;; purine nucleotides degradation II (aerobic);; superpathway of histidine, purine, and pyrimidine biosynthesis;; inosine 5'-phosphate degradation;; purine nucleotides degradation I (plants);; adenine and adenosine salvage I;; superpathway of guanosine nucleotides de novo biosynthesis II;; ureide biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Degradation; Super-Pathways;; Super-Pathways;; Purine-Degradation;; Purine-Degradation; Super-Pathways;; Adenine-Adenosine-Salvage;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00571;
pfam_desc CBS domain;
pfam_id CBS;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:3.9e-19 score:68.1 best_domain_score:37.5 name:CBS;
sprot_desc Inosine-5'-monophosphate dehydrogenase;
sprot_id sp|O67820|IMDH_AQUAE;
sprot_target db:uniprot_sprot|sp|O67820|IMDH_AQUAE 15 125 evalue:1.0e-06 qcov:77.60 identity:29.20;
1995 3299 CDS
ID metaerg.pl|13745
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis;s__Oceanicaulis sp003122085;
genomedb_acc GCF_003122085.1;
genomedb_target db:genomedb|GCF_003122085.1|WP_109252700.1 3 422 evalue:2.0e-96 qcov:96.80 identity:52.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
pfam_acc PF09925;
pfam_desc Predicted membrane protein (DUF2157);
pfam_id DUF2157;
pfam_target db:Pfam-A.hmm|PF09925.9 evalue:1.4e-28 score:98.8 best_domain_score:98.8 name:DUF2157;
tm_num 13;
1995 3299 transmembrane_helix
ID metaerg.pl|13746
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
topology o2121-2189i2208-2276o2304-2372i2391-2459o2502-2570i2589-2657o2670-2738i2757-2825o2853-2921i2955-3008o3021-3089i3102-3170o3183-3251i;
3296 3892 CDS
ID metaerg.pl|13747
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis;s__Oceanicaulis sp003122085;
genomedb_acc GCF_003122085.1;
genomedb_target db:genomedb|GCF_003122085.1|WP_109253087.1 1 198 evalue:1.9e-41 qcov:100.00 identity:51.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
pfam_acc PF14345;
pfam_desc GDYXXLXY protein;
pfam_id GDYXXLXY;
pfam_target db:Pfam-A.hmm|PF14345.6 evalue:1.3e-21 score:76.2 best_domain_score:75.9 name:GDYXXLXY;
sp YES;
tm_num 1;
3296 3373 signal_peptide
ID metaerg.pl|13748
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
3296 3892 transmembrane_helix
ID metaerg.pl|13749
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
topology i3308-3376o;
4569 3889 CDS
ID metaerg.pl|13750
allgo_ids GO:0004252; GO:0016021;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis;s__Oceanicaulis alexandrii;
genomedb_acc GCF_000420265.1;
genomedb_target db:genomedb|GCF_000420265.1|WP_022701891.1 5 221 evalue:1.7e-54 qcov:96.00 identity:55.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
pfam_acc PF01694;
pfam_desc Rhomboid family;
pfam_id Rhomboid;
pfam_target db:Pfam-A.hmm|PF01694.22 evalue:2.6e-15 score:55.9 best_domain_score:55.9 name:Rhomboid;
sp YES;
tm_num 6;
3889 4011 signal_peptide
ID metaerg.pl|13751
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
4569 3889 transmembrane_helix
ID metaerg.pl|13752
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
topology i3946-4014o4150-4218i4237-4305o4333-4401i4420-4476o4489-4557i;
4675 5157 CDS
ID metaerg.pl|13753
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis;s__Oceanicaulis sp001657295;
genomedb_acc GCA_001657295.1;
genomedb_target db:genomedb|GCA_001657295.1|LYSW01000006.1_6 1 160 evalue:1.0e-29 qcov:100.00 identity:58.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
sp YES;
4675 4746 signal_peptide
ID metaerg.pl|13754
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
5150 6142 CDS
ID metaerg.pl|13755
allgo_ids GO:0030288; GO:0003677; GO:0007155;
allko_ids K13586;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis;s__Oceanicaulis alexandrii;
genomedb_acc GCF_000420265.1;
genomedb_target db:genomedb|GCF_000420265.1|WP_022701889.1 4 330 evalue:2.6e-152 qcov:99.10 identity:84.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
pfam_acc PF03783;
pfam_desc Curli production assembly/transport component CsgG;
pfam_id CsgG;
pfam_target db:Pfam-A.hmm|PF03783.14 evalue:6e-21 score:73.9 best_domain_score:73.5 name:CsgG;
sp YES;
sprot_desc Putative transcription activator protein HfaB;
sprot_id sp|P27343|HFAB_CAUVC;
sprot_target db:uniprot_sprot|sp|P27343|HFAB_CAUVC 7 329 evalue:2.6e-82 qcov:97.90 identity:51.40;
5150 5206 lipoprotein_signal_peptide
ID metaerg.pl|13756
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
6102 7295 CDS
ID metaerg.pl|13757
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis;s__Oceanicaulis sp001657295;
genomedb_acc GCA_001657295.1;
genomedb_target db:genomedb|GCA_001657295.1|LYSW01000006.1_8 41 395 evalue:2.2e-81 qcov:89.40 identity:52.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
7452 8624 CDS
ID metaerg.pl|13758
allec_ids 1.3.1.-;
allgo_ids GO:0016491; GO:0055114; GO:0006629;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Maricaulis;s__Maricaulis maris;
genomedb_acc GCF_000014745.1;
genomedb_target db:genomedb|GCF_000014745.1|WP_011644077.1 1 389 evalue:3.5e-164 qcov:99.70 identity:73.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
metacyc_pathway_id PWY-5063; PWY-5064; PWY-5863; PWY1A0-6325; PWY-6088; PWY-5393; HCAMHPDEG-PWY; PWY-3481; PWY-5972; PWY-5466; PWY-3461; PWY-5367; PWY-5729; PWY5F9-3233;
metacyc_pathway_name phytyl diphosphate biosynthesis;; chlorophyll a biosynthesis II;; superpathway of phylloquinol biosynthesis;; actinorhodin biosynthesis;; 3-chlorobenzoate degradation I (via chlorocatechol);; raspberry ketone biosynthesis;; 3-phenylpropanoate and 3-(3-hydroxyphenyl)propanoate degradation to 2-hydroxypentadienoate;; superpathway of L-phenylalanine and L-tyrosine biosynthesis;; stearate biosynthesis I (animals and fungi);; matairesinol biosynthesis;; L-tyrosine biosynthesis II;; petroselinate biosynthesis;; vestitol and sativan biosynthesis;; phthalate degradation (aerobic);;
metacyc_pathway_type Phytyl-Diphosphate-Biosynthesis;; Chlorophyll-a-Biosynthesis;; Phylloquinone-Biosynthesis; Super-Pathways;; Antibiotic-Biosynthesis;; 3-Chlorobenzoate-Degradation;; POLYKETIDE-SYN;; Phenolic-Compounds-Degradation;; Amino-Acid-Biosynthesis; Super-Pathways;; Stearate-Biosynthesis;; LIGNAN-SYN;; TYROSINE-SYN;; Unsaturated-Fatty-Acids-Biosynthesis;; ISOFLAVONOID-SYN;; AROMATIC-COMPOUNDS-DEGRADATION;;
pfam_acc PF03435;
pfam_desc Saccharopine dehydrogenase NADP binding domain;
pfam_id Sacchrp_dh_NADP;
pfam_target db:Pfam-A.hmm|PF03435.18 evalue:1.2e-14 score:53.9 best_domain_score:52.9 name:Sacchrp_dh_NADP;
sprot_desc Trans-acting enoyl reductase;
sprot_id sp|Q7TXK2|TAER_MYCBO;
sprot_target db:uniprot_sprot|sp|Q7TXK2|TAER_MYCBO 2 380 evalue:3.6e-67 qcov:97.20 identity:39.80;
8744 9550 CDS
ID metaerg.pl|13759
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Caulobacterales;f__Maricaulaceae;g__Oceanicaulis;s__Oceanicaulis sp000152745;
genomedb_acc GCF_000152745.1;
genomedb_target db:genomedb|GCF_000152745.1|WP_009801633.1 10 265 evalue:9.0e-55 qcov:95.50 identity:45.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 42.6172; 0.778206; 26.0831; 14.9923; 0.763634;
>Feature NODE_9670_length_9671_cov_6.26726
1 310 arc_23SrRNA
ID metaerg.pl|13760
Name arc_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AOHV01000046.33520.36428 1 310 evalue:3.50e-157 qcov:100 identity:99.032;
rRNA_taxon Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halococcaceae;Halalkalicoccus;
435 544 arc_5SrRNA
ID metaerg.pl|13761
Name arc_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
776 851 tRNA
ID metaerg.pl|13762
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
name tRNA_Cys_gca;
2105 1113 CDS
ID metaerg.pl|13763
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Haloferacaceae;g__Haloferax;s__Haloferax sp001469875;
genomedb_acc GCF_001469875.2;
genomedb_target db:genomedb|GCF_001469875.2|WP_058568691.1 8 319 evalue:6.5e-79 qcov:94.50 identity:48.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
pfam_acc PF12974;
pfam_desc ABC transporter, phosphonate, periplasmic substrate-binding protein;
pfam_id Phosphonate-bd;
pfam_target db:Pfam-A.hmm|PF12974.7 evalue:4.7e-50 score:169.7 best_domain_score:169.4 name:Phosphonate-bd;
sp YES;
1113 1223 signal_peptide
ID metaerg.pl|13764
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
2623 2198 CDS
ID metaerg.pl|13765
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380280.1 1 140 evalue:1.6e-50 qcov:99.30 identity:73.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
pfam_acc PF00582;
pfam_desc Universal stress protein family;
pfam_id Usp;
pfam_target db:Pfam-A.hmm|PF00582.26 evalue:1.2e-06 score:28.3 best_domain_score:27.8 name:Usp;
3125 3052 tRNA
ID metaerg.pl|13766
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
name tRNA_Lys_ctt;
3210 4451 CDS
ID metaerg.pl|13767
allec_ids 3.-.-.-; 3.4.-.-;
allgo_ids GO:0016787; GO:0046872;
allko_ids K01438;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus jeotgali;
genomedb_acc GCF_000196895.1;
genomedb_target db:genomedb|GCF_000196895.1|WP_008419202.1 1 412 evalue:8.7e-174 qcov:99.80 identity:75.50;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
pfam_acc PF07687; PF01546; PF04389;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40; Peptidase family M28;
pfam_id M20_dimer; Peptidase_M20; Peptidase_M28;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:6.8e-09 score:34.9 best_domain_score:32.3 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:1.1e-32 score:112.7 best_domain_score:111.8 name:Peptidase_M20; db:Pfam-A.hmm|PF04389.17 evalue:9.2e-05 score:21.4 best_domain_score:15.7 name:Peptidase_M28;
sprot_desc Uncharacterized metallohydrolase YodQ;
sprot_id sp|O34984|YODQ_BACSU;
sprot_target db:uniprot_sprot|sp|O34984|YODQ_BACSU 12 389 evalue:7.2e-50 qcov:91.50 identity:32.50;
tigrfam_acc TIGR01910;
tigrfam_desc peptidase, ArgE/DapE family;
tigrfam_mainrole Protein fate;
tigrfam_name DapE-ArgE;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01910 evalue:2.2e-73 score:246.8 best_domain_score:246.4 name:TIGR01910;
5097 4432 CDS
ID metaerg.pl|13768
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380284.1 1 220 evalue:9.0e-109 qcov:99.50 identity:90.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
5541 5849 CDS
ID metaerg.pl|13769
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380286.1 1 102 evalue:2.4e-48 qcov:100.00 identity:87.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
5940 7682 CDS
ID metaerg.pl|13770
allec_ids 1.7.7.1;
allgo_ids GO:0016491; GO:0020037; GO:0051536; GO:0055114; GO:0051539; GO:0048307; GO:0046872; GO:0042128;
allko_ids K00441; K11181; K00392; K00362; K00363; K11180; K00381; K00366;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380288.1 1 580 evalue:0.0e+00 qcov:100.00 identity:89.70;
kegg_pathway_id 00790; 00920; 00910; 00450; 00633;
kegg_pathway_name Folate biosynthesis; Sulfur metabolism; Nitrogen metabolism; Selenoamino acid metabolism; Trinitrotoluene degradation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
metacyc_pathway_id PWY490-3; PWY-381;
metacyc_pathway_name nitrate reduction VI (assimilatory);; nitrate reduction II (assimilatory);;
metacyc_pathway_type Nitrate-Reduction;; Nitrate-Reduction;;
pfam_acc PF01077; PF03460;
pfam_desc Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain;
pfam_id NIR_SIR; NIR_SIR_ferr;
pfam_target db:Pfam-A.hmm|PF01077.22 evalue:7.1e-47 score:158.1 best_domain_score:126.1 name:NIR_SIR; db:Pfam-A.hmm|PF03460.17 evalue:3.1e-39 score:131.9 best_domain_score:71.5 name:NIR_SIR_ferr;
sprot_desc Assimilatory ferredoxin-dependent nitrite reductase;
sprot_id sp|I3R637|NASD_HALMT;
sprot_target db:uniprot_sprot|sp|I3R637|NASD_HALMT 1 579 evalue:6.3e-201 qcov:99.80 identity:55.80;
7742 8023 CDS
ID metaerg.pl|13771
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380289.1 1 93 evalue:1.8e-39 qcov:100.00 identity:92.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
8074 8661 CDS
ID metaerg.pl|13772
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380291.1 1 195 evalue:2.1e-77 qcov:100.00 identity:79.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
pfam_acc PF04367;
pfam_desc Protein of unknown function (DUF502);
pfam_id DUF502;
pfam_target db:Pfam-A.hmm|PF04367.13 evalue:8.2e-17 score:60.3 best_domain_score:59.4 name:DUF502;
tm_num 2;
8074 8661 transmembrane_helix
ID metaerg.pl|13773
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
topology i8107-8175o8218-8286i;
9470 8658 CDS
ID metaerg.pl|13774
allgo_ids GO:0003824; GO:0046872;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380294.1 1 270 evalue:3.6e-128 qcov:100.00 identity:88.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
pfam_acc PF01557;
pfam_desc Fumarylacetoacetate (FAA) hydrolase family;
pfam_id FAA_hydrolase;
pfam_target db:Pfam-A.hmm|PF01557.18 evalue:3.3e-47 score:160.2 best_domain_score:159.9 name:FAA_hydrolase;
sprot_desc hypothetical protein;
sprot_id sp|O28058|Y2225_ARCFU;
sprot_target db:uniprot_sprot|sp|O28058|Y2225_ARCFU 41 263 evalue:2.9e-31 qcov:82.60 identity:41.50;
9670 9467 CDS
ID metaerg.pl|13775
allko_ids K00971;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halalkalicoccaceae;g__Halalkalicoccus;s__Halalkalicoccus paucihalophilus;
genomedb_acc GCF_001593955.1;
genomedb_target db:genomedb|GCF_001593955.1|WP_066380296.1 1 67 evalue:4.3e-30 qcov:100.00 identity:92.50;
kegg_pathway_id 00051;
kegg_pathway_name Fructose and mannose metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0153345; 9.99632; ; ; 10.0117;
pfam_acc PF07883;
pfam_desc Cupin domain;
pfam_id Cupin_2;
pfam_target db:Pfam-A.hmm|PF07883.11 evalue:5.1e-11 score:41.4 best_domain_score:41.1 name:Cupin_2;
>Feature NODE_9824_length_9576_cov_42.1984
854 2642 euk_18SrRNA
ID metaerg.pl|13776
Name euk_18SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KM020043.1.1767 20 1780 evalue:0.0 qcov:98 identity:94.161;
rRNA_taxon Eukaryota;Archaeplastida;Chloroplastida;Chlorophyta;
977 1210 CDS
ID metaerg.pl|13777
genomedb_OC d__Eukaryota;no__Opisthokonta;p__Basidiomycota;c__Agaricomycetes;o__Agaricales;f__Agaricaceae;g__Agaricus;s__Agaricus bisporus;;
genomedb_acc GCF_000300555.1;
genomedb_target db:genomedb|GCF_000300555.1|XP_007335664.1 18 77 evalue:6.3e-09 qcov:77.90 identity:57.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
3739 3554 CDS
ID metaerg.pl|13778
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
4095 3826 CDS
ID metaerg.pl|13779
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
4664 4404 CDS
ID metaerg.pl|13780
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
5437 4877 CDS
ID metaerg.pl|13781
allgo_ids GO:0005515;
allko_ids K01802; K09667; K08884; K05864; K09571; K01768;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Synechococcales;f__Prochlorotrichaceae;g__Prochlorothrix;s__Prochlorothrix hollandica;
genomedb_acc GCF_000332315.1;
genomedb_target db:genomedb|GCF_000332315.1|WP_081599222.1 11 179 evalue:1.4e-38 qcov:90.90 identity:50.90;
kegg_pathway_id 05012; 01030; 00230; 04020;
kegg_pathway_name Parkinson's disease; Glycan structures - biosynthesis 1; Purine metabolism; Calcium signaling pathway;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
pfam_acc PF00515; PF13374; PF13414; PF13424; PF13428; PF13432; PF07719; PF13176; PF13181; PF17874;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat; TPR repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; Tetratricopeptide repeat; MalT-like TPR region;
pfam_id TPR_1; TPR_10; TPR_11; TPR_12; TPR_14; TPR_16; TPR_2; TPR_7; TPR_8; TPR_MalT;
pfam_target db:Pfam-A.hmm|PF00515.28 evalue:8e-17 score:59.5 best_domain_score:28.1 name:TPR_1; db:Pfam-A.hmm|PF13374.6 evalue:1.5e-40 score:135.2 best_domain_score:47.6 name:TPR_10; db:Pfam-A.hmm|PF13414.6 evalue:3.9e-07 score:28.9 best_domain_score:8.7 name:TPR_11; db:Pfam-A.hmm|PF13424.6 evalue:5.2e-47 score:157.3 best_domain_score:69.8 name:TPR_12; db:Pfam-A.hmm|PF13428.6 evalue:1.3e-06 score:28.0 best_domain_score:12.9 name:TPR_14; db:Pfam-A.hmm|PF13432.6 evalue:1.4e-08 score:34.5 best_domain_score:18.6 name:TPR_16; db:Pfam-A.hmm|PF07719.17 evalue:1.2e-11 score:43.0 best_domain_score:18.1 name:TPR_2; db:Pfam-A.hmm|PF13176.6 evalue:5.6e-19 score:66.0 best_domain_score:24.2 name:TPR_7; db:Pfam-A.hmm|PF13181.6 evalue:1e-09 score:37.1 best_domain_score:19.8 name:TPR_8; db:Pfam-A.hmm|PF17874.1 evalue:2.6e-07 score:29.6 best_domain_score:28.8 name:TPR_MalT;
6249 5770 CDS
ID metaerg.pl|13782
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
sp YES;
5770 5859 signal_peptide
ID metaerg.pl|13783
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
7287 7093 CDS
ID metaerg.pl|13784
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
7631 7341 CDS
ID metaerg.pl|13785
allgo_ids GO:0005524;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
pfam_acc PF00004;
pfam_desc ATPase family associated with various cellular activities (AAA);
pfam_id AAA;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:0.00013 score:21.6 best_domain_score:21.3 name:AAA;
8196 7828 CDS
ID metaerg.pl|13786
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
8429 8668 CDS
ID metaerg.pl|13787
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
9055 8822 CDS
ID metaerg.pl|13788
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
tm_num 1;
9055 8822 transmembrane_helix
ID metaerg.pl|13789
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
topology i8855-8923o;
9576 9109 CDS
ID metaerg.pl|13790
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 503.138; 0.463823; 2.50308; 499; 1.17123;
>Feature NODE_9965_length_9506_cov_6.34631
2 505 CDS
ID metaerg.pl|13791
allgo_ids GO:0003700; GO:0006355; GO:0003677;
allko_ids K00825; K07979;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__Oleiagrimonas;s__Oleiagrimonas sp003267965;
genomedb_acc GCA_003267965.1;
genomedb_target db:genomedb|GCA_003267965.1|RAP57116.1 42 164 evalue:1.3e-27 qcov:73.70 identity:56.10;
kegg_pathway_id 00310; 00300;
kegg_pathway_name Lysine degradation; Lysine biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
pfam_acc PF00392;
pfam_desc Bacterial regulatory proteins, gntR family;
pfam_id GntR;
pfam_target db:Pfam-A.hmm|PF00392.21 evalue:6.9e-19 score:66.5 best_domain_score:66.1 name:GntR;
sprot_desc HTH-type transcriptional repressor YtrA;
sprot_id sp|O34712|YTRA_BACSU;
sprot_target db:uniprot_sprot|sp|O34712|YTRA_BACSU 42 161 evalue:5.4e-12 qcov:71.90 identity:34.40;
951 874 tRNA
ID metaerg.pl|13792
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
name tRNA_Gln_ctg;
958 1374 CDS
ID metaerg.pl|13793
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pararheinheimera;s__Pararheinheimera sp001669775;
genomedb_acc GCF_001669775.1;
genomedb_target db:genomedb|GCF_001669775.1|WP_082971937.1 1 137 evalue:1.4e-19 qcov:99.30 identity:36.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
1374 2633 CDS
ID metaerg.pl|13794
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
tm_num 12;
1374 2633 transmembrane_helix
ID metaerg.pl|13795
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
topology i1407-1475o1488-1556i1575-1643o1671-1739i1752-1805o1818-1886i1989-2057o2100-2168i2253-2321o2349-2417i2442-2495o2523-2576i;
4593 2890 CDS
ID metaerg.pl|13796
allec_ids 6.1.1.18;
allgo_ids GO:0004812; GO:0005524; GO:0043039; GO:0005829; GO:0004819; GO:0006425; GO:0006424;
allko_ids K01886;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ectothiorhodospirales;f__Ectothiorhodospiraceae;g__Ectothiorhodospira;s__Ectothiorhodospira sp001632845;
genomedb_acc GCF_001632845.1;
genomedb_target db:genomedb|GCF_001632845.1|WP_063465671.1 3 560 evalue:5.4e-275 qcov:98.40 identity:79.70;
kegg_pathway_id 00251; 00970;
kegg_pathway_name Glutamate metabolism; Aminoacyl-tRNA biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00749; PF03950;
pfam_desc tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain;
pfam_id tRNA-synt_1c; tRNA-synt_1c_C;
pfam_target db:Pfam-A.hmm|PF00749.21 evalue:1.9e-98 score:328.4 best_domain_score:328.1 name:tRNA-synt_1c; db:Pfam-A.hmm|PF03950.18 evalue:1.3e-62 score:210.0 best_domain_score:209.4 name:tRNA-synt_1c_C;
sprot_desc Glutamine--tRNA ligase;
sprot_id sp|Q89KR6|SYQ_BRADU;
sprot_target db:uniprot_sprot|sp|Q89KR6|SYQ_BRADU 4 555 evalue:2.8e-201 qcov:97.40 identity:60.00;
tigrfam_acc TIGR00440;
tigrfam_desc glutamine--tRNA ligase;
tigrfam_mainrole Protein synthesis;
tigrfam_name glnS;
tigrfam_sub1role tRNA aminoacylation;
tigrfam_target db:TIGRFAMs.hmm|TIGR00440 evalue:1.6e-212 score:706.2 best_domain_score:706.0 name:TIGR00440;
4788 6059 CDS
ID metaerg.pl|13797
allgo_ids GO:0015293; GO:0016021; GO:0005886; GO:0005283; GO:0015108; GO:0042802; GO:0015183; GO:0046872; GO:0015810; GO:1902476; GO:0140009; GO:0070778; GO:0015813; GO:0070207;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724280.1 1 419 evalue:3.4e-173 qcov:99.10 identity:79.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
pfam_acc PF00375;
pfam_desc Sodium:dicarboxylate symporter family;
pfam_id SDF;
pfam_target db:Pfam-A.hmm|PF00375.18 evalue:1.3e-128 score:428.6 best_domain_score:428.4 name:SDF;
sprot_desc Glutamate transporter homolog;
sprot_id sp|O59010|GLT_PYRHO;
sprot_target db:uniprot_sprot|sp|O59010|GLT_PYRHO 52 416 evalue:4.8e-57 qcov:86.30 identity:40.30;
tm_num 10;
4788 6059 transmembrane_helix
ID metaerg.pl|13798
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
topology i4821-4889o4932-5000i5058-5126o5253-5306i5367-5435o5478-5546i5580-5639o5724-5777i5796-5855o5865-5933i;
7093 6134 CDS
ID metaerg.pl|13799
allgo_ids GO:0005524; GO:0046872;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Ga0077536;f__Ga0077536;g__Ga0077536;s__Ga0077536 sp001464935;
genomedb_acc GCA_001464935.1;
genomedb_target db:genomedb|GCA_001464935.1|LNEL01000034.1_38 5 294 evalue:1.9e-91 qcov:90.90 identity:56.60;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
pfam_acc PF02655; PF14397; PF02955; PF08443;
pfam_desc ATP-grasp domain; Sugar-transfer associated ATP-grasp; Prokaryotic glutathione synthetase, ATP-grasp domain; RimK-like ATP-grasp domain;
pfam_id ATP-grasp_3; ATPgrasp_ST; GSH-S_ATP; RimK;
pfam_target db:Pfam-A.hmm|PF02655.14 evalue:9.9e-11 score:41.2 best_domain_score:22.4 name:ATP-grasp_3; db:Pfam-A.hmm|PF14397.6 evalue:6.4e-94 score:313.7 best_domain_score:313.4 name:ATPgrasp_ST; db:Pfam-A.hmm|PF02955.16 evalue:1.8e-06 score:26.7 best_domain_score:14.2 name:GSH-S_ATP; db:Pfam-A.hmm|PF08443.11 evalue:2.4e-14 score:52.6 best_domain_score:24.7 name:RimK;
tigrfam_acc TIGR02291;
tigrfam_desc alpha-L-glutamate ligase homolog;
tigrfam_name rimK_rel_E_lig;
tigrfam_target db:TIGRFAMs.hmm|TIGR02291 evalue:9.8e-120 score:398.5 best_domain_score:398.1 name:TIGR02291;
8619 7090 CDS
ID metaerg.pl|13800
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Woeseiales;f__Woeseiaceae;g__UBA1844;s__UBA1844 sp002338615;
genomedb_acc GCA_002338615.1;
genomedb_target db:genomedb|GCA_002338615.1|DDIS01000213.1_9 5 504 evalue:7.3e-122 qcov:98.20 identity:48.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
pfam_acc PF14402; PF14400;
pfam_desc 7 transmembrane helices usually fused to an inactive transglutaminase; Inactive transglutaminase fused to 7 transmembrane helices;
pfam_id 7TM_transglut; Transglut_i_TM;
pfam_target db:Pfam-A.hmm|PF14402.6 evalue:5.1e-92 score:307.1 best_domain_score:306.7 name:7TM_transglut; db:Pfam-A.hmm|PF14400.6 evalue:3e-43 score:146.9 best_domain_score:146.5 name:Transglut_i_TM;
sp YES;
tm_num 8;
7090 7155 signal_peptide
ID metaerg.pl|13801
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
8619 7090 transmembrane_helix
ID metaerg.pl|13802
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
topology i7108-7161o8005-8073i8086-8139o8149-8217i8236-8304o8314-8382i8419-8487o8500-8568i;
9140 8616 CDS
ID metaerg.pl|13803
genomedb_OC d__Bacteria;p__Desulfobacterota_A;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfonatronaceae;g__Desulfonatronum;s__Desulfonatronum thiosulfatophilum;
genomedb_acc GCF_900104215.1;
genomedb_target db:genomedb|GCF_900104215.1|WP_092121426.1 5 168 evalue:1.0e-35 qcov:94.30 identity:49.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
pfam_acc PF05618;
pfam_desc Putative ATP-dependant zinc protease;
pfam_id Zn_protease;
pfam_target db:Pfam-A.hmm|PF05618.11 evalue:1.7e-39 score:134.1 best_domain_score:133.8 name:Zn_protease;
sp YES;
8616 8678 signal_peptide
ID metaerg.pl|13804
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
9482 9370 bac_5SrRNA
ID metaerg.pl|13805
Name bac_5SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.1201; 0.0782386; 0.213232; 10.7497; 0.338179;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_10094_length_9434_cov_8.52362
211 2 CDS
ID metaerg.pl|13806
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
1243 734 CDS
ID metaerg.pl|13807
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
2235 1825 CDS
ID metaerg.pl|13808
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
sp YES;
tm_num 2;
1825 1896 signal_peptide
ID metaerg.pl|13809
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
2235 1825 transmembrane_helix
ID metaerg.pl|13810
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
topology i2023-2076o2119-2187i;
2991 2431 CDS
ID metaerg.pl|13811
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
4354 2975 CDS
ID metaerg.pl|13812
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
tm_num 1;
4354 2975 transmembrane_helix
ID metaerg.pl|13813
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
topology o4154-4222i;
5187 4720 CDS
ID metaerg.pl|13814
allgo_ids GO:0016787;
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Trebouxiophyceae;o__Chlorellales;f__Chlorellaceae;g__Auxenochlorella;s__Auxenochlorella protothecoides;;
genomedb_acc GCF_000733215.1;
genomedb_target db:genomedb|GCF_000733215.1|XP_011399230.1 1 117 evalue:2.1e-11 qcov:75.50 identity:40.50;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
pfam_acc PF00149;
pfam_desc Calcineurin-like phosphoesterase;
pfam_id Metallophos;
pfam_target db:Pfam-A.hmm|PF00149.28 evalue:9.6e-10 score:38.5 best_domain_score:38.2 name:Metallophos;
5827 6381 CDS
ID metaerg.pl|13815
allgo_ids GO:0003723; GO:0003743; GO:0005737; GO:0006413;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
pfam_acc PF01652;
pfam_desc Eukaryotic initiation factor 4E;
pfam_id IF4E;
pfam_target db:Pfam-A.hmm|PF01652.18 evalue:9e-10 score:37.8 best_domain_score:37.4 name:IF4E;
7055 7336 CDS
ID metaerg.pl|13816
allgo_ids GO:0003723; GO:0003743; GO:0005737; GO:0006413; GO:0016281; GO:0000340; GO:0034059;
allko_ids K03259;
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Trebouxiophyceae;o__Chlorellales;f__Chlorellaceae;g__Auxenochlorella;s__Auxenochlorella protothecoides;;
genomedb_acc GCF_000733215.1;
genomedb_target db:genomedb|GCF_000733215.1|XP_011396038.1 9 81 evalue:1.0e-13 qcov:78.50 identity:54.10;
kegg_pathway_id 04150;
kegg_pathway_name mTOR signaling pathway;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
pfam_acc PF01652;
pfam_desc Eukaryotic initiation factor 4E;
pfam_id IF4E;
pfam_target db:Pfam-A.hmm|PF01652.18 evalue:3.3e-14 score:52.2 best_domain_score:51.9 name:IF4E;
sprot_desc Eukaryotic translation initiation factor 4E-1;
sprot_id sp|O81481|IF4E1_MAIZE;
sprot_target db:uniprot_sprot|sp|O81481|IF4E1_MAIZE 9 81 evalue:1.8e-17 qcov:78.50 identity:59.50;
7676 7873 CDS
ID metaerg.pl|13817
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
sp YES;
tm_num 1;
7676 7750 lipoprotein_signal_peptide
ID metaerg.pl|13818
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
7676 7873 transmembrane_helix
ID metaerg.pl|13819
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
topology i7721-7789o;
8037 8267 CDS
ID metaerg.pl|13820
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
9040 8519 CDS
ID metaerg.pl|13821
allgo_ids GO:0003723;
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Chlorophyceae;o__Chlamydomonadales;f__Volvocaceae;g__Volvox;s__Volvox carteri;;
genomedb_acc GCF_000143455.1;
genomedb_target db:genomedb|GCF_000143455.1|XP_002948091.1 6 169 evalue:4.1e-16 qcov:94.80 identity:37.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.8354; ; ; 14.8354; ;
pfam_acc PF15985;
pfam_desc KH domain;
pfam_id KH_6;
pfam_target db:Pfam-A.hmm|PF15985.5 evalue:1.3e-08 score:34.3 best_domain_score:33.3 name:KH_6;
>Feature NODE_10457_length_9218_cov_21.9996
3 218 CDS
ID metaerg.pl|13822
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter barkolensis;
genomedb_acc GCF_002834295.1;
genomedb_target db:genomedb|GCF_002834295.1|WP_101071741.1 1 68 evalue:3.1e-18 qcov:95.80 identity:70.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
346 1179 CDS
ID metaerg.pl|13823
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Rhodohalobacter;s__Rhodohalobacter barkolensis;
genomedb_acc GCF_002834295.1;
genomedb_target db:genomedb|GCF_002834295.1|WP_101071740.1 7 261 evalue:9.4e-39 qcov:92.10 identity:39.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
pfam_acc PF03781;
pfam_desc Sulfatase-modifying factor enzyme 1;
pfam_id FGE-sulfatase;
pfam_target db:Pfam-A.hmm|PF03781.16 evalue:4.1e-30 score:104.5 best_domain_score:102.1 name:FGE-sulfatase;
sp YES;
346 441 signal_peptide
ID metaerg.pl|13824
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
1176 1865 CDS
ID metaerg.pl|13825
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Idiomarina;s__Idiomarina woesei;
genomedb_acc GCF_001418345.1;
genomedb_target db:genomedb|GCF_001418345.1|WP_055439789.1 47 224 evalue:3.5e-31 qcov:77.70 identity:43.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
pfam_acc PF02630;
pfam_desc SCO1/SenC;
pfam_id SCO1-SenC;
pfam_target db:Pfam-A.hmm|PF02630.14 evalue:1.9e-19 score:69.1 best_domain_score:68.7 name:SCO1-SenC;
sp YES;
1176 1253 signal_peptide
ID metaerg.pl|13826
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
2649 1855 CDS
ID metaerg.pl|13827
allgo_ids GO:0055085;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__UBA2241;f__UBA2241;g__UBA6103;s__UBA6103 sp002423545;
genomedb_acc GCA_002423545.1;
genomedb_target db:genomedb|GCA_002423545.1|DIWP01000041.1_47 9 264 evalue:6.0e-51 qcov:97.00 identity:46.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
pfam_acc PF12679;
pfam_desc ABC-2 family transporter protein;
pfam_id ABC2_membrane_2;
pfam_target db:Pfam-A.hmm|PF12679.7 evalue:3.2e-12 score:45.6 best_domain_score:45.0 name:ABC2_membrane_2;
tm_num 6;
2649 1855 transmembrane_helix
ID metaerg.pl|13828
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
topology i1912-1980o2062-2130i2230-2298o2326-2394i2413-2472o2560-2628i;
3568 2639 CDS
ID metaerg.pl|13829
allec_ids 7.6.2.-;
allgo_ids GO:0005524; GO:0005886; GO:0016887; GO:0046677;
allko_ids K01995; K01990; K02006; K02052; K01996; K06861; K02045;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea ferrariae;
genomedb_acc GCF_000603945.1;
genomedb_target db:genomedb|GCF_000603945.1|WP_052022361.1 10 294 evalue:4.2e-104 qcov:92.20 identity:70.90;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:2.3e-15 score:56.4 best_domain_score:37.0 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.1e-24 score:86.7 best_domain_score:85.9 name:ABC_tran;
sprot_desc Multidrug efflux system ATP-binding protein Rv1218c;
sprot_id sp|O86311|MEATP_MYCTU;
sprot_target db:uniprot_sprot|sp|O86311|MEATP_MYCTU 6 293 evalue:1.8e-53 qcov:93.20 identity:42.20;
4290 3565 CDS
ID metaerg.pl|13830
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Thermoleophilia;o__UBA2241;f__UBA2241;g__UBA6103;s__UBA6103 sp002423545;
genomedb_acc GCA_002423545.1;
genomedb_target db:genomedb|GCA_002423545.1|DIWP01000041.1_49 10 211 evalue:1.9e-51 qcov:83.80 identity:55.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
pfam_acc PF17933; PF00440;
pfam_desc Tetracyclin repressor-like, C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_25; TetR_N;
pfam_target db:Pfam-A.hmm|PF17933.1 evalue:4.9e-19 score:67.8 best_domain_score:66.6 name:TetR_C_25; db:Pfam-A.hmm|PF00440.23 evalue:1.8e-16 score:58.9 best_domain_score:58.2 name:TetR_N;
sprot_desc HTH-type transcriptional regulatory protein RaaS;
sprot_id sp|O86312|RAAS_MYCTU;
sprot_target db:uniprot_sprot|sp|O86312|RAAS_MYCTU 21 213 evalue:2.6e-23 qcov:80.10 identity:38.30;
4472 4397 tRNA
ID metaerg.pl|13831
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
name tRNA_Gly_gcc;
4642 4530 bac_5SrRNA
ID metaerg.pl|13832
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
7652 4720 bac_23SrRNA
ID metaerg.pl|13833
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
9150 7990 CDS
ID metaerg.pl|13834
allec_ids 3.-.-.-;
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Promineofilales;f__Promineofilaceae;g__GCA-2699125;s__GCA-2699125 sp002699125;
genomedb_acc GCA_002699125.1;
genomedb_target db:genomedb|GCA_002699125.1|MAU01081.1 1 386 evalue:2.3e-120 qcov:100.00 identity:56.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 27.3951; 120.883; 33.0446; 33.1302; 27.3134;
pfam_acc PF01321; PF00557;
pfam_desc Creatinase/Prolidase N-terminal domain; Metallopeptidase family M24;
pfam_id Creatinase_N; Peptidase_M24;
pfam_target db:Pfam-A.hmm|PF01321.18 evalue:2.9e-18 score:66.0 best_domain_score:65.3 name:Creatinase_N; db:Pfam-A.hmm|PF00557.24 evalue:9.2e-36 score:122.7 best_domain_score:122.3 name:Peptidase_M24;
sprot_desc Uncharacterized hydrolase/peptidase y4tL;
sprot_id sp|P55666|Y4TL_SINFN;
sprot_target db:uniprot_sprot|sp|P55666|Y4TL_SINFN 9 376 evalue:8.0e-35 qcov:95.30 identity:31.00;
>Feature NODE_10513_length_9186_cov_19.3219
2179 2 CDS
ID metaerg.pl|13835
allec_ids 2.1.1.13;
allgo_ids GO:0042558; GO:0031419; GO:0008705; GO:0008270;
allko_ids K00548;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__Truepera;s__Truepera radiovictrix;
genomedb_acc GCF_000092425.1;
genomedb_target db:genomedb|GCF_000092425.1|WP_013178986.1 9 726 evalue:1.3e-289 qcov:98.90 identity:70.50;
kegg_pathway_id 00670; 00271;
kegg_pathway_name One carbon pool by folate; Methionine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 17.1558; 20.8541; 19.937; 18.9323; 76.8793;
metacyc_pathway_id PWY-2201; PWY-5328; PWY-3841; METSYN-PWY; PWY-5345; P4-PWY; HOMOSER-METSYN-PWY; PWY-5347; PWY0-781; MET-SAM-PWY; 1CMET2-PWY; HSERMETANA-PWY; ADENOSYLHOMOCYSCAT-PWY;
metacyc_pathway_name folate transformations I;; superpathway of L-methionine salvage and degradation;; folate transformations II;; superpathway of L-homoserine and L-methionine biosynthesis;; superpathway of L-methionine biosynthesis (by sulfhydrylation);; superpathway of L-lysine, L-threonine and L-methionine biosynthesis I;; L-methionine biosynthesis I;; superpathway of L-methionine biosynthesis (transsulfuration);; aspartate superpathway;; superpathway of S-adenosyl-L-methionine biosynthesis;; N10-formyl-tetrahydrofolate biosynthesis;; L-methionine biosynthesis III;; L-methionine salvage from L-homocysteine;;
metacyc_pathway_type Folate-Transformations;; METHIONINE-DEG; Super-Pathways;; Folate-Transformations;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; Methionine-De-novo-Biosynthesis;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Super-Pathways;; Folate-Biosynthesis;; Methionine-De-novo-Biosynthesis; Super-Pathways;; Methionine-Salvage;;
pfam_acc PF02607; PF00809; PF02574;
pfam_desc B12 binding domain; Pterin binding enzyme; Homocysteine S-methyltransferase;
pfam_id B12-binding_2; Pterin_bind; S-methyl_trans;
pfam_target db:Pfam-A.hmm|PF02607.17 evalue:1.5e-24 score:85.5 best_domain_score:83.9 name:B12-binding_2; db:Pfam-A.hmm|PF00809.22 evalue:7.5e-52 score:175.7 best_domain_score:174.8 name:Pterin_bind; db:Pfam-A.hmm|PF02574.16 evalue:1.1e-83 score:280.4 best_domain_score:279.3 name:S-methyl_trans;
sprot_desc Methionine synthase;
sprot_id sp|Q8DCJ7|METH_VIBVU;
sprot_target db:uniprot_sprot|sp|Q8DCJ7|METH_VIBVU 5 726 evalue:4.6e-249 qcov:99.40 identity:59.80;
tigrfam_acc TIGR02082;
tigrfam_desc methionine synthase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name metH;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR02082 evalue:0 score:1085.7 best_domain_score:1085.5 name:TIGR02082;
3170 2217 CDS
ID metaerg.pl|13836
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__MPNL01;s__MPNL01 sp002239005;
genomedb_acc GCA_002239005.1;
genomedb_target db:genomedb|GCA_002239005.1|MPNL01000047.1_6 1 317 evalue:9.9e-85 qcov:100.00 identity:52.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 17.1558; 20.8541; 19.937; 18.9323; 76.8793;
pfam_acc PF12730;
pfam_desc ABC-2 family transporter protein;
pfam_id ABC2_membrane_4;
pfam_target db:Pfam-A.hmm|PF12730.7 evalue:2.4e-08 score:33.4 best_domain_score:32.4 name:ABC2_membrane_4;
tm_num 6;
3170 2217 transmembrane_helix
ID metaerg.pl|13837
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 17.1558; 20.8541; 19.937; 18.9323; 76.8793;
topology i2277-2345o2445-2513i2595-2663o2721-2789i2808-2876o3075-3143i;
4078 3167 CDS
ID metaerg.pl|13838
allgo_ids GO:0005524; GO:0016887;
allko_ids K02023; K01990; K05816; K09687; K10111; K01998; K01995; K02049; K02045; K11072; K06861; K01996; K02017; K02052; K02006; K02010; K05847;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__Truepera;s__Truepera radiovictrix;
genomedb_acc GCF_000092425.1;
genomedb_target db:genomedb|GCF_000092425.1|WP_013177094.1 4 303 evalue:1.2e-98 qcov:99.00 identity:66.40;
kegg_pathway_id 02010;
kegg_pathway_name ABC transporters - General;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 17.1558; 20.8541; 19.937; 18.9323; 76.8793;
pfam_acc PF13304; PF00005;
pfam_desc AAA domain, putative AbiEii toxin, Type IV TA system; ABC transporter;
pfam_id AAA_21; ABC_tran;
pfam_target db:Pfam-A.hmm|PF13304.6 evalue:9.5e-12 score:44.6 best_domain_score:27.8 name:AAA_21; db:Pfam-A.hmm|PF00005.27 evalue:1.3e-26 score:93.0 best_domain_score:92.4 name:ABC_tran;
sprot_desc Uncharacterized ABC transporter ATP-binding protein YhcH;
sprot_id sp|P54592|YHCH_BACSU;
sprot_target db:uniprot_sprot|sp|P54592|YHCH_BACSU 1 295 evalue:6.7e-45 qcov:97.40 identity:35.80;
5158 4154 CDS
ID metaerg.pl|13839
allec_ids 1.1.1.94;
allgo_ids GO:0050661; GO:0009331; GO:0047952; GO:0004367; GO:0051287; GO:0005975; GO:0046167; GO:0046168; GO:0006650; GO:0008654;
allko_ids K00006; K00057;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__Truepera;s__Truepera radiovictrix;
genomedb_acc GCF_000092425.1;
genomedb_target db:genomedb|GCF_000092425.1|WP_013177093.1 1 334 evalue:3.6e-77 qcov:100.00 identity:52.20;
kegg_pathway_id 00564;
kegg_pathway_name Glycerophospholipid metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 17.1558; 20.8541; 19.937; 18.9323; 76.8793;
metacyc_pathway_id PWY-5667; PHOSLIPSYN2-PWY; PWY-5981; PWY4FS-7; PWY0-1319; PWY4FS-8; PHOSLIPSYN-PWY;
metacyc_pathway_name CDP-diacylglycerol biosynthesis I;; superpathway of phospholipid biosynthesis II (plants);; CDP-diacylglycerol biosynthesis III;; phosphatidylglycerol biosynthesis I (plastidic);; CDP-diacylglycerol biosynthesis II;; phosphatidylglycerol biosynthesis II (non-plastidic);; superpathway of phospholipid biosynthesis I (bacteria);;
metacyc_pathway_type CDP-diacylglycerol-Biosynthesis;; Phospholipid-Biosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; CDP-diacylglycerol-Biosynthesis;; PhosphatidylglycerolBiosynthesis; Super-Pathways;; Phospholipid-Biosynthesis; Super-Pathways;;
pfam_acc PF02558; PF03807; PF03446; PF07479; PF01210;
pfam_desc Ketopantoate reductase PanE/ApbA; NADP oxidoreductase coenzyme F420-dependent; NAD binding domain of 6-phosphogluconate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus;
pfam_id ApbA; F420_oxidored; NAD_binding_2; NAD_Gly3P_dh_C; NAD_Gly3P_dh_N;
pfam_target db:Pfam-A.hmm|PF02558.16 evalue:2.5e-07 score:29.7 best_domain_score:27.5 name:ApbA; db:Pfam-A.hmm|PF03807.17 evalue:2.1e-06 score:27.5 best_domain_score:26.2 name:F420_oxidored; db:Pfam-A.hmm|PF03446.15 evalue:0.00012 score:21.6 best_domain_score:20.2 name:NAD_binding_2; db:Pfam-A.hmm|PF07479.14 evalue:9.6e-47 score:158.1 best_domain_score:157.6 name:NAD_Gly3P_dh_C; db:Pfam-A.hmm|PF01210.23 evalue:3.2e-30 score:104.4 best_domain_score:104.0 name:NAD_Gly3P_dh_N;
sprot_desc Glycerol-3-phosphate dehydrogenase [NAD(P)+];
sprot_id sp|Q8FPR0|GPDA_COREF;
sprot_target db:uniprot_sprot|sp|Q8FPR0|GPDA_COREF 14 334 evalue:2.1e-60 qcov:96.10 identity:43.50;
5292 5672 CDS
ID metaerg.pl|13840
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__Truepera;s__Truepera radiovictrix;
genomedb_acc GCF_000092425.1;
genomedb_target db:genomedb|GCF_000092425.1|WP_013177092.1 1 94 evalue:2.1e-17 qcov:74.60 identity:60.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 17.1558; 20.8541; 19.937; 18.9323; 76.8793;
6551 5745 CDS
ID metaerg.pl|13841
allec_ids 2.3.2.5;
allgo_ids GO:0016603; GO:0017186; GO:0005789; GO:0016021; GO:0005886;
allko_ids K22757;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__Truepera;s__Truepera radiovictrix;
genomedb_acc GCF_000092425.1;
genomedb_target db:genomedb|GCF_000092425.1|WP_013177091.1 2 263 evalue:1.2e-75 qcov:97.80 identity:59.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 17.1558; 20.8541; 19.937; 18.9323; 76.8793;
pfam_acc PF05096;
pfam_desc Glutamine cyclotransferase;
pfam_id Glu_cyclase_2;
pfam_target db:Pfam-A.hmm|PF05096.12 evalue:6.2e-88 score:293.7 best_domain_score:293.4 name:Glu_cyclase_2;
sp YES;
sprot_desc Glutaminyl-peptide cyclotransferase;
sprot_id sp|Q84WV9|QPCT_ARATH;
sprot_target db:uniprot_sprot|sp|Q84WV9|QPCT_ARATH 26 267 evalue:1.5e-40 qcov:90.30 identity:40.20;
5745 5825 lipoprotein_signal_peptide
ID metaerg.pl|13842
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 17.1558; 20.8541; 19.937; 18.9323; 76.8793;
7201 6548 CDS
ID metaerg.pl|13843
allec_ids 2.7.4.9;
allgo_ids GO:0005737; GO:0005829; GO:0005524; GO:0004798; GO:0009041; GO:0006233; GO:0006235; GO:0006227;
allko_ids K00943;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__Truepera;s__Truepera radiovictrix;
genomedb_acc GCF_000092425.1;
genomedb_target db:genomedb|GCF_000092425.1|WP_013177084.1 7 209 evalue:3.3e-55 qcov:93.50 identity:58.60;
kegg_pathway_id 00240;
kegg_pathway_name Pyrimidine metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 17.1558; 20.8541; 19.937; 18.9323; 76.8793;
metacyc_pathway_id PWY0-166; P1-PWY; PWY-6545;
metacyc_pathway_name superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli);; ; pyrimidine deoxyribonucleotides de novo biosynthesis III;;
metacyc_pathway_type Pyrimid-Deoxyribonucleot-De-Novo-Biosyn; Super-Pathways;; ; Metabolic-Clusters; Pyrimid-Deoxyribonucleot-De-Novo-Biosyn;;
pfam_acc PF02223;
pfam_desc Thymidylate kinase;
pfam_id Thymidylate_kin;
pfam_target db:Pfam-A.hmm|PF02223.17 evalue:1.8e-47 score:160.6 best_domain_score:160.4 name:Thymidylate_kin;
sprot_desc Thymidylate kinase;
sprot_id sp|Q9RY40|KTHY_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RY40|KTHY_DEIRA 7 204 evalue:4.5e-51 qcov:91.20 identity:52.50;
tigrfam_acc TIGR00041;
tigrfam_desc dTMP kinase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name DTMP_kinase;
tigrfam_sub1role Nucleotide and nucleoside interconversions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00041 evalue:6.3e-48 score:162.2 best_domain_score:162.0 name:TIGR00041;
7953 7198 CDS
ID metaerg.pl|13844
allgo_ids GO:0005737; GO:0005739; GO:0046872;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__Truepera;s__Truepera radiovictrix;
genomedb_acc GCF_000092425.1;
genomedb_target db:genomedb|GCF_000092425.1|WP_013177083.1 1 251 evalue:4.9e-95 qcov:100.00 identity:66.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 17.1558; 20.8541; 19.937; 18.9323; 76.8793;
pfam_acc PF01784;
pfam_desc NIF3 (NGG1p interacting factor 3);
pfam_id NIF3;
pfam_target db:Pfam-A.hmm|PF01784.18 evalue:4.7e-56 score:189.4 best_domain_score:189.1 name:NIF3;
sprot_desc GTP cyclohydrolase 1 type 2 homolog;
sprot_id sp|Q9RY41|GCH1L_DEIRA;
sprot_target db:uniprot_sprot|sp|Q9RY41|GCH1L_DEIRA 3 251 evalue:5.3e-80 qcov:99.20 identity:53.40;
tigrfam_acc TIGR00486;
tigrfam_desc dinuclear metal center protein, YbgI/SA1388 family;
tigrfam_mainrole Unknown function;
tigrfam_name YbgI_SA1388;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00486 evalue:4.1e-50 score:170.0 best_domain_score:169.8 name:TIGR00486;
8393 9186 bac_16SrRNA
ID metaerg.pl|13845
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 17.1558; 20.8541; 19.937; 18.9323; 76.8793;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KC852965.1.1423 6 792 evalue:0.0 qcov:99 identity:91.403;
rRNA_taxon Bacteria;Deinococcus-Thermus;Deinococci;Deinococcales;
>Feature NODE_11218_length_8808_cov_6.08923
387 499 bac_5SrRNA
ID metaerg.pl|13846
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.0686; 6.97921; 9.55994; 0.805729; 2.72372;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
714 1700 CDS
ID metaerg.pl|13847
allgo_ids GO:0005525; GO:0005737; GO:0005886; GO:0003924; GO:0070181; GO:0042274;
allko_ids K03595;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC05540.1 11 314 evalue:2.2e-66 qcov:92.70 identity:48.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.0686; 6.97921; 9.55994; 0.805729; 2.72372;
pfam_acc PF00350; PF02421; PF00009; PF07650; PF01926;
pfam_desc Dynamin family; Ferrous iron transport protein B; Elongation factor Tu GTP binding domain; KH domain; 50S ribosome-binding GTPase;
pfam_id Dynamin_N; FeoB_N; GTP_EFTU; KH_2; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00350.23 evalue:2.1e-06 score:27.1 best_domain_score:16.9 name:Dynamin_N; db:Pfam-A.hmm|PF02421.18 evalue:9.2e-12 score:44.0 best_domain_score:43.4 name:FeoB_N; db:Pfam-A.hmm|PF00009.27 evalue:3.4e-07 score:29.2 best_domain_score:23.6 name:GTP_EFTU; db:Pfam-A.hmm|PF07650.17 evalue:2.7e-12 score:45.6 best_domain_score:44.9 name:KH_2; db:Pfam-A.hmm|PF01926.23 evalue:2.8e-20 score:71.7 best_domain_score:71.2 name:MMR_HSR1;
sp YES;
sprot_desc GTPase Era;
sprot_id sp|A5EKL6|ERA_BRASB;
sprot_target db:uniprot_sprot|sp|A5EKL6|ERA_BRASB 15 314 evalue:5.4e-48 qcov:91.50 identity:38.90;
tigrfam_acc TIGR00231; TIGR00436;
tigrfam_desc small GTP-binding protein domain; GTP-binding protein Era;
tigrfam_mainrole Unknown function; Protein synthesis;
tigrfam_name small_GTP; era;
tigrfam_sub1role General; Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:9.5e-15 score:53.9 best_domain_score:53.6 name:TIGR00231; db:TIGRFAMs.hmm|TIGR00436 evalue:3.6e-56 score:189.6 best_domain_score:189.4 name:TIGR00436;
714 866 signal_peptide
ID metaerg.pl|13848
Note TAT;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.0686; 6.97921; 9.55994; 0.805729; 2.72372;
1700 2737 CDS
ID metaerg.pl|13849
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000005.1_199 37 345 evalue:1.9e-65 qcov:89.60 identity:45.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.0686; 6.97921; 9.55994; 0.805729; 2.72372;
sp YES;
1700 1798 signal_peptide
ID metaerg.pl|13850
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.0686; 6.97921; 9.55994; 0.805729; 2.72372;
2840 5104 CDS
ID metaerg.pl|13851
allec_ids 3.1.13.1;
allgo_ids GO:0003723; GO:0004540; GO:0005829; GO:0008859;
allko_ids K12573;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000090.1_4 10 698 evalue:2.4e-201 qcov:91.40 identity:54.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.0686; 6.97921; 9.55994; 0.805729; 2.72372;
metacyc_pathway_id PWY0-1479;
metacyc_pathway_name tRNA processing;;
metacyc_pathway_type Nucleic-Acid-Processing;;
pfam_acc PF17876; PF17849; PF08206; PF00773; PF00575;
pfam_desc Cold shock domain; Dis3-like cold-shock domain 2 (CSD2); Ribonuclease B OB domain; RNB domain; S1 RNA binding domain;
pfam_id CSD2; OB_Dis3; OB_RNB; RNB; S1;
pfam_target db:Pfam-A.hmm|PF17876.1 evalue:1.2e-26 score:91.9 best_domain_score:63.2 name:CSD2; db:Pfam-A.hmm|PF17849.1 evalue:1.3e-06 score:27.6 best_domain_score:19.7 name:OB_Dis3; db:Pfam-A.hmm|PF08206.11 evalue:7.3e-17 score:60.0 best_domain_score:43.2 name:OB_RNB; db:Pfam-A.hmm|PF00773.19 evalue:1.5e-104 score:349.1 best_domain_score:348.8 name:RNB; db:Pfam-A.hmm|PF00575.23 evalue:1.5e-14 score:53.3 best_domain_score:50.8 name:S1;
sprot_desc Ribonuclease R;
sprot_id sp|O32231|RNR_BACSU;
sprot_target db:uniprot_sprot|sp|O32231|RNR_BACSU 21 715 evalue:2.6e-138 qcov:92.20 identity:38.10;
tigrfam_acc TIGR00358; TIGR02063;
tigrfam_desc VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R;
tigrfam_mainrole Transcription; Transcription;
tigrfam_name 3_prime_RNase; RNase_R;
tigrfam_sub1role Degradation of RNA; Degradation of RNA;
tigrfam_target db:TIGRFAMs.hmm|TIGR00358 evalue:1e-174 score:581.6 best_domain_score:581.3 name:TIGR00358; db:TIGRFAMs.hmm|TIGR02063 evalue:2.7e-227 score:755.7 best_domain_score:755.5 name:TIGR02063;
5229 6275 CDS
ID metaerg.pl|13852
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000090.1_5 1 317 evalue:7.0e-100 qcov:91.10 identity:58.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.0686; 6.97921; 9.55994; 0.805729; 2.72372;
pfam_acc PF00990;
pfam_desc Diguanylate cyclase, GGDEF domain;
pfam_id GGDEF;
pfam_target db:Pfam-A.hmm|PF00990.21 evalue:1.4e-12 score:46.9 best_domain_score:45.1 name:GGDEF;
tigrfam_acc TIGR00254;
tigrfam_desc diguanylate cyclase (GGDEF) domain;
tigrfam_mainrole Signal transduction;
tigrfam_name GGDEF;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR00254 evalue:8.6e-13 score:47.5 best_domain_score:46.2 name:TIGR00254;
6272 6937 CDS
ID metaerg.pl|13853
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__20CM-2-65-7;s__20CM-2-65-7 sp003223395;
genomedb_acc GCA_003223395.1;
genomedb_target db:genomedb|GCA_003223395.1|PYP57663.1 6 214 evalue:6.6e-27 qcov:94.60 identity:38.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.0686; 6.97921; 9.55994; 0.805729; 2.72372;
pfam_acc PF13717;
pfam_desc zinc-ribbon domain;
pfam_id zinc_ribbon_4;
pfam_target db:Pfam-A.hmm|PF13717.6 evalue:3.8e-08 score:32.4 best_domain_score:31.1 name:zinc_ribbon_4;
tigrfam_acc TIGR02098;
tigrfam_desc MJ0042 family finger-like domain;
tigrfam_name MJ0042_CXXC;
tigrfam_target db:TIGRFAMs.hmm|TIGR02098 evalue:8.7e-06 score:24.5 best_domain_score:23.9 name:TIGR02098;
7275 8270 CDS
ID metaerg.pl|13854
allgo_ids GO:0006415; GO:0005737; GO:0016149;
allko_ids K02836;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA822;s__UBA822 sp002731735;
genomedb_acc GCA_002731735.1;
genomedb_target db:genomedb|GCA_002731735.1|MBV25421.1 1 324 evalue:1.5e-136 qcov:97.90 identity:75.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.0686; 6.97921; 9.55994; 0.805729; 2.72372;
pfam_acc PF03462; PF00472;
pfam_desc PCRF domain; RF-1 domain;
pfam_id PCRF; RF-1;
pfam_target db:Pfam-A.hmm|PF03462.18 evalue:1.2e-58 score:197.5 best_domain_score:194.6 name:PCRF; db:Pfam-A.hmm|PF00472.20 evalue:5.4e-44 score:148.1 best_domain_score:147.2 name:RF-1;
sprot_desc Peptide chain release factor 2;
sprot_id sp|C4L5K9|RF2_EXISA;
sprot_target db:uniprot_sprot|sp|C4L5K9|RF2_EXISA 1 324 evalue:3.6e-100 qcov:97.90 identity:55.20;
tigrfam_acc TIGR00020;
tigrfam_desc peptide chain release factor 2;
tigrfam_mainrole Protein synthesis;
tigrfam_name prfB;
tigrfam_sub1role Translation factors;
tigrfam_target db:TIGRFAMs.hmm|TIGR00020 evalue:1.1e-147 score:490.9 best_domain_score:490.7 name:TIGR00020;
8267 8806 CDS
ID metaerg.pl|13855
allec_ids 6.1.1.6;
allgo_ids GO:0003676; GO:0005737; GO:0005524; GO:0004824; GO:0000287; GO:0006430;
allko_ids K04567;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA1138;s__UBA1138 sp003447875;
genomedb_acc GCA_003447875.1;
genomedb_target db:genomedb|GCA_003447875.1|HAC05726.1 3 180 evalue:3.1e-59 qcov:98.90 identity:62.90;
kegg_pathway_id 00300; 00970;
kegg_pathway_name Lysine biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.0686; 6.97921; 9.55994; 0.805729; 2.72372;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF01336;
pfam_desc OB-fold nucleic acid binding domain;
pfam_id tRNA_anti-codon;
pfam_target db:Pfam-A.hmm|PF01336.25 evalue:3.2e-16 score:58.3 best_domain_score:57.8 name:tRNA_anti-codon;
sprot_desc Lysine--tRNA ligase;
sprot_id sp|Q3A9M2|SYK_CARHZ;
sprot_target db:uniprot_sprot|sp|Q3A9M2|SYK_CARHZ 3 180 evalue:2.9e-35 qcov:98.90 identity:44.40;
>Feature NODE_11633_length_8592_cov_7.97622
144 431 CDS
ID metaerg.pl|13856
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.6085; ; 13.6085; ;
pfam_acc PF01697;
pfam_desc Glycosyltransferase family 92;
pfam_id Glyco_transf_92;
pfam_target db:Pfam-A.hmm|PF01697.27 evalue:4.5e-05 score:22.4 best_domain_score:22.1 name:Glyco_transf_92;
1045 785 CDS
ID metaerg.pl|13857
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.6085; ; 13.6085; ;
1647 1910 CDS
ID metaerg.pl|13858
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.6085; ; 13.6085; ;
1910 2386 CDS
ID metaerg.pl|13859
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.6085; ; 13.6085; ;
2387 2590 CDS
ID metaerg.pl|13860
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.6085; ; 13.6085; ;
3468 3133 CDS
ID metaerg.pl|13861
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.6085; ; 13.6085; ;
4280 4080 CDS
ID metaerg.pl|13862
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.6085; ; 13.6085; ;
5060 4875 CDS
ID metaerg.pl|13863
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.6085; ; 13.6085; ;
5805 6032 CDS
ID metaerg.pl|13864
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.6085; ; 13.6085; ;
7589 7374 CDS
ID metaerg.pl|13865
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.6085; ; 13.6085; ;
sp YES;
7374 7490 signal_peptide
ID metaerg.pl|13866
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.6085; ; 13.6085; ;
8550 8149 CDS
ID metaerg.pl|13867
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.6085; ; 13.6085; ;
>Feature NODE_12056_length_8385_cov_7.57599
3 311 CDS
ID metaerg.pl|13868
allec_ids 6.3.4.5;
allgo_ids GO:0004055; GO:0005524; GO:0006526; GO:0005737;
allko_ids K01955; K01940;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667397.1 1 101 evalue:2.6e-47 qcov:99.00 identity:88.10;
kegg_pathway_id 00240; 00330; 00251; 00252; 00220;
kegg_pathway_name Pyrimidine metabolism; Arginine and proline metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.7633; ; ; 10.7633;
metacyc_pathway_id ARGININE-SYN4-PWY; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; PWY-5; PWY-4984; PWY-5004; PWY-5154; PWY-4983; ARGSYN-PWY;
metacyc_pathway_name L-ornithine biosynthesis II;; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; canavanine biosynthesis;; urea cycle;; superpathway of L-citrulline metabolism;; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type L-Ornithine-Biosynthesis;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; NITROGEN-DEG;; Citrulline-Biosynthesis; Super-Pathways;; ARGININE-SYN;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF00764;
pfam_desc Arginosuccinate synthase;
pfam_id Arginosuc_synth;
pfam_target db:Pfam-A.hmm|PF00764.19 evalue:8e-30 score:103.6 best_domain_score:103.5 name:Arginosuc_synth;
sprot_desc Argininosuccinate synthase;
sprot_id sp|B8HSA9|ASSY_CYAP4;
sprot_target db:uniprot_sprot|sp|B8HSA9|ASSY_CYAP4 2 96 evalue:1.6e-27 qcov:93.10 identity:57.90;
308 1060 CDS
ID metaerg.pl|13869
allko_ids K01759;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667398.1 5 241 evalue:2.0e-32 qcov:94.80 identity:36.60;
kegg_pathway_id 00620; 04011;
kegg_pathway_name Pyruvate metabolism; MAPK signaling pathway - yeast;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.7633; ; ; 10.7633;
pfam_acc PF18029;
pfam_desc Glyoxalase-like domain;
pfam_id Glyoxalase_6;
pfam_target db:Pfam-A.hmm|PF18029.1 evalue:2.3e-30 score:104.8 best_domain_score:56.5 name:Glyoxalase_6;
1057 1776 CDS
ID metaerg.pl|13870
allko_ids K01759;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667398.1 9 239 evalue:1.5e-32 qcov:96.70 identity:39.10;
kegg_pathway_id 00620; 04011;
kegg_pathway_name Pyruvate metabolism; MAPK signaling pathway - yeast;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.7633; ; ; 10.7633;
pfam_acc PF18029;
pfam_desc Glyoxalase-like domain;
pfam_id Glyoxalase_6;
pfam_target db:Pfam-A.hmm|PF18029.1 evalue:7e-34 score:116.1 best_domain_score:64.2 name:Glyoxalase_6;
1758 2621 CDS
ID metaerg.pl|13871
allgo_ids GO:0016747;
allko_ids K00619; K06957; K03824; K01207;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667399.1 29 279 evalue:2.0e-55 qcov:87.50 identity:47.80;
kegg_pathway_id 00220; 01032; 00530;
kegg_pathway_name Urea cycle and metabolism of amino groups; Glycan structures - degradation; Aminosugars metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.7633; ; ; 10.7633;
pfam_acc PF00583; PF13673; PF13508; PF08445;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; Acetyltransferase (GNAT) domain; FR47-like protein;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_7; FR47;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:3.7e-16 score:58.6 best_domain_score:57.9 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:1.4e-10 score:40.5 best_domain_score:39.9 name:Acetyltransf_10; db:Pfam-A.hmm|PF13508.7 evalue:3.9e-09 score:36.1 best_domain_score:35.2 name:Acetyltransf_7; db:Pfam-A.hmm|PF08445.10 evalue:1.8e-09 score:36.6 best_domain_score:35.7 name:FR47;
2618 4033 CDS
ID metaerg.pl|13872
allec_ids 4.3.2.1;
allgo_ids GO:0005737; GO:0004056; GO:0042450;
allko_ids K01857; K01756; K01744; K01679; K01755;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667400.1 8 469 evalue:8.0e-224 qcov:98.10 identity:85.30;
kegg_pathway_id 00720; 00230; 00020; 00910; 00362; 00330; 00252; 00220;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Purine metabolism; Citrate cycle (TCA cycle); Nitrogen metabolism; Benzoate degradation via hydroxylation; Arginine and proline metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.7633; ; ; 10.7633;
metacyc_pathway_id ARGSYNBSUB-PWY; ARGININE-SYN4-PWY; ARG+POLYAMINE-SYN; PWY-5; PWY-5004; PWY-4984; ARGSYN-PWY; PWY-5154; PWY-4983;
metacyc_pathway_name L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis II;; superpathway of arginine and polyamine biosynthesis;; canavanine biosynthesis;; superpathway of L-citrulline metabolism;; urea cycle;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; nitric oxide biosynthesis II (mammals);;
metacyc_pathway_type ARGININE-SYN;; L-Ornithine-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; Citrulline-Biosynthesis; Super-Pathways;; NITROGEN-DEG;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;;
pfam_acc PF14698; PF00206;
pfam_desc Argininosuccinate lyase C-terminal; Lyase;
pfam_id ASL_C2; Lyase_1;
pfam_target db:Pfam-A.hmm|PF14698.6 evalue:9.4e-22 score:76.8 best_domain_score:76.5 name:ASL_C2; db:Pfam-A.hmm|PF00206.20 evalue:3e-64 score:216.6 best_domain_score:216.3 name:Lyase_1;
sprot_desc Argininosuccinate lyase;
sprot_id sp|Q2J867|ARLY_FRACC;
sprot_target db:uniprot_sprot|sp|Q2J867|ARLY_FRACC 12 462 evalue:7.8e-133 qcov:95.80 identity:56.50;
tigrfam_acc TIGR00838;
tigrfam_desc argininosuccinate lyase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argH;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00838 evalue:2.4e-161 score:536.9 best_domain_score:536.7 name:TIGR00838;
4042 4794 CDS
ID metaerg.pl|13873
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Amycolatopsis;s__Amycolatopsis xylanica;
genomedb_acc GCF_900107045.1;
genomedb_target db:genomedb|GCF_900107045.1|WP_091298925.1 5 249 evalue:7.6e-48 qcov:98.00 identity:47.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.7633; ; ; 10.7633;
pfam_acc PF02585;
pfam_desc GlcNAc-PI de-N-acetylase;
pfam_id PIG-L;
pfam_target db:Pfam-A.hmm|PF02585.17 evalue:7.5e-09 score:35.6 best_domain_score:34.8 name:PIG-L;
4843 6717 CDS
ID metaerg.pl|13874
allec_ids 2.7.7.7; 3.1.11.1;
allgo_ids GO:0003677; GO:0003887; GO:0008852; GO:0046872; GO:0006281; GO:0006260;
allko_ids K04486; K02347;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667402.1 1 621 evalue:1.8e-218 qcov:99.50 identity:66.30;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.7633; ; ; 10.7633;
pfam_acc PF14791; PF00633; PF14520; PF14716; PF02811;
pfam_desc DNA polymerase beta thumb ; Helix-hairpin-helix motif; Helix-hairpin-helix domain; Helix-hairpin-helix domain; PHP domain;
pfam_id DNA_pol_B_thumb; HHH; HHH_5; HHH_8; PHP;
pfam_target db:Pfam-A.hmm|PF14791.6 evalue:1.4e-20 score:72.4 best_domain_score:71.0 name:DNA_pol_B_thumb; db:Pfam-A.hmm|PF00633.23 evalue:2.2e-07 score:29.6 best_domain_score:13.1 name:HHH; db:Pfam-A.hmm|PF14520.6 evalue:2.7e-11 score:43.1 best_domain_score:30.6 name:HHH_5; db:Pfam-A.hmm|PF14716.6 evalue:3.6e-20 score:71.3 best_domain_score:57.8 name:HHH_8; db:Pfam-A.hmm|PF02811.19 evalue:8e-07 score:28.7 best_domain_score:27.2 name:PHP;
sprot_desc DNA polymerase/3'-5' exonuclease PolX;
sprot_id sp|P94544|POLX_BACSU;
sprot_target db:uniprot_sprot|sp|P94544|POLX_BACSU 4 617 evalue:7.0e-89 qcov:98.40 identity:33.20;
6714 7439 CDS
ID metaerg.pl|13875
allec_ids 3.2.2.-;
allgo_ids GO:0003677; GO:0003905; GO:0006284;
allko_ids K03652;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669755.1 37 231 evalue:4.2e-51 qcov:80.90 identity:61.00;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 10.7633; ; ; 10.7633;
metacyc_pathway_id PWY-5381; PWY-2681;
metacyc_pathway_name pyridine nucleotide cycling (plants);; trans-zeatin biosynthesis;;
metacyc_pathway_type NAD-Metabolism;; CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF02245;
pfam_desc Methylpurine-DNA glycosylase (MPG);
pfam_id Pur_DNA_glyco;
pfam_target db:Pfam-A.hmm|PF02245.16 evalue:2.4e-51 score:172.9 best_domain_score:172.6 name:Pur_DNA_glyco;
sprot_desc Putative 3-methyladenine DNA glycosylase;
sprot_id sp|Q0SI65|3MGH_RHOJR;
sprot_target db:uniprot_sprot|sp|Q0SI65|3MGH_RHOJR 38 236 evalue:1.5e-31 qcov:82.60 identity:45.40;
tigrfam_acc TIGR00567;
tigrfam_desc DNA-3-methyladenine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name 3mg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00567 evalue:3.1e-44 score:150.0 best_domain_score:149.8 name:TIGR00567;
>Feature NODE_12608_length_8128_cov_7.72216
1961 657 CDS
ID metaerg.pl|13876
allec_ids 4.3.2.1;
allgo_ids GO:0005737; GO:0004056; GO:0042450;
allko_ids K01744; K01679; K01857; K01756; K01755;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724278.1 1 430 evalue:4.7e-186 qcov:99.10 identity:78.10;
kegg_pathway_id 00910; 00362; 00330; 00252; 00220; 00720; 00230; 00020;
kegg_pathway_name Nitrogen metabolism; Benzoate degradation via hydroxylation; Arginine and proline metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Reductive carboxylate cycle (CO2 fixation); Purine metabolism; Citrate cycle (TCA cycle);
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.5861; 0.109426; 0.2908; 12.2714; 0.285034;
metacyc_pathway_id PWY-5004; PWY-4984; ARG+POLYAMINE-SYN; PWY-5; ARGININE-SYN4-PWY; ARGSYNBSUB-PWY; PWY-4983; PWY-5154; ARGSYN-PWY;
metacyc_pathway_name superpathway of L-citrulline metabolism;; urea cycle;; superpathway of arginine and polyamine biosynthesis;; canavanine biosynthesis;; L-ornithine biosynthesis II;; L-arginine biosynthesis II (acetyl cycle);; nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type Citrulline-Biosynthesis; Super-Pathways;; NITROGEN-DEG;; Polyamine-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; L-Ornithine-Biosynthesis;; ARGININE-SYN;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF00206;
pfam_desc Lyase;
pfam_id Lyase_1;
pfam_target db:Pfam-A.hmm|PF00206.20 evalue:1.3e-46 score:158.7 best_domain_score:158.2 name:Lyase_1;
sprot_desc Argininosuccinate lyase;
sprot_id sp|Q8PK32|ARLY_XANAC;
sprot_target db:uniprot_sprot|sp|Q8PK32|ARLY_XANAC 1 430 evalue:2.5e-130 qcov:99.10 identity:56.40;
2985 2035 CDS
ID metaerg.pl|13877
allec_ids 1.2.1.38;
allgo_ids GO:0016620; GO:0051287; GO:0055114; GO:0005737; GO:0003942; GO:0006526;
allko_ids K00145; K00618; K00930; K00133; K12659;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724277.1 4 314 evalue:1.7e-129 qcov:98.40 identity:71.70;
kegg_pathway_id 00220; 00300; 00260;
kegg_pathway_name Urea cycle and metabolism of amino groups; Lysine biosynthesis; Glycine, serine and threonine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.5861; 0.109426; 0.2908; 12.2714; 0.285034;
metacyc_pathway_id ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; GLUTORN-PWY; ARGSYN-PWY; PWY-5154;
metacyc_pathway_name L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; L-ornithine biosynthesis I;; L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);;
metacyc_pathway_type ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; L-Ornithine-Biosynthesis;; ARGININE-SYN; Super-Pathways;; ARGININE-SYN;;
pfam_acc PF01118; PF02774;
pfam_desc Semialdehyde dehydrogenase, NAD binding domain; Semialdehyde dehydrogenase, dimerisation domain;
pfam_id Semialdhyde_dh; Semialdhyde_dhC;
pfam_target db:Pfam-A.hmm|PF01118.24 evalue:2.8e-23 score:81.9 best_domain_score:80.9 name:Semialdhyde_dh; db:Pfam-A.hmm|PF02774.18 evalue:7.8e-11 score:41.6 best_domain_score:40.2 name:Semialdhyde_dhC;
sprot_desc N-acetyl-gamma-glutamyl-phosphate reductase;
sprot_id sp|Q2P2F6|ARGC_XANOM;
sprot_target db:uniprot_sprot|sp|Q2P2F6|ARGC_XANOM 2 314 evalue:1.7e-83 qcov:99.10 identity:49.20;
tigrfam_acc TIGR01850;
tigrfam_desc N-acetyl-gamma-glutamyl-phosphate reductase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argC;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01850 evalue:2.8e-79 score:266.0 best_domain_score:263.3 name:TIGR01850;
4344 2989 CDS
ID metaerg.pl|13878
allec_ids 2.7.2.8;
allgo_ids GO:0005737; GO:0003991; GO:0005524; GO:0006526;
allko_ids K00620; K00145; K00619; K00618; K01438; K00930; K12659; K22478;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049724276.1 15 448 evalue:9.5e-190 qcov:96.20 identity:77.60;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.5861; 0.109426; 0.2908; 12.2714; 0.285034;
metacyc_pathway_id GLUTORN-PWY; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; PWY-5154; ARGSYN-PWY;
metacyc_pathway_name L-ornithine biosynthesis I;; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type L-Ornithine-Biosynthesis;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF00696; PF04768;
pfam_desc Amino acid kinase family; NAT, N-acetyltransferase, of N-acetylglutamate synthase;
pfam_id AA_kinase; NAT;
pfam_target db:Pfam-A.hmm|PF00696.28 evalue:8e-25 score:87.1 best_domain_score:86.7 name:AA_kinase; db:Pfam-A.hmm|PF04768.13 evalue:6.2e-29 score:100.1 best_domain_score:99.4 name:NAT;
sprot_desc Acetylglutamate kinase;
sprot_id sp|Q9PEM7|ARGB_XYLFA;
sprot_target db:uniprot_sprot|sp|Q9PEM7|ARGB_XYLFA 29 439 evalue:8.0e-111 qcov:91.10 identity:48.70;
tigrfam_acc TIGR00761;
tigrfam_desc acetylglutamate kinase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argB;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00761 evalue:1.3e-55 score:187.6 best_domain_score:187.2 name:TIGR00761;
4559 4341 CDS
ID metaerg.pl|13879
allgo_ids GO:0005509;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315;s__GCA-2722315 sp002722315;
genomedb_acc GCA_002722315.1;
genomedb_target db:genomedb|GCA_002722315.1|MBL38533.1 1 72 evalue:1.6e-19 qcov:100.00 identity:68.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.5861; 0.109426; 0.2908; 12.2714; 0.285034;
pfam_acc PF00036; PF13202; PF13405; PF13499; PF13833;
pfam_desc EF hand; EF hand; EF-hand domain; EF-hand domain pair; EF-hand domain pair;
pfam_id EF-hand_1; EF-hand_5; EF-hand_6; EF-hand_7; EF-hand_8;
pfam_target db:Pfam-A.hmm|PF00036.32 evalue:1.9e-15 score:54.5 best_domain_score:28.1 name:EF-hand_1; db:Pfam-A.hmm|PF13202.6 evalue:3.5e-15 score:54.0 best_domain_score:28.4 name:EF-hand_5; db:Pfam-A.hmm|PF13405.6 evalue:6.6e-13 score:46.7 best_domain_score:25.0 name:EF-hand_6; db:Pfam-A.hmm|PF13499.6 evalue:6.5e-13 score:48.2 best_domain_score:47.9 name:EF-hand_7; db:Pfam-A.hmm|PF13833.6 evalue:1.3e-11 score:43.4 best_domain_score:21.7 name:EF-hand_8;
4839 7556 CDS
ID metaerg.pl|13880
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__Bradyrhizobium;s__Bradyrhizobium sp000244915;
genomedb_acc GCF_000244915.1;
genomedb_target db:genomedb|GCF_000244915.1|WP_007604779.1 135 889 evalue:3.9e-134 qcov:83.40 identity:37.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.5861; 0.109426; 0.2908; 12.2714; 0.285034;
pfam_acc PF00082;
pfam_desc Subtilase family;
pfam_id Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:9.2e-35 score:119.6 best_domain_score:118.8 name:Peptidase_S8;
sp YES;
tm_num 1;
4839 4928 signal_peptide
ID metaerg.pl|13881
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.5861; 0.109426; 0.2908; 12.2714; 0.285034;
4839 7556 transmembrane_helix
ID metaerg.pl|13882
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.5861; 0.109426; 0.2908; 12.2714; 0.285034;
topology i4857-4925o;
7735 8127 CDS
ID metaerg.pl|13883
allko_ids K00849;
kegg_pathway_id 00052;
kegg_pathway_name Galactose metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.5861; 0.109426; 0.2908; 12.2714; 0.285034;
sp YES;
7735 7926 signal_peptide
ID metaerg.pl|13884
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.5861; 0.109426; 0.2908; 12.2714; 0.285034;
>Feature NODE_12902_length_8016_cov_4.94536
194 3 CDS
ID metaerg.pl|13885
allgo_ids GO:0016020; GO:0055070;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas;s__Cellulomonas fimi;
genomedb_acc GCF_000212695.1;
genomedb_target db:genomedb|GCF_000212695.1|WP_013770837.1 1 64 evalue:9.5e-19 qcov:100.00 identity:81.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 8.1973; ; ; 8.19743;
pfam_acc PF11382;
pfam_desc Copper transport outer membrane protein, MctB;
pfam_id MctB;
pfam_target db:Pfam-A.hmm|PF11382.8 evalue:2.1e-25 score:89.3 best_domain_score:89.3 name:MctB;
sp YES;
tm_num 1;
3 77 signal_peptide
ID metaerg.pl|13886
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 8.1973; ; ; 8.19743;
194 3 transmembrane_helix
ID metaerg.pl|13887
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 8.1973; ; ; 8.19743;
topology i21-89o;
1368 229 CDS
ID metaerg.pl|13888
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea bogoriensis;
genomedb_acc GCF_000767165.1;
genomedb_target db:genomedb|GCF_000767165.1|WP_035062408.1 1 377 evalue:5.9e-177 qcov:99.50 identity:85.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 8.1973; ; ; 8.19743;
pfam_acc PF12555;
pfam_desc Thiamine pyrophosphokinase C terminal;
pfam_id TPPK_C;
pfam_target db:Pfam-A.hmm|PF12555.8 evalue:2.4e-17 score:61.9 best_domain_score:60.8 name:TPPK_C;
tm_num 1;
1368 229 transmembrane_helix
ID metaerg.pl|13889
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 8.1973; ; ; 8.19743;
topology i1207-1275o;
3144 1423 CDS
ID metaerg.pl|13890
allgo_ids GO:0005524; GO:0000724; GO:0009314; GO:0009432;
allko_ids K03631;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea sp000526515;
genomedb_acc GCF_000526515.1;
genomedb_target db:genomedb|GCF_000526515.1|WP_024288656.1 1 573 evalue:8.9e-217 qcov:100.00 identity:74.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 8.1973; ; ; 8.19743;
pfam_acc PF13476; PF02463;
pfam_desc AAA domain; RecF/RecN/SMC N terminal domain;
pfam_id AAA_23; SMC_N;
pfam_target db:Pfam-A.hmm|PF13476.6 evalue:4.3e-09 score:36.4 best_domain_score:35.7 name:AAA_23; db:Pfam-A.hmm|PF02463.19 evalue:1.8e-13 score:49.7 best_domain_score:49.0 name:SMC_N;
sprot_desc DNA repair protein RecN;
sprot_id sp|Q9S220|RECN_STRCO;
sprot_target db:uniprot_sprot|sp|Q9S220|RECN_STRCO 5 573 evalue:6.2e-116 qcov:99.30 identity:47.80;
tigrfam_acc TIGR00634;
tigrfam_desc DNA repair protein RecN;
tigrfam_mainrole DNA metabolism;
tigrfam_name recN;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00634 evalue:3.7e-150 score:500.7 best_domain_score:500.5 name:TIGR00634;
4079 3141 CDS
ID metaerg.pl|13891
allec_ids 2.7.1.23;
allgo_ids GO:0003951; GO:0006741; GO:0005737; GO:0005524; GO:0046872; GO:0019674;
allko_ids K00858;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea sp000526515;
genomedb_acc GCF_000526515.1;
genomedb_target db:genomedb|GCF_000526515.1|WP_024288657.1 1 282 evalue:3.3e-125 qcov:90.40 identity:81.20;
kegg_pathway_id 00760;
kegg_pathway_name Nicotinate and nicotinamide metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 8.1973; ; ; 8.19743;
metacyc_pathway_id PWY-5083; NADPHOS-DEPHOS-PWY;
metacyc_pathway_name NAD/NADH phosphorylation and dephosphorylation;; NAD phosphorylation and dephosphorylation;;
metacyc_pathway_type NAD-Metabolism;; NAD-Metabolism;;
pfam_acc PF01513;
pfam_desc ATP-NAD kinase;
pfam_id NAD_kinase;
pfam_target db:Pfam-A.hmm|PF01513.21 evalue:6e-55 score:185.7 best_domain_score:185.5 name:NAD_kinase;
sprot_desc NAD kinase;
sprot_id sp|Q47NA3|NADK_THEFY;
sprot_target db:uniprot_sprot|sp|Q47NA3|NADK_THEFY 5 279 evalue:2.6e-84 qcov:88.10 identity:56.70;
4969 4079 CDS
ID metaerg.pl|13892
allec_ids 2.1.1.226;
allgo_ids GO:0008168; GO:0032259; GO:0005618; GO:0005737; GO:0005576; GO:0020002; GO:0016020; GO:0003723; GO:0090729; GO:0044179; GO:0006364;
allko_ids K06442;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea sp000526515;
genomedb_acc GCF_000526515.1;
genomedb_target db:genomedb|GCF_000526515.1|WP_081785108.1 8 293 evalue:4.2e-77 qcov:96.60 identity:57.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 8.1973; ; ; 8.19743;
pfam_acc PF01728; PF01479;
pfam_desc FtsJ-like methyltransferase; S4 domain;
pfam_id FtsJ; S4;
pfam_target db:Pfam-A.hmm|PF01728.19 evalue:1.9e-18 score:66.5 best_domain_score:66.0 name:FtsJ; db:Pfam-A.hmm|PF01479.25 evalue:2.9e-09 score:35.7 best_domain_score:34.3 name:S4;
sprot_desc 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA;
sprot_id sp|P9WJ62|TLYA_MYCTO;
sprot_target db:uniprot_sprot|sp|P9WJ62|TLYA_MYCTO 6 279 evalue:3.7e-56 qcov:92.60 identity:49.30;
6258 5236 CDS
ID metaerg.pl|13893
allec_ids 3.1.3.21;
allgo_ids GO:0050897; GO:0000121; GO:0000287; GO:0030145; GO:0016791; GO:0042803; GO:0006071; GO:0046475;
allko_ids K06117;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea sp000526515;
genomedb_acc GCF_000526515.1;
genomedb_target db:genomedb|GCF_000526515.1|WP_024288659.1 1 337 evalue:2.0e-128 qcov:99.10 identity:72.70;
kegg_pathway_id 00561;
kegg_pathway_name Glycerolipid metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 8.1973; ; ; 8.19743;
pfam_acc PF13344; PF13242;
pfam_desc Haloacid dehalogenase-like hydrolase; HAD-hyrolase-like;
pfam_id Hydrolase_6; Hydrolase_like;
pfam_target db:Pfam-A.hmm|PF13344.6 evalue:1.3e-21 score:75.9 best_domain_score:75.1 name:Hydrolase_6; db:Pfam-A.hmm|PF13242.6 evalue:1.8e-16 score:59.2 best_domain_score:56.8 name:Hydrolase_like;
sprot_desc D,L-glycerol 3-phosphate phosphatase;
sprot_id sp|O33194|G3PP_MYCTU;
sprot_target db:uniprot_sprot|sp|O33194|G3PP_MYCTU 7 332 evalue:1.6e-58 qcov:95.90 identity:44.80;
tigrfam_acc TIGR01460; TIGR01549;
tigrfam_desc HAD hydrolase, family IIA; HAD hydrolase, family IA, variant 1;
tigrfam_mainrole Unknown function; Unknown function;
tigrfam_name HAD-SF-IIA; HAD-SF-IA-v1;
tigrfam_sub1role Enzymes of unknown specificity; Enzymes of unknown specificity;
tigrfam_target db:TIGRFAMs.hmm|TIGR01460 evalue:1.7e-32 score:112.3 best_domain_score:111.9 name:TIGR01460; db:TIGRFAMs.hmm|TIGR01549 evalue:2.3e-06 score:27.3 best_domain_score:25.0 name:TIGR01549;
6953 6258 CDS
ID metaerg.pl|13894
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Cellulomonadaceae;g__Actinotalea;s__Actinotalea sp000526515;
genomedb_acc GCF_000526515.1;
genomedb_target db:genomedb|GCF_000526515.1|WP_081785109.1 1 231 evalue:1.2e-74 qcov:100.00 identity:69.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 8.1973; ; ; 8.19743;
7615 7503 bac_5SrRNA
ID metaerg.pl|13895
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 8.1973; ; ; 8.19743;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
8016 7693 bac_23SrRNA
ID metaerg.pl|13896
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 8.1973; ; ; 8.19743;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JAGF01000001.4094467.4097563 1 324 evalue:2.20e-159 qcov:100 identity:98.148;
rRNA_taxon Bacteria;Actinobacteria;Actinobacteria;Micrococcales;Cellulomonadaceae;Actinotalea;
>Feature NODE_13374_length_7822_cov_18.064
3 917 CDS
ID metaerg.pl|13897
allec_ids 1.6.-.-;
allgo_ids GO:0016491; GO:0055114; GO:0003955; GO:0019646;
allko_ids K03885; K00356;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus daliensis;
genomedb_acc GCF_900103955.1;
genomedb_target db:genomedb|GCF_900103955.1|WP_090843884.1 1 304 evalue:4.8e-153 qcov:100.00 identity:88.80;
kegg_pathway_id 00190;
kegg_pathway_name Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
pfam_acc PF00070; PF07992;
pfam_desc Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF00070.27 evalue:3e-07 score:30.1 best_domain_score:28.5 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.1e-33 score:116.0 best_domain_score:115.7 name:Pyr_redox_2;
sprot_desc NADH dehydrogenase-like protein YumB;
sprot_id sp|O05267|YUMB_BACSU;
sprot_target db:uniprot_sprot|sp|O05267|YUMB_BACSU 1 304 evalue:1.3e-96 qcov:100.00 identity:57.10;
1319 1639 CDS
ID metaerg.pl|13898
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus daliensis;
genomedb_acc GCF_900103955.1;
genomedb_target db:genomedb|GCF_900103955.1|WP_090843885.1 1 106 evalue:1.2e-37 qcov:100.00 identity:80.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
pfam_acc PF14068;
pfam_desc Putative membrane protein;
pfam_id YuiB;
pfam_target db:Pfam-A.hmm|PF14068.6 evalue:7e-42 score:141.4 best_domain_score:141.2 name:YuiB;
tm_num 3;
1319 1639 transmembrane_helix
ID metaerg.pl|13899
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
topology o1337-1405i1424-1492o1535-1603i;
2160 1681 CDS
ID metaerg.pl|13900
allgo_ids GO:0016021; GO:0005886;
allko_ids K09775;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus daliensis;
genomedb_acc GCF_900103955.1;
genomedb_target db:genomedb|GCF_900103955.1|WP_090843886.1 1 159 evalue:2.5e-76 qcov:100.00 identity:93.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
pfam_acc PF02681;
pfam_desc Divergent PAP2 family;
pfam_id DUF212;
pfam_target db:Pfam-A.hmm|PF02681.14 evalue:3.7e-48 score:162.1 best_domain_score:161.8 name:DUF212;
sprot_desc Uncharacterized membrane protein YuiD;
sprot_id sp|O32107|YUID_BACSU;
sprot_target db:uniprot_sprot|sp|O32107|YUID_BACSU 1 157 evalue:4.3e-51 qcov:98.70 identity:66.20;
tm_num 3;
2160 1681 transmembrane_helix
ID metaerg.pl|13901
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
topology i1699-1767o1885-1944i2095-2154o;
2598 3176 CDS
ID metaerg.pl|13902
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus daliensis;
genomedb_acc GCF_900103955.1;
genomedb_target db:genomedb|GCF_900103955.1|WP_090843897.1 5 192 evalue:5.6e-91 qcov:97.90 identity:91.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
pfam_acc PF04290;
pfam_desc Tripartite ATP-independent periplasmic transporters, DctQ component;
pfam_id DctQ;
pfam_target db:Pfam-A.hmm|PF04290.12 evalue:2.8e-22 score:78.3 best_domain_score:78.3 name:DctQ;
tm_num 5;
2598 3176 transmembrane_helix
ID metaerg.pl|13903
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
topology o2610-2669i2706-2774o2802-2855i2922-2990o3033-3101i;
3208 4485 CDS
ID metaerg.pl|13904
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus daliensis;
genomedb_acc GCF_900103955.1;
genomedb_target db:genomedb|GCF_900103955.1|WP_090843887.1 1 425 evalue:1.6e-202 qcov:100.00 identity:91.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
pfam_acc PF06808;
pfam_desc Tripartite ATP-independent periplasmic transporter, DctM component;
pfam_id DctM;
pfam_target db:Pfam-A.hmm|PF06808.12 evalue:8.5e-111 score:369.9 best_domain_score:369.7 name:DctM;
sprot_desc Ectoine/5-hydroxyectoine TRAP transporter large permease protein UehC;
sprot_id sp|Q5LUA9|UEHC_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LUA9|UEHC_RUEPO 1 421 evalue:9.2e-125 qcov:99.10 identity:57.40;
tigrfam_acc TIGR00786;
tigrfam_desc TRAP transporter, DctM subunit;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctM;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00786 evalue:1e-105 score:353.0 best_domain_score:352.7 name:TIGR00786;
tm_num 10;
3208 4485 transmembrane_helix
ID metaerg.pl|13905
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
topology i3220-3288o3331-3399i3622-3690o3718-3786i3847-3915o3928-3987i4024-4092o4120-4188i4207-4266o4405-4473i;
4542 5783 CDS
ID metaerg.pl|13906
allgo_ids GO:0055085; GO:0042597; GO:0015556; GO:0015740;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus daliensis;
genomedb_acc GCF_900103955.1;
genomedb_target db:genomedb|GCF_900103955.1|WP_090843888.1 1 412 evalue:7.9e-191 qcov:99.80 identity:86.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
pfam_acc PF03480;
pfam_desc Bacterial extracellular solute-binding protein, family 7;
pfam_id DctP;
pfam_target db:Pfam-A.hmm|PF03480.13 evalue:3.1e-82 score:275.4 best_domain_score:275.0 name:DctP;
sp YES;
sprot_desc Ectoine/5-hydroxyectoine-binding periplasmic protein UehA;
sprot_id sp|Q5LUA7|UEHA_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LUA7|UEHA_RUEPO 65 372 evalue:1.2e-49 qcov:74.60 identity:35.60;
tigrfam_acc TIGR00787;
tigrfam_desc TRAP transporter solute receptor, DctP family;
tigrfam_mainrole Transport and binding proteins;
tigrfam_name dctP;
tigrfam_sub1role Carbohydrates, organic alcohols, and acids;
tigrfam_target db:TIGRFAMs.hmm|TIGR00787 evalue:2.9e-55 score:186.6 best_domain_score:186.2 name:TIGR00787;
4542 4601 lipoprotein_signal_peptide
ID metaerg.pl|13907
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
6521 5937 CDS
ID metaerg.pl|13908
allgo_ids GO:0005886; GO:0015225; GO:0015878; GO:0016021;
allko_ids K03523;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus daliensis;
genomedb_acc GCF_900103955.1;
genomedb_target db:genomedb|GCF_900103955.1|WP_090843889.1 1 193 evalue:5.3e-65 qcov:99.50 identity:69.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
pfam_acc PF02632;
pfam_desc BioY family;
pfam_id BioY;
pfam_target db:Pfam-A.hmm|PF02632.14 evalue:1.3e-29 score:102.2 best_domain_score:102.2 name:BioY;
sprot_desc Probable biotin transporter BioY;
sprot_id sp|O57898|BIOY_PYRHO;
sprot_target db:uniprot_sprot|sp|O57898|BIOY_PYRHO 7 147 evalue:2.9e-17 qcov:72.70 identity:44.80;
tm_num 5;
6521 5937 transmembrane_helix
ID metaerg.pl|13909
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
topology i5973-6044o6102-6170i6189-6257o6285-6353i6360-6428o;
7412 7822 bac_16SrRNA
ID metaerg.pl|13910
Name bac_16SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.114833; 24.4365; 2.80996; ; 27.3613;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KF836171.1.1532 7 411 evalue:0.0 qcov:99 identity:98.765;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;Sporolactobacillaceae;Alkalicoccus;
>Feature NODE_13418_length_7802_cov_17.1113
658 2 CDS
ID metaerg.pl|13911
allec_ids 7.1.2.2;
allgo_ids GO:0005524; GO:0005886; GO:0045261; GO:0046933; GO:0015986;
allko_ids K02112;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Rhodanobacteraceae;g__SNC69-320;s__SNC69-320 sp001725155;
genomedb_acc GCA_001725155.1;
genomedb_target db:genomedb|GCA_001725155.1|ODU30969.1 1 219 evalue:4.9e-107 qcov:100.00 identity:89.50;
kegg_pathway_id 00190; 00195;
kegg_pathway_name Oxidative phosphorylation; Photosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
pfam_acc PF00006; PF02874;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta family, beta-barrel domain;
pfam_id ATP-synt_ab; ATP-synt_ab_N;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:2.8e-19 score:68.8 best_domain_score:68.4 name:ATP-synt_ab; db:Pfam-A.hmm|PF02874.23 evalue:7.2e-21 score:73.7 best_domain_score:72.8 name:ATP-synt_ab_N;
sprot_desc ATP synthase subunit beta;
sprot_id sp|A4VS62|ATPB_PSEU5;
sprot_target db:uniprot_sprot|sp|A4VS62|ATPB_PSEU5 1 219 evalue:1.4e-105 qcov:100.00 identity:86.30;
1562 699 CDS
ID metaerg.pl|13912
allec_ids 3.6.3.14;
allgo_ids GO:0015986; GO:0045261; GO:0046933; GO:0005886; GO:0005524; GO:0042777;
allko_ids K02115;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas donghaensis;
genomedb_acc GCF_000743535.1;
genomedb_target db:genomedb|GCF_000743535.1|WP_034221533.1 1 287 evalue:6.1e-126 qcov:100.00 identity:80.50;
kegg_pathway_id 00195; 00190;
kegg_pathway_name Photosynthesis; Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
metacyc_pathway_id PRPP-PWY; PWY-6126; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00231;
pfam_desc ATP synthase;
pfam_id ATP-synt;
pfam_target db:Pfam-A.hmm|PF00231.19 evalue:3.3e-97 score:324.8 best_domain_score:324.5 name:ATP-synt;
sprot_desc ATP synthase gamma chain;
sprot_id sp|Q4UQF3|ATPG_XANC8;
sprot_target db:uniprot_sprot|sp|Q4UQF3|ATPG_XANC8 1 287 evalue:2.1e-120 qcov:100.00 identity:76.00;
tigrfam_acc TIGR01146;
tigrfam_desc ATP synthase F1, gamma subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATPsyn_F1gamma;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01146 evalue:1e-103 score:346.2 best_domain_score:346.1 name:TIGR01146;
3150 1603 CDS
ID metaerg.pl|13913
allec_ids 7.1.2.2; 3.6.3.14;
allgo_ids GO:0005524; GO:0005886; GO:0045261; GO:0046933; GO:0015986;
allko_ids K02111;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Aquimonas;s__Aquimonas voraii;
genomedb_acc GCF_900101825.1;
genomedb_target db:genomedb|GCF_900101825.1|WP_091241349.1 1 515 evalue:1.3e-251 qcov:100.00 identity:86.40;
kegg_pathway_id 00195; 00190;
kegg_pathway_name Photosynthesis; Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
metacyc_pathway_id PWY-6126; PRPP-PWY; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00006; PF00306; PF02874;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, beta-barrel domain;
pfam_id ATP-synt_ab; ATP-synt_ab_C; ATP-synt_ab_N;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:6.8e-73 score:244.1 best_domain_score:243.5 name:ATP-synt_ab; db:Pfam-A.hmm|PF00306.27 evalue:9.3e-43 score:144.8 best_domain_score:144.2 name:ATP-synt_ab_C; db:Pfam-A.hmm|PF02874.23 evalue:1e-11 score:44.4 best_domain_score:43.3 name:ATP-synt_ab_N;
sprot_desc ATP synthase subunit alpha;
sprot_id sp|B2FHZ0|ATPA_STRMK;
sprot_target db:uniprot_sprot|sp|B2FHZ0|ATPA_STRMK 1 515 evalue:4.7e-248 qcov:100.00 identity:83.50;
tigrfam_acc TIGR00962;
tigrfam_desc ATP synthase F1, alpha subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name atpA;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR00962 evalue:7.7e-246 score:815.7 best_domain_score:815.6 name:TIGR00962;
3747 3220 CDS
ID metaerg.pl|13914
allec_ids 3.6.3.14;
allgo_ids GO:0015986; GO:0046933; GO:0005886; GO:0045261;
allko_ids K02113;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas;s__Arenimonas sp003241895;
genomedb_acc GCA_003241895.1;
genomedb_target db:genomedb|GCA_003241895.1|PZO08221.1 1 175 evalue:1.5e-45 qcov:100.00 identity:61.40;
kegg_pathway_id 00190; 00195;
kegg_pathway_name Oxidative phosphorylation; Photosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
metacyc_pathway_id DENOVOPURINE2-PWY; PRPP-PWY; PWY-6126;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00213;
pfam_desc ATP synthase delta (OSCP) subunit;
pfam_id OSCP;
pfam_target db:Pfam-A.hmm|PF00213.18 evalue:5.2e-47 score:159.4 best_domain_score:159.2 name:OSCP;
sprot_desc ATP synthase subunit delta;
sprot_id sp|Q4UQF1|ATPD_XANC8;
sprot_target db:uniprot_sprot|sp|Q4UQF1|ATPD_XANC8 1 175 evalue:3.0e-45 qcov:100.00 identity:57.10;
tigrfam_acc TIGR01145;
tigrfam_desc ATP synthase F1, delta subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATP_synt_delta;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01145 evalue:8.6e-39 score:132.7 best_domain_score:132.5 name:TIGR01145;
4219 3749 CDS
ID metaerg.pl|13915
allec_ids 3.6.3.14;
allgo_ids GO:0015078; GO:0015986; GO:0045263; GO:0016021; GO:0005886; GO:0046933;
allko_ids K02109;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas sp001753645;
genomedb_acc GCF_001753645.1;
genomedb_target db:genomedb|GCF_001753645.1|WP_070208722.1 1 156 evalue:2.4e-55 qcov:100.00 identity:77.60;
kegg_pathway_id 00190; 00195;
kegg_pathway_name Oxidative phosphorylation; Photosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
metacyc_pathway_id PWY-6126; PRPP-PWY; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00430;
pfam_desc ATP synthase B/B' CF(0);
pfam_id ATP-synt_B;
pfam_target db:Pfam-A.hmm|PF00430.18 evalue:1e-27 score:96.0 best_domain_score:95.8 name:ATP-synt_B;
sprot_desc ATP synthase subunit b;
sprot_id sp|B4SJS3|ATPF_STRM5;
sprot_target db:uniprot_sprot|sp|B4SJS3|ATPF_STRM5 1 156 evalue:6.5e-36 qcov:100.00 identity:81.40;
tigrfam_acc TIGR01144;
tigrfam_desc ATP synthase F0, B subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATP_synt_b;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01144 evalue:8.1e-40 score:135.2 best_domain_score:135.1 name:TIGR01144;
tm_num 1;
4219 3749 transmembrane_helix
ID metaerg.pl|13916
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
topology i3767-3835o;
4595 4323 CDS
ID metaerg.pl|13917
allec_ids 3.6.3.14;
allgo_ids GO:0015078; GO:0033177; GO:0016021; GO:0005886; GO:0045263; GO:0008289; GO:0046933; GO:0015991; GO:0015986;
allko_ids K00872; K02110; K02124; K02155; K02128; K03661;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Silanimonas;s__Silanimonas lenta;
genomedb_acc GCF_000429065.1;
genomedb_target db:genomedb|GCF_000429065.1|WP_028770644.1 1 89 evalue:2.9e-29 qcov:98.90 identity:87.60;
kegg_pathway_id 05012; 00190; 00260; 00195;
kegg_pathway_name Parkinson's disease; Oxidative phosphorylation; Glycine, serine and threonine metabolism; Photosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
metacyc_pathway_id PRPP-PWY; PWY-6126; DENOVOPURINE2-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of purine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00137;
pfam_desc ATP synthase subunit C;
pfam_id ATP-synt_C;
pfam_target db:Pfam-A.hmm|PF00137.21 evalue:6.3e-08 score:32.1 best_domain_score:31.3 name:ATP-synt_C;
sprot_desc ATP synthase subunit c;
sprot_id sp|B9MB98|ATPL_ACIET;
sprot_target db:uniprot_sprot|sp|B9MB98|ATPL_ACIET 7 88 evalue:2.3e-17 qcov:91.10 identity:62.20;
tigrfam_acc TIGR01260;
tigrfam_desc ATP synthase F0, C subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATP_synt_c;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01260 evalue:1.1e-21 score:75.8 best_domain_score:75.8 name:TIGR01260;
tm_num 2;
4595 4323 transmembrane_helix
ID metaerg.pl|13918
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
topology o4365-4433i4494-4562o;
5475 4654 CDS
ID metaerg.pl|13919
allec_ids 3.6.3.14;
allgo_ids GO:0015078; GO:0015986; GO:0045263; GO:0016021; GO:0005886; GO:0046933;
allko_ids K12524; K02126; K02108;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Stenotrophomonas;s__Stenotrophomonas bentonitica;
genomedb_acc GCF_002887735.1;
genomedb_target db:genomedb|GCF_002887735.1|WP_046273137.1 5 273 evalue:5.5e-108 qcov:98.50 identity:72.90;
kegg_pathway_id 00195; 05012; 00190;
kegg_pathway_name Photosynthesis; Parkinson's disease; Oxidative phosphorylation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
metacyc_pathway_id DENOVOPURINE2-PWY; PRPP-PWY; PWY-6126;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00119;
pfam_desc ATP synthase A chain;
pfam_id ATP-synt_A;
pfam_target db:Pfam-A.hmm|PF00119.20 evalue:5e-55 score:185.9 best_domain_score:185.7 name:ATP-synt_A;
sprot_desc ATP synthase subunit a;
sprot_id sp|Q82XQ4|ATP6_NITEU;
sprot_target db:uniprot_sprot|sp|Q82XQ4|ATP6_NITEU 2 273 evalue:3.1e-65 qcov:99.60 identity:43.90;
tigrfam_acc TIGR01131;
tigrfam_desc ATP synthase F0, A subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATP_synt_6_or_A;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01131 evalue:2.2e-41 score:141.4 best_domain_score:141.0 name:TIGR01131;
tm_num 6;
5475 4654 transmembrane_helix
ID metaerg.pl|13920
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
topology o4732-4800i4903-4962o5077-5145i5179-5247o5305-5373i5392-5460o;
5850 5491 CDS
ID metaerg.pl|13921
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter;s__Lysobacter sp001429785;
genomedb_acc GCF_001429785.1;
genomedb_target db:genomedb|GCF_001429785.1|WP_082576590.1 1 110 evalue:5.1e-10 qcov:92.40 identity:44.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
pfam_acc PF03899;
pfam_desc ATP synthase I chain;
pfam_id ATP-synt_I;
pfam_target db:Pfam-A.hmm|PF03899.15 evalue:4.7e-06 score:26.1 best_domain_score:26.1 name:ATP-synt_I;
sp YES;
tm_num 4;
5491 5592 signal_peptide
ID metaerg.pl|13922
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
5850 5491 transmembrane_helix
ID metaerg.pl|13923
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
topology i5524-5583o5593-5661i5698-5766o5776-5835i;
6049 6429 CDS
ID metaerg.pl|13924
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__UBA11164;s__UBA11164 sp002420085;
genomedb_acc GCA_002420085.1;
genomedb_target db:genomedb|GCA_002420085.1|DIHI01000121.1_6 1 124 evalue:1.9e-31 qcov:98.40 identity:58.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
pfam_acc PF01124;
pfam_desc MAPEG family;
pfam_id MAPEG;
pfam_target db:Pfam-A.hmm|PF01124.18 evalue:2.7e-26 score:91.2 best_domain_score:91.0 name:MAPEG;
sp YES;
tm_num 4;
6049 6120 signal_peptide
ID metaerg.pl|13925
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
6049 6429 transmembrane_helix
ID metaerg.pl|13926
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
topology o6058-6114i6196-6264o6292-6345i6364-6423o;
6751 6640 bac_5SrRNA
ID metaerg.pl|13927
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
7800 6885 bac_23SrRNA
ID metaerg.pl|13928
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.317825; 18.3061; 1.07906; 0.140094; 19.843;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LASZ01000027.319.3213 4 916 evalue:0.0 qcov:99 identity:96.937;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;
>Feature NODE_13457_length_7789_cov_10.9072
266 3 CDS
ID metaerg.pl|13929
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.8099; ; 16.8101; ; ;
1017 1208 CDS
ID metaerg.pl|13930
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.8099; ; 16.8101; ; ;
1854 1961 arc_5SrRNA
ID metaerg.pl|13931
Name arc_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.8099; ; 16.8101; ; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
3226 3639 CDS
ID metaerg.pl|13932
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.8099; ; 16.8101; ; ;
4788 4219 CDS
ID metaerg.pl|13933
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.8099; ; 16.8101; ; ;
5281 4781 CDS
ID metaerg.pl|13934
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.8099; ; 16.8101; ; ;
6040 6294 CDS
ID metaerg.pl|13935
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.8099; ; 16.8101; ; ;
6961 6494 CDS
ID metaerg.pl|13936
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.8099; ; 16.8101; ; ;
7366 7013 CDS
ID metaerg.pl|13937
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.8099; ; 16.8101; ; ;
7435 7788 CDS
ID metaerg.pl|13938
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 16.8099; ; 16.8101; ; ;
>Feature NODE_13787_length_7669_cov_45.9159
730 95 CDS
ID metaerg.pl|13939
allgo_ids GO:1990397;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071467913.1 1 211 evalue:1.5e-108 qcov:100.00 identity:94.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
pfam_acc PF02592;
pfam_desc Putative vitamin uptake transporter;
pfam_id Vut_1;
pfam_target db:Pfam-A.hmm|PF02592.15 evalue:2.2e-37 score:127.9 best_domain_score:127.9 name:Vut_1;
tigrfam_acc TIGR00697;
tigrfam_desc conserved hypothetical integral membrane protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00697;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00697 evalue:8.3e-28 score:96.7 best_domain_score:92.1 name:TIGR00697;
tm_num 6;
730 95 transmembrane_helix
ID metaerg.pl|13940
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
topology i107-175o185-253i272-340o353-421i482-550o635-703i;
2567 912 CDS
ID metaerg.pl|13941
allec_ids 3.1.3.5;
allgo_ids GO:0009166; GO:0016787; GO:0031225; GO:0008253; GO:0046872; GO:0000166;
allko_ids K08077; K01119; K08693; K01081; K11751; K06931;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479545.1 1 551 evalue:2.3e-270 qcov:100.00 identity:85.10;
kegg_pathway_id 00240; 00230; 00760;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism; Nicotinate and nicotinamide metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
metacyc_pathway_id PWY-5044; PWY-5695; PWY-5381; URSIN-PWY; PWY-6353;
metacyc_pathway_name purine nucleotides degradation I (plants);; inosine 5'-phosphate degradation;; pyridine nucleotide cycling (plants);; ureide biosynthesis;; purine nucleotides degradation II (aerobic);;
metacyc_pathway_type Purine-Degradation; Super-Pathways;; Purine-Degradation;; NAD-Metabolism;; Polyamine-Biosynthesis; Super-Pathways;; Purine-Degradation; Super-Pathways;;
pfam_acc PF02872; PF00149;
pfam_desc 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase;
pfam_id 5_nucleotid_C; Metallophos;
pfam_target db:Pfam-A.hmm|PF02872.18 evalue:2.4e-41 score:140.8 best_domain_score:139.8 name:5_nucleotid_C; db:Pfam-A.hmm|PF00149.28 evalue:3.7e-07 score:30.1 best_domain_score:29.6 name:Metallophos;
sp YES;
sprot_desc Snake venom 5'-nucleotidase;
sprot_id sp|B6EWW8|V5NTD_GLOBR;
sprot_target db:uniprot_sprot|sp|B6EWW8|V5NTD_GLOBR 31 550 evalue:8.1e-89 qcov:94.40 identity:35.20;
912 1025 signal_peptide
ID metaerg.pl|13942
Note TAT;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
3593 2709 CDS
ID metaerg.pl|13943
allec_ids 3.4.24.-;
allgo_ids GO:0004252; GO:0006508; GO:0030288; GO:0046872; GO:0008237;
allko_ids K07261;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479546.1 1 294 evalue:4.6e-161 qcov:100.00 identity:92.90;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
pfam_acc PF03411;
pfam_desc Penicillin-insensitive murein endopeptidase;
pfam_id Peptidase_M74;
pfam_target db:Pfam-A.hmm|PF03411.13 evalue:5.3e-97 score:323.3 best_domain_score:323.1 name:Peptidase_M74;
sp YES;
sprot_desc Penicillin-insensitive murein endopeptidase;
sprot_id sp|P44566|MEPA_HAEIN;
sprot_target db:uniprot_sprot|sp|P44566|MEPA_HAEIN 41 293 evalue:1.4e-44 qcov:86.10 identity:38.70;
2709 2777 signal_peptide
ID metaerg.pl|13944
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
4999 3569 CDS
ID metaerg.pl|13945
allgo_ids GO:0016021; GO:0055085; GO:0005886;
allko_ids K06902; K08219; K08217;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468182.1 24 476 evalue:4.3e-233 qcov:95.20 identity:90.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
pfam_acc PF11700; PF07690;
pfam_desc Vacuole effluxer Atg22 like; Major Facilitator Superfamily;
pfam_id ATG22; MFS_1;
pfam_target db:Pfam-A.hmm|PF11700.8 evalue:1e-37 score:129.2 best_domain_score:101.4 name:ATG22; db:Pfam-A.hmm|PF07690.16 evalue:4.9e-16 score:57.8 best_domain_score:43.9 name:MFS_1;
sprot_desc Uncharacterized MFS-type transporter YxiO;
sprot_id sp|P42306|YXIO_BACSU;
sprot_target db:uniprot_sprot|sp|P42306|YXIO_BACSU 34 463 evalue:3.3e-30 qcov:90.30 identity:27.00;
tm_num 12;
4999 3569 transmembrane_helix
ID metaerg.pl|13946
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
topology i3698-3754o3782-3850i3875-3934o3962-4030i4067-4135o4214-4282i4376-4444o4472-4540i4577-4645o4688-4747i4808-4876o4889-4948i;
5676 5191 CDS
ID metaerg.pl|13947
allgo_ids GO:0005615; GO:0030288;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071479548.1 1 161 evalue:5.8e-73 qcov:100.00 identity:90.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
pfam_acc PF02469;
pfam_desc Fasciclin domain;
pfam_id Fasciclin;
pfam_target db:Pfam-A.hmm|PF02469.22 evalue:1.7e-37 score:127.7 best_domain_score:127.4 name:Fasciclin;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P74615|Y1483_SYNY3;
sprot_target db:uniprot_sprot|sp|P74615|Y1483_SYNY3 14 160 evalue:3.8e-31 qcov:91.30 identity:51.50;
5191 5259 signal_peptide
ID metaerg.pl|13948
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
6314 5871 CDS
ID metaerg.pl|13949
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468181.1 1 147 evalue:1.1e-67 qcov:100.00 identity:87.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
pfam_acc PF03625;
pfam_desc Domain of unknown function DUF302;
pfam_id DUF302;
pfam_target db:Pfam-A.hmm|PF03625.14 evalue:1.5e-06 score:27.2 best_domain_score:26.5 name:DUF302;
sp YES;
5871 5930 signal_peptide
ID metaerg.pl|13950
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
6912 7669 bac_16SrRNA
ID metaerg.pl|13951
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 127.432; 1.6574; 118.447; 4.56843; 2.75968;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|DQ659236.1.1450 8 758 evalue:0.0 qcov:99 identity:98.136;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseinatronobacter;
>Feature NODE_14028_length_7572_cov_51.0915
331 445 bac_5SrRNA
ID metaerg.pl|13952
Name bac_5SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
896 2287 CDS
ID metaerg.pl|13953
allgo_ids GO:0016787;
allko_ids K01468;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_026072432.1 1 462 evalue:3.8e-202 qcov:99.80 identity:79.00;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:8.9e-37 score:126.4 best_domain_score:126.1 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:1.4e-20 score:73.5 best_domain_score:46.2 name:Amidohydro_3;
sp YES;
tm_num 1;
896 973 signal_peptide
ID metaerg.pl|13954
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
896 2287 transmembrane_helix
ID metaerg.pl|13955
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
topology i908-976o;
3599 2466 CDS
ID metaerg.pl|13956
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_017297755.1 1 377 evalue:4.7e-174 qcov:100.00 identity:82.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
sp YES;
tm_num 1;
2466 2552 signal_peptide
ID metaerg.pl|13957
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
3599 2466 transmembrane_helix
ID metaerg.pl|13958
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
topology i2484-2552o;
4755 5153 CDS
ID metaerg.pl|13959
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
sp YES;
tm_num 1;
4755 4838 signal_peptide
ID metaerg.pl|13960
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
4755 5153 transmembrane_helix
ID metaerg.pl|13961
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
topology i4773-4841o;
5164 5373 CDS
ID metaerg.pl|13962
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea sp003022385;
genomedb_acc GCF_003022385.1;
genomedb_target db:genomedb|GCF_003022385.1|WP_106921179.1 1 61 evalue:2.1e-24 qcov:88.40 identity:91.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
5690 6871 CDS
ID metaerg.pl|13963
allgo_ids GO:0016787;
allko_ids K01442;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methyloligellaceae;g__Methyloligella;s__Methyloligella halotolerans;
genomedb_acc GCF_001708935.1;
genomedb_target db:genomedb|GCF_001708935.1|WP_069094763.1 30 388 evalue:2.4e-112 qcov:91.30 identity:56.40;
kegg_pathway_id 00120;
kegg_pathway_name Bile acid biosynthesis;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
pfam_acc PF02275;
pfam_desc Linear amide C-N hydrolases, choloylglycine hydrolase family;
pfam_id CBAH;
pfam_target db:Pfam-A.hmm|PF02275.18 evalue:3.7e-46 score:157.5 best_domain_score:156.7 name:CBAH;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P54948|YXEI_BACSU;
sprot_target db:uniprot_sprot|sp|P54948|YXEI_BACSU 30 305 evalue:4.1e-26 qcov:70.20 identity:27.90;
tm_num 1;
5690 5776 signal_peptide
ID metaerg.pl|13964
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
5690 6871 transmembrane_helix
ID metaerg.pl|13965
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
topology i5708-5776o;
6998 7570 CDS
ID metaerg.pl|13966
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 83.7239; 7.52021; 2.96995; 95.8398; 1.62571;
>Feature NODE_16271_length_6854_cov_5.64465
33 1385 CDS
ID metaerg.pl|13967
allgo_ids GO:0016787;
allko_ids K01468;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Algoriphagus;s__Algoriphagus marincola;
genomedb_acc GCF_000429405.1;
genomedb_target db:genomedb|GCF_000429405.1|WP_026946584.1 7 427 evalue:7.3e-150 qcov:93.60 identity:61.10;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:1.1e-15 score:57.1 best_domain_score:41.1 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:5.1e-12 score:45.2 best_domain_score:28.7 name:Amidohydro_3;
sp YES;
33 104 signal_peptide
ID metaerg.pl|13968
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
1397 2692 CDS
ID metaerg.pl|13969
allgo_ids GO:0016787;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__BBD-1991-12;s__BBD-1991-12 sp001657315;
genomedb_acc GCA_001657315.1;
genomedb_target db:genomedb|GCA_001657315.1|LYSV01000006.1_51 30 428 evalue:2.4e-134 qcov:92.60 identity:58.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:3.9e-11 score:42.1 best_domain_score:40.2 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:2.5e-09 score:36.3 best_domain_score:31.8 name:Amidohydro_3;
sp YES;
tm_num 1;
1397 1459 signal_peptide
ID metaerg.pl|13970
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
1397 2692 transmembrane_helix
ID metaerg.pl|13971
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
topology i1409-1468o;
2718 3761 CDS
ID metaerg.pl|13972
allec_ids 3.5.4.26; 1.1.1.193; 3.5.4.26 1.1.1.193;
allgo_ids GO:0002100; GO:0008251; GO:0008703; GO:0008835; GO:0050661; GO:0008270; GO:0009231;
allko_ids K11752;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Dysgonomonadaceae;g__Proteiniphilum;s__Proteiniphilum acetatigenes;
genomedb_acc GCF_000380985.1;
genomedb_target db:genomedb|GCF_000380985.1|WP_019538378.1 5 320 evalue:1.7e-77 qcov:91.10 identity:48.50;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
metacyc_pathway_id RIBOSYN2-PWY;
metacyc_pathway_name flavin biosynthesis I (bacteria and plants);;
metacyc_pathway_type Flavin-Biosynthesis;;
pfam_acc PF00383; PF14437; PF01872;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase; RibD C-terminal domain;
pfam_id dCMP_cyt_deam_1; MafB19-deam; RibD_C;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:2.1e-18 score:65.3 best_domain_score:64.8 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:3.5e-09 score:35.8 best_domain_score:35.2 name:MafB19-deam; db:Pfam-A.hmm|PF01872.17 evalue:4.5e-21 score:74.8 best_domain_score:73.8 name:RibD_C;
sprot_desc Riboflavin biosynthesis protein RibD;
sprot_id sp|O66534|RIBD_AQUAE;
sprot_target db:uniprot_sprot|sp|O66534|RIBD_AQUAE 3 338 evalue:3.7e-55 qcov:96.80 identity:37.50;
tigrfam_acc TIGR00326;
tigrfam_desc riboflavin biosynthesis protein RibD;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name eubact_ribD;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00326 evalue:7e-70 score:235.1 best_domain_score:234.8 name:TIGR00326;
3848 4612 CDS
ID metaerg.pl|13973
allec_ids 2.4.-.-;
allgo_ids GO:0016757; GO:0009244;
allko_ids K00698; K12997; K12984; K00721;
genomedb_OC d__Bacteria;p__Desulfobacterota_A;c__Desulfovibrionia;o__Desulfovibrionales;f__Desulfovibrionaceae;g__Desulfocurvibacter;s__Desulfocurvibacter africanus;
genomedb_acc GCF_000422545.1;
genomedb_target db:genomedb|GCF_000422545.1|WP_027367912.1 4 251 evalue:1.3e-74 qcov:97.60 identity:55.60;
kegg_pathway_id 00510; 00530;
kegg_pathway_name N-Glycan biosynthesis; Aminosugars metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
metacyc_pathway_id LPSSYN-PWY; LIPA-CORESYN-PWY;
metacyc_pathway_name superpathway of lipopolysaccharide biosynthesis;; lipid A-core biosynthesis (E. coli K-12);;
metacyc_pathway_type Lipid-Biosynthesis; Super-Pathways;; Glycan-Biosynthesis; Lipid-Biosynthesis;;
pfam_acc PF00535; PF13641; PF13704;
pfam_desc Glycosyl transferase family 2; Glycosyltransferase like family 2; Glycosyl transferase family 2;
pfam_id Glycos_transf_2; Glyco_tranf_2_3; Glyco_tranf_2_4;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:7.8e-21 score:73.8 best_domain_score:73.3 name:Glycos_transf_2; db:Pfam-A.hmm|PF13641.6 evalue:1.5e-06 score:27.5 best_domain_score:27.2 name:Glyco_tranf_2_3; db:Pfam-A.hmm|PF13704.6 evalue:9.2e-07 score:28.5 best_domain_score:26.8 name:Glyco_tranf_2_4;
sprot_desc Lipopolysaccharide core biosynthesis glycosyltransferase WaaE;
sprot_id sp|Q9XC90|WAAE_KLEPN;
sprot_target db:uniprot_sprot|sp|Q9XC90|WAAE_KLEPN 3 246 evalue:1.1e-27 qcov:96.10 identity:32.50;
tm_num 1;
3848 4612 transmembrane_helix
ID metaerg.pl|13974
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
topology o4517-4585i;
5585 4617 CDS
ID metaerg.pl|13975
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__UBA1994;s__UBA1994 sp002335865;
genomedb_acc GCA_002335865.1;
genomedb_target db:genomedb|GCA_002335865.1|DDCY01000029.1_258 8 312 evalue:3.0e-73 qcov:94.70 identity:50.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
pfam_acc PF04018;
pfam_desc Domain of unknown function (DUF368);
pfam_id DUF368;
pfam_target db:Pfam-A.hmm|PF04018.13 evalue:8.5e-82 score:273.7 best_domain_score:273.7 name:DUF368;
tm_num 8;
5585 4617 transmembrane_helix
ID metaerg.pl|13976
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
topology o4644-4712i4806-4874o4902-4955i4989-5042o5085-5153i5211-5279o5307-5366i5490-5558o;
6442 6368 tRNA
ID metaerg.pl|13977
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
name tRNA_Ala_tgc;
6555 6481 tRNA
ID metaerg.pl|13978
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
name tRNA_Ile_gat;
6854 6651 bac_16SrRNA
ID metaerg.pl|13979
Name bac_16SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.5391; 8.51104; 33.9059; 64.2315; 11.2755;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|AYNC01034231.157.1418 14 204 evalue:5.39e-91 qcov:94 identity:98.429;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Chitinophagales;Saprospiraceae;uncultured;
>Feature NODE_16738_length_6714_cov_14.3748
1 83 bac_5SrRNA
ID metaerg.pl|13980
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
109 183 tRNA
ID metaerg.pl|13981
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
name tRNA_Asn_gtt;
210 282 tRNA
ID metaerg.pl|13982
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
name tRNA_Thr_ggt;
616 918 CDS
ID metaerg.pl|13983
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106195032.1 1 97 evalue:2.1e-20 qcov:97.00 identity:54.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
tm_num 3;
616 918 transmembrane_helix
ID metaerg.pl|13984
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
topology i640-699o727-795i832-900o;
2809 1034 CDS
ID metaerg.pl|13985
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_D;g__Bacillus_K;s__Bacillus_K trypoxylicola;
genomedb_acc GCF_001590785.1;
genomedb_target db:genomedb|GCF_001590785.1|WP_061947346.1 1 568 evalue:1.9e-134 qcov:96.10 identity:46.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
pfam_acc PF00691;
pfam_desc OmpA family;
pfam_id OmpA;
pfam_target db:Pfam-A.hmm|PF00691.20 evalue:1.5e-14 score:53.4 best_domain_score:52.2 name:OmpA;
sp YES;
1034 1084 lipoprotein_signal_peptide
ID metaerg.pl|13986
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
3035 3700 CDS
ID metaerg.pl|13987
allko_ids K01657; K02619; K03342; K01665; K01664; K01663; K01656; K13497; K13950; K01951; K01658; K13501;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Carnobacterium_A;s__Carnobacterium_A sp000195575;
genomedb_acc GCF_000195575.1;
genomedb_target db:genomedb|GCF_000195575.1|WP_013709695.1 1 219 evalue:4.3e-79 qcov:99.10 identity:64.80;
kegg_pathway_id 00230; 00790; 00400; 02020; 00620; 00983; 00251;
kegg_pathway_name Purine metabolism; Folate biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Two-component system - General; Pyruvate metabolism; Drug metabolism - other enzymes; Glutamate metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
pfam_acc PF00117;
pfam_desc Glutamine amidotransferase class-I;
pfam_id GATase;
pfam_target db:Pfam-A.hmm|PF00117.28 evalue:1.3e-14 score:53.6 best_domain_score:53.2 name:GATase;
4087 4617 CDS
ID metaerg.pl|13988
allgo_ids GO:0003700; GO:0006352; GO:0006355;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106190895.1 1 171 evalue:1.7e-49 qcov:97.20 identity:55.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
pfam_acc PF04542; PF08281;
pfam_desc Sigma-70 region 2 ; Sigma-70, region 4;
pfam_id Sigma70_r2; Sigma70_r4_2;
pfam_target db:Pfam-A.hmm|PF04542.14 evalue:1.1e-10 score:40.4 best_domain_score:39.3 name:Sigma70_r2; db:Pfam-A.hmm|PF08281.12 evalue:3.6e-07 score:29.0 best_domain_score:28.1 name:Sigma70_r4_2;
tigrfam_acc TIGR02937;
tigrfam_desc RNA polymerase sigma factor, sigma-70 family;
tigrfam_name sigma70-ECF;
tigrfam_target db:TIGRFAMs.hmm|TIGR02937 evalue:7.8e-18 score:63.8 best_domain_score:63.6 name:TIGR02937;
4614 5924 CDS
ID metaerg.pl|13989
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
sp YES;
tm_num 1;
4614 4685 signal_peptide
ID metaerg.pl|13990
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
4614 5924 transmembrane_helix
ID metaerg.pl|13991
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
topology o5685-5744i;
6119 6394 CDS
ID metaerg.pl|13992
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Carnobacteriaceae;g__Alkalibacterium;s__Alkalibacterium olivapovliticus;
genomedb_acc GCF_003003275.1;
genomedb_target db:genomedb|GCF_003003275.1|WP_106196348.1 1 91 evalue:1.7e-42 qcov:100.00 identity:92.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
pfam_acc PF00583; PF13673; PF14542;
pfam_desc Acetyltransferase (GNAT) family; Acetyltransferase (GNAT) domain; GCN5-related N-acetyl-transferase;
pfam_id Acetyltransf_1; Acetyltransf_10; Acetyltransf_CG;
pfam_target db:Pfam-A.hmm|PF00583.25 evalue:1.3e-05 score:24.7 best_domain_score:24.5 name:Acetyltransf_1; db:Pfam-A.hmm|PF13673.7 evalue:7.1e-07 score:28.5 best_domain_score:28.2 name:Acetyltransf_10; db:Pfam-A.hmm|PF14542.6 evalue:7.3e-23 score:79.7 best_domain_score:79.5 name:Acetyltransf_CG;
6481 6554 tRNA
ID metaerg.pl|13993
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 21.0899; ; 0.0146252; 21.0753;
name tRNA_Glu_ttc;
>Feature NODE_17223_length_6584_cov_4.82938
236 853 CDS
ID metaerg.pl|13994
allgo_ids GO:0003677; GO:0004803; GO:0006313;
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Puniceicoccaceae;g__BACL24;s__BACL24 sp002729725;
genomedb_acc GCA_002729725.1;
genomedb_target db:genomedb|GCA_002729725.1|MBT61598.1 1 200 evalue:9.9e-86 qcov:97.60 identity:74.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.77603; 0.107243; 0.0623251; 7.9456; ;
pfam_acc PF01797;
pfam_desc Transposase IS200 like;
pfam_id Y1_Tnp;
pfam_target db:Pfam-A.hmm|PF01797.16 evalue:1.1e-13 score:50.6 best_domain_score:48.4 name:Y1_Tnp;
2549 999 CDS
ID metaerg.pl|13995
allec_ids 4.1.99.13;
allgo_ids GO:0051539; GO:0003914; GO:0003677; GO:0071949; GO:0046872; GO:0000719; GO:0018298;
allko_ids K06876;
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Puniceicoccaceae;g__WN38;s__WN38 sp003185655;
genomedb_acc GCF_003185655.1;
genomedb_target db:genomedb|GCF_003185655.1|WP_110130196.1 9 514 evalue:3.0e-208 qcov:98.10 identity:66.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.77603; 0.107243; 0.0623251; 7.9456; ;
pfam_acc PF04244;
pfam_desc Deoxyribodipyrimidine photo-lyase-related protein;
pfam_id DPRP;
pfam_target db:Pfam-A.hmm|PF04244.13 evalue:6.8e-78 score:260.8 best_domain_score:260.3 name:DPRP;
sprot_desc (6-4) photolyase;
sprot_id sp|A9CH39|PHRB_AGRFC;
sprot_target db:uniprot_sprot|sp|A9CH39|PHRB_AGRFC 12 511 evalue:2.8e-136 qcov:96.90 identity:48.40;
3985 2546 CDS
ID metaerg.pl|13996
allec_ids 4.1.99.3;
allgo_ids GO:0003904; GO:0003677; GO:0071949; GO:0000719; GO:0018298;
allko_ids K01669;
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Puniceicoccaceae;g__BACL24;s__BACL24 sp002480015;
genomedb_acc GCA_002480015.1;
genomedb_target db:genomedb|GCA_002480015.1|DLQD01000044.1_6 4 477 evalue:7.5e-185 qcov:99.00 identity:63.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.77603; 0.107243; 0.0623251; 7.9456; ;
pfam_acc PF00875; PF03441;
pfam_desc DNA photolyase; FAD binding domain of DNA photolyase;
pfam_id DNA_photolyase; FAD_binding_7;
pfam_target db:Pfam-A.hmm|PF00875.18 evalue:2.9e-45 score:153.4 best_domain_score:152.5 name:DNA_photolyase; db:Pfam-A.hmm|PF03441.14 evalue:2.7e-90 score:300.5 best_domain_score:299.9 name:FAD_binding_7;
sprot_desc Deoxyribodipyrimidine photo-lyase;
sprot_id sp|A9CJC9|PHRA_AGRFC;
sprot_target db:uniprot_sprot|sp|A9CJC9|PHRA_AGRFC 4 477 evalue:4.5e-136 qcov:99.00 identity:49.50;
4183 5733 CDS
ID metaerg.pl|13997
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Bacillus_AS;s__Bacillus_AS sp003226345;
genomedb_acc GCF_003226345.1;
genomedb_target db:genomedb|GCF_003226345.1|WP_110519341.1 5 514 evalue:2.1e-177 qcov:98.80 identity:63.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.77603; 0.107243; 0.0623251; 7.9456; ;
tm_num 14;
4183 5733 transmembrane_helix
ID metaerg.pl|13998
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.77603; 0.107243; 0.0623251; 7.9456; ;
topology o4240-4299i4318-4377o4405-4464i4573-4641o4654-4713i4771-4839o4849-4905i4924-4992o5020-5088i5212-5271o5281-5349i5410-5478o5566-5634i5671-5727o;
6224 6111 bac_5SrRNA
ID metaerg.pl|13999
Name bac_5SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.77603; 0.107243; 0.0623251; 7.9456; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
6584 6360 bac_23SrRNA
ID metaerg.pl|14000
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.77603; 0.107243; 0.0623251; 7.9456; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FLMP01000812.1368.4251 1 225 evalue:9.85e-82 qcov:100 identity:91.111;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Opitutales;
>Feature NODE_17455_length_6523_cov_19.6105
228 1 CDS
ID metaerg.pl|14001
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Opitutaceae;g__Cephaloticoccus;s__Cephaloticoccus sp002713695;
genomedb_acc GCA_002713695.1;
genomedb_target db:genomedb|GCA_002713695.1|MBE34023.1 4 76 evalue:4.7e-17 qcov:96.10 identity:61.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.442962; 36.2109; 8.70202; 4.54511; 22.5208;
708 2247 bac_16SrRNA
ID metaerg.pl|14002
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.442962; 36.2109; 8.70202; 4.54511; 22.5208;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KF799087.1.1504 6 1511 evalue:0.0 qcov:98 identity:96.220;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Verrucomicrobiales;Rubritaleaceae;
2492 2567 tRNA
ID metaerg.pl|14003
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.442962; 36.2109; 8.70202; 4.54511; 22.5208;
name tRNA_Ala_tgc;
2638 2714 tRNA
ID metaerg.pl|14004
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.442962; 36.2109; 8.70202; 4.54511; 22.5208;
name tRNA_Ile_gat;
3206 6049 bac_23SrRNA
ID metaerg.pl|14005
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.442962; 36.2109; 8.70202; 4.54511; 22.5208;
rRNA_target rRNA_target=db:silva_LSURef.fasta|BATP01000063.398.3217 13 2844 evalue:0.0 qcov:99 identity:90.570;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Verrucomicrobiales;
6365 6478 bac_5SrRNA
ID metaerg.pl|14006
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.442962; 36.2109; 8.70202; 4.54511; 22.5208;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_17645_length_6475_cov_97.7509
1 2442 euk_28SrRNA
ID metaerg.pl|14007
Name euk_28SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.950356; 149.45; 7.36601; 2.37581; 160.142;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JQ689076.1.3262 1 2245 evalue:0.0 qcov:92 identity:86.260;
rRNA_taxon Eukaryota;Opisthokonta;Nucletmycea;
2011 1601 CDS
ID metaerg.pl|14008
genomedb_OC d__Eukaryota;no__Opisthokonta;p__Ascomycota;no__saccharomyceta;no__leotiomyceta;c__Eurotiomycetes;o__Eurotiales;f__Aspergillaceae;g__Aspergillus;s__Aspergillus heteromorphus;;
genomedb_acc GCF_003184545.1;
genomedb_target db:genomedb|GCF_003184545.1|XP_025393832.1 1 134 evalue:5.6e-53 qcov:98.50 identity:75.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.950356; 149.45; 7.36601; 2.37581; 160.142;
5283 6475 euk_18SrRNA
ID metaerg.pl|14009
Name euk_18SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.950356; 149.45; 7.36601; 2.37581; 160.142;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|GU067817.1.1789 3 1193 evalue:0.0 qcov:99 identity:95.142;
rRNA_taxon Eukaryota;Opisthokonta;Aphelidea;Paraphelidium;
5431 5643 CDS
ID metaerg.pl|14010
genomedb_OC d__Eukaryota;no__Opisthokonta;p__Basidiomycota;c__Agaricomycetes;o__Agaricales;f__Agaricaceae;g__Agaricus;s__Agaricus bisporus;;
genomedb_acc GCF_000300555.1;
genomedb_target db:genomedb|GCF_000300555.1|XP_007335664.1 1 70 evalue:1.0e-18 qcov:100.00 identity:71.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.950356; 149.45; 7.36601; 2.37581; 160.142;
>Feature NODE_18115_length_6357_cov_8.05236
911 1 bac_23SrRNA
ID metaerg.pl|14011
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0235218; 12.4629; 0.0236829; 12.5101; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
2109 1261 CDS
ID metaerg.pl|14012
allgo_ids GO:0003824;
allko_ids K02323; K02337;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89603.1 1 257 evalue:3.0e-69 qcov:91.10 identity:52.90;
kegg_pathway_id 03030;
kegg_pathway_name DNA replication;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0235218; 12.4629; 0.0236829; 12.5101; ;
pfam_acc PF02811;
pfam_desc PHP domain;
pfam_id PHP;
pfam_target db:Pfam-A.hmm|PF02811.19 evalue:2.5e-08 score:33.7 best_domain_score:33.4 name:PHP;
2701 2144 CDS
ID metaerg.pl|14013
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0235218; 12.4629; 0.0236829; 12.5101; ;
sp YES;
2144 2191 signal_peptide
ID metaerg.pl|14014
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0235218; 12.4629; 0.0236829; 12.5101; ;
3151 2879 CDS
ID metaerg.pl|14015
allec_ids 3.6.3.14;
allgo_ids GO:0015986; GO:0005886; GO:0045261; GO:0005524; GO:0046933;
allko_ids K02114;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89604.1 10 88 evalue:4.9e-21 qcov:87.80 identity:65.80;
kegg_pathway_id 00195; 00190;
kegg_pathway_name Photosynthesis; Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0235218; 12.4629; 0.0236829; 12.5101; ;
metacyc_pathway_id DENOVOPURINE2-PWY; PRPP-PWY; PWY-6126;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF02823;
pfam_desc ATP synthase, Delta/Epsilon chain, beta-sandwich domain;
pfam_id ATP-synt_DE_N;
pfam_target db:Pfam-A.hmm|PF02823.16 evalue:4.5e-27 score:93.0 best_domain_score:92.9 name:ATP-synt_DE_N;
sprot_desc ATP synthase epsilon chain;
sprot_id sp|Q04S19|ATPE_LEPBJ;
sprot_target db:uniprot_sprot|sp|Q04S19|ATPE_LEPBJ 10 89 evalue:6.2e-15 qcov:88.90 identity:48.80;
tigrfam_acc TIGR01216;
tigrfam_desc ATP synthase F1, epsilon subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATP_synt_epsi;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01216 evalue:1.5e-24 score:85.6 best_domain_score:85.5 name:TIGR01216;
4632 3151 CDS
ID metaerg.pl|14016
allec_ids 7.1.2.2; 3.6.3.14;
allgo_ids GO:0005524; GO:0005886; GO:0045261; GO:0046933; GO:0015986;
allko_ids K02112;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89605.1 16 489 evalue:4.0e-210 qcov:96.10 identity:78.30;
kegg_pathway_id 00195; 00190;
kegg_pathway_name Photosynthesis; Oxidative phosphorylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0235218; 12.4629; 0.0236829; 12.5101; ;
metacyc_pathway_id DENOVOPURINE2-PWY; PRPP-PWY; PWY-6126;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;; superpathway of adenosine nucleotides de novo biosynthesis II;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;;
pfam_acc PF00006; PF02874;
pfam_desc ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta family, beta-barrel domain;
pfam_id ATP-synt_ab; ATP-synt_ab_N;
pfam_target db:Pfam-A.hmm|PF00006.25 evalue:1.3e-61 score:207.2 best_domain_score:206.7 name:ATP-synt_ab; db:Pfam-A.hmm|PF02874.23 evalue:1.2e-21 score:76.2 best_domain_score:74.9 name:ATP-synt_ab_N;
sprot_desc ATP synthase subunit beta;
sprot_id sp|B0THN2|ATPB_HELMI;
sprot_target db:uniprot_sprot|sp|B0THN2|ATPB_HELMI 16 489 evalue:4.8e-194 qcov:96.10 identity:70.60;
tigrfam_acc TIGR01039;
tigrfam_desc ATP synthase F1, beta subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name atpD;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01039 evalue:1.6e-248 score:824.1 best_domain_score:823.9 name:TIGR01039;
5620 4754 CDS
ID metaerg.pl|14017
allec_ids 3.6.3.14;
allgo_ids GO:0015986; GO:0045261; GO:0046933; GO:0005886; GO:0005524; GO:0042777;
allko_ids K02115;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__RSA9;f__RSA9;g__RSA9;s__RSA9 sp003242735;
genomedb_acc GCA_003242735.1;
genomedb_target db:genomedb|GCA_003242735.1|PZN89606.1 1 288 evalue:6.6e-104 qcov:100.00 identity:71.20;
kegg_pathway_id 00190; 00195;
kegg_pathway_name Oxidative phosphorylation; Photosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0235218; 12.4629; 0.0236829; 12.5101; ;
metacyc_pathway_id DENOVOPURINE2-PWY; PWY-6126; PRPP-PWY;
metacyc_pathway_name superpathway of purine nucleotides de novo biosynthesis II;; superpathway of adenosine nucleotides de novo biosynthesis II;; superpathway of histidine, purine, and pyrimidine biosynthesis;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;;
pfam_acc PF00231;
pfam_desc ATP synthase;
pfam_id ATP-synt;
pfam_target db:Pfam-A.hmm|PF00231.19 evalue:5.1e-91 score:304.5 best_domain_score:304.3 name:ATP-synt;
sprot_desc ATP synthase gamma chain;
sprot_id sp|C1A697|ATPG_GEMAT;
sprot_target db:uniprot_sprot|sp|C1A697|ATPG_GEMAT 1 288 evalue:6.3e-85 qcov:100.00 identity:57.40;
tigrfam_acc TIGR01146;
tigrfam_desc ATP synthase F1, gamma subunit;
tigrfam_mainrole Energy metabolism;
tigrfam_name ATPsyn_F1gamma;
tigrfam_sub1role ATP-proton motive force interconversion;
tigrfam_target db:TIGRFAMs.hmm|TIGR01146 evalue:2.3e-93 score:312.2 best_domain_score:312.1 name:TIGR01146;
6357 5710 CDS
ID metaerg.pl|14018
allec_ids 7.1.2.2;
allgo_ids GO:0015986; GO:0005886; GO:0045261; GO:0005524; GO:0046933;
allko_ids K02111;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000008.1_6 1 177 evalue:5.4e-58 qcov:82.30 identity:67.00;
kegg_pathway_id 00190; 00195;
kegg_pathway_name Oxidative phosphorylation; Photosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0235218; 12.4629; 0.0236829; 12.5101; ;
pfam_acc PF00306;
pfam_desc ATP synthase alpha/beta chain, C terminal domain;
pfam_id ATP-synt_ab_C;
pfam_target db:Pfam-A.hmm|PF00306.27 evalue:1.4e-49 score:166.8 best_domain_score:166.4 name:ATP-synt_ab_C;
sprot_desc ATP synthase subunit alpha;
sprot_id sp|A7IH29|ATPA_XANP2;
sprot_target db:uniprot_sprot|sp|A7IH29|ATPA_XANP2 1 167 evalue:9.9e-51 qcov:77.70 identity:62.30;
>Feature NODE_18239_length_6329_cov_11.731
1 351 CDS
ID metaerg.pl|14019
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Trebouxiophyceae;no__Trebouxiophyceae incertae sedis;f__Coccomyxaceae;g__Coccomyxa;s__Coccomyxa subellipsoidea;;
genomedb_acc GCF_000258705.1;
genomedb_target db:genomedb|GCF_000258705.1|XP_005650358.1 20 115 evalue:7.7e-11 qcov:82.80 identity:46.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 13.8744; ; ; 13.8744;
2199 2432 CDS
ID metaerg.pl|14020
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 13.8744; ; ; 13.8744;
2704 2811 arc_5SrRNA
ID metaerg.pl|14021
Name arc_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 13.8744; ; ; 13.8744;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
4126 3398 CDS
ID metaerg.pl|14022
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 13.8744; ; ; 13.8744;
5556 6167 CDS
ID metaerg.pl|14023
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 13.8744; ; ; 13.8744;
>Feature NODE_18381_length_6294_cov_38.4084
801 1244 CDS
ID metaerg.pl|14024
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Gemmobacter;s__Gemmobacter caeni;
genomedb_acc GCF_003054195.1;
genomedb_target db:genomedb|GCF_003054195.1|WP_108130302.1 1 145 evalue:2.6e-32 qcov:98.60 identity:55.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.61084; 50.9749; 0.419922; 0.335938; 52.3416;
sp YES;
801 872 signal_peptide
ID metaerg.pl|14025
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.61084; 50.9749; 0.419922; 0.335938; 52.3416;
1437 1904 CDS
ID metaerg.pl|14026
allgo_ids GO:0005615; GO:0030288;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092892814.1 1 155 evalue:4.6e-43 qcov:100.00 identity:65.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.61084; 50.9749; 0.419922; 0.335938; 52.3416;
pfam_acc PF02469;
pfam_desc Fasciclin domain;
pfam_id Fasciclin;
pfam_target db:Pfam-A.hmm|PF02469.22 evalue:1.3e-36 score:124.9 best_domain_score:124.6 name:Fasciclin;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P74615|Y1483_SYNY3;
sprot_target db:uniprot_sprot|sp|P74615|Y1483_SYNY3 9 155 evalue:1.6e-26 qcov:94.80 identity:50.30;
1437 1505 signal_peptide
ID metaerg.pl|14027
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.61084; 50.9749; 0.419922; 0.335938; 52.3416;
2960 1989 CDS
ID metaerg.pl|14028
allec_ids 3.5.3.17;
allgo_ids GO:0046872; GO:0047972;
allko_ids K01480; K18459;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28171.1 7 323 evalue:1.7e-156 qcov:98.10 identity:84.50;
kegg_pathway_id 00220;
kegg_pathway_name Urea cycle and metabolism of amino groups;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.61084; 50.9749; 0.419922; 0.335938; 52.3416;
pfam_acc PF00491;
pfam_desc Arginase family;
pfam_id Arginase;
pfam_target db:Pfam-A.hmm|PF00491.21 evalue:2.4e-79 score:266.0 best_domain_score:265.8 name:Arginase;
sprot_desc Guanidinopropionase;
sprot_id sp|Q9I6K2|GPUA_PSEAE;
sprot_target db:uniprot_sprot|sp|Q9I6K2|GPUA_PSEAE 8 318 evalue:4.9e-102 qcov:96.30 identity:56.90;
3045 3797 CDS
ID metaerg.pl|14029
allec_ids 1.1.1.107;
allgo_ids GO:0050235; GO:0042820;
allko_ids K07535; K12420; K05711; K18609;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp003076755;
genomedb_acc GCA_003076755.1;
genomedb_target db:genomedb|GCA_003076755.1|PVH28172.1 4 249 evalue:2.6e-112 qcov:98.40 identity:84.60;
kegg_pathway_id 00360; 00632;
kegg_pathway_name Phenylalanine metabolism; Benzoate degradation via CoA ligation;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.61084; 50.9749; 0.419922; 0.335938; 52.3416;
metacyc_pathway_id PWY-5499;
metacyc_pathway_name vitamin B6 degradation;;
metacyc_pathway_type COFACTOR-DEGRADATION;;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:5.6e-56 score:188.3 best_domain_score:188.1 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:3.6e-71 score:238.7 best_domain_score:238.5 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:2.8e-12 score:46.1 best_domain_score:45.4 name:KR;
sprot_desc Pyridoxal 4-dehydrogenase;
sprot_id sp|Q988B7|PLDH_RHILO;
sprot_target db:uniprot_sprot|sp|Q988B7|PLDH_RHILO 4 237 evalue:1.1e-32 qcov:93.60 identity:35.40;
4356 4784 CDS
ID metaerg.pl|14030
allgo_ids GO:0016740;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071470576.1 5 142 evalue:5.0e-52 qcov:97.20 identity:73.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.61084; 50.9749; 0.419922; 0.335938; 52.3416;
pfam_acc PF03734;
pfam_desc L,D-transpeptidase catalytic domain;
pfam_id YkuD;
pfam_target db:Pfam-A.hmm|PF03734.14 evalue:9.4e-17 score:61.0 best_domain_score:60.6 name:YkuD;
sp YES;
4356 4424 signal_peptide
ID metaerg.pl|14031
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.61084; 50.9749; 0.419922; 0.335938; 52.3416;
4963 5430 CDS
ID metaerg.pl|14032
allgo_ids GO:0005524; GO:0003677; GO:0008270; GO:0045892;
allko_ids K00527; K07738;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001314715;
genomedb_acc GCA_001314715.1;
genomedb_target db:genomedb|GCA_001314715.1|KPQ08257.1 1 149 evalue:1.6e-75 qcov:96.10 identity:94.00;
kegg_pathway_id 00240; 00230;
kegg_pathway_name Pyrimidine metabolism; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.61084; 50.9749; 0.419922; 0.335938; 52.3416;
pfam_acc PF03477;
pfam_desc ATP cone domain;
pfam_id ATP-cone;
pfam_target db:Pfam-A.hmm|PF03477.16 evalue:9.2e-19 score:67.0 best_domain_score:66.6 name:ATP-cone;
sprot_desc Transcriptional repressor NrdR;
sprot_id sp|A4WQT3|NRDR_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WQT3|NRDR_RHOS5 1 151 evalue:3.2e-75 qcov:97.40 identity:91.40;
tigrfam_acc TIGR00244;
tigrfam_desc transcriptional regulator NrdR;
tigrfam_mainrole Regulatory functions;
tigrfam_name TIGR00244;
tigrfam_sub1role DNA interactions;
tigrfam_target db:TIGRFAMs.hmm|TIGR00244 evalue:1.5e-49 score:167.0 best_domain_score:166.8 name:TIGR00244;
5480 6292 CDS
ID metaerg.pl|14033
allec_ids 3.5.4.26; 1.1.1.193; 3.5.4.26 1.1.1.193;
allgo_ids GO:0002100; GO:0008251; GO:0008703; GO:0008835; GO:0050661; GO:0008270; GO:0009231;
allko_ids K11752;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter;s__Pararhodobacter sp001691415;
genomedb_acc GCF_001691415.1;
genomedb_target db:genomedb|GCF_001691415.1|WP_068297595.1 1 270 evalue:4.6e-107 qcov:99.60 identity:73.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.61084; 50.9749; 0.419922; 0.335938; 52.3416;
metacyc_pathway_id RIBOSYN2-PWY;
metacyc_pathway_name flavin biosynthesis I (bacteria and plants);;
metacyc_pathway_type Flavin-Biosynthesis;;
pfam_acc PF00383; PF14437; PF01872;
pfam_desc Cytidine and deoxycytidylate deaminase zinc-binding region; MafB19-like deaminase; RibD C-terminal domain;
pfam_id dCMP_cyt_deam_1; MafB19-deam; RibD_C;
pfam_target db:Pfam-A.hmm|PF00383.23 evalue:3.1e-14 score:51.9 best_domain_score:51.0 name:dCMP_cyt_deam_1; db:Pfam-A.hmm|PF14437.6 evalue:4e-07 score:29.1 best_domain_score:28.5 name:MafB19-deam; db:Pfam-A.hmm|PF01872.17 evalue:7.9e-25 score:87.1 best_domain_score:86.6 name:RibD_C;
sprot_desc Riboflavin biosynthesis protein RibD;
sprot_id sp|P44326|RIBD_HAEIN;
sprot_target db:uniprot_sprot|sp|P44326|RIBD_HAEIN 1 245 evalue:8.1e-58 qcov:90.40 identity:49.40;
tigrfam_acc TIGR00326;
tigrfam_desc riboflavin biosynthesis protein RibD;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name eubact_ribD;
tigrfam_sub1role Riboflavin, FMN, and FAD;
tigrfam_target db:TIGRFAMs.hmm|TIGR00326 evalue:1.3e-88 score:296.7 best_domain_score:296.5 name:TIGR00326;
>Feature NODE_18565_length_6254_cov_8.26004
430 215 CDS
ID metaerg.pl|14034
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.4597; ; ; 14.4597; ;
1517 921 CDS
ID metaerg.pl|14035
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.4597; ; ; 14.4597; ;
3219 2566 CDS
ID metaerg.pl|14036
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.4597; ; ; 14.4597; ;
4810 4574 CDS
ID metaerg.pl|14037
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.4597; ; ; 14.4597; ;
5503 4988 CDS
ID metaerg.pl|14038
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.4597; ; ; 14.4597; ;
5956 5756 CDS
ID metaerg.pl|14039
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.4597; ; ; 14.4597; ;
>Feature NODE_18960_length_6170_cov_11.8738
591 400 CDS
ID metaerg.pl|14040
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 20.5645; ; ; 20.5646; ;
1518 910 CDS
ID metaerg.pl|14041
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 20.5645; ; ; 20.5646; ;
2349 1627 CDS
ID metaerg.pl|14042
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 20.5645; ; ; 20.5646; ;
3462 2374 CDS
ID metaerg.pl|14043
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 20.5645; ; ; 20.5646; ;
tm_num 3;
3462 2374 transmembrane_helix
ID metaerg.pl|14044
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 20.5645; ; ; 20.5646; ;
topology o2971-3039i3076-3144o3172-3240i;
5884 5636 CDS
ID metaerg.pl|14045
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 20.5645; ; ; 20.5646; ;
>Feature NODE_20433_length_5879_cov_6.63187
2 940 CDS
ID metaerg.pl|14046
allec_ids 1.6.99.3;
allgo_ids GO:0016491; GO:0055114; GO:0030964; GO:0005886; GO:0050660; GO:0008137; GO:0019646; GO:0009060; GO:0009061; GO:0055070;
allko_ids K03885; K00356; K00382; K01008;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197228.1 1 304 evalue:1.3e-140 qcov:97.40 identity:80.50;
kegg_pathway_id 00190; 00620; 00252; 00450; 00020; 00260; 00010; 00280;
kegg_pathway_name Oxidative phosphorylation; Pyruvate metabolism; Alanine and aspartate metabolism; Selenoamino acid metabolism; Citrate cycle (TCA cycle); Glycine, serine and threonine metabolism; Glycolysis / Gluconeogenesis; Valine, leucine and isoleucine degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 9.87694; ; 9.87694;
pfam_acc PF00070; PF07992;
pfam_desc Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase;
pfam_id Pyr_redox; Pyr_redox_2;
pfam_target db:Pfam-A.hmm|PF00070.27 evalue:1.9e-06 score:27.6 best_domain_score:26.1 name:Pyr_redox; db:Pfam-A.hmm|PF07992.14 evalue:1.5e-22 score:79.4 best_domain_score:79.2 name:Pyr_redox_2;
sprot_desc NADH dehydrogenase;
sprot_id sp|P00393|DHNA_ECOLI;
sprot_target db:uniprot_sprot|sp|P00393|DHNA_ECOLI 14 258 evalue:2.9e-11 qcov:78.50 identity:24.30;
tigrfam_acc TIGR03169;
tigrfam_desc pyridine nucleotide-disulfide oxidoreductase family protein;
tigrfam_name Nterm_to_SelD;
tigrfam_target db:TIGRFAMs.hmm|TIGR03169 evalue:2.1e-102 score:342.3 best_domain_score:342.1 name:TIGR03169;
995 1675 CDS
ID metaerg.pl|14047
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093601.1 1 224 evalue:8.0e-105 qcov:99.10 identity:83.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 9.87694; ; 9.87694;
1841 2488 CDS
ID metaerg.pl|14048
allko_ids K15634; K01837; K02226; K01834;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia spumigena;
genomedb_acc GCF_000340565.2;
genomedb_target db:genomedb|GCF_000340565.2|WP_006197229.1 1 215 evalue:5.7e-108 qcov:100.00 identity:91.60;
kegg_pathway_id 00010; 00860;
kegg_pathway_name Glycolysis / Gluconeogenesis; Porphyrin and chlorophyll metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 9.87694; ; 9.87694;
pfam_acc PF00300;
pfam_desc Histidine phosphatase superfamily (branch 1);
pfam_id His_Phos_1;
pfam_target db:Pfam-A.hmm|PF00300.22 evalue:7.6e-34 score:116.3 best_domain_score:116.1 name:His_Phos_1;
2574 3596 CDS
ID metaerg.pl|14049
allec_ids 2.7.1.2;
allgo_ids GO:0004340; GO:0005524; GO:0005536; GO:0006096; GO:0051156; GO:0005737;
allko_ids K00845;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089093603.1 1 340 evalue:5.1e-172 qcov:100.00 identity:91.50;
kegg_pathway_id 00010; 00500; 00521; 00052;
kegg_pathway_name Glycolysis / Gluconeogenesis; Starch and sucrose metabolism; Streptomycin biosynthesis; Galactose metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 9.87694; ; 9.87694;
metacyc_pathway_id P122-PWY; PWY-5661; GLYCOCAT-PWY; ANAEROFRUCAT-PWY; PWY0-1182; PWY-2722; P124-PWY; TREDEGLOW-PWY; ANAGLYCOLYSIS-PWY;
metacyc_pathway_name heterolactic fermentation;; GDP-glucose biosynthesis;; glycogen degradation I;; homolactic fermentation;; trehalose degradation II (cytosolic);; trehalose degradation IV;; Bifidobacterium shunt;; trehalose degradation I (low osmolarity);; glycolysis III (from glucose);;
metacyc_pathway_type Fermentation-to-Lactate; Pyruvate-Ethanol-Fermentation;; GDP-Sugar-Biosynthesis;; Glycan-Degradation; Glycogen-Degradation;; Fermentation-to-Lactate; Super-Pathways;; Trehalose-Degradation;; Trehalose-Degradation;; Acetate-Formation; Fermentation-to-Lactate; Sugars-And-Polysaccharides-Degradation;; Trehalose-Degradation;; GLYCOLYSIS-VARIANTS;;
pfam_acc PF02685;
pfam_desc Glucokinase;
pfam_id Glucokinase;
pfam_target db:Pfam-A.hmm|PF02685.16 evalue:1.9e-116 score:387.8 best_domain_score:387.6 name:Glucokinase;
sprot_desc Glucokinase;
sprot_id sp|Q3MEM9|GLK_ANAVT;
sprot_target db:uniprot_sprot|sp|Q3MEM9|GLK_ANAVT 1 340 evalue:3.3e-165 qcov:100.00 identity:86.50;
tigrfam_acc TIGR00749;
tigrfam_desc glucokinase;
tigrfam_mainrole Energy metabolism;
tigrfam_name glk;
tigrfam_sub1role Glycolysis/gluconeogenesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00749 evalue:2.8e-110 score:367.7 best_domain_score:367.4 name:TIGR00749;
3629 4243 CDS
ID metaerg.pl|14050
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc sp002949795;
genomedb_acc GCF_002949795.1;
genomedb_target db:genomedb|GCF_002949795.1|WP_104904729.1 5 204 evalue:4.4e-86 qcov:98.00 identity:78.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 9.87694; ; 9.87694;
sp YES;
3629 3712 signal_peptide
ID metaerg.pl|14051
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 9.87694; ; 9.87694;
4788 4420 CDS
ID metaerg.pl|14052
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__NIES-4103;s__NIES-4103 sp002368335;
genomedb_acc GCF_002368335.1;
genomedb_target db:genomedb|GCF_002368335.1|WP_096559374.1 1 122 evalue:2.0e-49 qcov:100.00 identity:82.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 9.87694; ; 9.87694;
pfam_acc PF04972;
pfam_desc BON domain;
pfam_id BON;
pfam_target db:Pfam-A.hmm|PF04972.17 evalue:2.2e-07 score:30.3 best_domain_score:29.9 name:BON;
5069 5587 CDS
ID metaerg.pl|14053
allec_ids 2.2.1.6;
allgo_ids GO:0005948; GO:0005829; GO:0003984; GO:1990610; GO:0009097; GO:0009099;
allko_ids K01653;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__NIES-4103;s__NIES-4103 sp002368335;
genomedb_acc GCF_002368335.1;
genomedb_target db:genomedb|GCF_002368335.1|WP_096560378.1 1 172 evalue:1.7e-83 qcov:100.00 identity:98.30;
kegg_pathway_id 00290; 00770; 00660; 00650;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; Pantothenate and CoA biosynthesis; C5-Branched dibasic acid metabolism; Butanoate metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 9.87694; ; 9.87694;
metacyc_pathway_id VALSYN-PWY; PWY-5101; PWY-3001; THREOCAT-PWY; PWY-5938; PWY-5103; PWY-6396; PWY-6389; PWY-5104; BRANCHED-CHAIN-AA-SYN-PWY; ILEUSYN-PWY; PWY-5939;
metacyc_pathway_name L-valine biosynthesis;; L-isoleucine biosynthesis II;; superpathway of L-isoleucine biosynthesis I;; superpathway of L-threonine metabolism;; pyruvate fermentation to (R)-acetoin I;; L-isoleucine biosynthesis III;; superpathway of 2,3-butanediol biosynthesis;; pyruvate fermentation to (S)-acetoin;; L-isoleucine biosynthesis IV;; superpathway of branched chain amino acid biosynthesis;; L-isoleucine biosynthesis I (from threonine);; pyruvate fermentation to (R)-acetoin II;;
metacyc_pathway_type VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;; ISOLEUCINE-SYN; Super-Pathways;; Super-Pathways; THREONINE-DEG;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; Butanediol-Biosynthesis; Super-Pathways;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;;
pfam_acc PF01842; PF13710; PF10369;
pfam_desc ACT domain; ACT domain; Small subunit of acetolactate synthase;
pfam_id ACT; ACT_5; ALS_ss_C;
pfam_target db:Pfam-A.hmm|PF01842.25 evalue:7.8e-16 score:56.8 best_domain_score:55.4 name:ACT; db:Pfam-A.hmm|PF13710.6 evalue:2.2e-18 score:65.1 best_domain_score:62.7 name:ACT_5; db:Pfam-A.hmm|PF10369.9 evalue:4e-28 score:96.7 best_domain_score:96.7 name:ALS_ss_C;
sprot_desc Acetolactate synthase small subunit;
sprot_id sp|Q55141|ILVH_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55141|ILVH_SYNY3 1 171 evalue:7.4e-73 qcov:99.40 identity:80.70;
tigrfam_acc TIGR00119;
tigrfam_desc acetolactate synthase, small subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name acolac_sm;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00119 evalue:3.4e-66 score:221.2 best_domain_score:221.0 name:TIGR00119;
5875 5788 bac_5SrRNA
ID metaerg.pl|14054
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 9.87694; ; 9.87694;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_20707_length_5828_cov_15.0095
453 1 CDS
ID metaerg.pl|14055
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__RAAP-2;g__Palsa-742;s__Palsa-742 sp003152015;
genomedb_acc GCA_003152015.1;
genomedb_target db:genomedb|GCA_003152015.1|PLZF01000054.1_50 6 149 evalue:1.2e-16 qcov:95.40 identity:45.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.5159; 0.0558295; 0.0563579; 20.628; ;
pfam_acc PF05597;
pfam_desc Poly(hydroxyalcanoate) granule associated protein (phasin);
pfam_id Phasin;
pfam_target db:Pfam-A.hmm|PF05597.11 evalue:5.3e-07 score:28.9 best_domain_score:28.9 name:Phasin;
612 950 CDS
ID metaerg.pl|14056
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667414.1 1 112 evalue:2.4e-33 qcov:100.00 identity:66.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.5159; 0.0558295; 0.0563579; 20.628; ;
1068 1829 CDS
ID metaerg.pl|14057
allgo_ids GO:0004252; GO:0016021;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667413.1 2 248 evalue:1.8e-81 qcov:97.60 identity:63.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.5159; 0.0558295; 0.0563579; 20.628; ;
pfam_acc PF01694;
pfam_desc Rhomboid family;
pfam_id Rhomboid;
pfam_target db:Pfam-A.hmm|PF01694.22 evalue:4.6e-34 score:116.8 best_domain_score:114.8 name:Rhomboid;
sp YES;
tm_num 6;
1068 1130 signal_peptide
ID metaerg.pl|14058
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.5159; 0.0558295; 0.0563579; 20.628; ;
1068 1829 transmembrane_helix
ID metaerg.pl|14059
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.5159; 0.0558295; 0.0563579; 20.628; ;
topology o1275-1343i1380-1436o1446-1514i1527-1583o1593-1661i1698-1766o;
1956 2435 CDS
ID metaerg.pl|14060
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667412.1 2 158 evalue:1.2e-41 qcov:98.70 identity:57.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.5159; 0.0558295; 0.0563579; 20.628; ;
pfam_acc PF05618;
pfam_desc Putative ATP-dependant zinc protease;
pfam_id Zn_protease;
pfam_target db:Pfam-A.hmm|PF05618.11 evalue:3.7e-25 score:87.6 best_domain_score:86.4 name:Zn_protease;
2432 3457 CDS
ID metaerg.pl|14061
allgo_ids GO:0016788;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667411.1 3 337 evalue:5.2e-132 qcov:98.20 identity:73.10;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.5159; 0.0558295; 0.0563579; 20.628; ;
pfam_acc PF04952;
pfam_desc Succinylglutamate desuccinylase / Aspartoacylase family;
pfam_id AstE_AspA;
pfam_target db:Pfam-A.hmm|PF04952.14 evalue:9.1e-55 score:185.0 best_domain_score:184.8 name:AstE_AspA;
3508 4572 CDS
ID metaerg.pl|14062
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441690.1 30 354 evalue:3.0e-114 qcov:91.80 identity:64.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.5159; 0.0558295; 0.0563579; 20.628; ;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:6.6e-22 score:77.7 best_domain_score:76.8 name:Lactamase_B;
5642 4776 CDS
ID metaerg.pl|14063
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667408.1 8 283 evalue:1.3e-54 qcov:95.80 identity:48.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.5159; 0.0558295; 0.0563579; 20.628; ;
5828 5730 bac_5SrRNA
ID metaerg.pl|14064
Name bac_5SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.5159; 0.0558295; 0.0563579; 20.628; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_20864_length_5797_cov_6.7837
419 3 CDS
ID metaerg.pl|14065
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 10.5835; ; 10.5835; ;
1245 481 CDS
ID metaerg.pl|14066
allgo_ids GO:0008703; GO:0009231; GO:0055114;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667415.1 1 248 evalue:9.5e-54 qcov:97.60 identity:54.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 10.5835; ; 10.5835; ;
pfam_acc PF01872;
pfam_desc RibD C-terminal domain;
pfam_id RibD_C;
pfam_target db:Pfam-A.hmm|PF01872.17 evalue:9.8e-38 score:129.2 best_domain_score:129.0 name:RibD_C;
1429 1767 CDS
ID metaerg.pl|14067
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667414.1 1 112 evalue:2.5e-30 qcov:100.00 identity:61.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 10.5835; ; 10.5835; ;
1802 2605 CDS
ID metaerg.pl|14068
allgo_ids GO:0004252; GO:0016021;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667413.1 1 266 evalue:3.5e-75 qcov:99.60 identity:59.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 10.5835; ; 10.5835; ;
pfam_acc PF01694;
pfam_desc Rhomboid family;
pfam_id Rhomboid;
pfam_target db:Pfam-A.hmm|PF01694.22 evalue:1.4e-36 score:125.0 best_domain_score:125.0 name:Rhomboid;
tm_num 6;
1802 2605 transmembrane_helix
ID metaerg.pl|14069
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 10.5835; ; 10.5835; ;
topology i1838-1906o2069-2137i2156-2224o2234-2302i2384-2443o2486-2545i;
2700 3191 CDS
ID metaerg.pl|14070
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667412.1 14 159 evalue:8.3e-35 qcov:89.60 identity:52.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 10.5835; ; 10.5835; ;
pfam_acc PF05618;
pfam_desc Putative ATP-dependant zinc protease;
pfam_id Zn_protease;
pfam_target db:Pfam-A.hmm|PF05618.11 evalue:2.5e-24 score:85.0 best_domain_score:84.6 name:Zn_protease;
3188 4204 CDS
ID metaerg.pl|14071
allgo_ids GO:0016788;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667411.1 3 336 evalue:1.7e-135 qcov:98.80 identity:74.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 10.5835; ; 10.5835; ;
pfam_acc PF04952;
pfam_desc Succinylglutamate desuccinylase / Aspartoacylase family;
pfam_id AstE_AspA;
pfam_target db:Pfam-A.hmm|PF04952.14 evalue:1.1e-56 score:191.3 best_domain_score:190.8 name:AstE_AspA;
4554 4207 CDS
ID metaerg.pl|14072
allgo_ids GO:0003697;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Dermatophilaceae;g__Knoellia;s__Knoellia aerolata;
genomedb_acc GCF_000768695.1;
genomedb_target db:genomedb|GCF_000768695.1|WP_052113241.1 8 113 evalue:2.0e-11 qcov:92.20 identity:46.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 10.5835; ; 10.5835; ;
pfam_acc PF00436;
pfam_desc Single-strand binding protein family;
pfam_id SSB;
pfam_target db:Pfam-A.hmm|PF00436.25 evalue:1.3e-08 score:34.1 best_domain_score:16.3 name:SSB;
5537 4647 CDS
ID metaerg.pl|14073
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667408.1 3 291 evalue:7.9e-60 qcov:97.60 identity:53.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 10.5835; ; 10.5835; ;
5797 5710 bac_5SrRNA
ID metaerg.pl|14074
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 10.5835; ; 10.5835; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_21773_length_5632_cov_10.1761
3 278 CDS
ID metaerg.pl|14075
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 17.5044; ; 17.5044; ; ;
pfam_acc PF00656;
pfam_desc Caspase domain;
pfam_id Peptidase_C14;
pfam_target db:Pfam-A.hmm|PF00656.22 evalue:2.4e-05 score:23.6 best_domain_score:23.5 name:Peptidase_C14;
sp YES;
3 56 signal_peptide
ID metaerg.pl|14076
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 17.5044; ; 17.5044; ; ;
1634 1359 CDS
ID metaerg.pl|14077
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 17.5044; ; 17.5044; ; ;
1930 1718 CDS
ID metaerg.pl|14078
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 17.5044; ; 17.5044; ; ;
2235 1927 CDS
ID metaerg.pl|14079
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 17.5044; ; 17.5044; ; ;
2368 2811 CDS
ID metaerg.pl|14080
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 17.5044; ; 17.5044; ; ;
3480 3704 CDS
ID metaerg.pl|14081
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 17.5044; ; 17.5044; ; ;
4797 5168 CDS
ID metaerg.pl|14082
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 17.5044; ; 17.5044; ; ;
5158 5385 CDS
ID metaerg.pl|14083
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 17.5044; ; 17.5044; ; ;
>Feature NODE_23112_length_5400_cov_9.22413
1965 1 bac_23SrRNA
ID metaerg.pl|14084
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 66.9918; 14.4377; 26.2223; 29.4813; 137.133;
rRNA_target rRNA_target=db:silva_LSURef.fasta|KX158563.31279.34128 1 1578 evalue:0.0 qcov:80 identity:84.654;
rRNA_taxon Bacteria;Bacteroidetes;
3124 2237 CDS
ID metaerg.pl|14085
allgo_ids GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__F082;g__UBA6192;s__UBA6192 sp002842755;
genomedb_acc GCA_002842755.1;
genomedb_target db:genomedb|GCA_002842755.1|PKP50217.1 1 289 evalue:1.4e-101 qcov:98.00 identity:66.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 66.9918; 14.4377; 26.2223; 29.4813; 137.133;
pfam_acc PF10035; PF02588;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2179); Uncharacterised 5xTM membrane BCR, YitT family COG1284;
pfam_id DUF2179; YitT_membrane;
pfam_target db:Pfam-A.hmm|PF10035.9 evalue:7.3e-14 score:50.5 best_domain_score:49.2 name:DUF2179; db:Pfam-A.hmm|PF02588.15 evalue:5.1e-52 score:175.5 best_domain_score:175.2 name:YitT_membrane;
sprot_desc hypothetical protein;
sprot_id sp|P54478|YQFU_BACSU;
sprot_target db:uniprot_sprot|sp|P54478|YQFU_BACSU 18 293 evalue:1.0e-42 qcov:93.60 identity:37.00;
tm_num 5;
3124 2237 transmembrane_helix
ID metaerg.pl|14086
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 66.9918; 14.4377; 26.2223; 29.4813; 137.133;
topology i2261-2329o2372-2440i2474-2542o2570-2638i2708-2776o;
4332 3178 CDS
ID metaerg.pl|14087
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 66.9918; 14.4377; 26.2223; 29.4813; 137.133;
sp YES;
tm_num 1;
3178 3270 signal_peptide
ID metaerg.pl|14088
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 66.9918; 14.4377; 26.2223; 29.4813; 137.133;
4332 3178 transmembrane_helix
ID metaerg.pl|14089
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 66.9918; 14.4377; 26.2223; 29.4813; 137.133;
topology i3211-3270o;
4961 4587 CDS
ID metaerg.pl|14090
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Saprospiraceae;g__OLB9;s__OLB9 sp001567255;
genomedb_acc GCA_001567255.1;
genomedb_target db:genomedb|GCA_001567255.1|KXK36633.1 7 121 evalue:1.5e-28 qcov:92.70 identity:49.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 66.9918; 14.4377; 26.2223; 29.4813; 137.133;
5399 5010 CDS
ID metaerg.pl|14091
allec_ids 2.1.1.-;
allgo_ids GO:0006396; GO:0008173; GO:0051539; GO:0046872; GO:0070041; GO:0070475;
allko_ids K00599; K03215;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__vadinHA17;g__LD21;s__LD21 sp003520925;
genomedb_acc GCA_003520925.1;
genomedb_target db:genomedb|GCA_003520925.1|HBZ20317.1 1 129 evalue:4.5e-36 qcov:100.00 identity:56.60;
kegg_pathway_id 00626; 00450; 00150; 00380; 00340; 00350;
kegg_pathway_name Naphthalene and anthracene degradation; Selenoamino acid metabolism; Androgen and estrogen metabolism; Tryptophan metabolism; Histidine metabolism; Tyrosine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 66.9918; 14.4377; 26.2223; 29.4813; 137.133;
metacyc_pathway_id PWY-5479; PWY-5987; PWY-6292; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6146; PWY-6395; PWY-6427; METHIONINE-DEG1-PWY; PWY-5328; PWY-5773; PWY-6519; CO2FORM-PWY; PWY-5116; PWY-1581; PWY-5856; PWY-6142; PWY-6424; PWY-6154; UBISYN-PWY; METH-ACETATE-PWY; PWY-5857; PWY-6303; PWY-5855; PWY-5209; PWY-6151; PWY-1422; PWY-5305; PWYG-321; PWY-6113; PWY-5729; PWY-5975; PWY-5864; PWY-1061; PWY-5876; PWY-3542; ALL-CHORISMATE-PWY; PWY-6153; PWY-5041; PWY-4021; PWY-6442; PWY-6575; CODH-PWY; PWY-6477; PWY-5467;
metacyc_pathway_name 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);; xanthohumol biosynthesis;; biotin biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; superpathway of seleno-compound metabolism;; rot-2'-enonate biosynthesis;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; ubiquinol-9 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; ; autoinducer AI-2 biosynthesis II (Vibrio);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; methanogenesis from acetate;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; ubiquinol-7 biosynthesis (prokaryotic);; methyl-coenzyme M oxidation to CO2;; S-adenosyl-L-methionine cycle I;; vitamin E biosynthesis (tocopherols);; bixin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; choline biosynthesis II;; superpathway of chorismate metabolism;; autoinducer AI-2 biosynthesis I;; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; spermidine hydroxycinnamic acid conjugates biosynthesis;; juvenile hormone III biosynthesis I;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; gibberellin inactivation II (methylation);; gramine biosynthesis;;
metacyc_pathway_type LIGNAN-SYN;; QUINONE-SYN;; CYSTEINE-SYN; Super-Pathways;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; Biosynthesis; Super-Pathways;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; Rotenoids-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; ; Autoinducer-Biosynthesis;; Super-Pathways; Ubiquinone-Biosynthesis;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; Ubiquinone-Biosynthesis;; METHANOGENESIS;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; Choline-Biosynthesis;; Super-Pathways;; Autoinducer-Biosynthesis;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; N-CONTAINING-SECONDARY-CMPD-SYN;; HORMONE-SYN; JH-III-Biosynthesis;; Autotrophic-CO2-Fixation;; GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;;
pfam_acc PF13847; PF05958;
pfam_desc Methyltransferase domain; tRNA (Uracil-5-)-methyltransferase;
pfam_id Methyltransf_31; tRNA_U5-meth_tr;
pfam_target db:Pfam-A.hmm|PF13847.6 evalue:4.9e-08 score:32.2 best_domain_score:32.1 name:Methyltransf_31; db:Pfam-A.hmm|PF05958.11 evalue:3.8e-20 score:71.4 best_domain_score:68.6 name:tRNA_U5-meth_tr;
sprot_desc Uncharacterized RNA methyltransferase BT_0643;
sprot_id sp|Q8AA22|Y643_BACTN;
sprot_target db:uniprot_sprot|sp|Q8AA22|Y643_BACTN 1 129 evalue:2.5e-33 qcov:100.00 identity:48.10;
>Feature NODE_23925_length_5269_cov_25.0934
962 1912 CDS
ID metaerg.pl|14092
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 178.07; 0.0394608; 178.109; ;
2362 3210 CDS
ID metaerg.pl|14093
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 178.07; 0.0394608; 178.109; ;
tm_num 1;
2362 3210 transmembrane_helix
ID metaerg.pl|14094
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 178.07; 0.0394608; 178.109; ;
topology o2782-2850i;
3580 3398 CDS
ID metaerg.pl|14095
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 178.07; 0.0394608; 178.109; ;
4342 3584 CDS
ID metaerg.pl|14096
allec_ids 3.4.23.-; 2.7.7.49;
allgo_ids GO:0000943; GO:0004190; GO:0004519; GO:0003676; GO:0003964; GO:0008270; GO:0015074;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius sp003072125;
genomedb_acc GCF_003072125.1;
genomedb_target db:genomedb|GCF_003072125.1|WP_133176261.1 1 239 evalue:6.8e-36 qcov:94.80 identity:37.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 178.07; 0.0394608; 178.109; ;
sprot_desc Retrovirus-related Pol polyprotein from transposon TNT 1-94;
sprot_id sp|P10978|POLX_TOBAC;
sprot_target db:uniprot_sprot|sp|P10978|POLX_TOBAC 1 250 evalue:2.1e-36 qcov:99.20 identity:37.30;
5075 4969 arc_5SrRNA
ID metaerg.pl|14097
Name arc_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 178.07; 0.0394608; 178.109; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_24022_length_5251_cov_13.7296
464 3 CDS
ID metaerg.pl|14098
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.229759; 22.566; 0.172319; ; 22.968;
620 955 CDS
ID metaerg.pl|14099
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667414.1 1 111 evalue:2.6e-32 qcov:100.00 identity:67.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.229759; 22.566; 0.172319; ; 22.968;
pfam_acc PF02036;
pfam_desc SCP-2 sterol transfer family;
pfam_id SCP2;
pfam_target db:Pfam-A.hmm|PF02036.17 evalue:4.9e-05 score:23.0 best_domain_score:22.8 name:SCP2;
1075 1878 CDS
ID metaerg.pl|14100
allgo_ids GO:0004252; GO:0016021;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667413.1 1 262 evalue:2.4e-79 qcov:98.10 identity:61.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.229759; 22.566; 0.172319; ; 22.968;
pfam_acc PF01694;
pfam_desc Rhomboid family;
pfam_id Rhomboid;
pfam_target db:Pfam-A.hmm|PF01694.22 evalue:2e-34 score:118.0 best_domain_score:116.4 name:Rhomboid;
sp YES;
tm_num 6;
1075 1185 lipoprotein_signal_peptide
ID metaerg.pl|14101
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.229759; 22.566; 0.172319; ; 22.968;
1075 1878 transmembrane_helix
ID metaerg.pl|14102
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.229759; 22.566; 0.172319; ; 22.968;
topology i1111-1179o1330-1398i1435-1491o1501-1569i1642-1710o1753-1812i;
2026 2502 CDS
ID metaerg.pl|14103
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667412.1 1 152 evalue:1.1e-39 qcov:96.20 identity:55.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.229759; 22.566; 0.172319; ; 22.968;
pfam_acc PF05618;
pfam_desc Putative ATP-dependant zinc protease;
pfam_id Zn_protease;
pfam_target db:Pfam-A.hmm|PF05618.11 evalue:6.9e-24 score:83.5 best_domain_score:82.1 name:Zn_protease;
2502 3518 CDS
ID metaerg.pl|14104
allgo_ids GO:0016788;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667411.1 3 338 evalue:3.0e-140 qcov:99.40 identity:76.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.229759; 22.566; 0.172319; ; 22.968;
pfam_acc PF04952;
pfam_desc Succinylglutamate desuccinylase / Aspartoacylase family;
pfam_id AstE_AspA;
pfam_target db:Pfam-A.hmm|PF04952.14 evalue:3.1e-57 score:193.1 best_domain_score:192.8 name:AstE_AspA;
4016 3564 CDS
ID metaerg.pl|14105
allgo_ids GO:0003697;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Dermatophilaceae;g__Janibacter;s__Janibacter anophelis;
genomedb_acc GCF_001570945.1;
genomedb_target db:genomedb|GCF_001570945.1|WP_068319184.1 36 145 evalue:2.9e-10 qcov:73.30 identity:46.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.229759; 22.566; 0.172319; ; 22.968;
pfam_acc PF00436;
pfam_desc Single-strand binding protein family;
pfam_id SSB;
pfam_target db:Pfam-A.hmm|PF00436.25 evalue:1.7e-10 score:40.1 best_domain_score:21.7 name:SSB;
5015 4140 CDS
ID metaerg.pl|14106
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667408.1 7 286 evalue:4.0e-64 qcov:96.20 identity:54.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.229759; 22.566; 0.172319; ; 22.968;
5250 5173 bac_5SrRNA
ID metaerg.pl|14107
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.229759; 22.566; 0.172319; ; 22.968;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_24884_length_5120_cov_28.7031
96 1565 bac_16SrRNA
ID metaerg.pl|14108
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 49.7642; 5.75473; 10.0769; 29.6913; 4.24125;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|HM127230.1.1398 24 1419 evalue:0.0 qcov:95 identity:97.350;
rRNA_taxon Bacteria;Patescibacteria;Gracilibacteria;JGI 0000069-P22;
1163 1456 CDS
ID metaerg.pl|14109
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__UBA7879;f__UBA7879;g__UBA7879;s__UBA7879 sp002500565;
genomedb_acc GCA_002500565.1;
genomedb_target db:genomedb|GCA_002500565.1|DLRV01000013.1_8 7 77 evalue:1.4e-13 qcov:73.20 identity:60.60;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 49.7642; 5.75473; 10.0769; 29.6913; 4.24125;
1701 4629 bac_23SrRNA
ID metaerg.pl|14110
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 49.7642; 5.75473; 10.0769; 29.6913; 4.24125;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LLEL01000060.382.3294 9 2927 evalue:0.0 qcov:99 identity:85.875;
rRNA_taxon Bacteria;Patescibacteria;Gracilibacteria;
3154 3402 CDS
ID metaerg.pl|14111
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 49.7642; 5.75473; 10.0769; 29.6913; 4.24125;
4069 3386 CDS
ID metaerg.pl|14112
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 49.7642; 5.75473; 10.0769; 29.6913; 4.24125;
4729 4841 bac_5SrRNA
ID metaerg.pl|14113
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 49.7642; 5.75473; 10.0769; 29.6913; 4.24125;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FURJ01000011.95579.98296 20 75 evalue:1.73e-11 qcov:50 identity:89.474;
rRNA_taxon Bacteria;Firmicutes;Clostridia;
4896 4971 tRNA
ID metaerg.pl|14114
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 49.7642; 5.75473; 10.0769; 29.6913; 4.24125;
name tRNA_Arg_tct;
4984 5060 tRNA
ID metaerg.pl|14115
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 49.7642; 5.75473; 10.0769; 29.6913; 4.24125;
name tRNA_Val_tac;
>Feature NODE_25016_length_5102_cov_10.5177
2025 2219 CDS
ID metaerg.pl|14116
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 15.5814; ; ; 15.5814; ;
sp YES;
tm_num 1;
2025 2126 signal_peptide
ID metaerg.pl|14117
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 15.5814; ; ; 15.5814; ;
2025 2219 transmembrane_helix
ID metaerg.pl|14118
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 15.5814; ; ; 15.5814; ;
topology o2052-2120i;
2943 3392 CDS
ID metaerg.pl|14119
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 15.5814; ; ; 15.5814; ;
tm_num 1;
2943 3392 transmembrane_helix
ID metaerg.pl|14120
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 15.5814; ; ; 15.5814; ;
topology i3264-3332o;
3555 3755 CDS
ID metaerg.pl|14121
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 15.5814; ; ; 15.5814; ;
3952 3719 CDS
ID metaerg.pl|14122
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 15.5814; ; ; 15.5814; ;
tm_num 1;
3952 3719 transmembrane_helix
ID metaerg.pl|14123
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 15.5814; ; ; 15.5814; ;
topology o3776-3844i;
4329 4102 CDS
ID metaerg.pl|14124
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 15.5814; ; ; 15.5814; ;
sp YES;
4102 4143 lipoprotein_signal_peptide
ID metaerg.pl|14125
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 15.5814; ; ; 15.5814; ;
4359 5102 CDS
ID metaerg.pl|14126
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 15.5814; ; ; 15.5814; ;
pfam_acc PF08323;
pfam_desc Starch synthase catalytic domain;
pfam_id Glyco_transf_5;
pfam_target db:Pfam-A.hmm|PF08323.11 evalue:2.8e-37 score:128.0 best_domain_score:127.6 name:Glyco_transf_5;
>Feature NODE_25126_length_5089_cov_8.39909
454 218 CDS
ID metaerg.pl|14127
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 14.5305; ; 14.5305; ;
2744 684 CDS
ID metaerg.pl|14128
allgo_ids GO:0005515;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 14.5305; ; 14.5305; ;
pfam_acc PF00397;
pfam_desc WW domain;
pfam_id WW;
pfam_target db:Pfam-A.hmm|PF00397.26 evalue:2.4e-19 score:68.3 best_domain_score:40.6 name:WW;
3421 2924 CDS
ID metaerg.pl|14129
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 14.5305; ; 14.5305; ;
4547 4792 CDS
ID metaerg.pl|14130
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 14.5305; ; 14.5305; ;
>Feature NODE_26316_length_4919_cov_9.44655
285 3557 CDS
ID metaerg.pl|14131
allgo_ids GO:0004252; GO:0006508;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__UBA1383;s__UBA1383 sp002305415;
genomedb_acc GCA_002305415.1;
genomedb_target db:genomedb|GCA_002305415.1|DBQX01000075.1_1 47 1081 evalue:1.2e-153 qcov:95.00 identity:38.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.508492; 12.497; 0.254561; 0.12728; 11.6066;
pfam_acc PF00082;
pfam_desc Subtilase family;
pfam_id Peptidase_S8;
pfam_target db:Pfam-A.hmm|PF00082.22 evalue:2.9e-30 score:104.8 best_domain_score:103.8 name:Peptidase_S8;
sp YES;
285 353 signal_peptide
ID metaerg.pl|14132
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.508492; 12.497; 0.254561; 0.12728; 11.6066;
4365 3688 CDS
ID metaerg.pl|14133
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667408.1 2 225 evalue:1.3e-49 qcov:99.60 identity:51.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.508492; 12.497; 0.254561; 0.12728; 11.6066;
pfam_acc PF13432; PF14559;
pfam_desc Tetratricopeptide repeat; Tetratricopeptide repeat;
pfam_id TPR_16; TPR_19;
pfam_target db:Pfam-A.hmm|PF13432.6 evalue:4.5e-09 score:36.1 best_domain_score:29.7 name:TPR_16; db:Pfam-A.hmm|PF14559.6 evalue:9.2e-06 score:25.3 best_domain_score:21.0 name:TPR_19;
4913 4805 bac_5SrRNA
ID metaerg.pl|14134
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.508492; 12.497; 0.254561; 0.12728; 11.6066;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_27558_length_4755_cov_4.77702
889 212 CDS
ID metaerg.pl|14135
allgo_ids GO:0003676; GO:0008270;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 8.82172; ; 8.82172; ;
pfam_acc PF03732; PF00098;
pfam_desc Retrotransposon gag protein ; Zinc knuckle;
pfam_id Retrotrans_gag; zf-CCHC;
pfam_target db:Pfam-A.hmm|PF03732.17 evalue:2.1e-05 score:23.9 best_domain_score:22.8 name:Retrotrans_gag; db:Pfam-A.hmm|PF00098.23 evalue:0.0001 score:21.5 best_domain_score:21.5 name:zf-CCHC;
1108 893 CDS
ID metaerg.pl|14136
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 8.82172; ; 8.82172; ;
1325 1125 CDS
ID metaerg.pl|14137
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 8.82172; ; 8.82172; ;
1383 1751 CDS
ID metaerg.pl|14138
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 8.82172; ; 8.82172; ;
2414 2049 CDS
ID metaerg.pl|14139
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 8.82172; ; 8.82172; ;
3118 2858 CDS
ID metaerg.pl|14140
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 8.82172; ; 8.82172; ;
3348 3788 CDS
ID metaerg.pl|14141
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 8.82172; ; 8.82172; ;
>Feature NODE_27941_length_4710_cov_17.9096
1 453 CDS
ID metaerg.pl|14142
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 14.7963; ; 14.7963; ;
680 282 CDS
ID metaerg.pl|14143
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 14.7963; ; 14.7963; ;
1385 975 CDS
ID metaerg.pl|14144
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 14.7963; ; 14.7963; ;
>Feature NODE_28345_length_4659_cov_17.6347
1753 1106 CDS
ID metaerg.pl|14145
allec_ids 3.2.2.-;
allgo_ids GO:0003677; GO:0003905; GO:0006284;
allko_ids K03652;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669755.1 13 211 evalue:1.8e-58 qcov:92.60 identity:61.30;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.197827; 22.1204; 0.337769; 23.6882; 1.03216;
metacyc_pathway_id PWY-5381; PWY-2681;
metacyc_pathway_name pyridine nucleotide cycling (plants);; trans-zeatin biosynthesis;;
metacyc_pathway_type NAD-Metabolism;; CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF02245;
pfam_desc Methylpurine-DNA glycosylase (MPG);
pfam_id Pur_DNA_glyco;
pfam_target db:Pfam-A.hmm|PF02245.16 evalue:3.3e-53 score:178.9 best_domain_score:178.8 name:Pur_DNA_glyco;
sprot_desc Putative 3-methyladenine DNA glycosylase;
sprot_id sp|Q0SI65|3MGH_RHOJR;
sprot_target db:uniprot_sprot|sp|Q0SI65|3MGH_RHOJR 8 210 evalue:1.9e-30 qcov:94.40 identity:43.20;
tigrfam_acc TIGR00567;
tigrfam_desc DNA-3-methyladenine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name 3mg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00567 evalue:1.4e-45 score:154.3 best_domain_score:154.2 name:TIGR00567;
3567 1762 CDS
ID metaerg.pl|14146
allec_ids 2.7.7.7; 3.1.11.1;
allgo_ids GO:0003677; GO:0003887; GO:0008852; GO:0046872; GO:0006281; GO:0006260;
allko_ids K04486; K02347;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667402.1 1 601 evalue:2.1e-237 qcov:100.00 identity:70.50;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.197827; 22.1204; 0.337769; 23.6882; 1.03216;
pfam_acc PF14791; PF00633; PF12836; PF14520; PF14716; PF02811;
pfam_desc DNA polymerase beta thumb ; Helix-hairpin-helix motif; Helix-hairpin-helix motif; Helix-hairpin-helix domain; Helix-hairpin-helix domain; PHP domain;
pfam_id DNA_pol_B_thumb; HHH; HHH_3; HHH_5; HHH_8; PHP;
pfam_target db:Pfam-A.hmm|PF14791.6 evalue:5.2e-18 score:64.2 best_domain_score:63.3 name:DNA_pol_B_thumb; db:Pfam-A.hmm|PF00633.23 evalue:1.7e-10 score:39.4 best_domain_score:14.9 name:HHH; db:Pfam-A.hmm|PF12836.7 evalue:8.8e-09 score:34.7 best_domain_score:24.4 name:HHH_3; db:Pfam-A.hmm|PF14520.6 evalue:3.9e-13 score:49.0 best_domain_score:37.1 name:HHH_5; db:Pfam-A.hmm|PF14716.6 evalue:4.2e-21 score:74.3 best_domain_score:61.6 name:HHH_8; db:Pfam-A.hmm|PF02811.19 evalue:2.9e-07 score:30.1 best_domain_score:28.4 name:PHP;
sprot_desc DNA polymerase/3'-5' exonuclease PolX;
sprot_id sp|P94544|POLX_BACSU;
sprot_target db:uniprot_sprot|sp|P94544|POLX_BACSU 7 592 evalue:2.0e-88 qcov:97.50 identity:35.90;
4659 3589 CDS
ID metaerg.pl|14147
allec_ids 4.3.2.1;
allgo_ids GO:0005737; GO:0004056; GO:0042450;
allko_ids K01755; K01756; K01857; K01679; K01744;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667400.1 1 351 evalue:3.3e-169 qcov:98.60 identity:88.60;
kegg_pathway_id 00720; 00020; 00230; 00330; 00252; 00220; 00910; 00362;
kegg_pathway_name Reductive carboxylate cycle (CO2 fixation); Citrate cycle (TCA cycle); Purine metabolism; Arginine and proline metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups; Nitrogen metabolism; Benzoate degradation via hydroxylation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.197827; 22.1204; 0.337769; 23.6882; 1.03216;
metacyc_pathway_id PWY-4984; PWY-5004; PWY-5; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; ARGININE-SYN4-PWY; PWY-4983; PWY-5154; ARGSYN-PWY;
metacyc_pathway_name urea cycle;; superpathway of L-citrulline metabolism;; canavanine biosynthesis;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; L-ornithine biosynthesis II;; nitric oxide biosynthesis II (mammals);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type NITROGEN-DEG;; Citrulline-Biosynthesis; Super-Pathways;; NON-PROTEIN-AMINO-ACID-SYN;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; L-Ornithine-Biosynthesis;; ARGININE-DEG; ARGININE-SYN; Nitric-Oxide-Biosynthesis;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF14698; PF00206;
pfam_desc Argininosuccinate lyase C-terminal; Lyase;
pfam_id ASL_C2; Lyase_1;
pfam_target db:Pfam-A.hmm|PF14698.6 evalue:1.8e-22 score:79.1 best_domain_score:78.4 name:ASL_C2; db:Pfam-A.hmm|PF00206.20 evalue:6e-52 score:176.2 best_domain_score:175.6 name:Lyase_1;
sprot_desc Argininosuccinate lyase;
sprot_id sp|Q2J867|ARLY_FRACC;
sprot_target db:uniprot_sprot|sp|Q2J867|ARLY_FRACC 1 345 evalue:1.8e-97 qcov:96.90 identity:55.70;
tigrfam_acc TIGR00838;
tigrfam_desc argininosuccinate lyase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name argH;
tigrfam_sub1role Glutamate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00838 evalue:1.7e-133 score:445.1 best_domain_score:444.9 name:TIGR00838;
>Feature NODE_28370_length_4657_cov_7.85007
238 1200 CDS
ID metaerg.pl|14148
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 13.1467; ; ; 13.1467;
pfam_acc PF13593;
pfam_desc SBF-like CPA transporter family (DUF4137);
pfam_id SBF_like;
pfam_target db:Pfam-A.hmm|PF13593.6 evalue:7.5e-17 score:60.8 best_domain_score:50.6 name:SBF_like;
tm_num 1;
238 1200 transmembrane_helix
ID metaerg.pl|14149
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 13.1467; ; ; 13.1467;
topology o637-705i;
2421 2037 euk_28SrRNA
ID metaerg.pl|14150
Name euk_28SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 13.1467; ; ; 13.1467;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
3778 4035 CDS
ID metaerg.pl|14151
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Trebouxiophyceae;no__Trebouxiophyceae incertae sedis;f__Coccomyxaceae;g__Coccomyxa;s__Coccomyxa subellipsoidea;;
genomedb_acc GCF_000258705.1;
genomedb_target db:genomedb|GCF_000258705.1|XP_005650221.1 18 79 evalue:3.4e-08 qcov:72.90 identity:54.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 13.1467; ; ; 13.1467;
tm_num 2;
3778 4035 transmembrane_helix
ID metaerg.pl|14152
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 13.1467; ; ; 13.1467;
topology o3847-3915i3934-4002o;
4244 4657 CDS
ID metaerg.pl|14153
allgo_ids GO:0016020;
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Trebouxiophyceae;no__Trebouxiophyceae incertae sedis;f__Coccomyxaceae;g__Coccomyxa;s__Coccomyxa subellipsoidea;;
genomedb_acc GCF_000258705.1;
genomedb_target db:genomedb|GCF_000258705.1|XP_005645031.1 8 107 evalue:1.1e-08 qcov:72.50 identity:46.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 13.1467; ; ; 13.1467;
pfam_acc PF01758; PF13593;
pfam_desc Sodium Bile acid symporter family; SBF-like CPA transporter family (DUF4137);
pfam_id SBF; SBF_like;
pfam_target db:Pfam-A.hmm|PF01758.16 evalue:2e-06 score:26.8 best_domain_score:26.5 name:SBF; db:Pfam-A.hmm|PF13593.6 evalue:1.5e-17 score:63.2 best_domain_score:62.8 name:SBF_like;
tm_num 2;
4244 4657 transmembrane_helix
ID metaerg.pl|14154
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 13.1467; ; ; 13.1467;
topology i4268-4336o4394-4462i;
>Feature NODE_28678_length_4622_cov_5.88023
1106 870 CDS
ID metaerg.pl|14155
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.0731; ; 10.0731; ; ;
2184 1933 CDS
ID metaerg.pl|14156
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.0731; ; 10.0731; ; ;
2685 3275 CDS
ID metaerg.pl|14157
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.0731; ; 10.0731; ; ;
3627 4079 CDS
ID metaerg.pl|14158
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.0731; ; 10.0731; ; ;
4620 4051 CDS
ID metaerg.pl|14159
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.0731; ; 10.0731; ; ;
>Feature NODE_29622_length_4516_cov_6.93858
3704 2925 CDS
ID metaerg.pl|14160
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 12.0607; ; ; 12.0607; ;
>Feature NODE_30291_length_4443_cov_5.2778
4096 2 CDS
ID metaerg.pl|14161
allgo_ids GO:0004866; GO:0031362; GO:0005615; GO:0010951;
allko_ids K06894;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Psychroflexus;s__Psychroflexus gondwanensis;
genomedb_acc GCF_000355905.1;
genomedb_target db:genomedb|GCF_000355905.1|WP_003442472.1 1 1365 evalue:0.0e+00 qcov:100.00 identity:55.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.94596; 11.3669; 1.70953; ; 7.71139;
pfam_acc PF00207; PF07703; PF13205; PF11974; PF17972; PF17962; PF01835;
pfam_desc Alpha-2-macroglobulin family; Alpha-2-macroglobulin bait region domain; Bacterial Ig-like domain; Bacterial alpha-2-macroglobulin MG3 domain; Bacterial Alpha-2-macroglobulin MG5 domain; Bacterial macroglobulin domain 6; MG2 domain;
pfam_id A2M; A2M_BRD; Big_5; bMG3; bMG5; bMG6; MG2;
pfam_target db:Pfam-A.hmm|PF00207.22 evalue:3.8e-05 score:22.7 best_domain_score:20.4 name:A2M; db:Pfam-A.hmm|PF07703.14 evalue:2.7e-20 score:72.4 best_domain_score:67.3 name:A2M_BRD; db:Pfam-A.hmm|PF13205.6 evalue:1.4e-05 score:25.0 best_domain_score:21.8 name:Big_5; db:Pfam-A.hmm|PF11974.8 evalue:1.5e-19 score:69.2 best_domain_score:63.6 name:bMG3; db:Pfam-A.hmm|PF17972.1 evalue:1e-12 score:47.8 best_domain_score:39.8 name:bMG5; db:Pfam-A.hmm|PF17962.1 evalue:2.3e-21 score:75.3 best_domain_score:75.3 name:bMG6; db:Pfam-A.hmm|PF01835.19 evalue:1.7e-19 score:69.3 best_domain_score:60.6 name:MG2;
sp YES;
sprot_desc Alpha-2-macroglobulin;
sprot_id sp|P76578|A2MG_ECOLI;
sprot_target db:uniprot_sprot|sp|P76578|A2MG_ECOLI 246 1281 evalue:5.0e-47 qcov:75.90 identity:20.30;
2 46 lipoprotein_signal_peptide
ID metaerg.pl|14162
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.94596; 11.3669; 1.70953; ; 7.71139;
4367 4266 bac_5SrRNA
ID metaerg.pl|14163
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.94596; 11.3669; 1.70953; ; 7.71139;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_31975_length_4281_cov_4.98864
3 530 CDS
ID metaerg.pl|14164
allgo_ids GO:0009058; GO:0016779;
allko_ids K02536; K04042; K00677; K00640; K00975; K11528; K00966;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Microgenomatia;o__Daviesbacterales;f__UBA10151;g__HO2-FULL-47-45;s__HO2-FULL-47-45 sp001776775;
genomedb_acc GCA_001776775.1;
genomedb_target db:genomedb|GCA_001776775.1|OGE39779.1 3 174 evalue:2.0e-10 qcov:98.30 identity:31.10;
kegg_pathway_id 00920; 00051; 00530; 00272; 00500; 00540;
kegg_pathway_name Sulfur metabolism; Fructose and mannose metabolism; Aminosugars metabolism; Cysteine metabolism; Starch and sucrose metabolism; Lipopolysaccharide biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0709271; 11.2072; 0.528686; 2.05447; 8.55313;
pfam_acc PF00483;
pfam_desc Nucleotidyl transferase;
pfam_id NTP_transferase;
pfam_target db:Pfam-A.hmm|PF00483.23 evalue:2.8e-10 score:39.4 best_domain_score:39.3 name:NTP_transferase;
756 2250 bac_16SrRNA
ID metaerg.pl|14165
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0709271; 11.2072; 0.528686; 2.05447; 8.55313;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|EU245242.1.1460 4 1458 evalue:0.0 qcov:97 identity:93.146;
rRNA_taxon Bacteria;Patescibacteria;Parcubacteria;GWA2-38-13b;
3522 2674 CDS
ID metaerg.pl|14166
allgo_ids GO:0006508; GO:0008236;
allko_ids K01730; K01303;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__GCA-002733185;s__GCA-002733185 sp002733185;
genomedb_acc GCA_002733185.1;
genomedb_target db:genomedb|GCA_002733185.1|PHS68083.1 37 262 evalue:1.2e-33 qcov:80.10 identity:34.50;
kegg_pathway_id 00040;
kegg_pathway_name Pentose and glucuronate interconversions;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0709271; 11.2072; 0.528686; 2.05447; 8.55313;
pfam_acc PF05448; PF12740; PF12146; PF00326;
pfam_desc Acetyl xylan esterase (AXE1); Chlorophyllase enzyme; Serine aminopeptidase, S33; Prolyl oligopeptidase family;
pfam_id AXE1; Chlorophyllase2; Hydrolase_4; Peptidase_S9;
pfam_target db:Pfam-A.hmm|PF05448.12 evalue:4.3e-05 score:21.6 best_domain_score:14.9 name:AXE1; db:Pfam-A.hmm|PF12740.7 evalue:7.4e-07 score:27.6 best_domain_score:27.1 name:Chlorophyllase2; db:Pfam-A.hmm|PF12146.8 evalue:8.7e-07 score:27.7 best_domain_score:15.9 name:Hydrolase_4; db:Pfam-A.hmm|PF00326.21 evalue:1.2e-19 score:69.8 best_domain_score:69.3 name:Peptidase_S9;
4106 3594 CDS
ID metaerg.pl|14167
allgo_ids GO:0003677; GO:0004803; GO:0006313; GO:0043565; GO:0006310;
allko_ids K07491;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria_A;o__Moranbacterales;f__UBA2206;g__UBA2206;s__UBA2206 sp002772115;
genomedb_acc GCA_002772115.1;
genomedb_target db:genomedb|GCA_002772115.1|PIP27831.1 5 141 evalue:1.8e-16 qcov:80.60 identity:38.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0709271; 11.2072; 0.528686; 2.05447; 8.55313;
pfam_acc PF01797;
pfam_desc Transposase IS200 like;
pfam_id Y1_Tnp;
pfam_target db:Pfam-A.hmm|PF01797.16 evalue:3.8e-07 score:29.5 best_domain_score:27.5 name:Y1_Tnp;
sprot_desc hypothetical protein;
sprot_id sp|P44014|Y554_HAEIN;
sprot_target db:uniprot_sprot|sp|P44014|Y554_HAEIN 5 159 evalue:2.2e-13 qcov:91.20 identity:31.70;
>Feature NODE_34541_length_4056_cov_7.04949
414 521 bac_5SrRNA
ID metaerg.pl|14168
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.36892; 9.42652; 2.43856; 0.157706; 12.3917;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CXYX01000012.1.2987 1 108 evalue:2.07e-25 qcov:100 identity:86.111;
rRNA_taxon Bacteria;Firmicutes;Clostridia;
659 767 bac_5SrRNA
ID metaerg.pl|14169
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.36892; 9.42652; 2.43856; 0.157706; 12.3917;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
2163 988 CDS
ID metaerg.pl|14170
allgo_ids GO:0016787; GO:0005654; GO:0016805; GO:0006508; GO:0032268;
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lutisporales;f__Lutisporaceae;g__BRH-c25;s__BRH-c25 sp001515955;
genomedb_acc GCA_001515955.1;
genomedb_target db:genomedb|GCA_001515955.1|KUO74359.1 7 391 evalue:9.2e-133 qcov:98.50 identity:62.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.36892; 9.42652; 2.43856; 0.157706; 12.3917;
pfam_acc PF07687; PF01546;
pfam_desc Peptidase dimerisation domain; Peptidase family M20/M25/M40;
pfam_id M20_dimer; Peptidase_M20;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:1.8e-08 score:33.5 best_domain_score:32.2 name:M20_dimer; db:Pfam-A.hmm|PF01546.28 evalue:4.1e-06 score:25.9 best_domain_score:25.2 name:Peptidase_M20;
sprot_desc Peptidase M20 domain-containing protein 2;
sprot_id sp|A3KG59|P20D2_MOUSE;
sprot_target db:uniprot_sprot|sp|A3KG59|P20D2_MOUSE 8 387 evalue:8.9e-66 qcov:97.20 identity:37.60;
tigrfam_acc TIGR01891;
tigrfam_desc amidohydrolase;
tigrfam_mainrole Protein fate;
tigrfam_name amidohydrolases;
tigrfam_sub1role Degradation of proteins, peptides, and glycopeptides;
tigrfam_target db:TIGRFAMs.hmm|TIGR01891 evalue:8.4e-63 score:211.8 best_domain_score:210.9 name:TIGR01891;
3621 2242 CDS
ID metaerg.pl|14171
allec_ids 3.5.1.81;
allgo_ids GO:0016787; GO:0005737; GO:0047420;
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Caldisalinibacteraceae;g__Caldisalinibacter;s__Caldisalinibacter kiritimatiensis;
genomedb_acc GCF_000387765.1;
genomedb_target db:genomedb|GCF_000387765.1|WP_006307383.1 1 451 evalue:2.9e-154 qcov:98.30 identity:59.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.36892; 9.42652; 2.43856; 0.157706; 12.3917;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:8.1e-16 score:57.5 best_domain_score:53.2 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:2.6e-31 score:108.9 best_domain_score:57.1 name:Amidohydro_3;
sprot_desc D-aminoacylase;
sprot_id sp|P72349|NDAD_ALCXX;
sprot_target db:uniprot_sprot|sp|P72349|NDAD_ALCXX 2 453 evalue:1.1e-51 qcov:98.50 identity:31.60;
3821 4054 CDS
ID metaerg.pl|14172
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Natronincolaceae;g__Alkaliphilus;s__Alkaliphilus peptidifermentans;
genomedb_acc GCF_900101495.1;
genomedb_target db:genomedb|GCF_900101495.1|WP_091545801.1 6 78 evalue:1.7e-22 qcov:93.60 identity:67.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.36892; 9.42652; 2.43856; 0.157706; 12.3917;
>Feature NODE_35162_length_4001_cov_7.72656
1 231 CDS
ID metaerg.pl|14173
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 12.6409; ; ; 12.6409;
539 122 euk_18SrRNA
ID metaerg.pl|14174
Name euk_18SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 12.6409; ; ; 12.6409;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KY086483.1.1743 1 417 evalue:6.95e-108 qcov:99 identity:84.038;
rRNA_taxon Eukaryota;Archaeplastida;
1262 1753 CDS
ID metaerg.pl|14175
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 12.6409; ; ; 12.6409;
tm_num 1;
1262 1753 transmembrane_helix
ID metaerg.pl|14176
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 12.6409; ; ; 12.6409;
topology i1274-1327o;
2710 2426 CDS
ID metaerg.pl|14177
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 12.6409; ; ; 12.6409;
2880 4001 CDS
ID metaerg.pl|14178
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 12.6409; ; ; 12.6409;
sp YES;
2880 2939 signal_peptide
ID metaerg.pl|14179
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 12.6409; ; ; 12.6409;
>Feature NODE_36440_length_3904_cov_7.32996
994 134 CDS
ID metaerg.pl|14180
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Nitrincola;s__Nitrincola sp000764495;
genomedb_acc GCF_000764495.1;
genomedb_target db:genomedb|GCF_000764495.1|WP_036524807.1 1 286 evalue:6.0e-97 qcov:100.00 identity:67.10;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.53383; 9.88412; 17.2866; 2.61321; 35.3175;
pfam_acc PF08340; PF03755;
pfam_desc Domain of unknown function (DUF1732); YicC-like family, N-terminal region;
pfam_id DUF1732; YicC_N;
pfam_target db:Pfam-A.hmm|PF08340.11 evalue:1.5e-33 score:113.8 best_domain_score:112.3 name:DUF1732; db:Pfam-A.hmm|PF03755.13 evalue:3.6e-41 score:140.3 best_domain_score:139.5 name:YicC_N;
sprot_desc hypothetical protein;
sprot_id sp|P44726|Y467_HAEIN;
sprot_target db:uniprot_sprot|sp|P44726|Y467_HAEIN 1 286 evalue:2.7e-56 qcov:100.00 identity:47.20;
tigrfam_acc TIGR00255;
tigrfam_desc TIGR00255 family protein;
tigrfam_mainrole Hypothetical proteins;
tigrfam_name TIGR00255;
tigrfam_sub1role Conserved;
tigrfam_target db:TIGRFAMs.hmm|TIGR00255 evalue:7.9e-84 score:280.9 best_domain_score:280.7 name:TIGR00255;
1087 1860 CDS
ID metaerg.pl|14181
allec_ids 2.7.7.56;
allgo_ids GO:0000175; GO:0000049; GO:0009022; GO:0016075; GO:0006364; GO:0008033;
allko_ids K00962; K01516; K00989;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Nitrincola;s__Nitrincola lacisaponensis;
genomedb_acc GCF_000691225.1;
genomedb_target db:genomedb|GCF_000691225.1|WP_051632474.1 1 255 evalue:2.5e-134 qcov:99.20 identity:97.60;
kegg_pathway_id 00730; 00230; 00240;
kegg_pathway_name Thiamine metabolism; Purine metabolism; Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.53383; 9.88412; 17.2866; 2.61321; 35.3175;
metacyc_pathway_id PWY0-1479;
metacyc_pathway_name tRNA processing;;
metacyc_pathway_type Nucleic-Acid-Processing;;
pfam_acc PF01138; PF03725;
pfam_desc 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2;
pfam_id RNase_PH; RNase_PH_C;
pfam_target db:Pfam-A.hmm|PF01138.21 evalue:2.3e-27 score:95.3 best_domain_score:93.9 name:RNase_PH; db:Pfam-A.hmm|PF03725.15 evalue:7.3e-13 score:47.6 best_domain_score:46.9 name:RNase_PH_C;
sprot_desc Ribonuclease PH;
sprot_id sp|A4Y0L7|RNPH_PSEMY;
sprot_target db:uniprot_sprot|sp|A4Y0L7|RNPH_PSEMY 18 254 evalue:1.0e-94 qcov:92.20 identity:73.40;
tigrfam_acc TIGR01966;
tigrfam_desc ribonuclease PH;
tigrfam_mainrole Transcription;
tigrfam_name RNasePH;
tigrfam_sub1role RNA processing;
tigrfam_target db:TIGRFAMs.hmm|TIGR01966 evalue:1.4e-114 score:380.3 best_domain_score:380.1 name:TIGR01966;
2721 1948 CDS
ID metaerg.pl|14182
allec_ids 3.1.11.2;
allko_ids K01741; K10772;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Nitrincola;s__Nitrincola lacisaponensis;
genomedb_acc GCF_000691225.1;
genomedb_target db:genomedb|GCF_000691225.1|WP_036543260.1 1 257 evalue:1.4e-142 qcov:100.00 identity:93.80;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.53383; 9.88412; 17.2866; 2.61321; 35.3175;
pfam_acc PF03372;
pfam_desc Endonuclease/Exonuclease/phosphatase family;
pfam_id Exo_endo_phos;
pfam_target db:Pfam-A.hmm|PF03372.23 evalue:3.4e-08 score:32.5 best_domain_score:31.8 name:Exo_endo_phos;
tigrfam_acc TIGR00195; TIGR00633;
tigrfam_desc exodeoxyribonuclease III; exodeoxyribonuclease III (xth);
tigrfam_mainrole DNA metabolism; DNA metabolism;
tigrfam_name exoDNase_III; xth;
tigrfam_sub1role DNA replication, recombination, and repair; DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00195 evalue:1.3e-57 score:194.5 best_domain_score:194.3 name:TIGR00195; db:TIGRFAMs.hmm|TIGR00633 evalue:2e-61 score:206.9 best_domain_score:206.7 name:TIGR00633;
2887 3528 CDS
ID metaerg.pl|14183
allec_ids 2.4.2.10;
allgo_ids GO:0009116; GO:0000287; GO:0004588; GO:0044205;
allko_ids K00762;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Nitrincola;s__Nitrincola lacisaponensis;
genomedb_acc GCF_000691225.1;
genomedb_target db:genomedb|GCF_000691225.1|WP_036543415.1 1 213 evalue:9.6e-100 qcov:100.00 identity:87.80;
kegg_pathway_id 00983; 00240;
kegg_pathway_name Drug metabolism - other enzymes; Pyrimidine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.53383; 9.88412; 17.2866; 2.61321; 35.3175;
metacyc_pathway_id PWY0-162; PRPP-PWY; PWY-5686;
metacyc_pathway_name superpathway of pyrimidine ribonucleotides de novo biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;;
metacyc_pathway_type Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; Super-Pathways;; UMP-Biosynthesis;;
pfam_acc PF00156;
pfam_desc Phosphoribosyl transferase domain;
pfam_id Pribosyltran;
pfam_target db:Pfam-A.hmm|PF00156.27 evalue:2e-12 score:46.1 best_domain_score:45.6 name:Pribosyltran;
sprot_desc Orotate phosphoribosyltransferase;
sprot_id sp|Q02E31|PYRE_PSEAB;
sprot_target db:uniprot_sprot|sp|Q02E31|PYRE_PSEAB 1 213 evalue:1.4e-81 qcov:100.00 identity:70.40;
tigrfam_acc TIGR00336;
tigrfam_desc orotate phosphoribosyltransferase;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name pyrE;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR00336 evalue:2.7e-61 score:205.5 best_domain_score:205.1 name:TIGR00336;
3903 3487 CDS
ID metaerg.pl|14184
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.53383; 9.88412; 17.2866; 2.61321; 35.3175;
3881 3768 bac_5SrRNA
ID metaerg.pl|14185
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.53383; 9.88412; 17.2866; 2.61321; 35.3175;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MUFH01000040.9286.11907 1 109 evalue:1.31e-32 qcov:96 identity:89.908;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;
>Feature NODE_39477_length_3685_cov_9.0427
411 1 CDS
ID metaerg.pl|14186
allgo_ids GO:0003714; GO:0006351;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 16.0221; ; ; 16.0218;
pfam_acc PF12070;
pfam_desc Protein SCAI;
pfam_id SCAI;
pfam_target db:Pfam-A.hmm|PF12070.8 evalue:6.8e-19 score:67.3 best_domain_score:67.0 name:SCAI;
939 604 CDS
ID metaerg.pl|14187
allgo_ids GO:0003714; GO:0006351;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 16.0221; ; ; 16.0218;
pfam_acc PF12070;
pfam_desc Protein SCAI;
pfam_id SCAI;
pfam_target db:Pfam-A.hmm|PF12070.8 evalue:2.4e-08 score:32.5 best_domain_score:32.2 name:SCAI;
sp YES;
604 747 signal_peptide
ID metaerg.pl|14188
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 16.0221; ; ; 16.0218;
1253 1041 CDS
ID metaerg.pl|14189
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 16.0221; ; ; 16.0218;
2491 2697 CDS
ID metaerg.pl|14190
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 16.0221; ; ; 16.0218;
2844 3056 CDS
ID metaerg.pl|14191
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 16.0221; ; ; 16.0218;
>Feature NODE_39828_length_3661_cov_16.1819
2 259 bac_23SrRNA
ID metaerg.pl|14192
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 65.4064; 3.6286; 17.5084; 33.9157; 10.3537;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JRLB01000110.92902.95411 3 258 evalue:1.39e-125 qcov:99 identity:98.438;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Nitrincolaceae;Nitrincola;
429 542 bac_5SrRNA
ID metaerg.pl|14193
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 65.4064; 3.6286; 17.5084; 33.9157; 10.3537;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MUFH01000040.9286.11907 6 114 evalue:1.31e-32 qcov:96 identity:89.908;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;
901 2037 CDS
ID metaerg.pl|14194
allec_ids 6.3.5.5;
allgo_ids GO:0016787; GO:0005524; GO:0004088; GO:0006207; GO:0044205; GO:0006526; GO:0006541;
allko_ids K01955; K13497; K13950; K11541; K01951; K13501; K01658; K00609; K11540; K01657; K03342; K02619; K01664; K01665; K01954; K01956; K01663; K01656;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Nitrincola;s__Nitrincola lacisaponensis;
genomedb_acc GCF_000691225.1;
genomedb_target db:genomedb|GCF_000691225.1|WP_084154540.1 1 378 evalue:8.5e-192 qcov:100.00 identity:86.50;
kegg_pathway_id 00983; 00230; 00400; 00240; 02020; 00251; 00252; 00620; 00790;
kegg_pathway_name Drug metabolism - other enzymes; Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Pyrimidine metabolism; Two-component system - General; Glutamate metabolism; Alanine and aspartate metabolism; Pyruvate metabolism; Folate biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 65.4064; 3.6286; 17.5084; 33.9157; 10.3537;
metacyc_pathway_id PWY0-162; ARGSYNBSUB-PWY; ARG+POLYAMINE-SYN; PWY-5686; PRPP-PWY; PWY-5154; ARGSYN-PWY;
metacyc_pathway_name superpathway of pyrimidine ribonucleotides de novo biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; superpathway of arginine and polyamine biosynthesis;; UMP biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; L-arginine biosynthesis I (via L-ornithine);;
metacyc_pathway_type Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;; ARGININE-SYN;; Polyamine-Biosynthesis; Super-Pathways;; UMP-Biosynthesis;; Super-Pathways;; ARGININE-SYN;; ARGININE-SYN; Super-Pathways;;
pfam_acc PF00988; PF00117; PF07722;
pfam_desc Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; Peptidase C26;
pfam_id CPSase_sm_chain; GATase; Peptidase_C26;
pfam_target db:Pfam-A.hmm|PF00988.22 evalue:1.4e-53 score:179.4 best_domain_score:178.4 name:CPSase_sm_chain; db:Pfam-A.hmm|PF00117.28 evalue:8.7e-47 score:158.6 best_domain_score:158.1 name:GATase; db:Pfam-A.hmm|PF07722.13 evalue:6.7e-06 score:25.2 best_domain_score:22.5 name:Peptidase_C26;
sprot_desc Carbamoyl-phosphate synthase small chain;
sprot_id sp|Q8RSS4|CARA_HALER;
sprot_target db:uniprot_sprot|sp|Q8RSS4|CARA_HALER 1 376 evalue:4.7e-165 qcov:99.50 identity:72.40;
tigrfam_acc TIGR01368;
tigrfam_desc carbamoyl-phosphate synthase, small subunit;
tigrfam_mainrole Purines, pyrimidines, nucleosides, and nucleotides;
tigrfam_name CPSaseIIsmall;
tigrfam_sub1role Pyrimidine ribonucleotide biosynthesis;
tigrfam_target db:TIGRFAMs.hmm|TIGR01368 evalue:1.1e-147 score:490.9 best_domain_score:490.7 name:TIGR01368;
2066 3661 CDS
ID metaerg.pl|14195
allec_ids 6.3.5.5;
allgo_ids GO:0005524; GO:0005737; GO:0004088; GO:0046872; GO:0044205; GO:0006526; GO:0071230; GO:0006536; GO:0006541; GO:0006807;
allko_ids K01954; K00609; K01960; K01958; K11540; K01940; K01956; K11541; K01959; K01955;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__Nitrincola;s__Nitrincola lacisaponensis;
genomedb_acc GCF_000691225.1;
genomedb_target db:genomedb|GCF_000691225.1|WP_036549499.1 1 532 evalue:3.3e-298 qcov:100.00 identity:96.60;
kegg_pathway_id 00020; 00240; 00620; 00330; 00251; 00252; 00220;
kegg_pathway_name Citrate cycle (TCA cycle); Pyrimidine metabolism; Pyruvate metabolism; Arginine and proline metabolism; Glutamate metabolism; Alanine and aspartate metabolism; Urea cycle and metabolism of amino groups;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 65.4064; 3.6286; 17.5084; 33.9157; 10.3537;
metacyc_pathway_id ARGSYN-PWY; PWY-5154; PRPP-PWY; PWY-5686; ARG+POLYAMINE-SYN; ARGSYNBSUB-PWY; PWY0-162;
metacyc_pathway_name L-arginine biosynthesis I (via L-ornithine);; L-arginine biosynthesis III (via N-acetyl-L-citrulline);; superpathway of histidine, purine, and pyrimidine biosynthesis;; UMP biosynthesis I;; superpathway of arginine and polyamine biosynthesis;; L-arginine biosynthesis II (acetyl cycle);; superpathway of pyrimidine ribonucleotides de novo biosynthesis;;
metacyc_pathway_type ARGININE-SYN; Super-Pathways;; ARGININE-SYN;; Super-Pathways;; UMP-Biosynthesis;; Polyamine-Biosynthesis; Super-Pathways;; ARGININE-SYN;; Pyrimid-Ribonucleot-De-Novo-Biosyn; Super-Pathways;;
pfam_acc PF02786; PF02787;
pfam_desc Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain;
pfam_id CPSase_L_D2; CPSase_L_D3;
pfam_target db:Pfam-A.hmm|PF02786.17 evalue:1.4e-74 score:249.4 best_domain_score:248.9 name:CPSase_L_D2; db:Pfam-A.hmm|PF02787.19 evalue:2.4e-28 score:98.2 best_domain_score:97.0 name:CPSase_L_D3;
sp YES;
sprot_desc Carbamoyl-phosphate synthase large chain;
sprot_id sp|P38100|CARB_PSEAE;
sprot_target db:uniprot_sprot|sp|P38100|CARB_PSEAE 1 532 evalue:3.7e-256 qcov:100.00 identity:82.00;
2066 2134 lipoprotein_signal_peptide
ID metaerg.pl|14196
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 65.4064; 3.6286; 17.5084; 33.9157; 10.3537;
>Feature NODE_40224_length_3635_cov_43.6142
523 62 CDS
ID metaerg.pl|14197
allgo_ids GO:0005615; GO:0030288;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseicitreum;s__Roseicitreum antarcticum;
genomedb_acc GCF_900107025.1;
genomedb_target db:genomedb|GCF_900107025.1|WP_092892814.1 1 153 evalue:1.1e-52 qcov:100.00 identity:78.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 41.0583; 5.77217; 6.24935; 22.5825; 6.45423;
pfam_acc PF02469;
pfam_desc Fasciclin domain;
pfam_id Fasciclin;
pfam_target db:Pfam-A.hmm|PF02469.22 evalue:5.8e-39 score:132.5 best_domain_score:132.2 name:Fasciclin;
sp YES;
sprot_desc hypothetical protein;
sprot_id sp|P74615|Y1483_SYNY3;
sprot_target db:uniprot_sprot|sp|P74615|Y1483_SYNY3 10 152 evalue:7.6e-29 qcov:93.50 identity:54.80;
62 124 signal_peptide
ID metaerg.pl|14198
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 41.0583; 5.77217; 6.24935; 22.5825; 6.45423;
808 1737 CDS
ID metaerg.pl|14199
allec_ids 1.8.5.-;
allgo_ids GO:0042128; GO:0042597; GO:0046872; GO:0043546; GO:0016672; GO:0030091;
allko_ids K00387; K07147;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__QEYE01;s__QEYE01 sp003122205;
genomedb_acc GCF_003122205.1;
genomedb_target db:genomedb|GCF_003122205.1|WP_109426086.1 20 309 evalue:2.7e-111 qcov:93.90 identity:65.90;
kegg_pathway_id 00920;
kegg_pathway_name Sulfur metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 41.0583; 5.77217; 6.24935; 22.5825; 6.45423;
metacyc_pathway_id PWY-5294; P222-PWY;
metacyc_pathway_name superpathway of sulfide oxidation (Acidithiobacillus ferrooxidans);; sulfide oxidation I (sulfide-quinone reductase);;
metacyc_pathway_type Sulfide-Oxidation; Super-Pathways;; CHEMOAUTOTROPHIC-ENERGY-METABOLISM; Sulfide-Oxidation;;
pfam_acc PF00174;
pfam_desc Oxidoreductase molybdopterin binding domain;
pfam_id Oxidored_molyb;
pfam_target db:Pfam-A.hmm|PF00174.19 evalue:9.8e-28 score:96.1 best_domain_score:95.6 name:Oxidored_molyb;
sp YES;
sprot_desc Protein-methionine-sulfoxide reductase catalytic subunit MsrP;
sprot_id sp|Q5LNE0|MSRP_RUEPO;
sprot_target db:uniprot_sprot|sp|Q5LNE0|MSRP_RUEPO 13 309 evalue:3.4e-105 qcov:96.10 identity:60.80;
808 933 signal_peptide
ID metaerg.pl|14200
Note TAT;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 41.0583; 5.77217; 6.24935; 22.5825; 6.45423;
1737 2366 CDS
ID metaerg.pl|14201
allgo_ids GO:0005887; GO:0009055; GO:0010181; GO:0020037; GO:0046872; GO:0030091;
allko_ids K00529; K17247;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Mangrovicoccus;s__Mangrovicoccus sp003172915;
genomedb_acc GCF_003172915.1;
genomedb_target db:genomedb|GCF_003172915.1|WP_109812372.1 1 192 evalue:3.4e-57 qcov:91.90 identity:61.50;
kegg_pathway_id 00071; 00360;
kegg_pathway_name Fatty acid metabolism; Phenylalanine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 41.0583; 5.77217; 6.24935; 22.5825; 6.45423;
pfam_acc PF01794;
pfam_desc Ferric reductase like transmembrane component;
pfam_id Ferric_reduct;
pfam_target db:Pfam-A.hmm|PF01794.19 evalue:2e-18 score:65.9 best_domain_score:65.9 name:Ferric_reduct;
sprot_desc Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;
sprot_id sp|B2SD40|MSRQ_BRUA1;
sprot_target db:uniprot_sprot|sp|B2SD40|MSRQ_BRUA1 14 194 evalue:1.3e-42 qcov:86.60 identity:51.40;
tm_num 4;
1737 2366 transmembrane_helix
ID metaerg.pl|14202
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 41.0583; 5.77217; 6.24935; 22.5825; 6.45423;
topology i1770-1838o1974-2033i2070-2138o2262-2330i;
2879 3635 bac_16SrRNA
ID metaerg.pl|14203
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 41.0583; 5.77217; 6.24935; 22.5825; 6.45423;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KM077019.1.1436 4 757 evalue:0.0 qcov:99 identity:97.881;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobaculum;
>Feature NODE_40251_length_3633_cov_62.6951
75 1 tRNA
ID metaerg.pl|14204
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 134.558; 23.4312; 71.1318; 9.57393; 30.4215;
name tRNA_Met_cat;
300 197 bac_5SrRNA
ID metaerg.pl|14205
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 134.558; 23.4312; 71.1318; 9.57393; 30.4215;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
3513 555 bac_23SrRNA
ID metaerg.pl|14206
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 134.558; 23.4312; 71.1318; 9.57393; 30.4215;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CAGS01000539.103.3069 1 2957 evalue:0.0 qcov:99 identity:86.566;
rRNA_taxon Bacteria;Chloroflexi;Chloroflexia;
1304 1053 CDS
ID metaerg.pl|14207
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Prochloraceae;g__Prochloron;s__Prochloron didemni;
genomedb_acc GCA_000252485.1;
genomedb_target db:genomedb|GCA_000252485.1|JH610583.1_8 4 69 evalue:4.2e-11 qcov:79.50 identity:60.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 134.558; 23.4312; 71.1318; 9.57393; 30.4215;
2774 3223 CDS
ID metaerg.pl|14208
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 134.558; 23.4312; 71.1318; 9.57393; 30.4215;
>Feature NODE_41679_length_3541_cov_3.90591
2 226 CDS
ID metaerg.pl|14209
allec_ids 2.7.1.71;
allgo_ids GO:0005737; GO:0005524; GO:0004765; GO:0009073; GO:0009423;
allko_ids K00891;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Natrialbaceae;g__Natrinema;s__Natrinema salifodinae;
genomedb_acc GCF_900110455.1;
genomedb_target db:genomedb|GCF_900110455.1|WP_049990988.1 1 74 evalue:6.2e-30 qcov:100.00 identity:86.50;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 7.06104; 0.0864052; 6.97464; ; ;
metacyc_pathway_id PWY-6165; ARO-PWY; PWY-6163; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY;
metacyc_pathway_name chorismate biosynthesis II (archaea);; chorismate biosynthesis I;; chorismate biosynthesis from 3-dehydroquinate;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;;
metacyc_pathway_type Chorismate-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis; Super-Pathways;; Chorismate-Biosynthesis;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
sprot_desc Shikimate kinase;
sprot_id sp|B0R569|AROK_HALS3;
sprot_target db:uniprot_sprot|sp|B0R569|AROK_HALS3 1 74 evalue:1.0e-18 qcov:100.00 identity:60.80;
223 549 CDS
ID metaerg.pl|14210
allgo_ids GO:0046417;
allko_ids K01713; K01850; K04516; K04518; K14170; K14187; K04093; K04092; K03856; K13853;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Natrialbaceae;g__Natronococcus;s__Natronococcus amylolyticus;
genomedb_acc GCF_000337675.1;
genomedb_target db:genomedb|GCF_000337675.1|WP_005559011.1 1 108 evalue:3.1e-38 qcov:100.00 identity:85.20;
kegg_pathway_id 00400;
kegg_pathway_name Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 7.06104; 0.0864052; 6.97464; ; ;
pfam_acc PF01817;
pfam_desc Chorismate mutase type II;
pfam_id CM_2;
pfam_target db:Pfam-A.hmm|PF01817.21 evalue:5.9e-15 score:54.6 best_domain_score:54.3 name:CM_2;
1664 636 CDS
ID metaerg.pl|14211
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Halococcaceae;g__Halococcus;s__Halococcus salifodinae;
genomedb_acc GCF_000336935.1;
genomedb_target db:genomedb|GCF_000336935.1|WP_005042596.1 1 341 evalue:7.8e-128 qcov:99.70 identity:62.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 7.06104; 0.0864052; 6.97464; ; ;
pfam_acc PF10094;
pfam_desc Uncharacterized protein conserved in bacteria (DUF2332);
pfam_id DUF2332;
pfam_target db:Pfam-A.hmm|PF10094.9 evalue:2.2e-108 score:361.9 best_domain_score:361.7 name:DUF2332;
1883 2455 CDS
ID metaerg.pl|14212
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Natrialbaceae;g__Natronorubrum;s__Natronorubrum daqingensis;
genomedb_acc GCF_001971705.1;
genomedb_target db:genomedb|GCF_001971705.1|WP_076583054.1 1 189 evalue:3.0e-89 qcov:99.50 identity:83.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 7.06104; 0.0864052; 6.97464; ; ;
pfam_acc PF01575; PF13452;
pfam_desc MaoC like domain; N-terminal half of MaoC dehydratase;
pfam_id MaoC_dehydratas; MaoC_dehydrat_N;
pfam_target db:Pfam-A.hmm|PF01575.19 evalue:9.4e-20 score:69.6 best_domain_score:69.2 name:MaoC_dehydratas; db:Pfam-A.hmm|PF13452.6 evalue:6.8e-08 score:31.9 best_domain_score:31.5 name:MaoC_dehydrat_N;
3136 2492 CDS
ID metaerg.pl|14213
allec_ids 4.3.2.10; 2.4.2.-;
allgo_ids GO:0003824; GO:0009236; GO:0005737; GO:0004359; GO:0000107; GO:0016829; GO:0006541; GO:0000105;
allko_ids K02501;
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Natrialbaceae;g__Natrialba;s__Natrialba asiatica;
genomedb_acc GCF_000337555.1;
genomedb_target db:genomedb|GCF_000337555.1|WP_006109458.1 1 213 evalue:6.0e-102 qcov:99.50 identity:84.50;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 7.06104; 0.0864052; 6.97464; ; ;
metacyc_pathway_id HISTSYN-PWY; PWY-5800; PRPP-PWY; PWY-5381;
metacyc_pathway_name L-histidine biosynthesis;; xylan biosynthesis;; superpathway of histidine, purine, and pyrimidine biosynthesis;; pyridine nucleotide cycling (plants);;
metacyc_pathway_type HISTIDINE-SYN;; SECONDARY-CELL-WALL;; Super-Pathways;; NAD-Metabolism;;
pfam_acc PF00117; PF07685; PF07722; PF01174;
pfam_desc Glutamine amidotransferase class-I; CobB/CobQ-like glutamine amidotransferase domain; Peptidase C26; SNO glutamine amidotransferase family;
pfam_id GATase; GATase_3; Peptidase_C26; SNO;
pfam_target db:Pfam-A.hmm|PF00117.28 evalue:3.2e-19 score:68.7 best_domain_score:68.4 name:GATase; db:Pfam-A.hmm|PF07685.14 evalue:1.1e-05 score:24.3 best_domain_score:21.7 name:GATase_3; db:Pfam-A.hmm|PF07722.13 evalue:0.00015 score:20.9 best_domain_score:13.3 name:Peptidase_C26; db:Pfam-A.hmm|PF01174.19 evalue:1.6e-06 score:27.3 best_domain_score:24.4 name:SNO;
sprot_desc Imidazole glycerol phosphate synthase subunit HisH;
sprot_id sp|Q3IUP8|HIS5_NATPD;
sprot_target db:uniprot_sprot|sp|Q3IUP8|HIS5_NATPD 2 202 evalue:3.3e-62 qcov:93.90 identity:59.00;
tigrfam_acc TIGR01855;
tigrfam_desc imidazole glycerol phosphate synthase, glutamine amidotransferase subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name IMP_synth_hisH;
tigrfam_sub1role Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01855 evalue:5.8e-63 score:211.4 best_domain_score:211.3 name:TIGR01855;
3347 3234 arc_5SrRNA
ID metaerg.pl|14214
Name arc_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 7.06104; 0.0864052; 6.97464; ; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_41783_length_3534_cov_6.88502
489 1 CDS
ID metaerg.pl|14215
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 11.2202; ; 11.2202;
1504 569 CDS
ID metaerg.pl|14216
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 11.2202; ; 11.2202;
3532 3248 CDS
ID metaerg.pl|14217
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 11.2202; ; 11.2202;
tm_num 2;
3532 3248 transmembrane_helix
ID metaerg.pl|14218
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 11.2202; ; 11.2202;
topology i3266-3334o3392-3451i;
>Feature NODE_42382_length_3495_cov_29.3927
161 88 tRNA
ID metaerg.pl|14219
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.89417; 39.6789; 9.48759; 0.526457; 52.5871;
name tRNA_Gly_tcc;
287 204 tRNA
ID metaerg.pl|14220
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.89417; 39.6789; 9.48759; 0.526457; 52.5871;
name tRNA_Tyr_gta;
1233 394 CDS
ID metaerg.pl|14221
allec_ids 2.7.1.33;
allgo_ids GO:0004594; GO:0005737; GO:0005524; GO:0046872; GO:0015937;
allko_ids K03525;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_B;s__Halomonas_B sp001971685;
genomedb_acc GCF_001971685.1;
genomedb_target db:genomedb|GCF_001971685.1|WP_076749633.1 1 279 evalue:1.2e-153 qcov:100.00 identity:98.60;
kegg_pathway_id 00770;
kegg_pathway_name Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.89417; 39.6789; 9.48759; 0.526457; 52.5871;
metacyc_pathway_id PANTOSYN-PWY; PWY-4242; COA-PWY; PWY-4221;
metacyc_pathway_name superpathway of coenzyme A biosynthesis I (bacteria);; ; coenzyme A biosynthesis I (prokaryotic);; superpathway of coenzyme A biosynthesis II (plants);;
metacyc_pathway_type CoA-Biosynthesis; Super-Pathways; Vitamin-Biosynthesis;; ; CoA-Biosynthesis;; CoA-Biosynthesis; Super-Pathways;;
pfam_acc PF03309;
pfam_desc Type III pantothenate kinase;
pfam_id Pan_kinase;
pfam_target db:Pfam-A.hmm|PF03309.14 evalue:1e-42 score:145.6 best_domain_score:145.3 name:Pan_kinase;
sprot_desc Type III pantothenate kinase;
sprot_id sp|Q1R0I9|COAX_CHRSD;
sprot_target db:uniprot_sprot|sp|Q1R0I9|COAX_CHRSD 1 279 evalue:4.8e-138 qcov:100.00 identity:86.70;
tigrfam_acc TIGR00671;
tigrfam_desc pantothenate kinase, type III;
tigrfam_mainrole Biosynthesis of cofactors, prosthetic groups, and carriers;
tigrfam_name baf;
tigrfam_sub1role Pantothenate and coenzyme A;
tigrfam_target db:TIGRFAMs.hmm|TIGR00671 evalue:2.5e-22 score:78.9 best_domain_score:78.5 name:TIGR00671;
2210 1230 CDS
ID metaerg.pl|14222
allec_ids 6.3.4.15;
allgo_ids GO:0006464; GO:0017053; GO:0005524; GO:0000984; GO:0009374; GO:0004077; GO:0003677; GO:0042803; GO:0009102; GO:0006768; GO:0009305; GO:0006355;
allko_ids K03524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas_B;s__Halomonas_B pantelleriensis;
genomedb_acc GCF_900102875.1;
genomedb_target db:genomedb|GCF_900102875.1|WP_089659618.1 1 326 evalue:2.5e-155 qcov:100.00 identity:85.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.89417; 39.6789; 9.48759; 0.526457; 52.5871;
metacyc_pathway_id PWY0-1264;
metacyc_pathway_name biotin-carboxyl carrier protein assembly;;
metacyc_pathway_type Lipid-Biosynthesis;;
pfam_acc PF02237; PF03099; PF08279;
pfam_desc Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; HTH domain;
pfam_id BPL_C; BPL_LplA_LipB; HTH_11;
pfam_target db:Pfam-A.hmm|PF02237.17 evalue:1.9e-06 score:26.9 best_domain_score:25.8 name:BPL_C; db:Pfam-A.hmm|PF03099.19 evalue:8.1e-09 score:34.7 best_domain_score:34.0 name:BPL_LplA_LipB; db:Pfam-A.hmm|PF08279.12 evalue:4.7e-14 score:51.3 best_domain_score:50.3 name:HTH_11;
sprot_desc Bifunctional ligase/repressor BirA;
sprot_id sp|P06709|BIRA_ECOLI;
sprot_target db:uniprot_sprot|sp|P06709|BIRA_ECOLI 6 323 evalue:5.2e-51 qcov:97.50 identity:37.30;
tigrfam_acc TIGR00121;
tigrfam_desc biotin--[acetyl-CoA-carboxylase] ligase;
tigrfam_mainrole Protein fate;
tigrfam_name birA_ligase;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00121 evalue:2.1e-52 score:177.2 best_domain_score:176.9 name:TIGR00121;
2529 2416 bac_5SrRNA
ID metaerg.pl|14223
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.89417; 39.6789; 9.48759; 0.526457; 52.5871;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MUFH01000040.9286.11907 1 109 evalue:2.85e-29 qcov:96 identity:88.073;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;
3494 2619 bac_23SrRNA
ID metaerg.pl|14224
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.89417; 39.6789; 9.48759; 0.526457; 52.5871;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP019326.3777448.3780361 1 876 evalue:0.0 qcov:100 identity:98.973;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae;Halomonas;
>Feature NODE_42458_length_3491_cov_15.6278
1964 3 CDS
ID metaerg.pl|14225
allgo_ids GO:0043531;
genomedb_OC d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Deinococcaceae;g__Deinococcus;s__Deinococcus planocerae;
genomedb_acc GCF_002869765.1;
genomedb_target db:genomedb|GCF_002869765.1|WP_102126509.1 9 654 evalue:8.0e-105 qcov:98.80 identity:40.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 15.918; 14.4151; 18.8791; 16.9898; 66.202;
pfam_acc PF03704; PF00931;
pfam_desc Bacterial transcriptional activator domain; NB-ARC domain;
pfam_id BTAD; NB-ARC;
pfam_target db:Pfam-A.hmm|PF03704.17 evalue:1.8e-15 score:56.9 best_domain_score:56.9 name:BTAD; db:Pfam-A.hmm|PF00931.22 evalue:1.5e-09 score:36.7 best_domain_score:25.1 name:NB-ARC;
2588 2034 CDS
ID metaerg.pl|14226
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 15.918; 14.4151; 18.8791; 16.9898; 66.202;
sp YES;
2034 2111 signal_peptide
ID metaerg.pl|14227
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 15.918; 14.4151; 18.8791; 16.9898; 66.202;
3491 2867 bac_16SrRNA
ID metaerg.pl|14228
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 15.918; 14.4151; 18.8791; 16.9898; 66.202;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JN178228.1.1518 17 625 evalue:0.0 qcov:97 identity:97.537;
rRNA_taxon Bacteria;Deinococcus-Thermus;Deinococci;Deinococcales;Trueperaceae;Truepera;
>Feature NODE_42953_length_3462_cov_116.084
2 2809 bac_23SrRNA
ID metaerg.pl|14229
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 93.426; 612.284; 138.252; 280.55; 100.056;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AAVW01000041.38097.42074 1 2808 evalue:0.0 qcov:100 identity:97.085;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Nostocales;Nostocaceae;Nodularia PCC-9350;
2884 2996 bac_5SrRNA
ID metaerg.pl|14230
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 93.426; 612.284; 138.252; 280.55; 100.056;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_43994_length_3401_cov_9.28631
3 767 CDS
ID metaerg.pl|14231
allgo_ids GO:0004252; GO:0016021;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667413.1 3 249 evalue:5.9e-72 qcov:97.20 identity:57.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.34759; 0.258074; ; 9.60566; ;
pfam_acc PF01694;
pfam_desc Rhomboid family;
pfam_id Rhomboid;
pfam_target db:Pfam-A.hmm|PF01694.22 evalue:6.6e-32 score:109.8 best_domain_score:108.2 name:Rhomboid;
sp YES;
tm_num 7;
3 74 lipoprotein_signal_peptide
ID metaerg.pl|14232
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.34759; 0.258074; ; 9.60566; ;
3 767 transmembrane_helix
ID metaerg.pl|14233
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.34759; 0.258074; ; 9.60566; ;
topology i6-74o213-281i318-374o384-452i465-521o531-599i636-695o;
826 1305 CDS
ID metaerg.pl|14234
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667412.1 6 152 evalue:4.4e-41 qcov:92.50 identity:56.50;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.34759; 0.258074; ; 9.60566; ;
pfam_acc PF05618;
pfam_desc Putative ATP-dependant zinc protease;
pfam_id Zn_protease;
pfam_target db:Pfam-A.hmm|PF05618.11 evalue:7.6e-26 score:89.9 best_domain_score:89.1 name:Zn_protease;
1317 2318 CDS
ID metaerg.pl|14235
allgo_ids GO:0016788;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667411.1 1 331 evalue:2.0e-136 qcov:99.40 identity:73.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.34759; 0.258074; ; 9.60566; ;
pfam_acc PF04952;
pfam_desc Succinylglutamate desuccinylase / Aspartoacylase family;
pfam_id AstE_AspA;
pfam_target db:Pfam-A.hmm|PF04952.14 evalue:3.7e-53 score:179.7 best_domain_score:179.5 name:AstE_AspA;
3173 2328 CDS
ID metaerg.pl|14236
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667408.1 3 274 evalue:1.0e-56 qcov:96.80 identity:52.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.34759; 0.258074; ; 9.60566; ;
3400 3298 bac_5SrRNA
ID metaerg.pl|14237
Name bac_5SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.34759; 0.258074; ; 9.60566; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_44494_length_3371_cov_28.7609
1334 600 CDS
ID metaerg.pl|14238
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480031.1 1 244 evalue:1.3e-113 qcov:100.00 identity:83.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.349891; 0.226327; 29.557; 0.0301149; 30.1633;
pfam_acc PF06904;
pfam_desc Extensin-like protein C-terminus;
pfam_id Extensin-like_C;
pfam_target db:Pfam-A.hmm|PF06904.12 evalue:4.9e-50 score:169.2 best_domain_score:168.9 name:Extensin-like_C;
sp YES;
600 653 lipoprotein_signal_peptide
ID metaerg.pl|14239
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.349891; 0.226327; 29.557; 0.0301149; 30.1633;
2260 1331 CDS
ID metaerg.pl|14240
allec_ids 1.3.1.43;
allgo_ids GO:0050661; GO:0047794; GO:0070403; GO:0008977; GO:0004665; GO:0042803; GO:0006571;
allko_ids K00891; K03856; K04092; K04093; K00945; K03785; K14187; K01735; K00014; K14170; K00210; K13830; K00951; K01850; K01713; K00800; K04517; K04518; K00286; K00220;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386069.1 1 309 evalue:1.8e-163 qcov:100.00 identity:94.50;
kegg_pathway_id 00230; 00400; 00401; 00240; 00330;
kegg_pathway_name Purine metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis; Novobiocin biosynthesis; Pyrimidine metabolism; Arginine and proline metabolism;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.349891; 0.226327; 29.557; 0.0301149; 30.1633;
metacyc_pathway_id PWY-6120;
metacyc_pathway_name L-tyrosine biosynthesis III;;
metacyc_pathway_type TYROSINE-SYN;;
pfam_acc PF03807; PF03446; PF02153;
pfam_desc NADP oxidoreductase coenzyme F420-dependent; NAD binding domain of 6-phosphogluconate dehydrogenase; Prephenate dehydrogenase;
pfam_id F420_oxidored; NAD_binding_2; PDH;
pfam_target db:Pfam-A.hmm|PF03807.17 evalue:3.8e-11 score:42.7 best_domain_score:41.8 name:F420_oxidored; db:Pfam-A.hmm|PF03446.15 evalue:1.4e-10 score:40.8 best_domain_score:38.9 name:NAD_binding_2; db:Pfam-A.hmm|PF02153.17 evalue:4.8e-74 score:247.9 best_domain_score:247.6 name:PDH;
sp YES;
sprot_desc Cyclohexadienyl dehydrogenase;
sprot_id sp|Q04983|TYRC_ZYMMO;
sprot_target db:uniprot_sprot|sp|Q04983|TYRC_ZYMMO 4 284 evalue:6.2e-54 qcov:90.90 identity:42.20;
1331 1399 signal_peptide
ID metaerg.pl|14241
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.349891; 0.226327; 29.557; 0.0301149; 30.1633;
3369 2257 CDS
ID metaerg.pl|14242
allec_ids 2.6.1.9;
allgo_ids GO:0009058; GO:0030170; GO:0004400; GO:0000105;
allko_ids K00825; K00817;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468179.1 9 370 evalue:6.1e-195 qcov:97.80 identity:94.50;
kegg_pathway_id 00360; 00340; 00300; 00350; 00401; 00400; 00310;
kegg_pathway_name Phenylalanine metabolism; Histidine metabolism; Lysine biosynthesis; Tyrosine metabolism; Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Lysine degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.349891; 0.226327; 29.557; 0.0301149; 30.1633;
metacyc_pathway_id PRPP-PWY; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; HISTIDINE-SYN;;
pfam_acc PF00155; PF00266;
pfam_desc Aminotransferase class I and II; Aminotransferase class-V;
pfam_id Aminotran_1_2; Aminotran_5;
pfam_target db:Pfam-A.hmm|PF00155.21 evalue:4.8e-55 score:186.4 best_domain_score:186.2 name:Aminotran_1_2; db:Pfam-A.hmm|PF00266.19 evalue:1.3e-07 score:30.1 best_domain_score:29.6 name:Aminotran_5;
sprot_desc Histidinol-phosphate aminotransferase;
sprot_id sp|A4WUN9|HIS8_RHOS5;
sprot_target db:uniprot_sprot|sp|A4WUN9|HIS8_RHOS5 13 365 evalue:8.0e-133 qcov:95.40 identity:64.90;
tigrfam_acc TIGR01141;
tigrfam_desc histidinol-phosphate transaminase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name hisC;
tigrfam_sub1role Histidine family;
tigrfam_target db:TIGRFAMs.hmm|TIGR01141 evalue:4e-91 score:304.6 best_domain_score:304.4 name:TIGR01141;
>Feature NODE_46096_length_3282_cov_9.59932
2274 1 bac_23SrRNA
ID metaerg.pl|14243
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 23.2098; 5.19189; 0.364943; 12.1405; 5.51245;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
508 924 CDS
ID metaerg.pl|14244
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Bin34;g__Bin34;s__Bin34 sp002238555;
genomedb_acc GCA_002238555.1;
genomedb_target db:genomedb|GCA_002238555.1|MPMO01000072.1_14 1 111 evalue:3.5e-34 qcov:80.40 identity:66.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 23.2098; 5.19189; 0.364943; 12.1405; 5.51245;
2900 2402 bac_23SrRNA
ID metaerg.pl|14245
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 23.2098; 5.19189; 0.364943; 12.1405; 5.51245;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_46234_length_3274_cov_29.9254
266 340 tRNA
ID metaerg.pl|14246
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.15301; 38.9251; 5.34763; 15.5096; 14.9149;
name tRNA_Ile_gat;
348 422 tRNA
ID metaerg.pl|14247
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.15301; 38.9251; 5.34763; 15.5096; 14.9149;
name tRNA_Ala_tgc;
1357 476 CDS
ID metaerg.pl|14248
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.15301; 38.9251; 5.34763; 15.5096; 14.9149;
740 3274 bac_23SrRNA
ID metaerg.pl|14249
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.15301; 38.9251; 5.34763; 15.5096; 14.9149;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AACY020552182.926.3782 11 2535 evalue:0.0 qcov:99 identity:84.341;
rRNA_taxon Bacteria;Bacteroidetes;
2864 2631 CDS
ID metaerg.pl|14250
allgo_ids GO:0009507;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__RC9;s__RC9 sp002472565;
genomedb_acc GCA_002472565.1;
genomedb_target db:genomedb|GCA_002472565.1|DKSK01000013.1_12 3 74 evalue:7.4e-26 qcov:93.50 identity:84.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.15301; 38.9251; 5.34763; 15.5096; 14.9149;
sprot_desc hypothetical protein;
sprot_id sp|Q3BAI2|YCX91_PHAAO;
sprot_target db:uniprot_sprot|sp|Q3BAI2|YCX91_PHAAO 15 72 evalue:2.6e-17 qcov:75.30 identity:69.00;
>Feature NODE_46925_length_3236_cov_13.1254
2 685 CDS
ID metaerg.pl|14251
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Halobacillaceae;g__Halobacillus_A;s__Halobacillus_A hunanensis;
genomedb_acc GCF_900166655.1;
genomedb_target db:genomedb|GCF_900166655.1|WP_079529226.1 1 227 evalue:7.3e-90 qcov:100.00 identity:70.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 2.16753; 14.4034; ; 16.571; ;
pfam_acc PF00248;
pfam_desc Aldo/keto reductase family;
pfam_id Aldo_ket_red;
pfam_target db:Pfam-A.hmm|PF00248.21 evalue:1.5e-29 score:102.4 best_domain_score:102.1 name:Aldo_ket_red;
929 854 tRNA
ID metaerg.pl|14252
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 2.16753; 14.4034; ; 16.571; ;
name tRNA_Thr_ggt;
1007 933 tRNA
ID metaerg.pl|14253
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 2.16753; 14.4034; ; 16.571; ;
name tRNA_Asn_gtt;
1621 1508 bac_5SrRNA
ID metaerg.pl|14254
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 2.16753; 14.4034; ; 16.571; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
2510 1779 CDS
ID metaerg.pl|14255
allgo_ids GO:0045881; GO:0016021; GO:0005886; GO:0030435;
allko_ids K06349;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus daliensis;
genomedb_acc GCF_900103955.1;
genomedb_target db:genomedb|GCF_900103955.1|WP_090842495.1 17 240 evalue:2.1e-98 qcov:92.20 identity:84.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 2.16753; 14.4034; ; 16.571; ;
pfam_acc PF14089;
pfam_desc KinB-signalling pathway activation in sporulation;
pfam_id KbaA;
pfam_target db:Pfam-A.hmm|PF14089.6 evalue:3.2e-64 score:215.3 best_domain_score:215.0 name:KbaA;
sprot_desc KinB-signaling pathway activation protein;
sprot_id sp|P16449|KBAA_BACSU;
sprot_target db:uniprot_sprot|sp|P16449|KBAA_BACSU 17 210 evalue:1.8e-32 qcov:79.80 identity:38.90;
tm_num 6;
2510 1779 transmembrane_helix
ID metaerg.pl|14256
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 2.16753; 14.4034; ; 16.571; ;
topology i1848-1916o1959-2027i2088-2144o2157-2225i2244-2312o2325-2393i;
3234 2968 CDS
ID metaerg.pl|14257
allgo_ids GO:0051539; GO:0005524; GO:0016887; GO:0046872; GO:0016226; GO:0045892;
allko_ids K03593;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus saliphilus;
genomedb_acc GCF_003044065.1;
genomedb_target db:genomedb|GCF_003044065.1|WP_107583532.1 1 88 evalue:5.8e-35 qcov:100.00 identity:84.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 2.16753; 14.4034; ; 16.571; ;
pfam_acc PF10609;
pfam_desc NUBPL iron-transfer P-loop NTPase;
pfam_id ParA;
pfam_target db:Pfam-A.hmm|PF10609.9 evalue:1.3e-13 score:50.2 best_domain_score:50.0 name:ParA;
sprot_desc Iron-sulfur cluster carrier protein;
sprot_id sp|P50863|APBC_BACSU;
sprot_target db:uniprot_sprot|sp|P50863|APBC_BACSU 1 85 evalue:2.2e-25 qcov:96.60 identity:62.40;
>Feature NODE_48116_length_3176_cov_29.3653
2563 1 bac_23SrRNA
ID metaerg.pl|14258
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 7.85856; 8.42201; 15.8087; 4.37541; 36.4646;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
1 642 CDS
ID metaerg.pl|14259
genomedb_OC d__Bacteria;p__Bacteroidota;c__Kryptonia;o__Kryptoniales;f__Kryptoniaceae;g__Thermokryptus;s__Thermokryptus mobilis;
genomedb_acc GCA_001442855.1;
genomedb_target db:genomedb|GCA_001442855.1|LDXU01000006.1_47 1 209 evalue:1.4e-71 qcov:98.10 identity:67.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 7.85856; 8.42201; 15.8087; 4.37541; 36.4646;
1227 1502 CDS
ID metaerg.pl|14260
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces;s__Streptomyces sp000158895;
genomedb_acc GCA_000158895.1;
genomedb_target db:genomedb|GCA_000158895.1|EFL15839.1 25 91 evalue:8.8e-10 qcov:73.60 identity:62.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 7.85856; 8.42201; 15.8087; 4.37541; 36.4646;
1947 2546 CDS
ID metaerg.pl|14261
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Kiritimatiellae;o__RFP12;f__UBA1067;g__UBA3624;s__UBA3624 sp002373695;
genomedb_acc GCA_002373695.1;
genomedb_target db:genomedb|GCA_002373695.1|DFLH01000027.1_1 1 198 evalue:3.1e-20 qcov:99.50 identity:41.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 7.85856; 8.42201; 15.8087; 4.37541; 36.4646;
tm_num 1;
1947 2546 transmembrane_helix
ID metaerg.pl|14262
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 7.85856; 8.42201; 15.8087; 4.37541; 36.4646;
topology i2004-2072o;
>Feature NODE_48151_length_3174_cov_57.8166
1194 1 euk_18SrRNA
ID metaerg.pl|14263
Name euk_18SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.311508; 389.16; ; 389.472; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|GDAH01000955.711.2254 1 1188 evalue:0.0 qcov:99 identity:91.250;
rRNA_taxon Eukaryota;Archaeplastida;Chloroplastida;Charophyta;
637 443 CDS
ID metaerg.pl|14264
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.311508; 389.16; ; 389.472; ;
1071 838 CDS
ID metaerg.pl|14265
genomedb_OC d__Eukaryota;no__Opisthokonta;p__Basidiomycota;c__Agaricomycetes;o__Agaricales;f__Agaricaceae;g__Agaricus;s__Agaricus bisporus;;
genomedb_acc GCF_000300555.1;
genomedb_target db:genomedb|GCF_000300555.1|XP_007335664.1 18 77 evalue:6.3e-09 qcov:77.90 identity:57.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.311508; 389.16; ; 389.472; ;
1269 1529 CDS
ID metaerg.pl|14266
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.311508; 389.16; ; 389.472; ;
2345 2575 CDS
ID metaerg.pl|14267
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.311508; 389.16; ; 389.472; ;
tm_num 1;
2345 2575 transmembrane_helix
ID metaerg.pl|14268
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.311508; 389.16; ; 389.472; ;
topology o2357-2416i;
2832 3071 CDS
ID metaerg.pl|14269
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.311508; 389.16; ; 389.472; ;
>Feature NODE_49163_length_3124_cov_7.86641
3 620 CDS
ID metaerg.pl|14270
allgo_ids GO:0005524; GO:0005829; GO:0005778; GO:0016887; GO:0042623; GO:0006635; GO:0007031; GO:0016558;
allko_ids K00733; K07767; K13254; K01509; K13338;
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Trebouxiophyceae;o__Chlorellales;f__Chlorellaceae;g__Auxenochlorella;s__Auxenochlorella protothecoides;;
genomedb_acc GCF_000733215.1;
genomedb_target db:genomedb|GCF_000733215.1|XP_011397027.1 11 195 evalue:4.5e-70 qcov:90.20 identity:75.10;
kegg_pathway_id 01030; 00230;
kegg_pathway_name Glycan structures - biosynthesis 1; Purine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 13.5091; ; ; 13.5091;
pfam_acc PF00004; PF07728;
pfam_desc ATPase family associated with various cellular activities (AAA); AAA domain (dynein-related subfamily);
pfam_id AAA; AAA_5;
pfam_target db:Pfam-A.hmm|PF00004.29 evalue:3.3e-43 score:146.5 best_domain_score:146.2 name:AAA; db:Pfam-A.hmm|PF07728.14 evalue:9.4e-05 score:21.7 best_domain_score:18.0 name:AAA_5;
sprot_desc Peroxisome biogenesis protein 1;
sprot_id sp|Q9FNP1|PEX1_ARATH;
sprot_target db:uniprot_sprot|sp|Q9FNP1|PEX1_ARATH 11 195 evalue:1.6e-66 qcov:90.20 identity:68.10;
782 1108 CDS
ID metaerg.pl|14271
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 13.5091; ; ; 13.5091;
pfam_acc PF17862;
pfam_desc AAA+ lid domain;
pfam_id AAA_lid_3;
pfam_target db:Pfam-A.hmm|PF17862.1 evalue:1.1e-09 score:37.2 best_domain_score:36.6 name:AAA_lid_3;
1192 1386 CDS
ID metaerg.pl|14272
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 13.5091; ; ; 13.5091;
>Feature NODE_49734_length_3098_cov_9.51068
3 701 CDS
ID metaerg.pl|14273
allec_ids 2.3.3.9;
allgo_ids GO:0004474; GO:0006097; GO:0005737; GO:0006099;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia sp001758425;
genomedb_acc GCF_001758425.2;
genomedb_target db:genomedb|GCF_001758425.2|WP_070158956.1 2 231 evalue:1.5e-98 qcov:99.10 identity:79.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.348711; 11.7547; 7.69403; ; 19.7975;
metacyc_pathway_id TCA-GLYOX-BYPASS; GLYCOLYSIS-TCA-GLYOX-BYPASS; GLYOXYLATE-BYPASS; GLYOXDEG-PWY; GLYCOL-GLYOXDEG-PWY; P105-PWY; PWY-561;
metacyc_pathway_name superpathway of glyoxylate bypass and TCA;; superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass;; glyoxylate cycle;; glycolate and glyoxylate degradation II;; superpathway of glycol metabolism and degradation;; TCA cycle IV (2-oxoglutarate decarboxylase);; superpathway of glyoxylate cycle and fatty acid degradation;;
metacyc_pathway_type Super-Pathways; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;; Energy-Metabolism;; Glycolate-Degradation;; Alcohol-Degradation; Super-Pathways;; TCA-VARIANTS;; Energy-Metabolism; Super-Pathways;;
pfam_acc PF01274;
pfam_desc Malate synthase;
pfam_id Malate_synthase;
pfam_target db:Pfam-A.hmm|PF01274.22 evalue:1.6e-66 score:223.9 best_domain_score:223.8 name:Malate_synthase;
sp YES;
sprot_desc Malate synthase;
sprot_id sp|Q9ZH77|MASY_STRC2;
sprot_target db:uniprot_sprot|sp|Q9ZH77|MASY_STRC2 2 231 evalue:1.1e-55 qcov:99.10 identity:51.30;
3 125 signal_peptide
ID metaerg.pl|14274
Note TAT;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.348711; 11.7547; 7.69403; ; 19.7975;
1291 710 CDS
ID metaerg.pl|14275
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Actinomycetales;f__Micrococcaceae;g__Nesterenkonia;s__Nesterenkonia alba;
genomedb_acc GCF_000421745.1;
genomedb_target db:genomedb|GCF_000421745.1|WP_022873593.1 1 193 evalue:1.5e-67 qcov:100.00 identity:70.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.348711; 11.7547; 7.69403; ; 19.7975;
sp YES;
tm_num 1;
710 775 signal_peptide
ID metaerg.pl|14276
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.348711; 11.7547; 7.69403; ; 19.7975;
1291 710 transmembrane_helix
ID metaerg.pl|14277
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.348711; 11.7547; 7.69403; ; 19.7975;
topology i728-796o;
1690 1615 tRNA
ID metaerg.pl|14278
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.348711; 11.7547; 7.69403; ; 19.7975;
name tRNA_Pro_cgg;
1926 1814 bac_5SrRNA
ID metaerg.pl|14279
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.348711; 11.7547; 7.69403; ; 19.7975;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
3098 2217 bac_23SrRNA
ID metaerg.pl|14280
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.348711; 11.7547; 7.69403; ; 19.7975;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CBLL010000172.2006.5098 1 882 evalue:0.0 qcov:100 identity:96.599;
rRNA_taxon Bacteria;Actinobacteria;Actinobacteria;Micrococcales;Micrococcaceae;
>Feature NODE_51370_length_3025_cov_25.1976
3 1505 CDS
ID metaerg.pl|14281
allec_ids 2.7.7.7; 3.1.11.1;
allgo_ids GO:0003824; GO:0003677; GO:0003887; GO:0008852; GO:0046872; GO:0006281; GO:0006260;
allko_ids K04486; K02347;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667402.1 3 493 evalue:5.2e-181 qcov:98.20 identity:67.10;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 13.288; 45.1329; 1.09148; 29.7523; 1.00104;
pfam_acc PF14792; PF14791; PF14520; PF02811;
pfam_desc DNA polymerase beta palm ; DNA polymerase beta thumb ; Helix-hairpin-helix domain; PHP domain;
pfam_id DNA_pol_B_palm; DNA_pol_B_thumb; HHH_5; PHP;
pfam_target db:Pfam-A.hmm|PF14792.6 evalue:8.3e-06 score:25.2 best_domain_score:24.1 name:DNA_pol_B_palm; db:Pfam-A.hmm|PF14791.6 evalue:6.9e-20 score:70.2 best_domain_score:69.3 name:DNA_pol_B_thumb; db:Pfam-A.hmm|PF14520.6 evalue:1.4e-08 score:34.5 best_domain_score:34.5 name:HHH_5; db:Pfam-A.hmm|PF02811.19 evalue:1.1e-08 score:34.8 best_domain_score:33.4 name:PHP;
sprot_desc DNA polymerase/3'-5' exonuclease PolX;
sprot_id sp|P94544|POLX_BACSU;
sprot_target db:uniprot_sprot|sp|P94544|POLX_BACSU 3 483 evalue:5.1e-74 qcov:96.20 identity:35.50;
1502 2146 CDS
ID metaerg.pl|14282
allec_ids 3.2.2.-;
allgo_ids GO:0003677; GO:0003905; GO:0006284;
allko_ids K03652;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669755.1 27 214 evalue:2.4e-58 qcov:87.90 identity:64.90;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 13.288; 45.1329; 1.09148; 29.7523; 1.00104;
metacyc_pathway_id PWY-5381; PWY-2681;
metacyc_pathway_name pyridine nucleotide cycling (plants);; trans-zeatin biosynthesis;;
metacyc_pathway_type NAD-Metabolism;; CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF02245;
pfam_desc Methylpurine-DNA glycosylase (MPG);
pfam_id Pur_DNA_glyco;
pfam_target db:Pfam-A.hmm|PF02245.16 evalue:7.6e-51 score:171.2 best_domain_score:171.0 name:Pur_DNA_glyco;
sprot_desc Putative 3-methyladenine DNA glycosylase;
sprot_id sp|Q0SI65|3MGH_RHOJR;
sprot_target db:uniprot_sprot|sp|Q0SI65|3MGH_RHOJR 27 213 evalue:4.9e-26 qcov:87.40 identity:43.80;
tigrfam_acc TIGR00567;
tigrfam_desc DNA-3-methyladenine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name 3mg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00567 evalue:5.7e-44 score:149.1 best_domain_score:149.0 name:TIGR00567;
>Feature NODE_52064_length_2996_cov_104.465
1680 1 bac_23SrRNA
ID metaerg.pl|14283
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 117.226; 0.103303; 5.90654; 110.444; 0.771961;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP019915.1811089.1814002 1 1680 evalue:0.0 qcov:100 identity:97.798;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae;Halomonas;
1977 1902 tRNA
ID metaerg.pl|14284
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 117.226; 0.103303; 5.90654; 110.444; 0.771961;
name tRNA_Ala_tgc;
2172 2096 tRNA
ID metaerg.pl|14285
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 117.226; 0.103303; 5.90654; 110.444; 0.771961;
name tRNA_Ile_gat;
2996 2371 bac_16SrRNA
ID metaerg.pl|14286
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 117.226; 0.103303; 5.90654; 110.444; 0.771961;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KF859622.1.1497 35 626 evalue:0.0 qcov:95 identity:97.297;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Catenococcus;
2673 2470 CDS
ID metaerg.pl|14287
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Methylococcales;f__Methylomonadaceae;g__KS41;s__KS41 sp002862125;
genomedb_acc GCA_002862125.1;
genomedb_target db:genomedb|GCA_002862125.1|PHSP01000001.1_1115 1 66 evalue:1.6e-21 qcov:98.50 identity:84.80;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 117.226; 0.103303; 5.90654; 110.444; 0.771961;
>Feature NODE_53136_length_2953_cov_3.62353
726 28 euk_28SrRNA
ID metaerg.pl|14288
Name euk_28SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.10239; 6.80735; 0.106671; 6.42169; 0.176597;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
1100 1030 euk_5_8SrRNA
ID metaerg.pl|14289
Name euk_5_8SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.10239; 6.80735; 0.106671; 6.42169; 0.176597;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
2831 1145 euk_18SrRNA
ID metaerg.pl|14290
Name euk_18SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.10239; 6.80735; 0.106671; 6.42169; 0.176597;
rRNA_target RNA_target=db:silva_SSURef_Nr99.fasta|novalid;
rRNA_taxon unknown;
1457 1197 CDS
ID metaerg.pl|14291
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.10239; 6.80735; 0.106671; 6.42169; 0.176597;
>Feature NODE_54537_length_2896_cov_22.4555
1 616 bac_16SrRNA
ID metaerg.pl|14292
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 70.0696; 17.8456; 7.90422; 21.7644; 22.5554;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ152877.1.1497 1 603 evalue:0.0 qcov:98 identity:92.635;
rRNA_taxon Bacteria;Gemmatimonadetes;Longimicrobia;Longimicrobiales;
848 2896 bac_23SrRNA
ID metaerg.pl|14293
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 70.0696; 17.8456; 7.90422; 21.7644; 22.5554;
rRNA_target rRNA_target=db:silva_LSURef.fasta|EU686590.2854.5810 22 2049 evalue:0.0 qcov:99 identity:81.610;
rRNA_taxon Bacteria;Gemmatimonadetes;
964 1188 CDS
ID metaerg.pl|14294
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 70.0696; 17.8456; 7.90422; 21.7644; 22.5554;
1816 1613 CDS
ID metaerg.pl|14295
genomedb_OC d__Bacteria;p__Bacteroidota;c__Kapabacteria;o__Kapabacteriales;f__UBA7675;g__UBA7675;s__UBA7675 sp002483085;
genomedb_acc GCA_002483085.1;
genomedb_target db:genomedb|GCA_002483085.1|DLHF01000033.1_71 18 67 evalue:1.6e-13 qcov:74.60 identity:76.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 70.0696; 17.8456; 7.90422; 21.7644; 22.5554;
>Feature NODE_55666_length_2851_cov_11.6406
1 288 CDS
ID metaerg.pl|14296
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Natrialbaceae;g__Natronococcus;s__Natronococcus occultus;
genomedb_acc GCF_000328685.1;
genomedb_target db:genomedb|GCF_000328685.1|WP_015320961.1 2 94 evalue:5.3e-26 qcov:97.90 identity:66.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 15.1629; 0.0540541; ; 15.1088;
979 865 arc_5SrRNA
ID metaerg.pl|14297
Name arc_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 15.1629; 0.0540541; ; 15.1088;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
2851 1133 arc_23SrRNA
ID metaerg.pl|14298
Name arc_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 15.1629; 0.0540541; ; 15.1088;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ARPH01000006.1103255.1105248 12 1719 evalue:0.0 qcov:99 identity:95.728;
rRNA_taxon Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Haloferacaceae;
>Feature NODE_56948_length_2800_cov_140.857
1 623 bac_16SrRNA
ID metaerg.pl|14299
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 310.447; ; 303.092; 7.02302; 0.332075;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|AB294176.1.1526 1 607 evalue:0.0 qcov:97 identity:97.545;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Alkalibacterium;
845 2800 bac_23SrRNA
ID metaerg.pl|14300
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 310.447; ; 303.092; 7.02302; 0.332075;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JANL01000030.173.3087 1 1956 evalue:0.0 qcov:100 identity:97.190;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Alkalibacterium;
>Feature NODE_57108_length_2795_cov_12.965
204 278 tRNA
ID metaerg.pl|14301
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 34.9089; 4.76597; 10.6911; 14.262; 5.18979;
name tRNA_Ile_gat;
400 474 tRNA
ID metaerg.pl|14302
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 34.9089; 4.76597; 10.6911; 14.262; 5.18979;
name tRNA_Ala_tgc;
841 2795 bac_23SrRNA
ID metaerg.pl|14303
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 34.9089; 4.76597; 10.6911; 14.262; 5.18979;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CENN01001979.661.3090 9 1955 evalue:0.0 qcov:99 identity:84.224;
rRNA_taxon Bacteria;Bacteroidetes;
>Feature NODE_58218_length_2755_cov_50.8648
167 274 bac_5SrRNA
ID metaerg.pl|14304
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.693666; 78.7628; 0.214203; 0.625336; 80.296;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
461 1483 CDS
ID metaerg.pl|14305
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667408.1 3 333 evalue:6.5e-58 qcov:97.40 identity:47.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.693666; 78.7628; 0.214203; 0.625336; 80.296;
2753 1674 CDS
ID metaerg.pl|14306
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_083441690.1 27 359 evalue:5.2e-122 qcov:92.80 identity:65.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.693666; 78.7628; 0.214203; 0.625336; 80.296;
pfam_acc PF00753;
pfam_desc Metallo-beta-lactamase superfamily;
pfam_id Lactamase_B;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:1.5e-20 score:73.3 best_domain_score:72.5 name:Lactamase_B;
>Feature NODE_58216_length_2755_cov_96.41
333 1 CDS
ID metaerg.pl|14307
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Endozoicomonadaceae;g__Kistimonas;s__Kistimonas sp002238585;
genomedb_acc GCA_002238585.1;
genomedb_target db:genomedb|GCA_002238585.1|MPMQ01000002.1_44 2 99 evalue:9.0e-17 qcov:88.30 identity:55.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 58.5762; 200.546; 73.9735; 159.652; 492.748;
2 2739 bac_23SrRNA
ID metaerg.pl|14308
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 58.5762; 200.546; 73.9735; 159.652; 492.748;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FXBL01000004.4711416.4714216 151 2738 evalue:0.0 qcov:95 identity:91.385;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;
2608 2150 CDS
ID metaerg.pl|14309
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Phyllobacterium;s__Phyllobacterium sp900473335;
genomedb_acc GCA_900473335.1;
genomedb_target db:genomedb|GCA_900473335.1|UCNP01000068.1_2 1 152 evalue:4.6e-72 qcov:100.00 identity:88.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 58.5762; 200.546; 73.9735; 159.652; 492.748;
>Feature NODE_58427_length_2748_cov_3.61975
1 1044 CDS
ID metaerg.pl|14310
allec_ids 3.5.1.81;
allgo_ids GO:0016787; GO:0005737; GO:0047420;
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Caldisalinibacteraceae;g__Caldisalinibacter;s__Caldisalinibacter kiritimatiensis;
genomedb_acc GCF_000387765.1;
genomedb_target db:genomedb|GCF_000387765.1|WP_006307383.1 1 338 evalue:1.3e-117 qcov:97.40 identity:62.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 6.4642; ; 6.43803; 0.026174;
pfam_acc PF01979; PF07969;
pfam_desc Amidohydrolase family; Amidohydrolase family;
pfam_id Amidohydro_1; Amidohydro_3;
pfam_target db:Pfam-A.hmm|PF01979.20 evalue:5.5e-12 score:44.9 best_domain_score:41.1 name:Amidohydro_1; db:Pfam-A.hmm|PF07969.11 evalue:5.1e-17 score:61.7 best_domain_score:53.5 name:Amidohydro_3;
sprot_desc D-aminoacylase;
sprot_id sp|P72349|NDAD_ALCXX;
sprot_target db:uniprot_sprot|sp|P72349|NDAD_ALCXX 1 338 evalue:2.7e-42 qcov:97.40 identity:34.20;
1077 1493 CDS
ID metaerg.pl|14311
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 6.4642; ; 6.43803; 0.026174;
1487 2251 CDS
ID metaerg.pl|14312
allgo_ids GO:0005654; GO:0016805; GO:0006508; GO:0032268;
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Natronincolaceae;g__Alkaliphilus_A;s__Alkaliphilus_A metalliredigens;
genomedb_acc GCF_000016985.1;
genomedb_target db:genomedb|GCF_000016985.1|WP_011971194.1 1 254 evalue:4.7e-85 qcov:100.00 identity:63.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 6.4642; ; 6.43803; 0.026174;
pfam_acc PF07687;
pfam_desc Peptidase dimerisation domain;
pfam_id M20_dimer;
pfam_target db:Pfam-A.hmm|PF07687.14 evalue:1.2e-09 score:37.3 best_domain_score:36.4 name:M20_dimer;
sprot_desc Peptidase M20 domain-containing protein 2;
sprot_id sp|A3KG59|P20D2_MOUSE;
sprot_target db:uniprot_sprot|sp|A3KG59|P20D2_MOUSE 1 249 evalue:2.6e-42 qcov:98.00 identity:37.70;
2748 2675 bac_5SrRNA
ID metaerg.pl|14313
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 6.4642; ; 6.43803; 0.026174;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_61158_length_2653_cov_34.7798
312 1 CDS
ID metaerg.pl|14314
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 20.9541; ; 20.9541; ;
910 728 CDS
ID metaerg.pl|14315
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 20.9541; ; 20.9541; ;
2022 2321 CDS
ID metaerg.pl|14316
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 20.9541; ; 20.9541; ;
2342 2653 CDS
ID metaerg.pl|14317
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 20.9541; ; 20.9541; ;
>Feature NODE_61377_length_2645_cov_6.54247
1009 1689 CDS
ID metaerg.pl|14318
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.6004; 50.4629; 1.37996; 10.4156; 37.0669;
2439 2215 CDS
ID metaerg.pl|14319
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.6004; 50.4629; 1.37996; 10.4156; 37.0669;
>Feature NODE_61773_length_2631_cov_53.6002
1 1859 bac_23SrRNA
ID metaerg.pl|14320
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.158404; 0.117694; 31.3503; 0.0592503; 31.6856;
rRNA_target rRNA_target=db:silva_LSURef.fasta|GU567979.18766.21740 1 1859 evalue:0.0 qcov:100 identity:84.831;
rRNA_taxon Bacteria;Gemmatimonadetes;
773 288 CDS
ID metaerg.pl|14321
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.158404; 0.117694; 31.3503; 0.0592503; 31.6856;
2631 1837 CDS
ID metaerg.pl|14322
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.158404; 0.117694; 31.3503; 0.0592503; 31.6856;
1966 2077 bac_5SrRNA
ID metaerg.pl|14323
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.158404; 0.117694; 31.3503; 0.0592503; 31.6856;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_61823_length_2630_cov_5.79728
569 258 CDS
ID metaerg.pl|14324
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.9101; ; 10.9101; ; ;
310 697 euk_28SrRNA
ID metaerg.pl|14325
Name euk_28SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.9101; ; 10.9101; ; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
816 1130 CDS
ID metaerg.pl|14326
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.9101; ; 10.9101; ; ;
1233 1613 CDS
ID metaerg.pl|14327
allec_ids 2.1.1.-;
allgo_ids GO:0008168; GO:0005730; GO:0005634; GO:0032040; GO:0070037; GO:0019843; GO:0001824; GO:0017126; GO:0070475;
allko_ids K14568;
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Chlorophyceae;o__Chlamydomonadales;f__Volvocaceae;g__Volvox;s__Volvox carteri;;
genomedb_acc GCF_000143455.1;
genomedb_target db:genomedb|GCF_000143455.1|XP_002955282.1 36 126 evalue:3.2e-18 qcov:72.20 identity:51.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.9101; ; 10.9101; ; ;
metacyc_pathway_id PWY-6477; PWY-5467; PWY-6575; PWY-6442; CODH-PWY; PWY-5041; PWY-4021; ALL-CHORISMATE-PWY; PWY-3542; PWY-6153; PWY-1061; PWY-5876; PWY-5975; PWY-5864; PWY-5305; PWYG-321; PWY-6113; PWY-5729; PWY-1422; PWY-5209; PWY-5855; PWY-6151; PWY-5857; PWY-6303; METH-ACETATE-PWY; PWY-5856; PWY-6142; UBISYN-PWY; PWY-6154; PWY-6424; CO2FORM-PWY; PWY-5116; PWY-1581; METHIONINE-DEG1-PWY; PWY-5328; PWY-5773; PWY-6519; PWY-5135; BIOTIN-BIOSYNTHESIS-PWY; PWY-6146; PWY-6427; PWY-6395; PWY-5479; PWY-5987; PWY-6292;
metacyc_pathway_name gibberellin inactivation II (methylation);; gramine biosynthesis;; juvenile hormone III biosynthesis I;; spermidine hydroxycinnamic acid conjugates biosynthesis;; reductive acetyl coenzyme A pathway I (homoacetogenic bacteria);; S-adenosyl-L-methionine cycle II;; β-alanine betaine biosynthesis;; superpathway of chorismate metabolism;; choline biosynthesis II;; autoinducer AI-2 biosynthesis I;; homogalacturonan biosynthesis;; magnoflorine biosynthesis;; furaneol and mesifurane biosynthesis;; superpathway of plastoquinol biosynthesis;; bixin biosynthesis;; mycolate biosynthesis;; superpathway of mycolate biosynthesis;; vestitol and sativan biosynthesis;; vitamin E biosynthesis (tocopherols);; methyl-coenzyme M oxidation to CO2;; ubiquinol-7 biosynthesis (prokaryotic);; S-adenosyl-L-methionine cycle I;; ubiquinol-10 biosynthesis (prokaryotic);; methyl indole-3-acetate interconversion;; methanogenesis from acetate;; ubiquinol-9 biosynthesis (prokaryotic);; gluconeogenesis II (Methanobacterium thermoautotrophicum);; superpathway of ubiquinol-8 biosynthesis (prokaryotic);; autoinducer AI-2 biosynthesis II (Vibrio);; ; methanogenesis from methanol;; sakuranetin biosynthesis;; plastoquinol-9 biosynthesis I;; L-methionine degradation I (to L-homocysteine);; superpathway of L-methionine salvage and degradation;; gossypol biosynthesis;; 8-amino-7-oxononanoate biosynthesis I;; xanthohumol biosynthesis;; biotin biosynthesis I;; Methanobacterium thermoautotrophicum biosynthetic metabolism;; rot-2'-enonate biosynthesis;; superpathway of seleno-compound metabolism;; 6-methoxypodophyllotoxin biosynthesis;; sorgoleone biosynthesis;; superpathway of L-cysteine biosynthesis (mammalian);;
metacyc_pathway_type GIBBERELLINS-DEGRADATION; Gibberellin-Inactivation; Metabolic-Clusters;; INDOLE-ALKALOIDS;; HORMONE-SYN; JH-III-Biosynthesis;; N-CONTAINING-SECONDARY-CMPD-SYN;; Autotrophic-CO2-Fixation;; S-adenosyl-L-methionine-cycle;; Betaine-Biosynthesis; MISCELLANEOUS-DEG;; Super-Pathways;; Choline-Biosynthesis;; Autoinducer-Biosynthesis;; PRIMARY-CELL-WALL; Polysaccharides-Biosynthesis;; ISOQUINOLINE-ALKALOIDS;; SECONDARY-METABOLITE-BIOSYNTHESIS;; Plastoquinone-Biosynthesis; Super-Pathways;; APOCAROTENOID-SYN;; Fatty-acid-biosynthesis;; Fatty-acid-biosynthesis; Super-Pathways;; ISOFLAVONOID-SYN;; Quinone-Biosynthesis; Vitamin-Biosynthesis;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; S-adenosyl-L-methionine-cycle; Super-Pathways;; Ubiquinone-Biosynthesis;; Auxin-Biosynthesis; Interconversion;; METHANOGENESIS;; Ubiquinone-Biosynthesis;; Gluconeogenesis; Super-Pathways;; Super-Pathways; Ubiquinone-Biosynthesis;; Autoinducer-Biosynthesis;; ; C1-COMPOUNDS; METHANOGENESIS;; FLAVANONES-SYN; FLAVONOID-PHYTOALEXINS;; Plastoquinone-Biosynthesis;; METHIONINE-DEG;; METHIONINE-DEG; Super-Pathways;; SESQUITERPENOID-SYN;; 7-Keto-8-aminopelargonate-Biosynthesis;; PRENYLFLAVONOID-SYN;; BIOTIN-SYN; Super-Pathways;; Biosynthesis; Super-Pathways;; Rotenoids-Biosynthesis;; Other-Amino-Acid-Biosynthesis; Seleno-Amino-Acid-Detoxification; Super-Pathways;; LIGNAN-SYN;; QUINONE-SYN;; CYSTEINE-SYN; Super-Pathways;;
pfam_acc PF03587;
pfam_desc EMG1/NEP1 methyltransferase;
pfam_id EMG1;
pfam_target db:Pfam-A.hmm|PF03587.14 evalue:2.9e-16 score:58.9 best_domain_score:58.9 name:EMG1;
sp YES;
sprot_desc Ribosomal RNA small subunit methyltransferase NEP1;
sprot_id sp|O35130|NEP1_MOUSE;
sprot_target db:uniprot_sprot|sp|O35130|NEP1_MOUSE 36 126 evalue:9.7e-14 qcov:72.20 identity:42.90;
tm_num 1;
1233 1337 signal_peptide
ID metaerg.pl|14328
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.9101; ; 10.9101; ; ;
1233 1613 transmembrane_helix
ID metaerg.pl|14329
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.9101; ; 10.9101; ; ;
topology i1266-1334o;
>Feature NODE_63047_length_2592_cov_5.19748
122 2528 bac_23SrRNA
ID metaerg.pl|14330
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.60115; 8.98894; 1.27396; 15.2559; 0.391892;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
629 865 CDS
ID metaerg.pl|14331
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.60115; 8.98894; 1.27396; 15.2559; 0.391892;
>Feature NODE_63383_length_2582_cov_3.80174
334 65 CDS
ID metaerg.pl|14332
allgo_ids GO:0009706; GO:0016021; GO:0015031;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.56661; ; ; 6.56661; ;
sprot_desc hypothetical protein;
sprot_id sp|Q06GT8|TI214_DRIGR;
sprot_target db:uniprot_sprot|sp|Q06GT8|TI214_DRIGR 1 72 evalue:7.8e-10 qcov:80.90 identity:47.40;
1163 1236 tRNA
ID metaerg.pl|14333
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.56661; ; ; 6.56661; ;
name tRNA_Asn_gtt;
1562 1488 tRNA
ID metaerg.pl|14334
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.56661; ; ; 6.56661; ;
name tRNA_Arg_acg;
1937 1824 bac_5SrRNA
ID metaerg.pl|14335
Name bac_5SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.56661; ; ; 6.56661; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AWOK01545868.860.3822 1 114 evalue:9.95e-49 qcov:100 identity:97.368;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Chloroplast;
2582 2170 bac_23SrRNA
ID metaerg.pl|14336
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.56661; ; ; 6.56661; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|APNO01004332.16500.19475 1 413 evalue:0.0 qcov:100 identity:99.516;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Chloroplast;
>Feature NODE_63959_length_2563_cov_10.26
894 442 CDS
ID metaerg.pl|14337
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 14.8993; ; ; 14.8993;
690 2563 euk_28SrRNA
ID metaerg.pl|14338
Name euk_28SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 14.8993; ; ; 14.8993;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ABPE01001451.12264.15803 1 1874 evalue:0.0 qcov:100 identity:97.225;
rRNA_taxon Eukaryota;Opisthokonta;Nucletmycea;Fungi;Dikarya;Ascomycota;
1581 1075 CDS
ID metaerg.pl|14339
genomedb_OC d__Eukaryota;no__Opisthokonta;p__Ascomycota;no__saccharomyceta;no__leotiomyceta;no__sordariomyceta;c__Sordariomycetes;o__Hypocreales;f__Nectriaceae;g__Fusarium;s__Fusarium fujikuroi species complex;s__Fusarium fujikuroi;;
genomedb_acc GCF_900079805.1;
genomedb_target db:genomedb|GCF_900079805.1|XP_023427131.1 1 129 evalue:3.9e-48 qcov:76.80 identity:75.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 14.8993; ; ; 14.8993;
2175 1933 CDS
ID metaerg.pl|14340
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 14.8993; ; ; 14.8993;
>Feature NODE_64789_length_2538_cov_36.4342
477 1 bac_16SrRNA
ID metaerg.pl|14341
Name bac_16SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.23744; 59.0469; 4.85972; 72.8287; 4.68467;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JN178384.1.1519 1 473 evalue:0.0 qcov:99 identity:97.257;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;Nitriliruptoraceae;
3 233 CDS
ID metaerg.pl|14342
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes;s__Actinoplanes liguriensis;
genomedb_acc GCA_000715855.1;
genomedb_target db:genomedb|GCA_000715855.1|KL571202.1_1 1 76 evalue:1.1e-18 qcov:100.00 identity:73.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.23744; 59.0469; 4.85972; 72.8287; 4.68467;
2051 1341 CDS
ID metaerg.pl|14343
allec_ids 3.2.2.-;
allgo_ids GO:0003677; GO:0003905; GO:0006284;
allko_ids K03652;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669755.1 22 231 evalue:4.1e-51 qcov:89.00 identity:59.20;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.23744; 59.0469; 4.85972; 72.8287; 4.68467;
metacyc_pathway_id PWY-5381; PWY-2681;
metacyc_pathway_name pyridine nucleotide cycling (plants);; trans-zeatin biosynthesis;;
metacyc_pathway_type NAD-Metabolism;; CYTOKININ-BIOSYNTHESIS;;
pfam_acc PF02245;
pfam_desc Methylpurine-DNA glycosylase (MPG);
pfam_id Pur_DNA_glyco;
pfam_target db:Pfam-A.hmm|PF02245.16 evalue:1.4e-51 score:173.7 best_domain_score:173.5 name:Pur_DNA_glyco;
sprot_desc Putative 3-methyladenine DNA glycosylase;
sprot_id sp|Q5YYA5|3MGH_NOCFA;
sprot_target db:uniprot_sprot|sp|Q5YYA5|3MGH_NOCFA 28 231 evalue:1.2e-33 qcov:86.40 identity:45.20;
tigrfam_acc TIGR00567;
tigrfam_desc DNA-3-methyladenine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name 3mg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00567 evalue:2.7e-45 score:153.4 best_domain_score:153.2 name:TIGR00567;
2536 2048 CDS
ID metaerg.pl|14344
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667402.1 1 155 evalue:5.7e-52 qcov:95.70 identity:69.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.23744; 59.0469; 4.85972; 72.8287; 4.68467;
>Feature NODE_66123_length_2498_cov_94.4433
364 1 bac_16SrRNA
ID metaerg.pl|14345
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 18.2572; 21.4089; 147.095; 9.60775; 196.369;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KU569325.1.1455 1 360 evalue:0.0 qcov:99 identity:99.444;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Phormidesmiales;Nodosilineaceae;Nodosilinea PCC-7104;
2013 1405 CDS
ID metaerg.pl|14346
allgo_ids GO:0003677;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO33344.1 1 202 evalue:3.0e-103 qcov:100.00 identity:97.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 18.2572; 21.4089; 147.095; 9.60775; 196.369;
pfam_acc PF14246; PF00440;
pfam_desc AefR-like transcriptional repressor, C-terminal domain; Bacterial regulatory proteins, tetR family;
pfam_id TetR_C_7; TetR_N;
pfam_target db:Pfam-A.hmm|PF14246.6 evalue:1.9e-08 score:33.6 best_domain_score:32.6 name:TetR_C_7; db:Pfam-A.hmm|PF00440.23 evalue:9.1e-19 score:66.2 best_domain_score:65.4 name:TetR_N;
2498 2298 CDS
ID metaerg.pl|14347
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea nodulosa;
genomedb_acc GCF_000309385.1;
genomedb_target db:genomedb|GCF_000309385.1|WP_083887154.1 1 66 evalue:6.3e-18 qcov:100.00 identity:78.80;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 18.2572; 21.4089; 147.095; 9.60775; 196.369;
pfam_acc PF13767;
pfam_desc Domain of unknown function (DUF4168);
pfam_id DUF4168;
pfam_target db:Pfam-A.hmm|PF13767.6 evalue:2.7e-09 score:37.3 best_domain_score:37.0 name:DUF4168;
>Feature NODE_68985_length_2417_cov_16.6566
2 99 bac_5SrRNA
ID metaerg.pl|14348
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 29.6855; 0.724305; ; 28.9612;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
3 221 CDS
ID metaerg.pl|14349
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 29.6855; 0.724305; ; 28.9612;
2115 241 CDS
ID metaerg.pl|14350
allgo_ids GO:0003677; GO:0004803; GO:0006313;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__Algoriphagus;s__Algoriphagus resistens;
genomedb_acc GCF_001442615.1;
genomedb_target db:genomedb|GCF_001442615.1|WP_057940598.1 1 624 evalue:7.1e-236 qcov:100.00 identity:67.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 29.6855; 0.724305; ; 28.9612;
pfam_acc PF01609;
pfam_desc domain;
pfam_id DDE_Tnp_1;
pfam_target db:Pfam-A.hmm|PF01609.21 evalue:2.4e-14 score:52.7 best_domain_score:50.5 name:DDE_Tnp_1;
>Feature NODE_69170_length_2412_cov_9.82902
534 3 bac_16SrRNA
ID metaerg.pl|14351
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.62113; 18.9982; 2.16313; 2.75729; 10.4567;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ152979.1.1464 2 490 evalue:0.0 qcov:92 identity:95.112;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Flavobacteriales;Cryomorphaceae;
1981 944 CDS
ID metaerg.pl|14352
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.62113; 18.9982; 2.16313; 2.75729; 10.4567;
pfam_acc PF00106; PF13561; PF08659;
pfam_desc short chain dehydrogenase; Enoyl-(Acyl carrier protein) reductase; KR domain;
pfam_id adh_short; adh_short_C2; KR;
pfam_target db:Pfam-A.hmm|PF00106.25 evalue:4.7e-35 score:120.1 best_domain_score:119.2 name:adh_short; db:Pfam-A.hmm|PF13561.6 evalue:4.3e-21 score:74.8 best_domain_score:74.2 name:adh_short_C2; db:Pfam-A.hmm|PF08659.10 evalue:6.2e-12 score:45.0 best_domain_score:44.5 name:KR;
>Feature NODE_69703_length_2398_cov_11.2625
1618 284 CDS
ID metaerg.pl|14353
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090722.1 1 444 evalue:4.6e-213 qcov:100.00 identity:83.30;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 12.1517; ; ; 12.1517;
2172 2057 bac_5SrRNA
ID metaerg.pl|14354
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 12.1517; ; ; 12.1517;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_71468_length_2351_cov_7.0135
1 747 CDS
ID metaerg.pl|14355
allgo_ids GO:0005525; GO:0005737; GO:0003924; GO:0003746;
allko_ids K02355;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D;s__Pseudomonas_D salegens;
genomedb_acc GCF_900105655.1;
genomedb_target db:genomedb|GCF_900105655.1|WP_092387956.1 1 248 evalue:3.6e-130 qcov:100.00 identity:94.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.349841; 9.96729; 0.266697; 10.5838; ;
pfam_acc PF00679; PF14492; PF03764;
pfam_desc Elongation factor G C-terminus; Elongation Factor G, domain II; Elongation factor G, domain IV;
pfam_id EFG_C; EFG_II; EFG_IV;
pfam_target db:Pfam-A.hmm|PF00679.24 evalue:2.9e-30 score:103.4 best_domain_score:102.8 name:EFG_C; db:Pfam-A.hmm|PF14492.6 evalue:1.3e-06 score:27.6 best_domain_score:26.8 name:EFG_II; db:Pfam-A.hmm|PF03764.18 evalue:6.5e-44 score:147.8 best_domain_score:147.2 name:EFG_IV;
sprot_desc Elongation factor G 2;
sprot_id sp|Q3IJW9|EFG2_PSEHT;
sprot_target db:uniprot_sprot|sp|Q3IJW9|EFG2_PSEHT 1 248 evalue:4.1e-117 qcov:100.00 identity:83.90;
1787 813 CDS
ID metaerg.pl|14356
allec_ids 6.3.4.15;
allgo_ids GO:0006464; GO:0017053; GO:0005524; GO:0000984; GO:0009374; GO:0004077; GO:0003677; GO:0042803; GO:0009102; GO:0006768; GO:0009305; GO:0006355;
allko_ids K03524;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D;s__Pseudomonas_D salegens;
genomedb_acc GCF_900105655.1;
genomedb_target db:genomedb|GCF_900105655.1|WP_092387959.1 1 322 evalue:3.2e-163 qcov:99.40 identity:87.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.349841; 9.96729; 0.266697; 10.5838; ;
metacyc_pathway_id PWY0-1264;
metacyc_pathway_name biotin-carboxyl carrier protein assembly;;
metacyc_pathway_type Lipid-Biosynthesis;;
pfam_acc PF02237; PF03099; PF08279;
pfam_desc Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; HTH domain;
pfam_id BPL_C; BPL_LplA_LipB; HTH_11;
pfam_target db:Pfam-A.hmm|PF02237.17 evalue:4e-06 score:25.9 best_domain_score:24.9 name:BPL_C; db:Pfam-A.hmm|PF03099.19 evalue:6.6e-13 score:47.9 best_domain_score:47.0 name:BPL_LplA_LipB; db:Pfam-A.hmm|PF08279.12 evalue:3.6e-11 score:42.1 best_domain_score:41.4 name:HTH_11;
sprot_desc Bifunctional ligase/repressor BirA;
sprot_id sp|P06709|BIRA_ECOLI;
sprot_target db:uniprot_sprot|sp|P06709|BIRA_ECOLI 4 319 evalue:6.1e-52 qcov:97.50 identity:38.80;
tigrfam_acc TIGR00121;
tigrfam_desc biotin--[acetyl-CoA-carboxylase] ligase;
tigrfam_mainrole Protein fate;
tigrfam_name birA_ligase;
tigrfam_sub1role Protein modification and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00121 evalue:1.8e-52 score:177.4 best_domain_score:177.2 name:TIGR00121;
1862 2047 CDS
ID metaerg.pl|14357
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.349841; 9.96729; 0.266697; 10.5838; ;
2181 2068 bac_5SrRNA
ID metaerg.pl|14358
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.349841; 9.96729; 0.266697; 10.5838; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_72586_length_2322_cov_10.9956
163 87 tRNA
ID metaerg.pl|14359
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 23.5792; 4.76013; 0.266114; 14.1487; 4.40424;
name tRNA_Ile_gat;
362 286 tRNA
ID metaerg.pl|14360
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 23.5792; 4.76013; 0.266114; 14.1487; 4.40424;
name tRNA_Ala_tgc;
2166 701 bac_16SrRNA
ID metaerg.pl|14361
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 23.5792; 4.76013; 0.266114; 14.1487; 4.40424;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KF836207.1.1440 36 1461 evalue:0.0 qcov:97 identity:95.178;
rRNA_taxon Bacteria;Patescibacteria;Saccharimonadia;Saccharimonadales;
>Feature NODE_72782_length_2317_cov_82.286
1974 1 bac_23SrRNA
ID metaerg.pl|14362
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 36.4273; 56.2344; 8.79419; 106.088; 4.63175;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LT838813.5931525.5934412 1 1974 evalue:0.0 qcov:100 identity:92.628;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;
1540 2037 CDS
ID metaerg.pl|14363
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 36.4273; 56.2344; 8.79419; 106.088; 4.63175;
2188 2114 tRNA
ID metaerg.pl|14364
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 36.4273; 56.2344; 8.79419; 106.088; 4.63175;
name tRNA_Ala_tgc;
>Feature NODE_73443_length_2301_cov_6.2382
>Feature NODE_73507_length_2299_cov_34.7727
269 3 CDS
ID metaerg.pl|14365
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 26.423; ; 26.423;
tm_num 1;
269 3 transmembrane_helix
ID metaerg.pl|14366
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 26.423; ; 26.423;
topology i150-218o;
1682 804 CDS
ID metaerg.pl|14367
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 26.423; ; 26.423;
sp YES;
804 890 signal_peptide
ID metaerg.pl|14368
Note TAT;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 26.423; ; 26.423;
1722 1907 CDS
ID metaerg.pl|14369
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 26.423; ; 26.423;
2008 2298 CDS
ID metaerg.pl|14370
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 26.423; ; 26.423;
>Feature NODE_73552_length_2298_cov_102.479
1689 1 bac_23SrRNA
ID metaerg.pl|14371
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 352.098; 71.5298; 65.4767; 57.1224; 157.969;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP003989.3556779.3559678 1 1689 evalue:0.0 qcov:100 identity:97.751;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Ectothiorhodospirales;Ectothiorhodospiraceae;Thioalkalivibrio;
1959 1884 tRNA
ID metaerg.pl|14372
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 352.098; 71.5298; 65.4767; 57.1224; 157.969;
name tRNA_Ala_tgc;
2061 1985 tRNA
ID metaerg.pl|14373
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 352.098; 71.5298; 65.4767; 57.1224; 157.969;
name tRNA_Ile_gat;
>Feature NODE_73978_length_2288_cov_133.946
1 267 CDS
ID metaerg.pl|14374
allec_ids 1.3.1.12;
allgo_ids GO:0004665; GO:0006571; GO:0008977; GO:0055114;
allko_ids K04517;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071794902.1 1 87 evalue:4.6e-40 qcov:98.90 identity:95.40;
kegg_pathway_id 00401; 00400;
kegg_pathway_name Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.58372; 106.206; 2.26567; 3.70159; 117.757;
metacyc_pathway_id TYRSYN; ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY;
metacyc_pathway_name L-tyrosine biosynthesis I;; superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;;
metacyc_pathway_type TYROSINE-SYN;; Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;;
pfam_acc PF02153;
pfam_desc Prephenate dehydrogenase;
pfam_id PDH;
pfam_target db:Pfam-A.hmm|PF02153.17 evalue:1.3e-14 score:53.0 best_domain_score:52.8 name:PDH;
sprot_desc Prephenate dehydrogenase;
sprot_id sp|Q49XG5|TYRA_STAS1;
sprot_target db:uniprot_sprot|sp|Q49XG5|TYRA_STAS1 1 66 evalue:4.7e-07 qcov:75.00 identity:37.90;
285 1016 CDS
ID metaerg.pl|14375
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480031.1 1 243 evalue:6.4e-100 qcov:100.00 identity:74.60;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.58372; 106.206; 2.26567; 3.70159; 117.757;
pfam_acc PF06904;
pfam_desc Extensin-like protein C-terminus;
pfam_id Extensin-like_C;
pfam_target db:Pfam-A.hmm|PF06904.12 evalue:6.8e-50 score:168.8 best_domain_score:168.4 name:Extensin-like_C;
sp YES;
285 338 lipoprotein_signal_peptide
ID metaerg.pl|14376
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.58372; 106.206; 2.26567; 3.70159; 117.757;
1531 2288 bac_16SrRNA
ID metaerg.pl|14377
Name bac_16SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.58372; 106.206; 2.26567; 3.70159; 117.757;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|MEHT01000048.404.1852 5 758 evalue:0.0 qcov:99 identity:97.878;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseinatronobacter;
>Feature NODE_74149_length_2284_cov_10.0157
1315 92 CDS
ID metaerg.pl|14378
allec_ids 2.7.7.49;
casgene_acc pfam00078_RT_CAS-I:CAS-III;
casgene_name RT;
casgene_target db:casgenes.hmm|pfam00078_RT_CAS-I:CAS-III evalue:2.6e-49 score:166.9 best_domain_score:165.9 name:RT;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__Balneolaceae;g__Aliifodinibius;s__Aliifodinibius roseus;
genomedb_acc GCF_900129315.1;
genomedb_target db:genomedb|GCF_900129315.1|WP_073067169.1 1 404 evalue:1.5e-189 qcov:99.30 identity:80.20;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0229616; ; 15.0075; 0.0257732; 15.0562;
pfam_acc PF08388; PF00078;
pfam_desc Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase);
pfam_id GIIM; RVT_1;
pfam_target db:Pfam-A.hmm|PF08388.11 evalue:2.1e-17 score:62.2 best_domain_score:60.8 name:GIIM; db:Pfam-A.hmm|PF00078.27 evalue:5.8e-45 score:152.7 best_domain_score:152.2 name:RVT_1;
tigrfam_acc TIGR04416;
tigrfam_desc group II intron reverse transcriptase/maturase;
tigrfam_mainrole Mobile and extrachromosomal element functions;
tigrfam_name group_II_RT_mat;
tigrfam_sub1role Other;
tigrfam_target db:TIGRFAMs.hmm|TIGR04416 evalue:1.2e-123 score:411.8 best_domain_score:411.6 name:TIGR04416;
2026 1924 bac_5SrRNA
ID metaerg.pl|14379
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0229616; ; 15.0075; 0.0257732; 15.0562;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_74858_length_2267_cov_55.6343
1 768 bac_16SrRNA
ID metaerg.pl|14380
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 14.3325; 10.4709; 4.38214; 31.8871; 2.70146;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|AONB01000049.48.1571 1 756 evalue:0.0 qcov:98 identity:97.751;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Nitrincolaceae;Nitrincola;
1016 1092 tRNA
ID metaerg.pl|14381
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 14.3325; 10.4709; 4.38214; 31.8871; 2.70146;
name tRNA_Ile_gat;
1219 1294 tRNA
ID metaerg.pl|14382
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 14.3325; 10.4709; 4.38214; 31.8871; 2.70146;
name tRNA_Ala_tgc;
1599 1799 CDS
ID metaerg.pl|14383
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 14.3325; 10.4709; 4.38214; 31.8871; 2.70146;
1633 2267 bac_23SrRNA
ID metaerg.pl|14384
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 14.3325; 10.4709; 4.38214; 31.8871; 2.70146;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MBPP01000104.233.3145 1 635 evalue:0.0 qcov:100 identity:96.850;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Marinobacteraceae;
>Feature NODE_75834_length_2244_cov_9.05984
416 156 euk_28SrRNA
ID metaerg.pl|14385
Name euk_28SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 15.4011; ; 15.4011; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|HE610118.705.4008 1 261 evalue:5.31e-90 qcov:100 identity:89.552;
rRNA_taxon Eukaryota;Archaeplastida;
393 761 CDS
ID metaerg.pl|14386
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 15.4011; ; 15.4011; ;
sp YES;
393 446 signal_peptide
ID metaerg.pl|14387
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 15.4011; ; 15.4011; ;
1092 586 CDS
ID metaerg.pl|14388
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 15.4011; ; 15.4011; ;
1631 1089 CDS
ID metaerg.pl|14389
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 15.4011; ; 15.4011; ;
2242 1805 CDS
ID metaerg.pl|14390
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 15.4011; ; 15.4011; ;
>Feature NODE_76131_length_2238_cov_8.54466
1593 1378 CDS
ID metaerg.pl|14391
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 14.6643; ; 14.6643; ;
>Feature NODE_76415_length_2231_cov_141.256
61 136 tRNA
ID metaerg.pl|14392
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 13.3652; 169.767; 8.29313; 194.246; 2.82028;
name tRNA_Ala_tgc;
163 239 tRNA
ID metaerg.pl|14393
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 13.3652; 169.767; 8.29313; 194.246; 2.82028;
name tRNA_Ile_gat;
598 2230 bac_23SrRNA
ID metaerg.pl|14394
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 13.3652; 169.767; 8.29313; 194.246; 2.82028;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ARNL01000040.160481.163312 1 1630 evalue:0.0 qcov:99 identity:98.405;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Loktanella;
2229 1999 CDS
ID metaerg.pl|14395
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 13.3652; 169.767; 8.29313; 194.246; 2.82028;
>Feature NODE_76754_length_2223_cov_12.661
1396 1470 tRNA
ID metaerg.pl|14396
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 22.3546; ; ; 22.3546;
name tRNA_Gln_ttg;
1776 2222 CDS
ID metaerg.pl|14397
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 22.3546; ; ; 22.3546;
pfam_acc PF00361;
pfam_desc Proton-conducting membrane transporter;
pfam_id Proton_antipo_M;
pfam_target db:Pfam-A.hmm|PF00361.20 evalue:2.5e-05 score:22.9 best_domain_score:22.5 name:Proton_antipo_M;
tm_num 4;
1776 2222 transmembrane_helix
ID metaerg.pl|14398
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 22.3546; ; ; 22.3546;
topology i1821-1889o1899-1967i2028-2123o2151-2219i;
>Feature NODE_77087_length_2216_cov_3.66081
1069 1293 CDS
ID metaerg.pl|14399
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 6.17086; ; ; 6.17086; ;
2216 1608 bac_16SrRNA
ID metaerg.pl|14400
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 6.17086; ; ; 6.17086; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|AY928077.126168.127637 14 609 evalue:0.0 qcov:98 identity:99.664;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Chloroplast;
>Feature NODE_78119_length_2192_cov_29.5976
1433 2 bac_23SrRNA
ID metaerg.pl|14401
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 102.616; 17.3643; 29.6841; 17.6229; 37.9447;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LCZK01000010.268164.271226 1 1432 evalue:0.0 qcov:100 identity:95.251;
rRNA_taxon Bacteria;Actinobacteria;Acidimicrobiia;Microtrichales;Microtrichaceae;
2191 1687 bac_16SrRNA
ID metaerg.pl|14402
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 102.616; 17.3643; 29.6841; 17.6229; 37.9447;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ152677.1.1478 14 505 evalue:0.0 qcov:97 identity:99.593;
rRNA_taxon Bacteria;Actinobacteria;Acidimicrobiia;Microtrichales;Ilumatobacteraceae;uncultured;
2044 1721 CDS
ID metaerg.pl|14403
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nanopelagicales;f__Nanopelagicaceae;g__Planktophila;s__Planktophila sp000378885;
genomedb_acc GCA_000378885.1;
genomedb_target db:genomedb|GCA_000378885.1|KB900456.1_549 1 79 evalue:1.2e-26 qcov:73.80 identity:77.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 102.616; 17.3643; 29.6841; 17.6229; 37.9447;
>Feature NODE_79336_length_2164_cov_45.0308
1159 1 bac_16SrRNA
ID metaerg.pl|14404
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 50.1986; 18.3138; 4.92155; 79.571; 6.13704;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|GQ848206.1.1493 16 1156 evalue:0.0 qcov:98 identity:96.757;
rRNA_taxon Bacteria;Firmicutes;Clostridia;Clostridiales;Peptostreptococcaceae;
2163 1636 CDS
ID metaerg.pl|14405
allgo_ids GO:0016020; GO:0016021; GO:0005886;
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Peptostreptococcales;f__Natronincolaceae;g__Alkaliphilus;s__Alkaliphilus peptidifermentans;
genomedb_acc GCF_900101495.1;
genomedb_target db:genomedb|GCF_900101495.1|WP_091544253.1 2 155 evalue:8.3e-41 qcov:88.00 identity:58.40;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 50.1986; 18.3138; 4.92155; 79.571; 6.13704;
pfam_acc PF00892;
pfam_desc EamA-like transporter family;
pfam_id EamA;
pfam_target db:Pfam-A.hmm|PF00892.20 evalue:1.3e-22 score:79.7 best_domain_score:79.5 name:EamA;
sprot_desc Uncharacterized transporter YyaM;
sprot_id sp|P37511|YYAM_BACSU;
sprot_target db:uniprot_sprot|sp|P37511|YYAM_BACSU 10 155 evalue:9.3e-07 qcov:83.40 identity:24.30;
tm_num 5;
2163 1636 transmembrane_helix
ID metaerg.pl|14406
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 50.1986; 18.3138; 4.92155; 79.571; 6.13704;
topology o1693-1752i1777-1845o1873-1941i1978-2031o2044-2103i;
>Feature NODE_79486_length_2161_cov_91.7042
64 1 bac_5SrRNA
ID metaerg.pl|14407
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 100.114; 75.3018; 56.7185; 156.397; 388.531;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
1 528 CDS
ID metaerg.pl|14408
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__UBA1407;f__Lenti-02;g__Lenti-02;s__Lenti-02 sp001603055;
genomedb_acc GCA_001603055.1;
genomedb_target db:genomedb|GCA_001603055.1|LVAZ01000163.1_20 1 175 evalue:2.8e-20 qcov:100.00 identity:40.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 100.114; 75.3018; 56.7185; 156.397; 388.531;
2161 280 bac_23SrRNA
ID metaerg.pl|14409
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 100.114; 75.3018; 56.7185; 156.397; 388.531;
rRNA_target rRNA_target=db:silva_LSURef.fasta|GU568020.16979.19937 1 1882 evalue:0.0 qcov:100 identity:89.794;
rRNA_taxon Bacteria;Gemmatimonadetes;Gemmatimonadetes;
772 1332 CDS
ID metaerg.pl|14410
genomedb_OC d__Bacteria;p__Marinisomatota;c__AB16;o__AB16;f__46-47;g__46-47;s__46-47 sp001509335;
genomedb_acc GCA_001509335.1;
genomedb_target db:genomedb|GCA_001509335.1|KUK92035.1 3 178 evalue:1.4e-54 qcov:94.60 identity:66.50;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 100.114; 75.3018; 56.7185; 156.397; 388.531;
>Feature NODE_81670_length_2118_cov_116.979
1 1692 bac_23SrRNA
ID metaerg.pl|14411
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 35.6479; 283.162; 27.8968; 370.803; 24.0965;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LQBQ01000015.2665.5502 1 1691 evalue:0.0 qcov:99 identity:91.456;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;
838 263 CDS
ID metaerg.pl|14412
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Bin34;g__Bin34;s__Bin34 sp002238555;
genomedb_acc GCA_002238555.1;
genomedb_target db:genomedb|GCA_002238555.1|MPMO01000072.1_14 2 145 evalue:3.7e-34 qcov:75.40 identity:58.20;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 35.6479; 283.162; 27.8968; 370.803; 24.0965;
1561 1103 CDS
ID metaerg.pl|14413
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Stappiaceae;g__Pseudovibrio;s__Pseudovibrio sp001310715;
genomedb_acc GCA_001310715.1;
genomedb_target db:genomedb|GCA_001310715.1|BAXV01000158.1_3 1 151 evalue:8.2e-69 qcov:99.30 identity:87.40;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 35.6479; 283.162; 27.8968; 370.803; 24.0965;
1882 1994 bac_5SrRNA
ID metaerg.pl|14414
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 35.6479; 283.162; 27.8968; 370.803; 24.0965;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
2038 2114 tRNA
ID metaerg.pl|14415
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 35.6479; 283.162; 27.8968; 370.803; 24.0965;
name tRNA_Met_cat;
>Feature NODE_83120_length_2089_cov_82.5295
935 1 euk_28SrRNA
ID metaerg.pl|14416
Name euk_28SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00928314; 144.225; ; ; 144.234;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
1136 1552 CDS
ID metaerg.pl|14417
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00928314; 144.225; ; ; 144.234;
1557 1414 euk_5_8SrRNA
ID metaerg.pl|14418
Name euk_5_8SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.00928314; 144.225; ; ; 144.234;
rRNA_target rRNA_target=db:silva_LSURef.fasta|BBIL01000010.1160077.1163818 32 144 evalue:4.84e-33 qcov:78 identity:89.474;
rRNA_taxon Eukaryota;Opisthokonta;Nucletmycea;
>Feature NODE_84116_length_2070_cov_66.3737
2 397 bac_23SrRNA
ID metaerg.pl|14419
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 8.14167; 147.546; 9.62917; 7.70156; 122.073;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MEHS01000004.201703.204603 1 396 evalue:0.0 qcov:100 identity:99.495;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobaca;
745 164 CDS
ID metaerg.pl|14420
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Lentisphaeria;o__UBA1407;f__Lenti-02;g__Lenti-02;s__Lenti-02 sp001603055;
genomedb_acc GCA_001603055.1;
genomedb_target db:genomedb|GCA_001603055.1|LVAZ01000163.1_20 37 193 evalue:8.0e-21 qcov:81.30 identity:41.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 8.14167; 147.546; 9.62917; 7.70156; 122.073;
tm_num 2;
745 164 transmembrane_helix
ID metaerg.pl|14421
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 8.14167; 147.546; 9.62917; 7.70156; 122.073;
topology i200-268o443-511i;
522 633 bac_5SrRNA
ID metaerg.pl|14422
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 8.14167; 147.546; 9.62917; 7.70156; 122.073;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
779 855 tRNA
ID metaerg.pl|14423
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 8.14167; 147.546; 9.62917; 7.70156; 122.073;
name tRNA_Met_cat;
1143 2069 CDS
ID metaerg.pl|14424
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobacter_A;s__Rhodobacter_A ovatus;
genomedb_acc GCF_900207575.1;
genomedb_target db:genomedb|GCF_900207575.1|WP_097031245.1 1 291 evalue:1.4e-147 qcov:94.20 identity:90.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 8.14167; 147.546; 9.62917; 7.70156; 122.073;
>Feature NODE_84926_length_2054_cov_13.4817
335 535 CDS
ID metaerg.pl|14425
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 17.4181; ; 17.4181;
1418 1708 CDS
ID metaerg.pl|14426
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 17.4181; ; 17.4181;
>Feature NODE_84988_length_2053_cov_12.4374
352 588 CDS
ID metaerg.pl|14427
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 15.3663; ; 15.3663; ;
747 953 CDS
ID metaerg.pl|14428
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 15.3663; ; 15.3663; ;
>Feature NODE_85512_length_2043_cov_93.3913
319 1849 bac_16SrRNA
ID metaerg.pl|14429
Name bac_16SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 1069.72; 0.238774; 1069.96; ;
rRNA_target RNA_target=db:silva_SSURef_Nr99.fasta|novalid;
rRNA_taxon unknown;
1201 1818 CDS
ID metaerg.pl|14430
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 1069.72; 0.238774; 1069.96; ;
>Feature NODE_85819_length_2037_cov_50.3219
3 77 tRNA
ID metaerg.pl|14431
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 48.9883; 2.40011; 9.08797; 35.3763; 2.12401;
name tRNA_Ile_gat;
142 217 tRNA
ID metaerg.pl|14432
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 48.9883; 2.40011; 9.08797; 35.3763; 2.12401;
name tRNA_Ala_tgc;
402 2037 bac_23SrRNA
ID metaerg.pl|14433
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 48.9883; 2.40011; 9.08797; 35.3763; 2.12401;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP007203.1452238.1454531 1 1636 evalue:0.0 qcov:100 identity:89.563;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;
>Feature NODE_86782_length_2019_cov_12.3915
843 1 bac_23SrRNA
ID metaerg.pl|14434
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 39.9599; 8.67469; 10.2964; 12.1391; 8.84965;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FQ032827.7137.10003 1 843 evalue:0.0 qcov:100 identity:85.346;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;
1106 1038 tRNA
ID metaerg.pl|14435
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 39.9599; 8.67469; 10.2964; 12.1391; 8.84965;
name tRNA_Arg_gcg;
1257 1183 tRNA
ID metaerg.pl|14436
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 39.9599; 8.67469; 10.2964; 12.1391; 8.84965;
name tRNA_Ala_tgc;
1341 1267 tRNA
ID metaerg.pl|14437
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 39.9599; 8.67469; 10.2964; 12.1391; 8.84965;
name tRNA_Ile_gat;
2019 1419 bac_16SrRNA
ID metaerg.pl|14438
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 39.9599; 8.67469; 10.2964; 12.1391; 8.84965;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ152979.1.1464 14 601 evalue:0.0 qcov:98 identity:96.939;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Flavobacteriales;Cryomorphaceae;
>Feature NODE_88234_length_1992_cov_6.84047
231 345 bac_5SrRNA
ID metaerg.pl|14439
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 11.8871; ; 11.8871; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
1991 447 CDS
ID metaerg.pl|14440
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Coleofasciculaceae;g__Coleofasciculus;s__Coleofasciculus sp000317515;
genomedb_acc GCF_000317515.1;
genomedb_target db:genomedb|GCF_000317515.1|WP_015185286.1 2 512 evalue:4.4e-199 qcov:99.40 identity:63.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 11.8871; ; 11.8871; ;
pfam_acc PF00753; PF12706; PF07521;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain; Zn-dependent metallo-hydrolase RNA specificity domain;
pfam_id Lactamase_B; Lactamase_B_2; RMMBL;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:8.2e-12 score:44.8 best_domain_score:44.0 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:8e-14 score:50.8 best_domain_score:48.9 name:Lactamase_B_2; db:Pfam-A.hmm|PF07521.12 evalue:2.5e-07 score:29.7 best_domain_score:28.5 name:RMMBL;
sprot_desc hypothetical protein;
sprot_id sp|Q55470|Y514_SYNY3;
sprot_target db:uniprot_sprot|sp|Q55470|Y514_SYNY3 1 508 evalue:7.2e-148 qcov:98.80 identity:47.40;
>Feature NODE_88383_length_1989_cov_120.406
3 725 CDS
ID metaerg.pl|14441
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468180.1 3 240 evalue:5.4e-99 qcov:99.20 identity:73.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 52.9869; 4.73844; 5.79065; 67.2936; 3.7776;
pfam_acc PF06904;
pfam_desc Extensin-like protein C-terminus;
pfam_id Extensin-like_C;
pfam_target db:Pfam-A.hmm|PF06904.12 evalue:5.4e-50 score:169.1 best_domain_score:168.8 name:Extensin-like_C;
sp YES;
3 47 lipoprotein_signal_peptide
ID metaerg.pl|14442
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 52.9869; 4.73844; 5.79065; 67.2936; 3.7776;
1232 1989 bac_16SrRNA
ID metaerg.pl|14443
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 52.9869; 4.73844; 5.79065; 67.2936; 3.7776;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|MEHT01000048.404.1852 5 758 evalue:0.0 qcov:99 identity:97.878;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseinatronobacter;
>Feature NODE_88481_length_1988_cov_4.0119
1988 1 euk_28SrRNA
ID metaerg.pl|14444
Name euk_28SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.604461; 6.89064; ; 7.4951; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_89615_length_1968_cov_8.09723
218 1012 CDS
ID metaerg.pl|14445
allec_ids 1.17.1.8;
allgo_ids GO:0008839; GO:0009089; GO:0055114; GO:0005737; GO:0051287; GO:0050661; GO:0016726; GO:0019877;
allko_ids K00215;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666621.1 1 264 evalue:2.0e-91 qcov:100.00 identity:68.20;
kegg_pathway_id 00300;
kegg_pathway_name Lysine biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.708471; 11.813; 0.582508; 10.2673; 0.254675;
pfam_acc PF05173; PF01113; PF01118;
pfam_desc Dihydrodipicolinate reductase, C-terminus; Dihydrodipicolinate reductase, N-terminus; Semialdehyde dehydrogenase, NAD binding domain;
pfam_id DapB_C; DapB_N; Semialdhyde_dh;
pfam_target db:Pfam-A.hmm|PF05173.14 evalue:6.9e-31 score:106.0 best_domain_score:105.5 name:DapB_C; db:Pfam-A.hmm|PF01113.20 evalue:7.9e-25 score:86.6 best_domain_score:86.1 name:DapB_N; db:Pfam-A.hmm|PF01118.24 evalue:2.8e-05 score:23.8 best_domain_score:22.2 name:Semialdhyde_dh;
sprot_desc 4-hydroxy-tetrahydrodipicolinate reductase;
sprot_id sp|B1VXZ4|DAPB_STRGG;
sprot_target db:uniprot_sprot|sp|B1VXZ4|DAPB_STRGG 4 264 evalue:3.1e-62 qcov:98.90 identity:52.60;
tigrfam_acc TIGR00036;
tigrfam_desc 4-hydroxy-tetrahydrodipicolinate reductase;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name dapB;
tigrfam_sub1role Aspartate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00036 evalue:1.9e-67 score:226.8 best_domain_score:226.6 name:TIGR00036;
1614 1967 bac_16SrRNA
ID metaerg.pl|14446
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.708471; 11.813; 0.582508; 10.2673; 0.254675;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|AB038407.1.1482 5 354 evalue:8.99e-161 qcov:99 identity:96.000;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;Nitriliruptoraceae;
>Feature NODE_89813_length_1965_cov_4.45131
1525 4 bac_16SrRNA
ID metaerg.pl|14447
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.7961; 0.339945; 6.2573; 6.62039; 1.57851;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KF912965.1.1483 36 1516 evalue:0.0 qcov:97 identity:96.896;
rRNA_taxon Bacteria;Planctomycetes;Planctomycetacia;Isosphaerales;Isosphaeraceae;
702 448 CDS
ID metaerg.pl|14448
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.7961; 0.339945; 6.2573; 6.62039; 1.57851;
>Feature NODE_90123_length_1959_cov_6.12973
371 3 CDS
ID metaerg.pl|14449
allec_ids 2.7.7.7;
allgo_ids GO:0006281; GO:0005737; GO:0003684; GO:0003887; GO:0000287; GO:0006261;
allko_ids K03515; K02346;
genomedb_OC d__Bacteria;p__Nitrospinota;c__Nitrospinia;o__Nitrospinales;f__Nitrospinaceae;g__21-14-0-20-56-8;s__21-14-0-20-56-8 sp002796165;
genomedb_acc GCA_002796165.1;
genomedb_target db:genomedb|GCA_002796165.1|PIQ95986.1 1 122 evalue:8.4e-32 qcov:99.20 identity:58.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 9.84577; ; 9.71863; ; 0.127142;
pfam_acc PF00817;
pfam_desc impB/mucB/samB family;
pfam_id IMS;
pfam_target db:Pfam-A.hmm|PF00817.20 evalue:2.3e-34 score:117.8 best_domain_score:117.7 name:IMS;
sprot_desc DNA polymerase IV;
sprot_id sp|A1WY69|DPO4_HALHL;
sprot_target db:uniprot_sprot|sp|A1WY69|DPO4_HALHL 5 118 evalue:3.8e-31 qcov:92.70 identity:56.10;
912 457 CDS
ID metaerg.pl|14450
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__21-64-14;f__21-64-14;g__21-64-14;s__21-64-14 sp002255365;
genomedb_acc GCA_002255365.1;
genomedb_target db:genomedb|GCA_002255365.1|OYV76405.1 10 143 evalue:1.0e-31 qcov:88.70 identity:54.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 9.84577; ; 9.71863; ; 0.127142;
pfam_acc PF03061; PF13279;
pfam_desc Thioesterase superfamily; Thioesterase-like superfamily;
pfam_id 4HBT; 4HBT_2;
pfam_target db:Pfam-A.hmm|PF03061.22 evalue:1.4e-12 score:47.0 best_domain_score:46.4 name:4HBT; db:Pfam-A.hmm|PF13279.6 evalue:5.9e-22 score:77.7 best_domain_score:77.5 name:4HBT_2;
1416 1959 bac_16SrRNA
ID metaerg.pl|14451
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 9.84577; ; 9.71863; ; 0.127142;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ152877.1.1497 44 544 evalue:0.0 qcov:92 identity:99.202;
rRNA_taxon Bacteria;Gemmatimonadetes;Longimicrobia;Longimicrobiales;Longimicrobiaceae;
>Feature NODE_90301_length_1956_cov_7.7112
1456 1956 CDS
ID metaerg.pl|14452
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Chlorophyceae;o__Chlamydomonadales;f__Volvocaceae;g__Volvox;s__Volvox carteri;;
genomedb_acc GCF_000143455.1;
genomedb_target db:genomedb|GCF_000143455.1|XP_002951744.1 33 149 evalue:1.6e-09 qcov:70.10 identity:36.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 12.8522; ; 12.8522;
>Feature NODE_90520_length_1952_cov_178.747
1952 1 bac_23SrRNA
ID metaerg.pl|14453
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 70.7814; 795.972; 69.0433; 609.186; 46.9617;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 1952 evalue:0.0 qcov:100 identity:93.095;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;
>Feature NODE_93653_length_1899_cov_24.4046
3 236 CDS
ID metaerg.pl|14454
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667402.1 1 69 evalue:7.4e-18 qcov:89.60 identity:66.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 3.91938; 11.5272; 1.98399; 3.67467; 21.1052;
240 929 CDS
ID metaerg.pl|14455
allec_ids 3.2.2.-;
allgo_ids GO:0003677; GO:0003905; GO:0006284;
allko_ids K03652;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052669755.1 18 223 evalue:3.4e-42 qcov:90.00 identity:54.00;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 3.91938; 11.5272; 1.98399; 3.67467; 21.1052;
metacyc_pathway_id PWY-2681; PWY-5381;
metacyc_pathway_name trans-zeatin biosynthesis;; pyridine nucleotide cycling (plants);;
metacyc_pathway_type CYTOKININ-BIOSYNTHESIS;; NAD-Metabolism;;
pfam_acc PF02245;
pfam_desc Methylpurine-DNA glycosylase (MPG);
pfam_id Pur_DNA_glyco;
pfam_target db:Pfam-A.hmm|PF02245.16 evalue:7.8e-49 score:164.7 best_domain_score:164.4 name:Pur_DNA_glyco;
sprot_desc Putative 3-methyladenine DNA glycosylase;
sprot_id sp|Q0SI65|3MGH_RHOJR;
sprot_target db:uniprot_sprot|sp|Q0SI65|3MGH_RHOJR 40 228 evalue:4.8e-35 qcov:82.50 identity:48.20;
tigrfam_acc TIGR00567;
tigrfam_desc DNA-3-methyladenine glycosylase;
tigrfam_mainrole DNA metabolism;
tigrfam_name 3mg;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR00567 evalue:4.4e-40 score:136.4 best_domain_score:136.2 name:TIGR00567;
1623 1897 bac_16SrRNA
ID metaerg.pl|14456
Name bac_16SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 3.91938; 11.5272; 1.98399; 3.67467; 21.1052;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|DQ432396.1.1501 5 274 evalue:4.33e-123 qcov:98 identity:96.324;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;Nitriliruptoraceae;
>Feature NODE_93836_length_1896_cov_103.772
1896 2 euk_28SrRNA
ID metaerg.pl|14457
Name euk_28SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 39.1575; 2598.16; 9.18385; 2656.62; 10.1214;
rRNA_target rRNA_target=db:silva_LSURef.fasta|HE610118.705.4008 1 1895 evalue:0.0 qcov:100 identity:94.989;
rRNA_taxon Eukaryota;Archaeplastida;
148 483 CDS
ID metaerg.pl|14458
genomedb_OC d__Eukaryota;p__Chlorophyta;c__Trebouxiophyceae;o__Chlorellales;f__Chlorellaceae;g__Auxenochlorella;s__Auxenochlorella protothecoides;;
genomedb_acc GCF_000733215.1;
genomedb_target db:genomedb|GCF_000733215.1|XP_011402158.1 1 111 evalue:4.7e-50 qcov:100.00 identity:91.00;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 39.1575; 2598.16; 9.18385; 2656.62; 10.1214;
>Feature NODE_94134_length_1892_cov_3.47578
1 1698 euk_28SrRNA
ID metaerg.pl|14459
Name euk_28SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.25775; 6.31745; 5.14409; 0.727899; 13.4472;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_94714_length_1882_cov_7.40175
372 1 CDS
ID metaerg.pl|14460
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 11.3955; ; 11.3955; ; ;
1823 1149 CDS
ID metaerg.pl|14461
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 11.3955; ; 11.3955; ; ;
>Feature NODE_96694_length_1851_cov_5.56236
115 189 tRNA
ID metaerg.pl|14462
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 6.9759; 9.00176; 16.0994; 7.48795; 39.565;
name tRNA_Ile_gat;
268 341 tRNA
ID metaerg.pl|14463
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 6.9759; 9.00176; 16.0994; 7.48795; 39.565;
name tRNA_Ala_tgc;
672 1851 bac_23SrRNA
ID metaerg.pl|14464
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 6.9759; 9.00176; 16.0994; 7.48795; 39.565;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_98757_length_1819_cov_3.95181
1 375 CDS
ID metaerg.pl|14465
allec_ids 2.2.1.6;
allgo_ids GO:0005948; GO:0005829; GO:0003984; GO:1990610; GO:0009097; GO:0009099;
allko_ids K01653;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Natronohydrobacter;s__Natronohydrobacter thiooxidans;
genomedb_acc GCF_001884735.1;
genomedb_target db:genomedb|GCF_001884735.1|WP_071798533.1 1 124 evalue:3.8e-56 qcov:100.00 identity:93.50;
kegg_pathway_id 00290; 00660; 00650; 00770;
kegg_pathway_name Valine, leucine and isoleucine biosynthesis; C5-Branched dibasic acid metabolism; Butanoate metabolism; Pantothenate and CoA biosynthesis;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.781306; 6.95986; ; 0.902337; 8.6435;
metacyc_pathway_id PWY-5939; ILEUSYN-PWY; BRANCHED-CHAIN-AA-SYN-PWY; PWY-6389; PWY-5104; PWY-6396; PWY-5103; PWY-5938; THREOCAT-PWY; PWY-3001; VALSYN-PWY; PWY-5101;
metacyc_pathway_name pyruvate fermentation to (R)-acetoin II;; L-isoleucine biosynthesis I (from threonine);; superpathway of branched chain amino acid biosynthesis;; pyruvate fermentation to (S)-acetoin;; L-isoleucine biosynthesis IV;; superpathway of 2,3-butanediol biosynthesis;; L-isoleucine biosynthesis III;; pyruvate fermentation to (R)-acetoin I;; superpathway of L-threonine metabolism;; superpathway of L-isoleucine biosynthesis I;; L-valine biosynthesis;; L-isoleucine biosynthesis II;;
metacyc_pathway_type Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; Amino-Acid-Biosynthesis; Super-Pathways;; Acetoin-Biosynthesis;; ISOLEUCINE-SYN;; Butanediol-Biosynthesis; Super-Pathways;; ISOLEUCINE-SYN;; Acetoin-Biosynthesis;; Super-Pathways; THREONINE-DEG;; ISOLEUCINE-SYN; Super-Pathways;; VALINE-BIOSYNTHESIS;; ISOLEUCINE-SYN;;
pfam_acc PF10369;
pfam_desc Small subunit of acetolactate synthase;
pfam_id ALS_ss_C;
pfam_target db:Pfam-A.hmm|PF10369.9 evalue:3e-28 score:97.1 best_domain_score:94.6 name:ALS_ss_C;
sprot_desc Probable acetolactate synthase small subunit;
sprot_id sp|Q57625|ILVH_METJA;
sprot_target db:uniprot_sprot|sp|Q57625|ILVH_METJA 9 123 evalue:7.5e-19 qcov:92.70 identity:42.20;
tigrfam_acc TIGR00119;
tigrfam_desc acetolactate synthase, small subunit;
tigrfam_mainrole Amino acid biosynthesis;
tigrfam_name acolac_sm;
tigrfam_sub1role Pyruvate family;
tigrfam_target db:TIGRFAMs.hmm|TIGR00119 evalue:2.6e-33 score:114.4 best_domain_score:114.2 name:TIGR00119;
398 637 CDS
ID metaerg.pl|14466
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__UBA3069;s__UBA3069 sp002366795;
genomedb_acc GCA_002366795.1;
genomedb_target db:genomedb|GCA_002366795.1|DFBX01000057.1_6 3 79 evalue:1.5e-13 qcov:97.50 identity:59.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.781306; 6.95986; ; 0.902337; 8.6435;
1641 949 CDS
ID metaerg.pl|14467
allgo_ids GO:0004222; GO:0006508;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_071480517.1 1 229 evalue:4.8e-113 qcov:99.60 identity:88.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.781306; 6.95986; ; 0.902337; 8.6435;
pfam_acc PF01435; PF06114;
pfam_desc Peptidase family M48; IrrE N-terminal-like domain;
pfam_id Peptidase_M48; Peptidase_M78;
pfam_target db:Pfam-A.hmm|PF01435.18 evalue:9e-25 score:86.8 best_domain_score:86.5 name:Peptidase_M48; db:Pfam-A.hmm|PF06114.13 evalue:5.8e-05 score:22.3 best_domain_score:19.4 name:Peptidase_M78;
tm_num 2;
1641 949 transmembrane_helix
ID metaerg.pl|14468
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.781306; 6.95986; ; 0.902337; 8.6435;
topology o958-1017i1345-1413o;
>Feature NODE_99256_length_1811_cov_61.4208
3 935 CDS
ID metaerg.pl|14469
allec_ids 2.6.1.13;
allgo_ids GO:0008483; GO:0030170; GO:0005737; GO:0004587; GO:0055129;
allko_ids K00821; K00818; K05830; K00819;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052665020.1 1 309 evalue:7.6e-122 qcov:99.70 identity:75.40;
kegg_pathway_id 00220; 00330; 00300;
kegg_pathway_name Urea cycle and metabolism of amino groups; Arginine and proline metabolism; Lysine biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.61589; 85.4232; 0.603853; 94.4226; 1.77965;
metacyc_pathway_id ARGININE-SYN4-PWY; CITRULBIO-PWY; ARG-PRO-PWY; PWY-3341; PWY-5004; ARGORNPROST-PWY; PWY-4981;
metacyc_pathway_name L-ornithine biosynthesis II;; L-citrulline biosynthesis;; L-arginine degradation VI (arginase 2 pathway);; L-proline biosynthesis III;; superpathway of L-citrulline metabolism;; L-arginine degradation (Stickland reaction);; L-proline biosynthesis II (from arginine);;
metacyc_pathway_type L-Ornithine-Biosynthesis;; Citrulline-Biosynthesis;; ARGININE-DEG; PROLINE-SYN;; PROLINE-SYN;; Citrulline-Biosynthesis; Super-Pathways;; ARGININE-DEG; Super-Pathways;; PROLINE-SYN;;
pfam_acc PF00202;
pfam_desc Aminotransferase class-III;
pfam_id Aminotran_3;
pfam_target db:Pfam-A.hmm|PF00202.21 evalue:4.3e-89 score:298.2 best_domain_score:297.9 name:Aminotran_3;
sprot_desc Ornithine aminotransferase;
sprot_id sp|Q8EP32|OAT_OCEIH;
sprot_target db:uniprot_sprot|sp|Q8EP32|OAT_OCEIH 1 295 evalue:8.8e-93 qcov:95.20 identity:56.60;
1497 1811 bac_16SrRNA
ID metaerg.pl|14470
Name bac_16SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.61589; 85.4232; 0.603853; 94.4226; 1.77965;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KF964613.1.1484 5 315 evalue:1.38e-133 qcov:99 identity:94.286;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;
>Feature NODE_100199_length_1798_cov_17.8342
1 1797 bac_23SrRNA
ID metaerg.pl|14471
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.354369; 8.95388; 0.945388; 7.26396; 0.39017;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LFIK01006839.6481.9125 1 1797 evalue:0.0 qcov:100 identity:88.747;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;
1797 1573 CDS
ID metaerg.pl|14472
genomedb_OC d__Bacteria;p__Patescibacteria;c__Gracilibacteria;o__BD1-5;f__UBA6164;g__UBA5194;s__UBA5194 sp002412935;
genomedb_acc GCA_002412935.1;
genomedb_target db:genomedb|GCA_002412935.1|DHWA01000013.1_126 1 72 evalue:5.3e-21 qcov:97.30 identity:70.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.354369; 8.95388; 0.945388; 7.26396; 0.39017;
>Feature NODE_100414_length_1795_cov_6.23966
1623 1183 CDS
ID metaerg.pl|14473
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 9.78845; ; 9.78845; ;
>Feature NODE_100538_length_1793_cov_8.58746
217 2 CDS
ID metaerg.pl|14474
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.804017; 20.9051; 9.56239; 1.02009; 32.2915;
684 1652 CDS
ID metaerg.pl|14475
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.804017; 20.9051; 9.56239; 1.02009; 32.2915;
>Feature NODE_102145_length_1770_cov_12.0857
617 144 CDS
ID metaerg.pl|14476
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 14.6136; ; 14.6136; ;
>Feature NODE_102484_length_1766_cov_4.72297
876 1 euk_28SrRNA
ID metaerg.pl|14477
Name euk_28SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 7.19988; ; 7.19988; ; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AZNG01000057.4678.8336 1 876 evalue:0.0 qcov:100 identity:98.516;
rRNA_taxon Eukaryota;Opisthokonta;Nucletmycea;Fungi;Dikarya;Ascomycota;
1192 1040 euk_5_8SrRNA
ID metaerg.pl|14478
Name euk_5_8SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 7.19988; ; 7.19988; ; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AIDY01000022.1960.5646 1 153 evalue:2.94e-75 qcov:100 identity:100.000;
rRNA_taxon Eukaryota;Opisthokonta;Nucletmycea;Fungi;Dikarya;Ascomycota;Pezizomycotina;
1766 1387 euk_18SrRNA
ID metaerg.pl|14479
Name euk_18SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 7.19988; ; 7.19988; ; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|U05201.1.1780 8 380 evalue:0.0 qcov:98 identity:98.930;
rRNA_taxon Eukaryota;Opisthokonta;Nucletmycea;Fungi;Dikarya;Ascomycota;
>Feature NODE_103063_length_1757_cov_37.3425
563 1 bac_23SrRNA
ID metaerg.pl|14480
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.298693; 37.804; 0.189172; 35.5538; 1.76291;
rRNA_target rRNA_target=db:silva_LSURef.fasta|BATB01000114.2465.5367 1 562 evalue:8.44e-166 qcov:99 identity:85.790;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;
854 462 CDS
ID metaerg.pl|14481
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.298693; 37.804; 0.189172; 35.5538; 1.76291;
1082 1006 tRNA
ID metaerg.pl|14482
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.298693; 37.804; 0.189172; 35.5538; 1.76291;
name tRNA_Ile_gat;
1337 1262 tRNA
ID metaerg.pl|14483
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.298693; 37.804; 0.189172; 35.5538; 1.76291;
name tRNA_Ala_tgc;
1540 1465 tRNA
ID metaerg.pl|14484
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.298693; 37.804; 0.189172; 35.5538; 1.76291;
name tRNA_Ala_cgc;
>Feature NODE_103810_length_1747_cov_6.68085
1343 2 bac_23SrRNA
ID metaerg.pl|14485
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; 0.171572; 9.90232; ; 10.0739;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FXAW01000024.457.2632 1 1342 evalue:0.0 qcov:100 identity:93.373;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;
>Feature NODE_104625_length_1736_cov_9.3599
763 3 bac_23SrRNA
ID metaerg.pl|14486
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 9.31967; 0.0252207; 8.83985; 0.15889; 0.295712;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AACY020017460.1.2216 1 761 evalue:0.0 qcov:100 identity:97.898;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Opitutales;Puniceicoccaceae;Coraliomargarita;
1025 949 tRNA
ID metaerg.pl|14487
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 9.31967; 0.0252207; 8.83985; 0.15889; 0.295712;
name tRNA_Ile_gat;
1224 1149 tRNA
ID metaerg.pl|14488
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 9.31967; 0.0252207; 8.83985; 0.15889; 0.295712;
name tRNA_Ala_tgc;
1736 1493 bac_16SrRNA
ID metaerg.pl|14489
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 9.31967; 0.0252207; 8.83985; 0.15889; 0.295712;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ545493.1.1548 14 244 evalue:1.80e-106 qcov:95 identity:96.970;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Opitutales;Puniceicoccaceae;
>Feature NODE_104774_length_1734_cov_26.8517
1210 1 bac_23SrRNA
ID metaerg.pl|14490
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.556818; 29.2367; 1.06124; 31.8497; 0.99495;
rRNA_target rRNA_target=db:silva_LSURef.fasta|BBRF01000004.2375.5473 1 1209 evalue:0.0 qcov:99 identity:95.376;
rRNA_taxon Bacteria;Actinobacteria;Actinobacteria;Micrococcales;Demequinaceae;
>Feature NODE_104868_length_1733_cov_49.1603
1002 2 bac_16SrRNA
ID metaerg.pl|14491
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 40.2622; 20.391; 22.3437; 116.183; 33.1857;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KF097507.1.1382 1 976 evalue:0.0 qcov:98 identity:97.134;
rRNA_taxon Bacteria;Gemmatimonadetes;BD2-11 terrestrial group;
1399 1325 tRNA
ID metaerg.pl|14492
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 40.2622; 20.391; 22.3437; 116.183; 33.1857;
name tRNA_His_gtg;
1634 1561 tRNA
ID metaerg.pl|14493
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 40.2622; 20.391; 22.3437; 116.183; 33.1857;
name tRNA_Arg_tct;
1726 1653 tRNA
ID metaerg.pl|14494
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 40.2622; 20.391; 22.3437; 116.183; 33.1857;
name tRNA_Pro_tgg;
>Feature NODE_105178_length_1729_cov_33.9146
1573 119 bac_16SrRNA
ID metaerg.pl|14495
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 92.9088; 6.58455; 34.8271; 44.7707; 6.72641;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JQ801042.1.1425 35 1451 evalue:0.0 qcov:97 identity:96.897;
rRNA_taxon Bacteria;Patescibacteria;Parcubacteria;Candidatus Kaiserbacteria;
>Feature NODE_105506_length_1725_cov_36.9132
257 3 CDS
ID metaerg.pl|14496
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 57.673; 2.53714; 12.4349; 39.7581; 2.94286;
831 337 CDS
ID metaerg.pl|14497
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__TANB77;f__CAG-508;g__CAG-273;s__CAG-273 sp000435755;
genomedb_acc GCA_000435755.1;
genomedb_target db:genomedb|GCA_000435755.1|CDC31307.1 1 160 evalue:3.2e-10 qcov:97.60 identity:30.90;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 57.673; 2.53714; 12.4349; 39.7581; 2.94286;
395 1724 bac_23SrRNA
ID metaerg.pl|14498
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 57.673; 2.53714; 12.4349; 39.7581; 2.94286;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FOZP01000008.2564.5449 1 1330 evalue:0.0 qcov:100 identity:89.505;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;
>Feature NODE_106036_length_1718_cov_59.1666
129 244 bac_5SrRNA
ID metaerg.pl|14499
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 87.5491; ; 0.186862; 87.736;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
417 1718 CDS
ID metaerg.pl|14500
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089090722.1 1 434 evalue:3.4e-229 qcov:100.00 identity:94.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 87.5491; ; 0.186862; 87.736;
>Feature NODE_106409_length_1713_cov_7.54222
218 3 CDS
ID metaerg.pl|14501
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.9591; ; 13.9591; ;
tm_num 1;
218 3 transmembrane_helix
ID metaerg.pl|14502
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.9591; ; 13.9591; ;
topology o45-113i;
1158 880 CDS
ID metaerg.pl|14503
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 13.9591; ; 13.9591; ;
>Feature NODE_106620_length_1710_cov_72.2876
888 1710 bac_16SrRNA
ID metaerg.pl|14504
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.0487179; 201.53; 0.116667; 194.79; 6.575;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|AB294176.1.1526 16 823 evalue:0.0 qcov:98 identity:99.505;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Alkalibacterium;
>Feature NODE_107976_length_1693_cov_10.3376
203 1303 CDS
ID metaerg.pl|14505
allko_ids K01120;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Salisediminibacterium;s__Salisediminibacterium haloalkalitolerans;
genomedb_acc GCF_900111285.1;
genomedb_target db:genomedb|GCF_900111285.1|WP_093075074.1 1 366 evalue:2.3e-162 qcov:100.00 identity:78.10;
kegg_pathway_id 00230;
kegg_pathway_name Purine metabolism;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 24.2178; ; 10.5392; 13.4887; 0.18989;
pfam_acc PF01966; PF13487;
pfam_desc HD domain; HD domain;
pfam_id HD; HD_5;
pfam_target db:Pfam-A.hmm|PF01966.22 evalue:7.8e-07 score:28.6 best_domain_score:27.6 name:HD; db:Pfam-A.hmm|PF13487.6 evalue:8e-14 score:50.9 best_domain_score:49.1 name:HD_5;
>Feature NODE_108513_length_1686_cov_6.34887
443 159 CDS
ID metaerg.pl|14506
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 11.3294; ; 11.3294; ;
997 1338 CDS
ID metaerg.pl|14507
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 11.3294; ; 11.3294; ;
1377 1574 CDS
ID metaerg.pl|14508
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 11.3294; ; 11.3294; ;
tm_num 1;
1377 1574 transmembrane_helix
ID metaerg.pl|14509
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 11.3294; ; 11.3294; ;
topology i1434-1502o;
>Feature NODE_110792_length_1657_cov_14.4345
1 374 euk_18SrRNA
ID metaerg.pl|14510
Name euk_18SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.45853; 63.6815; 2.35169; 20.5561; 39.3152;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KM020018.1.1773 1 367 evalue:4.44e-159 qcov:98 identity:94.550;
rRNA_taxon Eukaryota;Archaeplastida;Chloroplastida;Chlorophyta;
691 843 euk_5_8SrRNA
ID metaerg.pl|14511
Name euk_5_8SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.45853; 63.6815; 2.35169; 20.5561; 39.3152;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LBFL01008604.2.2846 1 118 evalue:3.97e-44 qcov:77 identity:94.068;
rRNA_taxon Eukaryota;Opisthokonta;Nucletmycea;Fungi;
1471 1055 CDS
ID metaerg.pl|14512
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.45853; 63.6815; 2.35169; 20.5561; 39.3152;
1207 1628 euk_28SrRNA
ID metaerg.pl|14513
Name euk_28SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.45853; 63.6815; 2.35169; 20.5561; 39.3152;
rRNA_target rRNA_target=db:silva_LSURef.fasta|EU410621.1.3349 1 421 evalue:6.41e-146 qcov:99 identity:89.100;
rRNA_taxon Eukaryota;Archaeplastida;
>Feature NODE_110998_length_1655_cov_6.29188
1248 1655 CDS
ID metaerg.pl|14514
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 11.2485; ; 11.2485; ;
>Feature NODE_111472_length_1649_cov_12.5841
260 1648 bac_23SrRNA
ID metaerg.pl|14515
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0740494; 17.2248; 0.117412; 0.131421; 16.9026;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ANNU01000014.481.3365 10 1389 evalue:0.0 qcov:99 identity:93.791;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;
>Feature NODE_111676_length_1647_cov_12.5126
1224 1 bac_23SrRNA
ID metaerg.pl|14516
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0193721; 17.336; 9.9853; ; 27.3407;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ATXP01000006.2151.5249 1 1224 evalue:0.0 qcov:100 identity:93.388;
rRNA_taxon Bacteria;Actinobacteria;Actinobacteria;Micrococcales;
623 1078 CDS
ID metaerg.pl|14517
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0193721; 17.336; 9.9853; ; 27.3407;
>Feature NODE_113175_length_1629_cov_11.1887
261 1 CDS
ID metaerg.pl|14518
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Rahnella;s__Rahnella sp003263515;
genomedb_acc GCA_003263515.1;
genomedb_target db:genomedb|GCA_003263515.1|JYDE01000035.1_1 17 87 evalue:1.7e-23 qcov:81.60 identity:78.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 21.4124; 1.5808; 17.5064; 2.3259;
323 399 tRNA
ID metaerg.pl|14519
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 21.4124; 1.5808; 17.5064; 2.3259;
name tRNA_Ile_gat;
681 756 tRNA
ID metaerg.pl|14520
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 21.4124; 1.5808; 17.5064; 2.3259;
name tRNA_Ala_tgc;
1026 1629 bac_23SrRNA
ID metaerg.pl|14521
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 21.4124; 1.5808; 17.5064; 2.3259;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP003380.2416234.2419146 1 604 evalue:0.0 qcov:100 identity:94.215;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Nitrosococcales;
>Feature NODE_113366_length_1627_cov_4.48601
1 183 CDS
ID metaerg.pl|14522
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.114421; 6.86256; 0.915369; 12.6175; 4.72512;
174 1626 bac_23SrRNA
ID metaerg.pl|14523
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.114421; 6.86256; 0.915369; 12.6175; 4.72512;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LFCJ01012606.2205.5269 1 1453 evalue:0.0 qcov:100 identity:88.203;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;
>Feature NODE_113567_length_1624_cov_65.508
1 311 bac_23SrRNA
ID metaerg.pl|14524
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.65672; 88.0984; 1.98847; 1.15536; 83.2985;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FNEK01000143.2651.5481 1 311 evalue:2.11e-154 qcov:100 identity:98.392;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Pseudoruegeria;
447 558 bac_5SrRNA
ID metaerg.pl|14525
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.65672; 88.0984; 1.98847; 1.15536; 83.2985;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
617 693 tRNA
ID metaerg.pl|14526
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.65672; 88.0984; 1.98847; 1.15536; 83.2985;
name tRNA_Met_cat;
737 982 CDS
ID metaerg.pl|14527
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.65672; 88.0984; 1.98847; 1.15536; 83.2985;
998 1321 CDS
ID metaerg.pl|14528
allgo_ids GO:0003677; GO:0004803; GO:0006313;
allko_ids K07483;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Defluviimonas;s__Defluviimonas sp002440625;
genomedb_acc GCA_002440625.1;
genomedb_target db:genomedb|GCA_002440625.1|DJUV01000332.1_17 1 107 evalue:7.3e-48 qcov:100.00 identity:93.50;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.65672; 88.0984; 1.98847; 1.15536; 83.2985;
pfam_acc PF01527;
pfam_desc Transposase;
pfam_id HTH_Tnp_1;
pfam_target db:Pfam-A.hmm|PF01527.20 evalue:1.1e-10 score:40.9 best_domain_score:39.1 name:HTH_Tnp_1;
sprot_desc Insertion element IS629 uncharacterized 12 kDa protein S4062;
sprot_id sp|P0A1V2|YIS3_SHIFL;
sprot_target db:uniprot_sprot|sp|P0A1V2|YIS3_SHIFL 1 104 evalue:5.7e-23 qcov:97.20 identity:55.20;
1321 1623 CDS
ID metaerg.pl|14529
allgo_ids GO:0003677; GO:0015074; GO:0006310; GO:0032196;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius mucosus_A;
genomedb_acc GCF_002080415.1;
genomedb_target db:genomedb|GCF_002080415.1|WP_087148881.1 1 101 evalue:1.3e-49 qcov:100.00 identity:95.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.65672; 88.0984; 1.98847; 1.15536; 83.2985;
pfam_acc PF13276;
pfam_desc HTH-like domain;
pfam_id HTH_21;
pfam_target db:Pfam-A.hmm|PF13276.6 evalue:8.4e-18 score:63.5 best_domain_score:63.0 name:HTH_21;
sprot_desc Transposase for insertion sequence element IS629;
sprot_id sp|P16942|T629_SHISO;
sprot_target db:uniprot_sprot|sp|P16942|T629_SHISO 1 101 evalue:1.3e-24 qcov:100.00 identity:54.50;
>Feature NODE_115176_length_1606_cov_15.6615
1 183 CDS
ID metaerg.pl|14530
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.201923; 15.1016; 0.503434; ; 14.3963;
1337 603 CDS
ID metaerg.pl|14531
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_071468180.1 1 244 evalue:1.2e-98 qcov:100.00 identity:71.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.201923; 15.1016; 0.503434; ; 14.3963;
pfam_acc PF06904;
pfam_desc Extensin-like protein C-terminus;
pfam_id Extensin-like_C;
pfam_target db:Pfam-A.hmm|PF06904.12 evalue:3.6e-52 score:176.2 best_domain_score:175.8 name:Extensin-like_C;
sp YES;
603 656 lipoprotein_signal_peptide
ID metaerg.pl|14532
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.201923; 15.1016; 0.503434; ; 14.3963;
1605 1348 CDS
ID metaerg.pl|14533
allec_ids 1.3.1.12;
allgo_ids GO:0004665; GO:0006571; GO:0008977; GO:0055114;
allko_ids K04517;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaca;s__Rhodobaca barguzinensis;
genomedb_acc GCF_001870665.2;
genomedb_target db:genomedb|GCF_001870665.2|WP_084634740.1 1 85 evalue:1.3e-39 qcov:100.00 identity:95.30;
kegg_pathway_id 00401; 00400;
kegg_pathway_name Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.201923; 15.1016; 0.503434; ; 14.3963;
metacyc_pathway_id ALL-CHORISMATE-PWY; COMPLETE-ARO-PWY; TYRSYN;
metacyc_pathway_name superpathway of chorismate metabolism;; superpathway of aromatic amino acid biosynthesis;; L-tyrosine biosynthesis I;;
metacyc_pathway_type Super-Pathways;; Amino-Acid-Biosynthesis; Super-Pathways;; TYROSINE-SYN;;
pfam_acc PF02153;
pfam_desc Prephenate dehydrogenase;
pfam_id PDH;
pfam_target db:Pfam-A.hmm|PF02153.17 evalue:7.2e-14 score:50.6 best_domain_score:50.3 name:PDH;
sprot_desc Prephenate dehydrogenase;
sprot_id sp|Q49XG5|TYRA_STAS1;
sprot_target db:uniprot_sprot|sp|Q49XG5|TYRA_STAS1 2 65 evalue:1.7e-06 qcov:75.30 identity:35.90;
>Feature NODE_115795_length_1600_cov_4.00777
464 673 CDS
ID metaerg.pl|14534
allgo_ids GO:0003676; GO:0005737; GO:0003677;
allko_ids K03704;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__BD2-11;s__BD2-11 sp002238605;
genomedb_acc GCA_002238605.1;
genomedb_target db:genomedb|GCA_002238605.1|MPMR01000007.1_26 1 68 evalue:2.7e-27 qcov:98.60 identity:82.40;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 6.06828; ; ; 6.06828; ;
pfam_acc PF00313;
pfam_desc 'Cold-shock' DNA-binding domain;
pfam_id CSD;
pfam_target db:Pfam-A.hmm|PF00313.22 evalue:2.4e-30 score:103.4 best_domain_score:103.3 name:CSD;
sprot_desc Cold shock-like protein CspG;
sprot_id sp|P0A980|CSPG_ECO57;
sprot_target db:uniprot_sprot|sp|P0A980|CSPG_ECO57 2 66 evalue:6.5e-20 qcov:94.20 identity:64.60;
893 967 tRNA
ID metaerg.pl|14535
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 6.06828; ; ; 6.06828; ;
name tRNA_Arg_tct;
1149 1223 tRNA
ID metaerg.pl|14536
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 6.06828; ; ; 6.06828; ;
name tRNA_His_gtg;
>Feature NODE_116278_length_1594_cov_27.848
897 4 bac_23SrRNA
ID metaerg.pl|14537
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.334488; 0.657895; 24.4515; 0.354571; 25.7985;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP011929.3748229.3751139 1 894 evalue:0.0 qcov:100 identity:94.643;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;
1232 1157 tRNA
ID metaerg.pl|14538
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.334488; 0.657895; 24.4515; 0.354571; 25.7985;
name tRNA_Ala_tgc;
1442 1366 tRNA
ID metaerg.pl|14539
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.334488; 0.657895; 24.4515; 0.354571; 25.7985;
name tRNA_Ile_gat;
>Feature NODE_118510_length_1570_cov_6.25875
689 3 CDS
ID metaerg.pl|14540
allgo_ids GO:0016627; GO:0055114;
allko_ids K00249;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__HLUCCA01;g__UBA11400;s__UBA11400 sp003448835;
genomedb_acc GCA_003448835.1;
genomedb_target db:genomedb|GCA_003448835.1|HAC15119.1 16 227 evalue:2.2e-81 qcov:92.60 identity:66.00;
kegg_pathway_id 00410; 00071; 00640; 00280;
kegg_pathway_name beta-Alanine metabolism; Fatty acid metabolism; Propanoate metabolism; Valine, leucine and isoleucine degradation;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 32.6085; 4.70704; 8.42253; 14.4824; 4.99648;
pfam_acc PF02770; PF02771;
pfam_desc Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain;
pfam_id Acyl-CoA_dh_M; Acyl-CoA_dh_N;
pfam_target db:Pfam-A.hmm|PF02770.19 evalue:1e-13 score:50.5 best_domain_score:49.8 name:Acyl-CoA_dh_M; db:Pfam-A.hmm|PF02771.16 evalue:2.1e-07 score:30.8 best_domain_score:30.3 name:Acyl-CoA_dh_N;
974 872 bac_5SrRNA
ID metaerg.pl|14541
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 32.6085; 4.70704; 8.42253; 14.4824; 4.99648;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
1570 1179 bac_23SrRNA
ID metaerg.pl|14542
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 32.6085; 4.70704; 8.42253; 14.4824; 4.99648;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AACY020521855.246.3139 2 392 evalue:4.58e-147 qcov:99 identity:90.793;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Balneolales;
>Feature NODE_119462_length_1560_cov_41.3801
1 75 tRNA
ID metaerg.pl|14543
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.104255; 41.8539; 0.860284; 37.1965; 3.69291;
name tRNA_Ile_gat;
102 177 tRNA
ID metaerg.pl|14544
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.104255; 41.8539; 0.860284; 37.1965; 3.69291;
name tRNA_Ala_tgc;
474 1560 bac_23SrRNA
ID metaerg.pl|14545
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.104255; 41.8539; 0.860284; 37.1965; 3.69291;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LM997413.2019755.2022642 2 1087 evalue:0.0 qcov:99 identity:97.053;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas;
777 1037 CDS
ID metaerg.pl|14546
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.104255; 41.8539; 0.860284; 37.1965; 3.69291;
>Feature NODE_121837_length_1534_cov_156.974
900 1 bac_16SrRNA
ID metaerg.pl|14547
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 23.0007; 30.5491; 215.246; 17.5889; 286.385;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KM077019.1.1436 1 896 evalue:0.0 qcov:99 identity:95.657;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;
>Feature NODE_122685_length_1525_cov_74.7184
1525 1 bac_23SrRNA
ID metaerg.pl|14548
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 55.08; 132.073; 80.1811; 46.2953; 313.63;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AUZM01000153.1.2872 1 1525 evalue:0.0 qcov:100 identity:89.034;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;
394 125 CDS
ID metaerg.pl|14549
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Prochloraceae;g__Prochloron;s__Prochloron didemni;
genomedb_acc GCA_000252485.1;
genomedb_target db:genomedb|GCA_000252485.1|JH610583.1_8 1 71 evalue:6.1e-24 qcov:79.80 identity:84.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 55.08; 132.073; 80.1811; 46.2953; 313.63;
1038 802 CDS
ID metaerg.pl|14550
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Prochloraceae;g__Prochloron;s__Prochloron didemni;
genomedb_acc GCA_000252485.1;
genomedb_target db:genomedb|GCA_000252485.1|JH610583.1_9 5 78 evalue:4.1e-16 qcov:94.90 identity:68.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 55.08; 132.073; 80.1811; 46.2953; 313.63;
1350 1135 CDS
ID metaerg.pl|14551
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Synechococcales;f__Cyanobiaceae;g__Synechococcus_C;s__Synechococcus_C sp003210755;
genomedb_acc GCA_003210755.1;
genomedb_target db:genomedb|GCA_003210755.1|QCUL01000029.1_20 1 71 evalue:5.6e-12 qcov:100.00 identity:59.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 55.08; 132.073; 80.1811; 46.2953; 313.63;
>Feature NODE_123925_length_1512_cov_6.64036
1274 306 CDS
ID metaerg.pl|14552
allgo_ids GO:0016746;
allko_ids K13512; K13510;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052666295.1 38 285 evalue:3.2e-62 qcov:77.00 identity:55.00;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 6.14317; ; 0.0543319; 6.08884; ;
pfam_acc PF01553;
pfam_desc Acyltransferase;
pfam_id Acyltransferase;
pfam_target db:Pfam-A.hmm|PF01553.21 evalue:2.6e-27 score:94.3 best_domain_score:93.9 name:Acyltransferase;
1511 1408 bac_5SrRNA
ID metaerg.pl|14553
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 6.14317; ; 0.0543319; 6.08884; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_124769_length_1503_cov_16.0559
277 351 tRNA
ID metaerg.pl|14554
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.3222; 3.45307; 77.915; 136.685; 34.9956;
name tRNA_Ile_gat;
553 627 tRNA
ID metaerg.pl|14555
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.3222; 3.45307; 77.915; 136.685; 34.9956;
name tRNA_Ala_tgc;
1065 1503 bac_23SrRNA
ID metaerg.pl|14556
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.3222; 3.45307; 77.915; 136.685; 34.9956;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MDWE01000072.224.3233 13 439 evalue:6.78e-136 qcov:97 identity:87.269;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;
>Feature NODE_125549_length_1495_cov_160.515
788 258 CDS
ID metaerg.pl|14557
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 83.9264; 5.44461; 4.24015; 67.4937; 6.74796;
738 1495 bac_16SrRNA
ID metaerg.pl|14558
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 83.9264; 5.44461; 4.24015; 67.4937; 6.74796;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|MEHT01000048.404.1852 5 758 evalue:0.0 qcov:99 identity:97.878;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseinatronobacter;
>Feature NODE_126123_length_1490_cov_3.89199
1207 2 CDS
ID metaerg.pl|14559
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 6.9097; ; ; 6.9097;
pfam_acc PF14559;
pfam_desc Tetratricopeptide repeat;
pfam_id TPR_19;
pfam_target db:Pfam-A.hmm|PF14559.6 evalue:1.1e-05 score:25.1 best_domain_score:13.8 name:TPR_19;
1470 1362 bac_5SrRNA
ID metaerg.pl|14560
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 6.9097; ; ; 6.9097;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LK022848.9045273.9048314 5 104 evalue:2.71e-24 qcov:92 identity:87.000;
rRNA_taxon Bacteria;Actinobacteria;Actinobacteria;
>Feature NODE_128523_length_1466_cov_52.0971
5 92 bac_5SrRNA
ID metaerg.pl|14561
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 79.7257; ; ; 79.7257;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
522 1466 CDS
ID metaerg.pl|14562
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nostoc;s__Nostoc punctiforme;
genomedb_acc GCF_000020025.1;
genomedb_target db:genomedb|GCF_000020025.1|WP_012406995.1 1 315 evalue:3.7e-140 qcov:100.00 identity:78.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 79.7257; ; ; 79.7257;
pfam_acc PF14518;
pfam_desc Iron-containing redox enzyme;
pfam_id Haem_oxygenas_2;
pfam_target db:Pfam-A.hmm|PF14518.6 evalue:7.4e-24 score:83.7 best_domain_score:83.1 name:Haem_oxygenas_2;
>Feature NODE_128872_length_1463_cov_3.51349
214 1279 euk_28SrRNA
ID metaerg.pl|14563
Name euk_28SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 6.6687; ; 0.669459; 5.99924;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_129534_length_1456_cov_27.3226
522 1456 bac_16SrRNA
ID metaerg.pl|14564
Name bac_16SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 27.7565; ; ; 27.7565;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JX240774.1.1486 6 935 evalue:0.0 qcov:99 identity:93.891;
rRNA_taxon Bacteria;Gemmatimonadetes;Longimicrobia;Longimicrobiales;
974 1249 CDS
ID metaerg.pl|14565
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 27.7565; ; ; 27.7565;
>Feature NODE_129643_length_1455_cov_29.4036
1 499 bac_16SrRNA
ID metaerg.pl|14566
Name bac_16SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 26.0383; 25.0743; 17.4697; 32.5241; 101.107;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ152619.1.1516 1 486 evalue:0.0 qcov:97 identity:98.765;
rRNA_taxon Bacteria;Gemmatimonadetes;BD2-11 terrestrial group;
916 1455 bac_23SrRNA
ID metaerg.pl|14567
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 26.0383; 25.0743; 17.4697; 32.5241; 101.107;
rRNA_target rRNA_target=db:silva_LSURef.fasta|GU568020.16979.19937 12 540 evalue:8.31e-146 qcov:98 identity:84.673;
rRNA_taxon Bacteria;Gemmatimonadetes;
1455 946 CDS
ID metaerg.pl|14568
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 26.0383; 25.0743; 17.4697; 32.5241; 101.107;
>Feature NODE_130149_length_1451_cov_4.43553
1 1451 bac_23SrRNA
ID metaerg.pl|14569
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.38201; 35.1376; 10.4374; 13.3689; 7.94927;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
393 1 CDS
ID metaerg.pl|14570
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.38201; 35.1376; 10.4374; 13.3689; 7.94927;
tm_num 1;
393 1 transmembrane_helix
ID metaerg.pl|14571
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 3.38201; 35.1376; 10.4374; 13.3689; 7.94927;
topology i58-126o;
>Feature NODE_131362_length_1439_cov_158.835
2 1246 bac_23SrRNA
ID metaerg.pl|14572
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 287.898; 134.919; 137.034; 262.577; 822.427;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP012154.242765.245645 1 1245 evalue:0.0 qcov:100 identity:96.875;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Gammaproteobacteria Incertae Sedis;Unknown Family;
1228 1437 CDS
ID metaerg.pl|14573
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 287.898; 134.919; 137.034; 262.577; 822.427;
1322 1433 bac_5SrRNA
ID metaerg.pl|14574
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 287.898; 134.919; 137.034; 262.577; 822.427;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_132139_length_1432_cov_43.1924
610 1 bac_23SrRNA
ID metaerg.pl|14575
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 111.927; 6.78003; 6.30733; 91.8674; 6.97192;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 601 evalue:0.0 qcov:99 identity:87.294;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;
923 729 CDS
ID metaerg.pl|14576
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 111.927; 6.78003; 6.30733; 91.8674; 6.97192;
1432 951 bac_16SrRNA
ID metaerg.pl|14577
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 111.927; 6.78003; 6.30733; 91.8674; 6.97192;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JQ427592.1.1475 14 482 evalue:0.0 qcov:97 identity:98.298;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;Nitriliruptoraceae;Egicoccus;
>Feature NODE_133320_length_1421_cov_81.4758
2 1421 bac_23SrRNA
ID metaerg.pl|14578
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 5.08891; 279.333; 10.3257; 242.226; 21.6924;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JQMZ01000001.2345550.2348321 1 1420 evalue:0.0 qcov:100 identity:94.511;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Caulobacterales;
>Feature NODE_137059_length_1388_cov_5.47562
2 205 CDS
ID metaerg.pl|14579
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.47496; 7.76898; 0.47496; ; 6.81906;
536 1354 CDS
ID metaerg.pl|14580
allgo_ids GO:0016021; GO:0005886; GO:0030420;
allko_ids K02238;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_D;g__Bacillus_S;s__Bacillus_S marmarensis;
genomedb_acc GCF_000474275.2;
genomedb_target db:genomedb|GCF_000474275.2|WP_083477635.1 1 260 evalue:1.9e-68 qcov:95.60 identity:51.20;
kegg_pathway_id 03090;
kegg_pathway_name Type II secretion system;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.47496; 7.76898; 0.47496; ; 6.81906;
pfam_acc PF00753; PF12706;
pfam_desc Metallo-beta-lactamase superfamily; Beta-lactamase superfamily domain;
pfam_id Lactamase_B; Lactamase_B_2;
pfam_target db:Pfam-A.hmm|PF00753.27 evalue:1.3e-13 score:50.6 best_domain_score:49.7 name:Lactamase_B; db:Pfam-A.hmm|PF12706.7 evalue:5.3e-10 score:38.4 best_domain_score:37.6 name:Lactamase_B_2;
sprot_desc ComE operon protein 3;
sprot_id sp|P39695|COMEC_BACSU;
sprot_target db:uniprot_sprot|sp|P39695|COMEC_BACSU 4 229 evalue:3.1e-25 qcov:83.10 identity:30.40;
>Feature NODE_137704_length_1382_cov_45.6609
127 203 tRNA
ID metaerg.pl|14581
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 34.8141; 3.2987; 22.9537; 3.55601; 5.00568;
name tRNA_Ile_gat;
222 297 tRNA
ID metaerg.pl|14582
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 34.8141; 3.2987; 22.9537; 3.55601; 5.00568;
name tRNA_Ala_tgc;
528 1381 bac_23SrRNA
ID metaerg.pl|14583
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 34.8141; 3.2987; 22.9537; 3.55601; 5.00568;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FTPK01000002.677971.680860 1 854 evalue:0.0 qcov:100 identity:90.951;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Ectothiorhodospirales;
>Feature NODE_138285_length_1377_cov_48.4334
1 1377 bac_23SrRNA
ID metaerg.pl|14584
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.812551; 12.3928; ; 3.01059; 8.5705;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP002349.4143132.4146026 1 1377 evalue:0.0 qcov:100 identity:85.111;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;
1 306 CDS
ID metaerg.pl|14585
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.812551; 12.3928; ; 3.01059; 8.5705;
>Feature NODE_138720_length_1374_cov_4.55876
752 823 tRNA
ID metaerg.pl|14586
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 7.87745; ; 7.87745; ;
name tRNA_Val_gac;
1057 1374 bac_16SrRNA
ID metaerg.pl|14587
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 7.87745; ; 7.87745; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|GEUY01000018.384.1936 6 318 evalue:6.18e-162 qcov:98 identity:99.681;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Chloroplast;
>Feature NODE_139022_length_1371_cov_21.8609
1 672 CDS
ID metaerg.pl|14588
allec_ids 6.1.1.6;
allgo_ids GO:0000166; GO:0004812; GO:0005524; GO:0006418; GO:0005737; GO:0004824; GO:0000287; GO:0003676; GO:0006430;
allko_ids K04567;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus chagannorensis;
genomedb_acc GCF_000429725.1;
genomedb_target db:genomedb|GCF_000429725.1|WP_026698440.1 1 223 evalue:7.6e-116 qcov:100.00 identity:93.30;
kegg_pathway_id 00300; 00970;
kegg_pathway_name Lysine biosynthesis; Aminoacyl-tRNA biosynthesis;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 7.87797; ; 7.87797;
metacyc_pathway_id TRNA-CHARGING-PWY;
metacyc_pathway_name tRNA charging;;
metacyc_pathway_type Aminoacyl-tRNAs-Charging; Metabolic-Clusters;;
pfam_acc PF00152;
pfam_desc tRNA synthetases class II (D, K and N);
pfam_id tRNA-synt_2;
pfam_target db:Pfam-A.hmm|PF00152.20 evalue:3.1e-38 score:130.8 best_domain_score:130.6 name:tRNA-synt_2;
sprot_desc Lysine--tRNA ligase;
sprot_id sp|Q5WLU5|SYK_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WLU5|SYK_BACSK 2 219 evalue:1.2e-99 qcov:97.80 identity:81.30;
>Feature NODE_141210_length_1353_cov_74.5169
1 768 bac_16SrRNA
ID metaerg.pl|14589
Name bac_16SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 9.06567; 17.8313; 35.1122; 4.27016; 66.2793;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|AONB01000049.48.1571 1 756 evalue:0.0 qcov:98 identity:98.016;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Nitrincolaceae;Nitrincola;
801 571 CDS
ID metaerg.pl|14590
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E sp003290225;
genomedb_acc GCA_003290225.1;
genomedb_target db:genomedb|GCA_003290225.1|CP029983.1_62 10 76 evalue:2.4e-29 qcov:88.20 identity:97.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 9.06567; 17.8313; 35.1122; 4.27016; 66.2793;
870 946 tRNA
ID metaerg.pl|14591
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 9.06567; 17.8313; 35.1122; 4.27016; 66.2793;
name tRNA_Ile_gat;
1063 1138 tRNA
ID metaerg.pl|14592
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 9.06567; 17.8313; 35.1122; 4.27016; 66.2793;
name tRNA_Ala_tgc;
>Feature NODE_141827_length_1349_cov_3.27202
1129 1 bac_23SrRNA
ID metaerg.pl|14593
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.34195; 13.8515; 3.71476; 2.97665; 5.81818;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FWWT01000028.476.3414 1 1128 evalue:0.0 qcov:99 identity:87.709;
rRNA_taxon Bacteria;Firmicutes;Clostridia;
>Feature NODE_142059_length_1347_cov_3.11223
531 1346 bac_23SrRNA
ID metaerg.pl|14594
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 6.17126; ; ; 6.17126;
rRNA_target rRNA_target=db:silva_LSURef.fasta|HQ183569.1.2810 1 816 evalue:0.0 qcov:100 identity:97.433;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Chloroplast;
>Feature NODE_142625_length_1342_cov_4.64957
292 407 bac_5SrRNA
ID metaerg.pl|14595
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 14.2911; 40.8121; 8.13255; 12.8431; 76.0789;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
1342 632 CDS
ID metaerg.pl|14596
allgo_ids GO:0004325; GO:0006783;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_073608148.1 1 236 evalue:3.9e-102 qcov:100.00 identity:75.70;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 14.2911; 40.8121; 8.13255; 12.8431; 76.0789;
pfam_acc PF00762;
pfam_desc Ferrochelatase;
pfam_id Ferrochelatase;
pfam_target db:Pfam-A.hmm|PF00762.19 evalue:2.3e-31 score:108.3 best_domain_score:108.1 name:Ferrochelatase;
>Feature NODE_142968_length_1339_cov_14.8123
925 2 CDS
ID metaerg.pl|14597
allec_ids 1.1.1.205;
allgo_ids GO:0003824; GO:0055114; GO:0003938; GO:0046872; GO:0000166; GO:0006177;
allko_ids K00641; K05847; K00088; K00970; K00974; K02806; K01697; K00364; K02000;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Salisediminibacteriaceae;g__Alkalicoccus;s__Alkalicoccus chagannorensis;
genomedb_acc GCF_000429725.1;
genomedb_target db:genomedb|GCF_000429725.1|WP_026698540.1 1 308 evalue:2.8e-161 qcov:100.00 identity:95.50;
kegg_pathway_id 00450; 02060; 02010; 00271; 00920; 00983; 00260; 00230;
kegg_pathway_name Selenoamino acid metabolism; Phosphotransferase system (PTS); ABC transporters - General; Methionine metabolism; Sulfur metabolism; Drug metabolism - other enzymes; Glycine, serine and threonine metabolism; Purine metabolism;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 14.7384; 0.761144; 0.12111; 15.6207; ;
metacyc_pathway_id PWY-6125; URSIN-PWY; DENOVOPURINE2-PWY; PWY-6353; PWY-841; PRPP-PWY; PWY-5695; PWY-5044; P121-PWY;
metacyc_pathway_name superpathway of guanosine nucleotides de novo biosynthesis II;; ureide biosynthesis;; superpathway of purine nucleotides de novo biosynthesis II;; purine nucleotides degradation II (aerobic);; superpathway of purine nucleotides de novo biosynthesis I;; superpathway of histidine, purine, and pyrimidine biosynthesis;; inosine 5'-phosphate degradation;; purine nucleotides degradation I (plants);; adenine and adenosine salvage I;;
metacyc_pathway_type Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Polyamine-Biosynthesis; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Purine-Degradation; Super-Pathways;; Purine-Nucleotide-De-Novo-Biosynthesis; Super-Pathways;; Super-Pathways;; Purine-Degradation;; Purine-Degradation; Super-Pathways;; Adenine-Adenosine-Salvage;;
pfam_acc PF00571; PF00478;
pfam_desc CBS domain; IMP dehydrogenase / GMP reductase domain;
pfam_id CBS; IMPDH;
pfam_target db:Pfam-A.hmm|PF00571.28 evalue:2e-19 score:69.0 best_domain_score:38.4 name:CBS; db:Pfam-A.hmm|PF00478.25 evalue:7.4e-81 score:271.0 best_domain_score:270.9 name:IMPDH;
sprot_desc Inosine-5'-monophosphate dehydrogenase;
sprot_id sp|Q9KGN8|IMDH_BACHD;
sprot_target db:uniprot_sprot|sp|Q9KGN8|IMDH_BACHD 1 308 evalue:2.2e-136 qcov:100.00 identity:77.60;
1337 942 CDS
ID metaerg.pl|14598
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 14.7384; 0.761144; 0.12111; 15.6207; ;
tm_num 1;
1337 942 transmembrane_helix
ID metaerg.pl|14599
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 14.7384; 0.761144; 0.12111; 15.6207; ;
topology i1272-1331o;
1272 1161 bac_5SrRNA
ID metaerg.pl|14600
Name bac_5SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 14.7384; 0.761144; 0.12111; 15.6207; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_144089_length_1330_cov_7.94275
1 323 bac_23SrRNA
ID metaerg.pl|14601
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.170339; 12.2195; 0.0813559; 0.0601695; 12.5314;
rRNA_target rRNA_target=db:silva_LSURef.fasta|BBRF01000004.2375.5473 1 323 evalue:4.87e-136 qcov:100 identity:93.846;
rRNA_taxon Bacteria;Actinobacteria;Actinobacteria;Micrococcales;
408 515 bac_5SrRNA
ID metaerg.pl|14602
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.170339; 12.2195; 0.0813559; 0.0601695; 12.5314;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
632 1330 CDS
ID metaerg.pl|14603
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.170339; 12.2195; 0.0813559; 0.0601695; 12.5314;
>Feature NODE_144202_length_1329_cov_60.2331
1071 1 bac_16SrRNA
ID metaerg.pl|14608
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 29.9958; 124.157; 22.4427; 51.1298; 20.5886;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KC852995.1.1434 1 1067 evalue:0.0 qcov:99 identity:96.632;
rRNA_taxon Bacteria;Actinobacteria;Acidimicrobiia;Microtrichales;Ilumatobacteraceae;
>Feature NODE_144205_length_1329_cov_35.471
79 3 tRNA
ID metaerg.pl|14604
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 6.22646; 11.631; 87.4148; 4.56489; 109.837;
name tRNA_Met_cat;
308 196 bac_5SrRNA
ID metaerg.pl|14605
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 6.22646; 11.631; 87.4148; 4.56489; 109.837;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
1329 388 bac_23SrRNA
ID metaerg.pl|14606
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 6.22646; 11.631; 87.4148; 4.56489; 109.837;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FNIY01000022.2750.5685 1 942 evalue:0.0 qcov:100 identity:96.391;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;
519 977 CDS
ID metaerg.pl|14607
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Phyllobacterium;s__Phyllobacterium sp900473335;
genomedb_acc GCA_900473335.1;
genomedb_target db:genomedb|GCA_900473335.1|UCNP01000068.1_2 1 152 evalue:1.4e-76 qcov:100.00 identity:93.40;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 6.22646; 11.631; 87.4148; 4.56489; 109.837;
>Feature NODE_144914_length_1324_cov_3.42238
408 1317 euk_28SrRNA
ID metaerg.pl|14609
Name euk_28SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.25468; 0.373935; 0.248722; 7.87734; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_145467_length_1319_cov_92.5111
819 747 tRNA
ID metaerg.pl|14610
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 1288.2; 0.637297; ; 1287.56;
name tRNA_Trp_cca;
1090 1317 CDS
ID metaerg.pl|14611
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 1288.2; 0.637297; ; 1287.56;
>Feature NODE_146240_length_1313_cov_37.1932
843 3 bac_23SrRNA
ID metaerg.pl|14612
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 1.41273; 30.4987; 1.00774; 34.135; 1.21582;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 841 evalue:0.0 qcov:100 identity:95.006;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;Nitriliruptoraceae;
1208 666 CDS
ID metaerg.pl|14613
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 1.41273; 30.4987; 1.00774; 34.135; 1.21582;
>Feature NODE_146361_length_1312_cov_108.5
229 304 tRNA
ID metaerg.pl|14614
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 2.83046; 125.474; 9.89931; 106.673; 6.07143;
name tRNA_Ala_tgc;
449 525 tRNA
ID metaerg.pl|14615
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 2.83046; 125.474; 9.89931; 106.673; 6.07143;
name tRNA_Ile_gat;
573 1145 CDS
ID metaerg.pl|14616
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 2.83046; 125.474; 9.89931; 106.673; 6.07143;
>Feature NODE_146616_length_1310_cov_15.6996
543 1 bac_16SrRNA
ID metaerg.pl|14617
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 158.92; 375.633; 169.389; 27.4629; 19.8612;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|DQ432391.1.1513 1 540 evalue:0.0 qcov:99 identity:93.750;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;HOC36;
1 306 CDS
ID metaerg.pl|14618
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Prochloraceae;g__Prochloron;s__Prochloron didemni;
genomedb_acc GCA_000252485.1;
genomedb_target db:genomedb|GCA_000252485.1|JH610583.1_10 1 101 evalue:3.2e-29 qcov:100.00 identity:74.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 158.92; 375.633; 169.389; 27.4629; 19.8612;
tm_num 1;
1 306 transmembrane_helix
ID metaerg.pl|14619
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 158.92; 375.633; 169.389; 27.4629; 19.8612;
topology i226-294o;
1023 1310 CDS
ID metaerg.pl|14620
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 158.92; 375.633; 169.389; 27.4629; 19.8612;
sp YES;
1023 1106 signal_peptide
ID metaerg.pl|14621
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 158.92; 375.633; 169.389; 27.4629; 19.8612;
>Feature NODE_147661_length_1302_cov_8.79711
936 670 CDS
ID metaerg.pl|14622
allgo_ids GO:0003723; GO:0003735; GO:0005622; GO:0005840; GO:0006412; GO:0019843;
allko_ids K02968;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Marivivens;s__Marivivens niveibacter;
genomedb_acc GCF_002150005.2;
genomedb_target db:genomedb|GCF_002150005.2|WP_086451095.1 1 87 evalue:5.3e-28 qcov:98.90 identity:83.90;
kegg_pathway_id 03010;
kegg_pathway_name Ribosome;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0373264; 2.80035; 10.434; 0.297743; 13.5694;
pfam_acc PF01649;
pfam_desc Ribosomal protein S20;
pfam_id Ribosomal_S20p;
pfam_target db:Pfam-A.hmm|PF01649.18 evalue:2.7e-25 score:88.1 best_domain_score:87.9 name:Ribosomal_S20p;
sprot_desc 30S ribosomal protein S20;
sprot_id sp|A8LNL0|RS20_DINSH;
sprot_target db:uniprot_sprot|sp|A8LNL0|RS20_DINSH 1 88 evalue:4.4e-29 qcov:100.00 identity:79.50;
tigrfam_acc TIGR00029;
tigrfam_desc ribosomal protein bS20;
tigrfam_mainrole Protein synthesis;
tigrfam_name S20;
tigrfam_sub1role Ribosomal proteins synthesis and modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00029 evalue:1.5e-21 score:75.9 best_domain_score:75.7 name:TIGR00029;
1300 1082 CDS
ID metaerg.pl|14623
allec_ids 4.2.1.17;
allgo_ids GO:0003824; GO:0004300; GO:0006631;
allko_ids K01692;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseovarius;s__Roseovarius sp003298505;
genomedb_acc GCA_003298505.1;
genomedb_target db:genomedb|GCA_003298505.1|RBI71108.1 1 72 evalue:1.0e-24 qcov:100.00 identity:83.30;
kegg_pathway_id 00380; 00632; 00930; 00280; 00281; 00310; 00410; 00071; 00640; 00650; 00903;
kegg_pathway_name Tryptophan metabolism; Benzoate degradation via CoA ligation; Caprolactam degradation; Valine, leucine and isoleucine degradation; Geraniol degradation; Lysine degradation; beta-Alanine metabolism; Fatty acid metabolism; Propanoate metabolism; Butanoate metabolism; Limonene and pinene degradation;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0373264; 2.80035; 10.434; 0.297743; 13.5694;
metacyc_pathway_id PWY-5136; ILEUDEG-PWY; FAO-PWY; VALDEG-PWY; PWY-5138; P3-PWY; PWY-561; PWY-6435;
metacyc_pathway_name fatty acid β-oxidation II (peroxisome);; L-isoleucine degradation I;; fatty acid β-oxidation I;; L-valine degradation I;; unsaturated, even numbered fatty acid β-oxidation;; gallate degradation III (anaerobic);; superpathway of glyoxylate cycle and fatty acid degradation;; 4-hydroxybenzoate biosynthesis III (plants);;
metacyc_pathway_type Fatty-Acid-Degradation;; ISOLEUCINE-DEG;; Fatty-Acid-Degradation;; VALINE-DEG;; Fatty-Acid-Degradation;; GALLATE-DEG;; Energy-Metabolism; Super-Pathways;; 4-Hydroxybenzoate-Biosynthesis;;
pfam_acc PF00378;
pfam_desc Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:1.4e-13 score:50.0 best_domain_score:49.9 name:ECH_1;
sprot_desc Probable enoyl-CoA hydratase;
sprot_id sp|Q52995|ECHH_RHIME;
sprot_target db:uniprot_sprot|sp|Q52995|ECHH_RHIME 1 72 evalue:2.7e-16 qcov:100.00 identity:62.50;
>Feature NODE_147891_length_1300_cov_18.9004
1 445 euk_28SrRNA
ID metaerg.pl|14624
Name euk_28SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.3983; ; 21.3983; ; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LUKC01000108.473.3863 1 445 evalue:0.0 qcov:100 identity:100.000;
rRNA_taxon Eukaryota;Archaeplastida;Chloroplastida;Charophyta;Phragmoplastophyta;
1299 463 CDS
ID metaerg.pl|14625
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 21.3983; ; 21.3983; ; ;
>Feature NODE_149053_length_1291_cov_108.698
119 6 bac_5SrRNA
ID metaerg.pl|14626
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 29.9413; 139.911; 34.078; 60.7222; 15.17;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
1291 181 bac_23SrRNA
ID metaerg.pl|14627
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 29.9413; 139.911; 34.078; 60.7222; 15.17;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FUFK010831163.39.3094 1 1111 evalue:0.0 qcov:100 identity:92.639;
rRNA_taxon Bacteria;Actinobacteria;Acidimicrobiia;Microtrichales;
>Feature NODE_149587_length_1287_cov_24.8791
382 1286 bac_23SrRNA
ID metaerg.pl|14628
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.256816; 24.3984; 0.485488; 0.129288; 25.27;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FXAI01000013.78993.81856 3 905 evalue:0.0 qcov:99 identity:90.099;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Cellvibrionales;
>Feature NODE_150119_length_1283_cov_7.63029
657 1 CDS
ID metaerg.pl|14629
allgo_ids GO:0003677; GO:0006303; GO:0003690; GO:0006310;
allko_ids K10979;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Paracoccus;s__Paracoccus versutus;
genomedb_acc GCF_000763885.1;
genomedb_target db:genomedb|GCF_000763885.1|WP_036760859.1 2 219 evalue:5.3e-77 qcov:99.50 identity:66.10;
kegg_pathway_id 03450;
kegg_pathway_name Non-homologous end-joining;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.73522; ; ; 6.73522; ;
pfam_acc PF02735;
pfam_desc Ku70/Ku80 beta-barrel domain;
pfam_id Ku;
pfam_target db:Pfam-A.hmm|PF02735.16 evalue:4.4e-28 score:97.6 best_domain_score:97.3 name:Ku;
sprot_desc Non-homologous end joining protein Ku;
sprot_id sp|B9KKS1|KU_RHOSK;
sprot_target db:uniprot_sprot|sp|B9KKS1|KU_RHOSK 1 219 evalue:1.6e-72 qcov:100.00 identity:58.00;
tigrfam_acc TIGR02772;
tigrfam_desc Ku protein;
tigrfam_mainrole DNA metabolism;
tigrfam_name Ku_bact;
tigrfam_sub1role DNA replication, recombination, and repair;
tigrfam_target db:TIGRFAMs.hmm|TIGR02772 evalue:3.1e-72 score:242.4 best_domain_score:242.2 name:TIGR02772;
>Feature NODE_150096_length_1283_cov_88.4153
917 228 CDS
ID metaerg.pl|14630
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 8.4263; 77.6346; 12.8252; 110.109; 11.2233;
490 1283 bac_23SrRNA
ID metaerg.pl|14631
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 8.4263; 77.6346; 12.8252; 110.109; 11.2233;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 10 794 evalue:0.0 qcov:99 identity:88.398;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;
>Feature NODE_150733_length_1279_cov_3.28922
1201 8 euk_18SrRNA
ID metaerg.pl|14632
Name euk_18SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 6.00177; ; ; 6.00177;
rRNA_target RNA_target=db:silva_SSURef_Nr99.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_150922_length_1277_cov_17.2136
972 1 bac_16SrRNA
ID metaerg.pl|14633
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 24.0195; 60.4827; 148.301; 309.216; 76.4135;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|AF452599.1.1453 1 947 evalue:0.0 qcov:97 identity:96.944;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Chitinophagales;Saprospiraceae;
>Feature NODE_151372_length_1274_cov_5.98687
6 113 bac_5SrRNA
ID metaerg.pl|14634
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.965302; 4.9137; ; ; 5.879;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CXYX01000012.1.2987 1 108 evalue:2.07e-25 qcov:100 identity:86.111;
rRNA_taxon Bacteria;Firmicutes;Clostridia;
347 574 CDS
ID metaerg.pl|14635
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.965302; 4.9137; ; ; 5.879;
752 1273 CDS
ID metaerg.pl|14636
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Tissierellales;f__Tepidimicrobiaceae;g__Clostridium_V;s__Clostridium_V ultunense;
genomedb_acc GCF_000511955.1;
genomedb_target db:genomedb|GCF_000511955.1|WP_025641701.1 6 174 evalue:5.2e-35 qcov:97.10 identity:46.20;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.965302; 4.9137; ; ; 5.879;
sp YES;
tm_num 1;
752 826 signal_peptide
ID metaerg.pl|14637
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.965302; 4.9137; ; ; 5.879;
752 1273 transmembrane_helix
ID metaerg.pl|14638
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.965302; 4.9137; ; ; 5.879;
topology i770-829o;
>Feature NODE_151864_length_1270_cov_60.6963
1 666 bac_23SrRNA
ID metaerg.pl|14639
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 77.0446; 4.97589; 50.3902; 12.4804; 9.19821;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LOCO01000050.203.3084 1 666 evalue:0.0 qcov:100 identity:97.297;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Marinobacteraceae;Marinobacter;
518 84 CDS
ID metaerg.pl|14640
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Endozoicomonadaceae;g__Endozoicomonas;s__Endozoicomonas sp900299555;
genomedb_acc GCA_900299555.1;
genomedb_target db:genomedb|GCA_900299555.1|OODV01000021.1_1 1 144 evalue:9.4e-67 qcov:100.00 identity:89.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 77.0446; 4.97589; 50.3902; 12.4804; 9.19821;
822 935 bac_5SrRNA
ID metaerg.pl|14641
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 77.0446; 4.97589; 50.3902; 12.4804; 9.19821;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_152974_length_1262_cov_8.98177
3 599 CDS
ID metaerg.pl|14642
allec_ids 1.3.1.43;
allgo_ids GO:0004665; GO:0006571; GO:0008977; GO:0055114; GO:0047794; GO:0070403; GO:0042803;
allko_ids K00891; K03785; K00945; K01735; K00014; K00210; K13830; K00951; K00800; K04517; K00220;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter;s__Roseinatronobacter thiooxidans;
genomedb_acc GCF_001870675.1;
genomedb_target db:genomedb|GCF_001870675.1|WP_084386069.1 1 198 evalue:6.2e-101 qcov:100.00 identity:88.90;
kegg_pathway_id 00240; 00401; 00400; 00230;
kegg_pathway_name Pyrimidine metabolism; Novobiocin biosynthesis; Phenylalanine, tyrosine and tryptophan biosynthesis; Purine metabolism;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.19514; 11.0728; ; 1.17446; 13.4424;
metacyc_pathway_id PWY-6120;
metacyc_pathway_name L-tyrosine biosynthesis III;;
metacyc_pathway_type TYROSINE-SYN;;
pfam_acc PF02153;
pfam_desc Prephenate dehydrogenase;
pfam_id PDH;
pfam_target db:Pfam-A.hmm|PF02153.17 evalue:1.5e-49 score:167.6 best_domain_score:167.4 name:PDH;
sprot_desc Cyclohexadienyl dehydrogenase;
sprot_id sp|Q04983|TYRC_ZYMMO;
sprot_target db:uniprot_sprot|sp|Q04983|TYRC_ZYMMO 14 178 evalue:6.3e-36 qcov:83.30 identity:41.80;
1081 557 CDS
ID metaerg.pl|14643
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.19514; 11.0728; ; 1.17446; 13.4424;
1260 1078 CDS
ID metaerg.pl|14644
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 1.19514; 11.0728; ; 1.17446; 13.4424;
>Feature NODE_153102_length_1261_cov_38.1683
450 337 bac_5SrRNA
ID metaerg.pl|14645
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 2.36454; 37.0378; 5.44734; 20.8722; 8.35373;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
1261 723 bac_23SrRNA
ID metaerg.pl|14646
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 2.36454; 37.0378; 5.44734; 20.8722; 8.35373;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JDFY01000001.4245946.4248815 1 539 evalue:0.0 qcov:100 identity:95.918;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Cellvibrionales;Cellvibrionaceae;
869 1237 CDS
ID metaerg.pl|14647
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Endozoicomonadaceae;g__Endozoicomonas;s__Endozoicomonas sp900299555;
genomedb_acc GCA_900299555.1;
genomedb_target db:genomedb|GCA_900299555.1|OODV01000021.1_1 1 122 evalue:2.9e-56 qcov:100.00 identity:91.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 2.36454; 37.0378; 5.44734; 20.8722; 8.35373;
>Feature NODE_154486_length_1251_cov_193.623
758 1 bac_16SrRNA
ID metaerg.pl|14648
Name bac_16SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.09083; 113.659; 10.7302; 136.549; 6.06812;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|MEHT01000048.404.1852 1 754 evalue:0.0 qcov:99 identity:97.878;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseinatronobacter;
1251 970 CDS
ID metaerg.pl|14649
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.09083; 113.659; 10.7302; 136.549; 6.06812;
>Feature NODE_156682_length_1236_cov_34.2456
1235 1 bac_23SrRNA
ID metaerg.pl|14650
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.134438; 35.4779; 0.135359; 0.405157; 34.8039;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AWEP01000011.646.3519 1 1235 evalue:0.0 qcov:100 identity:97.247;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Cellvibrionales;Cellvibrionaceae;Marinimicrobium;
>Feature NODE_156701_length_1236_cov_7.10584
3 1236 bac_23SrRNA
ID metaerg.pl|14651
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 28.4024; 4.26335; 11.7155; 7.8895; 4.53407;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_157242_length_1232_cov_6.03738
626 60 CDS
ID metaerg.pl|14652
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.13586; 8.57301; 4.81516; 13.6599; 0.13586;
417 1232 bac_23SrRNA
ID metaerg.pl|14653
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.13586; 8.57301; 4.81516; 13.6599; 0.13586;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FQ311868.317101.319862 2 816 evalue:0.0 qcov:99 identity:86.999;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;
>Feature NODE_158688_length_1222_cov_9.02742
910 805 bac_5SrRNA
ID metaerg.pl|14654
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.0876866; 9.96548; ; 10.1978; 0.14459;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_162197_length_1199_cov_14.9694
2 184 CDS
ID metaerg.pl|14655
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Nodularia;s__Nodularia sp002218065;
genomedb_acc GCF_002218065.1;
genomedb_target db:genomedb|GCF_002218065.1|WP_089092724.1 1 60 evalue:5.0e-22 qcov:100.00 identity:93.30;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.0658; ; 10.0658; ; ;
129 614 CDS
ID metaerg.pl|14656
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.0658; ; 10.0658; ; ;
1000 885 bac_5SrRNA
ID metaerg.pl|14657
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 10.0658; ; 10.0658; ; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_162342_length_1198_cov_226.101
871 11 bac_23SrRNA
ID metaerg.pl|14658
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 783.553; 457.002; 634.805; 2214.94; 339.58;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MRCG01000040.2239.5124 2 861 evalue:0.0 qcov:99 identity:97.093;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Phormidesmiales;Nodosilineaceae;Nodosilinea PCC-7104;
343 603 CDS
ID metaerg.pl|14659
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 783.553; 457.002; 634.805; 2214.94; 339.58;
1139 1064 tRNA
ID metaerg.pl|14660
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 783.553; 457.002; 634.805; 2214.94; 339.58;
name tRNA_Ala_tgc;
>Feature NODE_162508_length_1197_cov_11.7644
191 84 bac_5SrRNA
ID metaerg.pl|14661
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 24.8663; 8.34957; 13.5817; 0.836676; 2.09838;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
1197 312 bac_23SrRNA
ID metaerg.pl|14662
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 24.8663; 8.34957; 13.5817; 0.836676; 2.09838;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LFCJ01012606.2205.5269 2 886 evalue:0.0 qcov:99 identity:91.986;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;
>Feature NODE_165029_length_1181_cov_85.8819
1181 1 bac_23SrRNA
ID metaerg.pl|14663
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 2.55771; 39.161; 1.99806; 1.27449; 33.3307;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FOUE01000011.2296.5189 1 1181 evalue:0.0 qcov:100 identity:91.436;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;
>Feature NODE_165053_length_1181_cov_9.87034
283 358 tRNA
ID metaerg.pl|14664
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.795344; 9.9709; 1.07177; 1.45781; 6.64597;
name tRNA_Ala_tgc;
428 504 tRNA
ID metaerg.pl|14665
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.795344; 9.9709; 1.07177; 1.45781; 6.64597;
name tRNA_Ile_gat;
724 1178 bac_23SrRNA
ID metaerg.pl|14666
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.795344; 9.9709; 1.07177; 1.45781; 6.64597;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CEOD01025759.32438.35329 12 455 evalue:3.35e-119 qcov:98 identity:84.410;
rRNA_taxon Bacteria;Verrucomicrobia;
1179 730 CDS
ID metaerg.pl|14667
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.795344; 9.9709; 1.07177; 1.45781; 6.64597;
>Feature NODE_165489_length_1178_cov_29.4203
165 276 bac_5SrRNA
ID metaerg.pl|14668
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 17.2909; 0.142023; ; 17.4329;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
361 437 tRNA
ID metaerg.pl|14669
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 17.2909; 0.142023; ; 17.4329;
name tRNA_Met_cat;
991 1176 CDS
ID metaerg.pl|14670
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 17.2909; 0.142023; ; 17.4329;
>Feature NODE_165836_length_1176_cov_96.3363
1 1173 bac_23SrRNA
ID metaerg.pl|14671
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 12.6472; 176.067; 20.1277; 101.885; 41.4074;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP009687.1174987.1177921 1 1173 evalue:0.0 qcov:100 identity:92.766;
rRNA_taxon Bacteria;Firmicutes;Clostridia;Clostridiales;
585 1007 CDS
ID metaerg.pl|14672
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Alkalibacillaceae;g__Piscibacillus;s__Piscibacillus salipiscarius;
genomedb_acc GCA_001311865.1;
genomedb_target db:genomedb|GCA_001311865.1|BBCD01000047.1_1 3 140 evalue:3.5e-58 qcov:98.60 identity:84.10;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 12.6472; 176.067; 20.1277; 101.885; 41.4074;
>Feature NODE_168093_length_1163_cov_3.09025
124 1162 bac_23SrRNA
ID metaerg.pl|14673
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.750247; 18.2813; 0.513327; 11.3702; 5.64758;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LECT01000038.168634.171562 1 1039 evalue:0.0 qcov:100 identity:90.490;
rRNA_taxon Bacteria;Planctomycetes;Planctomycetacia;Pirellulales;
>Feature NODE_169485_length_1154_cov_163.995
1 1151 bac_23SrRNA
ID metaerg.pl|14674
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 177.982; 64.5598; 167.283; 139.719; 549.544;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 1151 evalue:0.0 qcov:100 identity:90.988;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;
>Feature NODE_169838_length_1152_cov_29.505
118 1151 bac_23SrRNA
ID metaerg.pl|14675
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.40719; 17.6587; 2.18563; 1.60379; 26.8553;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_170492_length_1148_cov_17.4593
2 253 CDS
ID metaerg.pl|14676
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__UBA2988;s__UBA2988 sp002346665;
genomedb_acc GCA_002346665.1;
genomedb_target db:genomedb|GCA_002346665.1|DEAG01000008.1_2 1 83 evalue:1.6e-21 qcov:100.00 identity:63.10;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 42.6222; 4.66834; 21.5371; 6.18136; 10.2355;
612 1148 bac_23SrRNA
ID metaerg.pl|14677
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 42.6222; 4.66834; 21.5371; 6.18136; 10.2355;
rRNA_target rRNA_target=db:silva_LSURef.fasta|GU568020.16979.19937 12 537 evalue:4.93e-148 qcov:98 identity:85.075;
rRNA_taxon Bacteria;Gemmatimonadetes;Gemmatimonadetes;
>Feature NODE_171577_length_1142_cov_8.82245
425 3 CDS
ID metaerg.pl|14678
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.148185; 9.59073; 0.189516; 9.92843; ;
390 1141 bac_23SrRNA
ID metaerg.pl|14679
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.148185; 9.59073; 0.189516; 9.92843; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CEUE01227269.64.2319 2 752 evalue:1.13e-170 qcov:99 identity:81.770;
rRNA_taxon Bacteria;Bacteroidetes;
858 418 CDS
ID metaerg.pl|14680
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__Gemmatimonadales;f__GWC2-71-9;g__Palsa-1233;s__Palsa-1233 sp003169895;
genomedb_acc GCA_003169895.1;
genomedb_target db:genomedb|GCA_003169895.1|PNAE01000011.1_1 4 146 evalue:2.1e-21 qcov:97.90 identity:47.60;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.148185; 9.59073; 0.189516; 9.92843; ;
>Feature NODE_172608_length_1136_cov_51.6549
1135 1 bac_23SrRNA
ID metaerg.pl|14681
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.33266; 57.0304; 0.959432; 45.2495; 9.48884;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JFGS01000070.2663.5504 1 1134 evalue:0.0 qcov:99 identity:89.965;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;
99 563 CDS
ID metaerg.pl|14682
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Bin98;f__Bin98;g__Bin98;s__Bin98 sp002238905;
genomedb_acc GCA_002238905.1;
genomedb_target db:genomedb|GCA_002238905.1|MPNG01000020.1_1 1 130 evalue:5.6e-25 qcov:84.40 identity:52.30;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.33266; 57.0304; 0.959432; 45.2495; 9.48884;
>Feature NODE_172985_length_1134_cov_18.8981
318 394 tRNA
ID metaerg.pl|14683
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.51728; 19.1291; 1.52439; 1.00407; 15.0833;
name tRNA_Ile_gat;
435 510 tRNA
ID metaerg.pl|14684
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.51728; 19.1291; 1.52439; 1.00407; 15.0833;
name tRNA_Ala_tgc;
986 1082 euk_5_8SrRNA
ID metaerg.pl|14685
Name euk_5_8SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.51728; 19.1291; 1.52439; 1.00407; 15.0833;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FTOU01000039.475.3305 1 97 evalue:1.06e-37 qcov:100 identity:95.876;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;
>Feature NODE_173879_length_1129_cov_76.5857
1 1129 bac_23SrRNA
ID metaerg.pl|14686
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 48.2339; 68.1502; 82.1338; 390.239; 191.721;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FMBM01000002.2213986.2217261 1 1129 evalue:0.0 qcov:100 identity:95.848;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Beijerinckiaceae;
152 364 CDS
ID metaerg.pl|14687
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 48.2339; 68.1502; 82.1338; 390.239; 191.721;
>Feature NODE_174946_length_1123_cov_33.1695
1 633 CDS
ID metaerg.pl|14688
allec_ids 1.1.1.23;
allgo_ids GO:0000105; GO:0004399; GO:0008270; GO:0051287; GO:0055114;
allko_ids K00013; K01496; K15509;
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Marinococcaceae;g__Salsuginibacillus;s__Salsuginibacillus kocurii;
genomedb_acc GCF_000377705.1;
genomedb_target db:genomedb|GCF_000377705.1|WP_018922716.1 1 208 evalue:2.0e-102 qcov:99.00 identity:88.50;
kegg_pathway_id 00340;
kegg_pathway_name Histidine metabolism;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 42.5694; ; 2.30935; 40.26;
metacyc_pathway_id PRPP-PWY; HISTSYN-PWY;
metacyc_pathway_name superpathway of histidine, purine, and pyrimidine biosynthesis;; L-histidine biosynthesis;;
metacyc_pathway_type Super-Pathways;; HISTIDINE-SYN;;
pfam_acc PF00815;
pfam_desc Histidinol dehydrogenase;
pfam_id Histidinol_dh;
pfam_target db:Pfam-A.hmm|PF00815.20 evalue:4.5e-67 score:226.1 best_domain_score:225.8 name:Histidinol_dh;
sprot_desc Histidinol dehydrogenase 1;
sprot_id sp|Q5WIU9|HISX1_BACSK;
sprot_target db:uniprot_sprot|sp|Q5WIU9|HISX1_BACSK 1 205 evalue:2.3e-92 qcov:97.60 identity:78.50;
855 742 bac_5SrRNA
ID metaerg.pl|14689
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 42.5694; ; 2.30935; 40.26;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_175516_length_1120_cov_70.8629
1120 1 bac_23SrRNA
ID metaerg.pl|14690
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 119.293; 1.72268; 26.5866; 87.1278; 3.85567;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LCWZ01001825.113.2262 1 1120 evalue:0.0 qcov:100 identity:94.107;
rRNA_taxon Bacteria;Firmicutes;Clostridia;Clostridiales;
>Feature NODE_175716_length_1119_cov_5.32801
1 1119 arc_23SrRNA
ID metaerg.pl|14691
Name arc_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 8.62229; ; 8.62229; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AOHV01000046.33520.36428 1 1119 evalue:0.0 qcov:100 identity:98.391;
rRNA_taxon Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halococcaceae;Halalkalicoccus;
742 125 CDS
ID metaerg.pl|14692
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Natrialbaceae;g__Tc-Br11;s__Tc-Br11 sp001564275;
genomedb_acc GCA_001564275.1;
genomedb_target db:genomedb|GCA_001564275.1|LKND01000062.1_21 3 180 evalue:1.2e-59 qcov:86.80 identity:69.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 8.62229; ; 8.62229; ;
>Feature NODE_177569_length_1109_cov_8.66414
375 3 bac_16SrRNA
ID metaerg.pl|14693
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 7.45881; ; ; 7.45881; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|HQ397362.1.1492 1 369 evalue:5.77e-153 qcov:99 identity:93.225;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;
>Feature NODE_178333_length_1105_cov_8.52095
415 173 CDS
ID metaerg.pl|14694
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 7.36335; ; 7.36335; ;
903 796 bac_5SrRNA
ID metaerg.pl|14695
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 7.36335; ; 7.36335; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CXYX01000012.1.2987 1 108 evalue:4.44e-27 qcov:100 identity:87.037;
rRNA_taxon Bacteria;Firmicutes;Clostridia;
>Feature NODE_178510_length_1104_cov_9.44328
455 3 CDS
ID metaerg.pl|14696
allgo_ids GO:0005525; GO:0005737; GO:0005886; GO:0003924; GO:0070181; GO:0042274;
allko_ids K03595;
genomedb_OC d__Bacteria;p__Gemmatimonadota;c__Gemmatimonadetes;o__SG8-23;f__UBA6960;g__SZUA-318;s__SZUA-318 sp003248075;
genomedb_acc GCA_003248075.1;
genomedb_target db:genomedb|GCA_003248075.1|QJYK01000206.1_4 19 149 evalue:2.8e-29 qcov:86.80 identity:50.40;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 4.93396; 8.73375; 2.22642; 8.72956; 24.6237;
pfam_acc PF00350; PF02421; PF01926;
pfam_desc Dynamin family; Ferrous iron transport protein B; 50S ribosome-binding GTPase;
pfam_id Dynamin_N; FeoB_N; MMR_HSR1;
pfam_target db:Pfam-A.hmm|PF00350.23 evalue:5.3e-10 score:38.8 best_domain_score:25.8 name:Dynamin_N; db:Pfam-A.hmm|PF02421.18 evalue:8.5e-09 score:34.4 best_domain_score:34.1 name:FeoB_N; db:Pfam-A.hmm|PF01926.23 evalue:3.9e-18 score:64.8 best_domain_score:64.6 name:MMR_HSR1;
sprot_desc GTPase Era;
sprot_id sp|B3ETC6|ERA_AMOA5;
sprot_target db:uniprot_sprot|sp|B3ETC6|ERA_AMOA5 20 146 evalue:1.2e-21 qcov:84.10 identity:40.90;
tigrfam_acc TIGR00231;
tigrfam_desc small GTP-binding protein domain;
tigrfam_mainrole Unknown function;
tigrfam_name small_GTP;
tigrfam_sub1role General;
tigrfam_target db:TIGRFAMs.hmm|TIGR00231 evalue:3.3e-17 score:61.9 best_domain_score:61.8 name:TIGR00231;
720 609 bac_5SrRNA
ID metaerg.pl|14697
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 4.93396; 8.73375; 2.22642; 8.72956; 24.6237;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FCOQ01000015.5.2926 37 89 evalue:7.90e-15 qcov:47 identity:94.340;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;
>Feature NODE_178971_length_1102_cov_3.25597
1102 10 bac_23SrRNA
ID metaerg.pl|14698
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.375; 6.3687; 57.645; 4.29727; 73.6859;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AF245371.1.2907 1 1093 evalue:0.0 qcov:100 identity:95.059;
rRNA_taxon Bacteria;Planctomycetes;Planctomycetacia;Pirellulales;Pirellulaceae;
142 480 CDS
ID metaerg.pl|14699
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Pelagibacterales;f__Pelagibacteraceae;g__Pelagibacter_A;s__Pelagibacter_A sp003282835;
genomedb_acc GCA_003282835.1;
genomedb_target db:genomedb|GCA_003282835.1|QBYL01000002.1_55 1 112 evalue:2.5e-35 qcov:100.00 identity:75.00;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.375; 6.3687; 57.645; 4.29727; 73.6859;
470 715 CDS
ID metaerg.pl|14700
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Legionellales;f__Legionellaceae;g__Legionella;s__Legionella pneumophila;
genomedb_acc GCF_000008485.1;
genomedb_target db:genomedb|GCF_000008485.1|YP_094358.1 1 74 evalue:1.5e-16 qcov:91.40 identity:64.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.375; 6.3687; 57.645; 4.29727; 73.6859;
>Feature NODE_179824_length_1097_cov_22.1065
1096 746 CDS
ID metaerg.pl|14701
allec_ids 3.2.2.-;
allgo_ids GO:0003677; GO:0003905; GO:0006284;
allko_ids K03652;
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides;s__Nocardioides sp001428565;
genomedb_acc GCF_001428565.1;
genomedb_target db:genomedb|GCF_001428565.1|WP_056749716.1 3 113 evalue:1.2e-19 qcov:95.70 identity:58.80;
kegg_pathway_id 03410;
kegg_pathway_name Base excision repair;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.536431; 19.6336; 1.96515; 29.735; 7.59979;
metacyc_pathway_id PWY-2681; PWY-5381;
metacyc_pathway_name trans-zeatin biosynthesis;; pyridine nucleotide cycling (plants);;
metacyc_pathway_type CYTOKININ-BIOSYNTHESIS;; NAD-Metabolism;;
pfam_acc PF02245;
pfam_desc Methylpurine-DNA glycosylase (MPG);
pfam_id Pur_DNA_glyco;
pfam_target db:Pfam-A.hmm|PF02245.16 evalue:1.1e-19 score:69.8 best_domain_score:69.7 name:Pur_DNA_glyco;
sprot_desc Putative 3-methyladenine DNA glycosylase;
sprot_id sp|A1UH86|3MGH_MYCSK;
sprot_target db:uniprot_sprot|sp|A1UH86|3MGH_MYCSK 4 113 evalue:4.6e-18 qcov:94.80 identity:49.10;
>Feature NODE_182017_length_1085_cov_71.2301
1 561 bac_23SrRNA
ID metaerg.pl|14702
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 13.3241; 52.385; 5.61818; 72.3187; 0.991444;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AFPO01000022.271.3149 1 561 evalue:0.0 qcov:100 identity:97.513;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Idiomarinaceae;Idiomarina;
756 869 bac_5SrRNA
ID metaerg.pl|14703
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 13.3241; 52.385; 5.61818; 72.3187; 0.991444;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP019293.161619.164402 2 114 evalue:3.66e-33 qcov:99 identity:89.565;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;
>Feature NODE_182251_length_1084_cov_4.95432
859 1 bac_23SrRNA
ID metaerg.pl|14704
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 3.58994; 7.84582; 25.7077; 42.0675; 4.92398;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AMZY02000036.296.3060 1 849 evalue:0.0 qcov:99 identity:87.836;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;
1 240 CDS
ID metaerg.pl|14705
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Maribacter;s__Maribacter sp003075045;
genomedb_acc GCA_003075045.1;
genomedb_target db:genomedb|GCA_003075045.1|QCZD01000011.1_1 1 75 evalue:4.9e-17 qcov:94.90 identity:65.30;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 3.58994; 7.84582; 25.7077; 42.0675; 4.92398;
>Feature NODE_183356_length_1078_cov_48.9296
1075 1 bac_16SrRNA
ID metaerg.pl|14706
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 24.3556; 136.415; 29.0065; 11.4138; 71.639;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JX240552.1.1537 1 1070 evalue:0.0 qcov:99 identity:96.007;
rRNA_taxon Bacteria;Chloroflexi;Chloroflexia;Thermomicrobiales;Thermomicrobiaceae;
>Feature NODE_183358_length_1078_cov_42.3421
555 443 bac_5SrRNA
ID metaerg.pl|14707
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.03879; 28.6638; 2.42996; 22.3168; 2.87823;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
1078 656 bac_23SrRNA
ID metaerg.pl|14708
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.03879; 28.6638; 2.42996; 22.3168; 2.87823;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP003390.2592169.2595424 1 423 evalue:0.0 qcov:100 identity:96.927;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Nitrosococcales;Methylophagaceae;
>Feature NODE_184717_length_1071_cov_58.9104
2 468 bac_23SrRNA
ID metaerg.pl|14709
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 63.2291; 46.9207; 27.1585; 143.944; 6.63518;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AMGM01000163.102.2981 1 465 evalue:0.0 qcov:99 identity:98.280;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;Cyclobacteriaceae;Cecembia;
647 752 bac_5SrRNA
ID metaerg.pl|14710
Name bac_5SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 63.2291; 46.9207; 27.1585; 143.944; 6.63518;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_184926_length_1070_cov_90.3941
1 928 bac_23SrRNA
ID metaerg.pl|14711
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 8.75109; 99.5804; 5.01848; 10.25; 123.6;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 928 evalue:0.0 qcov:100 identity:93.991;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;
1022 1070 bac_5SrRNA
ID metaerg.pl|14712
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 8.75109; 99.5804; 5.01848; 10.25; 123.6;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_185123_length_1069_cov_145.99
758 1 bac_16SrRNA
ID metaerg.pl|14713
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 109.485; 17.5495; 60.3928; 17.8346; 13.7084;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KM077019.1.1436 1 754 evalue:0.0 qcov:99 identity:97.881;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobaculum;
>Feature NODE_187159_length_1059_cov_26.2888
269 1059 bac_16SrRNA
ID metaerg.pl|14714
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 33.154; 9.11441; 16.8262; 12.4939; 71.5886;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KF097544.1.1343 24 791 evalue:0.0 qcov:97 identity:96.494;
rRNA_taxon Bacteria;Actinobacteria;Acidimicrobiia;Microtrichales;Microtrichaceae;
>Feature NODE_187997_length_1055_cov_7.92
1 382 euk_18SrRNA
ID metaerg.pl|14715
Name euk_18SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 11.6365; ; 11.6365; ; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|AGNK02004036.37.1339 1 376 evalue:0.0 qcov:98 identity:99.734;
rRNA_taxon Eukaryota;Archaeplastida;Chloroplastida;Charophyta;Phragmoplastophyta;Streptophyta;Embryophyta;
849 325 CDS
ID metaerg.pl|14716
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 11.6365; ; 11.6365; ; ;
610 763 euk_5_8SrRNA
ID metaerg.pl|14717
Name euk_5_8SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 11.6365; ; 11.6365; ; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AOFL01026766.1.3344 1 154 evalue:3.84e-74 qcov:100 identity:99.351;
rRNA_taxon Eukaryota;Archaeplastida;Chloroplastida;Charophyta;Phragmoplastophyta;
>Feature NODE_188211_length_1054_cov_4.06006
>Feature NODE_188434_length_1053_cov_4.15531
821 2 euk_28SrRNA
ID metaerg.pl|14718
Name euk_28SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 15.0775; 3.11517; 8.0598; 3.39646; 0.506091;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_189823_length_1047_cov_2.51512
45 1047 euk_18SrRNA
ID metaerg.pl|14719
Name euk_18SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.45485; 13.9153; 0.978818; 7.4738; 5.0078;
rRNA_target RNA_target=db:silva_SSURef_Nr99.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_189626_length_1047_cov_82.7077
1 518 bac_23SrRNA
ID metaerg.pl|14720
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 8.32776; 28.806; 9.27982; 1.63545; 48.0491;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP009455.3181982.3184894 1 518 evalue:0.0 qcov:100 identity:95.946;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;
712 825 bac_5SrRNA
ID metaerg.pl|14721
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 8.32776; 28.806; 9.27982; 1.63545; 48.0491;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_189841_length_1046_cov_151.591
436 1046 bac_23SrRNA
ID metaerg.pl|14722
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 296.645; 5.45647; 281.679; 2.75893; 6.75223;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 10 611 evalue:0.0 qcov:99 identity:88.040;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;
551 766 CDS
ID metaerg.pl|14723
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 296.645; 5.45647; 281.679; 2.75893; 6.75223;
>Feature NODE_190293_length_1044_cov_8.41658
400 2 euk_28SrRNA
ID metaerg.pl|14724
Name euk_28SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 14.3434; ; 14.3434;
rRNA_target rRNA_target=db:silva_LSURef.fasta|KT874468.4557.7947 1 399 evalue:0.0 qcov:100 identity:95.990;
rRNA_taxon Eukaryota;Archaeplastida;Chloroplastida;Charophyta;Phragmoplastophyta;
767 614 euk_5_8SrRNA
ID metaerg.pl|14725
Name euk_5_8SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 14.3434; ; 14.3434;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LT593966.2681.6386 1 154 evalue:2.31e-71 qcov:100 identity:98.052;
rRNA_taxon Eukaryota;Archaeplastida;Chloroplastida;Charophyta;Phragmoplastophyta;
>Feature NODE_194199_length_1026_cov_3.03296
3 500 CDS
ID metaerg.pl|14726
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 4.94635; ; ; 4.94635;
>Feature NODE_194034_length_1026_cov_115.229
1 943 bac_23SrRNA
ID metaerg.pl|14727
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 177.636; 1188.45; 142.938; 1606.84; 97.8094;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ARNL01000040.160481.163312 1 943 evalue:0.0 qcov:100 identity:98.303;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Loktanella;
813 355 CDS
ID metaerg.pl|14728
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Bin36;s__Bin36 sp002239085;
genomedb_acc GCA_002239085.1;
genomedb_target db:genomedb|GCA_002239085.1|MPNP01000003.1_19 1 152 evalue:7.1e-73 qcov:100.00 identity:90.10;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 177.636; 1188.45; 142.938; 1606.84; 97.8094;
>Feature NODE_194262_length_1025_cov_48.1485
1025 1 bac_23SrRNA
ID metaerg.pl|14729
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0354286; 25.7131; ; 0.168; 25.9166;
rRNA_target rRNA_target=db:silva_LSURef.fasta|BBRJ01000003.250976.254062 1 1025 evalue:0.0 qcov:100 identity:94.547;
rRNA_taxon Bacteria;Actinobacteria;Actinobacteria;Micrococcales;
2 208 CDS
ID metaerg.pl|14730
allgo_ids GO:0009507;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Synechococcales;f__Cyanobiaceae;g__Prochlorococcus_B;s__Prochlorococcus_B sp003215695;
genomedb_acc GCA_003215695.1;
genomedb_target db:genomedb|GCA_003215695.1|QCJZ01000062.1_1 1 68 evalue:5.0e-26 qcov:100.00 identity:86.80;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0354286; 25.7131; ; 0.168; 25.9166;
sprot_desc hypothetical protein;
sprot_id sp|Q3BAI2|YCX91_PHAAO;
sprot_target db:uniprot_sprot|sp|Q3BAI2|YCX91_PHAAO 2 68 evalue:1.1e-16 qcov:98.50 identity:64.20;
>Feature NODE_195002_length_1022_cov_5.71355
>Feature NODE_195532_length_1020_cov_3.25596
233 3 CDS
ID metaerg.pl|14731
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 5.73793; ; ; 5.73793; ;
70 1020 bac_23SrRNA
ID metaerg.pl|14732
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 5.73793; ; ; 5.73793; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP020382.2903900.2906833 2 951 evalue:0.0 qcov:99 identity:86.639;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;
>Feature NODE_196946_length_1013_cov_31.6524
375 1 CDS
ID metaerg.pl|14733
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 2.86906; 26.3615; 4.24913; 4.97219; 14.2711;
479 1013 bac_16SrRNA
ID metaerg.pl|14734
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 2.86906; 26.3615; 4.24913; 4.97219; 14.2711;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JQ739031.1.1345 76 535 evalue:1.08e-161 qcov:86 identity:89.224;
rRNA_taxon Bacteria;Proteobacteria;Deltaproteobacteria;
1011 640 CDS
ID metaerg.pl|14735
genomedb_OC d__Bacteria;p__AABM5-125-24;c__AABM5-125-24;o__AABM5-125-24;f__AABM5-125-24;g__AABM5-125-24;s__AABM5-125-24 sp002127415;
genomedb_acc GCA_002127415.1;
genomedb_target db:genomedb|GCA_002127415.1|MWJR01000104.1_3 1 104 evalue:7.4e-36 qcov:84.60 identity:75.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 2.86906; 26.3615; 4.24913; 4.97219; 14.2711;
>Feature NODE_196933_length_1013_cov_83.7777
975 1 bac_16SrRNA
ID metaerg.pl|14740
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.49942; 119.035; 11.971; 56.3001; 47.2642;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JMIH01000044.39.1569 1 970 evalue:0.0 qcov:99 identity:93.846;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;
>Feature NODE_196955_length_1013_cov_16.4447
1 475 bac_16SrRNA
ID metaerg.pl|14736
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 17.0765; ; 3.53418; 12.971; 0.571263;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JN178612.1.1468 1 463 evalue:0.0 qcov:97 identity:94.600;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;
56 307 CDS
ID metaerg.pl|14737
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter;s__Pedobacter sp002455875;
genomedb_acc GCA_002455875.1;
genomedb_target db:genomedb|GCA_002455875.1|DKLI01000127.1_4 8 83 evalue:2.0e-21 qcov:91.60 identity:73.70;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 17.0765; ; 3.53418; 12.971; 0.571263;
574 649 tRNA
ID metaerg.pl|14738
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 17.0765; ; 3.53418; 12.971; 0.571263;
name tRNA_Ile_gat;
717 791 tRNA
ID metaerg.pl|14739
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 17.0765; ; 3.53418; 12.971; 0.571263;
name tRNA_Ala_tgc;
>Feature NODE_198278_length_1007_cov_163.507
317 241 tRNA
ID metaerg.pl|14741
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 562.204; 16.1214; 503.698; 16.6289; 25.7561;
name tRNA_Met_cat;
467 355 bac_5SrRNA
ID metaerg.pl|14742
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 562.204; 16.1214; 503.698; 16.6289; 25.7561;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
1006 611 bac_23SrRNA
ID metaerg.pl|14743
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 562.204; 16.1214; 503.698; 16.6289; 25.7561;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MEHS01000004.201703.204603 1 396 evalue:0.0 qcov:100 identity:99.495;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobaca;
742 1005 CDS
ID metaerg.pl|14744
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Bin36;s__Bin36 sp002239085;
genomedb_acc GCA_002239085.1;
genomedb_target db:genomedb|GCA_002239085.1|MPNP01000003.1_19 1 88 evalue:1.1e-38 qcov:100.00 identity:93.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 562.204; 16.1214; 503.698; 16.6289; 25.7561;
>Feature NODE_199618_length_1001_cov_139.381
252 1001 bac_16SrRNA
ID metaerg.pl|14745
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 4.60635; 8.56874; 146.57; 0.821387; 160.566;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KJ094110.1.1324 5 748 evalue:0.0 qcov:99 identity:97.987;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Seohaeicola;
>Feature NODE_200751_length_996_cov_112.801
144 296 euk_5_8SrRNA
ID metaerg.pl|14746
Name euk_5_8SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 2294.67; 0.347518; ; 2293.63; 0.692671;
rRNA_target rRNA_target=db:silva_LSURef.fasta|GFJR01009237.2848.6561 1 115 evalue:1.85e-42 qcov:75 identity:93.913;
rRNA_taxon Eukaryota;Opisthokonta;Nucletmycea;Fungi;
545 966 euk_28SrRNA
ID metaerg.pl|14747
Name euk_28SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 2294.67; 0.347518; ; 2293.63; 0.692671;
rRNA_target rRNA_target=db:silva_LSURef.fasta|HE610118.705.4008 1 422 evalue:6.14e-176 qcov:100 identity:93.128;
rRNA_taxon Eukaryota;Archaeplastida;
>Feature NODE_201699_length_992_cov_39.5379
625 4 bac_23SrRNA
ID metaerg.pl|14748
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 25.6223; 106.266; 18.2506; 50.9287; 11.4644;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FUFK010831163.39.3094 4 622 evalue:0.0 qcov:99 identity:89.032;
rRNA_taxon Bacteria;Actinobacteria;Acidimicrobiia;
197 424 CDS
ID metaerg.pl|14749
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 25.6223; 106.266; 18.2506; 50.9287; 11.4644;
756 992 CDS
ID metaerg.pl|14750
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 25.6223; 106.266; 18.2506; 50.9287; 11.4644;
>Feature NODE_201695_length_992_cov_52.8282
514 991 bac_23SrRNA
ID metaerg.pl|14751
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 33.6473; 1.67815; 1.61995; 28.0404; 2.30879;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 478 evalue:2.56e-165 qcov:100 identity:88.820;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;
>Feature NODE_202178_length_990_cov_121.834
538 1 bac_23SrRNA
ID metaerg.pl|14752
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.37143; 173.77; 13.3452; 5.14881; 197.636;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 538 evalue:4.84e-163 qcov:100 identity:86.059;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;
423 130 CDS
ID metaerg.pl|14753
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 5.37143; 173.77; 13.3452; 5.14881; 197.636;
>Feature NODE_202829_length_988_cov_3.30225
404 8 bac_23SrRNA
ID metaerg.pl|14754
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 5.642; ; 0.0393795; 5.68138; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AP017433.54214.56994 1 319 evalue:5.13e-77 qcov:80 identity:83.234;
rRNA_taxon Bacteria;Proteobacteria;
978 526 bac_23SrRNA
ID metaerg.pl|14755
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 5.642; ; 0.0393795; 5.68138; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_202964_length_987_cov_11.3122
987 2 euk_28SrRNA
ID metaerg.pl|14756
Name euk_28SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.0800478; ; 17.718; ; 17.7981;
rRNA_target rRNA_target=db:silva_LSURef.fasta|HG315108.3334.6730 1 986 evalue:0.0 qcov:100 identity:98.580;
rRNA_taxon Eukaryota;Archaeplastida;Chloroplastida;Charophyta;Phragmoplastophyta;
>Feature NODE_203193_length_986_cov_53.8657
340 985 bac_23SrRNA
ID metaerg.pl|14757
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 130.397; ; 55.2919; 75.1053; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FOGV01000054.2201.5143 1 646 evalue:0.0 qcov:100 identity:98.762;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;Sporolactobacillaceae;Salisediminibacterium;
>Feature NODE_203442_length_985_cov_209.282
228 985 bac_16SrRNA
ID metaerg.pl|14758
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 137.679; 13.1952; 103.722; 9.81198; 10.9497;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|MEHT01000048.404.1852 5 758 evalue:0.0 qcov:99 identity:97.878;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseinatronobacter;
>Feature NODE_204138_length_982_cov_55.6268
437 1 bac_23SrRNA
ID metaerg.pl|14759
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 21.2488; 1.16106; 30.4603; 16.8089; 69.6791;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP015039.820712.823568 1 437 evalue:5.14e-147 qcov:100 identity:88.409;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;
980 606 CDS
ID metaerg.pl|14760
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 21.2488; 1.16106; 30.4603; 16.8089; 69.6791;
>Feature NODE_204827_length_979_cov_71.3896
131 35 euk_5_8SrRNA
ID metaerg.pl|14761
Name euk_5_8SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 3.12425; 59.2244; 1.53197; 65.0277; 1.14717;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FTOM01000018.2378.5214 1 97 evalue:1.06e-37 qcov:100 identity:95.876;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;
620 544 tRNA
ID metaerg.pl|14762
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 3.12425; 59.2244; 1.53197; 65.0277; 1.14717;
name tRNA_Ile_gat;
746 671 tRNA
ID metaerg.pl|14763
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 3.12425; 59.2244; 1.53197; 65.0277; 1.14717;
name tRNA_Ala_tgc;
>Feature NODE_209208_length_962_cov_3.58214
264 376 bac_5SrRNA
ID metaerg.pl|14764
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 1.88547; 4.9101; 5.66872; 14.3448; 1.88054;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
961 518 CDS
ID metaerg.pl|14765
allec_ids 2.7.-.-;
allgo_ids GO:0016021; GO:0005886; GO:0005524; GO:0004672; GO:0010795; GO:0006744;
allko_ids K03688;
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella;s__Wenzhouxiangella marina;
genomedb_acc GCF_001187785.1;
genomedb_target db:genomedb|GCF_001187785.1|WP_049727084.1 1 147 evalue:5.5e-54 qcov:100.00 identity:70.70;
kegg_pathway_id 00130;
kegg_pathway_name Ubiquinone biosynthesis;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 1.88547; 4.9101; 5.66872; 14.3448; 1.88054;
sprot_desc Probable protein kinase UbiB;
sprot_id sp|Q2P8Q0|UBIB_XANOM;
sprot_target db:uniprot_sprot|sp|Q2P8Q0|UBIB_XANOM 1 143 evalue:6.8e-19 qcov:97.30 identity:39.60;
tm_num 2;
961 518 transmembrane_helix
ID metaerg.pl|14766
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 1.88547; 4.9101; 5.66872; 14.3448; 1.88054;
topology i812-865o878-946i;
>Feature NODE_211477_length_953_cov_5.0902
200 3 CDS
ID metaerg.pl|14767
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Vibrionaceae;g__Vibrio;s__Vibrio marisflavi;
genomedb_acc GCA_003263805.1;
genomedb_target db:genomedb|GCA_003263805.1|JYJM01000075.1_1 12 66 evalue:6.1e-21 qcov:83.30 identity:92.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.692403; 11.3001; 0.88792; 8.45205; 1.26775;
233 309 tRNA
ID metaerg.pl|14768
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.692403; 11.3001; 0.88792; 8.45205; 1.26775;
name tRNA_Ile_gat;
319 394 tRNA
ID metaerg.pl|14769
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.692403; 11.3001; 0.88792; 8.45205; 1.26775;
name tRNA_Ala_tgc;
>Feature NODE_212261_length_950_cov_9.84134
464 1 arc_23SrRNA
ID metaerg.pl|14770
Name arc_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 14.3813; ; ; 14.3813;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CBMA010000055.2206.5118 1 464 evalue:0.0 qcov:100 identity:94.206;
rRNA_taxon Archaea;Euryarchaeota;Halobacteria;Halobacteriales;
1 366 CDS
ID metaerg.pl|14771
genomedb_OC d__Archaea;p__Halobacterota;c__Halobacteria;o__Halobacteriales;f__Natrialbaceae;g__Tc-Br11;s__Tc-Br11 sp001564275;
genomedb_acc GCA_001564275.1;
genomedb_target db:genomedb|GCA_001564275.1|LKND01000062.1_21 1 121 evalue:2.0e-25 qcov:100.00 identity:59.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 14.3813; ; ; 14.3813;
769 698 tRNA
ID metaerg.pl|14772
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 14.3813; ; ; 14.3813;
name tRNA_Ala_tgc;
>Feature NODE_213889_length_944_cov_5.28796
132 944 bac_23SrRNA
ID metaerg.pl|14773
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 8.733; 0.52267; ; 9.43577; 0.180101;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JRLY01000041.83.2970 6 813 evalue:0.0 qcov:99 identity:82.742;
rRNA_taxon Bacteria;Bacteroidetes;
390 644 CDS
ID metaerg.pl|14774
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 8.733; 0.52267; ; 9.43577; 0.180101;
>Feature NODE_214356_length_942_cov_100.601
142 372 CDS
ID metaerg.pl|14775
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E sp003290225;
genomedb_acc GCA_003290225.1;
genomedb_target db:genomedb|GCA_003290225.1|CP029983.1_62 10 76 evalue:2.4e-29 qcov:88.20 identity:97.00;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 8.90152; 31.2614; 22.846; 2.97096; 65.9798;
942 175 bac_16SrRNA
ID metaerg.pl|14776
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 8.90152; 31.2614; 22.846; 2.97096; 65.9798;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|AONB01000049.48.1571 13 768 evalue:0.0 qcov:98 identity:98.016;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Nitrincolaceae;Nitrincola;
>Feature NODE_214363_length_942_cov_55.3033
81 156 tRNA
ID metaerg.pl|14777
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 1.98359; 219.832; 4.52525; 7.77146; 205.552;
name tRNA_Ala_tgc;
>Feature NODE_218110_length_928_cov_29.5899
284 927 bac_23SrRNA
ID metaerg.pl|14778
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.133676; 30.1581; ; 27.527; 2.49743;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FOGT01000034.2155.5096 1 644 evalue:0.0 qcov:100 identity:92.154;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;
>Feature NODE_218939_length_925_cov_7.11954
621 1 bac_16SrRNA
ID metaerg.pl|14779
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 20.3897; 3.55226; 4.44645; 7.04516; 5.34581;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|LFIK01006839.4198.5735 1 617 evalue:0.0 qcov:99 identity:95.793;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Opitutales;uncultured;
>Feature NODE_219451_length_923_cov_42.1175
80 921 bac_23SrRNA
ID metaerg.pl|14780
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 3.02717; 14.1397; 25.903; 4.02199; 47.0919;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CEVN01115676.1833.5057 1 842 evalue:0.0 qcov:100 identity:91.114;
rRNA_taxon Bacteria;Patescibacteria;Parcubacteria;OLB19;
922 323 CDS
ID metaerg.pl|14781
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 3.02717; 14.1397; 25.903; 4.02199; 47.0919;
>Feature NODE_222501_length_913_cov_2.61772
325 913 bac_23SrRNA
ID metaerg.pl|14782
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 4.84666; ; 4.84535; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CXWK01000304.15632.18688 9 589 evalue:0.0 qcov:99 identity:87.650;
rRNA_taxon Bacteria;Actinobacteria;Acidimicrobiia;
>Feature NODE_223204_length_910_cov_5.9883
507 403 bac_5SrRNA
ID metaerg.pl|14785
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 9.225; 0.268421; 0.232895; 8.08816; 0.635526;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_223163_length_910_cov_13.9977
315 1 bac_16SrRNA
ID metaerg.pl|14783
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 32.1579; 4.23026; 11.0421; 12.4513; 59.8816;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|DQ015831.1.1485 1 311 evalue:1.07e-129 qcov:99 identity:93.631;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Balneolales;
704 910 CDS
ID metaerg.pl|14784
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 32.1579; 4.23026; 11.0421; 12.4513; 59.8816;
>Feature NODE_224247_length_906_cov_144.227
3 426 bac_16SrRNA
ID metaerg.pl|14786
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 188.073; 30.1045; 0.580688; 218.91; 0.152116;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|CP001791.574349.575903 1 411 evalue:0.0 qcov:97 identity:98.783;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;Sporolactobacillaceae;Salipaludibacillus;
72 326 CDS
ID metaerg.pl|14787
genomedb_OC d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Amphibacillaceae;g__Lentibacillus;s__Lentibacillus juripiscarius;
genomedb_acc GCA_001311805.1;
genomedb_target db:genomedb|GCA_001311805.1|BBCA01000131.1_2 1 84 evalue:9.5e-35 qcov:100.00 identity:91.70;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 188.073; 30.1045; 0.580688; 218.91; 0.152116;
906 445 CDS
ID metaerg.pl|14788
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 188.073; 30.1045; 0.580688; 218.91; 0.152116;
>Feature NODE_224847_length_904_cov_49.1496
785 2 bac_23SrRNA
ID metaerg.pl|14789
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 30.0477; 48.8793; 118.996; 10.6777; 208.601;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AACY020520518.1.1962 1 783 evalue:0.0 qcov:99 identity:92.366;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;
>Feature NODE_226622_length_898_cov_32.395
323 399 tRNA
ID metaerg.pl|14790
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 32.1203; 4.77807; 0.979947; 23.2941; 3.06818;
name tRNA_Ile_gat;
417 492 tRNA
ID metaerg.pl|14791
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 32.1203; 4.77807; 0.979947; 23.2941; 3.06818;
name tRNA_Ala_tgc;
>Feature NODE_227809_length_894_cov_6.56734
352 894 bac_16SrRNA
ID metaerg.pl|14792
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 37.2944; 7.08602; 9.04032; 11.0712; 10.0968;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|EU283594.1.1366 25 543 evalue:0.0 qcov:96 identity:95.954;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Balneolales;Balneolaceae;
>Feature NODE_228905_length_890_cov_60.188
339 1 bac_16SrRNA
ID metaerg.pl|14793
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 130.545; 17.3595; 91.4459; 7.08243; 14.6568;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JN427607.1.1453 1 330 evalue:2.37e-166 qcov:97 identity:98.788;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Gammaproteobacteria Incertae Sedis;Unknown Family;Wenzhouxiangella;
>Feature NODE_230112_length_886_cov_134.788
886 2 bac_23SrRNA
ID metaerg.pl|14796
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.75951; 195.48; 5.68614; 213.486; 4.56114;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 885 evalue:0.0 qcov:100 identity:91.986;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;
>Feature NODE_230111_length_886_cov_160.099
103 885 bac_16SrRNA
ID metaerg.pl|14794
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.796196; 1065.88; 3.96196; 988.527; 72.5978;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JQ738954.1.1538 6 783 evalue:0.0 qcov:99 identity:98.972;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;Sporolactobacillaceae;Alkalicoccus;
885 466 CDS
ID metaerg.pl|14795
genomedb_OC d__Bacteria;p__UBA8248;c__UBA8248;o__UBA8248;f__UBA3496;g__UBA3496;s__UBA3496 sp002377645;
genomedb_acc GCA_002377645.1;
genomedb_target db:genomedb|GCA_002377645.1|DFQF01000021.1_1 1 117 evalue:7.1e-27 qcov:84.20 identity:53.70;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.796196; 1065.88; 3.96196; 988.527; 72.5978;
>Feature NODE_230779_length_884_cov_30.3667
557 884 bac_16SrRNA
ID metaerg.pl|14797
Name bac_16SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 26.218; 0.459128; 26.6771; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JX240462.1.1499 5 328 evalue:4.98e-158 qcov:99 identity:97.840;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Cellvibrionales;Cellvibrionaceae;Marinimicrobium;
>Feature NODE_231280_length_883_cov_2.77536
315 882 euk_18SrRNA
ID metaerg.pl|14800
Name euk_18SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.218281; 5.24284; 6.47476; 1.94952; 13.8854;
rRNA_target RNA_target=db:silva_SSURef_Nr99.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_231147_length_883_cov_4.23551
1 328 bac_23SrRNA
ID metaerg.pl|14798
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 8.11323; 11.8677; 7.41883; 4.14461; 31.5443;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ARXU01000024.289.3187 1 327 evalue:3.18e-88 qcov:99 identity:84.756;
rRNA_taxon Bacteria;Proteobacteria;
489 602 bac_5SrRNA
ID metaerg.pl|14799
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 8.11323; 11.8677; 7.41883; 4.14461; 31.5443;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_233176_length_876_cov_82.6931
443 876 bac_16SrRNA
ID metaerg.pl|14801
Name bac_16SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.4807; 58.6129; 1.50275; 71.5703; 0.973829;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|HM598402.1.1539 5 434 evalue:0.0 qcov:99 identity:98.837;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae;Halomonas;
876 685 CDS
ID metaerg.pl|14802
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Nitrosomonadaceae;g__GCA-2721545;s__GCA-2721545 sp003230615;
genomedb_acc GCA_003230615.1;
genomedb_target db:genomedb|GCA_003230615.1|QIFK01000045.1_3 1 63 evalue:5.6e-24 qcov:100.00 identity:85.70;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 10.4807; 58.6129; 1.50275; 71.5703; 0.973829;
>Feature NODE_233289_length_876_cov_3.74543
481 2 CDS
ID metaerg.pl|14803
allgo_ids GO:0003824; GO:0051536;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Spirosomaceae;g__Spirosoma;s__Spirosoma montaniterrae;
genomedb_acc GCF_001988955.1;
genomedb_target db:genomedb|GCF_001988955.1|WP_077133305.1 2 160 evalue:8.0e-59 qcov:99.40 identity:67.90;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.58678; ; ; 7.58678; ;
pfam_acc PF13353; PF04055;
pfam_desc 4Fe-4S single cluster domain; Radical SAM superfamily;
pfam_id Fer4_12; Radical_SAM;
pfam_target db:Pfam-A.hmm|PF13353.6 evalue:2.8e-05 score:23.6 best_domain_score:23.1 name:Fer4_12; db:Pfam-A.hmm|PF04055.21 evalue:1.7e-17 score:63.5 best_domain_score:63.4 name:Radical_SAM;
721 612 bac_5SrRNA
ID metaerg.pl|14804
Name bac_5SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.58678; ; ; 7.58678; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_234123_length_873_cov_6.06112
873 435 euk_28SrRNA
ID metaerg.pl|14805
Name euk_28SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 10.9599; ; 10.9599; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CVQI01009080.3982.7660 1 439 evalue:0.0 qcov:100 identity:95.011;
rRNA_taxon Eukaryota;Opisthokonta;Nucletmycea;Fungi;Dikarya;
>Feature NODE_236224_length_866_cov_107.689
221 865 bac_23SrRNA
ID metaerg.pl|14806
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.76257; 879.142; 2.78352; 58.6369; 816.959;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP001791.2937183.2940116 2 645 evalue:0.0 qcov:99 identity:93.653;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;
>Feature NODE_236238_length_866_cov_32.0173
141 216 tRNA
ID metaerg.pl|14808
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 4.48743; 46.7626; 5.68296; 13.5978; 22.9944;
name tRNA_Ala_tgc;
609 706 euk_5_8SrRNA
ID metaerg.pl|14809
Name euk_5_8SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 4.48743; 46.7626; 5.68296; 13.5978; 22.9944;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FTOM01000018.2378.5214 1 98 evalue:6.40e-40 qcov:100 identity:96.939;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;
>Feature NODE_236220_length_866_cov_236.932
1 543 CDS
ID metaerg.pl|14810
genomedb_OC d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Caldilineales;f__Bin34;g__Bin34;s__Bin34 sp002238555;
genomedb_acc GCA_002238555.1;
genomedb_target db:genomedb|GCA_002238555.1|MPMO01000072.1_14 2 134 evalue:1.0e-33 qcov:73.90 identity:61.30;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 384.708; 118.923; 83.6439; 642.292; 55.0168;
866 2 bac_23SrRNA
ID metaerg.pl|14811
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 384.708; 118.923; 83.6439; 642.292; 55.0168;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FNFV01000001.1315.4130 1 865 evalue:0.0 qcov:100 identity:92.078;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;
>Feature NODE_236222_length_866_cov_125.572
858 4 bac_23SrRNA
ID metaerg.pl|14807
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 80.1397; 85.3492; 48.6341; 45.2388; 259.36;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MRCJ01000016.352.3122 5 829 evalue:0.0 qcov:96 identity:92.624;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;
>Feature NODE_237622_length_862_cov_3.34944
230 3 CDS
ID metaerg.pl|14812
genomedb_OC d__Bacteria;p__Bacteroidota;c__Rhodothermia;o__Balneolales;f__HLUCCA01;g__UBA11400;s__UBA11400 sp003448835;
genomedb_acc GCA_003448835.1;
genomedb_target db:genomedb|GCA_003448835.1|HAC16114.1 7 76 evalue:5.2e-16 qcov:92.10 identity:58.60;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 6.14888; ; 6.09831; ; 0.0505618;
pfam_acc PF00535;
pfam_desc Glycosyl transferase family 2;
pfam_id Glycos_transf_2;
pfam_target db:Pfam-A.hmm|PF00535.26 evalue:6.4e-09 score:35.1 best_domain_score:34.9 name:Glycos_transf_2;
861 310 CDS
ID metaerg.pl|14813
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 6.14888; ; 6.09831; ; 0.0505618;
691 590 bac_5SrRNA
ID metaerg.pl|14814
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 6.14888; ; 6.09831; ; 0.0505618;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_237455_length_862_cov_184.917
11 86 tRNA
ID metaerg.pl|14815
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 279.163; 1.15871; 2.72191; 271.353; 3.93118;
name tRNA_Ala_tgc;
162 238 tRNA
ID metaerg.pl|14816
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 279.163; 1.15871; 2.72191; 271.353; 3.93118;
name tRNA_Ile_gat;
297 623 CDS
ID metaerg.pl|14817
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 279.163; 1.15871; 2.72191; 271.353; 3.93118;
>Feature NODE_237775_length_861_cov_159.164
1 670 bac_23SrRNA
ID metaerg.pl|14818
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 15.346; 297.287; 32.0661; 216.764; 33.1111;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JANL01000030.173.3087 9 670 evalue:0.0 qcov:99 identity:97.130;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Lactobacillales;Carnobacteriaceae;Alkalibacterium;
779 858 bac_5SrRNA
ID metaerg.pl|14819
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 15.346; 297.287; 32.0661; 216.764; 33.1111;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_237799_length_861_cov_22.5782
1 861 bac_23SrRNA
ID metaerg.pl|14820
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 2.60197; 20.2447; 3.9789; 29.5457; 2.72011;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MCRI01000075.39.2936 1 861 evalue:0.0 qcov:100 identity:93.908;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Nitrosococcales;
>Feature NODE_239824_length_855_cov_4.4275
855 2 bac_23SrRNA
ID metaerg.pl|14823
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.29929; 4.70922; 4.04539; 19.3574; 3.30355;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LFIK01012617.1.2454 1 854 evalue:0.0 qcov:100 identity:89.315;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;
194 3 CDS
ID metaerg.pl|14824
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 7.29929; 4.70922; 4.04539; 19.3574; 3.30355;
>Feature NODE_239988_length_855_cov_2.7
1 768 CDS
ID metaerg.pl|14821
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 9.19858; ; 4.13333; 4.65106; 0.414184;
852 4 bac_23SrRNA
ID metaerg.pl|14822
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 9.19858; ; 4.13333; 4.65106; 0.414184;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FSRB01000001.4982099.4984910 10 849 evalue:0.0 qcov:99 identity:85.881;
rRNA_taxon Bacteria;Planctomycetes;Planctomycetacia;
>Feature NODE_241372_length_850_cov_30.2742
497 2 bac_23SrRNA
ID metaerg.pl|14825
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 30.3157; 0.102857; 30.4186;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AWEP01000011.646.3519 1 484 evalue:0.0 qcov:98 identity:97.934;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Cellvibrionales;Cellvibrionaceae;Marinimicrobium;
>Feature NODE_243053_length_845_cov_37.9354
845 9 bac_23SrRNA
ID metaerg.pl|14826
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.5957; 38.0791; 64.7727; 162.311; 24.8633;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ANNU01000014.481.3365 1 837 evalue:0.0 qcov:100 identity:97.017;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;Cyclobacteriaceae;Nafulsella;
135 593 CDS
ID metaerg.pl|14827
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Cyclobacteriaceae;g__ELB16-189;s__ELB16-189 sp002345965;
genomedb_acc GCA_002345965.1;
genomedb_target db:genomedb|GCA_002345965.1|DDTF01000037.1_159 1 151 evalue:2.8e-61 qcov:99.30 identity:82.80;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 34.5957; 38.0791; 64.7727; 162.311; 24.8633;
>Feature NODE_243409_length_844_cov_15.2307
>Feature NODE_244220_length_842_cov_3.60356
1 303 CDS
ID metaerg.pl|14828
genomedb_OC d__Bacteria;p__Patescibacteria;c__ABY1;o__SG8-24;f__UBA11717;g__2-02-FULL-53-10;s__2-02-FULL-53-10 sp001791035;
genomedb_acc GCA_001791035.1;
genomedb_target db:genomedb|GCA_001791035.1|OGL70592.1 3 81 evalue:5.8e-07 qcov:79.00 identity:40.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 6.2659; ; ; 6.2659;
>Feature NODE_246249_length_836_cov_8.6402
833 3 arc_23SrRNA
ID metaerg.pl|14829
Name arc_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 11.7259; ; 11.7259; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP003929.2433274.2436186 4 830 evalue:0.0 qcov:99 identity:94.082;
rRNA_taxon Archaea;Euryarchaeota;Halobacteria;Halobacteriales;
>Feature NODE_247999_length_831_cov_4.58763
830 2 bac_23SrRNA
ID metaerg.pl|14830
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 8.18796; 21.4288; 1.01468; 32.464; 1.8326;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AMWG01000111.203208.206099 1 829 evalue:0.0 qcov:100 identity:91.361;
rRNA_taxon Bacteria;Planctomycetes;Planctomycetacia;Pirellulales;
>Feature NODE_248315_length_830_cov_6.09419
1 76 tRNA
ID metaerg.pl|14831
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.52353; ; ; 6.52353; ;
name tRNA_Ala_tgc;
387 830 bac_23SrRNA
ID metaerg.pl|14832
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.52353; ; ; 6.52353; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LYWY01000033.116214.119002 1 444 evalue:0.0 qcov:100 identity:94.820;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;
>Feature NODE_248258_length_830_cov_92.7252
165 57 bac_5SrRNA
ID metaerg.pl|14833
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 20.6147; 123.756; 14.0485; 6.56471; 82.5279;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
830 341 bac_23SrRNA
ID metaerg.pl|14834
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 20.6147; 123.756; 14.0485; 6.56471; 82.5279;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 490 evalue:0.0 qcov:100 identity:95.316;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;Nitriliruptoraceae;
>Feature NODE_249302_length_827_cov_17.7487
404 2 bac_16SrRNA
ID metaerg.pl|14837
Name bac_16SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.763663; 6.75332; 1.58641; 0.71935; 9.82275;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KF836161.1.1495 2 399 evalue:0.0 qcov:99 identity:97.236;
rRNA_taxon Bacteria;Proteobacteria;Deltaproteobacteria;Bradymonadales;Bradymonadaceae;
3 188 CDS
ID metaerg.pl|14838
genomedb_OC d__Bacteria;p__AABM5-125-24;c__AABM5-125-24;o__AABM5-125-24;f__AABM5-125-24;g__AABM5-125-24;s__AABM5-125-24 sp002127415;
genomedb_acc GCA_002127415.1;
genomedb_target db:genomedb|GCA_002127415.1|MWJR01000104.1_3 1 60 evalue:5.9e-18 qcov:98.40 identity:81.70;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.763663; 6.75332; 1.58641; 0.71935; 9.82275;
>Feature NODE_249286_length_827_cov_35.8886
3 641 CDS
ID metaerg.pl|14835
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO37830.1 1 210 evalue:1.7e-101 qcov:99.10 identity:85.20;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.6189; ; ; 36.6189; ;
825 720 bac_5SrRNA
ID metaerg.pl|14836
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 36.6189; ; ; 36.6189; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_249597_length_826_cov_63.0195
723 1 bac_23SrRNA
ID metaerg.pl|14839
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 60.9068; 0.948225; 1.86538; 58.0932;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AFPO01000022.271.3149 1 721 evalue:0.0 qcov:99 identity:94.183;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;
>Feature NODE_249933_length_825_cov_20.3753
87 162 tRNA
ID metaerg.pl|14840
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.746667; 13.7837; 0.0207407; 14.5837; 0.0325926;
name tRNA_Ala_tgc;
824 318 CDS
ID metaerg.pl|14841
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.746667; 13.7837; 0.0207407; 14.5837; 0.0325926;
510 818 bac_23SrRNA
ID metaerg.pl|14842
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.746667; 13.7837; 0.0207407; 14.5837; 0.0325926;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JRKS01000111.405.3243 1 309 evalue:1.03e-117 qcov:100 identity:91.667;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;
>Feature NODE_250645_length_823_cov_113.807
23 253 CDS
ID metaerg.pl|14843
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E sp003290225;
genomedb_acc GCA_003290225.1;
genomedb_target db:genomedb|GCA_003290225.1|CP029983.1_62 10 76 evalue:2.4e-29 qcov:88.20 identity:97.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 5.4636; 80.3328; 6.83061; 25.9034; 42.1352;
823 56 bac_16SrRNA
ID metaerg.pl|14844
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 5.4636; 80.3328; 6.83061; 25.9034; 42.1352;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|AONB01000049.48.1571 13 768 evalue:0.0 qcov:98 identity:98.016;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Nitrincolaceae;Nitrincola;
>Feature NODE_250781_length_823_cov_4.02865
1 823 bac_23SrRNA
ID metaerg.pl|14845
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 6.93908; ; 6.57652; 0.270431; 0.0936107;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_252416_length_819_cov_2.00785
1 591 CDS
ID metaerg.pl|14846
allgo_ids GO:0004519;
genomedb_OC d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA11359_A;g__2-02-FULL-46-13;s__2-02-FULL-46-13 sp001821015;
genomedb_acc GCA_001821015.1;
genomedb_target db:genomedb|GCA_001821015.1|OHA26445.1 3 176 evalue:4.6e-40 qcov:88.80 identity:48.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 4.72347; ; 4.72347; ;
pfam_acc PF03161;
pfam_desc LAGLIDADG DNA endonuclease family;
pfam_id LAGLIDADG_2;
pfam_target db:Pfam-A.hmm|PF03161.13 evalue:1.2e-18 score:67.0 best_domain_score:66.7 name:LAGLIDADG_2;
tm_num 1;
1 591 transmembrane_helix
ID metaerg.pl|14847
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 4.72347; ; 4.72347; ;
topology o91-147i;
>Feature NODE_254632_length_812_cov_116.44
811 1 bac_23SrRNA
ID metaerg.pl|14849
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 26.7085; 281.02; 79.1495; 95.2523; 79.9094;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JMIH01000045.101.2996 1 811 evalue:0.0 qcov:100 identity:94.969;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;
>Feature NODE_254667_length_812_cov_16.646
563 462 bac_5SrRNA
ID metaerg.pl|14848
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 27.1435; ; 28.0665; 0.922961;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_255343_length_810_cov_112.31
758 1 bac_16SrRNA
ID metaerg.pl|14850
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 938.561; 595.594; 121.074; 84.3227; 137.57;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JX240507.1.1452 1 754 evalue:0.0 qcov:99 identity:99.602;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Beijerinckiaceae;Salinarimonas;
1 258 CDS
ID metaerg.pl|14851
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Phyllobacterium;s__Phyllobacterium sp900473335;
genomedb_acc GCA_900473335.1;
genomedb_target db:genomedb|GCA_900473335.1|UCNP01000068.1_1 2 85 evalue:1.7e-31 qcov:98.80 identity:85.70;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 938.561; 595.594; 121.074; 84.3227; 137.57;
sp YES;
1 57 signal_peptide
ID metaerg.pl|14852
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 938.561; 595.594; 121.074; 84.3227; 137.57;
>Feature NODE_257196_length_805_cov_141.089
447 793 bac_23SrRNA
ID metaerg.pl|14853
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 10.5985; 7.21985; 238.759; 1.67328; 258.25;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FNIO01000014.2701.5630 1 347 evalue:2.61e-89 qcov:100 identity:84.000;
rRNA_taxon Bacteria;Proteobacteria;
>Feature NODE_257603_length_804_cov_6.71028
1 804 euk_28SrRNA
ID metaerg.pl|14854
Name euk_28SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 11.8089; ; ; 11.8089;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AF479118.1.3369 1 804 evalue:0.0 qcov:100 identity:100.000;
rRNA_taxon Eukaryota;Archaeplastida;Chloroplastida;Charophyta;Phragmoplastophyta;
802 14 CDS
ID metaerg.pl|14855
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 11.8089; ; ; 11.8089;
>Feature NODE_258304_length_802_cov_30.7068
2 190 CDS
ID metaerg.pl|14856
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.280675; 18.888; 0.480061; ; 19.6488;
369 802 bac_16SrRNA
ID metaerg.pl|14857
Name bac_16SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.280675; 18.888; 0.480061; ; 19.6488;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KC852996.1.1460 5 434 evalue:0.0 qcov:99 identity:98.605;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Marinobacteraceae;Marinobacter;
>Feature NODE_259444_length_799_cov_52.7903
1 799 bac_16SrRNA
ID metaerg.pl|14858
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 44.2296; 0.372881; 5.60092; 37.4484; 0.807396;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|LN851778.1.1530 1 799 evalue:0.0 qcov:100 identity:98.125;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas;
>Feature NODE_261827_length_793_cov_50.2222
1 425 bac_23SrRNA
ID metaerg.pl|14859
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 3.24883; 26.8289; 1.00311; 32.0793; 0.998445;
rRNA_target rRNA_target=db:silva_LSURef.fasta|BBUL01000055.337.3209 1 425 evalue:0.0 qcov:100 identity:97.412;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Cellvibrionales;Cellvibrionaceae;Cellvibrio;
520 792 CDS
ID metaerg.pl|14860
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Saccharospirillaceae;g__Oleispira;s__Oleispira sp002632185;
genomedb_acc GCA_002632185.1;
genomedb_target db:genomedb|GCA_002632185.1|NTLL01000012.1_55 6 73 evalue:5.0e-13 qcov:74.70 identity:58.80;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 3.24883; 26.8289; 1.00311; 32.0793; 0.998445;
578 691 bac_5SrRNA
ID metaerg.pl|14861
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 3.24883; 26.8289; 1.00311; 32.0793; 0.998445;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_262214_length_792_cov_79.7639
76 1 tRNA
ID metaerg.pl|14862
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 19.8037; 0.109034; 19.2414; ; 0.454829;
name tRNA_Ala_tgc;
260 184 tRNA
ID metaerg.pl|14863
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 19.8037; 0.109034; 19.2414; ; 0.454829;
name tRNA_Ile_gat;
507 743 CDS
ID metaerg.pl|14864
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E fluorescens_G;
genomedb_acc GCA_001878715.1;
genomedb_target db:genomedb|GCA_001878715.1|CP017951.1_940 12 78 evalue:1.5e-29 qcov:85.90 identity:97.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 19.8037; 0.109034; 19.2414; ; 0.454829;
791 546 bac_16SrRNA
ID metaerg.pl|14865
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 19.8037; 0.109034; 19.2414; ; 0.454829;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|MRUG01000023.201.1712 13 246 evalue:8.27e-120 qcov:95 identity:100.000;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Cellvibrionales;Cellvibrionaceae;uncultured;
>Feature NODE_262995_length_790_cov_37.0884
243 186 euk_5_8SrRNA
ID metaerg.pl|14866
Name euk_5_8SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.229687; 25.0281; 9.6375; 36.8359; 1.94062;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FTOM01000018.2378.5214 1 58 evalue:2.37e-21 qcov:100 identity:98.276;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter;
298 789 CDS
ID metaerg.pl|14867
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.229687; 25.0281; 9.6375; 36.8359; 1.94062;
>Feature NODE_263350_length_789_cov_47.8243
789 1 bac_16SrRNA
ID metaerg.pl|14868
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 40.0782; 1.5493; 0.549296; 42.1987; 0.0219092;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ152633.1.1500 1 789 evalue:0.0 qcov:100 identity:99.873;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;uncultured;
>Feature NODE_263410_length_789_cov_8.18801
77 178 bac_5SrRNA
ID metaerg.pl|14871
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.330203; 5.55243; 2.00626; 8.98279; 1.0939;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
354 788 CDS
ID metaerg.pl|14872
allec_ids 4.2.1.17; 1.1.1.211;
allgo_ids GO:0003824; GO:0016507; GO:0005743; GO:0042645; GO:0005739; GO:0003857; GO:0003988; GO:0004300; GO:0000062; GO:0016509; GO:0016508; GO:0051287; GO:0044877; GO:0006635; GO:0042493; GO:0032868;
allko_ids K07514; K07515; K01825; K10527; K01782; K07516; K00022; K01692; K15016;
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Psychroflexus;s__Psychroflexus tropicus;
genomedb_acc GCF_000378765.1;
genomedb_target db:genomedb|GCF_000378765.1|WP_019037912.1 1 145 evalue:9.8e-64 qcov:100.00 identity:84.80;
kegg_pathway_id 01040; 00062; 00903; 00650; 00640; 00592; 00410; 00071; 00281; 00280; 00310; 00380; 00930; 00632;
kegg_pathway_name Biosynthesis of unsaturated fatty acids; Fatty acid elongation in mitochondria; Limonene and pinene degradation; Butanoate metabolism; Propanoate metabolism; alpha-Linolenic acid metabolism; beta-Alanine metabolism; Fatty acid metabolism; Geraniol degradation; Valine, leucine and isoleucine degradation; Lysine degradation; Tryptophan metabolism; Caprolactam degradation; Benzoate degradation via CoA ligation;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.330203; 5.55243; 2.00626; 8.98279; 1.0939;
metacyc_pathway_id VALDEG-PWY; PWY-5138; P3-PWY; PWY-6435; PWY-561; PWY-5136; FAO-PWY; ILEUDEG-PWY;
metacyc_pathway_name L-valine degradation I;; unsaturated, even numbered fatty acid β-oxidation;; gallate degradation III (anaerobic);; 4-hydroxybenzoate biosynthesis III (plants);; superpathway of glyoxylate cycle and fatty acid degradation;; fatty acid β-oxidation II (peroxisome);; fatty acid β-oxidation I;; L-isoleucine degradation I;;
metacyc_pathway_type VALINE-DEG;; Fatty-Acid-Degradation;; GALLATE-DEG;; 4-Hydroxybenzoate-Biosynthesis;; Energy-Metabolism; Super-Pathways;; Fatty-Acid-Degradation;; Fatty-Acid-Degradation;; ISOLEUCINE-DEG;;
pfam_acc PF00378; PF16113;
pfam_desc Enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase;
pfam_id ECH_1; ECH_2;
pfam_target db:Pfam-A.hmm|PF00378.20 evalue:2e-25 score:88.8 best_domain_score:88.6 name:ECH_1; db:Pfam-A.hmm|PF16113.5 evalue:6.4e-19 score:67.8 best_domain_score:67.6 name:ECH_2;
sprot_desc Trifunctional enzyme subunit alpha, mitochondrial;
sprot_id sp|Q8BMS1|ECHA_MOUSE;
sprot_target db:uniprot_sprot|sp|Q8BMS1|ECHA_MOUSE 1 141 evalue:3.8e-06 qcov:97.20 identity:26.20;
>Feature NODE_263369_length_789_cov_23.0599
2 498 bac_23SrRNA
ID metaerg.pl|14869
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 115.277; 21.2958; 19.2801; 33.3865; 41.3146;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP020382.2903900.2906833 1 495 evalue:0.0 qcov:99 identity:91.717;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Rhodothermales;
582 691 bac_5SrRNA
ID metaerg.pl|14870
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 115.277; 21.2958; 19.2801; 33.3865; 41.3146;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_265273_length_784_cov_65.8601
783 2 bac_23SrRNA
ID metaerg.pl|14873
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 68.1404; 173.038; 39.4038; 295.202; 14.6199;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AONB01000044.234.2985 1 782 evalue:0.0 qcov:100 identity:93.622;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;
>Feature NODE_265695_length_783_cov_22.5591
781 494 CDS
ID metaerg.pl|14874
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.522907; 17.8768; 0.669826; 15.624; 1.06003;
tm_num 1;
781 494 transmembrane_helix
ID metaerg.pl|14875
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.522907; 17.8768; 0.669826; 15.624; 1.06003;
topology o536-595i;
>Feature NODE_265675_length_783_cov_52.2843
2 783 bac_23SrRNA
ID metaerg.pl|14876
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 13.9494; 4.28752; 10.7804; 1.09163; 30.109;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FTNE01000060.2738.5486 1 782 evalue:0.0 qcov:100 identity:88.280;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;
640 68 CDS
ID metaerg.pl|14877
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 13.9494; 4.28752; 10.7804; 1.09163; 30.109;
>Feature NODE_265742_length_783_cov_6.2033
782 2 euk_28SrRNA
ID metaerg.pl|14878
Name euk_28SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 6.28594; ; 5.9921; 0.293839; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_266867_length_780_cov_98.2552
1 249 CDS
ID metaerg.pl|14879
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.62222; 79.1857; 1.31746; 2.39048; 85.5159;
497 780 bac_16SrRNA
ID metaerg.pl|14880
Name bac_16SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.62222; 79.1857; 1.31746; 2.39048; 85.5159;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|DQ659236.1.1450 8 284 evalue:2.64e-135 qcov:98 identity:98.195;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Roseinatronobacter;
>Feature NODE_267524_length_779_cov_2.9558
779 399 CDS
ID metaerg.pl|14881
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 5.57711; ; ; 5.57711;
>Feature NODE_267696_length_778_cov_94.9101
777 1 bac_23SrRNA
ID metaerg.pl|14882
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 74.5748; 69.6959; 86.5605; 434.841; 204.01;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FMBM01000002.2213986.2217261 1 630 evalue:0.0 qcov:81 identity:97.778;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Beijerinckiaceae;Salinarimonas;
>Feature NODE_268598_length_776_cov_7.48266
519 420 bac_5SrRNA
ID metaerg.pl|14883
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 6.52236; ; 6.52236; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_269338_length_774_cov_70.42
774 2 bac_23SrRNA
ID metaerg.pl|14884
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 3.99519; 36.3141; 2.53686; 45.6458; 2.79968;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 773 evalue:0.0 qcov:100 identity:96.258;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;Nitriliruptoraceae;
586 774 CDS
ID metaerg.pl|14885
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 3.99519; 36.3141; 2.53686; 45.6458; 2.79968;
>Feature NODE_270689_length_771_cov_3.39665
770 1 bac_23SrRNA
ID metaerg.pl|14886
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 6.44928; ; ; 6.44928; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP020382.2903900.2906833 1 770 evalue:0.0 qcov:100 identity:87.918;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;
>Feature NODE_271383_length_769_cov_8.12885
2 77 tRNA
ID metaerg.pl|14887
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.18255; 0.945073; 1.65428; 12.2569; 0.47496;
name tRNA_Ala_tgc;
658 227 CDS
ID metaerg.pl|14888
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.18255; 0.945073; 1.65428; 12.2569; 0.47496;
sp YES;
227 316 lipoprotein_signal_peptide
ID metaerg.pl|14889
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 9.18255; 0.945073; 1.65428; 12.2569; 0.47496;
>Feature NODE_271998_length_768_cov_2.82889
454 2 bac_23SrRNA
ID metaerg.pl|14890
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 4.98544; ; ; 4.98544; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LADL02000907.2486.5306 1 453 evalue:0.0 qcov:100 identity:96.247;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Opitutales;Puniceicoccaceae;
731 655 tRNA
ID metaerg.pl|14891
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 4.98544; ; ; 4.98544; ;
name tRNA_Ile_gat;
>Feature NODE_272543_length_767_cov_2.32303
719 273 bac_23SrRNA
ID metaerg.pl|14892
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 4.31929; ; ; 4.31929; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
278 553 CDS
ID metaerg.pl|14893
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 4.31929; ; ; 4.31929; ;
>Feature NODE_272646_length_766_cov_7.827
253 765 bac_23SrRNA
ID metaerg.pl|14894
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 7.83279; 13.6932; 0.344156; 0.910714; 22.7808;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP003607.2198404.2201288 3 513 evalue:0.0 qcov:99 identity:98.826;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Nostocales;Oscillatoriaceae;Oscillatoria PCC-6304;
>Feature NODE_273281_length_765_cov_2.88451
1 759 bac_23SrRNA
ID metaerg.pl|14895
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.95122; ; 2.29106; 9.76748; 2.5252;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CESM01153277.1.2162 8 759 evalue:0.0 qcov:99 identity:86.207;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;
>Feature NODE_274306_length_763_cov_1.95198
499 293 CDS
ID metaerg.pl|14896
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 4.38336; ; 4.38336;
>Feature NODE_273880_length_763_cov_204.36
761 1 bac_23SrRNA
ID metaerg.pl|14897
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 321.462; 37.9054; 2.31321; 361.917; 0.236542;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FOGT01000034.2155.5096 1 761 evalue:0.0 qcov:100 identity:96.583;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;Sporolactobacillaceae;
>Feature NODE_275185_length_760_cov_49.1177
204 760 bac_23SrRNA
ID metaerg.pl|14898
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 39.8902; 0.231148; 2.53279; 36.6459; 0.480328;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JMIH01000045.101.2996 1 557 evalue:0.0 qcov:100 identity:95.871;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;Cyclobacteriaceae;
>Feature NODE_275752_length_759_cov_4.22727
1 759 bac_16SrRNA
ID metaerg.pl|14899
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.13957; 224.547; 186.406; 484.204; 67.1117;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JF727707.1.1490 1 735 evalue:0.0 qcov:97 identity:94.422;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Bacteroidales;
>Feature NODE_276080_length_758_cov_22.4751
1 758 bac_23SrRNA
ID metaerg.pl|14900
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 17.9967; ; 0.725329; 17.2714;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FNNU01000014.2560.5458 1 758 evalue:0.0 qcov:100 identity:87.418;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;
>Feature NODE_277312_length_755_cov_35.44
543 1 bac_16SrRNA
ID metaerg.pl|14901
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.48595; 39.1653; 2.7719; 29.1157; 6.79174;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JQ824975.1.1495 1 539 evalue:0.0 qcov:99 identity:96.289;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Nitrosococcales;Methylophagaceae;
>Feature NODE_278627_length_752_cov_83.132
5 752 bac_16SrRNA
ID metaerg.pl|14902
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 30.8322; 4.64784; 0.551495; 36.6462; 0.614618;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ152985.1.1487 1 748 evalue:0.0 qcov:100 identity:95.053;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Cellvibrionales;Cellvibrionaceae;
>Feature NODE_278630_length_752_cov_72.3845
360 284 tRNA
ID metaerg.pl|14903
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.244186; 0.0946844; 9.27575; 0.244186; 9.8588;
name tRNA_Ile_gat;
470 703 CDS
ID metaerg.pl|14904
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E;s__Pseudomonas_E fluorescens_G;
genomedb_acc GCA_001878715.1;
genomedb_target db:genomedb|GCA_001878715.1|CP017951.1_940 10 77 evalue:1.1e-29 qcov:88.30 identity:95.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.244186; 0.0946844; 9.27575; 0.244186; 9.8588;
751 506 bac_16SrRNA
ID metaerg.pl|14905
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.244186; 0.0946844; 9.27575; 0.244186; 9.8588;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|MRUG01000023.201.1712 13 246 evalue:8.27e-120 qcov:95 identity:100.000;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Cellvibrionales;Cellvibrionaceae;uncultured;
>Feature NODE_280051_length_749_cov_3.90346
749 1 bac_23SrRNA
ID metaerg.pl|14908
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 6.54257; ; ; 6.54257;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JMIX01000006.52179.54985 1 749 evalue:0.0 qcov:100 identity:96.262;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Sphingomonadales;Sphingomonadaceae;
>Feature NODE_279914_length_749_cov_155.251
2 749 bac_23SrRNA
ID metaerg.pl|14906
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 354.344; 30.8865; 61.5359; 214.987; 46.9349;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LFCJ01001016.13372.16203 1 748 evalue:0.0 qcov:100 identity:91.842;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;
749 264 CDS
ID metaerg.pl|14907
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 354.344; 30.8865; 61.5359; 214.987; 46.9349;
>Feature NODE_280483_length_748_cov_3.76912
471 397 tRNA
ID metaerg.pl|14911
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 9.17893; 0.359532; 0.966555; 7.13545; 0.717391;
name tRNA_His_gtg;
>Feature NODE_280343_length_748_cov_67.1342
3 254 CDS
ID metaerg.pl|14909
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_084173596.1 3 82 evalue:1.8e-30 qcov:96.40 identity:87.50;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 39.0719; 0.0785953; ; 39.1505;
746 641 bac_5SrRNA
ID metaerg.pl|14910
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 39.0719; 0.0785953; ; 39.1505;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_281200_length_746_cov_173.964
1 746 bac_16SrRNA
ID metaerg.pl|14912
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 55.1309; 113.914; 86.6393; 44.7148; 300.399;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JQ739035.1.1432 1 746 evalue:0.0 qcov:100 identity:97.855;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobaculum;
240 1 CDS
ID metaerg.pl|14913
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Pleomorphomonadaceae;g__Pleomorphomonas;s__Pleomorphomonas sp900095415;
genomedb_acc GCA_900095415.1;
genomedb_target db:genomedb|GCA_900095415.1|SCM71964.1 2 80 evalue:5.0e-09 qcov:98.80 identity:51.90;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 55.1309; 113.914; 86.6393; 44.7148; 300.399;
>Feature NODE_281204_length_746_cov_136.399
2 746 bac_16SrRNA
ID metaerg.pl|14914
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 917.955; 139.148; 564.378; 73.2383; 141.193;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ152934.1.1480 1 745 evalue:0.0 qcov:100 identity:95.856;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;Nitriliruptoraceae;
>Feature NODE_281665_length_745_cov_40.2855
4 745 bac_23SrRNA
ID metaerg.pl|14915
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 145.119; 6.10252; 48.6672; 71.5899; 18.7597;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CEPC01001690.1.2431 4 742 evalue:0.0 qcov:99 identity:87.366;
rRNA_taxon Bacteria;Gemmatimonadetes;Gemmatimonadetes;
>Feature NODE_282996_length_742_cov_25.0626
330 139 CDS
ID metaerg.pl|14918
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Halomonas;s__Halomonas sp003031405;
genomedb_acc GCF_003031405.1;
genomedb_target db:genomedb|GCF_003031405.1|WP_078088845.1 2 63 evalue:4.3e-16 qcov:98.40 identity:77.40;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 19.598; ; ; 19.598;
sp YES;
139 213 lipoprotein_signal_peptide
ID metaerg.pl|14919
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 19.598; ; ; 19.598;
695 582 bac_5SrRNA
ID metaerg.pl|14920
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 19.598; ; ; 19.598;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CVKH01000045.4542.7021 12 91 evalue:7.97e-25 qcov:70 identity:92.500;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Enterobacteriales;
>Feature NODE_283335_length_742_cov_2.34498
198 619 euk_28SrRNA
ID metaerg.pl|14916
Name euk_28SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.248311; ; 4.6098; ; 4.85811;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
500 742 CDS
ID metaerg.pl|14917
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.248311; ; 4.6098; ; 4.85811;
>Feature NODE_283405_length_741_cov_62.2172
3 254 CDS
ID metaerg.pl|14921
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea tenue;
genomedb_acc GCF_001904775.1;
genomedb_target db:genomedb|GCF_001904775.1|WP_084173596.1 3 83 evalue:2.2e-31 qcov:97.60 identity:88.90;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 31.934; ; 31.2267; 0.707276;
739 634 bac_5SrRNA
ID metaerg.pl|14922
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 31.934; ; 31.2267; 0.707276;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_283816_length_740_cov_156.939
1 740 bac_23SrRNA
ID metaerg.pl|14923
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 61.4102; 230.124; 35.3678; 353.91; 27.0085;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LFCJ01001016.13372.16203 1 740 evalue:0.0 qcov:100 identity:91.733;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;
740 255 CDS
ID metaerg.pl|14924
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 61.4102; 230.124; 35.3678; 353.91; 27.0085;
>Feature NODE_284727_length_738_cov_15.2958
293 3 CDS
ID metaerg.pl|14925
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.1854; 3.18707; 68.8146; 49.4422;
470 357 bac_5SrRNA
ID metaerg.pl|14926
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 16.1854; 3.18707; 68.8146; 49.4422;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_285696_length_736_cov_9.35242
259 735 CDS
ID metaerg.pl|14927
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 1.01706; 6.18259; ; 7.45051; 0.250853;
>Feature NODE_286094_length_735_cov_181.381
2 397 bac_23SrRNA
ID metaerg.pl|14928
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 700.398; 33.3983; 593.436; 29.4085; 44.1556;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MEHS01000004.201703.204603 1 396 evalue:0.0 qcov:100 identity:99.495;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobaca;
266 3 CDS
ID metaerg.pl|14929
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Bin36;s__Bin36 sp002239085;
genomedb_acc GCA_002239085.1;
genomedb_target db:genomedb|GCA_002239085.1|MPNP01000003.1_19 1 88 evalue:1.1e-38 qcov:100.00 identity:93.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 700.398; 33.3983; 593.436; 29.4085; 44.1556;
541 653 bac_5SrRNA
ID metaerg.pl|14930
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 700.398; 33.3983; 593.436; 29.4085; 44.1556;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_289379_length_728_cov_17.7073
1 480 bac_23SrRNA
ID metaerg.pl|14931
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.5346; 26.7543; 22.0121; 80.7682; 20.4671;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ATVH01000016.264784.267709 1 478 evalue:9.24e-165 qcov:99 identity:88.727;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;
728 444 CDS
ID metaerg.pl|14932
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.5346; 26.7543; 22.0121; 80.7682; 20.4671;
>Feature NODE_290277_length_727_cov_1.89732
727 26 bac_23SrRNA
ID metaerg.pl|14933
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 108.823; 23.9237; 4.56672; 52.0641; 28.2686;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP003282.2957371.2960352 7 702 evalue:0.0 qcov:99 identity:89.112;
rRNA_taxon Bacteria;Spirochaetes;Spirochaetia;
>Feature NODE_290756_length_725_cov_29.3821
3 108 bac_5SrRNA
ID metaerg.pl|14934
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 37.2243; ; 37.2243; ; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
188 3 CDS
ID metaerg.pl|14935
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 37.2243; ; 37.2243; ; ;
210 707 CDS
ID metaerg.pl|14936
allgo_ids GO:0002949; GO:0005737; GO:0005524; GO:0046872;
allko_ids K06925;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Phormidesmiales;f__Phormidesmiaceae;g__Nodosilinea;s__Nodosilinea antarctica;
genomedb_acc GCA_003241845.1;
genomedb_target db:genomedb|GCA_003241845.1|PZO45384.1 1 165 evalue:7.0e-74 qcov:100.00 identity:88.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 37.2243; ; 37.2243; ; ;
pfam_acc PF02367;
pfam_desc Threonylcarbamoyl adenosine biosynthesis protein TsaE;
pfam_id TsaE;
pfam_target db:Pfam-A.hmm|PF02367.17 evalue:3.4e-32 score:110.3 best_domain_score:110.0 name:TsaE;
sprot_desc tRNA threonylcarbamoyladenosine biosynthesis protein TsaE;
sprot_id sp|O52749|TSAE_NOSS1;
sprot_target db:uniprot_sprot|sp|O52749|TSAE_NOSS1 10 138 evalue:6.2e-37 qcov:78.20 identity:59.70;
tigrfam_acc TIGR00150;
tigrfam_desc tRNA threonylcarbamoyl adenosine modification protein YjeE;
tigrfam_mainrole Protein synthesis;
tigrfam_name T6A_YjeE;
tigrfam_sub1role tRNA and rRNA base modification;
tigrfam_target db:TIGRFAMs.hmm|TIGR00150 evalue:1.3e-34 score:118.1 best_domain_score:117.7 name:TIGR00150;
>Feature NODE_292068_length_722_cov_167.055
722 1 bac_23SrRNA
ID metaerg.pl|14937
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 265.675; 753.825; 158.428; 1266.7; 88.7745;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MRCG01000040.2239.5124 1 722 evalue:0.0 qcov:100 identity:97.368;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Phormidesmiales;Nodosilineaceae;Nodosilinea PCC-7104;
>Feature NODE_292618_length_721_cov_6.98498
349 1 bac_16SrRNA
ID metaerg.pl|14938
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.4571; 4.31699; 10.676; 0.688266; 4.77758;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JN178074.1.1560 1 344 evalue:4.27e-134 qcov:99 identity:91.884;
rRNA_taxon Bacteria;Gemmatimonadetes;BD2-11 terrestrial group;
1 372 CDS
ID metaerg.pl|14939
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Microtrichales;f__MedAcidi-G1;g__S20-B6;s__S20-B6 sp002329075;
genomedb_acc GCA_002329075.1;
genomedb_target db:genomedb|GCA_002329075.1|DCXR01000053.1_92 12 117 evalue:2.7e-22 qcov:86.20 identity:59.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.4571; 4.31699; 10.676; 0.688266; 4.77758;
>Feature NODE_293118_length_720_cov_5.47218
720 1 bac_23SrRNA
ID metaerg.pl|14940
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 11.7807; 1.27193; 9.50702; 1.00175; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AACY020088747.1.2351 7 720 evalue:0.0 qcov:99 identity:87.414;
rRNA_taxon Bacteria;Actinobacteria;Acidimicrobiia;
477 719 CDS
ID metaerg.pl|14941
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Propionibacteriales;f__Nocardioidaceae;g__Nocardioides_A;s__Nocardioides_A massiliensis;
genomedb_acc GCA_900067705.1;
genomedb_target db:genomedb|GCA_900067705.1|CCXJ01000100.1_8 11 81 evalue:1.1e-11 qcov:87.70 identity:59.20;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 11.7807; 1.27193; 9.50702; 1.00175; ;
>Feature NODE_293571_length_719_cov_7.8012
719 273 CDS
ID metaerg.pl|14942
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 6.61511; ; ; 6.61511; ;
619 506 bac_5SrRNA
ID metaerg.pl|14943
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 6.61511; ; ; 6.61511; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_293499_length_719_cov_100.122
718 2 bac_23SrRNA
ID metaerg.pl|14944
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 18.5272; 40.2953; 19.5835; 93.7786; 15.3726;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LRRR01000059.2416.5243 1 717 evalue:0.0 qcov:100 identity:93.185;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;
>Feature NODE_294058_length_718_cov_8.7813
718 4 bac_23SrRNA
ID metaerg.pl|14945
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 209.868; 110.657; 11.9437; 0.0228873; 87.2465;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AACY020310651.127.2997 1 715 evalue:0.0 qcov:100 identity:88.162;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;
>Feature NODE_296874_length_712_cov_143.479
696 1 bac_16SrRNA
ID metaerg.pl|14946
Name bac_16SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 14.5872; 59.9964; 20.2794; 111.304; 16.4413;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JN825344.1.1352 1 693 evalue:0.0 qcov:99 identity:96.970;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;
>Feature NODE_297406_length_711_cov_23.0259
337 1 bac_16SrRNA
ID metaerg.pl|14947
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 35.1515; 1.32442; ; 36.4759; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KC758945.1.1404 1 333 evalue:1.09e-164 qcov:99 identity:98.198;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Xanthomonadales;Xanthomonadaceae;Lysobacter;
435 710 CDS
ID metaerg.pl|14948
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 35.1515; 1.32442; ; 36.4759; ;
>Feature NODE_297387_length_711_cov_56.3628
1 73 tRNA
ID metaerg.pl|14949
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 82.7291; 3.10339; 4.9697; 72.0767; 2.57932;
name tRNA_Ala_tgc;
441 537 euk_5_8SrRNA
ID metaerg.pl|14950
Name euk_5_8SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 82.7291; 3.10339; 4.9697; 72.0767; 2.57932;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FTOM01000018.2378.5214 1 97 evalue:4.88e-41 qcov:100 identity:97.938;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobacter;
>Feature NODE_298847_length_708_cov_74.7749
707 396 CDS
ID metaerg.pl|14951
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 84.4086; 1.00896; 5.1595; 76.9516; 1.28853;
>Feature NODE_299930_length_706_cov_55.3794
7 706 bac_16SrRNA
ID metaerg.pl|14952
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 79.268; 314.209; 137.25; 64.768; 32.9227;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ152978.1.1490 3 689 evalue:0.0 qcov:98 identity:94.767;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Balneolales;
>Feature NODE_300965_length_704_cov_84.0986
2 692 bac_23SrRNA
ID metaerg.pl|14953
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 11.7599; 93.8682; 9.36101; 68.0415; 4.70578;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 691 evalue:0.0 qcov:100 identity:89.466;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;
704 519 CDS
ID metaerg.pl|14954
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 11.7599; 93.8682; 9.36101; 68.0415; 4.70578;
>Feature NODE_300959_length_704_cov_183.273
704 14 bac_16SrRNA
ID metaerg.pl|14955
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 899.144; 517.661; 739.347; 573.661; 2729.81;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|DQ181691.1.1465 14 691 evalue:0.0 qcov:98 identity:97.345;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Phormidesmiales;Nodosilineaceae;Nodosilinea PCC-7104;
>Feature NODE_301976_length_702_cov_14.3107
1 479 bac_23SrRNA
ID metaerg.pl|14956
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 8.45652; 232.406; 3.31522; 23.2518; 197.382;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JQMZ01000001.2345550.2348321 1 478 evalue:0.0 qcov:99 identity:97.908;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Caulobacterales;Hyphomonadaceae;Oceanicaulis;
569 678 bac_5SrRNA
ID metaerg.pl|14957
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 8.45652; 232.406; 3.31522; 23.2518; 197.382;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_302523_length_701_cov_6.82353
700 1 arc_23SrRNA
ID metaerg.pl|14958
Name arc_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.0980036; 9.52269; ; ; 9.62069;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LTAZ01000003.276097.279004 1 700 evalue:0.0 qcov:100 identity:97.143;
rRNA_taxon Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halococcaceae;Halalkalicoccus;
>Feature NODE_304033_length_698_cov_142.813
682 1 bac_16SrRNA
ID metaerg.pl|14959
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 105.712; 14.0182; 58.7974; 11.0712; 21.8248;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KF836191.1.1444 1 682 evalue:0.0 qcov:100 identity:97.368;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;uncultured;
>Feature NODE_307101_length_692_cov_11.6374
3 260 CDS
ID metaerg.pl|14960
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__RC9;s__RC9 sp002451795;
genomedb_acc GCA_002451795.1;
genomedb_target db:genomedb|GCA_002451795.1|DKDJ01000009.1_241 2 85 evalue:8.4e-31 qcov:98.80 identity:81.00;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7546; 4.43173; 4.73801; 24.5148; 3.59225;
tm_num 1;
3 260 transmembrane_helix
ID metaerg.pl|14961
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7546; 4.43173; 4.73801; 24.5148; 3.59225;
topology i138-191o;
692 5 bac_23SrRNA
ID metaerg.pl|14962
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.7546; 4.43173; 4.73801; 24.5148; 3.59225;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LSZQ01000061.6856.9764 1 688 evalue:0.0 qcov:100 identity:90.304;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Opitutales;
>Feature NODE_307771_length_691_cov_3.33019
402 331 tRNA
ID metaerg.pl|14963
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 7.18115; 2.9464; ; 10.1275;
name tRNA_Ala_tgc;
586 511 tRNA
ID metaerg.pl|14964
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 7.18115; 2.9464; ; 10.1275;
name tRNA_Ile_gat;
>Feature NODE_309104_length_688_cov_220.526
683 1 bac_16SrRNA
ID metaerg.pl|14965
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 34.6859; 29.6933; 242.346; 31.1859; 337.911;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|DQ815147.1.1399 1 683 evalue:0.0 qcov:100 identity:98.097;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Paracoccus;
>Feature NODE_309117_length_688_cov_62.831
148 256 bac_5SrRNA
ID metaerg.pl|14966
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.54461; 3.79926; 56.2007; 0.490706; 61.0353;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
354 686 CDS
ID metaerg.pl|14967
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Nitriliruptorales;f__Nitriliruptoraceae;g__Nitriliruptor;s__Nitriliruptor alkaliphilus;
genomedb_acc GCF_000969705.1;
genomedb_target db:genomedb|GCF_000969705.1|WP_052667408.1 3 111 evalue:6.3e-10 qcov:98.20 identity:43.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.54461; 3.79926; 56.2007; 0.490706; 61.0353;
>Feature NODE_309759_length_687_cov_5.99525
184 90 bac_5SrRNA
ID metaerg.pl|14968
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 4.6797; ; 4.6797;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
475 378 bac_5SrRNA
ID metaerg.pl|14969
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 4.6797; ; 4.6797;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_310724_length_685_cov_214.008
5 685 bac_16SrRNA
ID metaerg.pl|14970
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 188.804; 20.1757; 18.7981; 242.493; 14.7159;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|DQ659237.1.1451 1 681 evalue:0.0 qcov:100 identity:97.797;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobaca;
>Feature NODE_312879_length_681_cov_42.8626
678 1 bac_23SrRNA
ID metaerg.pl|14972
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.19586; 0.19209; 10.064; 2.40113; 13.8531;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LFIK01006839.6481.9125 1 678 evalue:0.0 qcov:100 identity:95.723;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Opitutales;
2 220 CDS
ID metaerg.pl|14973
genomedb_OC d__Bacteria;p__Patescibacteria;c__Gracilibacteria;o__BD1-5;f__UBA6164;g__UBA5194;s__UBA5194 sp002412935;
genomedb_acc GCA_002412935.1;
genomedb_target db:genomedb|GCA_002412935.1|DHWA01000013.1_126 1 67 evalue:1.0e-21 qcov:93.10 identity:76.10;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1.19586; 0.19209; 10.064; 2.40113; 13.8531;
>Feature NODE_312860_length_681_cov_167.88
1 681 bac_23SrRNA
ID metaerg.pl|14971
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.913371; 52.2976; 436.288; 0.870057; 490.369;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FOGT01000034.2155.5096 1 681 evalue:0.0 qcov:100 identity:96.188;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;Sporolactobacillaceae;
>Feature NODE_313422_length_680_cov_159.858
2 397 bac_23SrRNA
ID metaerg.pl|14974
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 407.013; 25.2113; 30.8415; 493.136; 30.0698;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MEHS01000004.201703.204603 1 396 evalue:0.0 qcov:100 identity:99.495;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobaca;
266 3 CDS
ID metaerg.pl|14975
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Bin36;s__Bin36 sp002239085;
genomedb_acc GCA_002239085.1;
genomedb_target db:genomedb|GCA_002239085.1|MPNP01000003.1_19 1 88 evalue:1.1e-38 qcov:100.00 identity:93.20;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 407.013; 25.2113; 30.8415; 493.136; 30.0698;
496 608 bac_5SrRNA
ID metaerg.pl|14976
Name bac_5SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 407.013; 25.2113; 30.8415; 493.136; 30.0698;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_313960_length_679_cov_141.135
2 679 bac_23SrRNA
ID metaerg.pl|14977
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 3.32892; 68.6597; 9.68998; 2.38941; 84.0681;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AWEP01000011.646.3519 1 678 evalue:0.0 qcov:100 identity:98.230;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Cellvibrionales;Cellvibrionaceae;Marinimicrobium;
>Feature NODE_315049_length_677_cov_62.8215
>Feature NODE_317298_length_673_cov_40.9984
672 2 bac_23SrRNA
ID metaerg.pl|14978
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.472275; ; 17.8394; ; 18.3117;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 671 evalue:0.0 qcov:100 identity:86.519;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;
>Feature NODE_317845_length_672_cov_40.0924
2 671 bac_23SrRNA
ID metaerg.pl|14979
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 20.3716; 0.871648; 18.9866; 0.101533; 0.411877;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_318985_length_670_cov_38.8927
1 669 bac_23SrRNA
ID metaerg.pl|14980
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 26.7077; 114.635; 27.4654; 47.3404; 13.1212;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FUFK010014110.45.2456 1 669 evalue:0.0 qcov:100 identity:95.067;
rRNA_taxon Bacteria;Actinobacteria;Acidimicrobiia;Microtrichales;Ilumatobacteraceae;
>Feature NODE_323206_length_663_cov_3.20888
624 10 bac_23SrRNA
ID metaerg.pl|14981
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 13.77; ; 6.61209; 4.7115; 2.44639;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP003364.4643716.4646513 2 596 evalue:0.0 qcov:97 identity:87.874;
rRNA_taxon Bacteria;Planctomycetes;Planctomycetacia;
>Feature NODE_322993_length_663_cov_16.3191
1 663 bac_23SrRNA
ID metaerg.pl|14982
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 17.1579; ; ; 17.1579; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FOYW01000006.69.2966 1 663 evalue:0.0 qcov:100 identity:97.134;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Marinobacteraceae;Marinobacter;
>Feature NODE_325873_length_658_cov_21.864
213 443 CDS
ID metaerg.pl|14983
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 22.6083; 2.01378; 0.464567; 18.7953; 1.33465;
658 422 CDS
ID metaerg.pl|14984
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 22.6083; 2.01378; 0.464567; 18.7953; 1.33465;
>Feature NODE_326970_length_657_cov_2.37542
443 367 tRNA
ID metaerg.pl|14985
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 3.87771; 2.33925; 0.0907298; 6.74359; 0.435897;
name tRNA_Ile_gat;
>Feature NODE_327169_length_656_cov_5.61065
1 471 bac_16SrRNA
ID metaerg.pl|14989
Name bac_16SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.288538; 10.0138; ; 0.0652174; 10.3676;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ152629.1.1480 1 461 evalue:0.0 qcov:98 identity:95.879;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Rhodothermales;Rhodothermaceae;
>Feature NODE_327125_length_656_cov_17
1 651 arc_16SrRNA
ID metaerg.pl|14988
Name arc_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 10.8913; ; 10.8913; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JF449426.1.1481 1 641 evalue:0.0 qcov:98 identity:96.734;
rRNA_taxon Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halococcaceae;
>Feature NODE_327091_length_656_cov_138.017
2 427 CDS
ID metaerg.pl|14986
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 43.1265; 1.00395; 0.146245; 41.9763;
558 483 tRNA
ID metaerg.pl|14987
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 43.1265; 1.00395; 0.146245; 41.9763;
name tRNA_Ala_tgc;
>Feature NODE_328898_length_653_cov_15.3428
327 2 bac_16SrRNA
ID metaerg.pl|14990
Name bac_16SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 26.493; 0.487078; 5.12525; 32.6024; 0.497018;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|GQ441326.1.1452 1 322 evalue:1.36e-168 qcov:99 identity:100.000;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Nostocales;Oscillatoriaceae;Oscillatoria PCC-6304;
>Feature NODE_330079_length_651_cov_20.1896
646 2 bac_23SrRNA
ID metaerg.pl|14993
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 0.291417; 16.024; 2.98004; ; 19.2954;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP002394.103502.106432 2 644 evalue:0.0 qcov:99 identity:94.401;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;
>Feature NODE_330038_length_651_cov_123.592
651 1 bac_23SrRNA
ID metaerg.pl|14991
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 45.3992; 107.8; 179.818; 427.311; 94.2934;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MDWE01000072.224.3233 1 651 evalue:0.0 qcov:100 identity:95.448;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Balneolales;Balneolaceae;
1 237 CDS
ID metaerg.pl|14992
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 45.3992; 107.8; 179.818; 427.311; 94.2934;
>Feature NODE_332423_length_647_cov_227.4
1 647 bac_16SrRNA
ID metaerg.pl|14994
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 14.6781; 18.1006; 223.087; 12.1469; 268.012;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|MEHS01000004.844163.845607 1 647 evalue:0.0 qcov:100 identity:98.300;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Rhodobaca;
>Feature NODE_333657_length_645_cov_190.325
645 1 bac_16SrRNA
ID metaerg.pl|14997
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 32.3071; 53.1273; 58.3899; 13.7879; 157.612;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JQ739134.1.1330 1 645 evalue:0.0 qcov:100 identity:97.674;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Halodurantibacterium;
>Feature NODE_333735_length_645_cov_6.62542
645 1 bac_23SrRNA
ID metaerg.pl|14995
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.2222; ; ; 11.2222; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FOWN01000062.102.2968 1 645 evalue:0.0 qcov:100 identity:95.194;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;Bacillaceae;
643 455 CDS
ID metaerg.pl|14996
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 11.2222; ; ; 11.2222; ;
>Feature NODE_334370_length_644_cov_10.927
2 568 CDS
ID metaerg.pl|14998
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.5142; 0.297571; 0.0708502; 11.6781; 0.467611;
231 119 bac_5SrRNA
ID metaerg.pl|14999
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 12.5142; 0.297571; 0.0708502; 11.6781; 0.467611;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_334969_length_643_cov_15.4745
1 273 bac_23SrRNA
ID metaerg.pl|15000
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 118.282; 62.9675; 24.568; 47.4381; 253.256;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AATN01002113.1.1924 1 273 evalue:7.38e-74 qcov:100 identity:86.081;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;
483 590 bac_5SrRNA
ID metaerg.pl|15001
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 118.282; 62.9675; 24.568; 47.4381; 253.256;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_339261_length_636_cov_17.1721
229 636 bac_16SrRNA
ID metaerg.pl|15002
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 16.035; ; 14.4259; 1.60905;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|GU437578.1.1542 6 408 evalue:0.0 qcov:99 identity:96.774;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;Sporolactobacillaceae;
>Feature NODE_339519_length_636_cov_3.12048
1 435 euk_28SrRNA
ID metaerg.pl|15003
Name euk_28SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 6.04115; ; ; 6.04115;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ATLS01000490.3184.6867 1 435 evalue:0.0 qcov:100 identity:98.621;
rRNA_taxon Eukaryota;Opisthokonta;Nucletmycea;Fungi;Dikarya;Ascomycota;
>Feature NODE_339851_length_635_cov_92.4776
635 1 bac_23SrRNA
ID metaerg.pl|15004
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 109.338; 57.9918; 214.241; 520.233; 138.662;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP012154.242765.245645 1 635 evalue:0.0 qcov:100 identity:95.440;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Gammaproteobacteria Incertae Sedis;Unknown Family;
>Feature NODE_341808_length_632_cov_114.539
1 631 bac_23SrRNA
ID metaerg.pl|15005
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 258.322; 15.8402; 198.929; 5.51452; 38.0373;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LRRR01000059.2416.5243 1 628 evalue:0.0 qcov:99 identity:91.167;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;
>Feature NODE_342593_length_631_cov_4.39063
389 501 bac_5SrRNA
ID metaerg.pl|15006
Name bac_5SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.463617; ; 5.60707; 2.43451; 8.5052;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_344084_length_629_cov_2.89373
>Feature NODE_343736_length_629_cov_63.9895
>Feature NODE_345088_length_627_cov_31.6818
2 627 bac_23SrRNA
ID metaerg.pl|15008
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 13.7631; 29.0042; 1.19287; 46.5241; 2.56394;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CEVN01115676.1833.5057 1 626 evalue:0.0 qcov:100 identity:87.480;
rRNA_taxon Bacteria;Patescibacteria;Parcubacteria;
>Feature NODE_345078_length_627_cov_53.2115
1 625 bac_23SrRNA
ID metaerg.pl|15007
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.348008; 60.5325; 2.29979; 51.3585; 6.52621;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LT629787.32365.35259 1 624 evalue:0.0 qcov:99 identity:98.558;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Pseudomonadales;Pseudomonadaceae;Pseudomonas;
>Feature NODE_347828_length_623_cov_7.16197
133 21 bac_5SrRNA
ID metaerg.pl|15009
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 22.6469; 10; 2.11416; 10.5349;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
623 321 bac_23SrRNA
ID metaerg.pl|15010
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 22.6469; 10; 2.11416; 10.5349;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LADL02000502.14820.17545 3 303 evalue:2.81e-113 qcov:99 identity:91.362;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;uncultured;
>Feature NODE_348412_length_622_cov_58.0847
1 620 bac_16SrRNA
ID metaerg.pl|15011
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 4.10805; 98.3114; 7.00424; 70.286; 16.9131;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KJ782429.1.1448 1 569 evalue:0.0 qcov:92 identity:98.067;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Flavobacteriales;Flavobacteriaceae;Psychroflexus;
622 413 CDS
ID metaerg.pl|15012
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter;s__Pedobacter zeaxanthinifaciens;
genomedb_acc GCA_003313335.1;
genomedb_target db:genomedb|GCA_003313335.1|QMHP01000002.1_1 1 69 evalue:1.2e-27 qcov:100.00 identity:87.00;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 4.10805; 98.3114; 7.00424; 70.286; 16.9131;
>Feature NODE_349154_length_621_cov_30.4947
1 620 bac_23SrRNA
ID metaerg.pl|15013
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 21.7898; 0.191083; 1.43949; 18.5839; 1.57537;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JAGF01000001.4094467.4097563 1 620 evalue:0.0 qcov:100 identity:99.355;
rRNA_taxon Bacteria;Actinobacteria;Actinobacteria;Micrococcales;Cellulomonadaceae;Actinotalea;
>Feature NODE_350913_length_619_cov_2.8617
>Feature NODE_351890_length_617_cov_56.952
425 483 euk_5_8SrRNA
ID metaerg.pl|15014
Name euk_5_8SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 23.6681; 1.95075; 11.4026; 44.6767; 7.65525;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LWGR01000013.598898.602033 1 57 evalue:4.08e-19 qcov:97 identity:96.491;
rRNA_taxon Bacteria;Actinobacteria;Actinobacteria;Corynebacteriales;Nocardiaceae;
>Feature NODE_352679_length_616_cov_6.54724
83 27 euk_5_8SrRNA
ID metaerg.pl|15016
Name euk_5_8SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 9.24678; ; 9.24678; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AOHV01000046.33520.36428 1 57 evalue:8.28e-21 qcov:100 identity:98.246;
rRNA_taxon Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halococcaceae;Halalkalicoccus;
449 378 tRNA
ID metaerg.pl|15017
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 9.24678; ; 9.24678; ;
name tRNA_Ala_tgc;
>Feature NODE_352629_length_616_cov_10.9537
1 616 bac_23SrRNA
ID metaerg.pl|15018
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 7.40558; 69.2811; 19.9421; 12.4614; 29.4721;
rRNA_target rRNA_target=db:silva_LSURef.fasta|EU686600.38819.41786 1 616 evalue:0.0 qcov:100 identity:90.097;
rRNA_taxon Bacteria;Kiritimatiellaeota;Kiritimatiellae;
237 1 CDS
ID metaerg.pl|15019
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Pedobacter;s__Pedobacter zeaxanthinifaciens;
genomedb_acc GCA_003313335.1;
genomedb_target db:genomedb|GCA_003313335.1|QMHP01000002.1_4 1 79 evalue:6.2e-20 qcov:100.00 identity:65.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 7.40558; 69.2811; 19.9421; 12.4614; 29.4721;
>Feature NODE_352561_length_616_cov_74.1515
1 616 bac_23SrRNA
ID metaerg.pl|15015
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 59.3627; ; 54.2554; 5.1073;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AFPO01000022.271.3149 1 616 evalue:0.0 qcov:100 identity:95.477;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Idiomarinaceae;
>Feature NODE_353975_length_614_cov_158.007
402 1 CDS
ID metaerg.pl|15020
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 55.8233; 225.996; 71.9957; 75.847; 22.3297;
401 459 euk_5_8SrRNA
ID metaerg.pl|15021
Name euk_5_8SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 55.8233; 225.996; 71.9957; 75.847; 22.3297;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 59 evalue:3.16e-20 qcov:100 identity:96.610;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;Nitriliruptoraceae;
>Feature NODE_354911_length_613_cov_3.31362
612 1 euk_18SrRNA
ID metaerg.pl|15022
Name euk_18SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 6.45572; ; 0.829374; 5.62635; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|M98050.1.2114 1 612 evalue:0.0 qcov:100 identity:95.440;
rRNA_taxon Eukaryota;Excavata;Discoba;Discicristata;Heterolobosea;
611 393 CDS
ID metaerg.pl|15023
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 6.45572; ; 0.829374; 5.62635; ;
>Feature NODE_355326_length_612_cov_186.654
612 6 bac_23SrRNA
ID metaerg.pl|15024
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 445.844; 102.455; 132.468; 60.0714; 150.851;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LATF01000007.664884.667942 1 607 evalue:0.0 qcov:100 identity:91.776;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;
319 612 CDS
ID metaerg.pl|15025
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 445.844; 102.455; 132.468; 60.0714; 150.851;
>Feature NODE_356134_length_611_cov_14.0665
1 611 bac_23SrRNA
ID metaerg.pl|15026
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 70.1323; 19.0781; 8.38178; 11.8308; 30.8416;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MDWE01000072.224.3233 1 611 evalue:0.0 qcov:100 identity:94.652;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Balneolales;
>Feature NODE_356769_length_610_cov_158.924
2 610 bac_23SrRNA
ID metaerg.pl|15027
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 32.7957; 39.4587; 23.5935; 114.348; 18.5022;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP019046.387835.390734 1 609 evalue:0.0 qcov:100 identity:93.290;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Cellvibrionales;
>Feature NODE_358889_length_607_cov_24.3551
607 1 euk_18SrRNA
ID metaerg.pl|15028
Name euk_18SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.96937; 46.8359; ; 20.2823; 24.5842;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|AY731083.1.1802 1 607 evalue:0.0 qcov:100 identity:97.209;
rRNA_taxon Eukaryota;Archaeplastida;Chloroplastida;Chlorophyta;Chlorophyceae;
455 183 CDS
ID metaerg.pl|15029
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.96937; 46.8359; ; 20.2823; 24.5842;
tm_num 1;
455 183 transmembrane_helix
ID metaerg.pl|15030
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.96937; 46.8359; ; 20.2823; 24.5842;
topology i219-278o;
>Feature NODE_358864_length_607_cov_50.5906
606 1 bac_23SrRNA
ID metaerg.pl|15031
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 22.2976; 115.289; 25.0219; 57.9869; 9.98249;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CEPL01084887.2.2609 6 606 evalue:0.0 qcov:99 identity:91.348;
rRNA_taxon Bacteria;Actinobacteria;Acidimicrobiia;Microtrichales;
3 605 CDS
ID metaerg.pl|15032
genomedb_OC d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Opitutales;f__Verruco-01;g__Verruco-01;s__Verruco-01 sp001604565;
genomedb_acc GCA_001604565.1;
genomedb_target db:genomedb|GCA_001604565.1|LVBV01000057.1_1 8 201 evalue:8.7e-18 qcov:96.50 identity:40.20;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 22.2976; 115.289; 25.0219; 57.9869; 9.98249;
>Feature NODE_359518_length_606_cov_121.691
2 605 bac_23SrRNA
ID metaerg.pl|15036
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 72.1228; 549.081; 97.3947; 290.373; 89.1908;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FBYC01000004.2628371.2631035 1 604 evalue:0.0 qcov:100 identity:92.282;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;
>Feature NODE_359517_length_606_cov_126.229
475 221 CDS
ID metaerg.pl|15033
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 201.629; 6.41228; 5.71491; 172.971; 16.5307;
sp YES;
tm_num 1;
221 277 lipoprotein_signal_peptide
ID metaerg.pl|15034
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 201.629; 6.41228; 5.71491; 172.971; 16.5307;
475 221 transmembrane_helix
ID metaerg.pl|15035
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 201.629; 6.41228; 5.71491; 172.971; 16.5307;
topology o362-430i;
>Feature NODE_360936_length_604_cov_114.035
590 1 bac_23SrRNA
ID metaerg.pl|15037
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 419.716; 101.789; 102.443; 55.3282; 160.156;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP012154.242765.245645 1 590 evalue:0.0 qcov:100 identity:93.412;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Gammaproteobacteria Incertae Sedis;
>Feature NODE_362327_length_602_cov_85.574
602 1 bac_23SrRNA
ID metaerg.pl|15038
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 447.982; 88.6438; 170.237; 799.29; 92.427;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MEHS01000004.201703.204603 1 602 evalue:0.0 qcov:100 identity:96.844;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;
>Feature NODE_363979_length_600_cov_4.04954
600 4 bac_16SrRNA
ID metaerg.pl|15039
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 4.44667; ; 4.44667; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JQ428009.1.1490 1 569 evalue:0.0 qcov:95 identity:92.443;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Rhodothermales;
>Feature NODE_364540_length_599_cov_71.7684
599 189 bac_23SrRNA
ID metaerg.pl|15041
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 593.114; 52.9755; 390.274; 60.1336; 89.7305;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MJAP01000025.459.3262 1 411 evalue:0.0 qcov:100 identity:97.324;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;Natronohydrobacter;
>Feature NODE_364604_length_599_cov_13.0551
594 1 bac_16SrRNA
ID metaerg.pl|15040
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 3.63474; 40.2784; 8.67483; 13.9688; 14;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FLMP01000812.4893.6428 1 590 evalue:0.0 qcov:99 identity:93.729;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Opitutales;
>Feature NODE_366890_length_596_cov_128.621
595 197 bac_16SrRNA
ID metaerg.pl|15042
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.982063; 32.9238; 1.29821; 1.91928; 28.7242;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ764788.1.1538 13 399 evalue:0.0 qcov:97 identity:97.158;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Idiomarinaceae;Aliidiomarina;
595 296 CDS
ID metaerg.pl|15043
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia dysenteriae;
genomedb_acc GCA_002949675.1;
genomedb_target db:genomedb|GCA_002949675.1|CP026774.1_2006 17 98 evalue:1.8e-32 qcov:82.80 identity:87.80;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.982063; 32.9238; 1.29821; 1.91928; 28.7242;
>Feature NODE_372224_length_589_cov_11.7097
1 399 CDS
ID metaerg.pl|15044
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 11.6925; 28.4579; 11.6834; 5.11845; 56.9522;
589 197 bac_23SrRNA
ID metaerg.pl|15045
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 11.6925; 28.4579; 11.6834; 5.11845; 56.9522;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CETF01022626.1369.4246 18 393 evalue:4.53e-157 qcov:96 identity:93.386;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Balneolales;
>Feature NODE_372965_length_588_cov_43.0901
1 588 bac_23SrRNA
ID metaerg.pl|15046
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 2.00228; 19.0365; 0.66895; 21.7078; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP014226.4170.6956 1 588 evalue:0.0 qcov:100 identity:91.864;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;
>Feature NODE_376253_length_584_cov_4.27221
3 326 CDS
ID metaerg.pl|15047
genomedb_OC d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Bacteroides_A;s__Bacteroides_A sp900066445;
genomedb_acc GCA_900066445.1;
genomedb_target db:genomedb|GCA_900066445.1|SCI66281.1 2 91 evalue:6.4e-28 qcov:84.10 identity:75.60;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 5.26959; 0.285714; 1.10599; 3.87788;
6 371 bac_16SrRNA
ID metaerg.pl|15048
Name bac_16SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 5.26959; 0.285714; 1.10599; 3.87788;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JQ428009.1.1490 1 357 evalue:1.20e-164 qcov:98 identity:95.868;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Rhodothermales;Rhodothermaceae;
>Feature NODE_376391_length_584_cov_3.24575
>Feature NODE_377990_length_582_cov_3.3112
239 3 CDS
ID metaerg.pl|15049
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 6.52083; ; 6.52083;
>Feature NODE_378529_length_581_cov_17.0323
581 1 bac_23SrRNA
ID metaerg.pl|15050
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 15.6821; 9.82367; 35.9745; 15.9026; 77.3828;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FNQN01000022.2229.5186 1 580 evalue:0.0 qcov:99 identity:89.231;
rRNA_taxon Bacteria;Proteobacteria;Deltaproteobacteria;
377 580 CDS
ID metaerg.pl|15051
allgo_ids GO:0009507;
genomedb_OC d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Synechococcales;f__Cyanobiaceae;g__Prochlorococcus_B;s__Prochlorococcus_B sp003215695;
genomedb_acc GCA_003215695.1;
genomedb_target db:genomedb|GCA_003215695.1|QCJZ01000062.1_1 1 68 evalue:2.6e-19 qcov:100.00 identity:77.90;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 15.6821; 9.82367; 35.9745; 15.9026; 77.3828;
sprot_desc hypothetical protein;
sprot_id sp|Q3BAI2|YCX91_PHAAO;
sprot_target db:uniprot_sprot|sp|Q3BAI2|YCX91_PHAAO 20 68 evalue:1.2e-10 qcov:72.10 identity:73.50;
>Feature NODE_378591_length_581_cov_5.75095
456 2 bac_23SrRNA
ID metaerg.pl|15052
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.118329; 9.471; 0.436195; 8.83295; 0.0835267;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LFIK01006839.6481.9125 1 455 evalue:0.0 qcov:100 identity:95.165;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Opitutales;
>Feature NODE_379920_length_580_cov_2.14095
580 25 bac_23SrRNA
ID metaerg.pl|15054
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 4.86512; 0.67907; 0.516279; 6.72558; 0.665116;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_379235_length_580_cov_147.173
1 580 bac_16SrRNA
ID metaerg.pl|15053
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 204.226; 1.08372; 181.24; 20.0744; 1.82791;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JF727672.1.1503 1 580 evalue:0.0 qcov:100 identity:98.795;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae;Halomonas;
>Feature NODE_381562_length_578_cov_2.16252
1 498 bac_23SrRNA
ID metaerg.pl|15055
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values ; 4.30607; ; 4.30374; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP007496.122575.125684 1 495 evalue:0.0 qcov:99 identity:93.173;
rRNA_taxon Bacteria;Patescibacteria;Gracilibacteria;Candidatus Peregrinibacteria;
>Feature NODE_383423_length_575_cov_7.46538
574 1 bac_23SrRNA
ID metaerg.pl|15056
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.0235294; 11.2776; ; 0.167059; 11.0871;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP002349.2007391.2010285 1 574 evalue:0.0 qcov:100 identity:92.894;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;
>Feature NODE_383592_length_575_cov_3.40769
223 116 arc_5SrRNA
ID metaerg.pl|15057
Name arc_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 5.93882; ; 5.93882; ; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_384648_length_574_cov_2.57996
448 3 bac_23SrRNA
ID metaerg.pl|15058
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 5.83255; ; ; 5.83255; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_386754_length_571_cov_6.73256
1 571 arc_16SrRNA
ID metaerg.pl|15059
Name arc_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 8.63183; ; ; 8.6342; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JF449426.1.1481 1 571 evalue:0.0 qcov:100 identity:99.650;
rRNA_taxon Archaea;Euryarchaeota;Halobacteria;Halobacteriales;Halococcaceae;Halalkalicoccus;
191 3 CDS
ID metaerg.pl|15060
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 8.63183; ; ; 8.6342; ;
tm_num 1;
191 3 transmembrane_helix
ID metaerg.pl|15061
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 8.63183; ; ; 8.6342; ;
topology i21-89o;
>Feature NODE_389295_length_568_cov_9.84211
2 568 bac_23SrRNA
ID metaerg.pl|15064
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 49.4067; 11.6364; 12.2464; 11.1364; 14.3876;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FOAB01000015.292.3114 1 567 evalue:0.0 qcov:100 identity:87.108;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;
>Feature NODE_389591_length_568_cov_2.9883
248 537 bac_23SrRNA
ID metaerg.pl|15063
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values ; 5.48804; ; ; 5.48804;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
>Feature NODE_389431_length_568_cov_3.79337
567 1 bac_23SrRNA
ID metaerg.pl|15062
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.16507; 41.3206; 258.641; 406.844; 100.718;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CEPF01017179.24.2618 4 567 evalue:1.41e-168 qcov:99 identity:86.067;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;
>Feature NODE_390126_length_567_cov_20.2129
491 390 bac_5SrRNA
ID metaerg.pl|15065
Name bac_5SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 0.170264; 7.05036; 0.956835; 8.64748; 0.470024;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_390457_length_567_cov_3.08398
1 565 bac_23SrRNA
ID metaerg.pl|15066
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 3.64748; 7.55635; 7.28777; ; 18.4916;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP011273.2758142.2760943 1 565 evalue:0.0 qcov:100 identity:89.005;
rRNA_taxon Bacteria;Planctomycetes;Planctomycetacia;
>Feature NODE_392811_length_564_cov_4.11788
564 4 bac_23SrRNA
ID metaerg.pl|15067
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 6.81884; 26; 2.84058; 42.3285; 6.66908;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MDWE01000072.224.3233 1 561 evalue:1.38e-178 qcov:100 identity:86.874;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;
>Feature NODE_394288_length_562_cov_150.487
562 1 bac_23SrRNA
ID metaerg.pl|15068
Name bac_23SrRNA;
mdepth_cols DLM2; LCM1; PLM2; totalAvgDepth; GEM2;
mdepth_values 131.857; 1093.58; 12.2937; 1240.9; 3.16019;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP012502.3490522.3493485 1 562 evalue:0.0 qcov:100 identity:99.466;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;Sporolactobacillaceae;Salipaludibacillus;
>Feature NODE_396938_length_559_cov_59.5079
146 258 bac_5SrRNA
ID metaerg.pl|15069
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 3.83863; 69.0905; 1.48655; 1.91198; 76.3252;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
473 549 tRNA
ID metaerg.pl|15070
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 3.83863; 69.0905; 1.48655; 1.91198; 76.3252;
name tRNA_Met_cat;
>Feature NODE_398767_length_557_cov_7.5239
1 314 bac_23SrRNA
ID metaerg.pl|15071
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 11.1278; ; 11.1278; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AMZN01000126.369.3282 1 314 evalue:4.79e-126 qcov:100 identity:92.698;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;
488 557 bac_5SrRNA
ID metaerg.pl|15072
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values ; 11.1278; ; 11.1278; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_398676_length_557_cov_65.259
210 98 bac_5SrRNA
ID metaerg.pl|15073
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 35.5356; 60.2801; 15.5233; 13.484; 124.823;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
173 418 CDS
ID metaerg.pl|15074
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 35.5356; 60.2801; 15.5233; 13.484; 124.823;
tm_num 1;
173 418 transmembrane_helix
ID metaerg.pl|15075
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 35.5356; 60.2801; 15.5233; 13.484; 124.823;
topology i233-301o;
556 305 bac_23SrRNA
ID metaerg.pl|15076
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 35.5356; 60.2801; 15.5233; 13.484; 124.823;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LQBQ01000015.2665.5502 2 252 evalue:2.97e-112 qcov:99 identity:96.016;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;
>Feature NODE_399563_length_556_cov_19.8603
>Feature NODE_403065_length_552_cov_34.4085
550 47 CDS
ID metaerg.pl|15077
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 20.5746; 1.52488; 1.24378; 24.2512; 0.90796;
>Feature NODE_404785_length_550_cov_90.899
3 549 bac_23SrRNA
ID metaerg.pl|15079
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 35.27; 168.482; 39.57; 56.705; 36.9375;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AXVX01000020.3019.5994 1 546 evalue:0.0 qcov:99 identity:90.710;
rRNA_taxon Bacteria;Gemmatimonadetes;Gemmatimonadetes;Gemmatimonadales;
>Feature NODE_404776_length_550_cov_165.115
549 55 bac_23SrRNA
ID metaerg.pl|15078
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 140.67; 7.53; 23.14; 100.213; 9.7875;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FSRR01000001.2398648.2401543 1 495 evalue:0.0 qcov:100 identity:98.586;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Oceanospirillales;Halomonadaceae;Halomonas;
>Feature NODE_406586_length_548_cov_31.6653
548 1 bac_23SrRNA
ID metaerg.pl|15080
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 1.5804; 20.6432; 2.01759; 15.5327; 1.51256;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ACZO01000002.2329.5220 1 548 evalue:0.0 qcov:100 identity:99.818;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Vibrionales;Vibrionaceae;Vibrio;
>Feature NODE_409228_length_545_cov_49.349
1 545 bac_23SrRNA
ID metaerg.pl|15081
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 2.43038; 3.32658; 54.243; 4.2; 64.2;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LCWZ01001825.113.2262 1 545 evalue:0.0 qcov:100 identity:94.128;
rRNA_taxon Bacteria;Firmicutes;Clostridia;Clostridiales;
>Feature NODE_410074_length_544_cov_141.413
3 449 CDS
ID metaerg.pl|15083
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 3.2335; 1.48985; 278.193; 5.40102; 288.317;
>Feature NODE_410078_length_544_cov_102.276
1 544 bac_16SrRNA
ID metaerg.pl|15082
Name bac_16SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 2.12944; 401.739; 0.634518; 4.19797; 408.701;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KC912773.1.1473 1 544 evalue:0.0 qcov:100 identity:99.632;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Nostocales;Nostocaceae;Nodularia PCC-9350;
>Feature NODE_410953_length_543_cov_145.459
1 543 bac_16SrRNA
ID metaerg.pl|15084
Name bac_16SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 1552.72; 1010.93; 932.794; 945.071; 4441.51;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|KF246481.1.1412 1 543 evalue:0.0 qcov:100 identity:99.079;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Phormidesmiales;Nodosilineaceae;Nodosilinea PCC-7104;
>Feature NODE_410955_length_543_cov_131.412
543 230 bac_16SrRNA
ID metaerg.pl|15085
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 15.8295; 1.11705; 13.2875; 0.323155; 1.10178;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FJ764788.1.1538 13 314 evalue:3.79e-139 qcov:96 identity:96.358;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Idiomarinaceae;
541 329 CDS
ID metaerg.pl|15086
genomedb_OC d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Escherichia;s__Escherichia dysenteriae;
genomedb_acc GCA_002949675.1;
genomedb_target db:genomedb|GCA_002949675.1|CP026774.1_2006 1 69 evalue:4.3e-25 qcov:98.60 identity:88.40;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 15.8295; 1.11705; 13.2875; 0.323155; 1.10178;
>Feature NODE_413831_length_540_cov_25.5711
155 54 bac_5SrRNA
ID metaerg.pl|15088
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.730769; 56; 0.720513; 16.9667; 37.5821;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_413793_length_540_cov_92.266
540 3 bac_23SrRNA
ID metaerg.pl|15087
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 161.174; 17.6744; ; 178.849;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CP001791.2937183.2940116 1 538 evalue:0.0 qcov:100 identity:93.135;
rRNA_taxon Bacteria;Firmicutes;Bacilli;Bacillales;
>Feature NODE_416670_length_537_cov_19.4813
3 398 CDS
ID metaerg.pl|15089
genomedb_OC d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Rhizobiaceae;g__Allorhizobium;s__Allorhizobium sp900473245;
genomedb_acc GCA_900473245.1;
genomedb_target db:genomedb|GCA_900473245.1|UCKY01000019.1_1 3 131 evalue:6.7e-11 qcov:98.50 identity:38.60;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 14.6072; ; 14.6072;
428 5 bac_23SrRNA
ID metaerg.pl|15090
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; ; 14.6072; ; 14.6072;
rRNA_target rRNA_target=db:silva_LSURef.fasta|JMIH01000045.101.2996 3 424 evalue:2.93e-159 qcov:99 identity:90.824;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;
>Feature NODE_418658_length_535_cov_12.7604
1 535 euk_28SrRNA
ID metaerg.pl|15091
Name euk_28SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values 0.444156; 1.66234; 8.14805; 0.851948; 11.1065;
rRNA_target rRNA_target=db:silva_LSURef.fasta|DQ273815.1.3180 1 535 evalue:0.0 qcov:100 identity:93.358;
rRNA_taxon Eukaryota;Opisthokonta;Nucletmycea;Fungi;
>Feature NODE_419491_length_534_cov_65.3382
1 534 bac_23SrRNA
ID metaerg.pl|15092
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values 24.9141; 30.6719; 75.5599; 3.88542; 135.031;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ALWO02000007.30.2959 1 534 evalue:0.0 qcov:100 identity:98.127;
rRNA_taxon Bacteria;Bacteroidetes;Bacteroidia;Cytophagales;Cyclobacteriaceae;Indibacter;
>Feature NODE_421224_length_533_cov_2.07322
116 533 euk_18SrRNA
ID metaerg.pl|15093
Name euk_18SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 3.37076; ; ; 3.37076; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FR874828.1.1704 2 418 evalue:3.95e-145 qcov:99 identity:89.234;
rRNA_taxon Eukaryota;SAR;Alveolata;
>Feature NODE_421407_length_532_cov_48.1992
>Feature NODE_422235_length_532_cov_1.80294
1 532 bac_23SrRNA
ID metaerg.pl|15094
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; LCM1; DLM2;
mdepth_values 0.735602; 10.1597; 3.78534; 4.19895; 1.43979;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LFIK01006839.6481.9125 1 532 evalue:0.0 qcov:100 identity:94.382;
rRNA_taxon Bacteria;Verrucomicrobia;Verrucomicrobiae;Opitutales;
>Feature NODE_421413_length_532_cov_40.9266
532 2 bac_23SrRNA
ID metaerg.pl|15095
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 589.458; 155.639; 129.301; 67.911; 236.61;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MDWE01000072.224.3233 1 531 evalue:0.0 qcov:100 identity:97.552;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Balneolales;Balneolaceae;Rhodohalobacter;
>Feature NODE_424409_length_529_cov_13.6962
377 273 bac_5SrRNA
ID metaerg.pl|15096
Name bac_5SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 14.4829; 34.3826; 5.14248; 0.815303; 13.942;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_424371_length_529_cov_34.1287
>Feature NODE_426393_length_527_cov_13.9131
156 81 tRNA
ID metaerg.pl|15097
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.0345; 1.85146; 0.472149; 10.3926; 1.3183;
name tRNA_Met_cat;
336 248 tRNA
ID metaerg.pl|15098
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.0345; 1.85146; 0.472149; 10.3926; 1.3183;
name tRNA_Leu_taa;
417 343 tRNA
ID metaerg.pl|15099
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.0345; 1.85146; 0.472149; 10.3926; 1.3183;
name tRNA_Asn_gtt;
527 428 bac_5SrRNA
ID metaerg.pl|15100
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 14.0345; 1.85146; 0.472149; 10.3926; 1.3183;
rRNA_target rRNA_target=db:silva_LSURef.fasta|CXYX01000012.1.2987 1 100 evalue:2.42e-24 qcov:100 identity:87.000;
rRNA_taxon Bacteria;Firmicutes;Clostridia;
>Feature NODE_426844_length_527_cov_2.58686
131 238 bac_5SrRNA
ID metaerg.pl|15101
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 7; 1.27851; ; 4.75332; 0.96817;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
526 335 CDS
ID metaerg.pl|15102
genomedb_OC d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lutisporales;f__Lutisporaceae;g__BRH-c25;s__BRH-c25 sp001515955;
genomedb_acc GCA_001515955.1;
genomedb_target db:genomedb|GCA_001515955.1|KUO74359.1 1 63 evalue:4.3e-08 qcov:100.00 identity:57.10;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 7; 1.27851; ; 4.75332; 0.96817;
>Feature NODE_428298_length_525_cov_17.8745
229 523 bac_16SrRNA
ID metaerg.pl|15103
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 26.784; ; 26.4027; 0.381333; ;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|LATF01000007.663066.664566 5 295 evalue:6.05e-122 qcov:99 identity:93.857;
rRNA_taxon Bacteria;Actinobacteria;Nitriliruptoria;Nitriliruptorales;
>Feature NODE_429627_length_524_cov_3.52665
524 1 bac_23SrRNA
ID metaerg.pl|15104
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 5.14438; 10.5401; 11.5695; 28.3209; 1.06684;
rRNA_target rRNA_target=db:silva_LSURef.fasta|AUDH01000009.1.2221 1 524 evalue:0.0 qcov:100 identity:95.802;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Acetobacterales;Acetobacteraceae;
320 69 CDS
ID metaerg.pl|15105
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 5.14438; 10.5401; 11.5695; 28.3209; 1.06684;
>Feature NODE_429379_length_524_cov_70.7804
287 212 tRNA
ID metaerg.pl|15106
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 35.5187; 16.7086; 24.1123; 118.572; 42.2353;
name tRNA_Ala_tgc;
371 295 tRNA
ID metaerg.pl|15107
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 35.5187; 16.7086; 24.1123; 118.572; 42.2353;
name tRNA_Ile_gat;
>Feature NODE_431638_length_522_cov_3.33619
1 522 bac_23SrRNA
ID metaerg.pl|15108
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 9.30645; 0.357527; 5.86022; 1.92742; 1.16129;
rRNA_target RNA_target=db:silva_LSURef.fasta|novalid;
rRNA_taxon unknown;
520 290 CDS
ID metaerg.pl|15109
genomedb_OC d__Bacteria;p__Patescibacteria;c__Gracilibacteria;o__BD1-5;f__UBA6164;g__UBA5194;s__UBA5194 sp002412935;
genomedb_acc GCA_002412935.1;
genomedb_target db:genomedb|GCA_002412935.1|DHWA01000013.1_126 1 76 evalue:5.4e-13 qcov:100.00 identity:56.00;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 9.30645; 0.357527; 5.86022; 1.92742; 1.16129;
>Feature NODE_432331_length_521_cov_103.3
521 1 bac_16SrRNA
ID metaerg.pl|15110
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 47.5876; 3.80863; 35.9865; 5.22911; 2.56334;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|EU037322.1.1402 1 521 evalue:0.0 qcov:100 identity:99.424;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhizobiales;Rhizobiaceae;Chelativorans;
>Feature NODE_433745_length_520_cov_3.21935
>Feature NODE_433627_length_520_cov_3.75914
2 510 bac_23SrRNA
ID metaerg.pl|15111
Name bac_23SrRNA;
mdepth_cols PLM2; DLM2; LCM1; GEM2; totalAvgDepth;
mdepth_values ; 0.616216; 6.43784; ; 7.05405;
rRNA_target rRNA_target=db:silva_LSURef.fasta|KJ746599.76238.79132 1 509 evalue:0.0 qcov:100 identity:97.053;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Chloroplast;
>Feature NODE_434470_length_519_cov_61.5172
1 308 bac_23SrRNA
ID metaerg.pl|15112
Name bac_23SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 192.011; 56.6694; 37.8943; 330.095; 43.5203;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LFFM01007211.2641.5474 1 308 evalue:9.73e-153 qcov:100 identity:98.377;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;
464 519 bac_5SrRNA
ID metaerg.pl|15113
Name bac_5SrRNA;
mdepth_cols LCM1; DLM2; PLM2; totalAvgDepth; GEM2;
mdepth_values 192.011; 56.6694; 37.8943; 330.095; 43.5203;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_435937_length_518_cov_3.0216
70 1 bac_5SrRNA
ID metaerg.pl|15114
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 5.47554; ; ; 5.47554; ;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_439107_length_515_cov_2.71739
97 515 bac_23SrRNA
ID metaerg.pl|15115
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 0.594521; 5.48767; ; ; 4.89589;
rRNA_target rRNA_target=db:silva_LSURef.fasta|ADGO01001458.386.2696 47 419 evalue:1.82e-126 qcov:89 identity:89.037;
rRNA_taxon Bacteria;Patescibacteria;Gracilibacteria;
>Feature NODE_439587_length_514_cov_52.4553
514 2 CDS
ID metaerg.pl|15116
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 61.5714; ; 0.799451; 57.7253; 3.0467;
347 458 bac_5SrRNA
ID metaerg.pl|15117
Name bac_5SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 61.5714; ; 0.799451; 57.7253; 3.0467;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
>Feature NODE_440847_length_513_cov_4.02183
>Feature NODE_440613_length_513_cov_52
1 468 bac_16SrRNA
ID metaerg.pl|15118
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 161.802; 29.1791; 83.1047; 14.9118; 34.6061;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|JN177967.1.1475 1 455 evalue:0.0 qcov:97 identity:95.662;
rRNA_taxon Bacteria;Chloroflexi;Chloroflexia;Thermomicrobiales;Thermomicrobiaceae;
512 330 CDS
ID metaerg.pl|15119
genomedb_OC d__Bacteria;p__Actinobacteriota;c__Actinobacteria;o__Mycobacteriales;f__Pseudonocardiaceae;g__Goodfellowiella;s__Goodfellowiella coeruleoviolacea;
genomedb_acc GCA_000715825.1;
genomedb_target db:genomedb|GCA_000715825.1|KL570782.1_1 13 60 evalue:5.8e-10 qcov:80.00 identity:68.80;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 161.802; 29.1791; 83.1047; 14.9118; 34.6061;
>Feature NODE_441769_length_512_cov_19.3392
203 511 bac_16SrRNA
ID metaerg.pl|15120
Name bac_16SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 9.35912; ; 8.16851; 0.381215; 0.809392;
rRNA_target rRNA_target=db:silva_SSURef_Nr99.fasta|FOYW01000006.3984.5522 5 309 evalue:1.72e-142 qcov:99 identity:96.721;
rRNA_taxon Bacteria;Proteobacteria;Gammaproteobacteria;Alteromonadales;Marinobacteraceae;
>Feature NODE_442770_length_511_cov_101.276
1 510 bac_23SrRNA
ID metaerg.pl|15121
Name bac_23SrRNA;
mdepth_cols GEM2; totalAvgDepth; PLM2; DLM2; LCM1;
mdepth_values 44.1607; 309.906; 60.1385; 71.0305; 134.576;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FBYC01000004.2628371.2631035 1 510 evalue:0.0 qcov:100 identity:91.068;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;
>Feature NODE_444082_length_510_cov_4.1033
510 1 bac_23SrRNA
ID metaerg.pl|15122
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 7.22222; ; ; 7.22222; ;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LODP01000238.28516.31518 1 510 evalue:0.0 qcov:100 identity:98.043;
rRNA_taxon Bacteria;Cyanobacteria;Oxyphotobacteria;Chloroplast;
>Feature NODE_446295_length_508_cov_3.65784
114 3 bac_5SrRNA
ID metaerg.pl|15123
Name bac_5SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 7.14804; ; ; 7.14804;
rRNA_target RNA_target=db:silva_LSURef.fasta|nohit;
rRNA_taxon unknown;
508 203 bac_23SrRNA
ID metaerg.pl|15124
Name bac_23SrRNA;
mdepth_cols PLM2; LCM1; DLM2; GEM2; totalAvgDepth;
mdepth_values ; 7.14804; ; ; 7.14804;
rRNA_target rRNA_target=db:silva_LSURef.fasta|LKNB01000003.20125.23077 3 306 evalue:3.76e-97 qcov:99 identity:87.829;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;
>Feature NODE_450456_length_504_cov_36.196
2 504 bac_23SrRNA
ID metaerg.pl|15125
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; DLM2; LCM1; PLM2;
mdepth_values 162.893; 42.4689; 22.435; 23.4605; 74.5283;
rRNA_target rRNA_target=db:silva_LSURef.fasta|MDWE01000072.224.3233 2 503 evalue:0.0 qcov:99 identity:93.028;
rRNA_taxon Bacteria;Bacteroidetes;Rhodothermia;Balneolales;
>Feature NODE_452258_length_503_cov_2.3192
>Feature NODE_451534_length_503_cov_87.9576
502 1 bac_23SrRNA
ID metaerg.pl|15126
Name bac_23SrRNA;
mdepth_cols totalAvgDepth; GEM2; LCM1; DLM2; PLM2;
mdepth_values 628.756; 57.8499; 274.295; 200.365; 96.2465;
rRNA_target rRNA_target=db:silva_LSURef.fasta|FNOB01000054.389.3256 1 502 evalue:0.0 qcov:100 identity:96.414;
rRNA_taxon Bacteria;Proteobacteria;Alphaproteobacteria;Rhodobacterales;Rhodobacteraceae;